BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 002975
         (861 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|296083564|emb|CBI23556.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score = 1284 bits (3322), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 614/818 (75%), Positives = 690/818 (84%)

Query: 44  EPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSL 103
           EPL NRLI  L+ GR+  A  TLDLMTQ+   PDL TYS+LLKSCIR RNF LGKLVH  
Sbjct: 10  EPLKNRLIRQLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRK 69

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
           L +S LE +SV+LN+LISLYSKCGD   A  IF+ MGNKRD+VSWS+M+S + N   +  
Sbjct: 70  LMQSGLELDSVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQ 129

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           AI  F++MLELGF PNEYCF+AVIRACSN     +G IIYGF++K GY ++DVCVGC LI
Sbjct: 130 AIWTFLDMLELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELI 189

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           DMFVKGS DL SAYKVFDKM E+N V WTLMITR  QLGC RDAI LFLDM LSG++PDR
Sbjct: 190 DMFVKGSGDLGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDR 249

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           FT S V+SAC+EL L   GKQLHS  IR GLALDVCVGCSLVDMYAKC  DGSVDDSRKV
Sbjct: 250 FTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKV 309

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F++M +HNVMSWTAIIT YVQSG  DKEA++LF  MI G + PNHF+F+SVLKACGNL D
Sbjct: 310 FEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSD 369

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
               EQVY++AVK G A  +CVGNSLISMYARSGRMEDARKAF+ LFEKNLVSYN +VD 
Sbjct: 370 PYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDG 429

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           YAKNL SE+AF L +EI DTG+G SA+TFASLLSGA+SIGA+GKGEQIH R++K G++SN
Sbjct: 430 YAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSN 489

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
            CI NALISMYSRC N+EAAFQVF EMEDRNVISWTSMITGFAKHGFA RALE+F+KML 
Sbjct: 490 QCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLE 549

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
            G KPN ITY+AVLSACSH G+ISEG KHF SMY EHGIV RMEHYACMVDLLGRSG L 
Sbjct: 550 TGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLV 609

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           EA+EFI SMPL AD LVWRT LGACRVHG+TELG+HAAEMILEQ+P DPAA+ILLSNL+A
Sbjct: 610 EAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHA 669

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
           SAG W+ V  IRK MKERNLIKEAGCSWIE +N+VH+FHVGETSHP+  +IY ELDQLA 
Sbjct: 670 SAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLAS 729

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           KIKE GY+PDT+FVLH++EEEQK Q+LFQHSEKIAVAFGLISTS+SKPIR+FKNLRVCGD
Sbjct: 730 KIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGD 789

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CHTAIKYISM TGREIV+RDSNRFHHIK+G CSCNDYW
Sbjct: 790 CHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 827


>gi|359497798|ref|XP_003635646.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 809

 Score = 1270 bits (3286), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 607/809 (75%), Positives = 683/809 (84%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            L+ GR+  A  TLDLMTQ+   PDL TYS+LLKSCIR RNF LGKLVH  L +S LE +
Sbjct: 1   QLDVGRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELD 60

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           SV+LN+LISLYSKCGD   A  IF+ MGNKRD+VSWS+M+S + N   +  AI  F++ML
Sbjct: 61  SVVLNTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMEWQAIWTFLDML 120

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           ELGF PNEYCF+AVIRACSN     +G IIYGF++K GY ++DVCVGC LIDMFVKGS D
Sbjct: 121 ELGFYPNEYCFAAVIRACSNANYAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGD 180

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L SAYKVFDKM E+N V WTLMITR  QLGC RDAI LFLDM LSG++PDRFT S V+SA
Sbjct: 181 LGSAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSA 240

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+EL L   GKQLHS  IR GLALDVCVGCSLVDMYAKC  DGSVDDSRKVF++M +HNV
Sbjct: 241 CTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNV 300

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           MSWTAIIT YVQSG  DKEA++LF  MI G + PNHF+F+SVLKACGNL D    EQVY+
Sbjct: 301 MSWTAIITAYVQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYS 360

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +AVK G A  +CVGNSLISMYARSGRMEDARKAF+ LFEKNLVSYN +VD YAKNL SE+
Sbjct: 361 YAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEE 420

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           AF L +EI DTG+G SA+TFASLLSGA+SIGA+GKGEQIH R++K G++SN CI NALIS
Sbjct: 421 AFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALIS 480

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MYSRC N+EAAFQVF EMEDRNVISWTSMITGFAKHGFA RALE+F+KML  G KPN IT
Sbjct: 481 MYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEIT 540

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           Y+AVLSACSH G+ISEG KHF SMY EHGIV RMEHYACMVDLLGRSG L EA+EFI SM
Sbjct: 541 YVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSM 600

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           PL AD LVWRT LGACRVHG+TELG+HAAEMILEQ+P DPAA+ILLSNL+ASAG W+ V 
Sbjct: 601 PLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVV 660

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            IRK MKERNLIKEAGCSWIE +N+VH+FHVGETSHP+  +IY ELDQLA KIKE GY+P
Sbjct: 661 KIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIP 720

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           DT+FVLH++EEEQK Q+LFQHSEKIAVAFGLISTS+SKPIR+FKNLRVCGDCHTAIKYIS
Sbjct: 721 DTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYIS 780

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           M TGREIV+RDSNRFHHIK+G CSCNDYW
Sbjct: 781 MATGREIVVRDSNRFHHIKNGVCSCNDYW 809


>gi|449467092|ref|XP_004151259.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Cucumis sativus]
          Length = 849

 Score = 1216 bits (3147), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 569/850 (66%), Positives = 692/850 (81%), Gaps = 4/850 (0%)

Query: 12  IPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQ 71
           +P P++ K   PS         P F    T   PL+ RLI  +N+GR+ KAI TL+ M  
Sbjct: 4   LPLPTTLKIPFPSSNPSSSLQFPTF----TNPNPLTGRLIQEINNGRLHKAISTLEHMVH 59

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           +G+HPDL TYSL LK CIR+R+F +G LVH  LT+S L+ +SV LNSLISLYSKCG   +
Sbjct: 60  QGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEK 119

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A  IF+ MG+ RD++SWS+M+S + N      A+  FV+M+E G+ PNEYCF+A  RACS
Sbjct: 120 ATSIFQLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS 179

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
             E V++G  I+GF++K GY  SDVCVGC LIDMFVKG  DL SA+KVF+KM E+N V W
Sbjct: 180 TAEFVSVGDSIFGFVVKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTW 239

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
           TLMITR  Q G   +AI LFL+MILSG+ PDRFTLSGV+SAC+ +EL   G+QLHS AIR
Sbjct: 240 TLMITRLMQFGYAGEAIDLFLEMILSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR 299

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            GL LD CVGC L++MYAKC+VDGS+  +RK+FD++LDHNV SWTA+ITGYVQ GG D+E
Sbjct: 300 HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEE 359

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A+ LF  MI   V PNHFTF+S LKAC NL    + EQV+THAVK G +  +CV NSLIS
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYARSGR++DARKAF+ LFEKNL+SYNT++DAYAKNLNSE+A EL +EIED G+G SA+T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           FASLLSGA+SIG IGKGEQIHAR+IKSG + N  + NALISMYSRC N+E+AFQVF++ME
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME 539

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           DRNVISWTS+ITGFAKHGFA +ALE+F+KML +G++PN +TYIAVLSACSH GL++EGWK
Sbjct: 540 DRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNLVTYIAVLSACSHVGLVNEGWK 599

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           HF+SMY EHG++ RMEHYACMVD+LGRSGSL+EA++FI SMP  AD LVWRTFLGACRVH
Sbjct: 600 HFKSMYTEHGVIPRMEHYACMVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVH 659

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
           G+ ELGKHAA+MI+EQ+P DPAA+ILLSNLYAS   W+ V+NIRK MKE+NLIKEAGCSW
Sbjct: 660 GNLELGKHAAKMIIEQEPHDPAAYILLSNLYASTSKWDEVSNIRKAMKEKNLIKEAGCSW 719

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           +E +NKVHKF+VG+TSHPK  EIY EL  L++KIK+ GY+P+ +FVLH++EEEQK + LF
Sbjct: 720 VEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLF 779

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
           QHSEKIAVAFGLISTSK KPIRVFKNLR+CGDCH+AIKYISM TGREI++RD+NRFHHIK
Sbjct: 780 QHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIK 839

Query: 852 DGKCSCNDYW 861
           DG+CSCN+YW
Sbjct: 840 DGRCSCNEYW 849


>gi|449514605|ref|XP_004164425.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49170, chloroplastic-like [Cucumis sativus]
          Length = 849

 Score = 1212 bits (3137), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 567/850 (66%), Positives = 690/850 (81%), Gaps = 4/850 (0%)

Query: 12  IPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQ 71
           +P P++ K   PS         P F    T   PL+ RLI  +N+GR+ KAI TL+ M  
Sbjct: 4   LPLPTTLKIPFPSSNPSSSLQFPTF----TNPNPLTGRLIQEINNGRLHKAISTLEHMVH 59

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           +G+HPDL TYSL LK CIR+R+F +G LVH  LT+S L+ +SV LNSLISLYSKCG   +
Sbjct: 60  QGSHPDLQTYSLFLKKCIRTRSFDIGTLVHEKLTQSDLQLDSVTLNSLISLYSKCGQWEK 119

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A  IF+ MG+ RD++SWS+M+S + N      A+  FV+M+E G+ PNEYCF+A  RACS
Sbjct: 120 ATSIFRLMGSSRDLISWSAMVSCFANNNMGFRALLTFVDMIENGYYPNEYCFAAATRACS 179

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
             E V++G  I+GF++K GY  SDVCVGC LIDMFVKG  DL SA+KVF+KM E+N V W
Sbjct: 180 TAEFVSVGDSIFGFVIKTGYLQSDVCVGCGLIDMFVKGRGDLVSAFKVFEKMPERNAVTW 239

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
           TLMITR  Q G   +AI LFLDMI SG+ PDRFTLSGV+SAC+ +EL   G+QLHS AIR
Sbjct: 240 TLMITRLMQFGYAGEAIDLFLDMIFSGYEPDRFTLSGVISACANMELLLLGQQLHSQAIR 299

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            GL LD CVGC L++MYAKC+VDGS+  +RK+FD++LDHNV SWTA+ITGYVQ GG D+E
Sbjct: 300 HGLTLDRCVGCCLINMYAKCSVDGSMCAARKIFDQILDHNVFSWTAMITGYVQKGGYDEE 359

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A+ LF  MI   V PNHFTF+S LKAC NL    + EQV+THAVK G +  +CV NSLIS
Sbjct: 360 ALDLFRGMILTHVIPNHFTFSSTLKACANLAALRIGEQVFTHAVKLGFSSVNCVANSLIS 419

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYARSGR++DARKAF+ LFEKNL+SYNT++DAYAKNLNSE+A EL +EIED G+G SA+T
Sbjct: 420 MYARSGRIDDARKAFDILFEKNLISYNTVIDAYAKNLNSEEALELFNEIEDQGMGASAFT 479

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           FASLLSGA+SIG IGKGEQIHAR+IKSG + N  + NALISMYSRC N+E+AFQVF++ME
Sbjct: 480 FASLLSGAASIGTIGKGEQIHARVIKSGLKLNQSVCNALISMYSRCGNIESAFQVFEDME 539

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           DRNVISWTS+ITGFAKHGFA +ALE+F+KML +G++PN +TYIAVLSACSH GL++EGWK
Sbjct: 540 DRNVISWTSIITGFAKHGFATQALELFHKMLEEGVRPNEVTYIAVLSACSHVGLVNEGWK 599

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           HF+SMY EHG++ RMEHYAC+VD+LGRSGSL+EA++FI SMP  AD LVWRTFLGACRVH
Sbjct: 600 HFKSMYTEHGVIPRMEHYACIVDILGRSGSLSEAIQFINSMPYKADALVWRTFLGACRVH 659

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
           G+ ELGKHAA+MI+EQ+P DPAA+ILLSNLYAS   W+ V+NIRK MKE+ LIKEAGCSW
Sbjct: 660 GNLELGKHAAKMIIEQEPHDPAAYILLSNLYASISKWDEVSNIRKAMKEKXLIKEAGCSW 719

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           +E +NKVHKF+VG+TSHPK  EIY EL  L++KIK+ GY+P+ +FVLH++EEEQK + LF
Sbjct: 720 VEVENKVHKFYVGDTSHPKAAEIYDELQNLSVKIKKLGYVPNLDFVLHDVEEEQKEKLLF 779

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
           QHSEKIAVAFGLISTSK KPIRVFKNLR+CGDCH+AIKYISM TGREI++RD+NRFHHIK
Sbjct: 780 QHSEKIAVAFGLISTSKMKPIRVFKNLRICGDCHSAIKYISMATGREIIVRDANRFHHIK 839

Query: 852 DGKCSCNDYW 861
           DG+CSCN+YW
Sbjct: 840 DGRCSCNEYW 849


>gi|224132926|ref|XP_002321443.1| predicted protein [Populus trichocarpa]
 gi|222868439|gb|EEF05570.1| predicted protein [Populus trichocarpa]
          Length = 723

 Score = 1137 bits (2942), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 541/723 (74%), Positives = 615/723 (85%)

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           MGNKRD+VSWS++IS Y N  K  +AI  F +MLE GF PNEYCF+ V RACSN EN+++
Sbjct: 1   MGNKRDLVSWSALISCYANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISL 60

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G II+GFLLK GYF+SDVCVGCALIDMFVKG+ DLESAYKVFD+M ++N V WTLMITR 
Sbjct: 61  GKIIFGFLLKTGYFESDVCVGCALIDMFVKGNGDLESAYKVFDRMPDRNVVTWTLMITRF 120

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            QLG  RDA+ LFLDM+LSG++PDRFTLSGVVSAC+E+ L + G+Q H   +++GL LDV
Sbjct: 121 QQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSGLDLDV 180

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
           CVGCSLVDMYAKC  DGSVDD+RKVFDRM  HNVMSWTAIITGYVQSGG D+EA++LF +
Sbjct: 181 CVGCSLVDMYAKCVADGSVDDARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLE 240

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M+QGQV PNHFTF+SVLKAC NL D  + EQVY   VK   A  +CVGNSLISMY+R G 
Sbjct: 241 MVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRCGN 300

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ME+ARKAF+ LFEKNLVSYNT+V+AYAK+LNSE+AFEL +EIE  G G +A+TFASLLSG
Sbjct: 301 MENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEIEGAGTGVNAFTFASLLSG 360

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
           ASSIGAIGKGEQIH+RI+KSGF+SN  I NALISMYSRC N+EAAFQVF EM D NVISW
Sbjct: 361 ASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISW 420

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           TSMITGFAKHGFA RALE F+KML  G+ PN +TYIAVLSACSH GLISEG KHF+SM  
Sbjct: 421 TSMITGFAKHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKV 480

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           EHGIV RMEHYAC+VDLLGRSG L EA+E + SMP  AD LV RTFLGACRVHG+ +LGK
Sbjct: 481 EHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKADALVLRTFLGACRVHGNMDLGK 540

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
           HAAEMILEQDP DPAA+ILLSNL+ASAG WE VA IRK+MKERNL KEAGCSWIE +NKV
Sbjct: 541 HAAEMILEQDPHDPAAYILLSNLHASAGQWEEVAEIRKKMKERNLTKEAGCSWIEVENKV 600

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           HKF+VG+TSHP+  EIY ELDQLALKIKE GY+P T+FVLH++EEEQK QYLFQHSEKIA
Sbjct: 601 HKFYVGDTSHPQAQEIYDELDQLALKIKELGYIPSTDFVLHDVEEEQKEQYLFQHSEKIA 660

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           VA+G ISTS S+PIRVFKNLRVCGDCHTA KY S+V  +EIVLRD+NRFHH KDG CSCN
Sbjct: 661 VAYGFISTSTSRPIRVFKNLRVCGDCHTAFKYFSIVRRKEIVLRDANRFHHFKDGTCSCN 720

Query: 859 DYW 861
           DYW
Sbjct: 721 DYW 723



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 284/506 (56%), Gaps = 16/506 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK-LEP 111
           + N+ +  +AI     M + G +P+   ++ + ++C    N  LGK++   L ++   E 
Sbjct: 17  YANNEKAFEAISAFFDMLECGFYPNEYCFTGVFRACSNKENISLGKIIFGFLLKTGYFES 76

Query: 112 NSVILNSLISLYSKC-GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           +  +  +LI ++ K  GDL  A K+F  M + R++V+W+ MI+ +   G   DA+ +F++
Sbjct: 77  DVCVGCALIDMFVKGNGDLESAYKVFDRMPD-RNVVTWTLMITRFQQLGFSRDAVDLFLD 135

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-- 228
           M+  G+ P+ +  S V+ AC+    +++G   +  ++K G  D DVCVGC+L+DM+ K  
Sbjct: 136 MVLSGYVPDRFTLSGVVSACAEMGLLSLGRQFHCLVMKSG-LDLDVCVGCSLVDMYAKCV 194

Query: 229 --GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL-GCPRDAIRLFLDMILSGFLPDRFT 285
             GSVD   A KVFD+M   N + WT +IT   Q  GC R+AI LFL+M+     P+ FT
Sbjct: 195 ADGSVD--DARKVFDRMPVHNVMSWTAIITGYVQSGGCDREAIELFLEMVQGQVKPNHFT 252

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
            S V+ AC+ L     G+Q+++  ++  LA   CVG SL+ MY++C   G+++++RK FD
Sbjct: 253 FSSVLKACANLSDIWLGEQVYALVVKMRLASINCVGNSLISMYSRC---GNMENARKAFD 309

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            + + N++S+  I+  Y +S   + EA +LF+++       N FTFAS+L    ++    
Sbjct: 310 VLFEKNLVSYNTIVNAYAKSLNSE-EAFELFNEIEGAGTGVNAFTFASLLSGASSIGAIG 368

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             EQ+++  +K G   +  + N+LISMY+R G +E A + F  + + N++S+ +M+  +A
Sbjct: 369 KGEQIHSRILKSGFKSNLHICNALISMYSRCGNIEAAFQVFNEMGDGNVISWTSMITGFA 428

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNH 524
           K+  + +A E  H++ + GV  +  T+ ++LS  S +G I +G +   +  ++ G     
Sbjct: 429 KHGFATRALETFHKMLEAGVSPNEVTYIAVLSACSHVGLISEGLKHFKSMKVEHGIVPRM 488

Query: 525 CIYNALISMYSRCANVEAAFQVFKEM 550
             Y  ++ +  R  ++E A ++   M
Sbjct: 489 EHYACVVDLLGRSGHLEEAMELVNSM 514



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 233/431 (54%), Gaps = 19/431 (4%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDL------MTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
           P  N + + L   R Q+  F+ D       M   G  PD  T S ++ +C       LG+
Sbjct: 106 PDRNVVTWTLMITRFQQLGFSRDAVDLFLDMVLSGYVPDRFTLSGVVSACAEMGLLSLGR 165

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKC---GDLNEANKIFKSMGNKRDIVSWSSMISSY 155
             H L+ +S L+ +  +  SL+ +Y+KC   G +++A K+F  M    +++SW+++I+ Y
Sbjct: 166 QFHCLVMKSGLDLDVCVGCSLVDMYAKCVADGSVDDARKVFDRM-PVHNVMSWTAIITGY 224

Query: 156 VNRGK-QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           V  G    +AI +F+EM++    PN + FS+V++AC+N  ++ +G  +Y  ++K     S
Sbjct: 225 VQSGGCDREAIELFLEMVQGQVKPNHFTFSSVLKACANLSDIWLGEQVYALVVKM-RLAS 283

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
             CVG +LI M+ +   ++E+A K FD + EKN V +  ++    +     +A  LF ++
Sbjct: 284 INCVGNSLISMYSRCG-NMENARKAFDVLFEKNLVSYNTIVNAYAKSLNSEEAFELFNEI 342

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             +G   + FT + ++S  S +     G+Q+HS  +++G   ++ +  +L+ MY++C   
Sbjct: 343 EGAGTGVNAFTFASLLSGASSIGAIGKGEQIHSRILKSGFKSNLHICNALISMYSRC--- 399

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G+++ + +VF+ M D NV+SWT++ITG+ + G   + A++ F  M++  V+PN  T+ +V
Sbjct: 400 GNIEAAFQVFNEMGDGNVISWTSMITGFAKHGFATR-ALETFHKMLEAGVSPNEVTYIAV 458

Query: 395 LKACGNL-LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEK 452
           L AC ++ L S   +   +  V+ G          ++ +  RSG +E+A +   S+ F+ 
Sbjct: 459 LSACSHVGLISEGLKHFKSMKVEHGIVPRMEHYACVVDLLGRSGHLEEAMELVNSMPFKA 518

Query: 453 NLVSYNTMVDA 463
           + +   T + A
Sbjct: 519 DALVLRTFLGA 529


>gi|30693150|ref|NP_190486.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75222188|sp|Q5G1T1.1|PP272_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g49170, chloroplastic; AltName: Full=Protein EMBRYO
           DEFECTIVE 2261; Flags: Precursor
 gi|58013018|gb|AAW62962.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|58013020|gb|AAW62963.1| embryo-defective 2261 [Arabidopsis thaliana]
 gi|332644986|gb|AEE78507.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score = 1105 bits (2857), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 538/870 (61%), Positives = 670/870 (77%), Gaps = 31/870 (3%)

Query: 1   MMTLSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRV 59
           M++ S P+PAK+P  S  +PS  +R N                  +++RLI  HLN G +
Sbjct: 3   MISFSFPSPAKLPIKS--QPSVSNRIN------------------VADRLILRHLNAGDL 42

Query: 60  QKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           + A+  LDLM + G  P D  T+S LLKSCIR+R+F LGKLVH+ L    +EP+SV+ NS
Sbjct: 43  RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102

Query: 119 LISLYSKCGDLNEANKIFKSMG--NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           LISLYSK GD  +A  +F++M    KRD+VSWS+M++ Y N G+++DAI +FVE LELG 
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN+YC++AVIRACSN++ V +G +  GFL+K G+F+SDVCVGC+LIDMFVKG    E+A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           YKVFDKM+E N V WTLMITRC Q+G PR+AIR FLDM+LSGF  D+FTLS V SAC+EL
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E  + GKQLHSWAIR+GL  D  V CSLVDMYAKC+ DGSVDD RKVFDRM DH+VMSWT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           A+ITGY+++     EA+ LFS+MI QG V PNHFTF+S  KACGNL D  V +QV   A 
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           KRG A +  V NS+ISM+ +S RMEDA++AFESL EKNLVSYNT +D   +NLN E+AF+
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           LL EI +  +G SA+TFASLLSG +++G+I KGEQIH++++K G   N  + NALISMYS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C +++ A +VF  ME+RNVISWTSMITGFAKHGFA R LE F +M+ +G+KPN +TY+A
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LSACSH GL+SEGW+HF SMY++H I  +MEHYACMVDLL R+G LT+A EFI +MP  
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           ADVLVWRTFLGACRVH +TELGK AA  ILE DP +PAA+I LSN+YA AG WE    +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           ++MKERNL+KE GCSWIE  +K+HKF+VG+T+HP   +IY ELD+L  +IK  GY+PDT+
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTD 760

Query: 776 FVLHEL----EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
            VLH+L    +E +K + L+QHSEKIAVAFGLISTSKS+P+RVFKNLRVCGDCH A+KYI
Sbjct: 761 LVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYI 820

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S V+GREIVLRD NRFHH KDGKCSCNDYW
Sbjct: 821 STVSGREIVLRDLNRFHHFKDGKCSCNDYW 850


>gi|356577722|ref|XP_003556972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Glycine max]
          Length = 820

 Score = 1057 bits (2734), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 519/807 (64%), Positives = 631/807 (78%), Gaps = 14/807 (1%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           ++KAI  LDL T       L   SLLLK+CIRS N  LGKL+H  L  S L  +SV+LNS
Sbjct: 24  LRKAISRLDLTTTS----PLIKSSLLLKACIRSGNLELGKLLHHKLIDSGLPLDSVLLNS 79

Query: 119 LISLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-- 175
           LI+LYSKCGD   A  IF++MG+ KRD+VSWS++IS + N   +  A+  F+ ML+    
Sbjct: 80  LITLYSKCGDWENALSIFRNMGHHKRDLVSWSAIISCFANNSMESRALLTFLHMLQCSRN 139

Query: 176 -FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              PNEYCF+A++R+CSN      G  I+ FLLK GYFDS VCVGCALIDMF KG +D++
Sbjct: 140 IIYPNEYCFTALLRSCSNPLFFTTGLAIFAFLLKTGYFDSHVCVGCALIDMFTKGGLDIQ 199

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           SA  VFDKM  KN V WTLMITR +QLG   DA+ LF  +++S + PD+FTL+ ++SAC 
Sbjct: 200 SARMVFDKMQHKNLVTWTLMITRYSQLGLLDDAVDLFCRLLVSEYTPDKFTLTSLLSACV 259

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           ELE F+ GKQLHSW IR+GLA DV VGC+LVDMYAK     +V++SRK+F+ ML HNVMS
Sbjct: 260 ELEFFSLGKQLHSWVIRSGLASDVFVGCTLVDMYAK---SAAVENSRKIFNTMLHHNVMS 316

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA+I+GYVQS  +++EA+KLF +M+ G V PN FTF+SVLKAC +L D  + +Q++   
Sbjct: 317 WTALISGYVQSR-QEQEAIKLFCNMLHGHVTPNCFTFSSVLKACASLPDFGIGKQLHGQT 375

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K G +  +CVGNSLI+MYARSG ME ARKAF  LFEKNL+SYNT  DA AK L+S+++F
Sbjct: 376 IKLGLSTINCVGNSLINMYARSGTMECARKAFNILFEKNLISYNTAADANAKALDSDESF 435

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
              HE+E TGVG S +T+A LLSGA+ IG I KGEQIHA I+KSGF +N CI NALISMY
Sbjct: 436 N--HEVEHTGVGASPFTYACLLSGAACIGTIVKGEQIHALIVKSGFGTNLCINNALISMY 493

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S+C N EAA QVF +M  RNVI+WTS+I+GFAKHGFA +ALE+FY+ML  G+KPN +TYI
Sbjct: 494 SKCGNKEAALQVFNDMGYRNVITWTSIISGFAKHGFATKALELFYEMLEIGVKPNEVTYI 553

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           AVLSACSH GLI E WKHF SM+  H I  RMEHYACMVDLLGRSG L EA+EFI SMP 
Sbjct: 554 AVLSACSHVGLIDEAWKHFNSMHYNHSISPRMEHYACMVDLLGRSGLLLEAIEFINSMPF 613

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
            AD LVWRTFLG+CRVH +T+LG+HAA+ ILE++P DPA +ILLSNLYAS G W+ VA +
Sbjct: 614 DADALVWRTFLGSCRVHRNTKLGEHAAKKILEREPHDPATYILLSNLYASEGRWDDVAAL 673

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           RK MK++ LIKE G SWIE DN+VHKFHVG+TSHP+  +IY ELD+LALKIK  GY+P+T
Sbjct: 674 RKSMKQKKLIKETGYSWIEVDNQVHKFHVGDTSHPQARKIYDELDELALKIKNLGYIPNT 733

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           +FVLH++E+EQK QYLFQHSEKIAVA+ LIST K KPIRVFKNLRVCGDCHTAIKYIS+V
Sbjct: 734 DFVLHDVEDEQKEQYLFQHSEKIAVAYALISTPKPKPIRVFKNLRVCGDCHTAIKYISIV 793

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
           TGREIV+RD+NRFHHIKDGKCSCNDYW
Sbjct: 794 TGREIVVRDANRFHHIKDGKCSCNDYW 820


>gi|357470275|ref|XP_003605422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506477|gb|AES87619.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 839

 Score = 1049 bits (2713), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 518/817 (63%), Positives = 637/817 (77%), Gaps = 15/817 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPD-LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           N  ++ KAI TL+L   +  H + L T SLLLK CIR++N HLGKL+H  LT S L  ++
Sbjct: 28  NPQQLHKAITTLNLTDTESTHNNKLITSSLLLKQCIRTKNTHLGKLLHHKLTTSNLPLDT 87

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           ++LNSLI+LYSK  D   A  IF+SM N KRD+VS+SS+IS + N    + A+ MF ++L
Sbjct: 88  LLLNSLITLYSKSNDPITAFSIFQSMENSKRDVVSYSSIISCFANNRNCLKAVEMFDQLL 147

Query: 173 -ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS- 230
            + G  PNEYCF+AVIRAC        G  ++GF+LK GYFDS VCVGC LIDMFVKG  
Sbjct: 148 LQDGVYPNEYCFTAVIRACLKGGFFKTGLCLFGFVLKTGYFDSHVCVGCELIDMFVKGCS 207

Query: 231 -VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSG 288
             DLESA KVFDKM EKN V WTLMITR  Q G   +AI LFL+M++S G++PDRFTL+G
Sbjct: 208 LADLESARKVFDKMREKNVVTWTLMITRLAQYGYNDEAIDLFLEMLVSSGYVPDRFTLTG 267

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++S C+E++  + GK+LHSW IR+GL LD+CVGCSLVDMYAKC   G V ++RKVFD M 
Sbjct: 268 LISVCAEIQFLSLGKELHSWVIRSGLVLDLCVGCSLVDMYAKC---GLVQEARKVFDGMR 324

Query: 349 DHNVMSWTAIITGYVQSGG-RDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNV 406
           +HNVMSWTA++ GYV+ GG  ++EA+++FS+M+ QG VAPN FTF+ VLKAC +L D + 
Sbjct: 325 EHNVMSWTALVNGYVRGGGGYEREAMRMFSNMLLQGGVAPNCFTFSGVLKACASLPDFDF 384

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            EQV+   +K G +  DCVGN L+S+YA+SGRME ARK F+ LFEKNLVS   + D   K
Sbjct: 385 GEQVHGQTIKLGLSAIDCVGNGLVSVYAKSGRMESARKCFDVLFEKNLVSETVVDDTNVK 444

Query: 467 --NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
             NLNSE+  +L  E+E  G G S++T+ASLLSGA+ IG IGKGEQIHA ++K GF ++ 
Sbjct: 445 DFNLNSEQ--DLDREVEYVGSGVSSFTYASLLSGAACIGTIGKGEQIHAMVVKIGFRTDL 502

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + NALISMYS+C N EAA QVF +MED NVI+WTS+I GFAKHGFA++ALE+FY ML  
Sbjct: 503 SVNNALISMYSKCGNKEAALQVFNDMEDCNVITWTSIINGFAKHGFASKALELFYNMLET 562

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
           G+KPN +TYIAVLSACSH GLI E WKHF SM D HGIV RMEHYACMVDLLGRSG L+E
Sbjct: 563 GVKPNDVTYIAVLSACSHVGLIDEAWKHFTSMRDNHGIVPRMEHYACMVDLLGRSGLLSE 622

Query: 645 ALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYAS 704
           A+EFI SMP  AD LVWRTFLG+CRVH +T+LG+HAA+MILE++P DPA +ILLSNLYA+
Sbjct: 623 AIEFINSMPFDADALVWRTFLGSCRVHRNTKLGEHAAKMILEREPHDPATYILLSNLYAT 682

Query: 705 AGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALK 764
            G WE VA IRK MK++ + KEAG SWIE +N+VHKFHVG+T HPK  +IY +LD+LALK
Sbjct: 683 EGRWEDVAAIRKNMKQKQITKEAGSSWIEVENQVHKFHVGDTLHPKAQQIYEKLDELALK 742

Query: 765 IKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDC 824
           IK  GY+P+T+FVLH++E+EQK QYLFQHSEK+AVAF LIST   KPIRVFKNLRVCGDC
Sbjct: 743 IKNVGYVPNTDFVLHDVEDEQKEQYLFQHSEKLAVAFALISTPNPKPIRVFKNLRVCGDC 802

Query: 825 HTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           HTAIKYISMV+GREIV+RD+NRFHH+KDG CSCNDYW
Sbjct: 803 HTAIKYISMVSGREIVVRDANRFHHMKDGTCSCNDYW 839


>gi|296090723|emb|CBI41122.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score = 1036 bits (2680), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 493/634 (77%), Positives = 547/634 (86%)

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           KGSV    AYKVFDKM E+N V WTLMITR  QLGC RDAI LFLDM LSG++PDRFT S
Sbjct: 1   KGSVIWAPAYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYS 60

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V+SAC+EL L   GKQLHS  IR GLALDVCVGCSLVDMYAKC  DGSVDDSRKVF++M
Sbjct: 61  SVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQM 120

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            +HNVMSWTAIIT Y QSG  DKEA++LF  MI G + PNHF+F+SVLKACGNL D    
Sbjct: 121 PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTG 180

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           EQVY++AVK G A  +CVGNSLISMYARSGRMEDARKAF+ LFEKNLVSYN +VD YAKN
Sbjct: 181 EQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKN 240

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
           L SE+AF L +EI DTG+G SA+TFASLLSGA+SIGA+GKGEQIH R++K G++SN CI 
Sbjct: 241 LKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCIC 300

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           NALISMYSRC N+EAAFQVF EMEDRNVISWTSMITGFAKHGFA RALE+F+KML  G K
Sbjct: 301 NALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTK 360

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           PN ITY+AVLSACSH G+ISEG KHF SMY EHGIV RMEHYACMVDLLGRSG L EA+E
Sbjct: 361 PNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAME 420

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
           FI SMPL AD LVWRT LGACRVHG+TELG+HAAEMILEQ+P DPAA+ILLSNL+ASAG 
Sbjct: 421 FINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQ 480

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W+ V  IRK MKERNLIKEAGCSWIE +N+VH+FHVGETSHP+  +IY ELDQLA KIKE
Sbjct: 481 WKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKE 540

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY+PDT+FVLH++EEEQK Q+LFQHSEKIAVAFGLISTS+SKPIR+FKNLRVCGDCHTA
Sbjct: 541 MGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTA 600

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IKYISM TGREIV+RDSNRFHHIK+G CSCNDYW
Sbjct: 601 IKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 634



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 255/443 (57%), Gaps = 11/443 (2%)

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A K+F  M  +R++V+W+ MI+ +   G   DAI +F++M   G+ P+ + +S+V+ AC+
Sbjct: 9   AYKVFDKM-PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 67

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD--LESAYKVFDKMTEKNTV 249
               +A+G  ++  +++ G    DVCVGC+L+DM+ K + D  ++ + KVF++M E N +
Sbjct: 68  ELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 126

Query: 250 GWTLMITRCTQLG-CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
            WT +IT   Q G C ++AI LF  MI     P+ F+ S V+ AC  L    +G+Q++S+
Sbjct: 127 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 186

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           A++ G+A   CVG SL+ MYA+    G ++D+RK FD + + N++S+ AI+ GY ++  +
Sbjct: 187 AVKLGIASVNCVGNSLISMYAR---SGRMEDARKAFDILFEKNLVSYNAIVDGYAKN-LK 242

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            +EA  LF+++    +  + FTFAS+L    ++      EQ++   +K G   + C+ N+
Sbjct: 243 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 302

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LISMY+R G +E A + F  + ++N++S+ +M+  +AK+  + +A E+ H++ +TG   +
Sbjct: 303 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 362

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVF 547
             T+ ++LS  S +G I +G++    + K  G       Y  ++ +  R   +  A +  
Sbjct: 363 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 422

Query: 548 KEME-DRNVISWTSMITGFAKHG 569
             M    + + W +++     HG
Sbjct: 423 NSMPLMADALVWRTLLGACRVHG 445



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 189/337 (56%), Gaps = 11/337 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC-- 126
           M   G  PD  TYS +L +C       LGK +HS + R  L  +  +  SL+ +Y+KC  
Sbjct: 47  MELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA 106

Query: 127 -GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK-QVDAIHMFVEMLELGFCPNEYCFS 184
            G ++++ K+F+ M  + +++SW+++I++Y   G+   +AI +F +M+     PN + FS
Sbjct: 107 DGSVDDSRKVFEQM-PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFS 165

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +V++AC N  +   G  +Y + +K G   S  CVG +LI M+ + S  +E A K FD + 
Sbjct: 166 SVLKACGNLSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMYAR-SGRMEDARKAFDILF 223

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           EKN V +  ++    +     +A  LF ++  +G     FT + ++S  + +     G+Q
Sbjct: 224 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 283

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   ++ G   + C+  +L+ MY++C   G+++ + +VF+ M D NV+SWT++ITG+ +
Sbjct: 284 IHGRLLKGGYKSNQCICNALISMYSRC---GNIEAAFQVFNEMEDRNVISWTSMITGFAK 340

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            G   + A+++F  M++    PN  T+ +VL AC ++
Sbjct: 341 HGFATR-ALEMFHKMLETGTKPNEITYVAVLSACSHV 376



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 1/121 (0%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T++ LL           G+ +H  L +   + N  I N+LIS+YS+CG++  A ++F  M
Sbjct: 264 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 323

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            + R+++SW+SMI+ +   G    A+ MF +MLE G  PNE  + AV+ ACS+   ++ G
Sbjct: 324 ED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 382

Query: 200 H 200
            
Sbjct: 383 Q 383


>gi|359497772|ref|XP_003635637.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like, partial [Vitis vinifera]
          Length = 629

 Score = 1031 bits (2666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 489/626 (78%), Positives = 543/626 (86%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           AYKVFDKM E+N V WTLMITR  QLGC RDAI LFLDM LSG++PDRFT S V+SAC+E
Sbjct: 4   AYKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTE 63

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L L   GKQLHS  IR GLALDVCVGCSLVDMYAKC  DGSVDDSRKVF++M +HNVMSW
Sbjct: 64  LGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVMSW 123

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           TAIIT Y QSG  DKEA++LF  MI G + PNHF+F+SVLKACGNL D    EQVY++AV
Sbjct: 124 TAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSYAV 183

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K G A  +CVGNSLISMYARSGRMEDARKAF+ LFEKNLVSYN +VD YAKNL SE+AF 
Sbjct: 184 KLGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFL 243

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L +EI DTG+G SA+TFASLLSGA+SIGA+GKGEQIH R++K G++SN CI NALISMYS
Sbjct: 244 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 303

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           RC N+EAAFQVF EMEDRNVISWTSMITGFAKHGFA RALE+F+KML  G KPN ITY+A
Sbjct: 304 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVA 363

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VLSACSH G+ISEG KHF SMY EHGIV RMEHYACMVDLLGRSG L EA+EFI SMPL 
Sbjct: 364 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 423

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           AD LVWRT LGACRVHG+TELG+HAAEMILEQ+P DPAA+ILLSNL+ASAG W+ V  IR
Sbjct: 424 ADALVWRTLLGACRVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 483

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K MKERNLIKEAGCSWIE +N+VH+FHVGETSHP+  +IY ELDQLA KIKE GY+PDT+
Sbjct: 484 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 543

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
           FVLH++EEEQK Q+LFQHSEKIAVAFGLISTS+SKPIR+FKNLRVCGDCHTAIKYISM T
Sbjct: 544 FVLHDIEEEQKEQFLFQHSEKIAVAFGLISTSQSKPIRIFKNLRVCGDCHTAIKYISMAT 603

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
           GREIV+RDSNRFHHIK+G CSCNDYW
Sbjct: 604 GREIVVRDSNRFHHIKNGVCSCNDYW 629



 Score =  249 bits (636), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 255/443 (57%), Gaps = 11/443 (2%)

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A K+F  M  +R++V+W+ MI+ +   G   DAI +F++M   G+ P+ + +S+V+ AC+
Sbjct: 4   AYKVFDKM-PERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACT 62

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD--LESAYKVFDKMTEKNTV 249
               +A+G  ++  +++ G    DVCVGC+L+DM+ K + D  ++ + KVF++M E N +
Sbjct: 63  ELGLLALGKQLHSRVIRLG-LALDVCVGCSLVDMYAKCAADGSVDDSRKVFEQMPEHNVM 121

Query: 250 GWTLMITRCTQLG-CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
            WT +IT   Q G C ++AI LF  MI     P+ F+ S V+ AC  L    +G+Q++S+
Sbjct: 122 SWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFSSVLKACGNLSDPYTGEQVYSY 181

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           A++ G+A   CVG SL+ MYA+    G ++D+RK FD + + N++S+ AI+ GY ++  +
Sbjct: 182 AVKLGIASVNCVGNSLISMYAR---SGRMEDARKAFDILFEKNLVSYNAIVDGYAKN-LK 237

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            +EA  LF+++    +  + FTFAS+L    ++      EQ++   +K G   + C+ N+
Sbjct: 238 SEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNA 297

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LISMY+R G +E A + F  + ++N++S+ +M+  +AK+  + +A E+ H++ +TG   +
Sbjct: 298 LISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPN 357

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVF 547
             T+ ++LS  S +G I +G++    + K  G       Y  ++ +  R   +  A +  
Sbjct: 358 EITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFI 417

Query: 548 KEME-DRNVISWTSMITGFAKHG 569
             M    + + W +++     HG
Sbjct: 418 NSMPLMADALVWRTLLGACRVHG 440



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/337 (30%), Positives = 189/337 (56%), Gaps = 11/337 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC-- 126
           M   G  PD  TYS +L +C       LGK +HS + R  L  +  +  SL+ +Y+KC  
Sbjct: 42  MELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAA 101

Query: 127 -GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK-QVDAIHMFVEMLELGFCPNEYCFS 184
            G ++++ K+F+ M  + +++SW+++I++Y   G+   +AI +F +M+     PN + FS
Sbjct: 102 DGSVDDSRKVFEQM-PEHNVMSWTAIITAYAQSGECDKEAIELFCKMISGHIRPNHFSFS 160

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +V++AC N  +   G  +Y + +K G   S  CVG +LI M+ + S  +E A K FD + 
Sbjct: 161 SVLKACGNLSDPYTGEQVYSYAVKLG-IASVNCVGNSLISMYAR-SGRMEDARKAFDILF 218

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           EKN V +  ++    +     +A  LF ++  +G     FT + ++S  + +     G+Q
Sbjct: 219 EKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQ 278

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   ++ G   + C+  +L+ MY++C   G+++ + +VF+ M D NV+SWT++ITG+ +
Sbjct: 279 IHGRLLKGGYKSNQCICNALISMYSRC---GNIEAAFQVFNEMEDRNVISWTSMITGFAK 335

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            G   + A+++F  M++    PN  T+ +VL AC ++
Sbjct: 336 HGFATR-ALEMFHKMLETGTKPNEITYVAVLSACSHV 371



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 66/229 (28%), Positives = 132/229 (57%), Gaps = 3/229 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  ++S +LK+C    + + G+ V+S   +  +   + + NSLIS+Y++ G + +A K 
Sbjct: 154 PNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLISMYARSGRMEDARKA 213

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  +  K ++VS+++++  Y    K  +A  +F E+ + G   + + F++++   ++   
Sbjct: 214 FDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGA 272

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+G LLK GY  S+ C+  ALI M+ +   ++E+A++VF++M ++N + WT MI
Sbjct: 273 MGKGEQIHGRLLKGGY-KSNQCICNALISMYSRCG-NIEAAFQVFNEMEDRNVISWTSMI 330

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           T   + G    A+ +F  M+ +G  P+  T   V+SACS + + + G++
Sbjct: 331 TGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 379


>gi|6723387|emb|CAB66396.1| putative protein [Arabidopsis thaliana]
          Length = 1113

 Score = 1010 bits (2611), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 495/825 (60%), Positives = 628/825 (76%), Gaps = 31/825 (3%)

Query: 1   MMTLSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRV 59
           M++ S P+PAK+P  S  +PS  +R N                  +++RLI  HLN G +
Sbjct: 3   MISFSFPSPAKLPIKS--QPSVSNRIN------------------VADRLILRHLNAGDL 42

Query: 60  QKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           + A+  LDLM + G  P D  T+S LLKSCIR+R+F LGKLVH+ L    +EP+SV+ NS
Sbjct: 43  RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102

Query: 119 LISLYSKCGDLNEANKIFKSMG--NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           LISLYSK GD  +A  +F++M    KRD+VSWS+M++ Y N G+++DAI +FVE LELG 
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN+YC++AVIRACSN++ V +G +  GFL+K G+F+SDVCVGC+LIDMFVKG    E+A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           YKVFDKM+E N V WTLMITRC Q+G PR+AIR FLDM+LSGF  D+FTLS V SAC+EL
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E  + GKQLHSWAIR+GL  D  V CSLVDMYAKC+ DGSVDD RKVFDRM DH+VMSWT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           A+ITGY+++     EA+ LFS+MI QG V PNHFTF+S  KACGNL D  V +QV   A 
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           KRG A +  V NS+ISM+ +S RMEDA++AFESL EKNLVSYNT +D   +NLN E+AF+
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           LL EI +  +G SA+TFASLLSG +++G+I KGEQIH++++K G   N  + NALISMYS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C +++ A +VF  ME+RNVISWTSMITGFAKHGFA R LE F +M+ +G+KPN +TY+A
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LSACSH GL+SEGW+HF SMY++H I  +MEHYACMVDLL R+G LT+A EFI +MP  
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           ADVLVWRTFLGACRVH +TELGK AA  ILE DP +PAA+I LSN+YA AG WE    +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           ++MKERNL+KE GCSWIE  +K+HKF+VG+T+HP   +IY ELD+L  +IK  GY+PDT+
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTD 760

Query: 776 FVLHEL----EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            VLH+L    +E +K + L+QHSEKIAVAFGLISTSKS+P+++ +
Sbjct: 761 LVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPLKMIQ 805


>gi|297819542|ref|XP_002877654.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323492|gb|EFH53913.1| hypothetical protein ARALYDRAFT_323502 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1112

 Score =  997 bits (2578), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 496/821 (60%), Positives = 623/821 (75%), Gaps = 31/821 (3%)

Query: 1   MMTLSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRV 59
           M++ S P+PAK+P                   SPP I+       +++RLI  HLN G +
Sbjct: 3   MISFSFPSPAKLP-----------------IKSPPSISNRIN---VADRLILRHLNAGDL 42

Query: 60  QKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           + A+  LDLM + G  P D  T+S LLKSCIR+R+F LGKLVH+ L   ++EP+SV+ NS
Sbjct: 43  RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARHFRLGKLVHARLIEFEIEPDSVLYNS 102

Query: 119 LISLYSKCGDLNEANKIFKSMG--NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           LISLYSK GDL +A  +F++MG   KRD+VSWS+M++ + N G++ DAI +FVE LE+G 
Sbjct: 103 LISLYSKSGDLTKAKDVFETMGRFGKRDVVSWSAMMACFGNNGREFDAIKLFVEFLEMGL 162

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN+YC++AVIRACSN++ V +G +I GFL+K G+F+SDVCVGC+LIDMFVKG    E+A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVILGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           YKVFDKM+E N V WTLMITRC Q+G PR+AIR FLDM+LSGF  D+FTLS V SAC+EL
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E  + G+QLHSWAIR+GLA DV   CSLVDMYAKC+ DGSVDD RKVFDRM DH+VMSWT
Sbjct: 283 ENLSLGRQLHSWAIRSGLADDV--ECSLVDMYAKCSADGSVDDCRKVFDRMQDHSVMSWT 340

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           A+ITGY+Q+     EA+ LFS+MI QG V PNHFTF+S  KACGN+ D  V +QV  HA 
Sbjct: 341 ALITGYMQNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNVSDPRVGKQVLGHAF 400

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           KRG A +  V NS+ISM+ +  RMEDAR AFESL EKNLVSYNT +D   +NL+ E AFE
Sbjct: 401 KRGLASNSSVSNSVISMFVKCDRMEDARTAFESLSEKNLVSYNTFLDGTCRNLDFEHAFE 460

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           LL EI +  +G SA+TFASLLSG +++G++ KGEQIH++++K G   N  + NALISMYS
Sbjct: 461 LLSEIAERELGVSAFTFASLLSGVANVGSLRKGEQIHSQVLKLGLSCNQPVCNALISMYS 520

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C +++ A +VF  M++RNVISWTSMITGFAKHGFA R LE F +M  +G+KPN +TY+A
Sbjct: 521 KCGSIDTASRVFSLMDNRNVISWTSMITGFAKHGFAERVLETFNQMTKEGVKPNEVTYVA 580

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LSACSH GL+SEGW+HF SMY++H I  +MEHYACMVDLL R+G LT+A EFI +MP  
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           ADVLVWRTFLGACRVH +TELGK AA  ILE DP +PAA+I LSN+YASAG WE    +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILEFDPNEPAAYIQLSNIYASAGKWEESTEMR 700

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           ++MKERNL+KE GCSWIE  +KVHKF+VG+TSHP   +IY ELD L  +IK  GY+PDT+
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKVHKFYVGDTSHPNAHQIYDELDWLITEIKRCGYVPDTD 760

Query: 776 FVLHEL----EEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
            VLH+L    +E +K   L+QHSEKIAVAFGLIST+KS+P+
Sbjct: 761 LVLHKLEEEDDEAKKEMLLYQHSEKIAVAFGLISTAKSRPM 801


>gi|296083568|emb|CBI23560.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  828 bits (2138), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/535 (74%), Positives = 441/535 (82%), Gaps = 38/535 (7%)

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MYAKC  DGSVDDSRKVF++M +HNVMSWTAIIT YVQSG  DKEA++LF  MI   V  
Sbjct: 1   MYAKCAADGSVDDSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMISASV-- 58

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
                                               +CVGNSLISMYARSGRMEDARKAF
Sbjct: 59  ------------------------------------NCVGNSLISMYARSGRMEDARKAF 82

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + LFEKNLVSYN +VD YAKNL SE+AF L +EI DTG+G SA+TFASLLSGA+SIGA+G
Sbjct: 83  DILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMG 142

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           KGEQIH R++K G++SN CI NALISMYSRC N+EAAFQVF EMEDRNVISWTSMITGFA
Sbjct: 143 KGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFA 202

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           KHGFA RALE+F+KML  G KPN ITY+AVLSACSH G+ISEG KHF SMY EHGIV RM
Sbjct: 203 KHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQKHFNSMYKEHGIVPRM 262

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHYACMVDLLGRSG L EA+EFI SMPL AD LVWRT LGACRVHG+TELG+HAAEMILE
Sbjct: 263 EHYACMVDLLGRSGLLVEAMEFINSMPLMADALVWRTLLGACRVHGNTELGRHAAEMILE 322

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
           Q+P DPAA+ILLSNL+ASAG W+ V  IRK MKERNLIKEAGCSWIE +N+VH+FHVGET
Sbjct: 323 QEPDDPAAYILLSNLHASAGQWKDVVKIRKSMKERNLIKEAGCSWIEVENRVHRFHVGET 382

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           SHP+  +IY ELDQLA KIKE GY+PDT+FVLH++EEEQK Q+LFQHSEKIAVAFGLIST
Sbjct: 383 SHPQAWQIYQELDQLASKIKEMGYIPDTDFVLHDIEEEQKEQFLFQHSEKIAVAFGLIST 442

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S+SKPIR+FKNLRVCGDCHTAIKYISM TGREIV+RDSNRFHHIK+G CSCNDYW
Sbjct: 443 SQSKPIRIFKNLRVCGDCHTAIKYISMATGREIVVRDSNRFHHIKNGVCSCNDYW 497



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 88/283 (31%), Positives = 152/283 (53%), Gaps = 45/283 (15%)

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG-CPRDAIRLFLDMILSGFLPDRFTLS 287
           GSVD   + KVF++M E N + WT +IT   Q G C ++AI LF  MI           S
Sbjct: 9   GSVD--DSRKVFEQMPEHNVMSWTAIITAYVQSGECDKEAIELFCKMI-----------S 55

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
             V+                           CVG SL+ MYA+    G ++D+RK FD +
Sbjct: 56  ASVN---------------------------CVGNSLISMYAR---SGRMEDARKAFDIL 85

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            + N++S+ AI+ GY ++  + +EA  LF+++    +  + FTFAS+L    ++      
Sbjct: 86  FEKNLVSYNAIVDGYAKNL-KSEEAFLLFNEIADTGIGISAFTFASLLSGAASIGAMGKG 144

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           EQ++   +K G   + C+ N+LISMY+R G +E A + F  + ++N++S+ +M+  +AK+
Sbjct: 145 EQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEMEDRNVISWTSMITGFAKH 204

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
             + +A E+ H++ +TG   +  T+ ++LS  S +G I +G++
Sbjct: 205 GFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEGQK 247



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 146/284 (51%), Gaps = 49/284 (17%)

Query: 122 LYSKC---GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK-QVDAIHMFVEMLELGFC 177
           +Y+KC   G ++++ K+F+ M  + +++SW+++I++YV  G+   +AI +F +M      
Sbjct: 1   MYAKCAADGSVDDSRKVFEQM-PEHNVMSWTAIITAYVQSGECDKEAIELFCKM------ 53

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
                    I A  N                        CVG +LI M+ + S  +E A 
Sbjct: 54  ---------ISASVN------------------------CVGNSLISMYAR-SGRMEDAR 79

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           K FD + EKN V +  ++    +     +A  LF ++  +G     FT + ++S  + + 
Sbjct: 80  KAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAFTFASLLSGAASIG 139

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G+Q+H   ++ G   + C+  +L+ MY++C   G+++ + +VF+ M D NV+SWT+
Sbjct: 140 AMGKGEQIHGRLLKGGYKSNQCICNALISMYSRC---GNIEAAFQVFNEMEDRNVISWTS 196

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           +ITG+ + G   + A+++F  M++    PN  T+ +VL AC ++
Sbjct: 197 MITGFAKHGFATR-ALEMFHKMLETGTKPNEITYVAVLSACSHV 239



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 58/188 (30%), Positives = 111/188 (59%), Gaps = 3/188 (1%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLIS+Y++ G + +A K F  +  K ++VS+++++  Y    K  +A  +F E+ + G 
Sbjct: 63  NSLISMYARSGRMEDARKAFDILFEK-NLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGI 121

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             + + F++++   ++   +  G  I+G LLK GY  S+ C+  ALI M+ +   ++E+A
Sbjct: 122 GISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQCICNALISMYSRCG-NIEAA 179

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           ++VF++M ++N + WT MIT   + G    A+ +F  M+ +G  P+  T   V+SACS +
Sbjct: 180 FQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHV 239

Query: 297 ELFTSGKQ 304
            + + G++
Sbjct: 240 GMISEGQK 247



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 69/121 (57%), Gaps = 1/121 (0%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T++ LL           G+ +H  L +   + N  I N+LIS+YS+CG++  A ++F  M
Sbjct: 127 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 186

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            + R+++SW+SMI+ +   G    A+ MF +MLE G  PNE  + AV+ ACS+   ++ G
Sbjct: 187 ED-RNVISWTSMITGFAKHGFATRALEMFHKMLETGTKPNEITYVAVLSACSHVGMISEG 245

Query: 200 H 200
            
Sbjct: 246 Q 246


>gi|357134267|ref|XP_003568739.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 818

 Score =  825 bits (2130), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/780 (51%), Positives = 551/780 (70%), Gaps = 9/780 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSK-LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           LL S  R+ +  LG+ +H  L RS+ L+ ++V+ NSL+++YSKCG +  A ++F  M   
Sbjct: 46  LLTSAARAGDLRLGRALHRRLLRSEILDTDAVVANSLLTMYSKCGAVEAARRVFDQMCGV 105

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI-GHI 201
           RD+VSW++M S     G + +++ +  EMLELG  PN +   A  RAC   E   + G +
Sbjct: 106 RDLVSWTAMASCLARNGAERESLRLLGEMLELGLRPNAFTLCAAARACFPQELFRLAGGV 165

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           + GF+LK G++ +DV VGCALIDMF +   DL +A +VFD + E+ +V WTL+ITR  Q 
Sbjct: 166 VLGFVLKTGFWGTDVSVGCALIDMFARNG-DLVAAQRVFDGLIERTSVVWTLLITRYVQA 224

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           GC    + LFL M+  GF PD +++S ++SAC+EL     G+QLHS A+R GL  D CV 
Sbjct: 225 GCASKVVELFLHMLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVS 284

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
           C LVDMYAK  ++ S++ +RKVF  M  HNVMSWTA+I+GYVQSG ++   + LF +M+ 
Sbjct: 285 CGLVDMYAKLKMERSMEHARKVFKTMPRHNVMSWTALISGYVQSGVQENNVMALFREMLN 344

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + PNH T++++LKAC NL D +   Q++ H +K   A  + VGN+L+SMYA SG ME+
Sbjct: 345 ESIRPNHITYSNLLKACANLSDQDSGRQIHAHVLKTSIAHVNVVGNALVSMYAESGCMEE 404

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           ARKAF+ L+E N++S +  V+    N +         +IE    G S +TFASLLS A+S
Sbjct: 405 ARKAFDQLYETNILSMSPDVETERNNASCSS------KIEGMDDGVSTFTFASLLSAAAS 458

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +G + KG+++HA  +K+GF S+  I N+L+SMY+RC  +E A + F EM+D NVISWTS+
Sbjct: 459 VGLLTKGQKLHALSMKAGFRSDQGISNSLVSMYARCGYLEDACRAFDEMKDHNVISWTSI 518

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I+G AKHG+A +AL +F+ M+  G+KPN +TYIAVLSACSH GL+ EG +HFRSM  +HG
Sbjct: 519 ISGLAKHGYAKQALSMFHDMILAGVKPNDVTYIAVLSACSHVGLVKEGKEHFRSMQKDHG 578

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           ++ RMEHYAC+VDLL RSG + EA +FI  MP  AD LVW+T L ACR +G+TE+G+ AA
Sbjct: 579 LLPRMEHYACIVDLLARSGLVEEARQFINEMPCKADALVWKTLLSACRTYGNTEIGEIAA 638

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
             ++  +P+DPA ++LLSNLYA AG W+ VA IR  M+++NL KE G SW++  N +H+F
Sbjct: 639 NHVINLEPRDPAPYVLLSNLYADAGLWDEVARIRSLMRDKNLSKETGLSWMDVGNTIHEF 698

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
             G+TSHP  ++IYA+L  L  +IK+ GY+PDT+ VLH++ EE K QYL QHSEKIAVAF
Sbjct: 699 RAGDTSHPLAIDIYAKLVTLIREIKDIGYVPDTSIVLHDMSEELKEQYLLQHSEKIAVAF 758

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GLI+TS +KP+R+FKNLRVC DCH+AIKYIS  TGREI+LRDSNRFH +KDG CSC +YW
Sbjct: 759 GLITTSATKPMRIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGICSCGEYW 818



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 163/607 (26%), Positives = 278/607 (45%), Gaps = 81/607 (13%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG- 127
           M   G  PD  + S ++ +C    +  LG+ +HS+  R  L  +S +   L+ +Y+K   
Sbjct: 237 MLDDGFEPDGYSMSSMISACTELGSVRLGQQLHSVALRLGLVSDSCVSCGLVDMYAKLKM 296

Query: 128 --DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI-HMFVEMLELGFCPNEYCFS 184
              +  A K+FK+M  + +++SW+++IS YV  G Q + +  +F EML     PN   +S
Sbjct: 297 ERSMEHARKVFKTM-PRHNVMSWTALISGYVQSGVQENNVMALFREMLNESIRPNHITYS 355

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            +++AC+N  +   G  I+  +LK      +V VG AL+ M+ +    +E A K FD++ 
Sbjct: 356 NLLKACANLSDQDSGRQIHAHVLKTSIAHVNV-VGNALVSMYAESGC-MEEARKAFDQLY 413

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           E N +  +  +            I    D + +      FT + ++SA + + L T G++
Sbjct: 414 ETNILSMSPDVETERNNASCSSKIEGMDDGVST------FTFASLLSAAASVGLLTKGQK 467

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH+ +++ G   D  +  SLV MYA+C   G ++D+ + FD M DHNV+SWT+II+G  +
Sbjct: 468 LHALSMKAGFRSDQGISNSLVSMYARC---GYLEDACRAFDEMKDHNVISWTSIISGLAK 524

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
             G  K+A+ +F DMI   V PN  T+ +VL AC            +   VK G+     
Sbjct: 525 H-GYAKQALSMFHDMILAGVKPNDVTYIAVLSACS-----------HVGLVKEGK----- 567

Query: 425 VGNSLISMYARSG---RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
                 SM    G   RME                Y  +VD  A++   E+A + ++E+ 
Sbjct: 568 --EHFRSMQKDHGLLPRMEH---------------YACIVDLLARSGLVEEARQFINEMP 610

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
                  A  + +LLS   + G    GE I A  + +    +   Y  L ++Y+     +
Sbjct: 611 ---CKADALVWKTLLSACRTYGNTEIGE-IAANHVINLEPRDPAPYVLLSNLYADAGLWD 666

Query: 542 AAFQVFKEMEDRNV-----ISWTSMITGFAKHGFAA------RALEIFYKMLADGIKPNG 590
              ++   M D+N+     +SW  M  G   H F A       A++I+ K++    +   
Sbjct: 667 EVARIRSLMRDKNLSKETGLSW--MDVGNTIHEFRAGDTSHPLAIDIYAKLVTLIREIKD 724

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           I Y+   S   H   +SE  K       E  ++Q  E  A    L+  + S T+ +   +
Sbjct: 725 IGYVPDTSIVLHD--MSEELK-------EQYLLQHSEKIAVAFGLI--TTSATKPMRIFK 773

Query: 651 SMPLSAD 657
           ++ + AD
Sbjct: 774 NLRVCAD 780


>gi|413944893|gb|AFW77542.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 829

 Score =  821 bits (2121), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 400/781 (51%), Positives = 547/781 (70%), Gaps = 25/781 (3%)

Query: 93  NFHLGKLV--HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWS 149
           + HLG+ +  H L T S LE ++V+ NSL++LYSKC  +  A  +F  M    RD+VSW+
Sbjct: 62  DIHLGRALQGHLLRTGSLLETDAVVANSLLTLYSKCSAVAAARSVFDGMPVGLRDLVSWT 121

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEY--------CFSAVIRACSNTENVAIGHI 201
           +M S     G + +A+ +F E LE G  PN +        CF++ +   +       G  
Sbjct: 122 AMASCLSRNGAEAEALRLFGETLEEGLLPNAFTLCAATQACFASELFHLA-------GGA 174

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           + G + K G++ +DV VGCALIDMF K   DL +  +VFD + E+  V WTL+ITR  Q 
Sbjct: 175 VLGLVFKLGFWGTDVSVGCALIDMFAKNG-DLVAMRRVFDGLFERTVVVWTLLITRYAQS 233

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   +A+ LFLDM+ +GF PD++TLS ++SAC+EL  F  G+QLHS A+R GL  D CV 
Sbjct: 234 GYSDEAVELFLDMLENGFQPDQYTLSSMLSACTELGSFRLGQQLHSLALRLGLESDSCVS 293

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
           C LVDMYAK     S+ ++R+VF+RM  HNVM+WTA+++GYVQ G +D + + LF  M+ 
Sbjct: 294 CGLVDMYAKSHNGQSLHNAREVFNRMPKHNVMAWTALLSGYVQRGSQDNQVMILFCKMLN 353

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + PNH T++S+LKAC NL D +   Q++TH VK   A  + VGN+L+SMYA SG +E+
Sbjct: 354 EGIRPNHITYSSMLKACANLGDQDSGRQIHTHCVKSNLADLNVVGNALVSMYAESGSIEE 413

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           AR AF+ L+EKN+VS++  +D   ++   +      ++IE   +G S +TF SL+S A+S
Sbjct: 414 ARHAFDQLYEKNMVSFSGNLDGDGRSNTYQD-----YQIERMELGISTFTFGSLISAAAS 468

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +G + KG+++HA  +K+GF S+  I N+L+SMYSRC  +  A QVF EM D NVISWTSM
Sbjct: 469 VGMLTKGQRLHALSLKAGFGSDRAIGNSLVSMYSRCGYLVDACQVFDEMNDHNVISWTSM 528

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I+G AKHG+AARALE+F+ M+A G+KPN +TYIAVLSACSHAGL+ EG +HFR M   HG
Sbjct: 529 ISGLAKHGYAARALELFHDMIAAGVKPNDVTYIAVLSACSHAGLVKEGKEHFRMMQKHHG 588

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           ++ RMEHYACMVDLLGRSG + +AL+FI  MP   D LVW+T LGAC+ H + ++G+ AA
Sbjct: 589 LIPRMEHYACMVDLLGRSGLVEDALDFINEMPCQVDALVWKTLLGACKTHNNMDIGEIAA 648

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
             +++ +PQDPA ++LLSNLYA AG W+ VA IR  M+++NL+KE G SW+  DN +H+F
Sbjct: 649 NHVIQLEPQDPAPYVLLSNLYAEAGLWDQVARIRSLMRDKNLMKEKGLSWMHVDNTIHEF 708

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
             G+TSHP+  EIY +L+ L  +IK  GY+PDT+ VLH++ +E K   L QHSEKIAVAF
Sbjct: 709 RAGDTSHPQAEEIYTKLETLIREIKVMGYVPDTSVVLHDMSDELKELCLLQHSEKIAVAF 768

Query: 802 GLIS-TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           GLIS TS +KPIR+FKNLRVC DCH+A+KY+S  TGREI+LRDSNRFH +KDG+CSC +Y
Sbjct: 769 GLISCTSATKPIRIFKNLRVCVDCHSALKYVSKATGREIILRDSNRFHRMKDGECSCGEY 828

Query: 861 W 861
           W
Sbjct: 829 W 829


>gi|115462637|ref|NP_001054918.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|48475165|gb|AAT44234.1| unknown protein, contains PPR repeat [Oryza sativa Japonica Group]
 gi|113578469|dbj|BAF16832.1| Os05g0212100 [Oryza sativa Japonica Group]
 gi|215695208|dbj|BAG90399.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222630605|gb|EEE62737.1| hypothetical protein OsJ_17540 [Oryza sativa Japonica Group]
          Length = 822

 Score =  813 bits (2101), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 392/771 (50%), Positives = 535/771 (69%), Gaps = 13/771 (1%)

Query: 93  NFHLGKLVHSLLTRSKL-EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
           +  LG+ +H  L R  L + ++V+ NSL++LYS+CG +  A  +F  M   RDIVSW++M
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-KCG 210
            S     G + +++ +  EMLE G  PN Y   AV  AC   E   +   +   L+ K G
Sbjct: 123 ASCLARNGAERESLLLIGEMLESGLLPNAYTLCAVAHACFPHELYCLVGGVVLGLVHKMG 182

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
            + +D+ VG ALIDM  +   DL SA KVFD + EK  V WTL+I+R  Q  C  +A+ +
Sbjct: 183 LWGTDIAVGSALIDMLARNG-DLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEI 241

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           FLD +  GF PDR+T+S ++SAC+EL     G QLHS A+R G A D CV C LVDMYAK
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK 301

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
             ++ ++D + KVF+RM  ++V+SWTA+I+GYVQSG ++ + + LF +M+   + PNH T
Sbjct: 302 SNIEQAMDYANKVFERMRKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHIT 361

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           ++S+LKAC N+ D +   QV+ H +K  +A    VGN+L+SMYA SG ME+AR+ F  L+
Sbjct: 362 YSSILKACANISDHDSGRQVHAHVIKSNQAAAHTVGNALVSMYAESGCMEEARRVFNQLY 421

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E++++S           +   +   L H I    +G S+ TFASL+S A+S+G + KG+Q
Sbjct: 422 ERSMISC----------ITEGRDAPLDHRIGRMDMGISSSTFASLISAAASVGMLTKGQQ 471

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA  +K+GF S+  + N+L+SMYSRC  +E A + F E++DRNVISWTSMI+G AKHG+
Sbjct: 472 LHAMTLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
           A RAL +F+ M+  G+KPN +TYIAVLSACSH GL+ EG ++FRSM  +HG++ RMEHYA
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           CMVDLL RSG + EALEFI  MPL AD LVW+T LGACR H + E+G+ AA+ ++E +P+
Sbjct: 592 CMVDLLARSGLVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEIAAKNVIELEPR 651

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           DPA ++LLSNLYA AG W+ VA IR  M++ NL KE G SW+E +N  H+F  G+TSHP+
Sbjct: 652 DPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPR 711

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             +IY +LD L  +IK  GY+PDT+ VLH++ +E K QYL QHSEKIAVAFGLI+TS  K
Sbjct: 712 AQDIYGKLDTLVGEIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPK 771

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           PIR+FKNLRVC DCH+AIKY+S  T REI+LRDSNRFH +KDG+CSC +YW
Sbjct: 772 PIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 150/556 (26%), Positives = 261/556 (46%), Gaps = 77/556 (13%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           LD + + G  PD  T S ++ +C    +  LG  +HSL  R     ++ +   L+ +Y+K
Sbjct: 243 LDFL-EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGFASDACVSCGLVDMYAK 301

Query: 126 CG---DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH-MFVEMLELGFCPNEY 181
                 ++ ANK+F+ M  K D++SW+++IS YV  G Q + +  +F EML     PN  
Sbjct: 302 SNIEQAMDYANKVFERM-RKNDVISWTALISGYVQSGVQENKVMVLFGEMLNESIKPNHI 360

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            +S++++AC+N  +   G  ++  ++K     +   VG AL+ M+ +    +E A +VF+
Sbjct: 361 TYSSILKACANISDHDSGRQVHAHVIKSNQAAAHT-VGNALVSMYAESGC-MEEARRVFN 418

Query: 242 KMTEKNTVGWTLMITRCTQLG--CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           ++ E++ +        C   G   P D     +DM +S       T + ++SA + + + 
Sbjct: 419 QLYERSMIS-------CITEGRDAPLDHRIGRMDMGISS-----STFASLISAAASVGML 466

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
           T G+QLH+  ++ G   D  V  SLV MY++C   G ++D+ + F+ + D NV+SWT++I
Sbjct: 467 TKGQQLHAMTLKAGFGSDRFVSNSLVSMYSRC---GYLEDACRSFNELKDRNVISWTSMI 523

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +G  + G  ++ A+ LF DMI   V PN  T+ +VL AC ++      ++ Y  +++R  
Sbjct: 524 SGLAKHGYAER-ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE-YFRSMQRDH 581

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
            L                RME                Y  MVD  A++   ++A E ++E
Sbjct: 582 GLIP--------------RME---------------HYACMVDLLARSGLVKEALEFINE 612

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +    +   A  + +LL    S   I  GE I A+ +      +   Y  L ++Y+    
Sbjct: 613 MP---LKADALVWKTLLGACRSHDNIEVGE-IAAKNVIELEPRDPAPYVLLSNLYADAGL 668

Query: 540 VEAAFQVFKEMEDRNV-----ISWTSMITGFAKHGFAA------RALEIFYKM--LADGI 586
            +   ++   M D N+     +SW  M      H F A      RA +I+ K+  L   I
Sbjct: 669 WDEVARIRSAMRDNNLNKETGLSW--MEVENTTHEFRAGDTSHPRAQDIYGKLDTLVGEI 726

Query: 587 KPNGITYIAVLSACSH 602
           K  G+ Y+   S   H
Sbjct: 727 K--GMGYVPDTSIVLH 740


>gi|326504484|dbj|BAJ91074.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 823

 Score =  813 bits (2099), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 397/769 (51%), Positives = 533/769 (69%), Gaps = 9/769 (1%)

Query: 96  LGKLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           LG+ +H  LL    L+ ++++ NSL+++YSKCG +  A ++F  M   RD+VSW++M   
Sbjct: 61  LGRALHRRLLGTEVLDADALVANSLLTMYSKCGHVRAARRVFDGMRGLRDLVSWTAMAFC 120

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV-AIGHIIYGFLLKCGYFD 213
               G + +A+ +  EMLE G  PN +   A   AC   E   + G  + GF +K G++ 
Sbjct: 121 LTRNGAEQEALVLLGEMLESGLRPNAFTLCAAAHACFPGELFRSSGGTVLGFAIKTGFWG 180

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +DV VGCALIDMF +   DL +A KVF+ + E+  V WTLMITR  Q GC   A+ LFL 
Sbjct: 181 TDVSVGCALIDMFARNG-DLVAARKVFNGLVERTVVVWTLMITRYVQGGCAGKAVELFLG 239

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M+  GF PD +T+S +VSAC+E      G+QLHS  +R GL  D CV C LVDMY K  +
Sbjct: 240 MLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSDTCVSCGLVDMYTKLQM 299

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
           + S++ +RKVF RM  HNVMSWTA+I+GYVQ GG++  AV+L  +M+   + PNH T++S
Sbjct: 300 EQSMECARKVFKRMPTHNVMSWTALISGYVQCGGQENNAVELLCEMLNESIEPNHLTYSS 359

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           +LKAC NL D +   Q++   +K      + VGN+L+SMYA SG ME+ARKAF+ L+E+N
Sbjct: 360 LLKACANLSDQDSGRQIHARVMKTSIGNVNVVGNALVSMYAESGCMEEARKAFDQLYERN 419

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           L+S ++ +    ++  S  +     +IE   VG S +TFASLLS A+++G   KG+Q+HA
Sbjct: 420 LLSTSSDIGETGRSNASWSS-----QIESMDVGVSTFTFASLLSAAATVGLPTKGQQLHA 474

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAA 572
             IK+GFES+  I N+L+SMYSRC  ++ A + F EMED  NVISWTS+I+  AKHG A 
Sbjct: 475 LSIKTGFESDKGISNSLVSMYSRCGYLDDACRAFDEMEDDHNVISWTSIISALAKHGHAE 534

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           RAL +F+ M+  G+KPN +TYIAVLSACSH GL+ EG ++FRSM  +H ++ RMEHYACM
Sbjct: 535 RALSLFHDMILSGVKPNDVTYIAVLSACSHVGLVKEGKEYFRSMQKDHRLIPRMEHYACM 594

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           VDLL RSG + EALEFI  MP  AD LVW+T LGACR + + E+G+ AA  +++ +PQDP
Sbjct: 595 VDLLARSGLVQEALEFINEMPCKADALVWKTLLGACRTYENIEIGEIAARHVIDLEPQDP 654

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
           A ++LLSNLYA  G W+ VA IR  M+ RNL KE G SW+   N +H+F  G+TSHP+  
Sbjct: 655 APYVLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSWMHVGNTIHEFRAGDTSHPRAQ 714

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           EIYA+L  L  +IK+ GY+PDT+ VLH++ ++ K Q L QHSEKIAVAFGLI+T  +KPI
Sbjct: 715 EIYAKLAVLIREIKDIGYVPDTSIVLHDMSDKLKEQCLLQHSEKIAVAFGLITTLPTKPI 774

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R+FKNLRVC DCH+AIKYIS  TGREI+LRDSNRFH +KDGKCSC +YW
Sbjct: 775 RIFKNLRVCADCHSAIKYISKSTGREIILRDSNRFHRMKDGKCSCGEYW 823



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 154/545 (28%), Positives = 261/545 (47%), Gaps = 64/545 (11%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G   KA+     M + G  PD  T S ++ +C    +  LG+ +HSL+ R  L  +
Sbjct: 224 YVQGGCAGKAVELFLGMLEDGFEPDGYTMSSMVSACAEQGSAGLGQQLHSLVLRLGLVSD 283

Query: 113 SVILNSLISLYSKC---GDLNEANKIFKSMGNKRDIVSWSSMISSYVN-RGKQVDAIHMF 168
           + +   L+ +Y+K      +  A K+FK M    +++SW+++IS YV   G++ +A+ + 
Sbjct: 284 TCVSCGLVDMYTKLQMEQSMECARKVFKRMPT-HNVMSWTALISGYVQCGGQENNAVELL 342

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            EML     PN   +S++++AC+N  +   G  I+  ++K    + +V VG AL+ M+ +
Sbjct: 343 CEMLNESIEPNHLTYSSLLKACANLSDQDSGRQIHARVMKTSIGNVNV-VGNALVSMYAE 401

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
               +E A K FD++ E+N +  +  I    +      +    +D+ +S      FT + 
Sbjct: 402 SGC-MEEARKAFDQLYERNLLSTSSDIGETGRSNASWSSQIESMDVGVS-----TFTFAS 455

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++SA + + L T G+QLH+ +I+TG   D  +  SLV MY++C   G +DD+ + FD M 
Sbjct: 456 LLSAAATVGLPTKGQQLHALSIKTGFESDKGISNSLVSMYSRC---GYLDDACRAFDEME 512

Query: 349 -DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            DHNV+SWT+II+   + G  ++ A+ LF DMI   V PN  T+ +VL AC         
Sbjct: 513 DDHNVISWTSIISALAKHGHAER-ALSLFHDMILSGVKPNDVTYIAVLSACS-------- 563

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
              +   VK G+             Y RS + +D R          +  Y  MVD  A++
Sbjct: 564 ---HVGLVKEGKE------------YFRSMQ-KDHR------LIPRMEHYACMVDLLARS 601

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              ++A E ++E+        A  + +LL    +   I  GE I AR +      +   Y
Sbjct: 602 GLVQEALEFINEMP---CKADALVWKTLLGACRTYENIEIGE-IAARHVIDLEPQDPAPY 657

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNV-----ISWTSMITGFAKHGFAA------RALE 576
             L ++Y+     +   ++   M  RN+     +SW  M  G   H F A      RA E
Sbjct: 658 VLLSNLYAHGGLWDEVARIRSLMRHRNLSKETGLSW--MHVGNTIHEFRAGDTSHPRAQE 715

Query: 577 IFYKM 581
           I+ K+
Sbjct: 716 IYAKL 720


>gi|125551253|gb|EAY96962.1| hypothetical protein OsI_18881 [Oryza sativa Indica Group]
          Length = 822

 Score =  810 bits (2091), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 393/771 (50%), Positives = 532/771 (69%), Gaps = 13/771 (1%)

Query: 93  NFHLGKLVHSLLTRSKL-EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
           +  LG+ +H  L R  L + ++V+ NSL++LYS+CG +  A  +F  M   RDIVSW++M
Sbjct: 63  DLRLGRALHRRLLRGDLLDRDAVVANSLLTLYSRCGAVASARNVFDGMRGLRDIVSWTAM 122

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-KCG 210
            S     G +  ++ +  EMLE G  PN Y   A   AC   E   +   +   L+ K G
Sbjct: 123 ASCLARNGAERGSLLLIGEMLESGLLPNAYTLCAAAHACFPHELYCLVGGVVLGLVHKMG 182

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
            + +DV VG ALIDM  +   DL SA KVFD + EK  V WTL+I+R  Q  C  +A+ L
Sbjct: 183 LWGTDVAVGSALIDMLARNG-DLASARKVFDGLIEKTVVVWTLLISRYVQGECAEEAVEL 241

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           FLD +  GF PDR+T+S ++SAC+EL     G QLHS A+R GLA D CV C LVDMYAK
Sbjct: 242 FLDFLEDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAK 301

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
             +  ++D + KVF+RM  ++V+SWTA+I+GYVQSG ++ + + LF +M+   + PNH T
Sbjct: 302 SNIGQAMDYANKVFERMPKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHIT 361

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           ++S+LK+C ++ D +   QV+ H +K  +A    VGN+L+SMYA SG ME+AR+ F  L+
Sbjct: 362 YSSILKSCASISDHDSGRQVHAHVIKSNQASAHTVGNALVSMYAESGCMEEARRVFNQLY 421

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E++++   T            + F L H I    VG S+ TFASL+S A+S+G + KG+Q
Sbjct: 422 ERSMIPCIT----------EGRDFPLDHRIVRMDVGISSSTFASLISAAASVGMLTKGQQ 471

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA  +K+GF S+  + N+L+SMYSRC  +E A + F E++DRNVISWTSMI+G AKHG+
Sbjct: 472 LHAMSLKAGFGSDRFVSNSLVSMYSRCGYLEDACRSFNELKDRNVISWTSMISGLAKHGY 531

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
           A RAL +F+ M+  G+KPN +TYIAVLSACSH GL+ EG ++FRSM  +HG++ RMEHYA
Sbjct: 532 AERALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKEYFRSMQRDHGLIPRMEHYA 591

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           CMVDLL RSG + EALEFI  MPL AD LVW+T LGACR H + E+G+  A+ ++E +P+
Sbjct: 592 CMVDLLARSGIVKEALEFINEMPLKADALVWKTLLGACRSHDNIEVGEITAKNVVELEPR 651

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           DPA ++LLSNLYA AG W+ VA IR  M++ NL KE G SW+E +N  H+F  G+TSHP+
Sbjct: 652 DPAPYVLLSNLYADAGLWDEVARIRSAMRDNNLNKETGLSWMEVENTTHEFRAGDTSHPR 711

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             +IY +LD L  +IK  GY+PDT+ VLH++ +E K QYL QHSEKIAVAFGLI+TS  K
Sbjct: 712 AQDIYGKLDTLVRQIKGMGYVPDTSIVLHDMSDELKEQYLLQHSEKIAVAFGLITTSAPK 771

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           PIR+FKNLRVC DCH+AIKY+S  T REI+LRDSNRFH +KDG+CSC +YW
Sbjct: 772 PIRIFKNLRVCADCHSAIKYMSKATRREIILRDSNRFHRMKDGECSCGEYW 822



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 145/554 (26%), Positives = 262/554 (47%), Gaps = 73/554 (13%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           LD + + G  PD  T S ++ +C    +  LG  +HSL  R  L  ++ +   L+ +Y+K
Sbjct: 243 LDFL-EDGFEPDRYTMSSMISACTELGSVRLGLQLHSLALRMGLASDACVSCGLVDMYAK 301

Query: 126 CG---DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI-HMFVEMLELGFCPNEY 181
                 ++ ANK+F+ M  K D++SW+++IS YV  G Q + +  +F EML     PN  
Sbjct: 302 SNIGQAMDYANKVFERM-PKNDVISWTALISGYVQSGVQENKVMALFGEMLNESIKPNHI 360

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            +S+++++C++  +   G  ++  ++K     +   VG AL+ M+ +    +E A +VF+
Sbjct: 361 TYSSILKSCASISDHDSGRQVHAHVIKSNQASAHT-VGNALVSMYAESGC-MEEARRVFN 418

Query: 242 KMTEKNTVGWTLMITRCTQLG--CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           ++ E++ +        C   G   P D   + +D+ +S       T + ++SA + + + 
Sbjct: 419 QLYERSMIP-------CITEGRDFPLDHRIVRMDVGISS-----STFASLISAAASVGML 466

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
           T G+QLH+ +++ G   D  V  SLV MY++C   G ++D+ + F+ + D NV+SWT++I
Sbjct: 467 TKGQQLHAMSLKAGFGSDRFVSNSLVSMYSRC---GYLEDACRSFNELKDRNVISWTSMI 523

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +G  + G  ++ A+ LF DMI   V PN  T+ +VL AC ++      ++ Y  +++R  
Sbjct: 524 SGLAKHGYAER-ALSLFHDMILTGVKPNDVTYIAVLSACSHVGLVREGKE-YFRSMQRDH 581

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
            L                RME                Y  MVD  A++   ++A E ++E
Sbjct: 582 GLIP--------------RME---------------HYACMVDLLARSGIVKEALEFINE 612

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +    +   A  + +LL    S   I  GE I A+ +      +   Y  L ++Y+    
Sbjct: 613 MP---LKADALVWKTLLGACRSHDNIEVGE-ITAKNVVELEPRDPAPYVLLSNLYADAGL 668

Query: 540 VEAAFQVFKEMEDRNV-----ISWTSMITGFAKHGFAA------RALEIFYKMLADGIKP 588
            +   ++   M D N+     +SW  M      H F A      RA +I+ K+     + 
Sbjct: 669 WDEVARIRSAMRDNNLNKETGLSW--MEVENTTHEFRAGDTSHPRAQDIYGKLDTLVRQI 726

Query: 589 NGITYIAVLSACSH 602
            G+ Y+   S   H
Sbjct: 727 KGMGYVPDTSIVLH 740


>gi|255562005|ref|XP_002522011.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538815|gb|EEF40415.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 585

 Score =  792 bits (2046), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 399/585 (68%), Positives = 466/585 (79%), Gaps = 9/585 (1%)

Query: 1   MMTLSLP--APAKIPPPSSFKPSN-PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDG 57
           MM+LSLP  +PAK+P     KP+N  SRQN PP   P   +  + S  L+ RLI HL  G
Sbjct: 1   MMSLSLPTVSPAKLP----LKPNNQSSRQNQPPPPPPS--SAHSDSHSLNTRLINHLKAG 54

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
            + KAI  LD+MTQ   HPDL TYSLLLKSCIRS NF  GKLVH+ LT+S LE +SVILN
Sbjct: 55  HLSKAIIALDVMTQNNTHPDLITYSLLLKSCIRSNNFQKGKLVHNCLTQSGLELDSVILN 114

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           SLISLYSKCG+LN AN IF SMGNKRD+VSWS++IS Y   G + DAI ++++ML  GF 
Sbjct: 115 SLISLYSKCGELNSANDIFISMGNKRDLVSWSALISCYATNGLEFDAIRVYIDMLVSGFF 174

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           PNEYC+SAVI++CSN EN + G II+G L+KCGY +S VCVGCALIDM+ KG  D+E A 
Sbjct: 175 PNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCGYLNSHVCVGCALIDMYAKGCGDVEGAC 234

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           KVFD M+E+N V WTLMI+R  QLG  RDAI LF  MI SGF+PD +TLSGVVSAC+EL 
Sbjct: 235 KVFDNMSERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYTLSGVVSACAELG 294

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           L + GK+LHSWAI++GL  DVCVGCSLVDMYAKC VDGS+DDSRKVFDRM +HNVMSWTA
Sbjct: 295 LLSLGKELHSWAIKSGLVYDVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMTNHNVMSWTA 354

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           IITGYVQ+G  D EA +LF +MI+G V PNHFTF+S+LKAC NL D ++ EQ Y HAVK 
Sbjct: 355 IITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGEQFYAHAVKL 414

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G A  +CVGNSLISMY+R   ME+ARKAF+ LFEKNLVSYNT+V+AYAK LNSE+AFEL 
Sbjct: 415 GFASVNCVGNSLISMYSRCDNMENARKAFDVLFEKNLVSYNTIVEAYAKGLNSEEAFELF 474

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
           +EIEDTG   +A+TFASLLSGASSIGAIGKGEQIHARI+KS F++N  I NALISMYSRC
Sbjct: 475 NEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTNLHISNALISMYSRC 534

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
            ++EAAFQVF  M DRNVISWTSMITG+AKHGFA RALE F+KML
Sbjct: 535 GDIEAAFQVFNGMGDRNVISWTSMITGYAKHGFAVRALETFHKML 579



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 155/502 (30%), Positives = 282/502 (56%), Gaps = 15/502 (2%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+   +S ++++C  + N   G +++  L + G  + D  +  +LI ++ K   +L SA 
Sbjct: 73  PDLITYSLLLKSCIRSNNFQKGKLVHNCLTQSG-LELDSVILNSLISLYSKCG-ELNSAN 130

Query: 238 KVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +F  M  K + V W+ +I+     G   DAIR+++DM++SGF P+ +  S V+ +CS  
Sbjct: 131 DIFISMGNKRDLVSWSALISCYATNGLEFDAIRVYIDMLVSGFFPNEYCYSAVIKSCSNR 190

Query: 297 ELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           E F+ G+ +    I+ G L   VCVGC+L+DMYAK    G V+ + KVFD M + N+++W
Sbjct: 191 ENFSYGEIIFGSLIKCGYLNSHVCVGCALIDMYAKGC--GDVEGACKVFDNMSERNIVTW 248

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           T +I+ + Q  G  ++A+ LF+ MI     P+++T + V+ AC  L   ++ +++++ A+
Sbjct: 249 TLMISRF-QQLGYYRDAIDLFNHMIFSGFMPDNYTLSGVVSACAELGLLSLGKELHSWAI 307

Query: 416 KRGRALDDCVGNSLISMYAR---SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE- 471
           K G   D CVG SL+ MYA+    G ++D+RK F+ +   N++S+  ++  Y +N  S+ 
Sbjct: 308 KSGLVYDVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMTNHNVMSWTAIITGYVQNGRSDM 367

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A EL  E+ +  V  + +TF+S+L   +++  +  GEQ +A  +K GF S +C+ N+LI
Sbjct: 368 EATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGEQFYAHAVKLGFASVNCVGNSLI 427

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           SMYSRC N+E A + F  + ++N++S+ +++  +AK   +  A E+F ++   G   N  
Sbjct: 428 SMYSRCDNMENARKAFDVLFEKNLVSYNTIVEAYAKGLNSEEAFELFNEIEDTGFVVNAF 487

Query: 592 TYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           T+ ++LS  S  G I +G + H R +  +      + +   ++ +  R G +  A +   
Sbjct: 488 TFASLLSGASSIGAIGKGEQIHARILKSDFKTNLHISN--ALISMYSRCGDIEAAFQVFN 545

Query: 651 SMPLSADVLVWRTFLGACRVHG 672
            M    +V+ W + +     HG
Sbjct: 546 GMG-DRNVISWTSMITGYAKHG 566



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 145/420 (34%), Positives = 244/420 (58%), Gaps = 11/420 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH-SLLTRSKLEPNSVILNSLISLYSK-C 126
           M   G  P+   YS ++KSC    NF  G+++  SL+    L  +  +  +LI +Y+K C
Sbjct: 168 MLVSGFFPNEYCYSAVIKSCSNRENFSYGEIIFGSLIKCGYLNSHVCVGCALIDMYAKGC 227

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           GD+  A K+F +M ++R+IV+W+ MIS +   G   DAI +F  M+  GF P+ Y  S V
Sbjct: 228 GDVEGACKVFDNM-SERNIVTWTLMISRFQQLGYYRDAIDLFNHMIFSGFMPDNYTLSGV 286

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD--LESAYKVFDKMT 244
           + AC+    +++G  ++ + +K G    DVCVGC+L+DM+ K +VD  L+ + KVFD+MT
Sbjct: 287 VSACAELGLLSLGKELHSWAIKSGLV-YDVCVGCSLVDMYAKCAVDGSLDDSRKVFDRMT 345

Query: 245 EKNTVGWTLMITRCTQLG-CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
             N + WT +IT   Q G    +A  LFL+MI     P+ FT S ++ AC+ L     G+
Sbjct: 346 NHNVMSWTAIITGYVQNGRSDMEATELFLEMIEGHVKPNHFTFSSILKACANLSDLHLGE 405

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q ++ A++ G A   CVG SL+ MY++C    +++++RK FD + + N++S+  I+  Y 
Sbjct: 406 QFYAHAVKLGFASVNCVGNSLISMYSRCD---NMENARKAFDVLFEKNLVSYNTIVEAYA 462

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           + G   +EA +LF+++       N FTFAS+L    ++      EQ++   +K     + 
Sbjct: 463 K-GLNSEEAFELFNEIEDTGFVVNAFTFASLLSGASSIGAIGKGEQIHARILKSDFKTNL 521

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            + N+LISMY+R G +E A + F  + ++N++S+ +M+  YAK+  + +A E  H++ +T
Sbjct: 522 HISNALISMYSRCGDIEAAFQVFNGMGDRNVISWTSMITGYAKHGFAVRALETFHKMLET 581


>gi|359490688|ref|XP_003634143.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Vitis vinifera]
          Length = 631

 Score =  688 bits (1775), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 344/504 (68%), Positives = 395/504 (78%), Gaps = 11/504 (2%)

Query: 1   MMTLSLPAPAKIPPPSSFKPSNPSRQNLPPSS----SPPFIAQPTTSEPLSNRLIYHLND 56
           M+TLSLP+PA+   P S K  NPSRQN+ PSS    +P F       EPL NRLI  L+ 
Sbjct: 1   MITLSLPSPAQPLLPPSSKTLNPSRQNIIPSSLSLKNPNF-------EPLKNRLIRQLDV 53

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR+  A  TLDLMTQ+   PDL TYS+LLKSCIR RNF LGKLVH  L +S LE +SV+L
Sbjct: 54  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 113

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LISLYSKCGD   A  IF+ MGNKRD+VSWS+M+S + N   ++ AI  F++MLELGF
Sbjct: 114 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGF 173

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PNEYCF+AVIRACSN  +  +G IIYGF++K GY ++DVCVGC LIDMFVKGS DL SA
Sbjct: 174 YPNEYCFAAVIRACSNANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 233

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           YKVFDKM E+N V WTLMITR  QLGC RDAI LFLDM LSG++PDRFT S V+SAC+EL
Sbjct: 234 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 293

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L   GKQLHS  IR GLALDVCVGCSLVDMYAKC  DGSVDDSRKVF+RM +HNVMSWT
Sbjct: 294 GLLALGKQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWT 353

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           AIIT YVQSG  DKEA++LF  MI G + PNHF+F+SVLKACGNL D    EQVY++AVK
Sbjct: 354 AIITAYVQSGECDKEAIELFCKMISGHIWPNHFSFSSVLKACGNLSDPYTGEQVYSYAVK 413

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G A  +CVGNSLISMYARSGRMEDARKAF+ LFEKNLVSYN +VD YAKNL SE+AF L
Sbjct: 414 LGIASVNCVGNSLISMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLL 473

Query: 477 LHEIEDTGVGTSAYTFASLLSGAS 500
            +EI DTG+G SA+TFASLLSGA+
Sbjct: 474 FNEIADTGIGISAFTFASLLSGAA 497



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/430 (31%), Positives = 247/430 (57%), Gaps = 11/430 (2%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+   +S ++++C    N  +G +++  L++ G  + D  V   LI ++ K   D E+A 
Sbjct: 73  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSG-LELDSVVLNTLISLYSKCG-DTETAR 130

Query: 238 KVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +F+ M  K + V W+ M++          AI  FLDM+  GF P+ +  + V+ ACS  
Sbjct: 131 LIFEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGFYPNEYCFAAVIRACSNA 190

Query: 297 ELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                G+ ++ + ++TG L  DVCVGC L+DM+ K +  G +  + KVFD+M + N+++W
Sbjct: 191 NHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGS--GDLGSAYKVFDKMPERNLVTW 248

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           T +IT + Q G   ++A+ LF DM      P+ FT++SVL AC  L    + +Q+++  +
Sbjct: 249 TLMITRFAQLGCA-RDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVI 307

Query: 416 KRGRALDDCVGNSLISMYAR---SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + G ALD CVG SL+ MYA+    G ++D+RK FE + E N++S+  ++ AY ++   +K
Sbjct: 308 RLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIITAYVQSGECDK 367

Query: 473 -AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            A EL  ++    +  + ++F+S+L    ++     GEQ+++  +K G  S +C+ N+LI
Sbjct: 368 EAIELFCKMISGHIWPNHFSFSSVLKACGNLSDPYTGEQVYSYAVKLGIASVNCVGNSLI 427

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           SMY+R   +E A + F  + ++N++S+ +++ G+AK+  +  A  +F ++   GI  +  
Sbjct: 428 SMYARSGRMEDARKAFDILFEKNLVSYNAIVDGYAKNLKSEEAFLLFNEIADTGIGISAF 487

Query: 592 TYIAVLSACS 601
           T+ ++LS  +
Sbjct: 488 TFASLLSGAA 497



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/329 (32%), Positives = 196/329 (59%), Gaps = 11/329 (3%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD  T S ++ +C     F  GK +H   +++GL LD  V  +L+ +Y+KC   G  + +
Sbjct: 73  PDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVLNTLISLYSKC---GDTETA 129

Query: 341 RKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           R +F+ M +  +++SW+A+++ +  +   + +A+  F DM++    PN + FA+V++AC 
Sbjct: 130 RLIFEGMGNKRDLVSWSAMVSCFANNS-MELQAIWTFLDMLELGFYPNEYCFAAVIRACS 188

Query: 400 NLLDSNVAEQVYTHAVKRGR-ALDDCVGNSLISMYAR-SGRMEDARKAFESLFEKNLVSY 457
           N   + V E +Y   VK G    D CVG  LI M+ + SG +  A K F+ + E+NLV++
Sbjct: 189 NANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSAYKVFDKMPERNLVTW 248

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+  +A+   +  A +L  ++E +G     +T++S+LS  + +G +  G+Q+H+R+I+
Sbjct: 249 TLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTELGLLALGKQLHSRVIR 308

Query: 518 SGFESNHCIYNALISMYSRCA---NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR- 573
            G   + C+  +L+ MY++CA   +V+ + +VF+ M + NV+SWT++IT + + G   + 
Sbjct: 309 LGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMPEHNVMSWTAIITAYVQSGECDKE 368

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A+E+F KM++  I PN  ++ +VL AC +
Sbjct: 369 AIELFCKMISGHIWPNHFSFSSVLKACGN 397



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 169/323 (52%), Gaps = 10/323 (3%)

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           GR   A      M Q    P+  T++ +LK+C    +  + + V+   ++ G  LD  V 
Sbjct: 54  GRLHHAFSTLDLMTQQNAPPDLTTYSILLKSCIRFRNFQLGKLVHRKLMQSGLELDSVVL 113

Query: 427 NSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
           N+LIS+Y++ G  E AR  FE +  K +LVS++ MV  +A N    +A     ++ + G 
Sbjct: 114 NTLISLYSKCGDTETARLIFEGMGNKRDLVSWSAMVSCFANNSMELQAIWTFLDMLELGF 173

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF-ESNHCIYNALISMYSR-CANVEAA 543
             + Y FA+++   S+      GE I+  ++K+G+ E++ C+   LI M+ +   ++ +A
Sbjct: 174 YPNEYCFAAVIRACSNANHAWVGEIIYGFVVKTGYLEADVCVGCELIDMFVKGSGDLGSA 233

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
           ++VF +M +RN+++WT MIT FA+ G A  A+++F  M   G  P+  TY +VLSAC+  
Sbjct: 234 YKVFDKMPERNLVTWTLMITRFAQLGCARDAIDLFLDMELSGYVPDRFTYSSVLSACTEL 293

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR---SGSLTEALEFIRSMPLSADVLV 660
           GL++ G K   S     G+   +     +VD+  +    GS+ ++ +    MP   +V+ 
Sbjct: 294 GLLALG-KQLHSRVIRLGLALDVCVGCSLVDMYAKCAADGSVDDSRKVFERMP-EHNVMS 351

Query: 661 WRTFLGACRVHGDTELGKHAAEM 683
           W   + A    G+ +  K A E+
Sbjct: 352 WTAIITAYVQSGECD--KEAIEL 372


>gi|328774757|gb|AEB39778.1| pentatricopeptide repeat protein 77 [Funaria hygrometrica]
          Length = 1161

 Score =  653 bits (1684), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/815 (40%), Positives = 507/815 (62%), Gaps = 8/815 (0%)

Query: 48   NRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
            N LI  L   G  ++A      M   G   +  TY  +L +C  S+    G+L+HS ++ 
Sbjct: 354  NALIAALAQHGHYEEAFEQYYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISE 413

Query: 107  SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
                 +  I NSLIS+Y++CGDL  A ++F +M  KRD++SW+++I+ Y  R  + +A+ 
Sbjct: 414  VGHSSDVQIGNSLISMYARCGDLPRARELFNTM-PKRDLISWNAIIAGYARREDRGEAMK 472

Query: 167  MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
            ++ +M   G  P    F  ++ AC+N+   + G +I+  +L+ G   S+  +  AL++M+
Sbjct: 473  LYKQMQSEGVKPGRVTFLHLLSACTNSSAYSDGKMIHEDILRSG-IKSNGHLANALMNMY 531

Query: 227  VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
             +    +E A  VF+    ++ + W  MI    Q G    A +LFL+M   G  PD+ T 
Sbjct: 532  RRCGSIME-AQNVFEGTRARDIISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITF 590

Query: 287  SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
            + V+  C   E    G+Q+H   I +GL LDV +G +L++MY +C   GS+ D+ +VF  
Sbjct: 591  ASVLVGCKNPEALELGRQIHMLIIESGLQLDVNLGNALINMYIRC---GSLQDAYEVFHS 647

Query: 347  MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
            +   NVMSWTA+I G+   G  D++A +LF  M      P   TF+S+LKAC +    + 
Sbjct: 648  LRHRNVMSWTAMIGGFADQG-EDRKAFELFWQMQNDGFKPVKSTFSSILKACMSSACLDE 706

Query: 407  AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             ++V  H +  G  LD  VGN+LIS Y++SG M DARK F+ +  ++++S+N M+  YA+
Sbjct: 707  GKKVIAHILNSGYELDTGVGNALISAYSKSGSMTDARKVFDKMPNRDIMSWNKMIAGYAQ 766

Query: 467  NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
            N     A +  +++++ GV  + ++F S+L+  SS  A+ +G+++HA I+K   + +  +
Sbjct: 767  NGLGGTALQFAYQMQEQGVVLNKFSFVSILNACSSFSALEEGKRVHAEIVKRKMQGDVRV 826

Query: 527  YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
              ALISMY++C ++E A +VF    ++NV++W +MI  +A+HG A++AL+ F  M  +GI
Sbjct: 827  GAALISMYAKCGSLEEAQEVFDNFTEKNVVTWNAMINAYAQHGLASKALDFFNCMDKEGI 886

Query: 587  KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
            KP+G T+ ++LSAC+H+GL+ EG + F S+  +HG+   +EHY C+V LLGR+G   EA 
Sbjct: 887  KPDGSTFTSILSACNHSGLVMEGNRIFSSLESQHGLSPTIEHYGCLVGLLGRAGRFQEAE 946

Query: 647  EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
              I  MP   D  VW T LGACR+HG+  L +HAA   L+ + ++PA ++LLSN+YA+AG
Sbjct: 947  TLINQMPFPPDAAVWETLLGACRIHGNVALAEHAANNALKLNARNPAVYVLLSNVYAAAG 1006

Query: 707  HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
             W+ VA IR+ M+ R + KE G SWIE DN +H+F   + SHP+T EIY EL +L+L+++
Sbjct: 1007 RWDDVAKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYEELKRLSLEME 1066

Query: 767  EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
              GY PDT +VLH L++E +   L  HSE++A+A+GL+ T    PIR+FKNLR+CGDCHT
Sbjct: 1067 RAGYSPDTQYVLHNLDKEHQETSLCTHSERLAIAYGLLKTPPGTPIRIFKNLRICGDCHT 1126

Query: 827  AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            A K+IS + GREI+ RDSNRFH  K+GKCSC D+W
Sbjct: 1127 ASKFISKLVGREIIARDSNRFHTFKNGKCSCEDFW 1161



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 179/594 (30%), Positives = 317/594 (53%), Gaps = 9/594 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
            Y  L+++C R R+    K +H+ +  + + P+  + N LI++Y KC  +++A+++F  M
Sbjct: 84  AYVDLVQNCTRKRSLAEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKM 143

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +RD++SW+S+IS Y  +G +  A  +F EM   GF P++  + +++ AC +   +  G
Sbjct: 144 -PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG 202

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+  +++ GY   D  V  +L++M+ K   DL SA +VF  +  ++ V +  M+    
Sbjct: 203 KKIHSKIIEAGY-QRDPRVQNSLLNMYGKCE-DLPSARQVFSGIYRRDVVSYNTMLGLYA 260

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q     + I LF  M   G  PD+ T   ++ A +   +   GK++H  A+  GL  D+ 
Sbjct: 261 QKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEGLNSDIR 320

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG +L  M+ +C   G V  +++  +   D +V+ + A+I    Q G  + EA + +  M
Sbjct: 321 VGTALATMFVRC---GDVAGAKQALEAFADRDVVVYNALIAALAQHGHYE-EAFEQYYQM 376

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               V  N  T+ SVL AC         E +++H  + G + D  +GNSLISMYAR G +
Sbjct: 377 RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARCGDL 436

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             AR+ F ++ +++L+S+N ++  YA+  +  +A +L  +++  GV     TF  LLS  
Sbjct: 437 PRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHLLSAC 496

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           ++  A   G+ IH  I++SG +SN  + NAL++MY RC ++  A  VF+    R++ISW 
Sbjct: 497 TNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDIISWN 556

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           SMI G A+HG    A ++F +M  +G++P+ IT+ +VL  C +   +  G +    +  E
Sbjct: 557 SMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELG-RQIHMLIIE 615

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            G+   +     ++++  R GSL +A E   S+    +V+ W   +G     G+
Sbjct: 616 SGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLR-HRNVMSWTAMIGGFADQGE 668



 Score =  303 bits (776), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 193/656 (29%), Positives = 337/656 (51%), Gaps = 13/656 (1%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F+  P       N LI  +   G  +KA    + M   G  P   TY  +L +C      
Sbjct: 140 FLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAEL 199

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             GK +HS +  +  + +  + NSL+++Y KC DL  A ++F  +  +RD+VS+++M+  
Sbjct: 200 EYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCEDLPSARQVFSGI-YRRDVVSYNTMLGL 258

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y  +    + I +F +M   G  P++  +  ++ A +    +  G  I+   +  G  +S
Sbjct: 259 YAQKAYVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDEGKRIHKLAVNEG-LNS 317

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+ VG AL  MFV+   D+  A +  +   +++ V +  +I    Q G   +A   +  M
Sbjct: 318 DIRVGTALATMFVRCG-DVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQYYQM 376

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
              G + +R T   V++ACS  +   +G+ +HS     G + DV +G SL+ MYA+C   
Sbjct: 377 RSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYARC--- 433

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G +  +R++F+ M   +++SW AII GY +   R  EA+KL+  M    V P   TF  +
Sbjct: 434 GDLPRARELFNTMPKRDLISWNAIIAGYARREDRG-EAMKLYKQMQSEGVKPGRVTFLHL 492

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L AC N    +  + ++   ++ G   +  + N+L++MY R G + +A+  FE    +++
Sbjct: 493 LSACTNSSAYSDGKMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTRARDI 552

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +S+N+M+  +A++ + E A++L  E++  G+     TFAS+L G  +  A+  G QIH  
Sbjct: 553 ISWNSMIAGHAQHGSYEAAYKLFLEMKKEGLEPDKITFASVLVGCKNPEALELGRQIHML 612

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           II+SG + +  + NALI+MY RC +++ A++VF  +  RNV+SWT+MI GFA  G   +A
Sbjct: 613 IIESGLQLDVNLGNALINMYIRCGSLQDAYEVFHSLRHRNVMSWTAMIGGFADQGEDRKA 672

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
            E+F++M  DG KP   T+ ++L AC  +  + EG K    + +  G          ++ 
Sbjct: 673 FELFWQMQNDGFKPVKSTFSSILKACMSSACLDEGKKVIAHILNS-GYELDTGVGNALIS 731

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
              +SGS+T+A +    MP + D++ W   +     +G   LG  A +   +   Q
Sbjct: 732 AYSKSGSMTDARKVFDKMP-NRDIMSWNKMIAGYAQNG---LGGTALQFAYQMQEQ 783



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 267/499 (53%), Gaps = 12/499 (2%)

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N   +  +++ C+   ++A    I+  +++ G    D+ +   LI+M+VK    +  A++
Sbjct: 81  NRAAYVDLVQNCTRKRSLAEAKRIHAQMVEAG-VGPDIFLSNLLINMYVK-CRSVSDAHQ 138

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VF KM  ++ + W  +I+   Q G  + A +LF +M  +GF+P + T   +++AC     
Sbjct: 139 VFLKMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQTAGFIPSKITYISILTACCSPAE 198

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              GK++HS  I  G   D  V  SL++MY KC     +  +R+VF  +   +V+S+  +
Sbjct: 199 LEYGKKIHSKIIEAGYQRDPRVQNSLLNMYGKCE---DLPSARQVFSGIYRRDVVSYNTM 255

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA--CGNLLDSNVAEQVYTHAVK 416
           +  Y Q     +E + LF  M    + P+  T+ ++L A    ++LD    ++++  AV 
Sbjct: 256 LGLYAQKA-YVEECIGLFGQMSSEGIPPDKVTYINLLDAFTTPSMLDE--GKRIHKLAVN 312

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   D  VG +L +M+ R G +  A++A E+  ++++V YN ++ A A++ + E+AFE 
Sbjct: 313 EGLNSDIRVGTALATMFVRCGDVAGAKQALEAFADRDVVVYNALIAALAQHGHYEEAFEQ 372

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
            +++   GV  +  T+ S+L+  S+  A+G GE IH+ I + G  S+  I N+LISMY+R
Sbjct: 373 YYQMRSDGVVMNRTTYLSVLNACSTSKALGAGELIHSHISEVGHSSDVQIGNSLISMYAR 432

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C ++  A ++F  M  R++ISW ++I G+A+      A++++ +M ++G+KP  +T++ +
Sbjct: 433 CGDLPRARELFNTMPKRDLISWNAIIAGYARREDRGEAMKLYKQMQSEGVKPGRVTFLHL 492

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           LSAC+++   S+G K         GI         ++++  R GS+ EA         + 
Sbjct: 493 LSACTNSSAYSDG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSIMEAQNVFEGTR-AR 550

Query: 657 DVLVWRTFLGACRVHGDTE 675
           D++ W + +     HG  E
Sbjct: 551 DIISWNSMIAGHAQHGSYE 569



 Score = 95.5 bits (236), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/214 (28%), Positives = 109/214 (50%), Gaps = 5/214 (2%)

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           NLVS   M D   +    E   +L +  +     T+   +  L+   +   ++ + ++IH
Sbjct: 49  NLVSVKVMRDEQHRGSERE---DLSNAYQPRPTETNRAAYVDLVQNCTRKRSLAEAKRIH 105

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           A+++++G   +  + N LI+MY +C +V  A QVF +M  R+VISW S+I+ +A+ GF  
Sbjct: 106 AQMVEAGVGPDIFLSNLLINMYVKCRSVSDAHQVFLKMPRRDVISWNSLISCYAQQGFKK 165

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           +A ++F +M   G  P+ ITYI++L+AC     +  G K   S   E G  +       +
Sbjct: 166 KAFQLFEEMQTAGFIPSKITYISILTACCSPAELEYG-KKIHSKIIEAGYQRDPRVQNSL 224

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
           +++ G+   L  A +    +    DV+ + T LG
Sbjct: 225 LNMYGKCEDLPSARQVFSGI-YRRDVVSYNTMLG 257


>gi|168056582|ref|XP_001780298.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668246|gb|EDQ54857.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 986

 Score =  648 bits (1671), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 323/810 (39%), Positives = 507/810 (62%), Gaps = 10/810 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G  ++A    + M Q    PD  T+  +L +C  +RN   G+ +++L+ ++  + +
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +LI+++ KCGD+ +A K+F ++   RD+V+W+SMI+     G+   A ++F  M 
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPT-RDLVTWTSMITGLARHGRFKQACNLFQRME 304

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           E G  P++  F +++RAC++ E +  G  ++  + + G+ D+++ VG A++ M+ K GS 
Sbjct: 305 EEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGS- 362

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E A +VFD +  +N V WT MI    Q G   +A   F  MI SG  P+R T   ++ 
Sbjct: 363 -MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILG 421

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS       G+Q+    I  G   D  V  +L+ MYAKC   GS+ D+ +VF+++   N
Sbjct: 422 ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC---GSLKDAHRVFEKISKQN 478

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V++W A+IT YVQ    D  A+  F  +++  + PN  TF S+L  C +     + + V+
Sbjct: 479 VVAWNAMITAYVQHEQYDN-ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH 537

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K G   D  V N+L+SM+   G +  A+  F  + +++LVS+NT++  + ++  ++
Sbjct: 538 FLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQ 597

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            AF+    ++++G+     TF  LL+  +S  A+ +G ++HA I ++ F+ +  +   LI
Sbjct: 598 VAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLI 657

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           SMY++C ++E A QVF ++  +NV SWTSMITG+A+HG    ALE+FY+M  +G+KP+ I
Sbjct: 658 SMYTKCGSIEDAHQVFHKLPKKNVYSWTSMITGYAQHGRGKEALELFYQMQQEGVKPDWI 717

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++  LSAC+HAGLI EG  HF+SM  E  I  RMEHY CMVDL GR+G L EA+EFI  
Sbjct: 718 TFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIK 776

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M +  D  VW   LGAC+VH + EL + AA+  LE DP D    ++LSN+YA+AG W+ V
Sbjct: 777 MQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEV 836

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           A +RK M +R ++K+ G SWIE D KVH F+  + +HP+T EI+AEL++L +++++ GY+
Sbjct: 837 AKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYV 896

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PDT +VLH++E+ +K Q LF HSE++A+ +GL+ T    PI + KNLRVCGDCHTA K+I
Sbjct: 897 PDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFI 956

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S +T R+I+ RDSNRFHH KDG CSC D+W
Sbjct: 957 SKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  353 bits (906), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 206/657 (31%), Positives = 361/657 (54%), Gaps = 19/657 (2%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TYS LL+ CI+ +N   G+ +++ + +S ++P+  + N+LI++Y+KCG+   A +IF  M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMWNTLINMYAKCGNTISAKQIFDDM 171

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             ++D+ SW+ ++  YV  G   +A  +  +M++    P++  F +++ AC++  NV  G
Sbjct: 172 -REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             +Y  +LK G+ D+D+ VG ALI+M +K   D+  A KVFD +  ++ V WT MIT   
Sbjct: 231 RELYNLILKAGW-DTDLFVGTALINMHIKCG-DIGDATKVFDNLPTRDLVTWTSMITGLA 288

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           + G  + A  LF  M   G  PD+     ++ AC+  E    GK++H+     G   ++ 
Sbjct: 289 RHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG +++ MY KC   GS++D+ +VFD +   NV+SWTA+I G+ Q  GR  EA   F+ M
Sbjct: 349 VGTAILSMYTKC---GSMEDALEVFDLVKGRNVVSWTAMIAGFAQH-GRIDEAFLFFNKM 404

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           I+  + PN  TF S+L AC +       +Q+  H ++ G   DD V  +L+SMYA+ G +
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSL 464

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           +DA + FE + ++N+V++N M+ AY ++   + A      +   G+  ++ TF S+L+  
Sbjct: 465 KDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
            S  ++  G+ +H  I+K+G ES+  + NAL+SM+  C ++ +A  +F +M  R+++SW 
Sbjct: 525 KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWN 584

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           ++I GF +HG    A + F  M   GIKP+ IT+  +L+AC+    ++EG +   ++  E
Sbjct: 585 TIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG-RRLHALITE 643

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
                 +     ++ +  + GS+ +A +    +P   +V  W + +     HG    GK 
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMITGYAQHGR---GKE 699

Query: 680 AAEMI--LEQDPQDPAAHILLSNLY--ASAGHWEYVANIRKRMKERNL---IKEAGC 729
           A E+   ++Q+   P     +  L   A AG  E   +  + MKE N+   ++  GC
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGC 756



 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 297/571 (52%), Gaps = 42/571 (7%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N++++  SK G  NEA ++ +                       +VD+ H+ +       
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLE-----------------------RVDSSHIQI------- 108

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
                 +SA+++ C   +N+  G  IY  + K G    D+ +   LI+M+ K    + SA
Sbjct: 109 --YRQTYSALLQLCIKFKNLGDGERIYNHIKKSG-VQPDIFMWNTLINMYAKCGNTI-SA 164

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            ++FD M EK+   W L++    Q G   +A +L   M+     PD+ T   +++AC++ 
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G++L++  ++ G   D+ VG +L++M+ KC   G + D+ KVFD +   ++++WT
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC---GDIGDATKVFDNLPTRDLVTWT 281

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++ITG  +  GR K+A  LF  M +  V P+   F S+L+AC +       ++V+    +
Sbjct: 282 SMITGLARH-GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   +  VG +++SMY + G MEDA + F+ +  +N+VS+  M+  +A++   ++AF  
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
            +++ ++G+  +  TF S+L   SS  A+ +G+QI   II++G+ S+  +  AL+SMY++
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C +++ A +VF+++  +NV++W +MIT + +H     AL  F  +L +GIKPN  T+ ++
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520

Query: 597 LSACSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           L+ C  +  +  G W HF  M  + G+   +     +V +    G L  A      MP  
Sbjct: 521 LNVCKSSDSLELGKWVHFLIM--KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-K 577

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
            D++ W T +     HG  ++     +M+ E
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 233/426 (54%), Gaps = 6/426 (1%)

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           K+T     ++ R ++ G   +A+++   +  S     R T S ++  C + +    G+++
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           ++   ++G+  D+ +  +L++MYAKC   G+   ++++FD M + +V SW  ++ GYVQ 
Sbjct: 133 YNHIKKSGVQPDIFMWNTLINMYAKC---GNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G  + EA KL   M+Q  V P+  TF S+L AC +  + +   ++Y   +K G   D  V
Sbjct: 190 GLYE-EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV 248

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
           G +LI+M+ + G + DA K F++L  ++LV++ +M+   A++   ++A  L   +E+ GV
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
                 F SLL   +   A+ +G+++HAR+ + G+++   +  A++SMY++C ++E A +
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           VF  ++ RNV+SWT+MI GFA+HG    A   F KM+  GI+PN +T++++L ACS    
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           +  G +  +    E G          ++ +  + GSL +A      +    +V+ W   +
Sbjct: 429 LKRG-QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMI 486

Query: 666 GACRVH 671
            A   H
Sbjct: 487 TAYVQH 492


>gi|54695180|dbj|BAD67155.1| PpPPR_98 [Physcomitrella patens]
          Length = 986

 Score =  646 bits (1666), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/810 (39%), Positives = 506/810 (62%), Gaps = 10/810 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G  ++A    + M Q    PD  T+  +L +C  +RN   G+ +++L+ ++  + +
Sbjct: 186 YVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTD 245

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +LI+++ KCGD+ +A K+F ++   RD+V+W+SMI+     G+   A ++F  M 
Sbjct: 246 LFVGTALINMHIKCGDIGDATKVFDNLPT-RDLVTWTSMITGLARHGRFKQACNLFQRME 304

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           E G  P++  F +++RAC++ E +  G  ++  + + G+ D+++ VG A++ M+ K GS 
Sbjct: 305 EEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGW-DTEIYVGTAILSMYTKCGS- 362

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E A +VFD +  +N V WT MI    Q G   +A   F  MI SG  P+R T   ++ 
Sbjct: 363 -MEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILG 421

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS       G+Q+    I  G   D  V  +L+ MYAKC   GS+ D+ +VF+++   N
Sbjct: 422 ACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKC---GSLKDAHRVFEKISKQN 478

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V++W A+IT YVQ    D  A+  F  +++  + PN  TF S+L  C +     + + V+
Sbjct: 479 VVAWNAMITAYVQHEQYDN-ALATFQALLKEGIKPNSSTFTSILNVCKSSDSLELGKWVH 537

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K G   D  V N+L+SM+   G +  A+  F  + +++LVS+NT++  + ++  ++
Sbjct: 538 FLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWNTIIAGFVQHGKNQ 597

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            AF+    ++++G+     TF  LL+  +S  A+ +G ++HA I ++ F+ +  +   LI
Sbjct: 598 VAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEGRRLHALITEAAFDCDVLVGTGLI 657

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           SMY++C ++E A QVF ++  +NV SWTSMI G+A+HG    ALE+FY+M  +G+KP+ I
Sbjct: 658 SMYTKCGSIEDAHQVFHKLPKKNVYSWTSMIAGYAQHGRGKEALELFYQMQQEGVKPDWI 717

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++  LSAC+HAGLI EG  HF+SM  E  I  RMEHY CMVDL GR+G L EA+EFI  
Sbjct: 718 TFVGALSACAHAGLIEEGLHHFQSM-KEFNIEPRMEHYGCMVDLFGRAGLLNEAVEFIIK 776

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M +  D  VW   LGAC+VH + EL + AA+  LE DP D    ++LSN+YA+AG W+ V
Sbjct: 777 MQVEPDSRVWGALLGACQVHLNVELAEKAAQKKLELDPNDNGVFVILSNIYAAAGMWKEV 836

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           A +RK M +R ++K+ G SWIE D KVH F+  + +HP+T EI+AEL++L +++++ GY+
Sbjct: 837 AKMRKVMLDRGVVKKPGQSWIEVDGKVHTFYSDDKTHPQTEEIHAELERLHMEMRQLGYV 896

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PDT +VLH++E+ +K Q LF HSE++A+ +GL+ T    PI + KNLRVCGDCHTA K+I
Sbjct: 897 PDTRYVLHDVEDNEKEQALFYHSERLAITYGLLKTPPLTPIVISKNLRVCGDCHTATKFI 956

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S +T R+I+ RDSNRFHH KDG CSC D+W
Sbjct: 957 SKITKRQIIARDSNRFHHFKDGVCSCGDFW 986



 Score =  353 bits (907), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 206/657 (31%), Positives = 361/657 (54%), Gaps = 19/657 (2%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TYS LL+ CI+ +N   G+ +++ + +S ++P+  + N+LI++Y+KCG+   A +IF  M
Sbjct: 112 TYSALLQLCIKFKNLGDGERIYNHIKKSGVQPDIFMRNTLINMYAKCGNTISAKQIFDDM 171

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             ++D+ SW+ ++  YV  G   +A  +  +M++    P++  F +++ AC++  NV  G
Sbjct: 172 -REKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKG 230

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             +Y  +LK G+ D+D+ VG ALI+M +K   D+  A KVFD +  ++ V WT MIT   
Sbjct: 231 RELYNLILKAGW-DTDLFVGTALINMHIKCG-DIGDATKVFDNLPTRDLVTWTSMITGLA 288

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           + G  + A  LF  M   G  PD+     ++ AC+  E    GK++H+     G   ++ 
Sbjct: 289 RHGRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIY 348

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG +++ MY KC   GS++D+ +VFD +   NV+SWTA+I G+ Q  GR  EA   F+ M
Sbjct: 349 VGTAILSMYTKC---GSMEDALEVFDLVKGRNVVSWTAMIAGFAQH-GRIDEAFLFFNKM 404

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           I+  + PN  TF S+L AC +       +Q+  H ++ G   DD V  +L+SMYA+ G +
Sbjct: 405 IESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAKCGSL 464

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           +DA + FE + ++N+V++N M+ AY ++   + A      +   G+  ++ TF S+L+  
Sbjct: 465 KDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSILNVC 524

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
            S  ++  G+ +H  I+K+G ES+  + NAL+SM+  C ++ +A  +F +M  R+++SW 
Sbjct: 525 KSSDSLELGKWVHFLIMKAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMPKRDLVSWN 584

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           ++I GF +HG    A + F  M   GIKP+ IT+  +L+AC+    ++EG +   ++  E
Sbjct: 585 TIIAGFVQHGKNQVAFDYFKMMQESGIKPDKITFTGLLNACASPEALTEG-RRLHALITE 643

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
                 +     ++ +  + GS+ +A +    +P   +V  W + +     HG    GK 
Sbjct: 644 AAFDCDVLVGTGLISMYTKCGSIEDAHQVFHKLP-KKNVYSWTSMIAGYAQHGR---GKE 699

Query: 680 AAEMI--LEQDPQDPAAHILLSNLY--ASAGHWEYVANIRKRMKERNL---IKEAGC 729
           A E+   ++Q+   P     +  L   A AG  E   +  + MKE N+   ++  GC
Sbjct: 700 ALELFYQMQQEGVKPDWITFVGALSACAHAGLIEEGLHHFQSMKEFNIEPRMEHYGC 756



 Score =  265 bits (678), Expect = 7e-68,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 297/571 (52%), Gaps = 42/571 (7%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N++++  SK G  NEA ++ +                       +VD+ H+ +       
Sbjct: 79  NAVLNRLSKAGQFNEAMQVLE-----------------------RVDSSHIQI------- 108

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
                 +SA+++ C   +N+  G  IY  + K G    D+ +   LI+M+ K    + SA
Sbjct: 109 --YRQTYSALLQLCIKFKNLGDGERIYNHIKKSG-VQPDIFMRNTLINMYAKCGNTI-SA 164

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            ++FD M EK+   W L++    Q G   +A +L   M+     PD+ T   +++AC++ 
Sbjct: 165 KQIFDDMREKDVYSWNLLLGGYVQHGLYEEAFKLHEQMVQDSVKPDKRTFVSMLNACADA 224

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G++L++  ++ G   D+ VG +L++M+ KC   G + D+ KVFD +   ++++WT
Sbjct: 225 RNVDKGRELYNLILKAGWDTDLFVGTALINMHIKC---GDIGDATKVFDNLPTRDLVTWT 281

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++ITG  +  GR K+A  LF  M +  V P+   F S+L+AC +       ++V+    +
Sbjct: 282 SMITGLARH-GRFKQACNLFQRMEEEGVQPDKVAFVSLLRACNHPEALEQGKKVHARMKE 340

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   +  VG +++SMY + G MEDA + F+ +  +N+VS+  M+  +A++   ++AF  
Sbjct: 341 VGWDTEIYVGTAILSMYTKCGSMEDALEVFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLF 400

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
            +++ ++G+  +  TF S+L   SS  A+ +G+QI   II++G+ S+  +  AL+SMY++
Sbjct: 401 FNKMIESGIEPNRVTFMSILGACSSPSALKRGQQIQDHIIEAGYGSDDRVRTALLSMYAK 460

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C +++ A +VF+++  +NV++W +MIT + +H     AL  F  +L +GIKPN  T+ ++
Sbjct: 461 CGSLKDAHRVFEKISKQNVVAWNAMITAYVQHEQYDNALATFQALLKEGIKPNSSTFTSI 520

Query: 597 LSACSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           L+ C  +  +  G W HF  M  + G+   +     +V +    G L  A      MP  
Sbjct: 521 LNVCKSSDSLELGKWVHFLIM--KAGLESDLHVSNALVSMFVNCGDLMSAKNLFNDMP-K 577

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
            D++ W T +     HG  ++     +M+ E
Sbjct: 578 RDLVSWNTIIAGFVQHGKNQVAFDYFKMMQE 608



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 233/426 (54%), Gaps = 6/426 (1%)

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           K+T     ++ R ++ G   +A+++   +  S     R T S ++  C + +    G+++
Sbjct: 73  KDTQKANAVLNRLSKAGQFNEAMQVLERVDSSHIQIYRQTYSALLQLCIKFKNLGDGERI 132

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           ++   ++G+  D+ +  +L++MYAKC   G+   ++++FD M + +V SW  ++ GYVQ 
Sbjct: 133 YNHIKKSGVQPDIFMRNTLINMYAKC---GNTISAKQIFDDMREKDVYSWNLLLGGYVQH 189

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G  + EA KL   M+Q  V P+  TF S+L AC +  + +   ++Y   +K G   D  V
Sbjct: 190 GLYE-EAFKLHEQMVQDSVKPDKRTFVSMLNACADARNVDKGRELYNLILKAGWDTDLFV 248

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
           G +LI+M+ + G + DA K F++L  ++LV++ +M+   A++   ++A  L   +E+ GV
Sbjct: 249 GTALINMHIKCGDIGDATKVFDNLPTRDLVTWTSMITGLARHGRFKQACNLFQRMEEEGV 308

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
                 F SLL   +   A+ +G+++HAR+ + G+++   +  A++SMY++C ++E A +
Sbjct: 309 QPDKVAFVSLLRACNHPEALEQGKKVHARMKEVGWDTEIYVGTAILSMYTKCGSMEDALE 368

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           VF  ++ RNV+SWT+MI GFA+HG    A   F KM+  GI+PN +T++++L ACS    
Sbjct: 369 VFDLVKGRNVVSWTAMIAGFAQHGRIDEAFLFFNKMIESGIEPNRVTFMSILGACSSPSA 428

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           +  G +  +    E G          ++ +  + GSL +A      +    +V+ W   +
Sbjct: 429 LKRG-QQIQDHIIEAGYGSDDRVRTALLSMYAKCGSLKDAHRVFEKIS-KQNVVAWNAMI 486

Query: 666 GACRVH 671
            A   H
Sbjct: 487 TAYVQH 492


>gi|78183583|dbj|BAD67156.2| PpPPR_77 [Physcomitrella patens]
          Length = 1106

 Score =  642 bits (1655), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 322/793 (40%), Positives = 494/793 (62%), Gaps = 7/793 (0%)

Query: 69   MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
            M   G   +  TY  +L +C  S+    GKL+HS ++      +  I N+LIS+Y++CGD
Sbjct: 321  MRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 129  LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
            L +A ++F +M  KRD++SW+++I+ Y  R  + +A+ ++ +M   G  P    F  ++ 
Sbjct: 381  LPKARELFYTM-PKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLS 439

Query: 189  ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            AC+N+   A G +I+  +L+ G   S+  +  AL++M+ +    +E A  VF+    ++ 
Sbjct: 440  ACANSSAYADGKMIHEDILRSG-IKSNGHLANALMNMYRRCGSLME-AQNVFEGTQARDV 497

Query: 249  VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
            + W  MI    Q G    A +LF +M      PD  T + V+S C   E    GKQ+H  
Sbjct: 498  ISWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGR 557

Query: 309  AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
               +GL LDV +G +L++MY +C   GS+ D+R VF  +   +VMSWTA+I G    G  
Sbjct: 558  ITESGLQLDVNLGNALINMYIRC---GSLQDARNVFHSLQHRDVMSWTAMIGGCADQG-E 613

Query: 369  DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            D +A++LF  M      P   TF+S+LK C +    +  ++V  + +  G  LD  VGN+
Sbjct: 614  DMKAIELFWQMQNEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGYELDTGVGNA 673

Query: 429  LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
            LIS Y++SG M DAR+ F+ +  +++VS+N ++  YA+N   + A E  +++++  V  +
Sbjct: 674  LISAYSKSGSMTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPN 733

Query: 489  AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             ++F SLL+  SS  A+ +G+++HA I+K   + +  +  ALISMY++C +   A +VF 
Sbjct: 734  KFSFVSLLNACSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKCGSQGEAQEVFD 793

Query: 549  EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
             + ++NV++W +MI  +A+HG A++AL  F  M  +GIKP+G T+ ++LSAC+HAGL+ E
Sbjct: 794  NIIEKNVVTWNAMINAYAQHGLASKALGFFNCMEKEGIKPDGSTFTSILSACNHAGLVLE 853

Query: 609  GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
            G++ F SM  E+G++  +EHY C+V LLGR+    EA   I  MP   D  VW T LGAC
Sbjct: 854  GYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQMPFPPDAAVWETLLGAC 913

Query: 669  RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
            R+HG+  L +HAA   L+ + ++PA +ILLSN+YA+AG W+ VA IR+ M+ R + KE G
Sbjct: 914  RIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDVAKIRRVMEGRGIRKEPG 973

Query: 729  CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
             SWIE DN +H+F   + SHP+T EIYAEL +L+++++E GY PDT  VLH+L +  +  
Sbjct: 974  RSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYFPDTQHVLHDLGKAHQET 1033

Query: 789  YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
             L  HSE++A+A+GLI T    PIR+FKNLR+CGDCHTA K+IS + GREI+ RDSNRFH
Sbjct: 1034 SLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFISKLVGREIIARDSNRFH 1093

Query: 849  HIKDGKCSCNDYW 861
              K+GKCSC DYW
Sbjct: 1094 SFKNGKCSCEDYW 1106



 Score =  316 bits (809), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 185/594 (31%), Positives = 317/594 (53%), Gaps = 9/594 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TY  LL++C R R     K +H+ +  + + P+  + N LI++Y KC  + +A+++FK M
Sbjct: 29  TYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQVFKEM 88

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +RD++SW+S+IS Y  +G +  A  +F EM   GF PN+  + +++ AC +   +  G
Sbjct: 89  -PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+  ++K GY   D  V  +L+ M+ K   DL  A +VF  ++ ++ V +  M+    
Sbjct: 148 KKIHSQIIKAGY-QRDPRVQNSLLSMYGKCG-DLPRARQVFAGISPRDVVSYNTMLGLYA 205

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q    ++ + LF  M   G  PD+ T   ++ A +   +   GK++H   +  GL  D+ 
Sbjct: 206 QKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNSDIR 265

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG +LV M  +C   G VD +++ F    D +V+ + A+I    Q G  + EA + +  M
Sbjct: 266 VGTALVTMCVRC---GDVDSAKQAFKGTADRDVVVYNALIAALAQHG-HNVEAFEQYYRM 321

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               VA N  T+ S+L AC         + +++H  + G + D  +GN+LISMYAR G +
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             AR+ F ++ +++L+S+N ++  YA+  +  +A  L  +++  GV     TF  LLS  
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           ++  A   G+ IH  I++SG +SN  + NAL++MY RC ++  A  VF+  + R+VISW 
Sbjct: 442 ANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWN 501

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           SMI G A+HG    A ++F +M  + ++P+ IT+ +VLS C +   +  G K       E
Sbjct: 502 SMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELG-KQIHGRITE 560

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            G+   +     ++++  R GSL +A     S+    DV+ W   +G C   G+
Sbjct: 561 SGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGCADQGE 613



 Score =  306 bits (783), Expect = 4e-80,   Method: Compositional matrix adjust.
 Identities = 187/639 (29%), Positives = 337/639 (52%), Gaps = 12/639 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G  +KA    + M   G  P+  TY  +L +C        GK +HS + ++  + +
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSL+S+Y KCGDL  A ++F  + + RD+VS+++M+  Y  +    + + +F +M 
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGI-SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMS 221

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P++  +  ++ A +    +  G  I+   ++ G  +SD+ VG AL+ M V+   D
Sbjct: 222 SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG-LNSDIRVGTALVTMCVRCG-D 279

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++SA + F    +++ V +  +I    Q G   +A   +  M   G   +R T   +++A
Sbjct: 280 VDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNA 339

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS  +   +GK +HS     G + DV +G +L+ MYA+C   G +  +R++F  M   ++
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC---GDLPKARELFYTMPKRDL 396

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW AII GY +   R  EA++L+  M    V P   TF  +L AC N       + ++ 
Sbjct: 397 ISWNAIIAGYARREDRG-EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             ++ G   +  + N+L++MY R G + +A+  FE    ++++S+N+M+  +A++ + E 
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A++L  E+++  +     TFAS+LSG  +  A+  G+QIH RI +SG + +  + NALI+
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY RC +++ A  VF  ++ R+V+SWT+MI G A  G   +A+E+F++M  +G +P   T
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPVKST 635

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           + ++L  C+ +  + EG K    + +  G          ++    +SGS+T+A E    M
Sbjct: 636 FSSILKVCTSSACLDEGKKVIAYILNS-GYELDTGVGNALISAYSKSGSMTDAREVFDKM 694

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           P S D++ W   +     +G   LG+ A E   +   QD
Sbjct: 695 P-SRDIVSWNKIIAGYAQNG---LGQTAVEFAYQMQEQD 729



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 205/386 (53%), Gaps = 6/386 (1%)

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           +R T   ++  C+   L    K++H+  +   +  D+ +   L++MY KC    SV D+ 
Sbjct: 26  ERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCR---SVLDAH 82

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           +VF  M   +V+SW ++I+ Y Q G + K+A +LF +M      PN  T+ S+L AC + 
Sbjct: 83  QVFKEMPRRDVISWNSLISCYAQQGFK-KKAFQLFEEMQNAGFIPNKITYISILTACYSP 141

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
            +    +++++  +K G   D  V NSL+SMY + G +  AR+ F  +  +++VSYNTM+
Sbjct: 142 AELENGKKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGISPRDVVSYNTML 201

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
             YA+    ++   L  ++   G+     T+ +LL   ++   + +G++IH   ++ G  
Sbjct: 202 GLYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLN 261

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           S+  +  AL++M  RC +V++A Q FK   DR+V+ + ++I   A+HG    A E +Y+M
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGTADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
            +DG+  N  TY+++L+ACS +  +  G K   S   E G    ++    ++ +  R G 
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAG-KLIHSHISEDGHSSDVQIGNALISMYARCGD 380

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGA 667
           L +A E   +MP   D++ W   +  
Sbjct: 381 LPKARELFYTMP-KRDLISWNAIIAG 405



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 189/346 (54%), Gaps = 7/346 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  + A      M  +   PD  T++ +L  C       LGK +H  +T S L+ +
Sbjct: 507 HAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLD 566

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+LI++Y +CG L +A  +F S+   RD++SW++MI    ++G+ + AI +F +M 
Sbjct: 567 VNLGNALINMYIRCGSLQDARNVFHSL-QHRDVMSWTAMIGGCADQGEDMKAIELFWQMQ 625

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             GF P +  FS++++ C+++  +  G  +  ++L  GY + D  VG ALI  + K S  
Sbjct: 626 NEGFRPVKSTFSSILKVCTSSACLDEGKKVIAYILNSGY-ELDTGVGNALISAYSK-SGS 683

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A +VFDKM  ++ V W  +I    Q G  + A+     M     +P++F+   +++A
Sbjct: 684 MTDAREVFDKMPSRDIVSWNKIIAGYAQNGLGQTAVEFAYQMQEQDVVPNKFSFVSLLNA 743

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS       GK++H+  ++  L  DV VG +L+ MYAKC   GS  ++++VFD +++ NV
Sbjct: 744 CSSFSALEEGKRVHAEIVKRKLQGDVRVGAALISMYAKC---GSQGEAQEVFDNIIEKNV 800

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           ++W A+I  Y Q G   K A+  F+ M +  + P+  TF S+L AC
Sbjct: 801 VTWNAMINAYAQHGLASK-ALGFFNCMEKEGIKPDGSTFTSILSAC 845



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/180 (31%), Positives = 97/180 (53%), Gaps = 2/180 (1%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T   T+ +LL   +    + + ++IHA+++++    +  + N LI+MY +C +V  A QV
Sbjct: 25  TERATYVALLQNCTRKRLLPEAKRIHAQMVEAWVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           FKEM  R+VISW S+I+ +A+ GF  +A ++F +M   G  PN ITYI++L+AC     +
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             G K   S   + G  +       ++ + G+ G L  A +    +    DV+ + T LG
Sbjct: 145 ENG-KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTMLG 202


>gi|224077074|ref|XP_002305120.1| predicted protein [Populus trichocarpa]
 gi|222848084|gb|EEE85631.1| predicted protein [Populus trichocarpa]
          Length = 786

 Score =  640 bits (1650), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 316/778 (40%), Positives = 491/778 (63%), Gaps = 7/778 (0%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +LK+C  +++  LGK VH ++  +  + +  + NSL+ LY+KCG   +A  +F ++ + R
Sbjct: 16  VLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKCGGFGDARSLFDAIPD-R 74

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW+++ S YV+     +A+ +F +M+  G  PNE+  S++I  C+  E+   G  I+
Sbjct: 75  SVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIH 134

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G+L+K GY DSD     AL+DM+ K  + LE A  VFD++ + + V W  +I  C     
Sbjct: 135 GYLIKLGY-DSDAFSANALVDMYAKVGI-LEDASSVFDEIAKPDIVSWNAIIAGCVLHEY 192

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
              A+ L  +M  SG  P+ FTLS  + AC+ + L   G+QLHS  I+  +  D  +G  
Sbjct: 193 HHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVG 252

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMY+KC    S+DD+R VF  M + ++++W A+I+G+ Q+   D+EA  LF  M    
Sbjct: 253 LIDMYSKCN---SMDDARLVFKLMPERDMIAWNAVISGHSQNE-EDEEAASLFPLMHTEG 308

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           +  N  T ++VLK+   L  + +  Q++  ++K G   D+ V NSLI  Y + G +EDA 
Sbjct: 309 IGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDTYGKCGHVEDAT 368

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           + FE     +LV + ++V AYA++   E+A  L  E++D G+   ++  +SLL+  +S+ 
Sbjct: 369 RVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLS 428

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           A  +G+Q+H  I+K GF S+    N+L++MY++C ++E A   F  +  R ++SW++MI 
Sbjct: 429 AYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIG 488

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           G A+HG+   AL++F +ML  G+ PN IT ++VL AC+HAGL++E   +F SM    GI 
Sbjct: 489 GLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVAEAKHYFNSMKILFGIE 548

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
              EHYACM+DLLGR+G L  A+E +  MP  A+ LVW   LGA R+H + +LG+ AAEM
Sbjct: 549 PMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQAAEM 608

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           +L  +P+    H+LL+N+YAS G W+ VA +R+ MK+  + KE G SW+E  +KV+ F V
Sbjct: 609 LLALEPEKSGTHVLLANIYASVGMWDKVARVRRLMKDGKVKKEPGMSWLEVKDKVYTFIV 668

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+ SH ++ EIYA+LD+L+  +K+ GY+P     LH++E  +K Q L+ HSEK+AVAFGL
Sbjct: 669 GDRSHSRSTEIYAKLDELSDLLKKAGYVPMVEIDLHDVERSEKEQLLYHHSEKLAVAFGL 728

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           I+T    PIRV KNLR+C DCHT +K+IS +  REI++RD+NRFHH ++G CSC +YW
Sbjct: 729 IATPPGAPIRVKKNLRICFDCHTVLKFISKIVSREIIVRDTNRFHHFREGSCSCGEYW 786



 Score =  257 bits (656), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 156/543 (28%), Positives = 289/543 (53%), Gaps = 12/543 (2%)

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           LG   NE+ F +V++AC+ T+++ +G  ++G ++  G FDSD  V  +L+ ++ K     
Sbjct: 4   LGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTG-FDSDEFVANSLVILYAKCG-GF 61

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A  +FD + +++ V W  + +         +A+ LF DM+LSG  P+ F+LS +++ C
Sbjct: 62  GDARSLFDAIPDRSVVSWNALFSCYVHSDMHGEAVSLFHDMVLSGIRPNEFSLSSMINVC 121

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + LE    G+++H + I+ G   D     +LVDMYAK    G ++D+  VFD +   +++
Sbjct: 122 TGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKV---GILEDASSVFDEIAKPDIV 178

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW AII G V      + A++L  +M +  + PN FT +S LKAC  +    +  Q+++ 
Sbjct: 179 SWNAIIAGCVLHEYHHR-ALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSS 237

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K     D  +G  LI MY++   M+DAR  F+ + E++++++N ++  +++N   E+A
Sbjct: 238 LIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEEA 297

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L   +   G+G +  T +++L   +++ A     QIHA  +KSGFE ++ + N+LI  
Sbjct: 298 ASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLIDT 357

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y +C +VE A +VF+E    +++ +TS++T +A+ G    AL ++ +M   GIKP+    
Sbjct: 358 YGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVC 417

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            ++L+AC+      +G K       + G +  +     +V++  + GS+ +A      +P
Sbjct: 418 SSLLNACASLSAYEQG-KQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ-DPQDPAAHILLSNLYASAGHWEYVA 712
           +   ++ W   +G    HG    GK A ++  +      P  HI L ++  +  H   VA
Sbjct: 477 VRG-IVSWSAMIGGLAQHG---YGKEALQLFKQMLKVGVPPNHITLVSVLCACNHAGLVA 532

Query: 713 NIR 715
             +
Sbjct: 533 EAK 535



 Score =  212 bits (539), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 138/496 (27%), Positives = 259/496 (52%), Gaps = 9/496 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  + S ++  C    +   G+ +H  L +   + ++   N+L+ +Y+K G 
Sbjct: 102 MVLSGIRPNEFSLSSMINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGI 161

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L +A+ +F  +  K DIVSW+++I+  V       A+ +  EM + G CPN +  S+ ++
Sbjct: 162 LEDASSVFDEIA-KPDIVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALK 220

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC+      +G  ++  L+K     SD  +G  LIDM+ K +  ++ A  VF  M E++ 
Sbjct: 221 ACAGMALRELGRQLHSSLIKMD-MGSDSFLGVGLIDMYSKCN-SMDDARLVFKLMPERDM 278

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           + W  +I+  +Q     +A  LF  M   G   ++ TLS V+ + + L+     +Q+H+ 
Sbjct: 279 IAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHAL 338

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           ++++G   D  V  SL+D Y KC   G V+D+ +VF+     +++ +T+++T Y Q  G+
Sbjct: 339 SLKSGFEFDNYVVNSLIDTYGKC---GHVEDATRVFEESPIVDLVLFTSLVTAYAQD-GQ 394

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            +EA++L+ +M    + P+ F  +S+L AC +L      +QV+ H +K G   D   GNS
Sbjct: 395 GEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNS 454

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L++MYA+ G +EDA  AF  +  + +VS++ M+   A++   ++A +L  ++   GV  +
Sbjct: 455 LVNMYAKCGSIEDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPN 514

Query: 489 AYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             T  S+L   +  G + + +   ++  I  G E     Y  +I +  R   +EAA ++ 
Sbjct: 515 HITLVSVLCACNHAGLVAEAKHYFNSMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELV 574

Query: 548 KEME-DRNVISWTSMI 562
            +M    N + W +++
Sbjct: 575 NKMPFQANALVWGALL 590



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 139/485 (28%), Positives = 226/485 (46%), Gaps = 38/485 (7%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M L G   + F    V+ AC+  +    GKQ+H   + TG   D  V  SLV +YAKC  
Sbjct: 1   MHLLGIKCNEFAFPSVLKACTVTKDLVLGKQVHGIVVVTGFDSDEFVANSLVILYAKC-- 58

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G   D+R +FD + D +V+SW A+ + YV S     EAV LF DM+   + PN F+ +S
Sbjct: 59  -GGFGDARSLFDAIPDRSVVSWNALFSCYVHS-DMHGEAVSLFHDMVLSGIRPNEFSLSS 116

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           ++  C  L DS    +++ + +K G   D    N+L+ MYA+ G +EDA   F+ + + +
Sbjct: 117 MINVCTGLEDSVQGRKIHGYLIKLGYDSDAFSANALVDMYAKVGILEDASSVFDEIAKPD 176

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +VS+N ++     +    +A ELL E+  +G+  + +T +S L   + +     G Q+H+
Sbjct: 177 IVSWNAIIAGCVLHEYHHRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHS 236

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
            +IK    S+  +   LI MYS+C +++ A  VFK M +R++I+W ++I+G +++     
Sbjct: 237 SLIKMDMGSDSFLGVGLIDMYSKCNSMDDARLVFKLMPERDMIAWNAVISGHSQNEEDEE 296

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACS-----------HAGLISEGWKH----FRSMYD 618
           A  +F  M  +GI  N  T   VL + +           HA  +  G++       S+ D
Sbjct: 297 AASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFDNYVVNSLID 356

Query: 619 EHGIVQRMEH---------------YACMVDLLGRSGSLTEALEFIRSMP---LSADVLV 660
            +G    +E                +  +V    + G   EAL     M    +  D  V
Sbjct: 357 TYGKCGHVEDATRVFEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFV 416

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
             + L AC      E GK     IL+     D  A   L N+YA  G  E  +    R+ 
Sbjct: 417 CSSLLNACASLSAYEQGKQVHVHILKFGFMSDIFAGNSLVNMYAKCGSIEDASCAFSRIP 476

Query: 720 ERNLI 724
            R ++
Sbjct: 477 VRGIV 481



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 136/435 (31%), Positives = 234/435 (53%), Gaps = 16/435 (3%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            +A+  L  M + G  P++ T S  LK+C       LG+ +HS L +  +  +S +   L
Sbjct: 194 HRALELLREMNKSGMCPNMFTLSSALKACAGMALRELGRQLHSSLIKMDMGSDSFLGVGL 253

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I +YSKC  +++A  +FK M  +RD+++W+++IS +    +  +A  +F  M   G   N
Sbjct: 254 IDMYSKCNSMDDARLVFKLM-PERDMIAWNAVISGHSQNEEDEEAASLFPLMHTEGIGFN 312

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           +   S V+++ +  +   +   I+   LK G F+ D  V  +LID + K    +E A +V
Sbjct: 313 QTTLSTVLKSIAALQANYMCRQIHALSLKSG-FEFDNYVVNSLIDTYGKCG-HVEDATRV 370

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F++    + V +T ++T   Q G   +A+RL+L+M   G  PD F  S +++AC+ L  +
Sbjct: 371 FEESPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQDRGIKPDSFVCSSLLNACASLSAY 430

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GKQ+H   ++ G   D+  G SLV+MYAKC   GS++D+   F R+    ++SW+A+I
Sbjct: 431 EQGKQVHVHILKFGFMSDIFAGNSLVNMYAKC---GSIEDASCAFSRIPVRGIVSWSAMI 487

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE-QVYTHAVKRG 418
            G  Q  G  KEA++LF  M++  V PNH T  SVL AC +     VAE + Y +++K  
Sbjct: 488 GGLAQH-GYGKEALQLFKQMLKVGVPPNHITLVSVLCACNHA--GLVAEAKHYFNSMKIL 544

Query: 419 RALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN-SEK 472
             ++    +   +I +  R+G++E A +    + F+ N + +  ++ A    KN++  E+
Sbjct: 545 FGIEPMQEHYACMIDLLGRAGKLEAAMELVNKMPFQANALVWGALLGAARIHKNIDLGEQ 604

Query: 473 AFELLHEIEDTGVGT 487
           A E+L  +E    GT
Sbjct: 605 AAEMLLALEPEKSGT 619



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 79/314 (25%), Positives = 161/314 (51%), Gaps = 18/314 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H  +   ++A     LM  +G   +  T S +LKS    +  ++ + +H+L  +S  E +
Sbjct: 288 HSQNEEDEEAASLFPLMHTEGIGFNQTTLSTVLKSIAALQANYMCRQIHALSLKSGFEFD 347

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + ++NSLI  Y KCG + +A ++F+      D+V ++S++++Y   G+  +A+ +++EM 
Sbjct: 348 NYVVNSLIDTYGKCGHVEDATRVFEE-SPIVDLVLFTSLVTAYAQDGQGEEALRLYLEMQ 406

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G  P+ +  S+++ AC++      G  ++  +LK G+  SD+  G +L++M+ K GS+
Sbjct: 407 DRGIKPDSFVCSSLLNACASLSAYEQGKQVHVHILKFGFM-SDIFAGNSLVNMYAKCGSI 465

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
             E A   F ++  +  V W+ MI    Q G  ++A++LF  M+  G  P+  TL  V+ 
Sbjct: 466 --EDASCAFSRIPVRGIVSWSAMIGGLAQHGYGKEALQLFKQMLKVGVPPNHITLVSVLC 523

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDR 346
           AC+   L    K   +       ++ +  G   +  +  C +D     G ++ + ++ ++
Sbjct: 524 ACNHAGLVAEAKHYFN-------SMKILFGIEPMQEHYACMIDLLGRAGKLEAAMELVNK 576

Query: 347 M-LDHNVMSWTAII 359
           M    N + W A++
Sbjct: 577 MPFQANALVWGALL 590


>gi|328774763|gb|AEB39781.1| pentatricopeptide repeat protein 79 [Funaria hygrometrica]
          Length = 820

 Score =  633 bits (1632), Expect = e-178,   Method: Compositional matrix adjust.
 Identities = 317/798 (39%), Positives = 496/798 (62%), Gaps = 9/798 (1%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            L  + QKG+  D   Y  LL+SC+++++  +GK VH  + R  ++PN  I+N+L+ LY 
Sbjct: 31  VLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLYV 90

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
            CG +NEA ++F    NK  +VSW+ MIS Y +RG   +A ++F  M + G  P+++ F 
Sbjct: 91  HCGSVNEARRLFDKFSNK-SVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKM 243
           +++ ACS+   +  G  ++  +++ G   ++  VG ALI M+ K GSV    A +VFD M
Sbjct: 150 SILSACSSPAALNWGREVHVRVMEAG-LANNATVGNALISMYAKCGSV--RDARRVFDAM 206

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
             ++ V WT +     + G  +++++ +  M+  G  P R T   V+SAC  L     GK
Sbjct: 207 ASRDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGK 266

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+  + +    DV V  +L  MY KC   G+V D+R+VF+ + + +V++W  +I G V
Sbjct: 267 QIHAQIVESEHHSDVRVSTALTKMYIKC---GAVKDAREVFECLPNRDVIAWNTMIGGLV 323

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            SG + +EA  +F  M++  VAP+  T+ ++L AC         ++++  AVK G   D 
Sbjct: 324 DSG-QLEEAHGMFHRMLKECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLVSDV 382

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
             GN+LI+MY+++G M+DAR+ F+ + ++++VS+  +V  YA      ++F    ++   
Sbjct: 383 RFGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQ 442

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           GV  +  T+  +L   S+  A+  G++IHA ++K+G  ++  + NAL+SMY +C +VE A
Sbjct: 443 GVEANKITYMCVLKACSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKCGSVEDA 502

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +V + M  R+V++W ++I G A++G    AL+ F  M ++ ++PN  T++ V+SAC   
Sbjct: 503 IRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVR 562

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
            L+ EG + F SM  ++GIV   +HYACMVD+L R+G L EA + I +MP      +W  
Sbjct: 563 NLVEEGRRQFASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGA 622

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L ACR HG+ E+G+ AAE  L+ +PQ+   ++ LS +YA+AG W  VA +RK MKER +
Sbjct: 623 LLAACRAHGNVEIGEQAAEQCLKLEPQNAGTYVSLSFIYAAAGMWRDVAKLRKLMKERGV 682

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            KE G SWIE   +VH F  G+ SHP+T EIY+EL+ L  +IK  GY+PDT FV+H+L++
Sbjct: 683 KKEPGRSWIEVAGEVHSFVAGDQSHPRTEEIYSELEALTKQIKSLGYVPDTRFVMHDLDQ 742

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E K + +  HSEK+A+A+GLIST    PIRV KNLRVC DCHTA K+IS +TGREI+ RD
Sbjct: 743 EGKERAVCHHSEKLAIAYGLISTPPETPIRVSKNLRVCTDCHTATKFISKITGREIIARD 802

Query: 844 SNRFHHIKDGKCSCNDYW 861
           ++RFHH K+G+CSC DYW
Sbjct: 803 AHRFHHFKNGECSCGDYW 820



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 163/572 (28%), Positives = 291/572 (50%), Gaps = 19/572 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  Q+A     LM Q+G  PD  T+  +L +C      + G+ VH  +  + L  N+ + 
Sbjct: 124 GLGQEAFNLFTLMQQEGLEPDKFTFVSILSACSSPAALNWGREVHVRVMEAGLANNATVG 183

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LIS+Y+KCG + +A ++F +M + RD VSW+++  +Y   G   +++  +  ML+ G 
Sbjct: 184 NALISMYAKCGSVRDARRVFDAMAS-RDEVSWTTLTGAYAESGYAQESLKTYHAMLQEGV 242

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            P+   +  V+ AC +   +  G  I+  +++  +  SDV V  AL  M++K G+V  + 
Sbjct: 243 RPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHH-SDVRVSTALTKMYIKCGAV--KD 299

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VF+ +  ++ + W  MI      G   +A  +F  M+     PDR T   ++SAC+ 
Sbjct: 300 AREVFECLPNRDVIAWNTMIGGLVDSGQLEEAHGMFHRMLKECVAPDRVTYLAILSACAR 359

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 GK++H+ A++ GL  DV  G +L++MY+K    GS+ D+R+VFDRM   +V+SW
Sbjct: 360 PGGLACGKEIHARAVKDGLVSDVRFGNALINMYSKA---GSMKDARQVFDRMPKRDVVSW 416

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           TA++ GY    G+  E+   F  M+Q  V  N  T+  VLKAC N +     ++++   V
Sbjct: 417 TALVGGYADC-GQVVESFSTFKKMLQQGVEANKITYMCVLKACSNPVALKWGKEIHAEVV 475

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K G   D  V N+L+SMY + G +EDA +  E +  +++V++NT++   A+N    +A +
Sbjct: 476 KAGIFADLAVANALMSMYFKCGSVEDAIRVSEGMSTRDVVTWNTLIGGLAQNGRGLEALQ 535

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMY 534
               ++   +  +A TF +++S       + +G +  A + K  G       Y  ++ + 
Sbjct: 536 KFEVMKSEEMRPNATTFVNVMSACRVRNLVEEGRRQFASMRKDYGIVPTEKHYACMVDIL 595

Query: 535 SRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPNG 590
           +R  ++  A  V   M  + +   W +++     HG      +A E   K+       N 
Sbjct: 596 ARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGNVEIGEQAAEQCLKLEPQ----NA 651

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            TY+++    + AG+  +  K  R +  E G+
Sbjct: 652 GTYVSLSFIYAAAGMWRDVAK-LRKLMKERGV 682



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/456 (27%), Positives = 228/456 (50%), Gaps = 16/456 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G  Q+++ T   M Q+G  P   TY  +L +C        GK +H+ +  S+   +
Sbjct: 221 YAESGYAQESLKTYHAMLQEGVRPSRITYMNVLSACGSLAALEKGKQIHAQIVESEHHSD 280

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +L  +Y KCG + +A ++F+ + N RD+++W++MI   V+ G+  +A  MF  ML
Sbjct: 281 VRVSTALTKMYIKCGAVKDAREVFECLPN-RDVIAWNTMIGGLVDSGQLEEAHGMFHRML 339

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +    P+   + A++ AC+    +A G  I+   +K G   SDV  G ALI+M+ K    
Sbjct: 340 KECVAPDRVTYLAILSACARPGGLACGKEIHARAVKDGLV-SDVRFGNALINMYSKAG-S 397

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A +VFD+M +++ V WT ++      G   ++   F  M+  G   ++ T   V+ A
Sbjct: 398 MKDARQVFDRMPKRDVVSWTALVGGYADCGQVVESFSTFKKMLQQGVEANKITYMCVLKA 457

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS       GK++H+  ++ G+  D+ V  +L+ MY KC   GSV+D+ +V + M   +V
Sbjct: 458 CSNPVALKWGKEIHAEVVKAGIFADLAVANALMSMYFKC---GSVEDAIRVSEGMSTRDV 514

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQV 410
           ++W  +I G  Q+ GR  EA++ F  M   ++ PN  TF +V+ AC   NL++     Q 
Sbjct: 515 VTWNTLIGGLAQN-GRGLEALQKFEVMKSEEMRPNATTFVNVMSACRVRNLVEEG-RRQF 572

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN 469
            +     G    +     ++ + AR+G + +A     ++ F+ +   +  ++ A   + N
Sbjct: 573 ASMRKDYGIVPTEKHYACMVDILARAGHLGEAEDVILTMPFKPSAAMWGALLAACRAHGN 632

Query: 470 ---SEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
               E+A E   ++E    GT  Y   S +  A+ +
Sbjct: 633 VEIGEQAAEQCLKLEPQNAGT--YVSLSFIYAAAGM 666



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 98/194 (50%), Gaps = 4/194 (2%)

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           ++L  +   G    +Y +  LL        +  G+Q+H  I++ G + N  I N L+ +Y
Sbjct: 30  DVLQYLHQKGSQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRFGMKPNVYIINTLLKLY 89

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
             C +V  A ++F +  +++V+SW  MI+G+A  G    A  +F  M  +G++P+  T++
Sbjct: 90  VHCGSVNEARRLFDKFSNKSVVSWNVMISGYAHRGLGQEAFNLFTLMQQEGLEPDKFTFV 149

Query: 595 AVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           ++LSACS    ++ G + H R M  E G+         ++ +  + GS+ +A     +M 
Sbjct: 150 SILSACSSPAALNWGREVHVRVM--EAGLANNATVGNALISMYAKCGSVRDARRVFDAMA 207

Query: 654 LSADVLVWRTFLGA 667
            S D + W T  GA
Sbjct: 208 -SRDEVSWTTLTGA 220


>gi|359483488|ref|XP_002273710.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 933

 Score =  630 bits (1624), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 316/782 (40%), Positives = 491/782 (62%), Gaps = 7/782 (0%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S +LK+C   ++  +GK VH ++  S  E +  + N+L+ +Y+KC +  ++ ++F  +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +R++VSW+++ S YV      +A+ +F EM+  G  PNE+  S+++ AC+   + + G
Sbjct: 219 -PERNVVSWNALFSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            II+G+L+K GY D D     AL+DM+ K   DL  A  VF+K+ + + V W  +I  C 
Sbjct: 278 KIIHGYLIKLGY-DWDPFSANALVDMYAKVG-DLADAISVFEKIKQPDIVSWNAVIAGCV 335

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                  A+ L   M  SG  P+ FTLS  + AC+ + L   G+QLHS  ++  +  D+ 
Sbjct: 336 LHEHHEQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLF 395

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V   LVDMY+KC +   ++D+R  F+ + + ++++W AII+GY Q    D EA+ LF +M
Sbjct: 396 VSVGLVDMYSKCDL---LEDARMAFNLLPEKDLIAWNAIISGYSQYW-EDMEALSLFVEM 451

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +  +  N  T +++LK+   L   +V  QV+  +VK G   D  V NSLI  Y +   +
Sbjct: 452 HKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHV 511

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           EDA + FE     +LVS+ +M+ AYA+    E+A +L  E++D  +    +  +SLL+  
Sbjct: 512 EDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 571

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +++ A  +G+Q+H  I+K GF  +    N+L++MY++C +++ A + F E+ +R ++SW+
Sbjct: 572 ANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWS 631

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G A+HG   +AL++F +ML +G+ PN IT ++VL AC+HAGL++E   +F SM + 
Sbjct: 632 AMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEEL 691

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            G     EHYACM+DLLGR+G + EA+E +  MP  A+  VW   LGA R+H D ELG+ 
Sbjct: 692 FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRR 751

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AAEM+   +P+    H+LL+N+YASAG WE VA +R+ M++  + KE G SWIE  +KV+
Sbjct: 752 AAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVY 811

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
            F VG+ SH ++ EIYA+LD+L+  + + GY+P     LH++E+ +K   L+ HSEK+AV
Sbjct: 812 TFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAV 871

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLI+T +  PIRV KNLRVC DCHTA KYI  +  REI++RD NRFHH KDG CSC D
Sbjct: 872 AFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGD 931

Query: 860 YW 861
           YW
Sbjct: 932 YW 933



 Score =  318 bits (816), Expect = 6e-84,   Method: Compositional matrix adjust.
 Identities = 208/694 (29%), Positives = 363/694 (52%), Gaps = 30/694 (4%)

Query: 17  SFKPSNPSRQNLPPSSSPPFIAQ-PTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNH 75
           SF+     R +LP   +P  I   P  S+      I +L D               KGN 
Sbjct: 8   SFQKPLHQRLHLPFKPAPKLIQTVPQFSQDPQTTAILNLID---------------KGNF 52

Query: 76  -PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
            P   +YS LL  C  +++   G  +H+ +T+S L  +  I N LI+LYSKC +   A K
Sbjct: 53  TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRNFGYARK 112

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +     ++ D+VSWS++IS Y   G    A+  F EM  LG   NE+ FS+V++ACS  +
Sbjct: 113 LVDE-SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++ IG  ++G ++  G F+ DV V   L+ M+ K    L+S  ++FD++ E+N V W  +
Sbjct: 172 DLRIGKQVHGVVVVSG-FEGDVFVANTLVVMYAKCDEFLDSK-RLFDEIPERNVVSWNAL 229

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
            +   Q+    +A+ LF +M+LSG  P+ F+LS +V+AC+ L   + GK +H + I+ G 
Sbjct: 230 FSCYVQIDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             D     +LVDMYAK    G + D+  VF+++   +++SW A+I G V      ++A++
Sbjct: 290 DWDPFSANALVDMYAKV---GDLADAISVFEKIKQPDIVSWNAVIAGCVLH-EHHEQALE 345

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           L   M +  + PN FT +S LKAC  +    +  Q+++  +K     D  V   L+ MY+
Sbjct: 346 LLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYS 405

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           +   +EDAR AF  L EK+L+++N ++  Y++     +A  L  E+   G+G +  T ++
Sbjct: 406 KCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 465

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   + +  +    Q+H   +KSGF S+  + N+LI  Y +C++VE A ++F+E    +
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 525

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           ++S+TSMIT +A++G    AL++F +M    +KP+     ++L+AC++     +G K   
Sbjct: 526 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG-KQLH 584

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
               ++G V  +     +V++  + GS+ +A      +     ++ W   +G    HG  
Sbjct: 585 VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQHGH- 642

Query: 675 ELGKHAAEMILEQDPQDPAA-HILLSNLYASAGH 707
             G+ A ++  +   +  +  HI L ++  +  H
Sbjct: 643 --GRQALQLFNQMLKEGVSPNHITLVSVLGACNH 674



 Score =  225 bits (573), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 162/583 (27%), Positives = 283/583 (48%), Gaps = 40/583 (6%)

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           F P    +S ++  C  T+++  G  I+  + K G  D D  +   LI+++ K   +   
Sbjct: 52  FTPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSD-DPSIRNHLINLYSKCR-NFGY 109

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A K+ D+ +E + V W+ +I+   Q G    A+  F +M L G   + FT S V+ ACS 
Sbjct: 110 ARKLVDESSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSI 169

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           ++    GKQ+H   + +G   DV V  +LV MYAKC       DS+++FD + + NV+SW
Sbjct: 170 VKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCD---EFLDSKRLFDEIPERNVVSW 226

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+ + YVQ      EAV LF +M+   + PN F+ +S++ AC  L DS+  + ++ + +
Sbjct: 227 NALFSCYVQI-DFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLI 285

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K G   D    N+L+ MYA+ G + DA   FE + + ++VS+N ++     + + E+A E
Sbjct: 286 KLGYDWDPFSANALVDMYAKVGDLADAISVFEKIKQPDIVSWNAVIAGCVLHEHHEQALE 345

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           LL +++ +G+  + +T +S L   + +G    G Q+H+ ++K   ES+  +   L+ MYS
Sbjct: 346 LLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGLVDMYS 405

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  +E A   F  + ++++I+W ++I+G++++     AL +F +M  +GI  N  T   
Sbjct: 406 KCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 465

Query: 596 VLSACS-----------HAGLISEGWKH----FRSMYDEHGIVQRMEH------------ 628
           +L + +           H   +  G+        S+ D +G    +E             
Sbjct: 466 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 525

Query: 629 ---YACMVDLLGRSGSLTEALEF---IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +  M+    + G   EAL+    ++ M L  D  V  + L AC      E GK    
Sbjct: 526 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQGKQLHV 585

Query: 683 MILEQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
            IL+     D  A   L N+YA  G  +        + ER ++
Sbjct: 586 HILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIV 628



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 137/440 (31%), Positives = 238/440 (54%), Gaps = 26/440 (5%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++A+  L  M + G  P++ T S  LK+C       LG+ +HS L +  +E +  +   L
Sbjct: 341 EQALELLGQMKRSGICPNIFTLSSALKACAGMGLKELGRQLHSSLMKMDMESDLFVSVGL 400

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + +YSKC  L +A   F  +  K D+++W+++IS Y    + ++A+ +FVEM + G   N
Sbjct: 401 VDMYSKCDLLEDARMAFNLLPEK-DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFN 459

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           +   S ++++ +  + V +   ++G  +K G F SD+ V  +LID + K S  +E A ++
Sbjct: 460 QTTLSTILKSTAGLQVVHVCRQVHGLSVKSG-FHSDIYVVNSLIDSYGKCS-HVEDAERI 517

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F++ T  + V +T MIT   Q G   +A++LFL+M      PDRF  S +++AC+ L  F
Sbjct: 518 FEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAF 577

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GKQLH   ++ G  LD+  G SLV+MYAKC   GS+DD+ + F  + +  ++SW+A+I
Sbjct: 578 EQGKQLHVHILKYGFVLDIFAGNSLVNMYAKC---GSIDDAGRAFSELTERGIVSWSAMI 634

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            G  Q  G  ++A++LF+ M++  V+PNH T  SVL AC +         + T A     
Sbjct: 635 GGLAQH-GHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH-------AGLVTEAKLYFE 686

Query: 420 ALDDCVG--------NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNS 470
           ++++  G          +I +  R+G++ +A +    + FE N   +  ++ A   + + 
Sbjct: 687 SMEELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDV 746

Query: 471 E---KAFELLHEIEDTGVGT 487
           E   +A E+L  +E    GT
Sbjct: 747 ELGRRAAEMLFILEPEKSGT 766


>gi|356555301|ref|XP_003545972.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 858

 Score =  628 bits (1619), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 317/815 (38%), Positives = 500/815 (61%), Gaps = 7/815 (0%)

Query: 47  SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           S+ L  ++ +G V++A+   + M   G   +  T+  +LK+C   R+ ++G+ VH +   
Sbjct: 51  SSLLSGYVQNGFVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVV 110

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           +  E +  + N+L+ +Y+KCG L+++ ++F  +  +R++VSW+++ S YV      +A+ 
Sbjct: 111 TGFESDGFVANTLVVMYAKCGLLDDSRRLFGGI-VERNVVSWNALFSCYVQSELCGEAVG 169

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F EM+  G  PNE+  S ++ AC+  +   +G  I+G +LK G  D D     AL+DM+
Sbjct: 170 LFKEMVRSGIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMG-LDLDQFSANALVDMY 228

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K   ++E A  VF  +   + V W  +I  C    C   A+ L  +M  SG  P+ FTL
Sbjct: 229 SKAG-EIEGAVAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTL 287

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           S  + AC+ +     G+QLHS  I+     D+     LVDMY+KC +   +DD+R+ +D 
Sbjct: 288 SSALKACAAMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEM---MDDARRAYDS 344

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   ++++W A+I+GY Q G    +AV LFS M    +  N  T ++VLK+  +L    V
Sbjct: 345 MPKKDIIAWNALISGYSQCGDH-LDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKV 403

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            +Q++T ++K G   D  V NSL+  Y +   +++A K FE    ++LV+Y +M+ AY++
Sbjct: 404 CKQIHTISIKSGIYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQ 463

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             + E+A +L  +++D  +    +  +SLL+  +++ A  +G+Q+H   IK GF  +   
Sbjct: 464 YGDGEEALKLYLQMQDADIKPDPFICSSLLNACANLSAYEQGKQLHVHAIKFGFMCDIFA 523

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            N+L++MY++C ++E A + F E+ +R ++SW++MI G+A+HG    AL +F +ML DG+
Sbjct: 524 SNSLVNMYAKCGSIEDADRAFSEIPNRGIVSWSAMIGGYAQHGHGKEALRLFNQMLRDGV 583

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
            PN IT ++VL AC+HAGL++EG ++F  M    GI    EHYACM+DLLGRSG L EA+
Sbjct: 584 PPNHITLVSVLCACNHAGLVNEGKQYFEKMEVMFGIKPTQEHYACMIDLLGRSGKLNEAV 643

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           E + S+P  AD  VW   LGA R+H + ELG+ AA+M+ + +P+    H+LL+N+YASAG
Sbjct: 644 ELVNSIPFEADGFVWGALLGAARIHKNIELGQKAAKMLFDLEPEKSGTHVLLANIYASAG 703

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE VA +RK MK+  + KE G SWIE  +KV+ F VG+ SH ++ EIYA+LDQL   + 
Sbjct: 704 MWENVAKVRKFMKDSKVKKEPGMSWIEIKDKVYTFIVGDRSHSRSDEIYAKLDQLGDLLS 763

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           + GY       +H +++ +K + L+ HSEK+AVAFGLI+T    PIRV KNLR+C DCHT
Sbjct: 764 KAGYSSIVEIDIHNVDKSEKEKLLYHHSEKLAVAFGLIATPPGGPIRVKKNLRICVDCHT 823

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K++  +  REI++RD NRFHH KDG CSC DYW
Sbjct: 824 FFKFVCKIVSREIIVRDINRFHHFKDGSCSCGDYW 858



 Score =  272 bits (695), Expect = 7e-70,   Method: Compositional matrix adjust.
 Identities = 173/610 (28%), Positives = 325/610 (53%), Gaps = 15/610 (2%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+ L +     +  + N L++LYSKC     A K+     ++ D+VSWSS++S YV  G
Sbjct: 3   LHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDE-SSELDVVSWSSLLSGYVQNG 61

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A+ +F EM  LG   NE+ F +V++ACS   ++ +G  ++G  +  G F+SD  V 
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTG-FESDGFVA 120

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
             L+ M+ K  + L+ + ++F  + E+N V W  + +   Q     +A+ LF +M+ SG 
Sbjct: 121 NTLVVMYAKCGL-LDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGI 179

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +P+ F++S +++AC+ L+    G+++H   ++ GL LD     +LVDMY+K    G ++ 
Sbjct: 180 MPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKA---GEIEG 236

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +  VF  +   +V+SW AII G V     D  A+ L  +M      PN FT +S LKAC 
Sbjct: 237 AVAVFQDIAHPDVVSWNAIIAGCVLHDCNDL-ALMLLDEMKGSGTRPNMFTLSSALKACA 295

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            +    +  Q+++  +K     D      L+ MY++   M+DAR+A++S+ +K+++++N 
Sbjct: 296 AMGFKELGRQLHSSLIKMDAHSDLFAAVGLVDMYSKCEMMDDARRAYDSMPKKDIIAWNA 355

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           ++  Y++  +   A  L  ++    +  +  T +++L   +S+ AI   +QIH   IKSG
Sbjct: 356 LISGYSQCGDHLDAVSLFSKMFSEDIDFNQTTLSTVLKSVASLQAIKVCKQIHTISIKSG 415

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             S+  + N+L+  Y +C +++ A ++F+E    +++++TSMIT ++++G    AL+++ 
Sbjct: 416 IYSDFYVINSLLDTYGKCNHIDEASKIFEERTWEDLVAYTSMITAYSQYGDGEEALKLYL 475

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M    IKP+     ++L+AC++     +G K       + G +  +     +V++  + 
Sbjct: 476 QMQDADIKPDPFICSSLLNACANLSAYEQG-KQLHVHAIKFGFMCDIFASNSLVNMYAKC 534

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD--PAAHIL 697
           GS+ +A      +P +  ++ W   +G    HG    GK A  +   Q  +D  P  HI 
Sbjct: 535 GSIEDADRAFSEIP-NRGIVSWSAMIGGYAQHGH---GKEALRL-FNQMLRDGVPPNHIT 589

Query: 698 LSNLYASAGH 707
           L ++  +  H
Sbjct: 590 LVSVLCACNH 599



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 194/372 (52%), Gaps = 10/372 (2%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           +LH+  I+ G + D  +   LV +Y+KC   G    +RK+ D   + +V+SW+++++GYV
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGY---ARKLVDESSELDVVSWSSLLSGYV 58

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           Q+G  + EA+ +F++M    V  N FTF SVLKAC    D N+  +V+  AV  G   D 
Sbjct: 59  QNGFVE-EALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDG 117

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N+L+ MYA+ G ++D+R+ F  + E+N+VS+N +   Y ++    +A  L  E+  +
Sbjct: 118 FVANTLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRS 177

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+  + ++ + +L+  + +     G +IH  ++K G + +    NAL+ MYS+   +E A
Sbjct: 178 GIMPNEFSISIILNACAGLQEGDLGRKIHGLMLKMGLDLDQFSANALVDMYSKAGEIEGA 237

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
             VF+++   +V+SW ++I G   H     AL +  +M   G +PN  T  + L AC+  
Sbjct: 238 VAVFQDIAHPDVVSWNAIIAGCVLHDCNDLALMLLDEMKGSGTRPNMFTLSSALKACAAM 297

Query: 604 GLISEGWKHFRSM--YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           G    G +   S+   D H     +     +VD+  +   + +A     SMP   D++ W
Sbjct: 298 GFKELGRQLHSSLIKMDAH---SDLFAAVGLVDMYSKCEMMDDARRAYDSMP-KKDIIAW 353

Query: 662 RTFLGACRVHGD 673
              +      GD
Sbjct: 354 NALISGYSQCGD 365



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 154/285 (54%), Gaps = 18/285 (6%)

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +++ H +K G + D  + N L+++Y++  R   ARK  +   E ++VS+++++  Y +N 
Sbjct: 2   ELHAHLIKFGFSRDPSLRNHLVTLYSKCRRFGYARKLVDESSELDVVSWSSLLSGYVQNG 61

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A  + +E+   GV  + +TF S+L   S    +  G ++H   + +GFES+  + N
Sbjct: 62  FVEEALLVFNEMCLLGVKCNEFTFPSVLKACSMKRDLNMGRKVHGMAVVTGFESDGFVAN 121

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            L+ MY++C  ++ + ++F  + +RNV+SW ++ + + +      A+ +F +M+  GI P
Sbjct: 122 TLVVMYAKCGLLDDSRRLFGGIVERNVVSWNALFSCYVQSELCGEAVGLFKEMVRSGIMP 181

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM----EHYA--CMVDLLGRSGSL 642
           N  +   +L+AC  AGL  EG    R +   HG++ +M    + ++   +VD+  ++G +
Sbjct: 182 NEFSISIILNAC--AGL-QEG-DLGRKI---HGLMLKMGLDLDQFSANALVDMYSKAGEI 234

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
             A+   + +    DV+ W   +  C +H   +L    A M+L++
Sbjct: 235 EGAVAVFQDIA-HPDVVSWNAIIAGCVLHDCNDL----ALMLLDE 274


>gi|359482115|ref|XP_003632713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Vitis vinifera]
          Length = 989

 Score =  626 bits (1614), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 308/807 (38%), Positives = 500/807 (61%), Gaps = 7/807 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +GR  +AI     M +    P    +S +L +C +   F LG+ +H  + +  L   + 
Sbjct: 190 QNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWGLSSETF 249

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L++LYS+ G+L  A +IF  M ++RD +S++S+IS    RG    A+ +F +M   
Sbjct: 250 VCNALVTLYSRWGNLIAAEQIFSKM-HRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD 308

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+    ++++ AC++      G  ++ +++K G   SD+ +  +L+D++VK   D+E
Sbjct: 309 CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMG-MSSDLIIEGSLLDLYVK-CFDIE 366

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           +A++ F     +N V W +M+    QLG   ++  +FL M + G +P+++T   ++  C+
Sbjct: 367 TAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMPNQYTYPSILRTCT 426

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L     G+Q+H+  I++G   +V V   L+DMYAK    G +D +R +  R+ + +V+S
Sbjct: 427 SLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAK---HGELDTARGILQRLREEDVVS 483

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA+I GY Q      EA+KLF +M    +  ++  F+S + AC  +   N  +Q++  +
Sbjct: 484 WTAMIAGYTQHD-LFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQS 542

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
              G + D  +GN+L+S+YAR GR +DA  AFE +  K+ +S+N ++  +A++ + E+A 
Sbjct: 543 YISGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEAL 602

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           ++  ++   GV  + +TF S +S  ++   I +G+QIHA +IK+G++S     N LI++Y
Sbjct: 603 QVFSQMNQAGVEANLFTFGSAVSATANTANIKQGKQIHAMMIKTGYDSETEASNVLITLY 662

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S+C ++E A + F EM ++NV+SW +MITG+++HG+ + A+ +F +M   G+ PN +T++
Sbjct: 663 SKCGSIEDAKREFFEMPEKNVVSWNAMITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFV 722

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            VLSACSH GL++EG  +FRSM  EHG+V + EHY C+VDLLGR+  L  A EFI  MP+
Sbjct: 723 GVLSACSHVGLVNEGLSYFRSMSKEHGLVPKPEHYVCVVDLLGRAALLCCAREFIEEMPI 782

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D ++WRT L AC VH + E+G+ AA  +LE +P+D A ++LLSN+YA +G W+Y    
Sbjct: 783 EPDAMIWRTLLSACTVHKNIEIGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRT 842

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R+ MK+R + KE G SWIE  N +H F VG+  HP   +IY  +D L  +  E GY+ D 
Sbjct: 843 RQMMKDRGVKKEPGRSWIEVKNSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDR 902

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
             +L+++E+EQK    + HSEK+AVAFGL+S + + PIRV KNLRVC DCH  IK++S +
Sbjct: 903 YNLLNDVEQEQKDPTAYIHSEKLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKI 962

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + R IV+RD+ RFHH + G CSC DYW
Sbjct: 963 SNRAIVVRDAYRFHHFEGGVCSCKDYW 989



 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 185/635 (29%), Positives = 343/635 (54%), Gaps = 11/635 (1%)

Query: 40  PTTSEPLSNRLIYHLNDGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIRSRN-FHLG 97
           P+++    N++I  L   ++   +  L  LM  +   PD  T++ +L++C   +  F + 
Sbjct: 72  PSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLRACSGGKAPFQVT 131

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           + +H+ +       + ++ N LI LYSK G ++ A  +F+ +  K D VSW +MIS    
Sbjct: 132 EQIHAKIIHHGFGSSPLVCNPLIDLYSKNGHVDLAKLVFERLFLK-DSVSWVAMISGLSQ 190

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G++ +AI +F +M +    P  Y FS+V+ AC+  E   +G  ++GF++K G   S+  
Sbjct: 191 NGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLHGFIVKWG-LSSETF 249

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V  AL+ ++ +   +L +A ++F KM  ++ + +  +I+   Q G    A++LF  M L 
Sbjct: 250 VCNALVTLYSRWG-NLIAAEQIFSKMHRRDRISYNSLISGLAQRGFSDRALQLFEKMQLD 308

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
              PD  T++ ++SAC+ +     GKQLHS+ I+ G++ D+ +  SL+D+Y KC     +
Sbjct: 309 CMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEGSLLDLYVKCF---DI 365

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           + + + F      NV+ W  ++  Y Q G    E+  +F  M    + PN +T+ S+L+ 
Sbjct: 366 ETAHEYFLTTETENVVLWNVMLVAYGQLGNL-SESYWIFLQMQIEGLMPNQYTYPSILRT 424

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L   ++ EQ++T  +K G   +  V + LI MYA+ G ++ AR   + L E+++VS+
Sbjct: 425 CTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGILQRLREEDVVSW 484

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+  Y ++    +A +L  E+E+ G+ +    F+S +S  + I A+ +G+QIHA+   
Sbjct: 485 TAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQALNQGQQIHAQSYI 544

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           SG+  +  I NAL+S+Y+RC   + A+  F++++ ++ ISW ++I+GFA+ G    AL++
Sbjct: 545 SGYSEDLSIGNALVSLYARCGRAQDAYLAFEKIDAKDNISWNALISGFAQSGHCEEALQV 604

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M   G++ N  T+ + +SA ++   I +G K   +M  + G     E    ++ L  
Sbjct: 605 FSQMNQAGVEANLFTFGSAVSATANTANIKQG-KQIHAMMIKTGYDSETEASNVLITLYS 663

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           + GS+ +A      MP   +V+ W   +     HG
Sbjct: 664 KCGSIEDAKREFFEMP-EKNVVSWNAMITGYSQHG 697



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 149/524 (28%), Positives = 264/524 (50%), Gaps = 18/524 (3%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M E G   N   +  +   C N+ ++     ++  + K G FD +  +G  LID+++  G
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSG-FDGEDVLGSRLIDIYLAHG 59

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            VD  +A K+FD +   N   W  +I+           + LF  MI     PD  T + V
Sbjct: 60  EVD--NAIKLFDDIPSSNVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASV 117

Query: 290 VSACSELEL-FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           + ACS  +  F   +Q+H+  I  G      V   L+D+Y+K   +G VD ++ VF+R+ 
Sbjct: 118 LRACSGGKAPFQVTEQIHAKIIHHGFGSSPLVCNPLIDLYSK---NGHVDLAKLVFERLF 174

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             + +SW A+I+G  Q+G R+ EA+ LF  M +  V P  + F+SVL AC  +    + E
Sbjct: 175 LKDSVSWVAMISGLSQNG-REDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGE 233

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++   VK G + +  V N+L+++Y+R G +  A + F  +  ++ +SYN+++   A+  
Sbjct: 234 QLHGFIVKWGLSSETFVCNALVTLYSRWGNLIAAEQIFSKMHRRDRISYNSLISGLAQRG 293

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
            S++A +L  +++   +     T ASLLS  +S+GA  KG+Q+H+ +IK G  S+  I  
Sbjct: 294 FSDRALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIEG 353

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           +L+ +Y +C ++E A + F   E  NV+ W  M+  + + G  + +  IF +M  +G+ P
Sbjct: 354 SLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLMP 413

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC--MVDLLGRSGSLTEAL 646
           N  TY ++L  C+  G +  G +   +   + G   +   Y C  ++D+  + G L  A 
Sbjct: 414 NQYTYPSILRTCTSLGALDLG-EQIHTQVIKSGF--QFNVYVCSVLIDMYAKHGELDTAR 470

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
             ++ +    DV+ W   +     H   +L   A ++  E + Q
Sbjct: 471 GILQRLR-EEDVVSWTAMIAGYTQH---DLFAEALKLFQEMENQ 510


>gi|328774759|gb|AEB39779.1| pentatricopeptide repeat protein 98 [Funaria hygrometrica]
          Length = 980

 Score =  615 bits (1587), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 315/805 (39%), Positives = 492/805 (61%), Gaps = 10/805 (1%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R ++A    + M Q G  PD  T+  +L +C  ++N   G  + SL+  +  + +  +  
Sbjct: 185 RYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNAGWDTDLFVGT 244

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +LI+++ KCG +++A K+F ++  +RD+++W+SMI+      +   A ++F  M E G  
Sbjct: 245 ALINMHIKCGGVDDALKVFNNL-PRRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQ 303

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
           P++  F ++++AC++ E +  G  ++  + + G  D+++ VG AL+ M+ K GS  +E A
Sbjct: 304 PDKVAFVSLLKACNHPEALEQGKRVHARMKEVG-LDTEIYVGTALLSMYTKCGS--MEDA 360

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF+ +  +N V WT MI    Q G   +A   F  MI SG  P+R T   ++ ACS  
Sbjct: 361 LEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRP 420

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+Q+H   I+ G   D  V  +L+ MYAKC   GS+ D+R VF+R+   NV++W 
Sbjct: 421 SALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKC---GSLMDARNVFERISKQNVVAWN 477

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+IT YVQ    D  AV  F  +++  + P+  TF S+L  C +     + + V +  ++
Sbjct: 478 AMITAYVQHEKYDN-AVATFQALLKEGIKPDSSTFTSILNVCKSPDALELGKWVQSLIIR 536

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   D  + N+L+SM+   G +  A   F  + E++LVS+NT++  + ++  ++ AF+ 
Sbjct: 537 AGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDY 596

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
              ++++GV     TF  LL+  +S  A+ +G ++HA I ++  + +  +   LISMY++
Sbjct: 597 FKMMQESGVKPDQITFTGLLNACASPEALTEGRRLHALITEAALDCDVVVGTGLISMYTK 656

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C +++ A  VF  +  +NV SWTSMITG+A+HG    ALE+F +M  +G+KP+ IT++  
Sbjct: 657 CGSIDDAHLVFHNLPKKNVYSWTSMITGYAQHGRGKEALELFCQMQQEGVKPDWITFVGA 716

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           LSAC+HAGLI EG  HF SM D   I  RMEHY CMVDL GR+G L EA+EFI  M +  
Sbjct: 717 LSACAHAGLIKEGLHHFESMKD-FNIEPRMEHYGCMVDLFGRAGLLHEAVEFINKMQVKP 775

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  +W   LGAC+VH D EL +  A+  LE DP D   +++LSN+YA+AG W+ V  +RK
Sbjct: 776 DSRLWGALLGACQVHLDVELAEKVAQKKLELDPNDDGVYVILSNIYAAAGMWKEVTKMRK 835

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M +R ++K+ G SWIE D +VH F   + +HP+  EI+AEL +L +++K+ GY+PDT +
Sbjct: 836 VMLDRGVVKKPGQSWIEVDGRVHIFCSDDKTHPQIEEIHAELGRLHMEMKKLGYVPDTRY 895

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH++E+ +K   L  HSE++A+A+GL+ T    PI + KNLRVCGDCHTA K IS +T 
Sbjct: 896 VLHDVEDSEKEHALCHHSERLAIAYGLLKTPPLTPIVISKNLRVCGDCHTATKLISKITK 955

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R+I+ RDSNRFHH KDG CSC D+W
Sbjct: 956 RQIIARDSNRFHHFKDGVCSCGDFW 980



 Score =  357 bits (916), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 204/629 (32%), Positives = 350/629 (55%), Gaps = 16/629 (2%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TYS LL+ CI+ +N   G+ +H+ +  SK++P+  + N LIS+Y+KCG+ N A +IF  M
Sbjct: 106 TYSSLLQLCIKHKNLGDGERIHNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEM 165

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            +K D+ SW+ ++  YV   +  +A  +  +M++ G  P++Y F  ++ AC++ +NV  G
Sbjct: 166 PDK-DVYSWNLLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKG 224

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
             ++  +L  G+ D+D+ VG ALI+M +K G VD   A KVF+ +  ++ + WT MIT  
Sbjct: 225 GELFSLILNAGW-DTDLFVGTALINMHIKCGGVD--DALKVFNNLPRRDLITWTSMITGL 281

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            +    + A  LF  M   G  PD+     ++ AC+  E    GK++H+     GL  ++
Sbjct: 282 ARHRQFKQACNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEI 341

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG +L+ MY KC   GS++D+ +VF+ +   NV+SWTA+I G+ Q  GR +EA   F+ 
Sbjct: 342 YVGTALLSMYTKC---GSMEDALEVFNLVKGRNVVSWTAMIAGFAQH-GRMEEAFLFFNK 397

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           MI+  + PN  TF S+L AC          Q++   +K G   DD V  +L+SMYA+ G 
Sbjct: 398 MIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGS 457

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           + DAR  FE + ++N+V++N M+ AY ++   + A      +   G+   + TF S+L+ 
Sbjct: 458 LMDARNVFERISKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNV 517

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
             S  A+  G+ + + II++GFES+  I NAL+SM+  C ++ +A  +F +M +R+++SW
Sbjct: 518 CKSPDALELGKWVQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMPERDLVSW 577

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
            ++I GF +HG    A + F  M   G+KP+ IT+  +L+AC+    ++EG +   ++  
Sbjct: 578 NTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASPEALTEG-RRLHALIT 636

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           E  +   +     ++ +  + GS+ +A     ++P   +V  W + +     HG    GK
Sbjct: 637 EAALDCDVVVGTGLISMYTKCGSIDDAHLVFHNLP-KKNVYSWTSMITGYAQHGR---GK 692

Query: 679 HAAEMI--LEQDPQDPAAHILLSNLYASA 705
            A E+   ++Q+   P     +  L A A
Sbjct: 693 EALELFCQMQQEGVKPDWITFVGALSACA 721



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 154/554 (27%), Positives = 289/554 (52%), Gaps = 12/554 (2%)

Query: 137 KSMGNKRDIVSWSSMISSYVNR----GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
           K  GN+   +  +   ++++NR    G+  +A+ + + +       +   +S++++ C  
Sbjct: 57  KGQGNEFVDIKNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIK 116

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
            +N+  G  I+  + K      D+ +   LI M+ K   +  SA ++FD+M +K+   W 
Sbjct: 117 HKNLGDGERIHNHI-KFSKIQPDIFMWNMLISMYAKCG-NTNSAKQIFDEMPDKDVYSWN 174

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
           L++    Q     +A RL   M+  G  PD++T   +++AC++ +    G +L S  +  
Sbjct: 175 LLLGGYVQHRRYEEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELFSLILNA 234

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G   D+ VG +L++M+ KC   G VDD+ KVF+ +   ++++WT++ITG  +   + K+A
Sbjct: 235 GWDTDLFVGTALINMHIKC---GGVDDALKVFNNLPRRDLITWTSMITGLARH-RQFKQA 290

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
             LF  M +  V P+   F S+LKAC +       ++V+    + G   +  VG +L+SM
Sbjct: 291 CNLFQVMEEEGVQPDKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTEIYVGTALLSM 350

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y + G MEDA + F  +  +N+VS+  M+  +A++   E+AF   +++ ++G+  +  TF
Sbjct: 351 YTKCGSMEDALEVFNLVKGRNVVSWTAMIAGFAQHGRMEEAFLFFNKMIESGIEPNRVTF 410

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S+L   S   A+ +G QIH RIIK+G+ ++  +  AL+SMY++C ++  A  VF+ +  
Sbjct: 411 MSILGACSRPSALKQGRQIHDRIIKAGYITDDRVRTALLSMYAKCGSLMDARNVFERISK 470

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           +NV++W +MIT + +H     A+  F  +L +GIKP+  T+ ++L+ C     +  G K 
Sbjct: 471 QNVVAWNAMITAYVQHEKYDNAVATFQALLKEGIKPDSSTFTSILNVCKSPDALELG-KW 529

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            +S+    G    +     +V +    G L  A+     MP   D++ W T +     HG
Sbjct: 530 VQSLIIRAGFESDLHIRNALVSMFVNCGDLMSAMNLFNDMP-ERDLVSWNTIIAGFVQHG 588

Query: 673 DTELGKHAAEMILE 686
           + +      +M+ E
Sbjct: 589 ENQFAFDYFKMMQE 602



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 251/504 (49%), Gaps = 50/504 (9%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR+++A    + M + G  P+  T+  +L +C R      G+ +H  + ++    +  + 
Sbjct: 386 GRMEEAFLFFNKMIESGIEPNRVTFMSILGACSRPSALKQGRQIHDRIIKAGYITDDRVR 445

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+S+Y+KCG L +A  +F+ + +K+++V+W++MI++YV   K  +A+  F  +L+ G 
Sbjct: 446 TALLSMYAKCGSLMDARNVFERI-SKQNVVAWNAMITAYVQHEKYDNAVATFQALLKEGI 504

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+   F++++  C + + + +G  +   +++ G F+SD+ +  AL+ MFV    DL SA
Sbjct: 505 KPDSSTFTSILNVCKSPDALELGKWVQSLIIRAG-FESDLHIRNALVSMFVNCG-DLMSA 562

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +F+ M E++ V W  +I    Q G  + A   F  M  SG  PD+ T +G+++AC+  
Sbjct: 563 MNLFNDMPERDLVSWNTIIAGFVQHGENQFAFDYFKMMQESGVKPDQITFTGLLNACASP 622

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E  T G++LH+      L  DV VG  L+ MY KC   GS+DD+  VF  +   NV SWT
Sbjct: 623 EALTEGRRLHALITEAALDCDVVVGTGLISMYTKC---GSIDDAHLVFHNLPKKNVYSWT 679

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++ITGY Q  GR KEA++LF  M Q  V P+  TF   L AC                  
Sbjct: 680 SMITGYAQH-GRGKEALELFCQMQQEGVKPDWITFVGALSAC------------------ 720

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESL----FEKNLVSYNTMVDAYAKNLNSEK 472
                            A +G +++    FES+     E  +  Y  MVD + +     +
Sbjct: 721 -----------------AHAGLIKEGLHHFESMKDFNIEPRMEHYGCMVDLFGRAGLLHE 763

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A E +++++   V   +  + +LL        +   E++  + ++    ++  +Y  L +
Sbjct: 764 AVEFINKMQ---VKPDSRLWGALLGACQVHLDVELAEKVAQKKLELD-PNDDGVYVILSN 819

Query: 533 MYSRCANVEAAFQVFKEMEDRNVI 556
           +Y+     +   ++ K M DR V+
Sbjct: 820 IYAAAGMWKEVTKMRKVMLDRGVV 843



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 70/276 (25%), Positives = 133/276 (48%), Gaps = 3/276 (1%)

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           KN    N  ++  +K     +A  +L  ++   +     T++SLL        +G GE+I
Sbjct: 67  KNTQRANAFLNRLSKAGQLSEAMLVLLSVDSPHIQIHRQTYSSLLQLCIKHKNLGDGERI 126

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H  I  S  + +  ++N LISMY++C N  +A Q+F EM D++V SW  ++ G+ +H   
Sbjct: 127 HNHIKFSKIQPDIFMWNMLISMYAKCGNTNSAKQIFDEMPDKDVYSWNLLLGGYVQHRRY 186

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A  +  +M+ DG+KP+  T++ +L+AC+ A  + +G + F S+    G    +     
Sbjct: 187 EEAFRLHEQMVQDGVKPDKYTFVYMLNACADAKNVDKGGELF-SLILNAGWDTDLFVGTA 245

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ- 690
           ++++  + G + +AL+   ++P   D++ W + +     H   +   +  +++ E+  Q 
Sbjct: 246 LINMHIKCGGVDDALKVFNNLP-RRDLITWTSMITGLARHRQFKQACNLFQVMEEEGVQP 304

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
           D  A + L          E    +  RMKE  L  E
Sbjct: 305 DKVAFVSLLKACNHPEALEQGKRVHARMKEVGLDTE 340


>gi|125570322|gb|EAZ11837.1| hypothetical protein OsJ_01713 [Oryza sativa Japonica Group]
          Length = 877

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/808 (39%), Positives = 486/808 (60%), Gaps = 11/808 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G  + AI     M  +G   +     ++LK    +R   LG  VH++   +    +  
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVF 136

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+++Y   G +++A ++F    ++R+ VSW+ ++S+YV   +  DAI +F EM+  
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P E+ FS V+ AC+ + N+  G  ++  +++ GY D DV    AL+DM++K G VD+
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY-DKDVFTANALVDMYMKMGRVDI 255

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            S   +F+KM + + V W  +I+ C   G    AI L L M  SG +P+ FTLS ++ AC
Sbjct: 256 ASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S    F  G+Q+H + I+     D  +G  LVDMYAK   +  +DD+RKVFD M   +++
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK---NHFLDDARKVFDWMFHRDLI 370

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
              A+I+G    GGR  EA+ LF ++ +  +  N  T A+VLK+  +L  ++   QV+  
Sbjct: 371 LCNALISG-CSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           AVK G   D  V N LI  Y +   + DA + FE     ++++  +M+ A ++  + E A
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGA 489

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +L  E+   G+    +  +SLL+  +S+ A  +G+Q+HA +IK  F S+    NAL+  
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C ++E A   F  + +R V+SW++MI G A+HG   RALE+F +M+ +GI PN IT 
Sbjct: 550 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 609

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            +VL AC+HAGL+ E  ++F SM +  GI +  EHY+CM+DLLGR+G L +A+E + SMP
Sbjct: 610 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
             A+  +W   LGA RVH D ELGK AAE +   +P+    H+LL+N YASAG W  VA 
Sbjct: 670 FQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAK 729

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +RK MK+ N+ KE   SWIE  +KVH F VG+ SHP T EIYA+L +L   + + G++P+
Sbjct: 730 VRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPN 789

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +  LH+L+  +K   L  HSE++AVAF L+ST    PIRV KNLR+C DCH A K+IS 
Sbjct: 790 VDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISK 849

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +  REI++RD NRFHH +DG CSC DYW
Sbjct: 850 IVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 181/609 (29%), Positives = 308/609 (50%), Gaps = 20/609 (3%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LIS YSKC     A + F  + +    VSWSS++++Y N G    AI  F  M   G 
Sbjct: 41  NHLISFYSKCRRPCCARRFFDEIPDPCH-VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGV 99

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
           C NE+    V++   +     +G  ++   +  G F SDV V  AL+ M+  G   ++ A
Sbjct: 100 CCNEFALPVVLKCVPDAR---LGAQVHAMAMATG-FGSDVFVANALVAMY-GGFGFMDDA 154

Query: 237 YKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
            +VF++  +E+N V W  +++   +     DAI++F +M+ SG  P  F  S VV+AC+ 
Sbjct: 155 RRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 214

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                +G+Q+H+  +R G   DV    +LVDMY K    G VD +  +F++M D +V+SW
Sbjct: 215 SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM---GRVDIASVIFEKMPDSDVVSW 271

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I+G V + G D  A++L   M    + PN FT +S+LKAC      ++  Q++   +
Sbjct: 272 NALISGCVLN-GHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K     DD +G  L+ MYA++  ++DARK F+ +F ++L+  N ++   +     ++A  
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L +E+   G+G +  T A++L   +S+ A     Q+HA  +K GF  +  + N LI  Y 
Sbjct: 391 LFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYW 450

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C+ +  A +VF+E    ++I+ TSMIT  ++      A+++F +ML  G++P+     +
Sbjct: 451 KCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L+AC+      +G K   +   +   +        +V    + GS+ +A     S+P  
Sbjct: 511 LLNACASLSAYEQG-KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-E 568

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQ-DPQDPAAHILLSNLYASAGHWEYVANI 714
             V+ W   +G    HG    GK A E+     D      HI ++++  +  H   V   
Sbjct: 569 RGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625

Query: 715 RK---RMKE 720
           ++    MKE
Sbjct: 626 KRYFNSMKE 634



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 61/118 (51%), Gaps = 2/118 (1%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           SA T +  L+  ++  A+  G  +HA ++KSG  S     N LIS YS+C     A + F
Sbjct: 3   SAGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRFF 60

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
            E+ D   +SW+S++T ++ +G    A++ F+ M A+G+  N      VL     A L
Sbjct: 61  DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL 118


>gi|297719939|ref|NP_001172331.1| Os01g0355000 [Oryza sativa Japonica Group]
 gi|53791352|dbj|BAD52598.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|215768699|dbj|BAH00928.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|255673214|dbj|BAH91061.1| Os01g0355000 [Oryza sativa Japonica Group]
          Length = 877

 Score =  614 bits (1584), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 322/808 (39%), Positives = 486/808 (60%), Gaps = 11/808 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G  + AI     M  +G   +     ++LK    +R   LG  VH++   +    +  
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAR---LGAQVHAMAMATGFGSDVF 136

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+++Y   G +++A ++F    ++R+ VSW+ ++S+YV   +  DAI +F EM+  
Sbjct: 137 VANALVAMYGGFGFMDDARRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P E+ FS V+ AC+ + N+  G  ++  +++ GY D DV    AL+DM++K G VD+
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIEAGRQVHAMVVRMGY-DKDVFTANALVDMYMKMGRVDI 255

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            S   +F+KM + + V W  +I+ C   G    AI L L M  SG +P+ FTLS ++ AC
Sbjct: 256 ASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKYSGLVPNVFTLSSILKAC 313

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S    F  G+Q+H + I+     D  +G  LVDMYAK   +  +DD+RKVFD M   +++
Sbjct: 314 SGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK---NHFLDDARKVFDWMFHRDLI 370

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
              A+I+G    GGR  EA+ LF ++ +  +  N  T A+VLK+  +L  ++   QV+  
Sbjct: 371 LCNALISG-CSHGGRHDEALSLFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHAL 429

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           AVK G   D  V N LI  Y +   + DA + FE     ++++  +M+ A ++  + E A
Sbjct: 430 AVKIGFIFDAHVVNGLIDSYWKCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGA 489

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +L  E+   G+    +  +SLL+  +S+ A  +G+Q+HA +IK  F S+    NAL+  
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C ++E A   F  + +R V+SW++MI G A+HG   RALE+F +M+ +GI PN IT 
Sbjct: 550 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 609

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            +VL AC+HAGL+ E  ++F SM +  GI +  EHY+CM+DLLGR+G L +A+E + SMP
Sbjct: 610 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
             A+  +W   LGA RVH D ELGK AAE +   +P+    H+LL+N YASAG W  VA 
Sbjct: 670 FQANASIWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASAGMWNEVAK 729

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +RK MK+ N+ KE   SWIE  +KVH F VG+ SHP T EIYA+L +L   + + G++P+
Sbjct: 730 VRKLMKDSNIKKEPAMSWIEVKDKVHTFIVGDKSHPMTKEIYAKLVELGDLMSKAGFVPN 789

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +  LH+L+  +K   L  HSE++AVAF L+ST    PIRV KNLR+C DCH A K+IS 
Sbjct: 790 VDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHVAFKFISK 849

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +  REI++RD NRFHH +DG CSC DYW
Sbjct: 850 IVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 181/609 (29%), Positives = 309/609 (50%), Gaps = 20/609 (3%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LIS YSKC     A ++F  + +    VSWSS++++Y N G    AI  F  M   G 
Sbjct: 41  NHLISFYSKCRRPCCARRVFDEIPDPCH-VSWSSLVTAYSNNGLPRSAIQAFHGMRAEGV 99

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
           C NE+    V++   +     +G  ++   +  G F SDV V  AL+ M+  G   ++ A
Sbjct: 100 CCNEFALPVVLKCVPDAR---LGAQVHAMAMATG-FGSDVFVANALVAMY-GGFGFMDDA 154

Query: 237 YKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
            +VF++  +E+N V W  +++   +     DAI++F +M+ SG  P  F  S VV+AC+ 
Sbjct: 155 RRVFNEADSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTG 214

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                +G+Q+H+  +R G   DV    +LVDMY K    G VD +  +F++M D +V+SW
Sbjct: 215 SRNIEAGRQVHAMVVRMGYDKDVFTANALVDMYMKM---GRVDIASVIFEKMPDSDVVSW 271

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I+G V + G D  A++L   M    + PN FT +S+LKAC      ++  Q++   +
Sbjct: 272 NALISGCVLN-GHDHRAIELLLQMKYSGLVPNVFTLSSILKACSGAGAFDLGRQIHGFMI 330

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K     DD +G  L+ MYA++  ++DARK F+ +F ++L+  N ++   +     ++A  
Sbjct: 331 KANADSDDYIGVGLVDMYAKNHFLDDARKVFDWMFHRDLILCNALISGCSHGGRHDEALS 390

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L +E+   G+G +  T A++L   +S+ A     Q+HA  +K GF  +  + N LI  Y 
Sbjct: 391 LFYELRKEGLGVNRTTLAAVLKSTASLEAASTTRQVHALAVKIGFIFDAHVVNGLIDSYW 450

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C+ +  A +VF+E    ++I+ TSMIT  ++      A+++F +ML  G++P+     +
Sbjct: 451 KCSCLSDANRVFEECSSGDIIACTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSS 510

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L+AC+      +G K   +   +   +        +V    + GS+ +A     S+P  
Sbjct: 511 LLNACASLSAYEQG-KQVHAHLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLP-E 568

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQ-DPQDPAAHILLSNLYASAGHWEYVANI 714
             V+ W   +G    HG    GK A E+     D      HI ++++  +  H   V   
Sbjct: 569 RGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEA 625

Query: 715 RK---RMKE 720
           ++    MKE
Sbjct: 626 KRYFNSMKE 634



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 62/118 (52%), Gaps = 2/118 (1%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           SA T +  L+  ++  A+  G  +HA ++KSG  S     N LIS YS+C     A +VF
Sbjct: 3   SAGTISQQLTRYAAAQALLPGAHLHASLLKSG--SLASFRNHLISFYSKCRRPCCARRVF 60

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
            E+ D   +SW+S++T ++ +G    A++ F+ M A+G+  N      VL     A L
Sbjct: 61  DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDARL 118


>gi|328774751|gb|AEB39775.1| pentatricopeptide repeat protein 71 [Funaria hygrometrica]
          Length = 837

 Score =  613 bits (1580), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 312/797 (39%), Positives = 489/797 (61%), Gaps = 7/797 (0%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            L  + +  NH D  TY  L + C+  R+  LGK V   + +S  + N   LN+LI L+S
Sbjct: 48  VLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIKLHS 107

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
            CG++ EA + F S+ NK  +V+W+++I+ Y   G   +A  +F +M++    P+   F 
Sbjct: 108 ICGNMLEARQTFDSVENK-TVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIITFL 166

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            V+ ACS+   + +G   +  ++K G F SD  +G AL+ M+VKG   ++ A +VFD + 
Sbjct: 167 IVLDACSSPAGLKLGKEFHAQVIKVG-FVSDFRIGTALVSMYVKGG-SMDGARQVFDGLY 224

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +++   + +MI    + G    A +LF  M   GF P+R +   ++  CS  E    GK 
Sbjct: 225 KRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKA 284

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  + TGL  DV V  +L+ MY  C   GS++ +R+VFD+M   +V+SWT +I GY +
Sbjct: 285 VHAQCMNTGLVDDVRVATALIRMYMGC---GSIEGARRVFDKMKVRDVVSWTVMIRGYAE 341

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +   + +A  LF+ M +  + P+  T+  ++ AC +  D ++A ++++  V+ G   D  
Sbjct: 342 NSNIE-DAFGLFATMQEEGIQPDRITYIHIINACASSADLSLAREIHSQVVRAGFGTDLL 400

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V  +L+ MYA+ G ++DAR+ F+++  +++VS++ M+ AY +N   E+AFE  H ++   
Sbjct: 401 VDTALVHMYAKCGAIKDARQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNN 460

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V     T+ +LL+    +GA+  G +I+ + IK+   S+  + NALI+M  +  ++E A 
Sbjct: 461 VEPDVVTYINLLNACGHLGALDLGMEIYTQAIKADLVSHIPVGNALINMNVKHGSIERAR 520

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            +F+ M  R+V++W  MI G++ HG A  AL++F +ML +  +PN +T++ VLSACS AG
Sbjct: 521 YIFENMVQRDVVTWNVMIGGYSLHGNAREALDLFDRMLKERFRPNSVTFVGVLSACSRAG 580

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            + EG + F  + D  GIV  ME Y CMVDLLGR+G L EA   I  MPL  +  +W T 
Sbjct: 581 FVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELDEAELLINRMPLKPNSSIWSTL 640

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           L ACR++G+ ++ + AAE  L  +P D A ++ LS++YA+AG WE VA +RK M+ R + 
Sbjct: 641 LAACRIYGNLDVAERAAERCLMSEPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGVR 700

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           KE GC+WIE + K+H F V + SHP+  EIYAEL +L   IK  GY+P T  VLH + E+
Sbjct: 701 KEQGCTWIEVEGKLHTFVVEDRSHPQAGEIYAELARLMTAIKREGYIPVTQNVLHNVGEQ 760

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           +K + +  HSEK+A+A+G++S     PIR+FKNLRVCGDCH+A K+IS VTGREI+ RD+
Sbjct: 761 EKEEAISYHSEKLAIAYGVLSLPSGAPIRIFKNLRVCGDCHSASKFISKVTGREIIARDA 820

Query: 845 NRFHHIKDGKCSCNDYW 861
           +RFHH K+G CSC DYW
Sbjct: 821 SRFHHFKNGVCSCGDYW 837



 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 156/525 (29%), Positives = 272/525 (51%), Gaps = 12/525 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G V++A      M  +   P + T+ ++L +C       LGK  H+ + +     +  I 
Sbjct: 141 GHVKEAFALFRQMVDEAMEPSIITFLIVLDACSSPAGLKLGKEFHAQVIKVGFVSDFRIG 200

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+S+Y K G ++ A ++F  +  KRD+ +++ MI  Y   G    A  +F  M + GF
Sbjct: 201 TALVSMYVKGGSMDGARQVFDGL-YKRDVSTFNVMIGGYAKSGDGEKAFQLFYRMQQEGF 259

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F +++  CS  E +A G  ++   +  G  D DV V  ALI M++ G   +E A
Sbjct: 260 KPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVD-DVRVATALIRMYM-GCGSIEGA 317

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VFDKM  ++ V WT+MI    +     DA  LF  M   G  PDR T   +++AC+  
Sbjct: 318 RRVFDKMKVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGIQPDRITYIHIINACASS 377

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
              +  +++HS  +R G   D+ V  +LV MYAKC   G++ D+R+VFD M   +V+SW+
Sbjct: 378 ADLSLAREIHSQVVRAGFGTDLLVDTALVHMYAKC---GAIKDARQVFDAMSRRDVVSWS 434

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I  YV++G   +EA + F  M +  V P+  T+ ++L ACG+L   ++  ++YT A+K
Sbjct: 435 AMIGAYVENGC-GEEAFETFHLMKRNNVEPDVVTYINLLNACGHLGALDLGMEIYTQAIK 493

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                   VGN+LI+M  + G +E AR  FE++ ++++V++N M+  Y+ + N+ +A +L
Sbjct: 494 ADLVSHIPVGNALINMNVKHGSIERARYIFENMVQRDVVTWNVMIGGYSLHGNAREALDL 553

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYS 535
              +       ++ TF  +LS  S  G + +G +  + ++   G      +Y  ++ +  
Sbjct: 554 FDRMLKERFRPNSVTFVGVLSACSRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLG 613

Query: 536 RCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG---FAARALE 576
           R   ++ A  +   M  + N   W++++     +G    A RA E
Sbjct: 614 RAGELDEAELLINRMPLKPNSSIWSTLLAACRIYGNLDVAERAAE 658



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 135/504 (26%), Positives = 233/504 (46%), Gaps = 51/504 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  +KA      M Q+G  P+  ++  +L  C        GK VH+    + L  +  + 
Sbjct: 242 GDGEKAFQLFYRMQQEGFKPNRISFLSILDGCSTPEALAWGKAVHAQCMNTGLVDDVRVA 301

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +LI +Y  CG +  A ++F  M   RD+VSW+ MI  Y       DA  +F  M E G 
Sbjct: 302 TALIRMYMGCGSIEGARRVFDKM-KVRDVVSWTVMIRGYAENSNIEDAFGLFATMQEEGI 360

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+   +  +I AC+++ ++++   I+  +++ G F +D+ V  AL+ M+ K    ++ A
Sbjct: 361 QPDRITYIHIINACASSADLSLAREIHSQVVRAG-FGTDLLVDTALVHMYAKCGA-IKDA 418

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VFD M+ ++ V W+ MI    + GC  +A   F  M  +   PD  T   +++AC  L
Sbjct: 419 RQVFDAMSRRDVVSWSAMIGAYVENGCGEEAFETFHLMKRNNVEPDVVTYINLLNACGHL 478

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G ++++ AI+  L   + VG +L++M  K    GS++ +R +F+ M+  +V++W 
Sbjct: 479 GALDLGMEIYTQAIKADLVSHIPVGNALINMNVK---HGSIERARYIFENMVQRDVVTWN 535

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I GY    G  +EA+ LF  M++ +  PN  TF  VL AC                  
Sbjct: 536 VMIGGYSLH-GNAREALDLFDRMLKERFRPNSVTFVGVLSAC------------------ 576

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVS----YNTMVDAYAKNLNSE 471
                            +R+G +E+ R+ F  L + + +V     Y  MVD   +    +
Sbjct: 577 -----------------SRAGFVEEGRRFFSYLLDGRGIVPTMELYGCMVDLLGRAGELD 619

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A ELL  I    +  ++  +++LL+     G +   E+   R + S    +  +Y  L 
Sbjct: 620 EA-ELL--INRMPLKPNSSIWSTLLAACRIYGNLDVAERAAERCLMSE-PYDGAVYVQLS 675

Query: 532 SMYSRCANVEAAFQVFKEMEDRNV 555
            MY+     E   +V K ME R V
Sbjct: 676 HMYAAAGMWENVAKVRKVMESRGV 699



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 2/203 (0%)

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++LH + +      + T+  L      +   G G+Q+   II+SG + N    N LI 
Sbjct: 45  ANDVLHRLGEGSNHIDSRTYVKLFQRCMMLRDAGLGKQVRDHIIQSGRQLNIYELNTLIK 104

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           ++S C N+  A Q F  +E++ V++W ++I G+A+ G    A  +F +M+ + ++P+ IT
Sbjct: 105 LHSICGNMLEARQTFDSVENKTVVTWNAIIAGYAQLGHVKEAFALFRQMVDEAMEPSIIT 164

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VL ACS    +  G K F +   + G V        +V +  + GS+  A +    +
Sbjct: 165 FLIVLDACSSPAGLKLG-KEFHAQVIKVGFVSDFRIGTALVSMYVKGGSMDGARQVFDGL 223

Query: 653 PLSADVLVWRTFLGACRVHGDTE 675
               DV  +   +G     GD E
Sbjct: 224 -YKRDVSTFNVMIGGYAKSGDGE 245


>gi|168045266|ref|XP_001775099.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673550|gb|EDQ60071.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 804

 Score =  612 bits (1577), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 311/797 (39%), Positives = 489/797 (61%), Gaps = 9/797 (1%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           L  + +KG   D   Y  LL+SC+++++  +GK VH  + R  ++PN  I N+L+ LY+ 
Sbjct: 16  LQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLYAH 75

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG +NEA ++F    NK  +VSW+ MIS Y +RG   +A ++F  M +    P+++ F +
Sbjct: 76  CGSVNEARQLFDKFSNK-SVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFVS 134

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           ++ ACS+   +  G  I+  +++ G   +D  VG ALI M+ K GSV    A +VFD M 
Sbjct: 135 ILSACSSPAVLNWGREIHVRVMEAG-LANDTTVGNALISMYAKCGSV--RDARRVFDAMA 191

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++ V WT +     + G   ++++ +  M+     P R T   V+SAC  L     GKQ
Sbjct: 192 SRDEVSWTTLTGAYAESGYGEESLKTYHAMLQERVRPSRITYMNVLSACGSLAALEKGKQ 251

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  + +    DV V  +L  MY KC   G+  D+R+VF+ +   +V++W  +I G+V 
Sbjct: 252 IHAHIVESEYHSDVRVSTALTKMYMKC---GAFKDAREVFECLSYRDVIAWNTMIRGFVD 308

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           SG + +EA   F  M++  VAP+  T+ +VL AC         ++++  A K G   D  
Sbjct: 309 SG-QLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDVR 367

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
            GN+LI+MY+++G M+DAR+ F+ + ++++VS+ T++  YA      ++F    ++   G
Sbjct: 368 FGNALINMYSKAGSMKDARQVFDRMPKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQQG 427

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V  +  T+  +L   S+  A+  G++IHA ++K+G  ++  + NAL+SMY +C +VE A 
Sbjct: 428 VKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLLADLAVTNALMSMYFKCGSVEDAI 487

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           +VF+ M  R+V++W ++I G  ++G    AL+ +  M ++G++PN  T++ VLSAC    
Sbjct: 488 RVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSACRVCN 547

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+ EG + F  M  ++GIV   +HYACMVD+L R+G L EA + I ++PL     +W   
Sbjct: 548 LVEEGRRQFAFMSKDYGIVPTEKHYACMVDILARAGHLREAEDVILTIPLKPSAAMWGAL 607

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           L ACR+H + E+G+ AAE  L+ +PQ+   ++ LS +YA+AG W  VA +RK MKER + 
Sbjct: 608 LAACRIHCNVEIGERAAEHCLKLEPQNAGLYVSLSAIYAAAGMWRDVAKLRKFMKERGVK 667

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           KE G SWIE   +VH F   + SHP+T EIYAEL+ L  ++K  GY+PDT FV+H+L++E
Sbjct: 668 KEPGRSWIEIAGEVHSFVARDQSHPRTQEIYAELETLKKQMKSLGYVPDTRFVMHDLDDE 727

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
            K + +  HSEK+A+A+GLIST    PIR+ KNLRVC DCHTA K+IS +T REI+ RD+
Sbjct: 728 GKERAVCHHSEKLAIAYGLISTPPGTPIRISKNLRVCTDCHTATKFISKITKREIIARDA 787

Query: 845 NRFHHIKDGKCSCNDYW 861
           +RFHH K+G+CSC DYW
Sbjct: 788 HRFHHFKNGECSCGDYW 804



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 254/492 (51%), Gaps = 8/492 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  Q+A     LM Q+   PD  T+  +L +C      + G+ +H  +  + L  ++ + 
Sbjct: 108 GLAQEAFNLFTLMQQERLEPDKFTFVSILSACSSPAVLNWGREIHVRVMEAGLANDTTVG 167

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LIS+Y+KCG + +A ++F +M + RD VSW+++  +Y   G   +++  +  ML+   
Sbjct: 168 NALISMYAKCGSVRDARRVFDAMAS-RDEVSWTTLTGAYAESGYGEESLKTYHAMLQERV 226

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+   +  V+ AC +   +  G  I+  +++  Y  SDV V  AL  M++K     + A
Sbjct: 227 RPSRITYMNVLSACGSLAALEKGKQIHAHIVESEYH-SDVRVSTALTKMYMKCGA-FKDA 284

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF+ ++ ++ + W  MI      G   +A   F  M+  G  PDR T + V+SAC+  
Sbjct: 285 REVFECLSYRDVIAWNTMIRGFVDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARP 344

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GK++H+ A + GL  DV  G +L++MY+K    GS+ D+R+VFDRM   +V+SWT
Sbjct: 345 GGLARGKEIHARAAKDGLVSDVRFGNALINMYSKA---GSMKDARQVFDRMPKRDVVSWT 401

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            ++  Y     +  E+   F  M+Q  V  N  T+  VLKAC N +     ++++   VK
Sbjct: 402 TLLGRYADC-DQVVESFTTFKQMLQQGVKANKITYMCVLKACSNPVALKWGKEIHAEVVK 460

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   D  V N+L+SMY + G +EDA + FE +  +++V++NT++    +N    +A + 
Sbjct: 461 AGLLADLAVTNALMSMYFKCGSVEDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQR 520

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYS 535
              ++  G+  +A TF ++LS       + +G +  A + K  G       Y  ++ + +
Sbjct: 521 YEVMKSEGMRPNAATFVNVLSACRVCNLVEEGRRQFAFMSKDYGIVPTEKHYACMVDILA 580

Query: 536 RCANVEAAFQVF 547
           R  ++  A  V 
Sbjct: 581 RAGHLREAEDVI 592



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/252 (30%), Positives = 137/252 (54%), Gaps = 5/252 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           ++ G++++A  T   M ++G  PD  TY+ +L +C R      GK +H+   +  L  + 
Sbjct: 307 VDSGQLEEAHGTFHRMLEEGVAPDRATYTTVLSACARPGGLARGKEIHARAAKDGLVSDV 366

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
              N+LI++YSK G + +A ++F  M  KRD+VSW++++  Y +  + V++   F +ML+
Sbjct: 367 RFGNALINMYSKAGSMKDARQVFDRM-PKRDVVSWTTLLGRYADCDQVVESFTTFKQMLQ 425

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G   N+  +  V++ACSN   +  G  I+  ++K G   +D+ V  AL+ M+ K GSV 
Sbjct: 426 QGVKANKITYMCVLKACSNPVALKWGKEIHAEVVKAGLL-ADLAVTNALMSMYFKCGSV- 483

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E A +VF+ M+ ++ V W  +I    Q G   +A++ +  M   G  P+  T   V+SA
Sbjct: 484 -EDAIRVFEGMSMRDVVTWNTLIGGLGQNGRGLEALQRYEVMKSEGMRPNAATFVNVLSA 542

Query: 293 CSELELFTSGKQ 304
           C    L   G++
Sbjct: 543 CRVCNLVEEGRR 554



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 55/194 (28%), Positives = 100/194 (51%), Gaps = 4/194 (2%)

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           ++L  +   G    +Y +  LL        +  G+Q+H  I++ G + N  I N L+ +Y
Sbjct: 14  DVLQYLHRKGPQVDSYDYVKLLQSCVKAKDLAVGKQVHEHILRCGVKPNVYITNTLLKLY 73

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           + C +V  A Q+F +  +++V+SW  MI+G+A  G A  A  +F  M  + ++P+  T++
Sbjct: 74  AHCGSVNEARQLFDKFSNKSVVSWNVMISGYAHRGLAQEAFNLFTLMQQERLEPDKFTFV 133

Query: 595 AVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           ++LSACS   +++ G + H R M  E G+         ++ +  + GS+ +A     +M 
Sbjct: 134 SILSACSSPAVLNWGREIHVRVM--EAGLANDTTVGNALISMYAKCGSVRDARRVFDAMA 191

Query: 654 LSADVLVWRTFLGA 667
            S D + W T  GA
Sbjct: 192 -SRDEVSWTTLTGA 204


>gi|328774753|gb|AEB39776.1| pentatricopeptide repeat protein 78 [Funaria hygrometrica]
          Length = 1020

 Score =  611 bits (1576), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 301/813 (37%), Positives = 498/813 (61%), Gaps = 9/813 (1%)

Query: 50   LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
            ++ ++  G +++A+  L  M Q G      T   LL SC        G+ +H    +++L
Sbjct: 216  VVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSALECGREIHVEAMKARL 275

Query: 110  EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
              +  + N ++++Y+KCG ++EA ++F  M  K  +VSW+ +I  Y + G    A  +F 
Sbjct: 276  LFDVNVANCILNMYAKCGSIHEAREVFDKMETK-SVVSWTIIIGGYADCGHSEIAFEIFQ 334

Query: 170  EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            +M + G  PN   +  V+ A S    +  G  ++  +L  G+ +SD+ VG AL+ M+ K 
Sbjct: 335  KMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAGH-ESDLAVGTALVKMYAKC 393

Query: 229  GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            GS   +   +VF+K+  ++ + W  MI    + G   +A  ++  M   G +P++ T   
Sbjct: 394  GS--YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYHQMQREGMMPNKITYVI 451

Query: 289  VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
            +++AC        G+++HS  ++ G   D+ V  +L+ MYA+C   GS+ D+R +F++M+
Sbjct: 452  LLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARC---GSIKDARLLFNKMV 508

Query: 349  DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
              +++SWTA+I G  +SG    EA+ +F DM Q  + PN  T+ S+L AC +    +   
Sbjct: 509  RKDIISWTAMIGGLAKSG-LGAEALAVFQDMQQAGLKPNRVTYTSILNACSSPAALDWGR 567

Query: 409  QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            +++   ++ G A D  V N+L++MY+  G ++DAR+ F+ + ++++V+YN M+  YA + 
Sbjct: 568  RIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMTQRDIVAYNAMIGGYAAHN 627

Query: 469  NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              ++A +L   +++ G+     T+ ++L+  ++ G++   ++IH+ ++K G+ S+  + N
Sbjct: 628  LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEIHSLVLKDGYLSDTSLGN 687

Query: 529  ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            AL+S Y++C +   A  VF +M  RNVISW ++I G A+HG     L++F +M  +GIKP
Sbjct: 688  ALVSTYAKCGSFSDALLVFDKMMKRNVISWNAIIGGCAQHGRGQDVLQLFERMKMEGIKP 747

Query: 589  NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
            + +T++++LSACSHAGL+ EG ++F SM  + GI   +EHY CMVDLLGR+G L E    
Sbjct: 748  DIVTFVSLLSACSHAGLLEEGRRYFCSMSRDFGITPTIEHYGCMVDLLGRAGQLDEVEAL 807

Query: 649  IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
            I++MP  A+  +W   LGACR+HG+  + + AAE  L+ DP + A ++ LS++YA+AG W
Sbjct: 808  IKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDPDNAAVYVALSHMYAAAGMW 867

Query: 709  EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
            +  A +RK M++R + KE G SWIE  +K+H F   + SHP++ +IYAELD+L   +K  
Sbjct: 868  DSAAKLRKLMEQRGVTKEPGRSWIEVGDKLHYFVAEDRSHPESEKIYAELDKLTHAMKME 927

Query: 769  GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
            GY+PDT  V+H+++E +K   +  HSE++A+A+GLIST    PIR+FKNLRVC DCHTA 
Sbjct: 928  GYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTLPGTPIRIFKNLRVCPDCHTAT 987

Query: 829  KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K+I+ +  REIV RD NRFHH KDG CSC DYW
Sbjct: 988  KFITKIVDREIVARDVNRFHHFKDGVCSCGDYW 1020



 Score =  315 bits (806), Expect = 1e-82,   Method: Compositional matrix adjust.
 Identities = 182/614 (29%), Positives = 330/614 (53%), Gaps = 11/614 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+  +  + Q+G   +   Y  +LK CI  ++   G+ VH  + +     +   +N+LI
Sbjct: 124 RAMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTVNALI 183

Query: 121 SLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           ++Y +CG + EA +++  + + +R + SW++M+  YV  G   +A+ +  EM + G    
Sbjct: 184 NMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALG 243

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
                 ++ +C +   +  G  I+   +K      DV V   +++M+ K GS+    A +
Sbjct: 244 RATTMRLLSSCKSPSALECGREIHVEAMKARLL-FDVNVANCILNMYAKCGSI--HEARE 300

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VFDKM  K+ V WT++I      G    A  +F  M   G +P+R T   V++A S    
Sbjct: 301 VFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAA 360

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              GK +HS  +  G   D+ VG +LV MYAKC   GS  D R+VF+++++ ++++W  +
Sbjct: 361 LKWGKTVHSHILNAGHESDLAVGTALVKMYAKC---GSYKDCRQVFEKLVNRDLIAWNTM 417

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I G  + GG  +EA +++  M +  + PN  T+  +L AC N    +   ++++  VK G
Sbjct: 418 IGGLAE-GGNWEEASEIYHQMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDG 476

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  V N+LISMYAR G ++DAR  F  +  K+++S+  M+   AK+    +A  +  
Sbjct: 477 FMFDISVQNALISMYARCGSIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQ 536

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +++  G+  +  T+ S+L+  SS  A+  G +IH ++I++G  ++  + N L++MYS C 
Sbjct: 537 DMQQAGLKPNRVTYTSILNACSSPAALDWGRRIHQQVIEAGLATDAHVANTLVNMYSMCG 596

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +V+ A QVF  M  R+++++ +MI G+A H     AL++F ++  +G+KP+ +TYI +L+
Sbjct: 597 SVKDARQVFDRMTQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLN 656

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           AC+++G + E  K   S+  + G +        +V    + GS ++AL     M +  +V
Sbjct: 657 ACANSGSL-EWAKEIHSLVLKDGYLSDTSLGNALVSTYAKCGSFSDALLVFDKM-MKRNV 714

Query: 659 LVWRTFLGACRVHG 672
           + W   +G C  HG
Sbjct: 715 ISWNAIIGGCAQHG 728



 Score =  267 bits (683), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 165/540 (30%), Positives = 287/540 (53%), Gaps = 21/540 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
           +  +++ C   +++  G  ++  +++ C   D       ALI+M+++ GS+  E A +V+
Sbjct: 144 YMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTV--NALINMYIQCGSI--EEARQVW 199

Query: 241 DKM--TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +K+  TE+    W  M+    Q G   +A++L  +M   G    R T   ++S+C     
Sbjct: 200 NKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHGLALGRATTMRLLSSCKSPSA 259

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G+++H  A++  L  DV V   +++MYAKC   GS+ ++R+VFD+M   +V+SWT I
Sbjct: 260 LECGREIHVEAMKARLLFDVNVANCILNMYAKC---GSIHEAREVFDKMETKSVVSWTII 316

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I GY    G  + A ++F  M Q  V PN  T+ +VL A          + V++H +  G
Sbjct: 317 IGGYADC-GHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPAALKWGKTVHSHILNAG 375

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  VG +L+ MYA+ G  +D R+ FE L  ++L+++NTM+   A+  N E+A E+ H
Sbjct: 376 HESDLAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTMIGGLAEGGNWEEASEIYH 435

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +++  G+  +  T+  LL+   +  A+  G +IH+R++K GF  +  + NALISMY+RC 
Sbjct: 436 QMQREGMMPNKITYVILLNACVNPTALHWGREIHSRVVKDGFMFDISVQNALISMYARCG 495

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +++ A  +F +M  +++ISWT+MI G AK G  A AL +F  M   G+KPN +TY ++L+
Sbjct: 496 SIKDARLLFNKMVRKDIISWTAMIGGLAKSGLGAEALAVFQDMQQAGLKPNRVTYTSILN 555

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACS    +  G +       E G+         +V++    GS+ +A +    M    D+
Sbjct: 556 ACSSPAALDWG-RRIHQQVIEAGLATDAHVANTLVNMYSMCGSVKDARQVFDRMT-QRDI 613

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMI--LEQD--PQDPAAHILLSNLYASAGHWEYVANI 714
           + +   +G    H    LGK A ++   L+++    D   +I + N  A++G  E+   I
Sbjct: 614 VAYNAMIGGYAAH---NLGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAKEI 670



 Score =  140 bits (354), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 92/311 (29%), Positives = 158/311 (50%), Gaps = 5/311 (1%)

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           G+D+ A+ +   + Q     N   +  +LK C  + D     +V+ H ++    LD    
Sbjct: 121 GKDR-AMDVVQYLQQQGARVNSCDYMKMLKRCIEVKDLVAGREVHEHIIQHCTVLDQYTV 179

Query: 427 NSLISMYARSGRMEDARKAFESL--FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           N+LI+MY + G +E+AR+ +  L   E+ + S+N MV  Y +    E+A +LL E++  G
Sbjct: 180 NALINMYIQCGSIEEARQVWNKLNHTERTVHSWNAMVVGYVQYGYIEEALKLLREMQQHG 239

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +     T   LLS   S  A+  G +IH   +K+    +  + N +++MY++C ++  A 
Sbjct: 240 LALGRATTMRLLSSCKSPSALECGREIHVEAMKARLLFDVNVANCILNMYAKCGSIHEAR 299

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           +VF +ME ++V+SWT +I G+A  G +  A EIF KM  +G+ PN ITYI VL+A S   
Sbjct: 300 EVFDKMETKSVVSWTIIIGGYADCGHSEIAFEIFQKMQQEGVVPNRITYINVLNAFSGPA 359

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            +  G K   S     G    +     +V +  + GS  +  +    + ++ D++ W T 
Sbjct: 360 ALKWG-KTVHSHILNAGHESDLAVGTALVKMYAKCGSYKDCRQVFEKL-VNRDLIAWNTM 417

Query: 665 LGACRVHGDTE 675
           +G     G+ E
Sbjct: 418 IGGLAEGGNWE 428


>gi|168044807|ref|XP_001774871.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162673765|gb|EDQ60283.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 902

 Score =  610 bits (1574), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 303/813 (37%), Positives = 494/813 (60%), Gaps = 9/813 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ ++  G ++KA+  L  M Q G  PD  T    L SC        G+ +H    ++ L
Sbjct: 98  VVGYIQYGYIEKALKLLRQMQQHGLAPDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGL 157

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +  + N ++++Y+KCG + EA ++F  M  K+ +VSW+  I  Y + G+   A  +F 
Sbjct: 158 LFDVKVANCILNMYAKCGSIEEAREVFDKM-EKKSVVSWTITIGGYADCGRSETAFEIFQ 216

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
           +M + G  PN   + +V+ A S+   +  G  ++  +L  G+ +SD  VG AL+ M+ K 
Sbjct: 217 KMEQEGVVPNRITYISVLNAFSSPAALKWGKAVHSRILNAGH-ESDTAVGTALVKMYAKC 275

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           GS   +   +VF+K+  ++ + W  MI    + G   +A  ++  M   G +P++ T   
Sbjct: 276 GS--YKDCRQVFEKLVNRDLIAWNTMIGGLAEGGYWEEASEVYNQMQREGVMPNKITYVI 333

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           +++AC        GK++HS   + G   D+ V  +L+ MY++C   GS+ D+R VFD+M+
Sbjct: 334 LLNACVNSAALHWGKEIHSRVAKAGFTSDIGVQNALISMYSRC---GSIKDARLVFDKMV 390

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +V+SWTA+I G  +SG    EA+ ++ +M Q  V PN  T+ S+L AC +        
Sbjct: 391 RKDVISWTAMIGGLAKSG-FGAEALTVYQEMQQAGVEPNRVTYTSILNACSSPAALEWGR 449

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +++   V+ G A D  VGN+L++MY+  G ++DAR+ F+ + ++++V+YN M+  YA + 
Sbjct: 450 RIHQQVVEAGLATDAHVGNTLVNMYSMCGSVKDARQVFDRMIQRDIVAYNAMIGGYAAHN 509

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             ++A +L   +++ G+     T+ ++L+  ++ G++    +IH  + K GF S+  + N
Sbjct: 510 LGKEALKLFDRLQEEGLKPDKVTYINMLNACANSGSLEWAREIHTLVRKGGFFSDTSVGN 569

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+S Y++C +   A  VF++M  RNVISW ++I G A+HG    AL++F +M  +G+KP
Sbjct: 570 ALVSTYAKCGSFSDASIVFEKMTKRNVISWNAIIGGSAQHGRGQDALQLFERMKMEGVKP 629

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + +T++++LSACSHAGL+ EG ++F SM  +  I+  +EHY CMVDLLGR+G L EA   
Sbjct: 630 DIVTFVSLLSACSHAGLLEEGRRYFCSMSQDFAIIPTIEHYGCMVDLLGRAGQLDEAEAL 689

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I++MP  A+  +W   LGACR+HG+  + + AAE  L+ D  +   ++ LS++YA+AG W
Sbjct: 690 IKTMPFQANTRIWGALLGACRIHGNVPVAERAAESSLKLDLDNAVVYVALSHMYAAAGMW 749

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           +  A +RK M++R + KE G SWI+  +K+H F   + SHP++ +IYAELD+L   +K  
Sbjct: 750 DSAAKLRKLMEQRGVTKEPGRSWIQVGDKLHYFVAEDRSHPQSEKIYAELDRLTHAMKMK 809

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+PDT  V+H+++E +K   +  HSE++A+A+GLIST     I +FKNLRVC DCHTA 
Sbjct: 810 GYVPDTRSVMHDVDEGEKENAVCHHSERLAIAYGLISTPPGTRIHIFKNLRVCPDCHTAT 869

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS +  REI+ RD NRFHH KDG CSC DYW
Sbjct: 870 KFISKIVDREIIARDVNRFHHFKDGVCSCGDYW 902



 Score =  320 bits (821), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 180/613 (29%), Positives = 331/613 (53%), Gaps = 11/613 (1%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+  +  + Q+G   +   Y  +LK CI  ++   G+ VH  + + +  P+   +N+LI+
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVNALIN 66

Query: 122 LYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           +Y +CG + EA +++K +   +R + SW++M+  Y+  G    A+ +  +M + G  P+ 
Sbjct: 67  MYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLAPDR 126

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKV 239
               + + +C +   +  G  I+   ++ G    DV V   +++M+ K GS+  E A +V
Sbjct: 127 TTIMSFLSSCKSPGALEWGREIHFQAMQAGLL-FDVKVANCILNMYAKCGSI--EEAREV 183

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FDKM +K+ V WT+ I      G    A  +F  M   G +P+R T   V++A S     
Sbjct: 184 FDKMEKKSVVSWTITIGGYADCGRSETAFEIFQKMEQEGVVPNRITYISVLNAFSSPAAL 243

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GK +HS  +  G   D  VG +LV MYAKC   GS  D R+VF+++++ ++++W  +I
Sbjct: 244 KWGKAVHSRILNAGHESDTAVGTALVKMYAKC---GSYKDCRQVFEKLVNRDLIAWNTMI 300

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            G  + GG  +EA ++++ M +  V PN  T+  +L AC N    +  +++++   K G 
Sbjct: 301 GGLAE-GGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
             D  V N+LISMY+R G ++DAR  F+ +  K+++S+  M+   AK+    +A  +  E
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           ++  GV  +  T+ S+L+  SS  A+  G +IH +++++G  ++  + N L++MYS C +
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWGRRIHQQVVEAGLATDAHVGNTLVNMYSMCGS 479

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           V+ A QVF  M  R+++++ +MI G+A H     AL++F ++  +G+KP+ +TYI +L+A
Sbjct: 480 VKDARQVFDRMIQRDIVAYNAMIGGYAAHNLGKEALKLFDRLQEEGLKPDKVTYINMLNA 539

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           C+++G + E  +   ++  + G          +V    + GS ++A      M    +V+
Sbjct: 540 CANSGSL-EWAREIHTLVRKGGFFSDTSVGNALVSTYAKCGSFSDASIVFEKMT-KRNVI 597

Query: 660 VWRTFLGACRVHG 672
            W   +G    HG
Sbjct: 598 SWNAIIGGSAQHG 610



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 171/558 (30%), Positives = 298/558 (53%), Gaps = 19/558 (3%)

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+ +   + + G   N   +  +++ C   +++  G  ++  +++         V  ALI
Sbjct: 7   AVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTVN-ALI 65

Query: 224 DMFVK-GSVDLESAYKVFDKMT--EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           +M+++ GS+  E A +V+ K++  E+    W  M+    Q G    A++L   M   G  
Sbjct: 66  NMYIQCGSI--EEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHGLA 123

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PDR T+   +S+C        G+++H  A++ GL  DV V   +++MYAKC   GS++++
Sbjct: 124 PDRTTIMSFLSSCKSPGALEWGREIHFQAMQAGLLFDVKVANCILNMYAKC---GSIEEA 180

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R+VFD+M   +V+SWT  I GY    GR + A ++F  M Q  V PN  T+ SVL A  +
Sbjct: 181 REVFDKMEKKSVVSWTITIGGYADC-GRSETAFEIFQKMEQEGVVPNRITYISVLNAFSS 239

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                  + V++  +  G   D  VG +L+ MYA+ G  +D R+ FE L  ++L+++NTM
Sbjct: 240 PAALKWGKAVHSRILNAGHESDTAVGTALVKMYAKCGSYKDCRQVFEKLVNRDLIAWNTM 299

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +   A+    E+A E+ ++++  GV  +  T+  LL+   +  A+  G++IH+R+ K+GF
Sbjct: 300 IGGLAEGGYWEEASEVYNQMQREGVMPNKITYVILLNACVNSAALHWGKEIHSRVAKAGF 359

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            S+  + NALISMYSRC +++ A  VF +M  ++VISWT+MI G AK GF A AL ++ +
Sbjct: 360 TSDIGVQNALISMYSRCGSIKDARLVFDKMVRKDVISWTAMIGGLAKSGFGAEALTVYQE 419

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M   G++PN +TY ++L+ACS    +  G +       E G+         +V++    G
Sbjct: 420 MQQAGVEPNRVTYTSILNACSSPAALEWG-RRIHQQVVEAGLATDAHVGNTLVNMYSMCG 478

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDP--AAHI 696
           S+ +A +    M +  D++ +   +G    H    LGK A ++   L+++   P    +I
Sbjct: 479 SVKDARQVFDRM-IQRDIVAYNAMIGGYAAH---NLGKEALKLFDRLQEEGLKPDKVTYI 534

Query: 697 LLSNLYASAGHWEYVANI 714
            + N  A++G  E+   I
Sbjct: 535 NMLNACANSGSLEWAREI 552



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 108/203 (53%), Gaps = 6/203 (2%)

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
           +  + A +++  ++  G   ++  +  +L     +  +  G Q+H  II+     +    
Sbjct: 2   IEKDGAVDVVQYLQQQGAQVNSSDYMKMLKRCIEVKDLVAGRQVHQHIIQHRTVPDQYTV 61

Query: 528 NALISMYSRCANVEAAFQVFKEME--DRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           NALI+MY +C ++E A QV+K++   +R V SW +M+ G+ ++G+  +AL++  +M   G
Sbjct: 62  NALINMYIQCGSIEEARQVWKKLSYMERTVHSWNAMVVGYIQYGYIEKALKLLRQMQQHG 121

Query: 586 IKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
           + P+  T ++ LS+C   G +  G + HF++M  + G++  ++   C++++  + GS+ E
Sbjct: 122 LAPDRTTIMSFLSSCKSPGALEWGREIHFQAM--QAGLLFDVKVANCILNMYAKCGSIEE 179

Query: 645 ALEFIRSMPLSADVLVWRTFLGA 667
           A E    M     V+ W   +G 
Sbjct: 180 AREVFDKME-KKSVVSWTITIGG 201


>gi|168023826|ref|XP_001764438.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|54695178|dbj|BAD67154.1| PpPPR_91 [Physcomitrella patens]
 gi|162684302|gb|EDQ70705.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 868

 Score =  610 bits (1573), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 318/840 (37%), Positives = 484/840 (57%), Gaps = 41/840 (4%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR+++AI  L ++ Q+G   + +TY  +++ C ++R F  GK+VH  L    +E +  + 
Sbjct: 35  GRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGVEIDIYLG 94

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI+ YSK  D+  A ++F+ M   RD+V+WSSMI++Y        A   F  M +   
Sbjct: 95  NSLINFYSKFEDVASAEQVFRRM-TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMTDANI 153

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F ++++AC+N   +  G  I+  +   G  ++DV V  ALI M+ K   ++  A
Sbjct: 154 EPNRITFLSILKACNNYSILEKGRKIHTIVKAMG-METDVAVATALITMYSKCG-EISVA 211

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF KMTE+N V WT +I    Q     +A  L+  M+ +G  P+  T   ++++C+  
Sbjct: 212 CEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVSLLNSCNTP 271

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E    G+++HS     GL  D+ V  +L+ MY KC    SV ++R++FDRM   +V+SW+
Sbjct: 272 EALNRGRRIHSHISERGLETDMIVANALITMYCKCN---SVQEAREIFDRMSKRDVISWS 328

Query: 357 AIITGYVQSGGRDKEAV----KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           A+I GY QSG +DKE++    +L   M +  V PN  TF S+L+AC          Q++ 
Sbjct: 329 AMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQGRQIHA 388

Query: 413 HAVKRG----RALDDCVGN---------------------------SLISMYARSGRMED 441
              K G    R+L   + N                           S +SMY + G +  
Sbjct: 389 ELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMANKNVVAWTSFLSMYIKCGDLSS 448

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A K F  +  +N+VS+N M+  YA+N +  K FELL  ++  G      T  ++L    +
Sbjct: 449 AEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACGA 508

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +  + +G+ +HA  +K G ES+  +  +LI MYS+C  V  A  VF +M +R+ ++W +M
Sbjct: 509 LAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSNRDTVAWNAM 568

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           + G+ +HG    A+++F +ML + + PN IT  AV+SACS AGL+ EG + FR M ++  
Sbjct: 569 LAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMMQEDFK 628

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           +  R +HY CMVDLLGR+G L EA EFI+SMP   D+ VW   LGAC+ H + +L + AA
Sbjct: 629 MTPRKQHYGCMVDLLGRAGRLQEAEEFIQSMPCEPDISVWHALLGACKSHNNVQLAERAA 688

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
             ILE +P   + +I LSN+YA AG W+    +R+ M +R L K+ G S IE D ++H F
Sbjct: 689 HHILELEPSYASVYITLSNIYAQAGRWDDSTKVRRVMDDRGLKKDRGESSIEIDGRIHTF 748

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
              + +HP+   I+AEL+ L  ++KE GY PD  FVLH++++ QK + L  HSEK+A+A+
Sbjct: 749 VAEDCAHPEIDAIHAELETLTKEMKEAGYTPDMRFVLHDVDDVQKEKALCHHSEKLAIAY 808

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GL+ T    PIR+ KNLRVCGDCHTA K+IS +  REIV RD+NRFH+  +G CSC D+W
Sbjct: 809 GLLKTPSGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFNNGTCSCGDFW 868



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 221/416 (53%), Gaps = 11/416 (2%)

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           + R  + G  R+AI+L   +   G L +  T   V+  C++   F  GK +H      G+
Sbjct: 28  VWRLCKAGRLREAIQLLGIIKQRGLLVNSNTYGCVIEHCAKARRFEDGKMVHKQLDELGV 87

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            +D+ +G SL++ Y+K      V  + +VF RM   +V++W+++I  Y  +    K A  
Sbjct: 88  EIDIYLGNSLINFYSKFE---DVASAEQVFRRMTLRDVVTWSSMIAAYAGNNHPAK-AFD 143

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            F  M    + PN  TF S+LKAC N        +++T     G   D  V  +LI+MY+
Sbjct: 144 TFERMTDANIEPNRITFLSILKACNNYSILEKGRKIHTIVKAMGMETDVAVATALITMYS 203

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +  A + F  + E+N+VS+  ++ A A++    +AFEL  ++   G+  +A TF S
Sbjct: 204 KCGEISVACEVFHKMTERNVVSWTAIIQANAQHRKLNEAFELYEQMLQAGISPNAVTFVS 263

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           LL+  ++  A+ +G +IH+ I + G E++  + NALI+MY +C +V+ A ++F  M  R+
Sbjct: 264 LLNSCNTPEALNRGRRIHSHISERGLETDMIVANALITMYCKCNSVQEAREIFDRMSKRD 323

Query: 555 VISWTSMITGFAKHGFAAR-----ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           VISW++MI G+A+ G+  +       ++  +M  +G+ PN +T++++L AC+  G + +G
Sbjct: 324 VISWSAMIAGYAQSGYKDKESIDEVFQLLERMRREGVFPNKVTFMSILRACTAHGALEQG 383

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
            +   +   + G          + ++  + GS+ EA +    M  + +V+ W +FL
Sbjct: 384 -RQIHAELSKVGFELDRSLQTAIFNMYAKCGSIYEAEQVFSKMA-NKNVVAWTSFL 437



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/177 (33%), Positives = 91/177 (51%), Gaps = 2/177 (1%)

Query: 31  SSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           S+   F   PT +    N +I  +  +G + K    L  M  +G  PD  T   +L++C 
Sbjct: 448 SAEKVFSEMPTRNVVSWNLMIAGYAQNGDIVKVFELLSSMKAEGFQPDRVTVITILEACG 507

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
                  GKLVH+   +  LE ++V+  SLI +YSKCG + EA  +F  M N RD V+W+
Sbjct: 508 ALAGLERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGQVAEARTVFDKMSN-RDTVAWN 566

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           +M++ Y   G  ++A+ +F  ML+    PNE   +AVI ACS    V  G  I+  +
Sbjct: 567 AMLAGYGQHGDGLEAVDLFKRMLKERVSPNEITLTAVISACSRAGLVQEGREIFRMM 623


>gi|115478174|ref|NP_001062682.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|47848472|dbj|BAD22327.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|47848643|dbj|BAD22491.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113630915|dbj|BAF24596.1| Os09g0251500 [Oryza sativa Japonica Group]
 gi|215767397|dbj|BAG99625.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 877

 Score =  609 bits (1570), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 319/808 (39%), Positives = 485/808 (60%), Gaps = 11/808 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G  + AI     M  +G   +     ++LK C+   +  LG  VH++   +    +  
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLK-CVP--DAQLGAQVHAMAMATGFGSDVF 136

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+++Y   G +++A ++F   G++R+ VSW+ ++S+YV   +  DAI +F EM+  
Sbjct: 137 VANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWS 196

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P E+ FS V+ AC+ + N+  G  ++  +++ GY + DV    AL+DM+VK G VD+
Sbjct: 197 GIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGY-EKDVFTANALVDMYVKMGRVDI 255

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            S   +F+KM + + V W  +I+ C   G    AI L L M  SG +P+ F LS ++ AC
Sbjct: 256 ASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKAC 313

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +    F  G+Q+H + I+     D  +G  LVDMYAK   +  +DD+ KVFD M   +++
Sbjct: 314 AGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK---NHFLDDAMKVFDWMSHRDLI 370

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
            W A+I+G    GGR  EA  +F  + +  +  N  T A+VLK+  +L  ++   QV+  
Sbjct: 371 LWNALISG-CSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHAL 429

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           A K G   D  V N LI  Y +   + DA + FE     ++++  +M+ A ++  + E A
Sbjct: 430 AEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGA 489

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +L  E+   G+    +  +SLL+  +S+ A  +G+Q+HA +IK  F S+    NAL+  
Sbjct: 490 IKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYT 549

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C ++E A   F  + +R V+SW++MI G A+HG   RALE+F +M+ +GI PN IT 
Sbjct: 550 YAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKRALELFGRMVDEGINPNHITM 609

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            +VL AC+HAGL+ E  ++F SM +  GI +  EHY+CM+DLLGR+G L +A+E + SMP
Sbjct: 610 TSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMP 669

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
             A+  VW   LGA RVH D ELGK AAE +   +P+    H+LL+N YAS+G W  VA 
Sbjct: 670 FQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSGTHVLLANTYASSGMWNEVAK 729

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +RK MK+ N+ KE   SW+E  +KVH F VG+ SHP T EIY++LD+L   + + GY+P+
Sbjct: 730 VRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKEIYSKLDELGDLMSKAGYIPN 789

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +  LH+L+  +K   L  HSE++AVAF L+ST    PIRV KNLR+C DCH A K+IS 
Sbjct: 790 VDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIRVKKNLRICRDCHMAFKFISN 849

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +  REI++RD NRFHH +DG CSC DYW
Sbjct: 850 IVSREIIIRDINRFHHFRDGTCSCGDYW 877



 Score =  259 bits (663), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 182/629 (28%), Positives = 316/629 (50%), Gaps = 22/629 (3%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G  +H+ L +S    +  + N LIS YSKC     A ++F  + +    VSWSS++++Y 
Sbjct: 23  GAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVFDEIPDPCH-VSWSSLVTAYS 79

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           N G    AI  F  M   G C NE+    V++   + +   +G  ++   +  G F SDV
Sbjct: 80  NNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQ---LGAQVHAMAMATG-FGSDV 135

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            V  AL+ M+  G   ++ A +VFD+  +E+N V W  +++   +     DAI++F +M+
Sbjct: 136 FVANALVAMY-GGFGFMDDARRVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMV 194

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
            SG  P  F  S VV+AC+      +G+Q+H+  +R G   DV    +LVDMY K    G
Sbjct: 195 WSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKM---G 251

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            VD +  +F++M D +V+SW A+I+G V + G D  A++L   M    + PN F  +S+L
Sbjct: 252 RVDIASVIFEKMPDSDVVSWNALISGCVLN-GHDHRAIELLLQMKSSGLVPNVFMLSSIL 310

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           KAC      ++  Q++   +K     DD +G  L+ MYA++  ++DA K F+ +  ++L+
Sbjct: 311 KACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMSHRDLI 370

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            +N ++   +     ++AF + + +   G+G +  T A++L   +S+ A     Q+HA  
Sbjct: 371 LWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKSTASLEAASATRQVHALA 430

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
            K GF  +  + N LI  Y +C+ +  A +VF+E    ++I+ TSMIT  ++      A+
Sbjct: 431 EKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGDIIAVTSMITALSQCDHGEGAI 490

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           ++F +ML  G++P+     ++L+AC+      +G K   +   +   +        +V  
Sbjct: 491 KLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG-KQVHAHLIKRQFMSDAFAGNALVYT 549

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ-DPQDPAA 694
             + GS+ +A     S+P    V+ W   +G    HG    GK A E+     D      
Sbjct: 550 YAKCGSIEDAELAFSSLP-ERGVVSWSAMIGGLAQHGH---GKRALELFGRMVDEGINPN 605

Query: 695 HILLSNLYASAGHWEYVANIRK---RMKE 720
           HI ++++  +  H   V   ++    MKE
Sbjct: 606 HITMTSVLCACNHAGLVDEAKRYFNSMKE 634



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 39/118 (33%), Positives = 65/118 (55%), Gaps = 2/118 (1%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           SA T +  L+  ++  A+  G  +HA ++KSGF ++  + N LIS YS+C     A +VF
Sbjct: 3   SAGTISQQLTRYAAAQALLPGAHLHANLLKSGFLAS--LRNHLISFYSKCRRPCCARRVF 60

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
            E+ D   +SW+S++T ++ +G    A++ F+ M A+G+  N      VL     A L
Sbjct: 61  DEIPDPCHVSWSSLVTAYSNNGLPRSAIQAFHGMRAEGVCCNEFALPVVLKCVPDAQL 118


>gi|225436683|ref|XP_002262885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 866

 Score =  608 bits (1569), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 321/833 (38%), Positives = 502/833 (60%), Gaps = 14/833 (1%)

Query: 32  SSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIR 90
           S   F   P      +N L++  +     K    L L  ++   P D  + S +LK C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
             +  +GK VH    +     +  +  SL+ +Y K   + +  ++F  M   +++VSW+S
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVSWTS 163

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           +++ Y   G    A+ +F +M   G  PN + F+AV+   +    V  G  ++  ++K G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             DS + VG ++++M+ K S+ +  A  VFD M  +N V W  MI      G   +A  L
Sbjct: 224 -LDSTIFVGNSMVNMYSK-SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M L G    +   + V+  C+ ++  +  KQLH   I+ G   D+ +  +L+  Y+K
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 331 CTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           C+    +DD+ K+F  M    NV+SWTAII+GYVQ+G  D+ A+ LF  M +  V PNHF
Sbjct: 342 CS---EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR-AMNLFCQMRREGVRPNHF 397

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           T++++L A   +  S    Q++   VK        VG +L   Y++ G   +A K FE +
Sbjct: 398 TYSTILTANAAVSPS----QIHALVVKTNYENSPSVGTALSDSYSKIGDANEAAKIFELI 453

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG-ASSIGAIGKG 508
            EK++V+++ M+  YA+  + E A ++  ++   GV  + +TF+S+L+  A+   ++ +G
Sbjct: 454 DEKDIVAWSAMLSGYAQMGDIEGAVKIFLQLAKEGVEPNEFTFSSVLNACAAPTASVEQG 513

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           +Q H+  IKSGF +  C+ +AL++MY++  N+E+A +VFK   DR+++SW SMI+G+A+H
Sbjct: 514 KQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQH 573

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G   ++L+IF +M +  ++ +GIT+I V+SAC+HAGL++EG ++F  M  ++ IV  MEH
Sbjct: 574 GCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEH 633

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y+CMVDL  R+G L +A++ I  MP  A   +WRT L ACRVH + +LG+ AAE ++   
Sbjct: 634 YSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQ 693

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           PQD AA++LLSN+YA+AG+W+  A +RK M  + + KEAG SWIE  NK   F  G+ SH
Sbjct: 694 PQDSAAYVLLSNIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSH 753

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
           P++  IY +L++L++++K+ GY PDT +VLH++EEE K   L QHSE++A+AFGLI+T  
Sbjct: 754 PQSDRIYLKLEELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPP 813

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             PI++ KNLRVCGDCHT IK IS + GR+IV+RDSNRFHH K G CSC DYW
Sbjct: 814 GTPIQIVKNLRVCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 866


>gi|222641140|gb|EEE69272.1| hypothetical protein OsJ_28537 [Oryza sativa Japonica Group]
          Length = 784

 Score =  608 bits (1568), Expect = e-171,   Method: Compositional matrix adjust.
 Identities = 310/768 (40%), Positives = 468/768 (60%), Gaps = 8/768 (1%)

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            LG  VH++   +    +  + N+L+++Y   G +++A ++F   G++R+ VSW+ ++S+
Sbjct: 24  QLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDARRVFDEAGSERNAVSWNGLMSA 83

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YV   +  DAI +F EM+  G  P E+ FS V+ AC+ + N+  G  ++  +++ GY + 
Sbjct: 84  YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGY-EK 142

Query: 215 DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           DV    AL+DM+VK G VD+ S   +F+KM + + V W  +I+ C   G    AI L L 
Sbjct: 143 DVFTANALVDMYVKMGRVDIASV--IFEKMPDSDVVSWNALISGCVLNGHDHRAIELLLQ 200

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M  SG +P+ F LS ++ AC+    F  G+Q+H + I+     D  +G  LVDMYAK   
Sbjct: 201 MKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYIGVGLVDMYAK--- 257

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
           +  +DD+ KVFD M   +++ W A+I+G    GGR  EA  +F  + +  +  N  T A+
Sbjct: 258 NHFLDDAMKVFDWMSHRDLILWNALISG-CSHGGRHDEAFSIFYGLRKEGLGVNRTTLAA 316

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           VLK+  +L  ++   QV+  A K G   D  V N LI  Y +   + DA + FE     +
Sbjct: 317 VLKSTASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSCLSDAIRVFEECSSGD 376

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +++  +M+ A ++  + E A +L  E+   G+    +  +SLL+  +S+ A  +G+Q+HA
Sbjct: 377 IIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 436

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
            +IK  F S+    NAL+  Y++C ++E A   F  + +R V+SW++MI G A+HG   R
Sbjct: 437 HLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 496

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           ALE+F +M+ +GI PN IT  +VL AC+HAGL+ E  ++F SM +  GI +  EHY+CM+
Sbjct: 497 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 556

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA 693
           DLLGR+G L +A+E + SMP  A+  VW   LGA RVH D ELGK AAE +   +P+   
Sbjct: 557 DLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPELGKLAAEKLFILEPEKSG 616

Query: 694 AHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLE 753
            H+LL+N YAS+G W  VA +RK MK+ N+ KE   SW+E  +KVH F VG+ SHP T E
Sbjct: 617 THVLLANTYASSGMWNEVAKVRKLMKDSNIKKEPAMSWVEVKDKVHTFIVGDKSHPMTKE 676

Query: 754 IYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIR 813
           IY++LD+L   + + GY+P+ +  LH+L+  +K   L  HSE++AVAF L+ST    PIR
Sbjct: 677 IYSKLDELGDLMSKAGYIPNVDVDLHDLDRSEKELLLSHHSERLAVAFALLSTPPGAPIR 736

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           V KNLR+C DCH A K+IS +  REI++RD NRFHH +DG CSC DYW
Sbjct: 737 VKKNLRICRDCHMAFKFISNIVSREIIIRDINRFHHFRDGTCSCGDYW 784



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/512 (28%), Positives = 269/512 (52%), Gaps = 9/512 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ + +   AI     M   G  P    +S ++ +C  SRN   G+ VH+++ R   E +
Sbjct: 84  YVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGSRNIDAGRQVHAMVVRMGYEKD 143

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+L+ +Y K G ++ A+ IF+ M +  D+VSW+++IS  V  G    AI + ++M 
Sbjct: 144 VFTANALVDMYVKMGRVDIASVIFEKMPDS-DVVSWNALISGCVLNGHDHRAIELLLQMK 202

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN +  S++++AC+      +G  I+GF++K    DSD  +G  L+DM+ K    
Sbjct: 203 SSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANA-DSDDYIGVGLVDMYAKNHF- 260

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A KVFD M+ ++ + W  +I+ C+  G   +A  +F  +   G   +R TL+ V+ +
Sbjct: 261 LDDAMKVFDWMSHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEGLGVNRTTLAAVLKS 320

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + LE  ++ +Q+H+ A + G   D  V   L+D Y KC+    + D+ +VF+     ++
Sbjct: 321 TASLEAASATRQVHALAEKIGFIFDAHVVNGLIDSYWKCSC---LSDAIRVFEECSSGDI 377

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++ T++IT   Q     + A+KLF +M++  + P+ F  +S+L AC +L      +QV+ 
Sbjct: 378 IAVTSMITALSQC-DHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHA 436

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +KR    D   GN+L+  YA+ G +EDA  AF SL E+ +VS++ M+   A++ + ++
Sbjct: 437 HLIKRQFMSDAFAGNALVYTYAKCGSIEDAELAFSSLPERGVVSWSAMIGGLAQHGHGKR 496

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALI 531
           A EL   + D G+  +  T  S+L   +  G + + ++    + +  G +     Y+ +I
Sbjct: 497 ALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIDRTEEHYSCMI 556

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMI 562
            +  R   ++ A ++   M    N   W +++
Sbjct: 557 DLLGRAGKLDDAMELVNSMPFQANASVWGALL 588



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 234/450 (52%), Gaps = 21/450 (4%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G   +AI  L  M   G  P++   S +LK+C  +  F LG+ +H  + ++  + +  I
Sbjct: 188 NGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLGRQIHGFMIKANADSDDYI 247

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
              L+ +Y+K   L++A K+F  M + RD++ W+++IS   + G+  +A  +F  + + G
Sbjct: 248 GVGLVDMYAKNHFLDDAMKVFDWM-SHRDLILWNALISGCSHGGRHDEAFSIFYGLRKEG 306

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLE 234
              N    +AV+++ ++ E  +    ++    K G+ FD+ V  G  LID + K S  L 
Sbjct: 307 LGVNRTTLAAVLKSTASLEAASATRQVHALAEKIGFIFDAHVVNG--LIDSYWKCSC-LS 363

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A +VF++ +  + +  T MIT  +Q      AI+LF++M+  G  PD F LS +++AC+
Sbjct: 364 DAIRVFEECSSGDIIAVTSMITALSQCDHGEGAIKLFMEMLRKGLEPDPFVLSSLLNACA 423

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L  +  GKQ+H+  I+     D   G +LV  YAKC   GS++D+   F  + +  V+S
Sbjct: 424 SLSAYEQGKQVHAHLIKRQFMSDAFAGNALVYTYAKC---GSIEDAELAFSSLPERGVVS 480

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W+A+I G  Q  G  K A++LF  M+   + PNH T  SVL AC +    + A++ Y ++
Sbjct: 481 WSAMIGGLAQH-GHGKRALELFGRMVDEGINPNHITMTSVLCACNHAGLVDEAKR-YFNS 538

Query: 415 VKRGRALDDCVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMV-------DAY 464
           +K    +D      + +I +  R+G+++DA +   S+ F+ N   +  ++       D  
Sbjct: 539 MKEMFGIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFQANASVWGALLGASRVHKDPE 598

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
              L +EK F L  E   T V   A T+AS
Sbjct: 599 LGKLAAEKLFILEPEKSGTHV-LLANTYAS 627



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 158/303 (52%), Gaps = 23/303 (7%)

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           V  N F    VLK    + D+ +  QV+  A+  G   D  V N+L++MY   G M+DAR
Sbjct: 6   VCCNEFALPVVLKC---VPDAQLGAQVHAMAMATGFGSDVFVANALVAMYGGFGFMDDAR 62

Query: 444 KAF-ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           + F E+  E+N VS+N ++ AY KN     A ++  E+  +G+  + + F+ +++  +  
Sbjct: 63  RVFDEAGSERNAVSWNGLMSAYVKNDQCGDAIQVFGEMVWSGIQPTEFGFSCVVNACTGS 122

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
             I  G Q+HA +++ G+E +    NAL+ MY +   V+ A  +F++M D +V+SW ++I
Sbjct: 123 RNIDAGRQVHAMVVRMGYEKDVFTANALVDMYVKMGRVDIASVIFEKMPDSDVVSWNALI 182

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           +G   +G   RA+E+  +M + G+ PN     ++L AC+ AG    G    R +   HG 
Sbjct: 183 SGCVLNGHDHRAIELLLQMKSSGLVPNVFMLSSILKACAGAGAFDLG----RQI---HGF 235

Query: 623 VQRM----EHY--ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
           + +     + Y    +VD+  ++  L +A++    M    D+++W   +  C  HG    
Sbjct: 236 MIKANADSDDYIGVGLVDMYAKNHFLDDAMKVFDWMS-HRDLILWNALISGCS-HG---- 289

Query: 677 GKH 679
           G+H
Sbjct: 290 GRH 292


>gi|148909481|gb|ABR17838.1| unknown [Picea sitchensis]
          Length = 795

 Score =  605 bits (1559), Expect = e-170,   Method: Compositional matrix adjust.
 Identities = 297/727 (40%), Positives = 457/727 (62%), Gaps = 8/727 (1%)

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F     + + V W   I  YV  G    A+ ++ +M   G  P++  F +VI+AC +  +
Sbjct: 76  FTQTDIRNNAVVWKETIIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSD 135

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  G  ++  ++  G F+SDV VG AL  M+ K GS  LE+A +VFD+M +++ V W  +
Sbjct: 136 LQAGRKVHEDIIARG-FESDVIVGTALASMYTKCGS--LENARQVFDRMPKRDVVSWNAI 192

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I   +Q G P +A+ LF +M ++G  P+  TL  V+  C+ L     GKQ+H +AIR+G+
Sbjct: 193 IAGYSQNGQPYEALALFSEMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSGI 252

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             DV V   LV+MYAKC   G+V+ + K+F+RM   +V SW AII GY     +  EA+ 
Sbjct: 253 ESDVLVVNGLVNMYAKC---GNVNTAHKLFERMPIRDVASWNAIIGGY-SLNSQHHEALA 308

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            F+ M    + PN  T  SVL AC +L      +Q++ +A++ G   +D VGN+L++MYA
Sbjct: 309 FFNRMQVRGIKPNSITMVSVLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYA 368

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +  A K FE + +KN+V++N ++  Y+++ +  +A  L  E++  G+   ++   S
Sbjct: 369 KCGNVNSAYKLFERMPKKNVVAWNAIISGYSQHGHPHEALALFIEMQAQGIKPDSFAIVS 428

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   +   A+ +G+QIH   I+SGFESN  +   L+ +Y++C NV  A ++F+ M +++
Sbjct: 429 VLPACAHFLALEQGKQIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQD 488

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V+SWT+MI  +  HG    AL +F KM   G K + I + A+L+ACSHAGL+ +G ++F+
Sbjct: 489 VVSWTTMILAYGIHGHGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQYFQ 548

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
            M  ++G+  ++EHYAC+VDLLGR+G L EA   I++M L  D  VW   LGACR+H + 
Sbjct: 549 CMKSDYGLAPKLEHYACLVDLLGRAGHLDEANGIIKNMSLEPDANVWGALLGACRIHCNI 608

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           ELG+ AA+ + E DP +   ++LLSN+YA A  WE VA +RK MKE+ + K+ GCS +  
Sbjct: 609 ELGEQAAKHLFELDPDNAGYYVLLSNIYAEAQRWEDVAKLRKMMKEKGVKKQPGCSVVAV 668

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
              V  F VG+ +HP++ +IYA L+ L  ++++ GY+P+TN  L ++EEE K   L  HS
Sbjct: 669 HRDVQTFLVGDRTHPQSEQIYAMLEILYEQMRKAGYVPNTNLALQDVEEEAKENILSSHS 728

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           EK+A++FG+I+TS   PIR+ KNLRVC DCH A K+IS + GREI++RD+NRFHH+K+G 
Sbjct: 729 EKLAISFGIINTSPGIPIRIMKNLRVCSDCHNATKFISKIVGREIIVRDANRFHHVKNGF 788

Query: 855 CSCNDYW 861
           CSC DYW
Sbjct: 789 CSCGDYW 795



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 184/650 (28%), Positives = 325/650 (50%), Gaps = 55/650 (8%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           +I ++ +G   KA+     M + G +PD   +  ++K+C    +   G+ VH  +     
Sbjct: 92  IIGYVKNGFWNKALRLYYQMQRTGINPDKLVFLSVIKACGSQSDLQAGRKVHEDIIARGF 151

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E + ++  +L S+Y+KCG L  A ++F  M  KRD+VSW+++I+ Y   G+  +A+ +F 
Sbjct: 152 ESDVIVGTALASMYTKCGSLENARQVFDRMP-KRDVVSWNAIIAGYSQNGQPYEALALFS 210

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
           EM   G  PN     +V+  C++   +  G  I+ + ++ G  +SDV V   L++M+ K 
Sbjct: 211 EMQVNGIKPNSSTLVSVMPVCAHLLALEQGKQIHCYAIRSG-IESDVLVVNGLVNMYAKC 269

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G+V+  +A+K+F++M  ++   W  +I   +      +A+  F  M + G  P+  T+  
Sbjct: 270 GNVN--TAHKLFERMPIRDVASWNAIIGGYSLNSQHHEALAFFNRMQVRGIKPNSITMVS 327

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+ AC+ L     G+Q+H +AIR+G   +  VG +LV+MYAKC   G+V+ + K+F+RM 
Sbjct: 328 VLPACAHLFALEQGQQIHGYAIRSGFESNDVVGNALVNMYAKC---GNVNSAYKLFERMP 384

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             NV++W AII+GY Q  G   EA+ LF +M    + P+ F   SVL AC + L     +
Sbjct: 385 KKNVVAWNAIISGYSQH-GHPHEALALFIEMQAQGIKPDSFAIVSVLPACAHFLALEQGK 443

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++ + ++ G   +  VG  L+ +YA+ G +  A+K FE + E+++VS+ TM+ AY  + 
Sbjct: 444 QIHGYTIRSGFESNVVVGTGLVDIYAKCGNVNTAQKLFERMPEQDVVSWTTMILAYGIHG 503

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS--GFESNHCI 526
           + E A  L  ++++TG       F ++L+  S  G + +G Q + + +KS  G       
Sbjct: 504 HGEDALALFSKMQETGTKLDHIAFTAILTACSHAGLVDQGLQ-YFQCMKSDYGLAPKLEH 562

Query: 527 YNALISMYSRCANVEAAFQVFKEME---DRNVISWTSMITGFAKH---GFAARALEIFYK 580
           Y  L+ +  R  +++ A  + K M    D NV  W +++     H       +A +  ++
Sbjct: 563 YACLVDLLGRAGHLDEANGIIKNMSLEPDANV--WGALLGACRIHCNIELGEQAAKHLFE 620

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           +      P+   Y  +LS                ++Y E    QR E  A +  ++   G
Sbjct: 621 L-----DPDNAGYYVLLS----------------NIYAE---AQRWEDVAKLRKMMKEKG 656

Query: 641 SLTEALEFIRSMPLSADVLVWR---TFLGACRVHGDTELGKHAAEMILEQ 687
                   ++  P  + V V R   TFL   R H  +E      E++ EQ
Sbjct: 657 --------VKKQPGCSVVAVHRDVQTFLVGDRTHPQSEQIYAMLEILYEQ 698


>gi|413922867|gb|AFW62799.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 882

 Score =  602 bits (1553), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 327/844 (38%), Positives = 494/844 (58%), Gaps = 15/844 (1%)

Query: 24  SRQNLPPSSSPPFIAQPTTSE-PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           SR  LP ++   F   P       S+ +  + N+G  + A+     M  +G   +     
Sbjct: 48  SRCRLPSAARAVFDEIPDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALP 107

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK---SM 139
           ++LK     R    G  VH+L   ++L  +  + N+L+++Y   G ++EA ++F     +
Sbjct: 108 VVLKCAPDVR---FGAQVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGV 164

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
           G +R+ VSW++MIS+YV   +  DAI +F EM+  G  PNE+ FS V+ AC+ + ++  G
Sbjct: 165 GGERNAVSWNTMISAYVKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAG 224

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             ++G +++ GY + DV    AL+DM+ K   D+E A  VF+KM   + V W   I+ C 
Sbjct: 225 RQVHGAVVRTGY-EKDVFTANALVDMYSKLG-DIEMAATVFEKMPAADVVSWNAFISGCV 282

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             G    A+ L L M  SG +P+ FTLS V+ AC+    F  G+Q+H + ++     D  
Sbjct: 283 THGHDHRALELLLQMKSSGLVPNVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEF 342

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V   LVDMYAK    G +DD+RKVFD M   +++ W A+I+G     GR  E + LF  M
Sbjct: 343 VAVGLVDMYAK---HGFLDDARKVFDFMPRRDLILWNALISG-CSHDGRHGEVLSLFHRM 398

Query: 380 IQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            +    +  N  T ASVLK+  +        QV+  A K G   D  V N LI  Y + G
Sbjct: 399 RKEGLDLDVNRTTLASVLKSTASSEAICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCG 458

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           +++ A K F+     +++S  TM+ A ++  + E A +L  ++   G+   ++  +SLL+
Sbjct: 459 QLDYAIKVFKESRSDDIISSTTMMTALSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLN 518

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             +S+ A  +G+Q+HA +IK  F S+    NAL+  Y++C ++E A   F  + +R ++S
Sbjct: 519 ACTSLSAYEQGKQVHAHLIKRQFTSDVFAGNALVYAYAKCGSIEDADMAFSGLPERGIVS 578

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W++MI G A+HG   RAL++F++ML +G+ PN IT  +VLSAC+HAGL+ +  K+F SM 
Sbjct: 579 WSAMIGGLAQHGHGKRALDLFHRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMK 638

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           +  GI +  EHYACM+D+LGR+G L +A+E + +MP  A+  VW   LGA RVH D ELG
Sbjct: 639 ETFGIDRTEEHYACMIDILGRAGKLEDAMELVNNMPFQANAAVWGALLGASRVHRDPELG 698

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           + AAE +   +P+    H+LL+N YASAG W+ +A +RK MK+ N+ KE   SW+E  +K
Sbjct: 699 RMAAEKLFTLEPEKSGTHVLLANTYASAGMWDEMAKVRKLMKDSNVKKEPAMSWVEIKDK 758

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           VH F VG+ SHP T +IY +L +L   + + GY+P+    LH+++  +K   L  HSE++
Sbjct: 759 VHTFIVGDKSHPMTRDIYGKLAELGDLMNKAGYVPNVEVDLHDVDRSEKELLLSHHSERL 818

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           AVAF LIST    PIRV KNLR+C DCH A KYIS +  REI++RD NRFHH  +G CSC
Sbjct: 819 AVAFALISTPSGAPIRVKKNLRICRDCHVAFKYISKIVSREIIIRDINRFHHFTNGTCSC 878

Query: 858 NDYW 861
            DYW
Sbjct: 879 GDYW 882



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 186/640 (29%), Positives = 314/640 (49%), Gaps = 27/640 (4%)

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
           SR+   G  +HS L +S L       N L++LYS+C   + A  +F  + +    VSWSS
Sbjct: 17  SRSLFAGAHLHSHLLKSGLLAG--FSNHLLTLYSRCRLPSAARAVFDEIPDPCH-VSWSS 73

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           ++++Y N G   DA+  F  M   G   NE+    V++ C+   +V  G  ++   +   
Sbjct: 74  LVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLK-CA--PDVRFGAQVHALAVATR 130

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT----EKNTVGWTLMITRCTQLGCPRD 266
               DV V  AL+ ++  G   ++ A ++FD+      E+N V W  MI+   +     D
Sbjct: 131 LV-HDVFVANALVAVY-GGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAYVKNDQSGD 188

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           AI +F +M+ SG  P+ F  S VV+AC+      +G+Q+H   +RTG   DV    +LVD
Sbjct: 189 AIGVFREMVWSGERPNEFGFSCVVNACTGSRDLEAGRQVHGAVVRTGYEKDVFTANALVD 248

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MY+K    G ++ +  VF++M   +V+SW A I+G V + G D  A++L   M    + P
Sbjct: 249 MYSKL---GDIEMAATVFEKMPAADVVSWNAFISGCV-THGHDHRALELLLQMKSSGLVP 304

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N FT +SVLKAC      N+  Q++   VK     D+ V   L+ MYA+ G ++DARK F
Sbjct: 305 NVFTLSSVLKACAGAGAFNLGRQIHGFMVKAVADFDEFVAVGLVDMYAKHGFLDDARKVF 364

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG--VGTSAYTFASLLSGASSIGA 504
           + +  ++L+ +N ++   + +    +   L H +   G  +  +  T AS+L   +S  A
Sbjct: 365 DFMPRRDLILWNALISGCSHDGRHGEVLSLFHRMRKEGLDLDVNRTTLASVLKSTASSEA 424

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           I    Q+HA   K G  S+  + N LI  Y +C  ++ A +VFKE    ++IS T+M+T 
Sbjct: 425 ICHTRQVHALAEKIGLLSDSHVINGLIDSYWKCGQLDYAIKVFKESRSDDIISSTTMMTA 484

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
            ++      A+++F +ML  G++P+     ++L+AC+      +G K   +   +     
Sbjct: 485 LSQCDHGEDAIKLFVQMLRKGLEPDSFVLSSLLNACTSLSAYEQG-KQVHAHLIKRQFTS 543

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
            +     +V    + GS+ +A      +P    ++ W   +G    HG    GK A ++ 
Sbjct: 544 DVFAGNALVYAYAKCGSIEDADMAFSGLP-ERGIVSWSAMIGGLAQHGH---GKRALDLF 599

Query: 685 LEQ-DPQDPAAHILLSNLYASAGHWEYVANIRK---RMKE 720
               D      HI L+++ ++  H   V + +K    MKE
Sbjct: 600 HRMLDEGVAPNHITLTSVLSACNHAGLVDDAKKYFESMKE 639



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 83/329 (25%), Positives = 144/329 (43%), Gaps = 28/329 (8%)

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           T  S L   G          +++H +K G  L     N L+++Y+R      AR  F+ +
Sbjct: 6   TIGSALARFGTSRSLFAGAHLHSHLLKSG--LLAGFSNHLLTLYSRCRLPSAARAVFDEI 63

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            +   VS++++V AY+ N     A      +   GV  + +    +L  A  +     G 
Sbjct: 64  PDPCHVSWSSLVTAYSNNGMPRDALLAFRAMRGRGVPCNEFALPVVLKCAPDVRF---GA 120

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM----EDRNVISWTSMITGF 565
           Q+HA  + +    +  + NAL+++Y     V+ A ++F E      +RN +SW +MI+ +
Sbjct: 121 QVHALAVATRLVHDVFVANALVAVYGGFGMVDEARRMFDEYVGVGGERNAVSWNTMISAY 180

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            K+  +  A+ +F +M+  G +PN   +  V++AC+       G +   +    HG V R
Sbjct: 181 VKNDQSGDAIGVFREMVWSGERPNEFGFSCVVNACT-------GSRDLEAGRQVHGAVVR 233

Query: 626 MEHYA------CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
             +         +VD+  + G +  A      MP +ADV+ W  F+  C  HG       
Sbjct: 234 TGYEKDVFTANALVDMYSKLGDIEMAATVFEKMP-AADVVSWNAFISGCVTHGHDH---R 289

Query: 680 AAEMILEQDPQD--PAAHILLSNLYASAG 706
           A E++L+       P    L S L A AG
Sbjct: 290 ALELLLQMKSSGLVPNVFTLSSVLKACAG 318


>gi|356502293|ref|XP_003519954.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Glycine max]
          Length = 1047

 Score =  601 bits (1549), Expect = e-169,   Method: Compositional matrix adjust.
 Identities = 308/802 (38%), Positives = 490/802 (61%), Gaps = 7/802 (0%)

Query: 60   QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            ++A+     M   G +P    +S +L +C +   + +G+ +H L+ +      + + N+L
Sbjct: 253  EEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNAL 312

Query: 120  ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
            ++LYS+ G+   A ++F +M  +RD VS++S+IS    +G    A+ +F +M      P+
Sbjct: 313  VTLYSRLGNFIPAEQVFNAM-LQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPD 371

Query: 180  EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
                ++++ ACS+   + +G   + + +K G   SD+ +  AL+D++VK S D+++A++ 
Sbjct: 372  CVTVASLLSACSSVGALLVGKQFHSYAIKAG-MSSDIILEGALLDLYVKCS-DIKTAHEF 429

Query: 240  FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
            F     +N V W +M+     L    ++ ++F  M + G  P++FT   ++  CS L   
Sbjct: 430  FLSTETENVVLWNVMLVAYGLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAV 489

Query: 300  TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
              G+Q+H+  ++TG   +V V   L+DMYAK    G +D + K+F R+ + +V+SWTA+I
Sbjct: 490  DLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKL---GKLDHALKIFRRLKEKDVVSWTAMI 546

Query: 360  TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
             GY Q   +  EA+ LF +M    +  ++  FAS + AC  +   N  +Q++  A   G 
Sbjct: 547  AGYAQHE-KFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVSGY 605

Query: 420  ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
            + D  VGN+L+S+YAR G++ DA  AF+ +F K+ +S+N+++  +A++ + E+A  L  +
Sbjct: 606  SDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLFSQ 665

Query: 480  IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
            +   G   +++TF   +S A+++  +  G+QIHA IIK+G +S   + N LI++Y++C N
Sbjct: 666  MSKAGQEINSFTFGPAVSAAANVANVKLGKQIHAMIIKTGHDSETEVSNVLITLYAKCGN 725

Query: 540  VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
            ++ A + F EM ++N ISW +M+TG+++HG   +AL +F  M   G+ PN +T++ VLSA
Sbjct: 726  IDDAERQFFEMPEKNEISWNAMLTGYSQHGHGFKALSLFEDMKQLGVLPNHVTFVGVLSA 785

Query: 600  CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
            CSH GL+ EG K+F+SM + HG+V + EHYAC+VDLLGRSG L+ A  F+  MP+  D +
Sbjct: 786  CSHVGLVDEGIKYFQSMREVHGLVPKPEHYACVVDLLGRSGLLSRARRFVEEMPIQPDAM 845

Query: 660  VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
            V RT L AC VH + ++G+ AA  +LE +P+D A ++LLSN+YA  G W      R+ MK
Sbjct: 846  VCRTLLSACIVHKNIDIGEFAASHLLELEPKDSATYVLLSNMYAVTGKWGCRDRTRQMMK 905

Query: 720  ERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
            +R + KE G SWIE +N VH F  G+  HP   +IY  L  L     E GY+P TN +L+
Sbjct: 906  DRGVKKEPGRSWIEVNNSVHAFFAGDQKHPNVDKIYEYLRDLNELAAENGYIPQTNSLLN 965

Query: 780  ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
            + E  QK      HSEK+A+AFGL+S S S PI VFKNLRVCGDCH  IKY+S ++ R I
Sbjct: 966  DAERRQKGPTQIIHSEKLAIAFGLLSLSSSTPIHVFKNLRVCGDCHNWIKYVSKISDRVI 1025

Query: 840  VLRDSNRFHHIKDGKCSCNDYW 861
            V+RDS RFHH K G CSC DYW
Sbjct: 1026 VVRDSYRFHHFKGGICSCKDYW 1047



 Score =  306 bits (785), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 196/634 (30%), Positives = 333/634 (52%), Gaps = 17/634 (2%)

Query: 45  PLS--NRLIYHLNDGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLV 100
           PLS  N++++    G++   +  L   M Q+   PD  TY+ +L+ C      FH  + +
Sbjct: 133 PLSCWNKVLHRFVAGKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKI 192

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           H+       E +  + N LI LY K G LN A K+F  +  KRD VSW +M+S     G 
Sbjct: 193 HARTITHGYENSLFVCNPLIDLYFKNGFLNSAKKVFDGL-QKRDSVSWVAMLSGLSQSGC 251

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
           + +A+ +F +M   G  P  Y FS+V+ AC+  E   +G  ++G +LK G F  +  V  
Sbjct: 252 EEEAVLLFCQMHTSGVYPTPYIFSSVLSACTKVEFYKVGEQLHGLVLKQG-FSLETYVCN 310

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           AL+ ++ +   +   A +VF+ M +++ V +  +I+  +Q G    A+ LF  M L    
Sbjct: 311 ALVTLYSRLG-NFIPAEQVFNAMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLK 369

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD  T++ ++SACS +     GKQ HS+AI+ G++ D+ +  +L+D+Y KC+    +  +
Sbjct: 370 PDCVTVASLLSACSSVGALLVGKQFHSYAIKAGMSSDIILEGALLDLYVKCS---DIKTA 426

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRD--KEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            + F      NV+ W  ++  Y   G  D   E+ K+F+ M    + PN FT+ S+L+ C
Sbjct: 427 HEFFLSTETENVVLWNVMLVAY---GLLDNLNESFKIFTQMQMEGIEPNQFTYPSILRTC 483

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +L   ++ EQ++T  +K G   +  V + LI MYA+ G+++ A K F  L EK++VS+ 
Sbjct: 484 SSLRAVDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKLGKLDHALKIFRRLKEKDVVSWT 543

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  YA++    +A  L  E++D G+ +    FAS +S  + I A+ +G+QIHA+   S
Sbjct: 544 AMIAGYAQHEKFAEALNLFKEMQDQGIHSDNIGFASAISACAGIQALNQGQQIHAQACVS 603

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
           G+  +  + NAL+S+Y+RC  V  A+  F ++  ++ ISW S+I+GFA+ G    AL +F
Sbjct: 604 GYSDDLSVGNALVSLYARCGKVRDAYFAFDKIFSKDNISWNSLISGFAQSGHCEEALSLF 663

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
            +M   G + N  T+   +SA ++   +  G K   +M  + G     E    ++ L  +
Sbjct: 664 SQMSKAGQEINSFTFGPAVSAAANVANVKLG-KQIHAMIIKTGHDSETEVSNVLITLYAK 722

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            G++ +A      MP   + + W   L     HG
Sbjct: 723 CGNIDDAERQFFEMP-EKNEISWNAMLTGYSQHG 755



 Score =  282 bits (722), Expect = 5e-73,   Method: Compositional matrix adjust.
 Identities = 178/628 (28%), Positives = 325/628 (51%), Gaps = 22/628 (3%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ND      I  L LM ++G   +  TY  LL  C+ S  F  G  +H  + +       V
Sbjct: 45  NDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILKMGFCAEVV 104

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +   L+ LY   GDL+ A  +F  M   R +  W+ ++  +V        + +F  ML+ 
Sbjct: 105 LCERLMDLYIAFGDLDGAVTVFDEM-PVRPLSCWNKVLHRFVAGKMAGRVLGLFRRMLQE 163

Query: 175 GFCPNEYCFSAVIRACSN-------TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
              P+E  ++ V+R C          E +    I +G       +++ + V   LID++ 
Sbjct: 164 KVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHG-------YENSLFVCNPLIDLYF 216

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K    L SA KVFD + ++++V W  M++  +Q GC  +A+ LF  M  SG  P  +  S
Sbjct: 217 KNGF-LNSAKKVFDGLQKRDSVSWVAMLSGLSQSGCEEEAVLLFCQMHTSGVYPTPYIFS 275

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V+SAC+++E +  G+QLH   ++ G +L+  V  +LV +Y++    G+   + +VF+ M
Sbjct: 276 SVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRL---GNFIPAEQVFNAM 332

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
           L  + +S+ ++I+G  Q G  DK A++LF  M    + P+  T AS+L AC ++    V 
Sbjct: 333 LQRDEVSYNSLISGLSQQGYSDK-ALELFKKMCLDCLKPDCVTVASLLSACSSVGALLVG 391

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +Q +++A+K G + D  +  +L+ +Y +   ++ A + F S   +N+V +N M+ AY   
Sbjct: 392 KQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGLL 451

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
            N  ++F++  +++  G+  + +T+ S+L   SS+ A+  GEQIH +++K+GF+ N  + 
Sbjct: 452 DNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLGEQIHTQVLKTGFQFNVYVS 511

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           + LI MY++   ++ A ++F+ +++++V+SWT+MI G+A+H   A AL +F +M   GI 
Sbjct: 512 SVLIDMYAKLGKLDHALKIFRRLKEKDVVSWTAMIAGYAQHEKFAEALNLFKEMQDQGIH 571

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            + I + + +SAC+    +++G +   +     G    +     +V L  R G + +A  
Sbjct: 572 SDNIGFASAISACAGIQALNQG-QQIHAQACVSGYSDDLSVGNALVSLYARCGKVRDAY- 629

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTE 675
           F      S D + W + +      G  E
Sbjct: 630 FAFDKIFSKDNISWNSLISGFAQSGHCE 657



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 277/548 (50%), Gaps = 14/548 (2%)

Query: 149 SSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           +++  +Y N   + + I+    M E G   N   +  ++  C ++   + G  ++G +LK
Sbjct: 37  TALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSDGWKLHGKILK 96

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
            G F ++V +   L+D+++    DL+ A  VFD+M  +    W  ++ R          +
Sbjct: 97  MG-FCAEVVLCERLMDLYIAFG-DLDGAVTVFDEMPVRPLSCWNKVLHRFVAGKMAGRVL 154

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELEL-FTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
            LF  M+     PD  T +GV+  C   ++ F   +++H+  I  G    + V   L+D+
Sbjct: 155 GLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLFVCNPLIDL 214

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           Y K   +G ++ ++KVFD +   + +SW A+++G  QSG  ++EAV LF  M    V P 
Sbjct: 215 YFK---NGFLNSAKKVFDGLQKRDSVSWVAMLSGLSQSGC-EEEAVLLFCQMHTSGVYPT 270

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            + F+SVL AC  +    V EQ++   +K+G +L+  V N+L+++Y+R G    A + F 
Sbjct: 271 PYIFSSVLSACTKVEFYKVGEQLHGLVLKQGFSLETYVCNALVTLYSRLGNFIPAEQVFN 330

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
           ++ +++ VSYN+++   ++   S+KA EL  ++    +     T ASLLS  SS+GA+  
Sbjct: 331 AMLQRDEVSYNSLISGLSQQGYSDKALELFKKMCLDCLKPDCVTVASLLSACSSVGALLV 390

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+Q H+  IK+G  S+  +  AL+ +Y +C++++ A + F   E  NV+ W  M+  +  
Sbjct: 391 GKQFHSYAIKAGMSSDIILEGALLDLYVKCSDIKTAHEFFLSTETENVVLWNVMLVAYGL 450

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
                 + +IF +M  +GI+PN  TY ++L  CS    +  G +   +   + G    + 
Sbjct: 451 LDNLNESFKIFTQMQMEGIEPNQFTYPSILRTCSSLRAVDLG-EQIHTQVLKTGFQFNVY 509

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
             + ++D+  + G L  AL+  R +    DV+ W   +      G  +  K A  + L +
Sbjct: 510 VSSVLIDMYAKLGKLDHALKIFRRLK-EKDVVSWTAMIA-----GYAQHEKFAEALNLFK 563

Query: 688 DPQDPAAH 695
           + QD   H
Sbjct: 564 EMQDQGIH 571



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/228 (25%), Positives = 98/228 (42%), Gaps = 2/228 (0%)

Query: 449 LFEKNLVSYNTMVD-AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            F +  + +NT +  AY+ +         LH +E+ GV  ++ T+  LL G  S G    
Sbjct: 27  FFFQKFLEHNTALSYAYSNDEGEANGINFLHLMEERGVRANSQTYLWLLDGCLSSGWFSD 86

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G ++H +I+K GF +   +   L+ +Y    +++ A  VF EM  R +  W  ++  F  
Sbjct: 87  GWKLHGKILKMGFCAEVVLCERLMDLYIAFGDLDGAVTVFDEMPVRPLSCWNKVLHRFVA 146

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
              A R L +F +ML + +KP+  TY  VL  C    +     +   +    HG    + 
Sbjct: 147 GKMAGRVLGLFRRMLQEKVKPDERTYAGVLRGCGGGDVPFHCVEKIHARTITHGYENSLF 206

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
               ++DL  ++G L  A +    +    D + W   L      G  E
Sbjct: 207 VCNPLIDLYFKNGFLNSAKKVFDGLQ-KRDSVSWVAMLSGLSQSGCEE 253


>gi|328774755|gb|AEB39777.1| pentatricopeptide repeat protein 91 [Funaria hygrometrica]
          Length = 890

 Score =  600 bits (1546), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 315/841 (37%), Positives = 481/841 (57%), Gaps = 43/841 (5%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR+++AI  L ++ Q+G   + +TY  +++ C + R F  GK+VH  L    L  +  + 
Sbjct: 57  GRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGLAIDIYLG 116

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI+ YSK GD+    ++F+ M   RD+V+WSSMI++Y        A   F  M +   
Sbjct: 117 NSLINFYSKFGDVASVEQVFRRM-TLRDVVTWSSMIAAYAGNNHPAKAFDTFERMKDANI 175

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN   F ++++AC+N   +     I+  ++K    ++DV V  ALI M+ K G + L  
Sbjct: 176 EPNRITFLSILKACNNYSMLEKAREIHT-VVKASGMETDVAVATALITMYSKCGEISL-- 232

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++F KM E+N V WT +I    Q     +A  L+  M+ +G  P+  T   ++++C+ 
Sbjct: 233 ACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVSLLNSCNT 292

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
            E    G+++HS     GL  DV V  +L+ MY KC     + D+R+ FDRM   +V+SW
Sbjct: 293 PEALNRGRRIHSHISERGLETDVVVANALITMYCKCNC---IQDARETFDRMSKRDVISW 349

Query: 356 TAIITGYVQSGGRDKEAV----KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           +A+I GY QSG +DKE++    +L   M +  V PN  TF S+LKAC          Q++
Sbjct: 350 SAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQGRQIH 409

Query: 412 THAVKRG----RALDDCVGN---------------------------SLISMYARSGRME 440
               K G    R+L   + N                           SL++MY + G + 
Sbjct: 410 AEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKMENKNVVAWASLLTMYIKCGDLT 469

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A K F  +  +N+VS+N M+  YA++ +  K FELL  ++  G      T  S+L    
Sbjct: 470 SAEKVFSEMSTRNVVSWNLMIAGYAQSGDIAKVFELLSSMKVEGFQPDRVTIISILEACG 529

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++ A+ +G+ +HA  +K G ES+  +  +LI MYS+C  V  A  VF ++ +R+ ++W +
Sbjct: 530 ALSALERGKLVHAEAVKLGLESDTVVATSLIGMYSKCGEVTEARTVFDKISNRDTVAWNA 589

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           M+ G+ +HG    A+++F +ML + + PN IT+ AV+SAC  AGL+ EG + FR M ++ 
Sbjct: 590 MLAGYGQHGIGPEAVDLFKRMLKERVPPNEITFTAVISACGRAGLVQEGREIFRIMQEDF 649

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            +    +HY CMVDLLGR+G L EA EFI+ MP   D+ VW   LGAC+ H + +L + A
Sbjct: 650 RMKPGKQHYGCMVDLLGRAGRLQEAEEFIQRMPCEPDISVWHALLGACKSHDNVQLAEWA 709

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A  IL  +P + + ++ LSN+YA AG W+    +RK M ++ L K+ G S IE D ++H 
Sbjct: 710 AHHILRLEPSNASVYVTLSNIYAQAGRWDDSTKVRKVMDDKGLKKDRGESSIEIDGRIHT 769

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F   + +HP+   I+AEL+ L  ++KE GY PD  FVLH+++E QK + L  HSEK+A+A
Sbjct: 770 FVAEDCAHPEIDSIHAELEMLTKEMKEAGYTPDMRFVLHDVDEVQKERALCHHSEKLAIA 829

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           +GL+ T    PIR+ KNLRVCGDCHTA K+IS +  REIV RD+NRFH+ K+G CSC D+
Sbjct: 830 YGLLKTPPGTPIRIMKNLRVCGDCHTATKFISKIRKREIVARDANRFHYFKNGTCSCGDF 889

Query: 861 W 861
           W
Sbjct: 890 W 890



 Score =  215 bits (547), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 221/416 (53%), Gaps = 11/416 (2%)

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           + R  + G  ++AI+L   +   G L +  T   ++  C++L  F  GK +H      GL
Sbjct: 50  VWRLCKAGRLKEAIQLLGIIKQRGLLVNSNTYGCIIEHCAKLRRFEDGKMVHKQLDELGL 109

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           A+D+ +G SL++ Y+K    G V    +VF RM   +V++W+++I  Y        +A  
Sbjct: 110 AIDIYLGNSLINFYSKF---GDVASVEQVFRRMTLRDVVTWSSMIAAYA-GNNHPAKAFD 165

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            F  M    + PN  TF S+LKAC N      A +++T     G   D  V  +LI+MY+
Sbjct: 166 TFERMKDANIEPNRITFLSILKACNNYSMLEKAREIHTVVKASGMETDVAVATALITMYS 225

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +  A + F+ + E+N+VS+  ++ A A++    +AFEL  ++   G+  +A TF S
Sbjct: 226 KCGEISLACEIFQKMKERNVVSWTAIIQANAQHRKLNEAFELYEKMLQAGISPNAVTFVS 285

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           LL+  ++  A+ +G +IH+ I + G E++  + NALI+MY +C  ++ A + F  M  R+
Sbjct: 286 LLNSCNTPEALNRGRRIHSHISERGLETDVVVANALITMYCKCNCIQDARETFDRMSKRD 345

Query: 555 VISWTSMITGFAKHGFAAR-----ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           VISW++MI G+A+ G+  +       ++  +M  +G+ PN +T++++L ACS  G + +G
Sbjct: 346 VISWSAMIAGYAQSGYQDKESLDEVFQLLERMRREGVFPNKVTFMSILKACSVHGALEQG 405

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
            +   +   + G          + ++  + GS+ EA +    M  + +V+ W + L
Sbjct: 406 -RQIHAEISKVGFESDRSLQTAIFNMYAKCGSIYEAEQVFSKME-NKNVVAWASLL 459


>gi|224107052|ref|XP_002333576.1| predicted protein [Populus trichocarpa]
 gi|222837227|gb|EEE75606.1| predicted protein [Populus trichocarpa]
          Length = 781

 Score =  598 bits (1542), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 312/772 (40%), Positives = 472/772 (61%), Gaps = 16/772 (2%)

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           FHL  L H        + +  + N+LI++Y + GD   A K+F  M + R+ V+W+ +IS
Sbjct: 22  FHLNVLKHGF------DSDLFLCNTLINVYVRIGDCVSARKLFDEMPD-RNGVTWACLIS 74

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE-NVAIGHIIYGFLLKCGYF 212
            Y   G   DA  +  EM+  GF PN + F + IRAC  +      G  ++G+ ++ G  
Sbjct: 75  GYTQNGMPEDACGVLKEMIFEGFLPNRFAFGSAIRACQESMLWRRKGRQVHGYAIRTGLN 134

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           D+ V VG  LI+M+ K   D++ A  VF  M +K++V W  MIT   Q  C  DA++ + 
Sbjct: 135 DAKVAVGNGLINMYAKCG-DIDHARSVFGLMVDKDSVSWNSMITGLDQNKCFEDAVKSYN 193

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M  +G +P  F L   +S+C+ L     G+Q H   I+ GL +DV V  +L+ +YA+ +
Sbjct: 194 SMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIKLGLDMDVSVSNTLLALYAETS 253

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
               + + +KVF  ML+ + +SW  +I     SG    EA+++F +M++   +PN  TF 
Sbjct: 254 ---RLAECQKVFSWMLERDQVSWNTVIGALADSGASVSEAIEVFLEMMRAGWSPNRVTFI 310

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           ++L    +L  S ++ Q++   +K     D+ + N+L++ Y +SG ME+  + F  + E+
Sbjct: 311 NLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENALLACYGKSGEMENCEEIFSRMSER 370

Query: 453 -NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            + VS+N+M+  Y  N    KA +L+  +   G     +TFA++LS  +++  +  G ++
Sbjct: 371 RDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCFTFATVLSACATVATLECGMEV 430

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA  I++  ES+  I +AL+ MYS+C  ++ A + F  M  RN+ SW SMI+G+A+HG  
Sbjct: 431 HACAIRACLESDVVIGSALVDMYSKCGRIDYASRFFNLMPVRNLYSWNSMISGYARHGHG 490

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             AL +F +M   G  P+ IT++ VLSACSH GL+ EG+++F+SM + +G+V R+EHY+C
Sbjct: 491 DNALRLFTRMKLSGQLPDHITFVGVLSACSHIGLVDEGFEYFKSMTEVYGLVPRVEHYSC 550

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA-CRVHG-DTELGKHAAEMILEQDP 689
           MVDLLGR+G L +   FI  MP+  ++L+WRT LGA CR +G  TELG+ AAEM+   DP
Sbjct: 551 MVDLLGRAGELDKIENFINKMPIKPNILIWRTVLGACCRGNGRKTELGRRAAEMLFNMDP 610

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
           Q+   ++LLSN+YAS G WE +A  R+ M+E  + KEAGCSW+   + VH F  G+ SHP
Sbjct: 611 QNAVNYVLLSNMYASGGKWEDMARTRRAMREAAVKKEAGCSWVTMKDGVHVFVAGDNSHP 670

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS 809
           +   IYA+L +L  KI++ GY+P   F L++LE E K + L  HSEK+AVAF +++ +  
Sbjct: 671 EKGLIYAKLKELDKKIRDAGYVPQIKFALYDLEPENKEELLSYHSEKLAVAF-VLTRNSG 729

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            PIR+ KNLRVCGDCH+A KYIS V  R IVLRDSNRFHH +DGKCSC DYW
Sbjct: 730 LPIRIMKNLRVCGDCHSAFKYISKVVDRSIVLRDSNRFHHFEDGKCSCRDYW 781



 Score =  155 bits (392), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 112/358 (31%), Positives = 190/358 (53%), Gaps = 12/358 (3%)

Query: 48  NRLIYHLNDGRV-QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I  L+  +  + A+ + + M + G  P        L SC       LG+  H    +
Sbjct: 173 NSMITGLDQNKCFEDAVKSYNSMRKTGLMPSNFALISALSSCASLGCILLGQQTHGEGIK 232

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV-DAI 165
             L+ +  + N+L++LY++   L E  K+F  M  +RD VSW+++I +  + G  V +AI
Sbjct: 233 LGLDMDVSVSNTLLALYAETSRLAECQKVFSWM-LERDQVSWNTVIGALADSGASVSEAI 291

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F+EM+  G+ PN   F  ++   S+     + H I+  +LK    D D  +  AL+  
Sbjct: 292 EVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKD-DNAIENALLAC 350

Query: 226 FVKGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           + K S ++E+  ++F +M+E ++ V W  MI+          A+ L   M+  G   D F
Sbjct: 351 YGK-SGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRLDCF 409

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T + V+SAC+ +     G ++H+ AIR  L  DV +G +LVDMY+KC   G +D + + F
Sbjct: 410 TFATVLSACATVATLECGMEVHACAIRACLESDVVIGSALVDMYSKC---GRIDYASRFF 466

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNL 401
           + M   N+ SW ++I+GY + G  D  A++LF+ M + GQ+ P+H TF  VL AC ++
Sbjct: 467 NLMPVRNLYSWNSMISGYARHGHGDN-ALRLFTRMKLSGQL-PDHITFVGVLSACSHI 522



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 104/380 (27%), Positives = 180/380 (47%), Gaps = 17/380 (4%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           V +AI     M + G  P+  T+  LL +        L   +H+L+ +  ++ ++ I N+
Sbjct: 287 VSEAIEVFLEMMRAGWSPNRVTFINLLATVSSLSTSKLSHQIHALILKYNVKDDNAIENA 346

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L++ Y K G++    +IF  M  +RD VSW+SMIS Y++      A+ +   M++ G   
Sbjct: 347 LLACYGKSGEMENCEEIFSRMSERRDEVSWNSMISGYIHNELLCKAMDLVWLMMQRGQRL 406

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           + + F+ V+ AC+    +  G  ++   ++    +SDV +G AL+DM+ K G +D  S +
Sbjct: 407 DCFTFATVLSACATVATLECGMEVHACAIR-ACLESDVVIGSALVDMYSKCGRIDYASRF 465

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
             F+ M  +N   W  MI+   + G   +A+RLF  M LSG LPD  T  GV+SACS + 
Sbjct: 466 --FNLMPVRNLYSWNSMISGYARHGHGDNALRLFTRMKLSGQLPDHITFVGVLSACSHIG 523

Query: 298 LFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSW 355
           L   G +   S     GL   V     +VD+  +    G +D      ++M +  N++ W
Sbjct: 524 LVDEGFEYFKSMTEVYGLVPRVEHYSCMVDLLGRA---GELDKIENFINKMPIKPNILIW 580

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMI---QGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
             ++    +  GR  E  +  ++M+     Q A N+   +++  + G   D        T
Sbjct: 581 RTVLGACCRGNGRKTELGRRAAEMLFNMDPQNAVNYVLLSNMYASGGKWED-----MART 635

Query: 413 HAVKRGRALDDCVGNSLISM 432
               R  A+    G S ++M
Sbjct: 636 RRAMREAAVKKEAGCSWVTM 655


>gi|147805537|emb|CAN74095.1| hypothetical protein VITISV_023708 [Vitis vinifera]
          Length = 906

 Score =  598 bits (1541), Expect = e-168,   Method: Compositional matrix adjust.
 Identities = 305/782 (39%), Positives = 476/782 (60%), Gaps = 34/782 (4%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S +LK+C   ++  +GK VH ++  S  E +  + N+L+ +Y+KC +  ++ ++F  +
Sbjct: 159 TFSSVLKACSIVKDLRIGKQVHGVVVVSGFEGDVFVANTLVVMYAKCDEFLDSKRLFDEI 218

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +R++VSW+++ S YV      +A+ +F EM+  G  PNE+  S+++ AC+   + + G
Sbjct: 219 -PERNVVSWNALFSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRG 277

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            II+G+L+K GY D D     AL+DM+ K   DL  A  VF+K+ + + V W  +I  C 
Sbjct: 278 KIIHGYLIKLGY-DWDPFSANALVDMYAKVG-DLADAISVFEKIKQPDIVSWNAVIAGCV 335

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                  A+ L   M                            +QLHS  ++  +  D+ 
Sbjct: 336 LHEHHEQALELLGQM---------------------------KRQLHSSLMKMDMESDLF 368

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V   LVDMY+KC +   ++D+R  F+ + + ++++W AII+GY Q    D EA+ LF +M
Sbjct: 369 VSVGLVDMYSKCDL---LEDARMAFNLLPEKDLIAWNAIISGYSQYW-EDMEALSLFVEM 424

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +  +  N  T +++LK+   L   +V  QV+  +VK G   D  V NSLI  Y +   +
Sbjct: 425 HKEGIGFNQTTLSTILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHV 484

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           EDA + FE     +LVS+ +M+ AYA+    E+A +L  E++D  +    +  +SLL+  
Sbjct: 485 EDAERIFEECTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNAC 544

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +++ A  +G+Q+H  I+K GF  +    N+L++MY++C +++ A + F E+ +R ++SW+
Sbjct: 545 ANLSAFEQGKQLHVHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELTERGIVSWS 604

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G A+HG   +AL++F +ML +G+ PN IT ++VL AC+HAGL++E   +F SM + 
Sbjct: 605 AMIGGLAQHGHGRQALQLFNQMLKEGVSPNHITLVSVLGACNHAGLVTEAKLYFESMEEL 664

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            G     EHYACM+DLLGR+G + EA+E +  MP  A+  VW   LGA R+H D ELG+ 
Sbjct: 665 FGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELGRR 724

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AAEM+   +P+    H+LL+N+YASAG WE VA +R+ M++  + KE G SWIE  +KV+
Sbjct: 725 AAEMLFILEPEKSGTHVLLANIYASAGKWENVAEVRRLMRDSKVKKEPGMSWIEVKDKVY 784

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
            F VG+ SH ++ EIYA+LD+L+  + + GY+P     LH++E+ +K   L+ HSEK+AV
Sbjct: 785 TFLVGDRSHYRSQEIYAKLDELSDLMDKAGYVPMVEIDLHDVEQSEKELLLYHHSEKLAV 844

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLI+T +  PIRV KNLRVC DCHTA KYI  +  REI++RD NRFHH KDG CSC D
Sbjct: 845 AFGLIATPQGAPIRVKKNLRVCVDCHTAFKYICKIVSREIIVRDINRFHHFKDGSCSCGD 904

Query: 860 YW 861
           YW
Sbjct: 905 YW 906



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 200/694 (28%), Positives = 347/694 (50%), Gaps = 57/694 (8%)

Query: 17  SFKPSNPSRQNLPPSSSPPFIAQ-PTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNH 75
           SF+     R +LP   +P  I   P  SE      I +L D               KGN 
Sbjct: 8   SFQKPLHQRLHLPFKPAPKLIQTVPQFSEDPQTTAILNLID---------------KGNF 52

Query: 76  -PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
            P   +YS LL  C  +++   G  +H+ +T+S L  +  I N LI+LYSKC     A K
Sbjct: 53  TPTSVSYSKLLSQCCTTKSLRPGLQIHAHITKSGLSDDPSIRNHLINLYSKCRXFGYARK 112

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +     ++ D+VSWS++IS Y   G    A+  F EM  LG   NE+ FS+V++ACS  +
Sbjct: 113 LVDE-SSEPDLVSWSALISGYAQNGLGGGALMAFHEMHLLGVKCNEFTFSSVLKACSIVK 171

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++ IG  ++G ++  G F+ DV V   L+ M+ K    L+S  ++FD++ E+N V W  +
Sbjct: 172 DLRIGKQVHGVVVVSG-FEGDVFVANTLVVMYAKCDEFLDSK-RLFDEIPERNVVSWNAL 229

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
            +   Q     +A+ LF +M+LSG  P+ F+LS +V+AC+ L   + GK +H + I+ G 
Sbjct: 230 FSCYVQXDFCGEAVGLFYEMVLSGIKPNEFSLSSMVNACTGLRDSSRGKIIHGYLIKLGY 289

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             D     +LVDMYAK    G + D+  VF+++   +++SW A+I G V      ++A++
Sbjct: 290 DWDPFSANALVDMYAKV---GDLADAISVFEKIKQPDIVSWNAVIAGCVLH-EHHEQALE 345

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           L   M                             Q+++  +K     D  V   L+ MY+
Sbjct: 346 LLGQM---------------------------KRQLHSSLMKMDMESDLFVSVGLVDMYS 378

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           +   +EDAR AF  L EK+L+++N ++  Y++     +A  L  E+   G+G +  T ++
Sbjct: 379 KCDLLEDARMAFNLLPEKDLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTTLST 438

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   + +  +    Q+H   +KSGF S+  + N+LI  Y +C++VE A ++F+E    +
Sbjct: 439 ILKSTAGLQVVHVCRQVHGLSVKSGFHSDIYVVNSLIDSYGKCSHVEDAERIFEECTIGD 498

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           ++S+TSMIT +A++G    AL++F +M    +KP+     ++L+AC++     +G K   
Sbjct: 499 LVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG-KQLH 557

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
               ++G V  +     +V++  + GS+ +A      +     ++ W   +G    HG  
Sbjct: 558 VHILKYGFVLDIFAGNSLVNMYAKCGSIDDAGRAFSELT-ERGIVSWSAMIGGLAQHGH- 615

Query: 675 ELGKHAAEMILEQDPQDPAA-HILLSNLYASAGH 707
             G+ A ++  +   +  +  HI L ++  +  H
Sbjct: 616 --GRQALQLFNQMLKEGVSPNHITLVSVLGACNH 647



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 235/437 (53%), Gaps = 34/437 (7%)

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFH-----LGKL---VHSLLTRSKLEPNSVILNSLISL 122
           +K   PD+ +++ ++  C+   +       LG++   +HS L +  +E +  +   L+ +
Sbjct: 317 EKIKQPDIVSWNAVIAGCVLHEHHEQALELLGQMKRQLHSSLMKMDMESDLFVSVGLVDM 376

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
           YSKC  L +A   F  +  K D+++W+++IS Y    + ++A+ +FVEM + G   N+  
Sbjct: 377 YSKCDLLEDARMAFNLLPEK-DLIAWNAIISGYSQYWEDMEALSLFVEMHKEGIGFNQTT 435

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            S ++++ +  + V +   ++G  +K G F SD+ V  +LID + K S  +E A ++F++
Sbjct: 436 LSTILKSTAGLQVVHVCRQVHGLSVKSG-FHSDIYVVNSLIDSYGKCS-HVEDAERIFEE 493

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
            T  + V +T MIT   Q G   +A++LFL+M      PDRF  S +++AC+ L  F  G
Sbjct: 494 CTIGDLVSFTSMITAYAQYGQGEEALKLFLEMQDMELKPDRFVCSSLLNACANLSAFEQG 553

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQLH   ++ G  LD+  G SLV+MYAKC   GS+DD+ + F  + +  ++SW+A+I G 
Sbjct: 554 KQLHVHILKYGFVLDIFAGNSLVNMYAKC---GSIDDAGRAFSELTERGIVSWSAMIGGL 610

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q  G  ++A++LF+ M++  V+PNH T  SVL AC +         + T A     +++
Sbjct: 611 AQH-GHGRQALQLFNQMLKEGVSPNHITLVSVLGACNH-------AGLVTEAKLYFESME 662

Query: 423 DCVG--------NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE-- 471
           +  G          +I +  R+G++ +A +    + FE N   +  ++ A   + + E  
Sbjct: 663 ELFGFKPMQEHYACMIDLLGRAGKINEAVELVNKMPFEANASVWGALLGAARIHKDVELG 722

Query: 472 -KAFELLHEIEDTGVGT 487
            +A E+L  +E    GT
Sbjct: 723 RRAAEMLFILEPEKSGT 739


>gi|168042957|ref|XP_001773953.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162674797|gb|EDQ61301.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 905

 Score =  596 bits (1537), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 307/810 (37%), Positives = 490/810 (60%), Gaps = 8/810 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G  +KA    + M   G  P+  TY  +L +C        GK +HS + ++  + +
Sbjct: 103 YAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENGKKIHSQIIKAGYQRD 162

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSL+S+Y KCGDL  A ++F  + + RD+VS+++M+  Y  +    + + +F +M 
Sbjct: 163 PRVQNSLLSMYGKCGDLPRARQVFAGI-SPRDVVSYNTMLGLYAQKAYVKECLGLFGQMS 221

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P++  +  ++ A +    +  G  I+   ++ G  +SD+ VG AL+ M V+   D
Sbjct: 222 SEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEG-LNSDIRVGTALVTMCVRCG-D 279

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++SA + F  + +++ V +  +I    Q G   +A   +  M   G   +R T   +++A
Sbjct: 280 VDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRMRSDGVALNRTTYLSILNA 339

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS  +   +GK +HS     G + DV +G +L+ MYA+C   G +  +R++F  M   ++
Sbjct: 340 CSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC---GDLPKARELFYTMPKRDL 396

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW AII GY +   R  EA++L+  M    V P   TF  +L AC N       + ++ 
Sbjct: 397 ISWNAIIAGYARREDRG-EAMRLYKQMQSEGVKPGRVTFLHLLSACANSSAYADGKMIHE 455

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             ++ G   +  + N+L++MY R G + +A+  FE    ++++S+N+M+  +A++ + E 
Sbjct: 456 DILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVISWNSMIAGHAQHGSYET 515

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A++L  E+++  +     TFAS+LSG  +  A+  G+QIH RI +SG + +  + NALI+
Sbjct: 516 AYKLFQEMQNEELEPDNITFASVLSGCKNPEALELGKQIHGRITESGLQLDVNLGNALIN 575

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP-NGI 591
           MY RC +++ A  VF  ++ R+V+SWT+MI G A  G   +A+E+F++M  +G +P +G 
Sbjct: 576 MYIRCGSLQDARNVFHSLQHRDVMSWTAMIGGCADQGEDMKAIELFWQMQNEGFRPPDGS 635

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+ ++LSAC+HAGL+ EG++ F SM  E+G++  +EHY C+V LLGR+    EA   I  
Sbjct: 636 TFTSILSACNHAGLVLEGYQIFSSMESEYGVLPTIEHYGCLVGLLGRARRFQEAETLINQ 695

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP   D  VW T LGACR+HG+  L +HAA   L+ + ++PA +ILLSN+YA+AG W+ V
Sbjct: 696 MPFPPDAAVWETLLGACRIHGNIALAEHAANNALKLNARNPAVYILLSNVYAAAGRWDDV 755

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           A IR+ M+ R + KE G SWIE DN +H+F   + SHP+T EIYAEL +L+++++E GY 
Sbjct: 756 AKIRRVMEGRGIRKEPGRSWIEVDNIIHEFIAADRSHPETAEIYAELKRLSVEMEEAGYF 815

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PDT  VLH+L +  +   L  HSE++A+A+GLI T    PIR+FKNLR+CGDCHTA K+I
Sbjct: 816 PDTQHVLHDLGKAHQETSLCTHSERLAIAYGLIKTPPGTPIRIFKNLRICGDCHTASKFI 875

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S + GREI+ RDSNRFH  K+GKCSC DYW
Sbjct: 876 SKLVGREIIARDSNRFHSFKNGKCSCEDYW 905



 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 186/597 (31%), Positives = 319/597 (53%), Gaps = 9/597 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  TY  LL++C R R     K +H+ +  + + P+  + N LI++Y KC  + +A+++F
Sbjct: 26  DRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQVF 85

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
           K M  +RD++SW+S+IS Y  +G +  A  +F EM   GF PN+  + +++ AC +   +
Sbjct: 86  KEM-PRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G  I+  ++K GY   D  V  +L+ M+ K   DL  A +VF  ++ ++ V +  M+ 
Sbjct: 145 ENGKKIHSQIIKAGY-QRDPRVQNSLLSMYGKCG-DLPRARQVFAGISPRDVVSYNTMLG 202

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              Q    ++ + LF  M   G  PD+ T   ++ A +   +   GK++H   +  GL  
Sbjct: 203 LYAQKAYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDEGKRIHKLTVEEGLNS 262

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           D+ VG +LV M  +C   G VD +++ F  + D +V+ + A+I    Q  G + EA + +
Sbjct: 263 DIRVGTALVTMCVRC---GDVDSAKQAFKGIADRDVVVYNALIAALAQH-GHNVEAFEQY 318

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M    VA N  T+ S+L AC         + +++H  + G + D  +GN+LISMYAR 
Sbjct: 319 YRMRSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARC 378

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G +  AR+ F ++ +++L+S+N ++  YA+  +  +A  L  +++  GV     TF  LL
Sbjct: 379 GDLPKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLL 438

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           S  ++  A   G+ IH  I++SG +SN  + NAL++MY RC ++  A  VF+  + R+VI
Sbjct: 439 SACANSSAYADGKMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQARDVI 498

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW SMI G A+HG    A ++F +M  + ++P+ IT+ +VLS C +   +  G K     
Sbjct: 499 SWNSMIAGHAQHGSYETAYKLFQEMQNEELEPDNITFASVLSGCKNPEALELG-KQIHGR 557

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             E G+   +     ++++  R GSL +A     S+    DV+ W   +G C   G+
Sbjct: 558 ITESGLQLDVNLGNALINMYIRCGSLQDARNVFHSLQ-HRDVMSWTAMIGGCADQGE 613



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/495 (28%), Positives = 269/495 (54%), Gaps = 12/495 (2%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           + A+++ C+    +     I+  +++ G    D+ +   LI+M+VK    L+ A++VF +
Sbjct: 30  YVALLQNCTRKRLLPEAKRIHAQMVEAG-VGPDIFLSNLLINMYVKCRSVLD-AHQVFKE 87

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M  ++ + W  +I+   Q G  + A +LF +M  +GF+P++ T   +++AC       +G
Sbjct: 88  MPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAELENG 147

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K++HS  I+ G   D  V  SL+ MY KC   G +  +R+VF  +   +V+S+  ++  Y
Sbjct: 148 KKIHSQIIKAGYQRDPRVQNSLLSMYGKC---GDLPRARQVFAGISPRDVVSYNTMLGLY 204

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA--CGNLLDSNVAEQVYTHAVKRGRA 420
            Q     KE + LF  M    ++P+  T+ ++L A    ++LD    ++++   V+ G  
Sbjct: 205 AQK-AYVKECLGLFGQMSSEGISPDKVTYINLLDAFTTPSMLDE--GKRIHKLTVEEGLN 261

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            D  VG +L++M  R G ++ A++AF+ + ++++V YN ++ A A++ ++ +AFE  + +
Sbjct: 262 SDIRVGTALVTMCVRCGDVDSAKQAFKGIADRDVVVYNALIAALAQHGHNVEAFEQYYRM 321

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              GV  +  T+ S+L+  S+  A+  G+ IH+ I + G  S+  I NALISMY+RC ++
Sbjct: 322 RSDGVALNRTTYLSILNACSTSKALEAGKLIHSHISEDGHSSDVQIGNALISMYARCGDL 381

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A ++F  M  R++ISW ++I G+A+      A+ ++ +M ++G+KP  +T++ +LSAC
Sbjct: 382 PKARELFYTMPKRDLISWNAIIAGYARREDRGEAMRLYKQMQSEGVKPGRVTFLHLLSAC 441

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           +++   ++G K         GI         ++++  R GSL EA         + DV+ 
Sbjct: 442 ANSSAYADG-KMIHEDILRSGIKSNGHLANALMNMYRRCGSLMEAQNVFEGTQ-ARDVIS 499

Query: 661 WRTFLGACRVHGDTE 675
           W + +     HG  E
Sbjct: 500 WNSMIAGHAQHGSYE 514



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 58/180 (32%), Positives = 98/180 (54%), Gaps = 2/180 (1%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T   T+ +LL   +    + + ++IHA+++++G   +  + N LI+MY +C +V  A QV
Sbjct: 25  TDRATYVALLQNCTRKRLLPEAKRIHAQMVEAGVGPDIFLSNLLINMYVKCRSVLDAHQV 84

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           FKEM  R+VISW S+I+ +A+ GF  +A ++F +M   G  PN ITYI++L+AC     +
Sbjct: 85  FKEMPRRDVISWNSLISCYAQQGFKKKAFQLFEEMQNAGFIPNKITYISILTACYSPAEL 144

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             G K   S   + G  +       ++ + G+ G L  A +    +    DV+ + T LG
Sbjct: 145 ENG-KKIHSQIIKAGYQRDPRVQNSLLSMYGKCGDLPRARQVFAGIS-PRDVVSYNTMLG 202


>gi|359482718|ref|XP_002263673.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Vitis vinifera]
          Length = 1088

 Score =  595 bits (1535), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 306/842 (36%), Positives = 502/842 (59%), Gaps = 51/842 (6%)

Query: 60   QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            ++A    D M + G  PD  T++  L+ C   R+   GK VHS L     + ++ + N+L
Sbjct: 258  EEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNAL 317

Query: 120  ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
            I +Y+KC D     K+F  MG +R+ V+W+S+IS+    G   DA+ +F+ M E G+  N
Sbjct: 318  IDMYAKCDDEESCLKVFDEMG-ERNQVTWNSIISAEAQFGHFNDALVLFLRMQESGYKSN 376

Query: 180  EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
             +   +++ A +   ++  G  ++G L++    +SD+ +G AL+DM+ K  + +E A++V
Sbjct: 377  RFNLGSILMASAGLADIGKGRELHGHLVR-NLLNSDIILGSALVDMYSKCGM-VEEAHQV 434

Query: 240  FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELEL 298
            F  + E+N V +  ++    Q G   +A+ L+ DM    G  PD+FT + +++ C+    
Sbjct: 435  FRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRN 494

Query: 299  FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
               G+Q+H+  IR  +  ++ V   LV MY++C   G ++ ++++F+RM + N  SW ++
Sbjct: 495  DNQGRQIHAHLIRANITKNIIVETELVHMYSEC---GRLNYAKEIFNRMAERNAYSWNSM 551

Query: 359  ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS-------------- 404
            I GY Q  G  +EA++LF  M    + P+ F+ +S+L +C +L DS              
Sbjct: 552  IEGY-QQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNT 610

Query: 405  ---------------------NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
                                 + A +VY   +K+    D  + N ++S +  SGR  DA+
Sbjct: 611  MEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKK----DVILNNVMVSAFVNSGRANDAK 666

Query: 444  KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
              F+ + ++N   +N+++  YA     +++F    E+ ++ +     T  ++++  SS+ 
Sbjct: 667  NLFDQMEQRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLP 726

Query: 504  AIGKGEQIHARIIKSGFESNHCIY-NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            A+  G+Q+H+ IIK GF +   +   AL+ MYS+C  +  A  VF  M  +N++SW +MI
Sbjct: 727  ALEHGDQLHSLIIKKGFVNCSVVLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMI 786

Query: 563  TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            +G++KHG +  AL ++ +M   G+ PN +T++A+LSACSH GL+ EG + F SM +++ I
Sbjct: 787  SGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNI 846

Query: 623  VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              + EHY CMVDLLGR+G L +A EF+  MP+  +V  W   LGACRVH D ++G+ AA+
Sbjct: 847  EAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKDMDMGRLAAQ 906

Query: 683  MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
             + E DPQ+P  ++++SN+YA+AG W+ V +IR+ MK + + K+ G SWIE ++++  FH
Sbjct: 907  RLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIEINSEIQIFH 966

Query: 743  VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH---ELEEEQKVQYLFQHSEKIAV 799
             G  +HPKT EIY  L  L L+ K  GY+PDT+F+L    +++EE++ +YL QHSE++A+
Sbjct: 967  AGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYLLQHSERLAL 1026

Query: 800  AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
            + GLIS  K   IRVFKNLR+CGDCHTA K+IS +TGR I+ RD+NRFHH ++GKCSC D
Sbjct: 1027 SLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHFENGKCSCGD 1086

Query: 860  YW 861
            YW
Sbjct: 1087 YW 1088



 Score =  296 bits (759), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 177/637 (27%), Positives = 325/637 (51%), Gaps = 42/637 (6%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   GN  D  T+  ++K+CI   +    + + S + ++ L  N  +  +L+  Y++ G 
Sbjct: 166 MRGSGNFSDKFTFPSVIKACIAMEDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARFGW 225

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +++A      +     +V+W+++I+ YV      +A  +F  ML++G CP+ + F++ +R
Sbjct: 226 MDDAVTSLDEI-EGTSVVTWNAVIAGYVKILSWEEAWGIFDRMLKIGVCPDNFTFASALR 284

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            C    +   G  ++  L+ CG F  D  VG ALIDM+ K   D ES  KVFD+M E+N 
Sbjct: 285 VCGALRSRDGGKQVHSKLIACG-FKGDTFVGNALIDMYAKCD-DEESCLKVFDEMGERNQ 342

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  +I+   Q G   DA+ LFL M  SG+  +RF L  ++ A + L     G++LH  
Sbjct: 343 VTWNSIISAEAQFGHFNDALVLFLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGH 402

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +R  L  D+ +G +LVDMY+KC   G V+++ +VF  +L+ N +S+ A++ GYVQ  G+
Sbjct: 403 LVRNLLNSDIILGSALVDMYSKC---GMVEEAHQVFRSLLERNEVSYNALLAGYVQE-GK 458

Query: 369 DKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            +EA++L+ DM  +  + P+ FTF ++L  C N  + N   Q++ H ++     +  V  
Sbjct: 459 AEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKNIIVET 518

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
            L+ MY+  GR+  A++ F  + E+N  S+N+M++ Y +N  +++A  L  +++  G+  
Sbjct: 519 ELVHMYSECGRLNYAKEIFNRMAERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKP 578

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV- 546
             ++ +S+LS   S+    KG ++H  I+++  E    +   L+ MY++C +++ A++V 
Sbjct: 579 DCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVY 638

Query: 547 ------------------------------FKEMEDRNVISWTSMITGFAKHGFAARALE 576
                                         F +ME RN   W S++ G+A  G    +  
Sbjct: 639 DQTIKKDVILNNVMVSAFVNSGRANDAKNLFDQMEQRNTALWNSILAGYANKGLKKESFN 698

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ-RMEHYACMVDL 635
            F +ML   I+ + +T + +++ CS    +  G     S+  + G V   +     +VD+
Sbjct: 699 HFLEMLESDIEYDVLTMVTIVNLCSSLPALEHG-DQLHSLIIKKGFVNCSVVLETALVDM 757

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
             + G++T+A     +M    +++ W   +     HG
Sbjct: 758 YSKCGAITKARTVFDNMN-GKNIVSWNAMISGYSKHG 793



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 174/595 (29%), Positives = 311/595 (52%), Gaps = 21/595 (3%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG---DLNEANKIFK 137
           YS L++ CI S +F  GK +H+ +  +   P++ ++  ++ LY++ G   DL  A K+F+
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M  +R++ +W++MI +Y      ++ + ++  M   G   +++ F +VI+AC   E++ 
Sbjct: 134 EMP-ERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAMEDMG 192

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
               +   ++K G  + ++ VG AL+D + +    ++ A    D++   + V W  +I  
Sbjct: 193 GVRQLQSSVVKAG-LNCNLFVGGALVDGYARFGW-MDDAVTSLDEIEGTSVVTWNAVIAG 250

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             ++    +A  +F  M+  G  PD FT +  +  C  L     GKQ+HS  I  G   D
Sbjct: 251 YVKILSWEEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGD 310

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             VG +L+DMYAKC  + S     KVFD M + N ++W +II+   Q G  + +A+ LF 
Sbjct: 311 TFVGNALIDMYAKCDDEESC---LKVFDEMGERNQVTWNSIISAEAQFGHFN-DALVLFL 366

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M +     N F   S+L A   L D     +++ H V+     D  +G++L+ MY++ G
Sbjct: 367 RMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSKCG 426

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE-DTGVGTSAYTFASLL 496
            +E+A + F SL E+N VSYN ++  Y +   +E+A EL H+++ + G+    +TF +LL
Sbjct: 427 MVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLL 486

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           +  ++     +G QIHA +I++    N  +   L+ MYS C  +  A ++F  M +RN  
Sbjct: 487 TLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERNAY 546

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH---- 612
           SW SMI G+ ++G    AL +F +M  +GIKP+  +  ++LS+C       +G +     
Sbjct: 547 SWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFI 606

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
            R+  +E GI+Q       +VD+  + GS+  A + +    +  DV++    + A
Sbjct: 607 VRNTMEEEGILQ-----VVLVDMYAKCGSMDYAWK-VYDQTIKKDVILNNVMVSA 655



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 161/583 (27%), Positives = 297/583 (50%), Gaps = 42/583 (7%)

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV--DLESA 236
           N   +S++I+ C ++ +   G  I+  ++  GY + D  +   ++ ++ +     DL  A
Sbjct: 70  NPLPYSSLIQDCIDSNSFQRGKSIHTQMISNGY-NPDAYLMTKILMLYARSGCLDDLCYA 128

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+F++M E+N   W  MI    ++    + +RL+  M  SG   D+FT   V+ AC  +
Sbjct: 129 RKLFEEMPERNLTAWNTMILAYARVDDYMEVLRLYGRMRGSGNFSDKFTFPSVIKACIAM 188

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E     +QL S  ++ GL  ++ VG +LVD YA+    G +DD+    D +   +V++W 
Sbjct: 189 EDMGGVRQLQSSVVKAGLNCNLFVGGALVDGYARF---GWMDDAVTSLDEIEGTSVVTWN 245

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I GYV+    + EA  +F  M++  V P++FTFAS L+ CG L   +  +QV++  + 
Sbjct: 246 AVIAGYVKILSWE-EAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIA 304

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   D  VGN+LI MYA+    E   K F+ + E+N V++N+++ A A+  +   A  L
Sbjct: 305 CGFKGDTFVGNALIDMYAKCDDEESCLKVFDEMGERNQVTWNSIISAEAQFGHFNDALVL 364

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
              ++++G  ++ +   S+L  ++ +  IGKG ++H  ++++   S+  + +AL+ MYS+
Sbjct: 365 FLRMQESGYKSNRFNLGSILMASAGLADIGKGRELHGHLVRNLLNSDIILGSALVDMYSK 424

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIA 595
           C  VE A QVF+ + +RN +S+ +++ G+ + G A  ALE+++ M + DGI+P+  T+  
Sbjct: 425 CGMVEEAHQVFRSLLERNEVSYNALLAGYVQEGKAEEALELYHDMQSEDGIQPDQFTFTT 484

Query: 596 VLSACS-----------HAGLISEGW-------KHFRSMYDEHG-------IVQRMEH-- 628
           +L+ C+           HA LI                MY E G       I  RM    
Sbjct: 485 LLTLCANQRNDNQGRQIHAHLIRANITKNIIVETELVHMYSECGRLNYAKEIFNRMAERN 544

Query: 629 ---YACMVDLLGRSGSLTEALEFIRSMPLSA---DVLVWRTFLGACRVHGDTELGKHAAE 682
              +  M++   ++G   EAL   + M L+    D     + L +C    D++ G+    
Sbjct: 545 AYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHN 604

Query: 683 MILEQDPQDPAA-HILLSNLYASAGHWEYVANIRKRMKERNLI 724
            I+    ++     ++L ++YA  G  +Y   +  +  ++++I
Sbjct: 605 FIVRNTMEEEGILQVVLVDMYAKCGSMDYAWKVYDQTIKKDVI 647



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 217/434 (50%), Gaps = 47/434 (10%)

Query: 53  HLNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           ++ +G+ ++A+    D+ ++ G  PD  T++ LL  C   RN + G+ +H+ L R+ +  
Sbjct: 453 YVQEGKAEEALELYHDMQSEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITK 512

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N ++   L+ +YS+CG LN A +IF  M  +R+  SW+SMI  Y   G+  +A+ +F +M
Sbjct: 513 NIIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQEALRLFKQM 571

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-------------------KCGYF 212
              G  P+ +  S+++ +C +  +   G  ++ F++                   KCG  
Sbjct: 572 QLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAKCGSM 631

Query: 213 D-----------SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           D            DV +   ++  FV  S     A  +FD+M ++NT  W  ++      
Sbjct: 632 DYAWKVYDQTIKKDVILNNVMVSAFVN-SGRANDAKNLFDQMEQRNTALWNSILAGYANK 690

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA-LDVCV 320
           G  +++   FL+M+ S    D  T+  +V+ CS L     G QLHS  I+ G     V +
Sbjct: 691 GLKKESFNHFLEMLESDIEYDVLTMVTIVNLCSSLPALEHGDQLHSLIIKKGFVNCSVVL 750

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +LVDMY+KC   G++  +R VFD M   N++SW A+I+GY + G   KEA+ L+ +M 
Sbjct: 751 ETALVDMYSKC---GAITKARTVFDNMNGKNIVSWNAMISGYSKHGC-SKEALILYEEMP 806

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYT-----HAVKRGRALDDCVGNSLISMYAR 435
           +  + PN  TF ++L AC +        +++T     + ++       C    ++ +  R
Sbjct: 807 KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTC----MVDLLGR 862

Query: 436 SGRMEDARKAFESL 449
           +GR+EDA++  E +
Sbjct: 863 AGRLEDAKEFVEKM 876


>gi|168017714|ref|XP_001761392.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162687398|gb|EDQ73781.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 833

 Score =  595 bits (1534), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 308/797 (38%), Positives = 479/797 (60%), Gaps = 7/797 (0%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            L  + + GNH D  TY  L + C   R+  LGK V   + +   + N   LN+LI LYS
Sbjct: 44  VLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIKLYS 103

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
            CG++ EA +IF S+ NK  +V+W+++I+ Y   G   +A  +F +M++ G  P+   F 
Sbjct: 104 ICGNVTEARQIFDSVENK-TVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIITFL 162

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +V+ ACS+   +  G  ++  ++  G F SD  +G AL+ M+VKG   ++ A +VFD + 
Sbjct: 163 SVLDACSSPAGLNWGKEVHAQVVTAG-FVSDFRIGTALVSMYVKGG-SMDDARQVFDGLH 220

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++   + +M+    + G    A  LF  M   G  P++ +   ++  C   E    GK 
Sbjct: 221 IRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGLKPNKISFLSILDGCWTPEALAWGKA 280

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  +  GL  D+ V  SL+ MY  C   GS++ +R+VFD M   +V+SWT +I GY +
Sbjct: 281 VHAQCMNAGLVDDIRVATSLIRMYTTC---GSIEGARRVFDNMKVRDVVSWTVMIEGYAE 337

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G  + +A  LF+ M +  + P+  T+  ++ AC    + N A ++++     G   D  
Sbjct: 338 NGNIE-DAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTDLL 396

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V  +L+ MYA+ G ++DAR+ F+++  +++VS++ M+ AY +N    +AFE  H ++ + 
Sbjct: 397 VSTALVHMYAKCGAIKDARQVFDAMPRRDVVSWSAMIGAYVENGYGTEAFETFHLMKRSN 456

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +     T+ +LL+    +GA+  G +I+ + IK+   S+  + NALI M ++  +VE A 
Sbjct: 457 IEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLVSHVPLGNALIIMNAKHGSVERAR 516

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            +F  M  R+VI+W +MI G++ HG A  AL +F +ML +  +PN +T++ VLSACS AG
Sbjct: 517 YIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLSACSRAG 576

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            + EG + F  + +  GIV  ++ Y CMVDLLGR+G L EA   I+SMP+     +W + 
Sbjct: 577 FVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRAGELDEAELLIKSMPVKPTSSIWSSL 636

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           L ACR+HG+ ++ + AAE  L  DP D A ++ LS++YA+AG WE VA +RK M+ R + 
Sbjct: 637 LVACRIHGNLDVAERAAERCLMIDPYDGAVYVQLSHMYAAAGMWENVAKVRKVMESRGIR 696

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           KE GC+WIE   KVH F V + SHP   EIYAEL +L   IK  GY+P T  VLH++ E+
Sbjct: 697 KEQGCTWIEVAGKVHTFVVEDRSHPLVGEIYAELARLMNAIKREGYIPITQNVLHDVGEQ 756

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           QK + +  HSEK+A+A+G++S     PIR++KNLRVC DCH+A K+IS VTGREI+ RD+
Sbjct: 757 QKEEAISYHSEKLAIAYGVLSLPSGTPIRIYKNLRVCSDCHSASKFISKVTGREIIARDA 816

Query: 845 NRFHHIKDGKCSCNDYW 861
           +RFHH KDG CSC DYW
Sbjct: 817 SRFHHFKDGVCSCGDYW 833



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 170/609 (27%), Positives = 302/609 (49%), Gaps = 26/609 (4%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G V++A      M  +G  P + T+  +L +C      + GK VH+ +  +    +  I 
Sbjct: 137 GHVKEAFALFRQMVDEGLEPSIITFLSVLDACSSPAGLNWGKEVHAQVVTAGFVSDFRIG 196

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+S+Y K G +++A ++F  + + RD+ +++ M+  Y   G    A  +F  M ++G 
Sbjct: 197 TALVSMYVKGGSMDDARQVFDGL-HIRDVSTFNVMVGGYAKSGDWEKAFELFYRMQQVGL 255

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN+  F +++  C   E +A G  ++   +  G  D D+ V  +LI M+   GS+  E 
Sbjct: 256 KPNKISFLSILDGCWTPEALAWGKAVHAQCMNAGLVD-DIRVATSLIRMYTTCGSI--EG 312

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD M  ++ V WT+MI    + G   DA  LF  M   G  PDR T   +++AC+ 
Sbjct: 313 ARRVFDNMKVRDVVSWTVMIEGYAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAI 372

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                  +++HS     G   D+ V  +LV MYAKC   G++ D+R+VFD M   +V+SW
Sbjct: 373 SANLNHAREIHSQVDIAGFGTDLLVSTALVHMYAKC---GAIKDARQVFDAMPRRDVVSW 429

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           +A+I  YV++ G   EA + F  M +  + P+  T+ ++L ACG+L   +V  ++YT A+
Sbjct: 430 SAMIGAYVEN-GYGTEAFETFHLMKRSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAI 488

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K        +GN+LI M A+ G +E AR  F+++  ++++++N M+  Y+ + N+ +A  
Sbjct: 489 KADLVSHVPLGNALIIMNAKHGSVERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALY 548

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMY 534
           L   +       ++ TF  +LS  S  G + +G +    +++  G      +Y  ++ + 
Sbjct: 549 LFDRMLKERFRPNSVTFVGVLSACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLL 608

Query: 535 SRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG---FAARALEIFYKMLADGIKP-N 589
            R   ++ A  + K M  +   S W+S++     HG    A RA E   + L   I P +
Sbjct: 609 GRAGELDEAELLIKSMPVKPTSSIWSSLLVACRIHGNLDVAERAAE---RCLM--IDPYD 663

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
           G  Y+ +    + AG+  E     R + +  GI  R E     +++ G+  +        
Sbjct: 664 GAVYVQLSHMYAAAGMW-ENVAKVRKVMESRGI--RKEQGCTWIEVAGKVHTFVVE---D 717

Query: 650 RSMPLSADV 658
           RS PL  ++
Sbjct: 718 RSHPLVGEI 726



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/297 (28%), Positives = 148/297 (49%), Gaps = 9/297 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G ++ A      M ++G  PD  TY  ++ +C  S N +  + +HS +  +    +
Sbjct: 335 YAENGNIEDAFGLFATMQEEGIQPDRITYMHIMNACAISANLNHAREIHSQVDIAGFGTD 394

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++  +L+ +Y+KCG + +A ++F +M  +RD+VSWS+MI +YV  G   +A   F  M 
Sbjct: 395 LLVSTALVHMYAKCGAIKDARQVFDAM-PRRDVVSWSAMIGAYVENGYGTEAFETFHLMK 453

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
                P+   +  ++ AC +   + +G  IY   +K     S V +G ALI M  K GSV
Sbjct: 454 RSNIEPDGVTYINLLNACGHLGALDVGMEIYTQAIKADLV-SHVPLGNALIIMNAKHGSV 512

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
             E A  +FD M  ++ + W  MI   +  G  R+A+ LF  M+   F P+  T  GV+S
Sbjct: 513 --ERARYIFDTMVRRDVITWNAMIGGYSLHGNAREALYLFDRMLKERFRPNSVTFVGVLS 570

Query: 292 ACSELELFTSGKQLHSWAIR-TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           ACS       G++  ++ +   G+   V +   +VD+  +    G +D++  +   M
Sbjct: 571 ACSRAGFVDEGRRFFTYLLEGRGIVPTVKLYGCMVDLLGRA---GELDEAELLIKSM 624



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 101/203 (49%), Gaps = 2/203 (0%)

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++L  + + G    + T+  L    + +     G+Q+   II+ G + N    N LI 
Sbjct: 41  ANDVLQRLGEGGNHIDSRTYVKLFQRCTELRDAALGKQVRDHIIQGGRQLNIYELNTLIK 100

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +YS C NV  A Q+F  +E++ V++W ++I G+A+ G    A  +F +M+ +G++P+ IT
Sbjct: 101 LYSICGNVTEARQIFDSVENKTVVTWNALIAGYAQVGHVKEAFALFRQMVDEGLEPSIIT 160

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +++VL ACS    ++ G K   +     G V        +V +  + GS+ +A +    +
Sbjct: 161 FLSVLDACSSPAGLNWG-KEVHAQVVTAGFVSDFRIGTALVSMYVKGGSMDDARQVFDGL 219

Query: 653 PLSADVLVWRTFLGACRVHGDTE 675
            +  DV  +   +G     GD E
Sbjct: 220 HIR-DVSTFNVMVGGYAKSGDWE 241


>gi|449485624|ref|XP_004157227.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g57430, chloroplastic-like [Cucumis sativus]
          Length = 863

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 312/782 (39%), Positives = 460/782 (58%), Gaps = 47/782 (6%)

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG-------------------- 159
           ++LYSKC     A K+     ++ D+VSWS++IS YV  G                    
Sbjct: 89  VNLYSKCQCFRVARKLVID-SSEPDLVSWSALISGYVQNGRGEEALLTYYEMYLLGAKGN 147

Query: 160 --------------------KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
                               KQ+  + +  EM+  G  PNE+  S V+ AC+  E+   G
Sbjct: 148 EFTFSSVLKGCSLTRNLELGKQIHRVALVTEMISTGISPNEFSLSTVLNACAGLEDENYG 207

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             ++G+L+K GY DSD     AL+DM+ K     E+A  VF ++ + + V W  +I  C 
Sbjct: 208 MKVHGYLIKLGY-DSDPFSANALLDMYAKSGCP-EAAIAVFYEIPKPDIVSWNAVIAGCV 265

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                  A++L   M      P  FTLS  + AC+ + L   G+QLHS  ++  +  D  
Sbjct: 266 LHEKNDLALKLLGKMGSYRVAPSMFTLSSALKACAAIGLVKLGRQLHSALMKMDMEPDSF 325

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG  L+DMY+KC   G + D+R VFD M   +V+ W +II+GY  + G D EA+ LF++M
Sbjct: 326 VGVGLIDMYSKC---GLLQDARMVFDLMPXKDVIVWNSIISGY-SNCGYDIEAMSLFTNM 381

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +  +  N  T +++LK+      +   EQV+T ++K G   D  V NSL+  Y +   +
Sbjct: 382 YKEGLEFNQTTLSTILKSTAGSQANGFCEQVHTISIKSGYQYDGYVANSLLDSYGKCCLL 441

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           EDA K FE    ++LV+Y +M+ AY++    E+A ++   ++D  +   A+ F+SL +  
Sbjct: 442 EDAAKVFEVCPAEDLVAYTSMITAYSQYGLGEEALKMYLRMQDRDIKPDAFIFSSLFNAC 501

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +++ A  +G+QIH  ++K G  S+    N+L++MY++C +++ A  +F E+  R ++SW+
Sbjct: 502 ANLSAYEQGKQIHVHVLKCGLLSDVFAGNSLVNMYAKCGSIDDASCIFNEISWRGIVSWS 561

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G A+HG   +AL++FY+ML +GI PN IT ++VLSAC+HAGL++E  + F  M   
Sbjct: 562 AMIGGLAQHGHGRKALQLFYQMLKNGILPNHITLVSVLSACNHAGLVTEARRFFGLMEKL 621

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            GI    EHYACMVD+LGR G L EA+  ++ MP  A   VW   LGA R+H + ELG+H
Sbjct: 622 FGITPTQEHYACMVDILGRVGRLDEAMVLVKEMPFQASAAVWGALLGAARIHKNIELGRH 681

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AAEM+L  +P+    HILL+N+YAS G W+ VA +R+ MK   + KE G SWIE  +KV+
Sbjct: 682 AAEMLLTLEPEKSGTHILLANIYASTGMWDNVAKVRRSMKNSLVKKEPGMSWIELKDKVY 741

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
            F VG+ SHP++ EIY +LD L  ++   GY+P     LH++E+ +K Q L+ HSEK+AV
Sbjct: 742 TFIVGDRSHPRSKEIYVKLDDLRERLTSAGYVPMIETDLHDVEQIEKEQLLWHHSEKLAV 801

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLI+T    PIRV KNLRVC DCHTA K+IS V  REI++RD NRFHH +DG CSC D
Sbjct: 802 AFGLIATPPGAPIRVKKNLRVCIDCHTAFKFISKVASREIIVRDINRFHHFRDGSCSCGD 861

Query: 860 YW 861
           YW
Sbjct: 862 YW 863



 Score = 55.1 bits (131), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 47/212 (22%), Positives = 90/212 (42%), Gaps = 43/212 (20%)

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           +  G  IHARII+ G        N L+++YS+C     A ++  +  + +++SW+++I+G
Sbjct: 66  VSSGMAIHARIIRLGLLGLR---NRLVNLYSKCQCFRVARKLVIDSSEPDLVSWSALISG 122

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR---------- 614
           + ++G    AL  +Y+M   G K N  T+ +VL  CS    +  G +  R          
Sbjct: 123 YVQNGRGEEALLTYYEMYLLGAKGNEFTFSSVLKGCSLTRNLELGKQIHRVALVTEMIST 182

Query: 615 -----------------SMYDE------HGIVQRMEHYA------CMVDLLGRSGSLTEA 645
                             + DE      HG + ++ + +       ++D+  +SG    A
Sbjct: 183 GISPNEFSLSTVLNACAGLEDENYGMKVHGYLIKLGYDSDPFSANALLDMYAKSGCPEAA 242

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           +     +P   D++ W   +  C +H   +L 
Sbjct: 243 IAVFYEIP-KPDIVSWNAVIAGCVLHEKNDLA 273


>gi|449458534|ref|XP_004147002.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 989

 Score =  594 bits (1532), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 296/806 (36%), Positives = 487/806 (60%), Gaps = 7/806 (0%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G    +I+    M  +G  P+  T +  LK+C       LGK +H+   +  L  +  +
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++L+ LY+KCG++  A+K+F  M  + D V+W+ +++ Y  RG     + +F  M+EL 
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYAQRGDVTGVLKLFCSMMELD 309

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
              NE+  + V++ C+N++N+  G +I+  ++KCGY + +  +GC L+DM+ K  + ++ 
Sbjct: 310 VKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY-EGNEFIGCGLVDMYSKCGLAID- 367

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VF  + + + V W+ +IT   Q G   ++I+LF  M L   LP+++T+  ++SA + 
Sbjct: 368 AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 G+ +H+   + G   DV V  +LV MY K   +G V D  K+++ M+D +++SW
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK---NGCVHDGTKLYESMVDRDLISW 484

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A ++G    G  D+  + +F  M++    PN +TF S+L +C  L D +   QV+ H +
Sbjct: 485 NAYLSGLHDCGMYDR-PLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHII 543

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K     ++ V  +LI MYA+   +EDA  AF  L  ++L ++  ++  YA+    EKA  
Sbjct: 544 KNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALN 603

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
              +++  GV  + +T A  LSG SS+ ++  G+Q+H+ + KSG  S+  + +AL+ MY+
Sbjct: 604 YFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYA 663

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  +E A  +F+ +  R+ I+W ++I G+A++G   +AL  F  ML +GI P+G+T+  
Sbjct: 664 KCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTG 723

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LSACSH GL+ EG +HF SMY + GI   ++H ACMVD+LGR G   E  +FI+ M LS
Sbjct: 724 ILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLS 783

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            + L+W T LGA ++H +  LG+ AA  + E  P++ +++ILLSN++A+ G W+ V  +R
Sbjct: 784 QNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVR 843

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             M  + + KE GCSW+EA+ +VH F   + SHP+  EI+ +LD+L  ++    Y+P T 
Sbjct: 844 SLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTE 903

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
           +VLH + E +K + L  HSE++A+ F LISTS  K IR+FKNLR+C DCH  +K+IS +T
Sbjct: 904 YVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSIT 963

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            +EIV+RD  RFHH K+G CSCND+W
Sbjct: 964 NQEIVVRDVRRFHHFKNGACSCNDFW 989



 Score =  302 bits (773), Expect = 7e-79,   Method: Compositional matrix adjust.
 Identities = 182/610 (29%), Positives = 315/610 (51%), Gaps = 9/610 (1%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L  YS +L+ C   R+  + K +H L+ +  + P+S +  SL+++Y+KC     A  +  
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M + RD+VSW+++I   V  G   D+I++F EM   G  PNE+  +  ++ACS    + 
Sbjct: 172 KMPD-RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD 230

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +G  ++    K G    D+ VG AL+D++ K   ++E A K+F  M E+N V W +++  
Sbjct: 231 LGKQMHAQAFKLGLL-LDLFVGSALVDLYAKCG-EIELASKMFIGMPEQNDVTWNVLLNG 288

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G     ++LF  M+      + FTL+ V+  C+  +    G+ +HS  I+ G   +
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             +GC LVDMY+KC   G   D+  VF  +   +++ W+A+IT   Q  G+ +E++KLF 
Sbjct: 349 EFIGCGLVDMYSKC---GLAIDAIGVFKTIKKPDIVVWSALITCLDQQ-GQSEESIKLFH 404

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M  G   PN +T  S+L A  N  +    + ++    K G   D  V N+L++MY ++G
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            + D  K +ES+ +++L+S+N  +         ++   + + + + G   + YTF S+L 
Sbjct: 465 CVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILG 524

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             S +  +  G Q+HA IIK+  + N+ +  ALI MY++C  +E A   F  +  R++ +
Sbjct: 525 SCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFT 584

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           WT +IT +A+     +AL  F +M  +G+KPN  T    LS CS    + EG +   SM 
Sbjct: 585 WTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMV 643

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            + G V  M   + +VD+  + G + EA     ++ +  D + W T +     +G     
Sbjct: 644 FKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQGNKA 702

Query: 678 KHAAEMILEQ 687
             A  M+L++
Sbjct: 703 LTAFRMMLDE 712


>gi|224075493|ref|XP_002304652.1| predicted protein [Populus trichocarpa]
 gi|222842084|gb|EEE79631.1| predicted protein [Populus trichocarpa]
          Length = 820

 Score =  593 bits (1530), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 320/824 (38%), Positives = 492/824 (59%), Gaps = 16/824 (1%)

Query: 46  LSNRLIYHLNDGRVQKAIFTL---DLMTQKGNH--PDLDTY--SLLLKSCIRSRNFHLGK 98
           L ++L+ H N  +   A+  +     + Q+ +H  P+ +TY    LL+SCIR+ +   GK
Sbjct: 5   LRSKLLQHPNHCKSNTALCIITQRSFLAQRTSHSSPEFNTYIYGSLLQSCIRNGDCATGK 64

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
            +H  + +     +    N L++ Y K   L +A K+F  M + R+ VS+ ++I  Y   
Sbjct: 65  YLHCEIIKKGNCLDLFANNILLNFYVKYDSLPDAAKLFDEMPD-RNTVSFVTLIQGYSQC 123

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
            +  +AI +F  +   G   N + FS V++   + E   +G  ++  + K G FDSD  V
Sbjct: 124 LRFSEAIGLFSRLQGEGHELNPFVFSTVLKLLVSAEWAKLGFSVHACVYKLG-FDSDAFV 182

Query: 219 GCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           G ALID + V G    E A +VFD +  K+ V WT M+    +  C  ++++LF  M + 
Sbjct: 183 GTALIDCYSVCGYA--ECARQVFDAIEYKDMVSWTGMVACYVENECFEESLKLFSRMRIV 240

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           GF P+ FT + V+ AC  LE+F  GK +H  A +T    ++ VG  L+D+Y K    G V
Sbjct: 241 GFKPNNFTFASVLKACVGLEVFNVGKAVHGCAFKTSYLEELFVGVELIDLYIK---SGDV 297

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           DD+ +VF+ M   +V+ W+ +I  Y QS  + +EA+++F  M +G V PN FT AS+L+A
Sbjct: 298 DDALQVFEEMPKDDVIPWSFMIARYAQSE-QSEEAIEMFCRMRRGLVLPNQFTLASLLQA 356

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L+D  +  Q++ H VK G  ++  V N+L+ MYA+ GRME++ + F        VS+
Sbjct: 357 CASLVDLQLGNQIHCHVVKVGLDMNVFVSNALMDMYAKCGRMENSLQLFSESPNCTDVSW 416

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           NT++  Y +  N EKA  L  ++ +  V  +  T++S+L   + I A+  G QIH+  +K
Sbjct: 417 NTVIVGYVQAGNGEKALILFKDMLECQVQGTEVTYSSVLRACAGIAALEPGSQIHSLSVK 476

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           + ++ N  + NALI MY++C N++ A  VF  + + + +SW +MI+G++ HG    AL+ 
Sbjct: 477 TIYDKNTVVGNALIDMYAKCGNIKDARLVFDMLREHDQVSWNAMISGYSVHGLYGEALKT 536

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F  ML    KP+ +T++ +LSACS+AGL+  G  +F+SM +E+ I    EHY CMV LLG
Sbjct: 537 FESMLETECKPDKVTFVGILSACSNAGLLDRGQAYFKSMVEEYDIEPCAEHYTCMVWLLG 596

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           RSG L +A + +  +P    V+VWR  L AC +H D ELG+ +A+ +LE +P+D A H+L
Sbjct: 597 RSGHLDKAAKLVHEIPFEPSVMVWRALLSACVIHNDVELGRISAQRVLEIEPEDEATHVL 656

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN+YA+A  W  VA+IR  MK + + KE G SWIE   +VH F VG+TSHP T  I   
Sbjct: 657 LSNIYANARRWGNVASIRTSMKRKGIRKEPGLSWIENQGRVHYFSVGDTSHPDTKLINGM 716

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           L+ L +K +  GY+PD + VL ++E+  K Q L+ HSE++A+A+GLI T    P+R+ KN
Sbjct: 717 LEWLNMKARNEGYVPDFSSVLLDVEDVDKEQRLWVHSERLALAYGLIRTPSISPLRIIKN 776

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LR+C DCH AIK IS +  R+I++RD NRFHH  +G CSC DYW
Sbjct: 777 LRICADCHAAIKLISKIVQRDIIIRDMNRFHHFHEGICSCGDYW 820


>gi|168068035|ref|XP_001785902.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162662428|gb|EDQ49285.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 908

 Score =  590 bits (1520), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 320/809 (39%), Positives = 482/809 (59%), Gaps = 14/809 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR Q+A      M ++G  P+  TY  +L +   +      K VHS    + L  +  + 
Sbjct: 110 GRGQEAFHRFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVG 169

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+ +Y+K G +++A  +F  M  +RDI SW+ MI      G+  +A  +F++M   G 
Sbjct: 170 NALVHMYAKSGSIDDARVVFDGM-VERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGC 228

Query: 177 CPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
            PN   + +++ A + T   A+  +  ++    K G F SD+ VG ALI M+ K GS+D 
Sbjct: 229 LPNLTTYLSILNASAITSTGALEWVKEVHKHAGKAG-FISDLRVGNALIHMYAKCGSID- 286

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A  VFD M +++ + W  MI    Q GC  +A  +FL M   GF+PD  T   +++  
Sbjct: 287 -DARLVFDGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTH 345

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
                +   K++H  A+  GL  D+ VG + V MY +C   GS+DD++ +FD++   NV 
Sbjct: 346 VSTGAWEWVKEVHKHAVEVGLVSDLRVGSAFVHMYIRC---GSIDDAQLIFDKLAVRNVT 402

Query: 354 SWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +W A+I G  Q   GR  EA+ LF  M +    P+  TF ++L A          ++V++
Sbjct: 403 TWNAMIGGVAQQKCGR--EALSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHS 460

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +A+  G  +D  VGN+L+ MYA+ G    A++ F+ + E+N+ ++  M+   A++    +
Sbjct: 461 YAIDAG-LVDLRVGNALVHMYAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHE 519

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           AF L  ++   G+   A T+ S+LS  +S GA+   +++H+  + +G  S+  + NAL+ 
Sbjct: 520 AFSLFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSDLRVGNALVH 579

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++C +V+ A +VF +M +R+V SWT MI G A+HG    AL++F KM  +G KPNG +
Sbjct: 580 MYAKCGSVDDARRVFDDMLERDVYSWTVMIGGLAQHGRGLDALDLFVKMKLEGFKPNGYS 639

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++AVLSACSHAGL+ EG + F S+  ++GI   MEHY CMVDLLGR+G L EA  FI +M
Sbjct: 640 FVAVLSACSHAGLVDEGRRQFLSLTQDYGIEPTMEHYTCMVDLLGRAGQLEEAKHFILNM 699

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+      W   LGAC  +G+ E+ + AA+  L+  P+  + ++LLSN+YA+ G+WE   
Sbjct: 700 PIEPGDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGNWEQKL 759

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R  M+ R + KE G SWIE DN++H F VG+TSHP++ EIYA+L  L  ++K  GY+P
Sbjct: 760 LVRSMMQRRGIRKEPGRSWIEVDNQIHSFVVGDTSHPESKEIYAKLKDLIKRLKAEGYVP 819

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           DT  VL   ++E K Q L  HSEK+A+ +GL+ T    PIRV+KNLRVC DCHTA K+IS
Sbjct: 820 DTRLVLRNTDQEYKEQALCSHSEKLAIVYGLMHTPYRNPIRVYKNLRVCSDCHTATKFIS 879

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            VTGREIV RD+ RFHH KDG CSC DYW
Sbjct: 880 KVTGREIVARDAKRFHHFKDGVCSCGDYW 908



 Score =  319 bits (818), Expect = 3e-84,   Method: Compositional matrix adjust.
 Identities = 199/619 (32%), Positives = 326/619 (52%), Gaps = 14/619 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  + A+     M ++G  P+  TY  +LK+C    +   GK +H+ + +S  + +  + 
Sbjct: 9   GYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSGFQSDVRVE 68

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+++Y KCG +++A  IF  M  +R+++SW+ MI    + G+  +A H F++M   GF
Sbjct: 69  TALVNMYVKCGSIDDAQLIFDKM-VERNVISWTVMIGGLAHYGRGQEAFHRFLQMQREGF 127

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN Y + +++ A ++   +     ++   +  G    D+ VG AL+ M+ K GS+D   
Sbjct: 128 IPNSYTYVSILNANASAGALEWVKEVHSHAVNAG-LALDLRVGNALVHMYAKSGSID--D 184

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV--SAC 293
           A  VFD M E++   WT+MI    Q G  ++A  LFL M   G LP+  T   ++  SA 
Sbjct: 185 ARVVFDGMVERDIFSWTVMIGGLAQHGRGQEAFSLFLQMERGGCLPNLTTYLSILNASAI 244

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +        K++H  A + G   D+ VG +L+ MYAKC   GS+DD+R VFD M D +V+
Sbjct: 245 TSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKC---GSIDDARLVFDGMCDRDVI 301

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW A+I G  Q+G    EA  +F  M Q    P+  T+ S+L    +       ++V+ H
Sbjct: 302 SWNAMIGGLAQNGC-GHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWEWVKEVHKH 360

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           AV+ G   D  VG++ + MY R G ++DA+  F+ L  +N+ ++N M+   A+     +A
Sbjct: 361 AVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVAQQKCGREA 420

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L  ++   G    A TF ++LS      A+   +++H+  I +G   +  + NAL+ M
Sbjct: 421 LSLFLQMRREGFFPDATTFVNILSANVGEEALEWVKEVHSYAIDAGL-VDLRVGNALVHM 479

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C N   A QVF +M +RNV +WT MI+G A+HG    A  +F +ML +GI P+  TY
Sbjct: 480 YAKCGNTMYAKQVFDDMVERNVTTWTVMISGLAQHGCGHEAFSLFLQMLREGIVPDATTY 539

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           +++LSAC+  G + E  K   S     G+V  +     +V +  + GS+ +A      M 
Sbjct: 540 VSILSACASTGAL-EWVKEVHSHAVNAGLVSDLRVGNALVHMYAKCGSVDDARRVFDDM- 597

Query: 654 LSADVLVWRTFLGACRVHG 672
           L  DV  W   +G    HG
Sbjct: 598 LERDVYSWTVMIGGLAQHG 616



 Score =  279 bits (714), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 183/582 (31%), Positives = 306/582 (52%), Gaps = 18/582 (3%)

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           MI  Y   G   DA+ ++ +M   G  PNE  + ++++AC +  ++  G  I+  +++ G
Sbjct: 1   MIGGYAEYGYAEDAMKVYSQMRREGGQPNEITYLSILKACCSPVSLKWGKKIHAHIIQSG 60

Query: 211 YFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
            F SDV V  AL++M+VK GS+D   A  +FDKM E+N + WT+MI      G  ++A  
Sbjct: 61  -FQSDVRVETALVNMYVKCGSID--DAQLIFDKMVERNVISWTVMIGGLAHYGRGQEAFH 117

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
            FL M   GF+P+ +T   +++A +        K++HS A+  GLALD+ VG +LV MYA
Sbjct: 118 RFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVGNALVHMYA 177

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           K    GS+DD+R VFD M++ ++ SWT +I G  Q  GR +EA  LF  M +G   PN  
Sbjct: 178 K---SGSIDDARVVFDGMVERDIFSWTVMIGGLAQH-GRGQEAFSLFLQMERGGCLPNLT 233

Query: 390 TFASVLKACGNLLDSNVAE---QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           T+ S+L A   +  +   E   +V+ HA K G   D  VGN+LI MYA+ G ++DAR  F
Sbjct: 234 TYLSILNASA-ITSTGALEWVKEVHKHAGKAGFISDLRVGNALIHMYAKCGSIDDARLVF 292

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + + +++++S+N M+   A+N    +AF +  +++  G    + T+ SLL+   S GA  
Sbjct: 293 DGMCDRDVISWNAMIGGLAQNGCGHEAFTIFLKMQQEGFVPDSTTYLSLLNTHVSTGAWE 352

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
             +++H   ++ G  S+  + +A + MY RC +++ A  +F ++  RNV +W +MI G A
Sbjct: 353 WVKEVHKHAVEVGLVSDLRVGSAFVHMYIRCGSIDDAQLIFDKLAVRNVTTWNAMIGGVA 412

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW-KHFRSMYDEHGIVQR 625
           +      AL +F +M  +G  P+  T++ +LSA  + G  +  W K   S   + G+V  
Sbjct: 413 QQKCGREALSLFLQMRREGFFPDATTFVNILSA--NVGEEALEWVKEVHSYAIDAGLVD- 469

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG-DTELGKHAAEMI 684
           +     +V +  + G+   A +    M +  +V  W   +     HG   E      +M+
Sbjct: 470 LRVGNALVHMYAKCGNTMYAKQVFDDM-VERNVTTWTVMISGLAQHGCGHEAFSLFLQML 528

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
            E    D   ++ + +  AS G  E+V  +        L+ +
Sbjct: 529 REGIVPDATTYVSILSACASTGALEWVKEVHSHAVNAGLVSD 570


>gi|326488767|dbj|BAJ97995.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 919

 Score =  589 bits (1518), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 310/809 (38%), Positives = 489/809 (60%), Gaps = 7/809 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  ++A+     M   G  P     S +L +C ++  F  G+LVH+ + +      
Sbjct: 118 YARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSE 177

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +V+ N+LI+LY + G L+ A ++F  M    D V+++++IS +   G    A+ +F EM 
Sbjct: 178 TVVGNALIALYLRFGSLSLAERVFSEM-PYCDRVTFNTLISRHAQCGNGESALEIFEEMR 236

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G+ P+    ++++ AC++  ++  G  ++ +LLK G    D  +  +L+D++VK  V 
Sbjct: 237 LSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAG-MSPDYIIEGSLLDLYVKCGVI 295

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A ++F      N V W LM+    Q+     +  LF  M+ +G  P+ FT   ++  
Sbjct: 296 VE-ALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMVAAGVRPNEFTYPCLLRT 354

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       G+Q+H  +I+TG   D+ V   L+DMY+K    G +D +R++ + +   +V
Sbjct: 355 CTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKY---GWLDKARRILEVLEAKDV 411

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT++I GYVQ     KEA++ F DM    + P++   AS + AC  +      +Q+++
Sbjct: 412 VSWTSMIAGYVQHE-FCKEALETFKDMQLFGIWPDNIGLASAISACAGIKAMRQGQQIHS 470

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                G + D  + N+L+++YAR GR ++A   FE++  K+ +++N MV  +A++   E+
Sbjct: 471 RVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITWNGMVSGFAQSGLYEE 530

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A E+  ++   GV  + +TF S +S ++++  I +G+QIHA +IK+G  S   + NALIS
Sbjct: 531 ALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQGKQIHATVIKTGCTSETEVANALIS 590

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y +C ++E A   F EM +RN +SW ++IT  ++HG+   AL++F +M  +G+KPN +T
Sbjct: 591 LYGKCGSIEDAKMQFFEMSERNHVSWNTIITSCSQHGWGLEALDLFDQMKQEGLKPNDVT 650

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +I VL+ACSH GL+ EG  +F+SM  EHGI  R +HYAC+VD+LGR+G L  A +F+  M
Sbjct: 651 FIGVLAACSHVGLVEEGLGYFKSMSSEHGIHPRPDHYACVVDILGRAGQLDRARKFVEEM 710

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+SA+ +VWRT L ACRVH + E+G+ AA+ +LE +P D A+++LLSN YA  G W    
Sbjct: 711 PVSANAMVWRTLLSACRVHKNIEIGELAAKYLLELEPHDSASYVLLSNAYAVTGKWACRD 770

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           ++RK MK+R + KE G SWIE  N VH F VG+  HP   +IY  L  L  ++ + GY+ 
Sbjct: 771 HVRKMMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAHQIYKYLADLDDRLAKIGYIQ 830

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
              F+ HE E+EQK    F HSEK+AVAFGL+S   S P+RV KNLRVC DCHT +K+ S
Sbjct: 831 GNYFLFHEKEKEQKDPTAFVHSEKLAVAFGLMSLPPSMPLRVIKNLRVCNDCHTWMKFTS 890

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V GREIVLRD  RFHH  +G CSC D+W
Sbjct: 891 EVMGREIVLRDVYRFHHFNNGNCSCGDFW 919



 Score =  299 bits (766), Expect = 4e-78,   Method: Compositional matrix adjust.
 Identities = 180/594 (30%), Positives = 323/594 (54%), Gaps = 12/594 (2%)

Query: 81  YSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           ++  L+ C  S +++ L  ++H+      L  + +  N LI LY+K G +  A ++F+ +
Sbjct: 44  FACALRECRGSVKHWPLVPVIHAKAITCGLGEDRIAGNLLIDLYAKKGLVQRARRVFEQL 103

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            + RD VSW +M+S Y   G   +A+ ++ +M   G  P  Y  S+V+ AC+       G
Sbjct: 104 -SARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQG 162

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
            +++  + K G   S+  VG ALI ++++ GS+ L  A +VF +M   + V +  +I+R 
Sbjct: 163 RLVHAQVYKQGSC-SETVVGNALIALYLRFGSLSL--AERVFSEMPYCDRVTFNTLISRH 219

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q G    A+ +F +M LSG+ PD  T++ +++AC+ +     GKQLHS+ ++ G++ D 
Sbjct: 220 AQCGNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSPDY 279

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +  SL+D+Y KC   G + ++ ++F      NV+ W  ++  Y Q     K +  LF  
Sbjct: 280 IIEGSLLDLYVKC---GVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAK-SFDLFCQ 335

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M+   V PN FT+  +L+ C    + N+ EQ++  ++K G   D  V   LI MY++ G 
Sbjct: 336 MVAAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGW 395

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ++ AR+  E L  K++VS+ +M+  Y ++   ++A E   +++  G+       AS +S 
Sbjct: 396 LDKARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISA 455

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            + I A+ +G+QIH+R+  SG+ ++  I+NAL+++Y+RC   + AF +F+ +E ++ I+W
Sbjct: 456 CAGIKAMRQGQQIHSRVYVSGYSADVSIWNALVNLYARCGRSKEAFSLFEAIEHKDKITW 515

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
             M++GFA+ G    ALE+F KM   G+K N  T+++ +SA ++   I +G K   +   
Sbjct: 516 NGMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASANLADIKQG-KQIHATVI 574

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           + G     E    ++ L G+ GS+ +A      M     V  W T + +C  HG
Sbjct: 575 KTGCTSETEVANALISLYGKCGSIEDAKMQFFEMSERNHV-SWNTIITSCSQHG 627



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 151/551 (27%), Positives = 285/551 (51%), Gaps = 18/551 (3%)

Query: 183 FSAVIRAC-SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
           F+  +R C  + ++  +  +I+   + CG    D   G  LID++ K  + ++ A +VF+
Sbjct: 44  FACALRECRGSVKHWPLVPVIHAKAITCG-LGEDRIAGNLLIDLYAKKGL-VQRARRVFE 101

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           +++ ++ V W  M++   + G   +A+ L+  M  SG +P  + LS V+SAC++  LF  
Sbjct: 102 QLSARDNVSWVAMLSGYARNGLGEEAVGLYHQMHCSGVVPTPYVLSSVLSACTKAALFEQ 161

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+ +H+   + G   +  VG +L+ +Y +    GS+  + +VF  M   + +++  +I+ 
Sbjct: 162 GRLVHAQVYKQGSCSETVVGNALIALYLRF---GSLSLAERVFSEMPYCDRVTFNTLISR 218

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q  G  + A+++F +M      P+  T AS+L AC ++ D N  +Q++++ +K G + 
Sbjct: 219 HAQC-GNGESALEIFEEMRLSGWTPDCVTIASLLAACASIGDLNKGKQLHSYLLKAGMSP 277

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  +  SL+ +Y + G + +A + F+S    N+V +N M+ AY +  +  K+F+L  ++ 
Sbjct: 278 DYIIEGSLLDLYVKCGVIVEALEIFKSGDRTNVVLWNLMLVAYGQISDLAKSFDLFCQMV 337

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV  + +T+  LL   +  G I  GEQIH   IK+GFES+  +   LI MYS+   ++
Sbjct: 338 AAGVRPNEFTYPCLLRTCTYAGEINLGEQIHLLSIKTGFESDMYVSGVLIDMYSKYGWLD 397

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A ++ + +E ++V+SWTSMI G+ +H F   ALE F  M   GI P+ I   + +SAC+
Sbjct: 398 KARRILEVLEAKDVVSWTSMIAGYVQHEFCKEALETFKDMQLFGIWPDNIGLASAISACA 457

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
               + +G +    +Y   G    +  +  +V+L  R G   EA     ++    D + W
Sbjct: 458 GIKAMRQGQQIHSRVYVS-GYSADVSIWNALVNLYARCGRSKEAFSLFEAIE-HKDKITW 515

Query: 662 RTFLGACRVHGDTELGKHAAEMILE--QDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
               G       + L + A E+ ++  Q          +S++ ASA     +A+I++  +
Sbjct: 516 N---GMVSGFAQSGLYEEALEVFIKMYQAGVKYNVFTFVSSISASAN----LADIKQGKQ 568

Query: 720 ERNLIKEAGCS 730
               + + GC+
Sbjct: 569 IHATVIKTGCT 579



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 162/310 (52%), Gaps = 4/310 (1%)

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKR 417
           +TG++     +K  + LF+  ++         FA  L+ C G++    +   ++  A+  
Sbjct: 13  LTGFLAHEDPEK-LLSLFAAKVRQCRGLGSVDFACALRECRGSVKHWPLVPVIHAKAITC 71

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G   D   GN LI +YA+ G ++ AR+ FE L  ++ VS+  M+  YA+N   E+A  L 
Sbjct: 72  GLGEDRIAGNLLIDLYAKKGLVQRARRVFEQLSARDNVSWVAMLSGYARNGLGEEAVGLY 131

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
           H++  +GV  + Y  +S+LS  +      +G  +HA++ K G  S   + NALI++Y R 
Sbjct: 132 HQMHCSGVVPTPYVLSSVLSACTKAALFEQGRLVHAQVYKQGSCSETVVGNALIALYLRF 191

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            ++  A +VF EM   + +++ ++I+  A+ G    ALEIF +M   G  P+ +T  ++L
Sbjct: 192 GSLSLAERVFSEMPYCDRVTFNTLISRHAQCGNGESALEIFEEMRLSGWTPDCVTIASLL 251

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           +AC+  G +++G K   S   + G+         ++DL  + G + EALE  +S   + +
Sbjct: 252 AACASIGDLNKG-KQLHSYLLKAGMSPDYIIEGSLLDLYVKCGVIVEALEIFKSGDRT-N 309

Query: 658 VLVWRTFLGA 667
           V++W   L A
Sbjct: 310 VVLWNLMLVA 319


>gi|296081733|emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 306/793 (38%), Positives = 488/793 (61%), Gaps = 25/793 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL++ I + N  LGK  H+ +  S    +  + N+L+++YSKCG L+ A ++F +   +R
Sbjct: 83  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTP-ER 141

Query: 144 DIVSWSSMISSYV-----NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           D+V+W++++ +Y      N G   + +H+F  +            + V++ C N+  +  
Sbjct: 142 DLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWA 201

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
              ++G+ +K G  + DV V  AL++++ K    +  A  +FD M E++ V W +M+   
Sbjct: 202 AEGVHGYAIKIG-LEWDVFVSGALVNIYSKCG-RMRDARLLFDWMRERDVVLWNMMLKGY 259

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC-----SELELFTSGKQLHSWAIRTG 313
            QLG  ++A +LF +   SG  PD F++  +++ C      +LEL   GKQ+H  A+++G
Sbjct: 260 VQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGCLWAGTDDLEL---GKQVHGIAVKSG 316

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
           L  DV V  SLV+MY+K    G    +R+VF+ M   +++SW ++I+   QS   ++E+V
Sbjct: 317 LDSDVSVANSLVNMYSKM---GCAYFAREVFNDMKHLDLISWNSMISSCAQSS-LEEESV 372

Query: 374 KLFSDMIQGQVAPNHFTFASVL-----KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            LF D++   + P+HFT AS+      KACG L+  +  +Q++ HA+K G   D  V + 
Sbjct: 373 NLFIDLLHEGLKPDHFTLASITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSG 432

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           ++ MY + G M +A   F  +   + V++ +M+     N N ++A  + H +  + V   
Sbjct: 433 ILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPD 492

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            YTFA+L+  +S + A+ +G Q+HA +IK    S+  +  +L+ MY++C N+E A+++FK
Sbjct: 493 EYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFK 552

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           +M  RN+  W +M+ G A+HG A  A+ +F  M + GI+P+ +++I +LSACSHAGL SE
Sbjct: 553 KMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSE 612

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
            +++  SM +++GI   +EHY+C+VD LGR+G + EA + I +MP  A   + R  LGAC
Sbjct: 613 AYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKASASINRALLGAC 672

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           R+ GD E GK  A  +   +P D AA++LLSN+YA+A  W+ V + RK MK +N+ K+ G
Sbjct: 673 RIQGDVETGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKMMKRKNVKKDPG 732

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
            SWI+  N +H F V + SHP+   IY +++++   I+E GY+PDT FVL ++E+E+K +
Sbjct: 733 FSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFVLLDVEDEEKER 792

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
            L+ HSEK+A+A+GLIST  S  IRV KNLRVCGDCH AIKYIS V  REIVLRD+NRFH
Sbjct: 793 SLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFH 852

Query: 849 HIKDGKCSCNDYW 861
           H +DG CSC DYW
Sbjct: 853 HFRDGVCSCGDYW 865



 Score =  239 bits (610), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 148/507 (29%), Positives = 263/507 (51%), Gaps = 21/507 (4%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           NDG  Q+ +    L+          T + +LK C+ S      + VH    +  LE +  
Sbjct: 160 NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 219

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +L+++YSKCG + +A  +F  M  +RD+V W+ M+  YV  G + +A  +F E    
Sbjct: 220 VSGALVNIYSKCGRMRDARLLFDWM-RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRS 278

Query: 175 GFCPNEYCFSAVIRAC--SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           G  P+E+    ++  C  + T+++ +G  ++G  +K G  DSDV V  +L++M+ K    
Sbjct: 279 GLRPDEFSVQLILNGCLWAGTDDLELGKQVHGIAVKSG-LDSDVSVANSLVNMYSK---- 333

Query: 233 LESAY---KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +  AY   +VF+ M   + + W  MI+ C Q     +++ LF+D++  G  PD FTL+ +
Sbjct: 334 MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLASI 393

Query: 290 V-----SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
                  AC  L L   GKQ+H+ AI+ G   D+ V   ++DMY KC   G + ++  VF
Sbjct: 394 TLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKC---GDMVNAGIVF 450

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           + +   + ++WT++I+G V +G  D +A++++  M Q +V P+ +TFA+++KA   +   
Sbjct: 451 NYISAPDDVAWTSMISGCVDNGNED-QALRIYHRMRQSRVMPDEYTFATLIKASSCVTAL 509

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
               Q++ + +K     D  VG SL+ MYA+ G +EDA + F+ +  +N+  +N M+   
Sbjct: 510 EQGRQLHANVIKLDCVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGL 569

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESN 523
           A++ N+E+A  L   ++  G+     +F  +LS  S  G   +  E +H+     G E  
Sbjct: 570 AQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPE 629

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEM 550
              Y+ L+    R   V+ A +V + M
Sbjct: 630 IEHYSCLVDALGRAGLVQEADKVIETM 656



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK--SCIRSRNFHLGKLVHSLLTRSKLEP 111
           +++G   +A+     M Q    PD  T++ L+K  SC+ +     G+ +H+ + +     
Sbjct: 469 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA--LEQGRQLHANVIKLDCVS 526

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +  SL+ +Y+KCG++ +A ++FK M N R+I  W++M+      G   +A+++F  M
Sbjct: 527 DPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 585

Query: 172 LELGFCPNEYCFSAVIRACSN 192
              G  P+   F  ++ ACS+
Sbjct: 586 KSHGIEPDRVSFIGILSACSH 606


>gi|297743497|emb|CBI36364.3| unnamed protein product [Vitis vinifera]
          Length = 832

 Score =  588 bits (1517), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 297/791 (37%), Positives = 480/791 (60%), Gaps = 42/791 (5%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG---DLNEANKIFK 137
           YS L++ CI S +F  GK +H+ +  +   P++ ++  ++ LY++ G   DL  A K+F+
Sbjct: 74  YSSLIQDCIDSNSFQRGKSIHTQMISNGYNPDAYLMTKILMLYARSGCLDDLCYARKLFE 133

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M  +R++ +W++MI +Y      ++A  +F  ML++G CP+ + F++ +R C    +  
Sbjct: 134 EMP-ERNLTAWNTMILAYARVDDYMEAWGIFDRMLKIGVCPDNFTFASALRVCGALRSRD 192

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  ++  L+ CG F  D  VG ALIDM+ K   D ES  KVFD+M E+N V W  +I+ 
Sbjct: 193 GGKQVHSKLIACG-FKGDTFVGNALIDMYAKCD-DEESCLKVFDEMGERNQVTWNSIISA 250

Query: 258 CTQLGCPRDAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
             Q G   DA+ LFL M  S  G  PD+FT + +++ C+       G+Q+H+  IR  + 
Sbjct: 251 EAQFGHFNDALVLFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANIT 310

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            ++ V   LV MY++C   G ++ ++++F+RM + N  SW ++I GY Q  G  +EA++L
Sbjct: 311 KNIIVETELVHMYSEC---GRLNYAKEIFNRMAERNAYSWNSMIEGY-QQNGETQEALRL 366

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  M    + P+ F+ +S+L +C +L DS    +++   V+     +  +   L+ MYA+
Sbjct: 367 FKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVRNTMEEEGILQVVLVDMYAK 426

Query: 436 SGRMEDARKAFESLFEK--NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            G M+ A K ++   +K  N   +N+++  YA     +++F    E+ ++ +     T  
Sbjct: 427 CGSMDYAWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMV 486

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           ++               ++  ++++          AL+ MYS+C  +  A  VF  M  +
Sbjct: 487 TI---------------VNLLVLET----------ALVDMYSKCGAITKARTVFDNMNGK 521

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           N++SW +MI+G++KHG +  AL ++ +M   G+ PN +T++A+LSACSH GL+ EG + F
Sbjct: 522 NIVSWNAMISGYSKHGCSKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLRIF 581

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            SM +++ I  + EHY CMVDLLGR+G L +A EF+  MP+  +V  W   LGACRVH D
Sbjct: 582 TSMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKMPIEPEVSTWGALLGACRVHKD 641

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            ++G+ AA+ + E DPQ+P  ++++SN+YA+AG W+ V +IR+ MK + + K+ G SWIE
Sbjct: 642 MDMGRLAAQRLFELDPQNPGPYVIMSNIYAAAGRWKEVEDIRQMMKMKGVKKDPGVSWIE 701

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH---ELEEEQKVQYL 790
            ++++  FH G  +HPKT EIY  L  L L+ K  GY+PDT+F+L    +++EE++ +YL
Sbjct: 702 INSEIQIFHAGSKTHPKTEEIYNNLRHLTLQSKGLGYIPDTSFILQNVKDIKEEEEEEYL 761

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
            QHSE++A++ GLIS  K   IRVFKNLR+CGDCHTA K+IS +TGR I+ RD+NRFHH 
Sbjct: 762 LQHSERLALSLGLISLPKKSTIRVFKNLRICGDCHTATKFISKITGRRIIARDTNRFHHF 821

Query: 851 KDGKCSCNDYW 861
           ++GKCSC DYW
Sbjct: 822 ENGKCSCGDYW 832



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 145/503 (28%), Positives = 259/503 (51%), Gaps = 38/503 (7%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
            D M + G  PD  T++  L+ C   R+   GK VHS L     + ++ + N+LI +Y+K
Sbjct: 163 FDRMLKIGVCPDNFTFASALRVCGALRSRDGGKQVHSKLIACGFKGDTFVGNALIDMYAK 222

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL--GFCPNEYCF 183
           C D     K+F  MG +R+ V+W+S+IS+    G   DA+ +F+ M E   G  P+++ F
Sbjct: 223 CDDEESCLKVFDEMG-ERNQVTWNSIISAEAQFGHFNDALVLFLRMQESEDGIQPDQFTF 281

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           + ++  C+N  N   G  I+  L++      ++ V   L+ M+ +    L  A ++F++M
Sbjct: 282 TTLLTLCANQRNDNQGRQIHAHLIRAN-ITKNIIVETELVHMYSECG-RLNYAKEIFNRM 339

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            E+N   W  MI    Q G  ++A+RLF  M L+G  PD F+LS ++S+C  L     G+
Sbjct: 340 AERNAYSWNSMIEGYQQNGETQEALRLFKQMQLNGIKPDCFSLSSMLSSCVSLSDSQKGR 399

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML--DHNVMSWTAIITG 361
           +LH++ +R  +  +  +   LVDMYAKC   GS+D + KV+D+ +  D N   W +I+ G
Sbjct: 400 ELHNFIVRNTMEEEGILQVVLVDMYAKC---GSMDYAWKVYDQTIKKDRNTALWNSILAG 456

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y   G + KE+   F +M++  +  +  T  +++    NLL                   
Sbjct: 457 YANKGLK-KESFNHFLEMLESDIEYDVLTMVTIV----NLL------------------- 492

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              +  +L+ MY++ G +  AR  F+++  KN+VS+N M+  Y+K+  S++A  L  E+ 
Sbjct: 493 --VLETALVDMYSKCGAITKARTVFDNMNGKNIVSWNAMISGYSKHGCSKEALILYEEMP 550

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANV 540
             G+  +  TF ++LS  S  G + +G +I   + +    E+    Y  ++ +  R   +
Sbjct: 551 KKGMYPNEVTFLAILSACSHTGLVEEGLRIFTSMQEDYNIEAKAEHYTCMVDLLGRAGRL 610

Query: 541 EAAFQVFKEME-DRNVISWTSMI 562
           E A +  ++M  +  V +W +++
Sbjct: 611 EDAKEFVEKMPIEPEVSTWGALL 633



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 207/402 (51%), Gaps = 42/402 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H ND  V   +F     ++ G  PD  T++ LL  C   RN + G+ +H+ L R+ +  N
Sbjct: 256 HFNDALV---LFLRMQESEDGIQPDQFTFTTLLTLCANQRNDNQGRQIHAHLIRANITKN 312

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++   L+ +YS+CG LN A +IF  M  +R+  SW+SMI  Y   G+  +A+ +F +M 
Sbjct: 313 IIVETELVHMYSECGRLNYAKEIFNRMA-ERNAYSWNSMIEGYQQNGETQEALRLFKQMQ 371

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
             G  P+ +  S+++ +C +  +   G  ++ F+++    + +  +   L+DM+ K GS+
Sbjct: 372 LNGIKPDCFSLSSMLSSCVSLSDSQKGRELHNFIVR-NTMEEEGILQVVLVDMYAKCGSM 430

Query: 232 DLESAYKVFDKMTEK--NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           D   A+KV+D+  +K  NT  W  ++      G  +++   FL+M+ S    D  T+  +
Sbjct: 431 DY--AWKVYDQTIKKDRNTALWNSILAGYANKGLKKESFNHFLEMLESDIEYDVLTMVTI 488

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           V+                      L L+     +LVDMY+KC   G++  +R VFD M  
Sbjct: 489 VNL---------------------LVLET----ALVDMYSKC---GAITKARTVFDNMNG 520

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            N++SW A+I+GY + G   KEA+ L+ +M +  + PN  TF ++L AC +        +
Sbjct: 521 KNIVSWNAMISGYSKHGC-SKEALILYEEMPKKGMYPNEVTFLAILSACSHTGLVEEGLR 579

Query: 410 VYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL 449
           ++T +++    ++    +   ++ +  R+GR+EDA++  E +
Sbjct: 580 IFT-SMQEDYNIEAKAEHYTCMVDLLGRAGRLEDAKEFVEKM 620


>gi|224123788|ref|XP_002319164.1| predicted protein [Populus trichocarpa]
 gi|222857540|gb|EEE95087.1| predicted protein [Populus trichocarpa]
          Length = 989

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 296/807 (36%), Positives = 492/807 (60%), Gaps = 7/807 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++AI     M   G  P    +S +L  C + + F +G+ +H+L+ +      + 
Sbjct: 190 QNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETY 249

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L++LYS+  +   A K+F  M +K D VS++S+IS    +G    A+ +F +M   
Sbjct: 250 VCNALVTLYSRMPNFVSAEKVFSKMQSK-DEVSFNSLISGLAQQGFSDGALELFTKMKRD 308

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+    ++++ AC++   +  G  ++ +++K G   SD+ V  AL+D++V  S D++
Sbjct: 309 YLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAG-ISSDMIVEGALLDLYVNCS-DIK 366

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           +A+++F     +N V W +M+    +L    ++ R+F  M + G +P++FT   ++  C+
Sbjct: 367 TAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIPNQFTYPSILRTCT 426

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            +     G+Q+H+  I+TG   +V V   L+DMYAK    G +D +  +   + + +V+S
Sbjct: 427 SVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAK---HGKLDTAHVILRTLTEDDVVS 483

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA+I+GY Q      EA+K F +M+   +  ++  F+S + AC  +   N   Q++  +
Sbjct: 484 WTALISGYAQHN-LFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALNQGRQIHAQS 542

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
              G + D  +GN+L+S+YAR GR+++A   FE +  K+ +S+N ++  +A++   E A 
Sbjct: 543 YVSGYSEDLSIGNALVSLYARCGRIKEAYLEFEKIDAKDSISWNGLISGFAQSGYCEDAL 602

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           ++  ++    +  S +TF S +S A++I  I +G+QIHA IIK GF+S+  + NALI+ Y
Sbjct: 603 KVFAQMNRAKLEASFFTFGSAVSAAANIANIKQGKQIHAMIIKRGFDSDIEVSNALITFY 662

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C ++E A + F EM ++N +SW +MITG+++HG+   A+ +F KM   G  PN +T++
Sbjct: 663 AKCGSIEDARREFCEMPEKNDVSWNAMITGYSQHGYGNEAVNLFEKMKQVGEMPNHVTFV 722

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            VLSACSH GL+++G  +F SM  EHG+V +  HYAC+VDL+ R+G L+ A +FI  MP+
Sbjct: 723 GVLSACSHVGLVTKGLGYFESMSKEHGLVPKPAHYACVVDLISRAGFLSRARKFIEEMPI 782

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D  +WRT L AC VH + E+G+ AA+ +LE +P+D A ++LLSN+YA +G W+     
Sbjct: 783 EPDATIWRTLLSACTVHKNVEVGEFAAQHLLELEPEDSATYVLLSNMYAVSGKWDCRDQT 842

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R+ M+ R + KE G SWIE  N VH F+VG+  HP   +IY  L +L  K  E GY  D 
Sbjct: 843 RQMMRNRGVKKEPGRSWIEVKNSVHAFYVGDRLHPLADKIYEFLAELNKKAAEIGYFQDR 902

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
             +L+++E+EQK   ++ HSEK+A+ FGL+S S + PI V KNLRVC DCH+ IK++S +
Sbjct: 903 YSLLNDVEQEQKDPTVYIHSEKLAITFGLLSLSDTVPIHVMKNLRVCKDCHSWIKFVSKI 962

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + R I++RD+ RFHH + G CSC DYW
Sbjct: 963 SNRAIIVRDAYRFHHFEGGICSCKDYW 989



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 172/582 (29%), Positives = 316/582 (54%), Gaps = 10/582 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G   +  TY  LL  C+ S +    K +H  + +      SV+ N L+ +Y   GD
Sbjct: 1   MEHRGICANCQTYIWLLDLCLNSGSLVECKKLHGKILKLGFGNESVLCNKLVDVYFALGD 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+   K+F+ M N R + SW  +IS ++ +      + +F  M+E    P E  F++V+R
Sbjct: 61  LDGVVKVFEDMPN-RSVRSWDKIISGFMEKKMSNRVLDLFSCMIEENVSPTEISFASVLR 119

Query: 189 ACSNTE-NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           ACS     +     I+  ++  G   S + +   LI ++ K  + + SA KVFD +  K+
Sbjct: 120 ACSGHRIGIRYAEQIHARIICHGLLCSPI-ISNPLIGLYAKNGLII-SARKVFDNLCTKD 177

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
           +V W  MI+  +Q G   +AI LF +M  +G  P  +  S V+S C++++LF  G+QLH+
Sbjct: 178 SVSWVAMISGFSQNGYEEEAIHLFCEMHTAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHA 237

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
              + G +L+  V  +LV +Y++     +   + KVF +M   + +S+ ++I+G  Q G 
Sbjct: 238 LVFKYGSSLETYVCNALVTLYSRMP---NFVSAEKVFSKMQSKDEVSFNSLISGLAQQGF 294

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            D  A++LF+ M +  + P+  T AS+L AC +       EQ++++ +K G + D  V  
Sbjct: 295 SDG-ALELFTKMKRDYLKPDCVTVASLLSACASNGALCKGEQLHSYVIKAGISSDMIVEG 353

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +L+ +Y     ++ A + F +   +N+V +N M+ A+ K  N  ++F +  +++  G+  
Sbjct: 354 ALLDLYVNCSDIKTAHEMFLTAQTENVVLWNVMLVAFGKLDNLSESFRIFRQMQIKGLIP 413

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           + +T+ S+L   +S+GA+  GEQIH ++IK+GF+ N  + + LI MY++   ++ A  + 
Sbjct: 414 NQFTYPSILRTCTSVGALDLGEQIHTQVIKTGFQFNVYVCSVLIDMYAKHGKLDTAHVIL 473

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           + + + +V+SWT++I+G+A+H   A AL+ F +ML  GI+ + I + + +SAC+    ++
Sbjct: 474 RTLTEDDVVSWTALISGYAQHNLFAEALKHFKEMLNRGIQSDNIGFSSAISACAGIQALN 533

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEF 648
           +G +   +     G  + +     +V L  R G + EA LEF
Sbjct: 534 QG-RQIHAQSYVSGYSEDLSIGNALVSLYARCGRIKEAYLEF 574



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/366 (32%), Positives = 203/366 (55%), Gaps = 7/366 (1%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K+LH   ++ G   +  +   LVD+Y      G +D   KVF+ M + +V SW  II+G+
Sbjct: 30  KKLHGKILKLGFGNESVLCNKLVDVYFAL---GDLDGVVKVFEDMPNRSVRSWDKIISGF 86

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKRGRAL 421
           ++    ++  + LFS MI+  V+P   +FASVL+AC G+ +    AEQ++   +  G   
Sbjct: 87  MEKKMSNR-VLDLFSCMIEENVSPTEISFASVLRACSGHRIGIRYAEQIHARIICHGLLC 145

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              + N LI +YA++G +  ARK F++L  K+ VS+  M+  +++N   E+A  L  E+ 
Sbjct: 146 SPIISNPLIGLYAKNGLIISARKVFDNLCTKDSVSWVAMISGFSQNGYEEEAIHLFCEMH 205

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             G+  + Y F+S+LSG + I     GEQ+HA + K G      + NAL+++YSR  N  
Sbjct: 206 TAGIFPTPYVFSSVLSGCTKIKLFDVGEQLHALVFKYGSSLETYVCNALVTLYSRMPNFV 265

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           +A +VF +M+ ++ +S+ S+I+G A+ GF+  ALE+F KM  D +KP+ +T  ++LSAC+
Sbjct: 266 SAEKVFSKMQSKDEVSFNSLISGLAQQGFSDGALELFTKMKRDYLKPDCVTVASLLSACA 325

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
             G + +G +   S   + GI   M     ++DL      +  A E   +   + +V++W
Sbjct: 326 SNGALCKG-EQLHSYVIKAGISSDMIVEGALLDLYVNCSDIKTAHEMFLTAQ-TENVVLW 383

Query: 662 RTFLGA 667
              L A
Sbjct: 384 NVMLVA 389


>gi|357453021|ref|XP_003596787.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355485835|gb|AES67038.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 867

 Score =  587 bits (1514), Expect = e-165,   Method: Compositional matrix adjust.
 Identities = 308/825 (37%), Positives = 492/825 (59%), Gaps = 13/825 (1%)

Query: 39  QPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
           +PTT +  +  L  +  D + ++A+     +      PD  T S +   C  S +  LG+
Sbjct: 54  RPTTLKEHNQLLFSYSRDKQTKEALNLFVSLLHSSLQPDESTLSCVFNICAGSLDGKLGR 113

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
            VH    +  L  +  +  SL+ +Y K  ++N+  ++F  MG +R++VSW+S+++ Y   
Sbjct: 114 QVHCQCVKFGLVDHVSVGTSLVDMYMKTENVNDGRRVFDEMG-ERNVVSWTSLLAGYSWN 172

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G       +F +M   G  PN Y  S VI A  N   V IG  ++  ++K G F+  + V
Sbjct: 173 GLYGYVWELFCQMQYEGVLPNRYTVSTVIAALVNEGVVGIGLQVHAMVVKHG-FEEAIPV 231

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             +LI ++ +  + L  A  VFDKM  ++ V W  MI    + G   +   +F  M L+G
Sbjct: 232 FNSLISLYSRLGM-LRDARDVFDKMEIRDWVTWNSMIAGYVRNGQDLEVFEIFNKMQLAG 290

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             P   T + V+ +C+ L      K +   A+++G   D  V  +L+   +KC     +D
Sbjct: 291 VKPTHMTFASVIKSCASLRELALVKLMQCKALKSGFTTDQIVITALMVALSKCK---EMD 347

Query: 339 DSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           D+  +F  M +  NV+SWTA+I+G +Q+GG D +AV LFS M +  V PNHFT++++L  
Sbjct: 348 DALSLFSLMEEGKNVVSWTAMISGCLQNGGND-QAVNLFSQMRREGVKPNHFTYSAILTV 406

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
              +  S    +++   +K        VG +L+  Y + G   DA K FE +  K+L+++
Sbjct: 407 HYPVFVS----EMHAEVIKTNYERSSSVGTALLDAYVKLGNTIDAVKVFEIIEAKDLMAW 462

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG-ASSIGAIGKGEQIHARII 516
           + M+  YA+   +E+A +L H++   G+  + +TF+S+++  AS   A  +G+Q HA  I
Sbjct: 463 SAMLAGYAQTGETEEAAKLFHQLIKEGIKPNEFTFSSVINACASPTAAAEQGKQFHAYAI 522

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K    +  C+ +AL++MY++  N+++A +VFK  ++R+++SW SMI+G+++HG A +ALE
Sbjct: 523 KMRLNNALCVSSALVTMYAKRGNIDSAHEVFKRQKERDLVSWNSMISGYSQHGQAKKALE 582

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M    +  + +T+I V++AC+HAGL+ +G K+F SM ++H I   M+HY+CM+DL 
Sbjct: 583 VFDEMQKRNMDVDAVTFIGVITACTHAGLVEKGQKYFNSMINDHHINPTMKHYSCMIDLY 642

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
            R+G L +A+  I  MP      VWRT LGA RVH + ELG+ AAE ++   P+D AA++
Sbjct: 643 SRAGMLEKAMGIINEMPFPPGATVWRTLLGAARVHRNVELGELAAEKLISLQPEDSAAYV 702

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YA+AG+W+   N+RK M +R + KE G SWIE  NK + F  G+ +HP + +IY+
Sbjct: 703 LLSNMYAAAGNWQERTNVRKLMDKRKVKKEPGYSWIEVKNKTYSFLAGDLTHPLSNQIYS 762

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
           +L +L++++K+ GY PDT  V H++E+EQK   L  HSE++A+AFGLI+T    PI++ K
Sbjct: 763 KLSELSIRLKDAGYQPDTKNVFHDIEDEQKETILSHHSERLAIAFGLIATPPEIPIQIVK 822

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVCGDCH   K +S+V  R IV+RDSNRFHH KDG CSC DYW
Sbjct: 823 NLRVCGDCHNFTKLVSLVEQRYIVVRDSNRFHHFKDGLCSCGDYW 867


>gi|359484317|ref|XP_003633097.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1005

 Score =  587 bits (1512), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 298/795 (37%), Positives = 486/795 (61%), Gaps = 11/795 (1%)

Query: 69   MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
            M ++G   +  TY+  LK+C    +   GK VH+   +     +  + ++L+ LY+KCG+
Sbjct: 220  MRREGVEANEFTYATALKACSMCLDLEFGKQVHAEAIKVGDFSDLFVGSALVDLYAKCGE 279

Query: 129  LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCFSAV 186
            +  A ++F  M  K++ VSW+++++ +   G     +++F  M   E+ F  +++  S V
Sbjct: 280  MVLAERVFLCM-PKQNAVSWNALLNGFAQMGDAEKVLNLFCRMTGSEINF--SKFTLSTV 336

Query: 187  IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
            ++ C+N+ N+  G I++   ++ G  + D  + C L+DM+ K  +  + A KVF ++ + 
Sbjct: 337  LKGCANSGNLRAGQIVHSLAIRIGC-ELDEFISCCLVDMYSKCGLAGD-ALKVFVRIEDP 394

Query: 247  NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
            + V W+ +IT   Q G  R+A  +F  M  SG +P++FTL+ +VSA ++L     G+ +H
Sbjct: 395  DVVSWSAIITCLDQKGQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIH 454

Query: 307  SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            +   + G   D  V  +LV MY K    GSV D  +VF+   + +++SW A+++G+  + 
Sbjct: 455  ACVCKYGFEYDNTVCNALVTMYMKI---GSVQDGCRVFEATTNRDLISWNALLSGFHDNE 511

Query: 367  GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
              D   +++F+ M+     PN +TF S+L++C +L D ++ +QV+   VK     +D VG
Sbjct: 512  TCDT-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVG 570

Query: 427  NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
             +L+ MYA++  +EDA   F  L +++L ++  +V  YA++   EKA +   +++  GV 
Sbjct: 571  TALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVK 630

Query: 487  TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
             + +T AS LSG S I  +  G Q+H+  IK+G   +  + +AL+ MY++C  VE A  V
Sbjct: 631  PNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVV 690

Query: 547  FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            F  +  R+ +SW ++I G+++HG   +AL+ F  ML +G  P+ +T+I VLSACSH GLI
Sbjct: 691  FDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLI 750

Query: 607  SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             EG KHF S+   +GI   +EHYACMVD+LGR+G   E   FI  M L+++VL+W T LG
Sbjct: 751  EEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLG 810

Query: 667  ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
            AC++HG+ E G+ AA  + E +P+  + +ILLSN++A+ G W+ V N+R  M  R + KE
Sbjct: 811  ACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKKE 870

Query: 727  AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
             GCSW+E + +VH F   + SHPK  EI+ +L  L  K+   GY P+T+ VLH + + +K
Sbjct: 871  PGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVGYTPNTDHVLHNVSDREK 930

Query: 787  VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
             + LF HSE++A+AF L+STS  K IR+FKNLR+CGDCH  +K IS +T +E+V+RD N 
Sbjct: 931  QELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMKSISEITNQELVVRDINC 990

Query: 847  FHHIKDGKCSCNDYW 861
            FHH K+G CSC ++W
Sbjct: 991  FHHFKNGSCSCQNFW 1005



 Score =  341 bits (874), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 206/669 (30%), Positives = 353/669 (52%), Gaps = 32/669 (4%)

Query: 19  KPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDL 78
           K S+P+R N  P +  P        E +  + I+   D               KG    L
Sbjct: 92  KLSSPNRPNSTPGNKIP--------ETVEKKRIWRGLD------------FDSKGR---L 128

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
             YS +L++C    + + GK +H  + +S + P+S + NSL+++Y+KCG  N A K+F  
Sbjct: 129 RQYSGMLRTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 188

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           +  +RD+VSW+++I+ +V  G    A+++F EM   G   NE+ ++  ++ACS   ++  
Sbjct: 189 I-PERDVVSWTALITGFVAEGYGSGAVNLFCEMRREGVEANEFTYATALKACSMCLDLEF 247

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  ++   +K G F SD+ VG AL+D++ K   ++  A +VF  M ++N V W  ++   
Sbjct: 248 GKQVHAEAIKVGDF-SDLFVGSALVDLYAKCG-EMVLAERVFLCMPKQNAVSWNALLNGF 305

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q+G     + LF  M  S     +FTLS V+  C+      +G+ +HS AIR G  LD 
Sbjct: 306 AQMGDAEKVLNLFCRMTGSEINFSKFTLSTVLKGCANSGNLRAGQIVHSLAIRIGCELDE 365

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            + C LVDMY+KC + G   D+ KVF R+ D +V+SW+AIIT   Q  G+ +EA ++F  
Sbjct: 366 FISCCLVDMYSKCGLAG---DALKVFVRIEDPDVVSWSAIITCLDQK-GQSREAAEVFKR 421

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    V PN FT AS++ A  +L D    E ++    K G   D+ V N+L++MY + G 
Sbjct: 422 MRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVCNALVTMYMKIGS 481

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ++D  + FE+   ++L+S+N ++  +  N   +    + +++   G   + YTF S+L  
Sbjct: 482 VQDGCRVFEATTNRDLISWNALLSGFHDNETCDTGLRIFNQMLAEGFNPNMYTFISILRS 541

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            SS+  +  G+Q+HA+I+K+  + N  +  AL+ MY++   +E A  +F  +  R++ +W
Sbjct: 542 CSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAW 601

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           T ++ G+A+ G   +A++ F +M  +G+KPN  T  + LS CS    +  G +   SM  
Sbjct: 602 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSG-RQLHSMAI 660

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           + G    M   + +VD+  + G + +A E +    +S D + W T +     HG      
Sbjct: 661 KAGQSGDMFVASALVDMYAKCGCVEDA-EVVFDGLVSRDTVSWNTIICGYSQHGQGGKAL 719

Query: 679 HAAEMILEQ 687
            A E +L++
Sbjct: 720 KAFEAMLDE 728



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 232/437 (53%), Gaps = 22/437 (5%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++A      M   G  P+  T + L+ +     + + G+ +H+ + +   E ++ + 
Sbjct: 410 GQSREAAEVFKRMRHSGVIPNQFTLASLVSAATDLGDLYYGESIHACVCKYGFEYDNTVC 469

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+++Y K G + +  ++F++  N RD++SW++++S + +       + +F +ML  GF
Sbjct: 470 NALVTMYMKIGSVQDGCRVFEATTN-RDLISWNALLSGFHDNETCDTGLRIFNQMLAEGF 528

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN Y F +++R+CS+  +V +G  ++  ++K    D +  VG AL+DM+ K    LE A
Sbjct: 529 NPNMYTFISILRSCSSLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDMYAKNRF-LEDA 586

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +F+++ +++   WT+++    Q G    A++ F+ M   G  P+ FTL+  +S CS +
Sbjct: 587 ETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRI 646

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
               SG+QLHS AI+ G + D+ V  +LVDMYAKC   G V+D+  VFD ++  + +SW 
Sbjct: 647 ATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKC---GCVEDAEVVFDGLVSRDTVSWN 703

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH--A 414
            II GY Q G   K A+K F  M+     P+  TF  VL AC ++    + E+   H  +
Sbjct: 704 TIICGYSQHGQGGK-ALKAFEAMLDEGTVPDEVTFIGVLSACSHM---GLIEEGKKHFNS 759

Query: 415 VKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
           + +   +   + +   ++ +  R+G+  +     E +    N++ + T++ A   + N E
Sbjct: 760 LSKIYGITPTIEHYACMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIE 819

Query: 472 -------KAFELLHEIE 481
                  K FEL  EI+
Sbjct: 820 FGERAAMKLFELEPEID 836



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 43  SEPLSNRLIY------------HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR 90
           +E + NRLI             +  DG+ +KA+     M ++G  P+  T +  L  C R
Sbjct: 586 AETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSR 645

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
                 G+ +HS+  ++    +  + ++L+ +Y+KCG + +A  +F  + + RD VSW++
Sbjct: 646 IATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS-RDTVSWNT 704

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
           +I  Y   G+   A+  F  ML+ G  P+E  F  V+ ACS+
Sbjct: 705 IICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH 746


>gi|356542011|ref|XP_003539465.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 876

 Score =  586 bits (1511), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 313/844 (37%), Positives = 502/844 (59%), Gaps = 19/844 (2%)

Query: 26  QNLPPSSSPPFIAQPTTSEPLS-----NRLIYHLND-GRVQKAIFTLDLMTQKGNHPDLD 79
           + L   S P F  Q     PL      N+L++  +   + Q+A+     + + G  PD  
Sbjct: 44  RTLLRDSDPRFAQQLFDQTPLRDLKQHNQLLFRYSRCDQTQEALHLFVSLYRSGLSPDSY 103

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T S +L  C  S N  +G+ VH    +  L  +  + NSL+ +Y+K G++ +  ++F  M
Sbjct: 104 TMSCVLSVCAGSFNGTVGEQVHCQCVKCGLVHHLSVGNSLVDMYTKTGNVRDGRRVFDEM 163

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
           G+ RD+VSW+S+++ Y           +F  M   G+ P+ Y  S VI A +N   VAIG
Sbjct: 164 GD-RDVVSWNSLLTGYSWNRFNDQVWELFCLMQVEGYRPDYYTVSTVIAALANQGAVAIG 222

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+  ++K G F+++  V  +LI M  K  + L  A  VFD M  K++V W  MI    
Sbjct: 223 MQIHALVVKLG-FETERLVCNSLISMLSKSGM-LRDARVVFDNMENKDSVSWNSMIAGHV 280

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             G   +A   F +M L+G  P   T + V+ +C+ L+     + LH   +++GL+ +  
Sbjct: 281 INGQDLEAFETFNNMQLAGAKPTHATFASVIKSCASLKELGLVRVLHCKTLKSGLSTNQN 340

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
           V  +L+    KC     +DD+  +F  M    +V+SWTA+I+GY+Q+G  D +AV LFS 
Sbjct: 341 VLTALMVALTKCK---EIDDAFSLFSLMHGVQSVVSWTAMISGYLQNGDTD-QAVNLFSL 396

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M +  V PNHFT++++L     +  S    +++   +K        VG +L+  + + G 
Sbjct: 397 MRREGVKPNHFTYSTILTVQHAVFIS----EIHAEVIKTNYEKSSSVGTALLDAFVKIGN 452

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           + DA K FE +  K++++++ M+  YA+   +E+A ++ H++   G+  + +TF S+++ 
Sbjct: 453 ISDAVKVFELIETKDVIAWSAMLAGYAQAGETEEAAKIFHQLTREGIKPNEFTFCSIINA 512

Query: 499 ASS-IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
            ++   ++ +G+Q HA  IK    +  C+ ++L+++Y++  N+E+A ++FK  ++R+++S
Sbjct: 513 CTAPTASVEQGKQFHAYAIKLRLNNALCVSSSLVTLYAKRGNIESAHEIFKRQKERDLVS 572

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W SMI+G+A+HG A +ALE+F +M    ++ + IT+I V+SAC+HAGL+ +G  +F  M 
Sbjct: 573 WNSMISGYAQHGQAKKALEVFEEMQKRNLEVDAITFIGVISACAHAGLVGKGQNYFNIMI 632

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           ++H I   MEHY+CM+DL  R+G L +A++ I  MP      VWR  L A RVH + ELG
Sbjct: 633 NDHHINPTMEHYSCMIDLYSRAGMLGKAMDIINGMPFPPAATVWRIVLAASRVHRNIELG 692

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           K AAE I+  +PQ  AA++LLSN+YA+AG+W    N+RK M +R + KE G SWIE  NK
Sbjct: 693 KLAAEKIISLEPQHSAAYVLLSNIYAAAGNWHEKVNVRKLMDKRRVKKEPGYSWIEVKNK 752

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
            + F  G+ SHP +  IY++L +L  ++++ GY PDTN+V H++E+EQK   L  HSE++
Sbjct: 753 TYSFLAGDLSHPLSDHIYSKLSELNTRLRDVGYQPDTNYVFHDIEDEQKETILSHHSERL 812

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A+AFGLI+T    P+++ KNLRVCGDCH+ IK +S+V  R IV+RDSNRFHH K G CSC
Sbjct: 813 AIAFGLIATLPEIPLQIVKNLRVCGDCHSFIKLVSLVEKRYIVVRDSNRFHHFKGGLCSC 872

Query: 858 NDYW 861
            DYW
Sbjct: 873 GDYW 876


>gi|225440839|ref|XP_002276333.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 705

 Score =  586 bits (1510), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 292/711 (41%), Positives = 443/711 (62%), Gaps = 6/711 (0%)

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           M+  +   G  ++    F E++  G  P+ Y    VIRAC + +N+ +G +I+  + K G
Sbjct: 1   MVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 60

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             D D  V  AL+DM+VK   ++E A  +FDKM E++ V WT+MI    + G   +++ L
Sbjct: 61  -LDLDHFVCAALVDMYVKCR-EIEDARFLFDKMQERDLVTWTVMIGGYAECGKANESLVL 118

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M   G +PD+  +  VV AC++L      + +  +  R    LDV +G +++DMYAK
Sbjct: 119 FEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAMIDMYAK 178

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G V+ +R++FDRM + NV+SW+A+I  Y    G+ ++A+ LF  M+   + P+  T
Sbjct: 179 C---GCVESAREIFDRMEEKNVISWSAMIAAY-GYHGQGRKALDLFRMMLSSGMLPDKIT 234

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
            AS+L AC +L +  +   ++    K G  LD  V  +L+ MY +   +EDAR  F+ + 
Sbjct: 235 LASLLYACSDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCREIEDARFLFDKMP 294

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E++LV++  M+  YA+  N+ ++  L  ++ + GV        +++   + +GA+ K   
Sbjct: 295 ERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKART 354

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           I   I +  F+ +  +  A+I M+++C  VE+A ++F  ME++NVISW++MI  +  HG 
Sbjct: 355 IDDYIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQ 414

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             +AL++F  ML  GI PN IT +++L ACSHAGL+ EG + F  M++++ +   ++HY 
Sbjct: 415 GRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYT 474

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           C+VDLLGR+G L EAL+ I SM +  D  +W  FLGACR H D  L + AA  +LE  PQ
Sbjct: 475 CVVDLLGRAGRLDEALKLIESMTVEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQ 534

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           +P  +ILLSN+YA+AG WE VA  R  M +R L K  G +WIE DNK H+F VG+T+HP+
Sbjct: 535 NPGHYILLSNIYANAGRWEDVAKTRDLMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPR 594

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + EIY  L  L  K++  GY+PDTNFVLH+++EE K+  L+ HSEK+A+AFGLI+T +  
Sbjct: 595 SKEIYEMLKSLGNKLELVGYVPDTNFVLHDVDEELKIGILYSHSEKLAIAFGLIATPEHT 654

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           PIR+ KNLRVCGDCHT  K +S +TGR I++RD+NRFHH K+G CSC DYW
Sbjct: 655 PIRIIKNLRVCGDCHTFCKLVSAITGRVIIVRDANRFHHFKEGACSCGDYW 705



 Score =  251 bits (642), Expect = 9e-64,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 265/487 (54%), Gaps = 8/487 (1%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
           T   + + G  PD  T   ++++C   +N  +G+L+H ++ +  L+ +  +  +L+ +Y 
Sbjct: 17  TFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYV 76

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KC ++ +A  +F  M  +RD+V+W+ MI  Y   GK  +++ +F +M E G  P++    
Sbjct: 77  KCREIEDARFLFDKM-QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMV 135

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            V+ AC+    +    II  ++ +   F  DV +G A+IDM+ K    +ESA ++FD+M 
Sbjct: 136 TVVFACAKLGAMHKARIIDDYIQR-KKFQLDVILGTAMIDMYAKCGC-VESAREIFDRME 193

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           EKN + W+ MI      G  R A+ LF  M+ SG LPD+ TL+ ++ ACS+L+    G+ 
Sbjct: 194 EKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRL 253

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H    + GL LD  V  +LVDMY KC     ++D+R +FD+M + ++++WT +I GY +
Sbjct: 254 IHHIVYKFGLDLDHFVCAALVDMYGKCR---EIEDARFLFDKMPERDLVTWTVMIGGYAE 310

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
            G  + E++ LF  M +  V P+     +V+ AC  L   + A  +  +  ++   LD  
Sbjct: 311 CGNAN-ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVI 369

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G ++I M+A+ G +E AR+ F+ + EKN++S++ M+ AY  +    KA +L   +  +G
Sbjct: 370 LGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSG 429

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAA 543
           +  +  T  SLL   S  G + +G +  + + +     ++   Y  ++ +  R   ++ A
Sbjct: 430 ILPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEA 489

Query: 544 FQVFKEM 550
            ++ + M
Sbjct: 490 LKLIESM 496



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 221/398 (55%), Gaps = 16/398 (4%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+  +++   + M ++G  PD      ++ +C +    H  +++   + R K + + ++ 
Sbjct: 110 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 169

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++I +Y+KCG +  A +IF  M  +++++SWS+MI++Y   G+   A+ +F  ML  G 
Sbjct: 170 TAMIDMYAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 228

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++   ++++ ACS+ +N+ +G +I+  + K G  D D  V  AL+DM+ K   ++E A
Sbjct: 229 LPDKITLASLLYACSDLKNLQMGRLIHHIVYKFG-LDLDHFVCAALVDMYGKCR-EIEDA 286

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +FDKM E++ V WT+MI    + G   +++ LF  M   G +PD+  +  VV AC++L
Sbjct: 287 RFLFDKMPERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMVTVVFACAKL 346

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                 + +  +  R    LDV +G +++DM+AKC   G V+ +R++FDRM + NV+SW+
Sbjct: 347 GAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC---GCVESAREIFDRMEEKNVISWS 403

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT---- 412
           A+I  Y    G+ ++A+ LF  M++  + PN  T  S+L AC +        + ++    
Sbjct: 404 AMIAAY-GYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSLMWE 462

Query: 413 -HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
            ++V+       CV    + +  R+GR+++A K  ES+
Sbjct: 463 DYSVRADVKHYTCV----VDLLGRAGRLDEALKLIESM 496



 Score =  139 bits (349), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 156/301 (51%), Gaps = 18/301 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           YH   G+ +KA+    +M   G  PD  T + LL +C   +N  +G+L+H ++ +  L+ 
Sbjct: 209 YH---GQGRKALDLFRMMLSSGMLPDKITLASLLYACSDLKNLQMGRLIHHIVYKFGLDL 265

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +  +L+ +Y KC ++ +A  +F  M  +RD+V+W+ MI  Y   G   +++ +F +M
Sbjct: 266 DHFVCAALVDMYGKCREIEDARFLFDKM-PERDLVTWTVMIGGYAECGNANESLVLFDKM 324

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            E G  P++     V+ AC+    +     I  ++ +   F  DV +G A+IDM  K   
Sbjct: 325 REEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQR-KKFQLDVILGTAMIDMHAKCGC 383

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +ESA ++FD+M EKN + W+ MI      G  R A+ LF  M+ SG LP++ TL  ++ 
Sbjct: 384 -VESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 442

Query: 292 ACSELELFTSGKQLHS-----WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ACS   L   G +  S     +++R  +    CV    VD+  +    G +D++ K+ + 
Sbjct: 443 ACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV----VDLLGRA---GRLDEALKLIES 495

Query: 347 M 347
           M
Sbjct: 496 M 496



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 101/203 (49%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +++   D M ++G  PD      ++ +C +    H  + +   + R K + + ++ 
Sbjct: 312 GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 371

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++I +++KCG +  A +IF  M  +++++SWS+MI++Y   G+   A+ +F  ML  G 
Sbjct: 372 TAMIDMHAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 430

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN+    +++ ACS+   V  G   +  + +     +DV     ++D+  +    L+ A
Sbjct: 431 LPNKITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAG-RLDEA 489

Query: 237 YKVFDKMT-EKNTVGWTLMITRC 258
            K+ + MT EK+   W   +  C
Sbjct: 490 LKLIESMTVEKDEGLWGAFLGAC 512


>gi|449491572|ref|XP_004158941.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g09950-like [Cucumis sativus]
          Length = 1004

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 293/802 (36%), Positives = 483/802 (60%), Gaps = 7/802 (0%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G    +I+    M  +G  P+  T +  LK+C       LGK +H+   +  L  +  +
Sbjct: 191 EGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALDLGKQMHAQAFKLGLLLDLFV 250

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++L+ LY+KCG++  A+K+F  M  + D V+W+ +++ Y  RG     + +F  M+EL 
Sbjct: 251 GSALVDLYAKCGEIELASKMFIGMPEQND-VTWNVLLNGYAQRGDVTGVLKLFCSMMELD 309

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
              NE+  + V++ C+N++N+  G +I+  ++KCGY + +  +GC L+DM+ K  + ++ 
Sbjct: 310 VKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGY-EGNEFIGCGLVDMYSKCGLAID- 367

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VF  + + + V W+ +IT   Q G   ++I+LF  M L   LP+++T+  ++SA + 
Sbjct: 368 AIGVFKTIKKPDIVVWSALITCLDQQGQSEESIKLFHLMRLGDTLPNQYTICSLLSAATN 427

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 G+ +H+   + G   DV V  +LV MY K   +G V D  K+++ M+D +++SW
Sbjct: 428 TGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMK---NGCVHDGTKLYESMVDRDLISW 484

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A ++G    G  D+  + +F  M++    PN +TF S+L +C  L D +   QV+ H +
Sbjct: 485 NAYLSGLHDCGMYDR-PLTIFYHMLEEGFIPNMYTFISILGSCSCLFDVHYGRQVHAHII 543

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K     ++ V  +LI MYA+   +EDA  AF  L  ++L ++  ++  YA+    EKA  
Sbjct: 544 KNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFTWTVIITNYAQTNQGEKALN 603

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
              +++  GV  + +T A  LSG SS+ ++  G+Q+H+ + KSG  S+  + +AL+ MY+
Sbjct: 604 YFRQMQQEGVKPNEFTLAGCLSGCSSLASLEGGQQLHSMVFKSGHVSDMFVGSALVDMYA 663

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  +E A  +F+ +  R+ I+W ++I G+A++G   +AL  F  ML +GI P+G+T+  
Sbjct: 664 KCGCMEEAEALFEALIRRDTIAWNTIICGYAQNGQGNKALTAFRMMLDEGISPDGVTFTG 723

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LSACSH GL+ EG +HF SMY + GI   ++H ACMVD+LGR G   E  +FI+ M LS
Sbjct: 724 ILSACSHQGLVEEGKEHFNSMYRDFGISPTVDHCACMVDILGRVGKFDELEDFIQKMQLS 783

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            + L+W T LGA ++H +  LG+ AA  + E  P++ +++ILLSN++A+ G W+ V  +R
Sbjct: 784 QNALIWETVLGASKMHNNLVLGEKAANKLFELQPEEESSYILLSNIFATEGRWDDVKRVR 843

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             M  + + KE GCSW+EA+ +VH F   + SHP+  EI+ +LD+L  ++    Y+P T 
Sbjct: 844 SLMSSKGVKKEPGCSWVEANGQVHTFVSHDYSHPQIQEIHLKLDELDRELASIQYVPKTE 903

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
           +VLH + E +K + L  HSE++A+ F LISTS  K IR+FKNLR+C DCH  +K+IS +T
Sbjct: 904 YVLHNVGETEKKENLRFHSERLALGFALISTSSEKKIRIFKNLRICRDCHDVMKHISSIT 963

Query: 836 GREIVLRDSNRFHHIKDGKCSC 857
            +EIV+RD  RFHH K+G CSC
Sbjct: 964 NQEIVVRDVRRFHHFKNGACSC 985



 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 182/610 (29%), Positives = 315/610 (51%), Gaps = 9/610 (1%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L  YS +L+ C   R+  + K +H L+ +  + P+S +  SL+++Y+KC     A  +  
Sbjct: 112 LKYYSSMLRECASKRSLGVAKAIHGLIVKDVINPDSHLWVSLVNVYAKCRYSAYARLVLA 171

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M + RD+VSW+++I   V  G   D+I++F EM   G  PNE+  +  ++ACS    + 
Sbjct: 172 KMPD-RDVVSWTALIQGLVAEGFANDSIYLFQEMQNEGIMPNEFTLATGLKACSLCMALD 230

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +G  ++    K G    D+ VG AL+D++ K   ++E A K+F  M E+N V W +++  
Sbjct: 231 LGKQMHAQAFKLGLL-LDLFVGSALVDLYAKCG-EIELASKMFIGMPEQNDVTWNVLLNG 288

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G     ++LF  M+      + FTL+ V+  C+  +    G+ +HS  I+ G   +
Sbjct: 289 YAQRGDVTGVLKLFCSMMELDVKCNEFTLTTVLKGCANSKNLKQGQVIHSLIIKCGYEGN 348

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             +GC LVDMY+KC   G   D+  VF  +   +++ W+A+IT   Q  G+ +E++KLF 
Sbjct: 349 EFIGCGLVDMYSKC---GLAIDAIGVFKTIKKPDIVVWSALITCLDQQ-GQSEESIKLFH 404

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M  G   PN +T  S+L A  N  +    + ++    K G   D  V N+L++MY ++G
Sbjct: 405 LMRLGDTLPNQYTICSLLSAATNTGNLQYGQSIHACVWKYGFETDVAVSNALVTMYMKNG 464

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            + D  K +ES+ +++L+S+N  +         ++   + + + + G   + YTF S+L 
Sbjct: 465 CVHDGTKLYESMVDRDLISWNAYLSGLHDCGMYDRPLTIFYHMLEEGFIPNMYTFISILG 524

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             S +  +  G Q+HA IIK+  + N+ +  ALI MY++C  +E A   F  +  R++ +
Sbjct: 525 SCSCLFDVHYGRQVHAHIIKNQLDDNNFVCTALIDMYAKCMYLEDADVAFNRLSVRDLFT 584

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           WT +IT +A+     +AL  F +M  +G+KPN  T    LS CS    + EG +   SM 
Sbjct: 585 WTVIITNYAQTNQGEKALNYFRQMQQEGVKPNEFTLAGCLSGCSSLASL-EGGQQLHSMV 643

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            + G V  M   + +VD+  + G + EA     ++ +  D + W T +     +G     
Sbjct: 644 FKSGHVSDMFVGSALVDMYAKCGCMEEAEALFEAL-IRRDTIAWNTIICGYAQNGQGNKA 702

Query: 678 KHAAEMILEQ 687
             A  M+L++
Sbjct: 703 LTAFRMMLDE 712


>gi|328774749|gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score =  585 bits (1507), Expect = e-164,   Method: Compositional matrix adjust.
 Identities = 296/721 (41%), Positives = 449/721 (62%), Gaps = 8/721 (1%)

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           K D ++ S  +S    +G+  +A+ +   M+  G       F  +++ C+   ++  G  
Sbjct: 58  KVDTLANSGDVSILCKQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGRE 117

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++  +LK G    +  +   L+ M+ K GS  L  A +VFD + ++N V WT MI     
Sbjct: 118 VHAAILKSG-IQPNRYLENTLLSMYAKCGS--LTDARRVFDGIRDRNIVSWTAMIEAFVA 174

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                +A + +  M L+G  PD+ T   +++A +  EL   G+++H    + GL L+  V
Sbjct: 175 GNQNLEAYKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAGLELEPRV 234

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           G SLV MYAKC   G +  ++ +FD++ + NV++WT +I GY Q G  D  A++L   M 
Sbjct: 235 GTSLVGMYAKC---GDISKAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDV-ALELLEKMQ 290

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           Q +VAPN  T+ S+L+ C   L     ++V+ + ++ G   +  V N+LI+MY + G ++
Sbjct: 291 QAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLK 350

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +ARK F  L  +++V++  MV  YA+    ++A +L   ++  G+     TF S L+  S
Sbjct: 351 EARKLFGDLPHRDVVTWTAMVTGYAQLGFHDEAIDLFRRMQQQGIKPDKMTFTSALTSCS 410

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           S   + +G+ IH +++ +G+  +  + +AL+SMY++C +++ A  VF +M +RNV++WT+
Sbjct: 411 SPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTA 470

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MITG A+HG    ALE F +M   GIKP+ +T+ +VLSAC+H GL+ EG KHFRSMY ++
Sbjct: 471 MITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDY 530

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI   +EHY+C VDLLGR+G L EA   I +MP      VW   L ACR+H D E G+ A
Sbjct: 531 GIKPMVEHYSCFVDLLGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERA 590

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE +L+ DP D  A++ LSN+YA+AG +E    +R+ M++R+++KE G SWIE D KVH 
Sbjct: 591 AENVLKLDPDDDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVVKEPGQSWIEVDGKVHV 650

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           FHV + SHP+  EIYAEL +L  +IKE GY+PDT FVLH+++EEQKVQ L  HSE++A+ 
Sbjct: 651 FHVEDKSHPEAKEIYAELGKLTEQIKEQGYVPDTRFVLHDVDEEQKVQTLCSHSERLAIT 710

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           +GL+ T    PIR+ KNLRVCGDCHTA K+IS V GREI+ RD++RFHH  DG CSC D+
Sbjct: 711 YGLMKTPPGTPIRIVKNLRVCGDCHTASKFISKVVGREIIARDAHRFHHFVDGVCSCGDF 770

Query: 861 W 861
           W
Sbjct: 771 W 771



 Score =  265 bits (677), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 160/572 (27%), Positives = 300/572 (52%), Gaps = 11/572 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
             GR+++A+  L+ M  +G     D +  LL+ C R R+   G+ VH+ + +S ++PN  
Sbjct: 73  KQGRLKEALGILNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRY 132

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+S+Y+KCG L +A ++F  + + R+IVSW++MI ++V   + ++A   +  M   
Sbjct: 133 LENTLLSMYAKCGSLTDARRVFDGIRD-RNIVSWTAMIEAFVAGNQNLEAYKCYETMKLA 191

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P++  F +++ A +N E + +G  ++  + K G  + +  VG +L+ M+ K   D+ 
Sbjct: 192 GCKPDKVTFVSLLNAFTNPELLQVGQKVHMEIAKAG-LELEPRVGTSLVGMYAKCG-DIS 249

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +FDK+ EKN V WTL+I    Q G    A+ L   M  +   P++ T + ++  C+
Sbjct: 250 KAQVIFDKLPEKNVVTWTLLIAGYAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCT 309

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                  GK++H + I++G   ++ V  +L+ MY KC   G + ++RK+F  +   +V++
Sbjct: 310 TPLALEHGKKVHRYIIQSGYGREIWVVNALITMYCKC---GGLKEARKLFGDLPHRDVVT 366

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA++TGY Q G  D EA+ LF  M Q  + P+  TF S L +C +       + ++   
Sbjct: 367 WTAMVTGYAQLGFHD-EAIDLFRRMQQQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQL 425

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           V  G +LD  + ++L+SMYA+ G M+DAR  F  + E+N+V++  M+   A++    +A 
Sbjct: 426 VHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNVVAWTAMITGCAQHGRCREAL 485

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISM 533
           E   +++  G+     TF S+LS  + +G + +G +   +  +  G +     Y+  + +
Sbjct: 486 EYFEQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDL 545

Query: 534 YSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
             R  ++E A  V   M  +   S W ++++    H    R       +L      +G  
Sbjct: 546 LGRAGHLEEAENVILTMPFQPGPSVWGALLSACRIHSDVERGERAAENVLKLDPDDDG-A 604

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           Y+A+ +  + AG   +  K  R + ++  +V+
Sbjct: 605 YVALSNIYAAAGRYEDAEK-VRQVMEKRDVVK 635



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/406 (29%), Positives = 200/406 (49%), Gaps = 47/406 (11%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G+V  A+  L+ M Q    P+  TY+ +L+ C        GK VH  + +S     
Sbjct: 273 YAQQGQVDVALELLEKMQQAEVAPNKITYTSILQGCTTPLALEHGKKVHRYIIQSGYGRE 332

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             ++N+LI++Y KCG L EA K+F  + + RD+V+W++M++ Y   G   +AI +F  M 
Sbjct: 333 IWVVNALITMYCKCGGLKEARKLFGDLPH-RDVVTWTAMVTGYAQLGFHDEAIDLFRRMQ 391

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G  P++  F++ + +CS+   +  G  I+  L+  GY   DV +  AL+ M+ K GS+
Sbjct: 392 QQGIKPDKMTFTSALTSCSSPAFLQEGKSIHQQLVHAGY-SLDVYLQSALVSMYAKCGSM 450

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A  VF++M+E+N V WT MIT C Q G  R+A+  F  M   G  PD+ T + V+S
Sbjct: 451 D--DARLVFNQMSERNVVAWTAMITGCAQHGRCREALEYFEQMKKQGIKPDKVTFTSVLS 508

Query: 292 ACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LD 349
           AC+ + L   G K   S  +  G+   V      VD+  +    G ++++  V   M   
Sbjct: 509 ACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRA---GHLEEAENVILTMPFQ 565

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
                W A+++           A ++ SD+ +G+ A       +VLK     LD +    
Sbjct: 566 PGPSVWGALLS-----------ACRIHSDVERGERAAE-----NVLK-----LDPD---- 600

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
                       DD    +L ++YA +GR EDA K  + + ++++V
Sbjct: 601 ------------DDGAYVALSNIYAAAGRYEDAEKVRQVMEKRDVV 634


>gi|168003497|ref|XP_001754449.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162694551|gb|EDQ80899.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 723

 Score =  582 bits (1501), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 299/734 (40%), Positives = 451/734 (61%), Gaps = 16/734 (2%)

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
           N   +  +++ N RD+       S     G+  +A+ +   M+  G       F  +++ 
Sbjct: 4   NAGFRKVETLANSRDV-------SVLCKTGRLKEALGIMNTMILQGTRVYSDVFRGLLQE 56

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNT 248
           C+   ++  G  ++  +LK G    +  +   L+ M+ K GS  L  A +VFD + ++N 
Sbjct: 57  CARLRSLEQGREVHAAILKSG-IQPNRYLENTLLSMYAKCGS--LTDARRVFDSIRDRNI 113

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V WT MI          +A + +  M L+G  PD+ T   +++A +  EL   G+++H  
Sbjct: 114 VSWTAMIEAFVAGNKNLEAFKCYETMKLAGCKPDKVTFVSLLNAFTNPELLQLGQKVHME 173

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +  GL L+  VG SLV MYAKC   G +  +R +FDR+ + NV++WT +I GY Q G  
Sbjct: 174 IVEAGLELEPRVGTSLVGMYAKC---GDISKARVIFDRLPEKNVVTWTLLIAGYAQQGQV 230

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           D  A++L   M Q +VAPN  TFAS+L+ C         ++V+ + ++ G   +  V NS
Sbjct: 231 DV-ALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRELWVVNS 289

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI+MY + G +E+ARK F  L  +++V++  MV  YA+    ++A  L   ++  G+   
Sbjct: 290 LITMYCKCGGLEEARKLFSDLPHRDVVTWTAMVTGYAQLGFHDEAINLFRRMQQQGIKPD 349

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             TF S+L+  SS   + +G++IH +++ +G+  +  + +AL+SMY++C +++ A  VF 
Sbjct: 350 KMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGYNLDVYLQSALVSMYAKCGSMDDASLVFN 409

Query: 549 EMEDRNVISWTSMITGF-AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           +M +RNV++WT++ITG  A+HG    ALE F +M   GIKP+ +T+ +VLSAC+H GL+ 
Sbjct: 410 QMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVLSACTHVGLVE 469

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           EG KHFRSMY ++GI   +EHY+C VDLLGR+G L EA   I SMP      VW   L A
Sbjct: 470 EGRKHFRSMYLDYGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSA 529

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
           CRVH D E G+ AAE +L+ DP D  A++ LS++YA+AG +E    +R+ M++R+++KE 
Sbjct: 530 CRVHSDVERGERAAENVLKLDPDDDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVVKEP 589

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
           G SWIE D KVH FHV + SHP++ +IY EL +L  +IKE GY+PDT FVLH+++EEQK 
Sbjct: 590 GQSWIEVDGKVHVFHVEDKSHPESEQIYVELGKLTEQIKEMGYVPDTRFVLHDVDEEQKE 649

Query: 788 QYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRF 847
           + LF HSE++A+ +GL+ T    PIR+ KNLRVCGDCHTA K+IS V GREI+ RD+ RF
Sbjct: 650 RILFSHSERLAITYGLMKTPPGMPIRIVKNLRVCGDCHTATKFISKVVGREIIARDAQRF 709

Query: 848 HHIKDGKCSCNDYW 861
           HH  DG CSC D+W
Sbjct: 710 HHFADGVCSCGDFW 723



 Score =  259 bits (662), Expect = 4e-66,   Method: Compositional matrix adjust.
 Identities = 160/571 (28%), Positives = 302/571 (52%), Gaps = 12/571 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR+++A+  ++ M  +G     D +  LL+ C R R+   G+ VH+ + +S ++PN  + 
Sbjct: 26  GRLKEALGIMNTMILQGTRVYSDVFRGLLQECARLRSLEQGREVHAAILKSGIQPNRYLE 85

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+S+Y+KCG L +A ++F S+ + R+IVSW++MI ++V   K ++A   +  M   G 
Sbjct: 86  NTLLSMYAKCGSLTDARRVFDSIRD-RNIVSWTAMIEAFVAGNKNLEAFKCYETMKLAGC 144

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++  F +++ A +N E + +G  ++  +++ G  + +  VG +L+ M+ K   D+  A
Sbjct: 145 KPDKVTFVSLLNAFTNPELLQLGQKVHMEIVEAG-LELEPRVGTSLVGMYAKCG-DISKA 202

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +FD++ EKN V WTL+I    Q G    A+ L   M  +   P++ T + ++  C+  
Sbjct: 203 RVIFDRLPEKNVVTWTLLIAGYAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTP 262

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GK++H + I++G   ++ V  SL+ MY KC   G ++++RK+F  +   +V++WT
Sbjct: 263 AALEHGKKVHRYIIQSGYGRELWVVNSLITMYCKC---GGLEEARKLFSDLPHRDVVTWT 319

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A++TGY Q G  D EA+ LF  M Q  + P+  TF SVL +C +       ++++   V 
Sbjct: 320 AMVTGYAQLGFHD-EAINLFRRMQQQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVH 378

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA-YAKNLNSEKAFE 475
            G  LD  + ++L+SMYA+ G M+DA   F  + E+N+V++  ++    A++    +A E
Sbjct: 379 AGYNLDVYLQSALVSMYAKCGSMDDASLVFNQMSERNVVAWTAIITGCCAQHGRCREALE 438

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMY 534
              +++  G+     TF S+LS  + +G + +G +   +  +  G +     Y+  + + 
Sbjct: 439 YFDQMKKQGIKPDKVTFTSVLSACTHVGLVEEGRKHFRSMYLDYGIKPMVEHYSCFVDLL 498

Query: 535 SRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
            R  ++E A  V   M      S W ++++    H    R       +L      +G  Y
Sbjct: 499 GRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGERAAENVLKLDPDDDG-AY 557

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +A+ S  + AG   +  K  R + ++  +V+
Sbjct: 558 VALSSIYAAAGRYEDAEK-VRQVMEKRDVVK 587



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 196/406 (48%), Gaps = 46/406 (11%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G+V  A+  L+ M Q    P+  T++ +L+ C        GK VH  + +S     
Sbjct: 224 YAQQGQVDVALELLETMQQAEVAPNKITFASILQGCTTPAALEHGKKVHRYIIQSGYGRE 283

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             ++NSLI++Y KCG L EA K+F  + + RD+V+W++M++ Y   G   +AI++F  M 
Sbjct: 284 LWVVNSLITMYCKCGGLEEARKLFSDLPH-RDVVTWTAMVTGYAQLGFHDEAINLFRRMQ 342

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G  P++  F++V+ +CS+   +  G  I+  L+  GY + DV +  AL+ M+ K GS+
Sbjct: 343 QQGIKPDKMTFTSVLTSCSSPAFLQEGKRIHQQLVHAGY-NLDVYLQSALVSMYAKCGSM 401

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITR-CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           D   A  VF++M+E+N V WT +IT  C Q G  R+A+  F  M   G  PD+ T + V+
Sbjct: 402 D--DASLVFNQMSERNVVAWTAIITGCCAQHGRCREALEYFDQMKKQGIKPDKVTFTSVL 459

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LD 349
           SAC+ +                                      G V++ RK F  M LD
Sbjct: 460 SACTHV--------------------------------------GLVEEGRKHFRSMYLD 481

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           + +       + +V   GR     +  + ++     P    + ++L AC    D    E+
Sbjct: 482 YGIKPMVEHYSCFVDLLGRAGHLEEAENVILSMPFIPGPSVWGALLSACRVHSDVERGER 541

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
              + +K     DD    +L S+YA +GR EDA K  + + ++++V
Sbjct: 542 AAENVLKLDPD-DDGAYVALSSIYAAAGRYEDAEKVRQVMEKRDVV 586


>gi|449443608|ref|XP_004139569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  581 bits (1497), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 318/849 (37%), Positives = 501/849 (59%), Gaps = 26/849 (3%)

Query: 26  QNLP---PSSSPPFIAQPTTSEPLS-----NRLIYHLN-DGRVQKAIFTLDLMTQKGNHP 76
           Q+LP     S P +  Q     PL      NRL++  + +   ++A+     +   G   
Sbjct: 43  QSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGV 102

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  T S  LK C    +  +G+ VH    +S    +  +  SL+ +Y K  D  +   IF
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             MG K ++VSW+S++S Y   G   + IH+  +M   G  PN + F+ V+ A ++   +
Sbjct: 163 DEMGIK-NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESII 221

Query: 197 AIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
             G  ++  ++K G+ F + VC   ALI M++K  + +  A  VFD M  +++V W +MI
Sbjct: 222 EGGVQVHAMIVKNGFEFTTFVC--NALICMYLKSEM-VGDAEAVFDSMVVRDSVTWNIMI 278

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
                +G   +  ++F  M L+G    R      +  CS+       KQLH   ++ G  
Sbjct: 279 GGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD--HNVMSWTAIITGYVQSGGRDKEAV 373
               +  +L+  Y+KC+   SVD++ K+F  M D  HNV++WTA+I G+VQ+   +K AV
Sbjct: 339 FAQDIRTALMVTYSKCS---SVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNNNNEK-AV 393

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            LF  M +  V PNHFT+++VL        S++  Q++   +K        V  +L+  Y
Sbjct: 394 DLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVPSVATALLDAY 449

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            ++G + ++ + F S+  K++V+++ M+   A+  +SEKA E+  ++   GV  + YTF+
Sbjct: 450 VKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFS 509

Query: 494 SLLSGASSIGA-IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           S+++  SS  A +  G+QIHA  +KSG  +  C+ +AL++MYS+  N+E+A +VF   E+
Sbjct: 510 SVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEE 569

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           R+++SW SMITG+ +HG A +ALE+F  M   G+  + +T+I VL+AC+HAGL+ EG K+
Sbjct: 570 RDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKY 629

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F  M  ++ I +++EHY+CMVDL  R+G   +A++ I  MP  A   +WRT L ACRVH 
Sbjct: 630 FNIMIKDYHIDKKIEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHR 689

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           + ELGK AAE ++   P D   ++LLSN++A AG+WE  A++RK M ER + KEAGCSWI
Sbjct: 690 NLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E  N++  F  G+ SHP +  +YA+L++L++K+K+ GY PDTN+V H++EEE K   L Q
Sbjct: 750 EIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQ 809

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSE++A+A+GLI+     PI++ KNLR+CGDCH  I+ IS++  R +++RDSNRFHH K 
Sbjct: 810 HSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKG 869

Query: 853 GKCSCNDYW 861
           G CSC  YW
Sbjct: 870 GVCSCGGYW 878


>gi|357149883|ref|XP_003575265.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 877

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 299/766 (39%), Positives = 459/766 (59%), Gaps = 6/766 (0%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            G  +H+L   + L  +  + N+L+++Y   G ++EA  +F   G +R+ VSW+ ++S+Y
Sbjct: 118 FGTQLHALAMATGLGGDIFVANALVAMYGGFGFVDEARMVFDEAGCERNTVSWNGLMSAY 177

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           V   +   A+ +F EM+  G  PNE+ FS V+ AC+ + ++  G  ++  +++ GY D D
Sbjct: 178 VKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGY-DKD 236

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           V    AL+DM+ K   D+  A  VF K+ E + V W   I+ C   G  + A+ L L M 
Sbjct: 237 VFTANALVDMYSKLG-DIRMAAVVFGKVPETDVVSWNAFISGCVLHGHDQHALELLLQMK 295

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
            SG +P+ FTLS ++ AC+    F  G+Q+H + ++     D  +   LVDMYAK    G
Sbjct: 296 SSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAK---HG 352

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            +DD++KVFD +   +++ W A+I+G    G +  EA+ LF  M +     N  T A+VL
Sbjct: 353 LLDDAKKVFDWIPQRDLVLWNALISG-CSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           K+  +L   +   QV+  A K G   D  V N LI  Y +   +  A + FE     +++
Sbjct: 412 KSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDII 471

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           ++ +M+ A ++  + E A +L  E+   G+    +  +SLL+  +S+ A  +G+Q+HA +
Sbjct: 472 AFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHAHL 531

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           IK  F S+    NAL+  Y++C ++E A   F  + ++ V+SW++MI G A+HG   RAL
Sbjct: 532 IKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKRAL 591

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           ++F++M+ + I PN IT  +VL AC+HAGL+ E  ++F SM +  GI +  EHYACM+DL
Sbjct: 592 DVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMIDL 651

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           LGR+G L +A+E + SMP   +  VW   L A RVH D ELG+ AAE +   +P+    H
Sbjct: 652 LGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDPELGRLAAEKLFILEPEKSGTH 711

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           +LL+N YASAG W+ VA +RK MK+  + KE   SW+E  +KVH F VG+ SHP+  +IY
Sbjct: 712 VLLANTYASAGMWDDVAKVRKLMKDSKVKKEPAMSWVELKDKVHTFIVGDKSHPRARDIY 771

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVF 815
           A+LD+L   + + GY+P+    LH++++ +K   L  HSE++AVAF LIST    PIRV 
Sbjct: 772 AKLDELGDLMTKAGYVPNVEVDLHDVDKNEKELLLSHHSERLAVAFALISTPAGAPIRVK 831

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KNLR+C DCH A K+IS +  REI++RD NRFHH +DG CSC DYW
Sbjct: 832 KNLRICRDCHAAFKFISDIVSREIIIRDINRFHHFRDGACSCRDYW 877



 Score =  243 bits (619), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 178/648 (27%), Positives = 315/648 (48%), Gaps = 22/648 (3%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L+T   LL     +++   G  +H+ L +S L   +V  N L+S YSKC     A ++F 
Sbjct: 4   LETIGPLLTRYAATQSLLQGAHIHAHLLKSGL--FAVFRNHLLSFYSKCRLPGSARRVFD 61

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            + +    VSWSS++++Y N     DA+  F  M       NE+    V++      +  
Sbjct: 62  EIPDPCH-VSWSSLVTAYSNNAMPRDALGAFRSMRSCSVRCNEFVLPVVLKC---APDAG 117

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMIT 256
            G  ++   +  G    D+ V  AL+ M+  G   ++ A  VFD+   E+NTV W  +++
Sbjct: 118 FGTQLHALAMATG-LGGDIFVANALVAMY-GGFGFVDEARMVFDEAGCERNTVSWNGLMS 175

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              +      A+++F +M+  G  P+ F  S VV+AC+      +G+++H+  IRTG   
Sbjct: 176 AYVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDK 235

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           DV    +LVDMY+K    G +  +  VF ++ + +V+SW A I+G V   G D+ A++L 
Sbjct: 236 DVFTANALVDMYSKL---GDIRMAAVVFGKVPETDVVSWNAFISGCVLH-GHDQHALELL 291

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M    + PN FT +S+LKAC      N+  Q++   VK     D+ +   L+ MYA+ 
Sbjct: 292 LQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIAFGLVDMYAKH 351

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G ++DA+K F+ + +++LV +N ++   +      +A  L   +   G   +  T A++L
Sbjct: 352 GLLDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVL 411

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              +S+ AI    Q+HA   K GF S+  + N LI  Y +C  +  A++VF++    ++I
Sbjct: 412 KSTASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDCLNYAYRVFEKHGSYDII 471

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           ++TSMIT  ++      A+++F +ML  G+ P+     ++L+AC+      +G K   + 
Sbjct: 472 AFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQG-KQVHAH 530

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +   +  +     +V    + GS+ +A      +P    V+ W   +G    HG    
Sbjct: 531 LIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLP-EKGVVSWSAMIGGLAQHGH--- 586

Query: 677 GKHAAEMILEQ-DPQDPAAHILLSNLYASAGHWEYVANIRK---RMKE 720
           GK A ++     D      HI ++++  +  H   V   ++    MKE
Sbjct: 587 GKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634



 Score =  238 bits (606), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 272/518 (52%), Gaps = 9/518 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ + R   A+     M   G  P+   +S ++ +C  SR+   G+ VH+++ R+  + +
Sbjct: 177 YVKNDRCSHAVKVFGEMVWGGVQPNEFGFSCVVNACTGSRDLEAGRKVHAMVIRTGYDKD 236

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+L+ +YSK GD+  A  +F  +  + D+VSW++ IS  V  G    A+ + ++M 
Sbjct: 237 VFTANALVDMYSKLGDIRMAAVVFGKV-PETDVVSWNAFISGCVLHGHDQHALELLLQMK 295

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN +  S++++AC+ +    +G  I+GF++K    DSD  +   L+DM+ K  + 
Sbjct: 296 SSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANA-DSDNYIAFGLVDMYAKHGL- 353

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A KVFD + +++ V W  +I+ C+      +A+ LF  M   GF  +R TL+ V+ +
Sbjct: 354 LDDAKKVFDWIPQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGFDVNRTTLAAVLKS 413

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + LE  +  +Q+H+ A + G   D  V   L+D Y KC     ++ + +VF++   +++
Sbjct: 414 TASLEAISDTRQVHALAEKLGFLSDSHVVNGLIDSYWKCDC---LNYAYRVFEKHGSYDI 470

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +++T++IT   Q     ++A+KLF +M++  + P+ F  +S+L AC +L      +QV+ 
Sbjct: 471 IAFTSMITALSQC-DHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASLSAYEQGKQVHA 529

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +KR    D   GN+L+  YA+ G +EDA  AF  L EK +VS++ M+   A++ + ++
Sbjct: 530 HLIKRQFMSDVFAGNALVYTYAKCGSIEDADLAFSGLPEKGVVSWSAMIGGLAQHGHGKR 589

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALI 531
           A ++ H + D  +  +  T  S+L   +  G + + ++    + +  G E     Y  +I
Sbjct: 590 ALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKEMFGIERTEEHYACMI 649

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            +  R   ++ A ++   M    N   W +++     H
Sbjct: 650 DLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVH 687



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 236/451 (52%), Gaps = 25/451 (5%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  Q A+  L  M   G  P++ T S +LK+C  S  F+LG+ +H  + ++  + ++ I 
Sbjct: 282 GHDQHALELLLQMKSSGLVPNVFTLSSILKACAGSGAFNLGRQIHGFMVKANADSDNYIA 341

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
             L+ +Y+K G L++A K+F  +  +RD+V W+++IS   +  +  +A+ +F  M + GF
Sbjct: 342 FGLVDMYAKHGLLDDAKKVFDWI-PQRDLVLWNALISGCSHGAQHAEALSLFCRMRKEGF 400

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             N    +AV+++ ++ E ++    ++    K G+  SD  V   LID + K    L  A
Sbjct: 401 DVNRTTLAAVLKSTASLEAISDTRQVHALAEKLGFL-SDSHVVNGLIDSYWKCDC-LNYA 458

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           Y+VF+K    + + +T MIT  +Q     DAI+LF++M+  G  PD F LS +++AC+ L
Sbjct: 459 YRVFEKHGSYDIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLDPDPFVLSSLLNACASL 518

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
             +  GKQ+H+  I+     DV  G +LV  YAKC   GS++D+   F  + +  V+SW+
Sbjct: 519 SAYEQGKQVHAHLIKRQFMSDVFAGNALVYTYAKC---GSIEDADLAFSGLPEKGVVSWS 575

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH--- 413
           A+I G  Q  G  K A+ +F  M+   ++PNH T  SVL AC +    + A++ +     
Sbjct: 576 AMIGGLAQH-GHGKRALDVFHRMVDEHISPNHITMTSVLCACNHAGLVDEAKRYFNSMKE 634

Query: 414 --AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMV-------DA 463
              ++R      C    +I +  R+G+++DA +   S+ F+ N   +  ++       D 
Sbjct: 635 MFGIERTEEHYAC----MIDLLGRAGKLDDAMELVNSMPFQTNAAVWGALLAASRVHRDP 690

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
               L +EK F L  E   T V   A T+AS
Sbjct: 691 ELGRLAAEKLFILEPEKSGTHV-LLANTYAS 720


>gi|328774761|gb|AEB39780.1| pentatricopeptide repeat protein 45 [Funaria hygrometrica]
          Length = 1097

 Score =  580 bits (1496), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 311/809 (38%), Positives = 477/809 (58%), Gaps = 14/809 (1%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
            GR Q+A      M ++G  P+  TY  +L +   +      K VHS    + L  +  + 
Sbjct: 299  GRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGALEWVKEVHSHAVNAGLALDLRVG 358

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            N+L+ +Y+K G +++A  +F  M  +RDI SW+ MI      G+  +A  +F++M   G 
Sbjct: 359  NALVHMYAKSGSIDDARVVFDGM-TERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGC 417

Query: 177  CPNEYCFSAVIRACSNTENVAIG--HIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
             PN   + +++ A +     A+    +++    + G F SD+ +G ALI M+ K GS+D 
Sbjct: 418  LPNLTTYLSILNASAIASTSALEWVKVVHKHAEEAG-FISDLRIGNALIHMYAKCGSID- 475

Query: 234  ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
              A  VFD M +++ + W  M+    Q GC  +A  +FL M   G +PD  T   +++  
Sbjct: 476  -DARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTVFLQMQQEGLVPDSTTYLSLLNTH 534

Query: 294  SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
               +      ++H  A+ TGL  D  VG + + MY +C   GS+DD+R +FD++   +V 
Sbjct: 535  GSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIRC---GSIDDARLLFDKLSVRHVT 591

Query: 354  SWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +W A+I G  Q   GR  EA+ LF  M +    P+  TF ++L A  +       ++V++
Sbjct: 592  TWNAMIGGAAQQRCGR--EALSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHS 649

Query: 413  HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            HA   G  +D  VGN+L+  Y++ G ++ A++ F+ + E+N+ ++  M+   A++     
Sbjct: 650  HATDAG-LVDLRVGNALVHTYSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHD 708

Query: 473  AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
            AF    ++   G+   A T+ S+LS  +S GA+   +++H   + +G  S+  + NAL+ 
Sbjct: 709  AFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVHNHAVSAGLVSDLRVGNALVH 768

Query: 533  MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
            MY++C +++ A  VF +M +R+V SWT MI G A+HG    AL+ F KM ++G KPNG +
Sbjct: 769  MYAKCGSIDDARSVFDDMVERDVFSWTVMIGGLAQHGRGLEALDFFVKMKSEGFKPNGYS 828

Query: 593  YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            Y+AVL+ACSHAGL+ EG + F SM  ++GI   MEHY CMVDLLGR+G L EA  FI +M
Sbjct: 829  YVAVLTACSHAGLVDEGRRQFLSMTQDYGIEPTMEHYTCMVDLLGRAGLLEEAELFILNM 888

Query: 653  PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
            P+  D   W   LGAC  +G+ E+ + AA+  L+  P+  + ++LLSN+YA+ G WE   
Sbjct: 889  PIEPDDAPWGALLGACVTYGNLEMAEFAAKERLKLKPKSASTYVLLSNIYAATGKWEQKL 948

Query: 713  NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
             +R  M+ + + KE G SWIE DN++H F VG+TSHP++ EIYA+L+ L  ++K  GY+P
Sbjct: 949  LVRSMMQRKGIRKEPGRSWIEVDNRIHSFVVGDTSHPESKEIYAQLNDLIERLKAKGYVP 1008

Query: 773  DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
            DT  VL   ++E K Q L  HSEK+A+ +GL+ T    PIRV+KNLRVC DCHTA K+IS
Sbjct: 1009 DTRLVLRNTDQEHKEQALCSHSEKLAIVYGLMHTQSKDPIRVYKNLRVCSDCHTATKFIS 1068

Query: 833  MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             +TGREIV RD+ RFHH KDG CSC DYW
Sbjct: 1069 KITGREIVARDAKRFHHFKDGVCSCGDYW 1097



 Score =  323 bits (828), Expect = 2e-85,   Method: Compositional matrix adjust.
 Identities = 207/671 (30%), Positives = 354/671 (52%), Gaps = 15/671 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           + A+  L +  Q+G   D  +Y  +L+ C++  +  L K VH  + +S +E N  + N L
Sbjct: 100 KDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAKQVHVCIIKSGMEQNLYVANKL 159

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + +Y +CG L  A ++F  +  K++I  W++MI  Y   G   DA+ ++ +M +    PN
Sbjct: 160 LRVYIRCGRLQCARQVFDKL-LKKNIYIWTTMIGGYAEYGHAEDAMRVYDKMRQECGQPN 218

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
           E  + ++++AC    N+  G  I+  +++ G F SDV V  AL++M+VK GS+  E A  
Sbjct: 219 EITYLSILKACCCPVNLKWGKKIHAHIIQSG-FQSDVRVETALVNMYVKCGSI--EDAQL 275

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FDKM E+N + WT+MI      G  ++A  LFL M   GF+P+ +T   +++A +    
Sbjct: 276 IFDKMVERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGFIPNSYTYVSILNANASAGA 335

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
               K++HS A+  GLALD+ VG +LV MYAK    GS+DD+R VFD M + ++ SWT +
Sbjct: 336 LEWVKEVHSHAVNAGLALDLRVGNALVHMYAK---SGSIDDARVVFDGMTERDIFSWTVM 392

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV--AEQVYTHAVK 416
           I G  Q  GR +EA  LF  M +    PN  T+ S+L A      S +   + V+ HA +
Sbjct: 393 IGGLAQH-GRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAIASTSALEWVKVVHKHAEE 451

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   D  +GN+LI MYA+ G ++DAR  F+ + +++++S+N M+   A+N    +AF +
Sbjct: 452 AGFISDLRIGNALIHMYAKCGSIDDARLVFDGMCDRDVISWNAMMGGLAQNGCGHEAFTV 511

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             +++  G+   + T+ SLL+   S  A+    ++H   +++G  S+  + +A I MY R
Sbjct: 512 FLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKHAVETGLISDFRVGSAFIHMYIR 571

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C +++ A  +F ++  R+V +W +MI G A+      AL +F +M  +G  P+  T+I +
Sbjct: 572 CGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREALSLFLQMQREGFIPDATTFINI 631

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           LSA      + E  K   S   + G+V  +     +V    + G++  A +    M +  
Sbjct: 632 LSANVDEEAL-EWVKEVHSHATDAGLVD-LRVGNALVHTYSKCGNVKYAKQVFDDM-VER 688

Query: 657 DVLVWRTFLGACRVHG-DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           +V  W   +G    HG   +   H  +M+ E    D   ++ + +  AS G  E+V  + 
Sbjct: 689 NVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTYVSILSACASTGALEWVKEVH 748

Query: 716 KRMKERNLIKE 726
                  L+ +
Sbjct: 749 NHAVSAGLVSD 759



 Score =  319 bits (817), Expect = 5e-84,   Method: Compositional matrix adjust.
 Identities = 200/619 (32%), Positives = 325/619 (52%), Gaps = 14/619 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  + A+   D M Q+   P+  TY  +LK+C    N   GK +H+ + +S  + +  + 
Sbjct: 198 GHAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWGKKIHAHIIQSGFQSDVRVE 257

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+++Y KCG + +A  IF  M  +R+++SW+ MI    + G+  +A H+F++M   GF
Sbjct: 258 TALVNMYVKCGSIEDAQLIFDKM-VERNVISWTVMIGGLAHYGRGQEAFHLFLQMQREGF 316

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN Y + +++ A ++   +     ++   +  G    D+ VG AL+ M+ K GS+D   
Sbjct: 317 IPNSYTYVSILNANASAGALEWVKEVHSHAVNAG-LALDLRVGNALVHMYAKSGSID--D 373

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV--SAC 293
           A  VFD MTE++   WT+MI    Q G  ++A  LFL M  +G LP+  T   ++  SA 
Sbjct: 374 ARVVFDGMTERDIFSWTVMIGGLAQHGRGQEAFSLFLQMQRNGCLPNLTTYLSILNASAI 433

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +        K +H  A   G   D+ +G +L+ MYAKC   GS+DD+R VFD M D +V+
Sbjct: 434 ASTSALEWVKVVHKHAEEAGFISDLRIGNALIHMYAKC---GSIDDARLVFDGMCDRDVI 490

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW A++ G  Q+G    EA  +F  M Q  + P+  T+ S+L   G+        +V+ H
Sbjct: 491 SWNAMMGGLAQNGC-GHEAFTVFLQMQQEGLVPDSTTYLSLLNTHGSTDALEWVNEVHKH 549

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           AV+ G   D  VG++ I MY R G ++DAR  F+ L  +++ ++N M+   A+     +A
Sbjct: 550 AVETGLISDFRVGSAFIHMYIRCGSIDDARLLFDKLSVRHVTTWNAMIGGAAQQRCGREA 609

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L  +++  G    A TF ++LS      A+   +++H+    +G      + NAL+  
Sbjct: 610 LSLFLQMQREGFIPDATTFINILSANVDEEALEWVKEVHSHATDAGLVDLR-VGNALVHT 668

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           YS+C NV+ A QVF +M +RNV +WT MI G A+HG    A   F +ML +GI P+  TY
Sbjct: 669 YSKCGNVKYAKQVFDDMVERNVTTWTMMIGGLAQHGCGHDAFSHFLQMLREGIVPDATTY 728

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           +++LSAC+  G + E  K   +     G+V  +     +V +  + GS+ +A      M 
Sbjct: 729 VSILSACASTGAL-EWVKEVHNHAVSAGLVSDLRVGNALVHMYAKCGSIDDARSVFDDM- 786

Query: 654 LSADVLVWRTFLGACRVHG 672
           +  DV  W   +G    HG
Sbjct: 787 VERDVFSWTVMIGGLAQHG 805



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 73/269 (27%), Positives = 133/269 (49%), Gaps = 13/269 (4%)

Query: 454 LVSYNTMVDAYAKN----LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
           LV  N  VD  A+     + ++ A  +L      G+   ++++ ++L        I   +
Sbjct: 79  LVCANASVDGAAEQTHNVITAKDAVAMLKIRVQQGIAIDSFSYVNILQRCLKQEDILLAK 138

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           Q+H  IIKSG E N  + N L+ +Y RC  ++ A QVF ++  +N+  WT+MI G+A++G
Sbjct: 139 QVHVCIIKSGMEQNLYVANKLLRVYIRCGRLQCARQVFDKLLKKNIYIWTTMIGGYAEYG 198

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
            A  A+ ++ KM  +  +PN ITY+++L AC     +  G K   +   + G    +   
Sbjct: 199 HAEDAMRVYDKMRQECGQPNEITYLSILKACCCPVNLKWG-KKIHAHIIQSGFQSDVRVE 257

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
             +V++  + GS+ +A + I    +  +V+ W   +G    +G    G+ A  + L+   
Sbjct: 258 TALVNMYVKCGSIEDA-QLIFDKMVERNVISWTVMIGGLAHYGR---GQEAFHLFLQMQR 313

Query: 690 QD--PAAHILLS--NLYASAGHWEYVANI 714
           +   P ++  +S  N  ASAG  E+V  +
Sbjct: 314 EGFIPNSYTYVSILNANASAGALEWVKEV 342


>gi|449510623|ref|XP_004163716.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g27610-like [Cucumis sativus]
          Length = 878

 Score =  580 bits (1496), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 318/849 (37%), Positives = 501/849 (59%), Gaps = 26/849 (3%)

Query: 26  QNLP---PSSSPPFIAQPTTSEPLS-----NRLIYHLN-DGRVQKAIFTLDLMTQKGNHP 76
           Q+LP     S P +  Q     PL      NRL++  + +   ++A+     +   G   
Sbjct: 43  QSLPFISLPSRPRYAHQLFDETPLKDISHYNRLLFDFSRNNHDREALHLFKDLHSSGLGV 102

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  T S  LK C    +  +G+ VH    +S    +  +  SL+ +Y K  D  +   IF
Sbjct: 103 DGLTLSCALKVCGVLFDQVVGRQVHCQSLKSGFLEDVSVGTSLVDMYMKTEDFEDGRGIF 162

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             MG K ++VSW+S++S Y   G   + IH+  +M   G  PN + F+ V+ A ++   +
Sbjct: 163 DEMGIK-NVVSWTSLLSGYARNGLNDEVIHLINQMQMEGVNPNGFTFATVLGALADESII 221

Query: 197 AIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
             G  ++  ++K G+ F + VC   ALI M++K  + +  A  VFD M  +++V W +MI
Sbjct: 222 EGGVQVHAMIVKNGFEFTTFVC--NALICMYLKSEM-VGDAEAVFDSMVVRDSVTWNIMI 278

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
                +G   +  ++F  M L+G    R      +  CS+       KQLH   ++ G  
Sbjct: 279 GGYAAIGFYLEGFQMFHRMRLAGVKLSRTVFCTALKLCSQQRELNFTKQLHCGVVKNGYE 338

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD--HNVMSWTAIITGYVQSGGRDKEAV 373
               +  +L+  Y+KC+   SVD++ K+F  M D  HNV++WTA+I G+VQ+   +K+AV
Sbjct: 339 FAQDIRTALMVTYSKCS---SVDEAFKLFS-MADAAHNVVTWTAMIGGFVQNN-NNKKAV 393

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            LF  M +  V PNHFT+++VL        S++  Q++   +K        V  +L+  Y
Sbjct: 394 DLFCQMSREGVRPNHFTYSTVLAG----KPSSLLSQLHAQIIKAYYEKVPSVATALLDAY 449

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            ++G + ++ + F S+  K++V+++ M+   A+  +SEKA E+  ++   GV  + YTF+
Sbjct: 450 VKTGNVVESARVFYSIPAKDIVAWSAMLTGLAQTRDSEKAMEVFIQLVKEGVKPNEYTFS 509

Query: 494 SLLSGASSIGA-IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           S+++  SS  A +  G+QIHA  +KSG  +  C+ +AL++MYS+  N+E+A +VF   E+
Sbjct: 510 SVINACSSSAATVEHGKQIHATAVKSGKSNALCVSSALLTMYSKKGNIESAEKVFTRQEE 569

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           R+++SW SMITG+ +HG A +ALE+F  M   G+  + +T+I VL+AC+HAGL+ EG K+
Sbjct: 570 RDIVSWNSMITGYGQHGDAKKALEVFQIMQNQGLPLDDVTFIGVLTACTHAGLVEEGEKY 629

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F  M  ++ I ++ EHY+CMVDL  R+G   +A++ I  MP  A   +WRT L ACRVH 
Sbjct: 630 FNIMIKDYHIDKKXEHYSCMVDLYSRAGMFDKAMDIINGMPFPASPTIWRTLLAACRVHR 689

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           + ELGK AAE ++   P D   ++LLSN++A AG+WE  A++RK M ER + KEAGCSWI
Sbjct: 690 NLELGKLAAEKLVSLQPNDAVGYVLLSNIHAVAGNWEEKAHVRKLMDERKVKKEAGCSWI 749

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E  N++  F  G+ SHP +  +YA+L++L++K+K+ GY PDTN+V H++EEE K   L Q
Sbjct: 750 EIKNRIFSFLAGDVSHPFSDLVYAKLEELSIKLKDMGYQPDTNYVFHDVEEEHKEAILSQ 809

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSE++A+A+GLI+     PI++ KNLR+CGDCH  I+ IS++  R +++RDSNRFHH K 
Sbjct: 810 HSERLAIAYGLIALPPGAPIQIEKNLRICGDCHNVIELISLIEERTLIVRDSNRFHHFKG 869

Query: 853 GKCSCNDYW 861
           G CSC  YW
Sbjct: 870 GVCSCGGYW 878


>gi|449523792|ref|XP_004168907.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 296/780 (37%), Positives = 465/780 (59%), Gaps = 11/780 (1%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           ++LL+ C   +  H    +  L+ ++ L    +    L+SL+SK G +NEA ++F+ + +
Sbjct: 53  AVLLELCTSMKELHQ---IIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           K D + + +M+  Y        A+     M      P  Y F+ +++ C +  ++  G  
Sbjct: 110 KLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+G L+    F ++V     +++M+ K    ++ AYK+FD+M E++ V W  +I   +Q 
Sbjct: 169 IHGQLI-TNSFAANVFAMTGVVNMYAKCR-QIDDAYKMFDRMPERDLVSWNTIIAGFSQN 226

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  + A+ L L M   G  PD  TL  V+ A +++ L   GK +H +AIR G A  V + 
Sbjct: 227 GFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIS 286

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +L DMY+KC   GSV+ +R +FD M    V+SW +++ GYVQ+G  +K A+ +F  M++
Sbjct: 287 TALADMYSKC---GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK-AIAVFEKMLE 342

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + P   T    L AC +L D    + V+    +     D  V NSLISMY++  R++ 
Sbjct: 343 EGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDI 402

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   F +L  +  VS+N M+  YA+N    +A     E++  G+   ++T  S++   + 
Sbjct: 403 ASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAE 462

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +      + IH  II+S  + N  +  AL+ MYS+C  +  A ++F  + DR+VI+W +M
Sbjct: 463 LSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAM 522

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I G+  HG    AL++F KM    ++PN ITY++V+SACSH+GL+ EG +HF+SM  ++G
Sbjct: 523 IDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYG 582

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           +   M+HY  MVDLLGR+G + EA +FI +MP+S  + V+   LGAC++H + E+G+ AA
Sbjct: 583 LEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHKNIEVGEKAA 642

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           + + E +P +   H+LL+N+YAS   W  VA +RK M+++ L K  GCS +E  N+VH F
Sbjct: 643 KKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSF 702

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
           + G T+HP++  IYA L++L  +IK  GY+PDTN +L ++E++ + Q L  HSEK+A+AF
Sbjct: 703 YSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAF 761

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GL++TS    I V KNLRVCGDCH A KYIS+VTGREI++RD  RFHH K+G CSC DYW
Sbjct: 762 GLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 262/518 (50%), Gaps = 20/518 (3%)

Query: 44  EPLSNRL--IYHL------NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           EP+ ++L  +YH        +  ++ A+  L  M      P +  ++ LLK C  + +  
Sbjct: 105 EPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLK 164

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            GK +H  L  +    N   +  ++++Y+KC  +++A K+F  M  +RD+VSW+++I+ +
Sbjct: 165 RGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRM-PERDLVSWNTIIAGF 223

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              G    A+ + + M + G  P+      V+ A ++   + +G  I+G+ ++ G F   
Sbjct: 224 SQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG-FAKL 282

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V +  AL DM+ K GSV  E+A  +FD M +K  V W  M+    Q G P  AI +F  M
Sbjct: 283 VNISTALADMYSKCGSV--ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKM 340

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +  G  P   T+   + AC++L     GK +H +  +  L  D+ V  SL+ MY+KC   
Sbjct: 341 LEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK-- 398

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
             VD +  +F+ +     +SW A+I GY Q+ GR  EA+  FS+M    + P+ FT  SV
Sbjct: 399 -RVDIASDIFNNLNGRTHVSWNAMILGYAQN-GRVSEALNCFSEMKSLGMKPDSFTMVSV 456

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           + A   L  +  A+ ++   ++     +  V  +L+ MY++ G +  ARK F+ + ++++
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV 516

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +++N M+D Y  +     A +L  +++   V  +  T+ S++S  S  G + +G + H +
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFK 575

Query: 515 IIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            +K   G E +   Y A++ +  R   ++ A+   + M
Sbjct: 576 SMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENM 613



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/435 (30%), Positives = 223/435 (51%), Gaps = 20/435 (4%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  +KA+  +  M  +G  PD  T   +L +        +GK +H    R+       
Sbjct: 225 QNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVN 284

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           I  +L  +YSKCG +  A  IF  M +++ +VSW+SM+  YV  G+   AI +F +MLE 
Sbjct: 285 ISTALADMYSKCGSVETARLIFDGM-DQKTVVSWNSMMDGYVQNGEPEKAIAVFEKMLEE 343

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P        + AC++  ++  G  ++ F+ +     SD+ V  +LI M+ K   VD+
Sbjct: 344 GIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLN-LGSDISVMNSLISMYSKCKRVDI 402

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            S   +F+ +  +  V W  MI    Q G   +A+  F +M   G  PD FT+  V+ A 
Sbjct: 403 AS--DIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPAL 460

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +EL +    K +H   IR+ L  ++ V  +LVDMY+KC   G++  +RK+FD + D +V+
Sbjct: 461 AELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKC---GAIHMARKLFDMISDRHVI 517

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           +W A+I GY  + G  + A+ LF  M +G V PN  T+ SV+ AC +   S + ++   H
Sbjct: 518 TWNAMIDGY-GTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSH---SGLVDEGLRH 573

Query: 414 --AVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAK 466
             ++K+   L+  + +  +++ +  R+GR+++A    E++     +  Y  M+ A    K
Sbjct: 574 FKSMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAMLGACKIHK 633

Query: 467 NLN-SEKAFELLHEI 480
           N+   EKA + L E+
Sbjct: 634 NIEVGEKAAKKLFEL 648


>gi|296084942|emb|CBI28351.3| unnamed protein product [Vitis vinifera]
          Length = 770

 Score =  577 bits (1487), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 286/702 (40%), Positives = 452/702 (64%), Gaps = 9/702 (1%)

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           +A+++F+ +   G   +    S V++ C    +  +G  ++   +KCG+ + DV VG +L
Sbjct: 75  EALNLFLGLRRSGSPTDGSSLSCVLKVCGCLFDRIVGKQVHCQCIKCGFVE-DVSVGTSL 133

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           +DM++K +  +E   +VFD+M  KN V WT ++    Q G    A++LF  M L G  P+
Sbjct: 134 VDMYMK-TESVEDGERVFDEMRVKNVVSWTSLLAGYRQNGLNEQALKLFSQMQLEGIKPN 192

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            FT + V+   +       G Q+H+  I++GL   + VG S+V+MY+K  +   V D++ 
Sbjct: 193 PFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIFVGNSMVNMYSKSLM---VSDAKA 249

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           VFD M + N +SW ++I G+V + G D EA +LF  M    V      FA+V+K C N+ 
Sbjct: 250 VFDSMENRNAVSWNSMIAGFV-TNGLDLEAFELFYRMRLEGVKLTQTIFATVIKLCANIK 308

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMV 461
           + + A+Q++   +K G   D  +  +L+  Y++   ++DA K F  +   +N+VS+  ++
Sbjct: 309 EMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSKCSEIDDAFKLFCMMHGVQNVVSWTAII 368

Query: 462 DAYAKNLNSEKAFELLHEIE-DTGVGTSAYTFASLLSG-ASSIGAIGKGEQIHARIIKSG 519
             Y +N  +++A  L  ++  + GV  + +TF+S+L+  A+   ++ +G+Q H+  IKSG
Sbjct: 369 SGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNACAAPTASVEQGKQFHSCSIKSG 428

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F +  C+ +AL++MY++  N+E+A +VFK   DR+++SW SMI+G+A+HG   ++L+IF 
Sbjct: 429 FSNALCVSSALVTMYAKRGNIESANEVFKRQVDRDLVSWNSMISGYAQHGCGKKSLKIFE 488

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M +  ++ +GIT+I V+SAC+HAGL++EG ++F  M  ++ IV  MEHY+CMVDL  R+
Sbjct: 489 EMRSKNLELDGITFIGVISACTHAGLVNEGQRYFDLMVKDYHIVPTMEHYSCMVDLYSRA 548

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L +A++ I  MP  A   +WRT L ACRVH + +LG+ AAE ++   PQD AA++LLS
Sbjct: 549 GMLEKAMDLINKMPFPAGATIWRTLLAACRVHLNVQLGELAAEKLISLQPQDSAAYVLLS 608

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA+AG+W+  A +RK M  + + KEAG SWIE  NK   F  G+ SHP++  IY +L+
Sbjct: 609 NIYATAGNWQERAKVRKLMDMKKVKKEAGYSWIEVKNKTFSFMAGDLSHPQSDRIYLKLE 668

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L++++K+ GY PDT +VLH++EEE K   L QHSE++A+AFGLI+T    PI++ KNLR
Sbjct: 669 ELSIRLKDAGYYPDTKYVLHDVEEEHKEVILSQHSERLAIAFGLIATPPGTPIQIVKNLR 728

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VCGDCHT IK IS + GR+IV+RDSNRFHH K G CSC DYW
Sbjct: 729 VCGDCHTVIKLISKIEGRDIVVRDSNRFHHFKGGSCSCGDYW 770



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 151/528 (28%), Positives = 268/528 (50%), Gaps = 20/528 (3%)

Query: 32  SSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIR 90
           S   F   P      +N L++  +     K    L L  ++   P D  + S +LK C  
Sbjct: 45  SQQLFDETPQQGLSRNNHLLFEFSRNDQNKEALNLFLGLRRSGSPTDGSSLSCVLKVCGC 104

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
             +  +GK VH    +     +  +  SL+ +Y K   + +  ++F  M   +++VSW+S
Sbjct: 105 LFDRIVGKQVHCQCIKCGFVEDVSVGTSLVDMYMKTESVEDGERVFDEM-RVKNVVSWTS 163

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           +++ Y   G    A+ +F +M   G  PN + F+AV+   +    V  G  ++  ++K G
Sbjct: 164 LLAGYRQNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSG 223

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             DS + VG ++++M+ K S+ +  A  VFD M  +N V W  MI      G   +A  L
Sbjct: 224 -LDSTIFVGNSMVNMYSK-SLMVSDAKAVFDSMENRNAVSWNSMIAGFVTNGLDLEAFEL 281

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M L G    +   + V+  C+ ++  +  KQLH   I+ G   D+ +  +L+  Y+K
Sbjct: 282 FYRMRLEGVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGSDFDLNIKTALMVAYSK 341

Query: 331 CTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNH 388
           C+    +DD+ K+F  M    NV+SWTAII+GYVQ+G  D+ A+ LF  M + + V PN 
Sbjct: 342 CS---EIDDAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDR-AMNLFCQMRREEGVEPNE 397

Query: 389 FTFASVLKACGNLLDS-NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
           FTF+SVL AC     S    +Q ++ ++K G +   CV ++L++MYA+ G +E A + F+
Sbjct: 398 FTFSSVLNACAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAKRGNIESANEVFK 457

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
              +++LVS+N+M+  YA++   +K+ ++  E+    +     TF  ++S  +  G + +
Sbjct: 458 RQVDRDLVSWNSMISGYAQHGCGKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNE 517

Query: 508 GEQIHARIIKSGFESNHCI-----YNALISMYSRCANVEAAFQVFKEM 550
           G++    ++K      H +     Y+ ++ +YSR   +E A  +  +M
Sbjct: 518 GQRYFDLMVK----DYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKM 561



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 121/422 (28%), Positives = 222/422 (52%), Gaps = 12/422 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++A+     M  +G  P+  T++ +L           G  VH+++ +S L+    
Sbjct: 170 QNGLNEQALKLFSQMQLEGIKPNPFTFAAVLGGLAADGAVEKGVQVHTMVIKSGLDSTIF 229

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NS++++YSK   +++A  +F SM N R+ VSW+SMI+ +V  G  ++A  +F  M   
Sbjct: 230 VGNSMVNMYSKSLMVSDAKAVFDSMEN-RNAVSWNSMIAGFVTNGLDLEAFELFYRMRLE 288

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G    +  F+ VI+ C+N + ++    ++  ++K G  D D+ +  AL+  + K S +++
Sbjct: 289 GVKLTQTIFATVIKLCANIKEMSFAKQLHCQVIKNGS-DFDLNIKTALMVAYSKCS-EID 346

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSA 292
            A+K+F  M   +N V WT +I+   Q G    A+ LF  M    G  P+ FT S V++A
Sbjct: 347 DAFKLFCMMHGVQNVVSWTAIISGYVQNGRTDRAMNLFCQMRREEGVEPNEFTFSSVLNA 406

Query: 293 CSE-LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           C+        GKQ HS +I++G +  +CV  +LV MYAK    G+++ + +VF R +D +
Sbjct: 407 CAAPTASVEQGKQFHSCSIKSGFSNALCVSSALVTMYAK---RGNIESANEVFKRQVDRD 463

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SW ++I+GY Q G   K+++K+F +M    +  +  TF  V+ AC +    N  ++ +
Sbjct: 464 LVSWNSMISGYAQHGC-GKKSLKIFEEMRSKNLELDGITFIGVISACTHAGLVNEGQRYF 522

Query: 412 THAVKRGRALDDCVGNS-LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN 469
              VK    +      S ++ +Y+R+G +E A      + F      + T++ A   +LN
Sbjct: 523 DLMVKDYHIVPTMEHYSCMVDLYSRAGMLEKAMDLINKMPFPAGATIWRTLLAACRVHLN 582

Query: 470 SE 471
            +
Sbjct: 583 VQ 584


>gi|302143669|emb|CBI22530.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  575 bits (1483), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 275/386 (71%), Positives = 306/386 (79%), Gaps = 40/386 (10%)

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L +EI DTG+G SA+TFASLLSGA+SIGA+GKGEQIH R++K G++SN CI NALISMYS
Sbjct: 194 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 253

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           RC N+EAAFQVF EMEDRNVISWTSMITGFAKHGFA RALE+F++ML  G KPN ITY+A
Sbjct: 254 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVA 313

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VLSACSH G+ISEG KHF SMY EHGIV RMEHYACMVDLLGRSG L EA+EFI SMPL 
Sbjct: 314 VLSACSHVGMISEGQKHFNSMYKEHGIVPRMEHYACMVDLLGRSGLLVEAMEFINSMPLM 373

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           AD LVWRT LGAC VHG+TELG+HAAEMILEQ+P DPAA+ILLSNL+ASAG W+ V  IR
Sbjct: 374 ADALVWRTLLGACHVHGNTELGRHAAEMILEQEPDDPAAYILLSNLHASAGQWKDVVKIR 433

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K MKERNLIKEAGCSWIE +N+VH+FHVGETSHP+  +IY ELDQLA KIKE GY+PDT+
Sbjct: 434 KSMKERNLIKEAGCSWIEVENRVHRFHVGETSHPQAWQIYQELDQLASKIKEMGYIPDTD 493

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
           F                                        NLRVCGDCHTAIKYISM T
Sbjct: 494 F----------------------------------------NLRVCGDCHTAIKYISMAT 513

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
           GREIV+RDSNRFHHIK+G CSCNDYW
Sbjct: 514 GREIVVRDSNRFHHIKNGVCSCNDYW 539



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 41/136 (30%), Positives = 82/136 (60%)

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF+++    +  + FTFAS+L    ++      EQ++   +K G   + C+ N+LISMY+
Sbjct: 194 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 253

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           R G +E A + F  + ++N++S+ +M+  +AK+  + +A E+ H++ +TG   +  T+ +
Sbjct: 254 RCGNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVA 313

Query: 495 LLSGASSIGAIGKGEQ 510
           +LS  S +G I +G++
Sbjct: 314 VLSACSHVGMISEGQK 329



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 42/120 (35%), Positives = 68/120 (56%), Gaps = 1/120 (0%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T++ LL           G+ +H  L +   + N  I N+LIS+YS+CG++  A ++F  M
Sbjct: 209 TFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYSRCGNIEAAFQVFNEM 268

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
              R+++SW+SMI+ +   G    A+ MF +MLE G  PNE  + AV+ ACS+   ++ G
Sbjct: 269 -EDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITYVAVLSACSHVGMISEG 327



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 39/132 (29%), Positives = 78/132 (59%), Gaps = 4/132 (3%)

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
           LF ++  +G     FT + ++S  + +     G+Q+H   ++ G   + C+  +L+ MY+
Sbjct: 194 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGYKSNQCICNALISMYS 253

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           +C   G+++ + +VF+ M D NV+SWT++ITG+ + G   + A+++F  M++    PN  
Sbjct: 254 RC---GNIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATR-ALEMFHQMLETGTKPNEI 309

Query: 390 TFASVLKACGNL 401
           T+ +VL AC ++
Sbjct: 310 TYVAVLSACSHV 321



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 42/138 (30%), Positives = 81/138 (58%), Gaps = 2/138 (1%)

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F E+ + G   + + F++++   ++   +  G  I+G LLK GY  S+ C+  ALI M+
Sbjct: 194 LFNEIADTGIGISAFTFASLLSGAASIGAMGKGEQIHGRLLKGGY-KSNQCICNALISMY 252

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            +   ++E+A++VF++M ++N + WT MIT   + G    A+ +F  M+ +G  P+  T 
Sbjct: 253 SRCG-NIEAAFQVFNEMEDRNVISWTSMITGFAKHGFATRALEMFHQMLETGTKPNEITY 311

Query: 287 SGVVSACSELELFTSGKQ 304
             V+SACS + + + G++
Sbjct: 312 VAVLSACSHVGMISEGQK 329


>gi|357133320|ref|XP_003568274.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 919

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 303/809 (37%), Positives = 479/809 (59%), Gaps = 7/809 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  ++A+     M + G  P     S +L +C ++  F LG+L+H  + +      
Sbjct: 118 YAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLGRLIHVQVYKQGFFSE 177

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + + N+LISLY +C     A+++F  M    D V+++++IS +   G    A+ +F EM 
Sbjct: 178 TFVGNALISLYLRCRSFRLADRVFCDM-LYCDSVTFNTLISGHAQCGHGDRALGIFDEMQ 236

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+    ++++ ACS   ++  G  ++ +LLK G    D  +  +L+D++VK S D
Sbjct: 237 LSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAG-MSLDYIMEGSLLDLYVK-SGD 294

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A ++FD     N V W LM+    Q+     +  +F  M+ +G  P++FT   ++  
Sbjct: 295 IEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAKSFDIFYRMLAAGVRPNKFTYPCMLRT 354

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       G+Q+HS  I+ G   D+ V   L+DMY+K    G +D ++++ D + + +V
Sbjct: 355 CTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKY---GWLDKAQRILDMIEEKDV 411

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT++I GYVQ     KEA++ F +M    + P++   AS + AC  +   +   Q++ 
Sbjct: 412 VSWTSMIAGYVQHE-FCKEALETFKEMQACGIWPDNIGLASAISACAGIKAVHQGSQIHA 470

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                G + D  + N L+ +YAR G  ++A  +FE++  K  +++N ++  +A++   E+
Sbjct: 471 RVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWNGLISGFAQSGLYEE 530

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++  +++  G   + +TF S +S ++++  I +G+QIHAR+IK+G+ S   I NALIS
Sbjct: 531 ALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQGKQIHARVIKTGYTSETEISNALIS 590

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y +C ++E A   F EM  RN +SW ++IT  ++HG    AL++F +M   G+KP+ +T
Sbjct: 591 LYGKCGSIEDAKMDFFEMTKRNEVSWNTIITCCSQHGRGLEALDLFDQMKQQGLKPSDVT 650

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VL+ACSH GL+ EG  +F+SM +EHGI  R +HYAC+VD+LGR+G L  A  F+  M
Sbjct: 651 FVGVLTACSHVGLVEEGLCYFKSMSNEHGIHPRPDHYACVVDILGRAGQLDRAKRFVEEM 710

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+ AD +VWRT L AC+VH + E+G+ AA+ +LE +P D A+++LLSN YA  G W    
Sbjct: 711 PIPADSMVWRTLLSACKVHKNLEIGEFAAKHLLELEPHDSASYVLLSNAYAVTGKWASRD 770

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            IRK MK+R + KE G SWIE  N VH F VG+  HP   +IY  L  L  ++ + GY  
Sbjct: 771 QIRKIMKDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLADQIYNFLSHLNDRLYKIGYKQ 830

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           +   + HE E+E K    F HSEK+AVAFGL+S     P+RV KNLRVC DCHT +K+ S
Sbjct: 831 ENYHLFHEKEKEGKDPTAFVHSEKLAVAFGLMSLPSCMPLRVIKNLRVCNDCHTWMKFTS 890

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V GREIVLRD  RFHH  +G CSC DYW
Sbjct: 891 GVMGREIVLRDVYRFHHFNNGSCSCGDYW 919



 Score =  293 bits (750), Expect = 3e-76,   Method: Compositional matrix adjust.
 Identities = 179/593 (30%), Positives = 318/593 (53%), Gaps = 10/593 (1%)

Query: 81  YSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           ++  L++C  S R + L   +H+      L    +I N LI LY+K G +  A ++F+ +
Sbjct: 44  FACALRACRGSGRRWPLVPEIHAKAIICGLSGYRIIGNLLIDLYAKKGFVRRARRVFEEL 103

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            + RD VSW +++S Y   G   +A+ ++ EM   G  P  Y  S+++ AC+ TE   +G
Sbjct: 104 -SVRDNVSWVAVLSGYAQNGLGEEAVRLYREMHRSGVVPTPYVLSSILSACTKTELFQLG 162

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            +I+  + K G+F S+  VG ALI ++++       A +VF  M   ++V +  +I+   
Sbjct: 163 RLIHVQVYKQGFF-SETFVGNALISLYLR-CRSFRLADRVFCDMLYCDSVTFNTLISGHA 220

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q G    A+ +F +M LSG  PD  T++ +++ACS +     GKQLHS+ ++ G++LD  
Sbjct: 221 QCGHGDRALGIFDEMQLSGLSPDSVTIASLLAACSAVGDLRKGKQLHSYLLKAGMSLDYI 280

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +  SL+D+Y K    G ++++ ++FD     NV+ W  ++  Y Q     K +  +F  M
Sbjct: 281 MEGSLLDLYVK---SGDIEEALQIFDSGDRTNVVLWNLMLVAYGQIDDLAK-SFDIFYRM 336

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           +   V PN FT+  +L+ C +  +  + EQ+++  +K G   D  V   LI MY++ G +
Sbjct: 337 LAAGVRPNKFTYPCMLRTCTHTGEIGLGEQIHSLTIKNGFQSDMYVSGVLIDMYSKYGWL 396

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + A++  + + EK++VS+ +M+  Y ++   ++A E   E++  G+       AS +S  
Sbjct: 397 DKAQRILDMIEEKDVVSWTSMIAGYVQHEFCKEALETFKEMQACGIWPDNIGLASAISAC 456

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           + I A+ +G QIHAR+  SG+ ++  I+N L+ +Y+RC   + AF  F+ +E +  I+W 
Sbjct: 457 AGIKAVHQGSQIHARVYVSGYSADVSIWNGLVYLYARCGISKEAFSSFEAIEHKEGITWN 516

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
            +I+GFA+ G    AL++F KM   G K N  T+++ +SA ++   I +G K   +   +
Sbjct: 517 GLISGFAQSGLYEEALKVFMKMDQAGAKYNVFTFVSSISASANLADIKQG-KQIHARVIK 575

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            G     E    ++ L G+ GS+ +A      M    +V  W T +  C  HG
Sbjct: 576 TGYTSETEISNALISLYGKCGSIEDAKMDFFEMTKRNEV-SWNTIITCCSQHG 627


>gi|449458783|ref|XP_004147126.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 821

 Score =  574 bits (1480), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 295/780 (37%), Positives = 464/780 (59%), Gaps = 11/780 (1%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           ++LL+ C   +  H    +  L+ ++ L    +    L+SL+SK G +NEA ++F+ + +
Sbjct: 53  AVLLELCTSMKELHQ---IIPLVIKNGLYNEHLFQTKLVSLFSKYGSINEAARVFEPIDD 109

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           K D + + +M+  Y        A+     M      P  Y F+ +++ C +  ++  G  
Sbjct: 110 KLDAL-YHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLKRGKE 168

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+G L+    F ++V     +++M+ K    ++ AYK+FD+M E++ V W  +I   +Q 
Sbjct: 169 IHGQLI-TNSFAANVFAMTGVVNMYAKCR-QIDDAYKMFDRMPERDLVSWNTIIAGFSQN 226

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  + A+ L L M   G  PD  TL  V+ A +++ L   GK +H +AIR G A  V + 
Sbjct: 227 GFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAGFAKLVNIS 286

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +L DMY+KC   GSV+ +R +FD M    V+SW +++ GYVQ+G  +K A+ +F  M++
Sbjct: 287 TALADMYSKC---GSVETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEK-AIAVFEKMLE 342

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + P   T    L AC +L D    + V+    +     D  V NSLISMY++  R++ 
Sbjct: 343 EGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCKRVDI 402

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   F +L  +  VS+N M+  YA+N    +A     E++  G+   ++T  S++   + 
Sbjct: 403 ASDIFNNLNGRTHVSWNAMILGYAQNGRVSEALNCFSEMKSLGMKPDSFTMVSVIPALAE 462

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +      + IH  II+S  + N  +  AL+ MYS+C  +  A ++F  + DR+VI+W +M
Sbjct: 463 LSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHVITWNAM 522

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I G+  HG    AL++F KM    ++PN ITY++V+SACSH+GL+ EG +HF+SM  ++G
Sbjct: 523 IDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLRHFKSMKQDYG 582

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           +   M+HY  MVDLLGR+G + EA +FI +MP+S  + V+    GAC++H + E+G+ AA
Sbjct: 583 LEPSMDHYGAMVDLLGRAGRIKEAWDFIENMPISPGITVYGAXXGACKIHKNIEVGEKAA 642

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           + + E +P +   H+LL+N+YAS   W  VA +RK M+++ L K  GCS +E  N+VH F
Sbjct: 643 KKLFELNPDEGGYHVLLANIYASTSKWSKVAEVRKTMEKKGLKKTPGCSVVELRNEVHSF 702

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
           + G T+HP++  IYA L++L  +IK  GY+PDTN +L ++E++ + Q L  HSEK+A+AF
Sbjct: 703 YSGSTTHPQSKRIYAFLEELVYEIKAAGYVPDTNLIL-DVEDDVQEQLLNSHSEKLAIAF 761

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GL++TS    I V KNLRVCGDCH A KYIS+VTGREI++RD  RFHH K+G CSC DYW
Sbjct: 762 GLLNTSPGTTIHVRKNLRVCGDCHNATKYISLVTGREIIVRDMQRFHHFKNGICSCGDYW 821



 Score =  213 bits (541), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 142/518 (27%), Positives = 262/518 (50%), Gaps = 20/518 (3%)

Query: 44  EPLSNRL--IYHL------NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           EP+ ++L  +YH        +  ++ A+  L  M      P +  ++ LLK C  + +  
Sbjct: 105 EPIDDKLDALYHTMLKGYAKNSSLETALAFLCRMRYDDVKPVVYNFTYLLKVCGDNADLK 164

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            GK +H  L  +    N   +  ++++Y+KC  +++A K+F  M  +RD+VSW+++I+ +
Sbjct: 165 RGKEIHGQLITNSFAANVFAMTGVVNMYAKCRQIDDAYKMFDRM-PERDLVSWNTIIAGF 223

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              G    A+ + + M + G  P+      V+ A ++   + +G  I+G+ ++ G F   
Sbjct: 224 SQNGFAKKALELVLRMQDEGQRPDSITLVTVLPAAADVGLLMVGKSIHGYAIRAG-FAKL 282

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V +  AL DM+ K GSV  E+A  +FD M +K  V W  M+    Q G P  AI +F  M
Sbjct: 283 VNISTALADMYSKCGSV--ETARLIFDGMDQKTVVSWNSMMDGYVQNGEPEKAIAVFEKM 340

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +  G  P   T+   + AC++L     GK +H +  +  L  D+ V  SL+ MY+KC   
Sbjct: 341 LEEGIDPTGVTIMEALHACADLGDLERGKFVHKFVDQLNLGSDISVMNSLISMYSKCK-- 398

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
             VD +  +F+ +     +SW A+I GY Q+ GR  EA+  FS+M    + P+ FT  SV
Sbjct: 399 -RVDIASDIFNNLNGRTHVSWNAMILGYAQN-GRVSEALNCFSEMKSLGMKPDSFTMVSV 456

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           + A   L  +  A+ ++   ++     +  V  +L+ MY++ G +  ARK F+ + ++++
Sbjct: 457 IPALAELSVTRHAKWIHGLIIRSCLDKNIFVTTALVDMYSKCGAIHMARKLFDMISDRHV 516

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +++N M+D Y  +     A +L  +++   V  +  T+ S++S  S  G + +G + H +
Sbjct: 517 ITWNAMIDGYGTHGLGRAALDLFDKMKKGAVEPNDITYLSVISACSHSGLVDEGLR-HFK 575

Query: 515 IIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            +K   G E +   Y A++ +  R   ++ A+   + M
Sbjct: 576 SMKQDYGLEPSMDHYGAMVDLLGRAGRIKEAWDFIENM 613


>gi|225464281|ref|XP_002271266.1| PREDICTED: pentatricopeptide repeat-containing protein At3g16610
           [Vitis vinifera]
          Length = 785

 Score =  573 bits (1478), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 300/784 (38%), Positives = 463/784 (59%), Gaps = 8/784 (1%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           + Y  LL++CI+S++    K +H    ++    +S +L+ L  LY  C  +  A ++F  
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           + N   ++ W+ +I +Y   G    AI ++  ML LG  PN+Y +  V++ACS    +  
Sbjct: 69  IPNP-SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  I+      G  +SDV V  AL+D + K  + +E A ++F  M+ ++ V W  MI  C
Sbjct: 128 GVEIHSHAKMFG-LESDVFVCTALVDFYAKCGILVE-AQRLFSSMSHRDVVAWNAMIAGC 185

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           +  G   DA++L + M   G  P+  T+ GV+    E +    GK LH + +R      V
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV 245

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG  L+DMYAKC     +  +RK+FD M   N +SW+A+I GYV S    KEA++LF  
Sbjct: 246 VVGTGLLDMYAKCQ---CLLYARKIFDVMGVRNEVSWSAMIGGYVASDCM-KEALELFDQ 301

Query: 379 MI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           MI +  + P   T  SVL+AC  L D +   +++ + +K G  LD  +GN+L+SMYA+ G
Sbjct: 302 MILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKCG 361

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++DA + F+ +  K+ VS++ +V    +N N+  A  +   ++ +G+     T   +L 
Sbjct: 362 VIDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             S + A+  G   H  +I  GF ++  I NALI MYS+C  +  A +VF  M+  +++S
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 481

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W +MI G+  HG    AL +F+ +LA G+KP+ IT+I +LS+CSH+GL+ EG   F +M 
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 541

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            +  IV RMEH  CMVD+LGR+G + EA  FIR+MP   DV +W   L ACR+H + ELG
Sbjct: 542 RDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELG 601

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           +  ++ I    P+     +LLSN+Y++AG W+  A+IR   K+  L K  GCSWIE +  
Sbjct: 602 EEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGI 661

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           VH F  G+ SH +  +I  +L++L +++K  GY  + +FV  ++EEE+K Q L  HSEK+
Sbjct: 662 VHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKL 721

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A+AFG+++    +PI V KNLRVCGDCHTAIK+++++T REI +RD+NRFHH K+G C+C
Sbjct: 722 AIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLITKREITVRDANRFHHFKNGTCNC 781

Query: 858 NDYW 861
            D+W
Sbjct: 782 GDFW 785



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 167/558 (29%), Positives = 275/558 (49%), Gaps = 17/558 (3%)

Query: 40  PTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG 97
           P  S  L N++I  Y  N G    AI     M   G  P+  TY  +LK+C        G
Sbjct: 70  PNPSVILWNQIIRAYAWN-GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
             +HS      LE +  +  +L+  Y+KCG L EA ++F SM + RD+V+W++MI+    
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSL 187

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G   DA+ + ++M E G CPN      V+      + +  G  ++G+ ++   FD+ V 
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR-RSFDNGVV 246

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           VG  L+DM+ K    L  A K+FD M  +N V W+ MI       C ++A+ LF  MIL 
Sbjct: 247 VGTGLLDMYAKCQC-LLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALELFDQMILK 305

Query: 278 GFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
             + P   TL  V+ AC++L   + G++LH + I+ G  LD+ +G +L+ MYAKC   G 
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGSVLDILLGNTLLSMYAKC---GV 362

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +DD+ + FD M   + +S++AI++G VQ+G     A+ +F  M    + P+  T   VL 
Sbjct: 363 IDDAIRFFDEMNPKDSVSFSAIVSGCVQNGNA-AVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC +L         + + + RG A D  + N+LI MY++ G++  AR+ F  +   ++VS
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 481

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE---QIHA 513
           +N M+  Y  +    +A  L H++   G+     TF  LLS  S  G + +G       +
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 541

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAA 572
           R         HCI   ++ +  R   ++ A    + M  + +V  W+++++    H    
Sbjct: 542 RDFSIVPRMEHCI--CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIE 599

Query: 573 RALEIFYKMLADGIKPNG 590
              E+  K+ + G +  G
Sbjct: 600 LGEEVSKKIQSLGPESTG 617


>gi|297740136|emb|CBI30318.3| unnamed protein product [Vitis vinifera]
          Length = 861

 Score =  572 bits (1475), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 305/805 (37%), Positives = 461/805 (57%), Gaps = 56/805 (6%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           + + +  RN    + VH+  +   +  N V+ N LI  YS    L++A  +F  M   RD
Sbjct: 85  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC-VRD 143

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
            VSWS M+  +   G  ++    F E++  G  P+ Y    VIRAC + +N+ +      
Sbjct: 144 SVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQM------ 197

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
                           AL+DM+VK   ++E A  +FDKM E++ V WT+MI    + G  
Sbjct: 198 ----------------ALVDMYVKCR-EIEDARFLFDKMQERDLVTWTVMIGGYAECGKA 240

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            +++ LF  M   G +PD+  +  VV AC++L      + +  +  R    LDV +G ++
Sbjct: 241 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 300

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           +DMYAKC   G V+ +R++FDRM + NV+SW+A+I  Y    G+ ++A+ LF  M+   +
Sbjct: 301 IDMYAKC---GCVESAREIFDRMEEKNVISWSAMIAAY-GYHGQGRKALDLFRMMLSSGM 356

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            P+  T AS+L AC N  +     QV+  A   G   +  V N L+  Y+    ++DA  
Sbjct: 357 LPDKITLASLLYACINCRNLTQVRQVHAQASVHGMLQNLIVANKLVHFYSYYRALDDAYG 416

Query: 445 AFESLFEKNLVSYNTMVDAYAK----------------------NL------NSEKAFEL 476
            F+ +  ++ VS++ MV  +AK                      N       N+ ++  L
Sbjct: 417 LFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESLVL 476

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             ++ + GV        +++   + +GA+ K   I   I +  F+ +  +  A+I M+++
Sbjct: 477 FDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAK 536

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  VE+A ++F  ME++NVISW++MI  +  HG   +AL++F  ML  GI PN IT +++
Sbjct: 537 CGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSL 596

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L ACSHAGL+ EG + F  M++++ +   ++HY C+VDLLGR+G L EAL+ I SM +  
Sbjct: 597 LYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCVVDLLGRAGRLDEALKLIESMTVEK 656

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  +W  FLGACR H D  L + AA  +LE  PQ+P  +ILLSN+YA+AG WE VA  R 
Sbjct: 657 DEGLWGAFLGACRTHKDVVLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKTRD 716

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M +R L K  G +WIE DNK H+F VG+T+HP++ EIY  L  L  K++  GY+PDTNF
Sbjct: 717 LMSQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNF 776

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH+++EE K+  L+ HSEK+A+AFGLI+T +  PIR+ KNLRVCGDCHT  K +S +TG
Sbjct: 777 VLHDVDEELKIGILYSHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITG 836

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R I++RD+NRFHH K+G CSC DYW
Sbjct: 837 RVIIVRDANRFHHFKEGACSCGDYW 861



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 211/426 (49%), Gaps = 44/426 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+  +++   + M ++G  PD      ++ +C +    H  +++   + R K + + ++ 
Sbjct: 238 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 297

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++I +Y+KCG +  A +IF  M  +++++SWS+MI++Y   G+   A+ +F  ML  G 
Sbjct: 298 TAMIDMYAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFRMMLSSGM 356

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++   ++++ AC N  N+     ++      G    ++ V   L+  F      L+ A
Sbjct: 357 LPDKITLASLLYACINCRNLTQVRQVHAQASVHGML-QNLIVANKLVH-FYSYYRALDDA 414

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQL-------GCPRDAIR-------------------- 269
           Y +FD M  +++V W++M+    ++       G  R+ IR                    
Sbjct: 415 YGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFCGNANESL 474

Query: 270 -LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
            LF  M   G +PD+  +  VV AC++L      + +  +  R    LDV +G +++DM+
Sbjct: 475 VLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMH 534

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           AKC   G V+ +R++FDRM + NV+SW+A+I  Y    G+ ++A+ LF  M++  + PN 
Sbjct: 535 AKC---GCVESAREIFDRMEEKNVISWSAMIAAY-GYHGQGRKALDLFPMMLRSGILPNK 590

Query: 389 FTFASVLKACGNLLDSNVAEQVYT-----HAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
            T  S+L AC +        + ++     ++V+       CV    + +  R+GR+++A 
Sbjct: 591 ITLVSLLYACSHAGLVEEGLRFFSLMWEDYSVRADVKHYTCV----VDLLGRAGRLDEAL 646

Query: 444 KAFESL 449
           K  ES+
Sbjct: 647 KLIESM 652


>gi|449448586|ref|XP_004142047.1| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Cucumis sativus]
          Length = 1037

 Score =  572 bits (1474), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 299/807 (37%), Positives = 486/807 (60%), Gaps = 7/807 (0%)

Query: 55   NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
             +G  ++AI     M      P     S +L +  + + F LG+ +H L+ +      + 
Sbjct: 238  QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297

Query: 115  ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
            + N L++LYS+   L  A +IF +M N RD VS++S+IS  V +G    A+ +F +M   
Sbjct: 298  VCNGLVALYSRSRKLISAERIFSTM-NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 175  GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               P+    ++++ AC++   +  G  ++   +K G   +D+ +  +L+D++ K   D+E
Sbjct: 357  CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAG-MSADIILEGSLLDLYSK-CADVE 414

Query: 235  SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            +A+K F     +N V W +M+    QL    D+  +F  M + G +P++FT   ++  C+
Sbjct: 415  TAHKFFLTTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474

Query: 295  ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
             L     G+Q+H+  I+TG  L+V V   L+DMYAK    G +  + ++  R+ + +V+S
Sbjct: 475  SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKY---GQLALALRILRRLPEDDVVS 531

Query: 355  WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
            WTA+I GYVQ      EA++LF +M    +  ++  FAS + AC  +      +Q++  +
Sbjct: 532  WTAMIAGYVQHD-MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQS 590

Query: 415  VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
               G   D  + N+LIS+YAR GR+++A  AFE + +KN +S+N++V   A++   E+A 
Sbjct: 591  YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEAL 650

Query: 475  ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            ++   +  T    + +T+ S +S A+S+  I +G+QIH+ ++K+G++S   + N+LIS+Y
Sbjct: 651  QVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLY 710

Query: 535  SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            ++  ++  A++ F +M +RNVISW +MITG+++HG    AL +F +M   GI PN +T++
Sbjct: 711  AKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFV 770

Query: 595  AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
             VLSACSH GL+ EG  +F SM+  H +V + EHY C+VDLLGR+G L  A+E+I+ MP+
Sbjct: 771  GVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPI 830

Query: 655  SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             AD ++WRT L AC +H + E+G+ AA  +LE +P+D A ++L+SN+YA +  W +    
Sbjct: 831  PADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWS 890

Query: 715  RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
            RK MK+R + KE G SWIE  N VH F+ G+  HP T +IY  +  L  +  E GY+ D+
Sbjct: 891  RKLMKDRGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDS 950

Query: 775  NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
              +L+E E+ QK      HSEK+A+AFGL+S   + PIRV KNLRVC DCH  IKY+S +
Sbjct: 951  FSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKI 1010

Query: 835  TGREIVLRDSNRFHHIKDGKCSCNDYW 861
            + R I++RD++RFHH   G CSC D+W
Sbjct: 1011 SNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  292 bits (747), Expect = 7e-76,   Method: Compositional matrix adjust.
 Identities = 204/714 (28%), Positives = 366/714 (51%), Gaps = 57/714 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+  G+  K I  ++ M ++G   +   Y  LL+ C+ S +      +H  +++S  +  
Sbjct: 34  HMEQGK-SKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++++SL+  Y + GD + A K+F    N R + SW+ MI  +V +        +F  ML
Sbjct: 93  PLLIDSLVDNYFRHGDQHGAVKVFDENSN-RSVFSWNKMIHVFVAQKSNFQVFCLFRRML 151

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
             G  PN Y F+ V++AC   + +A  ++  ++      G FDS   V   LID++ K  
Sbjct: 152 AEGITPNGYTFAGVLKACVGGD-IAFNYVKQVHSRTFYYG-FDSSPLVANLLIDLYSKNG 209

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +ESA KVF+ +  K+ V W  MI+  +Q G   +AI LF DM  S   P  + LS V+
Sbjct: 210 Y-IESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL 268

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SA ++++LF  G+QLH   I+ G   +  V   LV +Y++      +  + ++F  M   
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSR---KLISAERIFSTMNSR 325

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + +S+ ++I+G VQ G  D+ A++LF+ M +  + P+  T AS+L AC ++   +   Q+
Sbjct: 326 DGVSYNSLISGLVQQGFSDR-ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL 384

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           ++HA+K G + D  +  SL+ +Y++   +E A K F +   +N+V +N M+ AY +  N 
Sbjct: 385 HSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLTTETENIVLWNVMLVAYGQLDNL 444

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
             +FE+  +++  G+  + +T+ S+L   +S+GA+  GEQIH  +IK+GF+ N  + + L
Sbjct: 445 SDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVL 504

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           I MY++   +  A ++ + + + +V+SWT+MI G+ +H   + AL++F +M   GI+ + 
Sbjct: 505 IDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564

Query: 591 ITYIAVLSACS-----------HA------------------------GLISEGWKHFRS 615
           I + + +SAC+           HA                        G I E +  F  
Sbjct: 565 IGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALE-FIRSMPLSADV--LVWRTFLGACRVHG 672
           + D++ I      +  +V  L +SG   EAL+ F+R +   A+V    + + + A     
Sbjct: 625 IGDKNNI-----SWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLA 679

Query: 673 DTELGKHAAEMILEQ--DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           + + G+    M+L+   D +   ++ L+S LYA +G           M ERN+I
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLIS-LYAKSGSISDAWREFNDMSERNVI 732



 Score =  287 bits (734), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 185/605 (30%), Positives = 319/605 (52%), Gaps = 10/605 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M  +G  P+  T++ +LK+C+     F+  K VHS       + + ++ N LI LYSK G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            +  A K+F  +  K DIV+W +MIS     G + +AI +F +M      P  Y  S+V+
Sbjct: 210 YIESAKKVFNCICMK-DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL 268

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            A +  +   +G  ++  ++K G F S+  V   L+ ++ + S  L SA ++F  M  ++
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWG-FHSETYVCNGLVALYSR-SRKLISAERIFSTMNSRD 326

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V +  +I+   Q G    A+ LF  M      PD  T++ ++SAC+ +     G QLHS
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            AI+ G++ D+ +  SL+D+Y+KC     V+ + K F      N++ W  ++  Y Q   
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKC---ADVETAHKFFLTTETENIVLWNVMLVAYGQLDN 443

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
              ++ ++F  M    + PN FT+ S+L+ C +L    + EQ++TH +K G  L+  V +
Sbjct: 444 L-SDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 502

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
            LI MYA+ G++  A +    L E ++VS+  M+  Y ++    +A +L  E+E  G+  
Sbjct: 503 VLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF 562

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
               FAS +S  + I A+ +G+QIHA+   +GF ++  I NALIS+Y+RC  ++ A+  F
Sbjct: 563 DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           +++ D+N ISW S+++G A+ G+   AL++F +ML    + N  TY + +SA +    I 
Sbjct: 623 EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIK 682

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +G +   SM  + G     E    ++ L  +SGS+++A      M    +V+ W   +  
Sbjct: 683 QG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITG 740

Query: 668 CRVHG 672
              HG
Sbjct: 741 YSQHG 745


>gi|147790745|emb|CAN61464.1| hypothetical protein VITISV_005683 [Vitis vinifera]
          Length = 785

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 299/784 (38%), Positives = 462/784 (58%), Gaps = 8/784 (1%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           + Y  LL++CI+S++    K +H    ++    +S +L+ L  LY  C  +  A ++F  
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           + N   ++ W+ +I +Y   G    AI ++  ML LG  PN+Y +  V++ACS    +  
Sbjct: 69  IPNP-SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  I+      G  +SDV V  AL+D + K  + +E A ++F  M+ ++ V W  MI  C
Sbjct: 128 GVEIHSHAKMFG-LESDVFVCTALVDFYAKCGILVE-AQRLFSSMSHRDVVAWNAMIAGC 185

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           +  G   DA++L + M   G  P+  T+ GV+    E +    GK LH + +R      V
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVRRSFDNGV 245

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG  L+DMYAKC     +  +RK+FD M   N +SW+A+I GYV S    KEA++LF  
Sbjct: 246 VVGTGLLDMYAKCQ---CLLYARKIFDVMGVRNEVSWSAMIGGYVXSDCM-KEALELFDQ 301

Query: 379 MI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           MI +  + P   T  SVL+AC  L D +   +++ + +K G  LD  +GN+L+SMYA+ G
Sbjct: 302 MILKDAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKCG 361

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++DA + F+ +  K+ VS++ +V    +N N+  A  +   ++ +G+     T   +L 
Sbjct: 362 VIDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNAAVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             S + A+  G   H  +I  GF ++  I NALI MYS+C  +  A +VF  M+  +++S
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 481

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W +MI G+  HG    AL +F+ +LA G+KP+ IT+I +LS+CSH+GL+ EG   F +M 
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 541

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            +  IV RMEH  CMVD+LGR+G + EA  FIR+MP   DV +W   L ACR+H + ELG
Sbjct: 542 RDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIELG 601

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           +  ++ I    P+     +LLSN+Y++AG W+  A+IR   K+  L K  GCSWIE +  
Sbjct: 602 EEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIRITQKDWGLKKIPGCSWIEINGI 661

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           VH F  G+ SH +  +I  +L++L +++K  GY  + +FV  ++EEE+K Q L  HSEK+
Sbjct: 662 VHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECSFVFQDVEEEEKEQILLYHSEKL 721

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A+AFG+++    +PI V KNLRVCGDCH AIK+++++T REI +RD+NRFHH K+G C+C
Sbjct: 722 AIAFGILNLKAGRPILVTKNLRVCGDCHAAIKFMTVITKREITVRDANRFHHFKNGTCNC 781

Query: 858 NDYW 861
            D+W
Sbjct: 782 GDFW 785



 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 167/558 (29%), Positives = 275/558 (49%), Gaps = 17/558 (3%)

Query: 40  PTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG 97
           P  S  L N++I  Y  N G    AI     M   G  P+  TY  +LK+C        G
Sbjct: 70  PNPSVILWNQIIRAYAWN-GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
             +HS      LE +  +  +L+  Y+KCG L EA ++F SM + RD+V+W++MI+    
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSL 187

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G   DA+ + ++M E G CPN      V+      + +  G  ++G+ ++   FD+ V 
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTVGEAKALGHGKALHGYCVR-RSFDNGVV 246

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           VG  L+DM+ K    L  A K+FD M  +N V W+ MI       C ++A+ LF  MIL 
Sbjct: 247 VGTGLLDMYAKCQC-LLYARKIFDVMGVRNEVSWSAMIGGYVXSDCMKEALELFDQMILK 305

Query: 278 GFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
             + P   TL  V+ AC++L   + G++LH + I+ G  LD+ +G +L+ MYAKC   G 
Sbjct: 306 DAMDPTPVTLGSVLRACAKLTDLSRGRKLHCYIIKLGXVLDILLGNTLLSMYAKC---GV 362

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +DD+ + FD M   + +S++AI++G VQ+G     A+ +F  M    + P+  T   VL 
Sbjct: 363 IDDAIRFFDXMNPKDSVSFSAIVSGCVQNGNA-AVALSIFRMMQLSGIDPDLTTMLGVLP 421

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC +L         + + + RG A D  + N+LI MY++ G++  AR+ F  +   ++VS
Sbjct: 422 ACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIVS 481

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE---QIHA 513
           +N M+  Y  +    +A  L H++   G+     TF  LLS  S  G + +G       +
Sbjct: 482 WNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSSCSHSGLVMEGRLWFDAMS 541

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAA 572
           R         HCI   ++ +  R   ++ A    + M  + +V  W+++++    H    
Sbjct: 542 RDFSIVPRMEHCI--CMVDILGRAGLIDEAHHFIRNMPFEPDVRIWSALLSACRIHKNIE 599

Query: 573 RALEIFYKMLADGIKPNG 590
              E+  K+ + G +  G
Sbjct: 600 LGEEVSKKIQSLGPESTG 617


>gi|326529685|dbj|BAK04789.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 879

 Score =  570 bits (1470), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 313/841 (37%), Positives = 486/841 (57%), Gaps = 12/841 (1%)

Query: 24  SRQNLPPSSSPPFIAQPTTSE-PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           S+  LP S+   F   P       S+ +  + N+   ++A+     M  +G   +     
Sbjct: 48  SKCRLPGSARRVFDETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALP 107

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           ++LK    + +  LG  VH++   + L  +  + N+L+++Y   G ++EA ++F      
Sbjct: 108 IVLKC---APDAGLGVQVHAVAVSTGLSGDIFVANALVAMYGGFGFVDEARRVFDEAARD 164

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R+ VSW+ M+S++V   +  DA+ +F EM+  G  PNE+ FS V+ AC+ + ++  G  +
Sbjct: 165 RNAVSWNGMMSAFVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKV 224

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  +++ GY D DV    AL+DM+ K   D+  A  VF K+ + + V W   I+ C   G
Sbjct: 225 HAMVVRTGY-DKDVFTANALVDMYSKLG-DIHMAALVFGKVPKTDVVSWNAFISGCVLHG 282

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG--KQLHSWAIRTGLALDVCV 320
             + A+ L L M  SG +P+ FTLS ++ AC+          +Q+H + I+     D  +
Sbjct: 283 HDQHALELLLQMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYI 342

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           G +LVDMYAK    G +DD+RKVF+ +   +++ W A+I+G    GG   E++ LF  M 
Sbjct: 343 GVALVDMYAKY---GLLDDARKVFEWIPRKDLLLWNALISG-CSHGGCHGESLSLFCRMR 398

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +     N  T A+VLK+  +L   +   QV+  A K G   D  V N LI  Y +   + 
Sbjct: 399 KEGSDINRTTLAAVLKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLR 458

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A K FE     N++++ +M+ A ++  + E A +L  E+   G+    +  +SLL+  +
Sbjct: 459 YANKVFEEHSSDNIIAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACA 518

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           S+ A  +G+Q+HA +IK  F ++    NAL+  Y++C ++E A   F  + D+ V+SW++
Sbjct: 519 SLSAYEQGKQVHAHLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLPDKGVVSWSA 578

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI G A+HG   RAL++F +M+ + I PN IT  +VL AC+HAGL+ E   +F SM +  
Sbjct: 579 MIGGLAQHGHGKRALDVFRRMVDERIAPNHITLTSVLCACNHAGLVDEAKGYFSSMKEMF 638

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI +  EHY+CM+DLLGR+G L +A+E + SMP  A+  VW   L A RVH D ELGK A
Sbjct: 639 GIDRTEEHYSCMIDLLGRAGKLDDAMELVNSMPFEANAAVWGALLAASRVHRDPELGKLA 698

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE +   +P+    H+LL+N YASAG W+ VA +RK MK+  + KE   SW+E  ++VH 
Sbjct: 699 AEKLFVLEPEKSGTHVLLANTYASAGMWDEVAKVRKLMKDSKVKKEPAMSWVELKDRVHT 758

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F VG+ SHP+  +IYA+L++L   + + GY+P+    LH++++ +K   L  HSE++AVA
Sbjct: 759 FIVGDKSHPRARDIYAKLEELGDLMSKAGYVPNLEVDLHDVDKSEKELLLSHHSERLAVA 818

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           F LIST    PIRV KNLR+C DCH A K+IS +  REI++RD NRFHH  DG CSC DY
Sbjct: 819 FALISTPAGAPIRVKKNLRICRDCHVAFKFISKIVSREIIIRDINRFHHFSDGACSCGDY 878

Query: 861 W 861
           W
Sbjct: 879 W 879



 Score =  235 bits (600), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 177/633 (27%), Positives = 309/633 (48%), Gaps = 21/633 (3%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           ++ S LL     +++  LG  +H+ L +S L       N L+S YSKC     A ++F  
Sbjct: 5   ESISPLLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVFDE 62

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
             +    VSWSS++++Y N     +A+  F  M   G   NE+    V++      +  +
Sbjct: 63  TPDPCH-VSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKC---APDAGL 118

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITR 257
           G  ++   +  G    D+ V  AL+ M+  G   ++ A +VFD+   ++N V W  M++ 
Sbjct: 119 GVQVHAVAVSTG-LSGDIFVANALVAMY-GGFGFVDEARRVFDEAARDRNAVSWNGMMSA 176

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             +     DA+ LF +M+ SG  P+ F  S VV+AC+      +G+++H+  +RTG   D
Sbjct: 177 FVKNDRCSDAVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKD 236

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V    +LVDMY+K    G +  +  VF ++   +V+SW A I+G V   G D+ A++L  
Sbjct: 237 VFTANALVDMYSKL---GDIHMAALVFGKVPKTDVVSWNAFISGCVLH-GHDQHALELLL 292

Query: 378 DMIQGQVAPNHFTFASVLK--ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
            M    + PN FT +S+LK  A        +  Q++   +K     DD +G +L+ MYA+
Sbjct: 293 QMKSSGLVPNVFTLSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAK 352

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G ++DARK FE +  K+L+ +N ++   +      ++  L   +   G   +  T A++
Sbjct: 353 YGLLDDARKVFEWIPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAV 412

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   +S+ AI    Q+HA   K GF S+  + N LI  Y +C  +  A +VF+E    N+
Sbjct: 413 LKSTASLEAISDTTQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHSSDNI 472

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           I++TSMIT  ++      A+++F +ML  G++P+     ++L+AC+      +G K   +
Sbjct: 473 IAFTSMITALSQCDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQG-KQVHA 531

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
              +   +  +     +V    + GS+ +A      +P    V+ W   +G    HG   
Sbjct: 532 HLIKRKFMTDVFAGNALVYTYAKCGSIEDADLAFSGLP-DKGVVSWSAMIGGLAQHGH-- 588

Query: 676 LGKHAAEMILEQ-DPQDPAAHILLSNLYASAGH 707
            GK A ++     D +    HI L+++  +  H
Sbjct: 589 -GKRALDVFRRMVDERIAPNHITLTSVLCACNH 620



 Score =  169 bits (427), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 150/555 (27%), Positives = 260/555 (46%), Gaps = 50/555 (9%)

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
           T+++ +G  I+  LLK G   +       L+  + K  +   SA +VFD+  +   V W+
Sbjct: 17  TQSLFLGAHIHAHLLKSGLLHA---FRNHLLSFYSKCRLP-GSARRVFDETPDPCHVSWS 72

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            ++T  +    PR+A+  F  M   G   + F L  V+    +  L   G Q+H+ A+ T
Sbjct: 73  SLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL---GVQVHAVAVST 129

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTAIITGYVQSGGRDKE 371
           GL+ D+ V  +LV MY      G VD++R+VFD    D N +SW  +++ +V++  R  +
Sbjct: 130 GLSGDIFVANALVAMYGGF---GFVDEARRVFDEAARDRNAVSWNGMMSAFVKN-DRCSD 185

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           AV+LF +M+   V PN F F+ V+ AC    D     +V+   V+ G   D    N+L+ 
Sbjct: 186 AVELFGEMVWSGVRPNEFGFSCVVNACTGSRDLEAGRKVHAMVVRTGYDKDVFTANALVD 245

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY++ G +  A   F  + + ++VS+N  +     + + + A ELL +++ +G+  + +T
Sbjct: 246 MYSKLGDIHMAALVFGKVPKTDVVSWNAFISGCVLHGHDQHALELLLQMKSSGLVPNVFT 305

Query: 492 FASLLS--GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            +S+L     +  GA   G QIH  +IK+  +S+  I  AL+ MY++   ++ A +VF+ 
Sbjct: 306 LSSILKACAGAGAGAFALGRQIHGFMIKACADSDDYIGVALVDMYAKYGLLDDARKVFEW 365

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS-------- 601
           +  ++++ W ++I+G +  G    +L +F +M  +G   N  T  AVL + +        
Sbjct: 366 IPRKDLLLWNALISGCSHGGCHGESLSLFCRMRKEGSDINRTTLAAVLKSTASLEAISDT 425

Query: 602 ---HA---------------GLISEGWK-----HFRSMYDEHGIVQRMEHYACMVDLLGR 638
              HA               GLI   WK     +   +++EH     +  +  M+  L +
Sbjct: 426 TQVHALAEKIGFLSDSHVVNGLIDSYWKCNCLRYANKVFEEHS-SDNIIAFTSMITALSQ 484

Query: 639 SGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDTELGKHA-AEMILEQDPQDPAA 694
                +A++    M    L  D  V  + L AC      E GK   A +I  +   D  A
Sbjct: 485 CDHGEDAIKLFMEMLRKGLEPDPFVLSSLLNACASLSAYEQGKQVHAHLIKRKFMTDVFA 544

Query: 695 HILLSNLYASAGHWE 709
              L   YA  G  E
Sbjct: 545 GNALVYTYAKCGSIE 559



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 38/118 (32%), Positives = 60/118 (50%), Gaps = 2/118 (1%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           S  + + LL+  ++  ++  G  IHA ++KSG    H   N L+S YS+C    +A +VF
Sbjct: 3   SPESISPLLTRYAATQSLFLGAHIHAHLLKSGLL--HAFRNHLLSFYSKCRLPGSARRVF 60

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
            E  D   +SW+S++T ++ +     AL  F  M A G++ N      VL     AGL
Sbjct: 61  DETPDPCHVSWSSLVTAYSNNALPREALAAFRAMRARGVRCNEFALPIVLKCAPDAGL 118


>gi|357507065|ref|XP_003623821.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498836|gb|AES80039.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 837

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 296/780 (37%), Positives = 477/780 (61%), Gaps = 46/780 (5%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF-------- 168
           N L++  SK G +N+A K+F  M  K D  SW++MISSYVN G+ V+A  +F        
Sbjct: 69  NQLLNQLSKSGQVNDARKLFDKMPQK-DEYSWNTMISSYVNVGRLVEARELFDGCSCKSS 127

Query: 169 ----------------VEMLEL-------GFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
                           VE  +L       G+  +++   +V+R CS+   +  G +I+GF
Sbjct: 128 ITWSSIISGYCKFGCKVEAFDLFRSMRLEGWKASQFTLGSVLRVCSSLGLIQTGEMIHGF 187

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV----FDKMTEKNTVGWTLMITRCTQL 261
           ++K G F+ +V V   L+DM+ K     E+ +      FD+   KN V WT M+T   Q 
Sbjct: 188 VVKNG-FEGNVFVVTGLVDMYAKCKCVSEAEFLFKGLEFDR---KNHVLWTAMVTGYAQN 243

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G    A+  F  M   G   +++T   +++ACS +     G+Q+H + +++G   +V V 
Sbjct: 244 GDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSNVYVQ 303

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +LVDMYAKC   G + +++ + + M D +V+SW +++ G+V+ G  ++EA++LF +M  
Sbjct: 304 SALVDMYAKC---GDLKNAKNMLETMEDDDVVSWNSLMVGFVRHG-LEEEALRLFKNMHG 359

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             +  + +TF SVL  C  ++ S   + V+   +K G      V N+L+ MYA++G M+ 
Sbjct: 360 RNMKIDDYTFPSVLNCC--VVGSINPKSVHGLIIKTGFENYKLVSNALVDMYAKTGDMDC 417

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   FE + EK+++S+ ++V  YA+N + E++ ++  ++  TGV    +  AS+LS  + 
Sbjct: 418 AYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVASILSACAE 477

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +  +  G+Q+H   IKSG   +  +YN+L++MY++C  ++ A  +F  M+ ++VI+WT++
Sbjct: 478 LTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGCLDDADAIFVSMQVKDVITWTAI 537

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I G+A++G    +L+ +  M++ G +P+ IT+I +L ACSHAGL+ EG K+F+ M   +G
Sbjct: 538 IVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGRKYFQQMNKVYG 597

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           I    EHYACM+DL GRSG L EA + +  M +  D  VW++ L ACRVH + EL + AA
Sbjct: 598 IKPGPEHYACMIDLFGRSGKLDEAKQLLDQMDVKPDATVWKSLLSACRVHENLELAERAA 657

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
             + E +P +   +++LSN+Y+++  W  VA IRK MK + ++KE GCSW+E +++V+ F
Sbjct: 658 TNLFELEPMNAMPYVMLSNMYSASRKWNDVAKIRKLMKSKGIVKEPGCSWLEINSRVNTF 717

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
              +  HP+  EIY ++D++ L+IKE GY+PD +F LH++++E K   L  HSEK+AVAF
Sbjct: 718 ISDDRGHPREAEIYTKIDEIILRIKEAGYVPDMSFSLHDMDKEGKEVGLAYHSEKLAVAF 777

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GL++   S PIR+FKNLRVCGDCH+A+KYIS V  R I+LRDSN FHH ++G+CSC DYW
Sbjct: 778 GLLAAPPSAPIRIFKNLRVCGDCHSAMKYISRVFTRHIILRDSNCFHHFREGECSCGDYW 837



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 142/496 (28%), Positives = 255/496 (51%), Gaps = 19/496 (3%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T   +L+ C        G+++H  + ++  E N  ++  L+ +Y+KC  ++EA  +FK +
Sbjct: 164 TLGSVLRVCSSLGLIQTGEMIHGFVVKNGFEGNVFVVTGLVDMYAKCKCVSEAEFLFKGL 223

Query: 140 G-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
             ++++ V W++M++ Y   G    A+  F  M   G   N+Y F  ++ ACS+      
Sbjct: 224 EFDRKNHVLWTAMVTGYAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCF 283

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  ++GF++K G F S+V V  AL+DM+ K   DL++A  + + M + + V W  ++   
Sbjct: 284 GEQVHGFIVKSG-FGSNVYVQSALVDMYAKCG-DLKNAKNMLETMEDDDVVSWNSLMVGF 341

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            + G   +A+RLF +M       D +T   V++ C    +  + K +H   I+TG     
Sbjct: 342 VRHGLEEEALRLFKNMHGRNMKIDDYTFPSVLNCCVVGSI--NPKSVHGLIIKTGFENYK 399

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            V  +LVDMYAK    G +D +  VF++ML+ +V+SWT+++TGY Q+   + E++K+F D
Sbjct: 400 LVSNALVDMYAK---TGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHE-ESLKIFCD 455

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    V P+ F  AS+L AC  L      +QV+   +K G      V NSL++MYA+ G 
Sbjct: 456 MRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGC 515

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ++DA   F S+  K+++++  ++  YA+N     + +    +  +G      TF  LL  
Sbjct: 516 LDDADAIFVSMQVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLFA 575

Query: 499 ASSIGAIGKGEQIHARI-----IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
            S  G + +G +   ++     IK G E   C    +I ++ R   ++ A Q+  +M+ +
Sbjct: 576 CSHAGLVDEGRKYFQQMNKVYGIKPGPEHYAC----MIDLFGRSGKLDEAKQLLDQMDVK 631

Query: 554 -NVISWTSMITGFAKH 568
            +   W S+++    H
Sbjct: 632 PDATVWKSLLSACRVH 647



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/406 (30%), Positives = 220/406 (54%), Gaps = 26/406 (6%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   KA+     M  +G   +  T+  +L +C        G+ VH  + +S    N
Sbjct: 240 YAQNGDGYKAVEFFRYMHAQGVECNQYTFPTILTACSSVLARCFGEQVHGFIVKSGFGSN 299

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + ++L+ +Y+KCGDL  A  + ++M +  D+VSW+S++  +V  G + +A+ +F  M 
Sbjct: 300 VYVQSALVDMYAKCGDLKNAKNMLETMEDD-DVVSWNSLMVGFVRHGLEEEALRLFKNMH 358

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHI----IYGFLLKCGYFDSDVCVGCALIDMFVK 228
                 ++Y F +V+  C       +G I    ++G ++K G F++   V  AL+DM+ K
Sbjct: 359 GRNMKIDDYTFPSVLNCC------VVGSINPKSVHGLIIKTG-FENYKLVSNALVDMYAK 411

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            + D++ AY VF+KM EK+ + WT ++T   Q     +++++F DM ++G  PD+F ++ 
Sbjct: 412 -TGDMDCAYTVFEKMLEKDVISWTSLVTGYAQNNSHEESLKIFCDMRVTGVNPDQFIVAS 470

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++SAC+EL L   GKQ+H   I++GL     V  SLV MYAKC   G +DD+  +F  M 
Sbjct: 471 ILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKC---GCLDDADAIFVSMQ 527

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSN- 405
             +V++WTAII GY Q+ G+ + ++K +  M+     P+  TF  +L AC    L+D   
Sbjct: 528 VKDVITWTAIIVGYAQN-GKGRNSLKFYDAMVSSGTRPDFITFIGLLFACSHAGLVDEGR 586

Query: 406 --VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
               +    + +K G     C    +I ++ RSG++++A++  + +
Sbjct: 587 KYFQQMNKVYGIKPGPEHYAC----MIDLFGRSGKLDEAKQLLDQM 628



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/191 (27%), Positives = 95/191 (49%), Gaps = 3/191 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G +PD    + +L +C        GK VH    +S L  +  + NSL+++Y+KCG 
Sbjct: 456 MRVTGVNPDQFIVASILSACAELTLLEFGKQVHLDFIKSGLRWSQSVYNSLVAMYAKCGC 515

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L++A+ IF SM   +D+++W+++I  Y   GK  +++  +  M+  G  P+   F  ++ 
Sbjct: 516 LDDADAIFVSM-QVKDVITWTAIIVGYAQNGKGRNSLKFYDAMVSSGTRPDFITFIGLLF 574

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK-N 247
           ACS+   V  G   +  + K             +ID+F + S  L+ A ++ D+M  K +
Sbjct: 575 ACSHAGLVDEGRKYFQQMNKVYGIKPGPEHYACMIDLFGR-SGKLDEAKQLLDQMDVKPD 633

Query: 248 TVGWTLMITRC 258
              W  +++ C
Sbjct: 634 ATVWKSLLSAC 644


>gi|359489080|ref|XP_002264194.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Vitis vinifera]
          Length = 889

 Score =  570 bits (1468), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 306/837 (36%), Positives = 489/837 (58%), Gaps = 15/837 (1%)

Query: 29  PPSSSPPF-IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLK 86
           P SS   F +A P+ +  L N +I  L    +     +L   TQ+    PD  T+  ++ 
Sbjct: 64  PTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVIN 123

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C    +F + K +H  +       +  I N+LI +Y +  DL++A K+F+ M   RD+V
Sbjct: 124 ACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM-PLRDVV 182

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW+S+IS Y   G   +A+ ++     LG  P+ Y  S+V+RAC    +V  G II+G +
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 242

Query: 207 LKCGYFDSDVCVGCALIDMFVK--GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
            K G    DV V   L+ M+ K  G +D     ++FDKM  ++ V W  MI   +Q+G  
Sbjct: 243 EKIG-IKKDVIVNNGLLSMYCKFNGLID---GRRIFDKMVLRDAVSWNTMICGYSQVGLY 298

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            ++I+LF++M+ + F PD  T++ ++ AC  L     GK +H + I +G   D      L
Sbjct: 299 EESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 357

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           ++MYAKC   G++  S++VF  M   + +SW ++I  Y+Q+G  D EA+KLF  M++  V
Sbjct: 358 INMYAKC---GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD-EAMKLFK-MMKTDV 412

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            P+  T+  +L     L D ++ ++++    K G   +  V N+L+ MYA+ G M D+ K
Sbjct: 413 KPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLK 472

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            FE++  ++++++NT++ +   + +      ++  +   GV     T  S+L   S + A
Sbjct: 473 VFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAA 532

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
             +G++IH  I K G ES+  + N LI MYS+C ++  +FQVFK M+ ++V++WT++I+ 
Sbjct: 533 KRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISA 592

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
              +G   +A+  F +M A GI P+ + ++A++ ACSH+GL+ EG  +F  M  ++ I  
Sbjct: 593 CGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEP 652

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           R+EHYAC+VDLL RS  L +A +FI SMPL  D  +W   L ACR+ GDTE+ +  +E I
Sbjct: 653 RIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAERVSERI 712

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
           +E +P D   ++L+SN+YA+ G W+ V +IRK +K R L K+ GCSW+E  NKV+ F  G
Sbjct: 713 IELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTG 772

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
                +  E+   L  LA  + + GY+ +  FVLH+++E++K   L  HSE++A+AFGL+
Sbjct: 773 TKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLL 832

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T    P++V KNLRVC DCHT  KYIS +  RE+++RD+NRFH  KDG CSC DYW
Sbjct: 833 NTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCGDYW 889



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 172/625 (27%), Positives = 320/625 (51%), Gaps = 17/625 (2%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +HSL+    L  + +    LI+ Y+   D   +  +F+      ++  W+S+I +  + G
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A+ ++ E   +   P+ Y F +VI AC+   +  +   I+  +L  G F SD+ +G
Sbjct: 95  LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMG-FGSDLYIG 153

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            ALIDM+ + + DL+ A KVF++M  ++ V W  +I+     G   +A+ ++      G 
Sbjct: 154 NALIDMYCRFN-DLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 212

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +PD +T+S V+ AC  L     G  +H    + G+  DV V   L+ MY  C  +G + D
Sbjct: 213 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY--CKFNGLI-D 269

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            R++FD+M+  + +SW  +I GY Q G  + E++KLF +M+  Q  P+  T  S+L+ACG
Sbjct: 270 GRRIFDKMVLRDAVSWNTMICGYSQVGLYE-ESIKLFMEMVN-QFKPDLLTITSILQACG 327

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
           +L D    + V+ + +  G   D    N LI+MYA+ G +  +++ F  +  K+ VS+N+
Sbjct: 328 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 387

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M++ Y +N + ++A +L   ++ T V   + T+  LLS ++ +G +  G+++H  + K G
Sbjct: 388 MINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLHLGKELHCDLAKMG 446

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F SN  + N L+ MY++C  +  + +VF+ M+ R++I+W ++I            L +  
Sbjct: 447 FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMIS 506

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M  +G+ P+  T +++L  CS      +G K       + G+   +     ++++  + 
Sbjct: 507 RMRTEGVTPDMATMLSILPVCSLLAAKRQG-KEIHGCIFKLGLESDVPVGNVLIEMYSKC 565

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ----DPAAH 695
           GSL  + +  + M  + DV+ W   + AC ++G+   GK A     E +      D  A 
Sbjct: 566 GSLRNSFQVFKLMK-TKDVVTWTALISACGMYGE---GKKAVRAFGEMEAAGIVPDHVAF 621

Query: 696 ILLSNLYASAGHWEYVANIRKRMKE 720
           + +    + +G  E   N   RMK+
Sbjct: 622 VAIIFACSHSGLVEEGLNYFHRMKK 646



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 93/205 (45%), Gaps = 15/205 (7%)

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           K   +LHE       +    F+S+    +S     +  ++H+ II  G   +      LI
Sbjct: 2   KTLRVLHEC------SRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI 55

Query: 532 SMYSRCANVEAAFQVFK-EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + Y+   +  ++F VF+      NV  W S+I     +G  + AL ++ +     ++P+ 
Sbjct: 56  AKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDT 115

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYD---EHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            T+ +V++AC  AGL+   ++  +S++D   + G    +     ++D+  R   L +A +
Sbjct: 116 YTFPSVINAC--AGLLD--FEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARK 171

Query: 648 FIRSMPLSADVLVWRTFLGACRVHG 672
               MPL  DV+ W + +     +G
Sbjct: 172 VFEEMPLR-DVVSWNSLISGYNANG 195


>gi|449497733|ref|XP_004160501.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g13650-like [Cucumis sativus]
          Length = 1037

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 298/807 (36%), Positives = 485/807 (60%), Gaps = 7/807 (0%)

Query: 55   NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
             +G  ++AI     M      P     S +L +  + + F LG+ +H L+ +      + 
Sbjct: 238  QNGLEEEAILLFCDMHASEIFPTPYVLSSVLSASTKIQLFELGEQLHCLVIKWGFHSETY 297

Query: 115  ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
            + N L++LYS+   L  A +IF +M N RD VS++S+IS  V +G    A+ +F +M   
Sbjct: 298  VCNGLVALYSRSRKLISAERIFSTM-NSRDGVSYNSLISGLVQQGFSDRALELFTKMQRD 356

Query: 175  GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               P+    ++++ AC++   +  G  ++   +K G   +D+ +  +L+D++ K   D+E
Sbjct: 357  CLKPDCITVASLLSACASVGALHKGMQLHSHAIKAG-MSADIILEGSLLDLYSK-CADVE 414

Query: 235  SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            +A+K F     +N V W +M+    QL    D+  +F  M + G +P++FT   ++  C+
Sbjct: 415  TAHKFFLXTETENIVLWNVMLVAYGQLDNLSDSFEIFRQMQMEGMIPNQFTYPSILRTCT 474

Query: 295  ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
             L     G+Q+H+  I+TG  L+V V   L+DMYAK    G +  + ++  R+ + +V+S
Sbjct: 475  SLGALYLGEQIHTHVIKTGFQLNVYVCSVLIDMYAKY---GQLALALRILRRLPEDDVVS 531

Query: 355  WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
            WTA+I GYVQ      EA++LF +M    +  ++  FAS + AC  +      +Q++  +
Sbjct: 532  WTAMIAGYVQHD-MFSEALQLFEEMEYRGIQFDNIGFASAISACAGIRALRQGQQIHAQS 590

Query: 415  VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
               G   D  + N+LIS+YAR GR+++A  AFE + +KN +S+N++V   A++   E+A 
Sbjct: 591  YAAGFGADLSINNALISLYARCGRIQEAYLAFEKIGDKNNISWNSLVSGLAQSGYFEEAL 650

Query: 475  ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            ++   +  T    + +T+ S +S A+S+  I +G+QIH+ ++K+G++S   + N+LIS+Y
Sbjct: 651  QVFVRMLRTEAEVNMFTYGSAISAAASLANIKQGQQIHSMVLKTGYDSEREVSNSLISLY 710

Query: 535  SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            ++  ++  A++ F +M +RNVISW +MITG+++HG    AL +F +M   GI PN +T++
Sbjct: 711  AKSGSISDAWREFNDMSERNVISWNAMITGYSQHGCGMEALRLFEEMKVCGIMPNHVTFV 770

Query: 595  AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
             VLSACSH GL+ EG  +F SM+  H +V + EHY C+VDLLGR+G L  A+E+I+ MP+
Sbjct: 771  GVLSACSHIGLVKEGLDYFESMFKIHDLVPKSEHYVCVVDLLGRAGQLDRAMEYIKEMPI 830

Query: 655  SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             AD ++WRT L AC +H + E+G+ AA  +LE +P+D A ++L+SN+YA +  W +    
Sbjct: 831  PADAMIWRTLLSACVIHKNIEIGERAAHHLLELEPEDSATYVLISNIYAVSRQWIHRDWS 890

Query: 715  RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
            RK MK+  + KE G SWIE  N VH F+ G+  HP T +IY  +  L  +  E GY+ D+
Sbjct: 891  RKLMKDXGVKKEPGRSWIEVKNAVHAFYAGDKLHPLTNQIYEYIGHLNRRTSEIGYVQDS 950

Query: 775  NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
              +L+E E+ QK      HSEK+A+AFGL+S   + PIRV KNLRVC DCH  IKY+S +
Sbjct: 951  FSLLNESEQGQKDPITHVHSEKLAIAFGLLSLGNNIPIRVMKNLRVCNDCHNWIKYVSKI 1010

Query: 835  TGREIVLRDSNRFHHIKDGKCSCNDYW 861
            + R I++RD++RFHH   G CSC D+W
Sbjct: 1011 SNRSIIVRDAHRFHHFDGGVCSCKDFW 1037



 Score =  291 bits (745), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 204/714 (28%), Positives = 365/714 (51%), Gaps = 57/714 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+  G+  K I  ++ M ++G   +   Y  LL+ C+ S +      +H  +++S  +  
Sbjct: 34  HMEQGK-SKRIQLMNFMEERGVRSNYQNYLWLLEGCLTSGSLFETMRLHCRISKSGFDGE 92

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++++SL+  Y + GD + A K+F    N R + SW+ MI  +V +        +F  ML
Sbjct: 93  PLLIDSLVDNYFRHGDQHGAVKVFDENSN-RSVFSWNKMIHVFVAQKSNFQVFCLFRRML 151

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
             G  PN Y F+ V++AC   + +A  ++  ++      G FDS   V   LID++ K  
Sbjct: 152 AEGITPNGYTFAGVLKACVGGD-IAFNYVKQVHSRTFYYG-FDSSPLVANLLIDLYSKNG 209

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +ESA KVF+ +  K+ V W  MI+  +Q G   +AI LF DM  S   P  + LS V+
Sbjct: 210 Y-IESAKKVFNCICMKDIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL 268

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SA ++++LF  G+QLH   I+ G   +  V   LV +Y++      +  + ++F  M   
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWGFHSETYVCNGLVALYSRSR---KLISAERIFSTMNSR 325

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + +S+ ++I+G VQ G  D+ A++LF+ M +  + P+  T AS+L AC ++   +   Q+
Sbjct: 326 DGVSYNSLISGLVQQGFSDR-ALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQL 384

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           ++HA+K G + D  +  SL+ +Y++   +E A K F     +N+V +N M+ AY +  N 
Sbjct: 385 HSHAIKAGMSADIILEGSLLDLYSKCADVETAHKFFLXTETENIVLWNVMLVAYGQLDNL 444

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
             +FE+  +++  G+  + +T+ S+L   +S+GA+  GEQIH  +IK+GF+ N  + + L
Sbjct: 445 SDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCSVL 504

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           I MY++   +  A ++ + + + +V+SWT+MI G+ +H   + AL++F +M   GI+ + 
Sbjct: 505 IDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQFDN 564

Query: 591 ITYIAVLSACS-----------HA------------------------GLISEGWKHFRS 615
           I + + +SAC+           HA                        G I E +  F  
Sbjct: 565 IGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAFEK 624

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALE-FIRSMPLSADV--LVWRTFLGACRVHG 672
           + D++ I      +  +V  L +SG   EAL+ F+R +   A+V    + + + A     
Sbjct: 625 IGDKNNI-----SWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLA 679

Query: 673 DTELGKHAAEMILEQ--DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           + + G+    M+L+   D +   ++ L+S LYA +G           M ERN+I
Sbjct: 680 NIKQGQQIHSMVLKTGYDSEREVSNSLIS-LYAKSGSISDAWREFNDMSERNVI 732



 Score =  287 bits (735), Expect = 2e-74,   Method: Compositional matrix adjust.
 Identities = 185/605 (30%), Positives = 319/605 (52%), Gaps = 10/605 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M  +G  P+  T++ +LK+C+     F+  K VHS       + + ++ N LI LYSK G
Sbjct: 150 MLAEGITPNGYTFAGVLKACVGGDIAFNYVKQVHSRTFYYGFDSSPLVANLLIDLYSKNG 209

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            +  A K+F  +  K DIV+W +MIS     G + +AI +F +M      P  Y  S+V+
Sbjct: 210 YIESAKKVFNCICMK-DIVTWVAMISGLSQNGLEEEAILLFCDMHASEIFPTPYVLSSVL 268

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            A +  +   +G  ++  ++K G F S+  V   L+ ++ + S  L SA ++F  M  ++
Sbjct: 269 SASTKIQLFELGEQLHCLVIKWG-FHSETYVCNGLVALYSR-SRKLISAERIFSTMNSRD 326

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V +  +I+   Q G    A+ LF  M      PD  T++ ++SAC+ +     G QLHS
Sbjct: 327 GVSYNSLISGLVQQGFSDRALELFTKMQRDCLKPDCITVASLLSACASVGALHKGMQLHS 386

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            AI+ G++ D+ +  SL+D+Y+KC     V+ + K F      N++ W  ++  Y Q   
Sbjct: 387 HAIKAGMSADIILEGSLLDLYSKC---ADVETAHKFFLXTETENIVLWNVMLVAYGQLDN 443

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
              ++ ++F  M    + PN FT+ S+L+ C +L    + EQ++TH +K G  L+  V +
Sbjct: 444 L-SDSFEIFRQMQMEGMIPNQFTYPSILRTCTSLGALYLGEQIHTHVIKTGFQLNVYVCS 502

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
            LI MYA+ G++  A +    L E ++VS+  M+  Y ++    +A +L  E+E  G+  
Sbjct: 503 VLIDMYAKYGQLALALRILRRLPEDDVVSWTAMIAGYVQHDMFSEALQLFEEMEYRGIQF 562

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
               FAS +S  + I A+ +G+QIHA+   +GF ++  I NALIS+Y+RC  ++ A+  F
Sbjct: 563 DNIGFASAISACAGIRALRQGQQIHAQSYAAGFGADLSINNALISLYARCGRIQEAYLAF 622

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           +++ D+N ISW S+++G A+ G+   AL++F +ML    + N  TY + +SA +    I 
Sbjct: 623 EKIGDKNNISWNSLVSGLAQSGYFEEALQVFVRMLRTEAEVNMFTYGSAISAAASLANIK 682

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +G +   SM  + G     E    ++ L  +SGS+++A      M    +V+ W   +  
Sbjct: 683 QG-QQIHSMVLKTGYDSEREVSNSLISLYAKSGSISDAWREFNDMS-ERNVISWNAMITG 740

Query: 668 CRVHG 672
              HG
Sbjct: 741 YSQHG 745


>gi|449433131|ref|XP_004134351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 895

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 308/835 (36%), Positives = 478/835 (57%), Gaps = 11/835 (1%)

Query: 29  PPSSSPPFIA-QPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK 86
           P SS   F +  PT +  L N +I  L ++G   +A+     M +K   PD  T+  ++ 
Sbjct: 70  PISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVIN 129

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           SC R  +  LG +VH        E +  I N+LI +YS+  DL+ A  +F+ M N RD V
Sbjct: 130 SCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN-RDSV 188

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW+S+IS Y + G   DA+ M+ +    G  P+ +  S+V+ AC +   V  G  ++G +
Sbjct: 189 SWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
            K G    DV +G  L+ M+ K    L  A +VF KM  K++V W  MI    QLG    
Sbjct: 249 EKIG-IAGDVIIGNGLLSMYFKFE-RLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           +++LF+DMI  GF+PD  +++  + AC +      GK +H + I +G   D      L+D
Sbjct: 307 SVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MYAKC   G +  +++VFD     + ++W ++I GY QSG   KE ++ F  M++ +  P
Sbjct: 366 MYAKC---GDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYY-KEGLESFK-MMKMERKP 420

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           +  TF  +L     L D N    ++   +K G   +  +GNSL+ +YA+ G M+D  K F
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
             +   +++S+NT++ +     +    F++++E+   G+     T   +L   S +    
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G++IH  I KSGFESN  I NALI MYS+C ++E   +VFK M++++V++WT++I+ F 
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG 600

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            +G   +AL+ F  M   G+ P+ + +IA + ACSH+G++ EG + F  M  ++ +  RM
Sbjct: 601 MYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRM 660

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHYAC+VDLL RSG L +A EFI SMP+  D  +W   L ACR  G+T + +  ++ ILE
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILE 720

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            +  D   ++L+SN+YA+ G W+ V  +R  MK + L KE G SWIE   +V+ F  G+ 
Sbjct: 721 LNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK 780

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           S  +  ++   L+ L   + + GY+ D  F LH++EE+ K   L  HSE++A+AFGL++T
Sbjct: 781 SFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNT 840

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
               P+ V KNLRVCGDCHT  KYI+ +  REI++RD+NRFH  KDG CSC D+W
Sbjct: 841 KPGSPLLVMKNLRVCGDCHTVTKYITKIMQREILVRDANRFHRFKDGACSCGDHW 895



 Score =  265 bits (678), Expect = 6e-68,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 311/599 (51%), Gaps = 13/599 (2%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           S LLK+   ++N    + VHSL+  S L  + +    LIS Y++  D   +  +F+S+  
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
             ++  W+S+I +  + G    A+  + EM E    P+ + F +VI +C+   ++ +G I
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++   ++ G F+SD+ +G ALIDM+ +  VDL++A  VF++M+ +++V W  +I+     
Sbjct: 143 VHEHAMEMG-FESDLYIGNALIDMYSR-FVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   DA+ ++    ++G +PD FT+S V+ AC  L     G  +H    + G+A DV +G
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
             L+ MY K      + ++R+VF +M   + ++W  +I GY Q  GR + +VKLF DMI 
Sbjct: 261 NGLLSMYFKFE---RLREARRVFSKMAVKDSVTWNTMICGYAQL-GRHEASVKLFMDMID 316

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
           G V P+  +  S ++ACG   D  V + V+ + +  G   D    N LI MYA+ G +  
Sbjct: 317 GFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLA 375

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A++ F++   K+ V++N++++ Y ++   ++  E    ++      S  TF  LLS  S 
Sbjct: 376 AQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSV-TFVLLLSIFSQ 434

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +  I +G  IH  +IK GFE+   I N+L+ +Y++C  ++   +VF  M   ++ISW ++
Sbjct: 435 LADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTV 494

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I             ++  +M  +G+ P+  T + +L  CS   +  +G K       + G
Sbjct: 495 IASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG-KEIHGYIFKSG 553

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
               +     ++++  + GSL   ++  + M    DV+ W   + A  ++G+   GK A
Sbjct: 554 FESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGE---GKKA 608



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 203/404 (50%), Gaps = 12/404 (2%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTAIITG 361
           + +HS  I +GL+L V     L+  YA+     S   S  VF  +   +NV  W +II  
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPIS---SVSVFRSISPTNNVYLWNSIIRA 95

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
              + G   +A+  +++M + ++ P+ FTF SV+ +C  +LD  +   V+ HA++ G   
Sbjct: 96  LTHN-GLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFES 154

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  +GN+LI MY+R   +++AR  FE +  ++ VS+N+++  Y  N   E A ++ H+  
Sbjct: 155 DLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFR 214

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
            TG+    +T +S+L    S+ A+ +G  +H  I K G   +  I N L+SMY +   + 
Sbjct: 215 MTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLR 274

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF +M  ++ ++W +MI G+A+ G    ++++F  M+ DG  P+ ++  + + AC 
Sbjct: 275 EARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACG 333

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYAC--MVDLLGRSGSLTEALEFIRSMPLSADVL 659
            +G +  G K         G     +  AC  ++D+  + G L  A E   +     D +
Sbjct: 334 QSGDLQVG-KFVHKYLIGSGF--ECDTVACNILIDMYAKCGDLLAAQEVFDTTK-CKDSV 389

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
            W + +      G  + G  + +M+  +   D    +LL ++++
Sbjct: 390 TWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFS 433


>gi|255543164|ref|XP_002512645.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548606|gb|EEF50097.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 716

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 289/720 (40%), Positives = 454/720 (63%), Gaps = 8/720 (1%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R+ VS+ ++I  YV   +  + + +F  +   G   N + F+ +++   + E   + + +
Sbjct: 4   RNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELAYSL 63

Query: 203 YGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +  + K G+ +S+  VG ALID + V GSV+  SA + FD +  K+ V WT M+    + 
Sbjct: 64  HACIYKLGH-ESNAFVGTALIDAYAVCGSVN--SARQAFDAIACKDMVSWTGMVACYAEN 120

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
              +D+++LF +M + GF P+ FT +GV+ AC  LE F+ GK +H   ++T   +D+ VG
Sbjct: 121 DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMDLYVG 180

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
             L+D+Y K    G  +D  +VF+ M  H+V+ W+ +I+ Y QS  + +EAV+LF  M +
Sbjct: 181 VGLLDLYTKF---GDANDVLRVFEEMPKHDVIPWSFMISRYAQSN-QSREAVELFGQMRR 236

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V PN FTFASVL++C ++ +  + +QV+ H +K G   +  V N+L+ +YA+ GR+++
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDN 296

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           + K F  L  +N V++NTM+  Y ++ + +KA  L   + +  V  S  T++S+L   +S
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           + A+  G QIH+  +K+ ++ +  + NALI MY++C +++ A  VF  + +R+ ISW +M
Sbjct: 357 LAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKCGSIKNARLVFDMLSERDEISWNAM 416

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I+G++ HG    AL+ F  M      PN +T++++LSACS+AGL+  G  +F+SM  ++G
Sbjct: 417 ISGYSMHGLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIGQNYFKSMVQDYG 476

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           I   MEHY CMV LLGRSG L +A++ I  +PL  +V VWR  LGAC +H D +LG  +A
Sbjct: 477 IEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGACVIHNDVDLGIMSA 536

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           + IL+ DPQD A H+LLSN+YA    W  VA++RK MK + + KE G SWIE    VH F
Sbjct: 537 QQILQIDPQDEATHVLLSNIYARTRRWNSVASVRKFMKNKGVKKEPGLSWIENQGIVHYF 596

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
            VG+TSHP    I   L+ L +K ++ GY+PD N VL ++E+++K ++L+ HSE++A+AF
Sbjct: 597 SVGDTSHPDMKMISGMLEWLNMKTEKAGYVPDLNAVLRDVEDDEKKRHLWVHSERLALAF 656

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GLI T     IR+ KNLR+C DCH+AIK IS +  R+I++RD NRFHH +DG CSC DYW
Sbjct: 657 GLIRTPSRGHIRILKNLRICTDCHSAIKLISKIVQRDIIIRDMNRFHHFQDGICSCGDYW 716



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/417 (32%), Positives = 228/417 (54%), Gaps = 16/417 (3%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y  ND R Q ++     M   G +P+  T++ +LK+CI    F +GK VH  + ++  E 
Sbjct: 117 YAEND-RFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEM 175

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +   L+ LY+K GD N+  ++F+ M  K D++ WS MIS Y    +  +A+ +F +M
Sbjct: 176 DLYVGVGLLDLYTKFGDANDVLRVFEEMP-KHDVIPWSFMISRYAQSNQSREAVELFGQM 234

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
                 PN++ F++V+++C++ EN+ +G  ++  +LK G  D +V V  AL+D++ K   
Sbjct: 235 RRAFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVG-LDGNVFVSNALMDVYAKCG- 292

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+++ K+F ++  +N V W  MI    Q G    A+ L+ +M+         T S V+ 
Sbjct: 293 RLDNSMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLR 352

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ L     G Q+HS +++T    DV VG +L+DMYAKC   GS+ ++R VFD + + +
Sbjct: 353 ACASLAAMELGTQIHSLSLKTIYDKDVVVGNALIDMYAKC---GSIKNARLVFDMLSERD 409

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQ 409
            +SW A+I+GY    G   EA+K F  M + +  PN  TF S+L AC N  LLD     Q
Sbjct: 410 EISWNAMISGYSMH-GLVGEALKAFQMMQETECVPNKLTFVSILSACSNAGLLDIG---Q 465

Query: 410 VYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            Y  ++ +   ++ C+ +   ++ +  RSG ++ A K  E +  E N+  +  ++ A
Sbjct: 466 NYFKSMVQDYGIEPCMEHYTCMVWLLGRSGHLDKAVKLIEEIPLEPNVKVWRALLGA 522



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 233/450 (51%), Gaps = 14/450 (3%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M ++NTV +  +I    Q     + + LF  +   G   + F  + ++     +E     
Sbjct: 1   MPDRNTVSFVTLIQGYVQSFQLDEVVDLFSRVHREGHELNPFVFTTILKLLVSVECAELA 60

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
             LH+   + G   +  VG +L+D YA C   GSV+ +R+ FD +   +++SWT ++  Y
Sbjct: 61  YSLHACIYKLGHESNAFVGTALIDAYAVC---GSVNSARQAFDAIACKDMVSWTGMVACY 117

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            ++  R +++++LF++M      PNHFTFA VLKAC  L   +V + V+   +K    +D
Sbjct: 118 AEN-DRFQDSLQLFAEMRMVGFNPNHFTFAGVLKACIGLEAFSVGKSVHGCVLKTCYEMD 176

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             VG  L+ +Y + G   D  + FE + + +++ ++ M+  YA++  S +A EL  ++  
Sbjct: 177 LYVGVGLLDLYTKFGDANDVLRVFEEMPKHDVIPWSFMISRYAQSNQSREAVELFGQMRR 236

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             V  + +TFAS+L   +SI  +  G+Q+H  ++K G + N  + NAL+ +Y++C  ++ 
Sbjct: 237 AFVLPNQFTFASVLQSCASIENLQLGKQVHCHVLKVGLDGNVFVSNALMDVYAKCGRLDN 296

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           + ++F E+ +RN ++W +MI G+ + G   +AL ++  ML   ++ + +TY +VL AC+ 
Sbjct: 297 SMKLFMELPNRNEVTWNTMIVGYVQSGDGDKALSLYKNMLECQVQASEVTYSSVLRACAS 356

Query: 603 AGLISEGWK----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
              +  G +      +++YD+  +V        ++D+  + GS+  A   +  M    D 
Sbjct: 357 LAAMELGTQIHSLSLKTIYDKDVVVGN-----ALIDMYAKCGSIKNA-RLVFDMLSERDE 410

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           + W   +    +HG       A +M+ E +
Sbjct: 411 ISWNAMISGYSMHGLVGEALKAFQMMQETE 440


>gi|359495457|ref|XP_003634994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Vitis vinifera]
          Length = 993

 Score =  568 bits (1463), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 294/786 (37%), Positives = 480/786 (61%), Gaps = 8/786 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  T+  +LK+C   ++   G  VH L  +        + NS++ +Y+KC DLN A ++F
Sbjct: 215 DACTFPCILKACGLLKDRRCGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLF 274

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M  K D+VSW+SMIS+Y + G+ ++A+ +F EM +    PN Y F A ++AC ++  +
Sbjct: 275 DRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFI 334

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G  I+  +LK  Y+  +V V  ALI M+ +     E+A  +F  M + +T+ W  M++
Sbjct: 335 KQGMFIHATVLKSSYY-INVFVANALIAMYARFGKMGEAA-NIFYNMDDWDTISWNSMLS 392

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              Q G   +A++ + +M  +G  PD   +  +++A +      +G Q+H++A++ GL  
Sbjct: 393 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDS 452

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           D+ VG SLVDMYAK      +D    +FD+M D +V+SWT II G+ Q+G   + A++LF
Sbjct: 453 DLQVGNSLVDMYAKFCSMKYMD---CIFDKMPDKDVVSWTTIIAGHAQNGSHSR-ALELF 508

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
            ++    +  +    +S+L AC  L   +  ++++++ +++G + D  + N ++ +Y   
Sbjct: 509 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGEC 567

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G ++ A + FE +  K++VS+ +M+  Y  N  + +A EL H +++TGV   + +  S+L
Sbjct: 568 GNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSIL 627

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           S A+S+ A+ KG++IH  +I+ GF     + + L+ MY+RC  +E +  VF  + +++++
Sbjct: 628 SAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLV 687

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
            WTSMI  +  HG    A+++F +M  + I P+ I ++AVL ACSH+GL++EG +   SM
Sbjct: 688 LWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESM 747

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             E+ +    EHY C+VDLLGR+  L EA +F++ M +     VW   LGAC++H + EL
Sbjct: 748 KYEYQLEPWPEHYVCLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKEL 807

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
           G+ AA+ +LE DP++P  ++L+SN+YA+   W+ V  +R RMK   L K  GCSWIE  N
Sbjct: 808 GEIAAQKLLEMDPENPGNYVLVSNVYAAERRWKDVEEVRMRMKASGLKKNPGCSWIEVGN 867

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           KVH F   + SHP++ EIY++L Q+  K+ KE GY+  T FVLH  +EE+KVQ L+ HSE
Sbjct: 868 KVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSE 927

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           ++A+A+G+++T +   +R+ KNLRVCGDCH   K IS    RE+V+RD+NRFHH K G C
Sbjct: 928 RLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVC 987

Query: 856 SCNDYW 861
           SC D W
Sbjct: 988 SCGDVW 993



 Score =  278 bits (711), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 200/704 (28%), Positives = 368/704 (52%), Gaps = 33/704 (4%)

Query: 13  PPPSSFKPSNPSRQNL---PPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTL-DL 68
           P PS +   +P  + +   PP     F  +P  +  L  R I     G V +A  +L DL
Sbjct: 47  PIPSFYLNCHPVLKKIHQNPPLKISKFPLKPVETPSL--REI--CKRGSVNEAFQSLTDL 102

Query: 69  M-TQKGNHPDLD-TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSK 125
              Q  +   LD  YS +L+ C   +    G+ VH+ +  S    NSV L++ L+ +Y K
Sbjct: 103 FANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGK 162

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG L +A K+F  M +K  I +W++MI +YV  G+ + ++ ++ EM   G   +   F  
Sbjct: 163 CGCLVDAEKLFDGMPHK-TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPC 221

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++AC   ++   G  ++G  +K GY  S V V  +++ M+ K + DL  A ++FD+M E
Sbjct: 222 ILKACGLLKDRRCGAEVHGLAIKEGYV-SIVFVANSIVGMYTKCN-DLNGARQLFDRMPE 279

Query: 246 K-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           K + V W  MI+  +  G   +A+RLF +M  +   P+ +T    + AC +      G  
Sbjct: 280 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 339

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  +++   ++V V  +L+ MYA+    G + ++  +F  M D + +SW ++++G+VQ
Sbjct: 340 IHATVLKSSYYINVFVANALIAMYARF---GKMGEAANIFYNMDDWDTISWNSMLSGFVQ 396

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           + G   EA++ + +M      P+     S++ A     ++    Q++ +A+K G   D  
Sbjct: 397 N-GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDLQ 455

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           VGNSL+ MYA+   M+     F+ + +K++VS+ T++  +A+N +  +A EL  E++  G
Sbjct: 456 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG 515

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +       +S+L   S +  I   ++IH+ II+ G  S+  + N ++ +Y  C NV+ A 
Sbjct: 516 IDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAA 574

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           ++F+ +E ++V+SWTSMI+ +  +G A  ALE+F+ M   G++P+ I+ +++LSA +   
Sbjct: 575 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 634

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA---LEFIRSMPLSADVLVW 661
            + +G K         G V      + +VD+  R G+L ++     FIR    + D+++W
Sbjct: 635 ALKKG-KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR----NKDLVLW 689

Query: 662 RTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYA 703
            + + A  +HG    G+ A ++   +E +   P     ++ LYA
Sbjct: 690 TSMINAYGMHG---CGRAAIDLFRRMEDESIAPDHIAFVAVLYA 730



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 269/498 (54%), Gaps = 9/498 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G+  +A+     M +    P+  T+   L++C  S     G  +H+ + +S    N  
Sbjct: 295 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 354

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+LI++Y++ G + EA  IF +M +  D +SW+SM+S +V  G   +A+  + EM + 
Sbjct: 355 VANALIAMYARFGKMGEAANIFYNM-DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDA 413

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+     ++I A + + N   G  I+ + +K G  DSD+ VG +L+DM+ K    ++
Sbjct: 414 GQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNG-LDSDLQVGNSLVDMYAK-FCSMK 471

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
               +FDKM +K+ V WT +I    Q G    A+ LF ++ L G   D   +S ++ ACS
Sbjct: 472 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS 531

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L+L +S K++HS+ IR GL+ D+ +   +VD+Y +C   G+VD + ++F+ +   +V+S
Sbjct: 532 GLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGEC---GNVDYAARMFELIEFKDVVS 587

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WT++I+ YV +G  + EA++LF  M +  V P+  +  S+L A  +L      ++++   
Sbjct: 588 WTSMISCYVHNGLAN-EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFL 646

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +++G  L+  + ++L+ MYAR G +E +R  F  +  K+LV + +M++AY  +     A 
Sbjct: 647 IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAI 706

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISM 533
           +L   +ED  +      F ++L   S  G + +G + + +   +   E     Y  L+ +
Sbjct: 707 DLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYVCLVDL 766

Query: 534 YSRCANVEAAFQVFKEME 551
             R  ++E A+Q  K ME
Sbjct: 767 LGRANHLEEAYQFVKGME 784



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 186/347 (53%), Gaps = 12/347 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G   +A+     M   G  PDL     ++ +  RS N   G  +H+   ++ L+ + 
Sbjct: 395 VQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLNGMQIHAYAMKNGLDSDL 454

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + NSL+ +Y+K   +   + IF  M +K D+VSW+++I+ +   G    A+ +F E+  
Sbjct: 455 QVGNSLVDMYAKFCSMKYMDCIFDKMPDK-DVVSWTTIIAGHAQNGSHSRALELFREVQL 513

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G   +    S+++ ACS  + ++    I+ ++++ G   SD+ +   ++D++ + G+VD
Sbjct: 514 EGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SDLVLQNGIVDVYGECGNVD 571

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
              A ++F+ +  K+ V WT MI+     G   +A+ LF  M  +G  PD  +L  ++SA
Sbjct: 572 Y--AARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSA 629

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L     GK++H + IR G  L+  +  +LVDMYA+C   G+++ SR VF+ + + ++
Sbjct: 630 AASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARC---GTLEKSRNVFNFIRNKDL 686

Query: 353 MSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           + WT++I  Y   G GR   A+ LF  M    +AP+H  F +VL AC
Sbjct: 687 VLWTSMINAYGMHGCGR--AAIDLFRRMEDESIAPDHIAFVAVLYAC 731



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/212 (25%), Positives = 100/212 (47%), Gaps = 13/212 (6%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G   +A+    LM + G  PD  +   +L +         GK +H  L R      
Sbjct: 595 YVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLE 654

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + ++L+ +Y++CG L ++  +F  + NK D+V W+SMI++Y   G    AI +F  M 
Sbjct: 655 GSLASTLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMHGCGRAAIDLFRRME 713

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGH-----IIYGFLLKCGYFDSDVCVGCALIDMFV 227
           +    P+   F AV+ ACS++  +  G      + Y + L+  + +  VC    L+D+  
Sbjct: 714 DESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLE-PWPEHYVC----LVDLLG 768

Query: 228 KGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           + +  LE AY+    M  E     W  ++  C
Sbjct: 769 RAN-HLEEAYQFVKGMEVEPTAEVWCALLGAC 799


>gi|359472776|ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 896

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 327/888 (36%), Positives = 508/888 (57%), Gaps = 44/888 (4%)

Query: 5   SLPAPAKIPPPSSFKPS-NPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAI 63
           S P+    PPPS  KP+ +P     PP  + P  +  +  + L +R     ND R  +AI
Sbjct: 22  SPPSLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRT--RSNDFR--EAI 77

Query: 64  FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNSLISL 122
            T   MT  G  PD   +  +LK+    ++   G+ +H+   +     +SV + N+L+++
Sbjct: 78  STYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNM 137

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
           Y KCG + +  K+F  + + RD VSW+S I++     K   A+  F  M       + + 
Sbjct: 138 YGKCGGIGDVCKVFDRITD-RDQVSWNSFIAALCRFEKWEQALEAFRAMQMENMELSSFT 196

Query: 183 FSAVIRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
             +V  ACSN      + +G  ++G+ L+ G  D       AL+ M+ K G VD   A  
Sbjct: 197 LVSVALACSNLGVMHGLRLGKQLHGYSLRVG--DQKTFTNNALMAMYAKLGRVDDSKA-- 252

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +F+   +++ V W  MI+  +Q     +A+  F  M+L G   D  T++ V+ ACS LE 
Sbjct: 253 LFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSHLER 312

Query: 299 FTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              GK++H++ +R   L  +  VG +LVDMY  C     V+  R+VFD +L   +  W A
Sbjct: 313 LDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR---QVESGRRVFDHILGRRIELWNA 369

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           +I+GY ++G  D++A+ LF +MI+   + PN  T ASV+ AC +    +  E ++ +AVK
Sbjct: 370 MISGYARNG-LDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVK 428

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   D  V N+L+ MY+R G+M+ +   F+S+  ++ VS+NTM+  Y  +     A  L
Sbjct: 429 LGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVL 488

Query: 477 LHEI---EDTGVGT--------------SAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           LHE+   E+T                  +A T  ++L G +++ AI KG++IHA  I++ 
Sbjct: 489 LHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIHAYAIRNM 548

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             S+  + +AL+ MY++C  +  + +VF EM ++NVI+W  +I     HG    ALE+F 
Sbjct: 549 LASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFK 608

Query: 580 KMLADG-----IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
            M+A+       KPN +T+I V +ACSH+GLISEG   F  M  +HG+    +HYAC+VD
Sbjct: 609 NMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVD 668

Query: 635 LLGRSGSLTEALEFIRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA 693
           LLGR+G L EA E + +MP   D V  W + LGACR+H + ELG+ AA+ +L  +P   +
Sbjct: 669 LLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVAS 728

Query: 694 AHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLE 753
            ++LLSN+Y+SAG W     +RK M++  + KE GCSWIE  ++VHKF  G+ SHP++ +
Sbjct: 729 HYVLLSNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQ 788

Query: 754 IYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIR 813
           ++  L+ L+ K+++ GY+PDT+ VLH ++E++K   L  HSEK+A+AFG+++T     IR
Sbjct: 789 LHGFLETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIR 848

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           V KNLRVC DCH A K+IS +  REI++RD  RFHH K+G CSC DYW
Sbjct: 849 VAKNLRVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 896


>gi|147801171|emb|CAN62238.1| hypothetical protein VITISV_014689 [Vitis vinifera]
          Length = 957

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 294/786 (37%), Positives = 480/786 (61%), Gaps = 8/786 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  T+  +LK+C   ++   G  VH L  +        + NS++ +Y+KC DLN A ++F
Sbjct: 179 DACTFPCILKACGLLKDRRYGAEVHGLAIKEGYVSIVFVANSIVGMYTKCNDLNGARQLF 238

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M  K D+VSW+SMIS+Y + G+ ++A+ +F EM +    PN Y F A ++AC ++  +
Sbjct: 239 DRMPEKEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFI 298

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G  I+  +LK  Y+  +V V  ALI M+ +     E+A  +F  M + +T+ W  M++
Sbjct: 299 KQGMFIHATVLKSSYY-INVFVANALIAMYARFGKMGEAA-NIFYNMDDWDTISWNSMLS 356

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              Q G   +A++ + +M  +G  PD   +  +++A +       G Q+H++A++ GL  
Sbjct: 357 GFVQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDS 416

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           D+ VG SLVDMYAK      +D    +FD+M D +V+SWT II G+ Q+G   + A++LF
Sbjct: 417 DLQVGNSLVDMYAKFCSMKYMD---CIFDKMPDKDVVSWTTIIAGHAQNGSHSR-ALELF 472

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
            ++    +  +    +S+L AC  L   +  ++++++ +++G + D  + N ++ +Y   
Sbjct: 473 REVQLEGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGEC 531

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G ++ A + FE +  K++VS+ +M+  Y  N  + +A EL H +++TGV   + +  S+L
Sbjct: 532 GNVDYAARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSIL 591

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           S A+S+ A+ KG++IH  +I+ GF     + + L+ MY+RC  +E +  VF  + +++++
Sbjct: 592 SAAASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLV 651

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
            WTSMI  +  HG    A+++F +M  + I P+ I ++AVL ACSH+GL++EG +   SM
Sbjct: 652 LWTSMINAYGMHGCGRAAIDLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESM 711

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             E+ +    EHYAC+VDLLGR+  L EA +F++ M +     VW   LGAC++H + EL
Sbjct: 712 KYEYQLEPWPEHYACLVDLLGRANHLEEAYQFVKGMEVEPTAEVWCALLGACQIHSNKEL 771

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
           G+ AA+ +LE DP++P  ++L+SN+Y++   W+ V  +R RMK   L K  GCSWIE  N
Sbjct: 772 GEIAAQKLLEMDPENPGNYVLVSNVYSAERRWKDVEXVRMRMKASGLKKNPGCSWIEVGN 831

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           KVH F   + SHP++ EIY++L Q+  K+ KE GY+  T FVLH  +EE+KVQ L+ HSE
Sbjct: 832 KVHTFMARDKSHPQSYEIYSKLSQITEKLAKEGGYVAQTKFVLHNAKEEEKVQMLYGHSE 891

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           ++A+A+G+++T +   +R+ KNLRVCGDCH   K IS    RE+V+RD+NRFHH K G C
Sbjct: 892 RLAIAYGMLTTPEGASLRITKNLRVCGDCHNFCKLISKFFERELVMRDANRFHHFKGGVC 951

Query: 856 SCNDYW 861
           SC D W
Sbjct: 952 SCGDVW 957



 Score =  277 bits (709), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 200/704 (28%), Positives = 368/704 (52%), Gaps = 33/704 (4%)

Query: 13  PPPSSFKPSNPSRQNL---PPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTL-DL 68
           P PS +   +P  + +   PP     F  +P  +  L  R I     G V +A  +L DL
Sbjct: 11  PIPSFYLNCHPVLKKIHQNPPLKISKFPLKPVETPSL--REI--CKRGSVNEAFQSLTDL 66

Query: 69  M-TQKGNHPDLD-TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSK 125
              Q  +   LD  YS +L+ C   +    G+ VH+ +  S    NSV L++ L+ +Y K
Sbjct: 67  FANQSPSQFSLDEAYSSVLELCGSKKALSEGQQVHAHMITSNALFNSVFLSTRLVFMYGK 126

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG L +A K+F  M +K  I +W++MI +YV  G+ + ++ ++ EM   G   +   F  
Sbjct: 127 CGCLVDAEKLFDGMPHK-TIFTWNAMIGAYVTNGEPLGSLELYREMRVSGIPLDACTFPC 185

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++AC   ++   G  ++G  +K GY  S V V  +++ M+ K + DL  A ++FD+M E
Sbjct: 186 ILKACGLLKDRRYGAEVHGLAIKEGYV-SIVFVANSIVGMYTKCN-DLNGARQLFDRMPE 243

Query: 246 K-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           K + V W  MI+  +  G   +A+RLF +M  +   P+ +T    + AC +      G  
Sbjct: 244 KEDVVSWNSMISAYSSNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMF 303

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  +++   ++V V  +L+ MYA+    G + ++  +F  M D + +SW ++++G+VQ
Sbjct: 304 IHATVLKSSYYINVFVANALIAMYARF---GKMGEAANIFYNMDDWDTISWNSMLSGFVQ 360

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           + G   EA++ + +M      P+     S++ A     ++    Q++ +A+K G   D  
Sbjct: 361 N-GLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDLQ 419

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           VGNSL+ MYA+   M+     F+ + +K++VS+ T++  +A+N +  +A EL  E++  G
Sbjct: 420 VGNSLVDMYAKFCSMKYMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEG 479

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +       +S+L   S +  I   ++IH+ II+ G  S+  + N ++ +Y  C NV+ A 
Sbjct: 480 IDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL-SDLVLQNGIVDVYGECGNVDYAA 538

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           ++F+ +E ++V+SWTSMI+ +  +G A  ALE+F+ M   G++P+ I+ +++LSA +   
Sbjct: 539 RMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLS 598

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA---LEFIRSMPLSADVLVW 661
            + +G K         G V      + +VD+  R G+L ++     FIR    + D+++W
Sbjct: 599 ALKKG-KEIHGFLIRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIR----NKDLVLW 653

Query: 662 RTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYA 703
            + + A  +HG    G+ A ++   +E +   P     ++ LYA
Sbjct: 654 TSMINAYGMHG---CGRAAIDLFRRMEDESIAPDHIAFVAVLYA 694



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 269/498 (54%), Gaps = 9/498 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G+  +A+     M +    P+  T+   L++C  S     G  +H+ + +S    N  
Sbjct: 259 SNGQSIEALRLFGEMQKASLAPNTYTFVAALQACEDSSFIKQGMFIHATVLKSSYYINVF 318

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+LI++Y++ G + EA  IF +M +  D +SW+SM+S +V  G   +A+  + EM + 
Sbjct: 319 VANALIAMYARFGKMGEAANIFYNM-DDWDTISWNSMLSGFVQNGLYHEALQFYHEMRDA 377

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+     ++I A + + N   G  I+ + +K G  DSD+ VG +L+DM+ K    ++
Sbjct: 378 GQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNG-LDSDLQVGNSLVDMYAK-FCSMK 435

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
               +FDKM +K+ V WT +I    Q G    A+ LF ++ L G   D   +S ++ ACS
Sbjct: 436 YMDCIFDKMPDKDVVSWTTIIAGHAQNGSHSRALELFREVQLEGIDLDVMMISSILLACS 495

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L+L +S K++HS+ IR GL+ D+ +   +VD+Y +C   G+VD + ++F+ +   +V+S
Sbjct: 496 GLKLISSVKEIHSYIIRKGLS-DLVLQNGIVDVYGEC---GNVDYAARMFELIEFKDVVS 551

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WT++I+ YV +G  + EA++LF  M +  V P+  +  S+L A  +L      ++++   
Sbjct: 552 WTSMISCYVHNGLAN-EALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFL 610

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +++G  L+  + ++L+ MYAR G +E +R  F  +  K+LV + +M++AY  +     A 
Sbjct: 611 IRKGFVLEGSLASTLVDMYARCGTLEKSRNVFNFIRNKDLVLWTSMINAYGMHGCGRAAI 670

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISM 533
           +L   +ED  +      F ++L   S  G + +G + + +   +   E     Y  L+ +
Sbjct: 671 DLFRRMEDESIAPDHIAFVAVLYACSHSGLMNEGRRFLESMKYEYQLEPWPEHYACLVDL 730

Query: 534 YSRCANVEAAFQVFKEME 551
             R  ++E A+Q  K ME
Sbjct: 731 LGRANHLEEAYQFVKGME 748



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 102/347 (29%), Positives = 186/347 (53%), Gaps = 12/347 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G   +A+     M   G  PDL     ++ +  RS N   G  +H+   ++ L+ + 
Sbjct: 359 VQNGLYHEALQFYHEMRDAGQKPDLVAVISIIAASARSGNTLHGMQIHAYAMKNGLDSDL 418

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + NSL+ +Y+K   +   + IF  M +K D+VSW+++I+ +   G    A+ +F E+  
Sbjct: 419 QVGNSLVDMYAKFCSMKYMDCIFDKMPDK-DVVSWTTIIAGHAQNGSHSRALELFREVQL 477

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G   +    S+++ ACS  + ++    I+ ++++ G   SD+ +   ++D++ + G+VD
Sbjct: 478 EGIDLDVMMISSILLACSGLKLISSVKEIHSYIIRKGL--SDLVLQNGIVDVYGECGNVD 535

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
              A ++F+ +  K+ V WT MI+     G   +A+ LF  M  +G  PD  +L  ++SA
Sbjct: 536 Y--AARMFELIEFKDVVSWTSMISCYVHNGLANEALELFHLMKETGVEPDSISLVSILSA 593

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L     GK++H + IR G  L+  +  +LVDMYA+C   G+++ SR VF+ + + ++
Sbjct: 594 AASLSALKKGKEIHGFLIRKGFVLEGSLASTLVDMYARC---GTLEKSRNVFNFIRNKDL 650

Query: 353 MSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           + WT++I  Y   G GR   A+ LF  M    +AP+H  F +VL AC
Sbjct: 651 VLWTSMINAYGMHGCGR--AAIDLFRRMEDESIAPDHIAFVAVLYAC 695



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/141 (28%), Positives = 72/141 (51%), Gaps = 1/141 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G   +A+    LM + G  PD  +   +L +         GK +H  L R      
Sbjct: 559 YVHNGLANEALELFHLMKETGVEPDSISLVSILSAAASLSALKKGKEIHGFLIRKGFVLE 618

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + ++L+ +Y++CG L ++  +F  + NK D+V W+SMI++Y   G    AI +F  M 
Sbjct: 619 GSLASTLVDMYARCGTLEKSRNVFNFIRNK-DLVLWTSMINAYGMHGCGRAAIDLFRRME 677

Query: 173 ELGFCPNEYCFSAVIRACSNT 193
           +    P+   F AV+ ACS++
Sbjct: 678 DESIAPDHIAFVAVLYACSHS 698


>gi|147845321|emb|CAN83351.1| hypothetical protein VITISV_028907 [Vitis vinifera]
          Length = 948

 Score =  566 bits (1459), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 305/837 (36%), Positives = 487/837 (58%), Gaps = 15/837 (1%)

Query: 29  PPSSSPPF-IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLK 86
           P SS   F +A P+ +    N +I  L    +     +L   TQ+    PD  T+  ++ 
Sbjct: 123 PTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVIN 182

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C    +F + K +H  +       +  I N+LI +Y +  DL++A K+F+ M   RD+V
Sbjct: 183 ACAGLLDFEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEM-PLRDVV 241

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW+S+IS Y   G   +A+ ++     LG  P+ Y  S+V+RAC    +V  G II+G +
Sbjct: 242 SWNSLISGYNANGYWNEALEIYYRFRNLGVVPDSYTMSSVLRACGGLGSVEEGDIIHGLI 301

Query: 207 LKCGYFDSDVCVGCALIDMFVK--GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
            K G    DV V   L+ M+ K  G +D     ++FDKM  ++ V W  MI   +Q+G  
Sbjct: 302 EKIG-IKKDVIVNNGLLSMYCKFNGLID---GRRIFDKMVLRDAVSWNTMICGYSQVGLY 357

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            ++I+LF++M+ + F PD  T++ ++ AC  L     GK +H + I +G   D      L
Sbjct: 358 EESIKLFMEMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNIL 416

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           ++MYAKC   G++  S++VF  M   + +SW ++I  Y+Q+G  D EA+KLF  M++  V
Sbjct: 417 INMYAKC---GNLLASQEVFSGMKCKDSVSWNSMINVYIQNGSFD-EAMKLFK-MMKTDV 471

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            P+  T+  +L     L D  + ++++    K G   +  V N+L+ MYA+ G M D+ K
Sbjct: 472 KPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMGFNSNIVVSNTLVDMYAKCGEMGDSLK 531

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            FE++  ++++++NT++ +   + +      ++  +   GV     T  S+L   S + A
Sbjct: 532 VFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPVCSLLAA 591

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
             +G++IH  I K G ES+  + N LI MYS+C ++  +FQVFK M+ ++V++WT++I+ 
Sbjct: 592 KRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISA 651

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
              +G   +A+  F +M A GI P+ + ++A++ ACSH+GL+ EG  +F  M  ++ I  
Sbjct: 652 CGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEP 711

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           R+EHYAC+VDLL RS  L +A +FI SMPL  D  +W   L ACR+ GDTE+ +  +E I
Sbjct: 712 RIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAQRVSERI 771

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
           +E +P D   ++L+SN+YA+ G W+ V +IRK +K R L K+ GCSW+E  NKV+ F  G
Sbjct: 772 IELNPDDTGYYVLVSNVYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKVYVFGTG 831

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
                +  E+   L  LA  + + GY+ +  FVLH+++E++K   L  HSE++A+AFGL+
Sbjct: 832 TKFSEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLAIAFGLL 891

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T    P++V KNLRVC DCHT  KYIS +  RE+++RD+NRFH  KDG CSC DYW
Sbjct: 892 NTKPGTPLQVMKNLRVCEDCHTVTKYISKIXQRELLVRDANRFHVFKDGACSCGDYW 948



 Score =  269 bits (687), Expect = 6e-69,   Method: Compositional matrix adjust.
 Identities = 172/625 (27%), Positives = 320/625 (51%), Gaps = 17/625 (2%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +HSL+    L  + +    LI+ Y+   D   +  +F+      ++  W+S+I +  + G
Sbjct: 94  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNG 153

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A+ ++ E   +   P+ Y F +VI AC+   +  +   I+  +L  G F SD+ +G
Sbjct: 154 LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLXMG-FGSDLYIG 212

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            ALIDM+ + + DL+ A KVF++M  ++ V W  +I+     G   +A+ ++      G 
Sbjct: 213 NALIDMYCRFN-DLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYRFRNLGV 271

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +PD +T+S V+ AC  L     G  +H    + G+  DV V   L+ MY  C  +G + D
Sbjct: 272 VPDSYTMSSVLRACGGLGSVEEGDIIHGLIEKIGIKKDVIVNNGLLSMY--CKFNGLI-D 328

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            R++FD+M+  + +SW  +I GY Q G  + E++KLF +M+  Q  P+  T  S+L+ACG
Sbjct: 329 GRRIFDKMVLRDAVSWNTMICGYSQVGLYE-ESIKLFMEMVN-QFKPDLLTITSILQACG 386

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
           +L D    + V+ + +  G   D    N LI+MYA+ G +  +++ F  +  K+ VS+N+
Sbjct: 387 HLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNS 446

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M++ Y +N + ++A +L   ++ T V   + T+  LLS ++ +G +  G+++H  + K G
Sbjct: 447 MINVYIQNGSFDEAMKLFKMMK-TDVKPDSVTYVMLLSMSTQLGDLXLGKELHCDLAKMG 505

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F SN  + N L+ MY++C  +  + +VF+ M+ R++I+W ++I            L +  
Sbjct: 506 FNSNIVVSNTLVDMYAKCGEMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMIS 565

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M  +G+ P+  T +++L  CS      +G K       + G+   +     ++++  + 
Sbjct: 566 RMRTEGVTPDMATMLSILPVCSLLAAKRQG-KEIHGCIFKLGLESDVPVGNVLIEMYSKC 624

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ----DPAAH 695
           GSL  + +  + M  + DV+ W   + AC ++G+   GK A     E +      D  A 
Sbjct: 625 GSLRNSFQVFKLMK-TKDVVTWTALISACGMYGE---GKKAVRAFGEMEAAGIVPDHVAF 680

Query: 696 ILLSNLYASAGHWEYVANIRKRMKE 720
           + +    + +G  E   N   RMK+
Sbjct: 681 VAIIFACSHSGLVEEGLNYFHRMKK 705



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 92/205 (44%), Gaps = 15/205 (7%)

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           K   +LHE     +      F+S+    +S     +  ++H+ II  G   +      LI
Sbjct: 61  KTLRVLHECSRQTL------FSSISRALASAATTTQLHKLHSLIITLGLHHSVIFSAKLI 114

Query: 532 SMYSRCANVEAAFQVFK-EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + Y+   +  ++F VF+      NV  W S+I     +G  + AL ++ +     ++P+ 
Sbjct: 115 AKYAHFRDPTSSFSVFRLASPSNNVYXWNSIIRALTHNGLFSEALSLYSETQRIRLQPDT 174

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDE---HGIVQRMEHYACMVDLLGRSGSLTEALE 647
            T+ +V++AC  AGL+   ++  +S++D     G    +     ++D+  R   L +A +
Sbjct: 175 YTFPSVINAC--AGLLD--FEMAKSIHDRVLXMGFGSDLYIGNALIDMYCRFNDLDKARK 230

Query: 648 FIRSMPLSADVLVWRTFLGACRVHG 672
               MPL  DV+ W + +     +G
Sbjct: 231 VFEEMPLR-DVVSWNSLISGYNANG 254


>gi|255559863|ref|XP_002520950.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539787|gb|EEF41367.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 835

 Score =  565 bits (1456), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 298/810 (36%), Positives = 477/810 (58%), Gaps = 8/810 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G    A+     M   G   D  T+ +LLK+C    +   G  +H L  +   +  
Sbjct: 33  YVSNGEALGALEMYREMRHLGVSFDSYTFPVLLKACGIVEDLFCGAEIHGLAIKYGCDSF 92

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             ++NSL++LY+KC D+N A K+F  M  + D+VSW+S+IS+Y   G   +A+ +F EML
Sbjct: 93  VFVVNSLVALYAKCNDINGARKLFDRMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEML 152

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           + G   N Y F+A ++AC ++  + +G  I+  +LK G    DV V  AL+ M+V+    
Sbjct: 153 KAGVVTNTYTFAAALQACEDSSFIKLGMQIHAAILKSGRV-LDVYVANALVAMYVRFGKM 211

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E+A  +F  +  K+ V W  M+T   Q G   +A+  F D+  +   PD+ ++  ++ A
Sbjct: 212 PEAAV-IFGNLEGKDIVTWNSMLTGFIQNGLYSEALEFFYDLQNADLKPDQVSIISIIVA 270

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
              L    +GK++H++AI+ G   ++ VG +L+DMYAKC     +    + FD M   ++
Sbjct: 271 SGRLGYLLNGKEIHAYAIKNGFDSNILVGNTLIDMYAKCC---CMSYGGRAFDLMAHKDL 327

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT    GY Q+     +A++L   +    +  +     S+L AC  L      ++++ 
Sbjct: 328 ISWTTAAAGYAQNKCY-LQALELLRQLQMEGMDVDATMIGSILLACRGLNCLGKIKEIHG 386

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + + RG   D  + N++I +Y   G ++ A + FES+  K++VS+ +M+  Y  N  + K
Sbjct: 387 YTI-RGGLSDPVLQNTIIDVYGECGIIDYAVRIFESIECKDVVSWTSMISCYVHNGLANK 445

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A E+   +++TG+     T  S+LS   S+  + KG++IH  II+ GF     I N L+ 
Sbjct: 446 ALEVFSSMKETGLEPDYVTLVSILSAVCSLSTLKKGKEIHGFIIRKGFILEGSISNTLVD 505

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY+RC +VE A+++F   ++RN+I WT+MI+ +  HG+   A+E+F +M  + I P+ IT
Sbjct: 506 MYARCGSVEDAYKIFTCTKNRNLILWTAMISAYGMHGYGEAAVELFMRMKDEKIIPDHIT 565

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++A+L ACSH+GL++EG      M  E+ +    EHY C+VDLLGR   L EA + ++SM
Sbjct: 566 FLALLYACSHSGLVNEGKSFLEIMKCEYQLEPWPEHYTCLVDLLGRRNCLEEAYQIVKSM 625

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
                  VW   LGACR+H + E+G+ AAE +LE D  +P  ++L+SN++A+ G W+ V 
Sbjct: 626 QNEPTPEVWCALLGACRIHSNKEIGEVAAEKLLELDLDNPGNYVLVSNVFAANGRWKDVE 685

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK-EFGYL 771
            +R RMK   L K  GCSWIE  NK+H F   +  HP+  +IY +L Q+  K+K E GY+
Sbjct: 686 EVRMRMKGSGLTKNPGCSWIEVGNKIHAFLSRDKLHPECDKIYQKLAQVTEKLKREGGYV 745

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
             T FVLH + EE+KVQ L+ HSE++A+A+GL++T++  PIRV KNLRVCGDCH+    +
Sbjct: 746 AQTKFVLHNVGEEEKVQMLYGHSERLAIAYGLLATAEGTPIRVTKNLRVCGDCHSFCTLV 805

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S    RE+++RD++RFHH KDG CSC D+W
Sbjct: 806 SRFFERELIVRDASRFHHFKDGMCSCGDFW 835



 Score =  277 bits (708), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 171/587 (29%), Positives = 321/587 (54%), Gaps = 16/587 (2%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y KCG + +A  IF  M ++R I +W++M+  YV+ G+ + A+ M+ EM  LG   + Y
Sbjct: 1   MYGKCGSVLDAEMIFDKM-SERSIFTWNAMMGGYVSNGEALGALEMYREMRHLGVSFDSY 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F  +++AC   E++  G  I+G  +K G  DS V V  +L+ ++ K + D+  A K+FD
Sbjct: 60  TFPVLLKACGIVEDLFCGAEIHGLAIKYG-CDSFVFVVNSLVALYAKCN-DINGARKLFD 117

Query: 242 KMTEKN-TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           +M  +N  V W  +I+  +  G   +A+ LF +M+ +G + + +T +  + AC +     
Sbjct: 118 RMYVRNDVVSWNSIISAYSGNGMCTEALCLFSEMLKAGVVTNTYTFAAALQACEDSSFIK 177

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G Q+H+  +++G  LDV V  +LV MY +    G + ++  +F  +   ++++W +++T
Sbjct: 178 LGMQIHAAILKSGRVLDVYVANALVAMYVRF---GKMPEAAVIFGNLEGKDIVTWNSMLT 234

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G++Q+ G   EA++ F D+    + P+  +  S++ A G L      ++++ +A+K G  
Sbjct: 235 GFIQN-GLYSEALEFFYDLQNADLKPDQVSIISIIVASGRLGYLLNGKEIHAYAIKNGFD 293

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +  VGN+LI MYA+   M    +AF+ +  K+L+S+ T    YA+N    +A ELL ++
Sbjct: 294 SNILVGNTLIDMYAKCCCMSYGGRAFDLMAHKDLISWTTAAAGYAQNKCYLQALELLRQL 353

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  G+   A    S+L     +  +GK ++IH   I+ G  S+  + N +I +Y  C  +
Sbjct: 354 QMEGMDVDATMIGSILLACRGLNCLGKIKEIHGYTIRGGL-SDPVLQNTIIDVYGECGII 412

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A ++F+ +E ++V+SWTSMI+ +  +G A +ALE+F  M   G++P+ +T +++LSA 
Sbjct: 413 DYAVRIFESIECKDVVSWTSMISCYVHNGLANKALEVFSSMKETGLEPDYVTLVSILSAV 472

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
                + +G K         G +        +VD+  R GS+ +A + I +   + ++++
Sbjct: 473 CSLSTLKKG-KEIHGFIIRKGFILEGSISNTLVDMYARCGSVEDAYK-IFTCTKNRNLIL 530

Query: 661 WRTFLGACRVHGDTELGKHAAEMILE-QDPQDPAAHI-LLSNLYASA 705
           W   + A  +HG    G+ A E+ +  +D +    HI  L+ LYA +
Sbjct: 531 WTAMISAYGMHG---YGEAAVELFMRMKDEKIIPDHITFLALLYACS 574


>gi|302760843|ref|XP_002963844.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
 gi|300169112|gb|EFJ35715.1| hypothetical protein SELMODRAFT_80662 [Selaginella moellendorffii]
          Length = 781

 Score =  565 bits (1455), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 297/790 (37%), Positives = 474/790 (60%), Gaps = 14/790 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD   +  LL+ C  ++N   G+ VH  +     E N+++   LI +Y++CG + EA ++
Sbjct: 2   PDTAFFVALLQRCSSAKNVDHGRRVHWHVRDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 61

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ +  ++D+ +W+ MI  Y  +G    A+ MF +M E    P +  + A++ AC++TE+
Sbjct: 62  FEIL-ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 120

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  G  I+G +L+ G F+ DV VG ALI+M+ K GSV    A+  F ++  ++ V WT M
Sbjct: 121 LKDGMEIHGQILQQG-FEGDVFVGTALINMYNKCGSV--RGAWDSFKRLEHRDVVSWTAM 177

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I  C Q      A  L+  M L G +P++ TL  V +A  +    + GK ++       +
Sbjct: 178 IAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPNYLSEGKFVYGLVSSGVM 237

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             DV V  S V+M+      G + D+R++F+ M+D +V++W  +IT YVQ+     EAV+
Sbjct: 238 ESDVRVMNSAVNMFGNA---GLLGDARRLFEDMVDRDVVTWNIVITLYVQNENFG-EAVR 293

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF  + Q  V  N  TF  +L    +L      + ++    + G   D  V  +L+S+Y 
Sbjct: 294 LFGRLQQDGVKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYG 353

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           R      A K F  +  K+++++  M  AYA+N   ++A +L  E++  G   ++ T  +
Sbjct: 354 RCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVA 413

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   + + A+ KG QIH+ II++ F     +  ALI+MY +C  +  A  VF++M  R+
Sbjct: 414 VLDTCAHLAALQKGRQIHSHIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRD 473

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           ++ W SM+  +A+HG+    L++F +M  DG+K + +++++VLSA SH+G +++G+++F 
Sbjct: 474 ILVWNSMLGAYAQHGYYDETLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFV 533

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA---DVLVWRTFLGACRVH 671
           +M  +  I    E Y C+VDLLGR+G + EA++ +  + LS    D ++W T LGACR H
Sbjct: 534 AMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIV--LKLSGCLPDGILWMTLLGACRTH 591

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
             T+  K AAE +LE+DP    A+++LSN+YA+AG W+ V  +RK M+ R + KE G S 
Sbjct: 592 NKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSS 651

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           IE  N+VH+F  G+ SHP+   IYAELD L  +++  GY+PDT  +LH++E+E+K   LF
Sbjct: 652 IEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLF 711

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSE++A+AFGLIST    P+RV KNLRVC DCHTA KYIS + GREI++RD++RFH+ K
Sbjct: 712 YHSERLAIAFGLISTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFK 771

Query: 852 DGKCSCNDYW 861
           DG+CSC DYW
Sbjct: 772 DGRCSCKDYW 781



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 153/634 (24%), Positives = 294/634 (46%), Gaps = 15/634 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G   +A+     M ++   P   TY  +L +C  + +   G  +H  + +   E +
Sbjct: 80  YCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGD 139

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +LI++Y+KCG +  A   FK +   RD+VSW++MI++ V   +   A  ++  M 
Sbjct: 140 VFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHDQFALARWLYRRMQ 198

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN+     V  A  +   ++ G  +YG L+  G  +SDV V  + ++MF    + 
Sbjct: 199 LDGVVPNKITLYTVFNAYGDPNYLSEGKFVYG-LVSSGVMESDVRVMNSAVNMFGNAGL- 256

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A ++F+ M +++ V W ++IT   Q     +A+RLF  +   G   +  T   +++ 
Sbjct: 257 LGDARRLFEDMVDRDVVTWNIVITLYVQNENFGEAVRLFGRLQQDGVKANDITFVLMLNV 316

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L     GK +H      G   D  V  +L+ +Y +C   G    + K+F  M   +V
Sbjct: 317 YTSLTSLAKGKVIHELVKEAGYDRDAVVATALMSLYGRCEAPGQ---AWKIFVDMGSKDV 373

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++WT +   Y Q+G R KEA++LF +M      P   T  +VL  C +L       Q+++
Sbjct: 374 ITWTVMCVAYAQNGFR-KEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHS 432

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H ++    ++  V  +LI+MY + G+M +A   FE + +++++ +N+M+ AYA++   ++
Sbjct: 433 HIIENRFRMEMVVETALINMYGKCGKMAEAMSVFEKMAKRDILVWNSMLGAYAQHGYYDE 492

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALI 531
             +L ++++  GV   A +F S+LS  S  G++  G Q    +++         +Y  ++
Sbjct: 493 TLQLFNQMQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVV 552

Query: 532 SMYSRCANVEAAFQVFKEMED--RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            +  R   ++ A  +  ++     + I W +++     H    +A     ++L      +
Sbjct: 553 DLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHS 612

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEF 648
           G  Y+ VLS    A    +G    R +    G+  + E     +++L R     E     
Sbjct: 613 G-AYV-VLSNVYAAAGDWDGVNRMRKLMRSRGV--KKEPGRSSIEILNRVHEFLEGDRSH 668

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
            R  P+ A++ V  + + A     DT++  H  E
Sbjct: 669 PRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVE 702



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 80/158 (50%), Gaps = 1/158 (0%)

Query: 51  IYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
           + +  +G  ++A+     M  +G  P   T   +L +C        G+ +HS +  ++  
Sbjct: 381 VAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENRFR 440

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
              V+  +LI++Y KCG + EA  +F+ M  KRDI+ W+SM+ +Y   G   + + +F +
Sbjct: 441 MEMVVETALINMYGKCGKMAEAMSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFNQ 499

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           M   G   +   F +V+ A S++ +V  G+  +  +L+
Sbjct: 500 MQLDGVKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQ 537


>gi|224122590|ref|XP_002330519.1| predicted protein [Populus trichocarpa]
 gi|222872453|gb|EEF09584.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  563 bits (1451), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 288/733 (39%), Positives = 446/733 (60%), Gaps = 13/733 (1%)

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A ++F  M  K   VSW+++++ Y   G     + +F +M E     +++  S V++ C+
Sbjct: 4   AERLFFGMPEKNG-VSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKGCA 62

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVG 250
           NT ++  G +++   L+ G  + D  +GC+L+DM+ K G+V    A KVF K+   + V 
Sbjct: 63  NTGSLREGKVLHALALRSGC-EIDEFLGCSLVDMYSKCGTV--YDALKVFTKIRNPDVVA 119

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W+ MIT   Q G  ++A  LF  M   G  P++FTLS +VS  + +     G+ +H    
Sbjct: 120 WSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCIC 179

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV--QSGGR 368
           + G   D  V   L+ MY K      V+D  KVF+ M + +++SW A+++G+   Q+ GR
Sbjct: 180 KYGFESDNLVSNPLIMMYMKSRC---VEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
                ++F  M+     PN FTF SVL++C +LLD    +QV+ H +K     DD VG +
Sbjct: 237 ---GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTA 293

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L+ MYA++  +EDA  AF+ L  +++ S+  ++  YA+   +EKA +   +++  G+  +
Sbjct: 294 LVDMYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPN 353

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            YT AS LSG S +  +  G Q+HA  +K+G   +  + +AL+ +Y +C  +E A  +FK
Sbjct: 354 EYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAEAIFK 413

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
            +  R+++SW ++I+G+++HG   +ALE F  ML++GI P+  T+I VLSACS  GL+ E
Sbjct: 414 GLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSACSFMGLVEE 473

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           G K F SM   +GI   +EHYACMVD+LGR+G   E   FI  M L+   L+W T LGAC
Sbjct: 474 GKKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEMNLTPYSLIWETVLGAC 533

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           ++HG+ + G+ AA+ + E +P   +++ILLSN++AS G W+ V NIR  M  R + KE G
Sbjct: 534 KLHGNVDFGEKAAKKLFEMEPMMDSSYILLSNIFASKGRWDDVRNIRALMTSRGIKKEPG 593

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
           CSW+E D +VH F   + SHPK  EIYA+LD+L   +   GY+P T  VLH +  ++K++
Sbjct: 594 CSWVEVDGQVHVFLSQDGSHPKIREIYAKLDKLGQSLMSIGYVPKTEVVLHNVSNKEKME 653

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
           +L+ HSE++A++F L+ST+  KPIR+FKNLR+C DCH  +K IS +T +EIV+RD  RFH
Sbjct: 654 HLYYHSERLALSFALLSTNAVKPIRIFKNLRICEDCHDFMKLISDITNQEIVVRDIRRFH 713

Query: 849 HIKDGKCSCNDYW 861
           H K G CSC D W
Sbjct: 714 HFKRGTCSCQDRW 726



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 147/461 (31%), Positives = 245/461 (53%), Gaps = 18/461 (3%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A ++F  M EKN V W  ++    QLG  +  ++LF  M        +FTLS V+  
Sbjct: 1   MELAERLFFGMPEKNGVSWNALLNGYAQLGDGKKVLKLFCKMKECETKFSKFTLSTVLKG 60

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       GK LH+ A+R+G  +D  +GCSLVDMY+KC   G+V D+ KVF ++ + +V
Sbjct: 61  CANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKC---GTVYDALKVFTKIRNPDV 117

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W+A+ITG  Q  G  +EA +LF  M +    PN FT +S++    N+ D    + ++ 
Sbjct: 118 VAWSAMITGLDQQ-GHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHG 176

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
              K G   D+ V N LI MY +S  +ED  K FE++   +LVS+N ++  +  +    +
Sbjct: 177 CICKYGFESDNLVSNPLIMMYMKSRCVEDGNKVFEAMTNPDLVSWNALLSGFYDSQTCGR 236

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
              + +++   G   + +TF S+L   SS+     G+Q+HA IIK+  + +  +  AL+ 
Sbjct: 237 GPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDFVGTALVD 296

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++   +E A   F  + +R++ SWT +I+G+A+   A +A++ F +M  +GIKPN  T
Sbjct: 297 MYAKARCLEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYT 356

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY------ACMVDLLGRSGSLTEAL 646
             + LS CSH   +  G    R +   H +  +  H+      + +VDL G+ G +  A 
Sbjct: 357 LASCLSGCSHMATLENG----RQL---HAVAVKAGHFGDIFVGSALVDLYGKCGCMEHAE 409

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
              + + +S D++ W T +     HG  E    A  M+L +
Sbjct: 410 AIFKGL-ISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSE 449



 Score =  245 bits (626), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 163/515 (31%), Positives = 266/515 (51%), Gaps = 28/515 (5%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T S +LK C  + +   GK++H+L  RS  E +  +  SL+ +YSKCG + +A K+F  +
Sbjct: 53  TLSTVLKGCANTGSLREGKVLHALALRSGCEIDEFLGCSLVDMYSKCGTVYDALKVFTKI 112

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            N  D+V+WS+MI+    +G   +A  +F  M   G  PN++  S+++   +N  ++  G
Sbjct: 113 RNP-DVVAWSAMITGLDQQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYG 171

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+G + K G F+SD  V   LI M++K    +E   KVF+ MT  + V W  +++   
Sbjct: 172 QSIHGCICKYG-FESDNLVSNPLIMMYMKSRC-VEDGNKVFEAMTNPDLVSWNALLSGFY 229

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                    R+F  M+L GF P+ FT   V+ +CS L     GKQ+H+  I+     D  
Sbjct: 230 DSQTCGRGPRIFYQMLLEGFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDF 289

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG +LVDMYAK      ++D+   FDR+++ ++ SWT II+GY Q+   +K AVK F  M
Sbjct: 290 VGTALVDMYAKARC---LEDAGVAFDRLVNRDIFSWTVIISGYAQTDQAEK-AVKYFRQM 345

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +  + PN +T AS L  C ++       Q++  AVK G   D  VG++L+ +Y + G M
Sbjct: 346 QREGIKPNEYTLASCLSGCSHMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKCGCM 405

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           E A   F+ L  +++VS+NT++  Y+++   EKA E    +   G+     TF  +LS  
Sbjct: 406 EHAEAIFKGLISRDIVSWNTIISGYSQHGQGEKALEAFRMMLSEGIMPDEATFIGVLSAC 465

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIY--NALISMYSRCANVEAAFQVFKE----MEDR 553
           S +G + +G        K  F+S   IY  N  I  Y+   ++      F E    +E+ 
Sbjct: 466 SFMGLVEEG--------KKRFDSMSKIYGINPSIEHYACMVDILGRAGKFNEVKIFIEEM 517

Query: 554 NV----ISWTSMITGFAKHG---FAARALEIFYKM 581
           N+    + W +++     HG   F  +A +  ++M
Sbjct: 518 NLTPYSLIWETVLGACKLHGNVDFGEKAAKKLFEM 552



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/344 (31%), Positives = 186/344 (54%), Gaps = 7/344 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
             G  Q+A     LM +KG  P+  T S L+ +     +   G+ +H  + +   E +++
Sbjct: 129 QQGHGQEAAELFHLMRRKGARPNQFTLSSLVSTATNMGDLRYGQSIHGCICKYGFESDNL 188

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N LI +Y K   + + NK+F++M N  D+VSW++++S + +         +F +ML  
Sbjct: 189 VSNPLIMMYMKSRCVEDGNKVFEAMTNP-DLVSWNALLSGFYDSQTCGRGPRIFYQMLLE 247

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           GF PN + F +V+R+CS+  +   G  ++  ++K    D D  VG AL+DM+ K    LE
Sbjct: 248 GFKPNMFTFISVLRSCSSLLDPEFGKQVHAHIIKNSSDDDDF-VGTALVDMYAKARC-LE 305

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A   FD++  ++   WT++I+   Q      A++ F  M   G  P+ +TL+  +S CS
Sbjct: 306 DAGVAFDRLVNRDIFSWTVIISGYAQTDQAEKAVKYFRQMQREGIKPNEYTLASCLSGCS 365

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            +    +G+QLH+ A++ G   D+ VG +LVD+Y KC   G ++ +  +F  ++  +++S
Sbjct: 366 HMATLENGRQLHAVAVKAGHFGDIFVGSALVDLYGKC---GCMEHAEAIFKGLISRDIVS 422

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           W  II+GY Q G  +K A++ F  M+   + P+  TF  VL AC
Sbjct: 423 WNTIISGYSQHGQGEK-ALEAFRMMLSEGIMPDEATFIGVLSAC 465


>gi|302780040|ref|XP_002971795.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
 gi|300160927|gb|EFJ27544.1| hypothetical protein SELMODRAFT_95653 [Selaginella moellendorffii]
          Length = 782

 Score =  563 bits (1450), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 296/790 (37%), Positives = 475/790 (60%), Gaps = 14/790 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD   +  LL+ C  ++N   G+ VH  +     E N+++   LI +Y++CG + EA ++
Sbjct: 3   PDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQCGSVPEAQQV 62

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ +  ++D+ +W+ MI  Y  +G    A+ MF +M E    P +  + A++ AC++TE+
Sbjct: 63  FEIL-ERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTES 121

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  G  I+G +L+ G F+ DV VG ALI+M+ K GSV    A+  F ++  ++ V WT M
Sbjct: 122 LKDGMEIHGQILQQG-FEGDVFVGTALINMYNKCGSV--RGAWDSFKRLEHRDVVSWTAM 178

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I  C Q      A  L+  M L G +P++ TL  V +A  +    + GK ++S      +
Sbjct: 179 IAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSRVM 238

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             DV V  S ++M+      G + D+R++F+ M+D +V++W  +IT YVQ+     EAV+
Sbjct: 239 ESDVRVMNSAMNMFGNA---GLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFG-EAVR 294

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF  + Q  +  N  TF  +L    +L      + ++    + G   D  V  +L+S+Y 
Sbjct: 295 LFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYG 354

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           R      A K F  +  K+++++  M  AYA+N   ++A +L  E++  G   ++ T  +
Sbjct: 355 RCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSATLVA 414

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   + + A+ KG QIH+ II++GF     +  ALI+MY +C  +  A  VF++M  R+
Sbjct: 415 VLDTCAHLAALQKGRQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRD 474

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           ++ W SM+  +A+HG+    L++F +M  DG K + +++++VLSA SH+G +++G+++F 
Sbjct: 475 ILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFV 534

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA---DVLVWRTFLGACRVH 671
           +M  +  I    E Y C+VDLLGR+G + EA++ +  + LS    D ++W T LGACR H
Sbjct: 535 AMLQDFSITPTPELYGCVVDLLGRAGRIQEAVDIV--LKLSGCLPDGILWMTLLGACRTH 592

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
             T+  K AAE +LE+DP    A+++LSN+YA+AG W+ V  +RK M+ R + KE G S 
Sbjct: 593 NKTDQAKAAAEQVLERDPSHSGAYVVLSNVYAAAGDWDGVNRMRKLMRSRGVKKEPGRSS 652

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           IE  N+VH+F  G+ SHP+   IYAELD L  +++  GY+PDT  +LH++E+E+K   LF
Sbjct: 653 IEILNRVHEFLEGDRSHPRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVEDERKEDMLF 712

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSE++A+AFGL+ST    P+RV KNLRVC DCHTA KYIS + GREI++RD++RFH+ K
Sbjct: 713 YHSERLAIAFGLMSTPPGTPLRVIKNLRVCSDCHTATKYISKLRGREILVRDTHRFHNFK 772

Query: 852 DGKCSCNDYW 861
           DG+CSC DYW
Sbjct: 773 DGRCSCKDYW 782



 Score =  245 bits (625), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 149/500 (29%), Positives = 263/500 (52%), Gaps = 14/500 (2%)

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
           F P+   F A+++ CS+ +NV  G  ++  +   G+  +++  G  LI M+ + GSV   
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCG-HLIQMYAQCGSV--P 57

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A +VF+ +  K+   WT MI    Q G    A+ +F  M     +P + T   +++AC+
Sbjct: 58  EAQQVFEILERKDVFAWTRMIGIYCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACA 117

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
             E    G ++H   ++ G   DV VG +L++MY KC   GSV  +   F R+   +V+S
Sbjct: 118 STESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKC---GSVRGAWDSFKRLEHRDVVS 174

Query: 355 WTAIITGYVQSGGRDKEAVK--LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           WTA+I   VQ    D+ A+   L+  M    V PN  T  +V  A G+    +  + +Y+
Sbjct: 175 WTAMIAACVQ---HDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYS 231

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
               R    D  V NS ++M+  +G + DAR+ FE + ++++V++N ++  Y +N N  +
Sbjct: 232 LVSSRVMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGE 291

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  L   ++  G+  +  TF  +L+  +S+ ++ KG+ IH  + ++G++ +  +  AL+S
Sbjct: 292 AVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGYDRDVVVATALMS 351

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y RC     A+++F +M  ++VI+WT M   +A++GF   AL++F +M  +G +P   T
Sbjct: 352 LYGRCEAPGQAWKIFVDMGSKDVITWTVMCVAYAQNGFRKEALQLFQEMQLEGRRPTSAT 411

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            +AVL  C+H   + +G +   S   E+G    M     ++++ G+ G + EA      M
Sbjct: 412 LVAVLDTCAHLAALQKG-RQIHSHIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKM 470

Query: 653 PLSADVLVWRTFLGACRVHG 672
               D+LVW + LGA   HG
Sbjct: 471 A-KRDILVWNSMLGAYAQHG 489



 Score =  202 bits (513), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 154/634 (24%), Positives = 294/634 (46%), Gaps = 15/634 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G   +A+     M ++   P   TY  +L +C  + +   G  +H  + +   E +
Sbjct: 81  YCQQGDYDRALGMFYQMQEEDVMPTKVTYVAILNACASTESLKDGMEIHGQILQQGFEGD 140

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +LI++Y+KCG +  A   FK +   RD+VSW++MI++ V   +   A  ++  M 
Sbjct: 141 VFVGTALINMYNKCGSVRGAWDSFKRL-EHRDVVSWTAMIAACVQHDQFALARWLYRRMQ 199

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN+     V  A  +   ++ G  IY  L+     +SDV V  + ++MF    + 
Sbjct: 200 LDGVVPNKITLYTVFNAYGDPHYLSEGKFIYS-LVSSRVMESDVRVMNSAMNMFGNAGL- 257

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A ++F+ M +++ V W ++IT   Q     +A+RLF  +   G   +  T   +++ 
Sbjct: 258 LGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNV 317

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L     GK +H      G   DV V  +L+ +Y +C   G    + K+F  M   +V
Sbjct: 318 YTSLTSLAKGKVIHELVKEAGYDRDVVVATALMSLYGRCEAPGQ---AWKIFVDMGSKDV 374

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++WT +   Y Q+G R KEA++LF +M      P   T  +VL  C +L       Q+++
Sbjct: 375 ITWTVMCVAYAQNGFR-KEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHS 433

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H ++ G  ++  V  +LI+MY + G+M +AR  FE + +++++ +N+M+ AYA++   ++
Sbjct: 434 HIIENGFRMEMVVETALINMYGKCGKMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDE 493

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALI 531
             +L ++++  G    A +F S+LS  S  G++  G Q    +++         +Y  ++
Sbjct: 494 TLQLFNQMQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQDFSITPTPELYGCVV 553

Query: 532 SMYSRCANVEAAFQVFKEMED--RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            +  R   ++ A  +  ++     + I W +++     H    +A     ++L      +
Sbjct: 554 DLLGRAGRIQEAVDIVLKLSGCLPDGILWMTLLGACRTHNKTDQAKAAAEQVLERDPSHS 613

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEF 648
           G  Y+ VLS    A    +G    R +    G+  + E     +++L R     E     
Sbjct: 614 G-AYV-VLSNVYAAAGDWDGVNRMRKLMRSRGV--KKEPGRSSIEILNRVHEFLEGDRSH 669

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
            R  P+ A++ V  + + A     DT++  H  E
Sbjct: 670 PRRHPIYAELDVLNSEMRAAGYIPDTKMILHDVE 703



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 102/425 (24%), Positives = 206/425 (48%), Gaps = 11/425 (2%)

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           F PD      ++  CS  +    G+++H      G   +  V   L+ MYA+C   GSV 
Sbjct: 1   FKPDTAFFVALLQRCSSAKNVDHGRRVHWHVCDRGFEQNNLVCGHLIQMYAQC---GSVP 57

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           ++++VF+ +   +V +WT +I  Y Q G  D+ A+ +F  M +  V P   T+ ++L AC
Sbjct: 58  EAQQVFEILERKDVFAWTRMIGIYCQQGDYDR-ALGMFYQMQEEDVMPTKVTYVAILNAC 116

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +        +++   +++G   D  VG +LI+MY + G +  A  +F+ L  +++VS+ 
Sbjct: 117 ASTESLKDGMEIHGQILQQGFEGDVFVGTALINMYNKCGSVRGAWDSFKRLEHRDVVSWT 176

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+ A  ++     A  L   ++  GV  +  T  ++ +       + +G+ I++ +   
Sbjct: 177 AMIAACVQHDQFALARWLYRRMQLDGVVPNKITLYTVFNAYGDPHYLSEGKFIYSLVSSR 236

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
             ES+  + N+ ++M+     +  A ++F++M DR+V++W  +IT + ++     A+ +F
Sbjct: 237 VMESDVRVMNSAMNMFGNAGLLGDARRLFEDMVDRDVVTWNIVITFYVQNENFGEAVRLF 296

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
            ++  DGIK N IT++ +L+  +    +++G K    +  E G  + +     ++ L GR
Sbjct: 297 GRLQQDGIKANDITFVLMLNVYTSLTSLAKG-KVIHELVKEAGYDRDVVVATALMSLYGR 355

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ--DPQDPAAHI 696
             +  +A +    M  S DV+ W      C  +      K A ++  E   + + P +  
Sbjct: 356 CEAPGQAWKIFVDMG-SKDVITWTVM---CVAYAQNGFRKEALQLFQEMQLEGRRPTSAT 411

Query: 697 LLSNL 701
           L++ L
Sbjct: 412 LVAVL 416



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 69/255 (27%), Positives = 126/255 (49%), Gaps = 3/255 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           + +++ +    +A+     + Q G   +  T+ L+L       +   GK++H L+  +  
Sbjct: 280 ITFYVQNENFGEAVRLFGRLQQDGIKANDITFVLMLNVYTSLTSLAKGKVIHELVKEAGY 339

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + + V+  +L+SLY +C    +A KIF  MG+K D+++W+ M  +Y   G + +A+ +F 
Sbjct: 340 DRDVVVATALMSLYGRCEAPGQAWKIFVDMGSK-DVITWTVMCVAYAQNGFRKEALQLFQ 398

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           EM   G  P      AV+  C++   +  G  I+  +++ G F  ++ V  ALI+M+ K 
Sbjct: 399 EMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENG-FRMEMVVETALINMYGKC 457

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              +  A  VF+KM +++ + W  M+    Q G   + ++LF  M L G   D  +   V
Sbjct: 458 G-KMAEARSVFEKMAKRDILVWNSMLGAYAQHGYYDETLQLFNQMQLDGEKADAVSFVSV 516

Query: 290 VSACSELELFTSGKQ 304
           +SA S     T G Q
Sbjct: 517 LSALSHSGSVTDGYQ 531



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/158 (25%), Positives = 79/158 (50%), Gaps = 1/158 (0%)

Query: 51  IYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
           + +  +G  ++A+     M  +G  P   T   +L +C        G+ +HS +  +   
Sbjct: 382 VAYAQNGFRKEALQLFQEMQLEGRRPTSATLVAVLDTCAHLAALQKGRQIHSHIIENGFR 441

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
              V+  +LI++Y KCG + EA  +F+ M  KRDI+ W+SM+ +Y   G   + + +F +
Sbjct: 442 MEMVVETALINMYGKCGKMAEARSVFEKMA-KRDILVWNSMLGAYAQHGYYDETLQLFNQ 500

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           M   G   +   F +V+ A S++ +V  G+  +  +L+
Sbjct: 501 MQLDGEKADAVSFVSVLSALSHSGSVTDGYQYFVAMLQ 538


>gi|125552577|gb|EAY98286.1| hypothetical protein OsI_20194 [Oryza sativa Indica Group]
          Length = 874

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/865 (35%), Positives = 506/865 (58%), Gaps = 23/865 (2%)

Query: 8   APAKIPPPSSFKPSNPSRQNL------PPSSSPPFIAQPTTSEPL-SNRLIY-HLNDGRV 59
           AP ++P   + + S P+R         PP +  P    P     + +NR+++ +   G V
Sbjct: 22  APEQVPKLLATRAS-PARVEDGVCLRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMV 80

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NS 118
            + +    +  + G   D  T S +LK+C    +  LG+ +H L  +   +   V    S
Sbjct: 81  PEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTS 140

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+ +Y KCG + E  ++F+ M  K+++V+W+S+++   +     + + +F  M   G  P
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGM-PKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWP 199

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N + F++V+ A ++   + +G  ++   +K G   S V V  +L++M+ K  + +E A  
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFG-CRSSVFVCNSLMNMYAKCGL-VEDAKS 257

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VF+ M  ++ V W  ++       C  +A++LF +   +     + T + V+  C+ L+ 
Sbjct: 258 VFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQ 317

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTA 357
               +QLHS  ++ G  L   V  +L D Y+KC   G + D+  +F       NV+SWTA
Sbjct: 318 LALARQLHSCVLKHGFHLTGNVMTALADAYSKC---GELADALNIFSMTTGSRNVVSWTA 374

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           II+G +Q+G     AV LFS M + +V PN FT++++LKA  ++L      Q++   +K 
Sbjct: 375 IISGCIQNGD-IPLAVVLFSRMREDRVMPNEFTYSAMLKASLSIL----PPQIHAQVIKT 429

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                  VG +L++ Y++ G  EDA   F+ + +K++V+++ M+  +A+  + E A  L 
Sbjct: 430 NYQHIPSVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLF 489

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGA-IGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
           +++   G+  + +T +S++   +   A + +G Q HA  IK  +    C+ +AL+SMYSR
Sbjct: 490 NKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSR 549

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
             N+++A  VF+   DR+++SW SMI+G+A+HG++ +A+E F +M A GI+ +G+T++AV
Sbjct: 550 KGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAV 609

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           +  C+H GL+ EG ++F SM  +H I   MEHYACMVDL  R+G L E +  IR MP  A
Sbjct: 610 IMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPA 669

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
             +VWRT LGACRVH + ELGK +A+ +L  +P D + ++LLSN+YA+AG W+    +RK
Sbjct: 670 GAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRK 729

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M  R + KEAGCSWI+  NKVH F   + SHP + +IY +L  +  ++K+ GY P+T+F
Sbjct: 730 LMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSF 789

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH++ E+QK   L  HSE++A+AFGLI+T    P+++ KNLRVCGDCH  +K +SM+  
Sbjct: 790 VLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIED 849

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REI++RD +RFHH   G CSC D+W
Sbjct: 850 REIIMRDCSRFHHFNGGACSCGDFW 874


>gi|449465002|ref|XP_004150218.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
 gi|449500809|ref|XP_004161200.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Cucumis sativus]
          Length = 926

 Score =  562 bits (1449), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 294/798 (36%), Positives = 466/798 (58%), Gaps = 15/798 (1%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           L + + ++ DL  Y  +L+ C   ++   G+ V S++  S +  + ++   L+ +Y KCG
Sbjct: 140 LCSSQNSNFDLGAYCSILQLCAERKSIRDGRRVRSIIESSGVMIDGILGVKLVFMYVKCG 199

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           DL E   +F  +   + I  W+ MIS Y   G   ++I++F +MLELG  PN Y FS+++
Sbjct: 200 DLKEGRMVFDKLSESK-IFLWNLMISEYSGSGNYGESINLFKQMLELGIKPNSYTFSSIL 258

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           +  +    V  G  ++G + K G F+S   V  +LI  +  G   +  A K+FD++T+++
Sbjct: 259 KCFAAVARVEEGRQVHGLICKLG-FNSYNTVVNSLISFYFVGR-KVRCAQKLFDELTDRD 316

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            + W  MI+   + G     I +F+ M++ G   D  T+  V  AC+ +     GK LHS
Sbjct: 317 VISWNSMISGYVKNGLDDRGIEIFIKMLVFGVDIDLATMVNVFVACANIGTLLLGKVLHS 376

Query: 308 WAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           ++I+   L  +V    +L+DMY+KC   G ++ + +VF+RM +  V+SWT++ITGYV+ G
Sbjct: 377 YSIKAATLDREVRFNNTLLDMYSKC---GDLNSAIRVFERMDEKTVVSWTSMITGYVREG 433

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDD 423
             D  A+KLF +M    V P+ +   S+L AC   GNL    +   V+ +  +     + 
Sbjct: 434 LSDG-AIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKI---VHDYIRENNLETNS 489

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N+L  MYA+ G M+DA   F  + +K+++S+NTM+  Y KN    +A  L  E++  
Sbjct: 490 FVSNALTDMYAKCGSMKDAHDVFSHMKKKDVISWNTMIGGYTKNSLPNEALTLFAEMQRE 549

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
                  T A +L   +S+ A+ KG +IH   +++G+  +  + NA++ MY +C  +  A
Sbjct: 550 S-KPDGTTVACILPACASLAALDKGREIHGYALRNGYSEDKYVTNAVVDMYVKCGLLVLA 608

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
             +F  + +++++SWT MI G+  HG+ + A+  F +M   GI+P+ +++I++L ACSH+
Sbjct: 609 RSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYACSHS 668

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL+ EGWK F  M  E  I   +EHYACMVDLL R+G+L +A +FI++MP+  D  +W  
Sbjct: 669 GLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLARTGNLVKAHKFIKAMPIKPDATIWGA 728

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L  CR+H D +L +  AE I E +P++   ++LL+N+YA A  WE V  +RK++ +R L
Sbjct: 729 LLCGCRIHHDVKLAEKVAERIFELEPENTGYYVLLANIYAEAEKWEEVQKLRKKIGQRGL 788

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K  GCSWIE   K++ F  G+ S P+  +I   L +L  K+KE GY P T + L   +E
Sbjct: 789 KKNPGCSWIEIKGKINIFVAGDCSKPQAKKIELLLKRLRSKMKEEGYSPKTAYALLNADE 848

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
            +K   L  HSEK+A+AFG+++    K IRV KNLRVCGDCH   K++S    REI+LRD
Sbjct: 849 REKEVALCGHSEKLAMAFGMLNLPPGKTIRVTKNLRVCGDCHEMAKFMSKSASREIILRD 908

Query: 844 SNRFHHIKDGKCSCNDYW 861
           S+RFHH KDG CSC  YW
Sbjct: 909 SSRFHHFKDGSCSCRGYW 926



 Score =  233 bits (594), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 157/544 (28%), Positives = 272/544 (50%), Gaps = 11/544 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   ++I     M + G  P+  T+S +LK          G+ VH L+ +      + ++
Sbjct: 230 GNYGESINLFKQMLELGIKPNSYTFSSILKCFAAVARVEEGRQVHGLICKLGFNSYNTVV 289

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLIS Y     +  A K+F  + + RD++SW+SMIS YV  G     I +F++ML  G 
Sbjct: 290 NSLISFYFVGRKVRCAQKLFDELTD-RDVISWNSMISGYVKNGLDDRGIEIFIKMLVFGV 348

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +      V  AC+N   + +G +++ + +K    D +V     L+DM+ K   DL SA
Sbjct: 349 DIDLATMVNVFVACANIGTLLLGKVLHSYSIKAATLDREVRFNNTLLDMYSKCG-DLNSA 407

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF++M EK  V WT MIT   + G    AI+LF +M   G +PD + ++ +++AC+  
Sbjct: 408 IRVFERMDEKTVVSWTSMITGYVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAIN 467

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
               SGK +H +     L  +  V  +L DMYAKC   GS+ D+  VF  M   +V+SW 
Sbjct: 468 GNLKSGKIVHDYIRENNLETNSFVSNALTDMYAKC---GSMKDAHDVFSHMKKKDVISWN 524

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I GY ++     EA+ LF++M Q +  P+  T A +L AC +L   +   +++ +A++
Sbjct: 525 TMIGGYTKN-SLPNEALTLFAEM-QRESKPDGTTVACILPACASLAALDKGREIHGYALR 582

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G + D  V N+++ MY + G +  AR  F+ +  K+LVS+  M+  Y  +    +A   
Sbjct: 583 NGYSEDKYVTNAVVDMYVKCGLLVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINT 642

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYS 535
            +++  TG+     +F S+L   S  G + +G +I   + K    E N   Y  ++ + +
Sbjct: 643 FNQMRMTGIEPDEVSFISILYACSHSGLLDEGWKIFNIMKKECQIEPNLEHYACMVDLLA 702

Query: 536 RCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           R  N+  A +  K M  + +   W +++ G   H     A ++  ++    ++P    Y 
Sbjct: 703 RTGNLVKAHKFIKAMPIKPDATIWGALLCGCRIHHDVKLAEKVAERIFE--LEPENTGYY 760

Query: 595 AVLS 598
            +L+
Sbjct: 761 VLLA 764



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 78/250 (31%), Positives = 131/250 (52%), Gaps = 4/250 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G    AI   D M  +G  PD+   + +L +C  + N   GK+VH  +  + LE N
Sbjct: 429 YVREGLSDGAIKLFDEMKSRGVVPDVYAVTSILNACAINGNLKSGKIVHDYIRENNLETN 488

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S + N+L  +Y+KCG + +A+ +F  M  K+D++SW++MI  Y       +A+ +F EM 
Sbjct: 489 SFVSNALTDMYAKCGSMKDAHDVFSHM-KKKDVISWNTMIGGYTKNSLPNEALTLFAEM- 546

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +    P+    + ++ AC++   +  G  I+G+ L+ GY   D  V  A++DM+VK  + 
Sbjct: 547 QRESKPDGTTVACILPACASLAALDKGREIHGYALRNGY-SEDKYVTNAVVDMYVKCGL- 604

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  +FD +  K+ V WT+MI      G   +AI  F  M ++G  PD  +   ++ A
Sbjct: 605 LVLARSLFDMIPNKDLVSWTVMIAGYGMHGYGSEAINTFNQMRMTGIEPDEVSFISILYA 664

Query: 293 CSELELFTSG 302
           CS   L   G
Sbjct: 665 CSHSGLLDEG 674


>gi|225449798|ref|XP_002272111.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 849

 Score =  562 bits (1448), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 299/787 (37%), Positives = 466/787 (59%), Gaps = 15/787 (1%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           HP     ++LL+ C   +  H  + +  L+ ++ L    +    L+SL+ K G L+EA +
Sbjct: 78  HPS----AILLELCTSMKELH--QFI-PLIIKNGLYSEHLFQTKLVSLFCKFGSLHEAAR 130

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F+ + +K D + + +M+  Y       DA+  F  M   G  P  Y F+ +++ C +  
Sbjct: 131 VFQPIEDKIDEL-YHTMLKGYARNSSLDDAVSFFCRMRYDGVRPVVYNFTYLLKVCGDNA 189

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G  I+  L+  G F S+V     +++M+ K  + +E AYK+FD+M E++ V W  +
Sbjct: 190 DLRKGKEIHCQLIVNG-FASNVFAMTGVVNMYAKCRL-VEEAYKMFDRMPERDLVCWNTI 247

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+   Q G  + A+ L L M   G  PD  T+  ++ A +++     G+ +H +++R G 
Sbjct: 248 ISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILPAVADVGSLRIGRSIHGYSMRAGF 307

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
              V V  +LVDMY+KC   GSV  +R +FDRM    V+SW ++I GYVQ+G     A++
Sbjct: 308 ESFVNVSTALVDMYSKC---GSVGTARLIFDRMTGKTVVSWNSMIDGYVQNGD-PGAAME 363

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           +F  M+  QV   + T    L AC +L D      V+    +     D  V NSLISMY+
Sbjct: 364 IFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHKLLDQLELGSDVSVMNSLISMYS 423

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           +  R++ A + FE+L  K LVS+N M+  YA+N    +A +   +++   +   ++T  S
Sbjct: 424 KCKRVDIAAEIFENLQHKTLVSWNAMILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVS 483

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           ++   + +  + + + IH  +I++  + N  +  AL+ MY++C  V  A ++F  M++R+
Sbjct: 484 VIPALAELSVLPQAKWIHGLVIRTCLDKNVFVATALVDMYAKCGAVHTARKLFDMMDERH 543

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V +W +MI G+  HG    ALE+F KM  + IKPN +T++ VLSACSH+GL+ EG+++F 
Sbjct: 544 VTTWNAMIDGYGTHGLGKAALELFEKMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFG 603

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM  ++G+   M+HY  MVDLLGR+  L EA +FI+ MP+   + V+   LGACR+H + 
Sbjct: 604 SMKKDYGLEPAMDHYGAMVDLLGRANRLNEAWDFIQKMPIEPAISVFGAMLGACRIHKNV 663

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           ELG+ AA  I + DP D   H+LL+N+YA+A  W+ VA +R  M+++ + K  G S +E 
Sbjct: 664 ELGEKAANRIFDLDPDDGGYHVLLANIYATASMWDKVARVRTTMEKKGIQKTPGWSVVEL 723

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
            N+VH F+ G TSHP+  +IYA L+ L  +IK  GY+PDTN V H++E+  K Q L  HS
Sbjct: 724 QNEVHTFYSGTTSHPQAKKIYAFLETLGNRIKAAGYMPDTNSV-HDVEDVVKEQLLNSHS 782

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           EK+A+AF L++TS    I + KNLRVCGDCH A KYIS+VT REI++RD  RFHH KDG 
Sbjct: 783 EKLAIAFSLLNTSPGTTIHLRKNLRVCGDCHNATKYISLVTKREIIVRDMRRFHHFKDGT 842

Query: 855 CSCNDYW 861
           CSC DYW
Sbjct: 843 CSCGDYW 849



 Score =  218 bits (554), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/493 (29%), Positives = 247/493 (50%), Gaps = 14/493 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P +  ++ LLK C  + +   GK +H  L  +    N   +  ++++Y+KC  
Sbjct: 166 MRYDGVRPVVYNFTYLLKVCGDNADLRKGKEIHCQLIVNGFASNVFAMTGVVNMYAKCRL 225

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EA K+F  M  +RD+V W+++IS Y   G    A+ + + M E G  P+     +++ 
Sbjct: 226 VEEAYKMFDRM-PERDLVCWNTIISGYAQNGFGKTALELVLRMQEEGKRPDSITIVSILP 284

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A ++  ++ IG  I+G+ ++ G F+S V V  AL+DM+ K GSV   +A  +FD+MT K 
Sbjct: 285 AVADVGSLRIGRSIHGYSMRAG-FESFVNVSTALVDMYSKCGSVG--TARLIFDRMTGKT 341

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  MI    Q G P  A+ +F  M+         T+ G + AC++L     G+ +H 
Sbjct: 342 VVSWNSMIDGYVQNGDPGAAMEIFQKMMDEQVEMTNVTVMGALHACADLGDVEQGRFVHK 401

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
              +  L  DV V  SL+ MY+KC     VD + ++F+ +    ++SW A+I GY Q+ G
Sbjct: 402 LLDQLELGSDVSVMNSLISMYSKCK---RVDIAAEIFENLQHKTLVSWNAMILGYAQN-G 457

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--CV 425
           R  EA+  F  M    + P+ FT  SV+ A   L  S + +  + H +     LD    V
Sbjct: 458 RINEAIDYFCKMQLQNIKPDSFTMVSVIPALAEL--SVLPQAKWIHGLVIRTCLDKNVFV 515

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
             +L+ MYA+ G +  ARK F+ + E+++ ++N M+D Y  +   + A EL  +++   +
Sbjct: 516 ATALVDMYAKCGAVHTARKLFDMMDERHVTTWNAMIDGYGTHGLGKAALELFEKMKKEVI 575

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAF 544
             +  TF  +LS  S  G + +G Q    + K  G E     Y A++ +  R   +  A+
Sbjct: 576 KPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRANRLNEAW 635

Query: 545 QVFKEMEDRNVIS 557
              ++M     IS
Sbjct: 636 DFIQKMPIEPAIS 648



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 50/194 (25%), Positives = 95/194 (48%), Gaps = 2/194 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +  +GR+ +AI     M  +   PD  T   ++ +          K +H L+ R+ L
Sbjct: 450 ILGYAQNGRINEAIDYFCKMQLQNIKPDSFTMVSVIPALAELSVLPQAKWIHGLVIRTCL 509

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + N  +  +L+ +Y+KCG ++ A K+F  M ++R + +W++MI  Y   G    A+ +F 
Sbjct: 510 DKNVFVATALVDMYAKCGAVHTARKLFDMM-DERHVTTWNAMIDGYGTHGLGKAALELFE 568

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M +    PNE  F  V+ ACS++  V  G   +G + K    +  +    A++D+  + 
Sbjct: 569 KMKKEVIKPNEVTFLCVLSACSHSGLVEEGFQYFGSMKKDYGLEPAMDHYGAMVDLLGRA 628

Query: 230 SVDLESAYKVFDKM 243
           +  L  A+    KM
Sbjct: 629 N-RLNEAWDFIQKM 641


>gi|115464255|ref|NP_001055727.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|53749358|gb|AAU90217.1| unknow protein [Oryza sativa Japonica Group]
 gi|113579278|dbj|BAF17641.1| Os05g0455900 [Oryza sativa Japonica Group]
 gi|222631826|gb|EEE63958.1| hypothetical protein OsJ_18783 [Oryza sativa Japonica Group]
          Length = 874

 Score =  561 bits (1446), Expect = e-157,   Method: Compositional matrix adjust.
 Identities = 307/865 (35%), Positives = 506/865 (58%), Gaps = 23/865 (2%)

Query: 8   APAKIPPPSSFKPSNPSRQNL------PPSSSPPFIAQPTTSEPL-SNRLIY-HLNDGRV 59
           AP ++P   + + S P+R         PP +  P    P     + +NR+++ +   G V
Sbjct: 22  APEQVPKLLATRAS-PARVEDGVCLRDPPGARYPLDEIPRRDAAVGANRVLFDYARRGMV 80

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NS 118
            + +    +  + G   D  T S +LK+C    +  LG+ +H L  +   +   V    S
Sbjct: 81  LEVLDQFSVARRGGVLVDSATLSCVLKACRSVPDRVLGEQLHCLCVKCGHDRGEVSAGTS 140

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+ +Y KCG + E  ++F+ M  K+++V+W+S+++   +     + + +F  M   G  P
Sbjct: 141 LVDMYMKCGSVCEGIEVFEGM-PKKNVVTWTSLLTGCAHAQMHSEVMALFFRMRAEGIWP 199

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N + F++V+ A ++   + +G  ++   +K G   S V V  +L++M+ K  + +E A  
Sbjct: 200 NPFTFASVLSAVASQGALDLGQRVHAQSVKFG-CRSSVFVCNSLMNMYAKCGL-VEDAKS 257

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VF+ M  ++ V W  ++       C  +A++LF +   +     + T + V+  C+ L+ 
Sbjct: 258 VFNWMETRDMVSWNTLMAGLQLNECELEALQLFHESRATMGKMTQSTYATVIKLCANLKQ 317

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTA 357
               +QLHS  ++ G  L   V  +L D Y+KC   G + D+  +F       NV+SWTA
Sbjct: 318 LALARQLHSCVLKHGFHLTGNVMTALADAYSKC---GELADALNIFSMTTGSRNVVSWTA 374

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           II+G +Q+G     AV LFS M + +V PN FT++++LKA  ++L      Q++   +K 
Sbjct: 375 IISGCIQNGD-IPLAVVLFSRMREDRVMPNEFTYSAMLKASLSIL----PPQIHAQVIKT 429

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                  VG +L++ Y++ G  EDA   F+ + +K++V+++ M+  +A+  + E A  L 
Sbjct: 430 NYQHIPFVGTALLASYSKFGSTEDALSIFKMIEQKDVVAWSAMLSCHAQAGDCEGATYLF 489

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGA-IGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
           +++   G+  + +T +S++   +   A + +G Q HA  IK  +    C+ +AL+SMYSR
Sbjct: 490 NKMAIQGIKPNEFTISSVIDACACPSAGVDQGRQFHAISIKYRYHDAICVSSALVSMYSR 549

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
             N+++A  VF+   DR+++SW SMI+G+A+HG++ +A+E F +M A GI+ +G+T++AV
Sbjct: 550 KGNIDSAQIVFERQTDRDLVSWNSMISGYAQHGYSMKAIETFRQMEASGIQMDGVTFLAV 609

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           +  C+H GL+ EG ++F SM  +H I   MEHYACMVDL  R+G L E +  IR MP  A
Sbjct: 610 IMGCTHNGLVVEGQQYFDSMVRDHKINPTMEHYACMVDLYSRAGKLDETMSLIRDMPFPA 669

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
             +VWRT LGACRVH + ELGK +A+ +L  +P D + ++LLSN+YA+AG W+    +RK
Sbjct: 670 GAMVWRTLLGACRVHKNVELGKFSADKLLSLEPHDSSTYVLLSNIYAAAGKWKERDEVRK 729

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M  R + KEAGCSWI+  NKVH F   + SHP + +IY +L  +  ++K+ GY P+T+F
Sbjct: 730 LMDYRKVKKEAGCSWIQIKNKVHSFIAFDKSHPMSDQIYKKLKVIITRLKQDGYSPNTSF 789

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH++ E+QK   L  HSE++A+AFGLI+T    P+++ KNLRVCGDCH  +K +SM+  
Sbjct: 790 VLHDIAEDQKEAMLVAHSERLALAFGLIATPPGTPLQIVKNLRVCGDCHMVMKMVSMIED 849

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REI++RD +RFHH   G CSC D+W
Sbjct: 850 REIIMRDCSRFHHFNGGACSCGDFW 874


>gi|225435852|ref|XP_002265253.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Vitis vinifera]
          Length = 972

 Score =  560 bits (1444), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 301/845 (35%), Positives = 465/845 (55%), Gaps = 81/845 (9%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++ I    LM  +G  PD   +  + K+C   +N+ +GK V+  +     E NS + 
Sbjct: 169 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 228

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            S++ ++ KCG ++ A + F+ +  K D+  W+ M+S Y ++G+   A+    +M   G 
Sbjct: 229 GSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++  ++A+I                      GY  S                   E A
Sbjct: 288 KPDQVTWNAIIS---------------------GYAQSG----------------QFEEA 310

Query: 237 YKVFDKMT-----EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            K F +M      + N V WT +I    Q G   +A+ +F  M+L G  P+  T++  VS
Sbjct: 311 SKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370

Query: 292 ACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           AC+ L L   G+++H + I+   L  D+ VG SLVD YAKC    SV+ +R+ F  +   
Sbjct: 371 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR---SVEVARRKFGMIKQT 427

Query: 351 NVMSWTAIITGYVQSG----------------------------------GRDKEAVKLF 376
           +++SW A++ GY   G                                  G  K A++ F
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFF 487

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M    + PN  T +  L ACG + +  + ++++ + ++    L   VG++LISMY+  
Sbjct: 488 QRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGC 547

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
             +E A   F  L  +++V +N+++ A A++  S  A +LL E+  + V  +  T  S L
Sbjct: 548 DSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSAL 607

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              S + A+ +G++IH  II+ G ++ + I N+LI MY RC +++ + ++F  M  R+++
Sbjct: 608 PACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 667

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW  MI+ +  HGF   A+ +F +    G+KPN IT+  +LSACSH+GLI EGWK+F+ M
Sbjct: 668 SWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             E+ +   +E YACMVDLL R+G   E LEFI  MP   +  VW + LGACR+H + +L
Sbjct: 728 KTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDL 787

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            ++AA  + E +PQ    ++L++N+Y++AG WE  A IR  MKER + K  GCSWIE   
Sbjct: 788 AEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           K+H F VG+TSHP   +I A+++ L   IKE GY+PDTNFVL +++E++K   L  HSEK
Sbjct: 848 KLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEK 907

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           IA+AFGLIST+   P+R+ KNLRVCGDCH+A K+IS V  R+I++RD+ RFHH  DG CS
Sbjct: 908 IALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCS 967

Query: 857 CNDYW 861
           C DYW
Sbjct: 968 CGDYW 972



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 255/572 (44%), Gaps = 91/572 (15%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + + G  +KA+  +  M   G  PD  T+                               
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTW------------------------------- 294

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRD----IVSWSSMISSYVNRGKQVDAIHMF 168
               N++IS Y++ G   EA+K F  MG  +D    +VSW+++I+     G   +A+ +F
Sbjct: 295 ----NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVF 350

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            +M+  G  PN    ++ + AC+N   +  G  I+G+ +K    DSD+ VG +L+D + K
Sbjct: 351 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 229 --------------GSVDL----------------ESAYKVFDKM----TEKNTVGWTLM 254
                            DL                E A ++  +M     E + + W  +
Sbjct: 411 CRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGL 470

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +T  TQ G  + A+  F  M   G  P+  T+SG ++AC ++     GK++H + +R  +
Sbjct: 471 VTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHI 530

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            L   VG +L+ MY+ C    S++ +  VF  +   +V+ W +II+   QS GR   A+ 
Sbjct: 531 ELSTGVGSALISMYSGCD---SLEVACSVFSELSTRDVVVWNSIISACAQS-GRSVNALD 586

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISM 432
           L  +M    V  N  T  S L AC  L      ++++   ++ G  LD C  + NSLI M
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG--LDTCNFILNSLIDM 644

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y R G ++ +R+ F+ + +++LVS+N M+  Y  +     A  L  +    G+  +  TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITF 704

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEM 550
            +LLS  S  G I +G + + +++K+ +  +  +  Y  ++ + SR        +  ++M
Sbjct: 705 TNLLSACSHSGLIEEGWK-YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM 763

Query: 551 E-DRNVISWTSMITGFAKH------GFAARAL 575
             + N   W S++     H       +AAR L
Sbjct: 764 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 795



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 223/443 (50%), Gaps = 51/443 (11%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVKGSVDLESAYKVF 240
           ++++++ C    N+ +G  ++  L+  G    DVC  +G  L++++ +    +E A ++F
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGV---DVCEFLGSRLLEVYCQTGC-VEDARRMF 147

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           DKM+E+N   WT ++     LG   + I+LF  M+  G  PD F    V  ACSEL+ + 
Sbjct: 148 DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYR 207

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            GK ++ + +  G   + CV  S++DM+ KC   G +D +R+ F+ +   +V  W  +++
Sbjct: 208 VGKDVYDYMLSIGFEGNSCVKGSILDMFIKC---GRMDIARRFFEEIEFKDVFMWNIMVS 264

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY  S G  K+A+K  SDM    V P+  T+                             
Sbjct: 265 GYT-SKGEFKKALKCISDMKLSGVKPDQVTW----------------------------- 294

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFE 475
                 N++IS YA+SG+ E+A K F  +     F+ N+VS+  ++    +N    +A  
Sbjct: 295 ------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALS 348

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMY 534
           +  ++   GV  ++ T AS +S  +++  +  G +IH   IK    +S+  + N+L+  Y
Sbjct: 349 VFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYY 408

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C +VE A + F  ++  +++SW +M+ G+A  G    A+E+  +M   GI+P+ IT+ 
Sbjct: 409 AKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWN 468

Query: 595 AVLSACSHAGLISEGWKHFRSMY 617
            +++  +  G      + F+ M+
Sbjct: 469 GLVTGFTQYGDGKAALEFFQRMH 491



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 144/296 (48%)

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G V   G    A  L S M           +AS+L+ C  L +  +  QV+   V  G  
Sbjct: 62  GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           + + +G+ L+ +Y ++G +EDAR+ F+ + E+N+ S+  +++ Y    + E+  +L + +
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
            + GV    + F  +    S +     G+ ++  ++  GFE N C+  +++ M+ +C  +
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 241

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A + F+E+E ++V  W  M++G+   G   +AL+    M   G+KP+ +T+ A++S  
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           + +G   E  K+F  M         +  +  ++    ++G   EAL   R M L  
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 174/361 (48%), Gaps = 29/361 (8%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DG+     F    M   G  P+  T S  L +C + RN  LGK +H  + R+ +E ++ +
Sbjct: 479 DGKAALEFF--QRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++LIS+YS C  L  A  +F  + + RD+V W+S+IS+    G+ V+A+ +  EM    
Sbjct: 537 GSALISMYSGCDSLEVACSVFSEL-STRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVK-GSVD 232
              N     + + ACS    +  G  I+ F+++CG    D C  +  +LIDM+ + GS+ 
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL---DTCNFILNSLIDMYGRCGSI- 651

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            + + ++FD M +++ V W +MI+     G   DA+ LF      G  P+  T + ++SA
Sbjct: 652 -QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSA 710

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM 347
           CS   L   G +     ++T  A+D       V+ YA C VD     G  +++ +  ++M
Sbjct: 711 CSHSGLIEEGWKYFK-MMKTEYAMD-----PAVEQYA-CMVDLLSRAGQFNETLEFIEKM 763

Query: 348 -LDHNVMSWTAIITG---YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
             + N   W +++     +      +  A  LF   ++ Q + N+   A++  A G   D
Sbjct: 764 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFE--LEPQSSGNYVLMANIYSAAGRWED 821

Query: 404 S 404
           +
Sbjct: 822 A 822



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 11/261 (4%)

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           LL  ++ T        +AS+L     +  +  G Q+HA+++ +G +    + + L+ +Y 
Sbjct: 76  LLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC 135

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +   VE A ++F +M +RNV SWT+++  +   G     +++FY M+ +G++P+   +  
Sbjct: 136 QTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPK 195

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC----MVDLLGRSGSLTEALEFIRS 651
           V  ACS      + ++  + +YD + +    E  +C    ++D+  + G +  A  F   
Sbjct: 196 VFKACSEL----KNYRVGKDVYD-YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEE 250

Query: 652 MPLSADVLVWRTFLGACRVHGDTELG-KHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           +    DV +W   +      G+ +   K  ++M L     D      + + YA +G +E 
Sbjct: 251 IEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309

Query: 711 VANIRKRMKERNLIKEAGCSW 731
            +     M      K    SW
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSW 330


>gi|15226200|ref|NP_180329.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216862|sp|Q9ZUW3.1|PP172_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g27610
 gi|3860271|gb|AAC73039.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330252926|gb|AEC08020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 868

 Score =  559 bits (1441), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 297/809 (36%), Positives = 483/809 (59%), Gaps = 14/809 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DGR Q+A      + + G   D   +S +LK      +   G+ +H    +     +  +
Sbjct: 71  DGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSV 130

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             SL+  Y K  +  +  K+F  M  +R++V+W+++IS Y       + + +F+ M   G
Sbjct: 131 GTSLVDTYMKGSNFKDGRKVFDEM-KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             PN + F+A +   +       G  ++  ++K G  D  + V  +LI++++K   ++  
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG-LDKTIPVSNSLINLYLKCG-NVRK 247

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +FDK   K+ V W  MI+     G   +A+ +F  M L+       + + V+  C+ 
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMS 354
           L+     +QLH   ++ G   D  +  +L+  Y+KCT   ++ D+ ++F  +    NV+S
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT---AMLDALRLFKEIGCVGNVVS 364

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA+I+G++Q+ G++ EAV LFS+M +  V PN FT++ +L A   +  S V  QV    
Sbjct: 365 WTAMISGFLQNDGKE-EAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV---- 419

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           VK        VG +L+  Y + G++E+A K F  + +K++V+++ M+  YA+   +E A 
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479

Query: 475 ELLHEIEDTGVGTSAYTFASLLS-GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
           ++  E+   G+  + +TF+S+L+  A++  ++G+G+Q H   IKS  +S+ C+ +AL++M
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++  N+E+A +VFK   +++++SW SMI+G+A+HG A +AL++F +M    +K +G+T+
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           I V +AC+HAGL+ EG K+F  M  +  I    EH +CMVDL  R+G L +A++ I +MP
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
             A   +WRT L ACRVH  TELG+ AAE I+   P+D AA++LLSN+YA +G W+  A 
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +RK M ERN+ KE G SWIE  NK + F  G+ SHP   +IY +L+ L+ ++K+ GY PD
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 779

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
           T++VL ++++E K   L QHSE++A+AFGLI+T K  P+ + KNLRVCGDCH  IK I+ 
Sbjct: 780 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAK 839

Query: 834 VTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
           +  REIV+RDSNRFHH   DG CSC D+W
Sbjct: 840 IEEREIVVRDSNRFHHFSSDGVCSCGDFW 868



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 147/469 (31%), Positives = 240/469 (51%), Gaps = 30/469 (6%)

Query: 219 GCALIDMFVKGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           G A + ++  G+V    L +A+ +FDK   ++   +  ++   ++ G  ++A RLFL++ 
Sbjct: 26  GVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH 85

Query: 276 LSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
             G   D    S V+   + L  ELF  G+QLH   I+ G   DV VG SLVD Y K + 
Sbjct: 86  RLGMEMDCSIFSSVLKVSATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS- 142

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
             +  D RKVFD M + NV++WT +I+GY ++   D E + LF  M      PN FTFA+
Sbjct: 143 --NFKDGRKVFDEMKERNVVTWTTLISGYARNSMND-EVLTLFMRMQNEGTQPNSFTFAA 199

Query: 394 VLKACGNLLDSNVAE---QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
            L   G L +  V     QV+T  VK G      V NSLI++Y + G +  AR  F+   
Sbjct: 200 AL---GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            K++V++N+M+  YA N    +A  + + +    V  S  +FAS++   +++  +   EQ
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
           +H  ++K GF  +  I  AL+  YS+C  +  A ++FKE+    NV+SWT+MI+GF ++ 
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH---FRSMYDEHGIVQRM 626
               A+++F +M   G++PN  TY  +L+A     +IS    H    ++ Y+    V   
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG-- 431

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
                ++D   + G + EA +    +    D++ W   L      G+TE
Sbjct: 432 ---TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476


>gi|356509847|ref|XP_003523656.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1611

 Score =  559 bits (1440), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/815 (37%), Positives = 479/815 (58%), Gaps = 22/815 (2%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
            G +++A    D M  +    D+  +++++K+ + +   +   L+ S   R+   P+ V L
Sbjct: 809  GLIREARVLFDGMAVR----DVVLWNVMMKAYVDTCLEYEAMLLFSEFHRTGFRPDDVTL 864

Query: 117  NSLISLYSKCG----DLNE----ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
             +L S   KC     +L +    A K+F    +  D++ W+  +S ++ RG+  +A+  F
Sbjct: 865  RTL-SRVVKCKKNILELKQFKAYATKLFMYDDDGSDVIVWNKALSRFLQRGEAWEAVDCF 923

Query: 169  VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            V+M+      +   F  ++   +    + +G  I+G +++ G  D  V VG  LI+M+VK
Sbjct: 924  VDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSG-LDQVVSVGNCLINMYVK 982

Query: 229  -GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
             GSV    A  VF +M E + + W  MI+ CT  G    ++ +F+ ++    LPD+FT++
Sbjct: 983  AGSV--SRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVA 1040

Query: 288  GVVSACSELEL-FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
             V+ ACS LE  +    Q+H+ A++ G+ LD  V  +L+D+Y+K    G ++++  +F  
Sbjct: 1041 SVLRACSSLEGGYYLATQIHACAMKAGVVLDSFVSTALIDVYSK---RGKMEEAEFLFVN 1097

Query: 347  MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
                ++ SW AI+ GY+ SG   K A++L+  M +     +  T  +  KA G L+    
Sbjct: 1098 QDGFDLASWNAIMHGYIVSGDFPK-ALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQ 1156

Query: 407  AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             +Q++   VKRG  LD  V + ++ MY + G ME AR+ F  +   + V++ TM+    +
Sbjct: 1157 GKQIHAVVVKRGFNLDLFVTSGVLDMYLKCGEMESARRVFSEIPSPDDVAWTTMISGCVE 1216

Query: 467  NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
            N   E A    H++  + V    YTFA+L+   S + A+ +G QIHA I+K     +  +
Sbjct: 1217 NGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDPFV 1276

Query: 527  YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
              +L+ MY++C N+E A  +FK    R + SW +MI G A+HG A  AL+ F  M + G+
Sbjct: 1277 MTSLVDMYAKCGNIEDARGLFKRTNTRRIASWNAMIVGLAQHGNAKEALQFFKYMKSRGV 1336

Query: 587  KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
             P+ +T+I VLSACSH+GL+SE +++F SM   +GI   +EHY+C+VD L R+G + EA 
Sbjct: 1337 MPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAGRIEEAE 1396

Query: 647  EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            + I SMP  A   ++RT L ACRV  D E GK  AE +L  +P D AA++LLSN+YA+A 
Sbjct: 1397 KVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVYAAAN 1456

Query: 707  HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
             WE VA+ R  M++ N+ K+ G SW++  NKVH F  G+ SH +T  IY +++ +  +I+
Sbjct: 1457 QWENVASARNMMRKVNVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEYIMKRIR 1516

Query: 767  EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
            E GY+PDT+F L ++EEE K   L+ HSEK+A+A+GL+ T  S  +RV KNLRVCGDCH+
Sbjct: 1517 EEGYVPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRVCGDCHS 1576

Query: 827  AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            AIKYIS V  REIVLRD+NRFHH ++G CSC DYW
Sbjct: 1577 AIKYISKVFKREIVLRDANRFHHFRNGICSCGDYW 1611



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 159/643 (24%), Positives = 293/643 (45%), Gaps = 49/643 (7%)

Query: 42   TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGN--HPDLDTYSLLLKSCIRSRNFHLGKL 99
            +  P    +I  L   R++ A  T + +T + +  H     +S+L +  I + +  LGK 
Sbjct: 619  SDNPSPTAMIMALMHLRLRAATSTANPLTPRAHLIHSLPQCFSIL-RQAIAASDLSLGKR 677

Query: 100  VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNR 158
             H+ +  S   P+  + N+LI++Y+KCG L+ A K+F +  +  RD+V+W++++S+    
Sbjct: 678  AHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDTNRDLVTWNAILSALAAH 737

Query: 159  G-KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
              K  D  H+F  +         +  + V + C  + + +    ++G+ +K G    DV 
Sbjct: 738  ADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASESLHGYAVKIG-LQWDVF 796

Query: 218  VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
            V  AL++++ K  + +  A  +FD M  ++ V W +M+          +A+ LF +   +
Sbjct: 797  VAGALVNIYAKFGL-IREARVLFDGMAVRDVVLWNVMMKAYVDTCLEYEAMLLFSEFHRT 855

Query: 278  GFLPDRFTLSGV--VSACSE--LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
            GF PD  TL  +  V  C +  LEL    KQ  ++A +  +  D                
Sbjct: 856  GFRPDDVTLRTLSRVVKCKKNILEL----KQFKAYATKLFMYDD---------------- 895

Query: 334  DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            DGS              +V+ W   ++ ++Q  G   EAV  F DMI  +VA +  TF  
Sbjct: 896  DGS--------------DVIVWNKALSRFLQR-GEAWEAVDCFVDMINSRVACDGLTFVV 940

Query: 394  VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            +L     L    + +Q++   ++ G      VGN LI+MY ++G +  AR  F  + E +
Sbjct: 941  MLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVD 1000

Query: 454  LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI-GAIGKGEQIH 512
            L+S+NTM+     +   E +  +   +    +    +T AS+L   SS+ G      QIH
Sbjct: 1001 LISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVASVLRACSSLEGGYYLATQIH 1060

Query: 513  ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
            A  +K+G   +  +  ALI +YS+   +E A  +F   +  ++ SW +++ G+   G   
Sbjct: 1061 ACAMKAGVVLDSFVSTALIDVYSKRGKMEEAEFLFVNQDGFDLASWNAIMHGYIVSGDFP 1120

Query: 573  RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            +AL ++  M   G + + IT +    A      + +G K   ++  + G    +   + +
Sbjct: 1121 KALRLYILMQESGERSDQITLVNAAKAAGGLVGLKQG-KQIHAVVVKRGFNLDLFVTSGV 1179

Query: 633  VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            +D+  + G +  A      +P S D + W T +  C  +G  E
Sbjct: 1180 LDMYLKCGEMESARRVFSEIP-SPDDVAWTTMISGCVENGQEE 1221



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 136/534 (25%), Positives = 240/534 (44%), Gaps = 52/534 (9%)

Query: 182  CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
            CFS ++R      ++++G   +  +L  G+   D  V   LI M+ K GS  L SA K+F
Sbjct: 659  CFS-ILRQAIAASDLSLGKRAHARILTSGHH-PDRFVTNNLITMYAKCGS--LSSARKLF 714

Query: 241  DKM--TEKNTVGWTLMITR-CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
            D    T ++ V W  +++          D   LF  +  S     R TL+ V   C    
Sbjct: 715  DTTPDTNRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSA 774

Query: 298  LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              ++ + LH +A++ GL  DV V  +LV++YAK    G + ++R +FD M   +V+ W  
Sbjct: 775  SPSASESLHGYAVKIGLQWDVFVAGALVNIYAKF---GLIREARVLFDGMAVRDVVLWNV 831

Query: 358  IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF---TFASVLKACGNLLDSNVAEQVYTHA 414
            ++  YV +   + EA+ LFS+  +    P+     T + V+K   N+L+    +Q   +A
Sbjct: 832  MMKAYVDT-CLEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILE---LKQFKAYA 887

Query: 415  VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
             K             + MY   G               +++ +N  +  + +   + +A 
Sbjct: 888  TK-------------LFMYDDDG--------------SDVIVWNKALSRFLQRGEAWEAV 920

Query: 475  ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            +   ++ ++ V     TF  +L+  + +  +  G+QIH  +++SG +    + N LI+MY
Sbjct: 921  DCFVDMINSRVACDGLTFVVMLTVVAGLNCLELGKQIHGIVMRSGLDQVVSVGNCLINMY 980

Query: 535  SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
             +  +V  A  VF +M + ++ISW +MI+G    G    ++ +F  +L D + P+  T  
Sbjct: 981  VKAGSVSRARSVFGQMNEVDLISWNTMISGCTLSGLEECSVGMFVHLLRDSLLPDQFTVA 1040

Query: 595  AVLSACS--HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            +VL ACS    G       H  +M  + G+V        ++D+  + G + EA EF+   
Sbjct: 1041 SVLRACSSLEGGYYLATQIHACAM--KAGVVLDSFVSTALIDVYSKRGKMEEA-EFLFVN 1097

Query: 653  PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
                D+  W   +    V GD    K     IL Q+  + +  I L N   +AG
Sbjct: 1098 QDGFDLASWNAIMHGYIVSGD--FPKALRLYILMQESGERSDQITLVNAAKAAG 1149



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 156/356 (43%), Gaps = 38/356 (10%)

Query: 393  SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
            S+L+      D ++ ++ +   +  G   D  V N+LI+MYA+ G +  ARK F++  + 
Sbjct: 661  SILRQAIAASDLSLGKRAHARILTSGHHPDRFVTNNLITMYAKCGSLSSARKLFDTTPDT 720

Query: 453  N--LVSYNTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            N  LV++N ++ A A + + S   F L   +  + V T+ +T A +        +    E
Sbjct: 721  NRDLVTWNAILSALAAHADKSHDGFHLFRLLRRSVVSTTRHTLAPVFKMCLLSASPSASE 780

Query: 510  QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
             +H   +K G + +  +  AL+++Y++   +  A  +F  M  R+V+ W  M+  +    
Sbjct: 781  SLHGYAVKIGLQWDVFVAGALVNIYAKFGLIREARVLFDGMAVRDVVLWNVMMKAYVDTC 840

Query: 570  FAARALEIFYKMLADGIKPNGITY--IAVLSACSHAGLISEGWKHFRS---MYDEHG--- 621
                A+ +F +    G +P+ +T   ++ +  C    L  + +K + +   MYD+ G   
Sbjct: 841  LEYEAMLLFSEFHRTGFRPDDVTLRTLSRVVKCKKNILELKQFKAYATKLFMYDDDGSDV 900

Query: 622  ---------IVQRMEHYA---CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
                      +QR E +    C VD++  S    + L F+  + + A +         C 
Sbjct: 901  IVWNKALSRFLQRGEAWEAVDCFVDMIN-SRVACDGLTFVVMLTVVAGL--------NC- 950

Query: 670  VHGDTELGKHAAEMILEQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
                 ELGK    +++     Q  +    L N+Y  AG      ++  +M E +LI
Sbjct: 951  ----LELGKQIHGIVMRSGLDQVVSVGNCLINMYVKAGSVSRARSVFGQMNEVDLI 1002



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 58/255 (22%), Positives = 115/255 (45%), Gaps = 5/255 (1%)

Query: 54   LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
            + +G+ + A+FT   M      PD  T++ L+K+C        G+ +H+ + +     + 
Sbjct: 1215 VENGQEEHALFTYHQMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANIVKLNCAFDP 1274

Query: 114  VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
             ++ SL+ +Y+KCG++ +A  +FK   N R I SW++MI      G   +A+  F  M  
Sbjct: 1275 FVMTSLVDMYAKCGNIEDARGLFKRT-NTRRIASWNAMIVGLAQHGNAKEALQFFKYMKS 1333

Query: 174  LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
             G  P+   F  V+ ACS++  V+  +  +  + K    + ++     L+D   +    +
Sbjct: 1334 RGVMPDRVTFIGVLSACSHSGLVSEAYENFYSMQKNYGIEPEIEHYSCLVDALSRAG-RI 1392

Query: 234  ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR---FTLSGVV 290
            E A KV   M  + +      +    ++   R+  +   + +L+    D      LS V 
Sbjct: 1393 EEAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSNVY 1452

Query: 291  SACSELELFTSGKQL 305
            +A ++ E   S + +
Sbjct: 1453 AAANQWENVASARNM 1467


>gi|224120094|ref|XP_002331135.1| predicted protein [Populus trichocarpa]
 gi|222872863|gb|EEF09994.1| predicted protein [Populus trichocarpa]
          Length = 799

 Score =  558 bits (1438), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/797 (36%), Positives = 469/797 (58%), Gaps = 19/797 (2%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTR-------SKLEPNSVILNSLISLYSKCGDLN 130
           L+  ++LL+SCI+S++   GKL+H  L +       + L    V    L+ LY  C +L 
Sbjct: 9   LEYCTVLLESCIQSKSLFRGKLIHQHLLKCLHRTHETNLTNFDVPFEKLVDLYIACSELK 68

Query: 131 EANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
            A  +F  M ++ +++V W+ +I +Y   G   +AI ++ +ML  G  PN + F  V++A
Sbjct: 69  IARHVFDKMPHRPKNVVLWNLLIRAYAWNGPYEEAIDLYYKMLGYGITPNRFTFPFVLKA 128

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
           CS  +  + G  I+  + +    +S+V V  AL+D + K    L+ A +VFDKM +++ V
Sbjct: 129 CSALKEASEGREIHCDIKRL-RLESNVYVSTALVDFYAKCGC-LDDAKEVFDKMHKRDVV 186

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  MI+  +      D +   L  + +   P+  T+ GV+ A +++     GK++H + 
Sbjct: 187 AWNSMISGFSLHEGSYDEVARLLVQMQNDVSPNSSTIVGVLPAVAQVNSLRHGKEIHGFC 246

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGR 368
           +R G   DV VG  ++D+Y KC     +D +R++FD M +  N ++W+A++  YV     
Sbjct: 247 VRRGFVGDVVVGTGILDVYGKCQ---CIDYARRIFDMMGIVKNEVTWSAMVGAYVVCDFM 303

Query: 369 DKEAVKLFSDMIQGQ---VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
            +EA++LF  ++  +   +  +  T A+V++ C NL D +    ++ +A+K G  LD  V
Sbjct: 304 -REALELFCQLLMLKDDVIVLSAVTLATVIRVCANLTDLSTGTCLHCYAIKSGFVLDLMV 362

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
           GN+L+SMYA+ G +  A + F  +  ++ VS+  ++  Y +N NSE+   +  E++ +G+
Sbjct: 363 GNTLLSMYAKCGIINGAMRFFNEMDLRDAVSFTAIISGYVQNGNSEEGLRMFLEMQLSGI 422

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
                T AS+L   + +  +  G   H   I  GF ++  I NALI MY++C  ++ A +
Sbjct: 423 NPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTADTMICNALIDMYAKCGKIDTARK 482

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           VF  M  R ++SW +MI  +  HG    AL +F  M ++G+KP+ +T+I ++SACSH+GL
Sbjct: 483 VFDRMHKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQSEGLKPDDVTFICLISACSHSGL 542

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           ++EG   F +M  + GI+ RMEHYACMVDLL R+G   E   FI  MPL  DV VW   L
Sbjct: 543 VAEGKYWFNAMTQDFGIIPRMEHYACMVDLLSRAGLFKEVHSFIEKMPLEPDVRVWGALL 602

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
            ACRV+ + ELG+  ++ I +  P+     +LLSN+Y++ G W+  A +R   KE+   K
Sbjct: 603 SACRVYKNVELGEGVSKKIQKLGPESTGNFVLLSNMYSAVGRWDDAAQVRFTQKEQGFEK 662

Query: 726 EAGCSWIEADNKVHKF-HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
             GCSWIE    VH F   G  SHP+  +I  +LD+L +++K  GY  ++++V  ++EEE
Sbjct: 663 SPGCSWIEISGVVHTFLGGGYRSHPQLTQISNKLDELLVEMKRLGYQAESSYVFQDVEEE 722

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           +K + L  HSEK+A+AFG++S S  K I V KNLRVCGDCHTAIK+IS+VT R+I +RD+
Sbjct: 723 EKERVLLYHSEKLAIAFGILSLSPDKHIIVTKNLRVCGDCHTAIKFISLVTKRDITVRDA 782

Query: 845 NRFHHIKDGKCSCNDYW 861
           +RFHH KDG C+C D+W
Sbjct: 783 SRFHHFKDGICNCGDFW 799



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 141/458 (30%), Positives = 247/458 (53%), Gaps = 11/458 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++AI     M   G  P+  T+  +LK+C   +    G+ +H  + R +LE N  +
Sbjct: 97  NGPYEEAIDLYYKMLGYGITPNRFTFPFVLKACSALKEASEGREIHCDIKRLRLESNVYV 156

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +L+  Y+KCG L++A ++F  M +KRD+V+W+SMIS +       D +   +  ++  
Sbjct: 157 STALVDFYAKCGCLDDAKEVFDKM-HKRDVVAWNSMISGFSLHEGSYDEVARLLVQMQND 215

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             PN      V+ A +   ++  G  I+GF ++ G F  DV VG  ++D++ K    ++ 
Sbjct: 216 VSPNSSTIVGVLPAVAQVNSLRHGKEIHGFCVRRG-FVGDVVVGTGILDVYGKCQC-IDY 273

Query: 236 AYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL---SGFLPDRFTLSGVVS 291
           A ++FD M   KN V W+ M+         R+A+ LF  +++      +    TL+ V+ 
Sbjct: 274 ARRIFDMMGIVKNEVTWSAMVGAYVVCDFMREALELFCQLLMLKDDVIVLSAVTLATVIR 333

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            C+ L   ++G  LH +AI++G  LD+ VG +L+ MYAKC   G ++ + + F+ M   +
Sbjct: 334 VCANLTDLSTGTCLHCYAIKSGFVLDLMVGNTLLSMYAKC---GIINGAMRFFNEMDLRD 390

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            +S+TAII+GYVQ+G  + E +++F +M    + P   T ASVL AC +L   +     +
Sbjct: 391 AVSFTAIISGYVQNGNSE-EGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSH 449

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            +A+  G   D  + N+LI MYA+ G+++ ARK F+ + ++ +VS+NTM+ AY  +    
Sbjct: 450 CYAIICGFTADTMICNALIDMYAKCGKIDTARKVFDRMHKRGIVSWNTMIIAYGIHGIGL 509

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
           +A  L   ++  G+     TF  L+S  S  G + +G+
Sbjct: 510 EALLLFDNMQSEGLKPDDVTFICLISACSHSGLVAEGK 547



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 78/147 (53%), Gaps = 1/147 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G  ++ +     M   G +P+  T + +L +C      H G   H          +
Sbjct: 401 YVQNGNSEEGLRMFLEMQLSGINPEKATLASVLPACAHLAGLHYGSCSHCYAIICGFTAD 460

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           ++I N+LI +Y+KCG ++ A K+F  M +KR IVSW++MI +Y   G  ++A+ +F  M 
Sbjct: 461 TMICNALIDMYAKCGKIDTARKVFDRM-HKRGIVSWNTMIIAYGIHGIGLEALLLFDNMQ 519

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG 199
             G  P++  F  +I ACS++  VA G
Sbjct: 520 SEGLKPDDVTFICLISACSHSGLVAEG 546


>gi|357497455|ref|XP_003619016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494031|gb|AES75234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 999

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 290/782 (37%), Positives = 468/782 (59%), Gaps = 41/782 (5%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           ++L +C +   F  GK +H L+ +      + + N+L++LYS+ G+L+ A +IF  M ++
Sbjct: 256 IVLSACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCM-SQ 314

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD VS++S+IS    +G    A+ +F +M      P+    ++++ AC++   +  G   
Sbjct: 315 RDRVSYNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQF 374

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC-TQL 261
           + + +K G   SD+ V  +L+D++VK S D+++A++ F                 C  QL
Sbjct: 375 HSYAIKAG-MTSDIVVEGSLLDLYVKCS-DIKTAHEFF----------------LCYGQL 416

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
                + ++F  M + G +P++FT   ++  C+ L     G+Q+H+  ++TG   +V V 
Sbjct: 417 DNLNKSFQIFTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVS 476

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK--EAVKLFSDM 379
             L+DMYAK    G +D + K+F R+ +++V+SWTA+I GY Q    DK  EA+ LF +M
Sbjct: 477 SVLIDMYAK---HGKLDHALKIFRRLKENDVVSWTAMIAGYTQ---HDKFTEALNLFKEM 530

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               +  ++  FAS + AC  +   +   Q++  +   G + D  +GN+L+S+YAR G++
Sbjct: 531 QDQGIKSDNIGFASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARCGKV 590

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
            +A  AF+ ++ K+ VS+N++V  +A++   E+A  +  ++   G+  +++TF S +S A
Sbjct: 591 REAYAAFDQIYAKDNVSWNSLVSGFAQSGYFEEALNIFAQMNKAGLEINSFTFGSAVSAA 650

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           ++I  +  G+QIH  I K+G++S   + NALI++Y++C  ++              ISW 
Sbjct: 651 ANIANVRIGKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWN 697

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           SMITG+++HG    AL++F  M    + PN +T++ VLSACSH GL+ EG  +FRSM + 
Sbjct: 698 SMITGYSQHGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEGISYFRSMSEA 757

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           H +V + EHYAC+VDLLGRSG L+ A  F+  MP+  D +VWRT L AC VH + ++G+ 
Sbjct: 758 HNLVPKPEHYACVVDLLGRSGLLSRAKRFVEEMPIQPDAMVWRTLLSACNVHKNIDIGEF 817

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AA  +LE +P+D A ++L+SN+YA +G W+     R+ MK+R + KE G SW+E DN VH
Sbjct: 818 AASHLLELEPKDSATYVLVSNMYAVSGKWDCRDRTRQMMKDRGVKKEPGRSWVEVDNSVH 877

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
            F  G+ +HP+   IY  L  L  +  E GY+P  N +L + E  QK      HSE++A+
Sbjct: 878 AFFAGDQNHPRADMIYEYLRGLDFRAAENGYVPRCNSLLSDAEIRQKDPTEIIHSERLAI 937

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGL+S + S P+ VFKNLRVC DCH  IK++S +T R I++RDS RFHH K G CSC D
Sbjct: 938 AFGLLSLTSSTPLYVFKNLRVCEDCHNWIKHVSKITDRVIIVRDSYRFHHFKVGSCSCKD 997

Query: 860 YW 861
           YW
Sbjct: 998 YW 999



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 286/581 (49%), Gaps = 57/581 (9%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           L LM Q G   +  T+  LL+ C+ SR+F+ G                     LI  Y  
Sbjct: 69  LHLMEQHGVRANSQTFLWLLEGCLNSRSFYDGL-------------------KLIDFYLA 109

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
            GDLN A  +F  M   R +  W+ + ++++          +F  ML      +E  F+ 
Sbjct: 110 FGDLNCAVNVFDEMP-IRSLSCWNRIFNTFIAERLMGRVPGLFRRMLTKNVEFDERIFAV 168

Query: 186 VIRACS-NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           V+R CS N  +      I+   +  G F+S   +   LID++ K    L SA KVF+ + 
Sbjct: 169 VLRGCSGNAVSFRFVEQIHAKTITSG-FESSTFICNPLIDLYFKNGF-LSSAKKVFENLK 226

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            +++V W  MI+  +Q G   +A+ LF  ++L              SAC+++E F  GKQ
Sbjct: 227 ARDSVSWVAMISGLSQNGYEEEAMLLFCQIVL--------------SACTKVEFFEFGKQ 272

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH   ++ G + +  V  +LV +Y++    G++  + ++F  M   + +S+ ++I+G  Q
Sbjct: 273 LHGLVLKQGFSSETYVCNALVTLYSR---SGNLSSAEQIFHCMSQRDRVSYNSLISGLAQ 329

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
            G  ++ A+ LF  M      P+  T AS+L AC ++      +Q +++A+K G   D  
Sbjct: 330 QGYINR-ALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIKAGMTSDIV 388

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V  SL+ +Y +   ++ A + F        + Y  +      NLN  K+F++  +++  G
Sbjct: 389 VEGSLLDLYVKCSDIKTAHEFF--------LCYGQL-----DNLN--KSFQIFTQMQIEG 433

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +  + +T+ S+L   +++GA   GEQIH +++K+GF+ N  + + LI MY++   ++ A 
Sbjct: 434 IVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHAL 493

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           ++F+ +++ +V+SWT+MI G+ +H     AL +F +M   GIK + I + + +SAC+   
Sbjct: 494 KIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGFASAISACAGIQ 553

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
            + +G +   +     G    +     +V L  R G + EA
Sbjct: 554 ALDQG-RQIHAQSCLSGYSDDLSIGNALVSLYARCGKVREA 593



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 231/462 (50%), Gaps = 36/462 (7%)

Query: 48  NRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N LI  L   G + +A+     M      PD  T + LL +C        GK  HS   +
Sbjct: 321 NSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNGKQFHSYAIK 380

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           + +  + V+  SL+ LY KC D+  A++ F   G   ++           N+  Q+    
Sbjct: 381 AGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNL-----------NKSFQI---- 425

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
            F +M   G  PN++ + ++++ C+      +G  I+  +LK G F  +V V   LIDM+
Sbjct: 426 -FTQMQIEGIVPNQFTYPSILKTCTTLGATDLGEQIHTQVLKTG-FQFNVYVSSVLIDMY 483

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K    L+ A K+F ++ E + V WT MI   TQ     +A+ LF +M   G   D    
Sbjct: 484 AKHG-KLDHALKIFRRLKENDVVSWTAMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           +  +SAC+ ++    G+Q+H+ +  +G + D+ +G +LV +YA+C   G V ++   FD+
Sbjct: 543 ASAISACAGIQALDQGRQIHAQSCLSGYSDDLSIGNALVSLYARC---GKVREAYAAFDQ 599

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           +   + +SW ++++G+ QSG  + EA+ +F+ M +  +  N FTF S + A  N+ +  +
Sbjct: 600 IYAKDNVSWNSLVSGFAQSGYFE-EALNIFAQMNKAGLEINSFTFGSAVSAAANIANVRI 658

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            +Q++    K G   +  V N+LI++YA+ G ++D             +S+N+M+  Y++
Sbjct: 659 GKQIHGMIRKTGYDSETEVSNALITLYAKCGTIDD-------------ISWNSMITGYSQ 705

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           +    +A +L  +++   V  +  TF  +LS  S +G + +G
Sbjct: 706 HGCGFEALKLFEDMKQLDVLPNHVTFVGVLSACSHVGLVDEG 747



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 124/476 (26%), Positives = 215/476 (45%), Gaps = 59/476 (12%)

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--GRDKEAVKLFSD 378
           G  L+D Y      G ++ +  VFD M   ++  W  I   ++     GR      LF  
Sbjct: 100 GLKLIDFYLAF---GDLNCAVNVFDEMPIRSLSCWNRIFNTFIAERLMGR---VPGLFRR 153

Query: 379 MIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           M+   V  +   FA VL+ C GN +     EQ++   +  G      + N LI +Y ++G
Sbjct: 154 MLTKNVEFDERIFAVVLRGCSGNAVSFRFVEQIHAKTITSGFESSTFICNPLIDLYFKNG 213

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            +  A+K FE+L  ++ VS+  M+   ++N   E+A  L  +I              +LS
Sbjct: 214 FLSSAKKVFENLKARDSVSWVAMISGLSQNGYEEEAMLLFCQI--------------VLS 259

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + +     G+Q+H  ++K GF S   + NAL+++YSR  N+ +A Q+F  M  R+ +S
Sbjct: 260 ACTKVEFFEFGKQLHGLVLKQGFSSETYVCNALVTLYSRSGNLSSAEQIFHCMSQRDRVS 319

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           + S+I+G A+ G+  RAL +F KM  D  KP+ +T  ++LSAC+  G +  G K F S  
Sbjct: 320 YNSLISGLAQQGYINRALALFKKMNLDCQKPDCVTVASLLSACASVGALPNG-KQFHSYA 378

Query: 618 DEHGIVQRMEHYACMVDL----------------LGRSGSLTEALEFIRSMPLSADV--- 658
            + G+   +     ++DL                 G+  +L ++ +    M +   V   
Sbjct: 379 IKAGMTSDIVVEGSLLDLYVKCSDIKTAHEFFLCYGQLDNLNKSFQIFTQMQIEGIVPNQ 438

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYASAGHWEYVANIRKR 717
             + + L  C   G T+LG+     +L+   Q +     +L ++YA  G  ++   I +R
Sbjct: 439 FTYPSILKTCTTLGATDLGEQIHTQVLKTGFQFNVYVSSVLIDMYAKHGKLDHALKIFRR 498

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPK---TLEIYAELDQLALKIKEFGY 770
           +KE +++     SW            G T H K    L ++ E+    +K    G+
Sbjct: 499 LKENDVV-----SWT-------AMIAGYTQHDKFTEALNLFKEMQDQGIKSDNIGF 542


>gi|302816499|ref|XP_002989928.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
 gi|300142239|gb|EFJ08941.1| hypothetical protein SELMODRAFT_130658 [Selaginella moellendorffii]
          Length = 818

 Score =  558 bits (1437), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 305/827 (36%), Positives = 483/827 (58%), Gaps = 52/827 (6%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
            PD  T+  +L SC    +   G+ +H  +  S+ E ++++ N+LIS+Y KC  L +A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVAEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 135 IFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           +F+SM   +R++VSW++MI++Y   G   +A+ ++  M   G   +   F +V+ ACS+ 
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWT 252
             +A G  I+  +   G  DS   +  AL+ M+ + GSV    A ++F  +  ++   W 
Sbjct: 123 --LAQGREIHNRVFYSG-LDSFQSLANALVTMYARFGSVG--DAKRMFQSLQTRDETSWN 177

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I   +Q G    A+R+F +M      P+  T   V+S  S  E+   G+++H+  +  
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCD-MKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN 236

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G   D+ V  +L++MY KC   GS  ++R+VFD+M   +++SW  +I  YVQ+G    EA
Sbjct: 237 GFDSDLVVATALINMYGKC---GSSHEAREVFDKMKKRDMVSWNVMIGCYVQNGDF-HEA 292

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           ++L+  +          TF S+L AC ++        V++H ++RG   +  V  +L++M
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN------LNSEKAFELLHEIEDT--- 483
           YA+ G +E+ARK F ++  ++ V+++T++ AYA N        + K F+ L    DT   
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGS-RDTICW 411

Query: 484 ---------------------------GVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
                                      G+   A TF ++L   +S+G + + + +HA+I 
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQIS 471

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           +S  ESN  + N LI+MY+RC ++E A ++F   +++ V+SWT+M+  F+++G  A AL+
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALD 531

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M  +G+KP+ +TY ++L  C+H G + +GW++F  M + HG+    +H+A MVDLL
Sbjct: 532 LFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLL 591

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GRSG L +A E + SMP   D + W TFL ACR+HG  ELG+ AAE + E DP   A +I
Sbjct: 592 GRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYI 651

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
            +SN+YA+ G WE VA++RK+M+ER L K  G S+IE D K+H+F  G   HP+T EI  
Sbjct: 652 AMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICE 711

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS-KPIRVF 815
           EL +L   ++  GY+PDT  VLH++ E +K   L  HSEK+A+AFGL+S+  S +PIRV 
Sbjct: 712 ELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVV 771

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
           KNLRVC DCHTA K+I+ + GR+I+LRD NRFH    DGKCSC DYW
Sbjct: 772 KNLRVCSDCHTATKFIARIAGRDIILRDCNRFHRFSSDGKCSCGDYW 818



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 55/352 (15%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G   +A+     +  +G      T+  +L +C   +    G+LVHS +    L+  
Sbjct: 283 YVQNGDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSE 342

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------ 142
             +  +L+++Y+KCG L EA K+F +M N+                              
Sbjct: 343 VAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDR 402

Query: 143 ---RDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAI 198
              RD + W++MI++YV  G  V A+ +F EM    G  P+   F AV+ AC++   ++ 
Sbjct: 403 LGSRDTICWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSE 462

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
              ++  + +    +S+V V   LI+M+ + GS  LE A ++F    EK  V WT M+  
Sbjct: 463 VKALHAQISE-SELESNVVVTNTLINMYARCGS--LEEAERLFAAAKEKTVVSWTAMVAA 519

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE-------LELFTSGKQLHSWAI 310
            +Q G   +A+ LF +M L G  PD  T + ++  C+           FT   +LH    
Sbjct: 520 FSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELH---- 575

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG 361
             GLA       ++VD+  +    G + D++++ + M  + + ++W   +T 
Sbjct: 576 --GLAPTADHFAAMVDLLGR---SGRLFDAKELLESMPFEPDPVAWMTFLTA 622



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++    G  PD  T+  +L++C         K +H+ ++ S+LE N V+ N+LI++Y++C
Sbjct: 433 EMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARC 492

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L EA ++F +   ++ +VSW++M++++   G+  +A+ +F EM   G  P++  ++++
Sbjct: 493 GSLEEAERLFAA-AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-E 245
           +  C++  ++  G   +  + +            A++D+  + S  L  A ++ + M  E
Sbjct: 552 LFVCTHGGSLEQGWRYFTDMAELHGLAPTADHFAAMVDLLGR-SGRLFDAKELLESMPFE 610

Query: 246 KNTVGWTLMITRC 258
            + V W   +T C
Sbjct: 611 PDPVAWMTFLTAC 623


>gi|302773622|ref|XP_002970228.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
 gi|300161744|gb|EFJ28358.1| hypothetical protein SELMODRAFT_93321 [Selaginella moellendorffii]
          Length = 936

 Score =  557 bits (1436), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 293/811 (36%), Positives = 475/811 (58%), Gaps = 7/811 (0%)

Query: 51  IYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
           +Y L     + A+     M  +G   ++ T+  +L S +       GK +HS +  S+  
Sbjct: 133 VYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHS 192

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            +  +  +L++ Y+KCG L +A K+F  M   R + +W+SMIS+Y    +  +A  +F  
Sbjct: 193 LDVFVNTALVNTYTKCGSLTDARKVFDGMPC-RSVGTWNSMISAYSISERSGEAFFIFQR 251

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M + G   +   F +++ AC N E +  G  +   + +   F+ D+ VG ALI M+ +  
Sbjct: 252 MQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETS-FELDLFVGTALITMYARCR 310

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
              E A +VF +M + N + W+ +IT     G   +A+R F  M   G LP+R T   ++
Sbjct: 311 SP-EDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLL 369

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +  +         ++H      GL     +  +LV++Y +C    S DD+R VFD++   
Sbjct: 370 NGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCE---SPDDARTVFDQLELP 426

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           N++SW ++I  YVQ   R  +A++LF  M Q  + P+   F ++L AC         + V
Sbjct: 427 NLISWNSMIGIYVQCE-RHDDALQLFRTMQQQGIQPDRVNFMTILGACTIGSHGRTRKLV 485

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +    + G      V  SL++MYA++G ++ A    + + E+ + ++N +++ YA +  S
Sbjct: 486 HQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRS 545

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
            +A E   +++   +     TF S+L+  +S  ++ +G+ IH+  ++ G +S+  + NAL
Sbjct: 546 REALEAYQKLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNAL 605

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
            +MYS+C ++E A ++F  M  R+ +SW  M+  +A+HG +   L++  KM  +G+K NG
Sbjct: 606 TNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLNG 665

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           IT+++VLS+CSHAGLI+EG ++F S+  + GI  + EHY C+VDLLGR+G L EA ++I 
Sbjct: 666 ITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYIS 725

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
            MPL   ++ W + LGACRV  D + GK AA  +LE DP + +A ++LSN+Y+  G W+ 
Sbjct: 726 KMPLEPGIVTWASLLGACRVQKDLDRGKLAAGKLLELDPGNSSASVVLSNIYSERGDWKN 785

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
            A +R+ M  R + K  G S I+  NKVH+F V +TSHP+  EIY ++++L   ++E GY
Sbjct: 786 AAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAMREAGY 845

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +PDT  VLH+++EEQK   L  HSEK+A+AFGLIST ++  + +FKNLRVC DCHTA K+
Sbjct: 846 VPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPETSSLHIFKNLRVCEDCHTATKF 905

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS +TGREIV+RD++RFHH +DG CSC DYW
Sbjct: 906 ISKITGREIVVRDNHRFHHFRDGSCSCKDYW 936



 Score =  261 bits (666), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 182/621 (29%), Positives = 314/621 (50%), Gaps = 18/621 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q+A+     M  +G  P+  T   +L SC   R    G LVH+L        N+++  +L
Sbjct: 40  QEALALFHAMLLEGVAPNAITLVAVLNSCGSFRELRDGILVHALSLERGFFQNTLVATAL 99

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD-AIHMFVEMLELGFCP 178
           +++Y KCG L +A  +F+ M  K ++V+W++M+  Y  +G     A+ +F  ML  G   
Sbjct: 100 LNMYGKCGTLLDAQSVFEEMAEK-NVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKA 158

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           N   F  V+ +  + + +  G  I+  + +  +   DV V  AL++ + K GS  L  A 
Sbjct: 159 NVITFLNVLNSVVDPDALRKGKFIHSCVRESEH-SLDVFVNTALVNTYTKCGS--LTDAR 215

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           KVFD M  ++   W  MI+  +      +A  +F  M   G   DR T   ++ AC   E
Sbjct: 216 KVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPE 275

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               GK +      T   LD+ VG +L+ MYA+C    S +D+ +VF RM   N+++W+A
Sbjct: 276 TLQHGKHVRESISETSFELDLFVGTALITMYARCR---SPEDAAQVFGRMKQTNLITWSA 332

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           IIT +    G   EA++ F  M Q  + PN  TF S+L   G    S + E    H +  
Sbjct: 333 IITAFADH-GHCGEALRYFRMMQQEGILPNRVTFISLLN--GFTTPSGLEELSRIHLLIT 389

Query: 418 GRALDD--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
              LDD   + N+L+++Y R    +DAR  F+ L   NL+S+N+M+  Y +    + A +
Sbjct: 390 EHGLDDTTTMRNALVNVYGRCESPDDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQ 449

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMY 534
           L   ++  G+      F ++L GA +IG+ G+  + +H  + +SG   +  +  +L++MY
Sbjct: 450 LFRTMQQQGIQPDRVNFMTIL-GACTIGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMY 508

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++   ++ A  + +EM+++ + +W  +I G+A HG +  ALE + K+  + I  + +T+I
Sbjct: 509 AKAGELDVAEVILQEMDEQQITAWNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFI 568

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           +VL+AC+ +  ++EG K   S   E G+   +     + ++  + GS+  A     SMP+
Sbjct: 569 SVLNACTSSTSLAEG-KMIHSNAVECGLDSDVIVKNALTNMYSKCGSMENARRIFDSMPI 627

Query: 655 SADVLVWRTFLGACRVHGDTE 675
            + V  W   L A   HG++E
Sbjct: 628 RSAV-SWNGMLQAYAQHGESE 647



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 173/586 (29%), Positives = 294/586 (50%), Gaps = 11/586 (1%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YS+CG L +A   F  +   R++VSW+ MIS+Y +     +A+ +F  ML  G  PN  
Sbjct: 1   MYSRCGSLGDAVAAFGKI-RARNVVSWNVMISAYSSYKSFQEALALFHAMLLEGVAPNAI 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
              AV+ +C +   +  G +++   L+ G+F + + V  AL++M+ K    L+ A  VF+
Sbjct: 60  TLVAVLNSCGSFRELRDGILVHALSLERGFFQNTL-VATALLNMYGKCGTLLD-AQSVFE 117

Query: 242 KMTEKNTVGWTLMITRCTQLGCP-RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           +M EKN V W  M+   +  GC  + A+ LF  M+L G   +  T   V+++  + +   
Sbjct: 118 EMAEKNVVTWNAMLGVYSLQGCCWKLAVELFTRMLLEGVKANVITFLNVLNSVVDPDALR 177

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            GK +HS    +  +LDV V  +LV+ Y KC   GS+ D+RKVFD M   +V +W ++I+
Sbjct: 178 KGKFIHSCVRESEHSLDVFVNTALVNTYTKC---GSLTDARKVFDGMPCRSVGTWNSMIS 234

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            Y  S  R  EA  +F  M Q     +  TF S+L AC N       + V     +    
Sbjct: 235 AYSIS-ERSGEAFFIFQRMQQEGERCDRVTFLSILDACVNPETLQHGKHVRESISETSFE 293

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           LD  VG +LI+MYAR    EDA + F  + + NL++++ ++ A+A + +  +A      +
Sbjct: 294 LDLFVGTALITMYARCRSPEDAAQVFGRMKQTNLITWSAIITAFADHGHCGEALRYFRMM 353

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  G+  +  TF SLL+G ++   + +  +IH  I + G +    + NAL+++Y RC + 
Sbjct: 354 QQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHGLDDTTTMRNALVNVYGRCESP 413

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  VF ++E  N+ISW SMI  + +      AL++F  M   GI+P+ + ++ +L AC
Sbjct: 414 DDARTVFDQLELPNLISWNSMIGIYVQCERHDDALQLFRTMQQQGIQPDRVNFMTILGAC 473

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           +  G      K      +E G+         +V++  ++G L  A   ++ M     +  
Sbjct: 474 T-IGSHGRTRKLVHQCVEESGLGGSPLVQTSLVNMYAKAGELDVAEVILQEMD-EQQITA 531

Query: 661 WRTFLGACRVHGDTELGKHAAEMI-LEQDPQDPAAHILLSNLYASA 705
           W   +    +HG +     A + + LE  P D    I + N   S+
Sbjct: 532 WNVLINGYALHGRSREALEAYQKLQLEAIPVDKVTFISVLNACTSS 577


>gi|449486805|ref|XP_004157408.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At4g33170-like [Cucumis sativus]
          Length = 1573

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/722 (38%), Positives = 447/722 (61%), Gaps = 10/722 (1%)

Query: 144  DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +I +W+  ++ +++ G+ V AI  F  +L      +      ++ A    +++ +G  I+
Sbjct: 858  NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917

Query: 204  GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
              ++K   F   V V  +L++M+ K  V + +A K F    E + + W  MI+   Q   
Sbjct: 918  ALVIKSS-FAPVVPVSNSLMNMYSKAGV-VYAAEKTFINSPELDLISWNTMISSYAQNNL 975

Query: 264  PRDAIRLFLDMILSGFLPDRFTLSGVVSACS---ELELFTSGKQLHSWAIRTGLALDVCV 320
              +AI  F D++  G  PD+FTL+ V+ ACS   E E FT G Q+H +AI+ G+  D  V
Sbjct: 976  EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035

Query: 321  GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
              +L+D+Y+K    G +D++  +     D ++ SW AI+ GY++S  + ++A++ FS M 
Sbjct: 1036 STALIDLYSK---GGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN-KSRKALEHFSLMH 1091

Query: 381  QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
            +  +  +  T A+ +KA G L++    +Q+  +A+K G   D  V + ++ MY + G M 
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMP 1151

Query: 441  DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            +A + F  +   + V++ TM+  Y +N + + A  + H +  +GV    YTFA+L+  +S
Sbjct: 1152 NALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASS 1211

Query: 501  SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
             + A+ +G+QIHA ++K  +  +H +  +L+ MY +C +V+ A++VF++M+ R V+ W +
Sbjct: 1212 CLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNA 1271

Query: 561  MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
            M+ G A+HG    AL +F  M ++GI+P+ +T+I VLSACSH+GL SE +K+F +M+  +
Sbjct: 1272 MLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTY 1331

Query: 621  GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            GI   +EHY+C+VD LGR+G + EA   I SMP  A   ++R  LGACR  GD E  K  
Sbjct: 1332 GITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRV 1391

Query: 681  AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
            A+ +L  DP D +A++LLSN+YA++  W+ V + R  MK +N+ K+ G SWI+  NKVH 
Sbjct: 1392 ADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHL 1451

Query: 741  FHVGETSHPKTLEIYAELDQLALKIKEFG-YLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
            F V + SHP+   IY +++ L  +I+E G Y+PDT+F L ++EEE+K + L+ HSEK+A+
Sbjct: 1452 FVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAI 1511

Query: 800  AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
            AFGLIST  S  IRV KNLRVCGDCH+AIK IS +T REIVLRD+NRFHH ++G CSC D
Sbjct: 1512 AFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGD 1571

Query: 860  YW 861
            YW
Sbjct: 1572 YW 1573



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 277/557 (49%), Gaps = 14/557 (2%)

Query: 47   SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
            + +L   L+ G++  AI     + +     D  T  ++L + + + +  LG+ +H+L+ +
Sbjct: 863  NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922

Query: 107  SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
            S   P   + NSL+++YSK G +  A K F +   + D++SW++MISSY     +++AI 
Sbjct: 923  SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAIC 981

Query: 167  MFVEMLELGFCPNEYCFSAVIRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
             F ++L  G  P+++  ++V+RACS     E   +G  ++ + +KCG  + D  V  ALI
Sbjct: 982  TFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIN-DSFVSTALI 1040

Query: 224  DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            D++ KG    E+ + +  K  + +   W  ++    +    R A+  F  M   G   D 
Sbjct: 1041 DLYSKGGKMDEAEFLLHGKY-DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDE 1099

Query: 284  FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
             TL+  + A   L     GKQ+ ++AI+ G   D+ V   ++DMY KC   G + ++ ++
Sbjct: 1100 ITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC---GDMPNALEL 1156

Query: 344  FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
            F  +   + ++WT +I+GY+++G  D  A+ ++  M    V P+ +TFA+++KA   L  
Sbjct: 1157 FGEISRPDEVAWTTMISGYIENGDED-HALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215

Query: 404  SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
                +Q++ + VK   +LD  VG SL+ MY + G ++DA + F  +  + +V +N M+  
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275

Query: 464  YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFES 522
             A++ + ++A  L   ++  G+     TF  +LS  S  G   +  +    + K+ G   
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335

Query: 523  NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK-HGFAARALEIFYKM 581
                Y+ L+    R   ++ A  V   M  +   S    + G  +  G A  A  +  K+
Sbjct: 1336 EIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395

Query: 582  LADGIKPNGITYIAVLS 598
            LA  + P+  +   +LS
Sbjct: 1396 LA--LDPSDSSAYVLLS 1410



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 273/583 (46%), Gaps = 41/583 (7%)

Query: 95   HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             + + VH    +   E +  +  +L+++Y K G + +A  +F  M  +RD V W+ M+ +
Sbjct: 734  QVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKM-PERDAVLWNVMLKA 792

Query: 155  YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            YV    Q +A+  F      GF P+      VI                      G  +S
Sbjct: 793  YVENSFQDEALRFFSAFHRSGFXPDFSNLHCVI----------------------GGVNS 830

Query: 215  DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            DV          VK       A K+F      N   W   +T     G    AI  F  +
Sbjct: 831  DVSNNRKRHAEQVKA-----YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885

Query: 275  ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            + S    D  TL  ++SA    +    G+Q+H+  I++  A  V V  SL++MY+K    
Sbjct: 886  LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKA--- 942

Query: 335  GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
            G V  + K F    + +++SW  +I+ Y Q+   + EA+  F D+++  + P+ FT ASV
Sbjct: 943  GVVYAAEKTFINSPELDLISWNTMISSYAQN-NLEMEAICTFRDLLRDGLKPDQFTLASV 1001

Query: 395  LKACGNLLDS---NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            L+AC    +     +  QV+ +A+K G   D  V  +LI +Y++ G+M++A       ++
Sbjct: 1002 LRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYD 1061

Query: 452  KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
             +L S+N ++  Y K+  S KA E    + + G+     T A+ +  +  +  + +G+QI
Sbjct: 1062 FDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI 1121

Query: 512  HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
             A  IK GF ++  + + ++ MY +C ++  A ++F E+   + ++WT+MI+G+ ++G  
Sbjct: 1122 QAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDE 1181

Query: 572  ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY-- 629
              AL +++ M   G++P+  T+  ++ A S    + +G +   ++     +   ++H+  
Sbjct: 1182 DHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK---LDYSLDHFVG 1238

Query: 630  ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
              +VD+  + GS+ +A    R M +   V+ W   L     HG
Sbjct: 1239 TSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHG 1280



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 281/599 (46%), Gaps = 44/599 (7%)

Query: 86   KSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDI 145
            +S I   +  LGK  H+ +  S   P+  + N+LI++YSKCG L  A ++F    + RD+
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDK-SSDRDL 677

Query: 146  VSWSSMISSYVNRGKQ-----VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            V+W+S++++Y           ++   +F  + E GF       + +++ C  +  V +  
Sbjct: 678  VTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE 737

Query: 201  IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
             ++G+ +K G F+ D+ V  AL++++ K  + +  A  +FDKM E++ V W +M+    +
Sbjct: 738  TVHGYAVKIG-FELDLFVSGALVNIYCKYGL-VGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 261  LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                 +A+R F     SGF PD   L  V+   +     ++ ++ H+  ++         
Sbjct: 796  NSFQDEALRFFSAFHRSGFXPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKA-------- 845

Query: 321  GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
                   YA            K+F      N+ +W   +T ++ + G+   A+  F  ++
Sbjct: 846  -------YAM-----------KMFPFDQGSNIFAWNKKLTEFLHA-GQIVAAIDCFKTLL 886

Query: 381  QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
            +  +  +  T   +L A     D ++ EQ++   +K   A    V NSL++MY+++G + 
Sbjct: 887  RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 441  DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
             A K F +  E +L+S+NTM+ +YA+N    +A     ++   G+    +T AS+L  A 
Sbjct: 947  AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLR-AC 1005

Query: 501  SIGAIGK----GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
            S G  G+    G Q+H   IK G  ++  +  ALI +YS+   ++ A  +     D ++ 
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065

Query: 557  SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
            SW +++ G+ K   + +ALE F  M   GI  + IT    + A      + +G K  ++ 
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQG-KQIQAY 1124

Query: 617  YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
              + G    +   + ++D+  + G +  ALE    +    D + W T +     +GD +
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGDED 1182


>gi|449447363|ref|XP_004141438.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Cucumis sativus]
          Length = 1573

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 281/722 (38%), Positives = 447/722 (61%), Gaps = 10/722 (1%)

Query: 144  DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +I +W+  ++ +++ G+ V AI  F  +L      +      ++ A    +++ +G  I+
Sbjct: 858  NIFAWNKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIH 917

Query: 204  GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
              ++K   F   V V  +L++M+ K  V + +A K F    E + + W  MI+   Q   
Sbjct: 918  ALVIKSS-FAPVVPVSNSLMNMYSKAGV-VYAAEKTFINSPELDLISWNTMISSYAQNNL 975

Query: 264  PRDAIRLFLDMILSGFLPDRFTLSGVVSACS---ELELFTSGKQLHSWAIRTGLALDVCV 320
              +AI  F D++  G  PD+FTL+ V+ ACS   E E FT G Q+H +AI+ G+  D  V
Sbjct: 976  EMEAICTFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFV 1035

Query: 321  GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
              +L+D+Y+K    G +D++  +     D ++ SW AI+ GY++S  + ++A++ FS M 
Sbjct: 1036 STALIDLYSK---GGKMDEAEFLLHGKYDFDLASWNAIMFGYIKSN-KSRKALEHFSLMH 1091

Query: 381  QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
            +  +  +  T A+ +KA G L++    +Q+  +A+K G   D  V + ++ MY + G M 
Sbjct: 1092 EMGIPIDEITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKCGDMP 1151

Query: 441  DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            +A + F  +   + V++ TM+  Y +N + + A  + H +  +GV    YTFA+L+  +S
Sbjct: 1152 NALELFGEISRPDEVAWTTMISGYIENGDEDHALSVYHLMRVSGVQPDEYTFATLIKASS 1211

Query: 501  SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
             + A+ +G+QIHA ++K  +  +H +  +L+ MY +C +V+ A++VF++M+ R V+ W +
Sbjct: 1212 CLTALEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNA 1271

Query: 561  MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
            M+ G A+HG    AL +F  M ++GI+P+ +T+I VLSACSH+GL SE +K+F +M+  +
Sbjct: 1272 MLLGLAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTY 1331

Query: 621  GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            GI   +EHY+C+VD LGR+G + EA   I SMP  A   ++R  LGACR  GD E  K  
Sbjct: 1332 GITPEIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRV 1391

Query: 681  AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
            A+ +L  DP D +A++LLSN+YA++  W+ V + R  MK +N+ K+ G SWI+  NKVH 
Sbjct: 1392 ADKLLALDPSDSSAYVLLSNIYAASRQWDDVTDARNMMKLKNVKKDPGFSWIDVKNKVHL 1451

Query: 741  FHVGETSHPKTLEIYAELDQLALKIKEFG-YLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
            F V + SHP+   IY +++ L  +I+E G Y+PDT+F L ++EEE+K + L+ HSEK+A+
Sbjct: 1452 FVVDDRSHPQASLIYEKIEDLMKRIREEGSYVPDTDFTLLDVEEEEKERALYYHSEKLAI 1511

Query: 800  AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
            AFGLIST  S  IRV KNLRVCGDCH+AIK IS +T REIVLRD+NRFHH ++G CSC D
Sbjct: 1512 AFGLISTPPSATIRVIKNLRVCGDCHSAIKCISKLTQREIVLRDANRFHHFRNGTCSCGD 1571

Query: 860  YW 861
            YW
Sbjct: 1572 YW 1573



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 277/557 (49%), Gaps = 14/557 (2%)

Query: 47   SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
            + +L   L+ G++  AI     + +     D  T  ++L + + + +  LG+ +H+L+ +
Sbjct: 863  NKKLTEFLHAGQIVAAIDCFKTLLRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIK 922

Query: 107  SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
            S   P   + NSL+++YSK G +  A K F +   + D++SW++MISSY     +++AI 
Sbjct: 923  SSFAPVVPVSNSLMNMYSKAGVVYAAEKTFIN-SPELDLISWNTMISSYAQNNLEMEAIC 981

Query: 167  MFVEMLELGFCPNEYCFSAVIRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
             F ++L  G  P+++  ++V+RACS     E   +G  ++ + +KCG  + D  V  ALI
Sbjct: 982  TFRDLLRDGLKPDQFTLASVLRACSTGDEGEYFTLGSQVHVYAIKCGIIN-DSFVSTALI 1040

Query: 224  DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            D++ KG    E+ + +  K  + +   W  ++    +    R A+  F  M   G   D 
Sbjct: 1041 DLYSKGGKMDEAEFLLHGKY-DFDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDE 1099

Query: 284  FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
             TL+  + A   L     GKQ+ ++AI+ G   D+ V   ++DMY KC   G + ++ ++
Sbjct: 1100 ITLATAIKASGCLINLKQGKQIQAYAIKLGFNNDLWVSSGVLDMYIKC---GDMPNALEL 1156

Query: 344  FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
            F  +   + ++WT +I+GY+++G  D  A+ ++  M    V P+ +TFA+++KA   L  
Sbjct: 1157 FGEISRPDEVAWTTMISGYIENGDED-HALSVYHLMRVSGVQPDEYTFATLIKASSCLTA 1215

Query: 404  SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
                +Q++ + VK   +LD  VG SL+ MY + G ++DA + F  +  + +V +N M+  
Sbjct: 1216 LEQGKQIHANVVKLDYSLDHFVGTSLVDMYCKCGSVQDAYRVFRKMDVRKVVFWNAMLLG 1275

Query: 464  YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFES 522
             A++ + ++A  L   ++  G+     TF  +LS  S  G   +  +    + K+ G   
Sbjct: 1276 LAQHGHVDEALNLFRTMQSNGIQPDKVTFIGVLSACSHSGLFSEAYKYFDAMFKTYGITP 1335

Query: 523  NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK-HGFAARALEIFYKM 581
                Y+ L+    R   ++ A  V   M  +   S    + G  +  G A  A  +  K+
Sbjct: 1336 EIEHYSCLVDALGRAGRIQEAENVIASMPFKASASMYRALLGACRTKGDAETAKRVADKL 1395

Query: 582  LADGIKPNGITYIAVLS 598
            LA  + P+  +   +LS
Sbjct: 1396 LA--LDPSDSSAYVLLS 1410



 Score =  198 bits (504), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 148/583 (25%), Positives = 273/583 (46%), Gaps = 41/583 (7%)

Query: 95   HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             + + VH    +   E +  +  +L+++Y K G + +A  +F  M  +RD V W+ M+ +
Sbjct: 734  QVSETVHGYAVKIGFELDLFVSGALVNIYCKYGLVGQARLLFDKM-PERDAVLWNVMLKA 792

Query: 155  YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            YV    Q +A+  F      GF P+      VI                      G  +S
Sbjct: 793  YVENSFQDEALRFFSAFHRSGFFPDFSNLHCVI----------------------GGVNS 830

Query: 215  DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            DV          VK       A K+F      N   W   +T     G    AI  F  +
Sbjct: 831  DVSNNRKRHAEQVKA-----YAMKMFPFDQGSNIFAWNKKLTEFLHAGQIVAAIDCFKTL 885

Query: 275  ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            + S    D  TL  ++SA    +    G+Q+H+  I++  A  V V  SL++MY+K    
Sbjct: 886  LRSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKA--- 942

Query: 335  GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
            G V  + K F    + +++SW  +I+ Y Q+   + EA+  F D+++  + P+ FT ASV
Sbjct: 943  GVVYAAEKTFINSPELDLISWNTMISSYAQN-NLEMEAICTFRDLLRDGLKPDQFTLASV 1001

Query: 395  LKACGNLLDS---NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            L+AC    +     +  QV+ +A+K G   D  V  +LI +Y++ G+M++A       ++
Sbjct: 1002 LRACSTGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYD 1061

Query: 452  KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
             +L S+N ++  Y K+  S KA E    + + G+     T A+ +  +  +  + +G+QI
Sbjct: 1062 FDLASWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQGKQI 1121

Query: 512  HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
             A  IK GF ++  + + ++ MY +C ++  A ++F E+   + ++WT+MI+G+ ++G  
Sbjct: 1122 QAYAIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEISRPDEVAWTTMISGYIENGDE 1181

Query: 572  ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY-- 629
              AL +++ M   G++P+  T+  ++ A S    + +G +   ++     +   ++H+  
Sbjct: 1182 DHALSVYHLMRVSGVQPDEYTFATLIKASSCLTALEQGKQIHANVVK---LDYSLDHFVG 1238

Query: 630  ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
              +VD+  + GS+ +A    R M +   V+ W   L     HG
Sbjct: 1239 TSLVDMYCKCGSVQDAYRVFRKMDVRK-VVFWNAMLLGLAQHG 1280



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 147/599 (24%), Positives = 281/599 (46%), Gaps = 44/599 (7%)

Query: 86   KSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDI 145
            +S I   +  LGK  H+ +  S   P+  + N+LI++YSKCG L  A ++F    + RD+
Sbjct: 619  RSAIAMADLKLGKRAHARIVTSGDLPDRYLTNNLITMYSKCGSLCSARQVFDK-SSDRDL 677

Query: 146  VSWSSMISSYVNRGKQ-----VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            V+W+S++++Y           ++   +F  + E GF       + +++ C  +  V +  
Sbjct: 678  VTWNSILAAYAQFADSSYENVLEGFRLFGLLREFGFSITRLTLAPLLKLCLLSGFVQVSE 737

Query: 201  IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
             ++G+ +K G F+ D+ V  AL++++ K  + +  A  +FDKM E++ V W +M+    +
Sbjct: 738  TVHGYAVKIG-FELDLFVSGALVNIYCKYGL-VGQARLLFDKMPERDAVLWNVMLKAYVE 795

Query: 261  LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                 +A+R F     SGF PD   L  V+   +     ++ ++ H+  ++         
Sbjct: 796  NSFQDEALRFFSAFHRSGFFPDFSNLHCVIGGVN--SDVSNNRKRHAEQVKA-------- 845

Query: 321  GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
                   YA            K+F      N+ +W   +T ++ + G+   A+  F  ++
Sbjct: 846  -------YAM-----------KMFPFDQGSNIFAWNKKLTEFLHA-GQIVAAIDCFKTLL 886

Query: 381  QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
            +  +  +  T   +L A     D ++ EQ++   +K   A    V NSL++MY+++G + 
Sbjct: 887  RSTIGHDSVTLVIILSAAVGADDLDLGEQIHALVIKSSFAPVVPVSNSLMNMYSKAGVVY 946

Query: 441  DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
             A K F +  E +L+S+NTM+ +YA+N    +A     ++   G+    +T AS+L  A 
Sbjct: 947  AAEKTFINSPELDLISWNTMISSYAQNNLEMEAICTFRDLLRDGLKPDQFTLASVLR-AC 1005

Query: 501  SIGAIGK----GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
            S G  G+    G Q+H   IK G  ++  +  ALI +YS+   ++ A  +     D ++ 
Sbjct: 1006 STGDEGEYFTLGSQVHVYAIKCGIINDSFVSTALIDLYSKGGKMDEAEFLLHGKYDFDLA 1065

Query: 557  SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
            SW +++ G+ K   + +ALE F  M   GI  + IT    + A      + +G K  ++ 
Sbjct: 1066 SWNAIMFGYIKSNKSRKALEHFSLMHEMGIPIDEITLATAIKASGCLINLKQG-KQIQAY 1124

Query: 617  YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
              + G    +   + ++D+  + G +  ALE    +    D + W T +     +GD +
Sbjct: 1125 AIKLGFNNDLWVSSGVLDMYIKCGDMPNALELFGEIS-RPDEVAWTTMISGYIENGDED 1182


>gi|356518183|ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score =  556 bits (1432), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 309/821 (37%), Positives = 477/821 (58%), Gaps = 30/821 (3%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
            GR+++A    D M  +    D+  +++++K+ + +   +   L+ S   R+ L P+ V L
Sbjct: 776  GRIREARVLFDGMGLR----DVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTL 831

Query: 117  NSLISLY-SKCGDLNEANKIFKSMGNK----------RDIVSWSSMISSYVNRGKQVDAI 165
             +L  +  SK   L    K  K+ G K           D+++W+  +S ++ RG+  +A+
Sbjct: 832  CTLARVVKSKQNVLEWQLKQLKAYGTKLFMYDDDDDGSDVIAWNKTLSWFLQRGETWEAV 891

Query: 166  HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
              FV+M+      +   F  ++   +    + +G  I+G +++ G  D  V VG  LI+M
Sbjct: 892  DCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSG-LDQVVSVGNCLINM 950

Query: 226  FVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            +VK GSV    A  VF +M E + V W  MI+ C   G    ++ +F+D++  G LPD+F
Sbjct: 951  YVKTGSV--SRARTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQF 1008

Query: 285  TLSGVVSACSEL----ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
            T++ V+ ACS L     L T   Q+H+ A++ G+ LD  V  +L+D+Y+K    G ++++
Sbjct: 1009 TVASVLRACSSLGGGCHLAT---QIHACAMKAGVVLDSFVSTTLIDVYSKS---GKMEEA 1062

Query: 341  RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
              +F      ++ SW A++ GY+ SG   K A++L+  M +     N  T A+  KA G 
Sbjct: 1063 EFLFVNQDGFDLASWNAMMHGYIVSGDFPK-ALRLYILMQESGERANQITLANAAKAAGG 1121

Query: 401  LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
            L+     +Q+    VKRG  LD  V + ++ MY + G ME AR+ F  +   + V++ TM
Sbjct: 1122 LVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIPSPDDVAWTTM 1181

Query: 461  VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
            +    +N   E A    H +  + V    YTFA+L+   S + A+ +G QIHA  +K   
Sbjct: 1182 ISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNC 1241

Query: 521  ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
              +  +  +L+ MY++C N+E A  +FK      + SW +MI G A+HG A  AL+ F +
Sbjct: 1242 AFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGNAEEALQFFEE 1301

Query: 581  MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
            M + G+ P+ +T+I VLSACSH+GL+SE +++F SM   +GI   +EHY+C+VD L R+G
Sbjct: 1302 MKSRGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGIEPEIEHYSCLVDALSRAG 1361

Query: 641  SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
             + EA + I SMP  A   ++RT L ACRV  D E GK  AE +L  +P D AA++LLSN
Sbjct: 1362 RIREAEKVISSMPFEASASMYRTLLNACRVQVDRETGKRVAEKLLALEPSDSAAYVLLSN 1421

Query: 701  LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
            +YA+A  WE VA+ R  M++ N+ K+ G SW++  NKVH F  G+ SH +T  IY +++ 
Sbjct: 1422 VYAAANQWENVASARNMMRKANVKKDPGFSWVDLKNKVHLFVAGDRSHEETDVIYNKVEY 1481

Query: 761  LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
            +  +I+E GYLPDT+F L ++EEE K   L+ HSEK+A+A+GL+ T  S  +RV KNLRV
Sbjct: 1482 IMKRIREEGYLPDTDFALVDVEEEDKECSLYYHSEKLAIAYGLMKTPPSTTLRVIKNLRV 1541

Query: 821  CGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            CGDCH AIKYIS V  RE+VLRD+NRFHH + G CSC DYW
Sbjct: 1542 CGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582



 Score =  228 bits (582), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 166/634 (26%), Positives = 303/634 (47%), Gaps = 78/634 (12%)

Query: 80   TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
            T + + K C+ S +    + +H    +  L+ +  +  +L+++Y+K G + EA  +F  M
Sbjct: 729  TLAPVFKMCLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGM 788

Query: 140  GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            G  RD+V W+ M+ +YV+ G + +A+ +F E    G  P++     + R   + +NV   
Sbjct: 789  G-LRDVVLWNVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTLARVVKSKQNVLEW 847

Query: 200  HI----IYG---FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
             +     YG   F+       SDV                                + W 
Sbjct: 848  QLKQLKAYGTKLFMYDDDDDGSDV--------------------------------IAWN 875

Query: 253  LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
              ++   Q G   +A+  F+DMI S    D  T   ++S  + L     GKQ+H   +R+
Sbjct: 876  KTLSWFLQRGETWEAVDCFVDMINSRVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRS 935

Query: 313  GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            GL   V VG  L++MY K    GSV  +R VF +M + +++SW  +I+G   S G ++ +
Sbjct: 936  GLDQVVSVGNCLINMYVKT---GSVSRARTVFWQMNEVDLVSWNTMISGCALS-GLEECS 991

Query: 373  VKLFSDMIQGQVAPNHFTFASVLKACGNLLDS-NVAEQVYTHAVKRGRALDDCVGNSLIS 431
            V +F D+++G + P+ FT ASVL+AC +L    ++A Q++  A+K G  LD  V  +LI 
Sbjct: 992  VGMFVDLLRGGLLPDQFTVASVLRACSSLGGGCHLATQIHACAMKAGVVLDSFVSTTLID 1051

Query: 432  MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
            +Y++SG+ME+A   F +    +L S+N M+  Y  + +  KA  L   ++++G   +  T
Sbjct: 1052 VYSKSGKMEEAEFLFVNQDGFDLASWNAMMHGYIVSGDFPKALRLYILMQESGERANQIT 1111

Query: 492  FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
             A+    A  +  + +G+QI A ++K GF  +  + + ++ MY +C  +E+A ++F E+ 
Sbjct: 1112 LANAAKAAGGLVGLKQGKQIQAVVVKRGFNLDLFVISGVLDMYLKCGEMESARRIFNEIP 1171

Query: 552  DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
              + ++WT+MI+G  ++G    AL  ++ M    ++P+  T+  ++ ACS    + +G +
Sbjct: 1172 SPDDVAWTTMISGCVENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQ 1231

Query: 612  ------------------HFRSMYDEHGIVQ------------RMEHYACMVDLLGRSGS 641
                                  MY + G ++            R+  +  M+  L + G+
Sbjct: 1232 IHANTVKLNCAFDPFVMTSLVDMYAKCGNIEDARGLFKRTNTSRIASWNAMIVGLAQHGN 1291

Query: 642  LTEALEFIRSMP---LSADVLVWRTFLGACRVHG 672
              EAL+F   M    ++ D + +   L AC   G
Sbjct: 1292 AEEALQFFEEMKSRGVTPDRVTFIGVLSACSHSG 1325



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 153/594 (25%), Positives = 278/594 (46%), Gaps = 35/594 (5%)

Query: 84   LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN-K 142
            +L+  I + +  LGK  H+ +  S   P+  + N+LI++YSKCG L+ A K+F +  +  
Sbjct: 632  ILRHAIAASDLPLGKRAHARILTSGHHPDRFLTNNLITMYSKCGSLSSARKLFDTTPDTS 691

Query: 143  RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
            RD+V+W++++S++ ++ +  D  H+F  +         +  + V + C  + + +    +
Sbjct: 692  RDLVTWNAILSAHADKAR--DGFHLFRLLRRSFVSATRHTLAPVFKMCLLSASPSAAESL 749

Query: 203  YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
            +G+ +K G    DV V  AL++++ K    +  A  +FD M  ++ V W +M+      G
Sbjct: 750  HGYAVKIG-LQWDVFVAGALVNIYAKFG-RIREARVLFDGMGLRDVVLWNVMMKAYVDTG 807

Query: 263  CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
               +A+ LF +   +G  PD  TL      C+   +  S + +  W ++   A     G 
Sbjct: 808  LEYEALLLFSEFNRTGLRPDDVTL------CTLARVVKSKQNVLEWQLKQLKAY----GT 857

Query: 323  SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
             L  MY      GS              +V++W   ++ ++Q  G   EAV  F DMI  
Sbjct: 858  KLF-MYDDDDD-GS--------------DVIAWNKTLSWFLQR-GETWEAVDCFVDMINS 900

Query: 383  QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            +VA +  TF  +L     L    + +Q++   V+ G      VGN LI+MY ++G +  A
Sbjct: 901  RVACDGLTFVVMLSVVAGLNCLELGKQIHGIVVRSGLDQVVSVGNCLINMYVKTGSVSRA 960

Query: 443  RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
            R  F  + E +LVS+NTM+   A +   E +  +  ++   G+    +T AS+L   SS+
Sbjct: 961  RTVFWQMNEVDLVSWNTMISGCALSGLEECSVGMFVDLLRGGLLPDQFTVASVLRACSSL 1020

Query: 503  -GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
             G      QIHA  +K+G   +  +   LI +YS+   +E A  +F   +  ++ SW +M
Sbjct: 1021 GGGCHLATQIHACAMKAGVVLDSFVSTTLIDVYSKSGKMEEAEFLFVNQDGFDLASWNAM 1080

Query: 562  ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
            + G+   G   +AL ++  M   G + N IT      A      + +G K  +++  + G
Sbjct: 1081 MHGYIVSGDFPKALRLYILMQESGERANQITLANAAKAAGGLVGLKQG-KQIQAVVVKRG 1139

Query: 622  IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
                +   + ++D+  + G +  A      +P S D + W T +  C  +G  E
Sbjct: 1140 FNLDLFVISGVLDMYLKCGEMESARRIFNEIP-SPDDVAWTTMISGCVENGQEE 1192



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 182/398 (45%), Gaps = 36/398 (9%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +P  F++     A S+L L   GK+ H+  + +G   D  +  +L+ MY+KC   GS+  
Sbjct: 626 IPQWFSILRHAIAASDLPL---GKRAHARILTSGHHPDRFLTNNLITMYSKC---GSLSS 679

Query: 340 SRKVFDRMLD--HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +RK+FD   D   ++++W AI++ +     + ++   LF  + +  V+    T A V K 
Sbjct: 680 ARKLFDTTPDTSRDLVTWNAILSAHAD---KARDGFHLFRLLRRSFVSATRHTLAPVFKM 736

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C      + AE ++ +AVK G   D  V  +L+++YA+ GR+ +AR  F+ +  +++V +
Sbjct: 737 CLLSASPSAAESLHGYAVKIGLQWDVFVAGALVNIYAKFGRIREARVLFDGMGLRDVVLW 796

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N M+ AY       +A  L  E   TG+     T  +L                 AR++K
Sbjct: 797 NVMMKAYVDTGLEYEALLLFSEFNRTGLRPDDVTLCTL-----------------ARVVK 839

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           S           L +  ++       F    + +  +VI+W   ++ F + G    A++ 
Sbjct: 840 SKQNVLEWQLKQLKAYGTKL------FMYDDDDDGSDVIAWNKTLSWFLQRGETWEAVDC 893

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F  M+   +  +G+T++ +LS  +    +  G K    +    G+ Q +    C++++  
Sbjct: 894 FVDMINSRVACDGLTFVVMLSVVAGLNCLELG-KQIHGIVVRSGLDQVVSVGNCLINMYV 952

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           ++GS++ A      M    D++ W T +  C + G  E
Sbjct: 953 KTGSVSRARTVFWQMN-EVDLVSWNTMISGCALSGLEE 989



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/159 (28%), Positives = 76/159 (47%), Gaps = 8/159 (5%)

Query: 54   LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
            + +G+ + A+FT   M      PD  T++ L+K+C        G+ +H+   +     + 
Sbjct: 1186 VENGQEEHALFTYHHMRLSKVQPDEYTFATLVKACSLLTALEQGRQIHANTVKLNCAFDP 1245

Query: 114  VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
             ++ SL+ +Y+KCG++ +A  +FK     R I SW++MI      G   +A+  F EM  
Sbjct: 1246 FVMTSLVDMYAKCGNIEDARGLFKRTNTSR-IASWNAMIVGLAQHGNAEEALQFFEEMKS 1304

Query: 174  LGFCPNEYCFSAVIRACSNT-------ENVAIGHIIYGF 205
             G  P+   F  V+ ACS++       EN      IYG 
Sbjct: 1305 RGVTPDRVTFIGVLSACSHSGLVSEAYENFYSMQKIYGI 1343


>gi|356557757|ref|XP_003547177.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
            chloroplastic-like [Glycine max]
          Length = 1227

 Score =  555 bits (1431), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 293/795 (36%), Positives = 459/795 (57%), Gaps = 12/795 (1%)

Query: 69   MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
            M+QK +  DL+ YS +L+ C   +    GK+VHS+++ + +    V+   L+ +Y  CG 
Sbjct: 443  MSQK-SELDLNAYSSILQLCAEHKCLQEGKMVHSVISSNGIPIEGVLGAKLVFMYVSCGA 501

Query: 129  LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
            L E  +IF  + +   +  W+ M+S Y   G   ++I++F +M +LG   N Y FS +++
Sbjct: 502  LREGRRIFDHILSDNKVFLWNLMMSEYAKIGDYRESIYLFKKMQKLGITGNSYTFSCILK 561

Query: 189  ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
              +    V     I+G + K G+   +  V   +   F  G VD  SA+K+FD++ +++ 
Sbjct: 562  CFATLGRVGECKRIHGCVYKLGFGSYNTVVNSLIATYFKSGEVD--SAHKLFDELGDRDV 619

Query: 249  VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
            V W  MI+ C   G    A+  F+ M++     D  TL   V+AC+ +   + G+ LH  
Sbjct: 620  VSWNSMISGCVMNGFSHSALEFFVQMLILRVGVDLATLVNSVAACANVGSLSLGRALHGQ 679

Query: 309  AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
             ++   + +V    +L+DMY+KC   G+++D+ + F++M    V+SWT++I  YV+ G  
Sbjct: 680  GVKACFSREVMFNNTLLDMYSKC---GNLNDAIQAFEKMGQKTVVSWTSLIAAYVREGLY 736

Query: 369  DKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVG 426
            D +A++LF +M    V+P+ ++  SVL AC  GN LD      V+ +  K   AL   V 
Sbjct: 737  D-DAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDK--GRDVHNYIRKNNMALCLPVS 793

Query: 427  NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
            N+L+ MYA+ G ME+A   F  +  K++VS+NTM+  Y+KN    +A +L  E++     
Sbjct: 794  NALMDMYAKCGSMEEAYLVFSQIPVKDIVSWNTMIGGYSKNSLPNEALKLFAEMQKESR- 852

Query: 487  TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
                T A LL    S+ A+  G  IH  I+++G+ S   + NALI MY +C ++  A  +
Sbjct: 853  PDGITMACLLPACGSLAALEIGRGIHGCILRNGYSSELHVANALIDMYVKCGSLVHARLL 912

Query: 547  FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            F  + ++++I+WT MI+G   HG    A+  F KM   GIKP+ IT+ ++L ACSH+GL+
Sbjct: 913  FDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILYACSHSGLL 972

Query: 607  SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            +EGW  F SM  E  +  ++EHYACMVDLL R+G+L++A   I +MP+  D  +W   L 
Sbjct: 973  NEGWGFFNSMISECNMEPKLEHYACMVDLLARTGNLSKAYNLIETMPIKPDATIWGALLC 1032

Query: 667  ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
             CR+H D EL +  AE + E +P +   ++LL+N+YA A  WE V  +R+R+ +R L K 
Sbjct: 1033 GCRIHHDVELAEKVAEHVFELEPDNAGYYVLLANIYAEAEKWEEVKKLRERIGKRGLKKS 1092

Query: 727  AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
             GCSWIE   K   F   +T+HP+   I++ L+ L +K+K  G+ P   + L    + +K
Sbjct: 1093 PGCSWIEVQGKFTTFVSADTAHPQAKSIFSLLNNLRIKMKNEGHSPKMRYALINAGDMEK 1152

Query: 787  VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
               L  HSEK+A+AFG+++    + IRV KNLRVC DCH   K++S  T REI+LRDSNR
Sbjct: 1153 EVALCGHSEKLAMAFGILNLPSGRTIRVAKNLRVCDDCHEMAKFMSKTTRREIILRDSNR 1212

Query: 847  FHHIKDGKCSCNDYW 861
            FHH KDG CSC D+W
Sbjct: 1213 FHHFKDGFCSCRDFW 1227



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/251 (32%), Positives = 134/251 (53%), Gaps = 6/251 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G    AI     M  KG  PD+ + + +L +C    +   G+ VH+ + ++ +   
Sbjct: 730 YVREGLYDDAIRLFYEMESKGVSPDVYSMTSVLHACACGNSLDKGRDVHNYIRKNNMALC 789

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+L+ +Y+KCG + EA  +F  +  K DIVSW++MI  Y       +A+ +F EM 
Sbjct: 790 LPVSNALMDMYAKCGSMEEAYLVFSQIPVK-DIVSWNTMIGGYSKNSLPNEALKLFAEMQ 848

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           +    P+    + ++ AC +   + IG  I+G +L+ GY  S++ V  ALIDM+VK GS 
Sbjct: 849 KESR-PDGITMACLLPACGSLAALEIGRGIHGCILRNGY-SSELHVANALIDMYVKCGS- 905

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A  +FD + EK+ + WT+MI+ C   G   +AI  F  M ++G  PD  T + ++ 
Sbjct: 906 -LVHARLLFDMIPEKDLITWTVMISGCGMHGLGNEAIATFQKMRIAGIKPDEITFTSILY 964

Query: 292 ACSELELFTSG 302
           ACS   L   G
Sbjct: 965 ACSHSGLLNEG 975


>gi|359475985|ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score =  555 bits (1430), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 303/822 (36%), Positives = 481/822 (58%), Gaps = 34/822 (4%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR----SRNFHLGKLVHSLLTRSKLEPN 112
            GR++ A    D M ++    D+  ++++LK  ++       F L    H    RS L P+
Sbjct: 776  GRMRDARLLFDWMRER----DVVLWNMMLKGYVQLGLEKEAFQLFSEFH----RSGLRPD 827

Query: 113  ----SVILNSLISLYSKCG----DLNEANKIFKSMGNKR-DIVSWSSMISSYVNRGKQVD 163
                 +ILN +  +    G    D  +A     S+ +   D+  W+  +S  +  G    
Sbjct: 828  EFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFCWNKKLSECLWAGDNWG 887

Query: 164  AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
            AI  FV M  L    +      V+ A + T+++ +G  ++G  +K G  DSDV V  +L+
Sbjct: 888  AIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSG-LDSDVSVANSLV 946

Query: 224  DMFVKGSVDLESAY---KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
            +M+ K    +  AY   +VF+ M   + + W  MI+ C Q     +++ LF+D++  G  
Sbjct: 947  NMYSK----MGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLK 1002

Query: 281  PDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            PD FTL+ V+ ACS L +     +Q+H  A++TG   D  V  +L+D+Y+K    G +++
Sbjct: 1003 PDHFTLASVLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKS---GKMEE 1059

Query: 340  SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            +  +F    D ++  W A++ GY+  G   K+A++LFS + +     +  T A+  KACG
Sbjct: 1060 AEFLFQNKDDLDLACWNAMMFGYI-IGNDGKKALELFSLIHKSGEKSDQITLATAAKACG 1118

Query: 400  NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
             L+  +  +Q++ HA+K G   D  V + ++ MY + G M +A   F  +   + V++ +
Sbjct: 1119 CLVLLDQGKQIHAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTS 1178

Query: 460  MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            M+     N N ++A  + H +  + V    YTFA+L+  +S + A+ +G Q+HA +IK  
Sbjct: 1179 MISGCVDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLD 1238

Query: 520  FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
              S+  +  +L+ MY++C N+E A+++FK+M  RN+  W +M+ G A+HG A  A+ +F 
Sbjct: 1239 CVSDPFVGTSLVDMYAKCGNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFK 1298

Query: 580  KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
             M + GI+P+ +++I +LSACSHAGL SE +++  SM +++GI   +EHY+C+VD LGR+
Sbjct: 1299 SMKSHGIEPDRVSFIGILSACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA 1358

Query: 640  GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
            G + EA + I +MP  A   + R  LGACR+ GD E GK  A  +   +P D AA++LLS
Sbjct: 1359 GLVQEADKVIETMPFKASASINRALLGACRIQGDVETGKRVAARLFALEPFDSAAYVLLS 1418

Query: 700  NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
            N+YA+A  W+ V + RK MK +N+ K+ G SWI+  N +H F V + SHP+   IY +++
Sbjct: 1419 NIYAAANRWDDVTDARKMMKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVE 1478

Query: 760  QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
            ++   I+E GY+PDT FVL ++E+E+K + L+ HSEK+A+A+GLIST  S  IRV KNLR
Sbjct: 1479 EMMKTIREDGYVPDTEFVLLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLR 1538

Query: 820  VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            VCGDCH AIKYIS V  REIVLRD+NRFHH +DG CSC DYW
Sbjct: 1539 VCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 172/631 (27%), Positives = 307/631 (48%), Gaps = 53/631 (8%)

Query: 55   NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            NDG  Q+ +    L+          T + +LK C+ S      + VH    +  LE +  
Sbjct: 704  NDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDVF 763

Query: 115  ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
            +  +L+++YSKCG + +A  +F  M  +RD+V W+ M+  YV  G + +A  +F E    
Sbjct: 764  VSGALVNIYSKCGRMRDARLLFDWM-RERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRS 822

Query: 175  GFCPNEYCFSAVIRACSNT---ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            G  P+E+    ++   S     E   +   +  +  K    D +  V C           
Sbjct: 823  GLRPDEFSVQLILNGVSEVNWDEGKWLADQVQAYAAKLSLSDDNPDVFC----------- 871

Query: 232  DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
                               W   ++ C   G    AI  F++M       D  TL  V++
Sbjct: 872  -------------------WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLA 912

Query: 292  ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            A +  +    GKQ+H  A+++GL  DV V  SLV+MY+K    G    +R+VF+ M   +
Sbjct: 913  AVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYSKM---GCAYFAREVFNDMKHLD 969

Query: 352  VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS-NVAEQV 410
            ++SW ++I+   QS   ++E+V LF D++   + P+HFT ASVL+AC +L+D  N++ Q+
Sbjct: 970  LISWNSMISSCAQS-SLEEESVNLFIDLLHEGLKPDHFTLASVLRACSSLIDGLNISRQI 1028

Query: 411  YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
            + HA+K G   D  V  +LI +Y++SG+ME+A   F++  + +L  +N M+  Y    + 
Sbjct: 1029 HVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDLDLACWNAMMFGYIIGNDG 1088

Query: 471  EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
            +KA EL   I  +G  +   T A+       +  + +G+QIHA  IK+GF+S+  + + +
Sbjct: 1089 KKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLHVNSGI 1148

Query: 531  ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
            + MY +C ++  A  VF  +   + ++WTSMI+G   +G   +AL I+++M    + P+ 
Sbjct: 1149 LDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIYHRMRQSRVMPDE 1208

Query: 591  ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA------CMVDLLGRSGSLTE 644
             T+  ++ A S    + +G    R +   H  V +++  +       +VD+  + G++ +
Sbjct: 1209 YTFATLIKASSCVTALEQG----RQL---HANVIKLDCVSDPFVGTSLVDMYAKCGNIED 1261

Query: 645  ALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            A    + M +  ++ +W   L     HG+ E
Sbjct: 1262 AYRLFKKMNVR-NIALWNAMLVGLAQHGNAE 1291



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 150/602 (24%), Positives = 286/602 (47%), Gaps = 48/602 (7%)

Query: 84   LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
            LL++ I + N  LGK  H+ +  S    +  + N+L+++YSKCG L+ A ++F +   +R
Sbjct: 627  LLRTAISTHNLLLGKCTHARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTP-ER 685

Query: 144  DIVSWSSMISSYV-----NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
            D+V+W++++ +Y      N G   + +H+F  +            + V++ C N+  +  
Sbjct: 686  DLVTWNAILGAYAASVDSNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWA 745

Query: 199  GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
               ++G+ +K G  + DV V  AL++++ K    +  A  +FD M E++ V W +M+   
Sbjct: 746  AEGVHGYAIKIG-LEWDVFVSGALVNIYSKCG-RMRDARLLFDWMRERDVVLWNMMLKGY 803

Query: 259  TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK----QLHSWAIRTGL 314
             QLG  ++A +LF +   SG  PD F++  +++  SE+  +  GK    Q+ ++A +  L
Sbjct: 804  VQLGLEKEAFQLFSEFHRSGLRPDEFSVQLILNGVSEVN-WDEGKWLADQVQAYAAKLSL 862

Query: 315  ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            +                      DD+  VF          W   ++  + +G  +  A++
Sbjct: 863  S----------------------DDNPDVF---------CWNKKLSECLWAGD-NWGAIE 890

Query: 375  LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
             F +M    +  +  T   VL A     D  + +QV+  AVK G   D  V NSL++MY+
Sbjct: 891  CFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAVKSGLDSDVSVANSLVNMYS 950

Query: 435  RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
            + G    AR+ F  +   +L+S+N+M+ + A++   E++  L  ++   G+    +T AS
Sbjct: 951  KMGCAYFAREVFNDMKHLDLISWNSMISSCAQSSLEEESVNLFIDLLHEGLKPDHFTLAS 1010

Query: 495  LLSGASS-IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
            +L   SS I  +    QIH   +K+G  ++  +   LI +YS+   +E A  +F+  +D 
Sbjct: 1011 VLRACSSLIDGLNISRQIHVHALKTGNIADSFVATTLIDVYSKSGKMEEAEFLFQNKDDL 1070

Query: 554  NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
            ++  W +M+ G+       +ALE+F  +   G K + IT      AC    L+ +G K  
Sbjct: 1071 DLACWNAMMFGYIIGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQG-KQI 1129

Query: 614  RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             +   + G    +   + ++D+  + G +  A      +    DV  W + +  C  +G+
Sbjct: 1130 HAHAIKAGFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDV-AWTSMISGCVDNGN 1188

Query: 674  TE 675
             +
Sbjct: 1189 ED 1190



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 78/340 (22%), Positives = 148/340 (43%), Gaps = 38/340 (11%)

Query: 412 THA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL- 468
           THA  V  G A D  + N+L++MY++ G +  AR+ F++  E++LV++N ++ AYA ++ 
Sbjct: 643 THARIVVSGSAGDHFLSNNLLTMYSKCGSLSSARQVFDTTPERDLVTWNAILGAYAASVD 702

Query: 469 ----NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
               N+++   L   +  +   T+  T A +L    + G +   E +H   IK G E + 
Sbjct: 703 SNDGNAQEGLHLFRLLRASLGSTTRMTLAPVLKLCLNSGCLWAAEGVHGYAIKIGLEWDV 762

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            +  AL+++YS+C  +  A  +F  M +R+V+ W  M+ G+ + G    A ++F +    
Sbjct: 763 FVSGALVNIYSKCGRMRDARLLFDWMRERDVVLWNMMLKGYVQLGLEKEAFQLFSEFHRS 822

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL--------- 635
           G++P+  +   +L+  S        W           +  +++ YA  + L         
Sbjct: 823 GLRPDEFSVQLILNGVSEVNWDEGKW-----------LADQVQAYAAKLSLSDDNPDVFC 871

Query: 636 ----------LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
                      G +    E    +  + +  D +     L A     D ELGK    + +
Sbjct: 872 WNKKLSECLWAGDNWGAIECFVNMNGLNIDYDAVTLLVVLAAVAGTDDLELGKQVHGIAV 931

Query: 686 EQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           +     D +    L N+Y+  G   +   +   MK  +LI
Sbjct: 932 KSGLDSDVSVANSLVNMYSKMGCAYFAREVFNDMKHLDLI 971



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 5/141 (3%)

Query: 54   LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK--SCIRSRNFHLGKLVHSLLTRSKLEP 111
            +++G   +A+     M Q    PD  T++ L+K  SC+ +     G+ +H+ + +     
Sbjct: 1184 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA--LEQGRQLHANVIKLDCVS 1241

Query: 112  NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
            +  +  SL+ +Y+KCG++ +A ++FK M N R+I  W++M+      G   +A+++F  M
Sbjct: 1242 DPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 1300

Query: 172  LELGFCPNEYCFSAVIRACSN 192
               G  P+   F  ++ ACS+
Sbjct: 1301 KSHGIEPDRVSFIGILSACSH 1321


>gi|224082698|ref|XP_002306801.1| predicted protein [Populus trichocarpa]
 gi|222856250|gb|EEE93797.1| predicted protein [Populus trichocarpa]
          Length = 787

 Score =  553 bits (1425), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 293/783 (37%), Positives = 478/783 (61%), Gaps = 8/783 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+  +LK+C    + H G  +H L+ +   +    + NSL+S+Y+KC D+  A K+F  M
Sbjct: 12  TFPCVLKACGVVEDIHRGAEIHGLIIKCGYDSIVFVANSLVSMYAKCNDILGARKLFDRM 71

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             + D+VSW+S+IS+Y   G+ ++A+ +F EM + G   N Y   A ++AC ++    +G
Sbjct: 72  NERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLG 131

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+  +LK      DV V  AL+ M V+    +  A ++FD++ EK+ + W  MI   T
Sbjct: 132 MEIHAAILKSNQV-LDVYVANALVAMHVRFG-KMSYAARIFDELDEKDNITWNSMIAGFT 189

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q G   +A++ F  +  +   PD  +L  +++A   L    +GK++H++A++  L  ++ 
Sbjct: 190 QNGLYNEALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMKNWLDSNLR 249

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +G +L+DMY+KC     V  +  VFD+M++ +++SWT +I  Y Q+     EA+KL   +
Sbjct: 250 IGNTLIDMYSKCCC---VAYAGLVFDKMINKDLISWTTVIAAYAQNNCH-TEALKLLRKV 305

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               +  +     S L AC  L   + A++V+ + +KRG + D  + N +I +YA  G +
Sbjct: 306 QTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADCGNI 364

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             A + FES+  K++VS+ +M+  Y  N  + +A  + + +++T V   + T  S+LS A
Sbjct: 365 NYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPDSITLVSILSAA 424

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +S+ A+ KG++IH  I + GF       N+L+ MY+ C ++E A++VF     ++++ WT
Sbjct: 425 ASLSALNKGKEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWT 484

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI  +  HG    A+E+F  M    + P+ IT++A+L ACSH+GLI+EG +   +M  +
Sbjct: 485 TMINAYGMHGRGKAAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCK 544

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           + +    EHYAC+VDLLGR+  L EA  F++SM +     VW  FLGACR+H + +LG+ 
Sbjct: 545 YQLEPWPEHYACLVDLLGRANHLEEAYHFVKSMQIEPTAEVWCAFLGACRIHSNKKLGEI 604

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AA+ +L+ DP  P +++L+SN++A++G W+ V  +R RMK   L K  GCSWIE  NKVH
Sbjct: 605 AAQKLLDLDPDSPGSYVLISNVFAASGRWKDVEEVRMRMKGGGLKKNPGCSWIEVGNKVH 664

Query: 740 KFHVGETSHPKTLEIYAELDQLALKI-KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
            F V + SHP++ +IY +L Q+  K+ KE GY+P T  VLH + +E+KVQ L+ HSE++A
Sbjct: 665 TFLVRDKSHPESYKIYQKLAQITEKLEKEGGYVPQTKLVLHNVGKEEKVQMLYGHSERLA 724

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           +A+GL+STS+  PIR+ KNLRVC DCHT  K +S    RE+++RD++RFHH +DG CSC 
Sbjct: 725 IAYGLMSTSEGTPIRITKNLRVCVDCHTFCKLVSKFFERELIVRDASRFHHFEDGVCSCG 784

Query: 859 DYW 861
           D+W
Sbjct: 785 DFW 787



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 153/539 (28%), Positives = 285/539 (52%), Gaps = 17/539 (3%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M  LG   + + F  V++AC   E++  G  I+G ++KCGY DS V V  +L+ M+ K +
Sbjct: 1   MRVLGVPFDSFTFPCVLKACGVVEDIHRGAEIHGLIIKCGY-DSIVFVANSLVSMYAKCN 59

Query: 231 VDLESAYKVFDKMTEKN-TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            D+  A K+FD+M E+N  V W  +I+  +  G   +A+ LF +M  +G   + +TL   
Sbjct: 60  -DILGARKLFDRMNERNDVVSWNSIISAYSLNGQCMEALGLFREMQKAGVGANTYTLVAA 118

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + AC +      G ++H+  +++   LDV V  +LV M+ +    G +  + ++FD + +
Sbjct: 119 LQACEDSSFKKLGMEIHAAILKSNQVLDVYVANALVAMHVRF---GKMSYAARIFDELDE 175

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            + ++W ++I G+ Q+G  + EA++ F  +    + P+  +  S+L A G L      ++
Sbjct: 176 KDNITWNSMIAGFTQNGLYN-EALQFFCGLQDANLKPDEVSLISILAASGRLGYLLNGKE 234

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++ +A+K     +  +GN+LI MY++   +  A   F+ +  K+L+S+ T++ AYA+N  
Sbjct: 235 IHAYAMKNWLDSNLRIGNTLIDMYSKCCCVAYAGLVFDKMINKDLISWTTVIAAYAQNNC 294

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A +LL +++  G+        S L   S +  +   +++H   +K G  S+  + N 
Sbjct: 295 HTEALKLLRKVQTKGMDVDTMMIGSTLLACSGLRCLSHAKEVHGYTLKRGL-SDLMMQNM 353

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           +I +Y+ C N+  A ++F+ ++ ++V+SWTSMI+ +  +G A  AL +FY M    ++P+
Sbjct: 354 IIDVYADCGNINYATRMFESIKCKDVVSWTSMISCYVHNGLANEALGVFYLMKETSVEPD 413

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE-F 648
            IT +++LSA +    +++G K         G +        +VD+    GSL  A + F
Sbjct: 414 SITLVSILSAAASLSALNKG-KEIHGFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVF 472

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM--ILEQDPQDPAAHILLSNLYASA 705
           I +   S  +++W T + A  +HG    GK A E+  I+E     P     L+ LYA +
Sbjct: 473 ICTR--SKSLVLWTTMINAYGMHGR---GKAAVELFSIMEDQKLIPDHITFLALLYACS 526



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 136/501 (27%), Positives = 257/501 (51%), Gaps = 10/501 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G+  +A+     M + G   +  T    L++C  S    LG  +H+ + +S    
Sbjct: 87  YSLN-GQCMEALGLFREMQKAGVGANTYTLVAALQACEDSSFKKLGMEIHAAILKSNQVL 145

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  + N+L++++ + G ++ A +IF  + +++D ++W+SMI+ +   G   +A+  F  +
Sbjct: 146 DVYVANALVAMHVRFGKMSYAARIFDEL-DEKDNITWNSMIAGFTQNGLYNEALQFFCGL 204

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            +    P+E    +++ A      +  G  I+ + +K  + DS++ +G  LIDM+ K   
Sbjct: 205 QDANLKPDEVSLISILAASGRLGYLLNGKEIHAYAMK-NWLDSNLRIGNTLIDMYSKCCC 263

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +  A  VFDKM  K+ + WT +I    Q  C  +A++L   +   G   D   +   + 
Sbjct: 264 -VAYAGLVFDKMINKDLISWTTVIAAYAQNNCHTEALKLLRKVQTKGMDVDTMMIGSTLL 322

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L   +  K++H + ++ GL+ D+ +   ++D+YA C   G+++ + ++F+ +   +
Sbjct: 323 ACSGLRCLSHAKEVHGYTLKRGLS-DLMMQNMIIDVYADC---GNINYATRMFESIKCKD 378

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT++I+ YV +G  + EA+ +F  M +  V P+  T  S+L A  +L   N  ++++
Sbjct: 379 VVSWTSMISCYVHNGLAN-EALGVFYLMKETSVEPDSITLVSILSAAASLSALNKGKEIH 437

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
               ++G  L+    NSL+ MYA  G +E+A K F     K+LV + TM++AY  +   +
Sbjct: 438 GFIFRKGFMLEGSTVNSLVDMYACCGSLENAYKVFICTRSKSLVLWTTMINAYGMHGRGK 497

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNAL 530
            A EL   +ED  +     TF +LL   S  G I +G+++   +  K   E     Y  L
Sbjct: 498 AAVELFSIMEDQKLIPDHITFLALLYACSHSGLINEGKRLLETMKCKYQLEPWPEHYACL 557

Query: 531 ISMYSRCANVEAAFQVFKEME 551
           + +  R  ++E A+   K M+
Sbjct: 558 VDLLGRANHLEEAYHFVKSMQ 578


>gi|225464633|ref|XP_002274427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic [Vitis vinifera]
 gi|302143764|emb|CBI22625.3| unnamed protein product [Vitis vinifera]
          Length = 880

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 295/805 (36%), Positives = 461/805 (57%), Gaps = 19/805 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+   D M   G +P+  T S  L+SC   R F+ G    +L+T+S  + N V+ 
Sbjct: 95  GNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLG 154

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++LI  YSKCG   EA ++F+ M N  DIVSW+ M+SS+V  G    A+ ++  M++ G 
Sbjct: 155 SALIDFYSKCGCTQEAYRVFEYMNNG-DIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGV 213

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PNE+ F  ++ A S+   +  G +++  L+     + ++ +  AL+DM+ K    +E A
Sbjct: 214 APNEFTFVKLL-AASSFLGLNYGKLVHAHLMMW-RIELNLVLKTALVDMYCKCQ-SIEDA 270

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            KV     E +   WT +I+  TQ    R+AI  F +M  SG +P+ FT SG+++ACS +
Sbjct: 271 VKVSKLTLEYDVFLWTAIISGFTQSLKFREAITAFHEMETSGVVPNNFTYSGILNACSSI 330

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GKQ+HS  +  GL  DV VG SLVDMY KC+    ++D+ + F  +   NV+SWT
Sbjct: 331 LALDLGKQIHSRVVMAGLENDVSVGNSLVDMYMKCS--NMIEDAVRAFRGIASPNVISWT 388

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++I G+ + G  ++E++K+F  M    V PN FT +++L ACG +       +++ + +K
Sbjct: 389 SLIAGFSEHG-LEEESIKVFGAMQGVGVRPNSFTLSTILGACGTIKSLTQTRKLHGYIIK 447

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                D  VGN+L+  YA  G ++DA      +  +++++Y ++     +  N E A  +
Sbjct: 448 NNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKHRDVITYTSLATRINQTGNHEMALNI 507

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
           +  +    V    ++ AS LS A+ I  +  G+Q+H   +KSG  S   + N L+ +Y +
Sbjct: 508 ITHMNKDDVRMDGFSLASFLSAAAGIPIMETGKQLHCYSVKSGLGSWISVSNGLVDLYGK 567

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  +  A + F E+ + + +SW  +I G A +G  + AL  F  M   G++P+ IT + V
Sbjct: 568 CGCIHDAHRSFLEITEPDAVSWNGLIFGLASNGHVSSALSAFEDMRLAGVEPDQITCLLV 627

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L ACSH GL+  G  +F+SM ++HGI  +++HY C+VDLLGR+G L EA+  I +MP   
Sbjct: 628 LYACSHGGLVDMGLDYFQSMREKHGIRPQLDHYVCLVDLLGRAGRLEEAMNVIETMPFKP 687

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D L+++T LGAC++HG+  LG+H A   LE DP DPA ++LL+NLY  +G  E     R+
Sbjct: 688 DALIYKTLLGACKLHGNIPLGEHMARQGLELDPSDPAFYVLLANLYDDSGRSELGEKTRR 747

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M+ER + K  G SW+E  N VH F  G+TSHP+  +I+ +++ L  + +  G     N 
Sbjct: 748 MMRERGVRKNPGQSWMEERNMVHLFTAGDTSHPQIGKIHEKIESLIAQFRNQGIWYQEN- 806

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
                      + L  HSEK+AVAFGLIST    PIR+ KN+R+C DCH  I  ++ +  
Sbjct: 807 -----------RALAHHSEKLAVAFGLISTPPKAPIRIIKNIRICRDCHDFIMNVTRLVD 855

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REI++RD NRFH  K G+CSC  YW
Sbjct: 856 REIIVRDGNRFHSFKKGECSCRGYW 880



 Score =  281 bits (720), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 176/573 (30%), Positives = 313/573 (54%), Gaps = 12/573 (2%)

Query: 76  PDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           P    YSLL  + S   SR+   G  +HS + +   + +  + N+L+SLY KC  + EA 
Sbjct: 11  PSKIEYSLLKDIVSFCNSRSVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEAR 70

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F  M   RD+ SW+ ++S+Y   G   +A+ +F  ML  G  PNE+  S  +R+CS  
Sbjct: 71  QLFDEM-PCRDVASWTMLMSAYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSAL 129

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
                G      + K G FDS+  +G ALID + K     E AY+VF+ M   + V WT+
Sbjct: 130 REFNHGTRFQALVTKSG-FDSNPVLGSALIDFYSKCGCTQE-AYRVFEYMNNGDIVSWTM 187

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           M++   + G    A++L+  MI +G  P+ FT   +++A S L L   GK +H+  +   
Sbjct: 188 MVSSFVEAGSWSQALQLYHRMIQTGVAPNEFTFVKLLAASSFLGL-NYGKLVHAHLMMWR 246

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
           + L++ +  +LVDMY KC    S++D+ KV    L+++V  WTAII+G+ QS  + +EA+
Sbjct: 247 IELNLVLKTALVDMYCKCQ---SIEDAVKVSKLTLEYDVFLWTAIISGFTQS-LKFREAI 302

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
             F +M    V PN+FT++ +L AC ++L  ++ +Q+++  V  G   D  VGNSL+ MY
Sbjct: 303 TAFHEMETSGVVPNNFTYSGILNACSSILALDLGKQIHSRVVMAGLENDVSVGNSLVDMY 362

Query: 434 ARSGRM-EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
            +   M EDA +AF  +   N++S+ +++  ++++   E++ ++   ++  GV  +++T 
Sbjct: 363 MKCSNMIEDAVRAFRGIASPNVISWTSLIAGFSEHGLEEESIKVFGAMQGVGVRPNSFTL 422

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +++L    +I ++ +  ++H  IIK+  +++  + NAL+  Y+    V+ A+ V   M+ 
Sbjct: 423 STILGACGTIKSLTQTRKLHGYIIKNNADNDVVVGNALVDAYAGLGMVDDAWHVTSMMKH 482

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           R+VI++TS+ T   + G    AL I   M  D ++ +G +  + LSA +   ++  G K 
Sbjct: 483 RDVITYTSLATRINQTGNHEMALNIITHMNKDDVRMDGFSLASFLSAAAGIPIMETG-KQ 541

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
                 + G+   +     +VDL G+ G + +A
Sbjct: 542 LHCYSVKSGLGSWISVSNGLVDLYGKCGCIHDA 574



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 70/260 (26%), Positives = 146/260 (56%), Gaps = 11/260 (4%)

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +++  +K G   D  + N+L+S+Y +   + +AR+ F+ +  +++ S+  ++ AY K  N
Sbjct: 37  IHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMSAYGKIGN 96

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E+A EL   +  +G   + +T ++ L   S++     G +  A + KSGF+SN  + +A
Sbjct: 97  HEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTRFQALVTKSGFDSNPVLGSA 156

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI  YS+C   + A++VF+ M + +++SWT M++ F + G  ++AL+++++M+  G+ PN
Sbjct: 157 LIDFYSKCGCTQEAYRVFEYMNNGDIVSWTMMVSSFVEAGSWSQALQLYHRMIQTGVAPN 216

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME----HYACMVDLLGRSGSLTEA 645
             T++ +L+A S  GL      ++  +   H ++ R+E        +VD+  +  S+ +A
Sbjct: 217 EFTFVKLLAASSFLGL------NYGKLVHAHLMMWRIELNLVLKTALVDMYCKCQSIEDA 270

Query: 646 LEFIRSMPLSADVLVWRTFL 665
           ++ +  + L  DV +W   +
Sbjct: 271 VK-VSKLTLEYDVFLWTAII 289



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 2/158 (1%)

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           ++  G  IH+ IIK GF+ +  + N L+S+Y +C  V  A Q+F EM  R+V SWT +++
Sbjct: 30  SVRDGICIHSPIIKMGFQEDMFLSNNLLSLYGKCFGVAEARQLFDEMPCRDVASWTMLMS 89

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
            + K G    ALE+F  ML  G  PN  T    L +CS     + G + F+++  + G  
Sbjct: 90  AYGKIGNHEEALELFDSMLISGEYPNEFTLSTALRSCSALREFNHGTR-FQALVTKSGFD 148

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
                 + ++D   + G   EA      M  + D++ W
Sbjct: 149 SNPVLGSALIDFYSKCGCTQEAYRVFEYMN-NGDIVSW 185


>gi|296085026|emb|CBI28441.3| unnamed protein product [Vitis vinifera]
          Length = 913

 Score =  552 bits (1423), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 334/883 (37%), Positives = 501/883 (56%), Gaps = 65/883 (7%)

Query: 31  SSSPPFIA-QPTTSEPLSNRLIYHLNDGRVQKAIFTL-DLMTQKGNHPDL------DTYS 82
           +S+P F     +   PL + L   LN  +  K++  L D      +H +       +T+ 
Sbjct: 44  NSTPTFTTFTASPFPPLKSLLFKPLNPNQCTKSLQDLVDHYKTSTSHCNTTLFSSSETFE 103

Query: 83  LLLK----SCI--RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
            L+     SC    +R  HL  + +  +       N  + N+LI++Y + GDL  A K+F
Sbjct: 104 SLINRYQGSCCSEEARELHLQSIKYGFVG------NLFLSNTLINIYVRIGDLGSAQKLF 157

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC--SNTE 194
             M N R++V+W+ +IS Y   GK  +A   F +M+  GF PN Y F + +RAC  S   
Sbjct: 158 DEMSN-RNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPS 216

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
              +G  I+G + K  Y  SDV V   LI M+         A  VFD +  +N++ W  +
Sbjct: 217 GCKLGVQIHGLISKTRY-GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSI 275

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL-FTSGKQLHSWAIRTG 313
           I+  ++ G    A  LF  M   G L   F  +   S  S LE     G+++H+  IRTG
Sbjct: 276 ISVYSRRGDAVSAYDLFSSMQKEG-LGFSFKPNDAFSEFSVLEEGRRKGREVHAHVIRTG 334

Query: 314 LALD-VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ-------- 364
           L  + V +G  LV+MYAK    G++ D+  VF+ M++ + +SW ++I+G  Q        
Sbjct: 335 LNDNKVAIGNGLVNMYAK---SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAA 391

Query: 365 -----------------------SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
                                  S     +AVK F  M++G    +  TF ++L A  +L
Sbjct: 392 EMFSLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSL 451

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTM 460
               V+ Q++   +K   + D  +GN+L+S Y + G M +  K F  + E ++ VS+N+M
Sbjct: 452 SLHEVSHQIHALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSM 511

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +  Y  N    KA +L+  +   G    ++TFA++LS  +S+  + +G ++HA  I++  
Sbjct: 512 ISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACL 571

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
           ES+  + +AL+ MYS+C  ++ A + F+ M  RNV SW SMI+G+A+HG   +AL++F +
Sbjct: 572 ESDVVVGSALVDMYSKCGRIDYASRFFELMPLRNVYSWNSMISGYARHGHGEKALKLFTR 631

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M+ DG  P+ +T++ VLSACSH G + EG++HF+SM + + +  R+EH++CMVDLLGR+G
Sbjct: 632 MMLDGQPPDHVTFVGVLSACSHVGFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAG 691

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGA-CRVHG-DTELGKHAAEMILEQDPQDPAAHILL 698
            L E  +FI SMP+  +VL+WRT LGA CR +G +TELG+ AAEM+LE +PQ+   ++LL
Sbjct: 692 KLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAEMLLELEPQNAVNYVLL 751

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           +N+YAS   WE VA  R  MKE  + KEAGCSW+   + VH F  G+  HP+   IY +L
Sbjct: 752 ANMYASGEKWEDVAKARTAMKEAAVKKEAGCSWVTMKDGVHVFVAGDKLHPEKDLIYDKL 811

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
            +L  K+++ GY+P T + L +LE E K + L  HSEKIAVAF L   S + PIR+ KNL
Sbjct: 812 RELNRKMRDAGYIPQTKYALFDLELENKEELLSYHSEKIAVAFVLTRQS-ALPIRIMKNL 870

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RVCGDCH+A  YIS + GR+IVLRDSNRFHH +DGKCSC DYW
Sbjct: 871 RVCGDCHSAFGYISKIVGRQIVLRDSNRFHHFEDGKCSCGDYW 913


>gi|297738694|emb|CBI27939.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  551 bits (1421), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 281/752 (37%), Positives = 458/752 (60%), Gaps = 10/752 (1%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P+S + +SL+++Y KC  L  A ++ + M   +D+  W+  +SS  +     +A+ +F  
Sbjct: 22  PDSHLWSSLVNVYVKCESLQCARQVLEEMP-IQDVQQWNQKLSSANSPYPLQEAVQLFYL 80

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M       N++ F+++I A ++  +   G  I+  + K G F+SD+ +  A + M++K +
Sbjct: 81  MRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYG-FESDILISNAFVTMYMK-T 138

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITR-CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             +E+ ++ F  M  +N      +++  C    C +   R+ + +++ GF P+ +T   +
Sbjct: 139 QSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGP-RILIQLLVEGFEPNMYTFISI 197

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +  C+       GK +H   I++G+  D  +  SLV++YAKC   GS + + KVF  + +
Sbjct: 198 LKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKC---GSANYACKVFGEIPE 254

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWTA+ITG+V  G      +++F+ M+     PN +TF S+L++C +L D ++ +Q
Sbjct: 255 RDVVSWTALITGFVAEG--YGSGLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLGKQ 312

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+   VK     +D VG +L+ MYA++  +EDA   F  L +++L ++  +V  YA++  
Sbjct: 313 VHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDAETIFNRLIKRDLFAWTVIVAGYAQDGQ 372

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            EKA +   +++  GV  + +T AS LSG S I  +  G Q+H+  IK+G   +  + +A
Sbjct: 373 GEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKAGQSGDMFVASA 432

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L+ MY++C  VE A  VF  +  R+ +SW ++I G+++HG   +AL+ F  ML +G  P+
Sbjct: 433 LVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPD 492

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T+I VLSACSH GLI EG KHF S+   +GI   +EHYACMVD+LGR+G   E   FI
Sbjct: 493 EVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGRAGKFHEVESFI 552

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
             M L+++VL+W T LGAC++HG+ E G+ AA  + E +P+  + +ILLSN++A+ G W+
Sbjct: 553 EEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPEIDSNYILLSNMFAAKGMWD 612

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V N+R  M  R + KE GCSW+E + +VH F   + SHPK  EI+ +L  L  K+   G
Sbjct: 613 DVTNVRALMSTRGVKKEPGCSWVEVNGQVHVFLSHDGSHPKIREIHLKLQDLHQKLMSVG 672

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y P+T+ VLH + + +K + LF HSE++A+AF L+STS  K IR+FKNLR+CGDCH  +K
Sbjct: 673 YTPNTDHVLHNVSDREKQELLFYHSERLALAFALLSTSTRKTIRIFKNLRICGDCHDFMK 732

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IS +T +E+V+RD N FHH K+G CSC ++W
Sbjct: 733 SISEITNQELVVRDINCFHHFKNGSCSCQNFW 764



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 233/422 (55%), Gaps = 23/422 (5%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           +G  P++ T+  +LK+C    + + GK +H  + +S + P+S + NSL+++Y+KCG  N 
Sbjct: 185 EGFEPNMYTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANY 244

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A K+F  +  +RD+VSW+++I+ +V  G     + +F +ML  GF PN Y F +++R+CS
Sbjct: 245 ACKVFGEIP-ERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCS 302

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
           +  +V +G  ++  ++K    D +  VG AL+DM+ K    LE A  +F+++ +++   W
Sbjct: 303 SLSDVDLGKQVHAQIVK-NSLDGNDFVGTALVDMYAKNRF-LEDAETIFNRLIKRDLFAW 360

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
           T+++    Q G    A++ F+ M   G  P+ FTL+  +S CS +    SG+QLHS AI+
Sbjct: 361 TVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIK 420

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            G + D+ V  +LVDMYAKC   G V+D+  VFD ++  + +SW  II GY Q G   K 
Sbjct: 421 AGQSGDMFVASALVDMYAKC---GCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGK- 476

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH--AVKRGRALDDCVGN-- 427
           A+K F  M+     P+  TF  VL AC ++    + E+   H  ++ +   +   + +  
Sbjct: 477 ALKAFEAMLDEGTVPDEVTFIGVLSACSHM---GLIEEGKKHFNSLSKIYGITPTIEHYA 533

Query: 428 SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE-------KAFELLHE 479
            ++ +  R+G+  +     E +    N++ + T++ A   + N E       K FEL  E
Sbjct: 534 CMVDILGRAGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERAAMKLFELEPE 593

Query: 480 IE 481
           I+
Sbjct: 594 ID 595



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 143/522 (27%), Positives = 269/522 (51%), Gaps = 15/522 (2%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           +Q+A+    LM       +   ++ L+ +     + H G+ +H+ + +   E + +I N+
Sbjct: 71  LQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNA 130

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
            +++Y K   +    + FK+M    ++ S ++++S + +         + +++L  GF P
Sbjct: 131 FVTMYMKTQSVENGWQFFKAM-MIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEP 189

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           N Y F ++++ C++  ++  G  I+G ++K G  + D  +  +L++++ K GS +   A 
Sbjct: 190 NMYTFISILKTCASKGDLNEGKAIHGQVIKSG-INPDSHLWNSLVNVYAKCGSANY--AC 246

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           KVF ++ E++ V WT +IT     G     +R+F  M+  GF P+ +T   ++ +CS L 
Sbjct: 247 KVFGEIPERDVVSWTALITGFVAEGYG-SGLRIFNQMLAEGFNPNMYTFISILRSCSSLS 305

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               GKQ+H+  ++  L  +  VG +LVDMYAK   +  ++D+  +F+R++  ++ +WT 
Sbjct: 306 DVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAK---NRFLEDAETIFNRLIKRDLFAWTV 362

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           I+ GY Q G  +K AVK F  M +  V PN FT AS L  C  +   +   Q+++ A+K 
Sbjct: 363 IVAGYAQDGQGEK-AVKCFIQMQREGVKPNEFTLASSLSGCSRIATLDSGRQLHSMAIKA 421

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G++ D  V ++L+ MYA+ G +EDA   F+ L  ++ VS+NT++  Y+++    KA +  
Sbjct: 422 GQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVSRDTVSWNTIICGYSQHGQGGKALKAF 481

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSR 536
             + D G      TF  +LS  S +G I +G++    + K  G       Y  ++ +  R
Sbjct: 482 EAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNSLSKIYGITPTIEHYACMVDILGR 541

Query: 537 CANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARA 574
                      +EM+   NV+ W +++     HG   F  RA
Sbjct: 542 AGKFHEVESFIEEMKLTSNVLIWETVLGACKMHGNIEFGERA 583



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/366 (28%), Positives = 194/366 (53%), Gaps = 7/366 (1%)

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I+ G+  D  +  SLV++Y KC    S+  +R+V + M   +V  W   ++    S    
Sbjct: 16  IKNGICPDSHLWSSLVNVYVKCE---SLQCARQVLEEMPIQDVQQWNQKLSS-ANSPYPL 71

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           +EAV+LF  M   ++  N F FAS++ A  +L D++  E ++    K G   D  + N+ 
Sbjct: 72  QEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDILISNAF 131

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           ++MY ++  +E+  + F+++  +NL S N ++  +      ++   +L ++   G   + 
Sbjct: 132 VTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEGFEPNM 191

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           YTF S+L   +S G + +G+ IH ++IKSG   +  ++N+L+++Y++C +   A +VF E
Sbjct: 192 YTFISILKTCASKGDLNEGKAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYACKVFGE 251

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           + +R+V+SWT++ITGF   G+ +  L IF +MLA+G  PN  T+I++L +CS    +  G
Sbjct: 252 IPERDVVSWTALITGFVAEGYGS-GLRIFNQMLAEGFNPNMYTFISILRSCSSLSDVDLG 310

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
            K   +   ++ +         +VD+  ++  L +A E I +  +  D+  W   +    
Sbjct: 311 -KQVHAQIVKNSLDGNDFVGTALVDMYAKNRFLEDA-ETIFNRLIKRDLFAWTVIVAGYA 368

Query: 670 VHGDTE 675
             G  E
Sbjct: 369 QDGQGE 374



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 180/357 (50%), Gaps = 18/357 (5%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G +P++ T+  +L+SC    +  LGK VH+ + ++ L+ N  +  +L+ +Y+K   
Sbjct: 282 MLAEGFNPNMYTFISILRSCSSLSDVDLGKQVHAQIVKNSLDGNDFVGTALVDMYAKNRF 341

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L +A  IF  +  KRD+ +W+ +++ Y   G+   A+  F++M   G  PNE+  ++ + 
Sbjct: 342 LEDAETIFNRL-IKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLS 400

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            CS    +  G  ++   +K G    D+ V  AL+DM+ K    +E A  VFD +  ++T
Sbjct: 401 GCSRIATLDSGRQLHSMAIKAGQ-SGDMFVASALVDMYAKCGC-VEDAEVVFDGLVSRDT 458

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ-LHS 307
           V W  +I   +Q G    A++ F  M+  G +PD  T  GV+SACS + L   GK+  +S
Sbjct: 459 VSWNTIICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSHMGLIEEGKKHFNS 518

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIIT-----G 361
            +   G+   +     +VD+  +    G   +     + M L  NV+ W  ++      G
Sbjct: 519 LSKIYGITPTIEHYACMVDILGRA---GKFHEVESFIEEMKLTSNVLIWETVLGACKMHG 575

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD-SNVAEQVYTHAVKR 417
            ++ G  ++ A+KLF   ++ ++  N+   +++  A G   D +NV   + T  VK+
Sbjct: 576 NIEFG--ERAAMKLFE--LEPEIDSNYILLSNMFAAKGMWDDVTNVRALMSTRGVKK 628



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 69/260 (26%), Positives = 134/260 (51%), Gaps = 2/260 (0%)

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           + +++    +K G   D  + +SL+++Y +   ++ AR+  E +  +++  +N  + +  
Sbjct: 7   ILKKIIFRVIKNGICPDSHLWSSLVNVYVKCESLQCARQVLEEMPIQDVQQWNQKLSSAN 66

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
                ++A +L + +  T +  + + FASL+S A+S+G    GE IHA + K GFES+  
Sbjct: 67  SPYPLQEAVQLFYLMRHTRIRLNQFIFASLISAAASLGDNHYGESIHACVCKYGFESDIL 126

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           I NA ++MY +  +VE  +Q FK M   N+ S  ++++GF       +   I  ++L +G
Sbjct: 127 ISNAFVTMYMKTQSVENGWQFFKAMMIENLASRNNLLSGFCDTETCDQGPRILIQLLVEG 186

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
            +PN  T+I++L  C+  G ++EG K       + GI      +  +V++  + GS   A
Sbjct: 187 FEPNMYTFISILKTCASKGDLNEG-KAIHGQVIKSGINPDSHLWNSLVNVYAKCGSANYA 245

Query: 646 LEFIRSMPLSADVLVWRTFL 665
            +    +P   DV+ W   +
Sbjct: 246 CKVFGEIP-ERDVVSWTALI 264



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 46/162 (28%), Positives = 82/162 (50%), Gaps = 13/162 (8%)

Query: 43  SEPLSNRLIY------------HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR 90
           +E + NRLI             +  DG+ +KA+     M ++G  P+  T +  L  C R
Sbjct: 345 AETIFNRLIKRDLFAWTVIVAGYAQDGQGEKAVKCFIQMQREGVKPNEFTLASSLSGCSR 404

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
                 G+ +HS+  ++    +  + ++L+ +Y+KCG + +A  +F  + + RD VSW++
Sbjct: 405 IATLDSGRQLHSMAIKAGQSGDMFVASALVDMYAKCGCVEDAEVVFDGLVS-RDTVSWNT 463

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
           +I  Y   G+   A+  F  ML+ G  P+E  F  V+ ACS+
Sbjct: 464 IICGYSQHGQGGKALKAFEAMLDEGTVPDEVTFIGVLSACSH 505


>gi|357465899|ref|XP_003603234.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492282|gb|AES73485.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 973

 Score =  551 bits (1420), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 290/769 (37%), Positives = 457/769 (59%), Gaps = 16/769 (2%)

Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-------RDIVSWSSMISS 154
           S   RS L P+ V + +++    K        +  ++   K        D+  W+  +SS
Sbjct: 212 SAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATKLFVCDDDSDVTVWNKTLSS 271

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y+  G+  +A+  F +M++     +   +  ++   ++  ++ +G  I+G +++ G+ D 
Sbjct: 272 YLQAGEGWEAVDCFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGW-DQ 330

Query: 215 DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
            V V  + I+M+VK GSV+   A ++F +M E + + W  +I+ C + G    ++RLF+D
Sbjct: 331 FVSVANSAINMYVKAGSVNY--ARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFID 388

Query: 274 MILSGFLPDRFTLSGVVSACSELE-LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           ++ SG LPD+FT++ V+ ACS LE  +  G+Q+H+ A++ G+ LD  V  +L+D+Y+K  
Sbjct: 389 LLRSGLLPDQFTITSVLRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSK-- 446

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G ++++  +F      ++ SW A++ G+  S    +EA++LFS M +     +  TFA
Sbjct: 447 -GGKMEEAELLFHNQDGFDLASWNAMMHGFTVSDNY-REALRLFSLMHERGEKADQITFA 504

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           +  KA G L+     +Q++   +K     D  V + ++ MY + G M+ ARK F  +   
Sbjct: 505 NAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIPSP 564

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           + V++ T++    +N   E+A    H++   GV    YTFA+L+   S + A+ +G+QIH
Sbjct: 565 DDVAWTTVISGCVENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIH 624

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           A I+K     +  +  +L+ MY++C N+E A+ +F+ M  R+V  W +MI G A+HG A 
Sbjct: 625 ANIMKLNCAFDPFVMTSLVDMYAKCGNIEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAE 684

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            AL  F +M + G+ P+ +T+I VLSACSH+GL S+ +K+F SM   +G+   +EHY+C+
Sbjct: 685 EALNFFNEMKSRGVTPDRVTFIGVLSACSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCL 744

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           VD L R+G + EA + + SMP  A   ++RT L ACRV GD E G+  AE +   DP D 
Sbjct: 745 VDALSRAGHIQEAEKVVSSMPFEASATMYRTLLNACRVQGDKETGERVAEKLFTMDPSDS 804

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
           AA++LLSN+YA+A  WE   + R  MK  N+ KE G SWI+  NKVH F  G+ SH +T 
Sbjct: 805 AAYVLLSNIYAAANQWENAVSARNMMKRVNVKKEPGFSWIDMKNKVHLFVAGDRSHEETD 864

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
            IY +++ +  +IKE GY+PDT F L ++EEE K   L  HSEK+A+A+GL+ T  S  +
Sbjct: 865 LIYNKVEYVMKRIKEEGYVPDTEFALVDIEEEDKESALSYHSEKLAIAYGLMKTPPSTTL 924

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RV KNLRVCGDCH AIKYIS V  REIVLRD+NRFHH + G CSC DYW
Sbjct: 925 RVIKNLRVCGDCHNAIKYISNVFQREIVLRDANRFHHFRSGICSCGDYW 973



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 242/473 (51%), Gaps = 9/473 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TY ++L       +  LGK +H  + R   +    + NS I++Y K G +N A ++F  M
Sbjct: 299 TYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVKAGSVNYARRMFGQM 358

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN-TENVAI 198
             + D++SW+++IS     G +  ++ +F+++L  G  P+++  ++V+RACS+  E+  +
Sbjct: 359 -KEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSVLRACSSLEESYCV 417

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  ++   LK G    D  V  ALID++ KG   +E A  +F      +   W  M+   
Sbjct: 418 GRQVHTCALKAGIV-LDSFVSTALIDVYSKGG-KMEEAELLFHNQDGFDLASWNAMMHGF 475

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           T     R+A+RLF  M   G   D+ T +    A   L     GKQ+H+  I+     D+
Sbjct: 476 TVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDL 535

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            V   ++DMY KC   G +  +RKVF+++   + ++WT +I+G V++ G +++A+  +  
Sbjct: 536 FVISGILDMYLKC---GEMKSARKVFNQIPSPDDVAWTTVISGCVEN-GEEEQALFTYHQ 591

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    V P+ +TFA+++KAC  L      +Q++ + +K   A D  V  SL+ MYA+ G 
Sbjct: 592 MRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDPFVMTSLVDMYAKCGN 651

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +EDA   F  +  +++  +N M+   A++ N+E+A    +E++  GV     TF  +LS 
Sbjct: 652 IEDAYGLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSA 711

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            S  G      +    + K+ G E     Y+ L+   SR  +++ A +V   M
Sbjct: 712 CSHSGLTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRAGHIQEAEKVVSSM 764



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 151/607 (24%), Positives = 283/607 (46%), Gaps = 57/607 (9%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK-SMGNK 142
           +L+  I   +  LGK  H+++  S L P+  + N+LI++Y+KCG L  A K+F  +  + 
Sbjct: 19  ILRHAIADSDLILGKRTHAVIVTSGLNPDRYVTNNLITMYAKCGSLFSARKLFDITPQSD 78

Query: 143 RDIVSWSSMISSYVNRG------KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
           RD+V++++++++Y + G      K  +A H+F  + +       +  S + + C    + 
Sbjct: 79  RDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLLYGSP 138

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
           +    + G+ +K G    DV V  AL++++ K    +  A  +FD+M  ++ V W +M+ 
Sbjct: 139 SASEALQGYAVKIG-LQWDVFVAGALVNIYAKFQ-RIREARVLFDRMPVRDVVLWNVMMK 196

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLA 315
              ++G   + + LF     SG  PD  ++  ++    +  +F    +Q+ ++A +    
Sbjct: 197 AYVEMGAGDEVLGLFSAFHRSGLRPDCVSVRTILMGVGKKTVFERELEQVRAYATK---- 252

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           L VC                  DD         D +V  W   ++ Y+Q+ G   EAV  
Sbjct: 253 LFVC------------------DD---------DSDVTVWNKTLSSYLQA-GEGWEAVDC 284

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F DMI+ +V  +  T+  +L    +L    + +Q++   V+ G      V NS I+MY +
Sbjct: 285 FRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYVK 344

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
           +G +  AR+ F  + E +L+S+NT++   A++   E +  L  ++  +G+    +T  S+
Sbjct: 345 AGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITSV 404

Query: 496 LSGASSI-GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           L   SS+  +   G Q+H   +K+G   +  +  ALI +YS+   +E A  +F   +  +
Sbjct: 405 LRACSSLEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEAELLFHNQDGFD 464

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           + SW +M+ GF        AL +F  M   G K + IT+     A      + +G +   
Sbjct: 465 LASWNAMMHGFTVSDNYREALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQI-- 522

Query: 615 SMYDEHGIVQRME-HYACMV-----DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
                H +V +M  HY   V     D+  + G +  A +    +P S D + W T +  C
Sbjct: 523 -----HAVVIKMRFHYDLFVISGILDMYLKCGEMKSARKVFNQIP-SPDDVAWTTVISGC 576

Query: 669 RVHGDTE 675
             +G+ E
Sbjct: 577 VENGEEE 583



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 113/473 (23%), Positives = 221/473 (46%), Gaps = 49/473 (10%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD-- 241
           +++R      ++ +G   +  ++  G  + D  V   LI M+ K GS  L SA K+FD  
Sbjct: 18  SILRHAIADSDLILGKRTHAVIVTSG-LNPDRYVTNNLITMYAKCGS--LFSARKLFDIT 74

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRD------AIRLFLDMILSGFLPDRFTLSGVVSACSE 295
             ++++ V +  ++      G   D      A  +F  +  S  L  R TLS +   C  
Sbjct: 75  PQSDRDLVTYNAILAAYAHTGELHDVEKTHEAFHIFRLLRQSVMLTTRHTLSPLFKLCLL 134

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
               ++ + L  +A++ GL  DV V  +LV++YAK      + ++R +FDRM   +V+ W
Sbjct: 135 YGSPSASEALQGYAVKIGLQWDVFVAGALVNIYAKFQ---RIREARVLFDRMPVRDVVLW 191

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
             ++  YV+ G  D E + LFS   +  + P+  +  ++L   G        + V+   +
Sbjct: 192 NVMMKAYVEMGAGD-EVLGLFSAFHRSGLRPDCVSVRTILMGVGK-------KTVFEREL 243

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           ++ RA                     A K F    + ++  +N  + +Y +     +A +
Sbjct: 244 EQVRAY--------------------ATKLFVCDDDSDVTVWNKTLSSYLQAGEGWEAVD 283

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
              ++  + V   + T+  +LS  +S+  +  G+QIH  +++ G++    + N+ I+MY 
Sbjct: 284 CFRDMIKSRVPCDSLTYIVILSVVASLNHLELGKQIHGAVVRFGWDQFVSVANSAINMYV 343

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +  +V  A ++F +M++ ++ISW ++I+G A+ G    +L +F  +L  G+ P+  T  +
Sbjct: 344 KAGSVNYARRMFGQMKEVDLISWNTVISGCARSGLEECSLRLFIDLLRSGLLPDQFTITS 403

Query: 596 VLSACSHAGLISEGWKHFRSMYD---EHGIVQRMEHYACMVDLLGRSGSLTEA 645
           VL ACS    + E +   R ++    + GIV        ++D+  + G + EA
Sbjct: 404 VLRACSS---LEESYCVGRQVHTCALKAGIVLDSFVSTALIDVYSKGGKMEEA 453



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 79/291 (27%), Positives = 146/291 (50%), Gaps = 11/291 (3%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++A+    LM ++G   D  T++   K+         GK +H+++ + +   +  +++ +
Sbjct: 482 REALRLFSLMHERGEKADQITFANAAKAAGCLVRLQQGKQIHAVVIKMRFHYDLFVISGI 541

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + +Y KCG++  A K+F  + +  D V+W+++IS  V  G++  A+  + +M   G  P+
Sbjct: 542 LDMYLKCGEMKSARKVFNQIPSPDD-VAWTTVISGCVENGEEEQALFTYHQMRLAGVQPD 600

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           EY F+ +++ACS    +  G  I+  ++K  C +   D  V  +L+DM+ K   ++E AY
Sbjct: 601 EYTFATLVKACSLLTALEQGKQIHANIMKLNCAF---DPFVMTSLVDMYAKCG-NIEDAY 656

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
            +F +M  ++   W  MI    Q G   +A+  F +M   G  PDR T  GV+SACS   
Sbjct: 657 GLFRRMNTRSVALWNAMIVGLAQHGNAEEALNFFNEMKSRGVTPDRVTFIGVLSACSHSG 716

Query: 298 LFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           L +   K   S     G+  ++     LVD  ++    G + ++ KV   M
Sbjct: 717 LTSDAYKNFDSMQKTYGVEPEIEHYSCLVDALSRA---GHIQEAEKVVSSM 764



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 1/140 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G  ++A+FT   M   G  PD  T++ L+K+C        GK +H+ + +     + 
Sbjct: 577 VENGEEEQALFTYHQMRLAGVQPDEYTFATLVKACSLLTALEQGKQIHANIMKLNCAFDP 636

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            ++ SL+ +Y+KCG++ +A  +F+ M N R +  W++MI      G   +A++ F EM  
Sbjct: 637 FVMTSLVDMYAKCGNIEDAYGLFRRM-NTRSVALWNAMIVGLAQHGNAEEALNFFNEMKS 695

Query: 174 LGFCPNEYCFSAVIRACSNT 193
            G  P+   F  V+ ACS++
Sbjct: 696 RGVTPDRVTFIGVLSACSHS 715


>gi|30694644|ref|NP_191302.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218525905|sp|Q7Y211.2|PP285_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g57430, chloroplastic; Flags: Precursor
 gi|332646133|gb|AEE79654.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 890

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 309/891 (34%), Positives = 514/891 (57%), Gaps = 40/891 (4%)

Query: 3   TLSLPA----PAKIPPPSSFK--------PSNPSRQNLPPSSSPP--FIAQPTTSEPLSN 48
           T SLP+    P+++ P S  K        P++ +       S  P  FI+Q  + E   +
Sbjct: 8   TFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWID 67

Query: 49  RLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
            L   +    +++A+ T   M   G  PD   +  LLK+    ++  LGK +H+ + +  
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 109 LEPNSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
              +SV + N+L++LY KCGD     K+F  + ++R+ VSW+S+ISS  +  K   A+  
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI-SERNQVSWNSLISSLCSFEKWEMALEA 186

Query: 168 FVEMLELGFCPNEYCFSAVIRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           F  ML+    P+ +   +V+ ACSN    E + +G  ++ + L+ G  +S +     L+ 
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVA 244

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K    L S+  +      ++ V W  +++   Q     +A+    +M+L G  PD F
Sbjct: 245 MYGKLG-KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           T+S V+ ACS LE+  +GK+LH++A++ G L  +  VG +LVDMY  C     V   R+V
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK---QVLSGRRV 360

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLL 402
           FD M D  +  W A+I GY Q+   DKEA+ LF  M +   +  N  T A V+ AC    
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNE-HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
             +  E ++   VKRG   D  V N+L+ MY+R G+++ A + F  + +++LV++NTM+ 
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479

Query: 463 AYAKNLNSEKAFELLHEIED-----------TGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            Y  + + E A  LLH++++             +  ++ T  ++L   +++ A+ KG++I
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA  IK+   ++  + +AL+ MY++C  ++ + +VF ++  +NVI+W  +I  +  HG  
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A+++   M+  G+KPN +T+I+V +ACSH+G++ EG + F  M  ++G+    +HYAC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           +VDLLGR+G + EA + +  MP   +    W + LGA R+H + E+G+ AA+ +++ +P 
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
             + ++LL+N+Y+SAG W+    +R+ MKE+ + KE GCSWIE  ++VHKF  G++SHP+
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + ++   L+ L  ++++ GY+PDT+ VLH +EE++K   L  HSEK+A+AFG+++TS   
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IRV KNLRVC DCH A K+IS +  REI+LRD  RFH  K+G CSC DYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>gi|30794008|gb|AAP40452.1| unknown protein [Arabidopsis thaliana]
          Length = 890

 Score =  551 bits (1419), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 309/891 (34%), Positives = 514/891 (57%), Gaps = 40/891 (4%)

Query: 3   TLSLPA----PAKIPPPSSFK--------PSNPSRQNLPPSSSPP--FIAQPTTSEPLSN 48
           T SLP+    P+++ P S  K        P++ +       S  P  FI+Q  + E   +
Sbjct: 8   TFSLPSIFPLPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWID 67

Query: 49  RLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
            L   +    +++A+ T   M   G  PD   +  LLK+    ++  LGK +H+ + +  
Sbjct: 68  LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127

Query: 109 LEPNSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
              +SV + N+L++LY KCGD     K+F  + ++R+ VSW+S+ISS  +  K   A+  
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI-SERNQVSWNSLISSLCSFEKWEMALEA 186

Query: 168 FVEMLELGFCPNEYCFSAVIRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           F  ML+    P+ +   +V+ ACSN    E + +G  ++ + L+ G  +S +     L+ 
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVA 244

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K    L S+  +      ++ V W  +++   Q     +A+    +M+L G  PD F
Sbjct: 245 MYGKLG-KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           T+S V+ ACS LE+  +GK+LH++A++ G L  +  VG +LVDMY  C     V   R+V
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK---QVLSGRRV 360

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLL 402
           FD M D  +  W A+I GY Q+   DKEA+ LF  M +   +  N  T A V+ AC    
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNE-HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
             +  E ++   VKRG   D  V N+L+ MY+R G+++ A + F  + +++LV++NTM+ 
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479

Query: 463 AYAKNLNSEKAFELLHEIED-----------TGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            Y  + + E A  LLH++++             +  ++ T  ++L   +++ A+ KG++I
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA  IK+   ++  + +AL+ MY++C  ++ + +VF ++  +NVI+W  +I  +  HG  
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A+++   M+  G+KPN +T+I+V +ACSH+G++ EG + F  M  ++G+    +HYAC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           +VDLLGR+G + EA + +  MP   +    W + LGA R+H + E+G+ AA+ +++ +P 
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
             + ++LL+N+Y+SAG W+    +R+ MKE+ + KE GCSWIE  ++VHKF  G++SHP+
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + ++   L+ L  ++++ GY+PDT+ VLH +EE++K   L  HSEK+A+AFG+++TS   
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IRV KNLRVC DCH A K+IS +  REI+LRD  RFH  K+G CSC DYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890


>gi|302770521|ref|XP_002968679.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
 gi|300163184|gb|EFJ29795.1| hypothetical protein SELMODRAFT_90123 [Selaginella moellendorffii]
          Length = 818

 Score =  550 bits (1418), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 302/827 (36%), Positives = 481/827 (58%), Gaps = 52/827 (6%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
            PD  T+  +L SC    +   G+ +H  +  S+ E ++++ N+LIS+Y KC  L +A  
Sbjct: 4   QPDNVTFLTVLCSCSSCGDVVEGRALHERIRCSRFERDTMVGNALISMYGKCDSLVDARS 63

Query: 135 IFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           +F+SM   +R++VSW++MI++Y   G   +A+ ++  M   G   +   F +V+ ACS+ 
Sbjct: 64  VFESMDWRQRNVVSWNAMIAAYAQNGHSTEALVLYWRMNLQGLGTDHVTFVSVLGACSS- 122

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWT 252
             +A G  I+  +   G  DS   +  AL+ M+ + GSV    A ++F  +  ++   W 
Sbjct: 123 --LAQGREIHNRVFYSG-LDSFQSLANALVTMYARFGSVG--DAKRMFQSLQTRDETSWN 177

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I   +Q G    A+R+F +M      P+  T   V+S  S  E+   G+++H+  +  
Sbjct: 178 AVILAHSQSGDWSGALRIFKEMKCD-VKPNSTTYINVISGFSTPEVLPEGRKIHAEIVAN 236

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G   D+ V  +L++MY KC   GS  ++R+VFD+M   +++SW  +I  YV +G    EA
Sbjct: 237 GFDTDLVVATALINMYGKC---GSSHEAREVFDKMKKRDMVSWNVMIGCYVLNGDF-HEA 292

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           ++L+  +          TF S+L AC ++        V++H ++RG   +  V  +L++M
Sbjct: 293 LELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDSEVAVATALVNM 352

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN------LNSEKAFELLHEIEDT--- 483
           YA+ G +E+ARK F ++  ++ V+++T++ AYA N        + K F+ L    DT   
Sbjct: 353 YAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFDRLGS-RDTISW 411

Query: 484 ---------------------------GVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
                                      G+   A TF ++L   +S+G + + + +HA+I 
Sbjct: 412 NAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQIS 471

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           +S  ESN  + N LI+MY+RC ++E A ++F   +++ V+SWT+M+  F+++G  A AL+
Sbjct: 472 ESELESNVVVTNTLINMYARCGSLEEAERLFAAAKEKTVVSWTAMVAAFSQYGRYAEALD 531

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M  +G+KP+ +TY ++L  C+H G + +GW++F  M + H +    +H+A MVDLL
Sbjct: 532 LFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLL 591

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GRSG L +A E + SMP   D + W TFL ACR+HG  ELG+ AAE + E DP   A +I
Sbjct: 592 GRSGRLFDAKELLESMPFEPDPVAWMTFLTACRIHGKLELGEAAAERVYELDPSSTAPYI 651

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
            +SN+YA+ G WE VA++RK+M+ER L K  G S+IE D K+H+F  G   HP+T EI  
Sbjct: 652 AMSNIYAAHGMWEKVASVRKKMEERGLKKLPGLSFIEVDGKLHEFSSGGKYHPRTDEICE 711

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS-KPIRVF 815
           EL +L   ++  GY+PDT  VLH++ E +K   L  HSEK+A+AFGL+S+  S +PIRV 
Sbjct: 712 ELTRLHGLMRAAGYVPDTKAVLHDVSEGEKETMLLYHSEKMAIAFGLVSSRGSGEPIRVV 771

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
           KNLRVC DCHTA K+I+ + GR+I++RD NRFH    DGKCSC DYW
Sbjct: 772 KNLRVCSDCHTATKFIARIAGRDIIVRDCNRFHRFSSDGKCSCGDYW 818



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 161/353 (45%), Gaps = 56/353 (15%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G   +A+     +  +G      T+  +L +C   +    G+LVHS +    L+ 
Sbjct: 283 YVLN-GDFHEALELYQKLDMEGFKRTKATFVSILGACSSVKALAQGRLVHSHILERGLDS 341

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNK----------------------------- 142
              +  +L+++Y+KCG L EA K+F +M N+                             
Sbjct: 342 EVAVATALVNMYAKCGSLEEARKVFNAMKNRDAVAWSTLIGAYASNGYGKDARKARKVFD 401

Query: 143 ----RDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVA 197
               RD +SW++MI++YV  G  V A+ +F EM    G  P+   F AV+ AC++   ++
Sbjct: 402 RLGSRDTISWNAMITTYVQNGCAVAAMKIFREMTGAAGLKPDAVTFIAVLEACASLGRLS 461

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMIT 256
               ++  + +    +S+V V   LI+M+ + GS  LE A ++F    EK  V WT M+ 
Sbjct: 462 EVKALHAQISE-SELESNVVVTNTLINMYARCGS--LEEAERLFAAAKEKTVVSWTAMVA 518

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE-------LELFTSGKQLHSWA 309
             +Q G   +A+ LF +M L G  PD  T + ++  C+           FT   +LH+  
Sbjct: 519 AFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSILFVCTHGGSLEQGWRYFTDMAELHA-- 576

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG 361
               LA       ++VD+  +    G + D++++ + M  + + ++W   +T 
Sbjct: 577 ----LAPTADHFAAMVDLLGR---SGRLFDAKELLESMPFEPDPVAWMTFLTA 622



 Score = 84.3 bits (207), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/193 (24%), Positives = 103/193 (53%), Gaps = 3/193 (1%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++    G  PD  T+  +L++C         K +H+ ++ S+LE N V+ N+LI++Y++C
Sbjct: 433 EMTGAAGLKPDAVTFIAVLEACASLGRLSEVKALHAQISESELESNVVVTNTLINMYARC 492

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L EA ++F +   ++ +VSW++M++++   G+  +A+ +F EM   G  P++  ++++
Sbjct: 493 GSLEEAERLFAA-AKEKTVVSWTAMVAAFSQYGRYAEALDLFQEMDLEGVKPDDVTYTSI 551

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-E 245
           +  C++  ++  G   +  + +            A++D+  + S  L  A ++ + M  E
Sbjct: 552 LFVCTHGGSLEQGWRYFTDMAELHALAPTADHFAAMVDLLGR-SGRLFDAKELLESMPFE 610

Query: 246 KNTVGWTLMITRC 258
            + V W   +T C
Sbjct: 611 PDPVAWMTFLTAC 623


>gi|297800922|ref|XP_002868345.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
 gi|297314181|gb|EFH44604.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata]
          Length = 1047

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 280/789 (35%), Positives = 461/789 (58%), Gaps = 7/789 (0%)

Query: 73   GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
            G  P    +S +L +C +  +  +G+ +H L+ +     ++ + N+L+SLY   G L  A
Sbjct: 266  GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGSLISA 325

Query: 133  NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
              IF +M ++RD V+++++I+     G    A+ +F  M   G  P+    ++++ ACS+
Sbjct: 326  EHIFSNM-SQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSNTLASLVVACSS 384

Query: 193  TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
               +  G  ++ +  K G+  +D   G AL++++ K S D+E+A   F +   +N V W 
Sbjct: 385  DGTLFSGQQLHAYTTKLGFASNDKIEG-ALLNLYAKCS-DIETALNYFLETEVENVVLWN 442

Query: 253  LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +M+     L   R++ R+F  M +   +P+++T   ++  C  L     G+Q+HS  I+T
Sbjct: 443  VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 502

Query: 313  GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
               L+  V   L+DMYAK    G +D +  +  R    +V+SWT +I GY Q    DK A
Sbjct: 503  SFQLNAYVCSVLIDMYAKL---GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK-A 558

Query: 373  VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
            +  F  M+   +  +     + + AC  L      +Q++  A   G + D    N+L+++
Sbjct: 559  LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 618

Query: 433  YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
            Y++ G +E+A  AFE     + +++N +V  + ++ N+E+A  +   +   G+ ++ +TF
Sbjct: 619  YSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMNREGIDSNNFTF 678

Query: 493  ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
             S +  AS    + +G+Q+HA I K+G++S   + NA+ISMY++C ++  A + F E+  
Sbjct: 679  GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNAIISMYAKCGSISDAKKQFLELSM 738

Query: 553  RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            +N +SW +MI  ++KHGF + AL+ F +M+   ++PN +T + VLSACSH GL+ +G ++
Sbjct: 739  KNEVSWNAMINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIEY 798

Query: 613  FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            F SM  E+G+  + EHY C+VD+L R+G L+ A +FI  MP+  D LVWRT L AC VH 
Sbjct: 799  FESMNTEYGLAPKPEHYVCVVDMLTRAGLLSRAKDFILEMPIEPDALVWRTLLSACVVHK 858

Query: 673  DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
            + E+G+ AA  +LE +P+D A ++LLSNLYA    W+     R++MKE+ + KE G SWI
Sbjct: 859  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVCRKWDARDLTRQKMKEKGVKKEPGQSWI 918

Query: 733  EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
            E  N +H F+VG+ +HP   EI+     L  +  E GY+ D   +L EL++EQK   +F 
Sbjct: 919  EVKNSIHSFYVGDQNHPLADEIHEYFKDLTKRASEIGYVQDCFSLLSELQQEQKDPTIFI 978

Query: 793  HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
            HSEK+A++FGL+S   + PI V KNLRVC DCH  IK++S V+ REI++RD+ RFHH + 
Sbjct: 979  HSEKLAISFGLLSLPATMPINVMKNLRVCNDCHDWIKFVSKVSNREIIVRDAYRFHHFEG 1038

Query: 853  GKCSCNDYW 861
            G CSC DYW
Sbjct: 1039 GACSCKDYW 1047



 Score =  292 bits (748), Expect = 5e-76,   Method: Compositional matrix adjust.
 Identities = 184/630 (29%), Positives = 329/630 (52%), Gaps = 17/630 (2%)

Query: 48  NRLIYHLNDGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLT 105
           N++I  L    +   +F L   M  +   P+  T+S +L++C   S  F + + +H+ + 
Sbjct: 138 NKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARII 197

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
              L  ++++ N LI LYS+ G ++ A ++F  +  K D  SW +MIS       +V+AI
Sbjct: 198 YQGLGKSTIVCNPLIDLYSRNGFVDRARRVFDGLYLK-DHSSWVAMISGLSKNECEVEAI 256

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F +M  LG  P  Y FS+V+ AC   E++ IG  ++G +LK G F SD  V  AL+ +
Sbjct: 257 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSL 315

Query: 226 FVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           +   GS  L SA  +F  M++++ V +  +I   +Q G    A+ LF  M L G  PD  
Sbjct: 316 YFHLGS--LISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMQLDGLEPDSN 373

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           TL+ +V ACS      SG+QLH++  + G A +  +  +L+++YAKC+    ++ +   F
Sbjct: 374 TLASLVVACSSDGTLFSGQQLHAYTTKLGFASNDKIEGALLNLYAKCS---DIETALNYF 430

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRD--KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
                 NV+ W  ++  Y   G  D  + + ++F  M   ++ PN +T+ S+LK C  L 
Sbjct: 431 LETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLG 487

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
           D  + EQ+++  +K    L+  V + LI MYA+ G+++ A         K++VS+ TM+ 
Sbjct: 488 DLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTMIA 547

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            Y +    +KA     ++ D G+ +      + +S  + + A+ +G+QIHA+   SGF S
Sbjct: 548 GYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSS 607

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           +    NAL+++YS+C N+E A+  F++ E  + I+W ++++GF + G    AL +F +M 
Sbjct: 608 DLPFQNALVTLYSKCGNIEEAYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFARMN 667

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
            +GI  N  T+ + + A S    + +G K   ++  + G     E    ++ +  + GS+
Sbjct: 668 REGIDSNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNAIISMYAKCGSI 726

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           ++A +    + +  +V  W   + A   HG
Sbjct: 727 SDAKKQFLELSMKNEV-SWNAMINAYSKHG 755



 Score =  248 bits (633), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 168/614 (27%), Positives = 308/614 (50%), Gaps = 15/614 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
           +D +   G  P+  T   LL+ C+++  +   G+ +HS + +   + N+ +   L+  Y 
Sbjct: 55  IDSVENCGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGFDNNACLSEKLLDFYL 114

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
             GDL+ A K+F  M  +R I +W+ MI    +R        +F  M+     PNE  FS
Sbjct: 115 FKGDLDGALKVFDEMP-ERTIFTWNKMIKELASRSLSGKVFCLFGRMVNENVTPNEGTFS 173

Query: 185 AVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            V+ AC    +VA   +  I+  ++  G   S + V   LID++ +    ++ A +VFD 
Sbjct: 174 GVLEACRGG-SVAFDVVEQIHARIIYQGLGKSTI-VCNPLIDLYSRNGF-VDRARRVFDG 230

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           +  K+   W  MI+  ++  C  +AIRLF DM + G +P  +  S V+SAC ++E    G
Sbjct: 231 LYLKDHSSWVAMISGLSKNECEVEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIG 290

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +QLH   ++ G + D  V  +LV +Y      GS+  +  +F  M   + +++  +I G 
Sbjct: 291 EQLHGLVLKLGFSSDTYVCNALVSLYFHL---GSLISAEHIFSNMSQRDAVTYNTLINGL 347

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q G  +K A++LF  M    + P+  T AS++ AC +       +Q++ +  K G A +
Sbjct: 348 SQCGYGEK-AMELFKRMQLDGLEPDSNTLASLVVACSSDGTLFSGQQLHAYTTKLGFASN 406

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
           D +  +L+++YA+   +E A   F     +N+V +N M+ AY    +   +F +  +++ 
Sbjct: 407 DKIEGALLNLYAKCSDIETALNYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFRQMQI 466

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             +  + YT+ S+L     +G +  GEQIH++IIK+ F+ N  + + LI MY++   ++ 
Sbjct: 467 EEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTSFQLNAYVCSVLIDMYAKLGKLDT 526

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A+ +      ++V+SWT+MI G+ ++ F  +AL  F +ML  GI+ + +     +SAC+ 
Sbjct: 527 AWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAG 586

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEFIRSMPLSADVLVW 661
              + EG +   +     G    +     +V L  + G++ EA L F ++   + D + W
Sbjct: 587 LQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSKCGNIEEAYLAFEQTE--AGDNIAW 643

Query: 662 RTFLGACRVHGDTE 675
              +   +  G+ E
Sbjct: 644 NALVSGFQQSGNNE 657


>gi|302816284|ref|XP_002989821.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
 gi|300142387|gb|EFJ09088.1| hypothetical protein SELMODRAFT_130453 [Selaginella moellendorffii]
          Length = 941

 Score =  550 bits (1417), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 297/818 (36%), Positives = 469/818 (57%), Gaps = 13/818 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  +  +G   +A+  L  M  +G  P+  T+  ++  C + R   LG+ +H  +    L
Sbjct: 131 LAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEGL 190

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           EP+ ++ N+L+ +Y  CG  ++   +F  MG +  ++ W++MI+     G+  + + +F 
Sbjct: 191 EPDGILGNALVHMYGSCGSFDDMKSVFSRMG-QSSVLLWTTMIAGCSQNGQYEEGLLVFR 249

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M   G   NE  + +++  C N + V  G +I   +L+   F S   +  +LI ++ + 
Sbjct: 250 KMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILE-SPFCSSTLLATSLISLYGQC 308

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            + L+ A  + + M +++ V W  M+T C Q G   +AI L   M + GF  ++ T   V
Sbjct: 309 GI-LDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEGFGANKVTYLSV 367

Query: 290 VSACSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           + AC+ LE  + G+++H+  +  GL   +V VG S++ MY KC   G  + +  VF+ M 
Sbjct: 368 LEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKC---GQTEAAMSVFEAMP 424

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             + +SW A+I   V    + ++A++LF  M    +  N FT  S+L+ACG L D  +A 
Sbjct: 425 RKDDVSWNAVINASV-GNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLAR 483

Query: 409 QVYTHAVKRGRALDD-CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           Q++  A   G   +   VGNS+++MYAR G + DA+KAF+SL EK LV+++ ++ AYA++
Sbjct: 484 QIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQS 543

Query: 468 LNS--EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF-ESNH 524
            +    +AF+   E+E  G+     TF S L   +++  +  G  +H R   SGF E++ 
Sbjct: 544 KDGPGRRAFKFFQEMEAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSL 603

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + N +I+MY +C +   A  VF +M ++ +ISW S+I  +A +G A  AL    +ML  
Sbjct: 604 VLGNTIINMYGKCGSPSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQ 663

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
           G  P+  T +++L   SHAGL+  G +HFRS   +HG+        C+VDLL R G L  
Sbjct: 664 GFDPDSGTSVSILYGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDA 723

Query: 645 ALEFIRSMP-LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           A E I + P   AD + W T L AC+ +GD + G   AE + E +PQ   + ++L+NLYA
Sbjct: 724 AEELILASPACQADTIAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYA 783

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
           S G W   + IRK M+  ++ KE GCSWIE    VH+F  GE+ HPK  EI  +L++L L
Sbjct: 784 SVGRWSDASRIRKMMERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEDLEKLTL 843

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           +++E GY+PDT  V+H++EE  K + L +HSE++A+ FGL+ST   + IRV KNLRVC D
Sbjct: 844 RMREAGYVPDTTNVVHDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSD 903

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH A K IS V GREIV+RDS+RFHH K G+CSC D+W
Sbjct: 904 CHAATKIISSVVGREIVVRDSSRFHHFKHGQCSCGDFW 941



 Score =  263 bits (672), Expect = 3e-67,   Method: Compositional matrix adjust.
 Identities = 187/683 (27%), Positives = 335/683 (49%), Gaps = 20/683 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++A+     M  +G  PD   + + L +C  S     G+ +HS +  S L  N +
Sbjct: 35  QNGHYREALELFTRMQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNII 94

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           I NSL+++Y KC D+  A K+F  M   RD+VSW++M++ Y   G    A+     M   
Sbjct: 95  ISNSLVNMYGKCQDVPCAEKVFDGM-LLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAE 153

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  PN+  F  ++  C+    + +G  I+  ++  G  + D  +G AL+ M+   GS D 
Sbjct: 154 GVKPNQVTFVTIVDVCAKLRLLDLGRKIHHRIINEG-LEPDGILGNALVHMYGSCGSFD- 211

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
                VF +M + + + WT MI  C+Q G   + + +F  M L G   +  T   +V  C
Sbjct: 212 -DMKSVFSRMGQSSVLLWTTMIAGCSQNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVC 270

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             L+    G+ + +  + +       +  SL+ +Y +C   G +D ++ + + M   +V+
Sbjct: 271 RNLDAVKEGEMIDARILESPFCSSTLLATSLISLYGQC---GILDRAKGLLEHMYQRDVV 327

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           +W A++T   Q+G  + EA+ L   M       N  T+ SVL+AC NL   +   +++  
Sbjct: 328 AWNAMVTACAQNGD-NWEAIHLLRRMDMEGFGANKVTYLSVLEACANLEALSQGREIHAR 386

Query: 414 AVKRGRALDD-CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            +  G    +  VGNS+I+MY + G+ E A   FE++  K+ VS+N +++A   N   + 
Sbjct: 387 VLLCGLLQREVAVGNSVITMYGKCGQTEAAMSVFEAMPRKDDVSWNAVINASVGNSKFQD 446

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH-CIYNALI 531
           A EL H +E  G+ ++ +T  SLL     +  +    QIHAR    GF  N   + N+++
Sbjct: 447 ALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAVGNSVV 506

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA--KHGFAARALEIFYKMLADGIKPN 589
           +MY+RC ++  A + F  +E++ +++W+ ++  +A  K G   RA + F +M A+GIKP 
Sbjct: 507 NMYARCGSLLDAKKAFDSLEEKGLVAWSIILAAYAQSKDGPGRRAFKFFQEMEAEGIKPG 566

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T+++ L AC+    +  G    R       +   +     ++++ G+ GS ++A    
Sbjct: 567 EVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGSPSDAKLVF 626

Query: 650 RSMPLSADVLVWRTFLGACRVHGDT-ELGKHAAEMILEQDPQDPAAHILLSNLY--ASAG 706
             MP    ++ W + + A   +G   E      EM+L+    DP +   +S LY  + AG
Sbjct: 627 DQMPEKC-LISWNSLIVAYAHNGHALEALSSLQEMLLQ--GFDPDSGTSVSILYGLSHAG 683

Query: 707 HWEY-VANIRKRMKERNLIKEAG 728
             E  V + R  +++  L   +G
Sbjct: 684 LLERGVEHFRSSIQDHGLEPSSG 706



 Score =  244 bits (624), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 157/551 (28%), Positives = 281/551 (50%), Gaps = 17/551 (3%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y KC  + +A  +F  +  K ++ SW+ M+++Y   G   +A+ +F  M   G  P++ 
Sbjct: 1   MYGKCARVTDALMVFDGISAK-NVFSWTMMMAAYSQNGHYREALELFTRMQWEGTRPDKV 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F   + AC+ +  +  G  I+  ++  G   S++ +  +L++M+ K   D+  A KVFD
Sbjct: 60  VFVIALDACAASGELDHGRQIHSSVVGSG-LTSNIIISNSLVNMYGKCQ-DVPCAEKVFD 117

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            M  ++ V WT M+    Q GC   A+     M   G  P++ T   +V  C++L L   
Sbjct: 118 GMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLDL 177

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+++H   I  GL  D  +G +LV MY  C   GS DD + VF RM   +V+ WT +I G
Sbjct: 178 GRKIHHRIINEGLEPDGILGNALVHMYGSC---GSFDDMKSVFSRMGQSSVLLWTTMIAG 234

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
             Q+ G+ +E + +F  M    V  N  T+ S+++ C NL      E +    ++     
Sbjct: 235 CSQN-GQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCS 293

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              +  SLIS+Y + G ++ A+   E ++++++V++N MV A A+N ++ +A  LL  ++
Sbjct: 294 STLLATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMD 353

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCANV 540
             G G +  T+ S+L   +++ A+ +G +IHAR++  G  +    + N++I+MY +C   
Sbjct: 354 MEGFGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQT 413

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           EAA  VF+ M  ++ +SW ++I     +     ALE+F+ M  +G++ N  T +++L AC
Sbjct: 414 EAAMSVFEAMPRKDDVSWNAVINASVGNSKFQDALELFHGMELEGLRSNEFTLLSLLEAC 473

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYAC----MVDLLGRSGSLTEALEFIRSMPLSA 656
              GL  E  K  R ++          +       +V++  R GSL +A +   S+    
Sbjct: 474 --GGL--EDLKLARQIHARAAAGGFGGNSTAVGNSVVNMYARCGSLLDAKKAFDSLE-EK 528

Query: 657 DVLVWRTFLGA 667
            ++ W   L A
Sbjct: 529 GLVAWSIILAA 539



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 219/480 (45%), Gaps = 48/480 (10%)

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MY KC     V D+  VFD +   NV SWT ++  Y Q+G   +EA++LF+ M      P
Sbjct: 1   MYGKCA---RVTDALMVFDGISAKNVFSWTMMMAAYSQNG-HYREALELFTRMQWEGTRP 56

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           +   F   L AC    + +   Q+++  V  G   +  + NSL++MY +   +  A K F
Sbjct: 57  DKVVFVIALDACAASGELDHGRQIHSSVVGSGLTSNIIISNSLVNMYGKCQDVPCAEKVF 116

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + +  +++VS+  M+  YA+N    +A E L  ++  GV  +  TF +++   + +  + 
Sbjct: 117 DGMLLRDVVSWTAMLAVYAQNGCWSQALECLSRMDAEGVKPNQVTFVTIVDVCAKLRLLD 176

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
            G +IH RII  G E +  + NAL+ MY  C + +    VF  M   +V+ WT+MI G +
Sbjct: 177 LGRKIHHRIINEGLEPDGILGNALVHMYGSCGSFDDMKSVFSRMGQSSVLLWTTMIAGCS 236

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG----------------- 609
           ++G     L +F KM  +G+K N +TY++++  C +   + EG                 
Sbjct: 237 QNGQYEEGLLVFRKMDLEGVKANEVTYMSMVEVCRNLDAVKEGEMIDARILESPFCSSTL 296

Query: 610 -WKHFRSMYDEHGIVQR----MEH--------YACMVDLLGRSGSLTEALEFIRSMPL-- 654
                 S+Y + GI+ R    +EH        +  MV    ++G   EA+  +R M +  
Sbjct: 297 LATSLISLYGQCGILDRAKGLLEHMYQRDVVAWNAMVTACAQNGDNWEAIHLLRRMDMEG 356

Query: 655 -SADVLVWRTFLGACRVHGDTELGK--HAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
             A+ + + + L AC        G+  HA  ++     ++ A    +  +Y   G  E  
Sbjct: 357 FGANKVTYLSVLEACANLEALSQGREIHARVLLCGLLQREVAVGNSVITMYGKCGQTEAA 416

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
            ++ + M  ++ +     SW    N V    VG +     LE++  ++   L+  EF  L
Sbjct: 417 MSVFEAMPRKDDV-----SW----NAVINASVGNSKFQDALELFHGMELEGLRSNEFTLL 467


>gi|356569698|ref|XP_003553033.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Glycine max]
          Length = 824

 Score =  549 bits (1415), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 306/838 (36%), Positives = 487/838 (58%), Gaps = 25/838 (2%)

Query: 28  LPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           LPP +  P +        L    IYH     +Q  I          N+  +  ++L+ +S
Sbjct: 8   LPPRNFKPILQ-------LQQPCIYHFFSSSLQHKISHDPDNKNNKNNNVVVDFNLVFRS 60

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C    N ++ K +H+LL       + V+L  L++LY+  GDL+ ++  FK +  +++I S
Sbjct: 61  CT---NINVAKQLHALLLVLGKAQDVVLLTQLVTLYATLGDLSLSSTTFKHI-QRKNIFS 116

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           W+SM+S+YV RG+  D++    E+L L G  P+ Y F  V++AC +   +A G  ++ ++
Sbjct: 117 WNSMVSAYVRRGRYRDSMDCVTELLSLSGVRPDFYTFPPVLKACLS---LADGEKMHCWV 173

Query: 207 LKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
           LK G F+ DV V  +LI ++ + G+V  E A+KVF  M  ++   W  MI+   Q G   
Sbjct: 174 LKMG-FEHDVYVAASLIHLYSRFGAV--EVAHKVFVDMPVRDVGSWNAMISGFCQNGNVA 230

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           +A+R+   M       D  T+S ++  C++      G  +H + I+ GL  DV V  +L+
Sbjct: 231 EALRVLDRMKTEEVKMDTVTVSSMLPICAQSNDVVGGVLVHLYVIKHGLESDVFVSNALI 290

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           +MY+K    G + D+++VFD M   +++SW +II  Y Q+      A+  F +M+   + 
Sbjct: 291 NMYSKF---GRLQDAQRVFDGMEVRDLVSWNSIIAAYEQNDD-PVTALGFFKEMLFVGMR 346

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALDDCVGNSLISMYARSGRMEDARK 444
           P+  T  S+    G L D  +   V+   V+ R   +D  +GN+L++MYA+ G ++ AR 
Sbjct: 347 PDLLTVVSLASIFGQLSDRRIGRAVHGFVVRCRWLEVDIVIGNALVNMYAKLGSIDCARA 406

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED-TGVGTSAYTFASLLSGASSIG 503
            FE L  ++++S+NT++  YA+N  + +A +  + +E+   +  +  T+ S+L   S +G
Sbjct: 407 VFEQLPSRDVISWNTLITGYAQNGLASEAIDAYNMMEEGRTIVPNQGTWVSILPAYSHVG 466

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           A+ +G +IH R+IK+    +  +   LI MY +C  +E A  +F E+     + W ++I+
Sbjct: 467 ALQQGMKIHGRLIKNCLFLDVFVATCLIDMYGKCGRLEDAMSLFYEIPQETSVPWNAIIS 526

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
               HG   +AL++F  M ADG+K + IT++++LSACSH+GL+ E    F +M  E+ I 
Sbjct: 527 SLGIHGHGEKALQLFKDMRADGVKADHITFVSLLSACSHSGLVDEAQWCFDTMQKEYRIK 586

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             ++HY CMVDL GR+G L +A   + +MP+ AD  +W T L ACR+HG+ ELG  A++ 
Sbjct: 587 PNLKHYGCMVDLFGRAGYLEKAYNLVSNMPIQADASIWGTLLAACRIHGNAELGTFASDR 646

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           +LE D ++   ++LLSN+YA+ G WE    +R   ++R L K  G S +   + V  F+ 
Sbjct: 647 LLEVDSENVGYYVLLSNIYANVGKWEGAVKVRSLARDRGLRKTPGWSSVVVGSVVEVFYA 706

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G  SHP+  EIY EL  L  K+K  GY+PD +FVL ++EE++K + L  HSE++A+ FG+
Sbjct: 707 GNQSHPQCAEIYEELRVLNAKMKSLGYVPDYSFVLQDVEEDEKEEILTSHSERLAIVFGI 766

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IST    PIR+FKNLRVCGDCH A KYIS +T REI++RDSNRFHH KDG CSC DYW
Sbjct: 767 ISTPPKSPIRIFKNLRVCGDCHNATKYISKITEREIIVRDSNRFHHFKDGICSCGDYW 824


>gi|356574473|ref|XP_003555371.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 301/810 (37%), Positives = 466/810 (57%), Gaps = 9/810 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           ++ G+  +AI     M   G   D  T+  +LK+C       LG  +H +  +       
Sbjct: 121 VSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCGFGEFV 180

Query: 114 VILNSLISLYSKCGDLNEANKIFKS-MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            + N+LI++Y KCGDL  A  +F   M  K D VSW+S+IS++V  GK ++A+ +F  M 
Sbjct: 181 FVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLFRRMQ 240

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           E+G   N Y F A ++   +   V +G  I+G  LK  +F +DV V  ALI M+ K    
Sbjct: 241 EVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHF-ADVYVANALIAMYAKCG-R 298

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A +VF  M  ++ V W  +++   Q    RDA+  F DM  S   PD+ ++  +++A
Sbjct: 299 MEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNYFRDMQNSAQKPDQVSVLNLIAA 358

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
                   +GK++H++AIR GL  ++ +G +L+DMYAKC     V      F+ M + ++
Sbjct: 359 SGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCC---VKHMGYAFECMHEKDL 415

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT II GY Q+     EA+ LF  +    +  +     SVL+AC  L   N   +++ 
Sbjct: 416 ISWTTIIAGYAQNECH-LEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFIREIHG 474

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +  KR  A D  + N+++++Y   G  + AR+AFES+  K++VS+ +M+     N    +
Sbjct: 475 YVFKRDLA-DIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHNGLPVE 533

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A EL + ++ T +   +    S LS  +++ ++ KG++IH  +I+ GF     I ++L+ 
Sbjct: 534 ALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGFLIRKGFFLEGPIASSLVD 593

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY+ C  VE + ++F  ++ R++I WTSMI     HG    A+ +F KM  + + P+ IT
Sbjct: 594 MYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNEAIALFKKMTDENVIPDHIT 653

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++A+L ACSH+GL+ EG + F  M   + +    EHYACMVDLL RS SL EA +F+RSM
Sbjct: 654 FLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVDLLSRSNSLEEAYQFVRSM 713

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+     VW   LGAC +H + ELG+ AA+ +L+ D ++   + L+SN++A+ G W  V 
Sbjct: 714 PIKPSSEVWCALLGACHIHSNKELGELAAKELLQSDTKNSGKYALISNIFAADGRWNDVE 773

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA-LKIKEFGYL 771
            +R RMK   L K  GCSWIE DNK+H F   + SHP+T +IY +L Q   L  K+ GY+
Sbjct: 774 EVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDIYLKLAQFTKLLGKKGGYI 833

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
             T FV H + EE+K Q L++HSE++A+ +GL+ T K   IR+ KNLR+C DCHT  K  
Sbjct: 834 AQTKFVFHNVSEEEKTQMLYRHSERLALGYGLLVTPKGTSIRITKNLRICDDCHTFFKIA 893

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S V+ R +V+RD+NRFHH + G CSC D+W
Sbjct: 894 SEVSQRALVVRDANRFHHFERGLCSCGDFW 923



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 181/644 (28%), Positives = 327/644 (50%), Gaps = 31/644 (4%)

Query: 41  TTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDT-------YSLLLKSCIRSRN 93
            T  PL +  +  LN G +  A  +L L++    HP L T       +SLLL  C+  + 
Sbjct: 6   VTPLPLKSISVNTLNKGTLNPAFQSLTLLS---THP-LATPSRLEHAHSLLLDLCVAVKA 61

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
              G+ +H+ L +S L  ++ +   L+ +Y KCG L +A K+F  M  +R I +W++M+ 
Sbjct: 62  LPQGQQLHARLLKSHL--SAFLATKLLHMYEKCGSLKDAVKVFDEM-TERTIFTWNAMMG 118

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           ++V+ GK ++AI ++ EM  LG   +   F +V++AC       +G  I+G  +KCG F 
Sbjct: 119 AFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKCG-FG 177

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
             V V  ALI M+ K   DL  A  +FD   M +++TV W  +I+     G   +A+ LF
Sbjct: 178 EFVFVCNALIAMYGKCG-DLGGARVLFDGIMMEKEDTVSWNSIISAHVTEGKCLEALSLF 236

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
             M   G   + +T    +    +      G  +H  A+++    DV V  +L+ MYAKC
Sbjct: 237 RRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALKSNHFADVYVANALIAMYAKC 296

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G ++D+ +VF  ML  + +SW  +++G VQ+    ++A+  F DM      P+  + 
Sbjct: 297 ---GRMEDAERVFASMLCRDYVSWNTLLSGLVQN-ELYRDALNYFRDMQNSAQKPDQVSV 352

Query: 392 ASVLKA---CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
            +++ A    GNLL+    ++V+ +A++ G   +  +GN+LI MYA+   ++    AFE 
Sbjct: 353 LNLIAASGRSGNLLN---GKEVHAYAIRNGLDSNMQIGNTLIDMYAKCCCVKHMGYAFEC 409

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           + EK+L+S+ T++  YA+N    +A  L  +++  G+        S+L   S + +    
Sbjct: 410 MHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNFI 469

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
            +IH  + K    ++  + NA++++Y    + + A + F+ +  ++++SWTSMIT    +
Sbjct: 470 REIHGYVFKRDL-ADIMLQNAIVNVYGEVGHRDYARRAFESIRSKDIVSWTSMITCCVHN 528

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G    ALE+FY +    I+P+ I  I+ LSA ++   + +G K         G       
Sbjct: 529 GLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG-KEIHGFLIRKGFFLEGPI 587

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            + +VD+    G++  + +   S+    D+++W + + A  +HG
Sbjct: 588 ASSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHG 630



 Score =  198 bits (504), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 155/539 (28%), Positives = 265/539 (49%), Gaps = 36/539 (6%)

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
           E+  S ++  C   + +  G  ++  LLK         +   L+ M+ K GS  L+ A K
Sbjct: 46  EHAHSLLLDLCVAVKALPQGQQLHARLLKSHL---SAFLATKLLHMYEKCGS--LKDAVK 100

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VFD+MTE+    W  M+      G   +AI L+ +M + G   D  T   V+ AC  L  
Sbjct: 101 VFDEMTERTIFTWNAMMGAFVSSGKYLEAIELYKEMRVLGVAIDACTFPSVLKACGALGE 160

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLDHNVMSWT 356
              G ++H  A++ G    V V  +L+ MY KC   G +  +R +FD   M   + +SW 
Sbjct: 161 SRLGAEIHGVAVKCGFGEFVFVCNALIAMYGKC---GDLGGARVLFDGIMMEKEDTVSWN 217

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           +II+ +V + G+  EA+ LF  M +  VA N +TF + L+   +     +   ++  A+K
Sbjct: 218 SIISAHV-TEGKCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAALK 276

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                D  V N+LI+MYA+ GRMEDA + F S+  ++ VS+NT++    +N     A   
Sbjct: 277 SNHFADVYVANALIAMYAKCGRMEDAERVFASMLCRDYVSWNTLLSGLVQNELYRDALNY 336

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             +++++       +  +L++ +   G +  G+++HA  I++G +SN  I N LI MY++
Sbjct: 337 FRDMQNSAQKPDQVSVLNLIAASGRSGNLLNGKEVHAYAIRNGLDSNMQIGNTLIDMYAK 396

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  V+     F+ M ++++ISWT++I G+A++     A+ +F K+   G+  + +   +V
Sbjct: 397 CCCVKHMGYAFECMHEKDLISWTTIIAGYAQNECHLEAINLFRKVQVKGMDVDPMMIGSV 456

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM-----VDLLGRSGS---LTEALEF 648
           L ACS       G K    + + HG V + +    M     V++ G  G       A E 
Sbjct: 457 LRACS-------GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHRDYARRAFES 509

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYASA 705
           IR    S D++ W + +  C  +G   L   A E+   L+Q    P +  ++S L A+A
Sbjct: 510 IR----SKDIVSWTSMITCCVHNG---LPVEALELFYSLKQTNIQPDSIAIISALSATA 561


>gi|302758642|ref|XP_002962744.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
 gi|300169605|gb|EFJ36207.1| hypothetical protein SELMODRAFT_78092 [Selaginella moellendorffii]
          Length = 935

 Score =  549 bits (1414), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 303/827 (36%), Positives = 493/827 (59%), Gaps = 30/827 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +  GR  KA+   D M  +   P+      L+ +C    N   G+ +HS ++    E NS
Sbjct: 120 MEHGRPDKAMELFDRMEVR---PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENS 176

Query: 114 VILNSLISLYSKCGDLNEANKIFKSM--GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           V+ N+LIS+YSKCG L +A + F  +   +KRD+V+W++MIS+++  G   +A+ +F +M
Sbjct: 177 VLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDM 236

Query: 172 LELGFCP-NEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVK 228
              G  P N   F +V+ +C     +++  +  I+G ++  G  + +  V  AL+D + K
Sbjct: 237 DRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGAG-IEREAFVRTALVDSYGK 295

Query: 229 -GSVDLESAYKVF----DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            GS+D   A++VF    D+    + V  + MI+ C Q G P++++RLF  M L G  P  
Sbjct: 296 LGSLD--DAWEVFLRKGDEEPSTSLVTCSAMISACWQNGWPQESLRLFFAMNLEGTKPSG 353

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRK 342
            TL  V++ACS L++ ++   +   A+    A  D  +G +L+  YA+      +  +R 
Sbjct: 354 VTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGTTLLTTYAR---SNDLPRARA 410

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL- 401
            FD +   +V+SW A+   Y+Q   R +EA+ LF  M+   V P+  TF + L AC    
Sbjct: 411 TFDAIQSPDVVSWNAMAAAYLQHH-RSREALVLFERMLLEGVRPSVATFITALTACAAYP 469

Query: 402 --LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE--SLFEKNLVSY 457
               S + +++ +   + G   D  V N+ ++MYA+ G + DAR  FE  S   ++ +++
Sbjct: 470 PQTASAIGKRIQSLLEEAGLEGDTAVANATLNMYAKCGSLADARAVFERISPARRDCITW 529

Query: 458 NTMVDAYAKNLNSEKAFELLHEIE-DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           N+M+ AY  +   ++AFEL   +E +  V  +  TF ++L  ++S  +I +G +IHAR++
Sbjct: 530 NSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVV 589

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEME--DRNVISWTSMITGFAKHGFAARA 574
            +GFES+  I NAL++MY++C +++ A  +F +      +VI+WTS+I G+A++G A RA
Sbjct: 590 SNGFESDTVIQNALLNMYAKCGSLDDAQAIFDKSSSNQEDVIAWTSLIAGYAQYGQAERA 649

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L++F+ M   G++PN +T+I+ L+AC+H G + +G +    M  +HGI+   +H++C+VD
Sbjct: 650 LKLFWTMQQQGVRPNHVTFISALTACNHGGKLEQGCELLSGMTPDHGILPASKHFSCIVD 709

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LLGR G L EA + +      ADV+ W   L AC+   + E G+  AE I++ DP+  ++
Sbjct: 710 LLGRCGRLDEAEKLLERTS-QADVITWMALLDACKNSKELERGERCAERIMQLDPEVASS 768

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           +I+L+++YA+AG W   A IRK M ++ +  + GCS +E + ++H F  G+ SHPK+ EI
Sbjct: 769 YIVLASMYAAAGRWNEAATIRKTMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEI 828

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRV 814
           Y EL++L   IK  GY+ DT  VLH++ +E K + L +HSEK+A+AFGL+ST    P+RV
Sbjct: 829 YLELERLHWSIKAAGYVADTGLVLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRV 888

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            KNLRVC DCHTA K IS VTGR+I++RDS+R+HH   G CSC DYW
Sbjct: 889 IKNLRVCSDCHTATKLISKVTGRDILMRDSSRYHHFTSGTCSCGDYW 935



 Score =  229 bits (585), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 178/621 (28%), Positives = 318/621 (51%), Gaps = 43/621 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHS--LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           TY  LL++C R R    G+ +H+  L  R  L  +S + + LI +++KCG+L EA  +  
Sbjct: 45  TYGCLLQACGRLRALKQGQRLHAHILSRRIDLHNHSFLASDLIVMHAKCGNLAEAEALAD 104

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
              +   + S ++MI +++  G+   A+ +F  M      PN +   A++ ACS   N+A
Sbjct: 105 RFAS---VYSCTAMIRAWMEHGRPDKAMELFDRM---EVRPNCHALIALVNACSCLGNLA 158

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS-VDLESAYKVFDKMTEKNTVGWTLMI 255
            G  I+  +     F+ +  +G ALI M+ K GS +D + A+    + ++++ V W  MI
Sbjct: 159 AGRRIHSQISD-RDFEENSVLGNALISMYSKCGSLIDAKQAFDRLPRASKRDVVTWNAMI 217

Query: 256 TRCTQLGCPRDAIRLFLDMILSGF-LPDRFTLSGVVSACSELELFT--SGKQLHSWAIRT 312
           +   + G  R+A++LF DM   G   P+  T   V+ +C E  L +    + +H   +  
Sbjct: 218 SAFLRNGSAREALQLFRDMDRDGAPPPNSVTFVSVLDSCVEAGLLSLEDVRAIHGRIVGA 277

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH----NVMSWTAIITGYVQSGGR 368
           G+  +  V  +LVD Y K    GS+DD+ +VF R  D     ++++ +A+I+   Q+G  
Sbjct: 278 GIEREAFVRTALVDSYGKL---GSLDDAWEVFLRKGDEEPSTSLVTCSAMISACWQNGW- 333

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL-DDCVGN 427
            +E+++LF  M      P+  T  SVL AC  L   +    V   A++   A  D+ +G 
Sbjct: 334 PQESLRLFFAMNLEGTKPSGVTLVSVLNACSMLQVGSATAFVLEQAMEVVSATRDNVLGT 393

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +L++ YARS  +  AR  F+++   ++VS+N M  AY ++  S +A  L   +   GV  
Sbjct: 394 TLLTTYARSNDLPRARATFDAIQSPDVVSWNAMAAAYLQHHRSREALVLFERMLLEGVRP 453

Query: 488 SAYTFASLLSGAS-----SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           S  TF + L+  +     +  AIGK  +I + + ++G E +  + NA ++MY++C ++  
Sbjct: 454 SVATFITALTACAAYPPQTASAIGK--RIQSLLEEAGLEGDTAVANATLNMYAKCGSLAD 511

Query: 543 AFQVFKEMED--RNVISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSA 599
           A  VF+ +    R+ I+W SM+  +  HG    A E+F  M A+  +KPN +T++AVL A
Sbjct: 512 ARAVFERISPARRDCITWNSMLAAYGHHGLGKEAFELFQAMEAEKLVKPNKVTFVAVLDA 571

Query: 600 CSHAGLISEGWK-HFRSM---YDEHGIVQRMEHYACMVDLLGRSGSLTEALE-FIRSMPL 654
            +    I++G + H R +   ++   ++Q       ++++  + GSL +A   F +S   
Sbjct: 572 STSRTSIAQGREIHARVVSNGFESDTVIQN-----ALLNMYAKCGSLDDAQAIFDKSSSN 626

Query: 655 SADVLVWRTFLGACRVHGDTE 675
             DV+ W + +     +G  E
Sbjct: 627 QEDVIAWTSLIAGYAQYGQAE 647


>gi|4455294|emb|CAB36829.1| putative protein [Arabidopsis thaliana]
 gi|7268069|emb|CAB78407.1| putative protein [Arabidopsis thaliana]
          Length = 1024

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 279/789 (35%), Positives = 461/789 (58%), Gaps = 7/789 (0%)

Query: 73   GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
            G  P    +S +L +C +  +  +G+ +H L+ +     ++ + N+L+SLY   G+L  A
Sbjct: 243  GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 302

Query: 133  NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
              IF +M ++RD V+++++I+     G    A+ +F  M   G  P+    ++++ ACS 
Sbjct: 303  EHIFSNM-SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 361

Query: 193  TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
               +  G  ++ +  K G+  ++   G AL++++ K   D+E+A   F +   +N V W 
Sbjct: 362  DGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAK-CADIETALDYFLETEVENVVLWN 419

Query: 253  LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +M+     L   R++ R+F  M +   +P+++T   ++  C  L     G+Q+HS  I+T
Sbjct: 420  VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 479

Query: 313  GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
               L+  V   L+DMYAK    G +D +  +  R    +V+SWT +I GY Q    DK A
Sbjct: 480  NFQLNAYVCSVLIDMYAKL---GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK-A 535

Query: 373  VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
            +  F  M+   +  +     + + AC  L      +Q++  A   G + D    N+L+++
Sbjct: 536  LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 595

Query: 433  YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
            Y+R G++E++  AFE     + +++N +V  + ++ N+E+A  +   +   G+  + +TF
Sbjct: 596  YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 655

Query: 493  ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
             S +  AS    + +G+Q+HA I K+G++S   + NALISMY++C ++  A + F E+  
Sbjct: 656  GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 715

Query: 553  RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            +N +SW ++I  ++KHGF + AL+ F +M+   ++PN +T + VLSACSH GL+ +G  +
Sbjct: 716  KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 775

Query: 613  FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            F SM  E+G+  + EHY C+VD+L R+G L+ A EFI+ MP+  D LVWRT L AC VH 
Sbjct: 776  FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 835

Query: 673  DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
            + E+G+ AA  +LE +P+D A ++LLSNLYA +  W+     R++MKE+ + KE G SWI
Sbjct: 836  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 895

Query: 733  EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
            E  N +H F+VG+ +HP   EI+     L  +  E GY+ D   +L+EL+ EQK   +F 
Sbjct: 896  EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 955

Query: 793  HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
            HSEK+A++FGL+S   + PI V KNLRVC DCH  IK++S V+ REI++RD+ RFHH + 
Sbjct: 956  HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1015

Query: 853  GKCSCNDYW 861
            G CSC DYW
Sbjct: 1016 GACSCKDYW 1024



 Score =  283 bits (725), Expect = 2e-73,   Method: Compositional matrix adjust.
 Identities = 181/632 (28%), Positives = 324/632 (51%), Gaps = 21/632 (3%)

Query: 48  NRLIYHLNDGRVQKAIFTLDL-MTQKGNHPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLT 105
           N++I  L    +   +F L + M  +   P+  T+S +L++C   S  F + + +H+ + 
Sbjct: 115 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 174

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
              L  ++V+ N LI LYS+ G ++ A ++F  +   +D  SW +MIS       + +AI
Sbjct: 175 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RLKDHSSWVAMISGLSKNECEAEAI 233

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F +M  LG  P  Y FS+V+ AC   E++ IG  ++G +LK G F SD  V  AL+ +
Sbjct: 234 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSL 292

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           +     +L SA  +F  M++++ V +  +I   +Q G    A+ LF  M L G  PD  T
Sbjct: 293 YFHLG-NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 351

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L+ +V ACS       G+QLH++  + G A +  +  +L+++YAKC       D     D
Sbjct: 352 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA------DIETALD 405

Query: 346 RMLD---HNVMSWTAIITGYVQSGGRD--KEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             L+    NV+ W  ++  Y   G  D  + + ++F  M   ++ PN +T+ S+LK C  
Sbjct: 406 YFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 462

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L D  + EQ+++  +K    L+  V + LI MYA+ G+++ A         K++VS+ TM
Sbjct: 463 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 522

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +  Y +    +KA     ++ D G+ +      + +S  + + A+ +G+QIHA+   SGF
Sbjct: 523 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 582

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            S+    NAL+++YSRC  +E ++  F++ E  + I+W ++++GF + G    AL +F +
Sbjct: 583 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 642

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M  +GI  N  T+ + + A S    + +G K   ++  + G     E    ++ +  + G
Sbjct: 643 MNREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCG 701

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           S+++A +    +    +V  W   + A   HG
Sbjct: 702 SISDAEKQFLEVSTKNEV-SWNAIINAYSKHG 732



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 177/618 (28%), Positives = 312/618 (50%), Gaps = 23/618 (3%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
           +D +  +G  P+  T   LL+ C+++  +   G+ +HS + +  L+ N  +   L   Y 
Sbjct: 32  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 91

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
             GDL  A K+F  M  +R I +W+ MI    +R    +   +FV M+     PNE  FS
Sbjct: 92  FKGDLYGAFKVFDEMP-ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 150

Query: 185 AVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
            V+ AC    +VA   +  I+  +L  G  DS V V   LID++ + G VDL  A +VFD
Sbjct: 151 GVLEACRGG-SVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDL--ARRVFD 206

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            +  K+   W  MI+  ++  C  +AIRLF DM + G +P  +  S V+SAC ++E    
Sbjct: 207 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 266

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+QLH   ++ G + D  V  +LV +Y      G++  +  +F  M   + +++  +I G
Sbjct: 267 GEQLHGLVLKLGFSSDTYVCNALVSLYFHL---GNLISAEHIFSNMSQRDAVTYNTLING 323

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRG 418
             Q G  +K A++LF  M    + P+  T AS++ AC   G L      +Q++ +  K G
Sbjct: 324 LSQCGYGEK-AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR---GQQLHAYTTKLG 379

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
            A ++ +  +L+++YA+   +E A   F     +N+V +N M+ AY    +   +F +  
Sbjct: 380 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 439

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +++   +  + YT+ S+L     +G +  GEQIH++IIK+ F+ N  + + LI MY++  
Sbjct: 440 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 499

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            ++ A+ +      ++V+SWT+MI G+ ++ F  +AL  F +ML  GI+ + +     +S
Sbjct: 500 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 559

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEFIRSMPLSAD 657
           AC+    + EG +   +     G    +     +V L  R G + E+ L F ++   + D
Sbjct: 560 ACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE--AGD 616

Query: 658 VLVWRTFLGACRVHGDTE 675
            + W   +   +  G+ E
Sbjct: 617 NIAWNALVSGFQQSGNNE 634


>gi|357128220|ref|XP_003565772.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g13230, mitochondrial-like [Brachypodium distachyon]
          Length = 1206

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 289/790 (36%), Positives = 475/790 (60%), Gaps = 11/790 (1%)

Query: 76   PDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSK--LEPNSVILNSLISLYSKCGDLNE 131
            P +D+Y+   LL+ C+   +   G+ VH  + RS      +    N L+++Y+K G    
Sbjct: 424  PGVDSYAYARLLQGCVARGDARGGRAVHGHVVRSGGLARLDLFCANVLLNMYTKVGPFGS 483

Query: 132  ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
            A+++F  +  +R++VS+ +++  +  RG+  +A  +F  +   G   N++  + V++   
Sbjct: 484  AHRVFDGL-PERNMVSFVTLVQGHALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVV 542

Query: 192  NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
              + + +   ++    K G+ D +  VG ALID +    V +  A +VFD +  K+ V W
Sbjct: 543  AMDTLGLAWGVHACACKLGH-DRNAFVGSALIDAYSMCGV-VSDARRVFDGIVGKDAVAW 600

Query: 252  TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            T M++  ++  CP + +++F  M ++    + F L+ V+ A   L     GK +H+ +++
Sbjct: 601  TAMVSCYSENDCPENTLQIFSKMRVAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVK 660

Query: 312  TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            T    +  V  +L+DMYAKC   G+++D+R  F+ + + +V+ W+ +I+ Y Q   ++++
Sbjct: 661  TLYDTERHVYGALLDMYAKC---GNIEDARLAFEMVTNDDVILWSLMISRYAQCN-QNEQ 716

Query: 372  AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            A +LF  M++  V+PN F+ +SVL+AC N+   ++ +Q++ HA+K G   +  VGN+LI 
Sbjct: 717  AFELFIRMMRSSVSPNEFSLSSVLQACANMPLLDLGKQIHNHAIKIGHESELFVGNALID 776

Query: 432  MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
            +YA+   ME + + F SL + N VS+NT++  Y+K+   E A  +  E+    V ++  T
Sbjct: 777  LYAKCSDMESSLEIFSSLRDVNEVSWNTIIVGYSKSGFGEAALSVFREMRAASVPSTQVT 836

Query: 492  FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            ++S+L   +S  +I    Q+H  I KS F S+  + N+LI  Y++C  +  A ++F+ ++
Sbjct: 837  YSSVLRACASTASINHVGQVHCLIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLK 896

Query: 552  DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            + +++SW ++I+G+A HG AA A E+F  M  + IK N IT++A+LS C   GL+S+G  
Sbjct: 897  ECDLVSWNAIISGYAVHGQAAMAQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLS 956

Query: 612  HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
             F SM  +HGI   MEHY C+V LLGR+G L +AL FI  +P +   +VWR  L +C VH
Sbjct: 957  LFDSMRLDHGIEPSMEHYTCIVRLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVH 1016

Query: 672  GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
             + ELG+ +AE +LE +PQD   ++LLSN+Y++AG  + VA  RK M+   + KE G SW
Sbjct: 1017 KNVELGRFSAEKVLEIEPQDETTYVLLSNMYSAAGSLDQVAFFRKSMRNIGVRKEPGLSW 1076

Query: 732  IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
            +E   +VH F VG   HP    I A L+ L LK    GY+PDT+ VLH+LEEEQKV+ L+
Sbjct: 1077 VEIKGEVHAFSVGSEDHPCMRVINAMLEWLNLKAIREGYVPDTDEVLHDLEEEQKVRMLW 1136

Query: 792  QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
             HSE++A+A+GL+ T    PIR+ KNLR C DCH   K IS +  +EI++RD NRFHH +
Sbjct: 1137 VHSERLALAYGLVMTPPGHPIRIMKNLRSCLDCHAIFKVISKIVKQEIIVRDINRFHHFE 1196

Query: 852  DGKCSCNDYW 861
            +G CSC DYW
Sbjct: 1197 EGTCSCGDYW 1206



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 147/518 (28%), Positives = 261/518 (50%), Gaps = 9/518 (1%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            H   G  ++A      +  +G+  +    + +LK  +      L   VH+   +   + N
Sbjct: 506  HALRGEFEEASALFQRLRWEGHEVNQFVLTTVLKLVVAMDTLGLAWGVHACACKLGHDRN 565

Query: 113  SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            + + ++LI  YS CG +++A ++F  +  K D V+W++M+S Y       + + +F +M 
Sbjct: 566  AFVGSALIDAYSMCGVVSDARRVFDGIVGK-DAVAWTAMVSCYSENDCPENTLQIFSKMR 624

Query: 173  ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
                  N +  ++V+RA     +V +G  I+   +K  Y D++  V  AL+DM+ K   +
Sbjct: 625  VAVSKLNPFALTSVLRAAVCLSSVVLGKGIHACSVKTLY-DTERHVYGALLDMYAKCG-N 682

Query: 233  LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            +E A   F+ +T  + + W+LMI+R  Q      A  LF+ M+ S   P+ F+LS V+ A
Sbjct: 683  IEDARLAFEMVTNDDVILWSLMISRYAQCNQNEQAFELFIRMMRSSVSPNEFSLSSVLQA 742

Query: 293  CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            C+ + L   GKQ+H+ AI+ G   ++ VG +L+D+YAKC+    ++ S ++F  + D N 
Sbjct: 743  CANMPLLDLGKQIHNHAIKIGHESELFVGNALIDLYAKCS---DMESSLEIFSSLRDVNE 799

Query: 353  MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +SW  II GY +S G  + A+ +F +M    V     T++SVL+AC +    N   QV+ 
Sbjct: 800  VSWNTIIVGYSKS-GFGEAALSVFREMRAASVPSTQVTYSSVLRACASTASINHVGQVHC 858

Query: 413  HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
               K     D  V NSLI  YA+ G + DAR+ FE+L E +LVS+N ++  YA +  +  
Sbjct: 859  LIEKSTFNSDTIVSNSLIDSYAKCGCIRDAREIFETLKECDLVSWNAIISGYAVHGQAAM 918

Query: 473  AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALI 531
            A EL   +    +  +  TF +LLS   S G + +G  +   + +  G E +   Y  ++
Sbjct: 919  AQELFDMMSKNSIKANDITFVALLSVCGSTGLVSQGLSLFDSMRLDHGIEPSMEHYTCIV 978

Query: 532  SMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
             +  R   +  A     ++    + + W ++++    H
Sbjct: 979  RLLGRAGRLNDALNFIGDIPSAPSAMVWRALLSSCIVH 1016


>gi|297820538|ref|XP_002878152.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323990|gb|EFH54411.1| hypothetical protein ARALYDRAFT_486188 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 886

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 310/889 (34%), Positives = 515/889 (57%), Gaps = 40/889 (4%)

Query: 3   TLSLPAPAKIPPPSSFKPSNPSRQNLPPSS------------SPPFIAQPTTSEPLSNRL 50
           T SLP P++ P P S +  +P      P+S               FI+Q  + E   + L
Sbjct: 8   TFSLPFPSQ-PLPFS-RQKHPYLLRATPTSVTDDVASTVYGAPSKFISQSHSPEWWIDLL 65

Query: 51  IYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
              +    +++A+ T   M   G  PD   +  LLK+    ++  LGK +H+ + +    
Sbjct: 66  RSKVRSNLLREAVLTYIDMIVLGIKPDNFAFPALLKAVADLQDMDLGKQIHAHVYKFGYG 125

Query: 111 PNSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            +SV + N+L++LY KCGD     K+F  + ++R+ VSW+S+ISS  +  K   A+  F 
Sbjct: 126 VDSVTVANTLVNLYRKCGDFGAVYKVFDRI-SERNQVSWNSLISSLCSFEKWEMALEAFR 184

Query: 170 EMLELGFCPNEYCFSAVIRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
            ML+    P+ +   +V  ACSN    E + +G  ++ + L+ G  +S +     L+ M+
Sbjct: 185 CMLDEDVEPSSFTLVSVALACSNFPMPEGLLMGKQVHAYGLRKGELNSFII--NTLVAMY 242

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K    L S+  +      ++ V W  +++   Q     +A+    +M+L G  PD FT+
Sbjct: 243 GKMG-KLASSKVLLGSFEGRDLVTWNTVLSSLCQNEQFLEALEYLREMVLEGVEPDGFTI 301

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           S V+ ACS LE+  +GK+LH++A++ G L  +  VG +LVDMY  C     V    +VFD
Sbjct: 302 SSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK---QVLSGCRVFD 358

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDS 404
            M D  +  W A+ITGY Q+   D+EA+ LF +M +   +  N  T A V+ AC      
Sbjct: 359 GMFDRKIGLWNAMITGYAQNE-YDEEALLLFIEMEESAGLLANSTTMAGVVPACVRSGAF 417

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
           +  E ++   VKRG   D  V N+L+ MY+R G+++ A++ F  + +++LV++NT++  Y
Sbjct: 418 SKKEAIHGFVVKRGLDRDRFVQNALMDMYSRLGKIDIAKRIFGKMEDRDLVTWNTIITGY 477

Query: 465 AKNLNSEKAFELLHEIE-----------DTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
             +   E A  +LH+++              +  ++ T  ++L   +++ A+ KG++IHA
Sbjct: 478 VFSERHEDALLMLHKMQILERKASERASRVSLKPNSITLMTILPSCAALSALAKGKEIHA 537

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
             IK+   ++  + +AL+ MY++C  ++ + +VF ++  RNVI+W  ++  +  HG +  
Sbjct: 538 YAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPIRNVITWNVIVMAYGMHGNSQD 597

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           A+++   M+  G+KPN +T+I+V +ACSH+G+++EG K F +M  ++G+    +HYAC+V
Sbjct: 598 AIDMLRMMMVQGVKPNEVTFISVFAACSHSGMVNEGLKIFYNMKKDYGVEPSSDHYACVV 657

Query: 634 DLLGRSGSLTEALEFIRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           DLLGR+G + EA + I  +P + D    W + LGACR+H + E+G+ AA+ +++ +P   
Sbjct: 658 DLLGRAGRVKEAYQLINLIPRNFDKAGAWSSLLGACRIHNNLEIGEIAAQNLIQLEPNVA 717

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
           + ++LL+N+Y+SAG W     +R+ MK + + KE GCSWIE  ++VHKF  G++SHP++ 
Sbjct: 718 SHYVLLANIYSSAGLWYKATEVRRNMKAQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSE 777

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           ++   L+ L  ++++ GY+PDT+ VLH +EE++K   L  HSEK+A+AFG+++TS    I
Sbjct: 778 KLRGYLETLWERMRKEGYIPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTII 837

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RV KNLRVC DCH A K+IS V  REI+LRD  RFHH K+G CSC DYW
Sbjct: 838 RVAKNLRVCNDCHLATKFISKVVDREIILRDVRRFHHFKNGTCSCGDYW 886


>gi|449453750|ref|XP_004144619.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
 gi|449506934|ref|XP_004162888.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Cucumis sativus]
          Length = 1067

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 302/799 (37%), Positives = 477/799 (59%), Gaps = 18/799 (2%)

Query: 73   GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR---SKLEPNSVILNSLISLYSKCGDL 129
            G  P+  T+  L+ +     N  L  L+  LLTR   S    +  + ++L+S ++K G +
Sbjct: 277  GLKPNEYTFGSLISATCSLANSGL-VLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSI 335

Query: 130  NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEY--CFSAV 186
              A  IF+ M + R++VS + +I   V + +  +A+ +F+EM + +   PN Y    +A 
Sbjct: 336  GYAKNIFQKM-SYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMIILTAF 394

Query: 187  IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
                        G  ++ FL++ G  ++ + +G  LI+M+ K G+++   A  VF  M  
Sbjct: 395  PEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAIN--DACVVFRLMDN 452

Query: 246  KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            K++V W  MIT   Q     +A++ F +M  +   P  FT+   +S+C+ L   + G+QL
Sbjct: 453  KDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQL 512

Query: 306  HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
            H   ++ GL LDV V  +L+ +Y +C   G V + +K F  MLD++ +SW ++I     S
Sbjct: 513  HCEGLKLGLDLDVSVSNALLALYGEC---GYVKECQKAFSLMLDYDHVSWNSLIGALADS 569

Query: 366  GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
                 EAV+ F  M++    PN  TF ++L A  +L    + +Q++   +KR  A D  +
Sbjct: 570  EPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAI 629

Query: 426  GNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
             N+L++ Y + G M      F  + ++ + VS+N+M+  Y  N    KA +++  +   G
Sbjct: 630  ENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKG 689

Query: 485  VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
                 +TFA++LS  +++  + +G ++H   +++  ES+  I +AL+ MY++C  ++ A 
Sbjct: 690  QRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSALVDMYAKCGRIDYAS 749

Query: 545  QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            + F+ M  RN+ SW SMI+G+A+HG   ++L++F +M   G  P+ +T++ VLSACSHAG
Sbjct: 750  RFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDHVTFVGVLSACSHAG 809

Query: 605  LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            L++EG+ HF SM + +G+  RMEH++CMVDLLGR G L +  +F+  MP+  +VL+WRT 
Sbjct: 810  LVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRVGELNKMEDFLNQMPVKPNVLIWRTV 869

Query: 665  LGA-CRVHG-DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
            LGA CR +G +T LG+ AAEM+LE +P +   +ILLSN+YAS G W+ VA  R  M++  
Sbjct: 870  LGACCRANGRNTALGRRAAEMLLEMEPTNAVNYILLSNMYASGGKWDDVAKTRVAMRKAF 929

Query: 723  LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
            + KEAGCSW+   + VH F  G+ SHP+   IY +L +L  K++  GY+P+T F L++LE
Sbjct: 930  VKKEAGCSWVTMKDGVHVFVAGDKSHPEKDLIYEKLKELNGKMRLAGYIPETRFALYDLE 989

Query: 783  EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
             E K + L  HSEKIAVAF L   SK  PIR+ KNLRVCGDCH+A KYIS +  R+IVLR
Sbjct: 990  GESKEELLSYHSEKIAVAFVLTRPSK-MPIRILKNLRVCGDCHSAFKYISQIVERQIVLR 1048

Query: 843  DSNRFHHIKDGKCSCNDYW 861
            DSNRFHH ++GKCSC D+W
Sbjct: 1049 DSNRFHHFENGKCSCGDFW 1067



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 189/670 (28%), Positives = 341/670 (50%), Gaps = 58/670 (8%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHL--GKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           M   G  P+   +  ++++C     + L  G  +H L+++++   +    N LIS+Y   
Sbjct: 165 MVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNA 224

Query: 127 -GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV----EMLELGFCPNEY 181
            G ++ A + F S+   R++VS +SMIS Y  RG  V A  +F     E++  G  PNEY
Sbjct: 225 LGMVDYARRAFDSIW-PRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEY 283

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLL----KCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
            F ++I A  +  N   G ++   LL    K G+   D+ VG AL+  F K GS+    A
Sbjct: 284 TFGSLISATCSLANS--GLVLLEQLLTRVEKSGFLH-DLYVGSALVSGFAKAGSIGY--A 338

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSE 295
             +F KM+ +N V    +I    +     +A+ LF++M  S  L P+ + +  +++A  E
Sbjct: 339 KNIFQKMSYRNVVSLNGLIIGLVRQKRGEEAVELFMEMKDSVELNPNSYMI--ILTAFPE 396

Query: 296 LELFTSGK----QLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
             +  +GK    ++H++ IR+GL    + +G  L++MYAKC   G+++D+  VF  M + 
Sbjct: 397 FHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKC---GAINDACVVFRLMDNK 453

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + ++W ++ITG  Q+  +  EAVK F +M + ++ P++FT  S L +C +L   +V EQ+
Sbjct: 454 DSVTWNSMITGLDQN-KQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQL 512

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   +K G  LD  V N+L+++Y   G +++ +KAF  + + + VS+N+++ A A +  S
Sbjct: 513 HCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGALADSEPS 572

Query: 471 E-KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A E    +   G   +  TF ++L+  SS+     G+QIHA ++K    ++  I NA
Sbjct: 573 MLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELGKQIHALVLKRNVAADTAIENA 632

Query: 530 LISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           L++ Y +C ++     +F  M DR + +SW SMI+G+  +    +A+++ + M+  G + 
Sbjct: 633 LLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRL 692

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC----------MVDLLGR 638
           +G T+  VLSAC+    +  G        + HG   R    AC          +VD+  +
Sbjct: 693 DGFTFATVLSACATVATLERG-------MEVHGCSVR----ACLESDIVIGSALVDMYAK 741

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA-HIL 697
            G +  A  F   MP + ++  W + +     HG    G  + ++  +   Q P   H+ 
Sbjct: 742 CGRIDYASRFFEMMP-ARNLYSWNSMISGYARHGH---GTKSLDLFAQMKLQGPLPDHVT 797

Query: 698 LSNLYASAGH 707
              + ++  H
Sbjct: 798 FVGVLSACSH 807



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 204/762 (26%), Positives = 332/762 (43%), Gaps = 87/762 (11%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  L ++    +  + N+LI++Y++ GDL    K+F  M   R++VSWS +IS Y    
Sbjct: 95  LHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEM-PLRNLVSWSCLISGYTRNR 153

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI--GHIIYGFLLKCGYFDSDVC 217
              +A  +F +M+  GF PN Y F +VIRAC       +  G  I+G + K  Y + DV 
Sbjct: 154 MPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVN-DVT 212

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM--- 274
               LI M+      ++ A + FD +  +N V    MI+   Q G    A  +F  M   
Sbjct: 213 ASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKE 272

Query: 275 -ILSGFLPDRFTLSGVVSA-CSELELFTSG----KQLHSWAIRTGLALDVCVGCSLVDMY 328
            +  G  P+ +T   ++SA CS   L  SG    +QL +   ++G   D+ VG +LV  +
Sbjct: 273 VMGDGLKPNEYTFGSLISATCS---LANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGF 329

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG-QVAPN 387
           AK    GS+  ++ +F +M   NV+S   +I G V+   R +EAV+LF +M    ++ PN
Sbjct: 330 AKA---GSIGYAKNIFQKMSYRNVVSLNGLIIGLVRQ-KRGEEAVELFMEMKDSVELNPN 385

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD---CVGNSLISMYARSGRMEDARK 444
            +          ++L++   +    HA      L +    +GN LI+MYA+ G + DA  
Sbjct: 386 SYMIILTAFPEFHVLENGKRKGSEVHAFLIRSGLLNAQIAIGNGLINMYAKCGAINDACV 445

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F  +  K+ V++N+M+    +N    +A +   E+  T +  S +T  S LS  +S+G 
Sbjct: 446 VFRLMDNKDSVTWNSMITGLDQNKQFLEAVKTFQEMRRTELYPSNFTMISALSSCASLGW 505

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           I  GEQ+H   +K G + +  + NAL+++Y  C  V+   + F  M D + +SW S+I  
Sbjct: 506 ISVGEQLHCEGLKLGLDLDVSVSNALLALYGECGYVKECQKAFSLMLDYDHVSWNSLIGA 565

Query: 565 FA-KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
            A        A+E F  M+  G  PN +T+I +L+A S   L   G K   ++  +  + 
Sbjct: 566 LADSEPSMLEAVESFLVMMRAGWDPNRVTFITILAAVSSLSLHELG-KQIHALVLKRNVA 624

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR--------------------- 662
                   ++   G+ G +         M    D + W                      
Sbjct: 625 ADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWF 684

Query: 663 --------------TFLGACRVHGDTELGKH----AAEMILEQDPQDPAAHILLSNLYAS 704
                         T L AC      E G      +    LE D    +A   L ++YA 
Sbjct: 685 MMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVRACLESDIVIGSA---LVDMYAK 741

Query: 705 AGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALK 764
            G  +Y +   + M  RNL      SW    N +   +       K+L+++A++      
Sbjct: 742 CGRIDYASRFFEMMPARNLY-----SW----NSMISGYARHGHGTKSLDLFAQM------ 786

Query: 765 IKEFGYLPD-TNF--VLHELEEEQKVQYLFQHSEKIAVAFGL 803
            K  G LPD   F  VL        V   F H + ++  +GL
Sbjct: 787 -KLQGPLPDHVTFVGVLSACSHAGLVNEGFSHFDSMSEIYGL 827



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 100/354 (28%), Positives = 175/354 (49%), Gaps = 49/354 (13%)

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           +DA  L L +  +GF+ D F  +                                   +L
Sbjct: 90  KDAEELHLQLFKNGFVNDLFLCN-----------------------------------TL 114

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           +++YA+    G +   RKVFD M   N++SW+ +I+GY ++     EA +LF  M+    
Sbjct: 115 INIYARV---GDLGSGRKVFDEMPLRNLVSWSCLISGYTRN-RMPNEACELFRKMVSDGF 170

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAV--KRGRALDDCVGNSLISMYARS-GRMED 441
            PNH+ F SV++AC    +  +   +  H +  K     D    N LISMY  + G ++ 
Sbjct: 171 MPNHYAFGSVIRACQECGEYGLKFGMQIHGLMSKTQYVNDVTASNVLISMYGNALGMVDY 230

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL----HEIEDTGVGTSAYTFASLLS 497
           AR+AF+S++ +NLVS N+M+  Y +  ++  AF++      E+   G+  + YTF SL+S
Sbjct: 231 ARRAFDSIWPRNLVSLNSMISVYCQRGDAVSAFDIFSTMQKEVMGDGLKPNEYTFGSLIS 290

Query: 498 GASSIGAIGKG--EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
              S+   G    EQ+  R+ KSGF  +  + +AL+S +++  ++  A  +F++M  RNV
Sbjct: 291 ATCSLANSGLVLLEQLLTRVEKSGFLHDLYVGSALVSGFAKAGSIGYAKNIFQKMSYRNV 350

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           +S   +I G  +      A+E+F +M  D ++ N  +Y+ +L+A     ++  G
Sbjct: 351 VSLNGLIIGLVRQKRGEEAVELFMEM-KDSVELNPNSYMIILTAFPEFHVLENG 403



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 100/341 (29%), Positives = 174/341 (51%), Gaps = 11/341 (3%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+ T   M +   +P   T    L SC       +G+ +H    +  L+ +  + N+L+
Sbjct: 473 EAVKTFQEMRRTELYPSNFTMISALSSCASLGWISVGEQLHCEGLKLGLDLDVSVSNALL 532

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN-RGKQVDAIHMFVEMLELGFCPN 179
           +LY +CG + E  K F  M +  D VSW+S+I +  +     ++A+  F+ M+  G+ PN
Sbjct: 533 ALYGECGYVKECQKAFSLMLD-YDHVSWNSLIGALADSEPSMLEAVESFLVMMRAGWDPN 591

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
              F  ++ A S+     +G  I+  +LK     +D  +  AL+  + K   D+     +
Sbjct: 592 RVTFITILAAVSSLSLHELGKQIHALVLKRN-VAADTAIENALLACYGKCG-DMGYCENI 649

Query: 240 FDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           F +M+++ + V W  MI+          A+ +   M+  G   D FT + V+SAC+ +  
Sbjct: 650 FSRMSDRQDEVSWNSMISGYIHNELLPKAMDMVWFMMQKGQRLDGFTFATVLSACATVAT 709

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G ++H  ++R  L  D+ +G +LVDMYAKC   G +D + + F+ M   N+ SW ++
Sbjct: 710 LERGMEVHGCSVRACLESDIVIGSALVDMYAKC---GRIDYASRFFEMMPARNLYSWNSM 766

Query: 359 ITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKAC 398
           I+GY + G   K ++ LF+ M +QG + P+H TF  VL AC
Sbjct: 767 ISGYARHGHGTK-SLDLFAQMKLQGPL-PDHVTFVGVLSAC 805



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 173/339 (51%), Gaps = 13/339 (3%)

Query: 48  NRLIYHLNDGR--VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH-LGKLVHSLL 104
           N LI  L D    + +A+ +  +M + G  P+  T+  +L + + S + H LGK +H+L+
Sbjct: 560 NSLIGALADSEPSMLEAVESFLVMMRAGWDPNRVTFITIL-AAVSSLSLHELGKQIHALV 618

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            +  +  ++ I N+L++ Y KCGD+     IF  M +++D VSW+SMIS Y++      A
Sbjct: 619 LKRNVAADTAIENALLACYGKCGDMGYCENIFSRMSDRQDEVSWNSMISGYIHNELLPKA 678

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           + M   M++ G   + + F+ V+ AC+    +  G  ++G  ++    +SD+ +G AL+D
Sbjct: 679 MDMVWFMMQKGQRLDGFTFATVLSACATVATLERGMEVHGCSVR-ACLESDIVIGSALVD 737

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           M+ K G +D  S  + F+ M  +N   W  MI+   + G    ++ LF  M L G LPD 
Sbjct: 738 MYAKCGRIDYAS--RFFEMMPARNLYSWNSMISGYARHGHGTKSLDLFAQMKLQGPLPDH 795

Query: 284 FTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            T  GV+SACS   L   G     S +   GLA  +     +VD+  +    G ++    
Sbjct: 796 VTFVGVLSACSHAGLVNEGFSHFDSMSEIYGLAPRMEHFSCMVDLLGRV---GELNKMED 852

Query: 343 VFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             ++M +  NV+ W  ++    ++ GR+    +  ++M+
Sbjct: 853 FLNQMPVKPNVLIWRTVLGACCRANGRNTALGRRAAEML 891



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 20/300 (6%)

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           +CG    S  AE+++    K G   D  + N+LI++YAR G +   RK F+ +  +NLVS
Sbjct: 86  SCG----SKDAEELHLQLFKNGFVNDLFLCNTLINIYARVGDLGSGRKVFDEMPLRNLVS 141

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK--GEQIHAR 514
           ++ ++  Y +N    +A EL  ++   G   + Y F S++      G  G   G QIH  
Sbjct: 142 WSCLISGYTRNRMPNEACELFRKMVSDGFMPNHYAFGSVIRACQECGEYGLKFGMQIHGL 201

Query: 515 IIKSGFESNHCIYNALISMYSRCAN-VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
           + K+ + ++    N LISMY      V+ A + F  +  RN++S  SMI+ + + G A  
Sbjct: 202 MSKTQYVNDVTASNVLISMYGNALGMVDYARRAFDSIWPRNLVSLNSMISVYCQRGDAVS 261

Query: 574 ALEIFYKM----LADGIKPNGITYIAVLSA-CS--HAGLISEGWKHFRSMYDEHGIVQRM 626
           A +IF  M    + DG+KPN  T+ +++SA CS  ++GL+    +   +  ++ G +  +
Sbjct: 262 AFDIFSTMQKEVMGDGLKPNEYTFGSLISATCSLANSGLVL--LEQLLTRVEKSGFLHDL 319

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
              + +V    ++GS+  A    + M     V +    +G  R     + G+ A E+ +E
Sbjct: 320 YVGSALVSGFAKAGSIGYAKNIFQKMSYRNVVSLNGLIIGLVR----QKRGEEAVELFME 375


>gi|42566761|ref|NP_193101.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635639|sp|Q9SVP7.2|PP307_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g13650
 gi|332657909|gb|AEE83309.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1064

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 279/789 (35%), Positives = 461/789 (58%), Gaps = 7/789 (0%)

Query: 73   GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
            G  P    +S +L +C +  +  +G+ +H L+ +     ++ + N+L+SLY   G+L  A
Sbjct: 283  GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342

Query: 133  NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
              IF +M ++RD V+++++I+     G    A+ +F  M   G  P+    ++++ ACS 
Sbjct: 343  EHIFSNM-SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401

Query: 193  TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
               +  G  ++ +  K G+  ++   G AL++++ K   D+E+A   F +   +N V W 
Sbjct: 402  DGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAK-CADIETALDYFLETEVENVVLWN 459

Query: 253  LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +M+     L   R++ R+F  M +   +P+++T   ++  C  L     G+Q+HS  I+T
Sbjct: 460  VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519

Query: 313  GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
               L+  V   L+DMYAK    G +D +  +  R    +V+SWT +I GY Q    DK A
Sbjct: 520  NFQLNAYVCSVLIDMYAKL---GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK-A 575

Query: 373  VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
            +  F  M+   +  +     + + AC  L      +Q++  A   G + D    N+L+++
Sbjct: 576  LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635

Query: 433  YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
            Y+R G++E++  AFE     + +++N +V  + ++ N+E+A  +   +   G+  + +TF
Sbjct: 636  YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695

Query: 493  ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
             S +  AS    + +G+Q+HA I K+G++S   + NALISMY++C ++  A + F E+  
Sbjct: 696  GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755

Query: 553  RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            +N +SW ++I  ++KHGF + AL+ F +M+   ++PN +T + VLSACSH GL+ +G  +
Sbjct: 756  KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815

Query: 613  FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            F SM  E+G+  + EHY C+VD+L R+G L+ A EFI+ MP+  D LVWRT L AC VH 
Sbjct: 816  FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875

Query: 673  DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
            + E+G+ AA  +LE +P+D A ++LLSNLYA +  W+     R++MKE+ + KE G SWI
Sbjct: 876  NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935

Query: 733  EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
            E  N +H F+VG+ +HP   EI+     L  +  E GY+ D   +L+EL+ EQK   +F 
Sbjct: 936  EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 995

Query: 793  HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
            HSEK+A++FGL+S   + PI V KNLRVC DCH  IK++S V+ REI++RD+ RFHH + 
Sbjct: 996  HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1055

Query: 853  GKCSCNDYW 861
            G CSC DYW
Sbjct: 1056 GACSCKDYW 1064



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 181/632 (28%), Positives = 324/632 (51%), Gaps = 21/632 (3%)

Query: 48  NRLIYHLNDGRVQKAIFTLDL-MTQKGNHPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLT 105
           N++I  L    +   +F L + M  +   P+  T+S +L++C   S  F + + +H+ + 
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
              L  ++V+ N LI LYS+ G ++ A ++F  +   +D  SW +MIS       + +AI
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RLKDHSSWVAMISGLSKNECEAEAI 273

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F +M  LG  P  Y FS+V+ AC   E++ IG  ++G +LK G F SD  V  AL+ +
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSL 332

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           +     +L SA  +F  M++++ V +  +I   +Q G    A+ LF  M L G  PD  T
Sbjct: 333 YFHLG-NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L+ +V ACS       G+QLH++  + G A +  +  +L+++YAKC       D     D
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA------DIETALD 445

Query: 346 RMLD---HNVMSWTAIITGYVQSGGRD--KEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             L+    NV+ W  ++  Y   G  D  + + ++F  M   ++ PN +T+ S+LK C  
Sbjct: 446 YFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L D  + EQ+++  +K    L+  V + LI MYA+ G+++ A         K++VS+ TM
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +  Y +    +KA     ++ D G+ +      + +S  + + A+ +G+QIHA+   SGF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            S+    NAL+++YSRC  +E ++  F++ E  + I+W ++++GF + G    AL +F +
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M  +GI  N  T+ + + A S    + +G K   ++  + G     E    ++ +  + G
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCG 741

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           S+++A +    +    +V  W   + A   HG
Sbjct: 742 SISDAEKQFLEVSTKNEV-SWNAIINAYSKHG 772



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 177/618 (28%), Positives = 312/618 (50%), Gaps = 23/618 (3%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
           +D +  +G  P+  T   LL+ C+++  +   G+ +HS + +  L+ N  +   L   Y 
Sbjct: 72  IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
             GDL  A K+F  M  +R I +W+ MI    +R    +   +FV M+     PNE  FS
Sbjct: 132 FKGDLYGAFKVFDEMP-ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190

Query: 185 AVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
            V+ AC    +VA   +  I+  +L  G  DS V V   LID++ + G VDL  A +VFD
Sbjct: 191 GVLEACRGG-SVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDL--ARRVFD 246

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            +  K+   W  MI+  ++  C  +AIRLF DM + G +P  +  S V+SAC ++E    
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+QLH   ++ G + D  V  +LV +Y      G++  +  +F  M   + +++  +I G
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHL---GNLISAEHIFSNMSQRDAVTYNTLING 363

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRG 418
             Q G  +K A++LF  M    + P+  T AS++ AC   G L      +Q++ +  K G
Sbjct: 364 LSQCGYGEK-AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR---GQQLHAYTTKLG 419

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
            A ++ +  +L+++YA+   +E A   F     +N+V +N M+ AY    +   +F +  
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +++   +  + YT+ S+L     +G +  GEQIH++IIK+ F+ N  + + LI MY++  
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            ++ A+ +      ++V+SWT+MI G+ ++ F  +AL  F +ML  GI+ + +     +S
Sbjct: 540 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 599

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEFIRSMPLSAD 657
           AC+    + EG +   +     G    +     +V L  R G + E+ L F ++   + D
Sbjct: 600 ACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE--AGD 656

Query: 658 VLVWRTFLGACRVHGDTE 675
            + W   +   +  G+ E
Sbjct: 657 NIAWNALVSGFQQSGNNE 674


>gi|356558231|ref|XP_003547411.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
            chloroplastic-like [Glycine max]
          Length = 1135

 Score =  548 bits (1413), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 306/814 (37%), Positives = 474/814 (58%), Gaps = 42/814 (5%)

Query: 80   TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--VILNSLISLYSKCGDLNEANKIFK 137
             +  +LK+     +  LGK +H+ + +    P S   + NSL+++Y KCGDL  A ++F 
Sbjct: 332  AFPAVLKAAAAVHDLCLGKQIHAHVFKFGHAPPSSVAVANSLVNMYGKCGDLTAARQVFD 391

Query: 138  SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN-V 196
             + + RD VSW+SMI++     +   ++H+F  ML     P  +   +V  ACS+    V
Sbjct: 392  DIPD-RDHVSWNSMIATLCRFEEWELSLHLFRLMLSENVDPTSFTLVSVAHACSHVRGGV 450

Query: 197  AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV-DLESAYKVFDKMTEKNTVGWTLM 254
             +G  ++ + L+ G  D       AL+ M+ + G V D ++ + VFD    K+ V W  +
Sbjct: 451  RLGKQVHAYTLRNG--DLRTYTNNALVTMYARLGRVNDAKALFGVFDG---KDLVSWNTV 505

Query: 255  ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG- 313
            I+  +Q     +A+     MI+ G  PD  TL+ V+ ACS+LE    G+++H +A+R G 
Sbjct: 506  ISSLSQNDRFEEALMYVYLMIVDGVRPDGVTLASVLPACSQLERLRIGREIHCYALRNGD 565

Query: 314  LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
            L  +  VG +LVDMY  C         R VFD ++   V  W A++ GY ++   D +A+
Sbjct: 566  LIENSFVGTALVDMYCNCK---QPKKGRLVFDGVVRRTVAVWNALLAGYARNE-FDDQAL 621

Query: 374  KLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
            +LF +MI + +  PN  TFASVL AC      +  E ++ + VKRG   D  V N+L+ M
Sbjct: 622  RLFVEMISESEFCPNATTFASVLPACVRCKVFSDKEGIHGYIVKRGFGKDKYVQNALMDM 681

Query: 433  YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE----------- 481
            Y+R GR+E ++  F  + ++++VS+NTM+         + A  LLHE++           
Sbjct: 682  YSRMGRVEISKTIFGRMNKRDIVSWNTMITGCIVCGRYDDALNLLHEMQRRQGEDGSDTF 741

Query: 482  -----DTGV--GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
                 D GV    ++ T  ++L G +++ A+GKG++IHA  +K     +  + +AL+ MY
Sbjct: 742  VDYEDDGGVPFKPNSVTLMTVLPGCAALAALGKGKEIHAYAVKQKLAMDVAVGSALVDMY 801

Query: 535  SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG------IKP 588
            ++C  +  A +VF +M  RNVI+W  +I  +  HG    ALE+F  M A G      I+P
Sbjct: 802  AKCGCLNLASRVFDQMPIRNVITWNVLIMAYGMHGKGEEALELFRIMTAGGGSNREVIRP 861

Query: 589  NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
            N +TYIA+ +ACSH+G++ EG   F +M   HG+  R +HYAC+VDLLGRSG + EA E 
Sbjct: 862  NEVTYIAIFAACSHSGMVDEGLHLFHTMKASHGVEPRGDHYACLVDLLGRSGRVKEAYEL 921

Query: 649  IRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I +MP + + V  W + LGACR+H   E G+ AA+ +   +P   + ++L+SN+Y+SAG 
Sbjct: 922  INTMPSNLNKVDAWSSLLGACRIHQSVEFGEIAAKHLFVLEPNVASHYVLMSNIYSSAGL 981

Query: 708  WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
            W+    +RK+MKE  + KE GCSWIE  ++VHKF  G+ SHP++ E++  L+ L+ ++++
Sbjct: 982  WDQALGVRKKMKEMGVRKEPGCSWIEHGDEVHKFLSGDASHPQSKELHEYLETLSQRMRK 1041

Query: 768  FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
             GY+PD + VLH +++E+K   L  HSE++A+AFGL++T     IRV KNLRVC DCH A
Sbjct: 1042 EGYVPDISCVLHNVDDEEKETMLCGHSERLAIAFGLLNTPPGTTIRVAKNLRVCNDCHVA 1101

Query: 828  IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K IS +  REI+LRD  RFHH  +G CSC DYW
Sbjct: 1102 TKIISKIVDREIILRDVRRFHHFANGTCSCGDYW 1135


>gi|297822535|ref|XP_002879150.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324989|gb|EFH55409.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 872

 Score =  548 bits (1412), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 294/821 (35%), Positives = 482/821 (58%), Gaps = 14/821 (1%)

Query: 44  EPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSL 103
           E  ++ L     DGR Q+A      +   G   D   +S +LK      +   G+ +H  
Sbjct: 63  ESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQ 122

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
             +     +  +  SL+  Y K  +  +   +F  M  +R++V+W+++IS Y       +
Sbjct: 123 CIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEM-KERNVVTWTTLISGYARNSLNEE 181

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
            + +F+ M + G  PN + F+A +   +       G  ++  ++K G  D  + V  +LI
Sbjct: 182 VLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG-LDKTIPVSNSLI 240

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           ++++K   ++  A  +FDK   K+ V W  MI+     G   +A+ +F  M L+      
Sbjct: 241 NLYLKCG-NVRKARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNHVRLSE 299

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            + + ++  C+ L+     +QLH   ++ G   D  +  +L+  Y+KC    ++ D+ ++
Sbjct: 300 SSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQNIRTALMVAYSKCM---AMLDALRL 356

Query: 344 FDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           F       NV+SWTA+I+G++Q+ G++ EAV LFS+M +  V PN FT++ +L A   + 
Sbjct: 357 FKETGFLGNVVSWTAMISGFLQNDGKE-EAVGLFSEMKRKGVRPNEFTYSVILTALPVIS 415

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
            S V  QV    VK        VG +L+  Y + G++++A K F  +  K++V+++ M+ 
Sbjct: 416 PSEVHAQV----VKTNYERSSTVGTALLDAYVKLGKVDEAAKVFSGIDNKDIVAWSAMLA 471

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS-GASSIGAIGKGEQIHARIIKSGFE 521
            YA+   +E A ++  E+   GV  + +TF+S+L+  A++  ++G+G+Q H   IKS  +
Sbjct: 472 GYAQAGETEAAIKIFSELTKGGVKPNEFTFSSILNVCAATTASMGQGKQFHGFAIKSRLD 531

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           S+ C+ +AL++MY++  ++E+A +VFK   +++++SW SMI+G+A+HG A +AL++F +M
Sbjct: 532 SSLCVSSALLTMYAKKGHIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEM 591

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
               +K + +T+I V +AC+HAGL+ EG K+F  M  +  I    EH +CMVDL  R+G 
Sbjct: 592 KKRKVKMDSVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQ 651

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
           L +A++ I +MP  A   +WRT L ACRVH  TELG+ AAE I+   P+D AA++LLSN+
Sbjct: 652 LEKAMKVIDNMPNLAGSTIWRTILAACRVHKKTELGRLAAEKIIAMIPEDSAAYVLLSNM 711

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           YA +G W+  A +RK M ERN+ KE G SWIE  NK + F  G+ SHP   +IY +L+ L
Sbjct: 712 YAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYAFLAGDRSHPLKDQIYMKLEDL 771

Query: 762 ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVC 821
           + ++K+ GY PDT++VL ++++E K   L QHSE++A+AFGLI+T K  P+ + KNLRVC
Sbjct: 772 STRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVC 831

Query: 822 GDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
           GDCH  IK I+ +  REIV+RDSNRFHH   DG CSC D+W
Sbjct: 832 GDCHVVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 872



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 164/589 (27%), Positives = 276/589 (46%), Gaps = 75/589 (12%)

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  L  A+ +FDK  +++   +T ++   ++ G  ++A RLFL++   G   D    S V
Sbjct: 44  SSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFSSV 103

Query: 290 VSACSEL--ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           +   + L  ELF  G+QLH   I+ G   DV VG SLVD Y K +   +  D R VFD M
Sbjct: 104 LKVSATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS---NFKDGRNVFDEM 158

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            + NV++WT +I+GY ++   ++E + LF  M      PN FTFA+ L   G L +  V 
Sbjct: 159 KERNVVTWTTLISGYARN-SLNEEVLTLFMRMQDEGTQPNSFTFAAAL---GVLAEEGVG 214

Query: 408 E---QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
               QV+T  VK G      V NSLI++Y + G +  AR  F+    K++V++N+M+  Y
Sbjct: 215 GRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKSVVTWNSMISGY 274

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           A N    +A  + + +    V  S  +FAS++   +++  +   EQ+H  ++K GF  + 
Sbjct: 275 AANGLDLEALGMFYSMRLNHVRLSESSFASIIKLCANLKELRFTEQLHCSVVKYGFVFDQ 334

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLA 583
            I  AL+  YS+C  +  A ++FKE     NV+SWT+MI+GF ++     A+ +F +M  
Sbjct: 335 NIRTALMVAYSKCMAMLDALRLFKETGFLGNVVSWTAMISGFLQNDGKEEAVGLFSEMKR 394

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKH---FRSMYDEHGIVQRMEHYACMVDLLGRSG 640
            G++PN  TY  +L+A     +IS    H    ++ Y+    V        ++D   + G
Sbjct: 395 KGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG-----TALLDAYVKLG 446

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE------------------------- 675
            + EA +    +  + D++ W   L      G+TE                         
Sbjct: 447 KVDEAAKVFSGID-NKDIVAWSAMLAGYAQAGETEAAIKIFSELTKGGVKPNEFTFSSIL 505

Query: 676 ---------LGK----HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
                    +G+    H   +    D     +  LL+ +YA  GH E    + KR +E++
Sbjct: 506 NVCAATTASMGQGKQFHGFAIKSRLDSSLCVSSALLT-MYAKKGHIESAEEVFKRQREKD 564

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           L+     SW    N +   +       K L+++ E+ +  +K+    ++
Sbjct: 565 LV-----SW----NSMISGYAQHGQAMKALDVFKEMKKRKVKMDSVTFI 604



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 124/239 (51%), Gaps = 2/239 (0%)

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A S R+  A   F+   +++  SY +++  ++++  +++A  L   I+  G+      F+
Sbjct: 42  ASSSRLYYAHNLFDKSPDRDRESYTSLLFGFSRDGRTQEATRLFLNIQHLGMEMDCSIFS 101

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+L  ++++     G Q+H + IK GF  +  +  +L+  Y + +N +    VF EM++R
Sbjct: 102 SVLKVSATLCDELFGRQLHCQCIKFGFLDDVSVGTSLVDTYMKGSNFKDGRNVFDEMKER 161

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           NV++WT++I+G+A++      L +F +M  +G +PN  T+ A L   +  G+   G +  
Sbjct: 162 NVVTWTTLISGYARNSLNEEVLTLFMRMQDEGTQPNSFTFAAALGVLAEEGVGGRGLQ-V 220

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            ++  ++G+ + +     +++L  + G++ +A        + + V+ W + +     +G
Sbjct: 221 HTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTEVKS-VVTWNSMISGYAANG 278


>gi|359494657|ref|XP_002264130.2| PREDICTED: pentatricopeptide repeat-containing protein At4g13650-like
            [Vitis vinifera]
          Length = 1724

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 294/796 (36%), Positives = 473/796 (59%), Gaps = 12/796 (1%)

Query: 69   MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
            M Q+G   + +T++ +  SC    +  LG  V   + +   E +  + NSLIS++S    
Sbjct: 938  MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 997

Query: 129  LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
            + EA  +F  M N+ DI+SW++MIS+Y + G   +++  F  M  L    N    S+++ 
Sbjct: 998  VEEACYVFDHM-NECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 1056

Query: 189  ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
             CS+ +N+  G  I+G ++K G  DS+VC+   L+ ++ +     E A  VF  MTE++ 
Sbjct: 1057 VCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEAGRS-EDAELVFQAMTERDL 1114

Query: 249  VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
            + W  M+    Q G   D +++  +++  G + +  T +  ++ACS  E     K +H+ 
Sbjct: 1115 ISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASALAACSNPECLIESKIVHAL 1174

Query: 309  AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
             I  G    + VG +LV MY K    G + +++KV   M   + ++W A+I G+ ++   
Sbjct: 1175 IIVAGFHDFLIVGNALVTMYGKL---GMMMEAKKVLQTMPQPDRVTWNALIGGHAENE-E 1230

Query: 369  DKEAVKLFSDMIQGQVAPNHFTFASVLKACG---NLLDSNVAEQVYTHAVKRGRALDDCV 425
              EAVK +  + +  +  N+ T  SVL AC    +LL   +   ++ H V  G   DD V
Sbjct: 1231 PNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGMP--IHAHIVLTGFESDDYV 1288

Query: 426  GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
             NSLI+MYA+ G +  +   F+ L  K+ +++N MV A A +   E+A ++  E+ + GV
Sbjct: 1289 KNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAHHGCGEEALKIFGEMRNVGV 1348

Query: 486  GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
                ++F+  L+  +++  + +G+Q+H  +IK GFES+  + NA + MY +C  +    +
Sbjct: 1349 NLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLK 1408

Query: 546  VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
            +  +  +R+ +SW  +I+ FA+HG   +A E F++ML  G KP+ +T++++LSAC+H GL
Sbjct: 1409 MLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGL 1468

Query: 606  ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
            + EG  ++ SM  E G+   +EH  C++DLLGRSG L+ A  FI+ MP+  + L WR+ L
Sbjct: 1469 VDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLL 1528

Query: 666  GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
             ACR+HG+ EL +  AE +LE DP D +A++L SN+ A++G WE V N+RK M   N+ K
Sbjct: 1529 AACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKK 1588

Query: 726  EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
            +  CSW++  +KVH F +GE  HP+   I A+L +L    KE GY+PDT+F LH+++EEQ
Sbjct: 1589 QPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQ 1648

Query: 786  KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
            K   L+ HSE++A+AFGLI+T +S  +R+FKNLRVCGDCH+  K++S + GR+IVLRD  
Sbjct: 1649 KEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPY 1708

Query: 846  RFHHIKDGKCSCNDYW 861
            RFHH   GKCSC DYW
Sbjct: 1709 RFHHFSGGKCSCGDYW 1724



 Score =  325 bits (833), Expect = 6e-86,   Method: Compositional matrix adjust.
 Identities = 183/553 (33%), Positives = 308/553 (55%), Gaps = 7/553 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++ C + +    GH+I+  L+  G F SD+ +   LI  +VK   D+ +A  VFD M E
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNG-FGSDLHLNTKLIIFYVKVG-DVIAARNVFDGMPE 93

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++ V WT M++  +Q G    A  LF DM   G   ++FT    + AC+ L     G Q+
Sbjct: 94  RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANQFTYGSALRACTSLRCLDMGIQV 153

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
                +     ++ V  +LVD ++KC   G ++D+  +F  M++ +V+SW A+I GY   
Sbjct: 154 QGCIQKGRFVENLFVKSALVDFHSKC---GKMEDASYLFGTMMERDVVSWNAMIGGYAVQ 210

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G  D ++  +F  M++G + P+ +T  SVL+A        +A Q++    + G    D V
Sbjct: 211 GFAD-DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIV 269

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA-KNLNSEKAFELLHEIEDTG 484
              LI+ YA++G +  A+   + + +K+L S   ++  YA + + S  A +L  E+    
Sbjct: 270 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYSVDALDLFKEMNQMN 329

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +G       S+L+  +++ +   G QIHA  +K     +  + NALI MY++   +E A 
Sbjct: 330 IGMDDVILCSMLNICANLASFALGTQIHAFALKYQPSYDVAMGNALIDMYAKSGEIEDAK 389

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           + F EME++NVISWTS+I+G+AKHG+   A+ ++ KM + G KPN +T++++L ACSH G
Sbjct: 390 RAFDEMEEKNVISWTSLISGYAKHGYGHMAVSLYKKMESKGFKPNDVTFLSLLFACSHTG 449

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L +EG + F +M +++ I  R EHY+CMVDL  R G L EA   +  + +  +  +W   
Sbjct: 450 LTAEGCECFNNMVNKYNIKPRAEHYSCMVDLFARQGLLEEAYNLLCKIDIKHNASLWGAI 509

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           LGA  ++G   LGK AA  +    P++   +++L+++Y++AG W+    IRK M+ER+  
Sbjct: 510 LGASSIYGYMSLGKEAASNLFNMQPENSVNYVVLASIYSAAGLWDDAWKIRKLMEERSTK 569

Query: 725 KEAGCSWIEADNK 737
           K AG S+ +A  K
Sbjct: 570 KNAGYSFFQATKK 582



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 161/569 (28%), Positives = 284/569 (49%), Gaps = 17/569 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N GR+ +A   L L++      D   Y  +L+ CI  +    G L+H+ L  +    +  
Sbjct: 10  NLGRLAEA---LKLLSSNPTRLDPSLYLKILQLCIDKKAKKQGHLIHTHLITNGFGSDLH 66

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +   LI  Y K GD+  A  +F  M  +R +VSW++M+S Y   G+   A  +F +M   
Sbjct: 67  LNTKLIIFYVKVGDVIAARNVFDGM-PERSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHC 125

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G   N++ + + +RAC++   + +G  + G + K G F  ++ V  AL+D   K    +E
Sbjct: 126 GVKANQFTYGSALRACTSLRCLDMGIQVQGCIQK-GRFVENLFVKSALVDFHSKCG-KME 183

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +F  M E++ V W  MI      G   D+  +F  M+  G +PD +TL  V+ A +
Sbjct: 184 DASYLFGTMMERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGLVPDCYTLGSVLRASA 243

Query: 295 ELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           E        Q+H    + G  + D+  G  L++ YAK   +GS+  ++ +   ML  ++ 
Sbjct: 244 EGGGLIIANQIHGIITQLGYGSYDIVTGL-LINAYAK---NGSLRSAKDLRKGMLKKDLF 299

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           S TA+ITGY   G    +A+ LF +M Q  +  +     S+L  C NL    +  Q++  
Sbjct: 300 SSTALITGYAHEGIYSVDALDLFKEMNQMNIGMDDVILCSMLNICANLASFALGTQIHAF 359

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           A+K   + D  +GN+LI MYA+SG +EDA++AF+ + EKN++S+ +++  YAK+     A
Sbjct: 360 ALKYQPSYDVAMGNALIDMYAKSGEIEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMA 419

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALIS 532
             L  ++E  G   +  TF SLL   S  G   +G E  +  + K   +     Y+ ++ 
Sbjct: 420 VSLYKKMESKGFKPNDVTFLSLLFACSHTGLTAEGCECFNNMVNKYNIKPRAEHYSCMVD 479

Query: 533 MYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKP-NG 590
           +++R   +E A+ +  +++ + N   W +++   + +G+ +   E    +    ++P N 
Sbjct: 480 LFARQGLLEEAYNLLCKIDIKHNASLWGAILGASSIYGYMSLGKEAASNLF--NMQPENS 537

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           + Y+ + S  S AGL  + WK  R + +E
Sbjct: 538 VNYVVLASIYSAAGLWDDAWK-IRKLMEE 565



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 156/527 (29%), Positives = 279/527 (52%), Gaps = 21/527 (3%)

Query: 88   CIRSRNFHL-----------GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
            C+ + NF L           GK +H+      +       N+LI++YSK G++  A  +F
Sbjct: 743  CLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 802

Query: 137  KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
              M   R+  SWS+M+S YV  G   +A+ +F +M  LG  PN +  +++I ACS +  +
Sbjct: 803  DEM-RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 861

Query: 197  AI-GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL-ESAYKVFDKMTEKNTVGWTLM 254
            A  G  ++GF++K G    DV VG AL+  +  GS+ L  +A K+F++M + N V WT +
Sbjct: 862  ADEGFQVHGFVVKTGIL-GDVYVGTALVHFY--GSIGLVYNAQKLFEEMPDHNVVSWTSL 918

Query: 255  ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
            +   +  G P + + ++  M   G   ++ T + V S+C  LE    G Q+    I+ G 
Sbjct: 919  MVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGF 978

Query: 315  ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
               V V  SL+ M++  +   SV+++  VFD M + +++SW A+I+ Y    G  +E+++
Sbjct: 979  EDSVSVANSLISMFSSFS---SVEEACYVFDHMNECDIISWNAMISAYAHH-GLCRESLR 1034

Query: 375  LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
             F  M       N  T +S+L  C ++ +      ++   VK G   + C+ N+L+++Y+
Sbjct: 1035 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 1094

Query: 435  RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
             +GR EDA   F+++ E++L+S+N+M+  Y ++       ++L E+   G   +  TFAS
Sbjct: 1095 EAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 1154

Query: 495  LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
             L+  S+   + + + +HA II +GF     + NAL++MY +   +  A +V + M   +
Sbjct: 1155 ALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPD 1214

Query: 555  VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
             ++W ++I G A++     A++ +  +   GI  N IT ++VL ACS
Sbjct: 1215 RVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 1261



 Score = 83.2 bits (204), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L G S I +   G+ +HA  I           N LI+MYS+  N+E A  VF EM  RN 
Sbjct: 751 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 810

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
            SW++M++G+ + G    A+ +F +M   G++PNG    ++++ACS +G +++       
Sbjct: 811 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 870

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
              + GI+  +     +V   G  G +  A +    MP   +V+ W + +
Sbjct: 871 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 919


>gi|449468888|ref|XP_004152153.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
 gi|449515059|ref|XP_004164567.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Cucumis sativus]
          Length = 721

 Score =  547 bits (1410), Expect = e-153,   Method: Compositional matrix adjust.
 Identities = 275/721 (38%), Positives = 450/721 (62%), Gaps = 8/721 (1%)

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R+ VS+ ++I  Y    K ++A  +F  +   G   N + F+ V++   + E   +G I
Sbjct: 8   ERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEWAELGRI 67

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++G +LK GY  S+  +G ALID + V G V +  A +VFD+++ K+ V WT MI    +
Sbjct: 68  VHGCVLKVGY-GSNTFIGTALIDAYSVSGCVSM--AREVFDEISSKDMVSWTGMIASYAE 124

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
             C  +A+  F  M ++GF P+ FT +GV+ AC  L+ F +GK +H   ++T    D+ V
Sbjct: 125 NDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYV 184

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           G  L+++Y +C   G  DD+ + F  M  ++V+ W+ +I+ + QSG  +K A+++F  M 
Sbjct: 185 GVGLLELYTRC---GDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEK-ALEIFCQMR 240

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +  V PN FTF+SVL+A  ++   ++++ ++ HA+K G + D  V N+L++ YA+ G +E
Sbjct: 241 RAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCGCIE 300

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            + + FE+L ++N VS+NT++ +Y +  + E+A  L   +    V  +  T++S+L   +
Sbjct: 301 QSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACA 360

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++ A+  G Q+H    K+ +  +  + NALI MY++C +++ A  +F  ++ R+ +SW +
Sbjct: 361 TLAALELGLQVHCLTAKTIYGQDVAVGNALIDMYAKCGSIKDARFMFDMLDLRDKVSWNA 420

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I G++ HG    A+++F  M     KP+ +T++ VLSACS+ G + EG ++F SM  ++
Sbjct: 421 IICGYSMHGLGVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFTSMKQDY 480

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI   MEHY CMV L+GRSG+L +A++FI  +P    V++WR  LGAC +H D ELG+ +
Sbjct: 481 GIEPCMEHYTCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGACVIHNDVELGRIS 540

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +LE +P+D A+H+LLSN+YA A  W  VA +RK MK + + KE G SWIE    VH 
Sbjct: 541 AQRVLELEPRDEASHVLLSNIYARARRWGNVAYVRKHMKRKGVKKEPGLSWIENQGNVHC 600

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F V +TSH     I   L+ L +K ++ GY P  N VL ++E+++K + L+ HSE++A+A
Sbjct: 601 FTVADTSHADLKLINGMLEFLNMKTRKAGYSPQLNAVLLDVEDDEKERLLWLHSERLALA 660

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGL+      PIR+ KNLR+C DCH+ IK IS + GR+I++RD NRFHH ++G CSC DY
Sbjct: 661 FGLVRMPAGCPIRIIKNLRICVDCHSVIKLISKIVGRDIIVRDMNRFHHFENGSCSCADY 720

Query: 861 W 861
           W
Sbjct: 721 W 721



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/500 (29%), Positives = 270/500 (54%), Gaps = 11/500 (2%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           +G+  +   ++ +LK  +      LG++VH  + +     N+ I  +LI  YS  G ++ 
Sbjct: 40  EGHELNPFVFTTVLKLLVSMEWAELGRIVHGCVLKVGYGSNTFIGTALIDAYSVSGCVSM 99

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A ++F  + +K D+VSW+ MI+SY       +A+  F +M   GF PN + F+ V++AC 
Sbjct: 100 AREVFDEISSK-DMVSWTGMIASYAENDCFSEALEFFSQMRVAGFKPNNFTFAGVLKACL 158

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
             +N   G  ++  +LK  Y + D+ VG  L++++ +   D + A++ F  M + + + W
Sbjct: 159 GLQNFDAGKTVHCSVLKTNY-ERDLYVGVGLLELYTRCG-DNDDAWRAFGDMPKNDVIPW 216

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
           + MI+R  Q G    A+ +F  M  +  +P++FT S V+ A +++E     K +H  A++
Sbjct: 217 SFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALK 276

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            GL+ DV V  +L+  YAKC   G ++ S ++F+ + D N +SW  II  YVQ G  ++ 
Sbjct: 277 AGLSTDVFVSNALMACYAKC---GCIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGER- 332

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A+ LFS+M++ QV     T++S+L+AC  L    +  QV+    K     D  VGN+LI 
Sbjct: 333 ALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIYGQDVAVGNALID 392

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYA+ G ++DAR  F+ L  ++ VS+N ++  Y+ +    +A ++ + +++T       T
Sbjct: 393 MYAKCGSIKDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDELT 452

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKE 549
           F  +LS  S+ G + +G+Q     +K  +    C+  Y  ++ +  R  N++ A +  ++
Sbjct: 453 FVGVLSACSNTGRLDEGKQYFTS-MKQDYGIEPCMEHYTCMVWLMGRSGNLDQAVKFIED 511

Query: 550 ME-DRNVISWTSMITGFAKH 568
           +  + +V+ W +++     H
Sbjct: 512 IPFEPSVMIWRALLGACVIH 531



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 125/398 (31%), Positives = 218/398 (54%), Gaps = 11/398 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T++ +LK+C+  +NF  GK VH  + ++  E +  +   L+ LY++CGD
Sbjct: 138 MRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTNYERDLYVGVGLLELYTRCGD 197

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
            ++A + F  M  K D++ WS MIS +   G+   A+ +F +M      PN++ FS+V++
Sbjct: 198 NDDAWRAFGDM-PKNDVIPWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQ 256

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           A ++ E++ +   I+G  LK G   +DV V  AL+  + K    +E + ++F+ ++++N 
Sbjct: 257 ASADIESLDLSKTIHGHALKAG-LSTDVFVSNALMACYAKCGC-IEQSMELFEALSDRND 314

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  +I    QLG    A+ LF +M+         T S ++ AC+ L     G Q+H  
Sbjct: 315 VSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCL 374

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
             +T    DV VG +L+DMYAKC   GS+ D+R +FD +   + +SW AII GY    G 
Sbjct: 375 TAKTIYGQDVAVGNALIDMYAKC---GSIKDARFMFDMLDLRDKVSWNAIICGYSMH-GL 430

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN- 427
             EA+K+F+ M + +  P+  TF  VL AC N    +  +Q +T ++K+   ++ C+ + 
Sbjct: 431 GVEAIKMFNLMKETKCKPDELTFVGVLSACSNTGRLDEGKQYFT-SMKQDYGIEPCMEHY 489

Query: 428 -SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
             ++ +  RSG ++ A K  E + FE +++ +  ++ A
Sbjct: 490 TCMVWLMGRSGNLDQAVKFIEDIPFEPSVMIWRALLGA 527



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 126/446 (28%), Positives = 232/446 (52%), Gaps = 11/446 (2%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VFD+M E+NTV +  +I    Q     +A  LF  +   G   + F  + V+     +E 
Sbjct: 2   VFDEMPERNTVSFVTLIHGYAQSNKFIEAFELFARLHGEGHELNPFVFTTVLKLLVSMEW 61

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G+ +H   ++ G   +  +G +L+D Y   +V G V  +R+VFD +   +++SWT +
Sbjct: 62  AELGRIVHGCVLKVGYGSNTFIGTALIDAY---SVSGCVSMAREVFDEISSKDMVSWTGM 118

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I  Y ++     EA++ FS M      PN+FTFA VLKAC  L + +  + V+   +K  
Sbjct: 119 IASYAENDCF-SEALEFFSQMRVAGFKPNNFTFAGVLKACLGLQNFDAGKTVHCSVLKTN 177

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  VG  L+ +Y R G  +DA +AF  + + +++ ++ M+  +A++  SEKA E+  
Sbjct: 178 YERDLYVGVGLLELYTRCGDNDDAWRAFGDMPKNDVIPWSFMISRFAQSGQSEKALEIFC 237

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++    V  + +TF+S+L  ++ I ++   + IH   +K+G  ++  + NAL++ Y++C 
Sbjct: 238 QMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHALKAGLSTDVFVSNALMACYAKCG 297

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            +E + ++F+ + DRN +SW ++I  + + G   RAL +F  ML   ++   +TY ++L 
Sbjct: 298 CIEQSMELFEALSDRNDVSWNTIIVSYVQLGDGERALSLFSNMLRYQVQATEVTYSSILR 357

Query: 599 ACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           AC+    +  G + H  +    +G  Q +     ++D+  + GS+ +A  F+  M    D
Sbjct: 358 ACATLAALELGLQVHCLTAKTIYG--QDVAVGNALIDMYAKCGSIKDA-RFMFDMLDLRD 414

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEM 683
            + W   +    +HG   LG  A +M
Sbjct: 415 KVSWNAIICGYSMHG---LGVEAIKM 437



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 163/326 (50%), Gaps = 18/326 (5%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P S  +      G+ +KA+     M +    P+  T+S +L++     +  L K +H   
Sbjct: 215 PWSFMISRFAQSGQSEKALEIFCQMRRAFVIPNQFTFSSVLQASADIESLDLSKTIHGHA 274

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            ++ L  +  + N+L++ Y+KCG + ++ ++F+++ ++ D VSW+++I SYV  G    A
Sbjct: 275 LKAGLSTDVFVSNALMACYAKCGCIEQSMELFEALSDRND-VSWNTIIVSYVQLGDGERA 333

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           + +F  ML       E  +S+++RAC+    + +G  ++    K  Y   DV VG ALID
Sbjct: 334 LSLFSNMLRYQVQATEVTYSSILRACATLAALELGLQVHCLTAKTIY-GQDVAVGNALID 392

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           M+ K GS+  + A  +FD +  ++ V W  +I   +  G   +AI++F  M  +   PD 
Sbjct: 393 MYAKCGSI--KDARFMFDMLDLRDKVSWNAIICGYSMHGLGVEAIKMFNLMKETKCKPDE 450

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV-----DGSVD 338
            T  GV+SACS       GKQ  + +++    ++ C+       +  C V      G++D
Sbjct: 451 LTFVGVLSACSNTGRLDEGKQYFT-SMKQDYGIEPCME------HYTCMVWLMGRSGNLD 503

Query: 339 DSRKVFDRM-LDHNVMSWTAIITGYV 363
            + K  + +  + +VM W A++   V
Sbjct: 504 QAVKFIEDIPFEPSVMIWRALLGACV 529


>gi|359489486|ref|XP_002269573.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Vitis vinifera]
          Length = 786

 Score =  547 bits (1409), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/745 (39%), Positives = 437/745 (58%), Gaps = 34/745 (4%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N++I  Y+  G LNEA K+F      R  ++WSS+IS Y   G  V+A+ +F EM   G 
Sbjct: 76  NTMIGAYANSGRLNEARKLFYET-PIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE 134

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN++ + +V+R CS    +  G  I+   +K   FDS+  V   L+DM+ K    LE+ 
Sbjct: 135 RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKT-QFDSNAFVVTGLVDMYAKCKCILEAE 193

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           Y       ++N V WT M+T  +Q G    AI  F DM   G   ++FT   +++AC  +
Sbjct: 194 YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G Q+H   +R+G   +V VG +LVDMY+KC   G + ++R++ + M   + +SW 
Sbjct: 254 SACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC---GDLSNARRMLETMEVDDPVSWN 310

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++I G V+ G   +EA+ LF  M    +  + FT+ SVL     ++D   A  V++  VK
Sbjct: 311 SMIVGCVRQG-LGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVK 369

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G      V N+L+ MYA+ G  + A   FE + +K+++S+ ++V     N + E+A  L
Sbjct: 370 TGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRL 429

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             E+   G+       A++LS  + +  +  G+Q+HA  +KSG  S+  + N+L+SMY++
Sbjct: 430 FCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAK 489

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  +E A +VF  ME ++VI+WT++I G+A++G                           
Sbjct: 490 CGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGR------------------------ 525

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
                HAGL+  G  +F+SM + +GI    EHYACM+DLLGRSG L EA E +  M +  
Sbjct: 526 ----DHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQP 581

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  VW+  L ACRVHG+ ELG+ AA  + E +P++   ++LLSNLY++AG WE  A  R+
Sbjct: 582 DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRR 641

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            MK R + KE GCSWIE  +KVH+F   + SHP+T EIY+++D++ + IKE GY+PD NF
Sbjct: 642 LMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNF 701

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
            LH+++EE K   L  HSEK+AVAFGL++     PIR+FKNLR+CGDCHTA+KY+S V  
Sbjct: 702 ALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFH 761

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R ++LRDSN FHH ++G CSC+DYW
Sbjct: 762 RHVILRDSNCFHHFREGACSCSDYW 786



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 277/562 (49%), Gaps = 29/562 (5%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P+  T+  +L+ C        GK +H+   +++ + N+ ++  L+ +Y+KC  
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EA  +F+   +KR+ V W++M++ Y   G    AI  F +M   G   N++ F +++ 
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC +      G  ++G +++ G F ++V VG AL+DM+ K   DL +A ++ + M   + 
Sbjct: 249 ACGSISACGFGAQVHGCIVRSG-FGANVFVGSALVDMYSKCG-DLSNARRMLETMEVDDP 306

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  MI  C + G   +A+ LF  M L     D FT   V++  S +    +   +HS 
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMRNAMSVHSL 366

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            ++TG      V  +LVDMYAK    G  D +  VF++M D +V+SWT+++TG V +G  
Sbjct: 367 IVKTGFEAYKLVNNALVDMYAK---RGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY 423

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           + EA++LF +M    + P+    A+VL AC  L      +QV+ + +K G      V NS
Sbjct: 424 E-EALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNS 482

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN----------LNSEKAFELLH 478
           L+SMYA+ G +EDA K F+S+  ++++++  ++  YA+N           +    F+ + 
Sbjct: 483 LVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDHAGLVEHGRSYFQSME 542

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           E+     G   Y     L G S     GK  +    + +   + +  ++ AL++      
Sbjct: 543 EVYGIKPGPEHYACMIDLLGRS-----GKLMEAKELLNQMAVQPDATVWKALLAACRVHG 597

Query: 539 NVE----AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI-KPNGITY 593
           NVE    AA  +F E+E +N + +  +   ++  G    A +    M   G+ K  G ++
Sbjct: 598 NVELGERAANNLF-ELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSW 656

Query: 594 IAVLSACSHAGLISEGWKHFRS 615
           I + S       +SE   H R+
Sbjct: 657 IEMSSKVHR--FMSEDRSHPRT 676



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 136/432 (31%), Positives = 225/432 (52%), Gaps = 25/432 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   KAI     M  +G   +  T+  +L +C        G  VH  + RS    N  
Sbjct: 217 QNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVF 276

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKCGDL+ A ++ ++M    D VSW+SMI   V +G   +A+ +F  M   
Sbjct: 277 VGSALVDMYSKCGDLSNARRMLETM-EVDDPVSWNSMIVGCVRQGLGEEALSLFRIMHLR 335

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               +E+ + +V+   S   ++     ++  ++K G F++   V  AL+DM+ K     +
Sbjct: 336 HMKIDEFTYPSVLNCFSFVMDMRNAMSVHSLIVKTG-FEAYKLVNNALVDMYAKRGY-FD 393

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A+ VF+KMT+K+ + WT ++T C   G   +A+RLF +M + G  PD+  ++ V+SAC+
Sbjct: 394 YAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACA 453

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           EL +   GKQ+H+  +++GL   + V  SLV MYAKC   G ++D+ KVFD M   +V++
Sbjct: 454 ELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKC---GCIEDANKVFDSMEIQDVIT 510

Query: 355 WTAIITGYVQSG-GRDKEAV-----KLFSDM--IQG-QVAPNHFT-FASVLKACGNLLDS 404
           WTA+I GY Q+G GRD   +       F  M  + G +  P H+     +L   G L+++
Sbjct: 511 WTALIVGYAQNGRGRDHAGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEA 570

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE---KNLVSYNTMV 461
              E +   AV+     D  V  +L++     G +E   +A  +LFE   KN V Y  + 
Sbjct: 571 K--ELLNQMAVQP----DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLS 624

Query: 462 DAYAKNLNSEKA 473
           + Y+     E+A
Sbjct: 625 NLYSAAGKWEEA 636



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 115/472 (24%), Positives = 205/472 (43%), Gaps = 94/472 (19%)

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           +TF+   K C  L  + +   +       G        N ++S  ++ GR++DARK F+ 
Sbjct: 9   YTFSR--KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDV 66

Query: 449 LFEKNLVSYNTMVDAYAKN--LNSEK-----------------------------AFELL 477
           + +++  S+NTM+ AYA +  LN  +                             A EL 
Sbjct: 67  MPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            E++  G   + +T+ S+L   S    + KG+QIHA  IK+ F+SN  +   L+ MY++C
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 538 ANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
             +  A  +F+   D RN + WT+M+TG++++G   +A+E F  M  +GI+ N  T+ ++
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA------CMVDLLGRSGSLTEALEFIR 650
           L+AC        G +        HG + R    A       +VD+  + G L+ A   + 
Sbjct: 247 LTACGSISACGFGAQ-------VHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLE 299

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELG------KHAAEMILEQ--------------DPQ 690
           +M +  D + W + +  C   G  E         H   M +++              D +
Sbjct: 300 TMEVD-DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSVLNCFSFVMDMR 358

Query: 691 DP------------AAHILLSN----LYASAGHWEYVANIRKRMKERNLIKE----AGC- 729
           +              A+ L++N    +YA  G+++Y  ++ ++M ++++I       GC 
Sbjct: 359 NAMSVHSLIVKTGFEAYKLVNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCV 418

Query: 730 ---SWIEADNKVHKFHVGETSHPKTLEIYAELDQLA-LKIKEFGYLPDTNFV 777
              S+ EA     +  +    HP  + I A L   A L + EFG     NF+
Sbjct: 419 HNGSYEEALRLFCEMRIMGI-HPDQIVIAAVLSACAELTVLEFGKQVHANFL 469



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/110 (31%), Positives = 62/110 (56%), Gaps = 1/110 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +++G  ++A+     M   G HPD    + +L +C        GK VH+   +S L  + 
Sbjct: 418 VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSL 477

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
            + NSL+S+Y+KCG + +ANK+F SM   +D+++W+++I  Y   G+  D
Sbjct: 478 SVDNSLVSMYAKCGCIEDANKVFDSM-EIQDVITWTALIVGYAQNGRGRD 526


>gi|357167803|ref|XP_003581340.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Brachypodium distachyon]
          Length = 940

 Score =  546 bits (1408), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/799 (36%), Positives = 466/799 (58%), Gaps = 13/799 (1%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           + L    G  PD  T + +LK+     +   G  VH L  +  L+ ++ + N+LI++Y+K
Sbjct: 152 MRLSAASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAK 211

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG L+ A ++F+ M + RD+ SW+SMIS  +  G  + A+ +F  M       N Y    
Sbjct: 212 CGILDSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVG 271

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC-ALIDMFVK-GSVDLESAYKVFDKM 243
           V++ C+    + +G  ++  LLK G   S+V + C AL+ M+ K G VD  SA +VF ++
Sbjct: 272 VLQVCTELAQLNLGRELHAALLKSG---SEVNIQCNALLVMYTKCGRVD--SALRVFREI 326

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            EK+ + W  M++   Q G   +AI    +M+  GF PD   +  + SA   L    +GK
Sbjct: 327 DEKDYISWNSMLSCYVQNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGK 386

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           ++H++AI+  L  D  VG +L+DMY KC     ++ S  VFDRM   + +SWT IIT Y 
Sbjct: 387 EVHAYAIKQRLDSDTQVGNTLMDMYMKCRY---IEYSAHVFDRMRIKDHISWTTIITCYA 443

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           QS  R  EA+++F +  +  +  +     S+L+AC  L    +A+Q++ +A++ G  LD 
Sbjct: 444 QSS-RHIEALEIFREAQKEGIKVDPMMIGSILEACSGLETILLAKQLHCYAIRNG-LLDL 501

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N +I +Y   G +  + K FE++ +K++V++ +M++ YA +    +A  L  E++ T
Sbjct: 502 VVKNRIIDIYGECGEVYHSLKMFETVEQKDIVTWTSMINCYANSGLLNEALVLFAEMQST 561

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
            V   +    S+L     + ++ KG+++H  +I+  F     I ++L+ MYS C ++  A
Sbjct: 562 DVQPDSVALVSILGAIGGLSSLAKGKEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGA 621

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +VF  ++ ++++ WT+MI     HG   +A+++F +ML  G+ P+ ++++A+L ACSH+
Sbjct: 622 LKVFNAVKCKDMVLWTAMINATGMHGHGKQAIDLFKRMLQTGVTPDHVSFLALLYACSHS 681

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
            L++EG  +   M   + +    EHYAC+VDLLGRSG   EA EFI+SMPL    +VW +
Sbjct: 682 KLVNEGKCYLDMMMSTYRLEPWQEHYACVVDLLGRSGQTEEAYEFIKSMPLKPKSVVWCS 741

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            LGACRVH + EL   AA  +LE +P +P  ++L+SN++A  G W     +R R+ ER L
Sbjct: 742 LLGACRVHKNHELAVVAANRLLELEPDNPGNYVLVSNVFAEMGKWNNAKEVRARISERGL 801

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGYLPDTNFVLHELE 782
            K+  CSWIE  N VH F   + SH     I  +L ++  ++ KE GY  DT  VLH++ 
Sbjct: 802 RKDPACSWIEIGNNVHTFTTRDNSHRDAERINLKLAEITERLRKEGGYTEDTRSVLHDVS 861

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE+KV  L +HSE++A++FGLI+T    P+R+ KNLRVCGDCH   K +S +  R+IV+R
Sbjct: 862 EEEKVDVLHRHSERLAISFGLINTRPGMPLRIAKNLRVCGDCHEFTKLVSKLFDRDIVVR 921

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+NRFHH   G CSC D+W
Sbjct: 922 DANRFHHFSGGSCSCGDFW 940



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 187/700 (26%), Positives = 348/700 (49%), Gaps = 47/700 (6%)

Query: 20  PSNPSRQ--NLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPD 77
           P NP ++    PPS SPP    PT+ + L         +G +++A+  L   T  G  P 
Sbjct: 9   PPNPYKKFSTTPPSISPP---DPTSLKQLCK-------EGNLRQALRLLTSQT-PGRSPP 57

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHS--LLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
            + Y  +L      +    G  VH+  + T S    +  +   L+ +Y KCG + +A  +
Sbjct: 58  QEHYGWVLDLVAAKKAVAQGVQVHAHAVATGSLEGDDGFLATKLLFMYGKCGRVADARLL 117

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM---LELGFCPNEYCFSAVIRACSN 192
           F  M + R + SW+++I +Y++ G   +A+ ++  M      G  P+    ++V++A   
Sbjct: 118 FDGM-SSRTVFSWNALIGAYLSSGSACEALGVYRAMRLSAASGVAPDGCTLASVLKASGV 176

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-KNTVGW 251
             +   G  ++G  +K G  D    V  ALI M+ K  + L+SA +VF+ M + ++   W
Sbjct: 177 EGDGRCGCEVHGLAVKHG-LDRSTFVANALIAMYAKCGI-LDSAMRVFELMHDGRDVASW 234

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
             MI+ C Q G    A+ LF  M  +    + +T  GV+  C+EL     G++LH+  ++
Sbjct: 235 NSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQVCTELAQLNLGRELHAALLK 294

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           +G  +++     LV MY KC   G VD + +VF  + + + +SW ++++ YVQ+ G   E
Sbjct: 295 SGSEVNIQCNALLV-MYTKC---GRVDSALRVFREIDEKDYISWNSMLSCYVQN-GLYAE 349

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A++  S+M++G   P+H    S+  A G+L      ++V+ +A+K+    D  VGN+L+ 
Sbjct: 350 AIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHAYAIKQRLDSDTQVGNTLMD 409

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY +   +E +   F+ +  K+ +S+ T++  YA++    +A E+  E +  G+      
Sbjct: 410 MYMKCRYIEYSAHVFDRMRIKDHISWTTIITCYAQSSRHIEALEIFREAQKEGIKVDPMM 469

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
             S+L   S +  I   +Q+H   I++G   +  + N +I +Y  C  V  + ++F+ +E
Sbjct: 470 IGSILEACSGLETILLAKQLHCYAIRNGL-LDLVVKNRIIDIYGECGEVYHSLKMFETVE 528

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            +++++WTSMI  +A  G    AL +F +M +  ++P+ +  +++L A      +++G  
Sbjct: 529 QKDIVTWTSMINCYANSGLLNEALVLFAEMQSTDVQPDSVALVSILGAIGGLSSLAKG-- 586

Query: 612 HFRSMYDEHGIVQR----MEH--YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
                 + HG + R    ME    + +VD+    GSL+ AL+   ++    D+++W   +
Sbjct: 587 -----KEVHGFLIRRNFHMEEAIVSSLVDMYSGCGSLSGALKVFNAVKCK-DMVLWTAMI 640

Query: 666 GACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYA 703
            A  +HG    GK A ++   + Q    P     L+ LYA
Sbjct: 641 NATGMHGH---GKQAIDLFKRMLQTGVTPDHVSFLALLYA 677



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 127/525 (24%), Positives = 230/525 (43%), Gaps = 80/525 (15%)

Query: 367 GRDKEAVKLFSDMIQGQVAPN-HFTFASVLKACGNLLDSNVAEQVYTHAVKRG--RALDD 423
           G  ++A++L +    G+  P  H+ +   L A    +   V  QV+ HAV  G     D 
Sbjct: 38  GNLRQALRLLTSQTPGRSPPQEHYGWVLDLVAAKKAVAQGV--QVHAHAVATGSLEGDDG 95

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE-- 481
            +   L+ MY + GR+ DAR  F+ +  + + S+N ++ AY  + ++ +A  +   +   
Sbjct: 96  FLATKLLFMYGKCGRVADARLLFDGMSSRTVFSWNALIGAYLSSGSACEALGVYRAMRLS 155

Query: 482 -DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
             +GV     T AS+L  +   G    G ++H   +K G + +  + NALI+MY++C  +
Sbjct: 156 AASGVAPDGCTLASVLKASGVEGDGRCGCEVHGLAVKHGLDRSTFVANALIAMYAKCGIL 215

Query: 541 EAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           ++A +VF+ M D R+V SW SMI+G  ++G   +AL++F  M    +  N  T + VL  
Sbjct: 216 DSAMRVFELMHDGRDVASWNSMISGCLQNGMFLQALDLFRGMQRAVLSMNSYTTVGVLQV 275

Query: 600 CS-----------HAGLISEG-----------------------WKHFRSMYDEHGIVQR 625
           C+           HA L+  G                        + FR + DE   +  
Sbjct: 276 CTELAQLNLGRELHAALLKSGSEVNIQCNALLVMYTKCGRVDSALRVFREI-DEKDYISW 334

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSM------PLSADVLVWRTFLGACR-VHGDTELGK 678
               +C V    ++G   EA+EFI  M      P  A ++   + +G    +    E+  
Sbjct: 335 NSMLSCYV----QNGLYAEAIEFISEMLRGGFQPDHACIVSLSSAVGHLGWLLNGKEVHA 390

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
           +A +  L+ D Q       L ++Y    + EY A++  RM+ ++ I     SW      +
Sbjct: 391 YAIKQRLDSDTQVGNT---LMDMYMKCRYIEYSAHVFDRMRIKDHI-----SW----TTI 438

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ--YLFQHSEK 796
              +   + H + LEI+ E  +  +K+       D   +   LE    ++   L +    
Sbjct: 439 ITCYAQSSRHIEALEIFREAQKEGIKV-------DPMMIGSILEACSGLETILLAKQLHC 491

Query: 797 IAVAFGLIS-TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
            A+  GL+    K++ I ++     CG+ + ++K    V  ++IV
Sbjct: 492 YAIRNGLLDLVVKNRIIDIYGE---CGEVYHSLKMFETVEQKDIV 533


>gi|38606535|emb|CAE06013.3| OSJNBa0016O02.23 [Oryza sativa Japonica Group]
 gi|116310014|emb|CAH67039.1| OSIGBa0124N08.1 [Oryza sativa Indica Group]
 gi|116310420|emb|CAH67428.1| OSIGBa0150F01.8 [Oryza sativa Indica Group]
          Length = 939

 Score =  546 bits (1407), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 288/792 (36%), Positives = 471/792 (59%), Gaps = 13/792 (1%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD  T + +LK+C    +   G  VH L  +S L+ ++++ N+L+ +Y+KCG L+ A
Sbjct: 158 GAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCGLLDSA 217

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F+ M + RD+ SW+S IS  V  G  ++A+ +F  M   GF  N Y    V++ C+ 
Sbjct: 218 LRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAE 277

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGC-ALIDMFVK-GSVDLESAYKVFDKMTEKNTVG 250
              +  G  ++  LLKCG   ++  + C AL+ M+ + G VD  SA +VF ++ +K+ + 
Sbjct: 278 LAQLNHGRELHAALLKCG---TEFNIQCNALLVMYARCGWVD--SALRVFREIGDKDYIS 332

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  M++   Q     +AI  F +M+ +GF PD   +  ++SA   L    +G+++H++A+
Sbjct: 333 WNSMLSCYVQNRLYAEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAV 392

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           +  L  D+ +  +L+DMY KC    SV+ S +VFDRM   + +SWT II  Y QS  R  
Sbjct: 393 KQRLDSDLQIANTLMDMYIKCY---SVECSARVFDRMRIKDHVSWTTIIACYAQSS-RYS 448

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+  F    +  +  +     S+L+AC  L   ++ +QV+++A++ G  LD  + N +I
Sbjct: 449 EAIGKFRTAQKEGIKVDPMMMGSILEACSGLKSISLLKQVHSYAIRNG-LLDLILKNRII 507

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            +Y   G +  A   FE L +K++V++ +MV+ +A+N    +A  L  ++ + G+   + 
Sbjct: 508 DIYGECGEVCYALNIFEMLDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSV 567

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
               +L   + + ++ KG++IH  +I+  F     + ++L+ MYS C ++  A +VF E 
Sbjct: 568 ALVGILGAIAGLSSLTKGKEIHGFLIRGKFPVEGAVVSSLVDMYSGCGSMNYALKVFDEA 627

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           + ++V+ WT+MI     HG   +A+ IF +ML  G+ P+ ++++A+L ACSH+ L+ EG 
Sbjct: 628 KCKDVVLWTAMINATGMHGHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGK 687

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
            +   M  ++ +    EHYAC+VDLLGRSG   EA +FI+SMPL    +VW   LGACR+
Sbjct: 688 FYLDMMVSKYKLQPWQEHYACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGACRI 747

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           H + EL   A + +LE +P +P  ++L+SN++A  G W  V  IR +M E+ L K+  CS
Sbjct: 748 HKNHELAMIATDKLLELEPDNPGNYVLVSNVFAEMGKWNNVKEIRTKMTEQGLRKDPACS 807

Query: 731 WIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG-YLPDTNFVLHELEEEQKVQY 789
           WIE  N VH F   + SH  +  I+ +L ++  K++  G Y+ DT+FVLH++ EE+K+  
Sbjct: 808 WIEIGNTVHTFTARDHSHRDSQAIHLKLAEITEKLRREGQYVEDTSFVLHDVSEEEKIDL 867

Query: 790 LFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHH 849
           L +HSE++A++FGLIST+   P+R+ KNLRVCGDCH   K +S +  REIV+RD+NRFHH
Sbjct: 868 LHRHSERLAISFGLISTASGTPLRIAKNLRVCGDCHEFTKLVSKLFEREIVVRDANRFHH 927

Query: 850 IKDGKCSCNDYW 861
              G CSC D+W
Sbjct: 928 FSGGTCSCGDFW 939



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 176/681 (25%), Positives = 333/681 (48%), Gaps = 42/681 (6%)

Query: 20  PSNPS-RQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPD- 77
           P +P+ R+ LPP+S+   + Q                DG +++A+  L   + +G  P  
Sbjct: 8   PFHPTPRRKLPPASAGASLRQLC-------------KDGDLREALRQLAARSARGRAPPP 54

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL---EPNSVILNSLISLYSKCGDLNEANK 134
            D Y  +L      R    G+ +H+    +     +    +   L+ +Y KCG L +A++
Sbjct: 55  TDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDAGFLATKLLFMYGKCGRLPDAHR 114

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE----LGFCPNEYCFSAVIRAC 190
           +F  M   R + SW+++I + ++ G   +A+ ++  M       G  P+    ++V++AC
Sbjct: 115 LFDGM-PARTVFSWNALIGACLSSGGAGEAVGVYRAMRASEPVAGAAPDGCTLASVLKAC 173

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-KNTV 249
               +   G  ++G  +K G  D    V  AL+ M+ K  + L+SA +VF+ M + ++  
Sbjct: 174 GAEGDGRCGSEVHGLAVKSG-LDRSTLVANALVGMYAKCGL-LDSALRVFEWMRDGRDVA 231

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W   I+ C Q G   +A+ LF  M   GF  + +T  GV+  C+EL     G++LH+  
Sbjct: 232 SWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVLQVCAELAQLNHGRELHAAL 291

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           ++ G   ++     LV MYA+C   G VD + +VF  + D + +SW ++++ YVQ+    
Sbjct: 292 LKCGTEFNIQCNALLV-MYARC---GWVDSALRVFREIGDKDYISWNSMLSCYVQN-RLY 346

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
            EA+  F +M+Q    P+H    S+L A G+L       +V+ +AVK+    D  + N+L
Sbjct: 347 AEAIDFFGEMVQNGFNPDHACIVSLLSAVGHLGRLINGREVHAYAVKQRLDSDLQIANTL 406

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           + MY +   +E + + F+ +  K+ VS+ T++  YA++    +A       +  G+    
Sbjct: 407 MDMYIKCYSVECSARVFDRMRIKDHVSWTTIIACYAQSSRYSEAIGKFRTAQKEGIKVDP 466

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
               S+L   S + +I   +Q+H+  I++G   +  + N +I +Y  C  V  A  +F+ 
Sbjct: 467 MMMGSILEACSGLKSISLLKQVHSYAIRNGL-LDLILKNRIIDIYGECGEVCYALNIFEM 525

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           ++ +++++WTSM+  FA++G    A+ +F KML  GI+P+ +  + +L A +    +++G
Sbjct: 526 LDKKDIVTWTSMVNCFAENGLLHEAVALFGKMLNAGIQPDSVALVGILGAIAGLSSLTKG 585

Query: 610 WK----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
            +      R  +   G V      + +VD+    GS+  AL+         DV++W   +
Sbjct: 586 KEIHGFLIRGKFPVEGAV-----VSSLVDMYSGCGSMNYALKVFDEAKCK-DVVLWTAMI 639

Query: 666 GACRVHGDTELGKHAAEMILE 686
            A  +HG  +   +  + +LE
Sbjct: 640 NATGMHGHGKQAIYIFKRMLE 660



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 94/361 (26%), Positives = 170/361 (47%), Gaps = 18/361 (4%)

Query: 367 GRDKEAVK-LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G  +EA++ L +   +G+  P    +  VL         +   Q++ HAV  G   DD  
Sbjct: 33  GDLREALRQLAARSARGRAPPPTDHYGWVLDLVAVRRAVSEGRQLHAHAVATGALGDDDA 92

Query: 426 G---NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
           G     L+ MY + GR+ DA + F+ +  + + S+N ++ A   +  + +A  +   +  
Sbjct: 93  GFLATKLLFMYGKCGRLPDAHRLFDGMPARTVFSWNALIGACLSSGGAGEAVGVYRAMRA 152

Query: 483 T----GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +    G      T AS+L    + G    G ++H   +KSG + +  + NAL+ MY++C 
Sbjct: 153 SEPVAGAAPDGCTLASVLKACGAEGDGRCGSEVHGLAVKSGLDRSTLVANALVGMYAKCG 212

Query: 539 NVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            +++A +VF+ M D R+V SW S I+G  ++G    AL++F +M +DG   N  T + VL
Sbjct: 213 LLDSALRVFEWMRDGRDVASWNSAISGCVQNGMFLEALDLFRRMQSDGFSMNSYTTVGVL 272

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
             C+    ++ G +   +   + G    ++  A +V +  R G +  AL   R +    D
Sbjct: 273 QVCAELAQLNHG-RELHAALLKCGTEFNIQCNALLV-MYARCGWVDSALRVFREIG-DKD 329

Query: 658 VLVWRTFLGACRVHGD--TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            + W + L +C V      E      EM+  Q+  +P  H  + +L ++ GH   + N R
Sbjct: 330 YISWNSML-SCYVQNRLYAEAIDFFGEMV--QNGFNP-DHACIVSLLSAVGHLGRLINGR 385

Query: 716 K 716
           +
Sbjct: 386 E 386



 Score = 41.6 bits (96), Expect = 1.8,   Method: Compositional matrix adjust.
 Identities = 26/99 (26%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKL-VHSLLTRSKLEPNSVI 115
           G  ++AI+    M + G  PD  ++  LL +C  S+    GK  +  ++++ KL+P    
Sbjct: 646 GHGKQAIYIFKRMLETGVSPDHVSFLALLYACSHSKLVDEGKFYLDMMVSKYKLQPWQEH 705

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
              ++ L  + G   EA K  KSM  +   V W +++ +
Sbjct: 706 YACVVDLLGRSGQTEEAYKFIKSMPLEPKSVVWCALLGA 744


>gi|414587348|tpg|DAA37919.1| TPA: hypothetical protein ZEAMMB73_411767 [Zea mays]
          Length = 920

 Score =  545 bits (1405), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 284/786 (36%), Positives = 459/786 (58%), Gaps = 7/786 (0%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P     S +L +C + + F  G+++H+ + +      + + N+LI+LY   G    A ++
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M    D V+++++IS +   G    A+ +F EM   G  P+    ++++ AC++  +
Sbjct: 202 FCDMLFC-DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++ +LLK G    D     +L+D++VK   D+E+A+ +F+     N V W LM+
Sbjct: 261 LQKGKQLHSYLLKAG-MSFDYITEGSLLDLYVKCG-DIETAHDIFNLGDRTNVVLWNLML 318

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               Q+     +  +F  M  +G  P++FT   ++  C+       G+Q+HS +I+ G  
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D+ V   L+DMY+K      +D +RK+ + +   +V+SWT++I GYVQ    + EA+  
Sbjct: 379 SDMYVSGVLIDMYSKYRC---LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE-EALAT 434

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F +M    V P++   AS   AC  +       Q++      G A D  + N+L+++YAR
Sbjct: 435 FKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYAR 494

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR E+A   F  +  K+ +++N ++  + ++   E+A  +  ++   G   + +TF S 
Sbjct: 495 CGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFMKMSQAGAKYNVFTFISA 554

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           +S  +++  I +G+Q+H R +K+G  S   + NALIS+Y +C ++E A  +F EM  RN 
Sbjct: 555 ISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE 614

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW ++IT  ++HG    AL++F +M  +G+KPN +T+I VL+ACSH GL+ EG  +F+S
Sbjct: 615 VSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKS 674

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M + +G+    +HYAC+VD+LGR+G L  A  F+  MP++A+ ++WRT L AC+VH + E
Sbjct: 675 MSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIE 734

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           +G+ AA+ +LE +P D A+++LLSN YA  G W     +RK MK+R + KE G SWIE  
Sbjct: 735 IGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVK 794

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           N VH F VG+  HP + +IY  L +L  ++ + GY  +   + HE E+EQK    F HSE
Sbjct: 795 NAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSE 854

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           K+AVAFGL++     P+RV KNLRVC DCH+ +K+ S VT REIVLRD  RFHH   G C
Sbjct: 855 KLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKFTSEVTRREIVLRDVYRFHHFNSGSC 914

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 915 SCGDYW 920



 Score =  286 bits (733), Expect = 3e-74,   Method: Compositional matrix adjust.
 Identities = 177/574 (30%), Positives = 307/574 (53%), Gaps = 11/574 (1%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+      L  + +I N LI LY+K G + +A ++FK + + RD VSW +M+S Y  RG
Sbjct: 65  IHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL-SSRDHVSWVAMLSGYAQRG 123

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A  ++ +M      P  Y  S+V+ AC+  +  A G +I+  + K   F S+  VG
Sbjct: 124 LGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQA-FCSETFVG 182

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            ALI +++ G    + A +VF  M   + V +  +I+   Q G    A+++F +M LSG 
Sbjct: 183 NALIALYL-GFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQLSGL 241

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            PD  T++ +++AC+ +     GKQLHS+ ++ G++ D     SL+D+Y KC   G ++ 
Sbjct: 242 RPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKC---GDIET 298

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +  +F+     NV+ W  ++  Y Q     K + ++F  M    + PN FT+  +L+ C 
Sbjct: 299 AHDIFNLGDRTNVVLWNLMLVAYGQISDLAK-SFEIFGQMQATGIHPNKFTYPCILRTCT 357

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
                 + EQ+++ ++K G   D  V   LI MY++   ++ ARK  E L ++++VS+ +
Sbjct: 358 CTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARKILEMLEKRDVVSWTS 417

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+  Y ++   E+A     E++D GV       AS  S  + I A+ +G QIHAR+  SG
Sbjct: 418 MIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSG 477

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           + ++  I+N L+++Y+RC   E AF +F+E++ ++ I+W  +I+GF +     +AL +F 
Sbjct: 478 YAADISIWNTLVNLYARCGRSEEAFSLFREIDHKDEITWNGLISGFGQSRLYEQALMVFM 537

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGR 638
           KM   G K N  T+I+ +SA ++   I +G + H R++   H      E    ++ L G+
Sbjct: 538 KMSQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGH--TSETEVANALISLYGK 595

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            GS+ +A      M L  +V  W T + +C  HG
Sbjct: 596 CGSIEDAKMIFSEMSLRNEV-SWNTIITSCSQHG 628



 Score =  229 bits (585), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/519 (28%), Positives = 266/519 (51%), Gaps = 11/519 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  + A+   D M   G  PD  T + LL +C    +   GK +HS L ++ +  +
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            +   SL+ LY KCGD+  A+ IF ++G++ ++V W+ M+ +Y        +  +F +M 
Sbjct: 280 YITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN++ +  ++R C+ T  + +G  I+   +K G F+SD+ V   LIDM+ K    
Sbjct: 339 ATGIHPNKFTYPCILRTCTCTGQIELGEQIHSLSIKNG-FESDMYVSGVLIDMYSKYRC- 396

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A K+ + + +++ V WT MI    Q     +A+  F +M   G  PD   L+   SA
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASA 456

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-N 351
           C+ ++    G Q+H+    +G A D+ +  +LV++YA+C   G  +++  +F R +DH +
Sbjct: 457 CAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC---GRSEEAFSLF-REIDHKD 512

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++W  +I+G+ QS   + +A+ +F  M Q     N FTF S + A  NL D    +QV+
Sbjct: 513 EITWNGLISGFGQSRLYE-QALMVFMKMSQAGAKYNVFTFISAISALANLADIKQGKQVH 571

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             AVK G   +  V N+LIS+Y + G +EDA+  F  +  +N VS+NT++ + +++    
Sbjct: 572 GRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGL 631

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNAL 530
           +A +L  +++  G+  +  TF  +L+  S +G + +G      +    G       Y  +
Sbjct: 632 EALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACV 691

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           + +  R   ++ A +   EM    N + W ++++    H
Sbjct: 692 VDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 194/370 (52%), Gaps = 10/370 (2%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           ++H+ ++  GL  D  +G  L+D+YAK   +G V  +R+VF  +   + +SW A+++GY 
Sbjct: 64  EIHATSVVRGLGADRLIGNLLIDLYAK---NGLVWQARQVFKELSSRDHVSWVAMLSGYA 120

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRAL 421
           Q  G  KEA +L+S M    V P  +  +SVL AC  G L        ++    K+    
Sbjct: 121 QR-GLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQ--GRMIHAQVYKQAFCS 177

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  VGN+LI++Y   G  + A + F  +   + V++NT++  +A+  + E A ++  E++
Sbjct: 178 ETFVGNALIALYLGFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGHGECALQIFDEMQ 237

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
            +G+     T ASLL+  +S+G + KG+Q+H+ ++K+G   ++    +L+ +Y +C ++E
Sbjct: 238 LSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIE 297

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A  +F   +  NV+ W  M+  + +    A++ EIF +M A GI PN  TY  +L  C+
Sbjct: 298 TAHDIFNLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNKFTYPCILRTCT 357

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
             G I  G +   S+  ++G    M     ++D+  +   L +A + I  M    DV+ W
Sbjct: 358 CTGQIELG-EQIHSLSIKNGFESDMYVSGVLIDMYSKYRCLDKARK-ILEMLEKRDVVSW 415

Query: 662 RTFLGACRVH 671
            + +     H
Sbjct: 416 TSMIAGYVQH 425


>gi|225455746|ref|XP_002268440.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Vitis vinifera]
          Length = 881

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 286/807 (35%), Positives = 466/807 (57%), Gaps = 18/807 (2%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           +IF+ +L++   + PD  T   ++K+C    +  LG+++H + T+  L  +  + N+LI+
Sbjct: 86  SIFS-ELISVTEHKPDNFTLPCVIKACAGLLDLGLGQIIHGMATKMDLVSDVFVGNALIA 144

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPN 179
           +Y KCG + EA K+F+ M  +R++VSW+S+I  +   G   ++ + F EML  E  F P+
Sbjct: 145 MYGKCGLVEEAVKVFEHM-PERNLVSWNSIICGFSENGFLQESFNAFREMLVGEESFVPD 203

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
                 V+  C+  E++  G  ++G  +K G  + ++ V  +LIDM+ K    L  A  +
Sbjct: 204 VATLVTVLPVCAGEEDIEKGMAVHGLAVKLG-LNEELMVNNSLIDMYSKCRF-LSEAQLL 261

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-----LDMILSGFLPDRFTLSGVVSACS 294
           FDK  +KN V W  MI    +     D  R F     +    +    D FT+  V+  C 
Sbjct: 262 FDKNDKKNIVSWNSMIGGYAR---EEDVCRTFYLLQKMQTEDAKMKADEFTILNVLPVCL 318

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           E     S K+LH ++ R GL  +  V  + +  Y +C   G++  S +VFD M    V S
Sbjct: 319 ERSELQSLKELHGYSWRHGLQSNELVANAFIAAYTRC---GALCSSERVFDLMDTKTVSS 375

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A++ GY Q+    ++A+ L+  M    + P+ FT  S+L AC  +   +  E+++  A
Sbjct: 376 WNALLCGYAQNSD-PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFA 434

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           ++ G A+D  +G SL+S+Y   G+   A+  F+ +  ++LVS+N M+  Y++N   ++A 
Sbjct: 435 LRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAI 494

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L  ++   G+         +    S + A+  G+++H   +K+    +  + +++I MY
Sbjct: 495 NLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMY 554

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++   +  + ++F  + +++V SW  +I G+  HG    ALE+F KML  G+KP+  T+ 
Sbjct: 555 AKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFT 614

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            +L ACSHAGL+ +G ++F  M + H I  ++EHY C+VD+LGR+G + +AL  I  MP 
Sbjct: 615 GILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPG 674

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D  +W + L +CR+HG+  LG+  A  +LE +P+ P  ++L+SNL+A +G W+ V  +
Sbjct: 675 DPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRV 734

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R RMK+  L K+AGCSWIE   KVH F +G+   P+  E+     +L +KI   GY PDT
Sbjct: 735 RGRMKDIGLQKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDT 794

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
             VLH+LEEE K+  L  HSEK+A++FGL++T+K  P+RV+KNLR+CGDCH A K+IS V
Sbjct: 795 GSVLHDLEEEDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKV 854

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             R+IV+RD+ RFHH +DG CSC DYW
Sbjct: 855 VNRDIVVRDNKRFHHFRDGICSCGDYW 881



 Score =  263 bits (671), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 165/610 (27%), Positives = 322/610 (52%), Gaps = 24/610 (3%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSKCGDLNEANKIFKSMGN 141
           +LL++C + ++  +G+ +H +++ S    N  +LN+ +I++YS CG  +++  +F  +  
Sbjct: 3   VLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRMVFDKL-R 61

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGH 200
           ++++  W++++S+Y       DA+ +F E++ +    P+ +    VI+AC+   ++ +G 
Sbjct: 62  RKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQ 121

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           II+G   K     SDV VG ALI M+ K  + +E A KVF+ M E+N V W  +I   ++
Sbjct: 122 IIHGMATKMDLV-SDVFVGNALIAMYGKCGL-VEEAVKVFEHMPERNLVSWNSIICGFSE 179

Query: 261 LGCPRDAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            G  +++   F +M++    F+PD  TL  V+  C+  E    G  +H  A++ GL  ++
Sbjct: 180 NGFLQESFNAFREMLVGEESFVPDVATLVTVLPVCAGEEDIEKGMAVHGLAVKLGLNEEL 239

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            V  SL+DMY+KC     + +++ +FD+    N++SW ++I GY     R+++  + F  
Sbjct: 240 MVNNSLIDMYSKCRF---LSEAQLLFDKNDKKNIVSWNSMIGGY----AREEDVCRTFYL 292

Query: 379 MIQGQ-----VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
           + + Q     +  + FT  +VL  C    +    ++++ ++ + G   ++ V N+ I+ Y
Sbjct: 293 LQKMQTEDAKMKADEFTILNVLPVCLERSELQSLKELHGYSWRHGLQSNELVANAFIAAY 352

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            R G +  + + F+ +  K + S+N ++  YA+N +  KA +L  ++ D+G+    +T  
Sbjct: 353 TRCGALCSSERVFDLMDTKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIG 412

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           SLL   S + ++  GE+IH   +++G   +  I  +L+S+Y  C    AA  +F  ME R
Sbjct: 413 SLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISLLSLYICCGKPFAAQVLFDGMEHR 472

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +++SW  MI G++++G    A+ +F +ML+DGI+P  I  + V  ACS    +  G K  
Sbjct: 473 SLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLG-KEL 531

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
                +  + + +   + ++D+  + G +  +      +    DV  W   +    +HG 
Sbjct: 532 HCFALKAHLTEDIFVSSSIIDMYAKGGCIGLSQRIFDRLR-EKDVASWNVIIAGYGIHGR 590

Query: 674 TELGKHAAEM 683
              GK A E+
Sbjct: 591 ---GKEALEL 597



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 97/309 (31%), Positives = 153/309 (49%), Gaps = 20/309 (6%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           +KA+     MT  G  PD  T   LL +C R ++ H G+ +H    R+ L  +  I  SL
Sbjct: 390 RKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDPFIGISL 449

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           +SLY  CG    A  +F  M   R +VSW+ MI+ Y   G   +AI++F +ML  G  P 
Sbjct: 450 LSLYICCGKPFAAQVLFDGM-EHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSDGIQPY 508

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           E     V  ACS    + +G  ++ F LK  +   D+ V  ++IDM+ KG   +  + ++
Sbjct: 509 EIAIMCVCGACSQLSALRLGKELHCFALK-AHLTEDIFVSSSIIDMYAKGGC-IGLSQRI 566

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE---- 295
           FD++ EK+   W ++I      G  ++A+ LF  M+  G  PD FT +G++ ACS     
Sbjct: 567 FDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHAGLV 626

Query: 296 ---LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHN 351
              LE F     LH+  I   L    CV    VDM  +    G +DD+ ++ + M  D +
Sbjct: 627 EDGLEYFNQMLNLHN--IEPKLEHYTCV----VDMLGRA---GRIDDALRLIEEMPGDPD 677

Query: 352 VMSWTAIIT 360
              W+++++
Sbjct: 678 SRIWSSLLS 686



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/205 (21%), Positives = 101/205 (49%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +AI     M   G  P       +  +C +     LGK +H    ++ L  +  
Sbjct: 486 QNGLPDEAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIF 545

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + +S+I +Y+K G +  + +IF  +  ++D+ SW+ +I+ Y   G+  +A+ +F +ML L
Sbjct: 546 VSSSIIDMYAKGGCIGLSQRIFDRL-REKDVASWNVIIAGYGIHGRGKEALELFEKMLRL 604

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+++ F+ ++ ACS+   V  G   +  +L     +  +     ++DM  +    ++
Sbjct: 605 GLKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAG-RID 663

Query: 235 SAYKVFDKMT-EKNTVGWTLMITRC 258
            A ++ ++M  + ++  W+ +++ C
Sbjct: 664 DALRLIEEMPGDPDSRIWSSLLSSC 688


>gi|242090705|ref|XP_002441185.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
 gi|241946470|gb|EES19615.1| hypothetical protein SORBIDRAFT_09g021880 [Sorghum bicolor]
          Length = 878

 Score =  545 bits (1404), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 301/820 (36%), Positives = 481/820 (58%), Gaps = 15/820 (1%)

Query: 46  LSNRLIYHLNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           L + L  H   G V +A+   LD+    G          +LK C    +  LGK +H L 
Sbjct: 70  LDHALFDHARRGSVHQALDHFLDVHRCHGGRVGGGALVGVLKVCGSVPDRVLGKQLHGLC 129

Query: 105 TRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
            R   +   V +  SL+ +Y K   + +  K+F++M  KR++V+W+S+++ Y+  G   D
Sbjct: 130 IRCGHDRGDVGVGTSLVDMYMKWHSVVDGRKVFEAM-PKRNVVTWTSLLTGYIQDGALSD 188

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
            + +F  M   G  PN   F++V+   ++   V +G  ++   +K G   S V V  +L+
Sbjct: 189 VMELFFRMRAEGVWPNSVTFASVLSVVASQGMVDLGRRVHAQSVKFGCC-STVFVCNSLM 247

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           +M+ K  + +E A  VF  M  ++ V W  ++      G   +A++LF D   S  +  +
Sbjct: 248 NMYAKCGL-VEEARVVFCGMETRDMVSWNTLMAGLVLNGHDLEALQLFHDSRSSITMLTQ 306

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            T + V+  C+ ++     +QLHS  ++ G      V  +L+D Y+K    G + ++  +
Sbjct: 307 STYATVIKLCANIKQLGLARQLHSSVLKRGFHSYGNVMTALMDAYSKA---GQLGNALDI 363

Query: 344 FDRML-DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           F  M    NV+SWTA+I G +Q+G     A  LFS M +  VAPN FT++++L A     
Sbjct: 364 FLLMSGSQNVVSWTAMINGCIQNGDV-PLAAALFSRMREDGVAPNDFTYSTILTAS---- 418

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
            +++  Q++   +K        VG +L++ Y++    E+A   F+ + +K++VS++ M+ 
Sbjct: 419 VASLPPQIHAQVIKTNYECTSIVGTALLASYSKLCNTEEALSIFKMIDQKDVVSWSAMLT 478

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG-ASSIGAIGKGEQIHARIIKSGFE 521
            YA+  +S+ A  +  ++   G+  + +T +S++   AS    +  G Q HA  IK    
Sbjct: 479 CYAQAGDSDGATNIFIKMTMHGLKPNEFTISSVIDACASPTAGVDLGRQFHAISIKHRCH 538

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
              C+ +AL+SMY+R  ++E+A  +F+   DR+++SW SM++G+A+HG++ +AL++F +M
Sbjct: 539 DALCVSSALVSMYARKGSIESAQCIFERQTDRDLVSWNSMLSGYAQHGYSQKALDVFRQM 598

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
            A+GI+ +G+T+++V+  C+HAGL+ EG ++F SM  ++GI   MEHYACMVDL  R+G 
Sbjct: 599 EAEGIEMDGVTFLSVIMGCAHAGLVEEGQRYFDSMARDYGITPTMEHYACMVDLYSRAGK 658

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
           L EA+  I  M   A  +VWRT LGAC+VH + ELGK AAE +L  +P D A ++LLSN+
Sbjct: 659 LDEAMSLIEGMSFPAGPMVWRTLLGACKVHKNVELGKLAAEKLLSLEPFDSATYVLLSNI 718

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           Y++AG W+    +RK M  + + KEAGCSWI+  NKVH F   + SHP + +IYA+L  +
Sbjct: 719 YSAAGKWKEKDEVRKLMDTKKVKKEAGCSWIQIKNKVHSFIASDKSHPLSEQIYAKLRAM 778

Query: 762 ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVC 821
             K+K+ GY PDT+F LHE+ EEQK   L  HSE++A+AFGLI+T    P+ +FKNLRVC
Sbjct: 779 TTKLKQEGYCPDTSFALHEVAEEQKEAMLAMHSERLALAFGLIATPPGAPLHIFKNLRVC 838

Query: 822 GDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GDCHT IK +S +  REIV+RD +RFHH   G CSC D+W
Sbjct: 839 GDCHTVIKMVSKIEDREIVMRDCSRFHHFNSGVCSCGDFW 878


>gi|302797174|ref|XP_002980348.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
 gi|300151964|gb|EFJ18608.1| hypothetical protein SELMODRAFT_112174 [Selaginella moellendorffii]
          Length = 801

 Score =  545 bits (1403), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 298/805 (37%), Positives = 483/805 (60%), Gaps = 27/805 (3%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+      L+ +C    N   G+ +HS ++    E NSV+ N+LIS+YSKCG L +A + 
Sbjct: 5   PNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDAKQA 64

Query: 136 FKSM--GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP-NEYCFSAVIRACSN 192
           F  +   +KRD+V+W++MIS+++  G   +A+ +F +M   G  P N   F +V+ +C  
Sbjct: 65  FDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDSCVE 124

Query: 193 TENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVF----DKMTE 245
              +++  +  I+G ++  G  + +  V  AL+D + K GS+D   A++VF    D+   
Sbjct: 125 AGLLSLEDVRAIHGRIVGAG-IEREAFVRTALVDSYGKLGSLD--DAWEVFLRKSDEEPS 181

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            + V  + MI+ C Q G P++++RLF  M L G  P   TL  V++ACS L + ++   +
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACSMLPVGSATAFV 241

Query: 306 HSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
              A+    A  D  +G +L+  YA+      +  +R  FD +   +V+SW A+   Y+Q
Sbjct: 242 LEQAMEVVSATRDNVLGTTLLTTYAR---SNDLSRARATFDAIQSPDVVSWNAMAAAYLQ 298

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL---LDSNVAEQVYTHAVKRGRAL 421
              R +EA+ LF  M+   V P+  TF + L AC        S + +++ +   + G   
Sbjct: 299 HH-RPREALVLFERMLLEGVRPSVATFITALTACAAYPPQTASAIGKRIQSLLEEAGLEG 357

Query: 422 DDCVGNSLISMYARSGRMEDARKAFE--SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           D  V N+ ++MYA+ G + DAR  FE  S   ++ +++N+M+ AY  +   ++AFEL   
Sbjct: 358 DTAVANATLNMYAKCGSLADARAVFERISPTRRDCITWNSMLAAYGHHGLGKEAFELFQA 417

Query: 480 IE-DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +E +  V  +  TF ++L  ++S  +I +G +IHAR++ +GFES+  I NAL++MY++C 
Sbjct: 418 MEAEKLVKPNKVTFVAVLDASTSRTSIAQGREIHARVVSNGFESDTVIQNALLNMYAKCG 477

Query: 539 NVEAAFQVFKEME--DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           +++ A  +F +      +VI+WTS++ G+A++G A RAL++F+ M   G++PN IT+I+ 
Sbjct: 478 SLDDAQAIFDKSSSNQEDVIAWTSLVAGYAQYGQAERALKLFWTMQQQGVRPNHITFISA 537

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L+AC+H G + +G +    M  +HGIV   +H++C+VDLLGR G L EA + +      A
Sbjct: 538 LTACNHGGKLEQGCELLSGMTPDHGIVPASKHFSCIVDLLGRCGRLDEAEKLLERTS-QA 596

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           DV+ W   L AC+   + E G+  AE I++ DP+  +++I+L+++YA+AG W   A IRK
Sbjct: 597 DVITWMALLDACKNSKELERGERCAERIMQLDPEVASSYIVLASMYAAAGRWNEAATIRK 656

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M ++ +  + GCS +E + ++H F  G+ SHPK+ EIY EL++L   IK  GY+ DT  
Sbjct: 657 TMLDKGIRADPGCSAVEVNQELHSFSAGDKSHPKSEEIYLELERLHWSIKAAGYVADTGL 716

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH++ +E K + L +HSEK+A+AFGL+ST    P+RV KNLRVC DCHTA K IS VTG
Sbjct: 717 VLHDVSQEHKERLLMRHSEKLAIAFGLMSTPSGSPLRVIKNLRVCSDCHTATKLISKVTG 776

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R+I++RDS+R+HH   G CSC DYW
Sbjct: 777 RDILMRDSSRYHHFTSGTCSCGDYW 801



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 192/395 (48%), Gaps = 35/395 (8%)

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           +V PN     +++ AC  L +     ++++    R    +  +GN+LISMY++ G + DA
Sbjct: 2   EVRPNCHALIALVNACSCLGNLAAGRRIHSQISDRDFEENSVLGNALISMYSKCGSLIDA 61

Query: 443 RKAFESL---FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV-GTSAYTFASLLSG 498
           ++AF+ L    ++++V++N M+ A+ +N ++ +A +L  +++  G    ++ TF S+L  
Sbjct: 62  KQAFDRLPRASKRDVVTWNAMISAFLRNGSAREALQLFRDMDHDGAPPPNSVTFVSVLDS 121

Query: 499 ASSIG--AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR--- 553
               G  ++     IH RI+ +G E    +  AL+  Y +  +++ A++VF    D    
Sbjct: 122 CVEAGLLSLEDVRAIHGRIVGAGIEREAFVRTALVDSYGKLGSLDDAWEVFLRKSDEEPS 181

Query: 554 -NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            ++++ ++MI+   ++G+   +L +FY M  +G KP+G+T ++VL+ACS   ++  G   
Sbjct: 182 TSLVTCSAMISACWQNGWPQESLRLFYAMNLEGTKPSGVTLVSVLNACS---MLPVGSAT 238

Query: 613 FRSMYDEHGIVQRMEHYACMVDLL---GRSGSLTEALEFIRSMPLSADVLVWRTFLGA-C 668
              +     +V           LL    RS  L+ A     ++  S DV+ W     A  
Sbjct: 239 AFVLEQAMEVVSATRDNVLGTTLLTTYARSNDLSRARATFDAIQ-SPDVVSWNAMAAAYL 297

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN-IRKRMKERNLIKEA 727
           + H   E       M+LE     P+    ++ L A A +    A+ I KR++  +L++EA
Sbjct: 298 QHHRPREALVLFERMLLEG--VRPSVATFITALTACAAYPPQTASAIGKRIQ--SLLEEA 353

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           G   +E D  V            TL +YA+   LA
Sbjct: 354 G---LEGDTAVAN---------ATLNMYAKCGSLA 376


>gi|357449183|ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355483916|gb|AES65119.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 874

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 318/895 (35%), Positives = 501/895 (55%), Gaps = 61/895 (6%)

Query: 5   SLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQP-----TTSEP-LSNRLIYHL---- 54
           S   P  +P PSS     P++ + PP+SS              +EP L +  + HL    
Sbjct: 3   SFTQPLLLPYPSSIH--TPNKHHSPPTSSSAITTTTTTTTTVAAEPRLPSEWVSHLRSQT 60

Query: 55  -NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
            +     +AI T   M   G  PD   +  +LK+    ++ +LGK +H+ + +      +
Sbjct: 61  QSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLNLGKQLHAHVFKFGQALPT 120

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + NSL+++Y KCGD++ A ++F  + N RD VSW+SMI++     +   A+H+F  ML 
Sbjct: 121 AVPNSLVNMYGKCGDIDAARRVFDEITN-RDDVSWNSMINAACRFEEWELAVHLFRLMLL 179

Query: 174 LGFCPNEYCFSAVIRACSNTEN-VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
               P  +   +V  ACSN  N + +G  ++ F+L+ G  D       AL+ M+ K    
Sbjct: 180 ENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNG--DWRTFTNNALVTMYAKLGRV 237

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E A  +FD   +K+ V W  +I+  +Q     +A+     M+ SG  P+  TL+ V+ A
Sbjct: 238 YE-AKTLFDVFDDKDLVSWNTIISSLSQNDRFEEALLYLHVMLQSGVRPNGVTLASVLPA 296

Query: 293 CSELELFTSGKQLHSWAI-RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           CS LE+   GK++H++ +    L  +  VGC+LVDMY  C      +  R VFD M    
Sbjct: 297 CSHLEMLGCGKEIHAFVLMNNDLIENSFVGCALVDMYCNCK---QPEKGRLVFDGMFRRT 353

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +  W A+I GYV++   D EA++LF +M+ +  ++PN  T +SVL AC         E +
Sbjct: 354 IAVWNAMIAGYVRNE-FDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGI 412

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           ++  VK G   D  V N+L+ MY+R GR+E AR  F S+  K++VS+NTM+  Y      
Sbjct: 413 HSCVVKWGFEKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRH 472

Query: 471 EKAFELLHEIE------------------DTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           + A  LLH+++                  +  +  ++ T  ++L G +++ A+GKG++IH
Sbjct: 473 DDALNLLHDMQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIH 532

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           A  +K     +  + +AL+ MY++C  +  +  VF++M  RNVI+W  +I  +  HG   
Sbjct: 533 AYAVKQMLSKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGE 592

Query: 573 RALEIFYKMLADG-----IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
            AL++F +M+ +G     I+PN +TYIA+ ++ SH+G++ EG   F +M  +HGI    +
Sbjct: 593 EALKLFRRMVEEGDNNREIRPNEVTYIAIFASLSHSGMVDEGLNLFYTMKAKHGIEPTSD 652

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLS-ADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           HYAC+VDLLGRSG + EA   I++MP +   V  W + LGAC++H + E+G+ AA+ +  
Sbjct: 653 HYACLVDLLGRSGQIEEAYNLIKTMPSNMKKVDAWSSLLGACKIHQNLEIGEIAAKNLFV 712

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            DP     ++L      S         + ++MKE+ + KE GCSWIE  ++VHKF  G+ 
Sbjct: 713 LDP-----NVLDYGTKQSM--------LGRKMKEKGVRKEPGCSWIEHGDEVHKFLAGDV 759

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           SHP++ E++  L+ L+L++K+ GY+PDT+ VLH + EE+K   L  HSE++A+AFGL++T
Sbjct: 760 SHPQSKEVHEYLETLSLRMKKEGYVPDTSCVLHNVGEEEKETMLCGHSERLAIAFGLLNT 819

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S    IRV KNLRVC DCH A K+IS +  REI+LRD  RFHH ++G CSC DYW
Sbjct: 820 SPGTTIRVAKNLRVCNDCHVATKFISKIVDREIILRDVRRFHHFRNGTCSCGDYW 874


>gi|115453719|ref|NP_001050460.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|108709057|gb|ABF96852.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113548931|dbj|BAF12374.1| Os03g0441400 [Oryza sativa Japonica Group]
 gi|215767379|dbj|BAG99607.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 837

 Score =  544 bits (1402), Expect = e-152,   Method: Compositional matrix adjust.
 Identities = 292/792 (36%), Positives = 470/792 (59%), Gaps = 15/792 (1%)

Query: 76  PDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTR----SKLEPNSVILNSLISLYSKCGDL 129
           P +D+++    L+ CI   +   G+ VH  + R     +L+      N L+++Y K G L
Sbjct: 55  PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLD--LFCANVLLNMYGKLGPL 112

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
             A ++F  M  +R++VS+ +++ ++  RG    A  +F  +   G   N++  + +++ 
Sbjct: 113 ASARRLFDRM-PERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL 171

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
               +   +   ++    K G+ D +  VG  LID +   S+ +  A  VF+ +  K+ V
Sbjct: 172 AIAMDAAGLAGGVHSCAWKLGH-DHNAFVGSGLIDAYSLCSL-VSDAEHVFNGIVRKDAV 229

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            WT M++  ++  CP +A R+F  M +SG  P+ F L+ V+ A   L     GK +H  A
Sbjct: 230 VWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCA 289

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I+T    +  VG +L+DMYAKC   G + D+R  F+ +   +V+  + +I+ Y QS  ++
Sbjct: 290 IKTLNDTEPHVGGALLDMYAKC---GDIKDARLAFEMIPYDDVILLSFMISRYAQSN-QN 345

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           ++A +LF  +++  V PN ++ +SVL+AC N++  +  +Q++ HA+K G   D  VGN+L
Sbjct: 346 EQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL 405

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           +  YA+   M+ + K F SL + N VS+NT+V  ++++   E+A  +  E++   +  + 
Sbjct: 406 MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 465

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            T++S+L   +S  +I    QIH  I KS F ++  I N+LI  Y++C  +  A +VF+ 
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 525

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           + +R++ISW ++I+G+A HG AA ALE+F +M    ++ N IT++A+LS CS  GL++ G
Sbjct: 526 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
              F SM  +HGI   MEHY C+V LLGR+G L +AL+FI  +P +   +VWR  L +C 
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
           +H +  LG+ +AE ILE +PQD   ++LLSN+YA+AG  + VA +RK M+   + K  G 
Sbjct: 646 IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGL 705

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQY 789
           SW+E   ++H F VG   HP    I A L+ L LK    GY+PD N VLH++++EQK + 
Sbjct: 706 SWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRM 765

Query: 790 LFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHH 849
           L+ HSE++A+A+GL+ T    PIR+ KNLR C DCHTA   IS +  REI++RD NRFHH
Sbjct: 766 LWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHH 825

Query: 850 IKDGKCSCNDYW 861
            +DGKCSC DYW
Sbjct: 826 FEDGKCSCGDYW 837



 Score =  223 bits (568), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 271/548 (49%), Gaps = 11/548 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  + A      +  +G+  +    + +LK  I      L   VHS   +   + N
Sbjct: 137 HAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHN 196

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + + + LI  YS C  +++A  +F  +  ++D V W++M+S Y       +A  +F +M 
Sbjct: 197 AFVGSGLIDAYSLCSLVSDAEHVFNGI-VRKDAVVWTAMVSCYSENDCPENAFRVFSKMR 255

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN +  ++V++A     +V +G  I+G  +K    D++  VG AL+DM+ K   D
Sbjct: 256 VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT-LNDTEPHVGGALLDMYAKCG-D 313

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A   F+ +   + +  + MI+R  Q      A  LFL ++ S  LP+ ++LS V+ A
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 373

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ +     GKQ+H+ AI+ G   D+ VG +L+D YAKC     +D S K+F  + D N 
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN---DMDSSLKIFSSLRDANE 430

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW  I+ G+ QS G  +EA+ +F +M   Q+     T++SVL+AC +      A Q++ 
Sbjct: 431 VSWNTIVVGFSQS-GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 489

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
              K     D  +GNSLI  YA+ G + DA K F+ L E++++S+N ++  YA +  +  
Sbjct: 490 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 549

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALI 531
           A EL   +  + V ++  TF +LLS  SS G +  G  +   + I  G + +   Y  ++
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIV 609

Query: 532 SMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
            +  R   +  A Q   ++    + + W ++++    H   A       K+L   I+P  
Sbjct: 610 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE--IEPQD 667

Query: 591 ITYIAVLS 598
            T   +LS
Sbjct: 668 ETTYVLLS 675


>gi|168048332|ref|XP_001776621.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672066|gb|EDQ58609.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 703

 Score =  544 bits (1401), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 278/699 (39%), Positives = 425/699 (60%), Gaps = 6/699 (0%)

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           +AI + +  L+ G   + + +  V++ C   +++     ++  ++K    + +  V   L
Sbjct: 11  EAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIK-SRMEQNAHVMNNL 69

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           + ++++    L+ A  VFD + +K+   W  MI    +     DA+RLF +M   G  P+
Sbjct: 70  LHVYIECG-RLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQPN 128

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
             T   ++ AC+ L     GK++H+     GL  DV VG +L+ MY KC   GS++++R+
Sbjct: 129 AGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKC---GSINEARR 185

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           +FD +++H+++SWT +I  Y QSG   KEA +L   M Q    PN  T+ S+L AC +  
Sbjct: 186 IFDNLMNHDIISWTVMIGAYAQSGN-GKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
                ++V+ HA+  G  LD  VG +L+ MYA+SG ++DAR  F+ +  +++VS+N M+ 
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVRDVVSWNVMIG 304

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
           A+A++    +A++L  +++  G    A  F S+L+  +S GA+   ++IH   + SG E 
Sbjct: 305 AFAEHGRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDSGLEV 364

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           +  +  AL+ MYS+  +++ A  VF  M+ RNV+SW +MI+G A+HG    ALE+F +M 
Sbjct: 365 DVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVFRRMT 424

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           A G+KP+ +T++AVLSACSHAGL+ EG   + +M   +GI   + H  CMVDLLGR+G L
Sbjct: 425 AHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHCNCMVDLLGRAGRL 484

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA  FI +M +  D   W   LG+CR +G+ ELG+  A+  L+ DP++ A ++LLSN+Y
Sbjct: 485 MEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELGELVAKERLKLDPKNAATYVLLSNIY 544

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           A AG W+ V+ +R  M+ER + KE G SWIE DNK+H F V ++SHP+  EI    D++ 
Sbjct: 545 AEAGKWDMVSWVRTMMRERGIRKEPGRSWIEVDNKIHDFLVADSSHPECKEINESKDKVI 604

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
            KIK  GY+PDT  VL     + K   +  HSEK+A+ +GL+ T    PIRVFKNLRVC 
Sbjct: 605 EKIKAEGYIPDTRLVLKNKNMKDKELDICSHSEKLAIVYGLMHTPPGNPIRVFKNLRVCT 664

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           DCH A K IS V GREI++RD+NRFHH KDG CSC DYW
Sbjct: 665 DCHGATKLISKVEGREIIVRDANRFHHFKDGVCSCGDYW 703



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 177/572 (30%), Positives = 295/572 (51%), Gaps = 23/572 (4%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           + +AI  L    Q+G   D   Y  +LK C++ ++    K VH  + +S++E N+ ++N+
Sbjct: 9   LSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQNAHVMNN 68

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+ +Y +CG L EA  +F ++  K+   SW++MI+ YV      DA+ +F EM   G  P
Sbjct: 69  LLHVYIECGRLQEARCVFDAL-VKKSGASWNAMIAGYVEHKHAEDAMRLFREMCHEGVQP 127

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           N   +  +++AC++   +  G  ++   ++ G  +SDV VG AL+ M+ K GS++   A 
Sbjct: 128 NAGTYMIILKACASLSALKWGKEVHA-CIRHGGLESDVRVGTALLRMYGKCGSIN--EAR 184

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           ++FD +   + + WT+MI    Q G  ++A RL L M   GF P+  T   +++AC+   
Sbjct: 185 RIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACASEG 244

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
                K++H  A+  GL LDV VG +LV MYAK    GS+DD+R VFDRM   +V+SW  
Sbjct: 245 ALKWVKRVHRHALDAGLELDVRVGTALVQMYAK---SGSIDDARVVFDRMKVRDVVSWNV 301

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +I  + +  GR  EA  LF  M      P+   F S+L AC +       ++++ HA+  
Sbjct: 302 MIGAFAEH-GRGHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHRHALDS 360

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G  +D  VG +L+ MY++SG ++DAR  F+ +  +N+VS+N M+   A++   + A E+ 
Sbjct: 361 GLEVDVRVGTALVHMYSKSGSIDDARVVFDRMKVRNVVSWNAMISGLAQHGLGQDALEVF 420

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGE-QIHARIIKSGFESN--HCIYNALISMY 534
             +   GV     TF ++LS  S  G + +G  Q  A     G E +  HC  N ++ + 
Sbjct: 421 RRMTAHGVKPDRVTFVAVLSACSHAGLVDEGRSQYLAMTQVYGIEPDVSHC--NCMVDLL 478

Query: 535 SRCANV-EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
            R   + EA   +     D +  +W +++     +G      E+  K        N  TY
Sbjct: 479 GRAGRLMEAKLFIDNMAVDPDEATWGALLGSCRTYGNVELG-ELVAKERLKLDPKNAATY 537

Query: 594 IAVLSACSHAG---LISEGWKHFRSMYDEHGI 622
           + + +  + AG   ++S  W   R+M  E GI
Sbjct: 538 VLLSNIYAEAGKWDMVS--W--VRTMMRERGI 565



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 187/359 (52%), Gaps = 9/359 (2%)

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           +VQ+     EA+ +  + +Q  +  + F +  VLK C    D   A+QV+   +K     
Sbjct: 2   HVQTANTLSEAIVVLMNRLQRGLITDSFMYVEVLKRCLKQKDLMAAKQVHDCIIKSRMEQ 61

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  V N+L+ +Y   GR+++AR  F++L +K+  S+N M+  Y ++ ++E A  L  E+ 
Sbjct: 62  NAHVMNNLLHVYIECGRLQEARCVFDALVKKSGASWNAMIAGYVEHKHAEDAMRLFREMC 121

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV  +A T+  +L   +S+ A+  G+++HA I   G ES+  +  AL+ MY +C ++ 
Sbjct: 122 HEGVQPNAGTYMIILKACASLSALKWGKEVHACIRHGGLESDVRVGTALLRMYGKCGSIN 181

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A ++F  + + ++ISWT MI  +A+ G    A  +  +M  +G KPN ITY+++L+AC+
Sbjct: 182 EARRIFDNLMNHDIISWTVMIGAYAQSGNGKEAYRLMLQMEQEGFKPNAITYVSILNACA 241

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
             G +    +  R   D  G+   +     +V +  +SGS+ +A      M +  DV+ W
Sbjct: 242 SEGALKWVKRVHRHALDA-GLELDVRVGTALVQMYAKSGSIDDARVVFDRMKVR-DVVSW 299

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQ--DPAAHILLS--NLYASAGHWEYVANIRK 716
              +GA   HG    G  A ++ L+   +   P A + LS  N  ASAG  E+V  I +
Sbjct: 300 NVMIGAFAEHGR---GHEAYDLFLQMQTEGCKPDAIMFLSILNACASAGALEWVKKIHR 355


>gi|224057914|ref|XP_002299387.1| predicted protein [Populus trichocarpa]
 gi|222846645|gb|EEE84192.1| predicted protein [Populus trichocarpa]
          Length = 814

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 306/822 (37%), Positives = 485/822 (59%), Gaps = 37/822 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--VILNSLISLYSKC 126
           M   G  PD   +  +LK+    +  +LGK +H+ + +      S   I N+L+++Y KC
Sbjct: 1   MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFKFGYGSFSSVTIDNTLVNMYGKC 60

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L +A K+F  +  +RD VSW+S+IS+     +   AI  F  ML  GF P+ +   ++
Sbjct: 61  GGLGDAYKVFDRI-TERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGFEPSSFTLVSM 119

Query: 187 IRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
             ACSN    + + +G  I+G   + G++ +      AL+ M+ K    L+ A  +    
Sbjct: 120 ALACSNLRKRDGLWLGKQIHGCCFRKGHWRT--FSNNALMAMYAKLG-RLDDAKSLLVLF 176

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            +++ V W  MI+  +Q     +A+     M+L G  PD  T + V+ ACS L+L  +GK
Sbjct: 177 EDRDLVTWNSMISSFSQNERFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGK 236

Query: 304 QLHSWAIRTGLALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           ++H++A+RT   ++   VG +LVDMY  C   G V+  R VFD +LD  +  W A+I GY
Sbjct: 237 EIHAYALRTDDVIENSFVGSALVDMYCNC---GQVESGRLVFDSVLDRKIGLWNAMIAGY 293

Query: 363 VQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            QS   D++A+ LF +M     +  N  T +S++ A       +  E ++ + +KRG   
Sbjct: 294 AQSE-HDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRGLET 352

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE-- 479
           +  + N+LI MY+R G ++ +++ F+S+ ++++VS+NT++ +Y     S  A  LLHE  
Sbjct: 353 NRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQ 412

Query: 480 -IEDTGVGTSAY-------------TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
            IE+       Y             T  ++L G +S+ A+ KG++IHA  I++   S   
Sbjct: 413 RIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVT 472

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + +AL+ MY++C  +  A +VF +M  RNVI+W  +I  +  HG    +LE+F  M+A+G
Sbjct: 473 VGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELFEDMVAEG 532

Query: 586 -----IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
                +KP  +T+IA+ ++CSH+G++ EG   F  M +EHGI    +HYAC+VDL+GR+G
Sbjct: 533 AKGGEVKPTEVTFIALFASCSHSGMVDEGLSLFHKMKNEHGIEPAPDHYACIVDLVGRAG 592

Query: 641 SLTEALEFIRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
            + EA   + +MP   D V  W + LGACR++ + E+G+ AAE +L+  P   + ++LLS
Sbjct: 593 KVEEAYGLVNTMPSGFDKVGAWSSLLGACRIYHNIEIGEIAAENLLQLQPDVASHYVLLS 652

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y+SAG W+   N+R+RMK   + KE GCSWIE  ++VHKF  G+ SHP++ +++  L+
Sbjct: 653 NIYSSAGLWDKAMNLRRRMKAMGVKKEPGCSWIEYGDEVHKFLAGDLSHPQSEKLHDFLE 712

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
            L+ ++K+ GY+PDT  VLH+++EE+K   L  HSEK+A+AFG+++T     IRV KNLR
Sbjct: 713 TLSERLKKEGYVPDTACVLHDIDEEEKETILCGHSEKLAIAFGILNTPPGTTIRVAKNLR 772

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VC DCHTA K+IS +  REI+LRD+ RFHH KDG CSC DYW
Sbjct: 773 VCNDCHTASKFISKIEDREIILRDARRFHHFKDGTCSCGDYW 814



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 119/412 (28%), Positives = 212/412 (51%), Gaps = 37/412 (8%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVIL 116
           R  +A+  L LM  +G  PD  T++ +L +C        GK +H+   R+  +  NS + 
Sbjct: 196 RFMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVG 255

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LELG 175
           ++L+ +Y  CG +     +F S+ + R I  W++MI+ Y        A+ +F+EM    G
Sbjct: 256 SALVDMYCNCGQVESGRLVFDSVLD-RKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAG 314

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
              N    S+++ A    E ++    I+G+++K G  +++  +  ALIDM+ +   D+++
Sbjct: 315 LYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKRG-LETNRYLQNALIDMYSRMG-DIKT 372

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-------ILSG---------F 279
           + ++FD M +++ V W  +IT     G   DA+ L  +M          G         F
Sbjct: 373 SKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIEEKSTYDGDYNDEKQVPF 432

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            P+  TL  V+  C+ L     GK++H++AIR  LA  V VG +LVDMYAKC   G ++ 
Sbjct: 433 KPNSITLMTVLPGCASLSALAKGKEIHAYAIRNLLASQVTVGSALVDMYAKC---GCLNL 489

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-----GQVAPNHFTFASV 394
           +R+VFD+M   NV++W  II  Y    G+ KE+++LF DM+      G+V P   TF ++
Sbjct: 490 ARRVFDQMPIRNVITWNVIIMAYGMH-GKGKESLELFEDMVAEGAKGGEVKPTEVTFIAL 548

Query: 395 LKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
             +C +  ++D  ++     H +K    ++    +   ++ +  R+G++E+A
Sbjct: 549 FASCSHSGMVDEGLS---LFHKMKNEHGIEPAPDHYACIVDLVGRAGKVEEA 597


>gi|356502788|ref|XP_003520198.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g63370-like [Glycine max]
          Length = 923

 Score =  543 bits (1400), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 303/828 (36%), Positives = 470/828 (56%), Gaps = 17/828 (2%)

Query: 44  EPLSNRLIYHLN--------DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           + +S R I+  N         G+  +AI     M   G   D  T+  +LK+C       
Sbjct: 103 DEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESR 162

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS-MGNKRDIVSWSSMISS 154
           LG  +H +  +        + N+LI++Y KCGDL  A  +F   M  K D VSW+S+IS+
Sbjct: 163 LGAEIHGVAVKCGYGEFVFVCNALIAMYGKCGDLGGARVLFDGIMMEKEDTVSWNSIISA 222

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           +V  G  ++A+ +F  M E+G   N Y F A ++   +   V +G  I+G +LK  +F +
Sbjct: 223 HVAEGNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHF-A 281

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV V  ALI M+ K    +E A +VF+ M  ++ V W  +++   Q     DA+  F DM
Sbjct: 282 DVYVANALIAMYAKCG-RMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNYFRDM 340

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             SG  PD+ ++  +++A         GK++H++AIR GL  ++ +G +LVDMYAKC   
Sbjct: 341 QNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCC- 399

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
             V      F+ M + +++SWT II GY Q+     EA+ LF  +    +  +     SV
Sbjct: 400 --VKYMGHAFECMHEKDLISWTTIIAGYAQNEFH-LEAINLFRKVQVKGMDVDPMMIGSV 456

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L+AC  L   N   +++ +  KR  A D  + N+++++Y   G ++ AR+AFES+  K++
Sbjct: 457 LRACSGLKSRNFIREIHGYVFKRDLA-DIMLQNAIVNVYGEVGHIDYARRAFESIRSKDI 515

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           VS+ +M+     N    +A EL + ++ T +   +    S LS  +++ ++ KG++IH  
Sbjct: 516 VSWTSMITCCVHNGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKGKEIHGF 575

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           +I+ GF     I ++L+ MY+ C  VE + ++F  ++ R++I WTSMI     HG   +A
Sbjct: 576 LIRKGFFLEGPIASSLVDMYACCGTVENSRKMFHSVKQRDLILWTSMINANGMHGCGNKA 635

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           + +F KM    + P+ IT++A+L ACSH+GL+ EG + F  M   + +    EHYACMVD
Sbjct: 636 IALFKKMTDQNVIPDHITFLALLYACSHSGLMVEGKRFFEIMKYGYQLEPWPEHYACMVD 695

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LL RS SL EA  F+R+MP+     +W   LGAC +H + ELG+ AA+ +L+ D ++   
Sbjct: 696 LLSRSNSLEEAYHFVRNMPIKPSSEIWCALLGACHIHSNKELGELAAKELLQSDTENSGK 755

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           + L+SN++A+ G W  V  +R RMK   L K  GCSWIE DNK+H F   + SHP+T +I
Sbjct: 756 YALISNIFAADGRWNDVEEVRLRMKGNGLKKNPGCSWIEVDNKIHTFMARDKSHPQTDDI 815

Query: 755 YAELDQLA-LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIR 813
           Y +L Q   L  K+ GY+  T FV H + EE+K Q L+ HSE++A+ +GL+ T K   IR
Sbjct: 816 YLKLAQFTKLLEKKGGYIAQTKFVFHNVSEEEKTQMLYGHSERLALGYGLLVTPKGTCIR 875

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + KNLR+C DCHT  K  S V+ R +V+RD+NRFHH + G CSC D+W
Sbjct: 876 ITKNLRICDDCHTFFKIASEVSQRPLVVRDANRFHHFERGLCSCGDFW 923



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 185/678 (27%), Positives = 343/678 (50%), Gaps = 33/678 (4%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDT-------YSLLLKSCI 89
           I  P   +P+S   +  LN G ++ A  +L L++    HP L T       +SLLL  C+
Sbjct: 5   ILTPLPLKPIS---VNTLNKGTLKPAFQSLTLLS---THP-LATPSRLEHAHSLLLDLCV 57

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
            ++    G+ +H+LL +S L  ++ +   L+ +Y KCG L +A K+F  M ++R I SW+
Sbjct: 58  AAKALPQGQQLHALLLKSHL--SAFLATKLVLMYGKCGSLRDAVKVFDEM-SERTIFSWN 114

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           +++ ++V+ GK ++AI ++ +M  LG   +   F +V++AC       +G  I+G  +KC
Sbjct: 115 ALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGESRLGAEIHGVAVKC 174

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDA 267
           GY +  V V  ALI M+ K   DL  A  +FD   M +++TV W  +I+     G   +A
Sbjct: 175 GYGEF-VFVCNALIAMYGKCG-DLGGARVLFDGIMMEKEDTVSWNSIISAHVAEGNCLEA 232

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           + LF  M   G   + +T    +    +      G  +H   +++    DV V  +L+ M
Sbjct: 233 LSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLKSNHFADVYVANALIAM 292

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           YAKC   G ++D+ +VF+ ML  + +SW  +++G VQ+     +A+  F DM      P+
Sbjct: 293 YAKC---GRMEDAGRVFESMLCRDYVSWNTLLSGLVQN-ELYSDALNYFRDMQNSGQKPD 348

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
             +  +++ A G   +    ++V+ +A++ G   +  +GN+L+ MYA+   ++    AFE
Sbjct: 349 QVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAKCCCVKYMGHAFE 408

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            + EK+L+S+ T++  YA+N    +A  L  +++  G+        S+L   S + +   
Sbjct: 409 CMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSVLRACSGLKSRNF 468

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
             +IH  + K    ++  + NA++++Y    +++ A + F+ +  ++++SWTSMIT    
Sbjct: 469 IREIHGYVFKRDL-ADIMLQNAIVNVYGEVGHIDYARRAFESIRSKDIVSWTSMITCCVH 527

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           +G    ALE+FY +    I+P+ I  I+ LSA ++   + +G K         G      
Sbjct: 528 NGLPVEALELFYSLKQTNIQPDSIAIISALSATANLSSLKKG-KEIHGFLIRKGFFLEGP 586

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
             + +VD+    G++  + +   S+    D+++W + + A  +HG    G  A  +  + 
Sbjct: 587 IASSLVDMYACCGTVENSRKMFHSVK-QRDLILWTSMINANGMHG---CGNKAIALFKKM 642

Query: 688 DPQD--PAAHILLSNLYA 703
             Q+  P     L+ LYA
Sbjct: 643 TDQNVIPDHITFLALLYA 660



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 153/536 (28%), Positives = 266/536 (49%), Gaps = 30/536 (5%)

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
           E+  S ++  C   + +  G  ++  LLK         +   L+ M+ K GS  L  A K
Sbjct: 46  EHAHSLLLDLCVAAKALPQGQQLHALLLKSHL---SAFLATKLVLMYGKCGS--LRDAVK 100

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VFD+M+E+    W  ++      G   +AI L+ DM + G   D  T   V+ AC  L  
Sbjct: 101 VFDEMSERTIFSWNALMGAFVSSGKYLEAIELYKDMRVLGVAIDACTFPSVLKACGALGE 160

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML--DHNVMSWT 356
              G ++H  A++ G    V V  +L+ MY KC   G +  +R +FD ++    + +SW 
Sbjct: 161 SRLGAEIHGVAVKCGYGEFVFVCNALIAMYGKC---GDLGGARVLFDGIMMEKEDTVSWN 217

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           +II+ +V   G   EA+ LF  M +  VA N +TF + L+   +     +   ++   +K
Sbjct: 218 SIISAHVAE-GNCLEALSLFRRMQEVGVASNTYTFVAALQGVEDPSFVKLGMGIHGAVLK 276

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                D  V N+LI+MYA+ GRMEDA + FES+  ++ VS+NT++    +N     A   
Sbjct: 277 SNHFADVYVANALIAMYAKCGRMEDAGRVFESMLCRDYVSWNTLLSGLVQNELYSDALNY 336

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             +++++G      +  +L++ +   G + KG+++HA  I++G +SN  I N L+ MY++
Sbjct: 337 FRDMQNSGQKPDQVSVLNLIAASGRSGNLLKGKEVHAYAIRNGLDSNMQIGNTLVDMYAK 396

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  V+     F+ M ++++ISWT++I G+A++ F   A+ +F K+   G+  + +   +V
Sbjct: 397 CCCVKYMGHAFECMHEKDLISWTTIIAGYAQNEFHLEAINLFRKVQVKGMDVDPMMIGSV 456

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM-----VDLLGRSGSLTEALEFIRS 651
           L ACS       G K    + + HG V + +    M     V++ G  G +  A     S
Sbjct: 457 LRACS-------GLKSRNFIREIHGYVFKRDLADIMLQNAIVNVYGEVGHIDYARRAFES 509

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYASA 705
           +  S D++ W + +  C  +G   L   A E+   L+Q    P +  ++S L A+A
Sbjct: 510 IR-SKDIVSWTSMITCCVHNG---LPVEALELFYSLKQTNIQPDSIAIISALSATA 561


>gi|414587344|tpg|DAA37915.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
 gi|414587345|tpg|DAA37916.1| TPA: hypothetical protein ZEAMMB73_465451 [Zea mays]
          Length = 920

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 284/786 (36%), Positives = 459/786 (58%), Gaps = 7/786 (0%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P     S +L +C + + F  G+++H+ + +      + + N+LI+LY   G    A ++
Sbjct: 142 PTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGFGSFKLAERV 201

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M    D V+++++IS +   G    A+ +F EM   G  P+    ++++ AC++  +
Sbjct: 202 FCDMLFC-DRVTFNTLISGHAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGD 260

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++ +LLK G    D     +L+D++VK   D+E+A+ +F+     N V W LM+
Sbjct: 261 LQKGKQLHSYLLKAG-MSFDYITEGSLLDLYVKCG-DIETAHDIFNLGDRTNVVLWNLML 318

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               Q+     +  +F  M  +G  P++FT   ++  C+       G+Q+HS +I+ G  
Sbjct: 319 VAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFE 378

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D+ V   L+DMY+K    G +D +RK+ + +   +V+SWT++I GYVQ    + EA+  
Sbjct: 379 SDMYVSGVLIDMYSKY---GCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCE-EALAT 434

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F +M    V P++   AS   AC  +       Q++      G A D  + N+L+++YAR
Sbjct: 435 FKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYAR 494

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR E+A   F  +  K+ +++N ++  + ++   ++A  +  ++   G   + +TF S 
Sbjct: 495 CGRSEEAFSLFREIEHKDEITWNGLISGFGQSRLYKQALMVFMKMGQAGAKYNVFTFISA 554

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           +S  +++  I +G+Q+H R +K+G  S   + NALIS+Y +C ++E A  +F EM  RN 
Sbjct: 555 ISALANLADIKQGKQVHGRAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNE 614

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW ++IT  ++HG    AL++F +M  +G+KPN +T+I VL+ACSH GL+ EG  +F+S
Sbjct: 615 VSWNTIITSCSQHGRGLEALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKS 674

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M + +G+    +HYAC+VD+LGR+G L  A  F+  MP++A+ ++WRT L AC+VH + E
Sbjct: 675 MSNVYGLNPIPDHYACVVDILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVHKNIE 734

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           +G+ AA+ +LE +P D A+++LLSN YA  G W     +RK MK+R + KE G SWIE  
Sbjct: 735 IGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRDQVRKMMKDRGIRKEPGRSWIEVK 794

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           N VH F VG+  HP + +IY  L +L  ++ + GY  +   + HE E+EQK    F HSE
Sbjct: 795 NAVHAFFVGDRLHPLSDQIYKFLSELNDRLSKIGYKQENPNLFHEKEQEQKDPTAFVHSE 854

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           K+AVAFGL++     P+RV KNLRVC DCH+ +K  S VT REIVLRD  RFHH   G C
Sbjct: 855 KLAVAFGLMTLPPCIPLRVIKNLRVCDDCHSWMKCTSEVTRREIVLRDVYRFHHFNSGSC 914

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 915 SCGDYW 920



 Score =  289 bits (739), Expect = 6e-75,   Method: Compositional matrix adjust.
 Identities = 182/590 (30%), Positives = 314/590 (53%), Gaps = 12/590 (2%)

Query: 85  LKSCI-RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           L++C  R   + L   +H+      L  + +I N LI LY+K G + +A ++FK + + R
Sbjct: 49  LQACRGRGNRWPLVLEIHATSVVRGLGADRLIGNLLIDLYAKNGLVWQARQVFKEL-SSR 107

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           D VSW +M+S Y   G   +A  ++ +M      P  Y  S+V+ AC+  +  A G +I+
Sbjct: 108 DHVSWVAMLSGYAQSGLGKEAFRLYSQMHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIH 167

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             + K   F S+  VG ALI +++ G    + A +VF  M   + V +  +I+   Q G 
Sbjct: 168 AQVYKQA-FCSETFVGNALIALYL-GFGSFKLAERVFCDMLFCDRVTFNTLISGHAQCGH 225

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
              A+++F +M LSG  PD  T++ +++AC+ +     GKQLHS+ ++ G++ D     S
Sbjct: 226 GECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGS 285

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+D+Y KC   G ++ +  +F+     NV+ W  ++  Y Q     K + ++F  M    
Sbjct: 286 LLDLYVKC---GDIETAHDIFNLGDRTNVVLWNLMLVAYGQISDLAK-SFEIFGQMQATG 341

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + PN FT+  +L+ C       + EQ+++ ++K G   D  V   LI MY++ G ++ AR
Sbjct: 342 IHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNGFESDMYVSGVLIDMYSKYGCLDKAR 401

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           K  E L ++++VS+ +M+  Y ++   E+A     E++D GV       AS  S  + I 
Sbjct: 402 KILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASACAGIK 461

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           A+ +G QIHAR+  SG+ ++  I+N L+++Y+RC   E AF +F+E+E ++ I+W  +I+
Sbjct: 462 AMRQGLQIHARVYVSGYAADISIWNTLVNLYARCGRSEEAFSLFREIEHKDEITWNGLIS 521

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGI 622
           GF +     +AL +F KM   G K N  T+I+ +SA ++   I +G + H R++   H  
Sbjct: 522 GFGQSRLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHGRAVKTGH-- 579

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
               E    ++ L G+ GS+ +A      M L  +V  W T + +C  HG
Sbjct: 580 TSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEV-SWNTIITSCSQHG 628



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/518 (27%), Positives = 263/518 (50%), Gaps = 9/518 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  + A+   D M   G  PD  T + LL +C    +   GK +HS L ++ +  +
Sbjct: 220 HAQCGHGECALQIFDEMQLSGLRPDCVTVASLLAACASVGDLQKGKQLHSYLLKAGMSFD 279

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            +   SL+ LY KCGD+  A+ IF ++G++ ++V W+ M+ +Y        +  +F +M 
Sbjct: 280 YITEGSLLDLYVKCGDIETAHDIF-NLGDRTNVVLWNLMLVAYGQISDLAKSFEIFGQMQ 338

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN++ +  ++R C+ T  + +G  I+   +K G F+SD+ V   LIDM+ K    
Sbjct: 339 ATGIHPNQFTYPCILRTCTCTGQIELGEQIHSLSIKNG-FESDMYVSGVLIDMYSKYGC- 396

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A K+ + + +++ V WT MI    Q     +A+  F +M   G  PD   L+   SA
Sbjct: 397 LDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEEALATFKEMQDCGVWPDNIGLASAASA 456

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ ++    G Q+H+    +G A D+ +  +LV++YA+C   G  +++  +F  +   + 
Sbjct: 457 CAGIKAMRQGLQIHARVYVSGYAADISIWNTLVNLYARC---GRSEEAFSLFREIEHKDE 513

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W  +I+G+ QS    K+A+ +F  M Q     N FTF S + A  NL D    +QV+ 
Sbjct: 514 ITWNGLISGFGQS-RLYKQALMVFMKMGQAGAKYNVFTFISAISALANLADIKQGKQVHG 572

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            AVK G   +  V N+LIS+Y + G +EDA+  F  +  +N VS+NT++ + +++    +
Sbjct: 573 RAVKTGHTSETEVANALISLYGKCGSIEDAKMIFSEMSLRNEVSWNTIITSCSQHGRGLE 632

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALI 531
           A +L  +++  G+  +  TF  +L+  S +G + +G      +    G       Y  ++
Sbjct: 633 ALDLFDQMKQEGLKPNDVTFIGVLAACSHVGLVEEGLSYFKSMSNVYGLNPIPDHYACVV 692

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            +  R   ++ A +   EM    N + W ++++    H
Sbjct: 693 DILGRAGQLDRARRFVDEMPITANAMIWRTLLSACKVH 730



 Score =  221 bits (563), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 245/467 (52%), Gaps = 10/467 (2%)

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +D  +G  LID++ K  + +  A +VF +++ ++ V W  M++   Q G  ++A RL+  
Sbjct: 76  ADRLIGNLLIDLYAKNGL-VWQARQVFKELSSRDHVSWVAMLSGYAQSGLGKEAFRLYSQ 134

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M  +  +P  + LS V+SAC++ +LF  G+ +H+   +     +  VG +L+ +Y     
Sbjct: 135 MHWTAVIPTPYVLSSVLSACTKGKLFAQGRMIHAQVYKQAFCSETFVGNALIALYLGF-- 192

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            GS   + +VF  ML  + +++  +I+G+ Q  G  + A+++F +M    + P+  T AS
Sbjct: 193 -GSFKLAERVFCDMLFCDRVTFNTLISGHAQC-GHGECALQIFDEMQLSGLRPDCVTVAS 250

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           +L AC ++ D    +Q++++ +K G + D     SL+ +Y + G +E A   F      N
Sbjct: 251 LLAACASVGDLQKGKQLHSYLLKAGMSFDYITEGSLLDLYVKCGDIETAHDIFNLGDRTN 310

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +V +N M+ AY +  +  K+FE+  +++ TG+  + +T+  +L   +  G I  GEQIH+
Sbjct: 311 VVLWNLMLVAYGQISDLAKSFEIFGQMQATGIHPNQFTYPCILRTCTCTGQIELGEQIHS 370

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
             IK+GFES+  +   LI MYS+   ++ A ++ + +E R+V+SWTSMI G+ +H F   
Sbjct: 371 LSIKNGFESDMYVSGVLIDMYSKYGCLDKARKILEMLEKRDVVSWTSMIAGYVQHDFCEE 430

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           AL  F +M   G+ P+ I   +  SAC+    + +G +    +Y   G    +  +  +V
Sbjct: 431 ALATFKEMQDCGVWPDNIGLASAASACAGIKAMRQGLQIHARVYVS-GYAADISIWNTLV 489

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           +L  R G   EA    R +    D + W   +      G + L K A
Sbjct: 490 NLYARCGRSEEAFSLFREIE-HKDEITWNGLISG---FGQSRLYKQA 532


>gi|15220337|ref|NP_172596.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122213654|sp|Q3E6Q1.1|PPR32_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g11290
 gi|332190592|gb|AEE28713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 809

 Score =  543 bits (1398), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 288/780 (36%), Positives = 445/780 (57%), Gaps = 11/780 (1%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           +LLL+ C   +     + +  L+ ++ L         L+SL+ + G ++EA ++F+ + +
Sbjct: 41  ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           K +++ + +M+  +        A+  FV M      P  Y F+ +++ C +   + +G  
Sbjct: 98  KLNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+G L+K G F  D+     L +M+ K    +  A KVFD+M E++ V W  ++   +Q 
Sbjct: 157 IHGLLVKSG-FSLDLFAMTGLENMYAKCR-QVNEARKVFDRMPERDLVSWNTIVAGYSQN 214

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  R A+ +   M      P   T+  V+ A S L L + GK++H +A+R+G    V + 
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +LVDMYAKC   GS++ +R++FD ML+ NV+SW ++I  YVQ+    KEA+ +F  M+ 
Sbjct: 275 TALVDMYAKC---GSLETARQLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMLIFQKMLD 330

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V P   +    L AC +L D      ++  +V+ G   +  V NSLISMY +   ++ 
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   F  L  + LVS+N M+  +A+N     A     ++    V    +T+ S+++  + 
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +      + IH  +++S  + N  +  AL+ MY++C  +  A  +F  M +R+V +W +M
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I G+  HGF   ALE+F +M    IKPNG+T+++V+SACSH+GL+  G K F  M + + 
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           I   M+HY  MVDLLGR+G L EA +FI  MP+   V V+   LGAC++H +    + AA
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           E + E +P D   H+LL+N+Y +A  WE V  +R  M  + L K  GCS +E  N+VH F
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
             G T+HP + +IYA L++L   IKE GY+PDTN VL  +E + K Q L  HSEK+A++F
Sbjct: 691 FSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISF 749

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GL++T+    I V KNLRVC DCH A KYIS+VTGREIV+RD  RFHH K+G CSC DYW
Sbjct: 750 GLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 160/557 (28%), Positives = 280/557 (50%), Gaps = 26/557 (4%)

Query: 44  EPLSNRL--IYHL------NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           EP+ ++L  +YH           + KA+     M      P +  ++ LLK C       
Sbjct: 93  EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELR 152

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           +GK +H LL +S    +   +  L ++Y+KC  +NEA K+F  M  +RD+VSW+++++ Y
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGY 211

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              G    A+ M   M E    P+     +V+ A S    +++G  I+G+ ++ G FDS 
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG-FDSL 270

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V +  AL+DM+ K GS  LE+A ++FD M E+N V W  MI    Q   P++A+ +F  M
Sbjct: 271 VNISTALVDMYAKCGS--LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +  G  P   ++ G + AC++L     G+ +H  ++  GL  +V V  SL+ MY KC   
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK-- 386

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
             VD +  +F ++    ++SW A+I G+ Q+ GR  +A+  FS M    V P+ FT+ SV
Sbjct: 387 -EVDTAASMFGKLQSRTLVSWNAMILGFAQN-GRPIDALNYFSQMRSRTVKPDTFTYVSV 444

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESLFEK 452
           + A   L  ++ A+  + H V     LD    V  +L+ MYA+ G +  AR  F+ + E+
Sbjct: 445 ITAIAELSITHHAK--WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           ++ ++N M+D Y  +   + A EL  E++   +  +  TF S++S  S  G +  G +  
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562

Query: 513 ARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKH-- 568
             + ++   E +   Y A++ +  R   +  A+    +M  +  ++ + +M+     H  
Sbjct: 563 YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKN 622

Query: 569 -GFAARALEIFYKMLAD 584
             FA +A E  +++  D
Sbjct: 623 VNFAEKAAERLFELNPD 639


>gi|357495039|ref|XP_003617808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519143|gb|AET00767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 811

 Score =  542 bits (1397), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/788 (36%), Positives = 476/788 (60%), Gaps = 12/788 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHL-GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           D  +Y+ +L+  IR+    + GK +H  + +     +    N L++ Y +   L +A+K+
Sbjct: 33  DSHSYAHMLQQIIRNGADPIAGKHLHCHILKRGTSLDLFAQNILLNFYVQSNSLQDASKL 92

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  + + +S+ ++   Y    +   A+H  + + + G   N + F+ +++   + + 
Sbjct: 93  FDEMP-QTNTISFVTLAQGYSRDHQFHQALHFILRIFKEGHEVNPFVFTTLLKLLVSMDL 151

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLM 254
             +   ++  + K G+  +D  VG ALID + V+G+VD+  A  VFD +  K+ V WT M
Sbjct: 152 AHLCWTLHACVYKLGHH-ADAFVGTALIDAYSVRGNVDV--ARHVFDDICCKDMVSWTGM 208

Query: 255 ITRCTQLGC-PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           +  C    C   ++++LF  M + G+ P+ FT+SG + +C  LE F  GK +H  A++  
Sbjct: 209 VA-CYAENCFYEESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGC 267

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              D+ VG +L+++YAK    G + D++++F+ M   +++ W+ +I  Y QS  R KEA+
Sbjct: 268 YDHDLFVGIALLELYAK---SGEIIDAQRLFEEMPKTDLIPWSLMIARYAQSD-RSKEAL 323

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            LF  M Q  V PN+FTFASVL+AC + +  ++ +Q+++  +K G   +  V N+++ +Y
Sbjct: 324 DLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCVLKFGLNSNVFVSNAIMDVY 383

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+ G +E++ K FE L ++N V++NT++  Y +  + E+A  L   + +  +  +  T++
Sbjct: 384 AKCGEIENSMKLFEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYS 443

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+L  ++S+ A+  G QIH+  IK+ +  +  + N+LI MY++C  +  A   F +M  R
Sbjct: 444 SVLRASASLAALEPGLQIHSLTIKTMYNKDTVVANSLIDMYAKCGRINDARLTFDKMNKR 503

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           + +SW +MI G++ HG +  AL +F  M     KPN +T++ VLSACS+AGL+ +G  HF
Sbjct: 504 DEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKGQAHF 563

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            SM  ++ I   +EHY CMV LLGR G   EA++ I  +     V+VWR  LGAC +H  
Sbjct: 564 ESMSKDYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGACVIHKK 623

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            +LG+  A+ +LE +P D A H+LLSN+YA+AG W+ VA +RK M+++ + KE G SW+E
Sbjct: 624 VDLGRVCAQHVLEMEPHDDATHVLLSNMYATAGRWDNVAFVRKYMQKKKVRKEPGLSWVE 683

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
               VH F VG+TSHP    I A L+ L  K ++ GY+PD N VL ++++++K ++L+ H
Sbjct: 684 NQGVVHYFSVGDTSHPDIKLICAMLEWLNKKTRDAGYVPDCNAVLLDVQDDEKERHLWVH 743

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SE++A+A+GLI T  S  IR+ KNLR+C DCHT +K IS V  REIV+RD NRFHH + G
Sbjct: 744 SERLALAYGLIRTPLSCSIRIIKNLRICIDCHTVMKLISKVVQREIVIRDINRFHHFRHG 803

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 804 VCSCGDYW 811



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 123/409 (30%), Positives = 219/409 (53%), Gaps = 15/409 (3%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++++   + M   G  P+  T S  LKSC+    F++GK VH    +   + +  +  +L
Sbjct: 219 EESLQLFNQMRIMGYKPNNFTISGALKSCLGLEAFNVGKSVHGCALKGCYDHDLFVGIAL 278

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + LY+K G++ +A ++F+ M  K D++ WS MI+ Y    +  +A+ +F+ M +    PN
Sbjct: 279 LELYAKSGEIIDAQRLFEEMP-KTDLIPWSLMIARYAQSDRSKEALDLFLRMRQTSVVPN 337

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
            + F++V++AC+++ ++ +G  I+  +LK G  +S+V V  A++D++ K   ++E++ K+
Sbjct: 338 NFTFASVLQACASSVSLDLGKQIHSCVLKFG-LNSNVFVSNAIMDVYAKCG-EIENSMKL 395

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F+++ ++N V W  +I    QLG    A+ LF  M+     P   T S V+ A + L   
Sbjct: 396 FEELPDRNDVTWNTIIVGYVQLGDGERAMNLFTHMLEHDMQPTEVTYSSVLRASASLAAL 455

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G Q+HS  I+T    D  V  SL+DMYAKC   G ++D+R  FD+M   + +SW A+I
Sbjct: 456 EPGLQIHSLTIKTMYNKDTVVANSLIDMYAKC---GRINDARLTFDKMNKRDEVSWNAMI 512

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKR 417
            GY    G   EA+ LF  M      PN  TF  VL AC N  LL      Q +  ++ +
Sbjct: 513 CGYSMH-GMSMEALNLFDMMQHTDCKPNKLTFVGVLSACSNAGLLYKG---QAHFESMSK 568

Query: 418 GRALDDCVGN--SLISMYARSGRMEDARKAF-ESLFEKNLVSYNTMVDA 463
              +  C+ +   ++ +  R GR ++A K   E  ++ +++ +  ++ A
Sbjct: 569 DYDIKPCIEHYTCMVWLLGRLGRFDEAMKLIGEIAYQPSVMVWRALLGA 617



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 78/259 (30%), Positives = 137/259 (52%), Gaps = 3/259 (1%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P S  +  +    R ++A+     M Q    P+  T++ +L++C  S +  LGK +HS +
Sbjct: 305 PWSLMIARYAQSDRSKEALDLFLRMRQTSVVPNNFTFASVLQACASSVSLDLGKQIHSCV 364

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            +  L  N  + N+++ +Y+KCG++  + K+F+ + ++ D V+W+++I  YV  G    A
Sbjct: 365 LKFGLNSNVFVSNAIMDVYAKCGEIENSMKLFEELPDRND-VTWNTIIVGYVQLGDGERA 423

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           +++F  MLE    P E  +S+V+RA ++   +  G  I+   +K  Y + D  V  +LID
Sbjct: 424 MNLFTHMLEHDMQPTEVTYSSVLRASASLAALEPGLQIHSLTIKTMY-NKDTVVANSLID 482

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K    +  A   FDKM +++ V W  MI   +  G   +A+ LF  M  +   P++ 
Sbjct: 483 MYAKCG-RINDARLTFDKMNKRDEVSWNAMICGYSMHGMSMEALNLFDMMQHTDCKPNKL 541

Query: 285 TLSGVVSACSELELFTSGK 303
           T  GV+SACS   L   G+
Sbjct: 542 TFVGVLSACSNAGLLYKGQ 560


>gi|359488555|ref|XP_003633777.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like, partial [Vitis vinifera]
          Length = 825

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 285/751 (37%), Positives = 446/751 (59%), Gaps = 8/751 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N+V  N +IS Y K G+L EA K+F  M  +R  V+W+ +I  Y    +  +A  +FV+M
Sbjct: 82  NTVSTNMMISGYVKSGNLGEARKLFDGMV-ERTAVTWTILIGGYSQLNQFKEAFELFVQM 140

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+   F  ++  C+  E       +   ++K GY DS + VG  L+D + K S 
Sbjct: 141 QRCGTEPDYVTFVTLLSGCNGHEMGNQITQVQTQIIKLGY-DSRLIVGNTLVDSYCK-SN 198

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+ A ++F +M E ++V +  MIT  ++ G    A+ LF++M  SG  P  FT + V+ 
Sbjct: 199 RLDLACQLFKEMPEIDSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLC 258

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A   L+    G+Q+HS+ I+T    +V V  +L+D Y+K     SV D+RK+FD M + +
Sbjct: 259 ANIGLDDIVLGQQIHSFVIKTNFVWNVFVSNALLDFYSK---HDSVIDARKLFDEMPEQD 315

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            +S+  II+GY   G + K A  LF ++         F FA++L    N LD  +  Q++
Sbjct: 316 GVSYNVIISGYAWDG-KHKYAFDLFRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIH 374

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +      +  VGNSL+ MYA+ G+ E+A   F +L  ++ V +  M+ AY +    E
Sbjct: 375 AQTIVTTADSEILVGNSLVDMYAKCGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYE 434

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +  +L +++    V     TFASLL  ++SI ++  G+Q+H+ IIKSGF SN    +AL+
Sbjct: 435 EGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALL 494

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            +Y++C +++ A Q F+EM DRN++SW +MI+ +A++G A   L+ F +M+  G++P+ +
Sbjct: 495 DVYAKCGSIKDAVQTFQEMPDRNIVSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSV 554

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           +++ VLSACSH+GL+ EG  HF SM   + +  R EHYA +VD+L RSG   EA + +  
Sbjct: 555 SFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAE 614

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE-QDPQDPAAHILLSNLYASAGHWEY 710
           MP+  D ++W + L ACR+H + EL + AA+ +   ++ +D A ++ +SN+YA+AG WE 
Sbjct: 615 MPIDPDEIMWSSVLNACRIHKNQELARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWEN 674

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V+ + K M++R + K    SW+E  ++ H F   +  HP+  EI  ++D L   ++E GY
Sbjct: 675 VSKVHKAMRDRGVKKLPAYSWVEIKHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGY 734

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
            PDT+  LH  +E+ KV+ L  HSE++A+AF LIST +  PI V KNLR C DCH AIK 
Sbjct: 735 KPDTSCALHNEDEKFKVESLKYHSERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKV 794

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS + GREI +RDS RFHH +DG CSC D+W
Sbjct: 795 ISKIVGREITVRDSTRFHHFRDGFCSCGDFW 825



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 218/426 (51%), Gaps = 21/426 (4%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DG  +KA+     M   G  P   T++ +L + I   +  LG+ +HS + ++    N  +
Sbjct: 228 DGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFVWNVFV 287

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+  YSK   + +A K+F  M  ++D VS++ +IS Y   GK   A  +F E+    
Sbjct: 288 SNALLDFYSKHDSVIDARKLFDEMP-EQDGVSYNVIISGYAWDGKHKYAFDLFRELQFTA 346

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           F   ++ F+ ++   SNT +  +G  I+   +     DS++ VG +L+DM+ K     E 
Sbjct: 347 FDRKQFPFATMLSIASNTLDWEMGRQIHAQTI-VTTADSEILVGNSLVDMYAKCG-KFEE 404

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +F  +T ++ V WT MI+   Q G   + ++LF  M  +  + D+ T + ++ A + 
Sbjct: 405 AEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASAS 464

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           +   + GKQLHS+ I++G   +V  G +L+D+YAKC   GS+ D+ + F  M D N++SW
Sbjct: 465 IASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKC---GSIKDAVQTFQEMPDRNIVSW 521

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN-------LLDSNVAE 408
            A+I+ Y Q+ G  +  +K F +M+   + P+  +F  VL AC +       L   N   
Sbjct: 522 NAMISAYAQN-GEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMT 580

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN 467
           Q+Y    +R          S++ M  RSGR  +A K    +  + + + ++++++A   +
Sbjct: 581 QIYKLDPRREHYA------SVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIH 634

Query: 468 LNSEKA 473
            N E A
Sbjct: 635 KNQELA 640



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 125/507 (24%), Positives = 222/507 (43%), Gaps = 70/507 (13%)

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--- 366
           ++TG   D       V  + K   +G +  +R++F++M   N +S   +I+GYV+SG   
Sbjct: 44  VKTGFDPDTSRSNFRVGNFLK---NGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLG 100

Query: 367 ---------------------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
                                       + KEA +LF  M +    P++ TF ++L  C 
Sbjct: 101 EARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCN 160

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
                N   QV T  +K G      VGN+L+  Y +S R++ A + F+ + E + VSYN 
Sbjct: 161 GHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEIDSVSYNA 220

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+  Y+K+   EKA  L  E++++G+  + +TFA++L     +  I  G+QIH+ +IK+ 
Sbjct: 221 MITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVLCANIGLDDIVLGQQIHSFVIKTN 280

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F  N  + NAL+  YS+  +V  A ++F EM +++ +S+  +I+G+A  G    A ++F 
Sbjct: 281 FVWNVFVSNALLDFYSKHDSVIDARKLFDEMPEQDGVSYNVIISGYAWDGKHKYAFDLFR 340

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC---MVDLL 636
           ++           +  +LS  S+    +  W+  R ++ +  +            +VD+ 
Sbjct: 341 ELQFTAFDRKQFPFATMLSIASN----TLDWEMGRQIHAQTIVTTADSEILVGNSLVDMY 396

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG------KHAAEMILEQDPQ 690
            + G   EA E I +       + W   + A    G  E G         A +I +Q   
Sbjct: 397 AKCGKFEEA-EMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQ--- 452

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
                   S L ASA     +A++    +  + I ++G            F     S   
Sbjct: 453 ----ATFASLLRASAS----IASLSLGKQLHSFIIKSG------------FMSNVFSGSA 492

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFV 777
            L++YA+   +   ++ F  +PD N V
Sbjct: 493 LLDVYAKCGSIKDAVQTFQEMPDRNIV 519



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 128/282 (45%), Gaps = 36/282 (12%)

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
           NV   +    VK G   D    N  +  + ++G +  AR+ FE +  KN VS N M+  Y
Sbjct: 34  NVVNNIDARIVKTGFDPDTSRSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGY 93

Query: 465 AKNLN-------------------------------SEKAFELLHEIEDTGVGTSAYTFA 493
            K+ N                                ++AFEL  +++  G      TF 
Sbjct: 94  VKSGNLGEARKLFDGMVERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFV 153

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           +LLSG +      +  Q+  +IIK G++S   + N L+  Y +   ++ A Q+FKEM + 
Sbjct: 154 TLLSGCNGHEMGNQITQVQTQIIKLGYDSRLIVGNTLVDSYCKSNRLDLACQLFKEMPEI 213

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL--ISEGWK 611
           + +S+ +MITG++K G   +A+ +F +M   G+KP   T+ AVL  C++ GL  I  G +
Sbjct: 214 DSVSYNAMITGYSKDGLDEKAVNLFVEMQNSGLKPTEFTFAAVL--CANIGLDDIVLG-Q 270

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
              S   +   V  +     ++D   +  S+ +A +    MP
Sbjct: 271 QIHSFVIKTNFVWNVFVSNALLDFYSKHDSVIDARKLFDEMP 312



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 54/215 (25%), Positives = 106/215 (49%), Gaps = 3/215 (1%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P +  +  ++  G  ++ +   + M Q     D  T++ LL++     +  LGK +HS +
Sbjct: 419 PWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASLLRASASIASLSLGKQLHSFI 478

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            +S    N    ++L+ +Y+KCG + +A + F+ M + R+IVSW++MIS+Y   G+    
Sbjct: 479 IKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPD-RNIVSWNAMISAYAQNGEAEAT 537

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           +  F EM+  G  P+   F  V+ ACS++  V  G   +  + +    D       +++D
Sbjct: 538 LKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNSMTQIYKLDPRREHYASVVD 597

Query: 225 MFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           M  + S     A K+  +M  + + + W+ ++  C
Sbjct: 598 MLCR-SGRFNEAEKLMAEMPIDPDEIMWSSVLNAC 631


>gi|359486639|ref|XP_002284011.2| PREDICTED: pentatricopeptide repeat-containing protein At2g39620-like
            [Vitis vinifera]
          Length = 1005

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 279/770 (36%), Positives = 452/770 (58%), Gaps = 10/770 (1%)

Query: 93   NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
            N  L + +H  + R     +S + N LI LYSKCGD++ A ++F  M ++ D VSW +M+
Sbjct: 245  NIELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDD-VSWGTMM 301

Query: 153  SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
            + Y + G  V+ + +F +M       N+    +   A + T ++  G  I+G  L+    
Sbjct: 302  AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ-QRI 360

Query: 213  DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
            DSD+ V   L+ M+ K   + E A ++F  +  ++ V W+ +I    Q G P +A+ LF 
Sbjct: 361  DSDILVATPLMVMYAKCG-ETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419

Query: 273  DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            +M      P+R TL  ++ AC++L L   GK +H + ++  +  D+  G +LV MYAKC 
Sbjct: 420  EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKC- 478

Query: 333  VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
              G    +   F+RM   ++++W ++I GY Q G     A+ +F  +    + P+  T  
Sbjct: 479  --GFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD-PYNAIDMFYKLRLSAINPDAGTMV 535

Query: 393  SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF-ESLFE 451
             V+ AC  L D +    ++   VK G   D  V N+LI MYA+ G +  A   F ++ F 
Sbjct: 536  GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFT 595

Query: 452  KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            K+ V++N ++ AY +N ++++A    H++       ++ TF S+L  A+ + A  +G   
Sbjct: 596  KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655

Query: 512  HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
            HA II+ GF SN  + N+LI MY++C  ++ + ++F EM+ ++ +SW +M++G+A HG  
Sbjct: 656  HACIIQMGFLSNTLVGNSLIDMYAKCGQLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715

Query: 572  ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             RA+ +F  M    ++ + +++++VLSAC HAGL+ EG K F SM D++ I   +EHYAC
Sbjct: 716  DRAIALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775

Query: 632  MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
            MVDLLGR+G   E L FI+ MP+  D  VW   LG+CR+H + +LG+ A + +++ +P++
Sbjct: 776  MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835

Query: 692  PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
            PA  ++LS++YA +G W      R +M +  L K  GCSW+E  NKVH F VG+ SHP+ 
Sbjct: 836  PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895

Query: 752  LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
              ++   + L  K+++ GY+PD + VL  +EEE K  +L+ HSE++A+ F L++T     
Sbjct: 896  ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955

Query: 812  IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            I++ KNLRVC DCHT  K+IS +T R I++RD+ RFHH +DG CSCNDYW
Sbjct: 956  IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 316/639 (49%), Gaps = 13/639 (2%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F + P  S  L N +I  +    +  +A+     M +KG  PD  T++ +LK+C  + N 
Sbjct: 86  FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNL 145

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G   H  + R  LE +  I   L+ +YSK GDL  A ++F  M  KRD+V+W++MI+ 
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-KRDVVAWNAMIAG 204

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
                   +A+  F  M  +G  P+      +        N+ +   I+G++ +    D 
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFR---RDF 261

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
              V   LID++ K   D++ A +VFD+M +++ V W  M+      GC  + + LF  M
Sbjct: 262 SSAVSNGLIDLYSKCG-DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            L     ++ +      A +E      GK++H  A++  +  D+ V   L+ MYAKC   
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC--- 377

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G  + ++++F  +   ++++W+AII   VQ+ G  +EA+ LF +M   ++ PN  T  S+
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQT-GYPEEALSLFQEMQNQKMKPNRVTLMSI 436

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L AC +L    + + ++   VK     D   G +L+SMYA+ G    A   F  +  +++
Sbjct: 437 LPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDI 496

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           V++N++++ YA+  +   A ++ +++  + +   A T   ++   + +  + +G  IH  
Sbjct: 497 VTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGL 556

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAAR 573
           I+K GFES+  + NALI MY++C ++ +A  +F + +  ++ ++W  +I  + ++G A  
Sbjct: 557 IVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKE 616

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           A+  F++M  +   PN +T+++VL A ++     EG   F +   + G +        ++
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLSNTLVGNSLI 675

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           D+  + G L  + +    M    D + W   L    VHG
Sbjct: 676 DMYAKCGQLDYSEKLFNEMD-HKDTVSWNAMLSGYAVHG 713



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 212/439 (48%), Gaps = 10/439 (2%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD     + + W  MI   T+     +A+ ++  M+  G  PD++T + V+ AC+ 
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 G   H    R GL  DV +G  LVDMY+K    G +  +R+VFD+M   +V++W
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM---GDLKRAREVFDKMPKRDVVAW 198

Query: 356 TAIITGYVQSGGRDK-EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
            A+I G  QS   D  EAV  F  M    V P+  +  ++      L +  +   ++ + 
Sbjct: 199 NAMIAGLSQS--EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
            +R       V N LI +Y++ G ++ AR+ F+ + +++ VS+ TM+  YA N    +  
Sbjct: 257 FRRD--FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           EL  +++   V  +  +  S    A+    + KG++IH   ++   +S+  +   L+ MY
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C   E A Q+F  ++ R++++W+++I    + G+   AL +F +M    +KPN +T +
Sbjct: 375 AKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLM 434

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L AC+   L+  G K       +  +   +     +V +  + G  T AL     M  
Sbjct: 435 SILPACADLSLLKLG-KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS- 492

Query: 655 SADVLVWRTFLGACRVHGD 673
           S D++ W + +      GD
Sbjct: 493 SRDIVTWNSLINGYAQIGD 511



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 220/474 (46%), Gaps = 52/474 (10%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVG--CSLVDMYAKCTVDGSVDDSRKVFDR 346
           ++S+C  L       Q+H+  I +G      +    +L  ++ KC      D +R VFD 
Sbjct: 38  LLSSCKHLNPLL---QIHAQIIVSGFKHHHSITHLINLYSLFHKC------DLARSVFDS 88

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
             + + + W ++I  Y +S   + EA++++  M++  + P+ +TF  VLKAC   L  N+
Sbjct: 89  TPNPSRILWNSMIRAYTRSKQYN-EALEMYYCMVEKGLEPDKYTFTFVLKACTGAL--NL 145

Query: 407 AEQVYTHAV--KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
            E V+ H    +RG   D  +G  L+ MY++ G ++ AR+ F+ + ++++V++N M+   
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           +++ +  +A +    ++  GV  S+ +  +L  G   +  I     IH  + +  F S  
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS-- 263

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + N LI +YS+C +V+ A +VF +M D++ +SW +M+ G+A +G     LE+F KM   
Sbjct: 264 AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLG 323

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWK------------------HFRSMYDEHGIVQRM 626
            ++ N ++ ++   A +    + +G +                      MY + G  ++ 
Sbjct: 324 NVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKA 383

Query: 627 EH------------YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVH 671
           +             ++ ++  L ++G   EAL   + M    +  + +   + L AC   
Sbjct: 384 KQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADL 443

Query: 672 GDTELGKHAAEMILEQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
              +LGK      ++ D   D +    L ++YA  G +        RM  R+++
Sbjct: 444 SLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 181/420 (43%), Gaps = 52/420 (12%)

Query: 36  FIAQPTTSEPLSNRLIYHLND--------GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           F A  TT   +S+R I   N         G    AI     +     +PD  T   ++ +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C    +   G  +H L+ +   E +  + N+LI +Y+KCG L  A  +F      +D V+
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W+ +I++Y+  G   +AI  F +M    F PN   F +V+ A +       G   +  ++
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           + G+  S+  VG +LIDM+ K    L+ + K+F++M  K+TV W  M++     G    A
Sbjct: 661 QMGFL-SNTLVGNSLIDMYAKCG-QLDYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRA 718

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVD 326
           I LF  M  S    D  +   V+SAC    L   G+++ HS + +  +  D+     +VD
Sbjct: 719 IALFSLMQESQVQIDSVSFVSVLSACRHAGLVEEGRKIFHSMSDKYHIKPDLEHYACMVD 778

Query: 327 MYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           +  +    G  D++      M ++ +   W A++            + ++ S++  G+VA
Sbjct: 779 LLGRA---GLFDETLGFIKVMPVEPDAGVWGALLG-----------SCRMHSNVKLGEVA 824

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            +H            L   N A  V                  L S+YA+SGR  DA KA
Sbjct: 825 LDHLV---------KLEPRNPAHFVV-----------------LSSIYAQSGRWADAGKA 858



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 133/285 (46%), Gaps = 16/285 (5%)

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N+  +  +L +C +L   N   Q++   +  G      + + LI++Y+   + + AR  F
Sbjct: 31  NYLHYPRLLSSCKHL---NPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF 86

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           +S    + + +N+M+ AY ++    +A E+ + + + G+    YTF  +L   +    + 
Sbjct: 87  DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G   H  I + G E +  I   L+ MYS+  +++ A +VF +M  R+V++W +MI G +
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           +      A++ F  M   G++P+ ++ + +         I    +  RS+   HG V R 
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI----ELCRSI---HGYVFRR 259

Query: 627 EHYAC----MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +  +     ++DL  + G +  A      M +  D + W T +  
Sbjct: 260 DFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303


>gi|302754942|ref|XP_002960895.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
 gi|300171834|gb|EFJ38434.1| hypothetical protein SELMODRAFT_74842 [Selaginella moellendorffii]
          Length = 903

 Score =  542 bits (1396), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 290/813 (35%), Positives = 478/813 (58%), Gaps = 24/813 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++AI     M Q+G   D  T+  +LK+C R  +   G+ +H+ +  S L+  SV+ 
Sbjct: 107 GQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLKGKSVLA 166

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N L+ +Y  CG +  A  +F+ M  +RD+VSW++ I++    G    A+ +F  M   G 
Sbjct: 167 NLLLHIYGSCGCVASAMLLFEKM--ERDLVSWNAAIAANAQSGDLGIALELFQRMQLEGV 224

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P        +  C+        H    F+++    +  + V  AL   + +    L  A
Sbjct: 225 RPARITLVIALTVCATIRQAQAIH----FIVRESGLEQTLVVSTALASAYARLG-HLYQA 279

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VFD+  E++ V W  M+    Q G   +A  LF  M+  G  P + TL    + CS L
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGISPSKVTLVNASTGCSSL 339

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+ +H  A+  GL  D+ +G +L+DMY +C   GS +++R +F R +  N +SW 
Sbjct: 340 RF---GRMIHGCALEKGLDRDIVLGNALLDMYTRC---GSPEEARHLFKR-IPCNAVSWN 392

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA----EQVYT 412
            +I G  Q G + K AV+LF  M    +AP   T+ ++L+A  +  +   A     ++++
Sbjct: 393 TMIAGSSQKG-QMKRAVELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHS 451

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE--SLFEK-NLVSYNTMVDAYAKNLN 469
             V  G A +  +G +++ MYA  G +++A  +F+  ++ ++ ++VS+N ++ + +++ +
Sbjct: 452 RIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            ++A      ++  GV  +  T  ++L   +   A+ +GE +H  +  SG ESN  +  A
Sbjct: 512 GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGEIVHDHLRHSGMESNLFVATA 571

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           L SMY RC ++E+A ++F+++  +R+V+ + +MI  ++++G A  AL++F++M  +G +P
Sbjct: 572 LASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRP 631

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           +  ++++VLSACSH GL  EGW+ FRSM   +GI    +HYAC VD+LGR+G L +A E 
Sbjct: 632 DEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEEL 691

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           IR M +   VLVW+T LGACR + D + G+ A  M+ E DP D +A+++LSN+ A AG W
Sbjct: 692 IRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKW 751

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           +  A +R  M+ R L KEAG SWIE  ++VH+F  G+ SHP++ EIY EL++L  +I+E 
Sbjct: 752 DEAAEVRTEMESRGLRKEAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREI 811

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+PDT  VL +++E +K + L QHSE++A+A G++S+S +  +RV KNLRVC DCH A 
Sbjct: 812 GYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS-TDTVRVMKNLRVCEDCHNAT 870

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS +  +EIV+RD++RFHH  DG CSC DYW
Sbjct: 871 KFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 135/495 (27%), Positives = 234/495 (47%), Gaps = 27/495 (5%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           ++RA  +   ++ G  I+  ++  G  +    +G  L+ +++K    L    +VF ++  
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCE-SLGDVEEVFSRLEV 90

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++   WT +IT  T+ G  + AI +F  M   G   D  T   V+ AC+ L   + G+ +
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+W + +GL     +   L+ +Y  C   G V  +  +F++M + +++SW A I    QS
Sbjct: 151 HAWIVESGLKGKSVLANLLLHIYGSC---GCVASAMLLFEKM-ERDLVSWNAAIAANAQS 206

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-- 423
           G     A++LF  M    V P   T    L  C  +  +        H + R   L+   
Sbjct: 207 GDLGI-ALELFQRMQLEGVRPARITLVIALTVCATIRQAQA-----IHFIVRESGLEQTL 260

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V  +L S YAR G +  A++ F+   E+++VS+N M+ AYA++ +  +A  L   +   
Sbjct: 261 VVSTALASAYARLGHLYQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+  S  T  +  +G SS+     G  IH   ++ G + +  + NAL+ MY+RC + E A
Sbjct: 321 GISPSKVTLVNASTGCSSLRF---GRMIHGCALEKGLDRDIVLGNALLDMYTRCGSPEEA 377

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS-- 601
             +FK +   N +SW +MI G ++ G   RA+E+F +M  +G+ P   TY+ +L A +  
Sbjct: 378 RHLFKRIPC-NAVSWNTMIAGSSQKGQMKRAVELFQRMQLEGMAPVRATYLNLLEAVASN 436

Query: 602 --HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE-ALEFIR-SMPLSAD 657
              A  ++EG K   S     G          +V +    G++ E A  F R +M    D
Sbjct: 437 PEEARAMAEGRK-LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495

Query: 658 VLVWRTFLGACRVHG 672
           V+ W   + +   HG
Sbjct: 496 VVSWNAIISSLSQHG 510



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/291 (28%), Positives = 144/291 (49%), Gaps = 10/291 (3%)

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
           G   P H     +L+A G+  D  +++    HA      L++ +GN L+ +Y +   + D
Sbjct: 25  GATRPAHLV--RLLRAAGD--DRLLSQGRRIHARIVSLGLEEELGNHLLRLYLKCESLGD 80

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
             + F  L  ++  S+ T++ AY ++  +++A  + H ++  GV   A TF ++L   + 
Sbjct: 81  VEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIGMFHRMQQEGVRCDAVTFLAVLKACAR 140

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +G + +G  IHA I++SG +    + N L+ +Y  C  V +A  +F++ME R+++SW + 
Sbjct: 141 LGDLSQGRSIHAWIVESGLKGKSVLANLLLHIYGSCGCVASAMLLFEKME-RDLVSWNAA 199

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I   A+ G    ALE+F +M  +G++P  IT +  L+ C  A +      HF  +  E G
Sbjct: 200 IAANAQSGDLGIALELFQRMQLEGVRPARITLVIALTVC--ATIRQAQAIHF--IVRESG 255

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           + Q +     +     R G L +A E         DV+ W   LGA   HG
Sbjct: 256 LEQTLVVSTALASAYARLGHLYQAKEVF-DRAAERDVVSWNAMLGAYAQHG 305


>gi|356521082|ref|XP_003529187.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Glycine max]
          Length = 780

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 291/787 (36%), Positives = 476/787 (60%), Gaps = 10/787 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  +Y+ +L+  IR+R+ + GK +H  + +     +    N L++ Y   G L +A+K+F
Sbjct: 2   DSHSYANMLQQAIRNRDPNAGKSLHCHILKHGASLDLFAQNILLNTYVHFGFLEDASKLF 61

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M    + VS+ ++   +    +   A  + + +   G+  N++ F+ +++   + +  
Sbjct: 62  DEMP-LTNTVSFVTLAQGFSRSHQFQRARRLLLRLFREGYEVNQFVFTTLLKLLVSMDLA 120

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
                ++ ++ K G+  +D  VG ALID + V G+VD  +A +VFD +  K+ V WT M+
Sbjct: 121 DTCLSVHAYVYKLGH-QADAFVGTALIDAYSVCGNVD--AARQVFDGIYFKDMVSWTGMV 177

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               +  C  D++ LF  M + G+ P+ FT+S  + +C+ LE F  GK +H  A++    
Sbjct: 178 ACYAENYCHEDSLLLFCQMRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYD 237

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D+ VG +L+++Y K    G + ++++ F+ M   +++ W+ +I+ Y QS  + KEA++L
Sbjct: 238 RDLYVGIALLELYTK---SGEIAEAQQFFEEMPKDDLIPWSLMISRYAQSD-KSKEALEL 293

Query: 376 FSDMIQGQVA-PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           F  M Q  V  PN+FTFASVL+AC +L+  N+  Q+++  +K G   +  V N+L+ +YA
Sbjct: 294 FCRMRQSSVVVPNNFTFASVLQACASLVLLNLGNQIHSCVLKVGLDSNVFVSNALMDVYA 353

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +E++ K F    EKN V++NT++  Y +  + EKA  L   +    +  +  T++S
Sbjct: 354 KCGEIENSVKLFTGSTEKNEVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSS 413

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L  ++S+ A+  G QIH+  IK+ +  +  + N+LI MY++C  ++ A   F +M+ ++
Sbjct: 414 VLRASASLVALEPGRQIHSLTIKTMYNKDSVVANSLIDMYAKCGRIDDARLTFDKMDKQD 473

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
            +SW ++I G++ HG    AL +F  M     KPN +T++ VLSACS+AGL+ +G  HF+
Sbjct: 474 EVSWNALICGYSIHGLGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRAHFK 533

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM  ++GI   +EHY CMV LLGRSG   EA++ I  +P    V+VWR  LGAC +H + 
Sbjct: 534 SMLQDYGIEPCIEHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNL 593

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           +LGK  A+ +LE +PQD A H+LLSN+YA+A  W+ VA +RK MK++ + KE G SW+E 
Sbjct: 594 DLGKVCAQRVLEMEPQDDATHVLLSNMYATAKRWDNVAYVRKNMKKKKVKKEPGLSWVEN 653

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
              VH F VG+TSHP    I+A L+ L  K ++ GY+PD + VL ++E+++K + L+ HS
Sbjct: 654 QGVVHYFTVGDTSHPNIKLIFAMLEWLYKKTRDAGYVPDCSVVLLDVEDDEKERLLWMHS 713

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           E++A+AFGLI       IR+ KNLR+C DCH  IK +S +  REIV+RD NRFHH + G 
Sbjct: 714 ERLALAFGLIQIPSGCSIRIIKNLRICVDCHAVIKLVSKIVQREIVIRDINRFHHFRQGV 773

Query: 855 CSCNDYW 861
           CSC DYW
Sbjct: 774 CSCGDYW 780



 Score =  199 bits (505), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 139/412 (33%), Positives = 218/412 (52%), Gaps = 18/412 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T S  LKSC     F +GK VH    +   + +  +  +L+ LY+K G+
Sbjct: 196 MRIMGYRPNNFTISAALKSCNGLEAFKVGKSVHGCALKVCYDRDLYVGIALLELYTKSGE 255

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVI 187
           + EA + F+ M  K D++ WS MIS Y    K  +A+ +F  M +     PN + F++V+
Sbjct: 256 IAEAQQFFEEMP-KDDLIPWSLMISRYAQSDKSKEALELFCRMRQSSVVVPNNFTFASVL 314

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           +AC++   + +G+ I+  +LK G  DS+V V  AL+D++ K   ++E++ K+F   TEKN
Sbjct: 315 QACASLVLLNLGNQIHSCVLKVG-LDSNVFVSNALMDVYAKCG-EIENSVKLFTGSTEKN 372

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  +I    QLG    A+ LF +M+     P   T S V+ A + L     G+Q+HS
Sbjct: 373 EVAWNTIIVGYVQLGDGEKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHS 432

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             I+T    D  V  SL+DMYAKC   G +DD+R  FD+M   + +SW A+I GY    G
Sbjct: 433 LTIKTMYNKDSVVANSLIDMYAKC---GRIDDARLTFDKMDKQDEVSWNALICGY-SIHG 488

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCV 425
              EA+ LF  M Q    PN  TF  VL AC N  LLD   A   +  ++ +   ++ C+
Sbjct: 489 LGMEALNLFDMMQQSNSKPNKLTFVGVLSACSNAGLLDKGRA---HFKSMLQDYGIEPCI 545

Query: 426 GN--SLISMYARSGRMEDARKAF-ESLFEKNLVSYNTMVDAYA--KNLNSEK 472
            +   ++ +  RSG+ ++A K   E  F+ +++ +  ++ A    KNL+  K
Sbjct: 546 EHYTCMVWLLGRSGQFDEAVKLIGEIPFQPSVMVWRALLGACVIHKNLDLGK 597



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 47/141 (33%), Positives = 76/141 (53%), Gaps = 3/141 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            L DG  +KA+     M      P   TYS +L++         G+ +HSL  ++    +
Sbjct: 385 QLGDG--EKALNLFSNMLGLDIQPTEVTYSSVLRASASLVALEPGRQIHSLTIKTMYNKD 442

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           SV+ NSLI +Y+KCG +++A   F  M +K+D VSW+++I  Y   G  ++A+++F  M 
Sbjct: 443 SVVANSLIDMYAKCGRIDDARLTFDKM-DKQDEVSWNALICGYSIHGLGMEALNLFDMMQ 501

Query: 173 ELGFCPNEYCFSAVIRACSNT 193
           +    PN+  F  V+ ACSN 
Sbjct: 502 QSNSKPNKLTFVGVLSACSNA 522


>gi|225439588|ref|XP_002265522.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Vitis vinifera]
          Length = 686

 Score =  541 bits (1393), Expect = e-151,   Method: Compositional matrix adjust.
 Identities = 268/643 (41%), Positives = 407/643 (63%), Gaps = 7/643 (1%)

Query: 222 LIDMFVKGSVDL-ESAYK--VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
           L++M ++ S D  ++ Y   +F ++ + N   W  MI       C  DAI  +  M   G
Sbjct: 48  LLNMILRCSFDFSDTNYTRFLFHQIKQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMRSEG 107

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           FLP+ FT   V+ AC+ L     G ++H+  ++ G   DV V  SLV +YAKC   G ++
Sbjct: 108 FLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVCLYAKC---GYLE 164

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           D+ KVFD + D NV+SWTAII+GY+  G + +EA+ +F  +++  +AP+ FT   VL AC
Sbjct: 165 DAHKVFDDIPDKNVVSWTAIISGYIGVG-KFREAIDMFRRLLEMNLAPDSFTIVRVLSAC 223

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
             L D N  E ++   ++ G   +  VG SL+ MYA+ G ME AR  F+ + EK++VS+ 
Sbjct: 224 TQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKCGNMEKARSVFDGMPEKDIVSWG 283

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  YA N   ++A +L  +++   V    YT   +LS  + +GA+  GE +   + ++
Sbjct: 284 AMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRN 343

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
            F  N  +  ALI +Y++C ++  A++VFK M++++ + W ++I+G A +G+   +  +F
Sbjct: 344 EFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLF 403

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
            ++   GIKP+G T+I +L  C+HAGL+ EG ++F SMY    +   +EHY CMVDLLGR
Sbjct: 404 GQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRFFSLTPSIEHYGCMVDLLGR 463

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           +G L EA + IR+MP+ A+ +VW   LGACR+H DT+L + A + ++E +P +   ++LL
Sbjct: 464 AGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELALKQLIELEPWNSGNYVLL 523

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SN+Y++   W+  A +R  M E+ + K  GCSWIE D  VH+F VG+  HP + +IYA+L
Sbjct: 524 SNIYSANLKWDEAAKVRLSMNEKRIQKPPGCSWIEVDGIVHEFLVGDKYHPLSEKIYAKL 583

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
           D+L  K+K  GY+P T+FVL ++EEE+K  +L  HSEK+A+AFGLIS + +  IRV KNL
Sbjct: 584 DELTKKMKVAGYVPTTDFVLFDIEEEEKEHFLGCHSEKLAIAFGLISATPTAVIRVVKNL 643

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RVCGDCH AIK IS +TGREI +RD+NRFH  ++G CSCNDYW
Sbjct: 644 RVCGDCHMAIKLISSITGREITVRDNNRFHCFREGSCSCNDYW 686



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 143/459 (31%), Positives = 238/459 (51%), Gaps = 15/459 (3%)

Query: 117 NSLISLYSKCG----DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           N L+++  +C     D N    +F  +  + +I  W++MI   V+     DAI  +  M 
Sbjct: 46  NYLLNMILRCSFDFSDTNYTRFLFHQI-KQPNIFLWNTMIRGLVSNDCFDDAIEFYGLMR 104

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             GF PN + F  V++AC+   ++ +G  I+  ++K G FD DV V  +L+ ++ K    
Sbjct: 105 SEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGG-FDCDVFVKTSLVCLYAKCGY- 162

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LE A+KVFD + +KN V WT +I+    +G  R+AI +F  ++     PD FT+  V+SA
Sbjct: 163 LEDAHKVFDDIPDKNVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSA 222

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++L    SG+ +H   +  G+  +V VG SLVDMYAKC   G+++ +R VFD M + ++
Sbjct: 223 CTQLGDLNSGEWIHKCIMEMGMVRNVFVGTSLVDMYAKC---GNMEKARSVFDGMPEKDI 279

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW A+I GY  + G  KEA+ LF  M +  V P+ +T   VL AC  L    + E V  
Sbjct: 280 VSWGAMIQGYALN-GLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSG 338

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
              +     +  +G +LI +YA+ G M  A + F+ + EK+ V +N ++   A N   + 
Sbjct: 339 LVDRNEFLYNPVLGTALIDLYAKCGSMSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKI 398

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNAL 530
           +F L  ++E  G+     TF  LL G +  G + +G +    + +  F     I  Y  +
Sbjct: 399 SFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYRF-FSLTPSIEHYGCM 457

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           + +  R   ++ A Q+ + M  + N I W +++     H
Sbjct: 458 VDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIH 496



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 228/434 (52%), Gaps = 18/434 (4%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           AI    LM  +G  P+  T+  +LK+C R  +  LG  +H+L+ +   + +  +  SL+ 
Sbjct: 96  AIEFYGLMRSEGFLPNNFTFPFVLKACARLLDLQLGVKIHTLVVKGGFDCDVFVKTSLVC 155

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           LY+KCG L +A+K+F  + +K ++VSW+++IS Y+  GK  +AI MF  +LE+   P+ +
Sbjct: 156 LYAKCGYLEDAHKVFDDIPDK-NVVSWTAIISGYIGVGKFREAIDMFRRLLEMNLAPDSF 214

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
               V+ AC+   ++  G  I+  +++ G    +V VG +L+DM+ K   ++E A  VFD
Sbjct: 215 TIVRVLSACTQLGDLNSGEWIHKCIMEMGMV-RNVFVGTSLVDMYAKCG-NMEKARSVFD 272

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            M EK+ V W  MI      G P++AI LFL M      PD +T+ GV+SAC+ L     
Sbjct: 273 GMPEKDIVSWGAMIQGYALNGLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALEL 332

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+ +     R     +  +G +L+D+YAKC   GS+  + +VF  M + + + W AII+G
Sbjct: 333 GEWVSGLVDRNEFLYNPVLGTALIDLYAKC---GSMSRAWEVFKGMKEKDRVVWNAIISG 389

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGR 419
              + G  K +  LF  + +  + P+  TF  +L  C    L+D     + Y +++ R  
Sbjct: 390 LAMN-GYVKISFGLFGQVEKLGIKPDGNTFIGLLCGCTHAGLVDEG---RRYFNSMYRFF 445

Query: 420 ALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA---YAKNLNSEKA 473
           +L   + +   ++ +  R+G +++A +   ++  E N + +  ++ A   +     +E A
Sbjct: 446 SLTPSIEHYGCMVDLLGRAGLLDEAHQLIRNMPMEANAIVWGALLGACRIHRDTQLAELA 505

Query: 474 FELLHEIEDTGVGT 487
            + L E+E    G 
Sbjct: 506 LKQLIELEPWNSGN 519



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 154/312 (49%), Gaps = 14/312 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G+ ++AI     + +    PD  T   +L +C +  + + G+ +H  +    +  N
Sbjct: 188 YIGVGKFREAIDMFRRLLEMNLAPDSFTIVRVLSACTQLGDLNSGEWIHKCIMEMGMVRN 247

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  SL+ +Y+KCG++ +A  +F  M  K DIVSW +MI  Y   G   +AI +F++M 
Sbjct: 248 VFVGTSLVDMYAKCGNMEKARSVFDGMPEK-DIVSWGAMIQGYALNGLPKEAIDLFLQMQ 306

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
                P+ Y    V+ AC+    + +G  + G + +  +  + V +G ALID++ K GS 
Sbjct: 307 RENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLYNPV-LGTALIDLYAKCGS- 364

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +  A++VF  M EK+ V W  +I+     G  + +  LF  +   G  PD  T  G++ 
Sbjct: 365 -MSRAWEVFKGMKEKDRVVWNAIISGLAMNGYVKISFGLFGQVEKLGIKPDGNTFIGLLC 423

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCV---GCSLVDMYAKCTVDGSVDDSRKVFDRM- 347
            C+   L   G++  +   R   +L   +   GC +VD+  +    G +D++ ++   M 
Sbjct: 424 GCTHAGLVDEGRRYFNSMYRF-FSLTPSIEHYGC-MVDLLGRA---GLLDEAHQLIRNMP 478

Query: 348 LDHNVMSWTAII 359
           ++ N + W A++
Sbjct: 479 MEANAIVWGALL 490



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 105/211 (49%), Gaps = 10/211 (4%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G  ++AI     M ++   PD  T   +L +C R     LG+ V  L+ R++   
Sbjct: 289 YALN-GLPKEAIDLFLQMQRENVKPDCYTVVGVLSACARLGALELGEWVSGLVDRNEFLY 347

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N V+  +LI LY+KCG ++ A ++FK M  ++D V W+++IS     G    +  +F ++
Sbjct: 348 NPVLGTALIDLYAKCGSMSRAWEVFKGM-KEKDRVVWNAIISGLAMNGYVKISFGLFGQV 406

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV---GCALIDMFVK 228
            +LG  P+   F  ++  C++   V  G   +  + +  +F     +   GC ++D+  +
Sbjct: 407 EKLGIKPDGNTFIGLLCGCTHAGLVDEGRRYFNSMYR--FFSLTPSIEHYGC-MVDLLGR 463

Query: 229 GSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
             + L+ A+++   M  E N + W  ++  C
Sbjct: 464 AGL-LDEAHQLIRNMPMEANAIVWGALLGAC 493


>gi|297798624|ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313032|gb|EFH43455.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 997

 Score =  540 bits (1392), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 307/822 (37%), Positives = 484/822 (58%), Gaps = 34/822 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI----RSRNFHLGKLVHSLLTRSK 108
           +L  G+V++     + M  +    D+  ++L+LK+ +    +     L    H+    S 
Sbjct: 197 YLKFGKVKEGRVLFEEMPYR----DVVLWNLMLKAYLEMGFKEEAIDLSSAFHT----SG 248

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD------IVSWSSMISSYVNRGKQV 162
           L PN + L  L+S  S  GD +EA ++ KS  N  D      I+S + ++S Y++ G+  
Sbjct: 249 LHPNEITLR-LLSRIS--GDDSEAGQV-KSFENGNDASAVSEIISRNKILSGYLHAGQYS 304

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
             +  F++M+E     ++  F  V+      +++A+G  ++   LK G  D  + V  +L
Sbjct: 305 ALLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLG-LDLMLTVSNSL 363

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           I+M+ K    +  A  VF+ M+E++ + W  +I    Q     +A+ LF+ ++  G  PD
Sbjct: 364 INMYCKLR-KIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPD 422

Query: 283 RFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK--CTVDGSVDD 339
            +T++ V+ A S L E  +  KQ+H  AI+T    D  V  +L+D Y++  C  +  V  
Sbjct: 423 HYTMTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLF 482

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            R  FD      +++W A+++GY QS    K  ++LF+ M +     + FT A+VLK CG
Sbjct: 483 GRNNFD------LVAWNAMMSGYTQSHDGHK-TLELFALMHKQGERSDDFTLATVLKTCG 535

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L   N  +QV+ +A+K G  LD  V + ++ MY + G M  A+ AF+S+   + V++ T
Sbjct: 536 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 595

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           ++    +N   E+A  +  ++   GV    +T A+L   +S + A+ +G QIHA  +K  
Sbjct: 596 LISGCIENGEEERALHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 655

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             S+  +  +L+ MY++C +++ A+ +FK +E  N+ +W +M+ G A+HG    AL++F 
Sbjct: 656 CTSDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKEALQLFK 715

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M + GIKP+ +T+I VLSACSH+GL+SE +K+ RSM+ ++GI   +EHY+C+ D LGR+
Sbjct: 716 QMESLGIKPDKVTFIGVLSACSHSGLVSEAYKYIRSMHRDYGIKPEIEHYSCLADALGRA 775

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G + EA   I SM + A   ++RT L ACRV GDTE GK  A  +LE +P D +A++LLS
Sbjct: 776 GLVKEAENLIDSMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 835

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA+A  W+ +   R  MK   + K+ G SWIE  NK+H F V + S+P+T  IY ++ 
Sbjct: 836 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHLFVVDDRSNPQTELIYKKVK 895

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
            +   IK+ GY+P+T+F L ++EEE+K + L+ HSEK+AVAFGL+ST  S PIRV KNLR
Sbjct: 896 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 955

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VCGDCH A+KYIS V  REIVLRD+NRFH  KDG CSC DYW
Sbjct: 956 VCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 153/609 (25%), Positives = 284/609 (46%), Gaps = 62/609 (10%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
            L+  I + +  LGK  H+ +   +  P   ++N+LIS+YSKCG L  A ++F  M  +R
Sbjct: 52  FLRDAISTSDLMLGKCTHARILALEENPERFLVNNLISMYSKCGSLTYARRVFDKM-PER 110

Query: 144 DIVSWSSMISSYVNRGKQV-----DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           D+VSW+S++++Y    + V     +A  +F  + +     +    S +++ C ++  V  
Sbjct: 111 DLVSWNSILAAYAQSSEGVVENVKEAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVCA 170

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
               +G+  K G  D D  V  AL+++++K G V  +    +F++M  ++ V W LM+  
Sbjct: 171 SESFHGYACKIG-LDGDDFVAGALVNIYLKFGKV--KEGRVLFEEMPYRDVVLWNLMLKA 227

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTL------SGVVSACSELELFTSGKQLHSWAIR 311
             ++G   +AI L      SG  P+  TL      SG  S   +++ F +G         
Sbjct: 228 YLEMGFKEEAIDLSSAFHTSGLHPNEITLRLLSRISGDDSEAGQVKSFENG--------- 278

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
                                     +D+  V        ++S   I++GY+ + G+   
Sbjct: 279 --------------------------NDASAV------SEIISRNKILSGYLHA-GQYSA 305

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            +K F DM++  +  +  TF  VL     L    + +QV+  A+K G  L   V NSLI+
Sbjct: 306 LLKCFMDMVESDLECDQVTFILVLATAVRLDSLALGQQVHCMALKLGLDLMLTVSNSLIN 365

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY +  ++  AR  F ++ E++L+S+N+++   A++    +A  L  ++   G+    YT
Sbjct: 366 MYCKLRKIGLARTVFNNMSERDLISWNSVIAGIAQSDLEVEAVCLFMQLLRCGLKPDHYT 425

Query: 492 FASLLSGASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
             S+L  ASS+   +   +QIH   IK+   ++  +  ALI  YSR   ++ A  +F   
Sbjct: 426 MTSVLKAASSLPEGLSLSKQIHVHAIKTNNVADSFVSTALIDAYSRNRCMKEAEVLFGR- 484

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
            + ++++W +M++G+ +     + LE+F  M   G + +  T   VL  C     I++G 
Sbjct: 485 NNFDLVAWNAMMSGYTQSHDGHKTLELFALMHKQGERSDDFTLATVLKTCGFLFAINQG- 543

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
           K   +   + G    +   + ++D+  + G ++ A     S+P+  DV  W T +  C  
Sbjct: 544 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTLISGCIE 602

Query: 671 HGDTELGKH 679
           +G+ E   H
Sbjct: 603 NGEEERALH 611


>gi|242092564|ref|XP_002436772.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
 gi|241914995|gb|EER88139.1| hypothetical protein SORBIDRAFT_10g008520 [Sorghum bicolor]
          Length = 825

 Score =  540 bits (1391), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 304/845 (35%), Positives = 487/845 (57%), Gaps = 28/845 (3%)

Query: 23  PSR-QNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTY 81
           PSR + L P+ S P +  P      +N  +  L+D     A+            P LD+Y
Sbjct: 3   PSRCRRLLPTFSQPNV--PLRRNLAANAALQWLDDELASLAL------------PKLDSY 48

Query: 82  SL--LLKSCIRSRNFHLGKLVHSLLTRSK--LEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +   LL+ CI   +   G+ VH+ + +     + ++   N L++LY+K G L  A ++F 
Sbjct: 49  ACARLLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNLYAKLGPLAAARRLFD 108

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M  +R++VS+ +++  Y  RG   +A  +F  +   G   N +  + +++     +   
Sbjct: 109 GMP-ERNMVSFVTLVQGYALRGGFEEAAGLFRRLQREGHEVNHFVLTTILKVLVAMDAPG 167

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
           +   I+    K G+ D +  VG +LID + + G+V    A  VFD +  K+ V WT M++
Sbjct: 168 LTCCIHACACKLGH-DRNAFVGSSLIDAYSLCGAV--SHARCVFDGIIWKDAVTWTAMVS 224

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
             ++   P DA+  F  M ++G  P+ F L+ V+ A   L     GK +H  A++T    
Sbjct: 225 CYSENDIPEDALNTFSKMRMAGAKPNPFVLTSVLKAAVCLSSAVLGKGIHGCAVKTLCDT 284

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           +  VG +L+DMYAKC   G ++D+R VF+ +   +V+ W+ +I+ Y QS  ++++A ++F
Sbjct: 285 EPHVGGALLDMYAKC---GYIEDARTVFEIIPHDDVILWSFLISRYAQSY-QNEQAFEMF 340

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M++  V PN F+ + VL+AC N+   ++ +Q++   +K G   +  VGN+L+ +YA+ 
Sbjct: 341 LRMMRSSVVPNEFSLSGVLQACANVAFLDLGQQIHNLVIKLGYESELFVGNALMDVYAKC 400

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
             ME++ + F SL + N VS+NT++  Y ++  +E A  +  E+    V ++  TF+S+L
Sbjct: 401 RNMENSLEIFRSLRDANEVSWNTIIVGYCQSGFAEDALSVFQEMRAAHVLSTQVTFSSVL 460

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              ++  +I    QIH+ I KS F ++  + N+LI  Y++C  +  A +VF+ +   +V+
Sbjct: 461 RACANTASIKHTVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGCIRDALKVFESIIQCDVV 520

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW ++I+G+A HG A  ALE+F +M     KPN +T++A+LS C   GL+++G   F SM
Sbjct: 521 SWNAIISGYALHGRATDALELFNRMNKSDTKPNDVTFVALLSVCGSTGLVNQGLSLFNSM 580

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +H I   M+HY C+V LLGR+G L +AL+FI  +P +   +VWR  L +C VH +  L
Sbjct: 581 TMDHRIKPSMDHYTCIVRLLGRAGRLNDALKFIGDIPSTPSPMVWRALLSSCVVHKNVAL 640

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
           GK +AE +LE +PQD   ++LLSN+YA+AG  + VA +RK M+   + KE G SW+E   
Sbjct: 641 GKFSAEKVLEIEPQDETTYVLLSNMYAAAGILDQVALLRKSMRNIGVKKEVGLSWVEIKG 700

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           +VH F VG   HP    I A L+ L LK    GY+PD N VLH+++EE+K + L+ HSE+
Sbjct: 701 EVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARMLWVHSER 760

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +A+A+GL  T    PIR+ KNLR C DCHT  K IS +  REIV+RD NRFHH  +G CS
Sbjct: 761 LALAYGLSMTPPGHPIRIMKNLRSCLDCHTVFKVISKIVQREIVVRDINRFHHFDEGICS 820

Query: 857 CNDYW 861
           C DYW
Sbjct: 821 CGDYW 825


>gi|147789959|emb|CAN73858.1| hypothetical protein VITISV_024322 [Vitis vinifera]
          Length = 1539

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 306/795 (38%), Positives = 474/795 (59%), Gaps = 15/795 (1%)

Query: 76   PDLDTYSLLLKSCIRSRNFHLGKLVHSL--LTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
            P+  T+  L+ +   S +F L  L   L  + +S    +  + ++L+S +++ G  ++A 
Sbjct: 751  PNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSGFARFGLTDDAK 810

Query: 134  KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYC--FSAVIRAC 190
             IF+ MG  R++VS + ++   V + +   A  +F EM +L G   + Y    SA     
Sbjct: 811  NIFEQMG-VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFS 869

Query: 191  SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
               E    G  ++  +++ G  D+ V +G  L++M+ K    +  A  VF+ M EK++V 
Sbjct: 870  VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGA-IADACSVFELMVEKDSVS 928

Query: 251  WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
            W  +I+   Q  C  DA   FL M  +G +P  FTL   +S+C+ L     G+Q+H   +
Sbjct: 929  WNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL 988

Query: 311  RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
            + GL  DV V  +L+ +YA+    G   +  KVF  M +++ +SW ++I     S     
Sbjct: 989  KLGLDTDVSVSNALLALYAET---GCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVS 1045

Query: 371  EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
            +AVK F +M++G    +  TF ++L A  +L    V+ Q++   +K   + D  +GN+L+
Sbjct: 1046 QAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALL 1105

Query: 431  SMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
            S Y + G M +  K F  + E ++ VS+N+M+  Y  N    KA +L+  +   G    +
Sbjct: 1106 SCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDS 1165

Query: 490  YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            +TFA++LS  +S+  + +G ++HA  I++  ES+  + +AL+ MYS+C  ++ A + F+ 
Sbjct: 1166 FTFATVLSACASVATLERGMEVHACGIRACMESDVVVGSALVDMYSKCGRIDYASRFFEL 1225

Query: 550  MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT-YIAVLSACSHAGLISE 608
            M  RNV SW SMI+G+A+HG   +AL++F +M+ DG  P+ +   + VLSACSH G + E
Sbjct: 1226 MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVAPLLGVLSACSHVGFVEE 1285

Query: 609  GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
            G++HF+SM + + +  R+EH++CMVDLLGR+G L E  +FI SMP+  +VL+WRT LGAC
Sbjct: 1286 GFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGAC 1345

Query: 669  -RVHG-DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
             R +G +TELG+ AAEM+LE +PQ+   ++LL+N+YAS   WE VA  R  MKE  + KE
Sbjct: 1346 CRANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARXAMKEAAVKKE 1405

Query: 727  AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
            AGCSW+   + VH F  G+  HP+   IY +L +L  K+++ GY+P T + L +LE E K
Sbjct: 1406 AGCSWVTMKDGVHVFVAGDKLHPEKDXIYDKLRELNRKMRDAGYIPQTKYALFDLELENK 1465

Query: 787  VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
             + L  HSEKIAVAF L   S + PIR+ KNLRVCGDCH+A  YIS + GR+IVLRDSNR
Sbjct: 1466 EELLSYHSEKIAVAFVLTRQS-ALPIRIMKNLRVCGDCHSAFGYISKIVGRQIVLRDSNR 1524

Query: 847  FHHIKDGKCSCNDYW 861
            FHH +DGKCSC DYW
Sbjct: 1525 FHHFEDGKCSCGDYW 1539



 Score =  245 bits (626), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 190/667 (28%), Positives = 335/667 (50%), Gaps = 37/667 (5%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRS--RNFHLGKLVHSLLTRSKLE 110
            +  +G+  +A      M + G  P+   +   L++C  S      LG  +H L+++++  
Sbjct: 620  YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 679

Query: 111  PNSVILNSLISLYSKCGD-LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             + V+ N LIS+Y  C D  N+A  +F  +G  R+ +SW+S+IS Y  RG  V A  +F 
Sbjct: 680  SDVVVCNVLISMYGSCLDSANDARSVFDRIG-IRNSISWNSIISVYSRRGDXVSAYDLFS 738

Query: 170  EM----LELGFCPNEYCFSAVIR-ACSNTE-NVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
             M    L   F PNEY F ++I  ACS+ +  + +   +   + K G+   D+ VG AL+
Sbjct: 739  SMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFL-QDLYVGSALV 797

Query: 224  DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPD 282
              F +  +  + A  +F++M  +N V    ++    +      A ++F +M  L G   D
Sbjct: 798  SGFARFGL-TDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD 856

Query: 283  RFTLSGVVSACSELELFTS----GKQLHSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSV 337
             + +  ++SA SE  +       G+++H+  IRTGL  + V +G  LV+MYAK    G++
Sbjct: 857  SYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK---SGAI 911

Query: 338  DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
             D+  VF+ M++ + +SW ++I+G  Q+   + +A + F  M +    P++FT  S L +
Sbjct: 912  ADACSVFELMVEKDSVSWNSLISGLDQNECSE-DAAESFLRMRRTGSMPSNFTLISTLSS 970

Query: 398  CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
            C +L    + EQ++   +K G   D  V N+L+++YA +G   +  K F  + E + VS+
Sbjct: 971  CASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSW 1030

Query: 458  NTMVDAYAKNLNS-EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
            N+++ A + +  S  +A +   E+   G G S  TF ++LS  SS+       QIHA ++
Sbjct: 1031 NSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVL 1090

Query: 517  KSGFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARAL 575
            K     +  I NAL+S Y +C  +    ++F  M E R+ +SW SMI+G+  +    +A+
Sbjct: 1091 KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAM 1150

Query: 576  EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK----HFRSMYDEHGIVQRMEHYAC 631
            ++ + M+  G + +  T+  VLSAC+    +  G +      R+  +   +V      + 
Sbjct: 1151 DLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESDVVVG-----SA 1205

Query: 632  MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG-KHAAEMILEQDPQ 690
            +VD+  + G +  A  F   MPL  +V  W + +     HG  E   K    M+L+  P 
Sbjct: 1206 LVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 1264

Query: 691  DPAAHIL 697
            D  A +L
Sbjct: 1265 DHVAPLL 1271



 Score =  227 bits (578), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 168/591 (28%), Positives = 297/591 (50%), Gaps = 32/591 (5%)

Query: 91   SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
            +R  HL  + +  +       N  + N+LI++Y + GDL  A K+F  M N R++V+W+ 
Sbjct: 563  ARELHLQSIKYGFVG------NLFLSNTLINIYVRIGDLGSAQKLFDEMSN-RNLVTWAC 615

Query: 151  MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC--SNTENVAIGHIIYGFLLK 208
            +IS Y   GK  +A   F +M+  GF PN Y F + +RAC  S      +G  I+G + K
Sbjct: 616  LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 675

Query: 209  CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
              Y  SDV V   LI M+         A  VFD++  +N++ W  +I+  ++ G    A 
Sbjct: 676  TRY-GSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYSRRGDXVSAY 734

Query: 269  RLFLDMILSG----FLPDRFTLSGVVS-ACSELEL-FTSGKQLHSWAIRTGLALDVCVGC 322
             LF  M   G    F P+ +T   +++ ACS ++      +Q+ +   ++G   D+ VG 
Sbjct: 735  DLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGS 794

Query: 323  SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
            +LV  +A+    G  DD++ +F++M   NV+S   ++ G V+   + + A K+F +M + 
Sbjct: 795  ALVSGFARF---GLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQ-KQGEAAAKVFHEM-KD 849

Query: 383  QVAPNHFTFASVLKACG--NLLDSN--VAEQVYTHAVKRGRALDD---CVGNSLISMYAR 435
             V  N  ++  +L A    ++L+       +V+ H ++ G  L+D    +GN L++MYA+
Sbjct: 850  LVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG--LNDNKVAIGNGLVNMYAK 907

Query: 436  SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            SG + DA   FE + EK+ VS+N+++    +N  SE A E    +  TG   S +T  S 
Sbjct: 908  SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLIST 967

Query: 496  LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
            LS  +S+G I  GEQIH   +K G +++  + NAL+++Y+         +VF  M + + 
Sbjct: 968  LSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQ 1027

Query: 556  ISWTSMITGFA-KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
            +SW S+I   +      ++A++ F +M+  G   + +T+I +LSA S   L  E      
Sbjct: 1028 VSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIH 1086

Query: 615  SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
            ++  ++ +         ++   G+ G + E  +    M  + D + W + +
Sbjct: 1087 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMI 1137



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 151/481 (31%), Positives = 247/481 (51%), Gaps = 29/481 (6%)

Query: 201  IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            I YGF+        ++ +   LI+++V+   DL SA K+FD+M+ +N V W  +I+  TQ
Sbjct: 571  IKYGFV-------GNLFLSNTLINIYVRIG-DLGSAQKLFDEMSNRNLVTWACLISGYTQ 622

Query: 261  LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLALDV 318
             G P +A   F DM+ +GF+P+ +     + AC E        G Q+H    +T    DV
Sbjct: 623  NGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYGSDV 682

Query: 319  CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
             V   L+ MY  C    S +D+R VFDR+   N +SW +II+ Y + G     A  LFS 
Sbjct: 683  VVCNVLISMYGSCL--DSANDARSVFDRIGIRNSISWNSIISVYSRRGDX-VSAYDLFSS 739

Query: 379  MIQGQVA----PNHFTFASVLKACGNLLDSN--VAEQVYTHAVKRGRALDDCVGNSLISM 432
            M +  +     PN +TF S++ A  + +D    V EQ+     K G   D  VG++L+S 
Sbjct: 740  MQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSGFLQDLYVGSALVSG 799

Query: 433  YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
            +AR G  +DA+  FE +  +N+VS N ++    K    E A ++ HE++D  VG ++ ++
Sbjct: 800  FARFGLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDL-VGINSDSY 858

Query: 493  ASLLSGASSIGAIG----KGEQIHARIIKSGFESNH-CIYNALISMYSRCANVEAAFQVF 547
              LLS  S    +     KG ++HA +I++G   N   I N L++MY++   +  A  VF
Sbjct: 859  VVLLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGAIADACSVF 918

Query: 548  KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
            + M +++ +SW S+I+G  ++  +  A E F +M   G  P+  T I+ LS+C+  G I 
Sbjct: 919  ELMVEKDSVSWNSLISGLDQNECSEDAAESFLRMRRTGSMPSNFTLISTLSSCASLGWIM 978

Query: 608  EGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             G + H   +  + G+   +     ++ L   +G  TE L+    MP   D + W + +G
Sbjct: 979  LGEQIHCDGL--KLGLDTDVSVSNALLALYAETGCFTECLKVFSLMP-EYDQVSWNSVIG 1035

Query: 667  A 667
            A
Sbjct: 1036 A 1036



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 214/426 (50%), Gaps = 23/426 (5%)

Query: 69   MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
            M + G+ P   T    L SC       LG+ +H    +  L+ +  + N+L++LY++ G 
Sbjct: 952  MRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGC 1011

Query: 129  LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV-DAIHMFVEMLELGFCPNEYCFSAVI 187
              E  K+F S+  + D VSW+S+I +  +    V  A+  F+EM+  G+  +   F  ++
Sbjct: 1012 FTECLKVF-SLMPEYDQVSWNSVIGALSDSEASVSQAVKYFLEMMRGGWGLSRVTFINIL 1070

Query: 188  RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-K 246
             A S+     + H I+  +LK    D D  +G AL+  + K   ++    K+F +M+E +
Sbjct: 1071 SAVSSLSLHEVSHQIHALVLKYCLSD-DTAIGNALLSCYGKCG-EMNECEKIFARMSETR 1128

Query: 247  NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
            + V W  MI+          A+ L   M+  G   D FT + V+SAC+ +     G ++H
Sbjct: 1129 DEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVH 1188

Query: 307  SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            +  IR  +  DV VG +LVDMY+KC   G +D + + F+ M   NV SW ++I+GY + G
Sbjct: 1189 ACGIRACMESDVVVGSALVDMYSKC---GRIDYASRFFELMPLRNVYSWNSMISGYARHG 1245

Query: 367  GRDKEAVKLFSDMIQGQVAPNHFT-FASVLKACGNLLDSNVAEQVYTH--AVKRGRALDD 423
              +K A+KLF+ M+     P+H      VL AC ++      E+ + H  ++     L  
Sbjct: 1246 HGEK-ALKLFTRMMLDGQPPDHVAPLLGVLSACSHV---GFVEEGFEHFKSMSEVYRLSP 1301

Query: 424  CVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLNSE---KAFE 475
             V   + ++ +  R+G++++      S+  + N++ + T++ A   A   N+E   +A E
Sbjct: 1302 RVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACCRANGRNTELGRRAAE 1361

Query: 476  LLHEIE 481
            +L E+E
Sbjct: 1362 MLLELE 1367



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/271 (26%), Positives = 128/271 (47%), Gaps = 8/271 (2%)

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           TF S++        S  A +++  ++K G   +  + N+LI++Y R G +  A+K F+ +
Sbjct: 546 TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 605

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG--K 507
             +NLV++  ++  Y +N   ++A     ++   G   + Y F S L      G  G   
Sbjct: 606 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 665

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCAN-VEAAFQVFKEMEDRNVISWTSMITGFA 566
           G QIH  I K+ + S+  + N LISMY  C +    A  VF  +  RN ISW S+I+ ++
Sbjct: 666 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDRIGIRNSISWNSIISVYS 725

Query: 567 KHGFAARALEIFYKMLADGI----KPNGITYIAVLS-ACSHAGLISEGWKHFRSMYDEHG 621
           + G    A ++F  M  +G+    KPN  T+ ++++ ACS         +   +  ++ G
Sbjct: 726 RRGDXVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITAACSSVDFGLCVLEQMLARVEKSG 785

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            +Q +   + +V    R G   +A      M
Sbjct: 786 FLQDLYVGSALVSGFARFGLTDDAKNIFEQM 816



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 82/154 (53%), Gaps = 7/154 (4%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            ++++  + KA+  +  M QKG   D  T++ +L +C        G  VH+   R+ +E +
Sbjct: 1140 YIHNELLHKAMDLVWFMMQKGQRLDSFTFATVLSACASVATLERGMEVHACGIRACMESD 1199

Query: 113  SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             V+ ++L+ +YSKCG ++ A++ F+ M   R++ SW+SMIS Y   G    A+ +F  M+
Sbjct: 1200 VVVGSALVDMYSKCGRIDYASRFFELMP-LRNVYSWNSMISGYARHGHGEKALKLFTRMM 1258

Query: 173  ELGFCPNEYC-FSAVIRACSNTENVAIGHIIYGF 205
              G  P+       V+ ACS+     +G +  GF
Sbjct: 1259 LDGQPPDHVAPLLGVLSACSH-----VGFVEEGF 1287



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 68/123 (55%)

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           +T + +S+ TF SL++         +  ++H + IK GF  N  + N LI++Y R  ++ 
Sbjct: 537 NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 596

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           +A ++F EM +RN+++W  +I+G+ ++G    A   F  M+  G  PN   + + L AC 
Sbjct: 597 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 656

Query: 602 HAG 604
            +G
Sbjct: 657 ESG 659


>gi|356515320|ref|XP_003526349.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 816

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 281/787 (35%), Positives = 456/787 (57%), Gaps = 15/787 (1%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           HP     ++LL+ C   +  H    +  L+ ++      +    LISL+ K   + EA +
Sbjct: 45  HPS----AILLELCTSLKELHQ---ILPLIIKNGFYNEHLFQTKLISLFCKFNSITEAAR 97

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F+ + +K D++ + +M+  Y       DA+  +  M      P  Y F+ +++      
Sbjct: 98  VFEPVEHKLDVL-YHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENL 156

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G  I+G ++  G F S++    A+++++ K    +E AYK+F++M +++ V W  +
Sbjct: 157 DLRRGREIHGMVITNG-FQSNLFAMTAVVNLYAKCR-QIEDAYKMFERMPQRDLVSWNTV 214

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +    Q G  R A+++ L M  +G  PD  TL  V+ A ++L+    G+ +H +A R G 
Sbjct: 215 VAGYAQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAGF 274

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
              V V  +++D Y KC   GSV  +R VF  M   NV+SW  +I GY Q+G   +EA  
Sbjct: 275 EYMVNVATAMLDTYFKC---GSVRSARLVFKGMSSRNVVSWNTMIDGYAQNG-ESEEAFA 330

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            F  M+   V P + +    L AC NL D      V+    ++    D  V NSLISMY+
Sbjct: 331 TFLKMLDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYS 390

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           +  R++ A   F +L  K +V++N M+  YA+N    +A  L  E++   +   ++T  S
Sbjct: 391 KCKRVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVNEALNLFCEMQSHDIKPDSFTLVS 450

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +++  + +    + + IH   I++  + N  +  ALI  +++C  ++ A ++F  M++R+
Sbjct: 451 VITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERH 510

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           VI+W +MI G+  +G    AL++F +M    +KPN IT+++V++ACSH+GL+ EG  +F 
Sbjct: 511 VITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFE 570

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM + +G+   M+HY  MVDLLGR+G L +A +FI+ MP+   + V    LGACR+H + 
Sbjct: 571 SMKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDMPVKPGITVLGAMLGACRIHKNV 630

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           ELG+  A+ + + DP D   H+LL+N+YASA  W+ VA +R  M+++ + K  GCS +E 
Sbjct: 631 ELGEKTADELFDLDPDDGGYHVLLANMYASASMWDKVARVRTAMEKKGIQKTPGCSLVEL 690

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
            N+VH F+ G T+HP++  IYA L+ L  ++K  GY+PDTN + H++EE+ K Q L  HS
Sbjct: 691 RNEVHTFYSGSTNHPQSKRIYAYLETLGDEMKAAGYVPDTNSI-HDVEEDVKEQLLSSHS 749

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           E++A+AFGL++T     I + KNLRVCGDCH A KYIS+VTGREI++RD  RFHH K+G 
Sbjct: 750 ERLAIAFGLLNTRHGTAIHIRKNLRVCGDCHEATKYISLVTGREIIVRDLRRFHHFKNGI 809

Query: 855 CSCNDYW 861
           CSC DYW
Sbjct: 810 CSCGDYW 816



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 140/517 (27%), Positives = 268/517 (51%), Gaps = 18/517 (3%)

Query: 44  EPLSNRL--IYHL------NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           EP+ ++L  +YH        +  ++ A+   + M      P +  ++ LL+    + +  
Sbjct: 100 EPVEHKLDVLYHTMLKGYAKNSTLRDAVRFYERMRCDEVMPVVYDFTYLLQLSGENLDLR 159

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            G+ +H ++  +  + N   + ++++LY+KC  + +A K+F+ M  +RD+VSW+++++ Y
Sbjct: 160 RGREIHGMVITNGFQSNLFAMTAVVNLYAKCRQIEDAYKMFERMP-QRDLVSWNTVVAGY 218

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              G    A+ + ++M E G  P+     +V+ A ++ + + IG  I+G+  + G F+  
Sbjct: 219 AQNGFARRAVQVVLQMQEAGQKPDSITLVSVLPAVADLKALRIGRSIHGYAFRAG-FEYM 277

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V V  A++D + K GSV   SA  VF  M+ +N V W  MI    Q G   +A   FL M
Sbjct: 278 VNVATAMLDTYFKCGSV--RSARLVFKGMSSRNVVSWNTMIDGYAQNGESEEAFATFLKM 335

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +  G  P   ++ G + AC+ L     G+ +H       +  DV V  SL+ MY+KC   
Sbjct: 336 LDEGVEPTNVSMMGALHACANLGDLERGRYVHRLLDEKKIGFDVSVMNSLISMYSKCK-- 393

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
             VD +  VF  +    V++W A+I GY Q+G  + EA+ LF +M    + P+ FT  SV
Sbjct: 394 -RVDIAASVFGNLKHKTVVTWNAMILGYAQNGCVN-EALNLFCEMQSHDIKPDSFTLVSV 451

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           + A  +L  +  A+ ++  A++     +  V  +LI  +A+ G ++ ARK F+ + E+++
Sbjct: 452 ITALADLSVTRQAKWIHGLAIRTLMDKNVFVCTALIDTHAKCGAIQTARKLFDLMQERHV 511

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +++N M+D Y  N +  +A +L +E+++  V  +  TF S+++  S  G + +G      
Sbjct: 512 ITWNAMIDGYGTNGHGREALDLFNEMQNGSVKPNEITFLSVIAACSHSGLVEEGMYYFES 571

Query: 515 IIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           + ++ G E     Y A++ +  R   ++ A++  ++M
Sbjct: 572 MKENYGLEPTMDHYGAMVDLLGRAGRLDDAWKFIQDM 608


>gi|6706414|emb|CAB66100.1| putative protein [Arabidopsis thaliana]
          Length = 803

 Score =  540 bits (1390), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 291/811 (35%), Positives = 481/811 (59%), Gaps = 26/811 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNSLISLYSKCG 127
           M   G  PD   +  LLK+    ++  LGK +H+ + +     +SV + N+L++LY KCG
Sbjct: 1   MIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFGYGVDSVTVANTLVNLYRKCG 60

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           D     K+F  + ++R+ VSW+S+ISS  +  K   A+  F  ML+    P+ +   +V+
Sbjct: 61  DFGAVYKVFDRI-SERNQVSWNSLISSLCSFEKWEMALEAFRCMLDENVEPSSFTLVSVV 119

Query: 188 RACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            ACSN    E + +G  ++ + L+ G  +S +     L+ M+ K    L S+  +     
Sbjct: 120 TACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVAMYGKLG-KLASSKVLLGSFG 176

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++ V W  +++   Q     +A+    +M+L G  PD FT+S V+ ACS LE+  +GK+
Sbjct: 177 GRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEFTISSVLPACSHLEMLRTGKE 236

Query: 305 LHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           LH++A++ G L  +  VG +LVDMY  C     V   R+VFD M D  +  W A+I GY 
Sbjct: 237 LHAYALKNGSLDENSFVGSALVDMYCNCK---QVLSGRRVFDGMFDRKIGLWNAMIAGYS 293

Query: 364 QSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           Q+   DKEA+ LF  M +   +  N  T A V+ AC      +  E ++   VKRG   D
Sbjct: 294 QNE-HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSGAFSRKEAIHGFVVKRGLDRD 352

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V N+L+ MY+R G+++ A + F  + +++LV++NTM+  Y  + + E A  LLH++++
Sbjct: 353 RFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMITGYVFSEHHEDALLLLHKMQN 412

Query: 483 -----------TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
                        +  ++ T  ++L   +++ A+ KG++IHA  IK+   ++  + +AL+
Sbjct: 413 LERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEIHAYAIKNNLATDVAVGSALV 472

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C  ++ + +VF ++  +NVI+W  +I  +  HG    A+++   M+  G+KPN +
Sbjct: 473 DMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNGQEAIDLLRMMMVQGVKPNEV 532

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+I+V +ACSH+G++ EG + F  M  ++G+    +HYAC+VDLLGR+G + EA + +  
Sbjct: 533 TFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYACVVDLLGRAGRIKEAYQLMNM 592

Query: 652 MPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           MP   +    W + LGA R+H + E+G+ AA+ +++ +P   + ++LL+N+Y+SAG W+ 
Sbjct: 593 MPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPNVASHYVLLANIYSSAGLWDK 652

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
              +R+ MKE+ + KE GCSWIE  ++VHKF  G++SHP++ ++   L+ L  ++++ GY
Sbjct: 653 ATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQSEKLSGYLETLWERMRKEGY 712

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +PDT+ VLH +EE++K   L  HSEK+A+AFG+++TS    IRV KNLRVC DCH A K+
Sbjct: 713 VPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGTIIRVAKNLRVCNDCHLATKF 772

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS +  REI+LRD  RFH  K+G CSC DYW
Sbjct: 773 ISKIVDREIILRDVRRFHRFKNGTCSCGDYW 803


>gi|413918610|gb|AFW58542.1| hypothetical protein ZEAMMB73_242801 [Zea mays]
          Length = 941

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 285/793 (35%), Positives = 465/793 (58%), Gaps = 14/793 (1%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G+ PD  T + +LK+C    +   G  VH L  +  L+ ++++ N+LI +Y+KCG L+ A
Sbjct: 159 GSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAKCGLLDSA 218

Query: 133 NKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
            ++F+ +  + RD+ SW+S++S  V  G+ ++A+ +F  M   GF  N Y   AV++ C+
Sbjct: 219 LRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSVAVLQVCA 278

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGC-ALIDMFVK-GSVDLESAYKVFDKMTEKNTV 249
               +++G  ++  LLKCG   S++ + C AL+ M+ K G VD  SA +VF ++ EK+ +
Sbjct: 279 ELGLLSLGRELHAALLKCG---SELNIQCNALLVMYAKYGRVD--SALRVFGQIAEKDYI 333

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  M++   Q     +AI  F +M+  GF PD   +  + SA   L    +G++ H++A
Sbjct: 334 SWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNGREFHAYA 393

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I+  L  D+ VG +L+DMY KC   GS++ S KVF+ M   + +SWT I+  + QS  R 
Sbjct: 394 IKQRLHTDLQVGNTLMDMYIKC---GSIECSAKVFESMGIRDHISWTTILACFAQSS-RH 449

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
            EA+++  ++ +  +  +     S+L+ C  L   ++ +QV+ +A++ G  LD  + N L
Sbjct: 450 SEALEMILELQKEGIMVDSMMIGSILETCCGLKSISLLKQVHCYAIRNG-LLDLILENRL 508

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I +Y   G  + +   F+ + +K++VS+ +M++    N     A  L  E++   +   +
Sbjct: 509 IDIYGECGEFDHSLNLFQRVEKKDIVSWTSMINCCTNNGRLNGAVFLFTEMQKANIQPDS 568

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
               S+L   + + ++ KG+Q+H  +I+  F     + ++L+ MYS C ++  A +VF+ 
Sbjct: 569 VALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGPVVSSLVDMYSGCGSMNYAIRVFER 628

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
            + ++V+ WT+MI     HG   +A+++F +ML  G+ P+ ++++A+L ACSH+ L+ EG
Sbjct: 629 AKCKDVVLWTAMINATGMHGHGKQAIDLFKRMLQTGLTPDHVSFLALLYACSHSKLVEEG 688

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
             +   M  ++ +    EHYAC+VD+LGRSG   EA EFI++MP+     VW   LGACR
Sbjct: 689 KHYLDIMVSKYRLKPWQEHYACVVDILGRSGQTEEAYEFIKTMPMDPKSAVWCALLGACR 748

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
           VH +  L   AA  +LE +P +P  +IL+SN++A  G W      R RM ER L K   C
Sbjct: 749 VHRNYGLAVVAANKLLELEPDNPGNYILVSNVFAEMGKWNNAKETRTRMAERGLRKNPAC 808

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGYLPDTNFVLHELEEEQKVQ 788
           SWIE  N +H F  G+  H  +  I+ +L ++   + +E GY+ DT FVLH+  EE+K+ 
Sbjct: 809 SWIEIGNNIHTFTSGDYCHRDSEAIHLKLSEITEMLRREGGYVEDTRFVLHDTSEEEKID 868

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
            L +HSE+IA+AFGLIST    PIR+ KNLRVCGDCH   K +S +  R+IV+RD+NRFH
Sbjct: 869 MLHKHSERIAIAFGLISTRPGMPIRIAKNLRVCGDCHEFTKLVSKLFERDIVVRDANRFH 928

Query: 849 HIKDGKCSCNDYW 861
           H   G CSC D+W
Sbjct: 929 HFSGGSCSCEDFW 941



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 223/434 (51%), Gaps = 22/434 (5%)

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL----DV 318
           C    +R  L  + +   P R     V+   +       G+Q+H+ A+ TG +L    D 
Sbjct: 37  CKEGDLRQALRQLTTRAPPAREHYGWVLDLVAARRAAAEGRQVHAHAVTTG-SLNEDDDG 95

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +   LV MY +C   G VDD+R++F+ M    V SW A++  Y+ SG    EA++++  
Sbjct: 96  FLATKLVFMYGRC---GRVDDARRLFNGMPARTVFSWNALVGAYLSSGSAG-EAMRVYGA 151

Query: 379 MIQGQV---APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           M        AP+  T ASVLKACG   D     +V+  AVK G      V N+LI MYA+
Sbjct: 152 MRASAAPGSAPDGCTLASVLKACGAEGDGRCGGEVHGLAVKVGLDKSTLVANALIGMYAK 211

Query: 436 SGRMEDARKAFESLFE--KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            G ++ A + FE L +  +++ S+N++V    +N  + +A  L   ++  G   ++YT  
Sbjct: 212 CGLLDSALRVFEWLQQDARDVASWNSVVSGCVQNGRTLEALALFRGMQSAGFPMNSYTSV 271

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESN-HCIYNALISMYSRCANVEAAFQVFKEMED 552
           ++L   + +G +  G ++HA ++K G E N  C  NAL+ MY++   V++A +VF ++ +
Sbjct: 272 AVLQVCAELGLLSLGRELHAALLKCGSELNIQC--NALLVMYAKYGRVDSALRVFGQIAE 329

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           ++ ISW SM++ + ++ F A A++ F +ML  G +P+    +++ SA  H   ++ G + 
Sbjct: 330 KDYISWNSMLSCYVQNSFYAEAIDFFGEMLQHGFQPDHACVVSLSSALGHLSRLNNG-RE 388

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F +   +  +   ++    ++D+  + GS+  + +   SM +  D + W T L AC    
Sbjct: 389 FHAYAIKQRLHTDLQVGNTLMDMYIKCGSIECSAKVFESMGIR-DHISWTTIL-ACFAQS 446

Query: 673 DTELGKHAAEMILE 686
                  A EMILE
Sbjct: 447 SRH--SEALEMILE 458



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 74/145 (51%), Gaps = 1/145 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+GR+  A+F    M +    PD      +L +     +   GK VH  L R        
Sbjct: 545 NNGRLNGAVFLFTEMQKANIQPDSVALVSILVAIAGLSSLTKGKQVHGFLIRRNFPIEGP 604

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +++SL+ +YS CG +N A ++F+    K D+V W++MI++    G    AI +F  ML+ 
Sbjct: 605 VVSSLVDMYSGCGSMNYAIRVFERAKCK-DVVLWTAMINATGMHGHGKQAIDLFKRMLQT 663

Query: 175 GFCPNEYCFSAVIRACSNTENVAIG 199
           G  P+   F A++ ACS+++ V  G
Sbjct: 664 GLTPDHVSFLALLYACSHSKLVEEG 688


>gi|147843467|emb|CAN82070.1| hypothetical protein VITISV_010010 [Vitis vinifera]
          Length = 1005

 Score =  539 bits (1389), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 278/770 (36%), Positives = 450/770 (58%), Gaps = 10/770 (1%)

Query: 93   NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
            N  L + +H  + R     +S + N LI LYSKCGD++ A ++F  M ++ D VSW +M+
Sbjct: 245  NIELCRSIHGYVFRRDF--SSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDD-VSWGTMM 301

Query: 153  SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
            + Y + G  V+ + +F +M       N+    +   A + T ++  G  I+G  L+    
Sbjct: 302  AGYAHNGCFVEVLELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQ-QRI 360

Query: 213  DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
            DSD+ V   L+ M+ K   + E A ++F  +  ++ V W+ +I    Q G P +A+ LF 
Sbjct: 361  DSDILVATPLMVMYAKCG-ETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQ 419

Query: 273  DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            +M      P+R TL  ++ AC++L L   GK +H + ++  +  D+  G +LV MYAKC 
Sbjct: 420  EMQNQKMKPNRVTLMSILPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKC- 478

Query: 333  VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
              G    +   F+RM   ++++W ++I GY Q G     A+ +F  +    + P+  T  
Sbjct: 479  --GFFTAALTTFNRMSSRDIVTWNSLINGYAQIGD-PYNAIDMFYKLRLSAINPDAGTMV 535

Query: 393  SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF-ESLFE 451
             V+ AC  L D +    ++   VK G   D  V N+LI MYA+ G +  A   F ++ F 
Sbjct: 536  GVVPACALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFT 595

Query: 452  KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            K+ V++N ++ AY +N ++++A    H++       ++ TF S+L  A+ + A  +G   
Sbjct: 596  KDEVTWNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAF 655

Query: 512  HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
            HA II+ GF SN  + N+LI MY++C  +  + ++F EM+ ++ +SW +M++G+A HG  
Sbjct: 656  HACIIQMGFLSNTLVGNSLIDMYAKCGQLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHG 715

Query: 572  ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             RA+ +F  M    ++ + +++++VLSAC H GL+ EG K F SM D++ I   +EHYAC
Sbjct: 716  DRAIALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYAC 775

Query: 632  MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
            MVDLLGR+G   E L FI+ MP+  D  VW   LG+CR+H + +LG+ A + +++ +P++
Sbjct: 776  MVDLLGRAGLFDETLGFIKVMPVEPDAGVWGALLGSCRMHSNVKLGEVALDHLVKLEPRN 835

Query: 692  PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
            PA  ++LS++YA +G W      R +M +  L K  GCSW+E  NKVH F VG+ SHP+ 
Sbjct: 836  PAHFVVLSSIYAQSGRWADAGKARSKMNDLGLKKTPGCSWVELKNKVHAFRVGDKSHPQL 895

Query: 752  LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
              ++   + L  K+++ GY+PD + VL  +EEE K  +L+ HSE++A+ F L++T     
Sbjct: 896  ESMHLLWNTLLEKMEKIGYVPDRSCVLQNVEEEDKEMFLYSHSERLAITFALLNTPPGST 955

Query: 812  IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            I++ KNLRVC DCHT  K+IS +T R I++RD+ RFHH +DG CSCNDYW
Sbjct: 956  IQIVKNLRVCADCHTTTKFISKITTRRIIVRDATRFHHFEDGICSCNDYW 1005



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 169/639 (26%), Positives = 316/639 (49%), Gaps = 13/639 (2%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F + P  S  L N +I  +    +  +A+     M +KG  PD  T++ +LK+C  + N 
Sbjct: 86  FDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNL 145

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G   H  + R  LE +  I   L+ +YSK GDL  A ++F  M  KRD+V+W++MI+ 
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMP-KRDVVAWNAMIAG 204

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
                   +A+  F  M  +G  P+      +        N+ +   I+G++ +    D 
Sbjct: 205 LSQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFR---RDF 261

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
              V   LID++ K   D++ A +VFD+M +++ V W  M+      GC  + + LF  M
Sbjct: 262 SSAVSNGLIDLYSKCG-DVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKM 320

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            L     ++ +      A +E      GK++H  A++  +  D+ V   L+ MYAKC   
Sbjct: 321 KLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKC--- 377

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G  + ++++F  +   ++++W+AII   VQ+ G  +EA+ LF +M   ++ PN  T  S+
Sbjct: 378 GETEKAKQLFWGLQGRDLVAWSAIIAALVQT-GYPEEALSLFQEMQNQKMKPNRVTLMSI 436

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L AC +L    + + ++   VK     D   G +L+SMYA+ G    A   F  +  +++
Sbjct: 437 LPACADLSLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDI 496

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           V++N++++ YA+  +   A ++ +++  + +   A T   ++   + +  + +G  IH  
Sbjct: 497 VTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPACALLNDLDQGTCIHGL 556

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAAR 573
           I+K GFES+  + NALI MY++C ++ +A  +F + +  ++ ++W  +I  + ++G A  
Sbjct: 557 IVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVTWNVIIAAYMQNGHAKE 616

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           A+  F++M  +   PN +T+++VL A ++     EG   F +   + G +        ++
Sbjct: 617 AISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMA-FHACIIQMGFLSNTLVGNSLI 675

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           D+  + G L  + +    M    D + W   L    VHG
Sbjct: 676 DMYAKCGQLXYSEKLFNEMD-HKDTVSWNAMLSGYAVHG 713



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 212/439 (48%), Gaps = 10/439 (2%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD     + + W  MI   T+     +A+ ++  M+  G  PD++T + V+ AC+ 
Sbjct: 82  ARSVFDSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTG 141

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 G   H    R GL  DV +G  LVDMY+K    G +  +R+VFD+M   +V++W
Sbjct: 142 ALNLQEGVWFHGEIDRRGLERDVFIGAGLVDMYSKM---GDLKRAREVFDKMPKRDVVAW 198

Query: 356 TAIITGYVQSGGRDK-EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
            A+I G  QS   D  EAV  F  M    V P+  +  ++      L +  +   ++ + 
Sbjct: 199 NAMIAGLSQS--EDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYV 256

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
            +R       V N LI +Y++ G ++ AR+ F+ + +++ VS+ TM+  YA N    +  
Sbjct: 257 FRRD--FSSAVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVL 314

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           EL  +++   V  +  +  S    A+    + KG++IH   ++   +S+  +   L+ MY
Sbjct: 315 ELFDKMKLGNVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMY 374

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C   E A Q+F  ++ R++++W+++I    + G+   AL +F +M    +KPN +T +
Sbjct: 375 AKCGETEKAKQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLM 434

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L AC+   L+  G K       +  +   +     +V +  + G  T AL     M  
Sbjct: 435 SILPACADLSLLKLG-KSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMS- 492

Query: 655 SADVLVWRTFLGACRVHGD 673
           S D++ W + +      GD
Sbjct: 493 SRDIVTWNSLINGYAQIGD 511



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 110/474 (23%), Positives = 220/474 (46%), Gaps = 52/474 (10%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVG--CSLVDMYAKCTVDGSVDDSRKVFDR 346
           ++S+C  L       Q+H+  I +G      +    +L  ++ KC      D +R VFD 
Sbjct: 38  LLSSCKHLNPLL---QIHAQIIVSGFKHHHSITHLINLYSLFHKC------DLARSVFDS 88

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
             + + + W ++I  Y +S   + EA++++  M++  + P+ +TF  VLKAC   L  N+
Sbjct: 89  TPNPSRILWNSMIRAYTRSKQYN-EALEMYYCMVEKGLEPDKYTFTFVLKACTGAL--NL 145

Query: 407 AEQVYTHAV--KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
            E V+ H    +RG   D  +G  L+ MY++ G ++ AR+ F+ + ++++V++N M+   
Sbjct: 146 QEGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGL 205

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           +++ +  +A +    ++  GV  S+ +  +L  G   +  I     IH  + +  F S  
Sbjct: 206 SQSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNIELCRSIHGYVFRRDFSS-- 263

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + N LI +YS+C +V+ A +VF +M D++ +SW +M+ G+A +G     LE+F KM   
Sbjct: 264 AVSNGLIDLYSKCGDVDVARRVFDQMVDQDDVSWGTMMAGYAHNGCFVEVLELFDKMKLG 323

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWK------------------HFRSMYDEHGIVQRM 626
            ++ N ++ ++   A +    + +G +                      MY + G  ++ 
Sbjct: 324 NVRINKVSAVSAFLAAAETIDLEKGKEIHGCALQQRIDSDILVATPLMVMYAKCGETEKA 383

Query: 627 EH------------YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVH 671
           +             ++ ++  L ++G   EAL   + M    +  + +   + L AC   
Sbjct: 384 KQLFWGLQGRDLVAWSAIIAALVQTGYPEEALSLFQEMQNQKMKPNRVTLMSILPACADL 443

Query: 672 GDTELGKHAAEMILEQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
              +LGK      ++ D   D +    L ++YA  G +        RM  R+++
Sbjct: 444 SLLKLGKSIHCFTVKADMDSDLSTGTALVSMYAKCGFFTAALTTFNRMSSRDIV 497



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 180/420 (42%), Gaps = 52/420 (12%)

Query: 36  FIAQPTTSEPLSNRLIYHLND--------GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           F A  TT   +S+R I   N         G    AI     +     +PD  T   ++ +
Sbjct: 481 FTAALTTFNRMSSRDIVTWNSLINGYAQIGDPYNAIDMFYKLRLSAINPDAGTMVGVVPA 540

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C    +   G  +H L+ +   E +  + N+LI +Y+KCG L  A  +F      +D V+
Sbjct: 541 CALLNDLDQGTCIHGLIVKLGFESDCHVKNALIDMYAKCGSLPSAEFLFNKTDFTKDEVT 600

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W+ +I++Y+  G   +AI  F +M    F PN   F +V+ A +       G   +  ++
Sbjct: 601 WNVIIAAYMQNGHAKEAISSFHQMRLENFHPNSVTFVSVLPAAAYLAAFREGMAFHACII 660

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           + G+  S+  VG +LIDM+ K    L  + K+F++M  K+TV W  M++     G    A
Sbjct: 661 QMGFL-SNTLVGNSLIDMYAKCG-QLXYSEKLFNEMDHKDTVSWNAMLSGYAVHGHGDRA 718

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVD 326
           I LF  M  S    D  +   V+SAC    L   G+++ HS + +  +  D+     +VD
Sbjct: 719 IALFSLMQESQVQIDSVSFVSVLSACRHXGLVEEGRKIFHSMSDKYHIKPDLEHYACMVD 778

Query: 327 MYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           +  +    G  D++      M ++ +   W A++            + ++ S++  G+VA
Sbjct: 779 LLGRA---GLFDETLGFIKVMPVEPDAGVWGALLG-----------SCRMHSNVKLGEVA 824

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            +H            L   N A  V                  L S+YA+SGR  DA KA
Sbjct: 825 LDHLV---------KLEPRNPAHFVV-----------------LSSIYAQSGRWADAGKA 858



 Score = 89.0 bits (219), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 65/285 (22%), Positives = 133/285 (46%), Gaps = 16/285 (5%)

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N+  +  +L +C +L   N   Q++   +  G      + + LI++Y+   + + AR  F
Sbjct: 31  NYLHYPRLLSSCKHL---NPLLQIHAQIIVSGFKHHHSITH-LINLYSLFHKCDLARSVF 86

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           +S    + + +N+M+ AY ++    +A E+ + + + G+    YTF  +L   +    + 
Sbjct: 87  DSTPNPSRILWNSMIRAYTRSKQYNEALEMYYCMVEKGLEPDKYTFTFVLKACTGALNLQ 146

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G   H  I + G E +  I   L+ MYS+  +++ A +VF +M  R+V++W +MI G +
Sbjct: 147 EGVWFHGEIDRRGLERDVFIGAGLVDMYSKMGDLKRAREVFDKMPKRDVVAWNAMIAGLS 206

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           +      A++ F  M   G++P+ ++ + +         I    +  RS+   HG V R 
Sbjct: 207 QSEDPCEAVDFFRSMQLVGVEPSSVSLLNLFPGICKLSNI----ELCRSI---HGYVFRR 259

Query: 627 EHYAC----MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +  +     ++DL  + G +  A      M +  D + W T +  
Sbjct: 260 DFSSAVSNGLIDLYSKCGDVDVARRVFDQM-VDQDDVSWGTMMAG 303


>gi|147801010|emb|CAN60118.1| hypothetical protein VITISV_016374 [Vitis vinifera]
          Length = 1166

 Score =  539 bits (1388), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 292/811 (36%), Positives = 477/811 (58%), Gaps = 12/811 (1%)

Query: 50   LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
            ++ + + G   + +     M Q+G   + +T++ +  SC    +  LG  V   + +   
Sbjct: 269  MVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGF 328

Query: 110  EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            E +  + NSLIS++S    + EA  +F  M N+ DI+SW++MIS+Y + G   +++  F 
Sbjct: 329  EDSVSVANSLISMFSSFSSVEEACYVFDHM-NECDIISWNAMISAYAHHGLCRESLRCFH 387

Query: 170  EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
             M  L    N    S+++  CS+ +N+  G  I+G ++K G  DS+VC+   L+ ++ + 
Sbjct: 388  WMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEA 446

Query: 230  SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
                E A  VF  MTE++ + W  M+    Q G   D +++  +++  G + +  T +  
Sbjct: 447  GRS-EDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFASA 505

Query: 290  VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
            ++ACS  E     K +H+  I  G    + VG +LV MY K    G + +++KV   M  
Sbjct: 506  LAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKL---GMMMEAKKVLQTMPQ 562

Query: 350  HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG---NLLDSNV 406
             + ++W A+I G+ ++     EAVK +  + +  +  N+ T  SVL AC    +LL   +
Sbjct: 563  PDRVTWNALIGGHAENE-EPNEAVKAYKLIREKGIPANYITMVSVLGACSAPDDLLKHGM 621

Query: 407  AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
               ++ H V  G   DD V NSLI+MYA+ G +  +   F+ L  K+ +++N MV A A 
Sbjct: 622  P--IHAHIVLTGFESDDYVKNSLITMYAKCGDLNSSNYIFDGLGNKSPITWNAMVAANAH 679

Query: 467  NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
            +   E+A ++  E+ + GV    ++F+  L+  +++  + +G+Q+H  +IK GFES+  +
Sbjct: 680  HGCGEEALKIFGEMRNVGVNLDQFSFSGGLAATANLAVLEEGQQLHGLVIKLGFESDLHV 739

Query: 527  YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             NA + MY +C  +    ++  +  +R+ +SW  +I+ FA+HG   +A E F++ML  G 
Sbjct: 740  TNAAMDMYGKCGEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQKARETFHEMLKLGP 799

Query: 587  KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
            KP+ +T++++LSAC+H GL+ EG  ++ SM  E G+   +EH  C++DLLGRSG L+ A 
Sbjct: 800  KPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAE 859

Query: 647  EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
             FI+ MP+  + L WR+ L ACR+HG+ EL +  AE +LE DP D +A++L SN+ A++G
Sbjct: 860  GFIKEMPVPPNDLAWRSLLAACRIHGNLELARKTAEHLLELDPSDDSAYVLYSNVCATSG 919

Query: 707  HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
             WE V N+RK M   N+ K+  CSW++  +KVH F +GE  HP+   I A+L +L    K
Sbjct: 920  KWEDVENLRKEMGSNNIKKQPACSWVKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTK 979

Query: 767  EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
            E GY+PDT+F LH+++EEQK   L+ HSE++A+AFGLI+T +S  +R+FKNLRVCGDCH+
Sbjct: 980  EAGYVPDTSFALHDMDEEQKEYNLWNHSERLALAFGLINTPESSTLRIFKNLRVCGDCHS 1039

Query: 827  AIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
              K++S + GR+IVLRD  RFHH   GKCSC
Sbjct: 1040 VYKFVSGIVGRKIVLRDPYRFHHFSGGKCSC 1070



 Score =  225 bits (573), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 156/527 (29%), Positives = 279/527 (52%), Gaps = 21/527 (3%)

Query: 88  CIRSRNFHL-----------GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           C+ + NF L           GK +H+      +       N+LI++YSK G++  A  +F
Sbjct: 93  CLNAVNFPLKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVF 152

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M   R+  SWS+M+S YV  G   +A+ +F +M  LG  PN +  +++I ACS +  +
Sbjct: 153 DEM-RHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYM 211

Query: 197 AI-GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL-ESAYKVFDKMTEKNTVGWTLM 254
           A  G  ++GF++K G    DV VG AL+  +  GS+ L  +A K+F++M + N V WT +
Sbjct: 212 ADEGFQVHGFVVKTGIL-GDVYVGTALVHFY--GSIGLVYNAQKLFEEMPDHNVVSWTSL 268

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +   +  G P + + ++  M   G   ++ T + V S+C  LE    G Q+    I+ G 
Sbjct: 269 MVGYSDSGNPGEVLNVYQRMRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGF 328

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
              V V  SL+ M++  +   SV+++  VFD M + +++SW A+I+ Y    G  +E+++
Sbjct: 329 EDSVSVANSLISMFSSFS---SVEEACYVFDHMNECDIISWNAMISAYAHH-GLCRESLR 384

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            F  M       N  T +S+L  C ++ +      ++   VK G   + C+ N+L+++Y+
Sbjct: 385 CFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVVKLGLDSNVCICNTLLTLYS 444

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
            +GR EDA   F+++ E++L+S+N+M+  Y ++       ++L E+   G   +  TFAS
Sbjct: 445 EAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLKILAELLQMGKVMNHVTFAS 504

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
            L+  S+   + + + +HA II +GF     + NAL++MY +   +  A +V + M   +
Sbjct: 505 ALAACSNPECLIESKIVHALIIVAGFHDFLIVGNALVTMYGKLGMMMEAKKVLQTMPQPD 564

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            ++W ++I G A++     A++ +  +   GI  N IT ++VL ACS
Sbjct: 565 RVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSVLGACS 611



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 84/170 (49%), Gaps = 1/170 (0%)

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L G S I +   G+ +HA  I           N LI+MYS+  N+E A  VF EM  RN 
Sbjct: 101 LKGFSEITSQMAGKALHAFCIVGSVNLGIFQTNTLINMYSKFGNIEHARYVFDEMRHRNE 160

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
            SW++M++G+ + G    A+ +F +M   G++PNG    ++++ACS +G +++       
Sbjct: 161 ASWSTMLSGYVRVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHG 220

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
              + GI+  +     +V   G  G +  A +    MP   +V+ W + +
Sbjct: 221 FVVKTGILGDVYVGTALVHFYGSIGLVYNAQKLFEEMP-DHNVVSWTSLM 269


>gi|225449732|ref|XP_002267472.1| PREDICTED: pentatricopeptide repeat-containing protein At4g02750-like
            [Vitis vinifera]
          Length = 1058

 Score =  538 bits (1387), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 297/847 (35%), Positives = 480/847 (56%), Gaps = 63/847 (7%)

Query: 50   LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
            L  +  +GR+++A    + MT++    ++ +++ ++   +++ +    + +   +     
Sbjct: 240  LTGYAKEGRIEEAREVFESMTER----NVVSWNAMISGYVQNGDLKNARKLFDEMP---- 291

Query: 110  EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            E N    NS+++ Y  C  ++EA ++F  M  +R+ VSW  MIS YV+     +A  +FV
Sbjct: 292  EKNVASWNSVVTGYCHCYRMSEARELFDQMP-ERNSVSWMVMISGYVHISDYWEAWDVFV 350

Query: 170  EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            +M      P++  F  V+ A +  +++ +   +    +K GY + DV VG A+++ + + 
Sbjct: 351  KMCRTVARPDQSIFVVVLSAITGLDDLELIGSLRPIAIKTGY-EGDVVVGSAILNAYTRN 409

Query: 229  GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            GS+DL  A   F+ M E+N   WT MI    Q G   DAI+L+          +R     
Sbjct: 410  GSLDL--AMHFFETMPERNEYSWTTMIAAFAQCGRLDDAIQLY----------ERVPEQT 457

Query: 289  VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD---MYAKCTVDGSVDDSRKVFD 345
            V +  + +  +    ++     +  L  D  +  ++V    + A  T +G + +++ +F 
Sbjct: 458  VATKTAMMTAYAQVGRIQ----KARLIFDEILNPNVVAWNAIIAGYTQNGMLKEAKDLFQ 513

Query: 346  RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            +M   N  SW A+I G+VQ+    +EA++L  ++ +    P+  +F S L AC N+ D  
Sbjct: 514  KMPVKNSASWAAMIAGFVQNE-ESREALELLIELHRSGSVPSDSSFTSALSACANIGDVE 572

Query: 406  VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED------------------------ 441
            +   +++ A+K G   +  V N LISMYA+ G +ED                        
Sbjct: 573  IGRVIHSLAIKTGCQFNSYVMNGLISMYAKCGNVEDGSHVFRTIRVKDTVSWNSLISGLS 632

Query: 442  -------ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
                   AR  FE + ++++VS+  ++ AY +  + E A +L  ++   G+  +  T  S
Sbjct: 633  ENYMLDDARVVFEKMPKRDVVSWTAIISAYVQAGHGEVALDLFLDMLARGIKPNQLTVTS 692

Query: 495  LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
            LLS   ++GAI  GEQ HA I K GF++   + N+LI+MY +C   E  F VF+EM + +
Sbjct: 693  LLSACGNLGAIKLGEQFHALIFKLGFDTFLFVGNSLITMYFKCG-YEDGFCVFEEMPEHD 751

Query: 555  VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
            +I+W +++ G A++G    A++IF +M  +GI P+ ++++ VL ACSHAGL+ EGW HF 
Sbjct: 752  LITWNAVLVGCAQNGLGKEAIKIFEQMEVEGILPDQMSFLGVLCACSHAGLVDEGWAHFN 811

Query: 615  SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
            SM  ++GI+  + HY CMVDLLGR+G L+EA   I +MP+  D ++W   LGACR+H + 
Sbjct: 812  SMTQKYGIMPLVYHYTCMVDLLGRAGYLSEAEALIENMPVKPDSVIWEALLGACRIHRNV 871

Query: 675  ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
            ELG+  AE + +      A ++LLSNL+AS G W+ VA IRK MK++ L KE G SWI+ 
Sbjct: 872  ELGQRVAERLFQMTKPKSATYVLLSNLFASQGMWDKVAEIRKLMKDQGLTKEPGISWIQV 931

Query: 735  DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
             NK+H F  G+ +H +  EIY+ L +     +  GY+PDTNFVLH++EEEQK   L  HS
Sbjct: 932  KNKLHCFVTGDRTHDQIEEIYSALKEYYGCFRATGYMPDTNFVLHDVEEEQKQNELLYHS 991

Query: 795  EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
            EK+AV FG++ST    PI++ KNLR+CGDCHT +K++S VT R+I++RD NRFHH +DG 
Sbjct: 992  EKLAVVFGILSTPNGSPIQIIKNLRICGDCHTFMKFMSKVTLRKIIIRDGNRFHHFRDGS 1051

Query: 855  CSCNDYW 861
            CSC DYW
Sbjct: 1052 CSCGDYW 1058



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 176/662 (26%), Positives = 309/662 (46%), Gaps = 100/662 (15%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GRV++A    + M Q+    D+ +++ ++    ++      +L+        +   +++L
Sbjct: 185 GRVEEARRVFNEMIQR----DVVSWNSMINGYSQNGKVDEARLLFDAFVGKNIRTWTILL 240

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
                 Y+K G + EA ++F+SM  +R++VSW++MIS YV  G   +A  +F EM E   
Sbjct: 241 TG----YAKEGRIEEAREVFESM-TERNVVSWNAMISGYVQNGDLKNARKLFDEMPE--- 292

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
                            +NVA              ++S V   C    M          A
Sbjct: 293 -----------------KNVA-------------SWNSVVTGYCHCYRM--------SEA 314

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            ++FD+M E+N+V W +MI+    +    +A  +F+ M  +   PD+     V+SA + L
Sbjct: 315 RELFDQMPERNSVSWMVMISGYVHISDYWEAWDVFVKMCRTVARPDQSIFVVVLSAITGL 374

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           +       L   AI+TG   DV VG ++++ Y +   +GS+D +   F+ M + N  SWT
Sbjct: 375 DDLELIGSLRPIAIKTGYEGDVVVGSAILNAYTR---NGSLDLAMHFFETMPERNEYSWT 431

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I  + Q G  D +A++L+  + +  VA    T  +++ A   +     A  ++   + 
Sbjct: 432 TMIAAFAQCGRLD-DAIQLYERVPEQTVA----TKTAMMTAYAQVGRIQKARLIFDEILN 486

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                +    N++I+ Y ++G +++A+  F+ +  KN  S+  M+  + +N  S +A EL
Sbjct: 487 P----NVVAWNAIIAGYTQNGMLKEAKDLFQKMPVKNSASWAAMIAGFVQNEESREALEL 542

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
           L E+  +G   S  +F S LS  ++IG +  G  IH+  IK+G + N  + N LISMY++
Sbjct: 543 LIELHRSGSVPSDSSFTSALSACANIGDVEIGRVIHSLAIKTGCQFNSYVMNGLISMYAK 602

Query: 537 CANVEAAFQVFK-------------------------------EMEDRNVISWTSMITGF 565
           C NVE    VF+                               +M  R+V+SWT++I+ +
Sbjct: 603 CGNVEDGSHVFRTIRVKDTVSWNSLISGLSENYMLDDARVVFEKMPKRDVVSWTAIISAY 662

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            + G    AL++F  MLA GIKPN +T  ++LSAC + G I  G + F ++  + G    
Sbjct: 663 VQAGHGEVALDLFLDMLARGIKPNQLTVTSLLSACGNLGAIKLG-EQFHALIFKLGFDTF 721

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           +     ++ +  + G   +       MP   D++ W   L  C  +G   LGK A + I 
Sbjct: 722 LFVGNSLITMYFKCG-YEDGFCVFEEMP-EHDLITWNAVLVGCAQNG---LGKEAIK-IF 775

Query: 686 EQ 687
           EQ
Sbjct: 776 EQ 777



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 81/304 (26%), Positives = 149/304 (49%), Gaps = 27/304 (8%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+ I    R GR+E+AR+ F  + ++++VS+N+M++ Y++N   ++A  L     D  VG
Sbjct: 175 NTRIQELGRLGRVEEARRVFNEMIQRDVVSWNSMINGYSQNGKVDEARLLF----DAFVG 230

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            +  T+  LL+G +  G I +  +    + +S  E N   +NA+IS Y +  +++ A ++
Sbjct: 231 KNIRTWTILLTGYAKEGRIEEARE----VFESMTERNVVSWNAMISGYVQNGDLKNARKL 286

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F EM ++NV SW S++TG+      + A E+F +M     + N ++++ ++S   H    
Sbjct: 287 FDEMPEKNVASWNSVVTGYCHCYRMSEARELFDQM----PERNSVSWMVMISGYVHISDY 342

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM-PLS------ADVL 659
            E W  F  M      V R +    +V L   +G   + LE I S+ P++       DV+
Sbjct: 343 WEAWDVFVKMCR---TVARPDQSIFVVVLSAITG--LDDLELIGSLRPIAIKTGYEGDVV 397

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           V    L A   +G  +L  H  E + E++       I     +A  G  +    + +R+ 
Sbjct: 398 VGSAILNAYTRNGSLDLAMHFFETMPERNEYSWTTMIA---AFAQCGRLDDAIQLYERVP 454

Query: 720 ERNL 723
           E+ +
Sbjct: 455 EQTV 458


>gi|225460338|ref|XP_002280412.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Vitis vinifera]
          Length = 802

 Score =  538 bits (1385), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 293/795 (36%), Positives = 457/795 (57%), Gaps = 20/795 (2%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  TY+ L++   R+ +   GKL H  + ++  +P   +LN+L+ +Y KCG+ + A K+F
Sbjct: 18  DSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVAKKLF 77

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M  KR++VSW+S+IS Y   G   + +++F E        +++ FS  +  C  T ++
Sbjct: 78  DRM-PKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDL 136

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMI 255
            +G +I+  +   G     V +  +LIDM+ K G +D   A  VF+   E ++V W  +I
Sbjct: 137 RLGRLIHALITVSG-LGGPVLLTNSLIDMYCKCGRIDW--ARLVFESADELDSVSWNSLI 193

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS----GKQLHSWAIR 311
               ++G   + +RL + M+  G   + + L   + AC     F+S    GK LH  A++
Sbjct: 194 AGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSN--FSSSIECGKMLHGCAVK 251

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ----SGG 367
            GL LDV VG +L+D YAK    G ++D+ K+F  M D NV+ + A+I G++Q    +  
Sbjct: 252 LGLDLDVVVGTALLDTYAKI---GDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADE 308

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
              EA+ LF +M    + P+ FTF+S+LKAC  +      +Q++    K     D+ +GN
Sbjct: 309 FANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGN 368

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +L+ +Y+ SG +ED  K F S  + ++VS+ +++  + +N   E    L HE+  +G   
Sbjct: 369 ALVELYSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKP 428

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             +T + +LS  +++ A+  GEQIHA  IK+G  +   I N+ I MY++C ++++A   F
Sbjct: 429 DEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTF 488

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           KE ++ +++SW+ MI+  A+HG A  A+++F  M   GI PN IT++ VL ACSH GL+ 
Sbjct: 489 KETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVE 548

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           EG ++F  M  +HGI   ++H AC+VDLLGR+G L EA  FI       D ++WR+ L A
Sbjct: 549 EGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSA 608

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
           CRVH  T+ GK  AE ++E +P+  A+++LL N+Y  AG       IR  MK+R + KE 
Sbjct: 609 CRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEP 668

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
           G SWIE  N VH F  G+ SHP +  IY +L+++  +IK+  Y+ D   V    E + K 
Sbjct: 669 GLSWIEVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKD 727

Query: 788 QYLFQ-HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
             +   HSEK+AV FG+IS  +S P+RV KNLR C  CH  +K  S +  REI+LRD  R
Sbjct: 728 NSMVSYHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIR 787

Query: 847 FHHIKDGKCSCNDYW 861
           FH  +DG CSC DYW
Sbjct: 788 FHRFRDGSCSCGDYW 802



 Score =  124 bits (311), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 3/249 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + D    +A++    M  +G  P   T+S +LK+C     F  GK +H+ + +  L+ + 
Sbjct: 305 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE 364

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I N+L+ LYS  G + +  K F S   K D+VSW+S+I  +V  G+    + +F E+L 
Sbjct: 365 FIGNALVELYSLSGSIEDGLKCFHST-PKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF 423

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  P+E+  S ++ AC+N   V  G  I+ + +K G  +  + +  + I M+ K   D+
Sbjct: 424 SGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI-IQNSQICMYAKCG-DI 481

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           +SA   F +    + V W++MI+   Q GC ++A+ LF  M  SG  P+  T  GV+ AC
Sbjct: 482 DSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 541

Query: 294 SELELFTSG 302
           S   L   G
Sbjct: 542 SHGGLVEEG 550



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 1/209 (0%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ H+ +G+ +  +     +   G  PD  T S++L +C        G+ +H+   ++ +
Sbjct: 402 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGI 461

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
              ++I NS I +Y+KCGD++ AN  FK   N  DIVSWS MISS    G   +A+ +F 
Sbjct: 462 GNFTIIQNSQICMYAKCGDIDSANMTFKETKNP-DIVSWSVMISSNAQHGCAKEAVDLFE 520

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M   G  PN   F  V+ ACS+   V  G   +  + K      +V     ++D+  + 
Sbjct: 521 LMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRA 580

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRC 258
               E+   + D   E + V W  +++ C
Sbjct: 581 GRLAEAESFIMDSGFEGDPVMWRSLLSAC 609



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 62/117 (52%)

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+   + T+  L+  ++  G++  G+  H  +IK+ F+    + N L+ MY +C   + A
Sbjct: 14  GLPLDSVTYTKLVQCSTRTGSLIHGKLAHMHMIKTCFKPCLFLLNNLLYMYCKCGETDVA 73

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
            ++F  M  RNV+SW S+I+G+ + GF    + +F +     ++ +  T+   LS C
Sbjct: 74  KKLFDRMPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVC 130


>gi|302767396|ref|XP_002967118.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
 gi|300165109|gb|EFJ31717.1| hypothetical protein SELMODRAFT_87370 [Selaginella moellendorffii]
          Length = 903

 Score =  537 bits (1384), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 287/813 (35%), Positives = 479/813 (58%), Gaps = 24/813 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++AI+    M Q+G   D  T+  +LK+C R  +   G+ +H+ +  S LE  SV+ 
Sbjct: 107 GQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSIHAWIVESGLEGKSVLA 166

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N L+ +Y  CG +  A  +F+ M  +RD+VSW++ I++    G    A+ +F  M   G 
Sbjct: 167 NLLLHIYGSCGCVASAMLLFERM--ERDLVSWNAAIAANAQSGDLDMALELFQRMQLEGV 224

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P        +  C+        H I    ++    +  + V  AL   + +    L+ A
Sbjct: 225 RPARITLVITLSVCAKIRQARAIHSI----VRESGLEQTLVVSTALASAYARLG-HLDQA 279

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VFD+  E++ V W  M+    Q G   +A  LF  M+  G  P + TL    + CS L
Sbjct: 280 KEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHEGIPPSKVTLVNASTGCSSL 339

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+ +H+ A+  GL  D+ +G +L+DMY +C   GS +++R +F+  +  N +SW 
Sbjct: 340 RF---GRMIHACALEKGLDRDIVLGNALLDMYTRC---GSPEEARHLFE-GIPGNAVSWN 392

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA----EQVYT 412
            +I G  Q G + K A++LF  M    +AP   T+ ++L+A  +  +   A     ++++
Sbjct: 393 TMIAGSSQKG-QMKRALELFQRMQLEGMAPVRATYLNLLEAVASNPEEARAMAEGRKLHS 451

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE--SLFEK-NLVSYNTMVDAYAKNLN 469
             V  G A +  +G +++ MYA  G +++A  +F+  ++ ++ ++VS+N ++ + +++ +
Sbjct: 452 RIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHDVVSWNAIISSLSQHGH 511

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            ++A      ++  GV  +  T  ++L   +   A+ +G  +H  +  SG ESN  +  A
Sbjct: 512 GKRALGFFRRMDLHGVAPNQITCVAVLDACAGAAALTEGVIVHDHLRHSGMESNVFVATA 571

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           L SMY RC ++E+A ++F+++  +R+V+ + +MI  ++++G A  AL++F++M  +G +P
Sbjct: 572 LASMYGRCGSLESAREIFEKVAVERDVVIFNAMIAAYSQNGLAGEALKLFWRMQQEGSRP 631

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           +  ++++VLSACSH GL  EGW+ FRSM   +GI    +HYAC VD+LGR+G L +A E 
Sbjct: 632 DEQSFVSVLSACSHGGLADEGWEIFRSMRQSYGIAPSEDHYACAVDVLGRAGWLADAEEL 691

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           IR M +   VLVW+T LGACR + D + G+ A  M+ E DP D +A+++LSN+ A AG W
Sbjct: 692 IRCMDVKPTVLVWKTLLGACRKYRDVDRGRLANSMVRELDPGDESAYVVLSNILAGAGKW 751

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           +  A +R  M+ R L K+AG SWIE  ++VH+F  G+ SHP++ EIY EL++L  +I+E 
Sbjct: 752 DEAAEVRTEMESRGLRKQAGKSWIEIKSRVHEFVAGDRSHPRSEEIYRELERLHAEIREI 811

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+PDT  VL +++E +K + L QHSE++A+A G++S+S +  +RV KNLRVC DCH A 
Sbjct: 812 GYVPDTRLVLRKVDEAEKERLLCQHSERLAIALGVMSSS-TDTVRVMKNLRVCEDCHNAT 870

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS +  +EIV+RD++RFHH  DG CSC DYW
Sbjct: 871 KFISKIVNKEIVVRDTHRFHHFVDGSCSCGDYW 903



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/495 (27%), Positives = 238/495 (48%), Gaps = 27/495 (5%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           ++RA  +   ++ G  I+  ++  G  +    +G  L+ +++K    L    +VF ++  
Sbjct: 35  LLRAAGDDRLLSQGRRIHARIVSLGLEEE---LGNHLLRLYLKCE-SLGDVEEVFSRLEV 90

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++   WT +IT  T+ G  + AI +F  M   G   D  T   V+ AC+ L   + G+ +
Sbjct: 91  RDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACARLGDLSQGRSI 150

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+W + +GL     +   L+ +Y  C   G V  +  +F+RM + +++SW A I    QS
Sbjct: 151 HAWIVESGLEGKSVLANLLLHIYGSC---GCVASAMLLFERM-ERDLVSWNAAIAANAQS 206

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-- 423
           G  D  A++LF  M    V P   T    L  C  +  +        H++ R   L+   
Sbjct: 207 GDLDM-ALELFQRMQLEGVRPARITLVITLSVCAKIRQARA-----IHSIVRESGLEQTL 260

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V  +L S YAR G ++ A++ F+   E+++VS+N M+ AYA++ +  +A  L   +   
Sbjct: 261 VVSTALASAYARLGHLDQAKEVFDRAAERDVVSWNAMLGAYAQHGHMSEAALLFARMLHE 320

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+  S  T  +  +G SS+     G  IHA  ++ G + +  + NAL+ MY+RC + E A
Sbjct: 321 GIPPSKVTLVNASTGCSSLRF---GRMIHACALEKGLDRDIVLGNALLDMYTRCGSPEEA 377

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS-- 601
             +F+ +   N +SW +MI G ++ G   RALE+F +M  +G+ P   TY+ +L A +  
Sbjct: 378 RHLFEGIPG-NAVSWNTMIAGSSQKGQMKRALELFQRMQLEGMAPVRATYLNLLEAVASN 436

Query: 602 --HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE-ALEFIR-SMPLSAD 657
              A  ++EG K   S     G          +V +    G++ E A  F R +M    D
Sbjct: 437 PEEARAMAEGRK-LHSRIVSCGYASEPAIGTAVVKMYASCGAIDEAAASFQRGAMEDRHD 495

Query: 658 VLVWRTFLGACRVHG 672
           V+ W   + +   HG
Sbjct: 496 VVSWNAIISSLSQHG 510



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 147/292 (50%), Gaps = 12/292 (4%)

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
           G   P H     +L+A G+  D  +++    HA      L++ +GN L+ +Y +   + D
Sbjct: 25  GATRPAHLV--RLLRAAGD--DRLLSQGRRIHARIVSLGLEEELGNHLLRLYLKCESLGD 80

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
             + F  L  ++  S+ T++ AY ++  +++A  + H ++  GV   A TF ++L   + 
Sbjct: 81  VEEVFSRLEVRDEASWTTIITAYTEHGQAKRAIWMFHRMQQEGVRCDAVTFLAVLKACAR 140

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +G + +G  IHA I++SG E    + N L+ +Y  C  V +A  +F+ ME R+++SW + 
Sbjct: 141 LGDLSQGRSIHAWIVESGLEGKSVLANLLLHIYGSCGCVASAMLLFERME-RDLVSWNAA 199

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I   A+ G    ALE+F +M  +G++P  IT +  LS C+    I +  +   S+  E G
Sbjct: 200 IAANAQSGDLDMALELFQRMQLEGVRPARITLVITLSVCAK---IRQA-RAIHSIVRESG 255

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALE-FIRSMPLSADVLVWRTFLGACRVHG 672
           + Q +     +     R G L +A E F R+     DV+ W   LGA   HG
Sbjct: 256 LEQTLVVSTALASAYARLGHLDQAKEVFDRAA--ERDVVSWNAMLGAYAQHG 305


>gi|357127622|ref|XP_003565478.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Brachypodium distachyon]
          Length = 870

 Score =  537 bits (1383), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 297/843 (35%), Positives = 469/843 (55%), Gaps = 14/843 (1%)

Query: 23  PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           PS Q L  ++SP    +     P S+  ++     R       L L+   G   D  +Y 
Sbjct: 38  PSGQALEAAASPRGAEKSPDWVPTSDVNLHIQRLCRSGDLEEALGLLGSDG--VDDRSYG 95

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPN---SVILNSLISLYSKCGDLNEANKIFKSM 139
            +L+ C   R+   GK  H L+  S L  +   +V+   L+ +Y KCGDL  A ++F  M
Sbjct: 96  AVLQLCSEVRSLEGGKRAHFLVRASSLGRDGMDNVLGQKLVLMYLKCGDLENARRVFDEM 155

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
               D+  W++++S Y   G   + + +F +M   G  P+ Y  S V++  +   ++  G
Sbjct: 156 PQVSDVRVWTALMSGYAKAGDLREGVLLFRKMHCCGVRPDAYTISCVLKCIAGLGSIEDG 215

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            +++G L K G F S   VG AL+  + K S   + A  VFD M  ++ + W  MI+ CT
Sbjct: 216 EVVHGLLEKLG-FGSQCAVGNALMAFYAK-SNRTKDAILVFDGMPHRDVISWNSMISGCT 273

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             G    AI LF+ M L G   D  TL  V+ AC+EL L   G+ +H ++++TG      
Sbjct: 274 SNGLYDKAIELFVRMWLEGEELDSATLLSVLPACAELHLLFLGRVVHGYSVKTGFISQTS 333

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +   L+DMY+ C+       + K+F  M+  NV+SWTA+IT Y ++G  DK A  LF +M
Sbjct: 334 LANVLLDMYSNCS---DWRSTNKIFRNMVQKNVVSWTAMITSYTRAGLYDKVA-GLFQEM 389

Query: 380 IQGQVAPNHFTFASVLKA-CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
                 P+ F   S L A  GN L  +  + V+ +A++ G      V N+L+ MY + G 
Sbjct: 390 GLEGTRPDIFAITSALHAFAGNELLKH-GKSVHGYAIRNGMEKVLAVTNALMEMYVKCGN 448

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ME+A+  F+ +  K+++S+NT++  Y++N  + +AF L  E+    +  +A T   +L  
Sbjct: 449 MEEAKLIFDGVVSKDMISWNTLIGGYSRNNLANEAFSLFTEML-LQLRPNAVTMTCILPA 507

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
           A+S+ ++ +G ++HA  ++ G+  +  + NALI MY +C  +  A ++F  + ++N+ISW
Sbjct: 508 AASLSSLERGREMHAYALRRGYLEDDFVANALIDMYVKCGALLLARRLFDRLSNKNLISW 567

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           T M+ G+  HG    A+ +F +M   GI P+  ++ A+L ACSH+GL  EGW+ F +M  
Sbjct: 568 TIMVAGYGMHGRGRDAIALFEQMRVSGIAPDAASFSAILYACSHSGLRDEGWRFFDAMRK 627

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           EH I  R++HY CMVDLL  +G+L EA EFI SMP+  D  +W + L  CR+H + +L +
Sbjct: 628 EHKIEPRLKHYTCMVDLLINTGNLKEAYEFIDSMPIEPDSSIWVSLLRGCRIHRNVKLAE 687

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
             AE + E +P++   ++LL+N+YA A  WE V  ++ ++  R L +  GCSWIEA  KV
Sbjct: 688 EVAERVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKIGGRGLRENTGCSWIEAKGKV 747

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           H F     +HP+   I   L+++A +++E G+ P   + L   +     + L  HS K+A
Sbjct: 748 HVFIADNRNHPQGTRIAEFLNEVAKRMQEEGHDPKKKYALMGADNAVHGEALCGHSSKLA 807

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           VAFG+++ S+ + IRV KN RVC  CH A K+IS +  REI+LRDSNRFHH + G+CSC 
Sbjct: 808 VAFGVLNLSEGRLIRVTKNSRVCSHCHEAAKFISKMCSREIILRDSNRFHHFEQGRCSCR 867

Query: 859 DYW 861
            YW
Sbjct: 868 GYW 870


>gi|238478502|ref|NP_173097.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191338|gb|AEE29459.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 937

 Score =  536 bits (1382), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 281/815 (34%), Positives = 473/815 (58%), Gaps = 12/815 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ + + G  ++ I     M  +G   + ++ SL++ SC   ++  LG+ +   + +S L
Sbjct: 132 MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL 191

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E    + NSLIS+    G+++ AN IF  M ++RD +SW+S+ ++Y   G   ++  +F 
Sbjct: 192 ESKLAVENSLISMLGSMGNVDYANYIFDQM-SERDTISWNSIAAAYAQNGHIEESFRIFS 250

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M       N    S ++    + ++   G  I+G ++K G FDS VCV   L+ M+   
Sbjct: 251 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGA 309

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              +E A  VF +M  K+ + W  ++      G   DA+ L   MI SG   +  T +  
Sbjct: 310 GRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 368

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC   + F  G+ LH   + +GL  +  +G +LV MY K    G + +SR+V  +M  
Sbjct: 369 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI---GEMSESRRVLLQMPR 425

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNV 406
            +V++W A+I GY +    DK A+  F  M    V+ N+ T  SVL AC   G+LL+   
Sbjct: 426 RDVVAWNALIGGYAEDEDPDK-ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER-- 482

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + ++ + V  G   D+ V NSLI+MYA+ G +  ++  F  L  +N++++N M+ A A 
Sbjct: 483 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 542

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           + + E+  +L+ ++   GV    ++F+  LS A+ +  + +G+Q+H   +K GFE +  I
Sbjct: 543 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 602

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +NA   MYS+C  +    ++     +R++ SW  +I+   +HG+       F++ML  GI
Sbjct: 603 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 662

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP  +T++++L+ACSH GL+ +G  ++  +  + G+   +EH  C++DLLGRSG L EA 
Sbjct: 663 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 722

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            FI  MP+  + LVWR+ L +C++HG+ + G+ AAE + + +P+D + ++L SN++A+ G
Sbjct: 723 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 782

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE V N+RK+M  +N+ K+  CSW++  +KV  F +G+ +HP+T+EIYA+L+ +   IK
Sbjct: 783 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 842

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+ DT+  L + +EEQK   L+ HSE++A+A+ L+ST +   +R+FKNLR+C DCH+
Sbjct: 843 ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 902

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K++S V GR IVLRD  RFHH + G CSC DYW
Sbjct: 903 VYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 937



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 313/618 (50%), Gaps = 35/618 (5%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRN-FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M   G  P     + L+ +C RS + F  G  VH  + +S L  +  +  +++ LY   G
Sbjct: 49  MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 108

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            ++ + K+F+ M + R++VSW+S++  Y ++G+  + I ++  M   G   NE   S VI
Sbjct: 109 LVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 167

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEK 246
            +C   ++ ++G  I G ++K G  +S + V  +LI M   GS+ +++ A  +FD+M+E+
Sbjct: 168 SSCGLLKDESLGRQIIGQVVKSG-LESKLAVENSLISML--GSMGNVDYANYIFDQMSER 224

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           +T+ W  +     Q G   ++ R+F  M       +  T+S ++S    ++    G+ +H
Sbjct: 225 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 284

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
              ++ G    VCV  +L+ MYA     G   ++  VF +M   +++SW +++  +V   
Sbjct: 285 GLVVKMGFDSVVCVCNTLLRMYAGA---GRSVEANLVFKQMPTKDLISWNSLMASFVND- 340

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           GR  +A+ L   MI    + N+ TF S L AC           ++   V  G   +  +G
Sbjct: 341 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 400

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+L+SMY + G M ++R+    +  +++V++N ++  YA++ + +KA      +   GV 
Sbjct: 401 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 460

Query: 487 TSAYTFASLLSGASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
           ++  T  S+LS     G  + +G+ +HA I+ +GFES+  + N+LI+MY++C ++ ++  
Sbjct: 461 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 520

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F  +++RN+I+W +M+   A HG     L++  KM + G+  +  ++   LSA +   +
Sbjct: 521 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 580

Query: 606 ISEGWKHFRSMYDEHGIVQRM--EH----YACMVDLLGRSGSLTEALEFI-----RSMPL 654
           + EG +        HG+  ++  EH    +    D+  + G + E ++ +     RS+P 
Sbjct: 581 LEEGQQL-------HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP- 632

Query: 655 SADVLVWRTFLGACRVHG 672
                 W   + A   HG
Sbjct: 633 -----SWNILISALGRHG 645



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 153/556 (27%), Positives = 283/556 (50%), Gaps = 11/556 (1%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y+K G +  A  +F  M   R+ VSW++M+S  V  G  ++ +  F +M +LG  P+ +
Sbjct: 1   MYTKFGRVKPARHLFDIM-PVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSF 59

Query: 182 CFSAVIRACSNTENV-AIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKV 239
             ++++ AC  + ++   G  ++GF+ K G   SDV V  A++ ++ V G V    + KV
Sbjct: 60  VIASLVTACGRSGSMFREGVQVHGFVAKSGLL-SDVYVSTAILHLYGVYGLVS--CSRKV 116

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F++M ++N V WT ++   +  G P + I ++  M   G   +  ++S V+S+C  L+  
Sbjct: 117 FEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDE 176

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
           + G+Q+    +++GL   + V  SL+ M       G+VD +  +FD+M + + +SW +I 
Sbjct: 177 SLGRQIIGQVVKSGLESKLAVENSLISMLGSM---GNVDYANYIFDQMSERDTISWNSIA 233

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
             Y Q+ G  +E+ ++FS M +     N  T +++L   G++        ++   VK G 
Sbjct: 234 AAYAQN-GHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGF 292

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
               CV N+L+ MYA +GR  +A   F+ +  K+L+S+N+++ ++  +  S  A  LL  
Sbjct: 293 DSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCS 352

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +  +G   +  TF S L+   +     KG  +H  ++ SG   N  I NAL+SMY +   
Sbjct: 353 MISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGE 412

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +  + +V  +M  R+V++W ++I G+A+     +AL  F  M  +G+  N IT ++VLSA
Sbjct: 413 MSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSA 472

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           C   G + E  K   +     G          ++ +  + G L+ + +    +  + +++
Sbjct: 473 CLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNII 531

Query: 660 VWRTFLGACRVHGDTE 675
            W   L A   HG  E
Sbjct: 532 TWNAMLAANAHHGHGE 547


>gi|359475368|ref|XP_003631669.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 891

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 306/854 (35%), Positives = 483/854 (56%), Gaps = 31/854 (3%)

Query: 20  PSNPSRQNLPPSSS------PPFIAQPTTSE--PLSNRLIYHLNDGRVQKAIFTLDLMTQ 71
           P++P   NL  +S+       P +    TS+  P   R I   +  R      +  L   
Sbjct: 57  PTHPFSTNLTLASARWRHILAPTLKSRYTSKFLPPRRRPIQLFSAARSSPQFSSYGL--- 113

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
            GN  +   ++ L  S  ++      K +H+LL  +    +  I   L++LY+  GD++ 
Sbjct: 114 -GNQNEEIDFNFLFDSSTKTP---FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSL 169

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRAC 190
           +   F  +  K D+ +W+SMIS+YV+ G   +AI  F ++L +    P+ Y F  V++AC
Sbjct: 170 SRCTFDQIPQK-DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKAC 228

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTV 249
               +   G  I+ +  K G F  +V V  +LI M+ + G   +  A  +FD M  ++  
Sbjct: 229 GTLVD---GRKIHCWAFKLG-FQWNVFVAASLIHMYSRFGFTGI--ARSLFDDMPFRDMG 282

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  MI+   Q G    A+ +  +M L G   +  T+  ++  C +L   ++   +H + 
Sbjct: 283 SWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTVVSILPVCPQLGDISTAMLIHLYV 342

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I+ GL  D+ V  +L++MYAK    G+++D+RK F +M   +V+SW +II  Y Q+    
Sbjct: 343 IKHGLEFDLFVSNALINMYAKF---GNLEDARKAFQQMFITDVVSWNSIIAAYEQNDD-P 398

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV-GNS 428
             A   F  M      P+  T  S+        D   +  V+   ++RG  ++D V GN+
Sbjct: 399 VTAHGFFVKMQLNGFQPDLLTLVSLASIVAQSRDCKNSRSVHGFIMRRGWLMEDVVIGNA 458

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGT 487
           ++ MYA+ G ++ A K FE +  K+++S+NT++  YA+N  + +A E+   +E+   +  
Sbjct: 459 VVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIP 518

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           +  T+ S+L   + +GA+ +G +IH R+IK+    +  +   LI +Y +C  +  A  +F
Sbjct: 519 NQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKCGRLVDAMSLF 578

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
            ++   + ++W ++I+    HG A + L++F +ML +G+KP+ +T++++LSACSH+G + 
Sbjct: 579 YQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLLSACSHSGFVE 638

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           EG   FR M  E+GI   ++HY CMVDLLGR+G L  A +FI+ MPL  D  +W   LGA
Sbjct: 639 EGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPDASIWGALLGA 697

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
           CR+HG+ ELGK A++ + E D ++   ++LLSN+YA+ G WE V  +R   +ER L K  
Sbjct: 698 CRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKTP 757

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
           G S IE + KV  F+ G  SHPK  EIY EL  L  K+K  GY+PD +FVL ++EE++K 
Sbjct: 758 GWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFVLQDVEEDEKE 817

Query: 788 QYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRF 847
             L  HSE++A+AFG+IST    PIR+FKNLRVCGDCH A K+IS +T REIV+RDSNRF
Sbjct: 818 HILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQREIVVRDSNRF 877

Query: 848 HHIKDGKCSCNDYW 861
           HH KDG CSC DYW
Sbjct: 878 HHFKDGICSCGDYW 891


>gi|147795292|emb|CAN64990.1| hypothetical protein VITISV_001772 [Vitis vinifera]
          Length = 891

 Score =  536 bits (1381), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 311/885 (35%), Positives = 490/885 (55%), Gaps = 43/885 (4%)

Query: 1   MMTLSLPAPAKIPP------------PSSFKPSNPSRQNLPPSSS------PPFIAQPTT 42
           ++ L +  P   PP             S   P++P   NL  +S+       P +    T
Sbjct: 26  ILYLVVTVPGGAPPNMCLSLIGGSETESHGGPTHPFSTNLTLASARWRHILAPTLKSRHT 85

Query: 43  SE--PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
           S+  P   R I   +  R      +  L    GN  +   ++ L  S  ++      K +
Sbjct: 86  SKFLPPRRRPIQLFSAARSSPQFSSYGL----GNQNEEIDFNFLFDSSTKTP---FAKCL 138

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           H+LL  +    +  I   L++LY+  GD++ +   F  +  K D+ +W+SMIS+YV+ G 
Sbjct: 139 HALLVVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQK-DVYTWNSMISAYVHNGH 197

Query: 161 QVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
             +AI  F ++L +    P+ Y F  V++AC    +   G  I+ +  K G F  +V V 
Sbjct: 198 FHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTLVD---GRRIHCWAFKLG-FQWNVFVA 253

Query: 220 CALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
            +LI M+ + G   +  A  +FD M  ++   W  MI+   Q G    A+ +  +M L G
Sbjct: 254 ASLIHMYSRFGFTGI--ARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEG 311

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
              +  T+  ++  C +L   ++   +H + I+ GL  D+ V  +L++MYAK    G+++
Sbjct: 312 IKMNFVTVVSILPVCPQLGDISTAMLIHLYVIKHGLEFDLFVSNALINMYAKF---GNLE 368

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           D+RK F +M   +V+SW +II  Y Q+      A   F  M      P+  T  S+    
Sbjct: 369 DARKAFQQMFITDVVSWNSIIAAYEQNDD-PVTAHGFFVKMQLNGFQPDLLTLVSLASIV 427

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
               D   +  V+   ++RG  ++D V GN+++ MYA+ G ++ A K FE +  K+++S+
Sbjct: 428 AQSRDCKNSRSVHGFIMRRGWLMEDVVIGNAVVDMYAKLGLLDSAHKVFEIILVKDVISW 487

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           NT++  YA+N  + +A E+   +E+   +  +  T+ S+L   + +GA+ +G +IH R+I
Sbjct: 488 NTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMRIHGRVI 547

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K+    +  +   LI +Y +C  +  A  +F ++   + ++W ++I+    HG A + L+
Sbjct: 548 KTNLHLDVFVATCLIDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLK 607

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +ML +G+KP+ +T++++LSACSH+G + EG   FR M  E+GI   ++HY CMVDLL
Sbjct: 608 LFGEMLDEGVKPDHVTFVSLLSACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLL 666

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GR+G L  A  FI+ MPL  D  +W   LGACR+HG+ ELGK A++ + E D ++   ++
Sbjct: 667 GRAGYLEMAYGFIKDMPLQPDASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYV 726

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YA+ G WE V  +R   +ER L K  G S IE + KV  F+ G  SHPK  EIY 
Sbjct: 727 LLSNIYANVGKWEGVDKVRSLARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYE 786

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
           EL  L  K+K  GY+PD +FVL ++EE++K   L  HSE++A+AFG+IST    PIR+FK
Sbjct: 787 ELRVLTAKMKSLGYIPDYSFVLQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFK 846

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVCGDCH A K+IS +T REIV+RDSNRFHH KDG CSC DYW
Sbjct: 847 NLRVCGDCHNATKFISRITQREIVVRDSNRFHHFKDGICSCGDYW 891


>gi|218526158|sp|Q9M1V3.2|PP296_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g63370
          Length = 960

 Score =  536 bits (1380), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 284/810 (35%), Positives = 468/810 (57%), Gaps = 7/810 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G    A+     M  +G    L ++  LLK+C + R+   G  +HSLL +      
Sbjct: 157 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+N+L+S+Y+K  DL+ A ++F     K D V W+S++SSY   GK ++ + +F EM 
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN Y   + + AC       +G  I+  +LK     S++ V  ALI M+ +    
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG-K 335

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A ++  +M   + V W  +I    Q    ++A+  F DMI +G   D  +++ +++A
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
              L    +G +LH++ I+ G   ++ VG +L+DMY+KC +   +    + F RM D ++
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG---RAFLRMHDKDL 452

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT +I GY Q+     EA++LF D+ + ++  +     S+L+A   L    + ++++ 
Sbjct: 453 ISWTTVIAGYAQNDCH-VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +++G  LD  + N L+ +Y +   M  A + FES+  K++VS+ +M+ + A N N  +
Sbjct: 512 HILRKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A EL   + +TG+   +     +LS A+S+ A+ KG +IH  +++ GF     I  A++ 
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY+ C ++++A  VF  +E + ++ +TSMI  +  HG    A+E+F KM  + + P+ I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++A+L ACSHAGL+ EG    + M  E+ +    EHY C+VD+LGR+  + EA EF++ M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
                  VW   L ACR H + E+G+ AA+ +LE +P++P   +L+SN++A  G W  V 
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGYL 771
            +R +MK   + K  GCSWIE D KVHKF   + SHP++ EIY +L ++  K+ +E GY+
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYV 870

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
            DT FVLH ++E +KVQ L  HSE+IA+A+GL+ T     +R+ KNLRVC DCHT  K +
Sbjct: 871 ADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLV 930

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S +  R+IV+RD+NRFHH + G CSC D W
Sbjct: 931 SKLFRRDIVMRDANRFHHFESGLCSCGDSW 960



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 252/517 (48%), Gaps = 24/517 (4%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
           F+ V+  C     V+ G  ++  + K    F+ D   G  L+ M+ K GS+D   A KVF
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGKCGSLD--DAEKVF 139

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+M ++    W  MI      G P  A+ L+ +M + G      +   ++ AC++L    
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAII 359
           SG +LHS  ++ G      +  +LV MYAK   +  +  +R++FD   +  + + W +I+
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAK---NDDLSAARRLFDGFQEKGDAVLWNSIL 256

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           + Y  S G+  E ++LF +M     APN +T  S L AC     + + ++++   +K   
Sbjct: 257 SSYSTS-GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315

Query: 420 ALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              +  V N+LI+MY R G+M  A +    +   ++V++N+++  Y +NL  ++A E   
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++   G  +   +  S+++ +  +  +  G ++HA +IK G++SN  + N LI MYS+C 
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
                 + F  M D+++ISWT++I G+A++     ALE+F  +    ++ + +   ++L 
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495

Query: 599 ACS---HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           A S      ++ E   H         ++Q       +VD+ G+  ++  A     S+   
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-----LVDVYGKCRNMGYATRVFESIK-G 549

Query: 656 ADVLVWRTFLGACRVHGD----TELGKHAAEMILEQD 688
            DV+ W + + +  ++G+     EL +   E  L  D
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586


>gi|15234095|ref|NP_195043.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206840|sp|Q9SMZ2.1|PP347_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g33170
 gi|4455331|emb|CAB36791.1| putative protein [Arabidopsis thaliana]
 gi|7270265|emb|CAB80034.1| putative protein [Arabidopsis thaliana]
 gi|332660786|gb|AEE86186.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 990

 Score =  535 bits (1379), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 303/822 (36%), Positives = 476/822 (57%), Gaps = 34/822 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI----RSRNFHLGKLVHSLLTRSK 108
           +L  G+V++     + M  +    D+  ++L+LK+ +    +     L    HS    S 
Sbjct: 190 YLKFGKVKEGKVLFEEMPYR----DVVLWNLMLKAYLEMGFKEEAIDLSSAFHS----SG 241

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI------SSYVNRGKQV 162
           L PN + L  L  +    GD ++A ++ KS  N  D  S S +I      S Y++ G+  
Sbjct: 242 LNPNEITLRLLARI---SGDDSDAGQV-KSFANGNDASSVSEIIFRNKGLSEYLHSGQYS 297

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
             +  F +M+E     ++  F  ++      +++A+G  ++   LK G  D  + V  +L
Sbjct: 298 ALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG-LDLMLTVSNSL 356

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           I+M+ K       A  VFD M+E++ + W  +I    Q G   +A+ LF+ ++  G  PD
Sbjct: 357 INMYCKLR-KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415

Query: 283 RFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK--CTVDGSVDD 339
           ++T++ V+ A S L E  +  KQ+H  AI+     D  V  +L+D Y++  C  +  +  
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            R  FD      +++W A++ GY QS    K  +KLF+ M +     + FT A+V K CG
Sbjct: 476 ERHNFD------LVAWNAMMAGYTQSHDGHK-TLKLFALMHKQGERSDDFTLATVFKTCG 528

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L   N  +QV+ +A+K G  LD  V + ++ MY + G M  A+ AF+S+   + V++ T
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+    +N   E+AF +  ++   GV    +T A+L   +S + A+ +G QIHA  +K  
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             ++  +  +L+ MY++C +++ A+ +FK +E  N+ +W +M+ G A+HG     L++F 
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M + GIKP+ +T+I VLSACSH+GL+SE +KH RSM+ ++GI   +EHY+C+ D LGR+
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G + +A   I SM + A   ++RT L ACRV GDTE GK  A  +LE +P D +A++LLS
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA+A  W+ +   R  MK   + K+ G SWIE  NK+H F V + S+ +T  IY ++ 
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
            +   IK+ GY+P+T+F L ++EEE+K + L+ HSEK+AVAFGL+ST  S PIRV KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VCGDCH A+KYI+ V  REIVLRD+NRFH  KDG CSC DYW
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 151/609 (24%), Positives = 281/609 (46%), Gaps = 62/609 (10%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
            L++ I S +  LGK  H+ +   +  P   ++N+LIS+YSKCG L  A ++F  M + R
Sbjct: 45  FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-R 103

Query: 144 DIVSWSSMISSYVNRGKQV-----DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           D+VSW+S++++Y    + V      A  +F  + +     +    S +++ C ++  V  
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
               +G+  K G  D D  V  AL+++++K G V  +    +F++M  ++ V W LM+  
Sbjct: 164 SESFHGYACKIG-LDGDEFVAGALVNIYLKFGKV--KEGKVLFEEMPYRDVVLWNLMLKA 220

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTL------SGVVSACSELELFTSGKQLHSWAIR 311
             ++G   +AI L      SG  P+  TL      SG  S   +++ F +G         
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANG--------- 271

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
                                     +D+  V + +  +  +S       Y+ S G+   
Sbjct: 272 --------------------------NDASSVSEIIFRNKGLS------EYLHS-GQYSA 298

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            +K F+DM++  V  +  TF  +L     +    + +QV+  A+K G  L   V NSLI+
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY +  +   AR  F+++ E++L+S+N+++   A+N    +A  L  ++   G+    YT
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418

Query: 492 FASLLSGASSI-GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
             S+L  ASS+   +   +Q+H   IK    S+  +  ALI  YSR   ++ A ++  E 
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFER 477

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
            + ++++W +M+ G+ +     + L++F  M   G + +  T   V   C     I++G 
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG- 536

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
           K   +   + G    +   + ++D+  + G ++ A     S+P+  DV  W T +  C  
Sbjct: 537 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTMISGCIE 595

Query: 671 HGDTELGKH 679
           +G+ E   H
Sbjct: 596 NGEEERAFH 604


>gi|15234006|ref|NP_193610.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206861|sp|Q9SN39.1|PP320_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g18750, chloroplastic; Flags: Precursor
 gi|4539394|emb|CAB37460.1| putative protein [Arabidopsis thaliana]
 gi|7268669|emb|CAB78877.1| putative protein [Arabidopsis thaliana]
 gi|332658686|gb|AEE84086.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 871

 Score =  534 bits (1375), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 278/788 (35%), Positives = 468/788 (59%), Gaps = 10/788 (1%)

Query: 77  DLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           D+D  +L  +L+ C  S++   GK V + +  +    +S + + L  +Y+ CGDL EA++
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F  +  ++ +  W+ +++     G    +I +F +M+  G   + Y FS V ++ S+  
Sbjct: 151 VFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           +V  G  ++GF+LK G+ + +  VG +L+  ++K    ++SA KVFD+MTE++ + W  +
Sbjct: 210 SVHGGEQLHGFILKSGFGERN-SVGNSLVAFYLKNQ-RVDSARKVFDEMTERDVISWNSI 267

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I      G     + +F+ M++SG   D  T+  V + C++  L + G+ +HS  ++   
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           + +     +L+DMY+KC   G +D ++ VF  M D +V+S+T++I GY + G    EAVK
Sbjct: 328 SREDRFCNTLLDMYSKC---GDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-LAGEAVK 383

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +M +  ++P+ +T  +VL  C      +  ++V+    +     D  V N+L+ MYA
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-EDTGVGTSAYTFA 493
           + G M++A   F  +  K+++S+NT++  Y+KN  + +A  L + + E+        T A
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
            +L   +S+ A  KG +IH  I+++G+ S+  + N+L+ MY++C  +  A  +F ++  +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +++SWT MI G+  HGF   A+ +F +M   GI+ + I+++++L ACSH+GL+ EGW+ F
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M  E  I   +EHYAC+VD+L R+G L +A  FI +MP+  D  +W   L  CR+H D
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 683

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            +L +  AE + E +P++   ++L++N+YA A  WE V  +RKR+ +R L K  GCSWIE
Sbjct: 684 VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
              +V+ F  G++S+P+T  I A L ++  ++ E GY P T + L + EE +K + L  H
Sbjct: 744 IKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGH 803

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+A G+IS+   K IRV KNLRVCGDCH   K++S +T REIVLRDSNRFH  KDG
Sbjct: 804 SEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDG 863

Query: 854 KCSCNDYW 861
            CSC  +W
Sbjct: 864 HCSCRGFW 871



 Score =  219 bits (558), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 282/573 (49%), Gaps = 20/573 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G    +I     M   G   D  T+S + KS    R+ H G+ +H  + +S     + + 
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSL++ Y K   ++ A K+F  M  +RD++SW+S+I+ YV+ G     + +FV+ML  G 
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +     +V   C+++  +++G  ++   +K  +   D      L+DM+ K   DL+SA
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN-TLLDMYSKCG-DLDSA 350

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             VF +M++++ V +T MI    + G   +A++LF +M   G  PD +T++ V++ C+  
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L   GK++H W     L  D+ V  +L+DMYAKC   GS+ ++  VF  M   +++SW 
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC---GSMQEAELVFSEMRVKDIISWN 467

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            II GY ++   + EA+ LF+ ++ + + +P+  T A VL AC +L   +   +++ + +
Sbjct: 468 TIIGGYSKNCYAN-EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + G   D  V NSL+ MYA+ G +  A   F+ +  K+LVS+  M+  Y  +   ++A  
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI-----HARIIKSGFESNHCIYNAL 530
           L +++   G+     +F SLL   S  G + +G +      H   I+   E   CI    
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI---- 642

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + M +R  ++  A++  + M    +   W +++ G   H     A ++  K+    ++P 
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPE 700

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
              Y  +++         E  K  R    + G+
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 188/349 (53%), Gaps = 12/349 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G  +K +     M   G   DL T   +   C  SR   LG+ VHS+  ++     
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+L+ +YSKCGDL+ A  +F+ M + R +VS++SMI+ Y   G   +A+ +F EM 
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEME 389

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           E G  P+ Y  +AV+  C+    +  G  ++ + +K      D+ V  AL+DM+ K GS 
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGS- 447

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGV 289
            ++ A  VF +M  K+ + W  +I   ++     +A+ LF +++L    F PD  T++ V
Sbjct: 448 -MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACV 505

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + AC+ L  F  G+++H + +R G   D  V  SLVDMYAKC   G++  +  +FD +  
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC---GALLLAHMLFDDIAS 562

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +++SWT +I GY    G  KEA+ LF+ M Q  +  +  +F S+L AC
Sbjct: 563 KDLVSWTVMIAGYGMH-GFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610


>gi|357440579|ref|XP_003590567.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479615|gb|AES60818.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1212

 Score =  533 bits (1374), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 292/828 (35%), Positives = 473/828 (57%), Gaps = 17/828 (2%)

Query: 44  EPLSNRLIYHLND--------GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           + +S R I+  N         GR  +AI     M   G   D  T+  +LK+C   +   
Sbjct: 106 DKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERR 165

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS-MGNKRDIVSWSSMISS 154
           LG  +H +  +        + N+LI++Y+KCGDL  A  +F S +  K D VSW+S+IS+
Sbjct: 166 LGCEIHGVAVKCGYGGFVFVCNALIAMYAKCGDLGGARVLFDSGLMEKDDPVSWNSIISA 225

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           +V  G+ ++A+ +F  M E+G   N Y F + ++AC     + IG  I+  +LK  +F +
Sbjct: 226 HVGEGESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHF-T 284

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV V  ALI M+      +E A +VF  M  K+ V W  +++   Q     DAI  F DM
Sbjct: 285 DVYVSNALIAMYANCG-QMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAINHFQDM 343

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             SG  PD+ ++  +++A        +G ++H++AI+ G+  ++ +G SL+DMY KC   
Sbjct: 344 QDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCC- 402

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
             V      F+ M + +++SWT II GY Q+     +A+ L   +   ++  +     S+
Sbjct: 403 --VKYMGSAFEYMPEKDLISWTTIIAGYAQNECH-LDALNLLRKVQLEKMDVDPMMIGSI 459

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L AC  L    + ++++ + +K G A D  + N+++++Y     ++ AR  FES+  K++
Sbjct: 460 LLACSGLKSEKLIKEIHGYVLKGGLA-DILIQNAIVNVYGELALVDYARHVFESINSKDI 518

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           VS+ +M+     N  + +A EL + + +T +     T  S+L  A+++ ++ KG++IH  
Sbjct: 519 VSWTSMITCCVHNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKGKEIHGF 578

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           +I+ GF     I N+L+ MY+RC  +E A  +F  ++ R++I WTSMI     HG    A
Sbjct: 579 LIRKGFFLEGLIANSLVDMYARCGTMENARNIFNYVKQRDLILWTSMINANGMHGCGKDA 638

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           +++F KM  + + P+ IT++A+L ACSH+GL+ EG +HF  M +E+ +    EHYAC+VD
Sbjct: 639 IDLFSKMTDENVLPDHITFLALLYACSHSGLVVEGKQHFEIMKNEYKLEPWPEHYACLVD 698

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LL RS SL EA  F+R+MP+     VW   LGACR+H + +LG+ AA+ +L+ + ++   
Sbjct: 699 LLARSNSLEEAYHFVRNMPIEPSAEVWCALLGACRIHSNNDLGEVAAKKLLQLNTENSGN 758

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           ++L+SN +A+ G W  V  +R  MK   L K+ GCSWIE +NK+H F   + SHP+   I
Sbjct: 759 YVLVSNTFAADGRWNDVEEVRSIMKGNKLKKKPGCSWIEVENKIHTFMARDKSHPQCNNI 818

Query: 755 YAELDQLALKIKE-FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIR 813
           Y +L Q    +KE  GY   T  V H++ EE+K Q L+ HSE++A+ +GL+ TSK   +R
Sbjct: 819 YLKLAQFTKLLKEKGGYRAQTKLVFHDVCEEEKTQMLYGHSERLALGYGLLVTSKGTCLR 878

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + KNLR+C DCH   K  S ++ R +V+RD++RFHH + G CSC D+W
Sbjct: 879 ITKNLRICDDCHAFFKIASEISQRTLVVRDASRFHHFERGLCSCGDFW 926



 Score =  255 bits (651), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 189/679 (27%), Positives = 332/679 (48%), Gaps = 25/679 (3%)

Query: 31  SSSPPFIAQPTTS-EPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           S+ PP    PT S  P+S      L +       F  D +      P    YS  L+ C 
Sbjct: 4   STLPPNHTLPTFSHRPIS------LKEAFQSLTHFFTDPLPTTTRFPLQQAYSQALELCA 57

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSW 148
             +    G+ +H+   +++   +SV L++  + +Y KCG   +A K+F  M ++R I +W
Sbjct: 58  SHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGSFYDAVKVFDKM-SERTIFTW 116

Query: 149 SSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           ++MI + V+ G+ V+AI ++ EM  LG   + + F  V++AC   +   +G  I+G  +K
Sbjct: 117 NAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAFKERRLGCEIHGVAVK 176

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRD 266
           CGY    V V  ALI M+ K   DL  A  +FD   M + + V W  +I+     G   +
Sbjct: 177 CGY-GGFVFVCNALIAMYAKCG-DLGGARVLFDSGLMEKDDPVSWNSIISAHVGEGESLE 234

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+ LF  M   G   + +T    + AC        G+ +H+  +++    DV V  +L+ 
Sbjct: 235 ALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVILKSNHFTDVYVSNALIA 294

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MYA C   G ++D+ +VF  ML  + +SW  +++G VQ+     +A+  F DM      P
Sbjct: 295 MYANC---GQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMY-SDAINHFQDMQDSGQKP 350

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           +  +  +++ A G   +     +V+ +A+K G   +  +GNSLI MY +   ++    AF
Sbjct: 351 DQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMYGKCCCVKYMGSAF 410

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           E + EK+L+S+ T++  YA+N     A  LL +++   +        S+L   S + +  
Sbjct: 411 EYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIGSILLACSGLKSEK 470

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
             ++IH  ++K G  ++  I NA++++Y   A V+ A  VF+ +  ++++SWTSMIT   
Sbjct: 471 LIKEIHGYVLKGGL-ADILIQNAIVNVYGELALVDYARHVFESINSKDIVSWTSMITCCV 529

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            +G A  ALE+F  ++   I+P+ IT ++VL A +    + +G K         G     
Sbjct: 530 HNGLAIEALELFNSLIETNIEPDLITLVSVLYAAAALSSLKKG-KEIHGFLIRKGFFLEG 588

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
                +VD+  R G++  A      +    D+++W + + A  +HG    GK A ++  +
Sbjct: 589 LIANSLVDMYARCGTMENARNIFNYVK-QRDLILWTSMINANGMHG---CGKDAIDLFSK 644

Query: 687 QDPQD--PAAHILLSNLYA 703
              ++  P     L+ LYA
Sbjct: 645 MTDENVLPDHITFLALLYA 663



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 155/535 (28%), Positives = 262/535 (48%), Gaps = 19/535 (3%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
           P +  +S  +  C++ + +  G  ++   LK   +   V +    + M+ K GS     A
Sbjct: 44  PLQQAYSQALELCASHKALPQGQQLHAHFLKTQNYLDSVFLDTKFVHMYGKCGS--FYDA 101

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            KVFDKM+E+    W  MI  C   G   +AI L+ +M + G   D FT   V+ AC   
Sbjct: 102 VKVFDKMSERTIFTWNAMIGACVSAGRYVEAIELYKEMRVLGVSLDAFTFPCVLKACGAF 161

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR--MLDHNVMS 354
           +    G ++H  A++ G    V V  +L+ MYAKC   G +  +R +FD   M   + +S
Sbjct: 162 KERRLGCEIHGVAVKCGYGGFVFVCNALIAMYAKC---GDLGGARVLFDSGLMEKDDPVS 218

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W +II+ +V   G   EA+ LF  M +  V  N +TF S L+AC       +   ++   
Sbjct: 219 WNSIISAHVGE-GESLEALSLFRRMQEVGVESNTYTFVSALQACEGPTFIKIGRGIHAVI 277

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K     D  V N+LI+MYA  G+MEDA + F+S+  K+ VS+NT++    +N     A 
Sbjct: 278 LKSNHFTDVYVSNALIAMYANCGQMEDAERVFKSMLFKDCVSWNTLLSGMVQNDMYSDAI 337

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               +++D+G      +  ++++ +     +  G ++HA  IK G +SN  I N+LI MY
Sbjct: 338 NHFQDMQDSGQKPDQVSVLNMIAASGRSANLLAGMEVHAYAIKHGIDSNMHIGNSLIDMY 397

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C  V+     F+ M ++++ISWT++I G+A++     AL +  K+  + +  + +   
Sbjct: 398 GKCCCVKYMGSAFEYMPEKDLISWTTIIAGYAQNECHLDALNLLRKVQLEKMDVDPMMIG 457

Query: 595 AVLSACSHAGLISEGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           ++L ACS  GL SE   K       + G+   +   A +V++ G    +  A     S+ 
Sbjct: 458 SILLACS--GLKSEKLIKEIHGYVLKGGLADILIQNA-IVNVYGELALVDYARHVFESIN 514

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYASAG 706
            S D++ W + +  C  +G   L   A E+   L +   +P    L+S LYA+A 
Sbjct: 515 -SKDIVSWTSMITCCVHNG---LAIEALELFNSLIETNIEPDLITLVSVLYAAAA 565


>gi|359482004|ref|XP_002276764.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Vitis vinifera]
          Length = 681

 Score =  533 bits (1373), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 275/677 (40%), Positives = 414/677 (61%), Gaps = 7/677 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           VI+  + T+ +  G  ++  L+  GY          L++M+ K   +L+ A K+FD M +
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTN-HLVNMYSKCG-ELDHALKLFDTMPQ 68

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N V WT MI+  +Q     +AIR F  M + G +P +F  S  + AC+ L     GKQ+
Sbjct: 69  RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H  A++ G+  ++ VG +L DMY+KC   G++ D+ KVF+ M   + +SWTA+I GY + 
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKC---GAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G   +EA+  F  MI  +V  +     S L ACG L        V++  VK G   D  V
Sbjct: 186 G-EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 244

Query: 426 GNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           GN+L  MY+++G ME A   F    E +N+VSY  ++D Y +    EK   +  E+   G
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 304

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +  + +TF+SL+   ++  A+ +G Q+HA+++K  F+ +  + + L+ MY +C  +E A 
Sbjct: 305 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEQAI 364

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           Q F E+ D   I+W S+++ F +HG    A++IF +M+  G+KPN IT+I++L+ CSHAG
Sbjct: 365 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAG 424

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+ EG  +F SM   +G+V   EHY+C++DLLGR+G L EA EFI  MP   +   W +F
Sbjct: 425 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 484

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           LGACR+HGD E+GK AAE +++ +P++  A +LLSN+YA+   WE V ++R RM++ N+ 
Sbjct: 485 LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 544

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           K  G SW++   K H F   + SHP+   IY +LD L  +IK  GY+P T+ V  ++++ 
Sbjct: 545 KLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDMDDS 604

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
            K + L +HSE+IAVAF LIS    KPI V KNLRVC DCH+AIK+IS VTGR+I++RD+
Sbjct: 605 MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 664

Query: 845 NRFHHIKDGKCSCNDYW 861
           +RFHH  DG CSC DYW
Sbjct: 665 SRFHHFTDGSCSCGDYW 681



 Score =  226 bits (576), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 262/498 (52%), Gaps = 14/498 (2%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D +  + ++++  +++    GK +H+LL  +   P + + N L+++YSKCG+L+ A K+F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
            +M  +R++VSW++MIS      K  +AI  F  M   G  P ++ FS+ IRAC++  ++
Sbjct: 64  DTM-PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
            +G  ++   LK G   S++ VG  L DM+ K     + A KVF++M  K+ V WT MI 
Sbjct: 123 EMGKQMHCLALKFG-IGSELFVGSNLEDMYSKCGAMFD-ACKVFEEMPCKDEVSWTAMID 180

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
             +++G   +A+  F  MI      D+  L   + AC  L+    G+ +HS  ++ G   
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAV 373
           D+ VG +L DMY+K    G ++ +  VF   +D    NV+S+T +I GYV++   +K  +
Sbjct: 241 DIFVGNALTDMYSKA---GDMESASNVFG--IDSECRNVVSYTCLIDGYVETEQIEK-GL 294

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            +F ++ +  + PN FTF+S++KAC N        Q++   +K     D  V + L+ MY
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 354

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            + G +E A +AF+ + +   +++N++V  + ++   + A ++   + D GV  +A TF 
Sbjct: 355 GKCGLLEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFI 414

Query: 494 SLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME- 551
           SLL+G S  G + +G      + K+ G       Y+ +I +  R   ++ A +    M  
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 552 DRNVISWTSMITGFAKHG 569
           + N   W S +     HG
Sbjct: 475 EPNAFGWCSFLGACRIHG 492



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/410 (31%), Positives = 220/410 (53%), Gaps = 20/410 (4%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           L D   L+ V+   ++ +    GKQLH+  I  G      +   LV+MY+KC   G +D 
Sbjct: 2   LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC---GELDH 58

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKAC 398
           + K+FD M   N++SWTA+I+G  Q+  +  EA++ F  M I G+V P  F F+S ++AC
Sbjct: 59  ALKLFDTMPQRNLVSWTAMISGLSQN-SKFSEAIRTFCGMRICGEV-PTQFAFSSAIRAC 116

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +L    + +Q++  A+K G   +  VG++L  MY++ G M DA K FE +  K+ VS+ 
Sbjct: 117 ASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWT 176

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+D Y+K    E+A     ++ D  V    +   S L    ++ A   G  +H+ ++K 
Sbjct: 177 AMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL 236

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFK-EMEDRNVISWTSMITGFAKHGFAARALEI 577
           GFES+  + NAL  MYS+  ++E+A  VF  + E RNV+S+T +I G+ +     + L +
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSM---YDEHGIVQRMEHYACMV 633
           F ++   GI+PN  T+ +++ AC++   + +G + H + M   +DE   V  +     +V
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI-----LV 351

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
           D+ G+ G L +A++    +    ++  W + +     HG   LGK A ++
Sbjct: 352 DMYGKCGLLEQAIQAFDEIGDPTEI-AWNSLVSVFGQHG---LGKDAIKI 397



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 209/417 (50%), Gaps = 20/417 (4%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            + +  +AI T   M   G  P    +S  +++C    +  +GK +H L  +  +     
Sbjct: 83  QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L  +YSKCG + +A K+F+ M  K D VSW++MI  Y   G+  +A+  F +M++ 
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               +++   + + AC   +    G  ++  ++K G F+SD+ VG AL DM+ K   D+E
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAG-DME 259

Query: 235 SAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           SA  VF   +E +N V +T +I    +       + +F+++   G  P+ FT S ++ AC
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +       G QLH+  ++     D  V   LVDMY KC   G ++ + + FD + D   +
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC---GLLEQAIQAFDEIGDPTEI 376

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVY 411
           +W ++++ + Q  G  K+A+K+F  M+   V PN  TF S+L  C    L++  + +  Y
Sbjct: 377 AWNSLVSVFGQH-GLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL-DYFY 434

Query: 412 ----THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
               T+ V  G     CV    I +  R+GR+++A++    + FE N   + + + A
Sbjct: 435 SMDKTYGVVPGEEHYSCV----IDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 156/330 (47%), Gaps = 17/330 (5%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M  +    D       L +C   +    G+ VHS + +   E +  + 
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L  +YSK GD+  A+ +F      R++VS++ +I  YV   +    + +FVE+   G 
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PNE+ FS++I+AC+N   +  G  ++  ++K   FD D  V   L+DM+ K  + LE A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGL-LEQA 363

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            + FD++ +   + W  +++   Q G  +DAI++F  M+  G  P+  T   +++ CS  
Sbjct: 364 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHA 423

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM-LDH 350
            L   G       +    ++D   G    + +  C +D     G + ++++  +RM  + 
Sbjct: 424 GLVEEG-------LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 476

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           N   W + +      G  DKE  KL ++ +
Sbjct: 477 NAFGWCSFLGACRIHG--DKEMGKLAAEKL 504


>gi|356543252|ref|XP_003540076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 934

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 283/809 (34%), Positives = 480/809 (59%), Gaps = 15/809 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G V++ +     + + G + + +  + +++SC    +  LG  V   + +S L+    +
Sbjct: 138 NGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSGLDTTVSV 197

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            NSLIS++  C  + EA+ +F  M  +RD +SW+S+I++ V+ G    ++  F +M    
Sbjct: 198 ANSLISMFGNCDSIEEASCVFDDM-KERDTISWNSIITASVHNGHCEKSLEYFSQMRYTH 256

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
              +    SA++  C + +N+  G  ++G ++K G  +S+VCV  +L+ M+ +     E 
Sbjct: 257 AKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSG-LESNVCVCNSLLSMYSQAGKS-ED 314

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VF KM E++ + W  M+      G    A+ L ++M+ +    +  T +  +SAC  
Sbjct: 315 AEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYVTFTTALSACYN 374

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           LE     K +H++ I  GL  ++ +G +LV MY K    GS+  +++V   M D + ++W
Sbjct: 375 LETL---KIVHAFVILLGLHHNLIIGNALVTMYGKF---GSMAAAQRVCKIMPDRDEVTW 428

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYT 412
            A+I G+  +      A++ F+ + +  V  N+ T  ++L A     +LLD  +   ++ 
Sbjct: 429 NALIGGHADNK-EPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMP--IHA 485

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H V  G  L+  V +SLI+MYA+ G +  +   F+ L  KN  ++N ++ A A     E+
Sbjct: 486 HIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPGEE 545

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A +L+ ++ + G+    ++F+   +   ++  + +G+Q+H+ IIK GFESN  + NA + 
Sbjct: 546 ALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEGQQLHSLIIKHGFESNDYVLNATMD 605

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY +C  ++  F++  +   R+  SW  +I+  A+HGF  +A E F++ML  G++P+ +T
Sbjct: 606 MYGKCGEIDDVFRILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLDLGLRPDHVT 665

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++++LSACSH GL+ EG  +F SM  + G+   +EH  C++DLLGR+G LTEA  FI  M
Sbjct: 666 FVSLLSACSHGGLVDEGLAYFSSMSTKFGVPTGIEHCVCIIDLLGRAGKLTEAENFINKM 725

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+    LVWR+ L AC++HG+ EL + AA+ + E D  D +A++L SN+ AS   W  V 
Sbjct: 726 PVPPTDLVWRSLLAACKIHGNLELARKAADRLFELDSSDDSAYVLYSNVCASTRRWRDVE 785

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           N+RK+M+  N+ K+  CSW++  N+V  F +G+  HP+  EIYA+L++L   I+E GY+P
Sbjct: 786 NVRKQMESHNIKKKPACSWVKLKNQVTTFGMGDQYHPQNAEIYAKLEELKKIIREAGYMP 845

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           DT++ L + +EEQK   L+ HSE+IA+AFGLI++S+  P+R+FKNLRVCGDCH+  K +S
Sbjct: 846 DTSYSLQDTDEEQKEHNLWNHSERIALAFGLINSSEGSPLRIFKNLRVCGDCHSVFKMVS 905

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            + GR+I+LRD+ RFHH   GKCSC+DYW
Sbjct: 906 QIIGRKIILRDAYRFHHFSSGKCSCSDYW 934



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 172/655 (26%), Positives = 320/655 (48%), Gaps = 17/655 (2%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P  +E   N L+   +  G  QKA+     M + G  P     + L+ +C RS   
Sbjct: 15  FDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTACDRSGCM 74

Query: 95  HLGKL-VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
             G   VH+ + +  L  +  +  SL+  Y   G + E + +FK +  + +IVSW+S++ 
Sbjct: 75  TEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVDMVFKEI-EEPNIVSWTSLMV 133

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            Y   G   + + ++  +   G   NE   + VIR+C    +  +G+ + G ++K G  D
Sbjct: 134 GYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVLGSVIKSG-LD 192

Query: 214 SDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           + V V  +LI MF  G+ D +E A  VFD M E++T+ W  +IT     G    ++  F 
Sbjct: 193 TTVSVANSLISMF--GNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCEKSLEYFS 250

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M  +    D  T+S ++  C   +    G+ LH   +++GL  +VCV  SL+ MY++  
Sbjct: 251 QMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLLSMYSQA- 309

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G  +D+  VF +M + +++SW +++  +V +G   + A++L  +M+Q + A N+ TF 
Sbjct: 310 --GKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPR-ALELLIEMLQTRKATNYVTFT 366

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           + L AC NL      + V+   +  G   +  +GN+L++MY + G M  A++  + + ++
Sbjct: 367 TALSACYNL---ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKIMPDR 423

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG-ASSIGAIGKGEQI 511
           + V++N ++  +A N     A E  + + + GV  +  T  +LLS   S    +  G  I
Sbjct: 424 DEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSAFLSPDDLLDHGMPI 483

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA I+ +GFE    + ++LI+MY++C ++  +  +F  + ++N  +W ++++  A +G  
Sbjct: 484 HAHIVVAGFELETFVQSSLITMYAQCGDLNTSNYIFDVLANKNSSTWNAILSANAHYGPG 543

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             AL++  KM  DGI  +  ++    +   +  L+ EG +   S+  +HG          
Sbjct: 544 EEALKLIIKMRNDGIHLDQFSFSVAHAIIGNLTLLDEG-QQLHSLIIKHGFESNDYVLNA 602

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
            +D+ G+ G + +    I   P S     W   + A   HG  +  + A   +L+
Sbjct: 603 TMDMYGKCGEIDDVFR-ILPQPRSRSQRSWNILISALARHGFFQQAREAFHEMLD 656



 Score =  222 bits (565), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 144/483 (29%), Positives = 255/483 (52%), Gaps = 19/483 (3%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YSK G +  A  +F  M  +R+  SW++++S +V  G    A+  F  MLE G  P+ Y
Sbjct: 1   MYSKFGSIEHAQHVFDKMP-ERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSY 59

Query: 182 CFSAVIRACSNTENVAIGHI-IYGFLLKCGYFDSDVCVGCALIDMFVK----GSVDLESA 236
             ++++ AC  +  +  G   ++  ++KCG    DV VG +L+  +        VD+   
Sbjct: 60  VAASLVTACDRSGCMTEGAFQVHAHVIKCG-LACDVFVGTSLLHFYGTFGWVAEVDM--- 115

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             VF ++ E N V WT ++      GC ++ + ++  +   G   +   ++ V+ +C  L
Sbjct: 116 --VFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVL 173

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G Q+    I++GL   V V  SL+ M+  C    S++++  VFD M + + +SW 
Sbjct: 174 VDKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCD---SIEEASCVFDDMKERDTISWN 230

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           +IIT  V +G  +K +++ FS M       ++ T +++L  CG+  +      ++   VK
Sbjct: 231 SIITASVHNGHCEK-SLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVK 289

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   + CV NSL+SMY+++G+ EDA   F  + E++L+S+N+M+ ++  N N  +A EL
Sbjct: 290 SGLESNVCVCNSLLSMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALEL 349

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
           L E+  T   T+  TF + LS   ++  +   + +HA +I  G   N  I NAL++MY +
Sbjct: 350 LIEMLQTRKATNYVTFTTALSACYNLETL---KIVHAFVILLGLHHNLIIGNALVTMYGK 406

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
             ++ AA +V K M DR+ ++W ++I G A +     A+E F  +  +G+  N IT + +
Sbjct: 407 FGSMAAAQRVCKIMPDRDEVTWNALIGGHADNKEPNAAIEAFNLLREEGVPVNYITIVNL 466

Query: 597 LSA 599
           LSA
Sbjct: 467 LSA 469



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 238/474 (50%), Gaps = 14/474 (2%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A  VFDKM E+N   W  +++   ++G  + A++ F  M+  G  P  +  + +V+A
Sbjct: 8   IEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQKAMQFFCHMLEHGVRPSSYVAASLVTA 67

Query: 293 CSELELFTSGK-QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           C      T G  Q+H+  I+ GLA DV VG SL+  Y      G V +   VF  + + N
Sbjct: 68  CDRSGCMTEGAFQVHAHVIKCGLACDVFVGTSLLHFYGTF---GWVAEVDMVFKEIEEPN 124

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SWT+++ GY  +G   KE + ++  + +  V  N    A+V+++CG L+D  +  QV 
Sbjct: 125 IVSWTSLMVGYAYNGCV-KEVMSVYRRLRRDGVYCNENAMATVIRSCGVLVDKMLGYQVL 183

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K G      V NSLISM+     +E+A   F+ + E++ +S+N+++ A   N + E
Sbjct: 184 GSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIITASVHNGHCE 243

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           K+ E   ++  T   T   T ++LL    S   +  G  +H  ++KSG ESN C+ N+L+
Sbjct: 244 KSLEYFSQMRYTHAKTDYITISALLPVCGSAQNLRWGRGLHGMVVKSGLESNVCVCNSLL 303

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           SMYS+    E A  VF +M +R++ISW SM+     +G   RALE+  +ML      N +
Sbjct: 304 SMYSQAGKSEDAEFVFHKMRERDLISWNSMMASHVDNGNYPRALELLIEMLQTRKATNYV 363

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+   LSAC +     E  K   +     G+   +     +V + G+ GS+  A    + 
Sbjct: 364 TFTTALSACYNL----ETLKIVHAFVILLGLHHNLIIGNALVTMYGKFGSMAAAQRVCKI 419

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMI-LEQDPQDPAAHILLSNLYAS 704
           MP   D + W   +G    H D +    A E   L ++   P  +I + NL ++
Sbjct: 420 MP-DRDEVTWNALIGG---HADNKEPNAAIEAFNLLREEGVPVNYITIVNLLSA 469



 Score =  146 bits (368), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 187/369 (50%), Gaps = 26/369 (7%)

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MY+K    GS++ ++ VFD+M + N  SW  +++G+V+ G   K A++ F  M++  V P
Sbjct: 1   MYSKF---GSIEHAQHVFDKMPERNEASWNNLMSGFVRVGWYQK-AMQFFCHMLEHGVRP 56

Query: 387 NHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + +  AS++ AC   G + +   A QV+ H +K G A D  VG SL+  Y   G + +  
Sbjct: 57  SSYVAASLVTACDRSGCMTEG--AFQVHAHVIKCGLACDVFVGTSLLHFYGTFGWVAEVD 114

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
             F+ + E N+VS+ +++  YA N   ++   +   +   GV  +    A+++     + 
Sbjct: 115 MVFKEIEEPNIVSWTSLMVGYAYNGCVKEVMSVYRRLRRDGVYCNENAMATVIRSCGVLV 174

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
               G Q+   +IKSG ++   + N+LISM+  C ++E A  VF +M++R+ ISW S+IT
Sbjct: 175 DKMLGYQVLGSVIKSGLDTTVSVANSLISMFGNCDSIEEASCVFDDMKERDTISWNSIIT 234

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
               +G   ++LE F +M     K + IT  A+L  C  A       ++ R     HG+V
Sbjct: 235 ASVHNGHCEKSLEYFSQMRYTHAKTDYITISALLPVCGSA-------QNLRWGRGLHGMV 287

Query: 624 QR--MEHYAC----MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            +  +E   C    ++ +  ++G  +E  EF+       D++ W + + +   H D    
Sbjct: 288 VKSGLESNVCVCNSLLSMYSQAGK-SEDAEFVFHKMRERDLISWNSMMAS---HVDNGNY 343

Query: 678 KHAAEMILE 686
             A E+++E
Sbjct: 344 PRALELLIE 352


>gi|297849508|ref|XP_002892635.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338477|gb|EFH68894.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 809

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 281/780 (36%), Positives = 444/780 (56%), Gaps = 11/780 (1%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           +LLL+ C   +     + +  L+ ++ L    +    L+SL+ + G ++EA ++F+ +  
Sbjct: 41  ALLLERCSSLKEL---RHILPLIFKNGLYQEHLFQTKLVSLFCRYGSVDEAARVFEPIDK 97

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           K +++ ++ M+  +        A+  FV M +    P  Y F+ +++ C +   + +G  
Sbjct: 98  KLNVLYYT-MLKGFAKVSDLDKALKFFVRMRDDEVEPVVYNFTYLLKVCGDEAELRVGKE 156

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+G L+K G F  D+     L +M+ K    +  A KVFD+M E++ V W  ++   +Q 
Sbjct: 157 IHGLLVKSG-FSLDLFAMTGLENMYAKCR-QVHEARKVFDRMPERDLVSWNTIVAGYSQN 214

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  R A+ +   M      P   T+  V+ A S L L   GK++H +A+R G    V + 
Sbjct: 215 GMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVNIA 274

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +LVDMYAKC   GS+  +R +FD ML+ NV+SW ++I  YVQ+    KEA+ +F  M+ 
Sbjct: 275 TALVDMYAKC---GSLKTARLLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMVIFQKMLD 330

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V P   +    L AC +L D      ++  +V+     +  V NSLISMY +   ++ 
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELELDRNVSVVNSLISMYCKCKEVDT 390

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   F  L  + +VS+N M+  +A+N    +A     +++   V    +T+ S+++  + 
Sbjct: 391 AASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIAE 450

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +      + IH  ++++  + N  +  AL+ MY++C  +  A  +F  M +R+V +W +M
Sbjct: 451 LSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I G+  HG    ALE+F +M    I+PNG+T+++V+SACSH+GL+  G K F  M + + 
Sbjct: 511 IDGYGTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSHSGLVEAGLKCFHMMKENYS 570

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           I   M+HY  MVDLLGR+G L EA +FI  MP+   V V+   LGAC++H +    +  A
Sbjct: 571 IEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKVA 630

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           E + E +P+D   H+LL+N+Y +A  WE V  +R  M  + L K  GCS +E  N+VH F
Sbjct: 631 ERLFELNPEDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
             G T+HP + +IYA L++L  +IKE GY+PDTN +L  LE++ K Q L  HSEK+A++F
Sbjct: 691 FSGSTAHPSSKKIYAFLEKLICQIKEAGYVPDTNLIL-GLEDDVKEQLLSSHSEKLAISF 749

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GL++T+    I V KNLRVC DCH A KYIS+VTGREI++RD  RFHH K+G CSC DYW
Sbjct: 750 GLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIIVRDMQRFHHFKNGACSCGDYW 809



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 150/514 (29%), Positives = 259/514 (50%), Gaps = 18/514 (3%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P +  ++ LLK C       +GK +H LL +S    +   +  L ++Y+KC  ++EA K+
Sbjct: 133 PVVYNFTYLLKVCGDEAELRVGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVHEARKV 192

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +RD+VSW+++++ Y   G    A+ M   M E    P+     +V+ A S    
Sbjct: 193 FDRMP-ERDLVSWNTIVAGYSQNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRL 251

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           + IG  I+G+ ++ G FDS V +  AL+DM+ K GS  L++A  +FD M E+N V W  M
Sbjct: 252 IRIGKEIHGYAMRAG-FDSLVNIATALVDMYAKCGS--LKTARLLFDGMLERNVVSWNSM 308

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I    Q   P++A+ +F  M+  G  P   ++ G + AC++L     G+ +H  ++   L
Sbjct: 309 IDAYVQNENPKEAMVIFQKMLDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELEL 368

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             +V V  SL+ MY KC     VD +  +F ++    ++SW A+I G+ Q+ GR  EA+ 
Sbjct: 369 DRNVSVVNSLISMYCKCK---EVDTAASMFGKLQSRTIVSWNAMILGFAQN-GRPIEALN 424

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISM 432
            FS M    V P+ FT+ SV+ A   L  ++ A+  + H V     LD    V  +L+ M
Sbjct: 425 YFSQMQARTVKPDTFTYVSVITAIAELSITHHAK--WIHGVVMRNCLDKNVFVTTALVDM 482

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+ G +  AR  F+ + E+++ ++N M+D Y  +   + A EL  E++   +  +  TF
Sbjct: 483 YAKCGAIMIARLIFDMMSERHVTTWNAMIDGYGTHGIGKAALELFEEMQKGTIRPNGVTF 542

Query: 493 ASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            S++S  S  G +  G +  H        E +   Y A++ +  R   +  A+    +M 
Sbjct: 543 LSVISACSHSGLVEAGLKCFHMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMP 602

Query: 552 DRNVIS-WTSMITGFAKH---GFAARALEIFYKM 581
            +  ++ + +M+     H    FA +  E  +++
Sbjct: 603 VKPAVNVYGAMLGACQIHKNVNFAEKVAERLFEL 636



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/476 (29%), Positives = 239/476 (50%), Gaps = 26/476 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  + A+  ++LM ++   P   T   +L +    R   +GK +H    R+  +    
Sbjct: 213 QNGMARMALEMVNLMCEENLKPSFITIVSVLPAVSALRLIRIGKEIHGYAMRAGFDSLVN 272

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           I  +L+ +Y+KCG L  A  +F  M  +R++VSW+SMI +YV      +A+ +F +ML+ 
Sbjct: 273 IATALVDMYAKCGSLKTARLLFDGM-LERNVVSWNSMIDAYVQNENPKEAMVIFQKMLDE 331

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P +      + AC++  ++  G  I+   ++    D +V V  +LI M+ K   +++
Sbjct: 332 GVKPTDVSVMGALHACADLGDLERGRFIHKLSVELE-LDRNVSVVNSLISMYCKCK-EVD 389

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           +A  +F K+  +  V W  MI    Q G P +A+  F  M      PD FT   V++A +
Sbjct: 390 TAASMFGKLQSRTIVSWNAMILGFAQNGRPIEALNYFSQMQARTVKPDTFTYVSVITAIA 449

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           EL +    K +H   +R  L  +V V  +LVDMYAKC   G++  +R +FD M + +V +
Sbjct: 450 ELSITHHAKWIHGVVMRNCLDKNVFVTTALVDMYAKC---GAIMIARLIFDMMSERHVTT 506

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT-- 412
           W A+I GY  + G  K A++LF +M +G + PN  TF SV+ AC +   S + E      
Sbjct: 507 WNAMIDGY-GTHGIGKAALELFEEMQKGTIRPNGVTFLSVISACSH---SGLVEAGLKCF 562

Query: 413 HAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESLFEKNLVS-YNTMVDA--YAKN 467
           H +K   +++  + +  +++ +  R+GR+ +A      +  K  V+ Y  M+ A    KN
Sbjct: 563 HMMKENYSIEPSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKN 622

Query: 468 LN-SEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +N +EK  E L E+  ED G        A++   AS    +G   Q+   +++ G 
Sbjct: 623 VNFAEKVAERLFELNPEDGGYHV---LLANIYRAASMWEKVG---QVRVSMLRQGL 672


>gi|413944176|gb|AFW76825.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 823

 Score =  532 bits (1371), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 289/791 (36%), Positives = 468/791 (59%), Gaps = 13/791 (1%)

Query: 76  PDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSK--LEPNSVILNSLISLYSKCGDLNE 131
           P LD+Y+    L+ CI   +   G+ VH+ + +     + ++   N L++ Y+K G L  
Sbjct: 41  PKLDSYACARFLQRCIARGDARAGRAVHARVVQRGGVAQLDTFCANVLLNFYAKLGPLAT 100

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A ++F  M  +R+ VS+ +++  Y  RG+  +A+ +F  +   G   N +  + +++   
Sbjct: 101 ARRLFDGMP-ERNRVSFVTLMQGYALRGEFEEALELFRRLQREGHEVNHFVLTTILKVLV 159

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVG 250
             +   +   I+    K G+ D +  VG ALID + + G+V    A  VFD +  K+ V 
Sbjct: 160 TMDAPGLACGIHACACKLGH-DRNAFVGTALIDAYSLCGAVC--HARCVFDGIVGKDAVT 216

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           WT M++  ++   P  A+  F  M ++GF P+ F L+  + A   L     GK +H  ++
Sbjct: 217 WTAMVSCYSENDIPEYALNTFSKMRMTGFKPNPFVLTSALKAAVCLSSALLGKGIHGCSV 276

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           +T    +  VG +L+DMYAKC   G ++D+  +F+ +   +V+ W+ +I+ Y QS  +++
Sbjct: 277 KTLYDTEPHVGGALLDMYAKC---GDIEDAHAIFEMIPHDDVILWSFLISRYAQSC-QNE 332

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           +A ++F  M++  V PN F+ + VL+AC N+    + EQ++  A+K G   +  VGN+L+
Sbjct: 333 QAFEMFLRMMRSFVVPNEFSLSGVLQACANIAFLELGEQIHNLAIKLGYESELFVGNALM 392

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            MYA+   ME++ + F SL + N VS+NT++  Y ++  +E A  + HE+    + ++  
Sbjct: 393 DMYAKCRNMENSLEIFSSLQDANEVSWNTIIVGYCQSGFAEDALSVFHEMRAAHMLSTQV 452

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           TF+S+L   ++  +I    QIH+ I KS F ++  + N+LI  Y++C  +  A +VF+ +
Sbjct: 453 TFSSVLRACANTSSIKHAVQIHSLIEKSTFNNDTIVCNSLIDTYAKCGFIRDALKVFESI 512

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
            + +V+SW S+I+ +A HG A  ALE+F +M    IK N +T++++LS C   GL+++G 
Sbjct: 513 VECDVVSWNSIISAYALHGRATNALELFDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGL 572

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
             F SM  +H I   MEHY C+V LLGR+G LT+AL+FI  +P +   +VWR  L +C V
Sbjct: 573 WLFNSMMMDHRIKPSMEHYTCIVRLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVV 632

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           H +  LG++AAE +L+ +P D   ++LLSN+YA+AG  + VA  RK M+   + KEAG S
Sbjct: 633 HKNVALGRYAAEKVLDIEPHDETTYVLLSNMYAAAGILDEVALWRKSMRNVGVKKEAGLS 692

Query: 731 WIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYL 790
           W+E   +VH F VG   HP    I A L+ L LK    GY+PD N VLH+++EE+K + L
Sbjct: 693 WVEIKGEVHAFSVGSADHPDMRIINAMLEWLNLKASREGYVPDINVVLHDVDEEEKARML 752

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
           + HSE++A+A+GL  T    PIR+ KNLR C DCHT  K IS +  REI++RD NRFHH 
Sbjct: 753 WVHSERLALAYGLSMTPPGHPIRIMKNLRSCLDCHTMFKVISKIVQREIIVRDINRFHHF 812

Query: 851 KDGKCSCNDYW 861
           ++G CSC DYW
Sbjct: 813 EEGICSCGDYW 823



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 160/559 (28%), Positives = 286/559 (51%), Gaps = 20/559 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     + ++G+  +    + +LK  +      L   +H+   +   + N+ + 
Sbjct: 127 GEFEEALELFRRLQREGHEVNHFVLTTILKVLVTMDAPGLACGIHACACKLGHDRNAFVG 186

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +LI  YS CG +  A  +F  +  K D V+W++M+S Y        A++ F +M   GF
Sbjct: 187 TALIDAYSLCGAVCHARCVFDGIVGK-DAVTWTAMVSCYSENDIPEYALNTFSKMRMTGF 245

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN +  ++ ++A     +  +G  I+G  +K  Y D++  VG AL+DM+ K   D+E A
Sbjct: 246 KPNPFVLTSALKAAVCLSSALLGKGIHGCSVKTLY-DTEPHVGGALLDMYAKCG-DIEDA 303

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           + +F+ +   + + W+ +I+R  Q      A  +FL M+ S  +P+ F+LSGV+ AC+ +
Sbjct: 304 HAIFEMIPHDDVILWSFLISRYAQSCQNEQAFEMFLRMMRSFVVPNEFSLSGVLQACANI 363

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+Q+H+ AI+ G   ++ VG +L+DMYAKC    ++++S ++F  + D N +SW 
Sbjct: 364 AFLELGEQIHNLAIKLGYESELFVGNALMDMYAKCR---NMENSLEIFSSLQDANEVSWN 420

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            II GY QSG  + +A+ +F +M    +     TF+SVL+AC N      A Q+++   K
Sbjct: 421 TIIVGYCQSGFAE-DALSVFHEMRAAHMLSTQVTFSSVLRACANTSSIKHAVQIHSLIEK 479

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                D  V NSLI  YA+ G + DA K FES+ E ++VS+N+++ AYA +  +  A EL
Sbjct: 480 STFNNDTIVCNSLIDTYAKCGFIRDALKVFESIVECDVVSWNSIISAYALHGRATNALEL 539

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHCIYNALI 531
              +  + +  +  TF SLLS   S G + +G  +   +     IK   E   CI    +
Sbjct: 540 FDRMNKSDIKANDVTFVSLLSVCGSTGLVNQGLWLFNSMMMDHRIKPSMEHYTCI----V 595

Query: 532 SMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKP-N 589
            +  R   +  A +   ++    + + W ++++    H   A       K+L   I+P +
Sbjct: 596 RLLGRAGRLTDALKFIGDIPSTPSPMVWRALLSSCVVHKNVALGRYAAEKVL--DIEPHD 653

Query: 590 GITYIAVLSACSHAGLISE 608
             TY+ + +  + AG++ E
Sbjct: 654 ETTYVLLSNMYAAAGILDE 672


>gi|357143522|ref|XP_003572950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Brachypodium distachyon]
          Length = 874

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 288/783 (36%), Positives = 463/783 (59%), Gaps = 14/783 (1%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFKSMG 140
           S +LK C    +   G+ +H L  +   +   V +  +L+ +Y KCG + +   +F+ M 
Sbjct: 103 SRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKCGGVEDGRVVFEGM- 161

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            KR++V+W+S+++ YV      D + +F  M   G  PN + F++V+ A ++   V +G 
Sbjct: 162 PKRNVVTWTSLLTGYVQGRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAVDLGR 221

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++   +K G   S V V  +LI+M+ K  + +E A  VF +M  ++ V W  ++     
Sbjct: 222 RVHAQSVKFG-CRSTVFVCNSLINMYSKCGL-VEEAKAVFRQMETRDMVSWNTLMAGLLL 279

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                +A++LF D   S     + T S V+  C+ L+     +QLHS  ++ G   D  V
Sbjct: 280 NEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNV 339

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
             +++D Y+KC   G +DD+  +F  M    NV+SWTA+I G +Q+      A  LFS M
Sbjct: 340 MTAIMDAYSKC---GELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADI-PLAAALFSRM 395

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +  V PN FT+++VL A   +L      Q++   +K        VG +L++ Y++ G  
Sbjct: 396 REDNVKPNEFTYSTVLTASIPIL----LPQIHAQIIKTNYQHAPSVGTALLASYSKLGNT 451

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG- 498
           E+A   F+ +  K++V+++ M+  Y++  + + A  +  ++   G+  + +T +S +   
Sbjct: 452 EEALSIFKMIDHKDVVAWSAMLSCYSQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDAC 511

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
           AS    I +G Q HA  IK  ++   C+ +AL++MY+R  ++++A  VF+   DR+++SW
Sbjct: 512 ASPTAGIDQGRQFHAISIKYRYQDAICVGSALVTMYARKGSIDSARIVFERQTDRDLVSW 571

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
            SMI+G+A+HG++  AL+ F +M   GI+ +G T++AV+  C+HAGL+ EG ++F SM  
Sbjct: 572 NSMISGYAQHGYSKEALDTFRQMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVM 631

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           +H I   MEHY+CMVDL  R+G L E +  I  MP  A  +VWRT LGACRVH + ELGK
Sbjct: 632 DHNISPTMEHYSCMVDLYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVELGK 691

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
            AA+ +L  +P D A ++LLSN+YA+AG W+    +RK M  + + KEAGCSWI+  NKV
Sbjct: 692 LAAQKLLLLEPDDSATYVLLSNIYAAAGRWKERDEVRKLMDSKKVKKEAGCSWIQIKNKV 751

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           H F   + SHP + +IYA+L  +  ++K+ GY P+T+ VLH++ EEQK   L  HSE++A
Sbjct: 752 HSFIACDKSHPLSEQIYAKLKAMTTRLKQEGYCPNTSVVLHDIAEEQKETMLVMHSERLA 811

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           +AFGLI+T    P+++ KNLRVCGDCH  +K +S++  REI++RD +RFHH   G CSC 
Sbjct: 812 LAFGLIATPPRTPLQIVKNLRVCGDCHMVMKMVSLIEDREIIMRDCSRFHHFNAGACSCG 871

Query: 859 DYW 861
           D+W
Sbjct: 872 DFW 874



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 256/487 (52%), Gaps = 18/487 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P+  T++ +L +        LG+ VH+   +        + NSLI++YSKCG 
Sbjct: 192 MRAEGVWPNPFTFTSVLSAVASQGAVDLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGL 251

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EA  +F+ M   RD+VSW+++++  +    Q++A+ +F +        ++  +S VI+
Sbjct: 252 VEEAKAVFRQM-ETRDMVSWNTLMAGLLLNEHQLEALQLFHDSRASMAKLSQSTYSTVIK 310

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKN 247
            C+N + +A+   ++  +LK G F SD  V  A++D + K   +L+ A+ +F  M   +N
Sbjct: 311 LCANLKQLALARQLHSCVLKHG-FHSDGNVMTAIMDAYSKCG-ELDDAFNIFLLMPGSQN 368

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V WT MI  C Q      A  LF  M      P+ FT S V++A   + L     Q+H+
Sbjct: 369 VVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVLTASIPILL----PQIHA 424

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAIITGYVQSG 366
             I+T       VG +L+  Y+K    G+ +++  +F +M+DH +V++W+A+++ Y Q+G
Sbjct: 425 QIIKTNYQHAPSVGTALLASYSKL---GNTEEALSIF-KMIDHKDVVAWSAMLSCYSQAG 480

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--C 424
             D  A  +F  M    + PN FT +S + AC +   + + +    HA+       D  C
Sbjct: 481 DCDG-ATNVFIKMSMQGMKPNEFTISSAIDACAS-PTAGIDQGRQFHAISIKYRYQDAIC 538

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           VG++L++MYAR G ++ AR  FE   +++LVS+N+M+  YA++  S++A +   ++E  G
Sbjct: 539 VGSALVTMYARKGSIDSARIVFERQTDRDLVSWNSMISGYAQHGYSKEALDTFRQMETVG 598

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           +     TF +++ G +  G + +G+Q   + ++          Y+ ++ +YSR   ++  
Sbjct: 599 IEMDGATFLAVIVGCTHAGLVKEGQQYFDSMVMDHNISPTMEHYSCMVDLYSRAGKLDET 658

Query: 544 FQVFKEM 550
             + + M
Sbjct: 659 MNLIEGM 665



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/399 (31%), Positives = 206/399 (51%), Gaps = 26/399 (6%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           +S V+  C  +    SG+QLH   ++ G    +V VG +LVDMY KC   G V+D R VF
Sbjct: 102 VSRVLKVCGLIPDRVSGEQLHCLCVKCGFDRAEVGVGTALVDMYMKC---GGVEDGRVVF 158

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           + M   NV++WT+++TGYVQ G    + + LF  M    V PN FTF SVL A  +    
Sbjct: 159 EGMPKRNVVTWTSLLTGYVQ-GRACSDVMALFFRMRAEGVWPNPFTFTSVLSAVASQGAV 217

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
           ++  +V+  +VK G      V NSLI+MY++ G +E+A+  F  +  +++VS+NT++   
Sbjct: 218 DLGRRVHAQSVKFGCRSTVFVCNSLINMYSKCGLVEEAKAVFRQMETRDMVSWNTLMAGL 277

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
             N +  +A +L H+   +    S  T+++++   +++  +    Q+H+ ++K GF S+ 
Sbjct: 278 LLNEHQLEALQLFHDSRASMAKLSQSTYSTVIKLCANLKQLALARQLHSCVLKHGFHSDG 337

Query: 525 CIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
            +  A++  YS+C  ++ AF +F  M   +NV+SWT+MI G  ++     A  +F +M  
Sbjct: 338 NVMTAIMDAYSKCGELDDAFNIFLLMPGSQNVVSWTAMIGGCIQNADIPLAAALFSRMRE 397

Query: 584 DGIKPNGITYIAVLSAC-------SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           D +KPN  TY  VL+A         HA +I   ++H  S+               ++   
Sbjct: 398 DNVKPNEFTYSTVLTASIPILLPQIHAQIIKTNYQHAPSV------------GTALLASY 445

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            + G+  EAL   + M    DV+ W   L      GD +
Sbjct: 446 SKLGNTEEALSIFK-MIDHKDVVAWSAMLSCYSQAGDCD 483



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 200/401 (49%), Gaps = 25/401 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TYS ++K C   +   L + +HS + +     +  ++ +++  YSKCG+L++A  IF  M
Sbjct: 304 TYSTVIKLCANLKQLALARQLHSCVLKHGFHSDGNVMTAIMDAYSKCGELDDAFNIFLLM 363

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI- 198
              +++VSW++MI   +       A  +F  M E    PNE+ +S V+     T ++ I 
Sbjct: 364 PGSQNVVSWTAMIGGCIQNADIPLAAALFSRMREDNVKPNEFTYSTVL-----TASIPIL 418

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
              I+  ++K  Y  +   VG AL+  + K   + E A  +F  +  K+ V W+ M++  
Sbjct: 419 LPQIHAQIIKTNYQHAP-SVGTALLASYSKLG-NTEEALSIFKMIDHKDVVAWSAMLSCY 476

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC-SELELFTSGKQLHSWAIRTGLALD 317
           +Q G    A  +F+ M + G  P+ FT+S  + AC S       G+Q H+ +I+      
Sbjct: 477 SQAGDCDGATNVFIKMSMQGMKPNEFTISSAIDACASPTAGIDQGRQFHAISIKYRYQDA 536

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           +CVG +LV MYA+    GS+D +R VF+R  D +++SW ++I+GY Q  G  KEA+  F 
Sbjct: 537 ICVGSALVTMYAR---KGSIDSARIVFERQTDRDLVSWNSMISGYAQH-GYSKEALDTFR 592

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS------LIS 431
            M    +  +  TF +V+  C +       +Q +   V     +D  +  +      ++ 
Sbjct: 593 QMETVGIEMDGATFLAVIVGCTHAGLVKEGQQYFDSMV-----MDHNISPTMEHYSCMVD 647

Query: 432 MYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
           +Y+R+G++++     E + F    + + T++ A   + N E
Sbjct: 648 LYSRAGKLDETMNLIEGMPFPAGAMVWRTLLGACRVHKNVE 688


>gi|15242550|ref|NP_196557.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170796|sp|Q9FIB2.1|PP373_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g09950
 gi|9758973|dbj|BAB09416.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332004087|gb|AED91470.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 995

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 302/817 (36%), Positives = 482/817 (58%), Gaps = 18/817 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTY-SLLLKSC-IRSRNFHLGKLVHSLLTRSKLEPNSV 114
           G  + A      M   G+ P   T+ SL+  +C +   +  L + +   + +S L  +  
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + + L+S ++K G L+ A K+F  M   R+ V+ + ++   V +    +A  +F++M  +
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303

Query: 175 -GFCPNEYC-FSAVIRACSNTENVAI--GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
               P  Y    +     S  E V +  G  ++G ++  G  D  V +G  L++M+ K G
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S+    A +VF  MT+K++V W  MIT   Q GC  +A+  +  M     LP  FTL   
Sbjct: 364 SI--ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +S+C+ L+    G+Q+H  +++ G+ L+V V  +L+ +YA+    G +++ RK+F  M +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE---TGYLNECRKIFSSMPE 478

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           H+ +SW +II    +S     EAV  F +  +     N  TF+SVL A  +L    + +Q
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNL 468
           ++  A+K   A +    N+LI+ Y + G M+   K F  + E+ + V++N+M+  Y  N 
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              KA +L+  +  TG    ++ +A++LS  +S+  + +G ++HA  +++  ES+  + +
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IK 587
           AL+ MYS+C  ++ A + F  M  RN  SW SMI+G+A+HG    AL++F  M  DG   
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTP 718

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+ +T++ VLSACSHAGL+ EG+KHF SM D +G+  R+EH++CM D+LGR+G L +  +
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLED 778

Query: 648 FIRSMPLSADVLVWRTFLGAC-RVHG-DTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
           FI  MP+  +VL+WRT LGAC R +G   ELGK AAEM+ + +P++   ++LL N+YA+ 
Sbjct: 779 FIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 838

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G WE +   RK+MK+ ++ KEAG SW+   + VH F  G+ SHP    IY +L +L  K+
Sbjct: 839 GRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLRVCGDC 824
           ++ GY+P T F L++LE+E K + L  HSEK+AVAF L +  S + PIR+ KNLRVCGDC
Sbjct: 899 RDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDC 958

Query: 825 HTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           H+A KYIS + GR+I+LRDSNRFHH +DG CSC+D+W
Sbjct: 959 HSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 156/532 (29%), Positives = 262/532 (49%), Gaps = 42/532 (7%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
            ++SC+  R     +  HS L +++L+ +  + N+LI+ Y + GD   A K+F  M   R
Sbjct: 9   FVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM-PLR 65

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI--GHI 201
           + VSW+ ++S Y   G+  +A+    +M++ G   N+Y F +V+RAC    +V I  G  
Sbjct: 66  NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+G + K  Y   D  V   LI M+ K    +  A   F  +  KN+V W  +I+  +Q 
Sbjct: 126 IHGLMFKLSY-AVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVV-SACS----ELELFTSGKQLHSWAIRTGLAL 316
           G  R A R+F  M   G  P  +T   +V +ACS    ++ L    +Q+     ++GL  
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLL---EQIMCTIQKSGLLT 241

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV-QSGGRDKEAVKL 375
           D+ VG  LV  +AK    GS+  +RKVF++M   N ++   ++ G V Q  G  +EA KL
Sbjct: 242 DLFVGSGLVSAFAK---SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG--EEATKL 296

Query: 376 FSDMIQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV--------- 425
           F DM     V+P  +          +  + ++AE+V    +K+GR +   V         
Sbjct: 297 FMDMNSMIDVSPESYVI-----LLSSFPEYSLAEEV---GLKKGREVHGHVITTGLVDFM 348

Query: 426 ---GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
              GN L++MYA+ G + DAR+ F  + +K+ VS+N+M+    +N    +A E    +  
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             +   ++T  S LS  +S+     G+QIH   +K G + N  + NAL+++Y+    +  
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNE 468

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFA-ARALEIFYKMLADGIKPNGITY 593
             ++F  M + + +SW S+I   A+   +   A+  F      G K N IT+
Sbjct: 469 CRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 11/279 (3%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+LI+ Y  +G    ARK F+ +  +N VS+  +V  Y++N   ++A   L ++   G+ 
Sbjct: 40  NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99

Query: 487 TSAYTFASLLSGASSIGAIGK--GEQIHARIIKSGFESNHCIYNALISMYSRC-ANVEAA 543
           ++ Y F S+L     IG++G   G QIH  + K  +  +  + N LISMY +C  +V  A
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYA 159

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA-VLSACSH 602
              F ++E +N +SW S+I+ +++ G    A  IF  M  DG +P   T+ + V +ACS 
Sbjct: 160 LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSL 219

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
                   +       + G++  +   + +V    +SGSL+ A +    M     V +  
Sbjct: 220 TEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG 279

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQ---DPAAHILL 698
             +G  R     + G+ A ++ ++ +      P ++++L
Sbjct: 280 LMVGLVR----QKWGEEATKLFMDMNSMIDVSPESYVIL 314



 Score = 68.9 bits (167), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 2/142 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++  + KA+  +  M Q G   D   Y+ +L +         G  VH+   R+ LE +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM- 171
            V+ ++L+ +YSKCG L+ A + F +M   R+  SW+SMIS Y   G+  +A+ +F  M 
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTM-PVRNSYSWNSMISGYARHGQGEEALKLFETMK 712

Query: 172 LELGFCPNEYCFSAVIRACSNT 193
           L+    P+   F  V+ ACS+ 
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHA 734



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 57/107 (53%)

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           S +G  G     H+R+ K+  + +  + N LI+ Y    +  +A +VF EM  RN +SW 
Sbjct: 12  SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            +++G++++G    AL     M+ +GI  N   +++VL AC   G +
Sbjct: 72  CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118


>gi|297821407|ref|XP_002878586.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297324425|gb|EFH54845.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 786

 Score =  531 bits (1368), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 276/693 (39%), Positives = 418/693 (60%), Gaps = 64/693 (9%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D++S+ + FD++ ++++V WT MI     +G    AIR+  +M+  G  P +FTL+ V++
Sbjct: 95  DMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLA 154

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--------TVD--------- 334
           + +      +GK++HS+ ++ GL  +V V  SL++MYAKC          D         
Sbjct: 155 SVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISS 214

Query: 335 -----------GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-G 382
                      G +D +   F++M + ++++W ++I+GY Q G  D  A+ +FS M++  
Sbjct: 215 WNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRG-YDLRALDMFSKMLRDS 273

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            ++P+ FT ASVL AC NL    + EQ+++H V  G  +   V N+LISMY+R G +E A
Sbjct: 274 MLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNALISMYSRCGGVETA 333

Query: 443 RK---------------------------------AFESLFEKNLVSYNTMVDAYAKNLN 469
           R+                                  F+SL ++++V++  M+  Y ++  
Sbjct: 334 RRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGL 393

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A  L   +       ++YT A++LS ASS+ ++G G+QIH   +KSG   +  + NA
Sbjct: 394 YGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNA 453

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           LI+MY++  ++ +A + F  +  +R+ +SWTSMI   A+HG A  ALE+F  ML +G++P
Sbjct: 454 LITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGLRP 513

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + ITY+ V SAC+HAGL+++G ++F  M D   I+  + HYACMVDL GR+G L EA EF
Sbjct: 514 DHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQEF 573

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I  MP+  DV+ W + L ACRV+ + +LGK AAE +L  +P++  A+  L+NLY++ G W
Sbjct: 574 IEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPENSGAYSALANLYSACGKW 633

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           E  A IRK MK+  + KE G SWIE  +KVH F V +  HP+  EIY  + ++  +IK+ 
Sbjct: 634 EEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHAFGVEDGIHPQKNEIYITMKKIWDEIKKM 693

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+PDT  VLH+LEEE K Q L  HSEK+A+AFGLIST     +R+ KNLRVC DCHTAI
Sbjct: 694 GYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHTAI 753

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS + GREI++RD+ RFHH KDG CSC DYW
Sbjct: 754 KFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 277/581 (47%), Gaps = 104/581 (17%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM-- 139
           +LL KS  +S      +LVH  + +S L  +  ++N+L+++YSK G    A K+F  M  
Sbjct: 18  NLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77

Query: 140 ----------------GN------------KRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
                           G+            +RD VSW++MI  Y N G+   AI +  EM
Sbjct: 78  RTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEM 137

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK--- 228
           +  G  P+++  + V+ + + T  +  G  ++ F++K G    +V V  +L++M+ K   
Sbjct: 138 MREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGD 196

Query: 229 -----------------------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
                                        G +DL  A   F++M E++ V W  MI+   
Sbjct: 197 PMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQ--FEQMAERDIVTWNSMISGYN 254

Query: 260 QLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           Q G    A+ +F  M+    L PDRFTL+ V+SAC+ LE    G+Q+HS  + TG  +  
Sbjct: 255 QRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISG 314

Query: 319 CVGCSLVDMYAKC--------------TVD----------------GSVDDSRKVFDRML 348
            V  +L+ MY++C              T D                G +++++ +FD + 
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLK 374

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           D +V++WTA+I GY Q G    EA+ LF  M+  +  PN +T A++L    +L      +
Sbjct: 375 DRDVVAWTAMIVGYEQHGLYG-EAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHGK 433

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKN 467
           Q++  AVK G      V N+LI+MYA++G +  A +AF+ +  E++ VS+ +M+ A A++
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQH 493

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ---IHARIIKSGFESNH 524
            ++E+A EL   +   G+     T+  + S  +  G + +G Q   +   + K     +H
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553

Query: 525 CIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
             Y  ++ ++ R   ++ A +  ++M  + +V++W S+++ 
Sbjct: 554 --YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSA 592



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 174/611 (28%), Positives = 265/611 (43%), Gaps = 124/611 (20%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ + N G+  KAI  +  M ++G  P   T + +L S   +R    GK VHS + +  L
Sbjct: 118 IVGYKNIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGL 177

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNK--------------------------- 142
             N  + NSL+++Y+KCGD   A  +F  M  K                           
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQ 237

Query: 143 ---RDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAI 198
              RDIV+W+SMIS Y  RG  + A+ MF +ML +    P+ +  ++V+ AC+N E + I
Sbjct: 238 MAERDIVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCI 297

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV-------------------------- 231
           G  I+  ++  G FD    V  ALI M+ + G V                          
Sbjct: 298 GEQIHSHIVTTG-FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356

Query: 232 -----DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
                D+  A  +FD + +++ V WT MI    Q G   +AI LF  M+     P+ +TL
Sbjct: 357 YIKLGDMNEAKNIFDSLKDRDVVAWTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTL 416

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + ++S  S L     GKQ+H  A+++G    V V  +L+ MYAK    GS+  + + FD 
Sbjct: 417 AAMLSVASSLASLGHGKQIHGSAVKSGEIYSVSVSNALITMYAKA---GSITSASRAFDL 473

Query: 347 M-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           +  + + +SWT++I    Q  G  +EA++LF  M+   + P+H T+  V  AC       
Sbjct: 474 IRCERDTVSWTSMIIALAQH-GHAEEALELFETMLMEGLRPDHITYVGVFSAC------- 525

Query: 406 VAEQVYTHA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
                 THA  V +GR   D               M+D  K   +L       Y  MVD 
Sbjct: 526 ------THAGLVNQGRQYFDM--------------MKDVDKIIPTLSH-----YACMVDL 560

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           + +    ++A E    IE   +     T+ SLLS       I  G+    R++    E N
Sbjct: 561 FGRAGLLQEAQEF---IEKMPIEPDVVTWGSLLSACRVYKNIDLGKVAAERLLLLEPE-N 616

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNV-----ISWTSMITGFAKHGFAARALEIF 578
              Y+AL ++YS C   E A ++ K M+D  V      SW  +     KH   A  +E  
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRVKKEQGFSWIEV-----KHKVHAFGVE-- 669

Query: 579 YKMLADGIKPN 589
                DGI P 
Sbjct: 670 -----DGIHPQ 675



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 113/459 (24%), Positives = 212/459 (46%), Gaps = 72/459 (15%)

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +++  YAK    G +D S + FDR+   + +SWT +I GY ++ G+  +A+++  +M++ 
Sbjct: 85  TVLSAYAK---RGDMDSSCEFFDRLPQRDSVSWTTMIVGY-KNIGQYHKAIRIMGEMMRE 140

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS------ 436
            + P+ FT  +VL +          ++V++  VK G   +  V NSL++MYA+       
Sbjct: 141 GIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMA 200

Query: 437 -------------------------GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
                                    G+M+ A   FE + E+++V++N+M+  Y +     
Sbjct: 201 KVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGYNQRGYDL 260

Query: 472 KAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           +A ++  + + D+ +    +T AS+LS  +++  +  GEQIH+ I+ +GF+ +  + NAL
Sbjct: 261 RALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIHSHIVTTGFDISGIVLNAL 320

Query: 531 ISMYSRCANVEAAFQ---------------------------------VFKEMEDRNVIS 557
           ISMYSRC  VE A +                                 +F  ++DR+V++
Sbjct: 321 ISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNEAKNIFDSLKDRDVVA 380

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           WT+MI G+ +HG    A+ +F  M+ +  +PN  T  A+LS  S    +  G K      
Sbjct: 381 WTAMIVGYEQHGLYGEAINLFRSMVGEEQRPNSYTLAAMLSVASSLASLGHG-KQIHGSA 439

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            + G +  +     ++ +  ++GS+T A      +    D + W + + A   HG  E  
Sbjct: 440 VKSGEIYSVSVSNALITMYAKAGSITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEA 499

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
               E +L +  +    HI    ++++  H   V   R+
Sbjct: 500 LELFETMLMEGLRPD--HITYVGVFSACTHAGLVNQGRQ 536



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/391 (22%), Positives = 173/391 (44%), Gaps = 104/391 (26%)

Query: 385 APNHFTFASVLKACGNLLDSNV--------AEQVYTHAVKRGRALDDCVGNSLISMYARS 436
           AP   + +++L+ C NLL  +V        A+ V+   +K G      + N+L+++Y+++
Sbjct: 3   APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLVFSVYLMNNLMNVYSKT 62

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAK--NLNSE----------------------- 471
           G    ARK F+ +  +   S+NT++ AYAK  +++S                        
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYK 122

Query: 472 ------KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
                 KA  ++ E+   G+  S +T  ++L+  ++   +  G+++H+ I+K G   N  
Sbjct: 123 NIGQYHKAIRIMGEMMREGIEPSQFTLTNVLASVAATRCLETGKKVHSFIVKLGLRGNVS 182

Query: 526 IYNALISMYSRCAN-------------------------------VEAAFQVFKEMEDRN 554
           + N+L++MY++C +                               ++ A   F++M +R+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKVVFDRMVVKDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACS-----------H 602
           +++W SMI+G+ + G+  RAL++F KML D  + P+  T  +VLSAC+           H
Sbjct: 243 IVTWNSMISGYNQRGYDLRALDMFSKMLRDSMLSPDRFTLASVLSACANLEKLCIGEQIH 302

Query: 603 AGLISEGW-------KHFRSMYDEHGIVQ--------------RMEHYACMVDLLGRSGS 641
           + +++ G+           SMY   G V+              ++E +  ++D   + G 
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           + EA     S+    DV+ W   +     HG
Sbjct: 363 MNEAKNIFDSLK-DRDVVAWTAMIVGYEQHG 392



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/162 (21%), Positives = 76/162 (46%), Gaps = 2/162 (1%)

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +N ++S Y++  +++++ + F  +  R+ +SWT+MI G+   G   +A+ I  +M+ +GI
Sbjct: 83  WNTVLSAYAKRGDMDSSCEFFDRLPQRDSVSWTTMIVGYKNIGQYHKAIRIMGEMMREGI 142

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+  T   VL++ +    +  G K   S   + G+   +     ++++  + G    A 
Sbjct: 143 EPSQFTLTNVLASVAATRCLETG-KKVHSFIVKLGLRGNVSVSNSLLNMYAKCGDPMMAK 201

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
                M +  D+  W   +      G  +L     E + E+D
Sbjct: 202 VVFDRMVVK-DISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242


>gi|357519003|ref|XP_003629790.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523812|gb|AET04266.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 908

 Score =  531 bits (1367), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 282/796 (35%), Positives = 465/796 (58%), Gaps = 11/796 (1%)

Query: 66  LDLMTQ-KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
           ++L+T+ K     L++Y  +L+ C   ++   GK VHS++  + +  +  +   L+ +Y 
Sbjct: 81  IELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISVDEALGAKLVFMYV 140

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
            CGDL +  KIF  + N + +  W+ ++S Y   G   +++ +F +M +LG   N Y F+
Sbjct: 141 NCGDLVQGRKIFDKIMNDK-VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 199

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKM 243
            V++  +    V     ++G++LK G F S+  V  +LI  + K G V  ESA+ +FD++
Sbjct: 200 CVLKCFAALGKVKECKRVHGYVLKLG-FGSNTAVVNSLIAAYFKFGGV--ESAHNLFDEL 256

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
           +E + V W  MI  C   G   + + +F+ M++ G   D  TL  V+ AC+ +   + G+
Sbjct: 257 SEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVACANIGNLSLGR 316

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            LH + ++   + +V    +L+DMY+KC   G+++ + +VF +M D  ++SWT+II  YV
Sbjct: 317 ALHGFGVKACFSEEVVFSNTLLDMYSKC---GNLNGATEVFVKMGDTTIVSWTSIIAAYV 373

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           + G    +A+ LF +M    V P+ +T  S++ AC      +    V+++ +K G   + 
Sbjct: 374 REG-LYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 432

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N+LI+MYA+ G +E+AR  F  +  K++VS+NTM+  Y++NL   +A EL  +++  
Sbjct: 433 PVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNLLPNEALELFLDMQKQ 492

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
                  T A +L   + + A+ KG +IH  I++ G+ S+  +  AL+ MY++C  +  A
Sbjct: 493 -FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA 551

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
             +F  +  +++ISWT MI G+  HGF   A+  F +M   GI+P+  ++ A+L+ACSH+
Sbjct: 552 QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSAILNACSHS 611

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL++EGWK F SM +E G+  ++EHYAC+VDLL R G+L++A +FI SMP+  D  +W  
Sbjct: 612 GLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGV 671

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L  CR+H D +L +  AE I E +P +   +++L+N+YA A  WE V  +RKRM++R  
Sbjct: 672 LLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 731

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            +  GCSWIE   K + F  G + HP+  +I   L +L ++++   Y     +VL   ++
Sbjct: 732 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKKIDVLLSKLTMQMQNEDYSSMFRYVLINEDD 791

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
            +K      HSEK A+AFG+++    + +RV KN RVCGDCH   K++S  T  EIVLRD
Sbjct: 792 MEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNRRVCGDCHEMGKFMSKTTKMEIVLRD 851

Query: 844 SNRFHHIKDGKCSCND 859
           SNRFHH KDG CSC D
Sbjct: 852 SNRFHHFKDGLCSCRD 867



 Score =  139 bits (351), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 171/323 (52%), Gaps = 9/323 (2%)

Query: 41  TTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
           TT    ++ +  ++ +G    AI   D M  KG  PD+ T + ++ +C  S +   G+ V
Sbjct: 360 TTIVSWTSIIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 419

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           HS + ++ +  N  + N+LI++Y+KCG + EA  +F  +  K DIVSW++MI  Y     
Sbjct: 420 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNLL 478

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
             +A+ +F++M +  F P++   + V+ AC+    +  G  I+G +L+ GYF SD+ V C
Sbjct: 479 PNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF-SDLHVAC 536

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           AL+DM+ K  + L  A  +FD + +K+ + WT+MI      G   +AI  F +M ++G  
Sbjct: 537 ALVDMYAKCGL-LVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE 595

Query: 281 PDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           PD  + S +++ACS   L   G K  +S     G+   +     +VD+ A+    G++  
Sbjct: 596 PDESSFSAILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM---GNLSK 652

Query: 340 SRKVFDRM-LDHNVMSWTAIITG 361
           + K  + M +  +   W  +++G
Sbjct: 653 AYKFIESMPIKPDTTIWGVLLSG 675


>gi|296083884|emb|CBI24272.3| unnamed protein product [Vitis vinifera]
          Length = 729

 Score =  530 bits (1366), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 275/725 (37%), Positives = 419/725 (57%), Gaps = 54/725 (7%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVKGSVDLESAYKVF 240
           ++++++ C    N+ +G  ++  L+  G    DVC  +G  L++++ +    +E A ++F
Sbjct: 13  YASILQKCRKLYNLRLGFQVHAQLVVNGV---DVCEFLGSRLLEVYCQTGC-VEDARRMF 68

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           DKM+E+N   WT ++     LG   + I+LF  M+  G  PD F    V  ACSEL+ + 
Sbjct: 69  DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYR 128

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            GK ++ + +  G   + CV  S++DM+ KC   G +D +R+ F+ +   +V  W  +++
Sbjct: 129 VGKDVYDYMLSIGFEGNSCVKGSILDMFIKC---GRMDIARRFFEEIEFKDVFMWNIMVS 185

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY  S G  K+A+ +F  M+   V PN  T AS + AC NL       +++ + +K    
Sbjct: 186 GYT-SKGEFKKALNVFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEEL 244

Query: 421 LDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM------------------- 460
             D  VGNSL+  YA+   +E AR+ F  + + +LVS+N M                   
Sbjct: 245 DSDLLVGNSLVDYYAKCRSVEVARRKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFF 304

Query: 461 ------------------------VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
                                   + A A++  S  A +LL E+  + V  +  T  S L
Sbjct: 305 QRMHIACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSAL 364

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              S + A+ +G++IH  II+ G ++ + I N+LI MY RC +++ + ++F  M  R+++
Sbjct: 365 PACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 424

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW  MI+ +  HGF   A+ +F +    G+KPN IT+  +LSACSH+GLI EGWK+F+ M
Sbjct: 425 SWNVMISVYGMHGFGMDAVNLFQQFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 484

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             E+ +   +E YACMVDLL R+G   E LEFI  MP   +  VW + LGACR+H + +L
Sbjct: 485 KTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDL 544

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            ++AA  + E +PQ    ++L++N+Y++AG WE  A IR  MKER + K  GCSWIE   
Sbjct: 545 AEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 604

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           K+H F VG+TSHP   +I A+++ L   IKE GY+PDTNFVL +++E++K   L  HSEK
Sbjct: 605 KLHSFVVGDTSHPLMEQISAKMESLYFDIKEIGYVPDTNFVLQDVDEDEKEFSLCGHSEK 664

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           IA+AFGLIST+   P+R+ KNLRVCGDCH+A K+IS V  R+I++RD+ RFHH  DG CS
Sbjct: 665 IALAFGLISTTAGTPLRIIKNLRVCGDCHSATKFISKVEKRDIIMRDNYRFHHFVDGVCS 724

Query: 857 CNDYW 861
           C DYW
Sbjct: 725 CGDYW 729



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 134/484 (27%), Positives = 230/484 (47%), Gaps = 64/484 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++ I    LM  +G  PD   +  + K+C   +N+ +GK V+  +     E NS + 
Sbjct: 90  GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 149

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            S++ ++ KCG ++ A + F+ +  K D+  W+ M+S Y ++G+   A+++F +M+  G 
Sbjct: 150 GSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALNVFRKMVLEGV 208

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-------- 228
            PN    ++ + AC+N   +  G  I+G+ +K    DSD+ VG +L+D + K        
Sbjct: 209 KPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCRSVEVAR 268

Query: 229 ----------------------------GSVDLES------AYKVFDKMTEKNTVGWTLM 254
                                       G   LE       A  VF +++ ++ V W  +
Sbjct: 269 RKFGMIKQTDLVSWNAMLAVTGFTQYGDGKAALEFFQRMHIACSVFSELSTRDVVVWNSI 328

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+ C Q G   +A+ L  +M LS    +  T+   + ACS+L     GK++H + IR G 
Sbjct: 329 ISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG- 387

Query: 315 ALDVC--VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-GRDKE 371
            LD C  +  SL+DMY +C   GS+  SR++FD M   +++SW  +I+ Y   G G D  
Sbjct: 388 -LDTCNFILNSLIDMYGRC---GSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMD-- 441

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRALDDCVGN-- 427
           AV LF       + PNH TF ++L AC +   S + E+   Y   +K   A+D  V    
Sbjct: 442 AVNLFQQFRTMGLKPNHITFTNLLSACSH---SGLIEEGWKYFKMMKTEYAMDPAVEQYA 498

Query: 428 SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAFELLHEIEDT 483
            ++ + +R+G+  +  +  E + FE N   + +++ A   + N   +E A   L E+E  
Sbjct: 499 CMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFELEPQ 558

Query: 484 GVGT 487
             G 
Sbjct: 559 SSGN 562


>gi|297850056|ref|XP_002892909.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297338751|gb|EFH69168.1| hypothetical protein ARALYDRAFT_889039 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1038

 Score =  530 bits (1365), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 277/815 (33%), Positives = 475/815 (58%), Gaps = 12/815 (1%)

Query: 50   LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
            ++ + + G  ++ I     M  +G   + ++ SL++ SC   ++  LG+ +   + +S L
Sbjct: 233  MVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGL 292

Query: 110  EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            E    + NSLIS++   G+++ AN IF  + ++RD +SW+S++++Y   G   ++  +F 
Sbjct: 293  ESKLAVENSLISMFGNMGNVDYANYIFNQI-SERDTISWNSIVAAYAQNGHIEESSRIFN 351

Query: 170  EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
             M       N    S ++    + ++   G  I+G ++K G FDS VCV   L+ M+  G
Sbjct: 352  LMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIHGLVVKMG-FDSVVCVCNTLLRMYA-G 409

Query: 230  SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            +   E A  VF +M  K+ + W  ++      G   DA+ +   MI +G   +  T +  
Sbjct: 410  AGRSEEADLVFKQMPTKDLISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSA 469

Query: 290  VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
            ++AC   E F  G+ LH   + +GL  +  +G +LV MY K    G +  SR+V  +M  
Sbjct: 470  LAACFSPEFFDKGRILHGLVVVSGLFDNQIIGNALVSMYGKI---GGMSTSRRVLLQMPR 526

Query: 350  HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNV 406
             +V++W A+I GY ++   DK A+  F  +    V+ N+ T  SVL AC   G+LL+   
Sbjct: 527  RDVVAWNALIGGYAENEDPDK-ALAAFQTLRVEGVSANYITVVSVLSACLVPGDLLER-- 583

Query: 407  AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             + ++ + V  G   D+ V NSLI+MYA+ G +  ++  F  L  ++++++N ++ A A 
Sbjct: 584  GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRSIITWNAILAANAH 643

Query: 467  NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
            + + E+  +L+ ++   G+    ++F+  LS A+ +  + +G+Q+H   +K GFE +  I
Sbjct: 644  HGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFELDCFI 703

Query: 527  YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            +NA   MYS+C  +    ++     +R++ SW  +I+   +HG+     E F++ML  GI
Sbjct: 704  FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCETFHEMLEMGI 763

Query: 587  KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
            KP  +T++++L+ACSH GL+ +G  ++  +  + G+   +EH  C++DLLGRSG L EA 
Sbjct: 764  KPGHVTFVSLLTACSHGGLVDQGLAYYDMIAKDFGLEPAIEHCICVIDLLGRSGRLAEAE 823

Query: 647  EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
             FI  MP+  + LVWR+ L +C++H D + G+ AAE + + +P+D +  +L SN++A+ G
Sbjct: 824  TFISKMPMKPNDLVWRSLLASCKIHRDLDRGRKAAENLSKLEPEDDSVFVLSSNMFATTG 883

Query: 707  HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
             WE V N+RK+M  +N+ K+  CSW++  +KV  F +G+ +HP+T+EIYA+L+ +   IK
Sbjct: 884  RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 943

Query: 767  EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
            E GY+ DT+  L + +EEQK   L+ HSE++A+A+ L+ST +   +R+FKNLR+C DCH+
Sbjct: 944  ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 1003

Query: 827  AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              K++S V GR IVLRD  RFHH + G CSC DYW
Sbjct: 1004 VYKFVSRVIGRRIVLRDQYRFHHFESGLCSCKDYW 1038



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 301/581 (51%), Gaps = 11/581 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ +H+L  +  +  + +  N+LI++Y+K G +  A  +F  M   R+ VSW++M+S  V
Sbjct: 77  GRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKM-PVRNEVSWNTMMSGIV 135

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV-AIGHIIYGFLLKCGYFDSD 215
             G  ++ +  F +M +LG  P+ +  ++++ AC  + ++   G  ++GF+ K G   SD
Sbjct: 136 RVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL-SD 194

Query: 216 VCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V V  A++ ++ V G V    + KVF++M ++N V WT ++   +  G P + I ++  M
Sbjct: 195 VYVSTAILHLYGVYGLVS--CSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKSM 252

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
              G   +  ++S V+S+C  L+  + G+Q+    I++GL   + V  SL+ M+      
Sbjct: 253 RGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSLISMFGNM--- 309

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G+VD +  +F+++ + + +SW +I+  Y Q+ G  +E+ ++F+ M +     N  T +++
Sbjct: 310 GNVDYANYIFNQISERDTISWNSIVAAYAQN-GHIEESSRIFNLMRRFHDEVNSTTVSTL 368

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L   G++        ++   VK G     CV N+L+ MYA +GR E+A   F+ +  K+L
Sbjct: 369 LSVLGDVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEEADLVFKQMPTKDL 428

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +S+N+++ ++  +  S  A  +L  +  TG   +  TF S L+   S     KG  +H  
Sbjct: 429 ISWNSLMASFVNDGRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGL 488

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           ++ SG   N  I NAL+SMY +   +  + +V  +M  R+V++W ++I G+A++    +A
Sbjct: 489 VVVSGLFDNQIIGNALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKA 548

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L  F  +  +G+  N IT ++VLSAC   G + E  K   +     G          ++ 
Sbjct: 549 LAAFQTLRVEGVSANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 608

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           +  + G L+ + +    +  +  ++ W   L A   HG  E
Sbjct: 609 MYAKCGDLSSSQDLFNGLD-NRSIITWNAILAANAHHGHGE 648



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 157/612 (25%), Positives = 312/612 (50%), Gaps = 23/612 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRN-FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M   G  P     + L+ +C RS + F  G  VH  + +S L  +  +  +++ LY   G
Sbjct: 150 MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 209

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            ++ + K+F+ M + R++VSW+S++  Y ++G+  + I ++  M   G   NE   S VI
Sbjct: 210 LVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKSMRGEGVECNENSMSLVI 268

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEK 246
            +C   ++ ++G  I G ++K G  +S + V  +LI MF   G+VD   A  +F++++E+
Sbjct: 269 SSCGLLKDESLGRQIIGQVIKSG-LESKLAVENSLISMFGNMGNVDY--ANYIFNQISER 325

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           +T+ W  ++    Q G   ++ R+F  M       +  T+S ++S   +++    G+ +H
Sbjct: 326 DTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNSTTVSTLLSVLGDVDHQKWGRGIH 385

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
              ++ G    VCV  +L+ MYA     G  +++  VF +M   +++SW +++  +V   
Sbjct: 386 GLVVKMGFDSVVCVCNTLLRMYAGA---GRSEEADLVFKQMPTKDLISWNSLMASFVND- 441

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           GR  +A+ +   MI+   + N+ TF S L AC +    +    ++   V  G   +  +G
Sbjct: 442 GRSLDALGILCSMIRTGKSVNYVTFTSALAACFSPEFFDKGRILHGLVVVSGLFDNQIIG 501

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+L+SMY + G M  +R+    +  +++V++N ++  YA+N + +KA      +   GV 
Sbjct: 502 NALVSMYGKIGGMSTSRRVLLQMPRRDVVAWNALIGGYAENEDPDKALAAFQTLRVEGVS 561

Query: 487 TSAYTFASLLSGASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
            +  T  S+LS     G  + +G+ +HA I+ +GFES+  + N+LI+MY++C ++ ++  
Sbjct: 562 ANYITVVSVLSACLVPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 621

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F  +++R++I+W +++   A HG     L++  KM + G+  +  ++   LSA +   +
Sbjct: 622 LFNGLDNRSIITWNAILAANAHHGHGEEVLKLVSKMRSFGLSLDQFSFSEGLSAAAKLAV 681

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI-----RSMPLSADVLV 660
           + EG +    +  + G       +    D+  + G + E ++ +     RS+P       
Sbjct: 682 LEEG-QQLHGLAVKLGFELDCFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP------S 734

Query: 661 WRTFLGACRVHG 672
           W   + A   HG
Sbjct: 735 WNILISALGRHG 746



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 187/383 (48%), Gaps = 23/383 (6%)

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S++   T+G+ LH+  ++  + L V    +L++MY K    G V  +R +FD+M   N +
Sbjct: 69  SQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKF---GRVKPARYLFDKMPVRNEV 125

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG---NLLDSNVAEQV 410
           SW  +++G V+ G    E ++ F  M    + P+ F  AS++ ACG   ++    V  QV
Sbjct: 126 SWNTMMSGIVRVG-LYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGV--QV 182

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +    K G   D  V  +++ +Y   G +  +RK FE + ++N+VS+ +++  Y+     
Sbjct: 183 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 242

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E+  ++   +   GV  +  + + ++S    +     G QI  ++IKSG ES   + N+L
Sbjct: 243 EEVIDIYKSMRGEGVECNENSMSLVISSCGLLKDESLGRQIIGQVIKSGLESKLAVENSL 302

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           ISM+    NV+ A  +F ++ +R+ ISW S++  +A++G    +  IF  M     + N 
Sbjct: 303 ISMFGNMGNVDYANYIFNQISERDTISWNSIVAAYAQNGHIEESSRIFNLMRRFHDEVNS 362

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM--EHYACMVDLLGR----SGSLTE 644
            T   +LS             H +     HG+V +M  +   C+ + L R    +G   E
Sbjct: 363 TTVSTLLSVLGDV-------DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSEE 415

Query: 645 ALEFIRSMPLSADVLVWRTFLGA 667
           A    + MP + D++ W + + +
Sbjct: 416 ADLVFKQMP-TKDLISWNSLMAS 437



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           +G S I     G  +HA  +K     +    N LI+MY++   V+ A  +F +M  RN +
Sbjct: 66  TGFSQITRETTGRALHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARYLFDKMPVRNEV 125

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW +M++G  + G     +E F KM   GIKP+     ++++AC  +G +          
Sbjct: 126 SWNTMMSGIVRVGLYLEGMEFFQKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGF 185

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
             + G++  +     ++ L G  G ++ + +    MP   +V+ W + +      G+ E
Sbjct: 186 VAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYSDKGEPE 243


>gi|297798510|ref|XP_002867139.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
 gi|297312975|gb|EFH43398.1| EMB2758 [Arabidopsis lyrata subsp. lyrata]
          Length = 824

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 301/797 (37%), Positives = 462/797 (57%), Gaps = 24/797 (3%)

Query: 71  QKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
           + GN   ++D    L + C    N    K +H+ L  S    N  I   L++LY   G++
Sbjct: 46  KNGNESKEIDDVHTLFRYCT---NLQSAKCLHARLVVSNAIQNVCISAKLVNLYCYLGNV 102

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF-VEMLELGFCPNEYCFSAVIR 188
             A   F  + N RD+ +W+ MIS Y   G   + I  F + ML  G  P+   F +V++
Sbjct: 103 ALARYTFDHIHN-RDVYAWNLMISGYGRAGYSSEVIRCFSLFMLSSGLQPDYRTFPSVLK 161

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           AC    NV  G+ I+   LK G F  DV V  +LI ++ + G+V   +A  +FD+M  ++
Sbjct: 162 AC---RNVTDGNKIHCLALKFG-FMWDVYVAASLIHLYCRYGAV--VNARILFDEMPTRD 215

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
              W  MI+   Q G  ++A+ L  D + +    D  T+  ++SAC+E   F  G  +HS
Sbjct: 216 MGSWNAMISGYCQSGNAKEALTLS-DGLRA---MDSVTVVSLLSACTEAGDFNRGVTIHS 271

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           ++I+ GL  ++ V   L+D+YA+    GS+ D +KVFDRM   +++SW +II  Y +   
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEF---GSLKDCQKVFDRMYVRDLISWNSIIKAY-ELNE 327

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-CVG 426
           +   A+ LF +M   ++ P+  T  S+      L +      V    +++G  L+D  +G
Sbjct: 328 QPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQGFTLRKGWFLEDITIG 387

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+++ MYA+ G ++ AR  F  L  K+++S+NT++  YA+N  + +A E+ + +E+ G  
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNKDVISWNTIISGYAQNGFASEAIEMYNIMEEEGGE 447

Query: 487 TSAY--TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
            SA   T+ S+L   S  GA+ +G ++H R++K+G   +  +  +L  MY +C  ++ A 
Sbjct: 448 ISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVGTSLADMYGKCGRLDDAL 507

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            +F ++   N + W ++I     HG   +A+ +F +ML +G+KP+ IT++ +LSACSH+G
Sbjct: 508 SLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSG 567

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+ EG   F  M  ++GI   ++HY CMVDL GR+G L  AL FI+SMPL  D  +W   
Sbjct: 568 LVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGAL 627

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           L ACRVHG+ +LGK A+E + E +P+    H+LLSN+YASAG WE V  IR     + L 
Sbjct: 628 LSACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSITSGKGLR 687

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           K  G S +E DNKV  F+ G  +HP   E+Y EL  L  K+K  GY+PD  FVL ++E++
Sbjct: 688 KTPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALHEKLKMVGYVPDHRFVLQDVEDD 747

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           +K   L  HSE++A+AF LI+T     IR+FKNLRVCGDCH+  K+IS +T REI++RDS
Sbjct: 748 EKEHILMSHSERLAMAFALITTPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDS 807

Query: 845 NRFHHIKDGKCSCNDYW 861
           NRFHH K+G CSC DYW
Sbjct: 808 NRFHHFKNGVCSCGDYW 824



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 163/564 (28%), Positives = 270/564 (47%), Gaps = 29/564 (5%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
            M   G  PD  T+  +LK+C   RN   G  +H L  +     +  +  SLI LY + G
Sbjct: 143 FMLSSGLQPDYRTFPSVLKAC---RNVTDGNKIHCLALKFGFMWDVYVAASLIHLYCRYG 199

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            +  A  +F  M   RD+ SW++MIS Y   G   +A+ +   +  +    +     +++
Sbjct: 200 AVVNARILFDEMPT-RDMGSWNAMISGYCQSGNAKEALTLSDGLRAM----DSVTVVSLL 254

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEK 246
            AC+   +   G  I+ + +K G  +S++ V   LID++ + GS  L+   KVFD+M  +
Sbjct: 255 SACTEAGDFNRGVTIHSYSIKHG-LESELFVSNKLIDLYAEFGS--LKDCQKVFDRMYVR 311

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + + W  +I        P  AI LF +M LS   PD  TL  + S  S+L    + + + 
Sbjct: 312 DLISWNSIIKAYELNEQPLRAILLFQEMRLSRIQPDCLTLISLASILSQLGEIRACRSVQ 371

Query: 307 SWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
            + +R G  L D+ +G ++V MYAK    G VD +R VF+ + + +V+SW  II+GY Q+
Sbjct: 372 GFTLRKGWFLEDITIGNAVVVMYAKL---GLVDSARAVFNWLPNKDVISWNTIISGYAQN 428

Query: 366 GGRDKEAVKLFSDMIQ--GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            G   EA+++++ M +  G+++ N  T+ SVL AC          +++   +K G  LD 
Sbjct: 429 -GFASEAIEMYNIMEEEGGEISANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDV 487

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            VG SL  MY + GR++DA   F  +   N V +NT++  +  + + EKA  L  E+ D 
Sbjct: 488 FVGTSLADMYGKCGRLDDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDE 547

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALISMYSRCANVEA 542
           GV     TF +LLS  S  G + +GE     +    G   +   Y  ++ +Y R   +E 
Sbjct: 548 GVKPDHITFVTLLSACSHSGLVDEGEWCFEMMQTDYGITPSLKHYGCMVDLYGRAGQLEI 607

Query: 543 AFQVFKEMEDRNVIS-WTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAVLS 598
           A    K M  +   S W ++++    HG       A E  ++     ++P  + Y  +LS
Sbjct: 608 ALNFIKSMPLQPDASIWGALLSACRVHGNVDLGKIASEHLFE-----VEPEHVGYHVLLS 662

Query: 599 ACSHAGLISEGWKHFRSMYDEHGI 622
               +    EG    RS+    G+
Sbjct: 663 NMYASAGKWEGVDEIRSITSGKGL 686



 Score = 40.0 bits (92), Expect = 5.0,   Method: Compositional matrix adjust.
 Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 1/115 (0%)

Query: 41  TTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
             S P +  +  H   G  +KA+     M  +G  PD  T+  LL +C  S     G+  
Sbjct: 516 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGEWC 575

Query: 101 HSLL-TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             ++ T   + P+      ++ LY + G L  A    KSM  + D   W +++S+
Sbjct: 576 FEMMQTDYGITPSLKHYGCMVDLYGRAGQLEIALNFIKSMPLQPDASIWGALLSA 630


>gi|4966374|gb|AAD34705.1|AC006341_33 >F3O9.28 [Arabidopsis thaliana]
          Length = 1027

 Score =  530 bits (1364), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 273/769 (35%), Positives = 451/769 (58%), Gaps = 12/769 (1%)

Query: 96   LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            LG+ +   + +S LE    + NSLIS+    G+++ AN IF  M ++RD +SW+S+ ++Y
Sbjct: 268  LGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQM-SERDTISWNSIAAAY 326

Query: 156  VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
               G   ++  +F  M       N    S ++    + ++   G  I+G ++K G FDS 
Sbjct: 327  AQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG-FDSV 385

Query: 216  VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            VCV   L+ M+      +E A  VF +M  K+ + W  ++      G   DA+ L   MI
Sbjct: 386  VCVCNTLLRMYAGAGRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMI 444

Query: 276  LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
             SG   +  T +  ++AC   + F  G+ LH   + +GL  +  +G +LV MY K    G
Sbjct: 445  SSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI---G 501

Query: 336  SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
             + +SR+V  +M   +V++W A+I GY +    DK A+  F  M    V+ N+ T  SVL
Sbjct: 502  EMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDK-ALAAFQTMRVEGVSSNYITVVSVL 560

Query: 396  KAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
             AC   G+LL+    + ++ + V  G   D+ V NSLI+MYA+ G +  ++  F  L  +
Sbjct: 561  SACLLPGDLLER--GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNR 618

Query: 453  NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
            N++++N M+ A A + + E+  +L+ ++   GV    ++F+  LS A+ +  + +G+Q+H
Sbjct: 619  NIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLH 678

Query: 513  ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
               +K GFE +  I+NA   MYS+C  +    ++     +R++ SW  +I+   +HG+  
Sbjct: 679  GLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFE 738

Query: 573  RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
                 F++ML  GIKP  +T++++L+ACSH GL+ +G  ++  +  + G+   +EH  C+
Sbjct: 739  EVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICV 798

Query: 633  VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
            +DLLGRSG L EA  FI  MP+  + LVWR+ L +C++HG+ + G+ AAE + + +P+D 
Sbjct: 799  IDLLGRSGRLAEAETFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDD 858

Query: 693  AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
            + ++L SN++A+ G WE V N+RK+M  +N+ K+  CSW++  +KV  F +G+ +HP+T+
Sbjct: 859  SVYVLSSNMFATTGRWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTM 918

Query: 753  EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
            EIYA+L+ +   IKE GY+ DT+  L + +EEQK   L+ HSE++A+A+ L+ST +   +
Sbjct: 919  EIYAKLEDIKKLIKESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTV 978

Query: 813  RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            R+FKNLR+C DCH+  K++S V GR IVLRD  RFHH + G CSC DYW
Sbjct: 979  RIFKNLRICSDCHSVYKFVSRVIGRRIVLRDQYRFHHFERGLCSCKDYW 1027



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 155/581 (26%), Positives = 286/581 (49%), Gaps = 36/581 (6%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ VH+L  +  +  + +  N+LI++Y+K G +  A  +F  M   R+ VSW++M+S  V
Sbjct: 91  GRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIM-PVRNEVSWNTMMSGIV 149

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV-AIGHIIYGFLLKCGYFDSD 215
             G  ++ +  F +M +LG  P+ +  ++++ AC  + ++   G  ++GF+ K G   SD
Sbjct: 150 RVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLL-SD 208

Query: 216 VCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V V  A++ ++ V G V    + KVF++M ++N V WT ++   +  G P + I ++ D 
Sbjct: 209 VYVSTAILHLYGVYGLV--SCSRKVFEEMPDRNVVSWTSLMVGYSDKGEPEEVIDIYKDE 266

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            L                         G+Q+    +++GL   + V  SL+ M       
Sbjct: 267 SL-------------------------GRQIIGQVVKSGLESKLAVENSLISMLGSM--- 298

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G+VD +  +FD+M + + +SW +I   Y Q+ G  +E+ ++FS M +     N  T +++
Sbjct: 299 GNVDYANYIFDQMSERDTISWNSIAAAYAQN-GHIEESFRIFSLMRRFHDEVNSTTVSTL 357

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L   G++        ++   VK G     CV N+L+ MYA +GR  +A   F+ +  K+L
Sbjct: 358 LSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVEANLVFKQMPTKDL 417

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +S+N+++ ++  +  S  A  LL  +  +G   +  TF S L+   +     KG  +H  
Sbjct: 418 ISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGL 477

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           ++ SG   N  I NAL+SMY +   +  + +V  +M  R+V++W ++I G+A+     +A
Sbjct: 478 VVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKA 537

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L  F  M  +G+  N IT ++VLSAC   G + E  K   +     G          ++ 
Sbjct: 538 LAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLIT 597

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           +  + G L+ + +    +  + +++ W   L A   HG  E
Sbjct: 598 MYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 637



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 154/618 (24%), Positives = 304/618 (49%), Gaps = 60/618 (9%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRN-FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M   G  P     + L+ +C RS + F  G  VH  + +S L  +  +  +++ LY   G
Sbjct: 164 MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 223

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            ++ + K+F+ M + R++VSW+S++  Y ++G+  + I ++                   
Sbjct: 224 LVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIY------------------- 263

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEK 246
                 ++ ++G  I G ++K G  +S + V  +LI M   GS+ +++ A  +FD+M+E+
Sbjct: 264 ------KDESLGRQIIGQVVKSG-LESKLAVENSLISML--GSMGNVDYANYIFDQMSER 314

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           +T+ W  +     Q G   ++ R+F  M       +  T+S ++S    ++    G+ +H
Sbjct: 315 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 374

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
              ++ G    VCV  +L+ MYA     G   ++  VF +M   +++SW +++  +V   
Sbjct: 375 GLVVKMGFDSVVCVCNTLLRMYAGA---GRSVEANLVFKQMPTKDLISWNSLMASFVND- 430

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           GR  +A+ L   MI    + N+ TF S L AC           ++   V  G   +  +G
Sbjct: 431 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 490

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+L+SMY + G M ++R+    +  +++V++N ++  YA++ + +KA      +   GV 
Sbjct: 491 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 550

Query: 487 TSAYTFASLLSGASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
           ++  T  S+LS     G  + +G+ +HA I+ +GFES+  + N+LI+MY++C ++ ++  
Sbjct: 551 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 610

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F  +++RN+I+W +M+   A HG     L++  KM + G+  +  ++   LSA +   +
Sbjct: 611 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 670

Query: 606 ISEGWKHFRSMYDEHGIVQRM--EH----YACMVDLLGRSGSLTEALEFI-----RSMPL 654
           + EG +        HG+  ++  EH    +    D+  + G + E ++ +     RS+P 
Sbjct: 671 LEEGQQL-------HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP- 722

Query: 655 SADVLVWRTFLGACRVHG 672
                 W   + A   HG
Sbjct: 723 -----SWNILISALGRHG 735



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 110/394 (27%), Positives = 197/394 (50%), Gaps = 15/394 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +NDGR   A+  L  M   G   +  T++  L +C     F  G+++H L+  S L  N 
Sbjct: 428 VNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQ 487

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           +I N+L+S+Y K G+++E+ ++   M  +RD+V+W+++I  Y        A+  F  M  
Sbjct: 488 IIGNALVSMYGKIGEMSESRRVLLQM-PRRDVVAWNALIGGYAEDEDPDKALAAFQTMRV 546

Query: 174 LGFCPNEYCFSAVIRACSNTEN-VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            G   N     +V+ AC    + +  G  ++ +++  G F+SD  V  +LI M+ K   D
Sbjct: 547 EGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSAG-FESDEHVKNSLITMYAKCG-D 604

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L S+  +F+ +  +N + W  M+      G   + ++L   M   G   D+F+ S  +SA
Sbjct: 605 LSSSQDLFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSA 664

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            ++L +   G+QLH  A++ G   D  +  +  DMY+KC   G + +  K+    ++ ++
Sbjct: 665 AAKLAVLEEGQQLHGLAVKLGFEHDSFIFNAAADMYSKC---GEIGEVVKMLPPSVNRSL 721

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQV 410
            SW  +I+  +   G  +E    F +M++  + P H TF S+L AC  G L+D  +A   
Sbjct: 722 PSWNILISA-LGRHGYFEEVCATFHEMLEMGIKPGHVTFVSLLTACSHGGLVDKGLA--- 777

Query: 411 YTHAVKRGRALDDCVGNSL--ISMYARSGRMEDA 442
           Y   + R   L+  + + +  I +  RSGR+ +A
Sbjct: 778 YYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEA 811



 Score =  129 bits (323), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 101/383 (26%), Positives = 179/383 (46%), Gaps = 48/383 (12%)

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S++ + T+G+ +H+  ++  + L V    +L++MY K    G V  +R +FD M   N +
Sbjct: 83  SQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKF---GRVKPARHLFDIMPVRNEV 139

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQV 410
           SW  +++G V+  G   E ++ F  M    + P+ F  AS++ AC   G++    V  QV
Sbjct: 140 SWNTMMSGIVRV-GLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGV--QV 196

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +    K G   D  V  +++ +Y   G +  +RK FE + ++N+VS+ +++  Y+     
Sbjct: 197 HGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMPDRNVVSWTSLMVGYSDKGEP 256

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E+  ++             Y   SL            G QI  +++KSG ES   + N+L
Sbjct: 257 EEVIDI-------------YKDESL------------GRQIIGQVVKSGLESKLAVENSL 291

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           ISM     NV+ A  +F +M +R+ ISW S+   +A++G    +  IF  M     + N 
Sbjct: 292 ISMLGSMGNVDYANYIFDQMSERDTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNS 351

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM--EHYACMVDLLGR----SGSLTE 644
            T   +LS   H         H +     HG+V +M  +   C+ + L R    +G   E
Sbjct: 352 TTVSTLLSVLGHV-------DHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSVE 404

Query: 645 ALEFIRSMPLSADVLVWRTFLGA 667
           A    + MP + D++ W + + +
Sbjct: 405 ANLVFKQMP-TKDLISWNSLMAS 426



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 103/238 (43%), Gaps = 12/238 (5%)

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
           G S I     G  +HA  +K     +    N LI+MY++   V+ A  +F  M  RN +S
Sbjct: 81  GFSQITIETTGRAVHALCVKGLVRLSVLHTNTLINMYTKFGRVKPARHLFDIMPVRNEVS 140

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W +M++G  + G     +E F KM   GIKP+     ++++AC  +G +           
Sbjct: 141 WNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFV 200

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL----------GA 667
            + G++  +     ++ L G  G ++ + +    MP   +V+ W + +            
Sbjct: 201 AKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYSDKGEPEEV 259

Query: 668 CRVHGDTELGKHAAEMILEQDPQDP-AAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
             ++ D  LG+     +++   +   A    L ++  S G+ +Y   I  +M ER+ I
Sbjct: 260 IDIYKDESLGRQIIGQVVKSGLESKLAVENSLISMLGSMGNVDYANYIFDQMSERDTI 317


>gi|18418348|ref|NP_567948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635622|sp|O81767.2|PP348_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g33990; AltName: Full=Protein EMBRYO DEFECTIVE 2758
 gi|332660906|gb|AEE86306.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 823

 Score =  529 bits (1363), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 295/796 (37%), Positives = 457/796 (57%), Gaps = 23/796 (2%)

Query: 71  QKGNH-PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
           + GN   ++D    L + C    N    K +H+ L  SK   N  I   L++LY   G++
Sbjct: 46  KNGNESKEIDDVHTLFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNV 102

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF-VEMLELGFCPNEYCFSAVIR 188
             A   F  + N RD+ +W+ MIS Y   G   + I  F + ML  G  P+   F +V++
Sbjct: 103 ALARHTFDHIQN-RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 161

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC     V  G+ I+   LK G F  DV V  +LI ++ +    + +A  +FD+M  ++ 
Sbjct: 162 AC---RTVIDGNKIHCLALKFG-FMWDVYVAASLIHLYSRYKA-VGNARILFDEMPVRDM 216

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHS 307
             W  MI+   Q G  ++A+ L      +G    D  T+  ++SAC+E   F  G  +HS
Sbjct: 217 GSWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHS 271

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           ++I+ GL  ++ V   L+D+YA+    G + D +KVFDRM   +++SW +II  Y +   
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEF---GRLRDCQKVFDRMYVRDLISWNSIIKAY-ELNE 327

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-CVG 426
           +   A+ LF +M   ++ P+  T  S+      L D      V    +++G  L+D  +G
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-V 485
           N+++ MYA+ G ++ AR  F  L   +++S+NT++  YA+N  + +A E+ + +E+ G +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             +  T+ S+L   S  GA+ +G ++H R++K+G   +  +  +L  MY +C  +E A  
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F ++   N + W ++I     HG   +A+ +F +ML +G+KP+ IT++ +LSACSH+GL
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + EG   F  M  ++GI   ++HY CMVD+ GR+G L  AL+FI+SM L  D  +W   L
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
            ACRVHG+ +LGK A+E + E +P+    H+LLSN+YASAG WE V  IR     + L K
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
             G S +E DNKV  F+ G  +HP   E+Y EL  L  K+K  GY+PD  FVL ++E+++
Sbjct: 688 TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDE 747

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           K   L  HSE++A+AF LI+T     IR+FKNLRVCGDCH+  K+IS +T REI++RDSN
Sbjct: 748 KEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSN 807

Query: 846 RFHHIKDGKCSCNDYW 861
           RFHH K+G CSC DYW
Sbjct: 808 RFHHFKNGVCSCGDYW 823



 Score = 42.7 bits (99), Expect = 0.82,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 8/143 (5%)

Query: 41  TTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
             S P +  +  H   G  +KA+     M  +G  PD  T+  LL +C  S     G+  
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574

Query: 101 HSLL-TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS----- 154
             ++ T   + P+      ++ +Y + G L  A K  KSM  + D   W +++S+     
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634

Query: 155 YVNRGKQVDAIHMF-VEMLELGF 176
            V+ GK + + H+F VE   +G+
Sbjct: 635 NVDLGK-IASEHLFEVEPEHVGY 656


>gi|357504267|ref|XP_003622422.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355497437|gb|AES78640.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 952

 Score =  529 bits (1362), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 289/844 (34%), Positives = 463/844 (54%), Gaps = 42/844 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N G  Q+ +     M       +  T S +L  C   ++   GK +H  + R  +  +
Sbjct: 116 YVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVED 175

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + ++ ++ Y+KC  + EA  +F  M + RD+V+W+S+ S YVN G     +++F EM+
Sbjct: 176 VFVSSAFVNFYAKCLCVREAQTVFDLMPH-RDVVTWNSLSSCYVNCGFPQKGLNVFREMV 234

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+    S ++ ACS+ +++  G  I+GF LK G  + +V V  AL++++ +  + 
Sbjct: 235 LDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALKHGMVE-NVFVSNALVNLY-ESCLC 292

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A  VFD M  +N + W  + +     G P+  + +F +M L+G  PD   +S ++ A
Sbjct: 293 VREAQAVFDLMPHRNVITWNSLASCYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPA 352

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS+L+   SGK +H +A++ G+  DV V  +LV++YA C     V +++ VFD M   NV
Sbjct: 353 CSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVNLYANCL---CVREAQTVFDLMPHRNV 409

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W ++ + YV  G   K  + +F +M+   V P+  T  S+L AC +L D    + ++ 
Sbjct: 410 VTWNSLSSCYVNCGFPQK-GLNVFREMVLNGVKPDLVTMLSILHACSDLQDLKSGKVIHG 468

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY-------- 464
            AV+ G   D  V N+L+S+YA+   + +A+  F+ +  + + S+N ++ AY        
Sbjct: 469 FAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIPHREVASWNGILTAYFTNKEYEK 528

Query: 465 ---------------------------AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
                                       KN   E+A E+  +++  G      T  S+L 
Sbjct: 529 GLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAMEIFRKMQTMGFKPDETTIYSILR 588

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             S    +  G++IH  + +   + +    NAL+ MY++C  +  +  VF  M  ++V S
Sbjct: 589 ACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYAKCGGLSLSRNVFDMMPIKDVFS 648

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W +MI     HG    AL +F KML   +KP+  T+  VLSACSH+ L+ EG + F SM 
Sbjct: 649 WNTMIFANGMHGNGKEALSLFEKMLLSMVKPDSATFTCVLSACSHSMLVEEGVQIFNSMS 708

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            +H +    EHY C+VD+  R+G L EA  FI+ MP+    + W+ FL  CRV+ + EL 
Sbjct: 709 RDHLVEPEAEHYTCVVDIYSRAGCLEEAYGFIQRMPMEPTAIAWKAFLAGCRVYKNVELA 768

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           K +A+ + E DP   A ++ L N+  +A  W   + IRK MKER + K  GCSW    N+
Sbjct: 769 KISAKKLFEIDPNGSANYVTLFNILVTAKLWSEASKIRKLMKERGITKTPGCSWFHVGNR 828

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           VH F  G+ S+ ++ +IY  LD+L  KIK  GY PDT++VLH++++E+K + L  HSEK+
Sbjct: 829 VHTFVAGDKSNMESDKIYNFLDELFAKIKAAGYKPDTDYVLHDIDQEEKAESLCNHSEKL 888

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           AVAFG+++ +    IRVFKNLR+CGDCH AIKY+S V G  IV+RDS RFHH K+G CSC
Sbjct: 889 AVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSNVVGVTIVVRDSLRFHHFKNGNCSC 948

Query: 858 NDYW 861
            D+W
Sbjct: 949 KDFW 952



 Score =  258 bits (658), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 182/660 (27%), Positives = 315/660 (47%), Gaps = 49/660 (7%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           +G  PD   +  + K+C  SR+    K  H   TR  +  +  I N+ I  Y KC  +  
Sbjct: 34  RGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIGNAFIHAYGKCKCVEG 93

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A ++F  +   RD+V+W+S+ + YVN G     +++F +M       N    S+++  CS
Sbjct: 94  ARRVFDDLV-ARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKANPLTVSSILPGCS 152

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
           + +++  G  I+GF+++ G  + DV V  A ++ + K  + +  A  VFD M  ++ V W
Sbjct: 153 DLQDLKSGKEIHGFVVRHGMVE-DVFVSSAFVNFYAK-CLCVREAQTVFDLMPHRDVVTW 210

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
             + +     G P+  + +F +M+L G  PD  T+S ++SACS+L+   SGK +H +A++
Sbjct: 211 NSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDLKSGKAIHGFALK 270

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            G+  +V V  +LV++Y  C     V +++ VFD M   NV++W ++ + YV  G   K 
Sbjct: 271 HGMVENVFVSNALVNLYESCL---CVREAQAVFDLMPHRNVITWNSLASCYVNCGFPQK- 326

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            + +F +M    V P+    +S+L AC  L D    + ++  AVK G   D  V  +L++
Sbjct: 327 GLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVEDVFVCTALVN 386

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           +YA    + +A+  F+ +  +N+V++N++   Y      +K   +  E+   GV     T
Sbjct: 387 LYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMVLNGVKPDLVT 446

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
             S+L   S +  +  G+ IH   ++ G   +  + NAL+S+Y++C  V  A  VF  + 
Sbjct: 447 MLSILHACSDLQDLKSGKVIHGFAVRHGMVEDVFVCNALLSLYAKCVCVREAQVVFDLIP 506

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            R V SW  ++T +  +    + L +F +M  D +K + IT+  V+  C     I E  +
Sbjct: 507 HREVASWNGILTAYFTNKEYEKGLYMFSQMNRDEVKADEITWSVVIGGCVKNSRIEEAME 566

Query: 612 HFRSMY------DEHGIVQ-----------RM---------EHYA--------CMVDLLG 637
            FR M       DE  I             RM          H+          +VD+  
Sbjct: 567 IFRKMQTMGFKPDETTIYSILRACSLSECLRMGKEIHCYVFRHWKDWDLARTNALVDMYA 626

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA----AEMILEQDPQDPA 693
           + G L+ +      MP+  DV  W T + A  +HG+   GK A     +M+L     D A
Sbjct: 627 KCGGLSLSRNVFDMMPIK-DVFSWNTMIFANGMHGN---GKEALSLFEKMLLSMVKPDSA 682



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 136/515 (26%), Positives = 253/515 (49%), Gaps = 8/515 (1%)

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           +AI ++      G  P++  F AV +AC+ + +       +    +CG   SDV +G A 
Sbjct: 23  EAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVM-SDVSIGNAF 81

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           I  + K    +E A +VFD +  ++ V W  +       G P+  + +F  M L+    +
Sbjct: 82  IHAYGKCKC-VEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVKAN 140

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
             T+S ++  CS+L+   SGK++H + +R G+  DV V  + V+ YAKC     V +++ 
Sbjct: 141 PLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCL---CVREAQT 197

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           VFD M   +V++W ++ + YV  G   K  + +F +M+   V P+  T + +L AC +L 
Sbjct: 198 VFDLMPHRDVVTWNSLSSCYVNCGFPQK-GLNVFREMVLDGVKPDPVTVSCILSACSDLQ 256

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
           D    + ++  A+K G   +  V N+L+++Y     + +A+  F+ +  +N++++N++  
Sbjct: 257 DLKSGKAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMPHRNVITWNSLAS 316

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            Y      +K   +  E+   GV       +S+L   S +  +  G+ IH   +K G   
Sbjct: 317 CYVNCGFPQKGLNVFREMGLNGVKPDPMAMSSILPACSQLKDLKSGKTIHGFAVKHGMVE 376

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           +  +  AL+++Y+ C  V  A  VF  M  RNV++W S+ + +   GF  + L +F +M+
Sbjct: 377 DVFVCTALVNLYANCLCVREAQTVFDLMPHRNVVTWNSLSSCYVNCGFPQKGLNVFREMV 436

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
            +G+KP+ +T +++L ACS    +  G K        HG+V+ +     ++ L  +   +
Sbjct: 437 LNGVKPDLVTMLSILHACSDLQDLKSG-KVIHGFAVRHGMVEDVFVCNALLSLYAKCVCV 495

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            EA      +P   +V  W   L A   + + E G
Sbjct: 496 REAQVVFDLIP-HREVASWNGILTAYFTNKEYEKG 529



 Score =  139 bits (349), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 88/330 (26%), Positives = 163/330 (49%), Gaps = 5/330 (1%)

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           G   EA+K+++      + P+   F +V KAC    D+   +Q +  A + G   D  +G
Sbjct: 19  GLPNEAIKIYTSSRARGIKPDKPVFMAVAKACAASRDALKVKQFHDDATRCGVMSDVSIG 78

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+ I  Y +   +E AR+ F+ L  +++V++N++   Y      ++   +  ++    V 
Sbjct: 79  NAFIHAYGKCKCVEGARRVFDDLVARDVVTWNSLSACYVNCGFPQQGLNVFRKMGLNKVK 138

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            +  T +S+L G S +  +  G++IH  +++ G   +  + +A ++ Y++C  V  A  V
Sbjct: 139 ANPLTVSSILPGCSDLQDLKSGKEIHGFVVRHGMVEDVFVSSAFVNFYAKCLCVREAQTV 198

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  M  R+V++W S+ + +   GF  + L +F +M+ DG+KP+ +T   +LSACS    +
Sbjct: 199 FDLMPHRDVVTWNSLSSCYVNCGFPQKGLNVFREMVLDGVKPDPVTVSCILSACSDLQDL 258

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             G K       +HG+V+ +     +V+L      + EA      MP   +V+ W + L 
Sbjct: 259 KSG-KAIHGFALKHGMVENVFVSNALVNLYESCLCVREAQAVFDLMP-HRNVITWNS-LA 315

Query: 667 ACRVH-GDTELGKHA-AEMILEQDPQDPAA 694
           +C V+ G  + G +   EM L     DP A
Sbjct: 316 SCYVNCGFPQKGLNVFREMGLNGVKPDPMA 345


>gi|302761610|ref|XP_002964227.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
 gi|300167956|gb|EFJ34560.1| hypothetical protein SELMODRAFT_81196 [Selaginella moellendorffii]
          Length = 736

 Score =  528 bits (1361), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 261/745 (35%), Positives = 446/745 (59%), Gaps = 14/745 (1%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y KCG + +A  +F ++ +  + VSW+ +++++   G   +A+  +  M+  G  P+  
Sbjct: 1   MYGKCGSVADALAVFHAIEHP-NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F   I  CS+++++  G +++  +L+    + D+ +G ALI M+ +   DLE A K FD
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDIILGTALITMYARCR-DLELARKTFD 118

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL---SGFLPDRFTLSGVVSACSELEL 298
           +M +K  V W  +I   ++ G  R A++++ DM+     G  PD  T S  + ACS +  
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACSVVGD 178

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
            + G+++ +  + +G A D  V  +L++MY+KC   GS++ +RKVFDR+ + +V++W  +
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKC---GSLESARKVFDRLKNRDVIAWNTM 235

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I+GY + G    +A++LF  M      PN  TF  +L AC NL D      ++    + G
Sbjct: 236 ISGYAKQGAA-TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVKEHG 294

Query: 419 RALDDCVGNSLISMYAR-SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
              D  +GN L++MY + S  +E+AR+ FE L  ++++++N ++ AY +   ++ A ++ 
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            +++   V  +  T +++LS  + +GA  +G+ +HA I     +++  + N+L++MY+RC
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            +++    VF  + D++++SW+++I  +A+HG +   LE F+++L +G+  + +T ++ L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           SACSH G++ EG + F SM  +HG+     H+ CMVDLL R+G L  A   I  MP   D
Sbjct: 475 SACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI-LLSNLYASAGHWEYVANIRK 716
            + W + L  C++H DT+     A+ + E + +D  + + LLSN+YA AG W+ V   R 
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN 594

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
           R   R   K  GCS+IE ++ VH+F  G+ SHP+   I AE+ +L+ ++K+ GY+PD   
Sbjct: 595 RRAAR---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRM 651

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH ++EE+K Q L  HSEK+A+A+GLIST    P+ + KNLR C DCH A K+IS + G
Sbjct: 652 VLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVG 711

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R+IV+RDS RFHH ++G CSC DYW
Sbjct: 712 RKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 285/535 (53%), Gaps = 16/535 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+     M  +G  PD   + + +  C  S++   G+L+H+++  ++L    +I
Sbjct: 36  NGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETQLLEFDII 95

Query: 116 LNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           L + LI++Y++C DL  A K F  MG K+ +V+W+++I+ Y   G    A+ ++ +M+  
Sbjct: 96  LGTALITMYARCRDLELARKTFDEMG-KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSK 154

Query: 175 ---GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G  P+   FS+ + ACS   +++ G  I    +  GY  SD  V  ALI+M+ K GS
Sbjct: 155 SPEGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYA-SDSIVQNALINMYSKCGS 213

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             LESA KVFD++  ++ + W  MI+   + G    A+ LF  M  +   P+  T  G++
Sbjct: 214 --LESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLL 271

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +AC+ LE    G+ +H      G   D+ +G  L++MY KC+   S++++R+VF+R+   
Sbjct: 272 TACTNLEDLEQGRAIHRKVKEHGYESDLVIGNVLLNMYTKCS--SSLEEARQVFERLRTR 329

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V++W  +I  YVQ  G+ K+A+ +F  M    VAPN  T ++VL AC  L      + V
Sbjct: 330 DVITWNILIVAYVQY-GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388

Query: 411 YTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +   +  GR   D V  NSL++MY R G ++D    F ++ +K+LVS++T++ AYA++ +
Sbjct: 389 HA-LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYN 528
           S    E   E+   G+     T  S LS  S  G + +G Q    ++   G   ++  + 
Sbjct: 448 SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQSFLSMVGDHGLAPDYRHFL 507

Query: 529 ALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
            ++ + SR   +EAA  +  +M    + ++WTS+++G   H    RA  +  K+ 
Sbjct: 508 CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562



 Score =  199 bits (505), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 223/432 (51%), Gaps = 17/432 (3%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           +G  PD  T+S  L +C    +   G+ + +    S    +S++ N+LI++YSKCG L  
Sbjct: 157 EGMKPDAITFSSALYACSVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLES 216

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A K+F  + N RD+++W++MIS Y  +G    A+ +F  M      PN   F  ++ AC+
Sbjct: 217 ARKVFDRLKN-RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACT 275

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
           N E++  G  I+  + + GY +SD+ +G  L++M+ K S  LE A +VF+++  ++ + W
Sbjct: 276 NLEDLEQGRAIHRKVKEHGY-ESDLVIGNVLLNMYTKCSSSLEEARQVFERLRTRDVITW 334

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            ++I    Q G  +DA+ +F  M L    P+  TLS V+SAC+ L     GK +H+    
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS 394

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
                DV +  SL++MY +C   GS+DD+  VF  + D +++SW+ +I  Y Q  G  + 
Sbjct: 395 GRCKADVVLENSLMNMYNRC---GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH-GHSRT 450

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
            ++ F +++Q  +A +  T  S L AC  G +L   V +   +     G A D      +
Sbjct: 451 GLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGV-QSFLSMVGDHGLAPDYRHFLCM 509

Query: 430 ISMYARSGRMEDARKAFESL-FEKNLVSYNTMV-------DAYAKNLNSEKAFELLHEIE 481
           + + +R+GR+E A      + F  + V++ +++       D       ++K FEL  E E
Sbjct: 510 VDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESEDE 569

Query: 482 DTGVGTSAYTFA 493
            + V   +  +A
Sbjct: 570 HSTVTLLSNVYA 581



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 7/212 (3%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ ++  G+ + A+     M  +   P+  T S +L +C        GK VH+L+   + 
Sbjct: 338 IVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRC 397

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + + V+ NSL+++Y++CG L++   +F ++ +K  +VSWS++I++Y   G     +  F 
Sbjct: 398 KADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK-SLVSWSTLIAAYAQHGHSRTGLEHFW 456

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG--YFDSDVCVGCALIDMFV 227
           E+L+ G   ++    + + ACS+   +  G  +  FL   G      D      ++D+  
Sbjct: 457 ELLQEGLAADDVTMVSTLSACSHGGMLKEG--VQSFLSMVGDHGLAPDYRHFLCMVDLLS 514

Query: 228 KGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           +    LE+A  +   M    + V WT +++ C
Sbjct: 515 RAG-RLEAAENLIHDMPFLPDAVAWTSLLSGC 545


>gi|302762388|ref|XP_002964616.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
 gi|300168345|gb|EFJ34949.1| hypothetical protein SELMODRAFT_82072 [Selaginella moellendorffii]
          Length = 795

 Score =  528 bits (1359), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 270/752 (35%), Positives = 450/752 (59%), Gaps = 15/752 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N  + N ++  Y KCG +  A   F ++  K D  SW SM+++Y   G    A+ ++  M
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARAAFDAIARKND-YSWGSMLTAYAQNGHYRAALDLYKRM 115

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
                 PN   ++ V+ AC++ + +  G  I+  +        DV +  +L+ M+ K GS
Sbjct: 116 ---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             LE A ++F++M+ ++   W  MI    Q G   +AIRL+ DM +    P   T + V+
Sbjct: 173 --LEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSVL 227

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SACS L L   G+++H+     G  LD+ +  +L+ MYA+C     +DD+ K+F R+   
Sbjct: 228 SACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKC---LDDAAKIFQRLPRR 284

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V+SW+A+I  + ++   D EA++ +S M    V PN++TFASVL AC ++ D      V
Sbjct: 285 DVVSWSAMIAAFAETDLFD-EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRAV 343

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   +  G  +    G +L+ +Y   G +++AR  F+ +  ++   +  ++  Y+K  + 
Sbjct: 344 HDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGHR 403

Query: 471 EKAFELLHEIEDT-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
               EL  E+++T  V  +   ++ ++S  +S+GA     Q H+ I   G  S+  +  +
Sbjct: 404 TGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLATS 463

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L++MYSR  N+E+A QVF +M  R+ ++WT++I G+AKHG    AL ++ +M  +G +P+
Sbjct: 464 LVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEPS 523

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T++ VL ACSHAGL  +G + F S+  ++ +   + HY+C++DLL R+G L++A E I
Sbjct: 524 ELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEELI 583

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            +MP+  + + W + LGA R+H D +   HAA  I + DP DPA+++LLSN++A  G+  
Sbjct: 584 NAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNLA 643

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            +A++R  M  R + K  G SWIE  +++H+F+VG+ SHP+  EI+AEL +L+ KIKE G
Sbjct: 644 GMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEAG 703

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+P++  VLH++ E++K   L  HSEK+A+AFGLI+T+    +R+F  LR+C DCH+A+K
Sbjct: 704 YVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAVK 763

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +IS +  REI++RDS+RFH  +DG+CSC DYW
Sbjct: 764 FISAIARREIIVRDSSRFHKFRDGQCSCGDYW 795



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 261/513 (50%), Gaps = 14/513 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK-LEPNSVILNSLISLYS 124
           LDL  +    P+   Y+ +L +C   +    GK +HS ++ +K L+ + ++ NSL+++Y+
Sbjct: 109 LDLYKRMDLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILENSLLTMYA 168

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KCG L +A ++F+ M   R + SW++MI++Y   G   +AI ++ +M      P+   F+
Sbjct: 169 KCGSLEDAKRLFERMSG-RSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFT 224

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +V+ ACSN   +  G  I+  +   G  + D+ +  AL+ M+ +    L+ A K+F ++ 
Sbjct: 225 SVLSACSNLGLLDQGRKIHALISSRGT-ELDLSLQNALLTMYARCKC-LDDAAKIFQRLP 282

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++ V W+ MI    +     +AI  +  M L G  P+ +T + V+ AC+ +    +G+ 
Sbjct: 283 RRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRA 342

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   +  G  + +  G +LVD+Y   T  GS+D++R +FD++ + +   WT +I GY +
Sbjct: 343 VHDQILGNGYKITLVNGTALVDLY---TSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 399

Query: 365 SGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            G R    ++L+ +M      P     ++ V+ AC +L     A Q ++     G   D 
Sbjct: 400 QGHRTG-VLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDF 458

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            +  SL++MY+R G +E AR+ F+ +  ++ +++ T++  YAK+     A  L  E+E  
Sbjct: 459 VLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELE 518

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEA 542
           G   S  TF  +L   S  G   +G+Q+   I        N   Y+ +I + SR   +  
Sbjct: 519 GAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSD 578

Query: 543 AFQVFKEME-DRNVISWTSMITGFAKHGFAARA 574
           A ++   M  + N ++W+S++     H    RA
Sbjct: 579 AEELINAMPVEPNDVTWSSLLGASRIHKDVKRA 611



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 59/247 (23%), Positives = 104/247 (42%), Gaps = 36/247 (14%)

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           QIH RI      +N  + N ++  Y +C +V +A   F  +  +N  SW SM+T +A++G
Sbjct: 45  QIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARAAFDAIARKNDYSWGSMLTAYAQNG 103

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFR-------------- 614
               AL+++ +M    ++PN + Y  VL AC+    + EG   H R              
Sbjct: 104 HYRAALDLYKRM---DLQPNPVVYTTVLGACASIKALEEGKAIHSRISGTKGLKLDVILE 160

Query: 615 -----------SMYDEHGIVQRM-----EHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
                      S+ D   + +RM       +  M+    +SG   EA+     M +   V
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPSV 220

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYASAGHWEYVANIRKR 717
             + + L AC   G  + G+    +I  +  + D +    L  +YA     +  A I +R
Sbjct: 221 RTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQR 280

Query: 718 MKERNLI 724
           +  R+++
Sbjct: 281 LPRRDVV 287


>gi|224096620|ref|XP_002310674.1| predicted protein [Populus trichocarpa]
 gi|222853577|gb|EEE91124.1| predicted protein [Populus trichocarpa]
          Length = 908

 Score =  527 bits (1358), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 290/796 (36%), Positives = 466/796 (58%), Gaps = 12/796 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G   + +T S ++ +C+   N  LG  V   + +  LE N  + NSLIS++   G 
Sbjct: 122 MRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFGYFGS 181

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EA  +F  M ++ D +SW+SMI++Y+  G   +++  F  M  +    N    S ++ 
Sbjct: 182 VEEACYVFSGM-DEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLA 240

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            C + +N+  G  I+  +LK G+ +S+VC    LI M+       E A  VF  M EK+ 
Sbjct: 241 GCGSVDNLKWGRGIHSLVLKFGW-NSNVCASNTLITMYSDAG-RCEDAELVFQGMVEKDM 298

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           + W  M+    Q G   DA++L   M       +  T +  ++ACS+ E  T GK LH+ 
Sbjct: 299 ISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHAL 358

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I  GL  +V VG +LV +YAK    G + +++KVF  M   + ++W A+I G+  S   
Sbjct: 359 VIHVGLHENVIVGNALVTLYAK---SGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEP 415

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCV 425
           D EA+K F  M +  V  N+ T ++VL AC    +LL+  +   ++   +  G   D+ V
Sbjct: 416 D-EALKAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMP--IHAFIILTGFQSDEYV 472

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            NSLI+MYA+ G +  +   F+ L  KN  ++N M+ A A + + E+A + L E+   GV
Sbjct: 473 QNSLITMYAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGV 532

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
               ++F+  L+ A+ +  + +G+Q+H   +K G +SN  + +A + MY +C  ++   +
Sbjct: 533 NVDEFSFSECLAAAAKLAILEEGQQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLR 592

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +     +R+ +SW  + + F++HGF  +A E F++M+  G+KP+ +T++++LSACSH G+
Sbjct: 593 IIPRPINRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPDHVTFVSLLSACSHGGM 652

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + EG  ++ SM  E GI  ++ H  C++DLLGRSG   EA  FI+ MP+S    VWR+ L
Sbjct: 653 VEEGLAYYDSMIKEFGIPAKIGHCVCIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLL 712

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
            AC+ HG+ ELG+ A E +L+ DP D +A++L SN+ A+ G WE V  IR++M    + K
Sbjct: 713 AACKTHGNLELGRKAVENLLKLDPSDDSAYVLYSNICATTGKWEDVEKIRRQMGLNKIKK 772

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
           +  CSW++  NK+  F +G+ SHP+  EIYA+L++L   IKE GY+PD ++ L + +EEQ
Sbjct: 773 KPACSWVKLKNKLSLFGMGDHSHPQASEIYAKLEELKKMIKEAGYIPDISYALQDTDEEQ 832

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           K   L+ HSE++A+A+GLIS+ +   +++FKNLRVCGDCH+  K+ S + GR+IVLRD  
Sbjct: 833 KEHNLWNHSERLALAYGLISSPEGSTLKIFKNLRVCGDCHSVYKFASGILGRKIVLRDPY 892

Query: 846 RFHHIKDGKCSCNDYW 861
           RFH    G+CSC DYW
Sbjct: 893 RFHQFSGGQCSCTDYW 908



 Score =  219 bits (557), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 170/656 (25%), Positives = 329/656 (50%), Gaps = 19/656 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL-GKLVHSLLTRSKLEPNSVI 115
           G  ++++   + M   G  P     + L+ +C RS    + G  VH  + +  L  +  +
Sbjct: 8   GSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVGLLSDVFV 67

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             SL+ LY   G   +A K+F+ M  K ++VSW++++ +YV+ G+    ++++  M   G
Sbjct: 68  GTSLVHLYGNYGLAADAMKVFQEMIYK-NVVSWTALMVAYVDYGEPSMVMNIYRRMRSEG 126

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLE 234
              N+   S+VI  C + EN  +G+ + G ++K G  +++V V  +LI MF   GSV  E
Sbjct: 127 MSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYG-LETNVSVANSLISMFGYFGSV--E 183

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  VF  M E +T+ W  MI    + G  ++++R F  M       +  TLS +++ C 
Sbjct: 184 EACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCG 243

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            ++    G+ +HS  ++ G   +VC   +L+ MY+     G  +D+  VF  M++ +++S
Sbjct: 244 SVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDA---GRCEDAELVFQGMVEKDMIS 300

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W +++  Y Q  G   +A+KL + M   +   N+ TF S L AC +   +   + ++   
Sbjct: 301 WNSMMACYAQD-GNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGKILHALV 359

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +  G   +  VGN+L+++YA+SG M +A+K F+++ +++ V++N ++  +A +   ++A 
Sbjct: 360 IHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSEEPDEAL 419

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGA-SSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
           +    + + GV  +  T +++L    +    +  G  IHA II +GF+S+  + N+LI+M
Sbjct: 420 KAFKLMREEGVPINYITISNVLGACLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITM 479

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C ++ ++  +F  +  +N  +W +M+   A HG    AL+   +M   G+  +  ++
Sbjct: 480 YAKCGDLNSSNNIFDRLTSKNASAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSF 539

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
              L+A +   ++ EG +    +  + G        +  +D+ G+ G + + L  I   P
Sbjct: 540 SECLAAAAKLAILEEG-QQLHGLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRII-PRP 597

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHA-AEMI-LEQDPQDPAAHILLSNLYASAGH 707
           ++   L W     +   HG  E  K    EMI L   P     H+   +L ++  H
Sbjct: 598 INRSRLSWNILTSSFSRHGFFEKAKETFHEMINLGVKPD----HVTFVSLLSACSH 649



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/451 (31%), Positives = 242/451 (53%), Gaps = 9/451 (1%)

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI-GHIIYGFLLKCG 210
           +S +V  G   +++  F EM + G  P+    ++++ AC  +E + I G  ++GF++K G
Sbjct: 1   MSGFVRAGSYRESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGVQVHGFIVKVG 60

Query: 211 YFDSDVCVGCALIDMFVKGSVDLES-AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
              SDV VG +L+ ++  G+  L + A KVF +M  KN V WT ++      G P   + 
Sbjct: 61  LL-SDVFVGTSLVHLY--GNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMN 117

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
           ++  M   G   +  T+S V+S C  LE    G Q+    I+ GL  +V V  SL+ M+ 
Sbjct: 118 IYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFG 177

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
                GSV+++  VF  M +H+ +SW ++I  Y+++ G  KE+++ FS M +     N  
Sbjct: 178 YF---GSVEEACYVFSGMDEHDTISWNSMIAAYIRN-GLCKESLRCFSWMFRVHKEINST 233

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           T +++L  CG++ +      +++  +K G   + C  N+LI+MY+ +GR EDA   F+ +
Sbjct: 234 TLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGM 293

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            EK+++S+N+M+  YA++ N   A +LL  +     G +  TF S L+  S      +G+
Sbjct: 294 VEKDMISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAACSDPEFATEGK 353

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
            +HA +I  G   N  + NAL+++Y++   +  A +VF+ M  R+ ++W ++I G A   
Sbjct: 354 ILHALVIHVGLHENVIVGNALVTLYAKSGLMIEAKKVFQTMPKRDGVTWNALIGGHADSE 413

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSAC 600
               AL+ F  M  +G+  N IT   VL AC
Sbjct: 414 EPDEALKAFKLMREEGVPINYITISNVLGAC 444



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 146/537 (27%), Positives = 254/537 (47%), Gaps = 17/537 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G  ++++     M +     +  T S +L  C    N   G+ +HSL+ +     N
Sbjct: 207 YIRNGLCKESLRCFSWMFRVHKEINSTTLSTMLAGCGSVDNLKWGRGIHSLVLKFGWNSN 266

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+LI++YS  G   +A  +F+ M  K D++SW+SM++ Y   G  +DA+ +   M 
Sbjct: 267 VCASNTLITMYSDAGRCEDAELVFQGMVEK-DMISWNSMMACYAQDGNCLDALKLLATMF 325

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            +    N   F++ + ACS+ E    G I++  ++  G  + +V VG AL+ ++ K  + 
Sbjct: 326 YMRRGANYVTFTSALAACSDPEFATEGKILHALVIHVGLHE-NVIVGNALVTLYAKSGLM 384

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A KVF  M +++ V W  +I        P +A++ F  M   G   +  T+S V+ A
Sbjct: 385 IE-AKKVFQTMPKRDGVTWNALIGGHADSEEPDEALKAFKLMREEGVPINYITISNVLGA 443

Query: 293 C-SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           C +  +L   G  +H++ I TG   D  V  SL+ MYAKC   G ++ S  +FDR+   N
Sbjct: 444 CLAPNDLLEHGMPIHAFIILTGFQSDEYVQNSLITMYAKC---GDLNSSNNIFDRLTSKN 500

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
             S    +       G  +EA+K   +M +  V  + F+F+  L A   L      +Q++
Sbjct: 501 A-SAWNAMMAANAHHGHMEEALKFLLEMRRAGVNVDEFSFSECLAAAAKLAILEEGQQLH 559

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             AVK G   +  V ++ + MY + G ++D  +       ++ +S+N +  +++++   E
Sbjct: 560 GLAVKLGCDSNPFVASATMDMYGKCGEIDDVLRIIPRPINRSRLSWNILTSSFSRHGFFE 619

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFES--NHCIYN 528
           KA E  HE+ + GV     TF SLLS  S  G + +G   +  +IK  G  +   HC+  
Sbjct: 620 KAKETFHEMINLGVKPDHVTFVSLLSACSHGGMVEEGLAYYDSMIKEFGIPAKIGHCV-- 677

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG---FAARALEIFYKM 581
            +I +  R      A    KEM        W S++     HG      +A+E   K+
Sbjct: 678 CIIDLLGRSGRFAEAETFIKEMPVSPTDHVWRSLLAACKTHGNLELGRKAVENLLKL 734



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 90/346 (26%), Positives = 159/346 (45%), Gaps = 39/346 (11%)

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN---LLDSNVAEQVYTHAV 415
           ++G+V++G   +E+++ F++M    V P+    AS++ AC     +L   V  QV+   V
Sbjct: 1   MSGFVRAGSY-RESMRFFNEMRDFGVKPSGIAVASLVTACERSEWMLIEGV--QVHGFIV 57

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K G   D  VG SL+ +Y   G   DA K F+ +  KN+VS+  ++ AY           
Sbjct: 58  KVGLLSDVFVGTSLVHLYGNYGLAADAMKVFQEMIYKNVVSWTALMVAYVDYGEPSMVMN 117

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           +   +   G+  +  T +S++S   S+     G Q+   +IK G E+N  + N+LISM+ 
Sbjct: 118 IYRRMRSEGMSCNDNTMSSVISTCVSLENELLGYQVLGHVIKYGLETNVSVANSLISMFG 177

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
              +VE A  VF  M++ + ISW SMI  + ++G    +L  F  M     + N  T   
Sbjct: 178 YFGSVEEACYVFSGMDEHDTISWNSMIAAYIRNGLCKESLRCFSWMFRVHKEINSTTLST 237

Query: 596 VLSACS-----------HAGLISEGWKH-------FRSMYDE-----------HGIVQR- 625
           +L+ C            H+ ++  GW           +MY +            G+V++ 
Sbjct: 238 MLAGCGSVDNLKWGRGIHSLVLKFGWNSNVCASNTLITMYSDAGRCEDAELVFQGMVEKD 297

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRS---MPLSADVLVWRTFLGAC 668
           M  +  M+    + G+  +AL+ + +   M   A+ + + + L AC
Sbjct: 298 MISWNSMMACYAQDGNCLDALKLLATMFYMRRGANYVTFTSALAAC 343


>gi|302814190|ref|XP_002988779.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
 gi|300143350|gb|EFJ10041.1| hypothetical protein SELMODRAFT_128847 [Selaginella moellendorffii]
          Length = 796

 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 272/753 (36%), Positives = 451/753 (59%), Gaps = 16/753 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N  + N ++  Y KCG +  A   F ++  K D  SW SM+++Y   G    A+ ++  M
Sbjct: 57  NVFLGNEIVRAYGKCGSVASARVAFDAIARKND-YSWGSMLTAYAQNGHYRAALDLYKRM 115

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
                 PN   ++ V+ AC++ E +  G  I+  +        DV +  +L+ M+ K GS
Sbjct: 116 ---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYAKCGS 172

Query: 231 VDLESAYKVFDKMTEKNTVG-WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             LE A ++F++M+ + +V  W  MI    Q G   +AIRL+ DM +    P   T + V
Sbjct: 173 --LEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVE---PSVRTFTSV 227

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +SACS L L   G+++H+     G  LD+ +  +L+ MYA+C     +DD+ K+F R+  
Sbjct: 228 LSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKC---LDDAAKIFQRLPR 284

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SW+A+I  + ++   D EA++ +S M    V PN++TFASVL AC ++ D      
Sbjct: 285 RDVVSWSAMIAAFAETDLFD-EAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRA 343

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+   +  G  +    G +L+ +Y   G +++AR  F+ +  ++   +  ++  Y+K  +
Sbjct: 344 VHDQILGNGYKITLVNGTALVDLYTSYGSLDEARSLFDQIENRDEGLWTVLIGGYSKQGH 403

Query: 470 SEKAFELLHEIEDT-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
                EL  E+++T  V  +   ++ ++S  +S+GA     Q H+ I   G  S+  +  
Sbjct: 404 RTGVLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDFVLAT 463

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           +L++MYSR  N+E+A QVF +M  R+ ++WT++I G+AKHG    AL ++ +M  +G +P
Sbjct: 464 SLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELEGAEP 523

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + +T++ VL ACSHAGL  +G + F S+  ++ +   + HY+C++DLL R+G L++A E 
Sbjct: 524 SELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSDAEEL 583

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I +MP+  + + W + LGA R+H D +   HAA  I + DP DPA+++LLSN++A  G+ 
Sbjct: 584 INAMPVEPNDVTWSSLLGASRIHKDVKRATHAAGQITKLDPVDPASYVLLSNVHAVTGNL 643

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             +A++R  M  R + K  G SWIE  +++H+F+VG+ SHP+  EI+AEL +L+ KIKE 
Sbjct: 644 AGMASVRNTMVARGVKKRRGSSWIEVADQIHEFNVGDNSHPRFQEIFAELQRLSPKIKEA 703

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+P++  VLH++ E++K   L  HSEK+A+AFGLI+T+    +R+F  LR+C DCH+A+
Sbjct: 704 GYVPESEEVLHDVGEKEKELLLRLHSEKLAIAFGLIATAPGTTLRIFNTLRICHDCHSAV 763

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS +  REI++RDS+RFH  +DG+CSC DYW
Sbjct: 764 KFISAIARREIIVRDSSRFHKFRDGQCSCGDYW 796



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 140/513 (27%), Positives = 261/513 (50%), Gaps = 13/513 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK-LEPNSVILNSLISLYS 124
           LDL  +    P+   Y+ +L +C        GK +HS ++ +K L+ + ++ NSL+++Y+
Sbjct: 109 LDLYKRMDLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILENSLLTMYA 168

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KCG L +A ++F+ M  +R + SW++MI++Y   G   +AI ++ +M      P+   F+
Sbjct: 169 KCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDM---DVEPSVRTFT 225

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +V+ ACSN   +  G  I+  +   G  + D+ +  AL+ M+ +    L+ A K+F ++ 
Sbjct: 226 SVLSACSNLGLLDQGRKIHALISSRGT-ELDLSLQNALLTMYARCKC-LDDAAKIFQRLP 283

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++ V W+ MI    +     +AI  +  M L G  P+ +T + V+ AC+ +    +G+ 
Sbjct: 284 RRDVVSWSAMIAAFAETDLFDEAIEFYSKMQLEGVRPNYYTFASVLLACASVGDLRAGRA 343

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   +  G  + +  G +LVD+Y   T  GS+D++R +FD++ + +   WT +I GY +
Sbjct: 344 VHDQILGNGYKITLVNGTALVDLY---TSYGSLDEARSLFDQIENRDEGLWTVLIGGYSK 400

Query: 365 SGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            G R    ++L+ +M      P     ++ V+ AC +L     A Q ++     G   D 
Sbjct: 401 QGHRTG-VLELYREMKNTTKVPATKIIYSCVISACASLGAFADARQAHSDIEADGMISDF 459

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            +  SL++MY+R G +E AR+ F+ +  ++ +++ T++  YAK+     A  L  E+E  
Sbjct: 460 VLATSLVNMYSRWGNLESARQVFDKMSSRDTLAWTTLIAGYAKHGEHGLALGLYKEMELE 519

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEA 542
           G   S  TF  +L   S  G   +G+Q+   I        N   Y+ +I + SR   +  
Sbjct: 520 GAEPSELTFMVVLYACSHAGLQEQGKQLFISIQSDYAMHPNIAHYSCIIDLLSRAGRLSD 579

Query: 543 AFQVFKEME-DRNVISWTSMITGFAKHGFAARA 574
           A ++   M  + N ++W+S++     H    RA
Sbjct: 580 AEELINAMPVEPNDVTWSSLLGASRIHKDVKRA 612



 Score = 69.3 bits (168), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 104/248 (41%), Gaps = 37/248 (14%)

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           QIH RI      +N  + N ++  Y +C +V +A   F  +  +N  SW SM+T +A++G
Sbjct: 45  QIHDRI-SGAASANVFLGNEIVRAYGKCGSVASARVAFDAIARKNDYSWGSMLTAYAQNG 103

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFR-------------- 614
               AL+++ +M    ++PN + Y  VL AC+    + EG   H R              
Sbjct: 104 HYRAALDLYKRM---DLQPNPVVYTTVLGACASIEALEEGKAIHSRISGTKGLKLDVILE 160

Query: 615 -----------SMYDEHGIVQRM------EHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
                      S+ D   + +RM        +  M+    +SG   EA+     M +   
Sbjct: 161 NSLLTMYAKCGSLEDAKRLFERMSGRRSVSSWNAMIAAYAQSGHFEEAIRLYEDMDVEPS 220

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYASAGHWEYVANIRK 716
           V  + + L AC   G  + G+    +I  +  + D +    L  +YA     +  A I +
Sbjct: 221 VRTFTSVLSACSNLGLLDQGRKIHALISSRGTELDLSLQNALLTMYARCKCLDDAAKIFQ 280

Query: 717 RMKERNLI 724
           R+  R+++
Sbjct: 281 RLPRRDVV 288


>gi|125573515|gb|EAZ15030.1| hypothetical protein OsJ_04972 [Oryza sativa Japonica Group]
          Length = 813

 Score =  527 bits (1358), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 292/750 (38%), Positives = 434/750 (57%), Gaps = 22/750 (2%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV--DAIHMFVEMLELGFCPNEYCFS 184
           G L+ A+ +F  + +  D+ +++ +I +Y +       D +H++  ML     PN Y F 
Sbjct: 71  GHLSRAHHLFDQIPSP-DVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
             ++ACS   +   G  I+   +  G   +D+ V  AL+DM+VK +  L  A  +F  M 
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAG-LQADLFVSTALLDMYVKCAC-LPDAAHIFATMP 187

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIR--LFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
            ++ V W  M+      G    A+   L + M +    P+  TL  ++   ++      G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 303 KQLHSWAIR----------TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
             +H++ IR          + L   V +G +L+DMYAKC   GS+  +R+VFD M   N 
Sbjct: 248 TSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC---GSLLYARRVFDAMPARNE 304

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++W+A+I G+V    R  +A  LF  M+ QG    +  + AS L+AC +L    + EQ++
Sbjct: 305 VTWSALIGGFVLCS-RMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 363

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
               K G   D   GNSL+SMYA++G ++ A   F+ +  K+ VSY+ +V  Y +N  +E
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +AF +  +++   V   A T  SL+   S + A+  G   H  +I  G  S   I NALI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C  ++ + QVF  M  R+++SW +MI G+  HG    A  +F +M   G  P+G+
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+I +LSACSH+GL+ EG   F  M   +G+  RMEHY CMVDLL R G L EA EFI+S
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MPL ADV VW   LGACRV+ + +LGK  + MI E  P+     +LLSN+Y++AG ++  
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           A +R   K +   K  GCSWIE +  +H F  G+ SHP++ EIY ELD + + IK+ GY 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PDT+FVL +LEEE+K + L  HSEK+A+A+G++S S+ K I V KNLRVCGDCHT IK+I
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S+V  R I++RD+NRFHH K+G+CSC D+W
Sbjct: 784 SLVKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 251/505 (49%), Gaps = 28/505 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+   LK+C    + H G+ +H     + L+ +  +  +L+ +Y KC  L +A  I
Sbjct: 123 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 182

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAI-HMFVEMLELG-FCPNEYCFSAVIRACSNT 193
           F +M   RD+V+W++M++ Y + G    A+ H+    +++    PN     A++   +  
Sbjct: 183 FATM-PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 241

Query: 194 ENVAIGHIIYGFLLKC---------GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
             +A G  ++ + ++                V +G AL+DM+ K    L  A +VFD M 
Sbjct: 242 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCG-SLLYARRVFDAMP 300

Query: 245 EKNTVGWTLMI---TRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELF 299
            +N V W+ +I     C+++     A  LF  M+  G  FL    +++  + AC+ L+  
Sbjct: 301 ARNEVTWSALIGGFVLCSRM---TQAFLLFKAMLAQGLCFLSPT-SIASALRACASLDHL 356

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+QLH+   ++G+  D+  G SL+ MYAK    G +D +  +FD M   + +S++A++
Sbjct: 357 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKA---GLIDQAIALFDEMAVKDTVSYSALV 413

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +GYVQ+ GR +EA  +F  M    V P+  T  S++ AC +L         +   + RG 
Sbjct: 414 SGYVQN-GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 472

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           A +  + N+LI MYA+ GR++ +R+ F  +  +++VS+NTM+  Y  +   ++A  L  E
Sbjct: 473 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 532

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCA 538
           + + G      TF  LLS  S  G + +G+   H      G       Y  ++ + SR  
Sbjct: 533 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 592

Query: 539 NVEAAFQVFKEMEDR-NVISWTSMI 562
            ++ A++  + M  R +V  W +++
Sbjct: 593 FLDEAYEFIQSMPLRADVRVWVALL 617



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR ++A      M      PD  T   L+ +C        G+  H  +    L   
Sbjct: 416 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 475

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I N+LI +Y+KCG ++ + ++F  M + RDIVSW++MI+ Y   G   +A  +F+EM 
Sbjct: 476 TSICNALIDMYAKCGRIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMN 534

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG----HII---YGFLLKCGYFDSDVCVGCALIDM 225
            LGF P+   F  ++ ACS++  V  G    H++   YG   +  ++   +C    ++D+
Sbjct: 535 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY---IC----MVDL 587

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
             +G   L+ AY+    M  +  V  W  ++  C
Sbjct: 588 LSRGGF-LDEAYEFIQSMPLRADVRVWVALLGAC 620



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 46/178 (25%), Positives = 88/178 (49%), Gaps = 4/178 (2%)

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA--FELLHEIEDTGVGTSAYTFA 493
           SG +  A   F+ +   ++ +YN ++ AY+ +  +  A    L   +    V  + YTF 
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
             L   S++     G  IH   I +G +++  +  AL+ MY +CA +  A  +F  M  R
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 554 NVISWTSMITGFAKHGFAARALE--IFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           ++++W +M+ G+A HG    A+   +  +M    ++PN  T +A+L   +  G +++G
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247


>gi|297804280|ref|XP_002870024.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315860|gb|EFH46283.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 871

 Score =  527 bits (1357), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/790 (35%), Positives = 469/790 (59%), Gaps = 14/790 (1%)

Query: 77  DLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           D+D  +L  +L+ C  S++   GK V + +  +    +S + + L  +Y+ CGDL EA++
Sbjct: 91  DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASR 150

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F  +  ++ +  W+ +++     G    +I +F +M+  G   + Y FS V ++ S+  
Sbjct: 151 VFDQVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           +V  G  ++G++LK G+ + +  VG +L+  ++K    ++SA KVFD+MTE++ + W  +
Sbjct: 210 SVNGGEQLHGYILKSGFGERN-SVGNSLVAFYLKNH-RVDSARKVFDEMTERDVISWNSI 267

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I      G     + +F+ M+ SG   D  T+  V + C++  L + G+ +H + ++   
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACF 327

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           + +     +L+DMY+KC   G +D ++ VF  M   +V+S+T++I GY + G    EAVK
Sbjct: 328 SREDRFCNTLLDMYSKC---GDLDSAKVVFREMSGRSVVSYTSMIAGYAREG-LAGEAVK 383

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           LF +M +  ++P+ +T  +VL  C    LLD    ++V+    +     D  V N+L+ M
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARNRLLDE--GKRVHEWIKENDMGFDIFVSNALMDM 441

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-EDTGVGTSAYT 491
           YA+ G M +A   F  +  K+++S+NT++  Y+KN  + +A  L + +  +        T
Sbjct: 442 YAKCGSMREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERT 501

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            A +L   +S+ A  KG +IH  I+++G+ S+  + N+L+ MY++C  +  A  +F ++ 
Sbjct: 502 VACVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLARLLFDDIT 561

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            ++++SWT MI G+  HGF   A+ +F +M   GI+P+ I+++++L ACSH+GL+ EGW+
Sbjct: 562 SKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWR 621

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
            F  M  E  I   +EHYAC+VD+L R+G+L++A  FI +MP+  D  +W   L  CR+H
Sbjct: 622 FFNIMRHECKIEPTVEHYACIVDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIH 681

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            D +L +  AE + E +P++   ++L++N+YA A  WE V  +RKR+ +R L K  GCSW
Sbjct: 682 HDVKLAERVAEKVFELEPENTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGLRKNPGCSW 741

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           IE   +V+ F  G++S+P+T +I A L  +  ++ E GY P T + L + EE +K + L 
Sbjct: 742 IEIKGRVNIFVAGDSSNPETEKIEAFLRGVRARMIEEGYSPLTKYALIDAEEMEKEEALC 801

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSEK+A+A G+IS+   K IRV KNLRVCGDCH   K++S +T REIVLRDSNRFH  K
Sbjct: 802 GHSEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFK 861

Query: 852 DGKCSCNDYW 861
           DG CSC  +W
Sbjct: 862 DGHCSCRGFW 871



 Score =  216 bits (551), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 282/573 (49%), Gaps = 20/573 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G    +I     M   G   D  T+S + KS    R+ + G+ +H  + +S     + + 
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVNGGEQLHGYILKSGFGERNSVG 233

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSL++ Y K   ++ A K+F  M  +RD++SW+S+I+ YV+ G     + +FV+ML  G 
Sbjct: 234 NSLVAFYLKNHRVDSARKVFDEM-TERDVISWNSIINGYVSNGLAEKGLSVFVQMLFSGI 292

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +     +V   C+++  +++G  ++ F +K  +   D      L+DM+ K   DL+SA
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSREDRFCN-TLLDMYSKCG-DLDSA 350

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             VF +M+ ++ V +T MI    + G   +A++LF +M   G  PD +T++ V++ C+  
Sbjct: 351 KVVFREMSGRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARN 410

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L   GK++H W     +  D+ V  +L+DMYAKC   GS+ ++  VF  M   +++SW 
Sbjct: 411 RLLDEGKRVHEWIKENDMGFDIFVSNALMDMYAKC---GSMREAELVFSEMRVKDIISWN 467

Query: 357 AIITGYVQSGGRDKEAVKLFS-DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            +I GY ++   + EA+ LF+  +++ + +P+  T A VL AC +L   +   +++ + +
Sbjct: 468 TVIGGYSKNCYAN-EALSLFNLLLVEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + G   D  V NSL+ MYA+ G +  AR  F+ +  K+LVS+  M+  Y  +   ++A  
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIA 586

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI-----HARIIKSGFESNHCIYNAL 530
           L +++   G+     +F SLL   S  G + +G +      H   I+   E   CI    
Sbjct: 587 LFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI---- 642

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + M +R  N+  A++  + M    +   W +++ G   H     A  +  K+    ++P 
Sbjct: 643 VDMLARTGNLSKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAERVAEKVFE--LEPE 700

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
              Y  +++         E  K  R    + G+
Sbjct: 701 NTGYYVLMANIYAEAEKWEEVKRLRKRIGQRGL 733



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/402 (31%), Positives = 207/402 (51%), Gaps = 15/402 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G  +K +     M   G   DL T   +   C  SR   LG+ VH    ++     
Sbjct: 271 YVSNGLAEKGLSVFVQMLFSGIEIDLATIVSVFAGCADSRLISLGRAVHCFGVKACFSRE 330

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+L+ +YSKCGDL+ A  +F+ M   R +VS++SMI+ Y   G   +A+ +F EM 
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKVVFREMSG-RSVVSYTSMIAGYAREGLAGEAVKLFEEME 389

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           E G  P+ Y  +AV+  C+    +  G  ++ + +K      D+ V  AL+DM+ K GS 
Sbjct: 390 EEGISPDVYTVTAVLNCCARNRLLDEGKRVHEW-IKENDMGFDIFVSNALMDMYAKCGS- 447

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-LDMILSGFLPDRFTLSGVV 290
            +  A  VF +M  K+ + W  +I   ++     +A+ LF L ++   F PD  T++ V+
Sbjct: 448 -MREAELVFSEMRVKDIISWNTVIGGYSKNCYANEALSLFNLLLVEKRFSPDERTVACVL 506

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC+ L  F  G+++H + +R G   D  V  SLVDMYAKC   G++  +R +FD +   
Sbjct: 507 PACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC---GALLLARLLFDDITSK 563

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVA- 407
           +++SWT +I GY    G  KEA+ LF+ M Q  + P+  +F S+L AC +  L+D     
Sbjct: 564 DLVSWTVMIAGYGMH-GFGKEAIALFNQMRQAGIEPDEISFVSLLYACSHSGLVDEGWRF 622

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
             +  H  K    ++      ++ M AR+G +  A +  E++
Sbjct: 623 FNIMRHECKIEPTVEHYA--CIVDMLARTGNLSKAYRFIENM 662



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 92/317 (29%), Positives = 162/317 (51%), Gaps = 19/317 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   +A+   + M ++G  PD+ T + +L  C R+R    GK VH  +  + +  +
Sbjct: 372 YAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARNRLLDEGKRVHEWIKENDMGFD 431

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF-VEM 171
             + N+L+ +Y+KCG + EA  +F  M  K DI+SW+++I  Y       +A+ +F + +
Sbjct: 432 IFVSNALMDMYAKCGSMREAELVFSEMRVK-DIISWNTVIGGYSKNCYANEALSLFNLLL 490

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
           +E  F P+E   + V+ AC++      G  I+G++++ GYF SD  V  +L+DM+ K G+
Sbjct: 491 VEKRFSPDERTVACVLPACASLSAFDKGREIHGYIMRNGYF-SDRHVANSLVDMYAKCGA 549

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           + L  A  +FD +T K+ V WT+MI      G  ++AI LF  M  +G  PD  +   ++
Sbjct: 550 LLL--ARLLFDDITSKDLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEPDEISFVSLL 607

Query: 291 SACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
            ACS   L   G +      H   I   +    C+    VDM A+    G++  + +  +
Sbjct: 608 YACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI----VDMLART---GNLSKAYRFIE 660

Query: 346 RM-LDHNVMSWTAIITG 361
            M +  +   W A++ G
Sbjct: 661 NMPIPPDATIWGALLCG 677



 Score = 52.0 bits (123), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 32/149 (21%), Positives = 76/149 (51%), Gaps = 2/149 (1%)

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
           + F++++   NT +  + ++ N + A +LLH      +     T  S+L   +   ++  
Sbjct: 55  TTFDRSVTDANTQLRRFCESGNLKNAVKLLHVSGKWDI--DPRTLCSVLQLCADSKSLKD 112

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+++   I  +GF  +  + + L  MY+ C +++ A +VF +++    + W  ++   AK
Sbjct: 113 GKEVDNFIRGNGFVLDSNLGSKLALMYTNCGDLKEASRVFDQVKIEKALFWNILMNELAK 172

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAV 596
            G  + ++ +F KM++ G++ +  T+  V
Sbjct: 173 SGDFSGSIGLFKKMMSSGVEMDSYTFSCV 201


>gi|147856409|emb|CAN80331.1| hypothetical protein VITISV_018275 [Vitis vinifera]
          Length = 681

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 273/677 (40%), Positives = 412/677 (60%), Gaps = 7/677 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           VI+  + T+ +  G  ++  L+  GY          L++M+ K   +L+ A K+FD M +
Sbjct: 11  VIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTN-HLVNMYSKCG-ELDHALKLFDTMPQ 68

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N V WT MI+  +Q     +AIR F  M + G +P +F  S  + AC+ L     GKQ+
Sbjct: 69  RNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQM 128

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H  A++ G+  ++ VG +L DMY+KC   G++ D+ KVF+ M   + +SWTA+I GY + 
Sbjct: 129 HCLALKFGIGSELFVGSNLEDMYSKC---GAMFDACKVFEEMPCKDEVSWTAMIDGYSKI 185

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G   +EA+  F  MI  +V  +     S L ACG L        V++  VK G   D  V
Sbjct: 186 G-EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFV 244

Query: 426 GNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           GN+L  MY+++G ME A   F    E +N+VSY  ++D Y +    EK   +  E+   G
Sbjct: 245 GNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQG 304

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +  + +TF+SL+   ++  A+ +G Q+HA+++K  F+ +  + + L+ MY +C  +E A 
Sbjct: 305 IEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLEHAI 364

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           Q F E+ D   I+W S+++ F +HG    A++ F +M+  G+KPN IT+I++L+ CSHAG
Sbjct: 365 QAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAG 424

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+ EG  +F SM   +G+V   EHY+C++DLLGR+G L EA EFI  MP   +   W +F
Sbjct: 425 LVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGWCSF 484

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           LGACR+HGD E+GK AAE +++ +P++  A +LLSN+YA+   WE V ++R RM++ N+ 
Sbjct: 485 LGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDGNVK 544

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           K  G SW++   K H F   + SH +   IY +LD L  +IK  GY+P T+ V  ++++ 
Sbjct: 545 KLPGYSWVDVGYKTHVFGAEDWSHXRKSAIYEKLDXLLDQIKAAGYVPXTDSVPLDMDDX 604

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
            K + L +HSE+IAVAF LIS    KPI V KNLRVC DCH+AIK+IS VTGR+I++RD+
Sbjct: 605 MKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIVRDN 664

Query: 845 NRFHHIKDGKCSCNDYW 861
           +RFHH  DG CSC DYW
Sbjct: 665 SRFHHFTDGSCSCGDYW 681



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 261/498 (52%), Gaps = 14/498 (2%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D +  + ++++  +++    GK +H+LL  +   P + + N L+++YSKCG+L+ A K+F
Sbjct: 4   DTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKCGELDHALKLF 63

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
            +M  +R++VSW++MIS      K  +AI  F  M   G  P ++ FS+ IRAC++  ++
Sbjct: 64  DTM-PQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSI 122

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
            +G  ++   LK G   S++ VG  L DM+ K     + A KVF++M  K+ V WT MI 
Sbjct: 123 EMGKQMHCLALKFG-IGSELFVGSNLEDMYSKCGAMFD-ACKVFEEMPCKDEVSWTAMID 180

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
             +++G   +A+  F  MI      D+  L   + AC  L+    G+ +HS  ++ G   
Sbjct: 181 GYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFES 240

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAV 373
           D+ VG +L DMY+K    G ++ +  VF   +D    NV+S+T +I GYV++   +K  +
Sbjct: 241 DIFVGNALTDMYSKA---GDMESASNVFG--IDSECRNVVSYTCLIDGYVETEQIEK-GL 294

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            +F ++ +  + PN FTF+S++KAC N        Q++   +K     D  V + L+ MY
Sbjct: 295 SVFVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMY 354

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            + G +E A +AF+ + +   +++N++V  + ++   + A +    + D GV  +A TF 
Sbjct: 355 GKCGLLEHAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFI 414

Query: 494 SLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME- 551
           SLL+G S  G + +G      + K+ G       Y+ +I +  R   ++ A +    M  
Sbjct: 415 SLLTGCSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPF 474

Query: 552 DRNVISWTSMITGFAKHG 569
           + N   W S +     HG
Sbjct: 475 EPNAFGWCSFLGACRIHG 492



 Score =  189 bits (479), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 217/407 (53%), Gaps = 20/407 (4%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           L D   L+ V+   ++ +    GKQLH+  I  G      +   LV+MY+KC   G +D 
Sbjct: 2   LRDTNALAHVIQTYAKTKRLRRGKQLHALLICAGYTPCTFLTNHLVNMYSKC---GELDH 58

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKAC 398
           + K+FD M   N++SWTA+I+G  Q+  +  EA++ F  M I G+V P  F F+S ++AC
Sbjct: 59  ALKLFDTMPQRNLVSWTAMISGLSQN-SKFSEAIRTFCGMRICGEV-PTQFAFSSAIRAC 116

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +L    + +Q++  A+K G   +  VG++L  MY++ G M DA K FE +  K+ VS+ 
Sbjct: 117 ASLGSIEMGKQMHCLALKFGIGSELFVGSNLEDMYSKCGAMFDACKVFEEMPCKDEVSWT 176

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+D Y+K    E+A     ++ D  V    +   S L    ++ A   G  +H+ ++K 
Sbjct: 177 AMIDGYSKIGEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKL 236

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFK-EMEDRNVISWTSMITGFAKHGFAARALEI 577
           GFES+  + NAL  MYS+  ++E+A  VF  + E RNV+S+T +I G+ +     + L +
Sbjct: 237 GFESDIFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSV 296

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSM---YDEHGIVQRMEHYACMV 633
           F ++   GI+PN  T+ +++ AC++   + +G + H + M   +DE   V  +     +V
Sbjct: 297 FVELRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSI-----LV 351

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           D+ G+ G L  A++    +    ++  W + +     HG   LGK A
Sbjct: 352 DMYGKCGLLEHAIQAFDEIGDPTEI-AWNSLVSVFGQHG---LGKDA 394



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 208/417 (49%), Gaps = 20/417 (4%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            + +  +AI T   M   G  P    +S  +++C    +  +GK +H L  +  +     
Sbjct: 83  QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 142

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L  +YSKCG + +A K+F+ M  K D VSW++MI  Y   G+  +A+  F +M++ 
Sbjct: 143 VGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 201

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               +++   + + AC   +    G  ++  ++K G F+SD+ VG AL DM+ K   D+E
Sbjct: 202 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAG-DME 259

Query: 235 SAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           SA  VF   +E +N V +T +I    +       + +F+++   G  P+ FT S ++ AC
Sbjct: 260 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 319

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +       G QLH+  ++     D  V   LVDMY KC   G ++ + + FD + D   +
Sbjct: 320 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC---GLLEHAIQAFDEIGDPTEI 376

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVY 411
           +W ++++ + Q  G  K+A+K F  M+   V PN  TF S+L  C    L++  + +  Y
Sbjct: 377 AWNSLVSVFGQH-GLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL-DYFY 434

Query: 412 ----THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
               T+ V  G     CV    I +  R+GR+++A++    + FE N   + + + A
Sbjct: 435 SMDKTYGVVPGEEHYSCV----IDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 487



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 84/330 (25%), Positives = 155/330 (46%), Gaps = 17/330 (5%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M  +    D       L +C   +    G+ VHS + +   E +  + 
Sbjct: 186 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 245

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L  +YSK GD+  A+ +F      R++VS++ +I  YV   +    + +FVE+   G 
Sbjct: 246 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 305

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PNE+ FS++I+AC+N   +  G  ++  ++K   FD D  V   L+DM+ K  + LE A
Sbjct: 306 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGL-LEHA 363

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            + FD++ +   + W  +++   Q G  +DAI+ F  M+  G  P+  T   +++ CS  
Sbjct: 364 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKFFERMVDRGVKPNAITFISLLTGCSHA 423

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM-LDH 350
            L   G       +    ++D   G    + +  C +D     G + ++++  +RM  + 
Sbjct: 424 GLVEEG-------LDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEP 476

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           N   W + +      G  DKE  KL ++ +
Sbjct: 477 NAFGWCSFLGACRIHG--DKEMGKLAAEKL 504


>gi|359475558|ref|XP_003631701.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Vitis vinifera]
          Length = 848

 Score =  526 bits (1356), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 291/795 (36%), Positives = 468/795 (58%), Gaps = 20/795 (2%)

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN 130
           Q   + ++D ++ L  SC ++    L K +H+LL  S    ++ I   L++LY+  GD++
Sbjct: 70  QPAKNEEID-FNSLFDSCTKTL---LAKRLHALLVVSGKIQSNFISIRLVNLYASLGDVS 125

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRA 189
            +   F  +  ++D+ +W+SMIS+YV  G   +AI  F ++L +  F  + Y F  V++A
Sbjct: 126 LSRGTFDQI-QRKDVYTWNSMISAYVRNGHFREAIDCFYQLLLVTKFQADFYTFPPVLKA 184

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNT 248
           C   + +  G  I+ ++ K G F  DV V  +LI M+ + G V +  A  +FD M  ++ 
Sbjct: 185 C---QTLVDGRKIHCWVFKLG-FQWDVFVAASLIHMYSRFGFVGI--ARSLFDDMPFRDM 238

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
             W  MI+   Q G    A+ +  +M L G   D  T++ ++  C++L   ++   +H +
Sbjct: 239 GSWNAMISGLIQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLY 298

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I+ GL  ++ V  +L++MYAK    G++ D++KVF +M   +V+SW +II  Y Q+   
Sbjct: 299 VIKHGLEFELFVSNALINMYAKF---GNLGDAQKVFQQMFLRDVVSWNSIIAAYEQNDD- 354

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV-GN 427
              A   F  M    + P+  T  S+        D   +  V+   ++RG  ++  V GN
Sbjct: 355 PVTARGFFFKMQLNGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGN 414

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED-TGVG 486
           +++ MYA+ G ++ A K F  +  K++VS+NT++  Y +N  + +A E+   +E+   + 
Sbjct: 415 AVMDMYAKLGVIDSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIK 474

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            +  T+ S+L+  + +GA+ +G +IH  +IK+    +  +   LI +Y +C  +  A  +
Sbjct: 475 LNQGTWVSILAAYAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKCGRLVDAMCL 534

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F ++   + + W ++I+    HG   +AL++F +M  +G+KP+ +T+I++LSACSH+GL+
Sbjct: 535 FYQVPRESSVPWNAIISCHGIHGHGEKALKLFREMQDEGVKPDHVTFISLLSACSHSGLV 594

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            EG K F  +  E+GI   ++HY CMVDLLGR+G L  A +FI+ MPL  D  +W   LG
Sbjct: 595 DEG-KWFFHLMQEYGIKPSLKHYGCMVDLLGRAGFLEMAYDFIKDMPLHPDASIWGALLG 653

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
           ACR+HG+ ELGK A++ + E D ++   ++LLSN+YA+ G WE V  +R   +ER L K 
Sbjct: 654 ACRIHGNIELGKFASDRLFEVDSENVGYYVLLSNIYANVGKWEGVDKVRSLARERGLKKT 713

Query: 727 AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
            G S IE + +V  F+ G  SHPK  EIYAEL  L  K+K  GY+PD +FVL ++EE++K
Sbjct: 714 PGWSSIEVNRRVDIFYTGNQSHPKCKEIYAELRILTAKMKSLGYIPDYSFVLQDVEEDEK 773

Query: 787 VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
              L  HSE++A+AFG+IST     IR+FKNLRVCGDCH A K+IS +T REIV+RDS R
Sbjct: 774 EHILTSHSERLAIAFGIISTPPKSAIRIFKNLRVCGDCHNATKFISRITEREIVVRDSKR 833

Query: 847 FHHIKDGKCSCNDYW 861
           FHH K+G CSC DYW
Sbjct: 834 FHHFKNGICSCGDYW 848



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 104/346 (30%), Positives = 186/346 (53%), Gaps = 7/346 (2%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G   +A+  LD M  +G + D  T + +L  C +  +     L+H  + +  LE   
Sbjct: 249 IQNGNAAQALDVLDEMRLEGINMDSVTVASILPVCAQLGDISTATLIHLYVIKHGLEFEL 308

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + N+LI++Y+K G+L +A K+F+ M   RD+VSW+S+I++Y      V A   F +M  
Sbjct: 309 FVSNALINMYAKFGNLGDAQKVFQQM-FLRDVVSWNSIIAAYEQNDDPVTARGFFFKMQL 367

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  P+     ++    + + +      ++GF+++ G+    V +G A++DM+ K  V +
Sbjct: 368 NGLEPDLLTLVSLASIAAQSRDYKNSRSVHGFIMRRGWLMEAVVIGNAVMDMYAKLGV-I 426

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSA 292
           +SA+KVF+ +  K+ V W  +I+  TQ G   +AI ++  M     +  ++ T   +++A
Sbjct: 427 DSAHKVFNLIPVKDVVSWNTLISGYTQNGLASEAIEVYRMMEECREIKLNQGTWVSILAA 486

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + +     G ++H   I+T L LDV VG  L+D+Y KC   G + D+  +F ++   + 
Sbjct: 487 YAHVGALQQGMRIHGHLIKTNLHLDVFVGTCLIDLYGKC---GRLVDAMCLFYQVPRESS 543

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           + W AII+ +   G  +K A+KLF +M    V P+H TF S+L AC
Sbjct: 544 VPWNAIISCHGIHGHGEK-ALKLFREMQDEGVKPDHVTFISLLSAC 588


>gi|125529330|gb|EAY77444.1| hypothetical protein OsI_05438 [Oryza sativa Indica Group]
          Length = 813

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 291/750 (38%), Positives = 434/750 (57%), Gaps = 22/750 (2%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV--DAIHMFVEMLELGFCPNEYCFS 184
           G L+ A+ +F  + +  D+ +++ +I +Y +       D +H++  ML     PN Y F 
Sbjct: 71  GHLSRAHHLFDQIPSP-DVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
             ++ACS   +   G  I+   +  G   +D+ V  AL+DM+VK +  L  A  +F  M 
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAG-LQADLFVSTALLDMYVKCAC-LPDAAHIFATMP 187

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIR--LFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
            ++ V W  M+      G    A+   L + M +    P+  TL  ++   ++      G
Sbjct: 188 ARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQG 247

Query: 303 KQLHSWAIR----------TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
             +H++ IR          + L   V +G +L+DMYAKC   GS+  +R+VFD M   N 
Sbjct: 248 TSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKC---GSLLYARRVFDAMPARNE 304

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++W+A+I G+V    R  +A  LF  M+ QG    +  + AS L+AC +L    + EQ++
Sbjct: 305 VTWSALIGGFVLCS-RMTQAFLLFKAMLAQGLCFLSPTSIASALRACASLDHLRMGEQLH 363

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
               K G   D   GNSL+SMYA++G ++ A   F+ +  K+ VSY+ +V  Y +N  +E
Sbjct: 364 ALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSYSALVSGYVQNGRAE 423

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +AF +  +++   V   A T  SL+   S + A+  G   H  +I  G  S   I NALI
Sbjct: 424 EAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASETSICNALI 483

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C  ++ + QVF  M  R+++SW +MI G+  HG    A  +F +M   G  P+G+
Sbjct: 484 DMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLEMNNLGFPPDGV 543

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+I +LSACSH+GL+ EG   F  M   +G+  RMEHY CMVDLL R G L EA EFI+S
Sbjct: 544 TFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLSRGGFLDEAYEFIQS 603

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MPL ADV VW   LGACRV+ + +LGK  + MI E  P+     +LLSN+Y++AG ++  
Sbjct: 604 MPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVLLSNIYSAAGRFDEA 663

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           A +R   K +   K  GCSWIE +  +H F  G+ SHP++ EIY ELD + + IK+ GY 
Sbjct: 664 AEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRELDNILVGIKKLGYQ 723

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PDT+FVL +LEEE+K + L  HSEK+A+A+G++S S+ K I V KNLRVCGDCHT IK+I
Sbjct: 724 PDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKNLRVCGDCHTVIKHI 783

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S++  R I++RD+NRFHH K+G+CSC D+W
Sbjct: 784 SLLKRRAIIVRDANRFHHFKNGQCSCGDFW 813



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 141/508 (27%), Positives = 255/508 (50%), Gaps = 34/508 (6%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+   LK+C    + H G+ +H     + L+ +  +  +L+ +Y KC  L +A  I
Sbjct: 123 PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 182

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAI-HMFVEMLELG-FCPNEYCFSAVIRACSNT 193
           F +M   RD+V+W++M++ Y + G    A+ H+    +++    PN     A++   +  
Sbjct: 183 FATM-PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 241

Query: 194 ENVAIGHIIYGFLLK-CGYFDSD--------VCVGCALIDMFVKGSVDLESAYKVFDKMT 244
             +A G  ++ + ++ C + + +        V +G AL+DM+ K    L  A +VFD M 
Sbjct: 242 GALAQGTSVHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCG-SLLYARRVFDAMP 300

Query: 245 EKNTVGWTLMI------TRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSEL 296
            +N V W+ +I      +R TQ      A  LF  M+  G  FL    +++  + AC+ L
Sbjct: 301 ARNEVTWSALIGGFVLCSRMTQ------AFLLFKAMLAQGLCFLSPT-SIASALRACASL 353

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           +    G+QLH+   ++G+  D+  G SL+ MYAK    G +D +  +FD M   + +S++
Sbjct: 354 DHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKA---GLIDQAIALFDEMAVKDTVSYS 410

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+++GYVQ+ GR +EA  +F  M    V P+  T  S++ AC +L         +   + 
Sbjct: 411 ALVSGYVQN-GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVII 469

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           RG A +  + N+LI MYA+ GR++ +R+ F  +  +++VS+NTM+  Y  +   ++A  L
Sbjct: 470 RGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATAL 529

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYS 535
             E+ + G      TF  LLS  S  G + +G+   H      G       Y  ++ + S
Sbjct: 530 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHYICMVDLLS 589

Query: 536 RCANVEAAFQVFKEMEDR-NVISWTSMI 562
           R   ++ A++  + M  R +V  W +++
Sbjct: 590 RGGFLDEAYEFIQSMPLRADVRVWVALL 617



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR ++A      M      PD  T   L+ +C        G+  H  +    L   
Sbjct: 416 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 475

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I N+LI +Y+KCG ++ + ++F  M + RDIVSW++MI+ Y   G   +A  +F+EM 
Sbjct: 476 TSICNALIDMYAKCGRIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMN 534

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG----HII---YGFLLKCGYFDSDVCVGCALIDM 225
            LGF P+   F  ++ ACS++  V  G    H++   YG   +  ++   +C    ++D+
Sbjct: 535 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMRHGYGLTPRMEHY---IC----MVDL 587

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
             +G   L+ AY+    M  +  V  W  ++  C
Sbjct: 588 LSRGGF-LDEAYEFIQSMPLRADVRVWVALLGAC 620



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/244 (22%), Positives = 111/244 (45%), Gaps = 14/244 (5%)

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA--FELLHEIEDTGVGTSAYTFA 493
           SG +  A   F+ +   ++ +YN ++ AY+ +  +  A    L   +    V  + YTF 
Sbjct: 70  SGHLSRAHHLFDQIPSPDVRTYNDLIRAYSSSSPTAAADGLHLYRRMLRHRVAPNNYTFP 129

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
             L   S++     G  IH   I +G +++  +  AL+ MY +CA +  A  +F  M  R
Sbjct: 130 FALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHIFATMPAR 189

Query: 554 NVISWTSMITGFAKHGFAARALE--IFYKMLADGIKPNGITYIAVLSACSHAGLISEG-- 609
           ++++W +M+ G+A HG    A+   +  +M    ++PN  T +A+L   +  G +++G  
Sbjct: 190 DLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQGALAQGTS 249

Query: 610 ---WKHFRSMYDEHGIVQRMEH----YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
              ++    ++       ++         ++D+  + GSL  A     +MP   +V  W 
Sbjct: 250 VHAYRIRACLHSNRNSKSKLTDGVLLGTALLDMYAKCGSLLYARRVFDAMPARNEV-TWS 308

Query: 663 TFLG 666
             +G
Sbjct: 309 ALIG 312


>gi|296082505|emb|CBI21510.3| unnamed protein product [Vitis vinifera]
          Length = 746

 Score =  526 bits (1355), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 280/704 (39%), Positives = 432/704 (61%), Gaps = 10/704 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P    ++ LL+  I        K++H  +  S L+ ++ + N LI++ SK   ++ A  +
Sbjct: 47  PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 106

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTE 194
           F  M +K ++++WSSM+S Y  +G   +A+ +FV++  + G  PNE+  ++VIRAC+   
Sbjct: 107 FDKMPHK-NLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 165

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
            V  G  ++GF+++ G FD DV VG +LID + K   ++E A  VFD+++EK  V WT +
Sbjct: 166 VVEKGAQLHGFVVRSG-FDQDVYVGTSLIDFYSKNG-NIEEARLVFDQLSEKTAVTWTTI 223

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I   T+ G    ++ LF  M  +  +PDR+ +S V+SACS LE    GKQ+H++ +R G 
Sbjct: 224 IAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT 283

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            +DV V   L+D Y KC     V   RK+FD+M+  N++SWT +I+GY+Q+   D EA+K
Sbjct: 284 EMDVSVVNVLIDFYTKCN---RVKAGRKLFDQMVVKNIISWTTMISGYMQNS-FDWEAMK 339

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +M +    P+ F   SVL +CG+        QV+ + +K     D+ V N LI MYA
Sbjct: 340 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYA 399

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           +S  + DA+K F+ + E+N++SYN M++ Y+      +A EL HE+       + +TFA+
Sbjct: 400 KSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLQKPNEFTFAA 459

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           L++ AS++ ++  G+Q H +++K G +    + NAL+ MY++C ++E A ++F     R+
Sbjct: 460 LITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNSSIWRD 519

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V+ W SMI+  A+HG A  AL +F +M+ +GI+PN +T++AVLSACSHAG + +G  HF 
Sbjct: 520 VVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGRVEDGLNHFN 579

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM    GI    EHYAC+V LLGRSG L EA EFI  MP+    +VWR+ L ACR+ G+ 
Sbjct: 580 SM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLLSACRIAGNV 638

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           ELGK+AAEM +  DP+D  ++ILLSN++AS G W  V  +R RM    ++KE G SWIE 
Sbjct: 639 ELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVKEPGRSWIEV 698

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           +NKV+ F   +T+H +  +I + LD L   IK  GY+PD   +L
Sbjct: 699 NNKVNVFIARDTTH-READIGSVLDILIQHIKGAGYVPDATALL 741



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 158/506 (31%), Positives = 271/506 (53%), Gaps = 20/506 (3%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           +DL  + G HP+    + ++++C +      G  +H  + RS  + +  +  SLI  YSK
Sbjct: 139 VDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSK 198

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
            G++ EA  +F  +  K   V+W+++I+ Y   G+   ++ +F +M E    P+ Y  S+
Sbjct: 199 NGNIEEARLVFDQLSEK-TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSS 257

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+ ACS  E +  G  I+ ++L+ G  + DV V   LID + K +  +++  K+FD+M  
Sbjct: 258 VLSACSMLEFLEGGKQIHAYVLRRGT-EMDVSVVNVLIDFYTKCN-RVKAGRKLFDQMVV 315

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN + WT MI+   Q     +A++LF +M   G+ PD F  + V+++C   E    G+Q+
Sbjct: 316 KNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQV 375

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H++ I+  L  D  V   L+DMYAK  +   + D++KVFD M + NV+S+ A+I GY  S
Sbjct: 376 HAYTIKANLESDEFVKNGLIDMYAKSNL---LIDAKKVFDVMAEQNVISYNAMIEGY-SS 431

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC- 424
             +  EA++LF +M      PN FTFA+++ A  NL      +Q +   VK G  LD C 
Sbjct: 432 QEKLSEALELFHEMRVRLQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMG--LDFCP 489

Query: 425 -VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N+L+ MYA+ G +E+ARK F S   +++V +N+M+  +A++  +E+A  +  E+   
Sbjct: 490 FVTNALVDMYAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKE 549

Query: 484 GVGTSAYTFASLLSGASSIGAIGKG----EQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           G+  +  TF ++LS  S  G +  G      +    IK G E   C+    +S+  R   
Sbjct: 550 GIQPNYVTFVAVLSACSHAGRVEDGLNHFNSMPGFGIKPGTEHYACV----VSLLGRSGK 605

Query: 540 VEAAFQVFKEME-DRNVISWTSMITG 564
           +  A +  ++M  +   I W S+++ 
Sbjct: 606 LFEAKEFIEKMPIEPAAIVWRSLLSA 631


>gi|302815813|ref|XP_002989587.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
 gi|300142765|gb|EFJ09463.1| hypothetical protein SELMODRAFT_130050 [Selaginella moellendorffii]
          Length = 736

 Score =  526 bits (1354), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 259/745 (34%), Positives = 446/745 (59%), Gaps = 14/745 (1%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y KCG + +A  +F ++ +  + VSW+ +++++   G   +A+  +  M+  G  P+  
Sbjct: 1   MYGKCGSVADALAVFHAIEHP-NSVSWTLIVAAFARNGHYREALGYYRRMVLEGLRPDGA 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F   I  CS+++++  G +++  +L+    + D+ +G ALI M+ +   DLE A K FD
Sbjct: 60  MFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDIILGTALITMYARCR-DLELARKTFD 118

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL---SGFLPDRFTLSGVVSACSELEL 298
           +M +K  V W  +I   ++ G  R A++++ DM+     G  PD  T S  + AC+ +  
Sbjct: 119 EMGKKTLVTWNALIAGYSRNGDHRGALKIYQDMVSKSPEGMKPDAITFSSALYACTVVGD 178

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
            + G+++ +  + +G A D  V  +L++MY+KC   GS++ +RKVFDR+ + +V++W  +
Sbjct: 179 ISQGREIEARTVASGYASDSIVQNALINMYSKC---GSLESARKVFDRLKNRDVIAWNTM 235

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I+GY + G    +A++LF  M      PN  TF  +L AC NL D      ++    + G
Sbjct: 236 ISGYAKQGAA-TQALELFQRMGPNDPKPNVVTFIGLLTACTNLEDLEQGRAIHRKVREDG 294

Query: 419 RALDDCVGNSLISMYAR-SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
              D  +GN L++MY + S  +E+AR+ FE +  ++++++N ++ AY +   ++ A ++ 
Sbjct: 295 YESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITWNILIVAYVQYGQAKDALDIF 354

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            +++   V  +  T +++LS  + +GA  +G+ +HA I     +++  + N+L++MY+RC
Sbjct: 355 KQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRCKADVVLENSLMNMYNRC 414

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            +++    VF  + D++++SW+++I  +A+HG +   LE F+++L +G+  + +T ++ L
Sbjct: 415 GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGHSRTGLEHFWELLQEGLAADDVTMVSTL 474

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           SACSH G++ EG + F SM  +HG+     H+ CMVDLL R+G L  A   I  MP   D
Sbjct: 475 SACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFLCMVDLLSRAGRLEAAENLIHDMPFLPD 534

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI-LLSNLYASAGHWEYVANIRK 716
            + W + L  C++H DT+     A+ + E + +D  + + LLSN+YA AG W+ V   R 
Sbjct: 535 AVAWTSLLSGCKLHNDTKRAARVADKLFELESEDEHSTVTLLSNVYAEAGRWDDVRKTRN 594

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
           R   R   K  GCS+IE ++ VH+F  G+ SHP+   I AE+ +L+ ++K+ GY+PD   
Sbjct: 595 RRAAR---KNPGCSYIEINDTVHEFVAGDKSHPEEELIAAEIKRLSKQMKDAGYVPDMRM 651

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH ++EE+K Q L  HSEK+A+A+GLIST    P+ + KNLR C DCH A K+IS + G
Sbjct: 652 VLHNVKEEEKEQMLCYHSEKLAIAYGLISTPPGTPLHIVKNLRACVDCHAAAKFISRIVG 711

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R+IV+RDS RFHH ++G CSC DYW
Sbjct: 712 RKIVVRDSTRFHHFENGSCSCKDYW 736



 Score =  253 bits (646), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 162/535 (30%), Positives = 285/535 (53%), Gaps = 16/535 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+     M  +G  PD   + + +  C  S++   G+L+H+++  ++L    +I
Sbjct: 36  NGHYREALGYYRRMVLEGLRPDGAMFVVAIGVCSSSKDLKQGQLLHAMILETRLLEFDII 95

Query: 116 LNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           L + LI++Y++C DL  A K F  MG K+ +V+W+++I+ Y   G    A+ ++ +M+  
Sbjct: 96  LGTALITMYARCRDLELARKTFDEMG-KKTLVTWNALIAGYSRNGDHRGALKIYQDMVSK 154

Query: 175 ---GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G  P+   FS+ + AC+   +++ G  I    +  GY  SD  V  ALI+M+ K GS
Sbjct: 155 SPEGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYA-SDSIVQNALINMYSKCGS 213

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             LESA KVFD++  ++ + W  MI+   + G    A+ LF  M  +   P+  T  G++
Sbjct: 214 --LESARKVFDRLKNRDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLL 271

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +AC+ LE    G+ +H      G   D+ +G  L++MY KC+   S++++R+VF+RM   
Sbjct: 272 TACTNLEDLEQGRAIHRKVREDGYESDLVIGNVLLNMYTKCS--SSLEEARQVFERMRTR 329

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V++W  +I  YVQ  G+ K+A+ +F  M    VAPN  T ++VL AC  L      + V
Sbjct: 330 DVITWNILIVAYVQY-GQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAV 388

Query: 411 YTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +   +  GR   D V  NSL++MY R G ++D    F ++ +K+LVS++T++ AYA++ +
Sbjct: 389 HA-LIASGRCKADVVLENSLMNMYNRCGSLDDTVGVFAAIRDKSLVSWSTLIAAYAQHGH 447

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYN 528
           S    E   E+   G+     T  S LS  S  G + +G Q    ++   G   ++  + 
Sbjct: 448 SRTGLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGVQTFLSMVGDHGLAPDYRHFL 507

Query: 529 ALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
            ++ + SR   +EAA  +  +M    + ++WTS+++G   H    RA  +  K+ 
Sbjct: 508 CMVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLF 562



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 131/433 (30%), Positives = 224/433 (51%), Gaps = 19/433 (4%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           +G  PD  T+S  L +C    +   G+ + +    S    +S++ N+LI++YSKCG L  
Sbjct: 157 EGMKPDAITFSSALYACTVVGDISQGREIEARTVASGYASDSIVQNALINMYSKCGSLES 216

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A K+F  + N RD+++W++MIS Y  +G    A+ +F  M      PN   F  ++ AC+
Sbjct: 217 ARKVFDRLKN-RDVIAWNTMISGYAKQGAATQALELFQRMGPNDPKPNVVTFIGLLTACT 275

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
           N E++  G  I+  + + GY +SD+ +G  L++M+ K S  LE A +VF++M  ++ + W
Sbjct: 276 NLEDLEQGRAIHRKVREDGY-ESDLVIGNVLLNMYTKCSSSLEEARQVFERMRTRDVITW 334

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            ++I    Q G  +DA+ +F  M L    P+  TLS V+SAC+ L     GK +H+    
Sbjct: 335 NILIVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIAS 394

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
                DV +  SL++MY +C   GS+DD+  VF  + D +++SW+ +I  Y Q  G  + 
Sbjct: 395 GRCKADVVLENSLMNMYNRC---GSLDDTVGVFAAIRDKSLVSWSTLIAAYAQH-GHSRT 450

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAV-KRGRALDDCVGNS 428
            ++ F +++Q  +A +  T  S L AC  G +L   V  Q +   V   G A D      
Sbjct: 451 GLEHFWELLQEGLAADDVTMVSTLSACSHGGMLKEGV--QTFLSMVGDHGLAPDYRHFLC 508

Query: 429 LISMYARSGRMEDARKAFESL-FEKNLVSYNTMV-------DAYAKNLNSEKAFELLHEI 480
           ++ + +R+GR+E A      + F  + V++ +++       D       ++K FEL  E 
Sbjct: 509 MVDLLSRAGRLEAAENLIHDMPFLPDAVAWTSLLSGCKLHNDTKRAARVADKLFELESED 568

Query: 481 EDTGVGTSAYTFA 493
           E + V   +  +A
Sbjct: 569 EHSTVTLLSNVYA 581



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 104/212 (49%), Gaps = 7/212 (3%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ ++  G+ + A+     M  +   P+  T S +L +C        GK VH+L+   + 
Sbjct: 338 IVAYVQYGQAKDALDIFKQMQLENVAPNEITLSNVLSACAVLGAKRQGKAVHALIASGRC 397

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + + V+ NSL+++Y++CG L++   +F ++ +K  +VSWS++I++Y   G     +  F 
Sbjct: 398 KADVVLENSLMNMYNRCGSLDDTVGVFAAIRDK-SLVSWSTLIAAYAQHGHSRTGLEHFW 456

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG--YFDSDVCVGCALIDMFV 227
           E+L+ G   ++    + + ACS+   +  G  +  FL   G      D      ++D+  
Sbjct: 457 ELLQEGLAADDVTMVSTLSACSHGGMLKEG--VQTFLSMVGDHGLAPDYRHFLCMVDLLS 514

Query: 228 KGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           +    LE+A  +   M    + V WT +++ C
Sbjct: 515 RAG-RLEAAENLIHDMPFLPDAVAWTSLLSGC 545


>gi|413943926|gb|AFW76575.1| hypothetical protein ZEAMMB73_444227 [Zea mays]
          Length = 869

 Score =  525 bits (1353), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 296/809 (36%), Positives = 465/809 (57%), Gaps = 43/809 (5%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L+S I  R+ H   L   LL      P   + N+L++ Y++CGDL  A  +F +M + RD
Sbjct: 72  LRSLIAVRSIHGAALRRDLL--HGFTP--AVANALLTAYARCGDLTAALALFNAMPS-RD 126

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN-TENVAIGHIIY 203
            V+++S+I++     + + A+    +ML  G   + +   +V+ ACS+  E++ +G   +
Sbjct: 127 AVTFNSLIAALCLFRRWLPALDALRDMLLEGHPLSSFTLVSVLLACSHLAEDLRLGREAH 186

Query: 204 GFLLKCGYFDSDVCVGC-ALIDMFVK-GSVDLESAYKVFDKMTEKNTVG-----WTLMIT 256
            F LK G+ D D      AL+ M+ + G VD   A  +F  +   ++ G     W  M++
Sbjct: 187 AFALKNGFLDGDERFAFNALLSMYARLGLVD--DAQMLFGSVDTTDSPGGGVVTWNTMVS 244

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR-TGLA 315
              Q G   +AI +  DM+  G  PD  T +  + ACS+LE+ + G+++H++ ++ + LA
Sbjct: 245 LLVQSGRCGEAIEVIYDMVARGVRPDGITFASALPACSQLEMLSLGREMHAYVLKDSDLA 304

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMS-WTAIITGYVQSGGRDKEAV 373
            +  V  +LVDMYA       V  +R+VFD +   H  +  W A++ GY Q+G  D+EA+
Sbjct: 305 ANSFVASALVDMYAS---HERVGVARRVFDMVPGGHRQLGLWNAMVCGYAQAG-MDEEAL 360

Query: 374 KLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +LF+ M  +  V P+  T A VL AC         E V+ + +KRG A +  V N+L+ +
Sbjct: 361 ELFARMEAEAGVVPSETTIAGVLPACARSETFAGKEAVHGYVLKRGMADNPFVQNALMDL 420

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA--- 489
           YAR G ME AR  F ++  +++VS+NT++       +   AF+L+ E++  G  T A   
Sbjct: 421 YARLGDMEAARWIFAAIEPRDVVSWNTLITGCVVQGHIHDAFQLVREMQQQGRFTDATTE 480

Query: 490 ---------------YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
                           T  +LL G + + A  KG++IH   ++   +S+  + +AL+ MY
Sbjct: 481 DGIAGTDEEPVVPNNVTLMTLLPGCAMLAAPAKGKEIHGYAMRHALDSDIAVGSALVDMY 540

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM-LADGIKPNGITY 593
           ++C  +  +  VF  +  RNVI+W  +I  +  HG    A+ +F +M +++  KPN +T+
Sbjct: 541 AKCGCLALSRAVFDRLPKRNVITWNVLIMAYGMHGLGDEAIALFDRMVMSNEAKPNEVTF 600

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM- 652
           IA L+ACSH+G++  G + F SM   HG+    + +AC VD+LGR+G L EA   I SM 
Sbjct: 601 IAALAACSHSGMVDRGMELFHSMKRNHGVQPTPDLHACAVDILGRAGRLDEAYSIITSME 660

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P    V  W +FLGACR+H +  LG+ AAE + + +P + + ++LL N+Y++AG WE  +
Sbjct: 661 PGEQQVSAWSSFLGACRLHRNVPLGEIAAERLFQLEPDEASHYVLLCNIYSAAGLWEKSS 720

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R RM++R + KE GCSWIE D  +H+F  GE++HP++  ++A +D L  +++  GY P
Sbjct: 721 EVRNRMRQRGVSKEPGCSWIELDGVIHRFMAGESAHPESTLVHAHMDALWERMRNQGYTP 780

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           DT+ VLH++EE +K   L  HSEK+A+AFGL+ T     IRV KNLRVC DCH A K+IS
Sbjct: 781 DTSSVLHDIEESEKAAILRYHSEKLAIAFGLLRTPPGATIRVAKNLRVCNDCHEAAKFIS 840

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            + GREIVLRD  RFHH  DG CSC DYW
Sbjct: 841 RMVGREIVLRDVRRFHHFVDGACSCGDYW 869


>gi|414881621|tpg|DAA58752.1| TPA: hypothetical protein ZEAMMB73_723286 [Zea mays]
          Length = 1058

 Score =  525 bits (1351), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/752 (37%), Positives = 456/752 (60%), Gaps = 14/752 (1%)

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV---EMLE 173
            ++L+S +++ G  +EA  IF S+  +++ V+ + +I   V +    +A+ +FV     ++
Sbjct: 314  SALVSAFARHGLTDEAKDIFLSL-KQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVD 372

Query: 174  LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            +         SA+     + E + IG +++G +L+ G  D  + V   L++M+ K    +
Sbjct: 373  VNADTYVVLLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGA-I 431

Query: 234  ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            ESA K+F  M   + + W  +I+   Q G   +A+  +  M  S   P  F L   +S+C
Sbjct: 432  ESASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSC 491

Query: 294  SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
            + L+L T+G+Q+H  A++ GL LD  V   LV MY +C   G++ D  KVF+ M +H+ +
Sbjct: 492  AGLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGEC---GAMSDYWKVFNSMAEHDEV 548

Query: 354  SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
            SW  ++     S     E VK+F++M++G + PN  TF ++L A   L    + +QV+  
Sbjct: 549  SWNTMMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAA 608

Query: 414  AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEK 472
             +K G   D+ V N+LIS YA+SG M      F ++ ++ + +S+N+M+  Y  N N ++
Sbjct: 609  VMKHGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQE 668

Query: 473  AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
            A + +  +  +G      TF+ +L+  +S+ A+ +G ++HA  I+S  ES+  + +AL+ 
Sbjct: 669  AMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVD 728

Query: 533  MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
            MYS+C  V+ A ++F  M  RN  SW SMI+G+A+HG   +A+EIF +ML     P+ +T
Sbjct: 729  MYSKCGRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVT 788

Query: 593  YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            +++VLSACSHAGL+  G ++F  M D HGI+ ++EHY+C++DLLGR+G + +  E+I+ M
Sbjct: 789  FVSVLSACSHAGLVERGLEYFEMMPD-HGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRM 847

Query: 653  PLSADVLVWRTFLGACRVHGD---TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            P+  + L+WRT L ACR   D    +LG+ A+ ++LE +PQ+P  ++L SN +A+ G WE
Sbjct: 848  PIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEIEPQNPVNYVLASNFHAATGMWE 907

Query: 710  YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
              A  R  M++    KEAG SW+  ++ VH F  G+ SHP T EIY +L+ L   I+  G
Sbjct: 908  DTAKARTAMRQATEKKEAGRSWVTLNDGVHTFIAGDRSHPNTKEIYEKLNFLIQNIRNAG 967

Query: 770  YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
            Y+P T + L++LEEE K + L  HSEK+A+AF +++ S S PIR+ KNLRVCGDCH A +
Sbjct: 968  YVPLTEYALYDLEEENKEELLSYHSEKLAIAF-VLTRSSSGPIRIMKNLRVCGDCHIAFR 1026

Query: 830  YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            YIS +  R+I+LRDS RFHH KDGKCSC DYW
Sbjct: 1027 YISQMISRQIILRDSIRFHHFKDGKCSCGDYW 1058



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 179/661 (27%), Positives = 321/661 (48%), Gaps = 42/661 (6%)

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLG--KLVHSLLTRSKLEPNSVILNSLISLYSKC- 126
            Q G  P   T+  LL++C       LG    VH L+++++   N+ + N+LIS+Y  C 
Sbjct: 157 VQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEYASNTTVCNALISMYGSCT 216

Query: 127 -GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML----ELGFCPNEY 181
            G    A ++F      RD+++W++++S Y  +G       +F +M      +   P E+
Sbjct: 217 VGPPILAQRVFDGT-PIRDLITWNALMSVYAKKGDVASTFTLFKDMQRGDSRIQLRPTEH 275

Query: 182 CFSAVI-RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
            F ++I  A  ++ + A+   +  ++LK G   SD+ VG AL+  F +  +  E A  +F
Sbjct: 276 TFGSLITAASLSSGSSAVLDQVLVWVLKSG-CSSDLYVGSALVSAFARHGLTDE-AKDIF 333

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLF------LDMILSGFLPDRFTLSGVVSACS 294
             + +KN V    +I    +     +A+++F      +D+    ++     LS +     
Sbjct: 334 LSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYV---VLLSALAEYSI 390

Query: 295 ELELFTSGKQLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             E    G+ +H   +RTGL  L + V   LV+MYAKC   G+++ + K+F  M   + +
Sbjct: 391 SEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKC---GAIESASKIFQLMEATDRI 447

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW  II+   Q+G  + EAV  +S M Q  ++P++F   S L +C  L      +QV+  
Sbjct: 448 SWNTIISALDQNGNCE-EAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTAGQQVHCD 506

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS-EK 472
           AVK G  LD  V N L+ MY   G M D  K F S+ E + VS+NTM+   A +     +
Sbjct: 507 AVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNTMMGVMASSQTPISE 566

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
             ++ + +   G+  +  TF +LL+  S +  +  G+Q+HA ++K G   ++ + NALIS
Sbjct: 567 IVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNALIS 626

Query: 533 MYSRCANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            Y++  ++ +   +F  M D R+ ISW SMI+G+  +G    A++  + M+  G   +  
Sbjct: 627 CYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIMDCC 686

Query: 592 TYIAVLSACSHAGLISEGWK----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           T+  +L+AC+    +  G +      RS  +   +V+     + +VD+  + G +  A +
Sbjct: 687 TFSIILNACASVAALERGMELHAFGIRSHLESDVVVE-----SALVDMYSKCGRVDYASK 741

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ-DPQDPAAHILLSNLYASAG 706
              SM    +   W + +     HG   LG+ A E+  E    ++   H+   ++ ++  
Sbjct: 742 LFNSMT-QRNEFSWNSMISGYARHG---LGRKAIEIFEEMLRSRESPDHVTFVSVLSACS 797

Query: 707 H 707
           H
Sbjct: 798 H 798



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 145/596 (24%), Positives = 282/596 (47%), Gaps = 31/596 (5%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  L +  L  +  + N L++ Y+K   L  A+++F  M  +R+ VSW+ ++S YV  G
Sbjct: 83  LHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEM-PERNAVSWTCLVSGYVLHG 141

Query: 160 KQVDAIHMFVEML---ELGFCPNEYCFSAVIRACSN--TENVAIGHIIYGFLLKCGYFDS 214
              +A  +F  ML   + G  P  + F  ++RAC +   + +     ++G + K  Y  S
Sbjct: 142 IAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVSKTEY-AS 200

Query: 215 DVCVGCALIDMFVKGSVDLES-AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +  V  ALI M+   +V     A +VFD    ++ + W  +++   + G       LF D
Sbjct: 201 NTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVASTFTLFKD 260

Query: 274 MILSG----FLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMY 328
           M          P   T   +++A S     ++   Q+  W +++G + D+ VG +LV  +
Sbjct: 261 MQRGDSRIQLRPTEHTFGSLITAASLSSGSSAVLDQVLVWVLKSGCSSDLYVGSALVSAF 320

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           A+    G  D+++ +F  +   N ++   +I G V+     +EAVK+F    +  V  N 
Sbjct: 321 AR---HGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQ-DFSEEAVKIFVG-TRNTVDVNA 375

Query: 389 FTFASVLKACGNLLDSNVAEQ-------VYTHAVKRGRA-LDDCVGNSLISMYARSGRME 440
            T+  +L A   L + +++E+       V+ H ++ G   L   V N L++MYA+ G +E
Sbjct: 376 DTYVVLLSA---LAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIE 432

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A K F+ +   + +S+NT++ A  +N N E+A      +  + +  S +   S LS  +
Sbjct: 433 SASKIFQLMEATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCA 492

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            +  +  G+Q+H   +K G + +  + N L+ MY  C  +   ++VF  M + + +SW +
Sbjct: 493 GLKLLTAGQQVHCDAVKWGLDLDTSVSNVLVKMYGECGAMSDYWKVFNSMAEHDEVSWNT 552

Query: 561 MITGFAKHGFA-ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           M+   A      +  +++F  M+  G+ PN +T+I +L+A S   ++  G K   +   +
Sbjct: 553 MMGVMASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELG-KQVHAAVMK 611

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           HG+++       ++    +SG +        +M    D + W + +     +G+ +
Sbjct: 612 HGVMEDNVVDNALISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQ 667



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/549 (23%), Positives = 261/549 (47%), Gaps = 15/549 (2%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSL 83
           +R  L   +   F++    +    N LI  L      +    + + T+     + DTY +
Sbjct: 321 ARHGLTDEAKDIFLSLKQKNAVTLNGLIVGLVRQDFSEEAVKIFVGTRNTVDVNADTYVV 380

Query: 84  LLKS----CIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFKS 138
           LL +     I      +G++VH  + R+ L    + + N L+++Y+KCG +  A+KIF+ 
Sbjct: 381 LLSALAEYSISEEGLRIGRVVHGHMLRTGLTDLKIAVSNGLVNMYAKCGAIESASKIFQL 440

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           M    D +SW+++IS+    G   +A+  +  M +    P+ +   + + +C+  + +  
Sbjct: 441 M-EATDRISWNTIISALDQNGNCEEAVMHYSLMRQSCISPSNFALISSLSSCAGLKLLTA 499

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  ++   +K G  D D  V   L+ M+ +    +   +KVF+ M E + V W  M+   
Sbjct: 500 GQQVHCDAVKWG-LDLDTSVSNVLVKMYGECGA-MSDYWKVFNSMAEHDEVSWNTMMGVM 557

Query: 259 TQLGCP-RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
                P  + +++F +M+  G +P++ T   +++A S L +   GKQ+H+  ++ G+  D
Sbjct: 558 ASSQTPISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMED 617

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLF 376
             V  +L+  YAK    G +     +F  M D  + +SW ++I+GY+ +G   +EA+   
Sbjct: 618 NVVDNALISCYAK---SGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNL-QEAMDCV 673

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             MI      +  TF+ +L AC ++       +++   ++     D  V ++L+ MY++ 
Sbjct: 674 WLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESDVVVESALVDMYSKC 733

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           GR++ A K F S+ ++N  S+N+M+  YA++    KA E+  E+  +       TF S+L
Sbjct: 734 GRVDYASKLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVL 793

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNV 555
           S  S  G + +G +    +   G       Y+ +I +  R   ++   +  + M  + N 
Sbjct: 794 SACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKIDKIKEYIQRMPIEPNA 853

Query: 556 ISWTSMITG 564
           + W +++  
Sbjct: 854 LIWRTVLVA 862



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 177/371 (47%), Gaps = 18/371 (4%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           + + +   + M + G  P+  T+  LL +        LGK VH+ + +  +  ++V+ N+
Sbjct: 564 ISEIVKVFNNMMRGGLIPNKVTFINLLAALSPLSVLELGKQVHAAVMKHGVMEDNVVDNA 623

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           LIS Y+K GD+     +F +M ++RD +SW+SMIS Y+  G   +A+     M+  G   
Sbjct: 624 LISCYAKSGDMGSCEHLFTNMSDRRDAISWNSMISGYIYNGNLQEAMDCVWLMIHSGQIM 683

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           +   FS ++ AC++   +  G  ++ F ++  + +SDV V  AL+DM+ K G VD  S  
Sbjct: 684 DCCTFSIILNACASVAALERGMELHAFGIR-SHLESDVVVESALVDMYSKCGRVDYAS-- 740

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           K+F+ MT++N   W  MI+   + G  R AI +F +M+ S   PD  T   V+SACS   
Sbjct: 741 KLFNSMTQRNEFSWNSMISGYARHGLGRKAIEIFEEMLRSRESPDHVTFVSVLSACSHAG 800

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWT 356
           L   G +        G+   +     ++D+  +    G +D  ++   RM ++ N + W 
Sbjct: 801 LVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRA---GKIDKIKEYIQRMPIEPNALIWR 857

Query: 357 AIITGYVQSG-------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            ++    QS        GR+   V L    I+ Q   N+   ++   A G   D+  A  
Sbjct: 858 TVLVACRQSKDGSNIDLGREASRVLL---EIEPQNPVNYVLASNFHAATGMWEDTAKART 914

Query: 410 VYTHAVKRGRA 420
               A ++  A
Sbjct: 915 AMRQATEKKEA 925



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/229 (29%), Positives = 112/229 (48%), Gaps = 10/229 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G +Q+A+  + LM   G   D  T+S++L +C        G  +H+   RS LE +
Sbjct: 660 YIYNGNLQEAMDCVWLMIHSGQIMDCCTFSIILNACASVAALERGMELHAFGIRSHLESD 719

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V+ ++L+ +YSKCG ++ A+K+F SM  +R+  SW+SMIS Y   G    AI +F EML
Sbjct: 720 VVVESALVDMYSKCGRVDYASKLFNSM-TQRNEFSWNSMISGYARHGLGRKAIEIFEEML 778

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
                P+   F +V+ ACS+   V  G   +  +   G         C +  +   G +D
Sbjct: 779 RSRESPDHVTFVSVLSACSHAGLVERGLEYFEMMPDHGILPQIEHYSCVIDLLGRAGKID 838

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRCTQ------LGCPRDAIRLFLDM 274
               Y    +M  E N + W  ++  C Q      +   R+A R+ L++
Sbjct: 839 KIKEY--IQRMPIEPNALIWRTVLVACRQSKDGSNIDLGREASRVLLEI 885



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/187 (30%), Positives = 98/187 (52%), Gaps = 9/187 (4%)

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
           D+N  E ++   +KRG   D  + N L++ YA+  R+  A + F+ + E+N VS+  +V 
Sbjct: 76  DANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPERNAVSWTCLVS 135

Query: 463 AYAKNLNSEKAFE----LLHEIEDTGVGTSAYTFASLLSGASSIGA--IGKGEQIHARII 516
            Y  +  +E+AF     +L E++  G   +++TF +LL      G   +G   Q+H  + 
Sbjct: 136 GYVLHGIAEEAFRVFRAMLREVQ-AGCRPTSFTFGTLLRACQDGGPDRLGFAVQVHGLVS 194

Query: 517 KSGFESNHCIYNALISMYSRCANVEA--AFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           K+ + SN  + NALISMY  C       A +VF     R++I+W ++++ +AK G  A  
Sbjct: 195 KTEYASNTTVCNALISMYGSCTVGPPILAQRVFDGTPIRDLITWNALMSVYAKKGDVAST 254

Query: 575 LEIFYKM 581
             +F  M
Sbjct: 255 FTLFKDM 261



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 69/139 (49%), Gaps = 8/139 (5%)

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           A LL      G     E +H  +IK G   +  + N L++ Y++ A + AA QVF EM +
Sbjct: 65  ADLLPLLRRGGDANSPENLHVELIKRGLNHDLFLCNHLVNSYAKGARLAAASQVFDEMPE 124

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLAD---GIKPNGITYIAVLSACSHAGLISEG 609
           RN +SWT +++G+  HG A  A  +F  ML +   G +P   T+  +L AC   G    G
Sbjct: 125 RNAVSWTCLVSGYVLHGIAEEAFRVFRAMLREVQAGCRPTSFTFGTLLRACQDGGPDRLG 184

Query: 610 WKHFRSMYDEHGIVQRMEH 628
           +         HG+V + E+
Sbjct: 185 FA-----VQVHGLVSKTEY 198


>gi|357477865|ref|XP_003609218.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510273|gb|AES91415.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1134

 Score =  524 bits (1350), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 283/773 (36%), Positives = 472/773 (61%), Gaps = 17/773 (2%)

Query: 99   LVHSLLTR---SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            L+  +LTR   S    +  + ++L++ +++ G ++ A  IFK M + R+ V+ + ++   
Sbjct: 369  LLEQMLTRIEKSGFLRDLYVGSALVNGFARYGLMDCAKMIFKQMYD-RNAVTMNGLMVGL 427

Query: 156  VNRGKQVDAIHMFVEMLELGFCPNE---YCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
              + +  +A  +F EM +L    +E      S      +  E    G  ++ +L + G  
Sbjct: 428  ARQHQGEEAAKVFKEMKDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFRSGLV 487

Query: 213  DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
            D+ + +G AL++M+ K +  +++A  VF  M  K+TV W  MI+         +A+  F 
Sbjct: 488  DARISIGNALVNMYGKCTA-IDNACSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFH 546

Query: 273  DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
             M  +G +P  F++   +S+CS L   T G+Q+H    + GL LDV V  +L+ +YA+  
Sbjct: 547  TMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETD 606

Query: 333  VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
               S+++ +KVF +M +++ +SW + I    +      +A+K F +M+Q    PN  TF 
Sbjct: 607  ---SINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFI 663

Query: 393  SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
            ++L A  +     +  Q++   +K   A D+ + N+L++ Y +  +MED    F  + E+
Sbjct: 664  NILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSER 723

Query: 453  -NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
             + VS+N+M+  Y  +    KA +L+  +   G     +TFA++LS  +S+  + +G ++
Sbjct: 724  RDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEV 783

Query: 512  HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
            HA  +++  ES+  + +AL+ MY++C  ++ A + F+ M  RN+ SW SMI+G+A+HG  
Sbjct: 784  HACAVRACLESDVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHG 843

Query: 572  ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             +AL+IF +M   G  P+ +T++ VLSACSH GL+ EG+KHF+SM + +G+  R+EH++C
Sbjct: 844  QKALKIFTRMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSC 903

Query: 632  MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA-CRVHG-DTELGKHAAEMILEQDP 689
            MVDLLGR+G + +  +FI++MP+  ++L+WRT LGA CR +G +TELG+ AA+M++E +P
Sbjct: 904  MVDLLGRAGDVKKIEDFIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEP 963

Query: 690  QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
            Q+   ++LLSN++A+ G+WE V   R  M++  + K+AGCSW+   + VH F  G+ +HP
Sbjct: 964  QNAVNYVLLSNMHAAGGNWEDVVEARLAMRKAAVKKDAGCSWVNMKDGVHLFVAGDQTHP 1023

Query: 750  KTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS 809
            +  +IY +L +L  KI++ GY+P+T + L++LE E K + L  HSEK+A+AF L  T KS
Sbjct: 1024 EKEKIYEKLKELMNKIRDAGYVPETKYALYDLELENKEELLSYHSEKLAIAFVL--TRKS 1081

Query: 810  K-PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            + PIR+ KNLRVCGDCHTA KYIS + GR+I+LRDSNRFHH   G CSC DYW
Sbjct: 1082 ELPIRIMKNLRVCGDCHTAFKYISKIVGRQIILRDSNRFHHFGGGMCSCGDYW 1134



 Score =  236 bits (601), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 177/645 (27%), Positives = 328/645 (50%), Gaps = 40/645 (6%)

Query: 85  LKSCIR--SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC-GDLNEANKIFKSMGN 141
           L++C +  S    LG  +H+ + +     + ++ N L+S+YS C G +++A+++F  +  
Sbjct: 248 LRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEI-K 306

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMF----VEMLELGFCPNEYCF-SAVIRACSNTE-N 195
            R+ V+W+S+IS Y  RG  V A  +F    +E +EL   PNEY   S V  ACS  +  
Sbjct: 307 FRNSVTWNSIISVYCRRGDAVSAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCG 366

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +   +   + K G+   D+ VG AL++ F +  + ++ A  +F +M ++N V    ++
Sbjct: 367 LVLLEQMLTRIEKSGFL-RDLYVGSALVNGFARYGL-MDCAKMIFKQMYDRNAVTMNGLM 424

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK----QLHSWAIR 311
               +     +A ++F +M       +  +L  ++S  +E      GK    ++H++  R
Sbjct: 425 VGLARQHQGEEAAKVFKEM-KDLVEINSESLVVLLSTFTEFSNLKEGKRKGQEVHAYLFR 483

Query: 312 TGLA-LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           +GL    + +G +LV+MY KCT   ++D++  VF  M   + +SW ++I+G +    R +
Sbjct: 484 SGLVDARISIGNALVNMYGKCT---AIDNACSVFQLMPSKDTVSWNSMISG-LDHNERFE 539

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EAV  F  M +  + P++F+  S L +C +L    +  Q++    K G  LD  V N+L+
Sbjct: 540 EAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLGRQIHGEGFKWGLDLDVSVSNALL 599

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE-KAFELLHEIEDTGVGTSA 489
           ++YA +  + + +K F  + E + VS+N+ + A AK   S  +A +   E+   G   + 
Sbjct: 600 TLYAETDSINECQKVFFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNR 659

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            TF ++L+  SS   +G G QIHA I+K     ++ I NAL++ Y +C  +E    +F  
Sbjct: 660 VTFINILAAVSSFSVLGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSR 719

Query: 550 M-EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           M E R+ +SW SMI+G+   G   +A+++ + M+  G K +G T+  VLSAC+    +  
Sbjct: 720 MSERRDEVSWNSMISGYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLER 779

Query: 609 GWK----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           G +      R+  +   +V      + +VD+  + G +  A  F   MP+  ++  W + 
Sbjct: 780 GMEVHACAVRACLESDVVVG-----SALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSM 833

Query: 665 LGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYASAGH 707
           +     HG    G+ A ++   ++Q  Q P  H+    + ++  H
Sbjct: 834 ISGYARHGH---GQKALKIFTRMKQHGQSP-DHVTFVGVLSACSH 874



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 144/478 (30%), Positives = 255/478 (53%), Gaps = 27/478 (5%)

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
           L K G+ D DV     LI+++V+   +L SA K+FD+M +KN V W+ +I+  TQ   P 
Sbjct: 166 LYKTGFTD-DVFFCNTLINIYVRIG-NLVSARKLFDEMPQKNLVSWSCLISGYTQNRMPD 223

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLALDVCVGCS 323
           +A  LF  +I SG LP+ F +   + AC +        G Q+H++  +     D+ +   
Sbjct: 224 EACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCVSDMILSNV 283

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM---- 379
           L+ MY+ C+  GS+DD+ +VFD +   N ++W +II+ Y + G     A KLFS M    
Sbjct: 284 LMSMYSDCS--GSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDA-VSAFKLFSVMQMEG 340

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVA--EQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           ++  + PN +T  S++ A  +L D  +   EQ+ T   K G   D  VG++L++ +AR G
Sbjct: 341 VELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARYG 400

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            M+ A+  F+ ++++N V+ N ++   A+    E+A ++  E++D  V  ++ +   LLS
Sbjct: 401 LMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEMKDL-VEINSESLVVLLS 459

Query: 498 GASSIGAIG----KGEQIHARIIKSGF-ESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
             +    +     KG+++HA + +SG  ++   I NAL++MY +C  ++ A  VF+ M  
Sbjct: 460 TFTEFSNLKEGKRKGQEVHAYLFRSGLVDARISIGNALVNMYGKCTAIDNACSVFQLMPS 519

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           ++ +SW SMI+G   +     A+  F+ M  +G+ P+  + I+ LS+CS  G ++ G   
Sbjct: 520 KDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWLTLG--- 576

Query: 613 FRSMYDE---HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
            R ++ E    G+   +     ++ L   + S+ E  +    MP   D + W +F+GA
Sbjct: 577 -RQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMP-EYDQVSWNSFIGA 632



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 186/730 (25%), Positives = 335/730 (45%), Gaps = 86/730 (11%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  L ++    +    N+LI++Y + G+L  A K+F  M  K ++VSWS +IS Y    
Sbjct: 162 LHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQK-NLVSWSCLISGYTQNR 220

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN--TENVAIGHIIYGFLLKCGYFDSDVC 217
              +A  +F  ++  G  PN +   + +RAC    +  + +G  I+ F+ K     SD+ 
Sbjct: 221 MPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHAFICKLPCV-SDMI 279

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           +   L+ M+   S  ++ A++VFD++  +N+V W  +I+   + G    A +LF  M + 
Sbjct: 280 LSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAVSAFKLFSVMQME 339

Query: 278 G----FLPDRFTL-SGVVSACSELEL-FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           G      P+ +TL S V +ACS  +      +Q+ +   ++G   D+ VG +LV+ +A+ 
Sbjct: 340 GVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLYVGSALVNGFARY 399

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +D ++ +F +M D N ++   ++ G  +   + +EA K+F +M +  V  N  + 
Sbjct: 400 ---GLMDCAKMIFKQMYDRNAVTMNGLMVGLARQ-HQGEEAAKVFKEM-KDLVEINSESL 454

Query: 392 ASVLKACGNLLDSNVAE------QVYTHAVKRGRALDDC---VGNSLISMYARSGRMEDA 442
             +L        SN+ E      +V+ +  + G  L D    +GN+L++MY +   +++A
Sbjct: 455 VVLLSTFTEF--SNLKEGKRKGQEVHAYLFRSG--LVDARISIGNALVNMYGKCTAIDNA 510

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              F+ +  K+ VS+N+M+     N   E+A    H ++  G+  S ++  S LS  SS+
Sbjct: 511 CSVFQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSL 570

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           G +  G QIH    K G + +  + NAL+++Y+   ++    +VF +M + + +SW S I
Sbjct: 571 GWLTLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQMPEYDQVSWNSFI 630

Query: 563 TGFAKHGFAA-RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG------------ 609
              AK+  +  +AL+ F +M+  G +PN +T+I +L+A S   ++  G            
Sbjct: 631 GALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSV 690

Query: 610 -------------WKHFRSMYDEHGIVQRMEH------YACMVDLLGRSGSLTEALEFIR 650
                        +     M D   I  RM        +  M+     SG L +A++ + 
Sbjct: 691 ADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVW 750

Query: 651 SMPLSA---DVLVWRTFLGACRVHGDTELGKH----AAEMILEQDPQDPAAHILLSNLYA 703
            M       D   + T L AC      E G      A    LE D    +A   L ++YA
Sbjct: 751 PMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSA---LVDMYA 807

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
             G  +Y +   + M  RN+      SW    N +   +       K L+I+        
Sbjct: 808 KCGKIDYASRFFELMPVRNIY-----SW----NSMISGYARHGHGQKALKIFT------- 851

Query: 764 KIKEFGYLPD 773
           ++K+ G  PD
Sbjct: 852 RMKQHGQSPD 861



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 233/463 (50%), Gaps = 31/463 (6%)

Query: 36  FIAQPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P+      N +I  L+ + R ++A+     M + G  P   +    L SC      
Sbjct: 514 FQLMPSKDTVSWNSMISGLDHNERFEEAVSCFHTMKRNGMVPSNFSVISTLSSCSSLGWL 573

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            LG+ +H    +  L+ +  + N+L++LY++   +NE  K+F  M  + D VSW+S I +
Sbjct: 574 TLGRQIHGEGFKWGLDLDVSVSNALLTLYAETDSINECQKVFFQM-PEYDQVSWNSFIGA 632

Query: 155 YVNRGKQV-DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
                  V  A+  F+EM++ G+ PN   F  ++ A S+   + +GH I+  +LK    D
Sbjct: 633 LAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSVLGLGHQIHALILKYSVAD 692

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFL 272
            D  +  AL+  + K    +E    +F +M+E ++ V W  MI+     G    A+ L  
Sbjct: 693 -DNAIENALLAFYGKCE-QMEDCEIIFSRMSERRDEVSWNSMISGYLHSGILHKAMDLVW 750

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M+  G   D FT + V+SAC+ +     G ++H+ A+R  L  DV VG +LVDMYAKC 
Sbjct: 751 PMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVRACLESDVVVGSALVDMYAKC- 809

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G +D + + F+ M   N+ SW ++I+GY +  G  ++A+K+F+ M Q   +P+H TF 
Sbjct: 810 --GKIDYASRFFELMPVRNIYSWNSMISGYARH-GHGQKALKIFTRMKQHGQSPDHVTFV 866

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS--------LISMYARSGRMEDARK 444
            VL AC ++    + ++ Y H     +++ +  G S        ++ +  R+G ++    
Sbjct: 867 GVLSACSHV---GLVDEGYKHF----KSMGEVYGLSPRIEHFSCMVDLLGRAGDVKKIED 919

Query: 445 AFESL-FEKNLVSYNTMVDA--YAKNLNSE---KAFELLHEIE 481
             +++  + N++ + T++ A   A   N+E   +A ++L E+E
Sbjct: 920 FIKTMPMDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELE 962



 Score =  135 bits (340), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 179/375 (47%), Gaps = 12/375 (3%)

Query: 36  FIAQPTTSEPLSNRLIYHLN--DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F   P   +   N  I  L   +  V +A+     M Q G  P+  T+  +L +      
Sbjct: 615 FFQMPEYDQVSWNSFIGALAKYEASVLQALKYFLEMMQAGWRPNRVTFINILAAVSSFSV 674

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
             LG  +H+L+ +  +  ++ I N+L++ Y KC  + +   IF  M  +RD VSW+SMIS
Sbjct: 675 LGLGHQIHALILKYSVADDNAIENALLAFYGKCEQMEDCEIIFSRMSERRDEVSWNSMIS 734

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            Y++ G    A+ +   M++ G   + + F+ V+ AC++   +  G  ++   ++    +
Sbjct: 735 GYLHSGILHKAMDLVWPMMQRGQKLDGFTFATVLSACASVATLERGMEVHACAVR-ACLE 793

Query: 214 SDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           SDV VG AL+DM+ K G +D  S +  F+ M  +N   W  MI+   + G  + A+++F 
Sbjct: 794 SDVVVGSALVDMYAKCGKIDYASRF--FELMPVRNIYSWNSMISGYARHGHGQKALKIFT 851

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            M   G  PD  T  GV+SACS + L   G K   S     GL+  +     +VD+  + 
Sbjct: 852 RMKQHGQSPDHVTFVGVLSACSHVGLVDEGYKHFKSMGEVYGLSPRIEHFSCMVDLLGRA 911

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM---IQGQVAPNH 388
                ++D  K     +D N++ W  ++    ++ GR+ E  +  + M   ++ Q A N+
Sbjct: 912 GDVKKIEDFIKTMP--MDPNILIWRTVLGACCRANGRNTELGQRAAKMLIELEPQNAVNY 969

Query: 389 FTFASVLKACGNLLD 403
              +++  A GN  D
Sbjct: 970 VLLSNMHAAGGNWED 984



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 144/296 (48%), Gaps = 11/296 (3%)

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           K   +L D+N    ++    K G   D    N+LI++Y R G +  ARK F+ + +KNLV
Sbjct: 151 KTSSSLYDAN---HLHLQLYKTGFTDDVFFCNTLINIYVRIGNLVSARKLFDEMPQKNLV 207

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG--KGEQIHA 513
           S++ ++  Y +N   ++A  L   +  +G+  + +   S L      G+ G   G QIHA
Sbjct: 208 SWSCLISGYTQNRMPDEACSLFKGVISSGLLPNHFAVGSALRACQQCGSTGIKLGMQIHA 267

Query: 514 RIIKSGFESNHCIYNALISMYSRCA-NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
            I K    S+  + N L+SMYS C+ +++ A +VF E++ RN ++W S+I+ + + G A 
Sbjct: 268 FICKLPCVSDMILSNVLMSMYSDCSGSIDDAHRVFDEIKFRNSVTWNSIISVYCRRGDAV 327

Query: 573 RALEIFYKMLADGI----KPNGITYIA-VLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
            A ++F  M  +G+    +PN  T  + V +ACS A       +   +  ++ G ++ + 
Sbjct: 328 SAFKLFSVMQMEGVELNLRPNEYTLCSLVTAACSLADCGLVLLEQMLTRIEKSGFLRDLY 387

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             + +V+   R G +  A    + M     V +    +G  R H   E  K   EM
Sbjct: 388 VGSALVNGFARYGLMDCAKMIFKQMYDRNAVTMNGLMVGLARQHQGEEAAKVFKEM 443


>gi|357475445|ref|XP_003608008.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355509063|gb|AES90205.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1183

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 278/796 (34%), Positives = 462/796 (58%), Gaps = 11/796 (1%)

Query: 66   LDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            ++L+T+  ++   L++Y  +L+ C   ++   GK VHS++  + +  +  +   L+ +Y 
Sbjct: 356  IELLTKSKSYELGLNSYCSVLQLCAEKKSLEDGKRVHSVIISNGISIDEALGAKLVFMYV 415

Query: 125  KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
             CGDL +  KIF  + N + +  W+ ++S Y   G   +++ +F +M +LG   N Y F+
Sbjct: 416  NCGDLVQGRKIFDKIMNDK-VFLWNLLMSEYAKIGNFRESVSLFKKMQKLGVVGNCYTFT 474

Query: 185  AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKM 243
             V++  +    V     ++G++LK G F S+  V  +LI  + K G V  ESA+ +FD++
Sbjct: 475  CVLKCFAALGKVKECKRVHGYVLKLG-FGSNTAVVNSLIAAYFKFGGV--ESAHNLFDEL 531

Query: 244  TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            +E + V W  MI  C   G   + + +F+ M++ G   D  TL  V+ A + +   + G+
Sbjct: 532  SEPDVVSWNSMINGCVVNGFSGNGLEIFIQMLILGVEVDLTTLVSVLVAWANIGNLSLGR 591

Query: 304  QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
             LH + ++   + +V    +L+DMY+KC   G+++ + +VF +M D  ++SWT+ I  YV
Sbjct: 592  ALHGFGVKACFSEEVVFSNTLLDMYSKC---GNLNGATEVFVKMGDTTIVSWTSTIAAYV 648

Query: 364  QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            + G    +A+ LF +M    V P+ +T  S++ AC      +    V+++ +K G   + 
Sbjct: 649  REGLYS-DAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDVHSYVIKNGMGSNL 707

Query: 424  CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
             V N+LI+MYA+ G +E+AR  F  +  K++VS+NTM+  Y++N    +A EL  +++  
Sbjct: 708  PVTNALINMYAKCGSVEEARLVFSKIPVKDIVSWNTMIGGYSQNSLPNEALELFLDMQKQ 767

Query: 484  GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
                   T A +L   + + A+ KG +IH  I++ G+ S+  +  AL+ MY++C  +  A
Sbjct: 768  -FKPDDITMACVLPACAGLAALDKGREIHGHILRRGYFSDLHVACALVDMYAKCGLLVLA 826

Query: 544  FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
              +F  +  +++ISWT MI G+  HGF   A+  F +M   GI+P+  ++  +L+ACSH+
Sbjct: 827  QLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIEPDESSFSVILNACSHS 886

Query: 604  GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
            GL++EGWK F SM +E G+  ++EHYAC+VDLL R G+L++A +FI SMP+  D  +W  
Sbjct: 887  GLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARMGNLSKAYKFIESMPIKPDTTIWGV 946

Query: 664  FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
             L  CR+H D +L +  AE I E +P +   +++L+N+YA A  WE V  +RKRM++R  
Sbjct: 947  LLSGCRIHHDVKLAEKVAEHIFELEPDNTRYYVVLANVYAEAEKWEEVKKLRKRMQKRGF 1006

Query: 724  IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
             +  GCSWIE   K + F  G + HP+   I   L +L ++++   Y     +VL   ++
Sbjct: 1007 KQNPGCSWIEVGGKFNIFVAGNSKHPQAKRIDVLLRKLTMQMQNEDYFSMFRYVLINEDD 1066

Query: 784  EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
             +K      HSEK A+AFG+++    + +RV KN RVCGDCH   K++S  T REIVLRD
Sbjct: 1067 MEKEMIQCGHSEKSAMAFGILNLPPGRTVRVSKNQRVCGDCHEMGKFMSKTTKREIVLRD 1126

Query: 844  SNRFHHIKDGKCSCND 859
            SNRFHH KDG CSC D
Sbjct: 1127 SNRFHHFKDGLCSCRD 1142



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/323 (29%), Positives = 171/323 (52%), Gaps = 9/323 (2%)

Query: 41  TTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
           TT    ++ +  ++ +G    AI   D M  KG  PD+ T + ++ +C  S +   G+ V
Sbjct: 635 TTIVSWTSTIAAYVREGLYSDAIGLFDEMQSKGVRPDIYTVTSIVHACACSSSLDKGRDV 694

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           HS + ++ +  N  + N+LI++Y+KCG + EA  +F  +  K DIVSW++MI  Y     
Sbjct: 695 HSYVIKNGMGSNLPVTNALINMYAKCGSVEEARLVFSKIPVK-DIVSWNTMIGGYSQNSL 753

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
             +A+ +F++M +  F P++   + V+ AC+    +  G  I+G +L+ GYF SD+ V C
Sbjct: 754 PNEALELFLDM-QKQFKPDDITMACVLPACAGLAALDKGREIHGHILRRGYF-SDLHVAC 811

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           AL+DM+ K  + L  A  +FD + +K+ + WT+MI      G   +AI  F +M ++G  
Sbjct: 812 ALVDMYAKCGL-LVLAQLLFDMIPKKDLISWTVMIAGYGMHGFGNEAISTFNEMRIAGIE 870

Query: 281 PDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           PD  + S +++ACS   L   G K  +S     G+   +     +VD+ A+    G++  
Sbjct: 871 PDESSFSVILNACSHSGLLNEGWKFFNSMRNECGVEPKLEHYACVVDLLARM---GNLSK 927

Query: 340 SRKVFDRM-LDHNVMSWTAIITG 361
           + K  + M +  +   W  +++G
Sbjct: 928 AYKFIESMPIKPDTTIWGVLLSG 950


>gi|326532272|dbj|BAK05065.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 889

 Score =  524 bits (1349), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 285/822 (34%), Positives = 453/822 (55%), Gaps = 80/822 (9%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           LL     EPN +  N +++ Y+K G L++A ++F  M  +RD+ SW++++S Y   G+ +
Sbjct: 85  LLRGDITEPNVITHNIMMNGYAKLGSLSDAEELFGRM-PRRDVTSWNTLMSGYYQSGRFL 143

Query: 163 DAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
           DA+  FV M   G   PN + F   +++C       +   + G L K G F  D  V   
Sbjct: 144 DAMESFVSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFG-FQGDPDVATG 202

Query: 222 LIDMFVK-GSVDLES-----------------------------AYKVFDKMTEKNTVGW 251
           ++DMFV+ G+VD  S                             A ++F+ M E++ V W
Sbjct: 203 IVDMFVRCGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSW 262

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            +M++  +Q G  R+A+ + +DM   G   D  T +  ++AC++L     GKQLH+  IR
Sbjct: 263 NMMVSALSQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIR 322

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           +   +D  V  ++V++YAKC   G   ++R+VF  + D N +SWT +I G++Q G    E
Sbjct: 323 SLPCIDPYVASAMVELYAKC---GCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCF-SE 378

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           +++LF+ M    +  + F  A+++  C N +D  +A Q+++ ++K G      + NSLIS
Sbjct: 379 SLELFNQMRAELMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRAVVISNSLIS 438

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL-------------- 477
           MYA+ G +++A   F S+ E+++VS+  M+ AY++  N  KA E                
Sbjct: 439 MYAKCGNLQNAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAM 498

Query: 478 ------HEIEDTGVGTSA------------YTFASLLSGASSIGAIGKGEQIHARIIKSG 519
                 H  E+ G+   +             T+ +L  G + +GA   G+QI    +K G
Sbjct: 499 LGAYIQHGAEEDGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVG 558

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
              +  + NA+I+MYS+C  +  A ++F  +  ++++SW +MITG+++HG   +A+EIF 
Sbjct: 559 LILDTSVMNAVITMYSKCGRISEARKIFDFLSRKDLVSWNAMITGYSQHGMGKQAIEIFD 618

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            ML  G KP+ I+Y+AVLS+CSH+GL+ EG  +F  +  +H +   +EH++CMVDLL R+
Sbjct: 619 DMLKKGAKPDYISYVAVLSSCSHSGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARA 678

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G+L EA   I  MP+     VW   L AC+ HG+ EL + AA+ + + D  D   ++LL+
Sbjct: 679 GNLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNELAELAAKHLFDLDSPDSGGYMLLA 738

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
            +YA AG     A +RK M+++ + K  G SW+E  NKVH F   + SHP+ + I  +LD
Sbjct: 739 KIYADAGKSVDSAQVRKLMRDKGIKKNPGYSWMEVKNKVHVFKAEDVSHPQVIAIREKLD 798

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L  KI + GY+             + ++    HSEK+AVAFG+++     PI + KNLR
Sbjct: 799 ELMEKIAQLGYV-----------RTESLRSEIHHSEKLAVAFGIMNLPAWMPIHIMKNLR 847

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCHT IK IS VTGRE V+RD+ RFHH K G CSC DYW
Sbjct: 848 ICGDCHTVIKLISTVTGREFVIRDAVRFHHFKGGSCSCGDYW 889



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/429 (24%), Positives = 214/429 (49%), Gaps = 46/429 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR ++A+     M  +G   D  TY+  L +C +  +   GK +H+ + RS    +  + 
Sbjct: 273 GRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDPYVA 332

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++++ LY+KCG   EA ++F S+   R+ VSW+ +I  ++  G   +++ +F +M     
Sbjct: 333 SAMVELYAKCGCFKEARRVFSSL-RDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAELM 391

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +++  + +I  CSN  ++ +   ++   LK G+  + V +  +LI M+ K   +L++A
Sbjct: 392 TVDQFALATIISGCSNRMDMCLARQLHSLSLKSGHTRA-VVISNSLISMYAKCG-NLQNA 449

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQL-------------------------------GCPR 265
             +F  M E++ V WT M+T  +Q+                               G   
Sbjct: 450 ESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMSTRNVITWNAMLGAYIQHGAEE 509

Query: 266 DAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           D ++++  M+     +PD  T   +   C+++     G Q+    ++ GL LD  V  ++
Sbjct: 510 DGLKMYSAMLTEKDVIPDWVTYVTLFRGCADMGANKLGDQITGHTVKVGLILDTSVMNAV 569

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           + MY+KC   G + ++RK+FD +   +++SW A+ITGY Q  G  K+A+++F DM++   
Sbjct: 570 ITMYSKC---GRISEARKIFDFLSRKDLVSWNAMITGYSQH-GMGKQAIEIFDDMLKKGA 625

Query: 385 APNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRALDDCVG--NSLISMYARSGRME 440
            P++ ++ +VL +C +   S + ++   Y   +KR   +   +   + ++ + AR+G + 
Sbjct: 626 KPDYISYVAVLSSCSH---SGLVQEGKFYFDMLKRDHNVSPGLEHFSCMVDLLARAGNLI 682

Query: 441 DARKAFESL 449
           +A+   + +
Sbjct: 683 EAKNLIDEM 691



 Score =  150 bits (380), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 221/497 (44%), Gaps = 98/497 (19%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV------------ 333
           L+  + +C         + LH   +  GLA  V +  +L+  Y  C              
Sbjct: 31  LADALRSCGARGALAGARALHGRLVSVGLASAVFLQNTLLHAYLSCGALPDARGLLRGDI 90

Query: 334 -----------------DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
                             GS+ D+ ++F RM   +V SW  +++GY QS GR  +A++ F
Sbjct: 91  TEPNVITHNIMMNGYAKLGSLSDAEELFGRMPRRDVTSWNTLMSGYYQS-GRFLDAMESF 149

Query: 377 SDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
             M + G   PN FTF   +K+CG L    VA Q+     K G   D  V   ++ M+ R
Sbjct: 150 VSMRRSGDSLPNAFTFGCAMKSCGALGWHEVALQLLGLLTKFGFQGDPDVATGIVDMFVR 209

Query: 436 SGRMEDARKA-------------------------------FESLFEKNLVSYNTMVDAY 464
            G ++ A K                                FES+ E+++VS+N MV A 
Sbjct: 210 CGAVDFASKQFSQIERPTVFCRNSMLAGYAKSYGVDHALELFESMPERDVVSWNMMVSAL 269

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           +++  + +A  +  ++ + GV   + T+ S L+  + + ++G G+Q+HA++I+S    + 
Sbjct: 270 SQSGRAREALSVAVDMHNRGVRLDSTTYTSSLTACAKLSSLGWGKQLHAQVIRSLPCIDP 329

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + +A++ +Y++C   + A +VF  + DRN +SWT +I GF ++G  + +LE+F +M A+
Sbjct: 330 YVASAMVELYAKCGCFKEARRVFSSLRDRNTVSWTVLIGGFLQYGCFSESLELFNQMRAE 389

Query: 585 GIKPNGITYIAVLSACS-----------HAGLISEGWKHFR---------SMYDEHGIVQ 624
            +  +      ++S CS           H+  +  G  H R         SMY + G +Q
Sbjct: 390 LMTVDQFALATIISGCSNRMDMCLARQLHSLSLKSG--HTRAVVISNSLISMYAKCGNLQ 447

Query: 625 RME------------HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
             E             +  M+    + G++ +A EF   M  + +V+ W   LGA   HG
Sbjct: 448 NAESIFSSMEERDIVSWTGMLTAYSQVGNIGKAREFFDGMS-TRNVITWNAMLGAYIQHG 506

Query: 673 DTELG-KHAAEMILEQD 688
             E G K  + M+ E+D
Sbjct: 507 AEEDGLKMYSAMLTEKD 523


>gi|15237421|ref|NP_197188.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174141|sp|Q9LFL5.1|PP390_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g16860
 gi|9755687|emb|CAC01699.1| putative protein [Arabidopsis thaliana]
 gi|332004967|gb|AED92350.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 850

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 300/816 (36%), Positives = 454/816 (55%), Gaps = 62/816 (7%)

Query: 98  KLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSY 155
           KL+H  LL+   L  N  + + LIS Y   G L+ A  + +    +   +  W+S+I SY
Sbjct: 45  KLIHQKLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY 102

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
            + G     +++F  M  L + P+ Y F  V +AC    +V  G   +   L  G F S+
Sbjct: 103 GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG-FISN 161

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           V VG AL+ M+ +    L  A KVFD+M+  + V W  +I    +LG P+ A+ +F  M 
Sbjct: 162 VFVGNALVAMYSRCR-SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220

Query: 276 LS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
              G  PD  TL  V+  C+ L   + GKQLH +A+ + +  ++ VG  LVDMYAKC   
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC--- 277

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS----------------- 377
           G +D++  VF  M   +V+SW A++ GY Q G R ++AV+LF                  
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG-RFEDAVRLFEKMQEEKIKMDVVTWSAA 336

Query: 378 ------------------DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK--- 416
                              M+   + PN  T  SVL  C ++      ++++ +A+K   
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396

Query: 417 ----RGRALDDCVGNSLISMYARSGRMEDARKAFESLF--EKNLVSYNTMVDAYAKNLNS 470
                G   ++ V N LI MYA+  +++ AR  F+SL   E+++V++  M+  Y+++ ++
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456

Query: 471 EKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC--- 525
            KA ELL E+  ED     +A+T +  L   +S+ A+  G+QIHA  +++  + N     
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLF 514

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + N LI MY++C ++  A  VF  M  +N ++WTS++TG+  HG+   AL IF +M   G
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
            K +G+T + VL ACSH+G+I +G ++F  M    G+    EHYAC+VDLLGR+G L  A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
           L  I  MP+    +VW  FL  CR+HG  ELG++AAE I E       ++ LLSNLYA+A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W+ V  IR  M+ + + K  GCSW+E       F VG+ +HP   EIY  L     +I
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           K+ GY+P+T F LH++++E+K   LF+HSEK+A+A+G+++T +   IR+ KNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           TA  Y+S +   +I+LRDS+RFHH K+G CSC  YW
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 162/587 (27%), Positives = 276/587 (47%), Gaps = 73/587 (12%)

Query: 45  PLSNRLIYHLN--------DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           P S+  +YH N        +G   K ++   LM      PD  T+  + K+C    +   
Sbjct: 86  PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+  H+L   +    N  + N+L+++YS+C  L++A K+F  M +  D+VSW+S+I SY 
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYA 204

Query: 157 NRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
             GK   A+ MF  M  E G  P+      V+  C++    ++G  ++ F +       +
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-N 263

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF---- 271
           + VG  L+DM+ K  + ++ A  VF  M+ K+ V W  M+   +Q+G   DA+RLF    
Sbjct: 264 MFVGNCLVDMYAKCGM-MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322

Query: 272 -------------------------------LDMILSGFLPDRFTLSGVVSACSELELFT 300
                                            M+ SG  P+  TL  V+S C+ +    
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382

Query: 301 SGKQLHSWAIRTGLAL-------DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LDHN 351
            GK++H +AI+  + L       +  V   L+DMYAKC     VD +R +FD +   + +
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK---KVDTARAMFDSLSPKERD 439

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQ 409
           V++WT +I GY Q G  +K A++L S+M +   Q  PN FT +  L AC +L    + +Q
Sbjct: 440 VVTWTVMIGGYSQHGDANK-ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498

Query: 410 VYTHAVK-RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           ++ +A++ +  A+   V N LI MYA+ G + DAR  F+++  KN V++ +++  Y  + 
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESN 523
             E+A  +  E+   G      T   +L   S  G I +G +   R+     +  G E  
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH- 617

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
              Y  L+ +  R   + AA ++ +EM  +   + W + ++    HG
Sbjct: 618 ---YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661


>gi|224073070|ref|XP_002303960.1| predicted protein [Populus trichocarpa]
 gi|222841392|gb|EEE78939.1| predicted protein [Populus trichocarpa]
          Length = 704

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 275/712 (38%), Positives = 416/712 (58%), Gaps = 9/712 (1%)

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           M+  Y        A+  F  M      P  Y F+ +++ C +  ++  G  I+G ++  G
Sbjct: 1   MLKGYAKSSSLDSALSFFSRMKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSG 60

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
            F  ++     +++M+ K    +  AY +FD+M E++ V W  MI+   Q G  + A+ L
Sbjct: 61  -FSWNLFAMTGVVNMYAKCR-QINDAYNMFDRMPERDLVCWNTMISGYAQNGFAKVALML 118

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
            L M   G  PD  T+  ++ A ++  L   G  +H + +R G    V V  +LVDMY+K
Sbjct: 119 VLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESLVNVSTALVDMYSK 178

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE-AVKLFSDMIQGQVAPNHF 389
           C   GSV  +R +FD M    V+SW ++I GYVQSG  D E A+ +F  M+   V P + 
Sbjct: 179 C---GSVSIARVIFDGMDHRTVVSWNSMIDGYVQSG--DAEGAMLIFQKMLDEGVQPTNV 233

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           T    L AC +L D    + V+    +     D  V NSLISMY++  R++ A   F++L
Sbjct: 234 TVMGALHACADLGDLERGKFVHKLVDQLKLDSDVSVMNSLISMYSKCKRVDIAADIFKNL 293

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
             K LVS+N M+  YA+N    +A     E++   +   ++T  S++   + +    + +
Sbjct: 294 RNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAK 353

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
            IH  +I+   + N  +  AL+ MY++C  +  A ++F  M  R+VI+W +MI G+  HG
Sbjct: 354 WIHGLVIRRFLDKNVFVMTALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHG 413

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
               ++E+F +M    IKPN IT++  LSACSH+GL+ EG   F SM  ++GI   M+HY
Sbjct: 414 LGKTSVELFKEMKKGTIKPNDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHY 473

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
             MVDLLGR+G L +A +FI+ MP+   + V+   LGAC++H + +LG+ AA  I + +P
Sbjct: 474 GAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKIHKNVDLGEKAAFEIFKLNP 533

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
            D   H+LL+N+YA+A  W  VA +R  M++  L K  GCS +E  N+VH F+ G TSHP
Sbjct: 534 DDGGYHVLLANIYATASMWGKVAKVRTIMEKSGLQKTPGCSLVEIGNEVHSFYSGTTSHP 593

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS 809
           ++ +IY+ L+ L  +I+  GY+PDTN + H++E++ KVQ L  HSEK+A+AFGL++TS  
Sbjct: 594 QSKKIYSYLETLVDEIRAAGYVPDTNSI-HDVEDDVKVQLLNTHSEKLAIAFGLLNTSTG 652

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            PI + KNLRVCGDCH A KYIS+VTGREI++RD +RFH  KDG CSC DYW
Sbjct: 653 TPIHIRKNLRVCGDCHNATKYISLVTGREIIVRDMHRFHLFKDGVCSCGDYW 704



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 143/501 (28%), Positives = 248/501 (49%), Gaps = 10/501 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M      P +  ++ LLK C  + +   GK +H  +  S    N   +  ++++Y+KC  
Sbjct: 21  MKHDSVRPVVYNFTYLLKLCGDNSDLKRGKEIHGSVITSGFSWNLFAMTGVVNMYAKCRQ 80

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +N+A  +F  M  +RD+V W++MIS Y   G    A+ + + M E G  P+     +++ 
Sbjct: 81  INDAYNMFDRM-PERDLVCWNTMISGYAQNGFAKVALMLVLRMSEEGHRPDSITIVSILP 139

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A ++T  + IG  ++G++L+ G F+S V V  AL+DM+ K GSV +  A  +FD M  + 
Sbjct: 140 AVADTRLLRIGMAVHGYVLRAG-FESLVNVSTALVDMYSKCGSVSI--ARVIFDGMDHRT 196

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  MI    Q G    A+ +F  M+  G  P   T+ G + AC++L     GK +H 
Sbjct: 197 VVSWNSMIDGYVQSGDAEGAMLIFQKMLDEGVQPTNVTVMGALHACADLGDLERGKFVHK 256

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
              +  L  DV V  SL+ MY+KC     VD +  +F  + +  ++SW A+I GY Q+G 
Sbjct: 257 LVDQLKLDSDVSVMNSLISMYSKCK---RVDIAADIFKNLRNKTLVSWNAMILGYAQNGC 313

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            + EA+  F +M    + P+ FT  SV+ A   L     A+ ++   ++R    +  V  
Sbjct: 314 VN-EALNAFCEMQSRNIKPDSFTMVSVIPALAELSIPRQAKWIHGLVIRRFLDKNVFVMT 372

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +L+ MYA+ G +  ARK F+ +  ++++++N M+D Y  +   + + EL  E++   +  
Sbjct: 373 ALVDMYAKCGAIHTARKLFDMMNARHVITWNAMIDGYGTHGLGKTSVELFKEMKKGTIKP 432

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
           +  TF   LS  S  G + +G      + K  G E     Y A++ +  R   +  A+  
Sbjct: 433 NDITFLCALSACSHSGLVEEGLCFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDF 492

Query: 547 FKEMEDRNVISWTSMITGFAK 567
            ++M  +  I+    + G  K
Sbjct: 493 IQKMPIKPGITVYGAMLGACK 513



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 143/479 (29%), Positives = 239/479 (49%), Gaps = 26/479 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  + A+  +  M+++G+ PD  T   +L +   +R   +G  VH  + R+  E  
Sbjct: 106 YAQNGFAKVALMLVLRMSEEGHRPDSITIVSILPAVADTRLLRIGMAVHGYVLRAGFESL 165

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +L+ +YSKCG ++ A  IF  M + R +VSW+SMI  YV  G    A+ +F +ML
Sbjct: 166 VNVSTALVDMYSKCGSVSIARVIFDGM-DHRTVVSWNSMIDGYVQSGDAEGAMLIFQKML 224

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G  P        + AC++  ++  G  ++  + +    DSDV V  +LI M+ K   V
Sbjct: 225 DEGVQPTNVTVMGALHACADLGDLERGKFVHKLVDQLK-LDSDVSVMNSLISMYSKCKRV 283

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+  A  +F  +  K  V W  MI    Q GC  +A+  F +M      PD FT+  V+ 
Sbjct: 284 DI--AADIFKNLRNKTLVSWNAMILGYAQNGCVNEALNAFCEMQSRNIKPDSFTMVSVIP 341

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A +EL +    K +H   IR  L  +V V  +LVDMYAKC   G++  +RK+FD M   +
Sbjct: 342 ALAELSIPRQAKWIHGLVIRRFLDKNVFVMTALVDMYAKC---GAIHTARKLFDMMNARH 398

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ-- 409
           V++W A+I GY  + G  K +V+LF +M +G + PN  TF   L AC +   S + E+  
Sbjct: 399 VITWNAMIDGY-GTHGLGKTSVELFKEMKKGTIKPNDITFLCALSACSH---SGLVEEGL 454

Query: 410 VYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--Y 464
            +  ++K+   ++  + +  +++ +  R+GR+  A    + +  +  +  Y  M+ A   
Sbjct: 455 CFFESMKKDYGIEPTMDHYGAMVDLLGRAGRLNQAWDFIQKMPIKPGITVYGAMLGACKI 514

Query: 465 AKN--LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
            KN  L  + AFE+     D   G      A++ + AS  G + K   I   + KSG +
Sbjct: 515 HKNVDLGEKAAFEIFKLNPDD--GGYHVLLANIYATASMWGKVAKVRTI---MEKSGLQ 568


>gi|15227144|ref|NP_179798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206010|sp|Q9SHZ8.1|PP168_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g22070
 gi|4587589|gb|AAD25817.1| hypothetical protein [Arabidopsis thaliana]
 gi|330252165|gb|AEC07259.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 786

 Score =  523 bits (1346), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 280/695 (40%), Positives = 416/695 (59%), Gaps = 68/695 (9%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D++S  + FD++ ++++V WT MI     +G    AIR+  DM+  G  P +FTL+ V++
Sbjct: 95  DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           + +      +GK++HS+ ++ GL  +V V  SL++MYAKC   G    ++ VFDRM+  +
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC---GDPMMAKFVFDRMVVRD 211

Query: 352 VMSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQ 381
           + SW A+I  ++Q G                              G D  A+ +FS M++
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271

Query: 382 GQV-APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
             + +P+ FT ASVL AC NL    + +Q+++H V  G  +   V N+LISMY+R G +E
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331

Query: 441 DARKAFE---------------------------------SLFEKNLVSYNTMVDAYAKN 467
            AR+  E                                 SL ++++V++  M+  Y ++
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
            +  +A  L   +   G   ++YT A++LS ASS+ ++  G+QIH   +KSG   +  + 
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451

Query: 528 NALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           NALI+MY++  N+ +A + F  +  +R+ +SWTSMI   A+HG A  ALE+F  ML +G+
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ ITY+ V SAC+HAGL+++G ++F  M D   I+  + HYACMVDL GR+G L EA 
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           EFI  MP+  DV+ W + L ACRVH + +LGK AAE +L  +P++  A+  L+NLY++ G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE  A IRK MK+  + KE G SWIE  +KVH F V + +HP+  EIY  + ++  +IK
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           + GY+PDT  VLH+LEEE K Q L  HSEK+A+AFGLIST     +R+ KNLRVC DCHT
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK+IS + GREI++RD+ RFHH KDG CSC DYW
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786



 Score =  199 bits (506), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 156/585 (26%), Positives = 277/585 (47%), Gaps = 104/585 (17%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM-- 139
           +LL KS  +S      +LVH  + +S L  +  ++N+L+++YSK G    A K+F  M  
Sbjct: 18  NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77

Query: 140 ----------------GN------------KRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
                           G+            +RD VSW++MI  Y N G+   AI +  +M
Sbjct: 78  RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK--- 228
           ++ G  P ++  + V+ + + T  +  G  ++ F++K G    +V V  +L++M+ K   
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGD 196

Query: 229 -----------------------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
                                        G +DL  A   F++M E++ V W  MI+   
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ--FEQMAERDIVTWNSMISGFN 254

Query: 260 QLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           Q G    A+ +F  M+    L PDRFTL+ V+SAC+ LE    GKQ+HS  + TG  +  
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314

Query: 319 CVGCSLVDMYAKC--------------TVD----------------GSVDDSRKVFDRML 348
            V  +L+ MY++C              T D                G ++ ++ +F  + 
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           D +V++WTA+I GY Q G    EA+ LF  M+ G   PN +T A++L    +L   +  +
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKN 467
           Q++  AVK G      V N+LI+MYA++G +  A +AF+ +  E++ VS+ +M+ A A++
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ---IHARIIKSGFESNH 524
            ++E+A EL   +   G+     T+  + S  +  G + +G Q   +   + K     +H
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553

Query: 525 CIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
             Y  ++ ++ R   ++ A +  ++M  + +V++W S+++    H
Sbjct: 554 --YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 160/572 (27%), Positives = 253/572 (44%), Gaps = 107/572 (18%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ + N G+  KAI  +  M ++G  P   T + +L S   +R    GK VHS + +  L
Sbjct: 118 IVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGL 177

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSM------------------------------ 139
             N  + NSL+++Y+KCGD   A  +F  M                              
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQ 237

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAI 198
             +RDIV+W+SMIS +  RG  + A+ +F +ML      P+ +  ++V+ AC+N E + I
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV-------------------------- 231
           G  I+  ++  G FD    V  ALI M+ + G V                          
Sbjct: 298 GKQIHSHIVTTG-FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356

Query: 232 -----DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
                D+  A  +F  + +++ V WT MI    Q G   +AI LF  M+  G  P+ +TL
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + ++S  S L   + GKQ+H  A+++G    V V  +L+ MYAK    G++  + + FD 
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA---GNITSASRAFDL 473

Query: 347 M-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           +  + + +SWT++I    Q  G  +EA++LF  M+   + P+H T+  V  AC       
Sbjct: 474 IRCERDTVSWTSMIIALAQH-GHAEEALELFETMLMEGLRPDHITYVGVFSAC------- 525

Query: 406 VAEQVYTHA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
                 THA  V +GR   D               M+D  K   +L       Y  MVD 
Sbjct: 526 ------THAGLVNQGRQYFDM--------------MKDVDKIIPTLSH-----YACMVDL 560

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           + +    ++A E    IE   +     T+ SLLS       I  G+    R++    E N
Sbjct: 561 FGRAGLLQEAQEF---IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE-N 616

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
              Y+AL ++YS C   E A ++ K M+D  V
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 122/539 (22%), Positives = 230/539 (42%), Gaps = 109/539 (20%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQ--------LHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           P   +LS ++  C+ L   +  K         +H   I++GL   V +  +L+++Y+K  
Sbjct: 4   PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT- 62

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-------------------------- 366
             G    +RK+FD M      SW  +++ Y + G                          
Sbjct: 63  --GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120

Query: 367 ----GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
               G+  +A+++  DM++  + P  FT  +VL +          ++V++  VK G   +
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180

Query: 423 DCVGNSLISMYARS-------------------------------GRMEDARKAFESLFE 451
             V NSL++MYA+                                G+M+ A   FE + E
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           +++V++N+M+  + +     +A ++  + + D+ +    +T AS+LS  +++  +  G+Q
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ------------------------- 545
           IH+ I+ +GF+ +  + NALISMYSRC  VE A +                         
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360

Query: 546 --------VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
                   +F  ++DR+V++WT+MI G+ +HG    A+ +F  M+  G +PN  T  A+L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           S  S    +S G K       + G +  +     ++ +  ++G++T A      +    D
Sbjct: 421 SVASSLASLSHG-KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
            + W + + A   HG  E      E +L +  +    HI    ++++  H   V   R+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD--HITYVGVFSACTHAGLVNQGRQ 536



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 87/391 (22%), Positives = 173/391 (44%), Gaps = 104/391 (26%)

Query: 385 APNHFTFASVLKACGNLLDSNV--------AEQVYTHAVKRGRALDDCVGNSLISMYARS 436
           AP   + +++L+ C NLL  +V        A+ V+   +K G      + N+L+++Y+++
Sbjct: 3   APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAK--NLNS------------------------ 470
           G    ARK F+ +  +   S+NT++ AY+K  +++S                        
Sbjct: 63  GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122

Query: 471 -----EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
                 KA  ++ ++   G+  + +T  ++L+  ++   +  G+++H+ I+K G   N  
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182

Query: 526 IYNALISMYSRCAN-------------------------------VEAAFQVFKEMEDRN 554
           + N+L++MY++C +                               ++ A   F++M +R+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACS-----------H 602
           +++W SMI+GF + G+  RAL+IF KML D  + P+  T  +VLSAC+           H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302

Query: 603 AGLISEGW-------KHFRSMYDEHGIVQ--------------RMEHYACMVDLLGRSGS 641
           + +++ G+           SMY   G V+              ++E +  ++D   + G 
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           + +A     S+    DV+ W   +     HG
Sbjct: 363 MNQAKNIFVSLK-DRDVVAWTAMIVGYEQHG 392


>gi|255541924|ref|XP_002512026.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223549206|gb|EEF50695.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 810

 Score =  521 bits (1343), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 286/799 (35%), Positives = 455/799 (56%), Gaps = 10/799 (1%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           + L+T    + D  T+  ++K+C  S +  LG+++H ++ +  L  +  + N+LI++Y K
Sbjct: 19  VKLITDTEFNADNFTFPCVIKACTGSLDRGLGEVIHGMVIKMGLLLDVFVGNALIAMYGK 78

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCF 183
            G ++ A K+F  M   R++VSW+S+IS +   G   D   M VEM+  E G  P+    
Sbjct: 79  FGFVDAAVKVFHYM-PVRNLVSWNSIISGFSENGFSKDCFDMLVEMMAGEEGLLPDIATL 137

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
             V+  C+   +V +G  I+G  +K G    DV V  +L+DM+ K    L  A  +FDK 
Sbjct: 138 VTVLPVCAREVDVQMGIRIHGLAVKLG-LSEDVRVNNSLVDMYSKCGY-LTEAQMLFDKN 195

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSG 302
             KN V W  MI      G   +A  LF +M +   +  +  T+  ++ AC E+    S 
Sbjct: 196 NRKNAVSWNTMIGGLCTKGYIFEAFNLFREMQMQEDIEVNEVTVLNILPACLEISQLRSL 255

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K+LH ++IR G   D  V    V  YAKC   G +  + +VF  M    V SW A+I G 
Sbjct: 256 KELHGYSIRHGFQYDELVANGFVAAYAKC---GMLICAERVFYSMETKTVNSWNALIGGC 312

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q+G   ++A+ L+  M    + P+ FT  S+L A  +L      ++V+   ++ G  +D
Sbjct: 313 AQNG-DPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEID 371

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             +G SL+S+Y   G    AR  F+ + EK+ VS+N M+  Y++N   E A  L  ++  
Sbjct: 372 SFIGISLLSLYIHCGESSSARLLFDGMEEKSSVSWNAMISGYSQNGLPEDALILFRKLVS 431

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G   S     S+L   S   A+  G++ H   +K+    +  +  + I MY++   ++ 
Sbjct: 432 DGFQPSDIAVVSVLGACSQQSALRLGKETHCYALKALLMEDVFVACSTIDMYAKSGCIKE 491

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           +  VF  ++++++ SW ++I  +  HG    ++E+F +M   G  P+G T+I +L+ CSH
Sbjct: 492 SRSVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCSH 551

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGL+ EG K+F  M + HGI  ++EHYAC++D+LGR+G L +AL  +  MP   D  VW 
Sbjct: 552 AGLVEEGLKYFNEMQNFHGIEPKLEHYACVMDMLGRAGRLDDALRLVHEMPEQPDSRVWS 611

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
           + L  CR  G+ E+G+  AE +LE +P++   ++ LSNLYA +G W+ V  +R+ +K+  
Sbjct: 612 SLLSFCRNFGELEIGQIVAEKLLELEPKNVENYVSLSNLYAGSGRWDDVRRVRQMIKDIG 671

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           L K+AGCSWIE   KVH F  G+   P++ E+     +L  K+ + GY P+T+ VLH+++
Sbjct: 672 LQKDAGCSWIELGGKVHSFVAGDNLLPQSKEMSMTWRKLEKKMCKIGYKPNTSAVLHDVD 731

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE+K++ L  HSEK+A+ FGL++T+K   +R+FKNLR+C DCH A K++S VTGREI++R
Sbjct: 732 EEKKIEKLRGHSEKLAICFGLLNTTKGTTLRIFKNLRICVDCHNASKFMSEVTGREIIIR 791

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+ RFHH KDG CSC DYW
Sbjct: 792 DNKRFHHFKDGLCSCGDYW 810



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 179/396 (45%), Gaps = 51/396 (12%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  +KA+     MT  G  PD  T   LL +    ++   GK VH  + R  LE +S 
Sbjct: 314 QNGDPRKALNLYIQMTYSGLVPDWFTIGSLLLASAHLKSLRYGKEVHGFVLRHGLEIDSF 373

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           I  SL+SLY  CG+ + A  +F  M  K   VSW++MIS Y   G   DA+ +F +++  
Sbjct: 374 IGISLLSLYIHCGESSSARLLFDGMEEKSS-VSWNAMISGYSQNGLPEDALILFRKLVSD 432

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           GF P++    +V+ ACS    + +G   + + LK      DV V C+ IDM+ K     E
Sbjct: 433 GFQPSDIAVVSVLGACSQQSALRLGKETHCYALK-ALLMEDVFVACSTIDMYAKSGCIKE 491

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           S   VFD +  K+   W  +I      G   ++I LF  M   G +PD FT  G+++ CS
Sbjct: 492 SR-SVFDGLKNKDLASWNAIIAAYGVHGDGEESIELFERMRKVGQMPDGFTFIGILTVCS 550

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNV- 352
                      H+                           G V++  K F+ M + H + 
Sbjct: 551 -----------HA---------------------------GLVEEGLKYFNEMQNFHGIE 572

Query: 353 --MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
             +   A +   +   GR  +A++L  +M +    P+   ++S+L  C N  +  + + V
Sbjct: 573 PKLEHYACVMDMLGRAGRLDDALRLVHEMPE---QPDSRVWSSLLSFCRNFGELEIGQIV 629

Query: 411 YTHAVK-RGRALDDCVGNSLISMYARSGRMEDARKA 445
               ++   + +++ V  SL ++YA SGR +D R+ 
Sbjct: 630 AEKLLELEPKNVENYV--SLSNLYAGSGRWDDVRRV 663


>gi|334182623|ref|NP_001185013.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332191339|gb|AEE29460.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 928

 Score =  520 bits (1339), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 275/807 (34%), Positives = 467/807 (57%), Gaps = 12/807 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ + + G  ++ I     M  +G   + ++ SL++ SC   ++  LG+ +   + +S L
Sbjct: 115 MVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGL 174

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E    + NSLIS+    G+++ AN IF  M ++RD +SW+S+ ++Y   G   ++  +F 
Sbjct: 175 ESKLAVENSLISMLGSMGNVDYANYIFDQM-SERDTISWNSIAAAYAQNGHIEESFRIFS 233

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M       N    S ++    + ++   G  I+G ++K G FDS VCV   L+ M+   
Sbjct: 234 LMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMG-FDSVVCVCNTLLRMYAGA 292

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              +E A  VF +M  K+ + W  ++      G   DA+ L   MI SG   +  T +  
Sbjct: 293 GRSVE-ANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSA 351

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC   + F  G+ LH   + +GL  +  +G +LV MY K    G + +SR+V  +M  
Sbjct: 352 LAACFTPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKI---GEMSESRRVLLQMPR 408

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNV 406
            +V++W A+I GY +    DK A+  F  M    V+ N+ T  SVL AC   G+LL+   
Sbjct: 409 RDVVAWNALIGGYAEDEDPDK-ALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLER-- 465

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + ++ + V  G   D+ V NSLI+MYA+ G +  ++  F  L  +N++++N M+ A A 
Sbjct: 466 GKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQDLFNGLDNRNIITWNAMLAANAH 525

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           + + E+  +L+ ++   GV    ++F+  LS A+ +  + +G+Q+H   +K GFE +  I
Sbjct: 526 HGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAVLEEGQQLHGLAVKLGFEHDSFI 585

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +NA   MYS+C  +    ++     +R++ SW  +I+   +HG+       F++ML  GI
Sbjct: 586 FNAAADMYSKCGEIGEVVKMLPPSVNRSLPSWNILISALGRHGYFEEVCATFHEMLEMGI 645

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP  +T++++L+ACSH GL+ +G  ++  +  + G+   +EH  C++DLLGRSG L EA 
Sbjct: 646 KPGHVTFVSLLTACSHGGLVDKGLAYYDMIARDFGLEPAIEHCICVIDLLGRSGRLAEAE 705

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            FI  MP+  + LVWR+ L +C++HG+ + G+ AAE + + +P+D + ++L SN++A+ G
Sbjct: 706 TFISKMPMKPNDLVWRSLLASCKIHGNLDRGRKAAENLSKLEPEDDSVYVLSSNMFATTG 765

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE V N+RK+M  +N+ K+  CSW++  +KV  F +G+ +HP+T+EIYA+L+ +   IK
Sbjct: 766 RWEDVENVRKQMGFKNIKKKQACSWVKLKDKVSSFGIGDRTHPQTMEIYAKLEDIKKLIK 825

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+ DT+  L + +EEQK   L+ HSE++A+A+ L+ST +   +R+FKNLR+C DCH+
Sbjct: 826 ESGYVADTSQALQDTDEEQKEHNLWNHSERLALAYALMSTPEGSTVRIFKNLRICSDCHS 885

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDG 853
             K++S V GR IVLRD  RFHH + G
Sbjct: 886 VYKFVSRVIGRRIVLRDQYRFHHFERG 912



 Score =  231 bits (590), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 162/618 (26%), Positives = 313/618 (50%), Gaps = 35/618 (5%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRN-FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M   G  P     + L+ +C RS + F  G  VH  + +S L  +  +  +++ LY   G
Sbjct: 32  MCDLGIKPSSFVIASLVTACGRSGSMFREGVQVHGFVAKSGLLSDVYVSTAILHLYGVYG 91

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            ++ + K+F+ M + R++VSW+S++  Y ++G+  + I ++  M   G   NE   S VI
Sbjct: 92  LVSCSRKVFEEMPD-RNVVSWTSLMVGYSDKGEPEEVIDIYKGMRGEGVGCNENSMSLVI 150

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEK 246
            +C   ++ ++G  I G ++K G  +S + V  +LI M   GS+ +++ A  +FD+M+E+
Sbjct: 151 SSCGLLKDESLGRQIIGQVVKSG-LESKLAVENSLISML--GSMGNVDYANYIFDQMSER 207

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           +T+ W  +     Q G   ++ R+F  M       +  T+S ++S    ++    G+ +H
Sbjct: 208 DTISWNSIAAAYAQNGHIEESFRIFSLMRRFHDEVNSTTVSTLLSVLGHVDHQKWGRGIH 267

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
              ++ G    VCV  +L+ MYA     G   ++  VF +M   +++SW +++  +V   
Sbjct: 268 GLVVKMGFDSVVCVCNTLLRMYAGA---GRSVEANLVFKQMPTKDLISWNSLMASFVND- 323

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           GR  +A+ L   MI    + N+ TF S L AC           ++   V  G   +  +G
Sbjct: 324 GRSLDALGLLCSMISSGKSVNYVTFTSALAACFTPDFFEKGRILHGLVVVSGLFYNQIIG 383

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+L+SMY + G M ++R+    +  +++V++N ++  YA++ + +KA      +   GV 
Sbjct: 384 NALVSMYGKIGEMSESRRVLLQMPRRDVVAWNALIGGYAEDEDPDKALAAFQTMRVEGVS 443

Query: 487 TSAYTFASLLSGASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
           ++  T  S+LS     G  + +G+ +HA I+ +GFES+  + N+LI+MY++C ++ ++  
Sbjct: 444 SNYITVVSVLSACLLPGDLLERGKPLHAYIVSAGFESDEHVKNSLITMYAKCGDLSSSQD 503

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F  +++RN+I+W +M+   A HG     L++  KM + G+  +  ++   LSA +   +
Sbjct: 504 LFNGLDNRNIITWNAMLAANAHHGHGEEVLKLVSKMRSFGVSLDQFSFSEGLSAAAKLAV 563

Query: 606 ISEGWKHFRSMYDEHGIVQRM--EH----YACMVDLLGRSGSLTEALEFI-----RSMPL 654
           + EG +        HG+  ++  EH    +    D+  + G + E ++ +     RS+P 
Sbjct: 564 LEEGQQL-------HGLAVKLGFEHDSFIFNAAADMYSKCGEIGEVVKMLPPSVNRSLP- 615

Query: 655 SADVLVWRTFLGACRVHG 672
                 W   + A   HG
Sbjct: 616 -----SWNILISALGRHG 628



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 147/535 (27%), Positives = 273/535 (51%), Gaps = 10/535 (1%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV-AIGHI 201
           R+ VSW++M+S  V  G  ++ +  F +M +LG  P+ +  ++++ AC  + ++   G  
Sbjct: 4   RNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFREGVQ 63

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++GF+ K G   SDV V  A++ ++ V G V    + KVF++M ++N V WT ++   + 
Sbjct: 64  VHGFVAKSGLL-SDVYVSTAILHLYGVYGLVS--CSRKVFEEMPDRNVVSWTSLMVGYSD 120

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G P + I ++  M   G   +  ++S V+S+C  L+  + G+Q+    +++GL   + V
Sbjct: 121 KGEPEEVIDIYKGMRGEGVGCNENSMSLVISSCGLLKDESLGRQIIGQVVKSGLESKLAV 180

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             SL+ M       G+VD +  +FD+M + + +SW +I   Y Q+ G  +E+ ++FS M 
Sbjct: 181 ENSLISMLGSM---GNVDYANYIFDQMSERDTISWNSIAAAYAQN-GHIEESFRIFSLMR 236

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +     N  T +++L   G++        ++   VK G     CV N+L+ MYA +GR  
Sbjct: 237 RFHDEVNSTTVSTLLSVLGHVDHQKWGRGIHGLVVKMGFDSVVCVCNTLLRMYAGAGRSV 296

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +A   F+ +  K+L+S+N+++ ++  +  S  A  LL  +  +G   +  TF S L+   
Sbjct: 297 EANLVFKQMPTKDLISWNSLMASFVNDGRSLDALGLLCSMISSGKSVNYVTFTSALAACF 356

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           +     KG  +H  ++ SG   N  I NAL+SMY +   +  + +V  +M  R+V++W +
Sbjct: 357 TPDFFEKGRILHGLVVVSGLFYNQIIGNALVSMYGKIGEMSESRRVLLQMPRRDVVAWNA 416

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I G+A+     +AL  F  M  +G+  N IT ++VLSAC   G + E  K   +     
Sbjct: 417 LIGGYAEDEDPDKALAAFQTMRVEGVSSNYITVVSVLSACLLPGDLLERGKPLHAYIVSA 476

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           G          ++ +  + G L+ + +    +  + +++ W   L A   HG  E
Sbjct: 477 GFESDEHVKNSLITMYAKCGDLSSSQDLFNGLD-NRNIITWNAMLAANAHHGHGE 530



 Score = 48.9 bits (115), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 29/126 (23%), Positives = 57/126 (45%), Gaps = 1/126 (0%)

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  RN +SW +M++G  + G     +E F KM   GIKP+     ++++AC  +G +   
Sbjct: 1   MPVRNEVSWNTMMSGIVRVGLYLEGMEFFRKMCDLGIKPSSFVIASLVTACGRSGSMFRE 60

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
                    + G++  +     ++ L G  G ++ + +    MP   +V+ W + +    
Sbjct: 61  GVQVHGFVAKSGLLSDVYVSTAILHLYGVYGLVSCSRKVFEEMP-DRNVVSWTSLMVGYS 119

Query: 670 VHGDTE 675
             G+ E
Sbjct: 120 DKGEPE 125


>gi|225425015|ref|XP_002267613.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930 [Vitis vinifera]
 gi|297738214|emb|CBI27415.3| unnamed protein product [Vitis vinifera]
          Length = 743

 Score =  520 bits (1338), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/716 (37%), Positives = 428/716 (59%), Gaps = 42/716 (5%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P  +  + +I A     N+A  H ++  + +   F  +      ++ ++ K  + L    
Sbjct: 38  PETFLSNNLITAYYKLGNLAYAHHVFDHIPQPNLFSWN-----TILSVYSKLGL-LSQMQ 91

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSEL 296
           ++F+ M  ++ V W L I+     G   DA+R++  M+    +  +R T S ++  CS+ 
Sbjct: 92  QIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKLMLKDAAMNLNRITFSTMLILCSKF 151

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV---- 352
                G+Q++   ++ G   DV VG  LVDMY K    G + D+++ FD M + NV    
Sbjct: 152 RCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTKL---GLIYDAKRYFDEMPERNVVMCN 208

Query: 353 ---------------------------MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
                                      +SWT +ITG +Q+G  ++EA+ +F +M     A
Sbjct: 209 TMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGLMQNG-LEREALDMFREMRLAGFA 267

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            + FTF SVL ACG+LL     +Q++ + ++     +  VG++L+ MY++   ++ A   
Sbjct: 268 MDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNVFVGSALVDMYSKCRSIKSAETV 327

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F+ + +KN++S+  M+  Y +N  SE+A ++  E++  GV    +T  S++S  +++ ++
Sbjct: 328 FKRMPQKNVISWTAMLVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASL 387

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
            +G Q H R + SG  S   + NALI++Y +C + E + ++F EM  R+ +SWT+++ G+
Sbjct: 388 EEGAQFHCRALVSGLISFITVSNALITLYGKCGSTENSHRLFTEMNIRDEVSWTALLAGY 447

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           A+ G A   + +F +MLA G+KP+G+T+I VLSACS AGL+ +G ++F SM  EHGI+  
Sbjct: 448 AQFGKANETIGLFERMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPI 507

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           ++H  C++DLLGR+G L EA  FI +MP   DV+ W T L +CRVHGD E+GK AA+ ++
Sbjct: 508 VDHCTCIIDLLGRAGRLEEARNFINNMPCHPDVVGWATLLSSCRVHGDMEIGKWAADSLI 567

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
             +PQ+PA+++LLS+LYAS G W+ VA +R+ M+++ + KE G SWI+   KVH F   +
Sbjct: 568 ALEPQNPASYVLLSSLYASKGKWDKVAQLRRGMRDKRVRKEPGYSWIKYKGKVHVFSADD 627

Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
            S P   +IYAEL++L  K+ E GY+PD + VLH++EE +K++ L  HSEK+A+AFGLI 
Sbjct: 628 QSSPFLGQIYAELEKLNYKMIEEGYVPDMSSVLHDVEESEKIKMLNHHSEKLAIAFGLIF 687

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
                PIRV KNLRVCGDCH A K+IS +T REI++RD+ RFH  KDG CSC D+W
Sbjct: 688 VPPGLPIRVIKNLRVCGDCHNATKFISKITQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  240 bits (613), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 174/556 (31%), Positives = 265/556 (47%), Gaps = 76/556 (13%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI-------------------- 120
           Y+ LLK C  S+N    K +H L+ ++  +P + + N+LI                    
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 121 -----------SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                      S+YSK G L++  +IF  M   RD VSW+  IS Y N G   DA+ ++ 
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLM-PFRDGVSWNLAISGYANYGSCSDAVRVYK 126

Query: 170 EML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            ML +     N   FS ++  CS    V +G  I G +LK G F SDV VG  L+DM+ K
Sbjct: 127 LMLKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFG-FGSDVFVGSPLVDMYTK 185

Query: 229 GSVDLESAYKVFDKMTEKNTV-------------------------------GWTLMITR 257
             + +  A + FD+M E+N V                                WT+MIT 
Sbjct: 186 LGL-IYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITG 244

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G  R+A+ +F +M L+GF  D+FT   V++AC  L     GKQ+H++ IRT    +
Sbjct: 245 LMQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDN 304

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V VG +LVDMY+KC    S+  +  VF RM   NV+SWTA++ GY Q+ G  +EAVK+F 
Sbjct: 305 VFVGSALVDMYSKCR---SIKSAETVFKRMPQKNVISWTAMLVGYGQN-GFSEEAVKIFF 360

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           +M +  V P+ FT  SV+ +C NL       Q +  A+  G      V N+LI++Y + G
Sbjct: 361 EMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALITLYGKCG 420

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
             E++ + F  +  ++ VS+  ++  YA+   + +   L   +   G+     TF  +LS
Sbjct: 421 STENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLS 480

Query: 498 GASSIGAIGKGEQIHARIIKS-GFES--NHCIYNALISMYSRCANVEAAFQVFKEME-DR 553
             S  G + KG Q    +IK  G     +HC    +I +  R   +E A      M    
Sbjct: 481 ACSRAGLVEKGLQYFESMIKEHGIMPIVDHC--TCIIDLLGRAGRLEEARNFINNMPCHP 538

Query: 554 NVISWTSMITGFAKHG 569
           +V+ W ++++    HG
Sbjct: 539 DVVGWATLLSSCRVHG 554



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 155/310 (50%), Gaps = 10/310 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G  ++A+     M   G   D  T+  +L +C        GK +H+ + R+  + N 
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQIHAYVIRTDHKDNV 305

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++L+ +YSKC  +  A  +FK M  K +++SW++M+  Y   G   +A+ +F EM  
Sbjct: 306 FVGSALVDMYSKCRSIKSAETVFKRMPQK-NVISWTAMLVGYGQNGFSEEAVKIFFEMQR 364

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G  P+++   +VI +C+N  ++  G   +   L  G   S + V  ALI ++ K GS  
Sbjct: 365 NGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI-SFITVSNALITLYGKCGST- 422

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E+++++F +M  ++ V WT ++    Q G   + I LF  M+  G  PD  T  GV+SA
Sbjct: 423 -ENSHRLFTEMNIRDEVSWTALLAGYAQFGKANETIGLFERMLAHGLKPDGVTFIGVLSA 481

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCS-LVDMYAKCTVDGSVDDSRKVFDRMLDH- 350
           CS   L   G Q     I+    + +   C+ ++D+  +    G ++++R   + M  H 
Sbjct: 482 CSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRA---GRLEEARNFINNMPCHP 538

Query: 351 NVMSWTAIIT 360
           +V+ W  +++
Sbjct: 539 DVVGWATLLS 548



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 82/367 (22%), Positives = 158/367 (43%), Gaps = 84/367 (22%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           +AS+LK C    +   A++++   +K  +  +  + N+LI+ Y + G +  A   F+ + 
Sbjct: 8   YASLLKLCCESQNQTQAKKLHCLILKTIKQPETFLSNNLITAYYKLGNLAYAHHVFDHIP 67

Query: 451 EKNLVSYNTMVDAYAK-----------NL-----------------------NSEKAFEL 476
           + NL S+NT++  Y+K           NL                       ++ + ++L
Sbjct: 68  QPNLFSWNTILSVYSKLGLLSQMQQIFNLMPFRDGVSWNLAISGYANYGSCSDAVRVYKL 127

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS- 535
           +  ++D  +  +  TF+++L   S    +  G QI+ +I+K GF S+  + + L+ MY+ 
Sbjct: 128 M--LKDAAMNLNRITFSTMLILCSKFRCVDLGRQINGQILKFGFGSDVFVGSPLVDMYTK 185

Query: 536 ------------------------------RCANVEAAFQVFKEMEDRNVISWTSMITGF 565
                                         RC  +E + ++F  +++R+ ISWT MITG 
Sbjct: 186 LGLIYDAKRYFDEMPERNVVMCNTMITGLMRCGMIEESQRLFCGLKERDSISWTIMITGL 245

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            ++G    AL++F +M   G   +  T+ +VL+AC     + EG +        H  V R
Sbjct: 246 MQNGLEREALDMFREMRLAGFAMDQFTFGSVLTACGSLLALGEGKQI-------HAYVIR 298

Query: 626 MEHY------ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            +H       + +VD+  +  S+  A    + MP   +V+ W   L     +G     + 
Sbjct: 299 TDHKDNVFVGSALVDMYSKCRSIKSAETVFKRMP-QKNVISWTAMLVG---YGQNGFSEE 354

Query: 680 AAEMILE 686
           A ++  E
Sbjct: 355 AVKIFFE 361



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 95/210 (45%), Gaps = 3/210 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ +  +G  ++A+     M + G  PD  T   ++ SC    +   G   H     S L
Sbjct: 343 LVGYGQNGFSEEAVKIFFEMQRNGVEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 402

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                + N+LI+LY KCG    ++++F  M N RD VSW+++++ Y   GK  + I +F 
Sbjct: 403 ISFITVSNALITLYGKCGSTENSHRLFTEM-NIRDEVSWTALLAGYAQFGKANETIGLFE 461

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            ML  G  P+   F  V+ ACS    V  G   +  ++K       V     +ID+  + 
Sbjct: 462 RMLAHGLKPDGVTFIGVLSACSRAGLVEKGLQYFESMIKEHGIMPIVDHCTCIIDLLGRA 521

Query: 230 SVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
              LE A    + M    + VGW  +++ C
Sbjct: 522 G-RLEEARNFINNMPCHPDVVGWATLLSSC 550


>gi|302142249|emb|CBI19452.3| unnamed protein product [Vitis vinifera]
          Length = 921

 Score =  519 bits (1337), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 291/832 (34%), Positives = 475/832 (57%), Gaps = 37/832 (4%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A      M  +G  P+  + + LLK    +    L + +H    R+    +S I 
Sbjct: 100 GNFAQAFGLFQKMMGEGLQPNGFSLASLLKVSCSTGEIGLCRQLHGWSIRTGFGLDSGIR 159

Query: 117 NSLISLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            + I++YS+CG L +A ++F        DI+ W+S+I++Y+  G  V+ + +F +M+ +G
Sbjct: 160 AAWITMYSRCGVLEDAQRVFDETSLLALDILLWNSIIAAYIFHGCWVEVLRLFCKMVSVG 219

Query: 176 F-CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P E  +++V+ AC ++     G +++G ++K G   +++    +L+  + K   +L+
Sbjct: 220 VVAPTELTYASVVNACGSSGEEKYGAMVHGRIIKAGLEATNLWN--SLVTFYGKCG-NLQ 276

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM--ILSGFLPDRFTLSGVVSA 292
            A ++F++++ K+ V W  MI    Q G   +A+ LF  M  +     P+R T   ++SA
Sbjct: 277 HASQLFERISRKDVVSWNAMIAANEQRGEGENALGLFRRMLKVEPPVQPNRVTFLSLLSA 336

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            S L     G+++H+   R  L +D  +  SL+  Y+KC     V  +R++F+R+L  ++
Sbjct: 337 VSGLSALRCGREIHAHIFRLSLEVDTSITNSLITFYSKCR---EVGKAREIFERLLLRDI 393

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG----NLLDSNVAE 408
           +SW +++ GY Q+  + +    +F  M+   + P+  +   +  A       L+     +
Sbjct: 394 ISWNSMLAGYEQNEQQGR-CFDIFKRMMLSGIEPDSHSLTIIFNAASRDSSGLIYFRRGK 452

Query: 409 QVYTHAVKR----GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
           +++ + ++R    G +L   V N+++ MYA+  R+ DA K F+ +  ++  S+N M+D Y
Sbjct: 453 EIHGYILRRITPGGVSLS--VSNAILKMYAKFNRIADAEKIFKGMKNRDSYSWNAMMDGY 510

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           ++N   E    +  +I   G      + + LL+    + ++  G+Q HA + K  F    
Sbjct: 511 SRNAKFEDVLMIFLDILKQGFPLDHVSLSILLTSCGRLVSLQLGKQFHAVVAKL-FNGQD 569

Query: 525 C--------IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           C        I NALISMYS+C +++ A QVF +ME ++V SWT+MITG A HG A  AL+
Sbjct: 570 CPHQDSLLSINNALISMYSKCGSIKDAAQVFLKMERKDVFSWTAMITGCAHHGLAVEALQ 629

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M  DGIKPN +T++A+L AC+H GL+ EG  +F SMY+++G+   +EHYACM+DL 
Sbjct: 630 LFERMKTDGIKPNQVTFLALLMACAHGGLVQEGSYYFDSMYNDYGLSPSIEHYACMIDLF 689

Query: 637 GRSGSLTEA---LEFIRSM--PLSADVL-VWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           GRSG    A   +EF  ++  P   D+L +W+  LGAC      +LG  AA  ILE +P+
Sbjct: 690 GRSGQFDRAKSLVEFGITLFKPYHDDILNLWKVLLGACHASKQLDLGVEAATKILELEPE 749

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D A +ILL+NLYAS+G WE    +RK M+++ L KE GCSWI+  N+ H F  G+  HP+
Sbjct: 750 DEATYILLANLYASSGLWEDAIKVRKAMRDKGLRKEVGCSWIDTGNRRHVFVAGDVYHPQ 809

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS-KS 809
             EIY +L QL    +  GY+P T  VLH+++E +K   L  HSEK+AV+FGL++    +
Sbjct: 810 RKEIYEKLAQLNYSCRRMGYVPMTELVLHDVDETEKEAILGCHSEKLAVSFGLLNCGVGN 869

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             IRV KNLRVC DCH+ +K+ S++  REI+LRDS RFH  +DG CSC DYW
Sbjct: 870 GVIRVMKNLRVCEDCHSWMKFASLLEKREILLRDSQRFHLFRDGSCSCGDYW 921



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 125/399 (31%), Positives = 216/399 (54%), Gaps = 15/399 (3%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS- 291
           L+ A ++FD    ++ + W+ +I   ++ G    A  LF  M+  G  P+ F+L+ ++  
Sbjct: 71  LKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLKV 130

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR--MLD 349
           +CS  E+    +QLH W+IRTG  LD  +  + + MY++C   G ++D+++VFD   +L 
Sbjct: 131 SCSTGEIGLC-RQLHGWSIRTGFGLDSGIRAAWITMYSRC---GVLEDAQRVFDETSLLA 186

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAE 408
            +++ W +II  Y+  G    E ++LF  M+  G VAP   T+ASV+ ACG+  +     
Sbjct: 187 LDILLWNSIIAAYIFHGCW-VEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGA 245

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+   +K G    + + NSL++ Y + G ++ A + FE +  K++VS+N M+ A  +  
Sbjct: 246 MVHGRIIKAGLEATN-LWNSLVTFYGKCGNLQHASQLFERISRKDVVSWNAMIAANEQRG 304

Query: 469 NSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             E A  L   +   +  V  +  TF SLLS  S + A+  G +IHA I +   E +  I
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            N+LI+ YS+C  V  A ++F+ +  R++ISW SM+ G+ ++    R  +IF +M+  GI
Sbjct: 365 TNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSGI 424

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           +P+  +   + +A S     S G  +FR   + HG + R
Sbjct: 425 EPDSHSLTIIFNAASRD---SSGLIYFRRGKEIHGYILR 460



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 147/564 (26%), Positives = 277/564 (49%), Gaps = 32/564 (5%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A ++F +  N RD++SWS++I++Y   G    A  +F +M+  G  PN +  +++++
Sbjct: 71  LKCAQQLFDNFPN-RDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK--MTEK 246
              +T  + +   ++G+ ++ G F  D  +  A I M+ +  V LE A +VFD+  +   
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTG-FGLDSGIRAAWITMYSRCGV-LEDAQRVFDETSLLAL 187

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQL 305
           + + W  +I      GC  + +RLF  M+  G + P   T + VV+AC        G  +
Sbjct: 188 DILLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACGSSGEEKYGAMV 247

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H   I+ GL     +  SLV  Y KC   G++  + ++F+R+   +V+SW A+I    Q 
Sbjct: 248 HGRIIKAGLE-ATNLWNSLVTFYGKC---GNLQHASQLFERISRKDVVSWNAMIAANEQR 303

Query: 366 GGRDKEAVKLFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            G  + A+ LF  M++ +  V PN  TF S+L A   L       +++ H  +    +D 
Sbjct: 304 -GEGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDT 362

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            + NSLI+ Y++   +  AR+ FE L  ++++S+N+M+  Y +N    + F++   +  +
Sbjct: 363 SITNSLITFYSKCREVGKAREIFERLLLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLS 422

Query: 484 GVGTSAYTFASLLSGAS--SIGAI--GKGEQIHA----RIIKSGFESNHCIYNALISMYS 535
           G+   +++   + + AS  S G I   +G++IH     RI   G   +  + NA++ MY+
Sbjct: 423 GIEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLS--VSNAILKMYA 480

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +   +  A ++FK M++R+  SW +M+ G++++      L IF  +L  G   + ++   
Sbjct: 481 KFNRIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSI 540

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY-------ACMVDLLGRSGSLTEALEF 648
           +L++C     +  G K F ++  +    Q   H          ++ +  + GS+ +A + 
Sbjct: 541 LLTSCGRLVSLQLG-KQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKCGSIKDAAQV 599

Query: 649 IRSMPLSADVLVWRTFLGACRVHG 672
              M    DV  W   +  C  HG
Sbjct: 600 FLKME-RKDVFSWTAMITGCAHHG 622



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 198/408 (48%), Gaps = 25/408 (6%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G     +F   L  +    P+  T+  LL +         G+ +H+ + R  LE ++ I
Sbjct: 305 EGENALGLFRRMLKVEPPVQPNRVTFLSLLSAVSGLSALRCGREIHAHIFRLSLEVDTSI 364

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            NSLI+ YSKC ++ +A +IF+ +   RDI+SW+SM++ Y    +Q     +F  M+  G
Sbjct: 365 TNSLITFYSKCREVGKAREIFERL-LLRDIISWNSMLAGYEQNEQQGRCFDIFKRMMLSG 423

Query: 176 FCPNEYCFSAVIRACSNTENVAI----GHIIYGFLL-KCGYFDSDVCVGCALIDMFVKGS 230
             P+ +  + +  A S   +  I    G  I+G++L +       + V  A++ M+ K +
Sbjct: 424 IEPDSHSLTIIFNAASRDSSGLIYFRRGKEIHGYILRRITPGGVSLSVSNAILKMYAKFN 483

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +  A K+F  M  +++  W  M+   ++     D + +FLD++  GF  D  +LS ++
Sbjct: 484 -RIADAEKIFKGMKNRDSYSWNAMMDGYSRNAKFEDVLMIFLDILKQGFPLDHVSLSILL 542

Query: 291 SACSELELFTSGKQLHSWAIRTGLALD-------VCVGCSLVDMYAKCTVDGSVDDSRKV 343
           ++C  L     GKQ H+   +     D       + +  +L+ MY+KC   GS+ D+ +V
Sbjct: 543 TSCGRLVSLQLGKQFHAVVAKLFNGQDCPHQDSLLSINNALISMYSKC---GSIKDAAQV 599

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNL 401
           F +M   +V SWTA+ITG     G   EA++LF  M    + PN  TF ++L AC  G L
Sbjct: 600 FLKMERKDVFSWTAMITGCAHH-GLAVEALQLFERMKTDGIKPNQVTFLALLMACAHGGL 658

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFE 447
           +        Y  ++     L   + +   +I ++ RSG+ + A+   E
Sbjct: 659 VQEG---SYYFDSMYNDYGLSPSIEHYACMIDLFGRSGQFDRAKSLVE 703



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 79/277 (28%), Positives = 140/277 (50%), Gaps = 15/277 (5%)

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           R++ A++ F++   ++++S++ ++ AY++  N  +AF L  ++   G+  + ++ ASLL 
Sbjct: 70  RLKCAQQLFDNFPNRDVISWSALIAAYSRCGNFAQAFGLFQKMMGEGLQPNGFSLASLLK 129

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE--MEDRNV 555
            + S G IG   Q+H   I++GF  +  I  A I+MYSRC  +E A +VF E  +   ++
Sbjct: 130 VSCSTGEIGLCRQLHGWSIRTGFGLDSGIRAAWITMYSRCGVLEDAQRVFDETSLLALDI 189

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFR 614
           + W S+I  +  HG     L +F KM++ G + P  +TY +V++AC      S G + + 
Sbjct: 190 LLWNSIIAAYIFHGCWVEVLRLFCKMVSVGVVAPTELTYASVVNACG-----SSGEEKYG 244

Query: 615 SMYDEHGIVQRMEH---YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC--R 669
           +M     I   +E    +  +V   G+ G+L  A +    +    DV+ W   + A   R
Sbjct: 245 AMVHGRIIKAGLEATNLWNSLVTFYGKCGNLQHASQLFERIS-RKDVVSWNAMIAANEQR 303

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
             G+  LG     M+  + P  P     LS L A +G
Sbjct: 304 GEGENALGLF-RRMLKVEPPVQPNRVTFLSLLSAVSG 339


>gi|357167109|ref|XP_003581008.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Brachypodium distachyon]
          Length = 921

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/819 (34%), Positives = 459/819 (56%), Gaps = 87/819 (10%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E N+V  N+++S Y + GD+  A ++F +M + RD+ SW+SM++ Y +  + VDA ++F 
Sbjct: 123 ERNTVAWNAMVSCYVQNGDITMARRLFDAMPS-RDVTSWNSMVTGYCHSRQMVDAWNLFK 181

Query: 170 EMLEL-------------------------------GFCPNEYCFSAVIRACSNTENVAI 198
           +M +                                G  P++  F++V+ A +  +++ +
Sbjct: 182 QMPQRNLVTWTVMISGYVRIEQHGKGWDIFRMMHHEGASPDQSNFASVLSAVTGLQDLGV 241

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
             ++   +LK G F+SDV +G ++++++ + +  L+ A K FD M E+N   W+ MI   
Sbjct: 242 LEVLRPLVLKTG-FESDVVIGTSILNVYTRDASALDIAIKFFDGMVERNEYTWSTMIAAL 300

Query: 259 TQLGCPRDAIRLF-LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
           +  G    AI ++  D + S  +P +  L   ++ C  +   T  + L          + 
Sbjct: 301 SHGGRIDAAIAVYGRDPVKS--IPSQTALLTGLARCGRI---TEARILFE-------QIP 348

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             +  S   M      +G VD+++++FDRM   N +SW  +I GY Q+G R +EA+ L  
Sbjct: 349 DPIVVSWNAMITGYMQNGMVDEAKELFDRMPFRNTISWAGMIAGYAQNG-RSEEALDLLQ 407

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            + +  + P+  +  S   AC ++       QV++ AVK G   +  V N+LISMY +  
Sbjct: 408 ALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFNSYVCNALISMYGKCR 467

Query: 438 RME-------------------------------DARKAFESLFEKNLVSYNTMVDAYAK 466
            ME                               DAR  F+++  +++VS+ T++ AYA+
Sbjct: 468 NMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLSRDVVSWTTIISAYAQ 527

Query: 467 NLNSEKAFE----LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
               ++A E    +LHE E      ++     LLS    +G+   G+QIH   IK G +S
Sbjct: 528 AERGDEAVEFFKTMLHEHEKP----NSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDS 583

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
              + NAL+SMY +C   ++  +VF  ME+R++ +W + ITG A+HG    A++++  M 
Sbjct: 584 ELIVANALMSMYFKCGCADS-HKVFDSMEERDIFTWNTFITGCAQHGLGREAIKMYEHME 642

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           + G+ PN +T++ +L+ACSHAGL+ EGW+ F+SM  ++G+   +EHYACMVDLLGR+G +
Sbjct: 643 SVGVLPNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGRTGDV 702

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
             A +FI  MP+  D ++W   LGAC++H + E+G+ AAE +   +P +   +++LSN+Y
Sbjct: 703 QGAEKFIYDMPIEPDTVIWSALLGACKIHKNAEIGRRAAEKLFTTEPSNAGNYVMLSNIY 762

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           +S G W  VA +RK MK+R + KE GCSW++  NKVH F  G+  H K  EI   L  L 
Sbjct: 763 SSLGMWVEVAELRKIMKQRGVSKEPGCSWMQIRNKVHSFVTGDKQHEKIEEIDYTLQDLY 822

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
             ++  GY+PDT FVLH+++EEQK   L  HSEK+AVA+GL+ T K  PI++ KNLR+CG
Sbjct: 823 TLLRGTGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYGLLVTPKGMPIQIMKNLRICG 882

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           DCHT IK++S VT R+I +RD NRFHH ++G CSC D+W
Sbjct: 883 DCHTFIKFVSHVTKRDIDIRDGNRFHHFRNGSCSCGDFW 921



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 165/622 (26%), Positives = 286/622 (45%), Gaps = 90/622 (14%)

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF----------VEMLE 173
           ++ G L EA ++F +M + RDI++W+SMIS+Y N G   DA  +F            +L 
Sbjct: 44  ARLGRLREAREVFDAMPH-RDIIAWNSMISAYCNSGMLEDARILFDAISGGNVRTATILL 102

Query: 174 LGFCPNEYCFSA--VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM------ 225
            G+        A  V         VA     +  ++ C   + D+ +   L D       
Sbjct: 103 SGYARLGRVLDARRVFDGMPERNTVA-----WNAMVSCYVQNGDITMARRLFDAMPSRDV 157

Query: 226 -----FVKG---SVDLESAYKVFDKMTEKNTVGWTLMIT---RCTQLGCPRDAIRLFLDM 274
                 V G   S  +  A+ +F +M ++N V WT+MI+   R  Q G   D  R+   M
Sbjct: 158 TSWNSMVTGYCHSRQMVDAWNLFKQMPQRNLVTWTVMISGYVRIEQHGKGWDIFRM---M 214

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
              G  PD+   + V+SA + L+     + L    ++TG   DV +G S++++Y +    
Sbjct: 215 HHEGASPDQSNFASVLSAVTGLQDLGVLEVLRPLVLKTGFESDVVIGTSILNVYTRDA-- 272

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS-DMIQGQVAPNHFTFAS 393
            ++D + K FD M++ N  +W+ +I   +  GGR   A+ ++  D ++    P+     +
Sbjct: 273 SALDIAIKFFDGMVERNEYTWSTMIAA-LSHGGRIDAAIAVYGRDPVKS--IPSQTALLT 329

Query: 394 VLKACGNLLDSNVA-EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
            L  CG + ++ +  EQ+    V           N++I+ Y ++G +++A++ F+ +  +
Sbjct: 330 GLARCGRITEARILFEQIPDPIV--------VSWNAMITGYMQNGMVDEAKELFDRMPFR 381

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           N +S+  M+  YA+N  SE+A +LL  +   G+  S  +  S     S IGA+  G Q+H
Sbjct: 382 NTISWAGMIAGYAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVH 441

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM---------------------E 551
           +  +K+G + N  + NALISMY +C N+E   QVF  M                     E
Sbjct: 442 SLAVKAGCQFNSYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLE 501

Query: 552 D----------RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           D          R+V+SWT++I+ +A+      A+E F  ML +  KPN      +LS C 
Sbjct: 502 DARHIFDNMLSRDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCG 561

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
             G    G +   ++  +HG+   +     ++ +  + G   ++ +   SM    D+  W
Sbjct: 562 GLGSAKLG-QQIHTVAIKHGMDSELIVANALMSMYFKCGC-ADSHKVFDSME-ERDIFTW 618

Query: 662 RTFLGACRVHGDTELGKHAAEM 683
            TF+  C  HG   LG+ A +M
Sbjct: 619 NTFITGCAQHG---LGREAIKM 637



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 160/344 (46%), Gaps = 48/344 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR ++A+  L  + + G  P L + +    +C        G+ VHSL  ++  + N
Sbjct: 393 YAQNGRSEEALDLLQALHRNGMLPSLSSLTSSFLACSHIGALETGRQVHSLAVKAGCQFN 452

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------ 142
           S + N+LIS+Y KC ++    ++F  M  K                              
Sbjct: 453 SYVCNALISMYGKCRNMEYVRQVFNRMRVKDTVSWNSFIAALVQNNMLEDARHIFDNMLS 512

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD+VSW+++IS+Y    +  +A+  F  ML     PN    + ++  C    +  +G  I
Sbjct: 513 RDVVSWTTIISAYAQAERGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQI 572

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +   +K G  DS++ V  AL+ M+ K G  D   ++KVFD M E++   W   IT C Q 
Sbjct: 573 HTVAIKHG-MDSELIVANALMSMYFKCGCAD---SHKVFDSMEERDIFTWNTFITGCAQH 628

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  R+AI+++  M   G LP+  T  G+++ACS   L   G     W     ++ D  + 
Sbjct: 629 GLGREAIKMYEHMESVGVLPNEVTFVGLLNACSHAGLVDEG-----WQFFKSMSRDYGL- 682

Query: 322 CSLVDMYAKCTVD-----GSVDDSRK-VFDRMLDHNVMSWTAII 359
             L++ YA C VD     G V  + K ++D  ++ + + W+A++
Sbjct: 683 TPLLEHYA-CMVDLLGRTGDVQGAEKFIYDMPIEPDTVIWSALL 725



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/202 (29%), Positives = 102/202 (50%), Gaps = 14/202 (6%)

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
           RALD    ++ I   AR GR+ +AR+ F+++  ++++++N+M+ AY  +   E A  L  
Sbjct: 29  RALDKSAHSARIRELARLGRLREAREVFDAMPHRDIIAWNSMISAYCNSGMLEDARILFD 88

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF-ESNHCIYNALISMYSRC 537
            I     G +  T   LLSG + +G +     + AR +  G  E N   +NA++S Y + 
Sbjct: 89  AIS----GGNVRTATILLSGYARLGRV-----LDARRVFDGMPERNTVAWNAMVSCYVQN 139

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            ++  A ++F  M  R+V SW SM+TG+        A  +F +M     + N +T+  ++
Sbjct: 140 GDITMARRLFDAMPSRDVTSWNSMVTGYCHSRQMVDAWNLFKQM----PQRNLVTWTVMI 195

Query: 598 SACSHAGLISEGWKHFRSMYDE 619
           S         +GW  FR M+ E
Sbjct: 196 SGYVRIEQHGKGWDIFRMMHHE 217



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 51/202 (25%), Positives = 102/202 (50%), Gaps = 4/202 (1%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R  +A+     M  +   P+    ++LL  C    +  LG+ +H++  +  ++   ++ N
Sbjct: 530 RGDEAVEFFKTMLHEHEKPNSPILTILLSVCGGLGSAKLGQQIHTVAIKHGMDSELIVAN 589

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +L+S+Y KCG   +++K+F SM  +RDI +W++ I+     G   +AI M+  M  +G  
Sbjct: 590 ALMSMYFKCG-CADSHKVFDSM-EERDIFTWNTFITGCAQHGLGREAIKMYEHMESVGVL 647

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           PNE  F  ++ ACS+   V  G   +  + +       +     ++D+  + + D++ A 
Sbjct: 648 PNEVTFVGLLNACSHAGLVDEGWQFFKSMSRDYGLTPLLEHYACMVDLLGR-TGDVQGAE 706

Query: 238 K-VFDKMTEKNTVGWTLMITRC 258
           K ++D   E +TV W+ ++  C
Sbjct: 707 KFIYDMPIEPDTVIWSALLGAC 728


>gi|449453904|ref|XP_004144696.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 285/785 (36%), Positives = 435/785 (55%), Gaps = 46/785 (5%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           +LD+  LL +     R     KL   +  R K        N +IS Y+  G+L EA K+F
Sbjct: 37  NLDSNQLLSELSKNGRVDEARKLFDQMPYRDKY-----TWNIMISAYANLGNLVEARKLF 91

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
                K  I +WSS++S Y   G +V+ +  F +M   G  P++Y   +V+RACS    +
Sbjct: 92  NETPIKNSI-TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLL 150

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G +I+ + +K    ++++ V   L+DM+ K    LE+ Y  F     KN V WT M+T
Sbjct: 151 HTGKMIHCYAIKIQ-LEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLT 209

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              Q G    AI+ F +M   G   + FT   +++AC+ +  +  G+Q+H   I +G   
Sbjct: 210 GYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGP 269

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           +V V  +LVDMYAKC   G +  +R + D M   +V+ W ++I G V  G  + EA+ LF
Sbjct: 270 NVYVQSALVDMYAKC---GDLASARMILDTMEIDDVVCWNSMIVGCVTHGYME-EALVLF 325

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M    +  + FT+ SVLK+  +  +  + E V++  +K G      V N+L+ MYA+ 
Sbjct: 326 HKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQ 385

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G +  A   F  + +K+++S+ ++V  Y  N   EKA +L  ++    V    +  A + 
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           S  + +  I  G Q+HA  IKS   S     N+LI+MY++C  +E A +VF  ME RNVI
Sbjct: 446 SACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVFDSMETRNVI 505

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SWT++I G+A++                                   GL+  G  +F SM
Sbjct: 506 SWTAIIVGYAQN-----------------------------------GLVETGQSYFESM 530

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
              +GI    +HYACM+DLLGR+G + EA   +  M +  D  +W++ L ACRVHG+ EL
Sbjct: 531 EKVYGIKPASDHYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLEL 590

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
           G+ A + +++ +P +   ++LLSN+++ AG WE  A+IR+ MK   + KE G SWIE  +
Sbjct: 591 GERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKS 650

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           +VH F   + SHP   EIY+++D++ + IKE G++PD NF L +++EE K + L  HSEK
Sbjct: 651 QVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEK 710

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +AVAFGL++ +K  PIR+FKNLRVCGDCH+A+KYIS +  R I+LRD N FHH  +GKCS
Sbjct: 711 LAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCS 770

Query: 857 CNDYW 861
           C D+W
Sbjct: 771 CGDFW 775



 Score =  234 bits (596), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 160/535 (29%), Positives = 265/535 (49%), Gaps = 14/535 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P   T   +L++C      H GK++H    + +LE N  +   L+ +YSKC  
Sbjct: 125 MWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L EA  +F S+ ++++ V W++M++ Y   G+ + AI  F EM   G   N + F +++ 
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILT 244

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC++    A G  ++G ++  G F  +V V  AL+DM+ K   DL SA  + D M   + 
Sbjct: 245 ACTSISAYAFGRQVHGCIIWSG-FGPNVYVQSALVDMYAKCG-DLASARMILDTMEIDDV 302

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  MI  C   G   +A+ LF  M       D FT   V+ + +  +    G+ +HS 
Sbjct: 303 VCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSL 362

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I+TG      V  +LVDMYAK    G++  +  VF+++LD +V+SWT+++TGYV +G  
Sbjct: 363 TIKTGFDACKTVSNALVDMYAK---QGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFH 419

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           +K A++LF DM   +V  + F  A V  AC  L       QV+ + +K          NS
Sbjct: 420 EK-ALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENS 478

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT-GVGT 487
           LI+MYA+ G +EDA + F+S+  +N++S+  ++  YA+N   E        +E   G+  
Sbjct: 479 LITMYAKCGCLEDAIRVFDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKP 538

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           ++  +A ++      G I + E +  R+     E +  I+ +L+S      N+E   +  
Sbjct: 539 ASDHYACMIDLLGRAGKINEAEHLLNRM---DVEPDATIWKSLLSACRVHGNLELGERAG 595

Query: 548 K---EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI-KPNGITYIAVLS 598
           K   ++E  N + +  +   F+  G    A  I   M   GI K  G ++I + S
Sbjct: 596 KNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGINKEPGYSWIEMKS 650



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 103/317 (32%), Positives = 173/317 (54%), Gaps = 6/317 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  +  +G   KAI     M  +G   +  T+  +L +C     +  G+ VH  +  S  
Sbjct: 208 LTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGF 267

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            PN  + ++L+ +Y+KCGDL  A  I  +M    D+V W+SMI   V  G   +A+ +F 
Sbjct: 268 GPNVYVQSALVDMYAKCGDLASARMILDTM-EIDDVVCWNSMIVGCVTHGYMEEALVLFH 326

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M       +++ + +V+++ ++ +N+ IG  ++   +K G FD+   V  AL+DM+ K 
Sbjct: 327 KMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTG-FDACKTVSNALVDMYAKQ 385

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             +L  A  VF+K+ +K+ + WT ++T     G    A++LF DM  +    D+F ++ V
Sbjct: 386 G-NLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACV 444

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
            SAC+EL +   G+Q+H+  I++     +    SL+ MYAKC   G ++D+ +VFD M  
Sbjct: 445 FSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC---GCLEDAIRVFDSMET 501

Query: 350 HNVMSWTAIITGYVQSG 366
            NV+SWTAII GY Q+G
Sbjct: 502 RNVISWTAIIVGYAQNG 518


>gi|297736155|emb|CBI24193.3| unnamed protein product [Vitis vinifera]
          Length = 1083

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/790 (36%), Positives = 460/790 (58%), Gaps = 47/790 (5%)

Query: 110  EPNSVILNSLISLYSK--CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
            E N +   SLIS Y+K   G +  A  +F  M   R+  SWS+M+S YV  G   +A+ +
Sbjct: 303  EKNVISWTSLISGYAKHGYGHMAHARYVFDEM-RHRNEASWSTMLSGYVRVGLYEEAVGL 361

Query: 168  FVEMLELGFCPNEYCFSAVIRACSNTENVAI-GHIIYGFLLKCGYFDSDVCVGCALIDMF 226
            F +M  LG  PN +  +++I ACS +  +A  G  ++GF++K G    DV VG AL+  +
Sbjct: 362  FCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGIL-GDVYVGTALVHFY 420

Query: 227  VKGSVDL-ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
              GS+ L  +A K+F++M + N V WT ++   +  G P + + ++  M   G   ++ T
Sbjct: 421  --GSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQEGVSGNQNT 478

Query: 286  LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
             + V S+C  LE    G Q+    I+ G    V V  SL+ M++  +   SV+++  VFD
Sbjct: 479  FATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFS---SVEEACYVFD 535

Query: 346  RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
             M + +++SW A+I+ Y   G   +E+++ F  M       N  T +S+L  C ++ +  
Sbjct: 536  HMNECDIISWNAMISAYAHHG-LCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLK 594

Query: 406  VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
                ++   VK G   + C+ N+L+++Y+ +GR EDA   F+++ E++L+S+N+M+  Y 
Sbjct: 595  WGRGIHGLVVKLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYV 654

Query: 466  KNLNSEKAFELLHE----------------------------------IEDTGVGTSAYT 491
            ++       ++L E                                  I + G+  +  T
Sbjct: 655  QDGKCLDGLKILAELLQMGKPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYIT 714

Query: 492  FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
              SL +  +++  + +G+Q+H  +IK GFES+  + NA + MY +C  +    ++  +  
Sbjct: 715  MVSL-AATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPI 773

Query: 552  DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            +R+ +SW  +I+ FA+HG   +A E F++ML  G KP+ +T++++LSAC+H GL+ EG  
Sbjct: 774  NRSRLSWNILISAFARHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLA 833

Query: 612  HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
            ++ SM  E G+   +EH  C++DLLGRSG L+ A  FI+ MP+  + L WR+ L ACR+H
Sbjct: 834  YYDSMTREFGVFPGIEHCVCIIDLLGRSGRLSHAEGFIKEMPVPPNDLAWRSLLAACRIH 893

Query: 672  GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            G+ EL +  AE +LE DP D +A++L SN+ A++G WE V N+RK M   N+ K+  CSW
Sbjct: 894  GNLELARKTAEHLLELDPSDDSAYVLYSNVCATSGKWEDVENLRKEMGSNNIKKQPACSW 953

Query: 732  IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
            ++  +KVH F +GE  HP+   I A+L +L    KE GY+PDT+F LH+++EEQK   L+
Sbjct: 954  VKLKDKVHSFGMGEKYHPQASRISAKLGELMKMTKEAGYVPDTSFALHDMDEEQKEYNLW 1013

Query: 792  QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
             HSE++A+AFGLI+T +S  +R+FKNLRVCGDCH+  K++S + GR+IVLRD  RFHH  
Sbjct: 1014 NHSERLALAFGLINTPESSTLRIFKNLRVCGDCHSVYKFVSGIVGRKIVLRDPYRFHHFS 1073

Query: 852  DGKCSCNDYW 861
             GKCSC DYW
Sbjct: 1074 GGKCSCGDYW 1083



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 188/704 (26%), Positives = 327/704 (46%), Gaps = 123/704 (17%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++L+  +SKCG + +A+ +F +M  +RD+VSW++MI  Y  +G   D+  MF  ML  G 
Sbjct: 131 HALVDFHSKCGKMEDASYLFGTM-MERDVVSWNAMIGGYAVQGFADDSFCMFRSMLRGGL 189

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC---------------- 220
            P+ Y   +V+RA +    + I + I+G + + GY   D+  G                 
Sbjct: 190 VPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIVTGLLINAYAKNGSLRSAKD 249

Query: 221 ------------------------------ALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
                                         ALIDM+ K S ++E A + FD+M EKN + 
Sbjct: 250 LRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAK-SGEIEDAKRAFDEMEEKNVIS 308

Query: 251 WT---------------------------------LMITRCTQLGCPRDAIRLFLDMILS 277
           WT                                  M++   ++G   +A+ LF  M   
Sbjct: 309 WTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYVRVGLYEEAVGLFCQMWGL 368

Query: 278 GFLPDRFTLSGVVSACSELELFT-SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           G  P+ F ++ +++ACS        G Q+H + ++TG+  DV VG +LV  Y      G 
Sbjct: 369 GVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDVYVGTALVHFYGSI---GL 425

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           V +++K+F+ M DHNV+SWT+++ GY  S G   E + ++  M Q  V+ N  TFA+V  
Sbjct: 426 VYNAQKLFEEMPDHNVVSWTSLMVGYSDS-GNPGEVLNVYQRMRQEGVSGNQNTFATVTS 484

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           +CG L D  +  QV  H ++ G      V NSLISM++    +E+A   F+ + E +++S
Sbjct: 485 SCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSVEEACYVFDHMNECDIIS 544

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +N M+ AYA +    ++    H +      T++ T +SLLS  SS+  +  G  IH  ++
Sbjct: 545 WNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLSVCSSVDNLKWGRGIHGLVV 604

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K G +SN CI N L+++YS     E A  VF+ M +R++ISW SM+  + + G     L+
Sbjct: 605 KLGLDSNVCICNTLLTLYSEAGRSEDAELVFQAMTERDLISWNSMMACYVQDGKCLDGLK 664

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE----------------- 619
           I  ++L  G KP+ +T+ A++   +     +E  K ++ + ++                 
Sbjct: 665 ILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKLIREKGIPANYITMVSLAATAN 723

Query: 620 ----------HGIVQRMEHYACM------VDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
                     HG+V ++   + +      +D+ G+ G + + L+ +   P++   L W  
Sbjct: 724 LAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKML-PQPINRSRLSWNI 782

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            + A   HG  +  +     +L+  P+    H+   +L ++  H
Sbjct: 783 LISAFARHGCFQKARETFHEMLKLGPKPD--HVTFVSLLSACNH 824



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 138/570 (24%), Positives = 245/570 (42%), Gaps = 132/570 (23%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++ C + +    GH+I+  L+  G F SD+ +   LI  +VK   D+ +A  VFD M E
Sbjct: 36  ILQLCIDKKAKKQGHLIHTHLITNG-FGSDLHLNTKLIIFYVKVG-DVIAARNVFDGMPE 93

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++ V WT M++  +Q G    A  LF DM   G   +                       
Sbjct: 94  RSVVSWTAMVSGYSQNGRFEKAFVLFSDMRHCGVKANH---------------------- 131

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
                            +LVD ++KC   G ++D+  +F  M++ +V+SW A+I GY   
Sbjct: 132 -----------------ALVDFHSKC---GKMEDASYLFGTMMERDVVSWNAMIGGYAVQ 171

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHA-------- 414
           G  D ++  +F  M++G + P+ +T  SVL+A    G L+ +N    + T          
Sbjct: 172 GFAD-DSFCMFRSMLRGGLVPDCYTLGSVLRASAEGGGLIIANQIHGIITQLGYGSYDIV 230

Query: 415 -------------------VKRGRALDD-----------------CVGNSLISMYARSGR 438
                              +++G    D                  +GN+LI MYA+SG 
Sbjct: 231 TGLLINAYAKNGSLRSAKDLRKGMLKKDLFSSTALITGYAHEGIYTMGNALIDMYAKSGE 290

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNS---------------------------- 470
           +EDA++AF+ + EKN++S+ +++  YAK+                               
Sbjct: 291 IEDAKRAFDEMEEKNVISWTSLISGYAKHGYGHMAHARYVFDEMRHRNEASWSTMLSGYV 350

Query: 471 -----EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG-KGEQIHARIIKSGFESNH 524
                E+A  L  ++   GV  + +  ASL++  S  G +  +G Q+H  ++K+G   + 
Sbjct: 351 RVGLYEEAVGLFCQMWGLGVEPNGFMVASLITACSRSGYMADEGFQVHGFVVKTGILGDV 410

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            +  AL+  Y     V  A ++F+EM D NV+SWTS++ G++  G     L ++ +M  +
Sbjct: 411 YVGTALVHFYGSIGLVYNAQKLFEEMPDHNVVSWTSLMVGYSDSGNPGEVLNVYQRMRQE 470

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD--EHGIVQRMEHYACMVDLLGRSGSL 642
           G+  N  T+  V S+C   GL+ +    ++ +    ++G    +     ++ +     S+
Sbjct: 471 GVSGNQNTFATVTSSC---GLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSSV 527

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            EA      M    D++ W   + A   HG
Sbjct: 528 EEACYVFDHMN-ECDIISWNAMISAYAHHG 556



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 113/415 (27%), Positives = 199/415 (47%), Gaps = 53/415 (12%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M Q+G   + +T++ +  SC    +  LG  V   + +   E +  + NSLIS++S    
Sbjct: 467 MRQEGVSGNQNTFATVTSSCGLLEDQVLGYQVLGHIIQYGFEDSVSVANSLISMFSSFSS 526

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EA  +F  M N+ DI+SW++MIS+Y + G   +++  F  M  L    N    S+++ 
Sbjct: 527 VEEACYVFDHM-NECDIISWNAMISAYAHHGLCRESLRCFHWMRHLHNETNSTTLSSLLS 585

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            CS+ +N+  G  I+G ++K G  DS+VC+   L+ ++ +     E A  VF  MTE++ 
Sbjct: 586 VCSSVDNLKWGRGIHGLVVKLG-LDSNVCICNTLLTLYSEAGRS-EDAELVFQAMTERDL 643

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV------------------ 290
           + W  M+    Q G   D +++  +++  G  PDR T + ++                  
Sbjct: 644 ISWNSMMACYVQDGKCLDGLKILAELLQMG-KPDRVTWNALIGGHAENEEPNEAVKAYKL 702

Query: 291 ----------------SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
                           +A + L +   G+QLH   I+ G   D+ V  + +DMY KC   
Sbjct: 703 IREKGIPANYITMVSLAATANLAVLEEGQQLHGLVIKLGFESDLHVTNAAMDMYGKC--- 759

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G + D  K+  + ++ + +SW  +I+ + + G   K A + F +M++    P+H TF S+
Sbjct: 760 GEMHDVLKMLPQPINRSRLSWNILISAFARHGCFQK-ARETFHEMLKLGPKPDHVTFVSL 818

Query: 395 LKAC--GNLLDSNVAEQVYTHAVKRG----RALDDCVGNSLISMYARSGRMEDAR 443
           L AC  G L+D  +A   Y  ++ R       ++ CV   +I +  RSGR+  A 
Sbjct: 819 LSACNHGGLVDEGLA---YYDSMTREFGVFPGIEHCV--CIIDLLGRSGRLSHAE 868



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 44/165 (26%), Positives = 80/165 (48%), Gaps = 7/165 (4%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ +H L+ +   E +  + N+ + +Y KCG++++  K+     N R  +SW+ +IS++ 
Sbjct: 730 GQQLHGLVIKLGFESDLHVTNAAMDMYGKCGEMHDVLKMLPQPIN-RSRLSWNILISAFA 788

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDS- 214
             G    A   F EML+LG  P+   F +++ AC++   V  G   Y  + +  G F   
Sbjct: 789 RHGCFQKARETFHEMLKLGPKPDHVTFVSLLSACNHGGLVDEGLAYYDSMTREFGVFPGI 848

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           + CV   +ID+  + S  L  A     +M    N + W  ++  C
Sbjct: 849 EHCV--CIIDLLGR-SGRLSHAEGFIKEMPVPPNDLAWRSLLAAC 890


>gi|297807711|ref|XP_002871739.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317576|gb|EFH47998.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 850

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 298/817 (36%), Positives = 454/817 (55%), Gaps = 64/817 (7%)

Query: 98  KLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSY 155
           KL+H  LL+   L  N  + + LIS Y   G L+ A  + +    +   +  W+S+I SY
Sbjct: 45  KLIHQKLLSFGILTLN--LTSHLISTYISLGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY 102

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
            N G+    +  F  M  L + P+ Y F  V +AC    +V  G   +      G F S+
Sbjct: 103 GNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRCGDSSHALSRVTG-FMSN 161

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V VG AL+ M+ + GS  L  A KVFD+M   + V W  +I    +LG P+ A+ +F  M
Sbjct: 162 VFVGNALVAMYSRCGS--LSDARKVFDEMPVWDVVSWNSIIESYAKLGKPKMALEMFSKM 219

Query: 275 ILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
               GF PD  TL  V+  C+ +   + GKQ H +A+ + +  ++ VG  LVDMYAK   
Sbjct: 220 TNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQNMFVGNCLVDMYAKF-- 277

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-------------- 379
            G +D++  VF  M   +V+SW A++ GY Q G R ++AV+LF  M              
Sbjct: 278 -GMMDEANTVFSNMPVKDVVSWNAMVAGYSQIG-RFEDAVRLFEQMQEEKIKMDVVTWSA 335

Query: 380 ---------------------IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-- 416
                                +   + PN  T  SVL  C ++      ++++ +A+K  
Sbjct: 336 AISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYP 395

Query: 417 -----RGRALDDCVGNSLISMYARSGRMEDARKAFESLF--EKNLVSYNTMVDAYAKNLN 469
                 G   ++ V N LI MYA+  +++ AR  F+SL   E+++V++  M+  Y+++ +
Sbjct: 396 MDLRKNGHGDENMVINQLIDMYAKCKKVDIARAMFDSLSPKERDVVTWTVMIGGYSQHGD 455

Query: 470 SEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-- 525
           + KA ELL E+  ED     +A+T +  L   +S+ A+  G+QIHA  +++  + N    
Sbjct: 456 ANKALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQIHAYALRN--QQNAVPL 513

Query: 526 -IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + N LI MY++C ++  A  VF  M ++N ++WTS++TG+  HG+   AL IF +M   
Sbjct: 514 FVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHGYGEEALGIFEEMRRI 573

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
           G K +G+T + VL ACSH+G+I +G ++F  M  + G+    EHYAC+VDLLGR+G L  
Sbjct: 574 GFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHYACLVDLLGRAGRLNA 633

Query: 645 ALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYAS 704
           AL  I  MP+    +VW   L  CR+HG  ELG++AA+ I E    +  ++ LLSN+YA+
Sbjct: 634 ALRLIEEMPMEPPPVVWVALLSCCRIHGKVELGEYAAKKITELASNNDGSYTLLSNMYAN 693

Query: 705 AGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALK 764
           AG W+ V  IR  M+ + + K  GCSW+E       F VG+ +HP   EIY  L     +
Sbjct: 694 AGRWKDVTRIRSLMRHKGIKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLSDHMQR 753

Query: 765 IKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDC 824
           IK+ GY+P+T F LH++++E+K   LF+HSEK+A+A+G+++T +   IR+ KNLRVCGDC
Sbjct: 754 IKDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDC 813

Query: 825 HTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           HTA  Y+S +   EI+LRDS+RFHH K+G CSC  YW
Sbjct: 814 HTAFTYMSRIIDHEIILRDSSRFHHFKNGLCSCKGYW 850



 Score =  232 bits (591), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 179/642 (27%), Positives = 301/642 (46%), Gaps = 73/642 (11%)

Query: 45  PLSNRLIYHLN--------DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           P S+  +YH N        +GR  K + +  LM      PD  T+  + K+C    +   
Sbjct: 86  PPSDAGVYHWNSLIRSYGNNGRANKCLSSFCLMHSLSWTPDNYTFPFVFKACGEISSVRC 145

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G   H+L   +    N  + N+L+++YS+CG L++A K+F  M    D+VSW+S+I SY 
Sbjct: 146 GDSSHALSRVTGFMSNVFVGNALVAMYSRCGSLSDARKVFDEM-PVWDVVSWNSIIESYA 204

Query: 157 NRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
             GK   A+ MF +M  E GF P++     V+  C++    ++G   +GF +       +
Sbjct: 205 KLGKPKMALEMFSKMTNEFGFRPDDITLVNVLPPCASVGTRSLGKQFHGFAVTSEMIQ-N 263

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF---- 271
           + VG  L+DM+ K  + ++ A  VF  M  K+ V W  M+   +Q+G   DA+RLF    
Sbjct: 264 MFVGNCLVDMYAKFGM-MDEANTVFSNMPVKDVVSWNAMVAGYSQIGRFEDAVRLFEQMQ 322

Query: 272 -------------------------------LDMILSGFLPDRFTLSGVVSACSELELFT 300
                                            M+ SG  P+  TL  V+S C+ +    
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382

Query: 301 SGKQLHSWAIRTGLAL-------DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LDHN 351
            GK++H +AI+  + L       +  V   L+DMYAKC     VD +R +FD +   + +
Sbjct: 383 HGKEIHCYAIKYPMDLRKNGHGDENMVINQLIDMYAKCK---KVDIARAMFDSLSPKERD 439

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQ 409
           V++WT +I GY Q G  +K A++L S+M +   Q  PN FT +  L AC +L   ++ +Q
Sbjct: 440 VVTWTVMIGGYSQHGDANK-ALELLSEMFEEDCQTRPNAFTISCALVACASLAALSIGKQ 498

Query: 410 VYTHAVK-RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           ++ +A++ +  A+   V N LI MYA+ G + DAR  F+++ EKN V++ +++  Y  + 
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGDIGDARLVFDNMMEKNEVTWTSLMTGYGMHG 558

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIY 527
             E+A  +  E+   G      T   +L   S  G I +G +   R+    G       Y
Sbjct: 559 YGEEALGIFEEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTDFGVSPGPEHY 618

Query: 528 NALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             L+ +  R   + AA ++ +EM  +   + W ++++    HG      E   K + +  
Sbjct: 619 ACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVALLSCCRIHGKVELG-EYAAKKITELA 677

Query: 587 KPNGITYIAVLSACSHAGLISEGWK---HFRSMYDEHGIVQR 625
             N  +Y  + +  ++AG     WK     RS+    GI +R
Sbjct: 678 SNNDGSYTLLSNMYANAGR----WKDVTRIRSLMRHKGIKKR 715


>gi|297720883|ref|NP_001172804.1| Os02g0151000 [Oryza sativa Japonica Group]
 gi|51535971|dbj|BAD38052.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|218190072|gb|EEC72499.1| hypothetical protein OsI_05871 [Oryza sativa Indica Group]
 gi|255670608|dbj|BAH91533.1| Os02g0151000 [Oryza sativa Japonica Group]
          Length = 922

 Score =  519 bits (1336), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/822 (34%), Positives = 462/822 (56%), Gaps = 91/822 (11%)

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           LE N+V  N++IS Y + GD+  A ++F +M + RD+ SW+SM++ Y +  + VDA ++F
Sbjct: 123 LERNTVAWNAMISCYVQNGDITMARRLFDAMPS-RDVSSWNSMLTGYCHSLQMVDARNLF 181

Query: 169 VEMLEL-------------------------------GFCPNEYCFSAVIRACSNTENVA 197
            +M E                                G  P++  F++ + A     N+ 
Sbjct: 182 EKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLD 241

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +   +    LK G F+ DV +G A+++++ + +  L++A K F+ M E+N   W+ MI  
Sbjct: 242 VLESLRVLALKTG-FERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAA 300

Query: 258 CTQLGCPRDAIRLF-LDMILSGFLPDRFTLSGVVSACSELE----LFTSGKQ--LHSWAI 310
            +  G    AI ++  D + S  +  R  L   ++ C  ++    LF    +  + SW  
Sbjct: 301 LSHGGRIDAAIAVYERDPVKS--IACRTALITGLAQCGRIDDARILFEQIPEPIVVSWN- 357

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
                       +L+  Y +   +G V++++++FD+M   N +SW  +I GY Q+G R +
Sbjct: 358 ------------ALITGYMQ---NGMVNEAKELFDKMPFRNTISWAGMIAGYAQNG-RSE 401

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+ L  ++ +  + P+  +  S+  AC N++      QV++ AVK G   +    N+LI
Sbjct: 402 EALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALI 461

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL---NSEKAFELLHEIEDTGVGT 487
           +MY +   ME AR+ F  +  K++VS+N+ + A  +N     +   F+ +   +D    T
Sbjct: 462 TMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTT 521

Query: 488 --SAYTFAS--------------------------LLSGASSIGAIGKGEQIHARIIKSG 519
             SAY  A                           LL    S+GA   G+QIH   IK G
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLG 581

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
            +S   + NALISMY +C   ++  ++F  ME+R++ +W ++ITG+A+HG    A++++ 
Sbjct: 582 MDSELIVANALISMYFKCGCADSR-RIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            M + G+ PN +T++ +L+ACSHAGL+ EGWK F+SM  ++G+    EHYACMVDLLGR+
Sbjct: 641 HMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G +  A +FI  MP+  D ++W   LGAC++H + E+GK AAE +   +P +   +++LS
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLS 760

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y+S G W  VA +RK MK++ +IKE GCSW +  +K+H F  G+  H +  EI A L+
Sbjct: 761 NIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L   +K  GY+PDT FVLH+++EEQK   L  HSEK+AVA+ L++T K  PI++ KNLR
Sbjct: 821 ELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLR 880

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCHT IK++S VT R+I +RD NRFHH ++G CSC D+W
Sbjct: 881 ICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 258/540 (47%), Gaps = 43/540 (7%)

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           + G + EA ++F +M  +RDI++W+SMIS+Y + G    A  ++  +            S
Sbjct: 46  RLGRVGEAREVFDAM-PRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 185 AVIRACSNTENVAI-------GHIIYGFLLKCGYFDSDVCVGCALIDMF----------- 226
              R     E   +         + +  ++ C   + D+ +   L D             
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164

Query: 227 VKG---SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           + G   S+ +  A  +F+KM E+N V WT+MI+   ++     A  +F  M   G LPD+
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
              +  +SA   L      + L   A++TG   DV +G +++++Y++ T    +D + K 
Sbjct: 225 SNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT--SVLDTAIKF 282

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F+ M++ N  +W+ +I   +  GGR   A+ ++       +A       + L  CG + D
Sbjct: 283 FESMIERNEYTWSTMIAA-LSHGGRIDAAIAVYERDPVKSIACRT-ALITGLAQCGRIDD 340

Query: 404 SNVA-EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
           + +  EQ+    V           N+LI+ Y ++G + +A++ F+ +  +N +S+  M+ 
Sbjct: 341 ARILFEQIPEPIV--------VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            YA+N  SE+A  LL E+  +G+  S  +  S+    S+I A+  G Q+H+  +K G + 
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQF 452

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           N    NALI+MY +C N+E A QVF  M  ++++SW S +    ++     A   F  ML
Sbjct: 453 NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML 512

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           +     + +++  ++SA +HA   +E    F++M+ EH     + +   +  LLG  GSL
Sbjct: 513 S----RDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSL 564



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 57/389 (14%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR ++A+  L  + + G  P L + + +  +C        G  VHSL  +   + N
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFN 453

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------ 142
           S   N+LI++Y KC ++  A ++F  M  K                              
Sbjct: 454 SFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD VSW+++IS+Y +  +  +A+  F  M      PN    + ++  C +     IG  I
Sbjct: 514 RDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQI 573

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +   +K G  DS++ V  ALI M+ K G  D   + ++FD M E++   W  +IT   Q 
Sbjct: 574 HTVAIKLG-MDSELIVANALISMYFKCGCAD---SRRIFDLMEERDIFTWNTIITGYAQH 629

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  R+AI+++  M  +G LP+  T  G+++ACS   L   G     W     ++ D   G
Sbjct: 630 GLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEG-----WKFFKSMSQD--YG 682

Query: 322 CSLVDMYAKCTVD-----GSVDDSRK-VFDRMLDHNVMSWTAI-----ITGYVQSGGRDK 370
            + +  +  C VD     G V  + + ++D  ++ + + W+A+     I    + G R  
Sbjct: 683 LTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAA 742

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           E  KLF   I+   A N+   +++  + G
Sbjct: 743 E--KLFR--IEPSNAGNYVMLSNIYSSLG 767



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 43/369 (11%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G V ++R+VFD M   ++++W ++I+ Y  +G  D  A +   D I G    N  T A +
Sbjct: 48  GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD--AARDLYDAISG---GNMRTGAIL 102

Query: 395 LKACGNLLDSNVAEQVYTHAVKR--------------------GRALDDCV-------GN 427
           L   G L     A +V+   ++R                     R L D +        N
Sbjct: 103 LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWN 162

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           S+++ Y  S +M DAR  FE + E+NLVS+  M+  Y +  N  KA+++  ++   G+  
Sbjct: 163 SMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLP 222

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV-EAAFQV 546
               FAS LS    +G +   E +    +K+GFE +  I  A++++YSR  +V + A + 
Sbjct: 223 DQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKF 282

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F+ M +RN  +W++MI   +  G    A+ ++ +   D +K       A+++  +  G I
Sbjct: 283 FESMIERNEYTWSTMIAALSHGGRIDAAIAVYER---DPVKSIACR-TALITGLAQCGRI 338

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            +    F  +  E  +V     +  ++    ++G + EA E    MP   + + W   + 
Sbjct: 339 DDARILFEQI-PEPIVVS----WNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIA 392

Query: 667 ACRVHGDTE 675
               +G +E
Sbjct: 393 GYAQNGRSE 401



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 46/288 (15%)

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            R GR+ +AR+ F+++  ++++++N+M+ AY  N   + A +L   I     G +  T A
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS----GGNMRTGA 100

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ-------- 545
            LLSG   +G + +      R+     E N   +NA+IS Y +  ++  A +        
Sbjct: 101 ILLSGYGRLGRVLEAR----RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR 156

Query: 546 -----------------------VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
                                  +F++M +RN++SWT MI+G+ +     +A +IF KM 
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS- 641
            +G+ P+   + + LSA    G + +  +  R +  + G  + +     ++++  R  S 
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNL-DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
           L  A++F  SM +  +   W T + A    G  +    AA  + E+DP
Sbjct: 276 LDTAIKFFESM-IERNEYTWSTMIAALSHGGRID----AAIAVYERDP 318



 Score = 47.4 bits (111), Expect = 0.037,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           +A I    R   V  A +VF  M  R++I+W SMI+ +  +G    A +++  +    ++
Sbjct: 38  SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
              I    +LS     G + E  + F  M + + +      +  M+    ++G +T A  
Sbjct: 98  TGAI----LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARR 148

Query: 648 FIRSMPLSADVLVWRTFL-GAC 668
              +MP S DV  W + L G C
Sbjct: 149 LFDAMP-SRDVSSWNSMLTGYC 169



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 10/106 (9%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP----NSVILNSLISLYSKCGDLNE 131
           PD   +S LL +C   +N  +GK     L R  +EP    N V+L+++ S     G++ E
Sbjct: 717 PDTVIWSALLGACKIHKNAEIGKRAAEKLFR--IEPSNAGNYVMLSNIYSSLGMWGEVAE 774

Query: 132 ANKIFKSMGN-KRDIVSWSSM---ISSYVNRGKQVDAIHMFVEMLE 173
             KI K  G  K    SW+ +   + S+V   KQ + I   V  LE
Sbjct: 775 VRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820


>gi|125544467|gb|EAY90606.1| hypothetical protein OsI_12205 [Oryza sativa Indica Group]
          Length = 818

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/790 (35%), Positives = 457/790 (57%), Gaps = 30/790 (3%)

Query: 76  PDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKL--EPNSVILNSLISLYSKCGDLNE 131
           P +D+++    L+ CI   +   G+ VH  + R       +    N L+++Y K G L  
Sbjct: 55  PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLDLFCANVLLNMYGKLGPLAS 114

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A ++F  M  +R++VS+ +++ ++  RG    A  +F  +   G   N++  + +++   
Sbjct: 115 ARRLFDRM-PERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAI 173

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
             +   +   ++    K G+ D +  VG  LID +   S+ +  A  VF+ +  K+ V W
Sbjct: 174 AMDAAGLAGGVHSCAWKLGH-DHNAFVGSGLIDAYSLCSL-VSDAEHVFNGIVRKDAVVW 231

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
           T M++  ++  CP +A R                      +CS L +  + + +H  AI+
Sbjct: 232 TAMVSCYSENDCPENAFR-------------------CAQSCSLLAISCARQGIHGCAIK 272

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           T    +  VG +L+DMYAKC   G + D+R  F+ +   +V+  + +I+ Y QS  ++++
Sbjct: 273 TLNDTEPHVGGALLDMYAKC---GDIKDARLAFEMIPYDDVILLSFMISRYAQSN-QNEQ 328

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A +LF  +++  V PN ++ +SVL+AC N++  +  +Q++ HA+K G   D  VGN+L+ 
Sbjct: 329 AFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMD 388

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
            YA+   M+ + K F SL + N VS+NT+V  ++++   E+A  +  E++   +  +  T
Sbjct: 389 FYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQVT 448

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           ++S+L   +S  +I    QIH  I KS F ++  I N+LI  Y++C  +  A +VF+ + 
Sbjct: 449 YSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLM 508

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           +R++ISW ++I+G+A HG AA ALE+F +M    ++ N IT++A+LS C   GL++ G  
Sbjct: 509 ERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLS 568

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
            F SM  +HGI   MEHY C+V LLGR+G L +AL+FI  +P +   +VWR  L +C +H
Sbjct: 569 LFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIH 628

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            +  LG+ +AE ILE +PQD   ++LLSN+YA+AG  + VA +RK M+   + K  G SW
Sbjct: 629 KNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGLSW 688

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           +E   ++H F VG   HP    I A L+ L LK    GY+PD N VLH++++EQK + L+
Sbjct: 689 VEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRMLW 748

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSE++A+A+GL+ T    PIR+ KNLR C DCHTA   IS +  REI++RD NRFHH +
Sbjct: 749 VHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIVRDINRFHHFE 808

Query: 852 DGKCSCNDYW 861
           DGKCSC DYW
Sbjct: 809 DGKCSCGDYW 818



 Score =  196 bits (497), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 151/548 (27%), Positives = 258/548 (47%), Gaps = 30/548 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  + A      +  +G+  +    + +LK  I      L   VHS   +   + N
Sbjct: 137 HAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHN 196

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + + + LI  YS C  +++A  +F  +  ++D V W++M+S Y                 
Sbjct: 197 AFVGSGLIDAYSLCSLVSDAEHVFNGI-VRKDAVVWTAMVSCYSEND------------- 242

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
               CP E  F    ++CS          I+G  +K    D++  VG AL+DM+ K   D
Sbjct: 243 ----CP-ENAFRCA-QSCSLLAISCARQGIHGCAIKT-LNDTEPHVGGALLDMYAKCG-D 294

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A   F+ +   + +  + MI+R  Q      A  LFL ++ S  LP+ ++LS V+ A
Sbjct: 295 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 354

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ +     GKQ+H+ AI+ G   D+ VG +L+D YAKC     +D S K+F  + D N 
Sbjct: 355 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN---DMDSSLKIFSSLRDANE 411

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW  I+ G+ QS G  +EA+ +F +M   Q+     T++SVL+AC +      A Q++ 
Sbjct: 412 VSWNTIVVGFSQS-GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 470

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
              K     D  +GNSLI  YA+ G + DA K F+ L E++++S+N ++  YA +  +  
Sbjct: 471 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 530

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALI 531
           A EL   +  + V ++  TF +LLS   S G +  G  +   + I  G + +   Y  ++
Sbjct: 531 ALELFDRMNKSNVESNDITFVALLSVCCSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIV 590

Query: 532 SMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
            +  R   +  A Q   ++    + + W ++++    H   A       K+L   I+P  
Sbjct: 591 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE--IEPQD 648

Query: 591 ITYIAVLS 598
            T   +LS
Sbjct: 649 ETTYVLLS 656


>gi|124360536|gb|ABN08546.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 1083

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 289/791 (36%), Positives = 457/791 (57%), Gaps = 24/791 (3%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           H D D ++ L  SC+   N +  K +H+LL       N V+   LI+LY   GD++ +  
Sbjct: 20  HKDAD-FNALFNSCV---NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRS 75

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----GFCPNEYCFSAVIRAC 190
            F  + +K++I SW+S+IS+YV  GK  +A++   ++  +       P+ Y F  +++AC
Sbjct: 76  TFDYI-HKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC 134

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
            +  +   G  ++  + K G F+ DV V  +L+ ++ +  V L+ A+KVF  M  K+   
Sbjct: 135 VSLVD---GKKVHCCVFKMG-FEDDVFVAASLVHLYSRYGV-LDVAHKVFVDMPVKDVGS 189

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  MI+   Q G    A+ +   M   G   D  T++ ++  C++ +   +G  +H   +
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL 249

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           + GL  DV V  +L++MY+K    G + D++ VFD+M   +++SW +II  Y Q+     
Sbjct: 250 KHGLDSDVFVSNALINMYSKF---GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNND-PS 305

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV-GNSL 429
            A++ F  M  G + P+  T  S+      L D  ++  +    ++R     D V GN+L
Sbjct: 306 TALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNAL 365

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-LNSE--KAFELLHEIEDTGVG 486
           ++MYA+ G M  A   F+ L  K+ +S+NT+V  Y +N L SE   A+ ++ E  DT   
Sbjct: 366 VNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPN 425

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
               T+ S++   S +GA+ +G +IHA++IK+    +  +   LI +Y +C  +E A  +
Sbjct: 426 QG--TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSL 483

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F E+     + W ++I     HG    AL++F  MLA+ +K + IT++++LSACSH+GL+
Sbjct: 484 FYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLV 543

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            EG K F  M  E+GI   ++HY CMVDLLGR+G L +A E +R+MP+  D  +W   L 
Sbjct: 544 DEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLS 603

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
           AC+++G+ ELG  A++ +LE D ++   ++LLSN+YA+   WE V  +R   ++R L K 
Sbjct: 604 ACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKT 663

Query: 727 AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
            G S +   +K   F+ G  +HPK  EIY EL  L+ K+K  GY+PD +FV  ++EE++K
Sbjct: 664 PGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEK 723

Query: 787 VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
            Q L  HSE++A+AFG+IST    PIR+FKNLRVCGDCH A KYIS ++ REIV+RDSNR
Sbjct: 724 EQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNR 783

Query: 847 FHHIKDGKCSC 857
           FHH KDG CSC
Sbjct: 784 FHHFKDGICSC 794



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 240/520 (46%), Gaps = 56/520 (10%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G    A+  L+ M  +G   D  T + +L  C +S +   G L+H  + +  L+ +  
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+LI++YSK G L +A  +F  M   RD+VSW+S+I++Y        A+  F  M   
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+     ++    S   +  I   I GF+++  + D DV +G AL++M+ K    + 
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGY-MN 376

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI--LSGFLPDRFTLSGVVSA 292
            A+ VFD++  K+T+ W  ++T  TQ G   +AI  + +M+      +P++ T   ++ A
Sbjct: 377 CAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPA 435

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            S +     G ++H+  I+  L LDV V   L+D+Y KC   G ++D+  +F  +     
Sbjct: 436 YSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKC---GRLEDAMSLFYEIPRDTS 492

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           + W AII   +   GR +EA++LF DM+  +V  +H TF S+L AC              
Sbjct: 493 VPWNAIIAS-LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSAC-------------- 537

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKN 467
                                + SG +++ +K F+ +      + +L  Y  MVD   + 
Sbjct: 538 ---------------------SHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              EKA+EL   + +  +   A  + +LLS     G    G     R+++   E N   Y
Sbjct: 577 GYLEKAYEL---VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE-NVGYY 632

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNV---ISWTSMITG 564
             L ++Y+     E   +V     DR +     W+S++ G
Sbjct: 633 VLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG 672


>gi|222622177|gb|EEE56309.1| hypothetical protein OsJ_05395 [Oryza sativa Japonica Group]
          Length = 922

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 287/822 (34%), Positives = 462/822 (56%), Gaps = 91/822 (11%)

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           LE N+V  N++IS Y + GD+  A ++F +M + RD+ SW+SM++ Y +  + VDA ++F
Sbjct: 123 LERNTVAWNAMISCYVQNGDITMARRLFDAMPS-RDVSSWNSMLTGYCHSLQMVDARNLF 181

Query: 169 VEMLEL-------------------------------GFCPNEYCFSAVIRACSNTENVA 197
            +M E                                G  P++  F++ + A     N+ 
Sbjct: 182 EKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQSNFASALSAVKGLGNLD 241

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +   +    LK G F+ DV +G A+++++ + +  L++A K F+ M E+N   W+ MI  
Sbjct: 242 VLESLRVLALKTG-FERDVVIGTAILNVYSRDTSVLDTAIKFFESMIERNEYTWSTMIAA 300

Query: 258 CTQLGCPRDAIRLF-LDMILSGFLPDRFTLSGVVSACSELE----LFTSGKQ--LHSWAI 310
            +  G    AI ++  D + S  +  R  L   ++ C  ++    LF    +  + SW  
Sbjct: 301 LSHGGRIDAAIAVYERDPVKS--IACRTALITGLAQCGRIDDARILFEQIPEPIVVSWN- 357

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
                       +L+  Y +   +G V++++++FD+M   N +SW  +I GY Q+G R +
Sbjct: 358 ------------ALITGYMQ---NGMVNEAKELFDKMPFRNTISWAGMIAGYAQNG-RSE 401

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+ L  ++ +  + P+  +  S+  AC N++      QV++ AVK G   +    N+LI
Sbjct: 402 EALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFNSFACNALI 461

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL---NSEKAFELLHEIEDTGVGT 487
           +MY +   ME AR+ F  +  K++VS+N+ + A  +N     +   F+ +   +D    T
Sbjct: 462 TMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLSRDDVSWTT 521

Query: 488 --SAYTFAS--------------------------LLSGASSIGAIGKGEQIHARIIKSG 519
             SAY  A                           LL    S+GA   G+QIH   IK G
Sbjct: 522 IISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQIHTVAIKLG 581

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
            +S   + NALISMY +C   ++  ++F  ME+R++ +W ++ITG+A+HG    A++++ 
Sbjct: 582 MDSELIVANALISMYFKCGCADSR-RIFDLMEERDIFTWNTIITGYAQHGLGREAIKMYQ 640

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            M + G+ PN +T++ +L+ACSHAGL+ EGWK F+SM  ++G+    EHYACMVDLLGR+
Sbjct: 641 HMESAGVLPNEVTFVGLLNACSHAGLVDEGWKFFKSMSQDYGLTPLPEHYACMVDLLGRT 700

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G +  A +FI  MP+  D ++W   LGAC++H + E+GK AAE +   +P +   +++LS
Sbjct: 701 GDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAAEKLFRIEPSNAGNYVMLS 760

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y+S G W  VA +RK MK++ +IKE GCSW +  +K+H F  G+  H +  EI A L+
Sbjct: 761 NIYSSLGMWGEVAEVRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L   +K  GY+PDT FVLH+++EEQK   L  HSEK+AVA+ L++T K  PI++ KNLR
Sbjct: 821 ELYTLLKATGYVPDTEFVLHDIDEEQKESSLLYHSEKLAVAYCLLATPKGMPIQILKNLR 880

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCHT IK++S VT R+I +RD NRFHH ++G CSC D+W
Sbjct: 881 ICGDCHTFIKFVSHVTKRQIDIRDGNRFHHFRNGSCSCEDFW 922



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 141/540 (26%), Positives = 258/540 (47%), Gaps = 43/540 (7%)

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           + G + EA ++F +M  +RDI++W+SMIS+Y + G    A  ++  +            S
Sbjct: 46  RLGRVGEAREVFDAM-PRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMRTGAILLS 104

Query: 185 AVIRACSNTENVAI-------GHIIYGFLLKCGYFDSDVCVGCALIDMF----------- 226
              R     E   +         + +  ++ C   + D+ +   L D             
Sbjct: 105 GYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWNSM 164

Query: 227 VKG---SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           + G   S+ +  A  +F+KM E+N V WT+MI+   ++     A  +F  M   G LPD+
Sbjct: 165 LTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLPDQ 224

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
              +  +SA   L      + L   A++TG   DV +G +++++Y++ T    +D + K 
Sbjct: 225 SNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDT--SVLDTAIKF 282

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F+ M++ N  +W+ +I   +  GGR   A+ ++       +A       + L  CG + D
Sbjct: 283 FESMIERNEYTWSTMIAA-LSHGGRIDAAIAVYERDPVKSIACRT-ALITGLAQCGRIDD 340

Query: 404 SNVA-EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
           + +  EQ+    V           N+LI+ Y ++G + +A++ F+ +  +N +S+  M+ 
Sbjct: 341 ARILFEQIPEPIV--------VSWNALITGYMQNGMVNEAKELFDKMPFRNTISWAGMIA 392

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            YA+N  SE+A  LL E+  +G+  S  +  S+    S+I A+  G Q+H+  +K G + 
Sbjct: 393 GYAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQF 452

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           N    NALI+MY +C N+E A QVF  M  ++++SW S +    ++     A   F  ML
Sbjct: 453 NSFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNML 512

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           +     + +++  ++SA +HA   +E    F++M+ EH     + +   +  LLG  GSL
Sbjct: 513 S----RDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEH----ELPNSPILTILLGVCGSL 564



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 173/389 (44%), Gaps = 57/389 (14%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR ++A+  L  + + G  P L + + +  +C        G  VHSL  +   + N
Sbjct: 394 YAQNGRSEEALGLLQELHRSGMLPSLSSLTSIFFACSNIVALETGTQVHSLAVKVGCQFN 453

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------ 142
           S   N+LI++Y KC ++  A ++F  M  K                              
Sbjct: 454 SFACNALITMYGKCRNMEYARQVFSRMVTKDIVSWNSFLAALVQNDLLDEARNTFDNMLS 513

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD VSW+++IS+Y +  +  +A+  F  M      PN    + ++  C +     IG  I
Sbjct: 514 RDDVSWTTIISAYAHAEQSNEAMGAFKTMFCEHELPNSPILTILLGVCGSLGASKIGQQI 573

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +   +K G  DS++ V  ALI M+ K G  D   + ++FD M E++   W  +IT   Q 
Sbjct: 574 HTVAIKLG-MDSELIVANALISMYFKCGCAD---SRRIFDLMEERDIFTWNTIITGYAQH 629

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  R+AI+++  M  +G LP+  T  G+++ACS   L   G     W     ++ D   G
Sbjct: 630 GLGREAIKMYQHMESAGVLPNEVTFVGLLNACSHAGLVDEG-----WKFFKSMSQD--YG 682

Query: 322 CSLVDMYAKCTVD-----GSVDDSRK-VFDRMLDHNVMSWTAI-----ITGYVQSGGRDK 370
            + +  +  C VD     G V  + + ++D  ++ + + W+A+     I    + G R  
Sbjct: 683 LTPLPEHYACMVDLLGRTGDVQGAEQFIYDMPIEPDTVIWSALLGACKIHKNAEIGKRAA 742

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           E  KLF   I+   A N+   +++  + G
Sbjct: 743 E--KLFR--IEPSNAGNYVMLSNIYSSLG 767



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 93/369 (25%), Positives = 168/369 (45%), Gaps = 43/369 (11%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G V ++R+VFD M   ++++W ++I+ Y  +G  D  A +   D I G    N  T A +
Sbjct: 48  GRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPD--AARDLYDAISG---GNMRTGAIL 102

Query: 395 LKACGNLLDSNVAEQVYTHAVKR--------------------GRALDDCV-------GN 427
           L   G L     A +V+   ++R                     R L D +        N
Sbjct: 103 LSGYGRLGRVLEARRVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSRDVSSWN 162

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           S+++ Y  S +M DAR  FE + E+NLVS+  M+  Y +  N  KA+++  ++   G+  
Sbjct: 163 SMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMHREGLLP 222

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV-EAAFQV 546
               FAS LS    +G +   E +    +K+GFE +  I  A++++YSR  +V + A + 
Sbjct: 223 DQSNFASALSAVKGLGNLDVLESLRVLALKTGFERDVVIGTAILNVYSRDTSVLDTAIKF 282

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F+ M +RN  +W++MI   +  G    A+ ++ +   D +K       A+++  +  G I
Sbjct: 283 FESMIERNEYTWSTMIAALSHGGRIDAAIAVYER---DPVKSIACR-TALITGLAQCGRI 338

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            +    F  +  E  +V     +  ++    ++G + EA E    MP   + + W   + 
Sbjct: 339 DDARILFEQI-PEPIVVS----WNALITGYMQNGMVNEAKELFDKMPFR-NTISWAGMIA 392

Query: 667 ACRVHGDTE 675
               +G +E
Sbjct: 393 GYAQNGRSE 401



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 70/288 (24%), Positives = 132/288 (45%), Gaps = 46/288 (15%)

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            R GR+ +AR+ F+++  ++++++N+M+ AY  N   + A +L   I     G +  T A
Sbjct: 45  GRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAIS----GGNMRTGA 100

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ-------- 545
            LLSG   +G + +      R+     E N   +NA+IS Y +  ++  A +        
Sbjct: 101 ILLSGYGRLGRVLEAR----RVFDGMLERNTVAWNAMISCYVQNGDITMARRLFDAMPSR 156

Query: 546 -----------------------VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
                                  +F++M +RN++SWT MI+G+ +     +A +IF KM 
Sbjct: 157 DVSSWNSMLTGYCHSLQMVDARNLFEKMPERNLVSWTVMISGYGRIENHGKAWDIFCKMH 216

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS- 641
            +G+ P+   + + LSA    G + +  +  R +  + G  + +     ++++  R  S 
Sbjct: 217 REGLLPDQSNFASALSAVKGLGNL-DVLESLRVLALKTGFERDVVIGTAILNVYSRDTSV 275

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
           L  A++F  SM +  +   W T + A    G  +    AA  + E+DP
Sbjct: 276 LDTAIKFFESM-IERNEYTWSTMIAALSHGGRID----AAIAVYERDP 318



 Score = 47.4 bits (111), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 36/142 (25%), Positives = 63/142 (44%), Gaps = 11/142 (7%)

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           +A I    R   V  A +VF  M  R++I+W SMI+ +  +G    A +++  +    ++
Sbjct: 38  SARIRDLGRLGRVGEAREVFDAMPRRDIIAWNSMISAYCHNGMPDAARDLYDAISGGNMR 97

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
              I    +LS     G + E  + F  M + + +      +  M+    ++G +T A  
Sbjct: 98  TGAI----LLSGYGRLGRVLEARRVFDGMLERNTVA-----WNAMISCYVQNGDITMARR 148

Query: 648 FIRSMPLSADVLVWRTFL-GAC 668
              +MP S DV  W + L G C
Sbjct: 149 LFDAMP-SRDVSSWNSMLTGYC 169



 Score = 39.7 bits (91), Expect = 8.2,   Method: Compositional matrix adjust.
 Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 10/106 (9%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP----NSVILNSLISLYSKCGDLNE 131
           PD   +S LL +C   +N  +GK     L R  +EP    N V+L+++ S     G++ E
Sbjct: 717 PDTVIWSALLGACKIHKNAEIGKRAAEKLFR--IEPSNAGNYVMLSNIYSSLGMWGEVAE 774

Query: 132 ANKIFKSMGN-KRDIVSWSSM---ISSYVNRGKQVDAIHMFVEMLE 173
             KI K  G  K    SW+ +   + S+V   KQ + I   V  LE
Sbjct: 775 VRKIMKQQGVIKEPGCSWTQIKDKMHSFVTGDKQHEQIEEIVATLE 820


>gi|297740109|emb|CBI30291.3| unnamed protein product [Vitis vinifera]
          Length = 616

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 260/620 (41%), Positives = 386/620 (62%), Gaps = 5/620 (0%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M ++N V WT MI+  +Q     +AIR F  M + G +P +F  S  + AC+ L     G
Sbjct: 1   MPQRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMG 60

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+H  A++ G+  ++ VG +L DMY+KC   G++ D+ KVF+ M   + +SWTA+I GY
Sbjct: 61  KQMHCLALKFGIGSELFVGSNLEDMYSKC---GAMFDACKVFEEMPCKDEVSWTAMIDGY 117

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            + G   +EA+  F  MI  +V  +     S L ACG L        V++  VK G   D
Sbjct: 118 SKIG-EFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESD 176

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
             VGN+L  MY+++G ME A   F    E +N+VSY  ++D Y +    EK   +  E+ 
Sbjct: 177 IFVGNALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELR 236

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             G+  + +TF+SL+   ++  A+ +G Q+HA+++K  F+ +  + + L+ MY +C  +E
Sbjct: 237 RQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGLLE 296

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A Q F E+ D   I+W S+++ F +HG    A++IF +M+  G+KPN IT+I++L+ CS
Sbjct: 297 QAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS 356

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGL+ EG  +F SM   +G+V   EHY+C++DLLGR+G L EA EFI  MP   +   W
Sbjct: 357 HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAFGW 416

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            +FLGACR+HGD E+GK AAE +++ +P++  A +LLSN+YA+   WE V ++R RM++ 
Sbjct: 417 CSFLGACRIHGDKEMGKLAAEKLVKLEPKNSGALVLLSNIYANERQWEDVRSVRMRMRDG 476

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
           N+ K  G SW++   K H F   + SHP+   IY +LD L  +IK  GY+P T+ V  ++
Sbjct: 477 NVKKLPGYSWVDVGYKTHVFGAEDWSHPRKSAIYEKLDTLLDQIKAAGYVPRTDSVPLDM 536

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           ++  K + L +HSE+IAVAF LIS    KPI V KNLRVC DCH+AIK+IS VTGR+I++
Sbjct: 537 DDSMKEKLLHRHSERIAVAFALISMPIGKPIIVKKNLRVCVDCHSAIKFISKVTGRKIIV 596

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD++RFHH  DG CSC DYW
Sbjct: 597 RDNSRFHHFTDGSCSCGDYW 616



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 222/433 (51%), Gaps = 13/433 (3%)

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R++VSW++MIS      K  +AI  F  M   G  P ++ FS+ IRAC++  ++ +G  
Sbjct: 3   QRNLVSWTAMISGLSQNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQ 62

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++   LK G   S++ VG  L DM+ K     + A KVF++M  K+ V WT MI   +++
Sbjct: 63  MHCLALKFG-IGSELFVGSNLEDMYSKCGAMFD-ACKVFEEMPCKDEVSWTAMIDGYSKI 120

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   +A+  F  MI      D+  L   + AC  L+    G+ +HS  ++ G   D+ VG
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +L DMY+K    G ++ +  VF   +D    NV+S+T +I GYV++   +K  + +F +
Sbjct: 181 NALTDMYSKA---GDMESASNVFG--IDSECRNVVSYTCLIDGYVETEQIEK-GLSVFVE 234

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           + +  + PN FTF+S++KAC N        Q++   +K     D  V + L+ MY + G 
Sbjct: 235 LRRQGIEPNEFTFSSLIKACANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKCGL 294

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +E A +AF+ + +   +++N++V  + ++   + A ++   + D GV  +A TF SLL+G
Sbjct: 295 LEQAIQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTG 354

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
            S  G + +G      + K+ G       Y+ +I +  R   ++ A +    M  + N  
Sbjct: 355 CSHAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRMPFEPNAF 414

Query: 557 SWTSMITGFAKHG 569
            W S +     HG
Sbjct: 415 GWCSFLGACRIHG 427



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/417 (28%), Positives = 209/417 (50%), Gaps = 20/417 (4%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            + +  +AI T   M   G  P    +S  +++C    +  +GK +H L  +  +     
Sbjct: 18  QNSKFSEAIRTFCGMRICGEVPTQFAFSSAIRACASLGSIEMGKQMHCLALKFGIGSELF 77

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L  +YSKCG + +A K+F+ M  K D VSW++MI  Y   G+  +A+  F +M++ 
Sbjct: 78  VGSNLEDMYSKCGAMFDACKVFEEMPCK-DEVSWTAMIDGYSKIGEFEEALLAFKKMIDE 136

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               +++   + + AC   +    G  ++  ++K G F+SD+ VG AL DM+ K   D+E
Sbjct: 137 EVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLG-FESDIFVGNALTDMYSKAG-DME 194

Query: 235 SAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           SA  VF   +E +N V +T +I    +       + +F+++   G  P+ FT S ++ AC
Sbjct: 195 SASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGIEPNEFTFSSLIKAC 254

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +       G QLH+  ++     D  V   LVDMY KC   G ++ + + FD + D   +
Sbjct: 255 ANQAALEQGTQLHAQVMKINFDEDPFVSSILVDMYGKC---GLLEQAIQAFDEIGDPTEI 311

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVY 411
           +W ++++ + Q  G  K+A+K+F  M+   V PN  TF S+L  C    L++  + +  Y
Sbjct: 312 AWNSLVSVFGQH-GLGKDAIKIFERMVDRGVKPNAITFISLLTGCSHAGLVEEGL-DYFY 369

Query: 412 ----THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
               T+ V  G     CV    I +  R+GR+++A++    + FE N   + + + A
Sbjct: 370 SMDKTYGVVPGEEHYSCV----IDLLGRAGRLKEAKEFINRMPFEPNAFGWCSFLGA 422



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 85/334 (25%), Positives = 158/334 (47%), Gaps = 25/334 (7%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M  +    D       L +C   +    G+ VHS + +   E +  + 
Sbjct: 121 GEFEEALLAFKKMIDEEVTIDQHVLCSTLGACGALKACKFGRSVHSSVVKLGFESDIFVG 180

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L  +YSK GD+  A+ +F      R++VS++ +I  YV   +    + +FVE+   G 
Sbjct: 181 NALTDMYSKAGDMESASNVFGIDSECRNVVSYTCLIDGYVETEQIEKGLSVFVELRRQGI 240

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PNE+ FS++I+AC+N   +  G  ++  ++K   FD D  V   L+DM+ K  + LE A
Sbjct: 241 EPNEFTFSSLIKACANQAALEQGTQLHAQVMKIN-FDEDPFVSSILVDMYGKCGL-LEQA 298

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            + FD++ +   + W  +++   Q G  +DAI++F  M+  G  P+  T   +++ CS  
Sbjct: 299 IQAFDEIGDPTEIAWNSLVSVFGQHGLGKDAIKIFERMVDRGVKPNAITFISLLTGCS-- 356

Query: 297 ELFTSGKQLHSWAIRTGL----ALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM 347
                    H+  +  GL    ++D   G    + +  C +D     G + ++++  +RM
Sbjct: 357 ---------HAGLVEEGLDYFYSMDKTYGVVPGEEHYSCVIDLLGRAGRLKEAKEFINRM 407

Query: 348 -LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             + N   W + +      G  DKE  KL ++ +
Sbjct: 408 PFEPNAFGWCSFLGACRIHG--DKEMGKLAAEKL 439


>gi|357521733|ref|XP_003631155.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525177|gb|AET05631.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 785

 Score =  518 bits (1335), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 269/738 (36%), Positives = 428/738 (57%), Gaps = 12/738 (1%)

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           ++  A  +F  +  K  +V W+ MI +Y   G    +I++++ ML+LG  P  + F  ++
Sbjct: 56  EIQLARHVFDQIP-KPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLL 114

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT--E 245
           +ACS+ + + +G +I+      G    D+ V  AL+ M+ K    L  A  +F+ ++  +
Sbjct: 115 KACSSLQALQLGRLIHTHAHILG-LSMDLYVSTALLHMYAKCG-HLYQAQTLFNSISHQD 172

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++ V W  MI   +        I     M  +G  P+  TL  ++    +      GK +
Sbjct: 173 RDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAI 232

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H++ IR     +V +  +L+DMYAKC +   +  +RK+F+ +   N + W+A+I GYV  
Sbjct: 233 HAYYIRNFFFDNVVLQTALLDMYAKCHL---LFYARKIFNTVNKKNDVCWSAMIGGYVLH 289

Query: 366 GGRDKEAVKLFSDM--IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
                +A+ L+ DM  I G + P   T A++L+AC  L D    ++++ H +K G  LD 
Sbjct: 290 DSIS-DALALYDDMLCIYG-LNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDT 347

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            VGNSLISMYA+ G M++A    + +  K+ VSY+ ++    +N  +EKA  +  +++ +
Sbjct: 348 TVGNSLISMYAKCGIMDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEKALLIFRQMQSS 407

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+     T  +LL   S + A+  G   H   +  GF ++  I NA+I MYS+C  +  +
Sbjct: 408 GIAPYLETMIALLPACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITIS 467

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            ++F  M++R++ISW +MI G+  HG    AL +F ++ A G+KP+ +T IAVLSACSH+
Sbjct: 468 REIFDRMQNRDIISWNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHS 527

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL++EG   F SM     I  RM HY CMVDLL R+G+L EA  FI+ MP   +V +W  
Sbjct: 528 GLVTEGKYWFSSMSQNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGA 587

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L ACR H + E+G+  ++ I    P+     +L+SN+Y+S G W+  A IR   +    
Sbjct: 588 LLAACRTHKNIEMGEQVSKKIQLLGPEGTGNFVLMSNIYSSVGRWDDAAYIRSIQRHHGY 647

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K  GCSW+E    +H F  G  SHP++  I  +L +L +++K+ GY  D++FVLH++EE
Sbjct: 648 KKSPGCSWVEISGVIHVFIGGHQSHPQSASINKKLQELLVQMKKLGYRADSSFVLHDVEE 707

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E+K Q L  HSEK+A+AFG+++TS S  I V KNLR+C DCH+AIK+I+++T REI +RD
Sbjct: 708 EEKEQILLYHSEKVAIAFGILNTSPSSRILVTKNLRICVDCHSAIKFITLLTEREITVRD 767

Query: 844 SNRFHHIKDGKCSCNDYW 861
           ++RFHH KDG C+C D+W
Sbjct: 768 ASRFHHFKDGICNCQDFW 785



 Score =  231 bits (589), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 151/534 (28%), Positives = 276/534 (51%), Gaps = 11/534 (2%)

Query: 40  PTTSEPLSNRLI-YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
           P  S  L N +I  +   G  Q++I+    M Q G  P   T+  LLK+C   +   LG+
Sbjct: 68  PKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQLGVTPTNFTFPFLLKACSSLQALQLGR 127

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVN 157
           L+H+      L  +  +  +L+ +Y+KCG L +A  +F S+ ++ RDIV+W++MI+++  
Sbjct: 128 LIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQAQTLFNSISHQDRDIVAWNAMIAAFSF 187

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                  IH   +M + G  PN     +++        +  G  I+ + ++  +FD +V 
Sbjct: 188 HALHAQTIHSVAQMQQAGVTPNSSTLVSILPTIGQANALHQGKAIHAYYIRNFFFD-NVV 246

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-L 276
           +  AL+DM+ K  + L  A K+F+ + +KN V W+ MI          DA+ L+ DM+ +
Sbjct: 247 LQTALLDMYAKCHL-LFYARKIFNTVNKKNDVCWSAMIGGYVLHDSISDALALYDDMLCI 305

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
            G  P   TL+ ++ AC++L     GK+LH   I++G+ LD  VG SL+ MYAKC   G 
Sbjct: 306 YGLNPTPATLATMLRACAQLTDLKRGKKLHCHMIKSGMDLDTTVGNSLISMYAKC---GI 362

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +D++    D M+  + +S++AII+G VQ+G  +K A+ +F  M    +AP   T  ++L 
Sbjct: 363 MDNAVGFLDEMIAKDTVSYSAIISGCVQNGYAEK-ALLIFRQMQSSGIAPYLETMIALLP 421

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC +L         + + V RG   D  + N++I MY++ G++  +R+ F+ +  ++++S
Sbjct: 422 ACSHLAALQHGTCCHGYTVVRGFTNDTSICNAIIDMYSKCGKITISREIFDRMQNRDIIS 481

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +NTM+  Y  +    +A  L  E++  G+     T  ++LS  S  G + +G+   + + 
Sbjct: 482 WNTMIIGYGIHGLCVEALSLFQELQALGLKPDDVTLIAVLSACSHSGLVTEGKYWFSSMS 541

Query: 517 KS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           ++   +     Y  ++ + +R  N++ A+   + M    NV  W +++     H
Sbjct: 542 QNFNIKPRMAHYICMVDLLARAGNLDEAYTFIQRMPFVPNVRIWGALLAACRTH 595



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 113/251 (45%), Gaps = 4/251 (1%)

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
           D     L   +     ++ AR  F+ + + ++V +N M+  YA +   +++  L   +  
Sbjct: 41  DAAATQLARYHISRNEIQLARHVFDQIPKPSVVLWNMMIRTYAWSGPFQQSIYLYLHMLQ 100

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            GV  + +TF  LL   SS+ A+  G  IH      G   +  +  AL+ MY++C ++  
Sbjct: 101 LGVTPTNFTFPFLLKACSSLQALQLGRLIHTHAHILGLSMDLYVSTALLHMYAKCGHLYQ 160

Query: 543 AFQVFKEM--EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           A  +F  +  +DR++++W +MI  F+ H   A+ +    +M   G+ PN  T +++L   
Sbjct: 161 AQTLFNSISHQDRDIVAWNAMIAAFSFHALHAQTIHSVAQMQQAGVTPNSSTLVSILPTI 220

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
             A  + +G K   + Y  +     +     ++D+  +   L  A +   ++    DV  
Sbjct: 221 GQANALHQG-KAIHAYYIRNFFFDNVVLQTALLDMYAKCHLLFYARKIFNTVNKKNDV-C 278

Query: 661 WRTFLGACRVH 671
           W   +G   +H
Sbjct: 279 WSAMIGGYVLH 289


>gi|255561624|ref|XP_002521822.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223539035|gb|EEF40632.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 793

 Score =  518 bits (1334), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 283/792 (35%), Positives = 464/792 (58%), Gaps = 13/792 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D   Y+ L++   +S +   GKL H+ + ++   P   +LN+ ++LYSK G++  A K+F
Sbjct: 8   DSVAYTKLVQFSSKSGSSIHGKLAHAHMIKTAFNPCLFLLNNFLNLYSKWGEMGNAQKLF 67

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M ++R ++S++ +IS Y   G    AI +F E        +++ ++ V+ AC   ++ 
Sbjct: 68  DRM-SERSVISYNILISGYGGMGFYHKAIGLFSEARMACLKLDKFSYAGVLSACGQIKDF 126

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
           A+G +I+G  + CG     V +   LIDM+ K    ++ A  +F+   E + V W  +IT
Sbjct: 127 ALGKVIHGLAIVCG-LGQQVFLTNLLIDMYCKCE-RIDHARLLFESSDELDNVSWNSLIT 184

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC--SELELFTSGKQLHSWAIRTGL 314
              ++G   + ++L + M  +G   + FTL   + +C  +   + + GK LH + ++ GL
Sbjct: 185 GYARVGAYEEMLKLLVKMHHTGLRLNAFTLGSALKSCYLNLNNMVSYGKTLHGYTVKQGL 244

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE--- 371
            LD+ VG +L+DMYAK    G + D+ ++F    + NV+ + A+I G++Q+   DKE   
Sbjct: 245 DLDIVVGTALLDMYAKT---GYLGDAIQLFRTSPNQNVVMYNAMIAGFIQTEDIDKECAY 301

Query: 372 -AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
            A+KLFS M +  + P+ FTF+S++K C ++      +Q++ H  K     D+ +G++LI
Sbjct: 302 EALKLFSQMQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLI 361

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            +Y+  G  ED  K F S  + ++VS+ TM+  YA+N   E A  L +E+  +G     +
Sbjct: 362 ELYSLLGSTEDQLKCFNSTPKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEF 421

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
              ++LS  + + A   GEQ+H   +K+G  +   + N+ ISMY++  N+++A   F+E+
Sbjct: 422 IITTMLSACADVAAERSGEQVHGYAVKTGIGTLAIVQNSQISMYAKSGNLDSAKITFEEI 481

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           ++ +V+SW+ MI   A+HG A  A+ +F  M + GI PN IT++ VL+ACSH GL+ EG 
Sbjct: 482 KNPDVVSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGL 541

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
           +++ SM  ++ +   ++H  C+VDLL R+G L +A  FI +       ++WRT L  CR+
Sbjct: 542 RYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLDAKNFILNSGFGDHPVMWRTLLSGCRI 601

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           + D   GKH AE ++E DPQ+ ++++LL N+Y  AG       IR+ MK+R + KE G S
Sbjct: 602 YKDIVTGKHVAEKLIELDPQESSSYVLLYNIYTDAGIDLPATKIRELMKDRGIRKEPGQS 661

Query: 731 WIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD-TNFVLHELEEEQKVQY 789
           WIE  N+VH F VG+ SHP +  IY +L+ +  K ++ GY+      V    +E +    
Sbjct: 662 WIEVGNEVHSFVVGDISHPMSQIIYKKLEGMLEKKRKIGYIDQKIQNVTISTKEVKGTLG 721

Query: 790 LFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHH 849
           +  HSEK+AV+FG++S   S P++V KNLRVC DCH  +K IS+V  REI+LRDS RFHH
Sbjct: 722 VNHHSEKLAVSFGIVSLPPSAPVKVMKNLRVCHDCHATMKLISVVEKREIILRDSLRFHH 781

Query: 850 IKDGKCSCNDYW 861
            K+G CSCNDYW
Sbjct: 782 FKEGSCSCNDYW 793



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 158/318 (49%), Gaps = 21/318 (6%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  P   T+S ++K C     F  GK +H+ + +  ++ +  I ++LI LYS  G 
Sbjct: 310 MQRQGIKPSDFTFSSIIKICNHIEAFEYGKQIHAHICKHNIQSDEFIGSTLIELYSLLGS 369

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
             +  K F S   K DIVSW++MI+ Y   G+   A+ +F E+L  G  P+E+  + ++ 
Sbjct: 370 TEDQLKCFNST-PKLDIVSWTTMIAGYAQNGQFESALALFYELLASGKKPDEFIITTMLS 428

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC++      G  ++G+ +K G   +   V  + I M+ K S +L+SA   F+++   + 
Sbjct: 429 ACADVAAERSGEQVHGYAVKTG-IGTLAIVQNSQISMYAK-SGNLDSAKITFEEIKNPDV 486

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHS 307
           V W++MI    Q G  +DAI LF  M   G  P++ T  GV++ACS   L   G +   S
Sbjct: 487 VSWSVMICSNAQHGHAKDAINLFELMKSYGIHPNQITFLGVLTACSHGGLVEEGLRYYES 546

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF--DRMLDHNVMSWTAIITGYVQS 365
                 + ++V     +VD+ ++    G + D++         DH VM W  +++G    
Sbjct: 547 MKKDYDMKINVKHCTCIVDLLSRA---GRLLDAKNFILNSGFGDHPVM-WRTLLSG---- 598

Query: 366 GGRDKEAVKLFSDMIQGQ 383
                   +++ D++ G+
Sbjct: 599 -------CRIYKDIVTGK 609



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/204 (25%), Positives = 94/204 (46%), Gaps = 1/204 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+ + A+     +   G  PD    + +L +C        G+ VH    ++ +   ++
Sbjct: 397 QNGQFESALALFYELLASGKKPDEFIITTMLSACADVAAERSGEQVHGYAVKTGIGTLAI 456

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NS IS+Y+K G+L+ A   F+ + N  D+VSWS MI S    G   DAI++F  M   
Sbjct: 457 VQNSQISMYAKSGNLDSAKITFEEIKNP-DVVSWSVMICSNAQHGHAKDAINLFELMKSY 515

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN+  F  V+ ACS+   V  G   Y  + K      +V     ++D+  +    L+
Sbjct: 516 GIHPNQITFLGVLTACSHGGLVEEGLRYYESMKKDYDMKINVKHCTCIVDLLSRAGRLLD 575

Query: 235 SAYKVFDKMTEKNTVGWTLMITRC 258
           +   + +     + V W  +++ C
Sbjct: 576 AKNFILNSGFGDHPVMWRTLLSGC 599


>gi|359480846|ref|XP_002280702.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 785

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 272/699 (38%), Positives = 419/699 (59%), Gaps = 65/699 (9%)

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           + KG   LE A++VF++M E ++V WT MI    Q+G   +AI +F +M+     P +FT
Sbjct: 89  YAKGG-RLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFT 147

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC-------------- 331
           L+ V+++C+ +E    G+++HS+ ++ GL+  + V  SL++MYAK               
Sbjct: 148 LTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMK 207

Query: 332 --------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
                            G VD ++  F++M++ +V+SW A+I+GY Q G  D+EA+ +FS
Sbjct: 208 LKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHG-FDREALDIFS 266

Query: 378 DMIQGQVA-PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
            M+    + P+ FT AS L AC NL +  + +Q++ H ++        VGN+LISMY++S
Sbjct: 267 KMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISMYSKS 326

Query: 437 GRME---------------------------------DARKAFESLFEKNLVSYNTMVDA 463
           G +E                                  AR+ F+SL  +++V++  M+  
Sbjct: 327 GGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSLRVRDVVAWTAMIVG 386

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           Y +N  ++ A EL   +   G   + YT A++LS +SS+ ++  G QIHA   +SG  S+
Sbjct: 387 YVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGNASS 446

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
             + NALI+MY++  ++  A  VF  +   R+ I+WTSMI   A+HG    AL +F +ML
Sbjct: 447 VSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFERML 506

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
            +GIKP+ ITY+ VLSAC+H GL+ +G  ++  M + H I+    HYACM+DL GR+G L
Sbjct: 507 ENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLL 566

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA  FI +MP+  DV+ W + L +C+VH + EL + AAE +L  +P++  A+  L+N+Y
Sbjct: 567 QEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPENSGAYSALANVY 626

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           ++ G WE  ANIRK MK++ + K+ G SW++  NKVH F V +  HP+   IY  + ++ 
Sbjct: 627 SACGQWENAANIRKSMKDKGVKKDQGFSWVQIKNKVHIFGVDDGLHPQRDAIYEMMAKIW 686

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
            +IK+ G++PDT  VLH+LEEE K Q L  HSEK+A+AFGLI T ++  +R+ KNLRVC 
Sbjct: 687 KEIKKMGFVPDTESVLHDLEEELKEQILSHHSEKLAIAFGLICTPENTTLRIMKNLRVCN 746

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           DCH+AIK+IS + GREI++RD+ RFHH K+G CSC DYW
Sbjct: 747 DCHSAIKFISKLVGREIIVRDATRFHHFKNGLCSCRDYW 785



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 153/591 (25%), Positives = 283/591 (47%), Gaps = 110/591 (18%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           D Y+  L+  ++ ++   GK +H+ + ++ L     ++N+L++ Y+K G + +A+++F  
Sbjct: 14  DPYTSFLQRSLKFKDPFTGKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDE 73

Query: 139 MGNKR------------------------------DIVSWSSMISSYVNRGKQVDAIHMF 168
           M  K                               D VSW++MI  Y   G+  +AI MF
Sbjct: 74  MPVKSVFSWNIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMF 133

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            EM+     P ++  + V+ +C+  E + IG  ++ F++K G   S + V  +L++M+ K
Sbjct: 134 REMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHG-LSSYISVANSLLNMYAK 192

Query: 229 --------------------------------GSVDLESAYKVFDKMTEKNTVGWTLMIT 256
                                           G VDL  A   F++M E++ V W  MI+
Sbjct: 193 SGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDL--AQVQFEQMIERDVVSWNAMIS 250

Query: 257 RCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
              Q G  R+A+ +F  M++ S   PD+FTL+  +SAC+ LE    GKQ+H+  IRT   
Sbjct: 251 GYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFD 310

Query: 316 LDVCVGCSLVDMYAK----------------CTVD--------------GSVDDSRKVFD 345
               VG +L+ MY+K                  +D              G ++ +R++FD
Sbjct: 311 TFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFD 370

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            +   +V++WTA+I GYVQ+ G +++A++LF  MI+    PN++T A++L    +L   +
Sbjct: 371 SLRVRDVVAWTAMIVGYVQN-GFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLD 429

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAY 464
              Q++  A + G A    V N+LI+MYA+SG + DAR  F  + ++++ +++ +M+ A 
Sbjct: 430 HGRQIHASATRSGNASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIAL 489

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           A++   E+A  L   + + G+     T+  +LS  + +G + +G   +  +     ++ H
Sbjct: 490 AQHGLGEEALTLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLM-----QNAH 544

Query: 525 CI------YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            I      Y  +I ++ R   ++ A    + M  + +VI+W S++     H
Sbjct: 545 KIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGSLLASCKVH 595



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 149/579 (25%), Positives = 255/579 (44%), Gaps = 135/579 (23%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ + AI     M      P   T + +L SC       +G+ VHS + +  L     + 
Sbjct: 124 GQFENAIGMFREMVSDDVPPTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVA 183

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNK------------------------------RDIV 146
           NSL+++Y+K GD   A  +F  M  K                              RD+V
Sbjct: 184 NSLLNMYAKSGDPVTAKIVFDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVV 243

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           SW++MIS Y   G   +A+ +F +ML +    P+++  ++ + AC+N EN+ +G  I+  
Sbjct: 244 SWNAMISGYNQHGFDREALDIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAH 303

Query: 206 LLKCGYFDSDVCVGCALIDMFVK-GSV-------------------------------DL 233
           +++   FD+   VG ALI M+ K G V                               D+
Sbjct: 304 IIRT-EFDTFGAVGNALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDI 362

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A ++FD +  ++ V WT MI    Q G  +DA+ LF  MI  G  P+ +TL+ ++S  
Sbjct: 363 NPARRIFDSLRVRDVVAWTAMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVS 422

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
           S L     G+Q+H+ A R+G A  V V  +L+ MYAK    GS++D+R VF+ +    + 
Sbjct: 423 SSLASLDHGRQIHASATRSGNASSVSVSNALITMYAKS---GSINDARWVFNLIHWKRDT 479

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++WT++I    Q  G  +EA+ LF  M++  + P+H T+  VL AC            + 
Sbjct: 480 ITWTSMIIALAQH-GLGEEALTLFERMLENGIKPDHITYVGVLSAC-----------THV 527

Query: 413 HAVKRGRALDDCVGNS------------LISMYARSGRMEDARKAFESL-FEKNLVSYNT 459
             V++GR+  + + N+            +I ++ R+G +++A    E++  E +++++ +
Sbjct: 528 GLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRAGLLQEAHAFIENMPIEPDVIAWGS 587

Query: 460 MVDAYAKNLN---SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           ++ +   + N   +E A E L  IE    G                              
Sbjct: 588 LLASCKVHKNVELAEVAAERLLLIEPENSGA----------------------------- 618

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
                     Y+AL ++YS C   E A  + K M+D+ V
Sbjct: 619 ----------YSALANVYSACGQWENAANIRKSMKDKGV 647



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 101/398 (25%), Positives = 182/398 (45%), Gaps = 47/398 (11%)

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           IF+  LM    + PD  T +  L +C    N  LGK +H+ + R++ +    + N+LIS+
Sbjct: 264 IFSKMLM-DSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGNALISM 322

Query: 123 YSKC---------------------------------GDLNEANKIFKSMGNKRDIVSWS 149
           YSK                                  GD+N A +IF S+   RD+V+W+
Sbjct: 323 YSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGDINPARRIFDSL-RVRDVVAWT 381

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           +MI  YV  G   DA+ +F  M++ G  PN Y  + ++   S+  ++  G  I+    + 
Sbjct: 382 AMIVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRS 441

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLGCPRDAI 268
           G   S V V  ALI M+ K S  +  A  VF+ +  +++T+ WT MI    Q G   +A+
Sbjct: 442 GN-ASSVSVSNALITMYAK-SGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEAL 499

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC--VGCSLVD 326
            LF  M+ +G  PD  T  GV+SAC+ + L   G+  ++        +       C ++D
Sbjct: 500 TLFERMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYAC-MID 558

Query: 327 MYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG-YVQSGGRDKEAVKLFSDMIQGQV 384
           ++ +    G + ++    + M ++ +V++W +++    V       E       +I+ + 
Sbjct: 559 LFGRA---GLLQEAHAFIENMPIEPDVIAWGSLLASCKVHKNVELAEVAAERLLLIEPEN 615

Query: 385 APNHFTFASVLKACGNLLD-SNVAEQVYTHAVKRGRAL 421
           +  +   A+V  ACG   + +N+ + +    VK+ +  
Sbjct: 616 SGAYSALANVYSACGQWENAANIRKSMKDKGVKKDQGF 653



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 42/284 (14%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N ++S YA+ GR+E+A + FE + E + VS+  M+  Y +    E A  +  E+    V 
Sbjct: 83  NIILSGYAKGGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVP 142

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN------- 539
            + +T  ++L+  +++  +G G ++H+ ++K G  S   + N+L++MY++  +       
Sbjct: 143 PTQFTLTNVLASCAAVECLGIGRKVHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIV 202

Query: 540 ------------------------VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
                                   V+ A   F++M +R+V+SW +MI+G+ +HGF   AL
Sbjct: 203 FDRMKLKSTSSWNTMISSHMQSGLVDLAQVQFEQMIERDVVSWNAMISGYNQHGFDREAL 262

Query: 576 EIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEGWK-H---FRSMYDEHGIVQRMEHYA 630
           +IF KML D   KP+  T  + LSAC++   +  G + H    R+ +D  G V       
Sbjct: 263 DIFSKMLMDSSSKPDKFTLASALSACANLENLKLGKQIHAHIIRTEFDTFGAVGN----- 317

Query: 631 CMVDLLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGD 673
            ++ +  +SG +  A + I +SM  + DV+ +   L      GD
Sbjct: 318 ALISMYSKSGGVEIAQKIIEQSMISNLDVIAFTALLDGYVKLGD 361



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 2/210 (0%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ ++ +G  Q A+     M ++G  P+  T + +L       +   G+ +H+  TRS  
Sbjct: 384 IVGYVQNGFNQDAMELFRSMIKEGPKPNNYTLATMLSVSSSLASLDHGRQIHASATRSGN 443

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +  + N+LI++Y+K G +N+A  +F  +  KRD ++W+SMI +    G   +A+ +F 
Sbjct: 444 ASSVSVSNALITMYAKSGSINDARWVFNLIHWKRDTITWTSMIIALAQHGLGEEALTLFE 503

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            MLE G  P+   +  V+ AC++   V  G   Y  +               +ID+F + 
Sbjct: 504 RMLENGIKPDHITYVGVLSACTHVGLVEQGRSYYNLMQNAHKIIPTPSHYACMIDLFGRA 563

Query: 230 SVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
            + L+ A+   + M  E + + W  ++  C
Sbjct: 564 GL-LQEAHAFIENMPIEPDVIAWGSLLASC 592



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 53/212 (25%), Positives = 97/212 (45%), Gaps = 33/212 (15%)

Query: 508 GEQIHARIIKSG-----FESNHCI--------------------------YNALISMYSR 536
           G+ IHARIIK+G     F  N+ +                          +N ++S Y++
Sbjct: 32  GKSIHARIIKAGLHLGVFLMNNLMNFYAKTGFIYDAHRVFDEMPVKSVFSWNIILSGYAK 91

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
              +E A +VF+EM + + +SWT+MI G+ + G    A+ +F +M++D + P   T   V
Sbjct: 92  GGRLEEAHRVFEEMPEPDSVSWTAMIVGYNQMGQFENAIGMFREMVSDDVPPTQFTLTNV 151

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L++C+    +  G K   S   +HG+   +     ++++  +SG    A      M L +
Sbjct: 152 LASCAAVECLGIGRK-VHSFVVKHGLSSYISVANSLLNMYAKSGDPVTAKIVFDRMKLKS 210

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
               W T + +    G  +L +   E ++E+D
Sbjct: 211 -TSSWNTMISSHMQSGLVDLAQVQFEQMIERD 241


>gi|449487256|ref|XP_004157540.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 268/695 (38%), Positives = 407/695 (58%), Gaps = 68/695 (9%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           + E + ++  +M + + V WT +I    Q G   +AI +F  MI     P +FT+S V+S
Sbjct: 91  NFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLS 150

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +C+  +    G+++HS+ ++ GL   V V  SL++MYAKC   G    ++ VFDRM   N
Sbjct: 151 SCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKC---GDPVIAKVVFDRMTVKN 207

Query: 352 VMSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMI- 380
           + +W A+I+ Y+QSG                              G + EA+ +FS M+ 
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLN 267

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +  + P++FT AS+L AC NL   N+ +Q++ + ++        VGN+LISMYA+SG +E
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 441 ---------------------------------DARKAFESLFEKNLVSYNTMVDAYAKN 467
                                             AR+ F  L ++++V++  M+  Y +N
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
                A EL   + + G   ++YT A++LS +SS+  +  G+QIHA  IK+G  S   + 
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 528 NALISMYSRCANVEAAFQVFK-EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           NALI+MY++  N+  A +VF      + ++SWTSMI   A+HG    A+ +F +ML+ G+
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+ ITY+ VLSAC+H GL+ +G K++  M + H I   + HYACM+DL GR+G L EA 
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            FI SMP+  D + W + L +C++H + +L K AAE +L  DP +  A++ L+N+Y++ G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE  A  RK MK+R + KE G SWI   N+VH F V +  HP+  EIY  + ++  +IK
Sbjct: 628 KWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIK 687

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           + G++PDT  VLH+LEEE K Q L  HSEK+A+AFGL++T ++  +R+ KNLRVC DCH+
Sbjct: 688 KMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHS 747

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK+IS + GREI++RD+ RFHH KDG CSC DYW
Sbjct: 748 AIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 164/627 (26%), Positives = 295/627 (47%), Gaps = 103/627 (16%)

Query: 73  GNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           GN P   + ++ +L++ +R ++   G+ VH  + +  L     ++N+L++ Y+K G L  
Sbjct: 4   GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63

Query: 132 ANKIFKSM------------------GN----KR--------DIVSWSSMISSYVNRGKQ 161
           A+ +F  M                  GN    +R        D VSW+++I  Y   G  
Sbjct: 64  AHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
            +AI MF +M+     P+++  S V+ +C+  + + IG  I+ F++K G   S V V  +
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLG-LGSCVPVATS 182

Query: 222 LIDMFVK------------------------------GSVDLESAYKVFDKMTEKNTVGW 251
           L++M+ K                               S   E A   F+KM +++ V W
Sbjct: 183 LLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAI 310
             MI+  +Q G   +A+ +F  M+    L PD FTL+ ++SAC+ LE    GKQ+H++ +
Sbjct: 243 NSMISGYSQQGYNLEALAIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302

Query: 311 RTGLALDVCVGCSLVDMYAKC------------------------------TVDGSVDDS 340
           R        VG +L+ MYAK                               T  G+V  +
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R++F+++ D +V++WTA+I GYVQ+G  + +A++LF  M+     PN +T A++L    +
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWN-DALELFRLMVNEGPEPNSYTLAAMLSVSSS 421

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE-SLFEKNLVSYNT 459
           L      +Q++  A+K G +    V N+LI+MYA++G +  A++ F+    +K +VS+ +
Sbjct: 422 LTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTS 481

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-S 518
           M+ A A++   ++A  L   +   G+     T+  +LS  + +G + +G + +  + +  
Sbjct: 482 MIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEI 577
             E     Y  +I +Y R   ++ A+   + M  + + I+W S++     H  A  A   
Sbjct: 542 EIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVA 601

Query: 578 FYKMLADGIKP-NGITYIA---VLSAC 600
             ++L   I P N   Y+A   V SAC
Sbjct: 602 AERLLL--IDPGNSGAYLALANVYSAC 626



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 258/605 (42%), Gaps = 138/605 (22%)

Query: 46  LSNRLIYHLND----------------GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           +S RL+Y + D                G    AI+    M  +   P   T S +L SC 
Sbjct: 94  VSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCA 153

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK------- 142
            ++   +G+ +HS + +  L     +  SL+++Y+KCGD   A  +F  M  K       
Sbjct: 154 ANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNA 213

Query: 143 -----------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCP 178
                                  RDIVSW+SMIS Y  +G  ++A+ +F +ML E    P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALAIFSKMLNEPSLKP 273

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL---- 233
           + +  ++++ AC+N E + IG  I+ ++L+    ++   VG ALI M+ K G V++    
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAET-ETSGAVGNALISMYAKSGGVEIARLI 332

Query: 234 ---------------------------ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
                                      + A ++F+K+ +++ V WT MI    Q G   D
Sbjct: 333 VEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWND 392

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+ LF  M+  G  P+ +TL+ ++S  S L +   GKQ+H+ AI+ G +    V  +L+ 
Sbjct: 393 ALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIA 452

Query: 327 MYAKCTVDGSVDDSRKVFD-RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           MYAK    G+++ +++VFD       ++SWT++I    Q  G  KEA+ LF  M+   + 
Sbjct: 453 MYAKT---GNINVAKRVFDLPNGKKEIVSWTSMIMALAQH-GLGKEAINLFERMLSVGMK 508

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+H T+  VL AC             TH                       G +E  RK 
Sbjct: 509 PDHITYVGVLSAC-------------THV----------------------GLVEQGRKY 533

Query: 446 FESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +  +      E  L  Y  M+D Y +    ++A+     IE   +      + SLL+   
Sbjct: 534 YNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF---IESMPIEPDNIAWGSLLASCK 590

Query: 501 --SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV--- 555
                 + K       +I  G   N   Y AL ++YS C   E A Q  K M+DR V   
Sbjct: 591 IHKNADLAKVAAERLLLIDPG---NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKE 647

Query: 556 --ISW 558
             ISW
Sbjct: 648 KGISW 652



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 63/275 (22%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FA +L+    + D      V+   +K+G  L   + N+L++ YA++G +  A   F+ + 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-------------------------- 484
            K+  S+NT++  YAK  N E +  LL+E+ D                            
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 485 -----VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES----------------- 522
                V  S +T +++LS  ++   +  G +IH+ ++K G  S                 
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 523 --------------NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
                         N   +NALIS+Y +    E A   F++M DR+++SW SMI+G+++ 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 569 GFAARALEIFYKMLAD-GIKPNGITYIAVLSACSH 602
           G+   AL IF KML +  +KP+  T  ++LSAC++
Sbjct: 253 GYNLEALAIFSKMLNEPSLKPDNFTLASILSACAN 287



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 19/245 (7%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           TS+  FA +L  +  I     G  +H +IIK G      + N L++ Y++  ++  A  V
Sbjct: 8   TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F EM  ++  SW ++I+G+AK G      E+  ++L +    + +++ A++   +  GL 
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQG----NFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE-------FIRSMPLSADVL 659
                 F  M     I +R+      V  +  S +  + L+       F+  + L + V 
Sbjct: 124 DNAIWMFAKM-----ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVP 178

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           V  + L      GD  + K   + +  ++     A   L +LY  +G +E  A+  ++M 
Sbjct: 179 VATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNA---LISLYMQSGQFELAASQFEKMP 235

Query: 720 ERNLI 724
           +R+++
Sbjct: 236 DRDIV 240


>gi|449439005|ref|XP_004137278.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
 gi|449476583|ref|XP_004154777.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Cucumis sativus]
          Length = 816

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 281/774 (36%), Positives = 458/774 (59%), Gaps = 21/774 (2%)

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           HL K +H+LL  S    +  +   LI+ Y+  GD+  A   F  +  K D+ +W+SMIS+
Sbjct: 57  HLAKQLHALLVVSGKTQSIFLSAKLINRYAFLGDIPHARLTFDQIQTK-DVYTWNSMISA 115

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNE-YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           Y   G    A+  F E L   F  ++ Y F  VIRAC N ++   G  ++  +LK G F+
Sbjct: 116 YARIGHFHAAVDCFNEFLSTSFLQSDHYTFPPVIRACGNLDD---GRKVHCLVLKLG-FE 171

Query: 214 SDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
            DV +  + I  + + G V L  A  +FD M  ++   W  MI+     G   +A+ +F 
Sbjct: 172 CDVYIAASFIHFYSRFGFVSL--ACNLFDNMMIRDIGTWNAMISGFYLNGKVAEALEVFD 229

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           +M       D  T+S ++  C +L+   SG  +H +AI+ GL  D+ V  +L++MYAK  
Sbjct: 230 EMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEFDLFVCNALINMYAKF- 288

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF- 391
             G +  +  +F++M   +++SW +++  + Q+  +   A+ +++ M    V P+  T  
Sbjct: 289 --GELRSAETIFNQMKVRDIVSWNSLLAAFEQNK-KPVIALGVYNKMHSIGVVPDLLTLV 345

Query: 392 --ASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-CVGNSLISMYARSGRMEDARKAFES 448
             ASV    GN L S     ++    +R   L D  +GN++I MYA+ G ++ ARK FE 
Sbjct: 346 SLASVAAELGNFLSS---RSIHGFVTRRCWFLHDIALGNAIIDMYAKLGFIDSARKVFEG 402

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED-TGVGTSAYTFASLLSGASSIGAIGK 507
           L  K+++S+N+++  Y++N  + +A ++   +   +G   +  T+ S+L+  S +GA+ +
Sbjct: 403 LPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSILTAHSQLGALKQ 462

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G + H ++IK+    +  +   L+ MY +C  +  A  +F E+  ++ +SW ++I+    
Sbjct: 463 GMKAHGQLIKNFLYFDIFVSTCLVDMYGKCGKLADALSLFYEVPHQSSVSWNAIISCHGL 522

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG+  +A+++F +M ++G+KP+ IT++++LSACSH+GL+ EG   F+ M + +GI   ++
Sbjct: 523 HGYGLKAVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQWCFQLMQETYGIRPSLK 582

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HY CMVDL GR+G L +A  F+++MP+  DV VW   LGACR+H + EL +  ++ +L+ 
Sbjct: 583 HYGCMVDLFGRAGHLEKAFNFVKNMPVRPDVSVWGALLGACRIHENVELVRTVSDHLLKV 642

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           + ++   ++LLSN+YA  GHWE V  +R   ++R L K  G S IE D K+  F+ G  +
Sbjct: 643 ESENVGYYVLLSNIYAKLGHWEGVDEVRSLARDRGLKKTPGWSSIEVDKKIDVFYTGNQT 702

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS 807
           HPK  EIY+EL  L  K+K  GY+PD NFVL ++E+++K   L  HSE++A+AFG+IST 
Sbjct: 703 HPKCEEIYSELRNLTAKMKSIGYVPDYNFVLQDVEDDEKENILTSHSERLAMAFGIISTP 762

Query: 808 KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
               +++FKNLRVCGDCH A K+IS +T REI++RDSNRFHH KDG CSC DYW
Sbjct: 763 PKTTLQIFKNLRVCGDCHNATKFISKITEREIIVRDSNRFHHFKDGVCSCGDYW 816



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 247/487 (50%), Gaps = 14/487 (2%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+  ++++C    N   G+ VH L+ +   E +  I  S I  YS+ G ++ A  +F +M
Sbjct: 144 TFPPVIRAC---GNLDDGRKVHCLVLKLGFECDVYIAASFIHFYSRFGFVSLACNLFDNM 200

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
              RDI +W++MIS +   GK  +A+ +F EM       +    S+++  C   +++  G
Sbjct: 201 -MIRDIGTWNAMISGFYLNGKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISG 259

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            +I+ + +K G  + D+ V  ALI+M+ K   +L SA  +F++M  ++ V W  ++    
Sbjct: 260 VLIHVYAIKLG-LEFDLFVCNALINMYAKFG-ELRSAETIFNQMKVRDIVSWNSLLAAFE 317

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL-DV 318
           Q   P  A+ ++  M   G +PD  TL  + S  +EL  F S + +H +  R    L D+
Sbjct: 318 QNKKPVIALGVYNKMHSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDI 377

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +G +++DMYAK    G +D +RKVF+ +   +V+SW ++ITGY Q+G  + EA+ ++S 
Sbjct: 378 ALGNAIIDMYAKL---GFIDSARKVFEGLPVKDVISWNSLITGYSQNGLAN-EAIDVYSS 433

Query: 379 M-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           M       PN  T+ S+L A   L       + +   +K     D  V   L+ MY + G
Sbjct: 434 MRYYSGAVPNQGTWVSILTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKCG 493

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           ++ DA   F  +  ++ VS+N ++  +  +    KA +L  E++  GV     TF SLLS
Sbjct: 494 KLADALSLFYEVPHQSSVSWNAIISCHGLHGYGLKAVKLFKEMQSEGVKPDHITFVSLLS 553

Query: 498 GASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
             S  G + +G+     + ++ G   +   Y  ++ ++ R  ++E AF   K M  R  +
Sbjct: 554 ACSHSGLVDEGQWCFQLMQETYGIRPSLKHYGCMVDLFGRAGHLEKAFNFVKNMPVRPDV 613

Query: 557 S-WTSMI 562
           S W +++
Sbjct: 614 SVWGALL 620



 Score =  172 bits (435), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 212/410 (51%), Gaps = 24/410 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           ++LN G+V +A+   D M  K    D  T S LL  C++  +   G L+H    +  LE 
Sbjct: 215 FYLN-GKVAEALEVFDEMRFKSVSMDSVTISSLLPICVQLDDIISGVLIHVYAIKLGLEF 273

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  + N+LI++Y+K G+L  A  IF  M   RDIVSW+S+++++    K V A+ ++ +M
Sbjct: 274 DLFVCNALINMYAKFGELRSAETIFNQM-KVRDIVSWNSLLAAFEQNKKPVIALGVYNKM 332

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
             +G  P+     ++    +   N      I+GF+ +  +F  D+ +G A+IDM+ K G 
Sbjct: 333 HSIGVVPDLLTLVSLASVAAELGNFLSSRSIHGFVTRRCWFLHDIALGNAIIDMYAKLGF 392

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGV 289
           +D  SA KVF+ +  K+ + W  +IT  +Q G   +AI ++  M   SG +P++ T   +
Sbjct: 393 ID--SARKVFEGLPVKDVISWNSLITGYSQNGLANEAIDVYSSMRYYSGAVPNQGTWVSI 450

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++A S+L     G + H   I+  L  D+ V   LVDMY KC   G + D+  +F  +  
Sbjct: 451 LTAHSQLGALKQGMKAHGQLIKNFLYFDIFVSTCLVDMYGKC---GKLADALSLFYEVPH 507

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSN-- 405
            + +SW AII+ +   G   K AVKLF +M    V P+H TF S+L AC +  L+D    
Sbjct: 508 QSSVSWNAIISCHGLHGYGLK-AVKLFKEMQSEGVKPDHITFVSLLSACSHSGLVDEGQW 566

Query: 406 -VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
                  T+ ++       C    ++ ++ R+G +E   KAF   F KN+
Sbjct: 567 CFQLMQETYGIRPSLKHYGC----MVDLFGRAGHLE---KAFN--FVKNM 607


>gi|356510389|ref|XP_003523921.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 818

 Score =  518 bits (1333), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 277/791 (35%), Positives = 459/791 (58%), Gaps = 24/791 (3%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           HP +    +LL++C   +  +    +   + ++      +    +ISL+ K G  +EA +
Sbjct: 48  HPSV----VLLENCTSKKELYQ---ILPFIIKNGFYNEHLFQTKVISLFCKFGSNSEAAR 100

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCFSAVIRACSN 192
           +F+ +  K D++ +  M+  Y       DA+  F+ M+  E+     +Y  + +++ C  
Sbjct: 101 VFEHVELKLDVL-YHIMLKGYAKNSSLGDALCFFLRMMCDEVRLVVGDY--ACLLQLCGE 157

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
             ++  G  I+G ++  G F+S++ V  A++ ++ K    +++AYK+F++M  K+ V WT
Sbjct: 158 NLDLKKGREIHGLIITNG-FESNLFVMTAVMSLYAKCR-QIDNAYKMFERMQHKDLVSWT 215

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            ++    Q G  + A++L L M  +G  PD  TL  ++ A ++++    G+ +H +A R+
Sbjct: 216 TLVAGYAQNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRS 275

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G    V V  +L+DMY KC   GS   +R VF  M    V+SW  +I G  Q+G   +EA
Sbjct: 276 GFESLVNVTNALLDMYFKC---GSARIARLVFKGMRSKTVVSWNTMIDGCAQNG-ESEEA 331

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--NSLI 430
              F  M+     P   T   VL AC NL D  +    + H +     LD  V   NSLI
Sbjct: 332 FATFLKMLDEGEVPTRVTMMGVLLACANLGD--LERGWFVHKLLDKLKLDSNVSVMNSLI 389

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           SMY++  R++ A   F +L EK  V++N M+  YA+N   ++A  L   ++  G+    +
Sbjct: 390 SMYSKCKRVDIAASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCF 448

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           T   +++  +      + + IH   +++  ++N  +  AL+ MY++C  ++ A ++F  M
Sbjct: 449 TLVGVITALADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKCGAIKTARKLFDMM 508

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           ++R+VI+W +MI G+  HG     L++F +M    +KPN IT+++V+SACSH+G + EG 
Sbjct: 509 QERHVITWNAMIDGYGTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGL 568

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
             F+SM +++ +   M+HY+ MVDLLGR+G L +A  FI+ MP+   + V    LGAC++
Sbjct: 569 LLFKSMQEDYYLEPTMDHYSAMVDLLGRAGQLDDAWNFIQEMPIKPGISVLGAMLGACKI 628

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           H + ELG+ AA+ + + DP +   H+LL+N+YAS   W+ VA +R  M+++ L K  GCS
Sbjct: 629 HKNVELGEKAAQKLFKLDPDEGGYHVLLANIYASNSMWDKVAKVRTAMEDKGLHKTPGCS 688

Query: 731 WIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYL 790
           W+E  N++H F+ G T+HP++ +IYA L+ L  +IK  GY+PD + + H++EE+ K Q L
Sbjct: 689 WVELRNEIHTFYSGSTNHPESKKIYAFLETLGDEIKAAGYVPDPDSI-HDVEEDVKKQLL 747

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
             HSE++A+AFGL++TS    + + KNLRVCGDCH   KYIS+VTGREI++RD  RFHH 
Sbjct: 748 SSHSERLAIAFGLLNTSPGTTLHIRKNLRVCGDCHDTTKYISLVTGREIIVRDLRRFHHF 807

Query: 851 KDGKCSCNDYW 861
           K+G CSC DYW
Sbjct: 808 KNGSCSCGDYW 818



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 127/397 (31%), Positives = 205/397 (51%), Gaps = 25/397 (6%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++A+  +  M + G  PD  T   +L +    +   +G+ +H    RS  E    
Sbjct: 223 QNGHAKRALQLVLQMQEAGQKPDSVTLVSILPAVADMKALRIGRSIHGYAFRSGFESLVN 282

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+ +Y KCG    A  +FK M +K  +VSW++MI      G+  +A   F++ML+ 
Sbjct: 283 VTNALLDMYFKCGSARIARLVFKGMRSKT-VVSWNTMIDGCAQNGESEEAFATFLKMLDE 341

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P       V+ AC+N  ++  G  ++  L K    DS+V V  +LI M+ K   VD+
Sbjct: 342 GEVPTRVTMMGVLLACANLGDLERGWFVHKLLDKLK-LDSNVSVMNSLISMYSKCKRVDI 400

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A  +F+ + EK  V W  MI    Q GC ++A+ LF  M   G   D FTL GV++A 
Sbjct: 401 --AASIFNNL-EKTNVTWNAMILGYAQNGCVKEALNLFCMMQSQGIKLDCFTLVGVITAL 457

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           ++  +    K +H  A+R  +  +V V  +LVDMYAKC   G++  +RK+FD M + +V+
Sbjct: 458 ADFSVNRQAKWIHGLAVRACMDNNVFVSTALVDMYAKC---GAIKTARKLFDMMQERHVI 514

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--------GNLLDSN 405
           +W A+I GY  + G  KE + LF++M +G V PN  TF SV+ AC        G LL  +
Sbjct: 515 TWNAMIDGY-GTHGVGKETLDLFNEMQKGAVKPNDITFLSVISACSHSGFVEEGLLLFKS 573

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           + E  Y        +       +++ +  R+G+++DA
Sbjct: 574 MQEDYYLEPTMDHYS-------AMVDLLGRAGQLDDA 603


>gi|357135382|ref|XP_003569289.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Brachypodium distachyon]
          Length = 1054

 Score =  517 bits (1332), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 286/754 (37%), Positives = 453/754 (60%), Gaps = 17/754 (2%)

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++L+S +++ G L+EA  IF ++  +R+ V+ + +I   V +    +A+ +F+   +  F
Sbjct: 309  SALVSAFARHGMLDEAKDIFINL-KERNAVTLNGLIVGLVKQHCSEEAVGIFMGTRD-SF 366

Query: 177  CPNEYCFSAVIRACSN----TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
              N   F  ++ A +      + +  G  ++G +L+ G  D  + +   L++M+ K G++
Sbjct: 367  VVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426

Query: 232  DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            D   A +VF  +  ++ V W  +I+   Q G    A+  +  M      P  F     +S
Sbjct: 427  D--KASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLS 484

Query: 292  ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            +C+ L L T+G+Q+H  A++ GL LD  V  +LV MY  C   G+  +S ++F+ M +H+
Sbjct: 485  SCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDC---GARSESWEIFNSMAEHD 541

Query: 352  VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++SW +I+   V S     E+V++FS+M++  + PN  TF ++L A   L    + +QV+
Sbjct: 542  IVSWNSIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELGKQVH 601

Query: 412  THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKNLNS 470
               +K G   D+ V N+L+S YA+SG M+   + F S+   ++ VS+N+M+  Y  N + 
Sbjct: 602  AVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHL 661

Query: 471  EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
            ++  + +  +  +       TF+ +L+  +S+ A+ +G ++HA  I+S  ES+  + +AL
Sbjct: 662  QETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESAL 721

Query: 531  ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
            + MYS+C  ++ A +VF  M  +N  SW SMI+G+A+HG   +ALEIF +M  +G  P+ 
Sbjct: 722  LDMYSKCGRIDYASKVFNSMSQKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDH 781

Query: 591  ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
            +T+++VLSACSHAGL+  G  +F  M ++HGI+  +EHY+C++DLLGR+G L +  E+I 
Sbjct: 782  VTFVSVLSACSHAGLVDRGLDYFE-MMEDHGILPHIEHYSCVIDLLGRAGKLLKIQEYIN 840

Query: 651  SMPLSADVLVWRTFLGACRVHGD---TELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
             MP+  + L+WRT L ACR   D    +LGK A+ M+LE +PQ+P  ++L SN YA+ G 
Sbjct: 841  RMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLELEPQNPVNYVLASNFYAATGR 900

Query: 708  WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
            WE  A  R  M    + KEAG SW+   + VH F  G+ SHP T EIY +L+ L  KIK 
Sbjct: 901  WEDTAKARAAMGGAAMKKEAGQSWVTLGDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIKN 960

Query: 768  FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
             GY+P T F L++LEEE K + L  HSEK+AVAF L  +S   PIR+ KNLRVCGDCHTA
Sbjct: 961  AGYVPMTEFALYDLEEENKEELLSYHSEKLAVAFVLTRSSSDVPIRIMKNLRVCGDCHTA 1020

Query: 828  IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             +YIS +  R+I+LRDS RFHH +DGKCSC DYW
Sbjct: 1021 FRYISQIVCRQIILRDSIRFHHFEDGKCSCGDYW 1054



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 169/631 (26%), Positives = 324/631 (51%), Gaps = 44/631 (6%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKC--GDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           VH L++++    N+ + N+LIS+Y  C  G   +A ++F +    RD+++W++++S Y  
Sbjct: 184 VHGLVSKTIYASNTTVCNALISMYGNCSVGLPLQAQQVFDTT-PVRDLITWNALMSVYAK 242

Query: 158 RGKQVDAIHMFVEMLE----LGFCPNEYCFSAVIRACS-NTENVAIGHIIYGFLLKCGYF 212
           +G  V    +F+ ML     +   PNE+ F ++I A S ++ +  +   ++  +LK G  
Sbjct: 243 KGYVVSTFTLFMAMLHDDSAIELRPNEHTFGSLITATSLSSCSSGVLDQVFARVLKSGS- 301

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
            SD+ VG AL+  F +  + L+ A  +F  + E+N V    +I    +  C  +A+ +F+
Sbjct: 302 SSDLYVGSALVSAFARHGM-LDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFM 360

Query: 273 DMILSGFLPDRFTLSGVVSACSELEL----FTSGKQLHSWAIRTGLA-LDVCVGCSLVDM 327
                 F+ +  T   ++SA +E  +       G+++H   +RTGL  L + +   LV+M
Sbjct: 361 G-TRDSFVVNTDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNM 419

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           YAKC   G++D + +VF  +   + +SW  II+   Q+G  +  A+  +  M QG ++P+
Sbjct: 420 YAKC---GAIDKASRVFRLLCARDRVSWNTIISVLDQNGFCEG-AMMNYCMMRQGCISPS 475

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
           +F   S L +C +L      +QV+  AVK G  LD  V N+L+ MY   G   ++ + F 
Sbjct: 476 NFAAISGLSSCASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFN 535

Query: 448 SLFEKNLVSYNT----MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           S+ E ++VS+N+    MV ++A    + ++ E+   +  +G+  +  TF +LLS  S + 
Sbjct: 536 SMAEHDIVSWNSIMGVMVSSHAP---TAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLS 592

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISWTSMI 562
            +  G+Q+HA ++K G   ++ + NAL+S Y++  ++++  Q+F  M   R+ +SW SMI
Sbjct: 593 VLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMI 652

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH----FRSMYD 618
           +G+  +G     ++  + M+      +  T+  VL+AC+    +  G +      RS  +
Sbjct: 653 SGYIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLE 712

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
              +V+     + ++D+  + G +  A +   SM    +   W + +     HG   LG+
Sbjct: 713 SDVVVE-----SALLDMYSKCGRIDYASKVFNSMS-QKNEFSWNSMISGYARHG---LGE 763

Query: 679 HAAEMILEQDPQDPAA--HILLSNLYASAGH 707
            A E I E+  ++ A   H+   ++ ++  H
Sbjct: 764 KALE-IFEEMQRNGACPDHVTFVSVLSACSH 793



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 173/718 (24%), Positives = 324/718 (45%), Gaps = 78/718 (10%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  L +  L  +  + N L++LY+K   L  A ++F  M  +R+ VSW+ ++S YV  G
Sbjct: 78  LHLELVKRGLTHDLFLSNHLVNLYAKGSRLAAARQVFDGM-LERNAVSWTCLVSGYVLSG 136

Query: 160 KQVDAIHMFVEMLELG--FC-PNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDS 214
              +A  +F  ML  G  F  P  + F +V+RAC +   + +A    ++G + K  Y  S
Sbjct: 137 ITDEAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKTIY-AS 195

Query: 215 DVCVGCALIDMFVKGSVDLE-SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +  V  ALI M+   SV L   A +VFD    ++ + W  +++   + G       LF+ 
Sbjct: 196 NTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFTLFMA 255

Query: 274 MILSG----FLPDRFTLSGVVSACSELELFTSG--KQLHSWAIRTGLALDVCVGCSLVDM 327
           M+         P+  T   +++A S L   +SG   Q+ +  +++G + D+ VG +LV  
Sbjct: 256 MLHDDSAIELRPNEHTFGSLITATS-LSSCSSGVLDQVFARVLKSGSSSDLYVGSALVSA 314

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           +A+    G +D+++ +F  + + N ++   +I G V+    + EAV +F       V  N
Sbjct: 315 FAR---HGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSE-EAVGIFMGTRDSFVV-N 369

Query: 388 HFTFASVLKACGNLLDSNVAE-------QVYTHAVKRGRA-LDDCVGNSLISMYARSGRM 439
             TF  +L A       ++ E       +V+ H ++ G   L   + N L++MYA+ G +
Sbjct: 370 TDTFVVLLSAVAEF---SIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAI 426

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + A + F  L  ++ VS+NT++    +N   E A      +    +  S +   S LS  
Sbjct: 427 DKASRVFRLLCARDRVSWNTIISVLDQNGFCEGAMMNYCMMRQGCISPSNFAAISGLSSC 486

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +S+  +  G+Q+H   +K G + +  + NAL+ MY  C     ++++F  M + +++SW 
Sbjct: 487 ASLRLLTAGQQVHCDAVKWGLDLDTSVSNALVKMYGDCGARSESWEIFNSMAEHDIVSWN 546

Query: 560 SMI-TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           S++    + H   A ++E+F  M+  G+ PN +T++ +LSA S   ++  G K   ++  
Sbjct: 547 SIMGVMVSSHAPTAESVEVFSNMMRSGLTPNKVTFVNLLSALSPLSVLELG-KQVHAVVL 605

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE--- 675
           +HG ++       ++    +SG +    +   SM    D + W + +     +G  +   
Sbjct: 606 KHGAIEDNAVDNALMSCYAKSGDMDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETM 665

Query: 676 ----LGKHAAEM-----------------------------ILEQDPQDPAAHILLSNLY 702
               L  H+ +M                             I  Q   D      L ++Y
Sbjct: 666 DCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESDVVVESALLDMY 725

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +  G  +Y + +   M ++N       SW    +   +  +GE    K LEI+ E+ +
Sbjct: 726 SKCGRIDYASKVFNSMSQKNEF-----SWNSMISGYARHGLGE----KALEIFEEMQR 774



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 213/420 (50%), Gaps = 25/420 (5%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           ++LH   ++ GL  D+ +   LV++YAK +    +  +R+VFD ML+ N +SWT +++GY
Sbjct: 76  ERLHLELVKRGLTHDLFLSNHLVNLYAKGS---RLAAARQVFDGMLERNAVSWTCLVSGY 132

Query: 363 VQSGGRDKEAVKLFSDMI-QGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAV--KR 417
           V SG  D EA ++F  M+ +G     P  FTF SVL+AC +     +A  V  H +  K 
Sbjct: 133 VLSGITD-EAFRVFKAMLWEGSEFSRPTPFTFGSVLRACQDAGPDLLAFAVQVHGLVSKT 191

Query: 418 GRALDDCVGNSLISMYARS--GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
             A +  V N+LISMY     G    A++ F++   ++L+++N ++  YAK       F 
Sbjct: 192 IYASNTTVCNALISMYGNCSVGLPLQAQQVFDTTPVRDLITWNALMSVYAKKGYVVSTFT 251

Query: 476 L----LHEIEDTGVGTSAYTFASLLSGASSIGAIGKG--EQIHARIIKSGFESNHCIYNA 529
           L    LH+     +  + +TF SL++ A+S+ +   G  +Q+ AR++KSG  S+  + +A
Sbjct: 252 LFMAMLHDDSAIELRPNEHTFGSLIT-ATSLSSCSSGVLDQVFARVLKSGSSSDLYVGSA 310

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L+S ++R   ++ A  +F  +++RN ++   +I G  K   +  A+ IF     D    N
Sbjct: 311 LVSAFARHGMLDEAKDIFINLKERNAVTLNGLIVGLVKQHCSEEAVGIFMGT-RDSFVVN 369

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYD---EHGIVQ-RMEHYACMVDLLGRSGSLTEA 645
             T++ +LSA +   +  +G    R ++      G++  ++     +V++  + G++ +A
Sbjct: 370 TDTFVVLLSAVAEFSIPEDGLMRGREVHGHILRTGLIDLKIALSNGLVNMYAKCGAIDKA 429

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
               R +  + D + W T +     +G  E G      ++ Q    P+    +S L + A
Sbjct: 430 SRVFRLL-CARDRVSWNTIISVLDQNGFCE-GAMMNYCMMRQGCISPSNFAAISGLSSCA 487



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/346 (27%), Positives = 168/346 (48%), Gaps = 20/346 (5%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  P+  T+  LL +        LGK VH+++ +     ++ + N+L+S Y+K GD
Sbjct: 569 MMRSGLTPNKVTFVNLLSALSPLSVLELGKQVHAVVLKHGAIEDNAVDNALMSCYAKSGD 628

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRG---KQVDAIHMFVEMLELGFCPNEYCFSA 185
           ++   ++F SM  +RD VSW+SMIS Y+  G   + +D + + +   ++  C     FS 
Sbjct: 629 MDSCEQLFSSMSGRRDAVSWNSMISGYIYNGHLQETMDCVWLMMHSNQMLDCCT---FSI 685

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           V+ AC++   +  G  ++ F ++    +SDV V  AL+DM+ K G +D  S  KVF+ M+
Sbjct: 686 VLNACASVAALERGMEMHAFGIR-SQLESDVVVESALLDMYSKCGRIDYAS--KVFNSMS 742

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +KN   W  MI+   + G    A+ +F +M  +G  PD  T   V+SACS   L   G  
Sbjct: 743 QKNEFSWNSMISGYARHGLGEKALEIFEEMQRNGACPDHVTFVSVLSACSHAGLVDRGLD 802

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYV 363
                   G+   +     ++D+  +    G +   ++  +RM +  N + W  ++    
Sbjct: 803 YFEMMEDHGILPHIEHYSCVIDLLGRA---GKLLKIQEYINRMPMKPNTLIWRTVLVACR 859

Query: 364 QSGGRD-----KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           QS   D     KEA ++  ++ + Q   N+   ++   A G   D+
Sbjct: 860 QSKDGDRIDLGKEASRMLLEL-EPQNPVNYVLASNFYAATGRWEDT 904



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 8/228 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G +Q+ +  + LM       D  T+S++L +C        G  +H+   RS+LE +
Sbjct: 655 YIYNGHLQETMDCVWLMMHSNQMLDCCTFSIVLNACASVAALERGMEMHAFGIRSQLESD 714

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V+ ++L+ +YSKCG ++ A+K+F SM  K +  SW+SMIS Y   G    A+ +F EM 
Sbjct: 715 VVVESALLDMYSKCGRIDYASKVFNSMSQKNEF-SWNSMISGYARHGLGEKALEIFEEMQ 773

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G CP+   F +V+ ACS+   V  G   +  +   G         C +ID+  +    
Sbjct: 774 RNGACPDHVTFVSVLSACSHAGLVDRGLDYFEMMEDHGILPHIEHYSC-VIDLLGRAGKL 832

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQ------LGCPRDAIRLFLDM 274
           L+    +     + NT+ W  ++  C Q      +   ++A R+ L++
Sbjct: 833 LKIQEYINRMPMKPNTLIWRTVLVACRQSKDGDRIDLGKEASRMLLEL 880


>gi|356570253|ref|XP_003553304.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Glycine max]
          Length = 815

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/751 (35%), Positives = 444/751 (59%), Gaps = 8/751 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N++I  Y K G+L+ A  +F SM  +R +V+W+ +I  Y    + ++A ++F +M
Sbjct: 72  NVISTNTMIMGYLKSGNLSTARSLFDSMV-QRSVVTWTMLIGGYAQHNRFLEAFNLFADM 130

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+    + ++   +  E+V     ++G ++K GY DS + V  +L+D + K + 
Sbjct: 131 CRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGY-DSTLMVCNSLLDSYCK-TR 188

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A  +F  M EK+ V +  ++T  ++ G   DAI LF  M   GF P  FT + V++
Sbjct: 189 SLGLACHLFKHMAEKDNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLT 248

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A  +++    G+Q+HS+ ++     +V V  +L+D Y+K      + ++RK+F  M + +
Sbjct: 249 AGIQMDDIEFGQQVHSFVVKCNFVWNVFVANALLDFYSK---HDRIVEARKLFYEMPEVD 305

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            +S+  +IT    +G R +E+++LF ++   +     F FA++L    N L+  +  Q++
Sbjct: 306 GISYNVLITCCAWNG-RVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIH 364

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
           + A+      +  VGNSL+ MYA+  +  +A + F  L  ++ V +  ++  Y +    E
Sbjct: 365 SQAIVTDAISEVLVGNSLVDMYAKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHE 424

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
              +L  E+    +G  + T+AS+L   +++ ++  G+Q+H+RII+SG  SN    +AL+
Sbjct: 425 DGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSALV 484

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C +++ A Q+F+EM  RN +SW ++I+ +A++G    AL  F +M+  G++PN +
Sbjct: 485 DMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPNSV 544

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           +++++L ACSH GL+ EG ++F SM   + +  R EHYA MVD+L RSG   EA + +  
Sbjct: 545 SFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLMAR 604

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE-QDPQDPAAHILLSNLYASAGHWEY 710
           MP   D ++W + L +CR+H + EL   AA+ +   +  +D A ++ +SN+YA+AG W+ 
Sbjct: 605 MPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDS 664

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V  ++K ++ER + K    SW+E   K H F   +TSHP+T EI  +LD+L  +++E GY
Sbjct: 665 VGKVKKALRERGIRKVPAYSWVEIKQKTHVFSANDTSHPQTKEITRKLDELEKQMEEQGY 724

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
            PD+   LH ++EE KV+ L  HSE+IA+AF LIST K  PI V KNLR C DCH AIK 
Sbjct: 725 KPDSTCALHNVDEEVKVESLKYHSERIAIAFALISTPKGSPILVMKNLRACNDCHAAIKV 784

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS +  REI +RDS+RFHH  DG CSC DYW
Sbjct: 785 ISKIVNREITVRDSSRFHHFTDGSCSCKDYW 815



 Score =  222 bits (565), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 146/518 (28%), Positives = 274/518 (52%), Gaps = 12/518 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  PD  T + LL       + +    VH  + +   +   ++ NSL+  Y K   
Sbjct: 130 MCRHGMVPDHITLATLLSGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRS 189

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A  +FK M  K D V+++++++ Y   G   DAI++F +M +LGF P+E+ F+AV+ 
Sbjct: 190 LGLACHLFKHMAEK-DNVTFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLT 248

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           A    +++  G  ++ F++KC  F  +V V  AL+D + K    +E A K+F +M E + 
Sbjct: 249 AGIQMDDIEFGQQVHSFVVKCN-FVWNVFVANALLDFYSKHDRIVE-ARKLFYEMPEVDG 306

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           + + ++IT C   G   +++ LF ++  + F   +F  + ++S  +       G+Q+HS 
Sbjct: 307 ISYNVLITCCAWNGRVEESLELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQ 366

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           AI T    +V VG SLVDMYAKC   G   ++ ++F  +   + + WTA+I+GYVQ G  
Sbjct: 367 AIVTDAISEVLVGNSLVDMYAKCDKFG---EANRIFADLAHQSSVPWTALISGYVQKGLH 423

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           + + +KLF +M + ++  +  T+AS+L+AC NL    + +Q+++  ++ G   +   G++
Sbjct: 424 E-DGLKLFVEMHRAKIGADSATYASILRACANLASLTLGKQLHSRIIRSGCLSNVFSGSA 482

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L+ MYA+ G +++A + F+ +  +N VS+N ++ AYA+N +   A     ++  +G+  +
Sbjct: 483 LVDMYAKCGSIKEALQMFQEMPVRNSVSWNALISAYAQNGDGGHALRSFEQMIHSGLQPN 542

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVF 547
           + +F S+L   S  G + +G Q    + +    E     Y +++ M  R    + A ++ 
Sbjct: 543 SVSFLSILCACSHCGLVEEGLQYFNSMTQVYKLEPRREHYASMVDMLCRSGRFDEAEKLM 602

Query: 548 KEME-DRNVISWTSMITGFAKHG---FAARALEIFYKM 581
             M  + + I W+S++     H     A +A +  + M
Sbjct: 603 ARMPFEPDEIMWSSILNSCRIHKNQELAIKAADQLFNM 640



 Score =  196 bits (498), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 140/506 (27%), Positives = 245/506 (48%), Gaps = 42/506 (8%)

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN------------------ 247
           ++K G FD + C     +   ++   DL +A K+FD+M  KN                  
Sbjct: 33  MIKTG-FDPNTCRFNFQVQTHLQRG-DLGAARKLFDEMPHKNVISTNTMIMGYLKSGNLS 90

Query: 248 -------------TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
                         V WT++I    Q     +A  LF DM   G +PD  TL+ ++S  +
Sbjct: 91  TARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLLSGFT 150

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           E E      Q+H   ++ G    + V  SL+D Y K     S+  +  +F  M + + ++
Sbjct: 151 EFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTR---SLGLACHLFKHMAEKDNVT 207

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           + A++TGY + G  + +A+ LF  M      P+ FTFA+VL A   + D    +QV++  
Sbjct: 208 FNALLTGYSKEGF-NHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFV 266

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           VK     +  V N+L+  Y++  R+ +ARK F  + E + +SYN ++   A N   E++ 
Sbjct: 267 VKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMPEVDGISYNVLITCCAWNGRVEESL 326

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           EL  E++ T      + FA+LLS A++   +  G QIH++ I +   S   + N+L+ MY
Sbjct: 327 ELFRELQFTRFDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAISEVLVGNSLVDMY 386

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C     A ++F ++  ++ + WT++I+G+ + G     L++F +M    I  +  TY 
Sbjct: 387 AKCDKFGEANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYA 446

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L AC++   ++ G K   S     G +  +   + +VD+  + GS+ EAL+  + MP+
Sbjct: 447 SILRACANLASLTLG-KQLHSRIIRSGCLSNVFSGSALVDMYAKCGSIKEALQMFQEMPV 505

Query: 655 SADVLVWRTFLGACRVHGDTELGKHA 680
              V  W   + A   +GD   G HA
Sbjct: 506 RNSV-SWNALISAYAQNGD---GGHA 527



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 128/463 (27%), Positives = 231/463 (49%), Gaps = 24/463 (5%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G    AI     M   G  P   T++ +L + I+  +   G+ VHS + +     N  +
Sbjct: 218 EGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFGQQVHSFVVKCNFVWNVFV 277

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+  YSK   + EA K+F  M  + D +S++ +I+     G+  +++ +F E+    
Sbjct: 278 ANALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCCAWNGRVEESLELFRELQFTR 336

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           F   ++ F+ ++   +N+ N+ +G  I+   +      S+V VG +L+DM+ K       
Sbjct: 337 FDRRQFPFATLLSIAANSLNLEMGRQIHSQAIVTDAI-SEVLVGNSLVDMYAKCD-KFGE 394

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++F  +  +++V WT +I+   Q G   D ++LF++M  +    D  T + ++ AC+ 
Sbjct: 395 ANRIFADLAHQSSVPWTALISGYVQKGLHEDGLKLFVEMHRAKIGADSATYASILRACAN 454

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L   T GKQLHS  IR+G   +V  G +LVDMYAKC   GS+ ++ ++F  M   N +SW
Sbjct: 455 LASLTLGKQLHSRIIRSGCLSNVFSGSALVDMYAKC---GSIKEALQMFQEMPVRNSVSW 511

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN-------LLDSNVAE 408
            A+I+ Y Q+G     A++ F  MI   + PN  +F S+L AC +       L   N   
Sbjct: 512 NALISAYAQNGD-GGHALRSFEQMIHSGLQPNSVSFLSILCACSHCGLVEEGLQYFNSMT 570

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN 467
           QVY    +R          S++ M  RSGR ++A K    + FE + + +++++++   +
Sbjct: 571 QVYKLEPRREHYA------SMVDMLCRSGRFDEAEKLMARMPFEPDEIMWSSILNSCRIH 624

Query: 468 LNSE---KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            N E   KA + L  ++         + +++ + A    ++GK
Sbjct: 625 KNQELAIKAADQLFNMKGLRDAAPYVSMSNIYAAAGEWDSVGK 667



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 71/299 (23%), Positives = 136/299 (45%), Gaps = 33/299 (11%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK- 466
           + V    +K G   + C  N  +  + + G +  ARK F+ +  KN++S NTM+  Y K 
Sbjct: 27  QHVDASMIKTGFDPNTCRFNFQVQTHLQRGDLGAARKLFDEMPHKNVISTNTMIMGYLKS 86

Query: 467 -NLNSEK-----------------------------AFELLHEIEDTGVGTSAYTFASLL 496
            NL++ +                             AF L  ++   G+     T A+LL
Sbjct: 87  GNLSTARSLFDSMVQRSVVTWTMLIGGYAQHNRFLEAFNLFADMCRHGMVPDHITLATLL 146

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           SG +   ++ +  Q+H  ++K G++S   + N+L+  Y +  ++  A  +FK M +++ +
Sbjct: 147 SGFTEFESVNEVAQVHGHVVKVGYDSTLMVCNSLLDSYCKTRSLGLACHLFKHMAEKDNV 206

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           ++ +++TG++K GF   A+ +F+KM   G +P+  T+ AVL+A      I  G +   S 
Sbjct: 207 TFNALLTGYSKEGFNHDAINLFFKMQDLGFRPSEFTFAAVLTAGIQMDDIEFG-QQVHSF 265

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
             +   V  +     ++D   +   + EA +    MP   D + +   +  C  +G  E
Sbjct: 266 VVKCNFVWNVFVANALLDFYSKHDRIVEARKLFYEMP-EVDGISYNVLITCCAWNGRVE 323


>gi|449449306|ref|XP_004142406.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Cucumis sativus]
          Length = 782

 Score =  517 bits (1331), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 268/695 (38%), Positives = 407/695 (58%), Gaps = 68/695 (9%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           + E + ++  +M + + V WT +I    Q G   +AI +F  MI     P +FT+S V+S
Sbjct: 91  NFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLS 150

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +C+  +    G+++HS+ ++ GL   V V  SL++MYAKC   G    ++ VFDRM   N
Sbjct: 151 SCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKC---GDPVIAKVVFDRMTVKN 207

Query: 352 VMSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMI- 380
           + +W A+I+ Y+QSG                              G + EA+ +FS M+ 
Sbjct: 208 ISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLN 267

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +  + P++FT AS+L AC NL   N+ +Q++ + ++        VGN+LISMYA+SG +E
Sbjct: 268 EPSLKPDNFTLASILSACANLEKLNIGKQIHAYILRAETETSGAVGNALISMYAKSGGVE 327

Query: 441 ---------------------------------DARKAFESLFEKNLVSYNTMVDAYAKN 467
                                             AR+ F  L ++++V++  M+  Y +N
Sbjct: 328 IARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQN 387

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
                A EL   + + G   ++YT A++LS +SS+  +  G+QIHA  IK+G  S   + 
Sbjct: 388 GLWNDALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVT 447

Query: 528 NALISMYSRCANVEAAFQVFK-EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           NALI+MY++  N+  A +VF      + ++SWTSMI   A+HG    A+ +F +ML+ G+
Sbjct: 448 NALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTSMIMALAQHGLGKEAINLFERMLSVGM 507

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+ ITY+ VLSAC+H GL+ +G K++  M + H I   + HYACM+DL GR+G L EA 
Sbjct: 508 KPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAY 567

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            FI SMP+  D + W + L +C++H + +L K AAE +L  DP +  A++ L+N+Y++ G
Sbjct: 568 LFIESMPIEPDNIAWGSLLASCKIHKNADLAKVAAERLLLIDPGNSGAYLALANVYSACG 627

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE  A  RK MK+R + KE G SWI   N+VH F V +  HP+  EIY  + ++  +IK
Sbjct: 628 KWENAAQTRKLMKDRGVRKEKGISWIHIKNEVHAFGVEDVIHPQKDEIYKLMAEIWEEIK 687

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           + G++PDT  VLH+LEEE K Q L  HSEK+A+AFGL++T ++  +R+ KNLRVC DCH+
Sbjct: 688 KMGFIPDTESVLHDLEEEVKEQILKYHSEKLAIAFGLLNTPENTALRIMKNLRVCNDCHS 747

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK+IS + GREI++RD+ RFHH KDG CSC DYW
Sbjct: 748 AIKFISKLVGREIIVRDATRFHHFKDGSCSCRDYW 782



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 164/627 (26%), Positives = 295/627 (47%), Gaps = 103/627 (16%)

Query: 73  GNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           GN P   + ++ +L++ +R ++   G+ VH  + +  L     ++N+L++ Y+K G L  
Sbjct: 4   GNSPTSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRF 63

Query: 132 ANKIFKSM------------------GN----KR--------DIVSWSSMISSYVNRGKQ 161
           A+ +F  M                  GN    +R        D VSW+++I  Y   G  
Sbjct: 64  AHHVFDEMPLKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
            +AI MF +M+     P+++  S V+ +C+  + + IG  I+ F++K G   S V V  +
Sbjct: 124 DNAIWMFAKMISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLG-LGSCVPVATS 182

Query: 222 LIDMFVK------------------------------GSVDLESAYKVFDKMTEKNTVGW 251
           L++M+ K                               S   E A   F+KM +++ V W
Sbjct: 183 LLNMYAKCGDPVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSW 242

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAI 310
             MI+  +Q G   +A+ +F  M+    L PD FTL+ ++SAC+ LE    GKQ+H++ +
Sbjct: 243 NSMISGYSQQGYNLEALVIFSKMLNEPSLKPDNFTLASILSACANLEKLNIGKQIHAYIL 302

Query: 311 RTGLALDVCVGCSLVDMYAKC------------------------------TVDGSVDDS 340
           R        VG +L+ MYAK                               T  G+V  +
Sbjct: 303 RAETETSGAVGNALISMYAKSGGVEIARLIVEHNRTSNLNIIAFTSLLDGYTKLGNVKPA 362

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R++F+++ D +V++WTA+I GYVQ+G  + +A++LF  M+     PN +T A++L    +
Sbjct: 363 REIFNKLRDRDVVAWTAMIVGYVQNGLWN-DALELFRLMVNEGPEPNSYTLAAMLSVSSS 421

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE-SLFEKNLVSYNT 459
           L      +Q++  A+K G +    V N+LI+MYA++G +  A++ F+    +K +VS+ +
Sbjct: 422 LTILEHGKQIHASAIKAGESSTPSVTNALIAMYAKTGNINVAKRVFDLPNGKKEIVSWTS 481

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-S 518
           M+ A A++   ++A  L   +   G+     T+  +LS  + +G + +G + +  + +  
Sbjct: 482 MIMALAQHGLGKEAINLFERMLSVGMKPDHITYVGVLSACTHVGLVEQGRKYYNMMTEVH 541

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEI 577
             E     Y  +I +Y R   ++ A+   + M  + + I+W S++     H  A  A   
Sbjct: 542 EIEPTLSHYACMIDLYGRAGLLQEAYLFIESMPIEPDNIAWGSLLASCKIHKNADLAKVA 601

Query: 578 FYKMLADGIKP-NGITYIA---VLSAC 600
             ++L   I P N   Y+A   V SAC
Sbjct: 602 AERLLL--IDPGNSGAYLALANVYSAC 626



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 162/605 (26%), Positives = 258/605 (42%), Gaps = 138/605 (22%)

Query: 46  LSNRLIYHLND----------------GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           +S RL+Y + D                G    AI+    M  +   P   T S +L SC 
Sbjct: 94  VSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAKMISERVPPSQFTVSNVLSSCA 153

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK------- 142
            ++   +G+ +HS + +  L     +  SL+++Y+KCGD   A  +F  M  K       
Sbjct: 154 ANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNA 213

Query: 143 -----------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCP 178
                                  RDIVSW+SMIS Y  +G  ++A+ +F +ML E    P
Sbjct: 214 LISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQGYNLEALVIFSKMLNEPSLKP 273

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL---- 233
           + +  ++++ AC+N E + IG  I+ ++L+    ++   VG ALI M+ K G V++    
Sbjct: 274 DNFTLASILSACANLEKLNIGKQIHAYILRAET-ETSGAVGNALISMYAKSGGVEIARLI 332

Query: 234 ---------------------------ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
                                      + A ++F+K+ +++ V WT MI    Q G   D
Sbjct: 333 VEHNRTSNLNIIAFTSLLDGYTKLGNVKPAREIFNKLRDRDVVAWTAMIVGYVQNGLWND 392

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+ LF  M+  G  P+ +TL+ ++S  S L +   GKQ+H+ AI+ G +    V  +L+ 
Sbjct: 393 ALELFRLMVNEGPEPNSYTLAAMLSVSSSLTILEHGKQIHASAIKAGESSTPSVTNALIA 452

Query: 327 MYAKCTVDGSVDDSRKVFD-RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           MYAK    G+++ +++VFD       ++SWT++I    Q  G  KEA+ LF  M+   + 
Sbjct: 453 MYAKT---GNINVAKRVFDLPNGKKEIVSWTSMIMALAQH-GLGKEAINLFERMLSVGMK 508

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+H T+  VL AC             TH                       G +E  RK 
Sbjct: 509 PDHITYVGVLSAC-------------THV----------------------GLVEQGRKY 533

Query: 446 FESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +  +      E  L  Y  M+D Y +    ++A+     IE   +      + SLL+   
Sbjct: 534 YNMMTEVHEIEPTLSHYACMIDLYGRAGLLQEAYLF---IESMPIEPDNIAWGSLLASCK 590

Query: 501 --SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV--- 555
                 + K       +I  G   N   Y AL ++YS C   E A Q  K M+DR V   
Sbjct: 591 IHKNADLAKVAAERLLLIDPG---NSGAYLALANVYSACGKWENAAQTRKLMKDRGVRKE 647

Query: 556 --ISW 558
             ISW
Sbjct: 648 KGISW 652



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 73/275 (26%), Positives = 126/275 (45%), Gaps = 63/275 (22%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FA +L+    + D      V+   +K+G  L   + N+L++ YA++G +  A   F+ + 
Sbjct: 13  FAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHVFDEMP 72

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-------------------------- 484
            K+  S+NT++  YAK  N E +  LL+E+ D                            
Sbjct: 73  LKSTFSWNTLISGYAKQGNFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLFDNAIWMFAK 132

Query: 485 -----VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES----------------- 522
                V  S +T +++LS  ++   +  G +IH+ ++K G  S                 
Sbjct: 133 MISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVPVATSLLNMYAKCGD 192

Query: 523 --------------NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
                         N   +NALIS+Y +    E A   F++M DR+++SW SMI+G+++ 
Sbjct: 193 PVIAKVVFDRMTVKNISTWNALISLYMQSGQFELAASQFEKMPDRDIVSWNSMISGYSQQ 252

Query: 569 GFAARALEIFYKMLAD-GIKPNGITYIAVLSACSH 602
           G+   AL IF KML +  +KP+  T  ++LSAC++
Sbjct: 253 GYNLEALVIFSKMLNEPSLKPDNFTLASILSACAN 287



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/245 (22%), Positives = 110/245 (44%), Gaps = 19/245 (7%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           TS+  FA +L  +  I     G  +H +IIK G      + N L++ Y++  ++  A  V
Sbjct: 8   TSSEFFAHILQTSVRIKDPFAGRSVHCQIIKKGLHLGVYLMNNLMTFYAKTGSLRFAHHV 67

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F EM  ++  SW ++I+G+AK G      E+  ++L +    + +++ A++   +  GL 
Sbjct: 68  FDEMPLKSTFSWNTLISGYAKQG----NFEVSRRLLYEMPDCDPVSWTAIIVGYNQFGLF 123

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE-------FIRSMPLSADVL 659
                 F  M     I +R+      V  +  S +  + L+       F+  + L + V 
Sbjct: 124 DNAIWMFAKM-----ISERVPPSQFTVSNVLSSCAANQTLDIGRKIHSFVVKLGLGSCVP 178

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           V  + L      GD  + K   + +  ++     A   L +LY  +G +E  A+  ++M 
Sbjct: 179 VATSLLNMYAKCGDPVIAKVVFDRMTVKNISTWNA---LISLYMQSGQFELAASQFEKMP 235

Query: 720 ERNLI 724
           +R+++
Sbjct: 236 DRDIV 240


>gi|224135349|ref|XP_002322051.1| predicted protein [Populus trichocarpa]
 gi|222869047|gb|EEF06178.1| predicted protein [Populus trichocarpa]
          Length = 924

 Score =  516 bits (1330), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 281/799 (35%), Positives = 450/799 (56%), Gaps = 11/799 (1%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           +DL++     PD  T+  ++K+C    +  LG+++H ++ +  L  +  + N+L+ +Y K
Sbjct: 134 MDLVSDTDFQPDNFTFPSVIKACGGILDVRLGEVIHGMVIKMGLVLDVFVGNALVGMYGK 193

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFS 184
           CG ++EA K+F  M  + ++VSW+SMI ++   G   D+  + +EML E G  P+     
Sbjct: 194 CGAVDEAMKVFDFM-PETNLVSWNSMICAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVV 252

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            ++  C+    V IG  I+G  +K G    +V V  A++ M+ K    L  A   F K  
Sbjct: 253 TILPVCAGEGEVDIGMGIHGLAVKLG-LSEEVMVNNAMVYMYSKCGY-LNEAQMSFVKNN 310

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELFTSG 302
            KN V W  MI+  +  G   +A  L  +M + G     +  T+  V+ AC +     S 
Sbjct: 311 NKNVVSWNTMISAFSLEGDVNEAFNLLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSL 370

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K+LH ++ R      V +  + +  YAKC   G+++ + KVF  + D  V SW A+I G+
Sbjct: 371 KELHGYSFRHCFQ-HVELSNAFILAYAKC---GALNSAEKVFHGIGDKTVSSWNALIGGH 426

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q+G   K    LF     GQ  P+ FT +S+L AC +L      ++++ + ++ G   D
Sbjct: 427 AQNGDPRKALHLLFQMTYSGQ-QPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETD 485

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             VG SL+S Y   G+   AR  F+ + +KNLVS+N M+  Y++N    ++  L  +   
Sbjct: 486 FFVGTSLLSHYIHCGKASSARVLFDRMKDKNLVSWNAMISGYSQNGLPYESLALFRKSLS 545

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G+ +      S+    S + A+  G++ H  ++K+    +  +  ++I MY++   ++ 
Sbjct: 546 EGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKE 605

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           + +VF  ++D+NV SW ++I     HG    A+E++ +M   G  P+  TYI +L AC H
Sbjct: 606 SRKVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMACGH 665

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGL+ EG K+F+ M + + I  ++EHYAC++D+L R+G L +AL  +  MP  AD  +W 
Sbjct: 666 AGLVEEGLKYFKEMQNFNLIEPKLEHYACLIDMLARAGRLDDALRLVNEMPEEADNRIWS 725

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
           + L +CR  G  E+G+  A+ +LE +P     ++LLSNLYA  G W+ V  +R+ MKE  
Sbjct: 726 SLLRSCRTFGALEIGEKVAKKLLELEPDKAENYVLLSNLYAGLGKWDGVRRVRQMMKEIG 785

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           L K+AGCSWIE   +V+ F VG++  PK+ EI     +L  +I E GY P+T+ VLHE+ 
Sbjct: 786 LQKDAGCSWIEVGGRVYSFVVGDSLQPKSAEIRVIWRRLEERISEIGYKPNTSSVLHEVG 845

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE+K+  L  HSEK+A++FGL+ T+K   +R++KNLR+C DCH A K IS    REIV+R
Sbjct: 846 EEEKIDILRGHSEKLAISFGLLKTTKGTTLRIYKNLRICADCHNAAKLISKAVEREIVVR 905

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+ RFHH +DG CSC DYW
Sbjct: 906 DNKRFHHFRDGLCSCCDYW 924



 Score =  276 bits (706), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 188/663 (28%), Positives = 349/663 (52%), Gaps = 36/663 (5%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSKCGDLNEANKIFK 137
           +   LLL++C   ++   G+ +H  ++ S    N  +LN+ LI +Y+ CG   ++  +F 
Sbjct: 44  EAIGLLLQACGNQKDIETGRRLHKFVSDSTHYRNDYVLNTRLIKMYAMCGSPLDSRLVFD 103

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENV 196
           +M  K +++ W++++S Y   G   D + +F++++ +  F P+ + F +VI+AC    +V
Sbjct: 104 NMETK-NLIQWNALVSGYTRNGLYGDVVKVFMDLVSDTDFQPDNFTFPSVIKACGGILDV 162

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMI 255
            +G +I+G ++K G    DV VG AL+ M+ K G+VD   A KVFD M E N V W  MI
Sbjct: 163 RLGEVIHGMVIKMGLV-LDVFVGNALVGMYGKCGAVD--EAMKVFDFMPETNLVSWNSMI 219

Query: 256 TRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
              ++ G  RD+  L ++M+   G LPD  T+  ++  C+       G  +H  A++ GL
Sbjct: 220 CAFSENGFSRDSFDLLMEMLGEEGLLPDVVTVVTILPVCAGEGEVDIGMGIHGLAVKLGL 279

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           + +V V  ++V MY+KC   G +++++  F +  + NV+SW  +I+ +   G  + EA  
Sbjct: 280 SEEVMVNNAMVYMYSKC---GYLNEAQMSFVKNNNKNVVSWNTMISAFSLEGDVN-EAFN 335

Query: 375 LFSDM-IQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           L  +M IQG ++  N  T  +VL AC + L     ++++ ++ +      + + N+ I  
Sbjct: 336 LLQEMQIQGEEMKANEVTILNVLPACLDKLQLRSLKELHGYSFRHCFQHVE-LSNAFILA 394

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+ G +  A K F  + +K + S+N ++  +A+N +  KA  LL ++  +G     +T 
Sbjct: 395 YAKCGALNSAEKVFHGIGDKTVSSWNALIGGHAQNGDPRKALHLLFQMTYSGQQPDWFTI 454

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +SLL   + + ++  G++IH  ++++G E++  +  +L+S Y  C    +A  +F  M+D
Sbjct: 455 SSLLLACAHLKSLQYGKEIHGYVLRNGLETDFFVGTSLLSHYIHCGKASSARVLFDRMKD 514

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           +N++SW +MI+G++++G    +L +F K L++GI+ + I  ++V  ACS    +  G   
Sbjct: 515 KNLVSWNAMISGYSQNGLPYESLALFRKSLSEGIQSHEIAIVSVFGACSQLSALRLG--- 571

Query: 613 FRSMYDEHGIVQRM-----EHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
                + HG V +          C ++D+  +SG + E+ +    +    +V  W   + 
Sbjct: 572 ----KEAHGYVLKALQTEDAFVGCSIIDMYAKSGCIKESRKVFDGLK-DKNVASWNAIIV 626

Query: 667 ACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYA--SAGHWEYVANIRKRMKERN 722
           A  +HG    GK A E+   +++  Q P     +  L A   AG  E      K M+  N
Sbjct: 627 AHGIHGH---GKEAIELYERMKKVGQMPDRFTYIGILMACGHAGLVEEGLKYFKEMQNFN 683

Query: 723 LIK 725
           LI+
Sbjct: 684 LIE 686



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/300 (32%), Positives = 151/300 (50%), Gaps = 15/300 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H  +G  +KA+  L  MT  G  PD  T S LL +C   ++   GK +H  + R+ LE +
Sbjct: 426 HAQNGDPRKALHLLFQMTYSGQQPDWFTISSLLLACAHLKSLQYGKEIHGYVLRNGLETD 485

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  SL+S Y  CG  + A  +F  M +K ++VSW++MIS Y   G   +++ +F + L
Sbjct: 486 FFVGTSLLSHYIHCGKASSARVLFDRMKDK-NLVSWNAMISGYSQNGLPYESLALFRKSL 544

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   +E    +V  ACS    + +G   +G++LK      D  VGC++IDM+ K    
Sbjct: 545 SEGIQSHEIAIVSVFGACSQLSALRLGKEAHGYVLK-ALQTEDAFVGCSIIDMYAKSGCI 603

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            ES  KVFD + +KN   W  +I      G  ++AI L+  M   G +PDRFT  G++ A
Sbjct: 604 KESR-KVFDGLKDKNVASWNAIIVAHGIHGHGKEAIELYERMKKVGQMPDRFTYIGILMA 662

Query: 293 CSELELFTSG----KQLHSW-AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           C    L   G    K++ ++  I   L    C    L+DM A+    G +DD+ ++ + M
Sbjct: 663 CGHAGLVEEGLKYFKEMQNFNLIEPKLEHYAC----LIDMLARA---GRLDDALRLVNEM 715


>gi|359488559|ref|XP_002275581.2| PREDICTED: pentatricopeptide repeat-containing protein At3g26782,
           mitochondrial-like [Vitis vinifera]
          Length = 735

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 259/633 (40%), Positives = 392/633 (61%), Gaps = 14/633 (2%)

Query: 239 VFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F+K  +K N   W  +I    + G   +A+R F  M      P+R T    + +CS L 
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SG+Q H  A+  G   D+ V  +LVDMY+KC   G + D+R +FD +   N++SWT+
Sbjct: 167 DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKC---GELRDARTLFDEISHRNIVSWTS 223

Query: 358 IITGYVQSGGRDKEAVKLFSDMI--------QGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           +ITGYVQ+    + A+ LF + +         G+V  +     SVL AC  + + ++ E 
Sbjct: 224 MITGYVQNDDAHR-ALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEG 282

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+   +KRG   D  V N+L+  YA+ G +  +R+ F+ + E++++S+N+++  YA+N  
Sbjct: 283 VHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMAERDVISWNSIIAVYAQNGM 342

Query: 470 SEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           S ++ E+ H  ++D  +  +A T +++L   +  G+   G+ IH ++IK G ESN  +  
Sbjct: 343 STESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGT 402

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ++I MY +C  VE A + F  M ++NV SW++M+ G+  HG A  ALE+FY+M   G+KP
Sbjct: 403 SIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKP 462

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N IT+++VL+ACSHAGL+ EGW  F++M  E  +   +EHY CMVDLLGR+G L EA + 
Sbjct: 463 NYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDL 522

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ M L  D +VW   LGACR+H + +LG+ +A  + E DP++   ++LLSN+YA AG W
Sbjct: 523 IKGMKLRPDFVVWGALLGACRMHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRW 582

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           E V  +R  MK   L+K  G S ++   +VH F VG+  HP+  +IY  L++L++K++E 
Sbjct: 583 EDVERMRILMKNSGLVKPPGFSLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEV 642

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+PD   VLH++  E+K   L  HSEK+AVAFG+++T     I + KNLRVCGDCHTAI
Sbjct: 643 GYVPDMTSVLHDVGHEEKEMVLRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAI 702

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS +  REIV+RDS RFHH +DG CSC DYW
Sbjct: 703 KFISKIVDREIVVRDSKRFHHFRDGLCSCGDYW 735



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 234/449 (52%), Gaps = 25/449 (5%)

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F    +K ++ SW+S+I+     G  V+A+  F  M +L   PN   F   I++CS   
Sbjct: 107 LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 166

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G   +   L  G F+ D+ V  AL+DM+ K   +L  A  +FD+++ +N V WT M
Sbjct: 167 DLHSGRQAHQQALIFG-FEPDLFVSSALVDMYSKCG-ELRDARTLFDEISHRNIVSWTSM 224

Query: 255 ITRCTQLGCPRDAIRLFLDMIL--SG------FLPDRFTLSGVVSACSELELFTSGKQLH 306
           IT   Q      A+ LF + ++  SG         D   +  V+SACS +   +  + +H
Sbjct: 225 ITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVLSACSRVSEKSITEGVH 284

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            + I+ G   D+ V  +L+D YAKC   G +  SR+VFD M + +V+SW +II  Y Q+ 
Sbjct: 285 GFLIKRGFEGDLGVENTLMDAYAKC---GELGVSRRVFDGMAERDVISWNSIIAVYAQN- 340

Query: 367 GRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G   E++++F  M++ G++  N  T ++VL AC +     + + ++   +K G   +  V
Sbjct: 341 GMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFV 400

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
           G S+I MY + G++E ARKAF+ + EKN+ S++ MV  Y  + ++++A E+ +E+   GV
Sbjct: 401 GTSIIDMYCKCGKVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGV 460

Query: 486 GTSAYTFASLLSGASSIGAIGKG-----EQIHARIIKSGFESNHCIYNALISMYSRCANV 540
             +  TF S+L+  S  G + +G        H   ++ G E     Y  ++ +  R   +
Sbjct: 461 KPNYITFVSVLAACSHAGLLEEGWHWFKAMSHEFDVEPGVEH----YGCMVDLLGRAGYL 516

Query: 541 EAAFQVFKEMEDR-NVISWTSMITGFAKH 568
           + AF + K M+ R + + W +++     H
Sbjct: 517 KEAFDLIKGMKLRPDFVVWGALLGACRMH 545



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/334 (35%), Positives = 182/334 (54%), Gaps = 16/334 (4%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+   +KSC    + H G+  H        EP+  + ++L+ +YSKCG+L +A  +
Sbjct: 150 PNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTL 209

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELG------FCPNEYCFSAVI 187
           F  + + R+IVSW+SMI+ YV       A+ +F E L  E G       C +     +V+
Sbjct: 210 FDEISH-RNIVSWTSMITGYVQNDDAHRALLLFKEFLVEESGSEGDGEVCVDPIAMVSVL 268

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            ACS     +I   ++GFL+K G F+ D+ V   L+D + K   +L  + +VFD M E++
Sbjct: 269 SACSRVSEKSITEGVHGFLIKRG-FEGDLGVENTLMDAYAKCG-ELGVSRRVFDGMAERD 326

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLH 306
            + W  +I    Q G   +++ +F  M+  G +  +  TLS V+ AC+       GK +H
Sbjct: 327 VISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIH 386

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
              I+ GL  +V VG S++DMY KC   G V+ +RK FDRM + NV SW+A++ GY    
Sbjct: 387 DQVIKMGLESNVFVGTSIIDMYCKC---GKVEMARKAFDRMREKNVKSWSAMVAGYGMH- 442

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           G  KEA+++F +M    V PN+ TF SVL AC +
Sbjct: 443 GHAKEALEVFYEMNMAGVKPNYITFVSVLAACSH 476



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 173/365 (47%), Gaps = 48/365 (13%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L +C R     + + VH  L +   E +  + N+L+  Y+KCG+L  + ++F  M  +R
Sbjct: 267 VLSACSRVSEKSITEGVHGFLIKRGFEGDLGVENTLMDAYAKCGELGVSRRVFDGMA-ER 325

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHII 202
           D++SW+S+I+ Y   G   +++ +F  M++ G    N    SAV+ AC+++ +  +G  I
Sbjct: 326 DVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCI 385

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  ++K G  +S+V VG ++IDM+ K    +E A K FD+M EKN   W+ M+      G
Sbjct: 386 HDQVIKMG-LESNVFVGTSIIDMYCKCG-KVEMARKAFDRMREKNVKSWSAMVAGYGMHG 443

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             ++A+ +F +M ++G  P+  T   V++ACS   L   G     W        DV  G 
Sbjct: 444 HAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEGWH---WFKAMSHEFDVEPG- 499

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
             V+ Y  C VD                            +   G  KEA  L   M   
Sbjct: 500 --VEHYG-CMVD---------------------------LLGRAGYLKEAFDLIKGM--- 526

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD--DCVGNSLIS-MYARSGRM 439
           ++ P+   + ++L AC    + ++ E     + ++   LD  +C    L+S +YA +GR 
Sbjct: 527 KLRPDFVVWGALLGACRMHKNVDLGEI----SARKLFELDPKNCGYYVLLSNIYADAGRW 582

Query: 440 EDARK 444
           ED  +
Sbjct: 583 EDVER 587


>gi|413937268|gb|AFW71819.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 830

 Score =  516 bits (1328), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 284/781 (36%), Positives = 456/781 (58%), Gaps = 14/781 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFKSMGNK 142
           ++K C    +  LGK +H+L  R   +   + +  SL+ +Y     + +  K+F+ M  K
Sbjct: 61  IIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLDGRKVFEGM-LK 119

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R++V+W+S+++ Y+  G  +D + +F  M   G  PN + FS+V+   ++   V +G  +
Sbjct: 120 RNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVASQGMVDLGQHV 179

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +   +K G   S V V  +L++M+ K  + +E A  VF +M  ++ V W  ++      G
Sbjct: 180 HAQSIKFGCC-STVFVCNSLMNMYAKCGL-VEEARVVFCRMETRDMVSWNTLMAGLVLNG 237

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              +A++LF D   S  +    T S V++ C+ L+     +QLHS  ++ G      V  
Sbjct: 238 RDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMT 297

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
           +L+D Y K    G +D +  VF  M    NV+SWTA+I G +Q+G     A  LFS M +
Sbjct: 298 ALMDAYNKA---GQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDI-PLAAALFSRMRE 353

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             VAPN  T++++L     + +++   Q++   +K        VG +L+  Y++    E+
Sbjct: 354 DGVAPNDLTYSTIL----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVSYSKLCSTEE 409

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG-AS 500
           A   F+ + +K++VS++ M+  YA+  +   A     ++   G+  + +T +S +   AS
Sbjct: 410 ALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACAS 469

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
               +  G Q HA  IK       C+ +AL+SMY+R  ++E A  VF+   DR+++SW S
Sbjct: 470 PAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENAQCVFERQTDRDLLSWNS 529

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           M++G+A+HG++ +AL++F +M  +GI  +G+T+++V+  C+HAGL+ EG ++F  M  ++
Sbjct: 530 MLSGYAQHGYSQKALDVFRQMEVEGIDMDGLTFLSVIMGCAHAGLVEEGQQYFDLMVRDY 589

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI   M+HYACMVDL  R+G L E +  I  MP  A   +WR  LGACRVH + ELGK A
Sbjct: 590 GITPTMDHYACMVDLYSRAGKLDETMSLIEGMPFPAGPTIWRALLGACRVHKNVELGKLA 649

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE +L  +P D A ++LLSN+Y++AG W+    +RK M  + + KEAGCSWI+  NKVH 
Sbjct: 650 AEKLLSLEPLDSATYVLLSNIYSAAGKWKEKDEVRKLMDTKKVRKEAGCSWIQIKNKVHF 709

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F   + SHP + +IYA+L  +  K+K+ GY PDT+FV H++ E+QK   L  HSE++A+A
Sbjct: 710 FIASDKSHPLSEQIYAKLRAMTAKLKQEGYCPDTSFVPHDVAEDQKEAMLAMHSERLALA 769

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLI+T  + P+ +FKNLRV GD HT +K +S +  REIV+RD  RFHH K G CSC D+
Sbjct: 770 FGLIATPPAAPLHIFKNLRVSGDGHTVMKMVSEIEDREIVMRDCCRFHHFKSGVCSCGDF 829

Query: 861 W 861
           W
Sbjct: 830 W 830



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 141/502 (28%), Positives = 256/502 (50%), Gaps = 11/502 (2%)

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G C        +I+ C +  +  +G  ++   ++CG+   D+ VG +L+DM++     L+
Sbjct: 50  GRCVGGGALLGIIKICGSVPDRVLGKQLHALCVRCGHDHGDIRVGTSLVDMYMNWHSVLD 109

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
              KVF+ M ++N V WT ++T   Q G   D + LF  M   G  P+ FT S V+S  +
Sbjct: 110 -GRKVFEGMLKRNVVTWTSLLTGYIQAGVLLDVMSLFFRMRAEGVWPNPFTFSSVLSMVA 168

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              +   G+ +H+ +I+ G    V V  SL++MYAKC   G V+++R VF RM   +++S
Sbjct: 169 SQGMVDLGQHVHAQSIKFGCCSTVFVCNSLMNMYAKC---GLVEEARVVFCRMETRDMVS 225

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W  ++ G V + GRD EA++LF D           T+++V+  C NL    +A Q+++  
Sbjct: 226 WNTLMAGLVLN-GRDLEALQLFHDSRSSITMLTESTYSTVINLCANLKHLGLARQLHSSV 284

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKNLNSEKA 473
           +K G      V  +L+  Y ++G+++ A   F  +   +N+VS+  M+D   +N +   A
Sbjct: 285 LKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLMSGSQNVVSWTAMIDGCIQNGDIPLA 344

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L   + + GV  +  T++++L    ++       QIHA++IK+ +E    +  AL+  
Sbjct: 345 AALFSRMREDGVAPNDLTYSTIL----TVSEASFPPQIHAQVIKTNYECTPTVGTALMVS 400

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           YS+  + E A  +FK ++ ++V+SW++M+T +A+ G    A   F KM   G+KPN  T 
Sbjct: 401 YSKLCSTEEALSIFKMIDQKDVVSWSAMLTCYAQAGDCNGATNAFIKMTMHGLKPNEFTI 460

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            + + AC+      +  + F ++  +H     +   + +V +  R GS+  A + +    
Sbjct: 461 SSAIDACASPAAGVDLGRQFHAISIKHRCHDALCVSSALVSMYARKGSIENA-QCVFERQ 519

Query: 654 LSADVLVWRTFLGACRVHGDTE 675
              D+L W + L     HG ++
Sbjct: 520 TDRDLLSWNSMLSGYAQHGYSQ 541



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 185/375 (49%), Gaps = 18/375 (4%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TYS ++  C   ++  L + +HS + +        ++ +L+  Y+K G L++A  +F  M
Sbjct: 260 TYSTVINLCANLKHLGLARQLHSSVLKHGFHSYGNVMTALMDAYNKAGQLDKALDVFLLM 319

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
              +++VSW++MI   +  G    A  +F  M E G  PN+  +S ++         +  
Sbjct: 320 SGSQNVVSWTAMIDGCIQNGDIPLAAALFSRMREDGVAPNDLTYSTIL----TVSEASFP 375

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+  ++K  Y +    VG AL+  + K     E A  +F  + +K+ V W+ M+T   
Sbjct: 376 PQIHAQVIKTNY-ECTPTVGTALMVSYSK-LCSTEEALSIFKMIDQKDVVSWSAMLTCYA 433

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC-SELELFTSGKQLHSWAIRTGLALDV 318
           Q G    A   F+ M + G  P+ FT+S  + AC S       G+Q H+ +I+      +
Sbjct: 434 QAGDCNGATNAFIKMTMHGLKPNEFTISSAIDACASPAAGVDLGRQFHAISIKHRCHDAL 493

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
           CV  +LV MYA+    GS+++++ VF+R  D +++SW ++++GY Q G   K A+ +F  
Sbjct: 494 CVSSALVSMYAR---KGSIENAQCVFERQTDRDLLSWNSMLSGYAQHGYSQK-ALDVFRQ 549

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAE--QVYTHAVKRGRALDDCVGN--SLISMYA 434
           M    +  +  TF SV+  C +   + + E  Q Y   + R   +   + +   ++ +Y+
Sbjct: 550 MEVEGIDMDGLTFLSVIMGCAH---AGLVEEGQQYFDLMVRDYGITPTMDHYACMVDLYS 606

Query: 435 RSGRMEDARKAFESL 449
           R+G++++     E +
Sbjct: 607 RAGKLDETMSLIEGM 621


>gi|18483237|gb|AAL73981.1|AF466201_10 putative vegetative storage protein [Sorghum bicolor]
          Length = 779

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 281/740 (37%), Positives = 430/740 (58%), Gaps = 12/740 (1%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L  A ++F  +    D  +++++I +Y  RG    AI ++  ML     PN+Y F  V
Sbjct: 47  GQLALARQVFDRIPAP-DARAYNALIRAYSWRGPFHAAIDLYRSMLYFRVPPNKYTFPFV 105

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++ACS   ++  G  I+      G   +D+ V  ALID++++       A  VF KM  +
Sbjct: 106 LKACSALADLCAGRTIHAHAAAVG-LHTDLFVSTALIDLYIR-CARFGPAANVFAKMPMR 163

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQL 305
           + V W  M+      G    AI   LDM   G L P+  TL  ++   ++      G  +
Sbjct: 164 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSV 223

Query: 306 HSWAIRTGLALD---VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           H++ +R  L  +   V +G +L+DMYAKC     +  + +VF  M   N ++W+A+I G+
Sbjct: 224 HAYCLRAYLDQNEEQVLIGTALLDMYAKCK---HLVYACRVFHGMTVRNEVTWSALIGGF 280

Query: 363 VQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           V    R  EA  LF DM ++G    +  + AS L+ C +L D  +  Q++    K G   
Sbjct: 281 VLCD-RMTEAFNLFKDMLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSGIHA 339

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D   GNSL+SMYA++G + +A   F+ +  K+ +SY  ++  Y +N  +E+AF +  +++
Sbjct: 340 DLTAGNSLLSMYAKAGLINEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQ 399

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              V     T  SL+   S + A+  G   H  +I  G      I N+LI MY++C  ++
Sbjct: 400 ACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKCGRID 459

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            + QVF +M  R+++SW +MI G+  HG    A  +F  M   G +P+ +T+I +++ACS
Sbjct: 460 LSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACS 519

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+GL++EG   F +M  ++GI+ RMEHY CMVDLL R G L EA +FI+SMPL ADV VW
Sbjct: 520 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQSMPLKADVRVW 579

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              LGACR+H + +LGK  + MI +  P+     +LLSN++++AG ++  A +R   K +
Sbjct: 580 GALLGACRIHKNIDLGKQVSRMIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 639

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
              K  GCSWIE +  +H F  G+ SHP + +IY ELD + + IK+ GY  DT+FVL +L
Sbjct: 640 GFKKSPGCSWIEINGSLHAFVGGDQSHPCSPDIYHELDNILIDIKKLGYQADTSFVLQDL 699

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EEE+K + L  HSEK+A+AFG++S ++ K I V KNLRVCGDCHTAIKY+++V  R I++
Sbjct: 700 EEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIV 759

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFHH K+G+CSC D+W
Sbjct: 760 RDANRFHHFKNGQCSCGDFW 779



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 134/495 (27%), Positives = 248/495 (50%), Gaps = 16/495 (3%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+  +LK+C    +   G+ +H+      L  +  +  +LI LY +C     A  +
Sbjct: 97  PNKYTFPFVLKACSALADLCAGRTIHAHAAAVGLHTDLFVSTALIDLYIRCARFGPAANV 156

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTE 194
           F  M   RD+V+W++M++ Y N G    AI   ++M +  G  PN     +++   +   
Sbjct: 157 FAKM-PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHG 215

Query: 195 NVAIGHIIYGFLLKCGYFDSD---VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
            +  G  ++ + L+  Y D +   V +G AL+DM+ K    L  A +VF  MT +N V W
Sbjct: 216 ALFQGTSVHAYCLR-AYLDQNEEQVLIGTALLDMYAKCK-HLVYACRVFHGMTVRNEVTW 273

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
           + +I          +A  LF DM++ G  FL    +++  +  C+ L     G QLH+  
Sbjct: 274 SALIGGFVLCDRMTEAFNLFKDMLVEGMCFLSAT-SVASALRVCASLADLRMGTQLHALL 332

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
            ++G+  D+  G SL+ MYAK    G ++++  +FD +   + +S+ A+++GYVQ+ G+ 
Sbjct: 333 AKSGIHADLTAGNSLLSMYAKA---GLINEATMLFDEIAIKDTISYGALLSGYVQN-GKA 388

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           +EA  +F  M    V P+  T  S++ AC +L         +   + RG AL+  + NSL
Sbjct: 389 EEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALETSICNSL 448

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MYA+ GR++ +R+ F+ +  +++VS+NTM+  Y  +   ++A  L   +++ G     
Sbjct: 449 IDMYAKCGRIDLSRQVFDKMPARDIVSWNTMIAGYGIHGLGKEATTLFLSMKNQGFEPDD 508

Query: 490 YTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            TF  L++  S  G + +G+     +  K G       Y  ++ + +R   ++ A+Q  +
Sbjct: 509 VTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGFLDEAYQFIQ 568

Query: 549 EMEDR-NVISWTSMI 562
            M  + +V  W +++
Sbjct: 569 SMPLKADVRVWGALL 583



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 177/351 (50%), Gaps = 12/351 (3%)

Query: 55  NDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           N G    AI   LD+  + G  P+  T   LL    +      G  VH+   R+ L+ N 
Sbjct: 177 NHGMYHHAIAHLLDMQDRGGLRPNASTLVSLLPLLAQHGALFQGTSVHAYCLRAYLDQNE 236

Query: 114 ---VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
              +I  +L+ +Y+KC  L  A ++F  M   R+ V+WS++I  +V   +  +A ++F +
Sbjct: 237 EQVLIGTALLDMYAKCKHLVYACRVFHGM-TVRNEVTWSALIGGFVLCDRMTEAFNLFKD 295

Query: 171 MLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           ML  G C  +    ++ +R C++  ++ +G  ++  L K G   +D+  G +L+ M+ K 
Sbjct: 296 MLVEGMCFLSATSVASALRVCASLADLRMGTQLHALLAKSG-IHADLTAGNSLLSMYAKA 354

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            + +  A  +FD++  K+T+ +  +++   Q G   +A  +F  M      PD  T+  +
Sbjct: 355 GL-INEATMLFDEIAIKDTISYGALLSGYVQNGKAEEAFLVFKKMQACNVQPDIATMVSL 413

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + ACS L     G+  H   I  GLAL+  +  SL+DMYAKC   G +D SR+VFD+M  
Sbjct: 414 IPACSHLAALQHGRCSHGSVIIRGLALETSICNSLIDMYAKC---GRIDLSRQVFDKMPA 470

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            +++SW  +I GY    G  KEA  LF  M      P+  TF  ++ AC +
Sbjct: 471 RDIVSWNTMIAGY-GIHGLGKEATTLFLSMKNQGFEPDDVTFICLIAACSH 520



 Score = 85.9 bits (211), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 102/214 (47%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G+ ++A      M      PD+ T   L+ +C        G+  H  +    L   
Sbjct: 382 YVQNGKAEEAFLVFKKMQACNVQPDIATMVSLIPACSHLAALQHGRCSHGSVIIRGLALE 441

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I NSLI +Y+KCG ++ + ++F  M   RDIVSW++MI+ Y   G   +A  +F+ M 
Sbjct: 442 TSICNSLIDMYAKCGRIDLSRQVFDKM-PARDIVSWNTMIAGYGIHGLGKEATTLFLSMK 500

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG-HII------YGFLLKCGYFDSDVCVGCALIDM 225
             GF P++  F  +I ACS++  V  G H        YG L +  ++   +C    ++D+
Sbjct: 501 NQGFEPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY---IC----MVDL 553

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
             +G   L+ AY+    M  K  V  W  ++  C
Sbjct: 554 LARGGF-LDEAYQFIQSMPLKADVRVWGALLGAC 586


>gi|449464596|ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 269/703 (38%), Positives = 413/703 (58%), Gaps = 29/703 (4%)

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++  S  +++     I+  ++K G  ++   +   +    V  S D+  A  +F+ + E 
Sbjct: 33  LKLLSKCQSIRTFKQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYAISLFNSIEEP 92

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           N   W  MI   +    P  A+  F+ MI SG  P+ +T   ++ +C++L     GKQ+H
Sbjct: 93  NLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIH 152

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKC----------------------------TVDGSVD 338
           +  ++ G   DV +  SL++MYA+                              + G +D
Sbjct: 153 AHVLKLGFVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTALIAGYALWGYMD 212

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +R++FD M   +V+SW A+I GY Q G R KEA+ LF DM +  V PN  T  SVL AC
Sbjct: 213 RARQLFDEMPVKDVVSWNAMIAGYAQMG-RSKEALLLFEDMRKANVPPNESTIVSVLSAC 271

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
                 ++   + +    RG   +  + N+LI MY++ G ++ AR+ F+ + E++++S+N
Sbjct: 272 AQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKCGDLQTARELFDDMLERDVISWN 331

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  Y    + ++A  L  E+  +GV  +  TF S+L   + +GAI  G+ IHA I K+
Sbjct: 332 VMIGGYTHMCSYKEALALFREMLASGVEPTEITFLSILPSCAHLGAIDLGKWIHAYINKN 391

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
               +  +  +LI +Y++C N+ AA QVF  M+ +++ SW +MI G A HG A +A E+F
Sbjct: 392 FNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMICGLAMHGQADKAFELF 451

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
            KM +DGI+PN IT++ +LSAC HAGL+  G + F SM  ++ I  + +HY CM+DLLGR
Sbjct: 452 SKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGR 511

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           +G   EA   +++M +  D  +W + LGACR HG  ELG+  AE + E +P +P A++LL
Sbjct: 512 AGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHGRVELGELVAERLFELEPDNPGAYVLL 571

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SN+YA AG W+ VA IR R+ +R + K  GC+ IE DN VH+F VG+  HP++ +IY  L
Sbjct: 572 SNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRML 631

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
           +++  ++K FG++ DT+ VL++++EE K   L  HSEK+A+AFGLIST    PIR+ KNL
Sbjct: 632 EEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNL 691

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RVC +CH+A K IS +  REI+ RD NRFHH KDG CSCNDYW
Sbjct: 692 RVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 150/531 (28%), Positives = 259/531 (48%), Gaps = 51/531 (9%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI--SLYSKCGDLNEA 132
           HP L     LL  C   R F   K +H+ + ++ L      L+ LI  S  S+ GD++ A
Sbjct: 30  HPSLK----LLSKCQSIRTF---KQIHAHIIKTGLHNTLFALSKLIEFSAVSRSGDISYA 82

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
             +F S+  + ++  W+SMI           A+  FV M+  G  PN Y F  ++++C+ 
Sbjct: 83  ISLFNSI-EEPNLFIWNSMIRGLSMSLSPALALVFFVRMIYSGVEPNSYTFPFLLKSCAK 141

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD------------------- 232
             +   G  I+  +LK G F SDV +  +LI+M+ + G ++                   
Sbjct: 142 LASAHEGKQIHAHVLKLG-FVSDVFIHTSLINMYAQSGEMNNAQLVFDQSNFRDAISFTA 200

Query: 233 ----------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
                     ++ A ++FD+M  K+ V W  MI    Q+G  ++A+ LF DM  +   P+
Sbjct: 201 LIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQMGRSKEALLLFEDMRKANVPPN 260

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
             T+  V+SAC++      G  + SW    GL  ++ +  +L+DMY+KC   G +  +R+
Sbjct: 261 ESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLVNALIDMYSKC---GDLQTARE 317

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           +FD ML+ +V+SW  +I GY       KEA+ LF +M+   V P   TF S+L +C +L 
Sbjct: 318 LFDDMLERDVISWNVMIGGYTHMCSY-KEALALFREMLASGVEPTEITFLSILPSCAHLG 376

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
             ++ + ++ +  K   ++   +  SLI +YA+ G +  AR+ F+ +  K+L S+N M+ 
Sbjct: 377 AIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKCGNIVAARQVFDGMKIKSLASWNAMIC 436

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII---KSG 519
             A +  ++KAFEL  ++   G+  +  TF  +LS     G +  G+Q  + ++   K  
Sbjct: 437 GLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHAGLVDLGQQFFSSMVQDYKIS 496

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG 569
            +S H  Y  +I +  R    E A  + + ME + +   W S++     HG
Sbjct: 497 PKSQH--YGCMIDLLGRAGLFEEAESLLQNMEVKPDGAIWGSLLGACRDHG 545



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/412 (27%), Positives = 206/412 (50%), Gaps = 37/412 (8%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  LLKSC +  + H GK +H+ + +     +  I  SLI++Y++ G+
Sbjct: 120 MIYSGVEPNSYTFPFLLKSCAKLASAHEGKQIHAHVLKLGFVSDVFIHTSLINMYAQSGE 179

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
           +N A  +F     +                              +D+VSW++MI+ Y   
Sbjct: 180 MNNAQLVFDQSNFRDAISFTALIAGYALWGYMDRARQLFDEMPVKDVVSWNAMIAGYAQM 239

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G+  +A+ +F +M +    PNE    +V+ AC+ +  + +G+ +  ++   G   S++ +
Sbjct: 240 GRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRG-LCSNLKL 298

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             ALIDM+ K   DL++A ++FD M E++ + W +MI   T +   ++A+ LF +M+ SG
Sbjct: 299 VNALIDMYSKCG-DLQTARELFDDMLERDVISWNVMIGGYTHMCSYKEALALFREMLASG 357

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             P   T   ++ +C+ L     GK +H++  +   ++   +  SL+D+YAKC   G++ 
Sbjct: 358 VEPTEITFLSILPSCAHLGAIDLGKWIHAYINKNFNSVSTSLSTSLIDLYAKC---GNIV 414

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +R+VFD M   ++ SW A+I G    G  DK A +LFS M    + PN  TF  +L AC
Sbjct: 415 AARQVFDGMKIKSLASWNAMICGLAMHGQADK-AFELFSKMSSDGIEPNEITFVGILSAC 473

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVG-NSLISMYARSGRMEDARKAFESL 449
            +    ++ +Q ++  V+  +          +I +  R+G  E+A    +++
Sbjct: 474 KHAGLVDLGQQFFSSMVQDYKISPKSQHYGCMIDLLGRAGLFEEAESLLQNM 525



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 76/251 (30%), Positives = 126/251 (50%), Gaps = 3/251 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR ++A+   + M +    P+  T   +L +C +S    LG  + S +    L  N  ++
Sbjct: 240 GRSKEALLLFEDMRKANVPPNESTIVSVLSACAQSNALDLGNSMRSWIEDRGLCSNLKLV 299

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI +YSKCGDL  A ++F  M  +RD++SW+ MI  Y +     +A+ +F EML  G 
Sbjct: 300 NALIDMYSKCGDLQTARELFDDM-LERDVISWNVMIGGYTHMCSYKEALALFREMLASGV 358

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P E  F +++ +C++   + +G  I+ ++ K  +      +  +LID++ K   ++ +A
Sbjct: 359 EPTEITFLSILPSCAHLGAIDLGKWIHAYINK-NFNSVSTSLSTSLIDLYAKCG-NIVAA 416

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VFD M  K+   W  MI      G    A  LF  M   G  P+  T  G++SAC   
Sbjct: 417 RQVFDGMKIKSLASWNAMICGLAMHGQADKAFELFSKMSSDGIEPNEITFVGILSACKHA 476

Query: 297 ELFTSGKQLHS 307
            L   G+Q  S
Sbjct: 477 GLVDLGQQFFS 487


>gi|357485423|ref|XP_003612999.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355514334|gb|AES95957.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 676

 Score =  515 bits (1327), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 272/682 (39%), Positives = 413/682 (60%), Gaps = 10/682 (1%)

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
           C++++I   +N +++     ++  +LK G   S    G  LID ++K SV  E A K+FD
Sbjct: 3   CYTSLIAQFTNKKSLTTLKSLHTHILKSGSLFS--FFGHKLIDGYIKCSVITE-ARKLFD 59

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           +M  ++ V W  MI+     G  ++AI L+ +M+  G LPD +T S +  A SE+ +   
Sbjct: 60  EMPNRHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSRE 119

Query: 302 GKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           G++ H  A+  G  + D  V   +VDMYAK    G + D+R VFDR+LD +V+ +TA+I 
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKF---GKMKDARFVFDRVLDKDVVLFTALIV 176

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY Q G  D EA+++F DM+  ++ PN +T ASVL +CGNL D    + ++   VK G  
Sbjct: 177 GYNQRG-LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSGLE 235

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  SL++MY++   +ED+ K F SL   + V++ + +    +N   E A  +  E+
Sbjct: 236 SVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREM 295

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
               +  + +TF+S+L   SS+  +  GEQIHA  +K G + N  +  ALI +Y +C NV
Sbjct: 296 IRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKCGNV 355

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           E A  VF+ + + +V+S  +MI  +A++GF   ALE+F +M   G KPN +T+I++L AC
Sbjct: 356 EKARSVFESLTELDVVSINTMIYAYAQNGFGHEALELFERMKKLGHKPNVVTFISILLAC 415

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++AGL+ EG + F  + + H I    +HY CM+DLLGR+    EA   I     + DV+ 
Sbjct: 416 NNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEAAMLIEEGK-NPDVIQ 474

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           WRT L AC++HG+ E+ +   + +L+Q P+D   HILL+N+YASAG W+ V  ++   ++
Sbjct: 475 WRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRD 534

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             L K    SW++ D +VH F  G+ SHP+  EI   L +L  K+   GY PDT FVL +
Sbjct: 535 LRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQD 594

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           LEEE+K+  L+ HSEK+A+AF L  T  K+  IR+FKNLRVCGDCH+ IK++S++TGR+I
Sbjct: 595 LEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGDCHSWIKFVSLLTGRDI 654

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           + RD+ RFHH K G CSC DYW
Sbjct: 655 IARDAKRFHHFKGGICSCKDYW 676



 Score =  271 bits (693), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 171/494 (34%), Positives = 272/494 (55%), Gaps = 18/494 (3%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           + LI  Y KC  + EA K+F  M N R IV+W+SMISS+V+RGK  +AI ++  ML  G 
Sbjct: 39  HKLIDGYIKCSVITEARKLFDEMPN-RHIVTWNSMISSHVSRGKTKEAIELYDNMLFEGV 97

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ Y FSA+ +A S       G   +G  +  G+  SD  V   ++DM+ K    ++ A
Sbjct: 98  LPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG-KMKDA 156

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             VFD++ +K+ V +T +I    Q G   +A+ +F DM+ S   P+ +TL+ V+ +C  L
Sbjct: 157 RFVFDRVLDKDVVLFTALIVGYNQRGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNL 216

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
               +GK +H   +++GL   V    SL+ MY+KC +   V+DS KVF+ +   + ++WT
Sbjct: 217 GDLVNGKLIHGLVVKSGLESVVASQTSLLTMYSKCNM---VEDSIKVFNSLAYASHVTWT 273

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           + I G VQ+ GR++ A+ +F +MI+  ++PNHFTF+S+L AC +L      EQ++   VK
Sbjct: 274 SFIVGLVQN-GREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVK 332

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   +  V  +LI +Y + G +E AR  FESL E ++VS NTM+ AYA+N    +A EL
Sbjct: 333 LGVDGNKYVDAALIHLYGKCGNVEKARSVFESLTELDVVSINTMIYAYAQNGFGHEALEL 392

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI------YNAL 530
              ++  G   +  TF S+L   ++ G + +G QI + I      +NH I      Y  +
Sbjct: 393 FERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIFSLI-----RNNHSIELTRDHYTCM 447

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           I +  R    E A  + +E ++ +VI W +++     HG    A E F K + D    +G
Sbjct: 448 IDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNACKIHGEVEMA-EKFMKKMLDQAPRDG 506

Query: 591 ITYIAVLSACSHAG 604
            T+I + +  + AG
Sbjct: 507 GTHILLTNIYASAG 520



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 217/417 (52%), Gaps = 17/417 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE-P 111
           H++ G+ ++AI   D M  +G  PD  T+S + K+         G+  H L      E  
Sbjct: 76  HVSRGKTKEAIELYDNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVS 135

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +   ++ +Y+K G + +A  +F  + +K D+V ++++I  Y  RG   +A+ +F +M
Sbjct: 136 DGFVATGIVDMYAKFGKMKDARFVFDRVLDK-DVVLFTALIVGYNQRGLDGEALEVFEDM 194

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           +     PNEY  ++V+ +C N  ++  G +I+G ++K G  +S V    +L+ M+ K ++
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKSG-LESVVASQTSLLTMYSKCNM 253

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E + KVF+ +   + V WT  I    Q G    A+ +F +MI     P+ FT S ++ 
Sbjct: 254 -VEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEIALSMFREMIRCSISPNHFTFSSILH 312

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L +  +G+Q+H+  ++ G+  +  V  +L+ +Y KC   G+V+ +R VF+ + + +
Sbjct: 313 ACSSLAMLEAGEQIHAVTVKLGVDGNKYVDAALIHLYGKC---GNVEKARSVFESLTELD 369

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+S   +I  Y Q+ G   EA++LF  M +    PN  TF S+L AC N        Q++
Sbjct: 370 VVSINTMIYAYAQN-GFGHEALELFERMKKLGHKPNVVTFISILLACNNAGLVEEGCQIF 428

Query: 412 T-----HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
           +     H+++  R    C    +I +  R+ R E+A    E     +++ + T+++A
Sbjct: 429 SLIRNNHSIELTRDHYTC----MIDLLGRAKRFEEAAMLIEEGKNPDVIQWRTLLNA 481



 Score = 73.9 bits (180), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 99/205 (48%), Gaps = 2/205 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR + A+     M +    P+  T+S +L +C        G+ +H++  +  ++ N 
Sbjct: 280 VQNGREEIALSMFREMIRCSISPNHFTFSSILHACSSLAMLEAGEQIHAVTVKLGVDGNK 339

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  +LI LY KCG++ +A  +F+S+  + D+VS ++MI +Y   G   +A+ +F  M +
Sbjct: 340 YVDAALIHLYGKCGNVEKARSVFESL-TELDVVSINTMIYAYAQNGFGHEALELFERMKK 398

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           LG  PN   F +++ AC+N   V  G  I+  +      +        +ID+  +     
Sbjct: 399 LGHKPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAK-RF 457

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRC 258
           E A  + ++    + + W  ++  C
Sbjct: 458 EEAAMLIEEGKNPDVIQWRTLLNAC 482


>gi|356502620|ref|XP_003520116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Glycine max]
          Length = 785

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 272/693 (39%), Positives = 406/693 (58%), Gaps = 64/693 (9%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L+SA +VFD++ + ++V WT MI     LG  + A+  FL M+ SG  P +FT + V++
Sbjct: 94  NLDSARRVFDEIPQPDSVSWTTMIVGYNHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLA 153

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--TVDGSV------------ 337
           +C+  +    GK++HS+ ++ G +  V V  SL++MYAKC  +V   V            
Sbjct: 154 SCAAAQALDVGKKVHSFVVKLGQSGVVPVANSLLNMYAKCGDSVMAKVVFDRMRLKDTST 213

Query: 338 --------------DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                         D +  +FD+M D +++SW +IITGY   G  D  A++ FS M++  
Sbjct: 214 WNTMISMHMQFCQFDLALALFDQMTDPDIVSWNSIITGYCHQG-YDIRALETFSFMLKSS 272

Query: 384 -VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME-- 440
            + P+ FT  SVL AC N     + +Q++ H V+    +   VGN+LISMYA+SG +E  
Sbjct: 273 SLKPDKFTLGSVLSACANRESLKLGKQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVA 332

Query: 441 -------------------------------DARKAFESLFEKNLVSYNTMVDAYAKNLN 469
                                           AR  F+SL  +++V++  M+  YA+N  
Sbjct: 333 HRIVEITGTPSLNVIAFTSLLDGYFKIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQNGL 392

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
              A  L   +   G   + YT A++LS  SS+ ++  G+Q+HA  I+    S+  + NA
Sbjct: 393 ISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNA 452

Query: 530 LISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           LI+MYSR  +++ A ++F  +   R+ ++WTSMI   A+HG    A+E+F KML   +KP
Sbjct: 453 LITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKP 512

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + ITY+ VLSAC+H GL+ +G  +F  M + H I     HYACM+DLLGR+G L EA  F
Sbjct: 513 DHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNF 572

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           IR+MP+  DV+ W + L +CRVH   +L K AAE +L  DP +  A++ L+N  ++ G W
Sbjct: 573 IRNMPIEPDVVAWGSLLSSCRVHKYVDLAKVAAEKLLLIDPNNSGAYLALANTLSACGKW 632

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           E  A +RK MK++ + KE G SW++  NKVH F V +  HP+   IY  + ++  +IK+ 
Sbjct: 633 EDAAKVRKSMKDKAVKKEQGFSWVQIKNKVHIFGVEDALHPQRDAIYCMISKIWKEIKKM 692

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           G++PDTN VLH+LE+E K Q L  HSEK+A+AF LI+T K   +R+ KNLRVC DCH+AI
Sbjct: 693 GFIPDTNSVLHDLEQEVKEQILRHHSEKLAIAFALINTPKHTTVRIMKNLRVCNDCHSAI 752

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +YIS++  REI++RD+ RFHH KDG CSC DYW
Sbjct: 753 RYISLLVEREIIVRDATRFHHFKDGSCSCQDYW 785



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 173/652 (26%), Positives = 306/652 (46%), Gaps = 107/652 (16%)

Query: 68  LMTQKGNHPD-LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSK 125
           ++T   N P   D    LL+S I+SR+  +G+ +H+ + +  L    V L N+L++LY K
Sbjct: 1   MLTPTPNPPSHSDACVHLLQSAIKSRDPFIGRCIHARIIKHGLRYLGVFLTNNLLNLYVK 60

Query: 126 CGDLNEANKIFKSM------------------GN------------KRDIVSWSSMISSY 155
            G  ++A+++F  M                  GN            + D VSW++MI  Y
Sbjct: 61  TGSSSDAHRLFDEMPLKTTFSWNTILSAHAKAGNLDSARRVFDEIPQPDSVSWTTMIVGY 120

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
            + G    A+H F+ M+  G  P ++ F+ V+ +C+  + + +G  ++ F++K G     
Sbjct: 121 NHLGLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQ-SGV 179

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD-AIRLFLDM 274
           V V  +L++M+ K   D   A  VFD+M  K+T  W  MI+   Q  C  D A+ LF  M
Sbjct: 180 VPVANSLLNMYAKCG-DSVMAKVVFDRMRLKDTSTWNTMISMHMQF-CQFDLALALFDQM 237

Query: 275 ----------ILSGFL----------------------PDRFTLSGVVSACSELELFTSG 302
                     I++G+                       PD+FTL  V+SAC+  E    G
Sbjct: 238 TDPDIVSWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLG 297

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTV----------------------------- 333
           KQ+H+  +R  + +   VG +L+ MYAK                                
Sbjct: 298 KQIHAHIVRADVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYF 357

Query: 334 -DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G +D +R +FD +   +V++WTA+I GY Q+ G   +A+ LF  MI+    PN++T A
Sbjct: 358 KIGDIDPARAIFDSLKHRDVVAWTAMIVGYAQN-GLISDALVLFRLMIREGPKPNNYTLA 416

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE- 451
           +VL    +L   +  +Q++  A++        VGN+LI+MY+RSG ++DARK F  +   
Sbjct: 417 AVLSVISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSRSGSIKDARKIFNHICSY 476

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           ++ +++ +M+ + A++    +A EL  ++    +     T+  +LS  + +G + +G+  
Sbjct: 477 RDTLTWTSMILSLAQHGLGNEAIELFEKMLRINLKPDHITYVGVLSACTHVGLVEQGKS- 535

Query: 512 HARIIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           +  ++K+    E     Y  +I +  R   +E A+   + M  + +V++W S+++    H
Sbjct: 536 YFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSSCRVH 595

Query: 569 GFAARALEIFYKMLADGIKPNGI-TYIAVLSACSHAGLISEGWKHFRSMYDE 619
            +   A     K+L   I PN    Y+A+ +  S  G   +  K  +SM D+
Sbjct: 596 KYVDLAKVAAEKLLL--IDPNNSGAYLALANTLSACGKWEDAAKVRKSMKDK 645



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/478 (27%), Positives = 228/478 (47%), Gaps = 81/478 (16%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  + A+     M   G  P   T++ +L SC  ++   +GK VHS + +        + 
Sbjct: 124 GLFKSAVHAFLRMVSSGISPTQFTFTNVLASCAAAQALDVGKKVHSFVVKLGQSGVVPVA 183

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKR------------------------------DIV 146
           NSL+++Y+KCGD   A  +F  M  K                               DIV
Sbjct: 184 NSLLNMYAKCGDSVMAKVVFDRMRLKDTSTWNTMISMHMQFCQFDLALALFDQMTDPDIV 243

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           SW+S+I+ Y ++G  + A+  F  ML+     P+++   +V+ AC+N E++ +G  I+  
Sbjct: 244 SWNSIITGYCHQGYDIRALETFSFMLKSSSLKPDKFTLGSVLSACANRESLKLGKQIHAH 303

Query: 206 LLKCGYFDSDV--CVGCALIDMFVK-GSV------------------------------- 231
           +++    D D+   VG ALI M+ K G+V                               
Sbjct: 304 IVRA---DVDIAGAVGNALISMYAKSGAVEVAHRIVEITGTPSLNVIAFTSLLDGYFKIG 360

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D++ A  +FD +  ++ V WT MI    Q G   DA+ LF  MI  G  P+ +TL+ V+S
Sbjct: 361 DIDPARAIFDSLKHRDVVAWTAMIVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLS 420

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH- 350
             S L     GKQLH+ AIR      V VG +L+ MY++    GS+ D+RK+F+ +  + 
Sbjct: 421 VISSLASLDHGKQLHAVAIRLEEVSSVSVGNALITMYSR---SGSIKDARKIFNHICSYR 477

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ- 409
           + ++WT++I    Q  G   EA++LF  M++  + P+H T+  VL AC ++    + EQ 
Sbjct: 478 DTLTWTSMILSLAQH-GLGNEAIELFEKMLRINLKPDHITYVGVLSACTHV---GLVEQG 533

Query: 410 -VYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
             Y + +K    ++    +   +I +  R+G +E+A     ++  E ++V++ +++ +
Sbjct: 534 KSYFNLMKNVHNIEPTSSHYACMIDLLGRAGLLEEAYNFIRNMPIEPDVVAWGSLLSS 591



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 101/210 (48%), Gaps = 2/210 (0%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +  +G +  A+    LM ++G  P+  T + +L       +   GK +H++  R + 
Sbjct: 384 IVGYAQNGLISDALVLFRLMIREGPKPNNYTLAAVLSVISSLASLDHGKQLHAVAIRLEE 443

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +  + N+LI++YS+ G + +A KIF  + + RD ++W+SMI S    G   +AI +F 
Sbjct: 444 VSSVSVGNALITMYSRSGSIKDARKIFNHICSYRDTLTWTSMILSLAQHGLGNEAIELFE 503

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +ML +   P+   +  V+ AC++   V  G   +  +      +        +ID+  + 
Sbjct: 504 KMLRINLKPDHITYVGVLSACTHVGLVEQGKSYFNLMKNVHNIEPTSSHYACMIDLLGRA 563

Query: 230 SVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
            + LE AY     M  E + V W  +++ C
Sbjct: 564 GL-LEEAYNFIRNMPIEPDVVAWGSLLSSC 592


>gi|225445386|ref|XP_002281711.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic [Vitis vinifera]
          Length = 711

 Score =  515 bits (1326), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 262/661 (39%), Positives = 399/661 (60%), Gaps = 16/661 (2%)

Query: 205 FLLKCGYFD----SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            L  C + D    S +   CAL D     S  L  A  VF+++    T     +I   T 
Sbjct: 63  MLRTCLFVDPFSASKIVAFCALHD-----SGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 117

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
              PR AI  +  M+L G  PDRFT   +  +C  L     GKQLH  + + G A D  +
Sbjct: 118 KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL---CEGKQLHCHSTKLGFASDAYI 174

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +L++MY+ C   G +  +RKVFD+M++ +V+SW  +I  Y Q      EA+KLF  M 
Sbjct: 175 QNTLMNMYSNC---GCLVSARKVFDKMVNKSVVSWATMIGAYAQ-WDLPHEAIKLFRRME 230

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              V PN  T  +VL AC    D   A+QV+ +  + G      + ++L+ +Y + G   
Sbjct: 231 IASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHTVLTSALMDVYCKCGCYP 290

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            AR  F  + EKNL  +N M++ + ++ + E+A  L +E++ +GV     T ASLL   +
Sbjct: 291 LARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACT 350

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            +GA+  G+ +H  I K   E +  +  AL+ MY++C ++E+A +VF+EM +++V++WT+
Sbjct: 351 HLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTA 410

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I G A  G   +ALE+F++M    +KP+ IT++ VL+ACSHAGL++EG  +F SM +++
Sbjct: 411 LIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKY 470

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI   +EHY CMVD+LGR+G + EA + I++MP++ D  V    L ACR+HG+  + + A
Sbjct: 471 GIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLVGLLSACRIHGNLVVAERA 530

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ ++E DP++   ++LLSN+Y+S  +WE    +R+ M ERN+ K  GCS IE    VH+
Sbjct: 531 AQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNIKKPPGCSAIEVGGVVHE 590

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F  G+ SHP++ EIY  LD +  ++K  GY+PD + VL +++E++K   L  HSEK+A+A
Sbjct: 591 FVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMDEKEKENELSLHSEKLAIA 650

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGL+ST+   PIRV KNLRVC DCH+A+K+IS V  REI++RD NRFHH   G CSC D+
Sbjct: 651 FGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVRDRNRFHHFTKGSCSCRDF 710

Query: 861 W 861
           W
Sbjct: 711 W 711



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 156/523 (29%), Positives = 249/523 (47%), Gaps = 53/523 (10%)

Query: 37  IAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           I  PTT     N +I  + N    ++AI    LM  +G  PD  T+  L KSC       
Sbjct: 100 IPNPTTFT--CNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLC 154

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            GK +H   T+     ++ I N+L+++YS CG L  A K+F  M NK  +VSW++MI +Y
Sbjct: 155 EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK-SVVSWATMIGAY 213

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
                  +AI +F  M      PNE     V+ AC+ + ++     ++ ++ + G     
Sbjct: 214 AQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETAKQVHKYIDETGIGFHT 273

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V    AL+D++ K G   L  A  +F+KM EKN   W +MI    +     +A+ LF +M
Sbjct: 274 VLTS-ALMDVYCKCGCYPL--ARDLFNKMPEKNLFCWNIMINGHVEDSDYEEALSLFNEM 330

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            LSG   D+ T++ ++ AC+ L     GK LH +  +  + +DV +G +LVDMYAKC   
Sbjct: 331 QLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKC--- 387

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           GS++ + +VF  M + +VM+WTA+I G     G+  +A++LF +M   +V P+  TF  V
Sbjct: 388 GSIESAMRVFQEMPEKDVMTWTALIVGLAMC-GQGLKALELFHEMQMSEVKPDAITFVGV 446

Query: 395 LKACGNLLDSNVAEQVYTHA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           L AC             +HA  V  G A      NS+ + Y                 + 
Sbjct: 447 LAAC-------------SHAGLVNEGIAY----FNSMPNKYG---------------IQP 474

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           ++  Y  MVD   +     +A +L   I++  +    +    LLS     G +   E+  
Sbjct: 475 SIEHYGCMVDMLGRAGRIAEAEDL---IQNMPMAPDYFVLVGLLSACRIHGNLVVAERAA 531

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
            ++I+     N   Y  L ++YS   N EAA ++ + M +RN+
Sbjct: 532 QQLIELD-PKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 573



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 208/429 (48%), Gaps = 19/429 (4%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L  A  +F  + N     + +S+I  Y N+     AI  +  M+  G  P+ + F ++
Sbjct: 88  GSLPYARLVFNQIPNPTTF-TCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 146

Query: 187 IRACSNTENVAIGHIIYGFLLKCGY----FDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            ++C        G +  G  L C      F SD  +   L++M+      L SA KVFDK
Sbjct: 147 FKSC--------GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC-LVSARKVFDK 197

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M  K+ V W  MI    Q   P +AI+LF  M ++   P+  TL  V++AC+      + 
Sbjct: 198 MVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASVKPNEITLVNVLTACARSRDLETA 257

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+H +   TG+     +  +L+D+Y KC   G    +R +F++M + N+  W  +I G+
Sbjct: 258 KQVHKYIDETGIGFHTVLTSALMDVYCKC---GCYPLARDLFNKMPEKNLFCWNIMINGH 314

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V+    + EA+ LF++M    V  +  T AS+L AC +L    + + ++ +  K    +D
Sbjct: 315 VEDSDYE-EALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVD 373

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             +G +L+ MYA+ G +E A + F+ + EK+++++  ++   A      KA EL HE++ 
Sbjct: 374 VALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQM 433

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           + V   A TF  +L+  S  G + +G    ++   K G + +   Y  ++ M  R   + 
Sbjct: 434 SEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIA 493

Query: 542 AAFQVFKEM 550
            A  + + M
Sbjct: 494 EAEDLIQNM 502


>gi|357457743|ref|XP_003599152.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488200|gb|AES69403.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 277/788 (35%), Positives = 472/788 (59%), Gaps = 18/788 (2%)

Query: 79   DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFK 137
            +T + ++++C    +  +G  +   + +S L+ +SV + NSLIS++     + EA+++F 
Sbjct: 351  NTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFN 410

Query: 138  SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            +M  +RD +SW+S+I++  + G+  +++  F  M       +    SA++ AC + +++ 
Sbjct: 411  NM-QERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLK 469

Query: 198  IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
             G  ++G + K G  +S+VCV  +L+ M+ +     E A  VF  M  ++ + W  M+  
Sbjct: 470  WGRGLHGLITKSG-LESNVCVCNSLLSMYAQAGSS-EDAELVFHTMPARDLISWNSMMAS 527

Query: 258  CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
              + G    AI L ++M+ +    +  T +  +SAC  LE     K +H++ I   +  +
Sbjct: 528  HVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKL---KIVHAFVIHFAVHHN 584

Query: 318  VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA-VKLF 376
            + +G +LV MY K    G +D+++KV   M + +V++W A+I G+     +D  A ++ F
Sbjct: 585  LIIGNTLVTMYGKF---GLMDEAQKVCKIMPERDVVTWNALIGGHADD--KDPNATIQAF 639

Query: 377  SDMIQGQVAPNHFTFASVLKACGN---LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            + M +  +  N+ T  ++L  C +   LL   +   ++ H V  G  LD  V +SLI+MY
Sbjct: 640  NLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMP--IHAHIVVAGFELDTYVQSSLITMY 697

Query: 434  ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            A+ G +  +   F+ L  KN  ++N +  A A     E+A + +  + + GV    ++F+
Sbjct: 698  AQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSFS 757

Query: 494  SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
              L+   ++  + +G+Q+H+ IIK GFE +  + NA + MY +C  ++  F++    + R
Sbjct: 758  VALATIGNLTVLDEGQQLHSWIIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIR 817

Query: 554  NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
            +  SW  +I+  A+HGF  +A E F++ML  G+KP+ +T++++LSACSH GL+ EG  +F
Sbjct: 818  SKRSWNILISALARHGFFRQATEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEGLVYF 877

Query: 614  RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             SM  E G+   +EH  C++DLLGRSG L EA  FI  MP+  +  VWR+ L AC+VHG+
Sbjct: 878  SSMTSEFGVPTAIEHCVCIIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHGN 937

Query: 674  TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
             ELG+ AA+ + E +  D +A++L SN+ AS   W  V N+RK+M+ ++L K+  CSWI+
Sbjct: 938  LELGRKAADRLFELNSSDDSAYVLYSNVCASTQRWGDVENVRKQMESQSLKKKPACSWIK 997

Query: 734  ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
              NKV  F +G+  HP++ +IYA+L++L    +E G++PDT++ L + +EEQK   L+ H
Sbjct: 998  LKNKVMTFGMGDQFHPQSAQIYAKLEELRKMTREEGHMPDTSYALQDTDEEQKEHNLWNH 1057

Query: 794  SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
            SE+IA+AFGLI++++  P+R+FKNLRVCGDCH+  K +S + GR+IV+RDS RFHH   G
Sbjct: 1058 SERIALAFGLINSAEGSPLRIFKNLRVCGDCHSVFKLVSKIVGRKIVVRDSYRFHHFHGG 1117

Query: 854  KCSCNDYW 861
            KCSC+DYW
Sbjct: 1118 KCSCSDYW 1125



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 159/621 (25%), Positives = 307/621 (49%), Gaps = 19/621 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG-KLVHSLLTRSKLEPNSVI 115
           G   KA+     M + G  P     + ++ +C RS     G + +H  + +  L  N  +
Sbjct: 227 GWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFV 286

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             SL+  Y   G ++EANK+F+ +  + +IVSW+S++  Y + G   + ++++  +   G
Sbjct: 287 GTSLLHFYGTHGSVSEANKLFEEI-EEPNIVSWTSLMVCYADNGHTKEVLNIYRHLRHNG 345

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD-LE 234
                   + VIR C    +  +G+ I G ++K G   S V V  +LI MF  G+ D +E
Sbjct: 346 LICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMF--GNYDSVE 403

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A +VF+ M E++T+ W  +IT     G   +++  F  M  +    D  T+S ++ AC 
Sbjct: 404 EASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACG 463

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
             +    G+ LH    ++GL  +VCV  SL+ MYA+    GS +D+  VF  M   +++S
Sbjct: 464 SAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQA---GSSEDAELVFHTMPARDLIS 520

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W +++  +V+  G+   A+ L  +M++ + A N+ TF + L AC NL    +      H 
Sbjct: 521 WNSMMASHVED-GKYSHAILLLVEMLKTRKAMNYVTFTTALSACYNLEKLKIVHAFVIHF 579

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                 +   +GN+L++MY + G M++A+K  + + E+++V++N ++  +A + +     
Sbjct: 580 AVHHNLI---IGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNATI 636

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK-GEQIHARIIKSGFESNHCIYNALISM 533
           +  + +   G+ ++  T  +LL    S   + K G  IHA I+ +GFE +  + ++LI+M
Sbjct: 637 QAFNLMRREGLLSNYITIVNLLGTCMSPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITM 696

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C ++  +  +F  + ++N  +W ++ +  A +G    AL+   +M  DG+  +  ++
Sbjct: 697 YAQCGDLNTSSYIFDVLANKNSSTWNAIFSANAHYGPGEEALKFIARMRNDGVDLDQFSF 756

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA--CMVDLLGRSGSLTEALEFIRS 651
              L+   +  ++ EG +   S   + G    ++ Y     +D+ G+ G + +    I  
Sbjct: 757 SVALATIGNLTVLDEG-QQLHSWIIKLGF--ELDEYVLNATMDMYGKCGEIDDVFR-ILP 812

Query: 652 MPLSADVLVWRTFLGACRVHG 672
           +P       W   + A   HG
Sbjct: 813 IPKIRSKRSWNILISALARHG 833



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 158/566 (27%), Positives = 283/566 (50%), Gaps = 15/566 (2%)

Query: 38  AQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG 97
           A PT   PL N     L     +    +  + T   NH +      L K        ++G
Sbjct: 108 APPTPYSPLLN-CQNQLETCVKENEFLSYGIHTFIRNHSNPQVSRFLQKGFSEISEGNVG 166

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           K +H+L  +  ++ N+   N+L+++YSK G +  A  +F  M ++ D  SW++MIS +V 
Sbjct: 167 KALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRND-ASWNNMISGFVR 225

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG-HIIYGFLLKCGYFDSDV 216
            G    A+  F  M E G  P+ Y  ++++ AC  +  +  G   I+G+++KCG   S+V
Sbjct: 226 VGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLM-SNV 284

Query: 217 CVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            VG +L+  +   GSV    A K+F+++ E N V WT ++      G  ++ + ++  + 
Sbjct: 285 FVGTSLLHFYGTHGSV--SEANKLFEEIEEPNIVSWTSLMVCYADNGHTKEVLNIYRHLR 342

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVD 334
            +G +    T++ V+  C      T G Q+    I++GL    V V  SL+ M+      
Sbjct: 343 HNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYD-- 400

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
            SV+++ +VF+ M + + +SW +IIT    + GR +E++  F  M +     ++ T +++
Sbjct: 401 -SVEEASRVFNNMQERDTISWNSIITASAHN-GRFEESLGHFFWMRRTHPKTDYITISAL 458

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L ACG+         ++    K G   + CV NSL+SMYA++G  EDA   F ++  ++L
Sbjct: 459 LPACGSAQHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDL 518

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +S+N+M+ ++ ++     A  LL E+  T    +  TF + LS   +   + K + +HA 
Sbjct: 519 ISWNSMMASHVEDGKYSHAILLLVEMLKTRKAMNYVTFTTALSACYN---LEKLKIVHAF 575

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           +I      N  I N L++MY +   ++ A +V K M +R+V++W ++I G A        
Sbjct: 576 VIHFAVHHNLIIGNTLVTMYGKFGLMDEAQKVCKIMPERDVVTWNALIGGHADDKDPNAT 635

Query: 575 LEIFYKMLADGIKPNGITYIAVLSAC 600
           ++ F  M  +G+  N IT + +L  C
Sbjct: 636 IQAFNLMRREGLLSNYITIVNLLGTC 661



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 237/489 (48%), Gaps = 32/489 (6%)

Query: 221 ALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            L++M+ K GS+  + A  VFDKM ++N   W  MI+   ++G    A++ F  M  +G 
Sbjct: 187 TLVNMYSKFGSI--KYAQHVFDKMYDRNDASWNNMISGFVRVGWYHKAMQFFCHMFENGV 244

Query: 280 LPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
            P  + ++ +V+AC      T G +Q+H + ++ GL  +V VG SL+  Y      GSV 
Sbjct: 245 TPSSYVIASMVTACDRSGCMTEGARQIHGYVVKCGLMSNVFVGTSLLHFYG---THGSVS 301

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           ++ K+F+ + + N++SWT+++  Y  + G  KE + ++  +    +     T A+V++ C
Sbjct: 302 EANKLFEEIEEPNIVSWTSLMVCYADN-GHTKEVLNIYRHLRHNGLICTGNTMATVIRTC 360

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           G   D  +  Q+    +K G       V NSLISM+     +E+A + F ++ E++ +S+
Sbjct: 361 GMFGDKTMGYQILGDVIKSGLDTSSVSVANSLISMFGNYDSVEEASRVFNNMQERDTISW 420

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N+++ A A N   E++      +  T   T   T ++LL    S   +  G  +H  I K
Sbjct: 421 NSIITASAHNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITK 480

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           SG ESN C+ N+L+SMY++  + E A  VF  M  R++ISW SM+    + G  + A+ +
Sbjct: 481 SGLESNVCVCNSLLSMYAQAGSSEDAELVFHTMPARDLISWNSMMASHVEDGKYSHAILL 540

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
             +ML      N +T+   LSAC +     E  K   +      +   +     +V + G
Sbjct: 541 LVEMLKTRKAMNYVTFTTALSACYNL----EKLKIVHAFVIHFAVHHNLIIGNTLVTMYG 596

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           + G + EA +  + MP   DV+ W   +G            HA       D +DP A I 
Sbjct: 597 KFGLMDEAQKVCKIMP-ERDVVTWNALIGG-----------HA-------DDKDPNATIQ 637

Query: 698 LSNLYASAG 706
             NL    G
Sbjct: 638 AFNLMRREG 646



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 254/521 (48%), Gaps = 19/521 (3%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++GR ++++     M +     D  T S LL +C  +++   G+ +H L+T+S LE N  
Sbjct: 429 HNGRFEESLGHFFWMRRTHPKTDYITISALLPACGSAQHLKWGRGLHGLITKSGLESNVC 488

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSL+S+Y++ G   +A  +F +M   RD++SW+SM++S+V  GK   AI + VEML+ 
Sbjct: 489 VCNSLLSMYAQAGSSEDAELVFHTMP-ARDLISWNSMMASHVEDGKYSHAILLLVEMLKT 547

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               N   F+  + AC N E +    I++ F++       ++ +G  L+ M+ K  + ++
Sbjct: 548 RKAMNYVTFTTALSACYNLEKLK---IVHAFVIHFA-VHHNLIIGNTLVTMYGKFGL-MD 602

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC- 293
            A KV   M E++ V W  +I        P   I+ F  M   G L +  T+  ++  C 
Sbjct: 603 EAQKVCKIMPERDVVTWNALIGGHADDKDPNATIQAFNLMRREGLLSNYITIVNLLGTCM 662

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S   L   G  +H+  +  G  LD  V  SL+ MYA+C   G ++ S  +FD + + N  
Sbjct: 663 SPDYLLKHGMPIHAHIVVAGFELDTYVQSSLITMYAQC---GDLNTSSYIFDVLANKNSS 719

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           +W AI +      G  +EA+K  + M    V  + F+F+  L   GNL   +  +Q+++ 
Sbjct: 720 TWNAIFSANAHY-GPGEEALKFIARMRNDGVDLDQFSFSVALATIGNLTVLDEGQQLHSW 778

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K G  LD+ V N+ + MY + G ++D  +       ++  S+N ++ A A++    +A
Sbjct: 779 IIKLGFELDEYVLNATMDMYGKCGEIDDVFRILPIPKIRSKRSWNILISALARHGFFRQA 838

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----ESNHCIYNA 529
            E  HE+ D G+     TF SLLS  S  G + +G  ++   + S F       HC+   
Sbjct: 839 TEAFHEMLDLGLKPDHVTFVSLLSACSHGGLVDEG-LVYFSSMTSEFGVPTAIEHCV--C 895

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
           +I +  R   +  A     +M    N   W S++     HG
Sbjct: 896 IIDLLGRSGRLAEAEGFIDKMPVPPNEFVWRSLLAACKVHG 936



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 207/402 (51%), Gaps = 29/402 (7%)

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           SE+     GK LH+  ++  +  +     +LV+MY+K    GS+  ++ VFD+M D N  
Sbjct: 158 SEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKF---GSIKYAQHVFDKMYDRNDA 214

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQV 410
           SW  +I+G+V+ G   K A++ F  M +  V P+ +  AS++ AC   G + +   A Q+
Sbjct: 215 SWNNMISGFVRVGWYHK-AMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEG--ARQI 271

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + + VK G   +  VG SL+  Y   G + +A K FE + E N+VS+ +++  YA N ++
Sbjct: 272 HGYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIEEPNIVSWTSLMVCYADNGHT 331

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-IYNA 529
           ++   +   +   G+  +  T A+++      G    G QI   +IKSG +++   + N+
Sbjct: 332 KEVLNIYRHLRHNGLICTGNTMATVIRTCGMFGDKTMGYQILGDVIKSGLDTSSVSVANS 391

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LISM+    +VE A +VF  M++R+ ISW S+IT  A +G    +L  F+ M     K +
Sbjct: 392 LISMFGNYDSVEEASRVFNNMQERDTISWNSIITASAHNGRFEESLGHFFWMRRTHPKTD 451

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR--MEHYAC----MVDLLGRSGSLT 643
            IT  A+L AC  A       +H +     HG++ +  +E   C    ++ +  ++GS  
Sbjct: 452 YITISALLPACGSA-------QHLKWGRGLHGLITKSGLESNVCVCNSLLSMYAQAGSSE 504

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           +A     +MP + D++ W + + +       E GK++  ++L
Sbjct: 505 DAELVFHTMP-ARDLISWNSMMAS-----HVEDGKYSHAILL 540



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/171 (26%), Positives = 89/171 (52%), Gaps = 1/171 (0%)

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           L  G S I     G+ +HA  +K   + N    N L++MYS+  +++ A  VF +M DRN
Sbjct: 153 LQKGFSEISEGNVGKALHALCVKDVIQQNTFYTNTLVNMYSKFGSIKYAQHVFDKMYDRN 212

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
             SW +MI+GF + G+  +A++ F  M  +G+ P+     ++++AC  +G ++EG +   
Sbjct: 213 DASWNNMISGFVRVGWYHKAMQFFCHMFENGVTPSSYVIASMVTACDRSGCMTEGARQIH 272

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
               + G++  +     ++   G  GS++EA +    +    +++ W + +
Sbjct: 273 GYVVKCGLMSNVFVGTSLLHFYGTHGSVSEANKLFEEIE-EPNIVSWTSLM 322


>gi|224108621|ref|XP_002314911.1| predicted protein [Populus trichocarpa]
 gi|222863951|gb|EEF01082.1| predicted protein [Populus trichocarpa]
          Length = 743

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 266/713 (37%), Positives = 422/713 (59%), Gaps = 36/713 (5%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P  + ++ +I A S   N+     ++  + +   F  +      ++  + K S DL +  
Sbjct: 38  PETFLYNNLINAYSKLGNITYARHVFDKMPQPNSFSWNT-----MLSAYSK-SGDLSTMQ 91

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSEL 296
           ++F  M  ++ V W  +I+     G   +A++ +  M+  G L  +R T S ++   S  
Sbjct: 92  EIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQ 151

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV----------------------- 333
                G+Q+H   ++ G    V VG SLVDMYAK  +                       
Sbjct: 152 GCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMI 211

Query: 334 -----DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
                 G V DS+++F  M + + +SWT +ITG +Q+G  + EA+ LF DM Q  +A + 
Sbjct: 212 TGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNG-LEAEAMDLFRDMRQEGMAMDQ 270

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           +TF SVL ACG L      ++++T  ++ G   +  VG++L+ MY +   +  A   F+ 
Sbjct: 271 YTFGSVLTACGGLRALKEGKEIHTLIIRSGYNHNVFVGSALVDMYCKCRSVRYAEAVFKR 330

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           +  KN+VS+  M+  Y +N  SE+A  +  +++  G+    +T  S++S  +++ ++ +G
Sbjct: 331 MANKNVVSWTAMLVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEG 390

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
            Q H + + SG  S   + NALI++Y +C ++E + Q+F EM  R+ +SWT++++G+A+ 
Sbjct: 391 AQFHCQALVSGLISFITVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQF 450

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G A   +++F +ML  G+KP+ +T+IAVLSACS AGL+  G ++F SM  +HGI+   +H
Sbjct: 451 GKANETIDLFERMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDH 510

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y CM+DL GR+G L EA  FI  MP S D + W T L +CR++G+ E+GK AAE +LE D
Sbjct: 511 YTCMIDLFGRAGRLEEAKNFINKMPFSPDSIGWATLLSSCRLYGNEEIGKWAAESLLELD 570

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           PQ+PA +ILLS++YA+ G W  VA +R+ M+E+   KE G SWI+  +KV+ F   + S 
Sbjct: 571 PQNPAGYILLSSIYAAKGKWSNVAQLRRGMREKGARKEPGFSWIKYKSKVYIFSADDQSS 630

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
           P + +IYAEL++L  K+ E GY+PD + VLH++E+ +K++ L  HSEK+A+AFGL+    
Sbjct: 631 PFSDQIYAELEKLNHKMIEEGYVPDASSVLHDVEDSEKMKMLNHHSEKLAIAFGLLFIPH 690

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             PIRV KNLRVCGDCH A KYIS ++ REI++RD+ RFH  KDG CSC D+W
Sbjct: 691 GLPIRVVKNLRVCGDCHNATKYISKISQREILVRDAVRFHLFKDGTCSCGDFW 743



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 162/513 (31%), Positives = 264/513 (51%), Gaps = 50/513 (9%)

Query: 96  LGKLVHSLLTRSKL-EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           LG + ++     K+ +PNS   N+++S YSK GDL+   +IF  M N RD VSW+S+IS 
Sbjct: 53  LGNITYARHVFDKMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPN-RDGVSWNSLISG 111

Query: 155 YVNRGKQVDAIHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           YV  G  V+A+  +  M++ G    N   FS ++   S+   V +G  I+G ++K G F 
Sbjct: 112 YVCYGSVVEAVKTYNSMMKDGVLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFG-FG 170

Query: 214 SDVCVGCALIDMFVK-GSVDLES-----------------------------AYKVFDKM 243
           + V VG +L+DM+ K G V + S                             + ++F  M
Sbjct: 171 AYVFVGSSLVDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGM 230

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            E++++ WT MIT   Q G   +A+ LF DM   G   D++T   V++AC  L     GK
Sbjct: 231 KERDSISWTTMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGK 290

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           ++H+  IR+G   +V VG +LVDMY KC    SV  +  VF RM + NV+SWTA++ GY 
Sbjct: 291 EIHTLIIRSGYNHNVFVGSALVDMYCKCR---SVRYAEAVFKRMANKNVVSWTAMLVGYG 347

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           Q+ G  +EAV++F DM +  + P+ FT  SV+ +C NL       Q +  A+  G     
Sbjct: 348 QN-GFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFI 406

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N+LI++Y + G +ED+ + F+ +  ++ VS+  +V  YA+   + +  +L   +   
Sbjct: 407 TVSNALITLYGKCGSIEDSNQLFDEMSFRDEVSWTALVSGYAQFGKANETIDLFERMLVQ 466

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI------YNALISMYSRC 537
           G+   A TF ++LS  S  G + +G+Q    ++K     +H I      Y  +I ++ R 
Sbjct: 467 GLKPDAVTFIAVLSACSRAGLVERGQQYFESMLK-----DHGIIPFSDHYTCMIDLFGRA 521

Query: 538 ANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
             +E A     +M    + I W ++++    +G
Sbjct: 522 GRLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 137/496 (27%), Positives = 237/496 (47%), Gaps = 54/496 (10%)

Query: 11  KIPPPSSFK----PSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFT 65
           K+P P+SF      S  S+     +    F   P       N LI  ++  G V +A+ T
Sbjct: 65  KMPQPNSFSWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKT 124

Query: 66  LDLMTQKG----NHPDLDTYSLLLKS--CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            + M + G    N     T  LL+ S  C+      LG+ +H  + +        + +SL
Sbjct: 125 YNSMMKDGVLNLNRITFSTMLLLVSSQGCV-----DLGRQIHGQIVKFGFGAYVFVGSSL 179

Query: 120 ISLYSKCGDLNEANKIFKSMGNK------------------------------RDIVSWS 149
           + +Y+K G ++ A+++F  +  +                              RD +SW+
Sbjct: 180 VDMYAKMGLVSVASQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWT 239

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           +MI+  +  G + +A+ +F +M + G   ++Y F +V+ AC     +  G  I+  +++ 
Sbjct: 240 TMITGLIQNGLEAEAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEGKEIHTLIIRS 299

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
           GY + +V VG AL+DM+ K    +  A  VF +M  KN V WT M+    Q G   +A+R
Sbjct: 300 GY-NHNVFVGSALVDMYCK-CRSVRYAEAVFKRMANKNVVSWTAMLVGYGQNGFSEEAVR 357

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
           +F DM  +G  PD FTL  V+S+C+ L     G Q H  A+ +GL   + V  +L+ +Y 
Sbjct: 358 VFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGLISFITVSNALITLYG 417

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           KC   GS++DS ++FD M   + +SWTA+++GY Q  G+  E + LF  M+   + P+  
Sbjct: 418 KC---GSIEDSNQLFDEMSFRDEVSWTALVSGYAQF-GKANETIDLFERMLVQGLKPDAV 473

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVK-RGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           TF +VL AC         +Q +   +K  G          +I ++ R+GR+E+A+     
Sbjct: 474 TFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTCMIDLFGRAGRLEEAKNFINK 533

Query: 449 L-FEKNLVSYNTMVDA 463
           + F  + + + T++ +
Sbjct: 534 MPFSPDSIGWATLLSS 549



 Score = 95.9 bits (237), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 81/343 (23%), Positives = 153/343 (44%), Gaps = 65/343 (18%)

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           K C    +   A++++   +K     +  + N+LI+ Y++ G +  AR  F+ + + N  
Sbjct: 13  KLCCETRNQTQAKKLHCLIIKSLTNPETFLYNNLINAYSKLGNITYARHVFDKMPQPNSF 72

Query: 456 SYNTMVDAYAKNLN---SEKAFELLHE-----------------------------IEDT 483
           S+NTM+ AY+K+ +    ++ F ++                               ++D 
Sbjct: 73  SWNTMLSAYSKSGDLSTMQEIFSIMPNRDGVSWNSLISGYVCYGSVVEAVKTYNSMMKDG 132

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
            +  +  TF+++L   SS G +  G QIH +I+K GF +   + ++L+ MY++   V  A
Sbjct: 133 VLNLNRITFSTMLLLVSSQGCVDLGRQIHGQIVKFGFGAYVFVGSSLVDMYAKMGLVSVA 192

Query: 544 FQVFKEMEDRNV-------------------------------ISWTSMITGFAKHGFAA 572
            QVF E+++RNV                               ISWT+MITG  ++G  A
Sbjct: 193 SQVFDEVQERNVVMYNTMITGLLRSGMVKDSKRLFHGMKERDSISWTTMITGLIQNGLEA 252

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            A+++F  M  +G+  +  T+ +VL+AC     + EG K   ++    G    +   + +
Sbjct: 253 EAMDLFRDMRQEGMAMDQYTFGSVLTACGGLRALKEG-KEIHTLIIRSGYNHNVFVGSAL 311

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           VD+  +  S+  A    + M  + +V+ W   L     +G +E
Sbjct: 312 VDMYCKCRSVRYAEAVFKRMA-NKNVVSWTAMLVGYGQNGFSE 353



 Score = 90.5 bits (223), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 104/218 (47%), Gaps = 11/218 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ +  +G  ++A+     M + G  PD  T   ++ SC    +   G   H     S L
Sbjct: 343 LVGYGQNGFSEEAVRVFCDMQRNGIEPDDFTLGSVISSCANLASLEEGAQFHCQALVSGL 402

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                + N+LI+LY KCG + ++N++F  M + RD VSW++++S Y   GK  + I +F 
Sbjct: 403 ISFITVSNALITLYGKCGSIEDSNQLFDEM-SFRDEVSWTALVSGYAQFGKANETIDLFE 461

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK----CGYFDSDVCVGCALIDM 225
            ML  G  P+   F AV+ ACS    V  G   +  +LK      + D   C    +ID+
Sbjct: 462 RMLVQGLKPDAVTFIAVLSACSRAGLVERGQQYFESMLKDHGIIPFSDHYTC----MIDL 517

Query: 226 FVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLG 262
           F +    LE A    +KM    +++GW  +++ C   G
Sbjct: 518 FGRAG-RLEEAKNFINKMPFSPDSIGWATLLSSCRLYG 554


>gi|21741755|emb|CAD39781.1| OSJNBa0060B20.9 [Oryza sativa Japonica Group]
          Length = 897

 Score =  514 bits (1324), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 289/803 (35%), Positives = 450/803 (56%), Gaps = 67/803 (8%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           +++ Y  CG  + A  + + +      V W+ +I  ++ +G+   AI++   ML  G  P
Sbjct: 102 VVASYLACGATDYALLVLERV-TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRP 160

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           + +    V++AC    +   G   +G L+ C  F+S+V +  AL+ M+ + GS  LE A 
Sbjct: 161 DHFTLPHVLKACGELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCGS--LEEAS 217

Query: 238 KVFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDMIL------SGFLPDRFTLSG 288
            +FD++T++   + + W  +++   +      A+ LF  M L      +    D  ++  
Sbjct: 218 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 277

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++ AC  L+     K++H  AIR G   DV VG +L+D YAKC   G ++++ KVF+ M 
Sbjct: 278 ILPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC---GLMENAVKVFNMME 334

Query: 349 DHNVMSWTAIITGYVQSG----------------------------------GRDKEAVK 374
             +V+SW A++ GY QSG                                  G   EA+ 
Sbjct: 335 FKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALN 394

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR----------GRALDDC 424
           LF  MI     PN  T  SVL AC +L   +   +++ +++K           G   D  
Sbjct: 395 LFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLM 454

Query: 425 VGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-- 480
           V N+LI MY++    + AR  F+   L E+N+V++  M+  +A+  +S  A +L  E+  
Sbjct: 455 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 514

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESN-HCIYNALISMYSRCA 538
           E  GV  +AYT + +L   + + AI  G+QIHA +++   +ES+ + + N LI MYS+C 
Sbjct: 515 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCG 574

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +V+ A  VF  M  ++ ISWTSM+TG+  HG  + AL+IF KM   G  P+ IT++ VL 
Sbjct: 575 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 634

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSH G++ +G  +F SM  ++G+  R EHYAC +DLL RSG L +A   ++ MP+    
Sbjct: 635 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTA 694

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           +VW   L ACRVH + EL +HA   ++E + ++  ++ L+SN+YA+AG W+ VA IR  M
Sbjct: 695 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 754

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           K+  + K  GCSW++       F VG+ SHP + +IYA L+ L  +IK  GY+P+TNF L
Sbjct: 755 KKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 814

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H+++EE+K   L +HSEK+A+A+GL++TS   PIR+ KNLRVCGDCH+A  YIS +   E
Sbjct: 815 HDVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHE 874

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           IV+RD +RFHH K+G CSC  YW
Sbjct: 875 IVVRDPSRFHHFKNGSCSCGGYW 897



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 174/639 (27%), Positives = 305/639 (47%), Gaps = 79/639 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+  GR+  AI     M + G  PD  T   +LK+C    ++  G   H L+  +  E N
Sbjct: 137 HIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESN 196

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDAIHMFVE 170
             I N+L+++YS+CG L EA+ IF  +  +   D++SW+S++S++V       A+ +F +
Sbjct: 197 VFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK 256

Query: 171 M-LELGFCP-NE----YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           M L +   P NE         ++ AC + + V     ++G  ++ G F  DV VG ALID
Sbjct: 257 MTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALID 315

Query: 225 MFVK------------------------------GSVDLESAYKVFDKMTEKN----TVG 250
            + K                               S + E+A+++F  M ++N     V 
Sbjct: 316 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT 375

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           WT +I   +Q GC  +A+ LF  MI SG LP+  T+  V+SAC+ L  F+ G ++H++++
Sbjct: 376 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 435

Query: 311 RTGLAL----------DVCVGCSLVDMYAKCTVDGSVDDSRKVFDR--MLDHNVMSWTAI 358
           +  L            D+ V  +L+DMY+KC    S   +R +FD   + + NV++WT +
Sbjct: 436 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR---SFKAARSIFDDIPLEERNVVTWTVM 492

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           I G+ Q G  + +A+KLF +MI     VAPN +T + +L AC +L    + +Q++ + ++
Sbjct: 493 IGGHAQYGDSN-DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 551

Query: 417 RGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
             R       V N LI MY++ G ++ AR  F+S+ +K+ +S+ +M+  Y  +    +A 
Sbjct: 552 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 611

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISM 533
           ++  ++   G      TF  +L   S  G + +G     +     G       Y   I +
Sbjct: 612 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 671

Query: 534 YSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPN 589
            +R   ++ A++  K+M  +   + W ++++    H     A  AL    +M A+    N
Sbjct: 672 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE----N 727

Query: 590 GITYIAVLSACSHAGLISEGWK---HFRSMYDEHGIVQR 625
             +Y  + +  + AG     WK     R +  + GI +R
Sbjct: 728 DGSYTLISNIYATAGR----WKDVARIRHLMKKSGIKKR 762



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 36/321 (11%)

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL--------------------DD 423
           V P+HF  AS+LK C +   +N   Q++   +  G                         
Sbjct: 42  VYPSHF--ASLLKECKS---ANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPR 96

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            +G  +++ Y   G  + A    E +     V +N ++  + K    + A  +   +   
Sbjct: 97  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 156

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G     +T   +L     + +   G   H  I  +GFESN  I NAL++MYSRC ++E A
Sbjct: 157 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 216

Query: 544 FQVFKEMEDR---NVISWTSMITGFAKHGFAARALEIFYKM-LADGIKPNG-----ITYI 594
             +F E+  R   +VISW S+++   K   A  AL++F KM L    KP       I+ +
Sbjct: 217 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 276

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            +L AC     + +  K        +G    +     ++D   + G +  A++    M  
Sbjct: 277 NILPACGSLKAVPQT-KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 335

Query: 655 SADVLVWRTFLGACRVHGDTE 675
             DV+ W   +      G+ E
Sbjct: 336 K-DVVSWNAMVAGYSQSGNFE 355


>gi|224096249|ref|XP_002310592.1| predicted protein [Populus trichocarpa]
 gi|222853495|gb|EEE91042.1| predicted protein [Populus trichocarpa]
          Length = 747

 Score =  514 bits (1323), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 268/694 (38%), Positives = 408/694 (58%), Gaps = 68/694 (9%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LE A++VFD +  +++V WT +I    Q+G   DAI++F+DM+    LP +FTL+ V+++
Sbjct: 57  LEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVLPTQFTLTNVLAS 116

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       GK++HS+ ++ GL   V V  SL++MYAK    G +  ++ VFDRM   N 
Sbjct: 117 CAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKT---GDLKMAKVVFDRMKLRNT 173

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
            SW A+I+ ++  G                              G D EA++ FS +++ 
Sbjct: 174 SSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKD 233

Query: 383 -QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME- 440
             + P+ F+ AS L AC NL   +  +Q++ + V+        VGN+LISMYA+SG +E 
Sbjct: 234 TSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEI 293

Query: 441 --------------------------------DARKAFESLFEKNLVSYNTMVDAYAKNL 468
                                            AR+ F SL + ++V++  M+  Y +N 
Sbjct: 294 ARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVAWTAMIVGYVQNG 353

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
            +  A E+   +   G   +++T A++LS +SS+ ++  G+QIHA  I+SG   +  + N
Sbjct: 354 LNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGN 413

Query: 529 ALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           AL +MY++  ++  A +VF  + ++R+ +SWTSMI   A+HG    A+E+F +ML  GIK
Sbjct: 414 ALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIK 473

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+ ITY+ VLSAC+H GL+ +G  +F  M + H I   + HYACMVDL GR+G L EA +
Sbjct: 474 PDHITYVGVLSACTHGGLVEQGRSYFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYK 533

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
           F+ +MP+  DV+ W + L +C+V+ + +L K AAE +L  +P +  A+  L+N+Y+S G 
Sbjct: 534 FVENMPMEPDVIAWGSLLSSCKVYKNVDLAKVAAERLLLIEPNNSGAYSALANVYSSCGK 593

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W+  A IRK MK R + KE G SW++  NK H F V +  HP+  EIY  +D++  +IK+
Sbjct: 594 WDDAAKIRKLMKARGVKKEQGLSWVQIQNKTHVFGVEDGLHPQKDEIYKMMDKIWKEIKK 653

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            G+ PDT  VLH+LE E K Q L  HSEK+A+AFG+IST ++  +R+ KNLRVC DCH A
Sbjct: 654 MGFAPDTESVLHDLEVEVKDQILRYHSEKLAIAFGIISTPENTTLRIMKNLRVCNDCHNA 713

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IK+IS +  REI++RD+ RFHH KDG CSC DYW
Sbjct: 714 IKFISKLVDREIIVRDATRFHHFKDGSCSCKDYW 747



 Score =  223 bits (569), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 146/513 (28%), Positives = 269/513 (52%), Gaps = 71/513 (13%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+++S Y+K G L +A+++F  +   RD VSW+++I  Y   G+  DAI +FV+M++   
Sbjct: 45  NTILSGYAKQGKLEKAHQVF-DLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKV 103

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P ++  + V+ +C+ T +  IG  ++ F++K G   + V V  +L++M+ K + DL+ A
Sbjct: 104 LPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLG-LHACVPVANSLLNMYAK-TGDLKMA 161

Query: 237 YKVFDKMTEKNT-------------------------------VGWTLMITRCTQLGCPR 265
             VFD+M  +NT                               V W  MI  C Q G   
Sbjct: 162 KVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDN 221

Query: 266 DAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           +A++ F  ++    L PDRF+L+  +SAC+ LE  + GKQ+H + +RT       VG +L
Sbjct: 222 EALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNAL 281

Query: 325 VDMYAK----------------CTVD--------------GSVDDSRKVFDRMLDHNVMS 354
           + MYAK                  +D              G +  +R++F+ + D +V++
Sbjct: 282 ISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDPDVVA 341

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA+I GYVQ+ G + +A+++F  M+     PN FT A++L A  ++   N  +Q++  A
Sbjct: 342 WTAMIVGYVQN-GLNNDAIEVFKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASA 400

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKA 473
           ++ G AL   VGN+L +MYA++G +  ARK F  L + ++ VS+ +M+ A A++   E+A
Sbjct: 401 IRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEA 460

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALI 531
            EL  ++   G+     T+  +LS  +  G + +G   +  ++K+  + +  +  Y  ++
Sbjct: 461 IELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRS-YFDLMKNVHKIDPTLSHYACMV 519

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
            ++ R   ++ A++  + M  + +VI+W S+++
Sbjct: 520 DLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLS 552



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 156/582 (26%), Positives = 266/582 (45%), Gaps = 124/582 (21%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR + AI     M +    P   T + +L SC  + +  +GK VHS + +  L     + 
Sbjct: 86  GRFEDAIKIFVDMVKDKVLPTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVA 145

Query: 117 NSLISLYSKCGDLNEANKIFKSMG------------------------------NKRDIV 146
           NSL+++Y+K GDL  A  +F  M                               ++RDIV
Sbjct: 146 NSLLNMYAKTGDLKMAKVVFDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIV 205

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           SW+SMI+     G   +A+  F  +L +    P+ +  ++ + AC+N E ++ G  I+G+
Sbjct: 206 SWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGY 265

Query: 206 LLKCGYFDSDVCVGCALIDMFVK-GSV-------------------------------DL 233
           +++   FD+   VG ALI M+ K G V                               D+
Sbjct: 266 IVRT-MFDASGAVGNALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGDI 324

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A ++F+ + + + V WT MI    Q G   DAI +F  M+  G  P+ FTL+ ++SA 
Sbjct: 325 TPARQIFNSLKDPDVVAWTAMIVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLAAMLSAS 384

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
           S +     GKQ+H+ AIR+G AL   VG +L  MYAK    GS++ +RKVF+ +  + + 
Sbjct: 385 SSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKA---GSINGARKVFNLLRQNRDT 441

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQV 410
           +SWT++I    Q  G  +EA++LF  M+   + P+H T+  VL AC  G L++     + 
Sbjct: 442 VSWTSMIMALAQH-GLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQG---RS 497

Query: 411 YTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YA 465
           Y   +K    +D  + +   ++ ++ R+G +++A K  E++  E +++++ +++ +    
Sbjct: 498 YFDLMKNVHKIDPTLSHYACMVDLFGRAGLLQEAYKFVENMPMEPDVIAWGSLLSSCKVY 557

Query: 466 KNLNSEK-AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           KN++  K A E L  IE    G                                      
Sbjct: 558 KNVDLAKVAAERLLLIEPNNSGA------------------------------------- 580

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNV-----ISWTSM 561
             Y+AL ++YS C   + A ++ K M+ R V     +SW  +
Sbjct: 581 --YSALANVYSSCGKWDDAAKIRKLMKARGVKKEQGLSWVQI 620



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 99/383 (25%), Positives = 169/383 (44%), Gaps = 88/383 (22%)

Query: 53  HLNDGRVQKAIFTLDLMTQK------------GNH--------------------PDLDT 80
           H+N GRV  A+   +L++++              H                    PD  +
Sbjct: 183 HMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEALQFFSSILKDTSLKPDRFS 242

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC-------------- 126
            +  L +C        GK +H  + R+  + +  + N+LIS+Y+K               
Sbjct: 243 LASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGNALISMYAKSGGVEIARRIIEQSG 302

Query: 127 -------------------GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
                              GD+  A +IF S+ +  D+V+W++MI  YV  G   DAI +
Sbjct: 303 ISDLDVIAFTALLNGYVKLGDITPARQIFNSLKDP-DVVAWTAMIVGYVQNGLNNDAIEV 361

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F  M+  G  PN +  +A++ A S+  ++  G  I+   ++ G   S   VG AL  M+ 
Sbjct: 362 FKTMVSEGPRPNSFTLAAMLSASSSVTSLNHGKQIHASAIRSGEALSP-SVGNALTTMYA 420

Query: 228 K-GSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           K GS++   A KVF+ + + ++TV WT MI    Q G   +AI LF  M+  G  PD  T
Sbjct: 421 KAGSIN--GARKVFNLLRQNRDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHIT 478

Query: 286 LSGVVSACSELELFTSG-------KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             GV+SAC+   L   G       K +H   I   L+   C    +VD++ +    G + 
Sbjct: 479 YVGVLSACTHGGLVEQGRSYFDLMKNVHK--IDPTLSHYAC----MVDLFGRA---GLLQ 529

Query: 339 DSRKVFDRM-LDHNVMSWTAIIT 360
           ++ K  + M ++ +V++W ++++
Sbjct: 530 EAYKFVENMPMEPDVIAWGSLLS 552



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 60/237 (25%), Positives = 110/237 (46%), Gaps = 9/237 (3%)

Query: 23  PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           P+RQ       P  +A           ++ ++ +G    AI     M  +G  P+  T +
Sbjct: 326 PARQIFNSLKDPDVVAWTAM-------IVGYVQNGLNNDAIEVFKTMVSEGPRPNSFTLA 378

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            +L +     + + GK +H+   RS    +  + N+L ++Y+K G +N A K+F  +   
Sbjct: 379 AMLSASSSVTSLNHGKQIHASAIRSGEALSPSVGNALTTMYAKAGSINGARKVFNLLRQN 438

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD VSW+SMI +    G   +AI +F +ML LG  P+   +  V+ AC++   V  G   
Sbjct: 439 RDTVSWTSMIMALAQHGLGEEAIELFEQMLTLGIKPDHITYVGVLSACTHGGLVEQGRSY 498

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           +  +      D  +     ++D+F +  + L+ AYK  + M  E + + W  +++ C
Sbjct: 499 FDLMKNVHKIDPTLSHYACMVDLFGRAGL-LQEAYKFVENMPMEPDVIAWGSLLSSC 554



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 71/284 (25%), Positives = 136/284 (47%), Gaps = 42/284 (14%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+++S YA+ G++E A + F+ +  ++ VS+ T++  Y +    E A ++  ++    V 
Sbjct: 45  NTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKVL 104

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + +T  ++L+  ++ G+ G G+++H+ ++K G  +   + N+L++MY++  +++ A  V
Sbjct: 105 PTQFTLTNVLASCAATGSRGIGKKVHSFVVKLGLHACVPVANSLLNMYAKTGDLKMAKVV 164

Query: 547 FKEMEDRNVISW-------------------------------TSMITGFAKHGFAARAL 575
           F  M+ RN  SW                                SMI G  +HGF   AL
Sbjct: 165 FDRMKLRNTSSWNAMISLHMNCGRVDLALAQFELLSERDIVSWNSMIAGCNQHGFDNEAL 224

Query: 576 EIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEGWK-H---FRSMYDEHGIVQRMEHYA 630
           + F  +L D  +KP+  +  + LSAC++   +S G + H    R+M+D  G V       
Sbjct: 225 QFFSSILKDTSLKPDRFSLASALSACANLEKLSFGKQIHGYIVRTMFDASGAVGN----- 279

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLS-ADVLVWRTFLGACRVHGD 673
            ++ +  +SG +  A   I    +S  DV+ +   L      GD
Sbjct: 280 ALISMYAKSGGVEIARRIIEQSGISDLDVIAFTALLNGYVKLGD 323



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 43/168 (25%), Positives = 78/168 (46%), Gaps = 14/168 (8%)

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +N ++S Y++   +E A QVF  +  R+ +SWT++I G+ + G    A++IF  M+ D +
Sbjct: 44  WNTILSGYAKQGKLEKAHQVFDLIPVRDSVSWTTIIVGYNQMGRFEDAIKIFVDMVKDKV 103

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC------MVDLLGRSG 640
            P   T   VL++C+  G    G K        H  V ++  +AC      ++++  ++G
Sbjct: 104 LPTQFTLTNVLASCAATGSRGIGKK-------VHSFVVKLGLHACVPVANSLLNMYAKTG 156

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
            L  A      M L  +   W   +      G  +L     E++ E+D
Sbjct: 157 DLKMAKVVFDRMKLR-NTSSWNAMISLHMNCGRVDLALAQFELLSERD 203


>gi|115457318|ref|NP_001052259.1| Os04g0218100 [Oryza sativa Japonica Group]
 gi|113563830|dbj|BAF14173.1| Os04g0218100, partial [Oryza sativa Japonica Group]
          Length = 890

 Score =  513 bits (1322), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 287/802 (35%), Positives = 448/802 (55%), Gaps = 65/802 (8%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           +++ Y  CG  + A  + + +      V W+ +I  ++ +G+   AI++   ML  G  P
Sbjct: 95  VVASYLACGATDYALLVLERV-TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRP 153

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           + +    V++AC    +   G   +G L+ C  F+S+V +  AL+ M+ +    LE A  
Sbjct: 154 DHFTLPHVLKACGELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCG-SLEEASM 211

Query: 239 VFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDMIL------SGFLPDRFTLSGV 289
           +FD++T++   + + W  +++   +      A+ LF  M L      +    D  ++  +
Sbjct: 212 IFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVNI 271

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + AC  L+     K++H  AIR G   DV VG +L+D YAKC   G ++++ KVF+ M  
Sbjct: 272 LPACGSLKAVPQTKEVHGNAIRNGTFPDVFVGNALIDAYAKC---GLMENAVKVFNMMEF 328

Query: 350 HNVMSWTAIITGYVQSG----------------------------------GRDKEAVKL 375
            +V+SW A++ GY QSG                                  G   EA+ L
Sbjct: 329 KDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVTWTAVIAGYSQRGCSHEALNL 388

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR----------GRALDDCV 425
           F  MI     PN  T  SVL AC +L   +   +++ +++K           G   D  V
Sbjct: 389 FRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSLKNCLLTLDNDFGGEDEDLMV 448

Query: 426 GNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI--E 481
            N+LI MY++    + AR  F+   L E+N+V++  M+  +A+  +S  A +L  E+  E
Sbjct: 449 YNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMISE 508

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESN-HCIYNALISMYSRCAN 539
             GV  +AYT + +L   + + AI  G+QIHA +++   +ES+ + + N LI MYS+C +
Sbjct: 509 PYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHRYESSAYFVANCLIDMYSKCGD 568

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           V+ A  VF  M  ++ ISWTSM+TG+  HG  + AL+IF KM   G  P+ IT++ VL A
Sbjct: 569 VDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLYA 628

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CSH G++ +G  +F SM  ++G+  R EHYAC +DLL RSG L +A   ++ MP+    +
Sbjct: 629 CSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDLLARSGRLDKAWRTVKDMPMEPTAV 688

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           VW   L ACRVH + EL +HA   ++E + ++  ++ L+SN+YA+AG W+ VA IR  MK
Sbjct: 689 VWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLMK 748

Query: 720 ERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
           +  + K  GCSW++       F VG+ SHP + +IYA L+ L  +IK  GY+P+TNF LH
Sbjct: 749 KSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFALH 808

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           +++EE+K   L +HSEK+A+A+GL++TS   PIR+ KNLRVCGDCH+A  YIS +   EI
Sbjct: 809 DVDEEEKNNLLVEHSEKLALAYGLLTTSPGCPIRITKNLRVCGDCHSAFTYISKIVDHEI 868

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           V+RD +RFHH K+G CSC  YW
Sbjct: 869 VVRDPSRFHHFKNGSCSCGGYW 890



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 174/639 (27%), Positives = 305/639 (47%), Gaps = 79/639 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+  GR+  AI     M + G  PD  T   +LK+C    ++  G   H L+  +  E N
Sbjct: 130 HIKQGRLDSAINVSCRMLRAGTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESN 189

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDAIHMFVE 170
             I N+L+++YS+CG L EA+ IF  +  +   D++SW+S++S++V       A+ +F +
Sbjct: 190 VFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK 249

Query: 171 M-LELGFCP-NE----YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           M L +   P NE         ++ AC + + V     ++G  ++ G F  DV VG ALID
Sbjct: 250 MTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF-PDVFVGNALID 308

Query: 225 MFVK------------------------------GSVDLESAYKVFDKMTEKN----TVG 250
            + K                               S + E+A+++F  M ++N     V 
Sbjct: 309 AYAKCGLMENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFEAAFELFKNMRKENIPLDVVT 368

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           WT +I   +Q GC  +A+ LF  MI SG LP+  T+  V+SAC+ L  F+ G ++H++++
Sbjct: 369 WTAVIAGYSQRGCSHEALNLFRQMIFSGSLPNCVTIISVLSACASLGAFSQGTEIHAYSL 428

Query: 311 RTGLAL----------DVCVGCSLVDMYAKCTVDGSVDDSRKVFDR--MLDHNVMSWTAI 358
           +  L            D+ V  +L+DMY+KC    S   +R +FD   + + NV++WT +
Sbjct: 429 KNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR---SFKAARSIFDDIPLEERNVVTWTVM 485

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           I G+ Q G  + +A+KLF +MI     VAPN +T + +L AC +L    + +Q++ + ++
Sbjct: 486 IGGHAQYGDSN-DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLR 544

Query: 417 RGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
             R       V N LI MY++ G ++ AR  F+S+ +K+ +S+ +M+  Y  +    +A 
Sbjct: 545 HHRYESSAYFVANCLIDMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEAL 604

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISM 533
           ++  ++   G      TF  +L   S  G + +G     +     G       Y   I +
Sbjct: 605 DIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYACAIDL 664

Query: 534 YSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPN 589
            +R   ++ A++  K+M  +   + W ++++    H     A  AL    +M A+    N
Sbjct: 665 LARSGRLDKAWRTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE----N 720

Query: 590 GITYIAVLSACSHAGLISEGWK---HFRSMYDEHGIVQR 625
             +Y  + +  + AG     WK     R +  + GI +R
Sbjct: 721 DGSYTLISNIYATAGR----WKDVARIRHLMKKSGIKKR 755



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 129/321 (40%), Gaps = 36/321 (11%)

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-------------------- 423
           V P+HF  AS+LK C +   +N   Q++   +  G                         
Sbjct: 35  VYPSHF--ASLLKECKS---ANTVHQIHQQIIASGLLSLPTPLLSVSLPALPSEPFISPR 89

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            +G  +++ Y   G  + A    E +     V +N ++  + K    + A  +   +   
Sbjct: 90  SLGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRA 149

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G     +T   +L     + +   G   H  I  +GFESN  I NAL++MYSRC ++E A
Sbjct: 150 GTRPDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEA 209

Query: 544 FQVFKEMEDR---NVISWTSMITGFAKHGFAARALEIFYKM-LADGIKPNG-----ITYI 594
             +F E+  R   +VISW S+++   K   A  AL++F KM L    KP       I+ +
Sbjct: 210 SMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIV 269

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            +L AC     + +  K        +G    +     ++D   + G +  A++    M  
Sbjct: 270 NILPACGSLKAVPQT-KEVHGNAIRNGTFPDVFVGNALIDAYAKCGLMENAVKVFNMMEF 328

Query: 655 SADVLVWRTFLGACRVHGDTE 675
             DV+ W   +      G+ E
Sbjct: 329 K-DVVSWNAMVAGYSQSGNFE 348


>gi|224107977|ref|XP_002314675.1| predicted protein [Populus trichocarpa]
 gi|222863715|gb|EEF00846.1| predicted protein [Populus trichocarpa]
          Length = 845

 Score =  513 bits (1321), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 280/802 (34%), Positives = 455/802 (56%), Gaps = 44/802 (5%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCG---DLNEANKIFKSMGNKRDIVS----WSS 150
           K +HS +T++ L  + + L +LIS  ++ G    L  A K  +       I+     +SS
Sbjct: 50  KQLHSQITKNGLNHHPLSLTNLISSCTEMGTFESLEYAQKALELFIEDNGIMGTHYMFSS 109

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           +I  +   G    AI +F +++ +G  P+ + F  V+ AC+ +  +  G  ++G ++K G
Sbjct: 110 LIRGFSACGLGYKAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMG 169

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
            F+ D+ V  +LI  + +   +++   +VFDKM+E+N V WT +I    + GC ++A+ L
Sbjct: 170 -FERDMFVENSLIHFYGECG-EIDCMRRVFDKMSERNVVSWTSLIGGYAKRGCYKEAVSL 227

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F +M+  G  P+  T+ GV+SAC++L+    G+Q+ +      L ++  +  +LVDMY K
Sbjct: 228 FFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMVNALVDMYMK 287

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G++D +RK+FD  +D N++ +  I++ YV+ G   +E + +  +M++    P+  T
Sbjct: 288 C---GAIDKARKIFDECVDKNLVLYNTIMSNYVRQG-LAREVLAVLGEMLKHGPRPDRIT 343

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY----------------- 433
             S + AC  L D +  +  + + ++ G    D V N++I+MY                 
Sbjct: 344 MLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCNAIINMYMKCGKQEMACRVFDRML 403

Query: 434 --------------ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
                          R+G ME A K F ++ + +LVS+NTM+ A  +    ++A EL   
Sbjct: 404 NKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRV 463

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           ++  G+     T   + S    +GA+   + IH  I K     +  +  AL+ M++RC +
Sbjct: 464 MQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGD 523

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
            ++A QVF +M  R+V +WT+ I   A  G    A+E+F +ML  GIKP+G+ ++A+L+A
Sbjct: 524 PQSAMQVFNKMVKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTA 583

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
            SH GL+ +GW  FRSM D +GI  +  HY CMVDLLGR+G L+EAL  I SM +  + +
Sbjct: 584 LSHGGLVEQGWHIFRSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDV 643

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           +W + L ACRVH + ++  +AAE I E DP+    H+LLSN+YASAG W+ VA +R  +K
Sbjct: 644 IWGSLLAACRVHKNVDIAAYAAERISELDPERTGIHVLLSNIYASAGRWDDVAKVRLHLK 703

Query: 720 ERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
           E+   K  G S IE + K+ +F  G+ SHP+   I   L ++  ++++ GY+PD   VL 
Sbjct: 704 EKGAHKMPGSSSIEINGKIFEFTTGDESHPEMTHIEPMLKEICCRLRDIGYVPDLTNVLL 763

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           ++ E++K   L +HSEK+A+AF LIST +  PIRV KNLR+C DCH+  K +S    REI
Sbjct: 764 DVNEKEKEYLLSRHSEKLAIAFALISTGQGMPIRVAKNLRICSDCHSFAKLVSKSYSREI 823

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           ++RD+NRFH  + G CSC DYW
Sbjct: 824 IVRDNNRFHFFQQGFCSCGDYW 845



 Score =  224 bits (571), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 147/542 (27%), Positives = 264/542 (48%), Gaps = 42/542 (7%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           KAI     +   G  PD  T+  +L +C +S     G  VH  + +   E +  + NSLI
Sbjct: 122 KAIVVFRQLMCMGAVPDNFTFPFVLSACTKSAALTEGFQVHGAIVKMGFERDMFVENSLI 181

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
             Y +CG+++   ++F  M ++R++VSW+S+I  Y  RG   +A+ +F EM+E+G  PN 
Sbjct: 182 HFYGECGEIDCMRRVFDKM-SERNVVSWTSLIGGYAKRGCYKEAVSLFFEMVEVGIRPNS 240

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKV 239
                VI AC+  +++ +G  +   + +    + +  +  AL+DM++K G++D   A K+
Sbjct: 241 VTMVGVISACAKLQDLQLGEQVCTCIGEL-ELEVNALMVNALVDMYMKCGAID--KARKI 297

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FD+  +KN V +  +++   + G  R+ + +  +M+  G  PDR T+   VSACSEL+  
Sbjct: 298 FDECVDKNLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDV 357

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
           + GK  H + +R GL     V  ++++MY KC   G  + + +VFDRML+   +SW ++I
Sbjct: 358 SCGKWCHGYVLRNGLEGWDNVCNAIINMYMKC---GKQEMACRVFDRMLNKTRVSWNSLI 414

Query: 360 TGYVQSGGRD------------------------------KEAVKLFSDMIQGQVAPNHF 389
            G+V++G  +                              KEA++LF  M    +  +  
Sbjct: 415 AGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKV 474

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           T   V  ACG L   ++A+ ++ +  K+    D  +G +L+ M+AR G  + A + F  +
Sbjct: 475 TMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALVDMFARCGDPQSAMQVFNKM 534

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            ++++ ++   + A A   N   A EL  E+   G+      F +LL+  S  G + +G 
Sbjct: 535 VKRDVSAWTAAIGAMAMEGNGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQGW 594

Query: 510 QIHARIIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFA 566
            I  R +K   G       Y  ++ +  R   +  A  +   M+ + N + W S++    
Sbjct: 595 HIF-RSMKDIYGIAPQAVHYGCMVDLLGRAGLLSEALSLINSMQMEPNDVIWGSLLAACR 653

Query: 567 KH 568
            H
Sbjct: 654 VH 655



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 224/447 (50%), Gaps = 54/447 (12%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M + G  P+  T   ++ +C + ++  LG+ V + +   +LE N++++
Sbjct: 219 GCYKEAVSLFFEMVEVGIRPNSVTMVGVISACAKLQDLQLGEQVCTCIGELELEVNALMV 278

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+ +Y KCG +++A KIF    +K ++V +++++S+YV +G   + + +  EML+ G 
Sbjct: 279 NALVDMYMKCGAIDKARKIFDECVDK-NLVLYNTIMSNYVRQGLAREVLAVLGEMLKHGP 337

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD-VCVGCALIDMFVK------- 228
            P+     + + ACS  ++V+ G   +G++L+ G    D VC   A+I+M++K       
Sbjct: 338 RPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGWDNVCN--AIINMYMKCGKQEMA 395

Query: 229 --------------------GSV---DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
                               G V   D+ESA+K+F  M + + V W  MI    Q    +
Sbjct: 396 CRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPDSDLVSWNTMIGALVQESMFK 455

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           +AI LF  M   G   D+ T+ GV SAC  L      K +H +  +  +  D+ +G +LV
Sbjct: 456 EAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWIHGYIKKKDIHFDMHLGTALV 515

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DM+A+C   G    + +VF++M+  +V +WTA I G +   G    A++LF +M+Q  + 
Sbjct: 516 DMFARC---GDPQSAMQVFNKMVKRDVSAWTAAI-GAMAMEGNGTGAIELFDEMLQQGIK 571

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--------NSLISMYARSG 437
           P+   F ++L A   L    + EQ + H     R++ D  G          ++ +  R+G
Sbjct: 572 PDGVVFVALLTA---LSHGGLVEQGW-HIF---RSMKDIYGIAPQAVHYGCMVDLLGRAG 624

Query: 438 RMEDARKAFESL-FEKNLVSYNTMVDA 463
            + +A     S+  E N V + +++ A
Sbjct: 625 LLSEALSLINSMQMEPNDVIWGSLLAA 651



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 174/433 (40%), Gaps = 76/433 (17%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G  ++ +  L  M + G  PD  T    + +C    +   GK  H  + R+ LE  
Sbjct: 316 YVRQGLAREVLAVLGEMLKHGPRPDRITMLSAVSACSELDDVSCGKWCHGYVLRNGLEGW 375

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------ 142
             + N++I++Y KCG    A ++F  M NK                              
Sbjct: 376 DNVCNAIINMYMKCGKQEMACRVFDRMLNKTRVSWNSLIAGFVRNGDMESAWKIFSAMPD 435

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
            D+VSW++MI + V      +AI +F  M   G   ++     V  AC     + +   I
Sbjct: 436 SDLVSWNTMIGALVQESMFKEAIELFRVMQSEGITADKVTMVGVASACGYLGALDLAKWI 495

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +G++ K      D+ +G AL+DMF +   D +SA +VF+KM +++   WT  I      G
Sbjct: 496 HGYIKK-KDIHFDMHLGTALVDMFARCG-DPQSAMQVFNKMVKRDVSAWTAAIGAMAMEG 553

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
               AI LF +M+  G  PD      +++A S   L   G     W I   +  D+  G 
Sbjct: 554 NGTGAIELFDEMLQQGIKPDGVVFVALLTALSHGGLVEQG-----WHIFRSMK-DI-YGI 606

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +   ++  C VD                            +   G   EA+ L + M   
Sbjct: 607 APQAVHYGCMVD---------------------------LLGRAGLLSEALSLINSM--- 636

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD---DCVGNSLISMYARSGRM 439
           Q+ PN   + S+L AC   +  NV   +  +A +R   LD     +   L ++YA +GR 
Sbjct: 637 QMEPNDVIWGSLLAAC--RVHKNV--DIAAYAAERISELDPERTGIHVLLSNIYASAGRW 692

Query: 440 EDARKAFESLFEK 452
           +D  K    L EK
Sbjct: 693 DDVAKVRLHLKEK 705


>gi|297833028|ref|XP_002884396.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330236|gb|EFH60655.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 882

 Score =  513 bits (1320), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 294/836 (35%), Positives = 478/836 (57%), Gaps = 11/836 (1%)

Query: 29  PPSSSPPFI-AQPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK 86
           P SS   F    P  +  + N +I   + +G   KA+     + +    PD  T+  ++K
Sbjct: 55  PASSLSVFRRVSPAKNVYIWNSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIK 114

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C    +  +G LV+  +     E +  + N+L+ +YS+ G L+ A ++F  M   RD+V
Sbjct: 115 ACAGLFDAEMGDLVYKQILEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEM-PVRDLV 173

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW+S+IS Y + G   +A+ ++ E+      P+ +  S+V+ A +N   V  G  ++GF 
Sbjct: 174 SWNSLISGYSSHGYYEEALEIYHELRNSWIVPDSFTVSSVLPAFANLLVVKQGQGLHGFT 233

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           LK G  +S   V   L+ M++K S   + A +VFD+M  +++V +  MI    +L    +
Sbjct: 234 LKSG-VNSVSVVNNGLLAMYLKFSRPTD-ARRVFDEMVVRDSVTYNTMICGYLKLEMVEE 291

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           ++++FL+  L  F PD  T++ V+ AC  L   +  K ++++ +R G  L+  V   L+D
Sbjct: 292 SVKMFLEN-LDQFKPDILTVTSVLCACGHLRDLSLAKYIYNYMLRAGFVLESTVKNILID 350

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           +YAKC   G +  +R VF+ M   + +SW +II+GY+QSG    EA+KLF  M+  +   
Sbjct: 351 VYAKC---GDMITARDVFNSMECKDTVSWNSIISGYIQSGDL-MEAMKLFKMMMIMEEQA 406

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           +H T+  ++     L D    + ++++ +K G  +D  V N+LI MYA+ G + D+ K F
Sbjct: 407 DHITYLMLISLSTRLADLKFGKGLHSNGIKSGIYIDLSVSNALIDMYAKCGEVGDSLKIF 466

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
            S+   + V++NT++ A  +  +     ++  ++    V     TF   L   +S+ A  
Sbjct: 467 NSMGTLDTVTWNTVISACVRFGDFATGLQVTTQMRKNKVVPDMATFLVTLPMCASLAAKR 526

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
            G++IH  +++ G+ES   I NALI MYS+C  +E++F+VF+ M  R+V++WT MI  + 
Sbjct: 527 LGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLESSFRVFERMSRRDVVTWTGMIYAYG 586

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            +G   +ALE F  M   GI P+ + +IA++ ACSH+GL+ +G   F  M   + I   +
Sbjct: 587 MYGEGEKALESFVDMEKSGIVPDSVVFIALIYACSHSGLVEKGLACFEKMKTHYKIDPMI 646

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHYAC+VDLL RS  +++A EFI++MP+  D  +W + L ACR  GD E  +  +  I+E
Sbjct: 647 EHYACVVDLLSRSQKISKAEEFIQAMPIEPDASIWASVLRACRTSGDMETAERVSRRIIE 706

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            +P DP   IL SN YA+   W+ V+ IRK ++++++ K  G SWIE   KVH F  G+ 
Sbjct: 707 LNPDDPGYSILASNAYAALRKWDKVSLIRKSVRDKHIKKNPGYSWIEIGKKVHVFCSGDD 766

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL-EEEQKVQYLFQHSEKIAVAFGLIS 805
           S P++  I+  L+ L   + + GY+PD+  V   L EEE+K + +  HSE++A+AFGL++
Sbjct: 767 SAPQSEAIHKSLEILYSLMAKEGYIPDSREVSQNLEEEEEKRRLICGHSERLAIAFGLLN 826

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           T    P++V KNLRVC DCH   K IS + GREI++RD+NRFH  KDG CSC D W
Sbjct: 827 TEPGTPLQVMKNLRVCSDCHEVTKLISKIVGREILVRDANRFHLFKDGICSCKDRW 882



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 113/209 (54%), Gaps = 3/209 (1%)

Query: 404 SNVAEQVYTHAVKRGRALD--DCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTM 460
           SN+ E    HA+     LD  D     LI  Y+       +   F  +   KN+  +N++
Sbjct: 18  SNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIWNSI 77

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           + A++KN    KA E   ++ ++ V    YTF S++   + +     G+ ++ +I++ GF
Sbjct: 78  IRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYKQILEMGF 137

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
           ES+  + NAL+ MYSR   +  A QVF EM  R+++SW S+I+G++ HG+   ALEI+++
Sbjct: 138 ESDLYVGNALVDMYSRMGLLSRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHE 197

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEG 609
           +    I P+  T  +VL A ++  ++ +G
Sbjct: 198 LRNSWIVPDSFTVSSVLPAFANLLVVKQG 226



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/178 (27%), Positives = 83/178 (46%), Gaps = 5/178 (2%)

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISW 558
           SS   + +  +IHA +I  G + +      LI  YS      ++  VF+ +   +NV  W
Sbjct: 15  SSSSNLNELRRIHALVISLGLDGSDFFSGKLIDKYSHFRAPASSLSVFRRVSPAKNVYIW 74

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI-SEGWKHFRSMY 617
            S+I  F+K+G+  +ALE + K+    + P+  T+ +V+ AC  AGL  +E         
Sbjct: 75  NSIIRAFSKNGWFPKALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYKQI 132

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            E G    +     +VD+  R G L+ A +    MP+  D++ W + +     HG  E
Sbjct: 133 LEMGFESDLYVGNALVDMYSRMGLLSRARQVFDEMPVR-DLVSWNSLISGYSSHGYYE 189


>gi|57899529|dbj|BAD87043.1| vegetative storage protein-like [Oryza sativa Japonica Group]
          Length = 698

 Score =  512 bits (1318), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 283/704 (40%), Positives = 410/704 (58%), Gaps = 19/704 (2%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML     PN Y F   ++ACS   +   G  I+   +  G   +D+ V  AL+DM+VK +
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAG-LQADLFVSTALLDMYVKCA 59

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR--LFLDMILSGFLPDRFTLSG 288
             L  A  +F  M  ++ V W  M+      G    A+   L + M +    P+  TL  
Sbjct: 60  C-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118

Query: 289 VVSACSELELFTSGKQLHSWAIR----------TGLALDVCVGCSLVDMYAKCTVDGSVD 338
           ++   ++      G  +H++ IR          + L   V +G +L+DMYAKC   GS+ 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC---GSLL 175

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKA 397
            +R+VFD M   N ++W+A+I G+V    R  +A  LF  M+ QG    +  + AS L+A
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCS-RMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L    + EQ++    K G   D   GNSL+SMYA++G ++ A   F+ +  K+ VSY
Sbjct: 235 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSY 294

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           + +V  Y +N  +E+AF +  +++   V   A T  SL+   S + A+  G   H  +I 
Sbjct: 295 SALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVII 354

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
            G  S   I NALI MY++C  ++ + QVF  M  R+++SW +MI G+  HG    A  +
Sbjct: 355 RGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATAL 414

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M   G  P+G+T+I +LSACSH+GL+ EG   F  M   +G+  RMEHY CMVDLL 
Sbjct: 415 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLS 474

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R G L EA EFI+SMPL ADV VW   LGACRV+ + +LGK  + MI E  P+     +L
Sbjct: 475 RGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL 534

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN+Y++AG ++  A +R   K +   K  GCSWIE +  +H F  G+ SHP++ EIY E
Sbjct: 535 LSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRE 594

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           LD + + IK+ GY PDT+FVL +LEEE+K + L  HSEK+A+A+G++S S+ K I V KN
Sbjct: 595 LDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKN 654

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVCGDCHT IK+IS+V  R I++RD+NRFHH K+G+CSC D+W
Sbjct: 655 LRVCGDCHTVIKHISLVKRRAIIVRDANRFHHFKNGQCSCGDFW 698



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 251/505 (49%), Gaps = 28/505 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+   LK+C    + H G+ +H     + L+ +  +  +L+ +Y KC  L +A  I
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAI-HMFVEMLELG-FCPNEYCFSAVIRACSNT 193
           F +M   RD+V+W++M++ Y + G    A+ H+    +++    PN     A++   +  
Sbjct: 68  FATM-PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 126

Query: 194 ENVAIGHIIYGFLLKC---------GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
             +A G  ++ + ++                V +G AL+DM+ K    L  A +VFD M 
Sbjct: 127 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCG-SLLYARRVFDAMP 185

Query: 245 EKNTVGWTLMI---TRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELF 299
            +N V W+ +I     C+++     A  LF  M+  G  FL    +++  + AC+ L+  
Sbjct: 186 ARNEVTWSALIGGFVLCSRM---TQAFLLFKAMLAQGLCFLSPT-SIASALRACASLDHL 241

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+QLH+   ++G+  D+  G SL+ MYAK    G +D +  +FD M   + +S++A++
Sbjct: 242 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKA---GLIDQAIALFDEMAVKDTVSYSALV 298

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +GYVQ+ GR +EA  +F  M    V P+  T  S++ AC +L         +   + RG 
Sbjct: 299 SGYVQN-GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 357

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           A +  + N+LI MYA+ GR++ +R+ F  +  +++VS+NTM+  Y  +   ++A  L  E
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 417

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCA 538
           + + G      TF  LLS  S  G + +G+   H      G       Y  ++ + SR  
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 477

Query: 539 NVEAAFQVFKEMEDR-NVISWTSMI 562
            ++ A++  + M  R +V  W +++
Sbjct: 478 FLDEAYEFIQSMPLRADVRVWVALL 502



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR ++A      M      PD  T   L+ +C        G+  H  +    L   
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I N+LI +Y+KCG ++ + ++F  M + RDIVSW++MI+ Y   G   +A  +F+EM 
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMN 419

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG----HII---YGFLLKCGYFDSDVCVGCALIDM 225
            LGF P+   F  ++ ACS++  V  G    H++   YG   +  ++   +C    ++D+
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY---IC----MVDL 472

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
             +G   L+ AY+    M  +  V  W  ++  C
Sbjct: 473 LSRGGF-LDEAYEFIQSMPLRADVRVWVALLGAC 505


>gi|242076924|ref|XP_002448398.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
 gi|241939581|gb|EES12726.1| hypothetical protein SORBIDRAFT_06g026540 [Sorghum bicolor]
          Length = 865

 Score =  511 bits (1317), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 289/822 (35%), Positives = 447/822 (54%), Gaps = 80/822 (9%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           LL      PN +  N +++ Y K G L++A ++F  M   RD+ SW++++S Y    + +
Sbjct: 61  LLLTDIAHPNVITHNVMLNGYVKLGRLSDAVELFGRM-PARDVASWNTLMSGYFQSQQYL 119

Query: 163 DAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
            ++  FV M   G   PN + F+  +++C      ++   + G + K G  D D  V  A
Sbjct: 120 ASLESFVSMHRSGDSSPNAFTFAYAMKSCGALGERSLALQLLGMVQKFGSQD-DSDVAAA 178

Query: 222 LIDMFVK-GSVDLES-----------------------------AYKVFDKMTEKNTVGW 251
           L+DMFV+ G+VDL S                             A ++FD M E++ V W
Sbjct: 179 LVDMFVRCGTVDLASRLFVRIKEPTIFCRNSMLVGYVKTYGVDHALELFDSMPERDVVSW 238

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            +M++  +Q G  R+A+ + +DM   G   D  T +  ++AC+ L     GKQLH+  IR
Sbjct: 239 NMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR 298

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
               +D  V  +LV++YAKC   G   +++ VF+ + D N ++WT +I G++Q G    E
Sbjct: 299 NLPCIDPYVASALVELYAKC---GCFKEAKGVFNSLHDRNNVAWTVLIAGFLQHGCF-TE 354

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           +V+LF+ M    +  + F  A+++  C + +D  +  Q+++  +K G+     V NSLIS
Sbjct: 355 SVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLIS 414

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL-------------- 477
           MYA+   ++ A   F  + EK++VS+ +M+ A+++  N  KA E                
Sbjct: 415 MYAKCDNLQSAESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAM 474

Query: 478 ------HEIEDTG------------VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
                 H  E+ G            V     T+ +L  G + +GA   G+QI  R +K G
Sbjct: 475 LGAYIQHGAEEDGLRMYNVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVG 534

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
              +  + NA+I+MYS+C  +  A +VF  +  ++++SW +MITG+++HG   +A+EIF 
Sbjct: 535 LILDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFD 594

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            +L  G KP+ I+Y+AVLS CSH+GL+ EG  +F  M   H I   +EH++CMVDLLGR+
Sbjct: 595 DILKRGAKPDYISYVAVLSGCSHSGLVQEGKSYFDMMKRVHNISPGLEHFSCMVDLLGRA 654

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G LTEA + I  MP+     VW   L AC++HG+ EL + AA+ + E D  D  +++L++
Sbjct: 655 GHLTEAKDLIDEMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSYMLMA 714

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
            +YA AG  +  A IRK M+++ + K  G SW+E +NKVH F   + SHP+ + I  +LD
Sbjct: 715 KIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVNNKVHVFKADDVSHPQVIAIRKKLD 774

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L  KI   GY+                +    HSEK+AVAFGL+S     PI + KNLR
Sbjct: 775 ELMEKIARLGYV-----------RTDSPRSEIHHSEKLAVAFGLMSLPAWMPIHIMKNLR 823

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCHT IK IS VTGRE V+RD+ RFHH   G CSC DYW
Sbjct: 824 ICGDCHTVIKLISSVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 192/375 (51%), Gaps = 41/375 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GRV++A+  +  M  KG   D  TY+  L +C R  +   GK +H+ + R+    +  + 
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPCIDPYVA 308

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++L+ LY+KCG   EA  +F S+ + R+ V+W+ +I+ ++  G   +++ +F +M     
Sbjct: 309 SALVELYAKCGCFKEAKGVFNSL-HDRNNVAWTVLIAGFLQHGCFTESVELFNQMRAELM 367

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +++  + +I  C +  ++ +G  ++   LK G   + V V  +LI M+ K   +L+SA
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA-VVVSNSLISMYAKCD-NLQSA 425

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQL-------------------------------GCPR 265
             +F  M EK+ V WT MIT  +Q+                               G   
Sbjct: 426 ESIFRFMNEKDIVSWTSMITAHSQVGNIAKAREFFDGMSTKNVITWNAMLGAYIQHGAEE 485

Query: 266 DAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
           D +R++ +++LS     PD  T   +   C++L     G Q+    ++ GL LD  V  +
Sbjct: 486 DGLRMY-NVMLSEKDVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLILDTSVANA 544

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           ++ MY+KC   G + ++RKVFD +   +++SW A+ITGY Q  G  K+A+++F D+++  
Sbjct: 545 VITMYSKC---GRILEARKVFDFLNVKDIVSWNAMITGYSQH-GMGKQAIEIFDDILKRG 600

Query: 384 VAPNHFTFASVLKAC 398
             P++ ++ +VL  C
Sbjct: 601 AKPDYISYVAVLSGC 615


>gi|218195439|gb|EEC77866.1| hypothetical protein OsI_17132 [Oryza sativa Indica Group]
          Length = 865

 Score =  511 bits (1315), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 295/845 (34%), Positives = 456/845 (53%), Gaps = 82/845 (9%)

Query: 82  SLLLKSCIRSRNFHLGKL--VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           ++ L++ +    F  G L     LL     EPN +  N +++ Y+K G L++A ++F  M
Sbjct: 38  AVFLQNTLLHAYFSCGALSDARRLLRADIKEPNVITHNIMMNGYAKQGSLSDAEELFDRM 97

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAI 198
             +RD+ SW++++S Y    + +D +  FV M   G   PN + F  V+++C       +
Sbjct: 98  -PRRDVASWNTLMSGYFQARRFLDGLETFVSMHRSGDSLPNAFTFCCVMKSCGALGCREL 156

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES---------------------- 235
              + G   K  ++  D  V  AL+DMFV+ G VD  S                      
Sbjct: 157 APQLLGLFWKFDFW-GDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYA 215

Query: 236 -------AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
                  A + F+ M E++ V W +MI   +Q G  R+A+ L ++M   G   D  T + 
Sbjct: 216 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 275

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
            ++AC+ L     GKQLH+  IR+   +D  V  +L+++YAKC   GS  ++++VF+ + 
Sbjct: 276 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC---GSFKEAKRVFNSLQ 332

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           D N +SWT +I G +Q     K +V+LF+ M    +A + F  A+++  C N +D  +  
Sbjct: 333 DRNSVSWTVLIGGSLQYECFSK-SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 391

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q+++  +K G      V NSLIS+YA+ G +++A   F S+ E+++VS+ +M+ AY++  
Sbjct: 392 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 451

Query: 469 NSEKAFELL--------------------HEIEDTG------------VGTSAYTFASLL 496
           N  KA E                      H  E+ G            V     T+ +L 
Sbjct: 452 NIIKAREFFDGMDTRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 511

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
            G + IGA   G+QI    +K+G   N  + NA I+MYS+C  +  A ++F  +  ++V+
Sbjct: 512 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 571

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW +MITG+++HG   +A + F  ML+ G KP+ I+Y+AVLS CSH+GL+ EG  +F  M
Sbjct: 572 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 631

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
              HGI   +EH++CMVDLLGR+G LTEA + I  MP+     VW   L AC++HG+ EL
Sbjct: 632 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 691

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            + AA+ + E D  D  +++LL+ +Y+ AG  +  A +RK M+++ + K  G SW+E +N
Sbjct: 692 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVEN 751

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           KVH F   + SHP+ + I  +LD+L  KI   GY+             +  +    HSEK
Sbjct: 752 KVHVFKADDVSHPQVIAIRNKLDELMEKIAHLGYV-----------RTESPRSEIHHSEK 800

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +AVAFG++S     PI + KNLR+CGDCHT IK IS VT RE V+RD  RFHH K G CS
Sbjct: 801 LAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCS 860

Query: 857 CNDYW 861
           C DYW
Sbjct: 861 CGDYW 865



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 213/440 (48%), Gaps = 49/440 (11%)

Query: 48  NRLIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I  L+  GRV++A+  +  M +KG   D  TY+  L +C R  +   GK +H+ + R
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S  + +  + ++LI LY+KCG   EA ++F S+   R+ VSW+ +I   +       ++ 
Sbjct: 299 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVE 357

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F +M       +++  + +I  C N  ++ +G  ++   LK G+ +  + V  +LI ++
Sbjct: 358 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLY 416

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL------------------------- 261
            K   DL++A  VF  M+E++ V WT MIT  +Q+                         
Sbjct: 417 AKCG-DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMDTRNAITWNAML 475

Query: 262 ------GCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
                 G   D ++++  M+      PD  T   +   C+++     G Q+    ++ GL
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGL 535

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            L+V V  + + MY+KC   G + +++K+FD +   +V+SW A+ITGY Q  G  K+A K
Sbjct: 536 ILNVSVANAAITMYSKC---GRISEAQKLFDLLNGKDVVSWNAMITGYSQH-GMGKQAAK 591

Query: 375 LFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYT--HAVKRGRALDDCVGNSL 429
            F DM+     P++ ++ +VL  C   G + +  +   + T  H +  G     C    +
Sbjct: 592 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSC----M 647

Query: 430 ISMYARSGRMEDARKAFESL 449
           + +  R+G + +A+   + +
Sbjct: 648 VDLLGRAGHLTEAKDLIDKM 667



 Score = 46.2 bits (108), Expect = 0.081,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK-E 549
             A  L    S GA+     +H R++  G  S   + N L+  Y  C  +  A ++ + +
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYFSCGALSDARRLLRAD 65

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           +++ NVI+   M+ G+AK G  + A E+F +M
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRM 97


>gi|225423499|ref|XP_002274432.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 738

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 257/659 (38%), Positives = 402/659 (61%), Gaps = 30/659 (4%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L  A  +F+ + + N   W  MI   +    P  AI  ++ M+L G  P+ +T   ++ 
Sbjct: 81  NLSYALLLFESIEQPNQFIWNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLK 140

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK--------------------- 330
           +C+++     GKQ+H   ++ GL  D  V  SL++MYA+                     
Sbjct: 141 SCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYAELVFSKSSLRDAVS 200

Query: 331 -------CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                   T+ G +DD+R++F+ +   + +SW A+I GY QS GR +EA+  F +M +  
Sbjct: 201 FTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQS-GRFEEALAFFQEMKRAN 259

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           VAPN  T  +VL AC       +   V +     G   +  + N+LI MY++ G ++ AR
Sbjct: 260 VAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKCGDLDKAR 319

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
             FE + EK+++S+N M+  Y+   + ++A  L  +++ + V  +  TF S+L   + +G
Sbjct: 320 DLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPNDVTFVSILPACAYLG 379

Query: 504 AIGKGEQIHARIIKSGFE-SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           A+  G+ IHA I K     +N  ++ +LI MY++C N+EAA QVF  M+ +++ SW +MI
Sbjct: 380 ALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNAMI 439

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           +G A HG A  ALE+F +M  +G +P+ IT++ VLSACSHAGL+  G + F SM +++ I
Sbjct: 440 SGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDYDI 499

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
             +++HY CM+DLLGR+G   EA   +++M +  D  +W + LGACRVHG+ ELG+ AA+
Sbjct: 500 SPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFAAK 559

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            + E +P++P A++LLSN+YA+AG W+ VA IR ++ ++ + K  GCS IE D+ VH+F 
Sbjct: 560 HLFELEPENPGAYVLLSNIYATAGRWDDVARIRTKLNDKGMKKVPGCSSIEVDSVVHEFL 619

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
           VG+  H ++ +IY  LD++   +++ G++PDT+ VL++++EE K   L  HSEK+A+AFG
Sbjct: 620 VGDKVHEQSQDIYKMLDEIDQLLEKAGHVPDTSEVLYDMDEEWKEGSLSHHSEKLAIAFG 679

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LIST     IR+ KNLRVCG+CH+AIK IS +  REI+ RD NRFHH KDG CSC DYW
Sbjct: 680 LISTKPETTIRIVKNLRVCGNCHSAIKLISKIFNREIIARDRNRFHHFKDGSCSCMDYW 738



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 155/544 (28%), Positives = 257/544 (47%), Gaps = 56/544 (10%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL--YSKCGDLNE 131
           NHP L     LL +C   ++F   K +HS + ++ L      L+ LI     S  G+L+ 
Sbjct: 32  NHPSLT----LLSTC---KSFQNLKQIHSQIIKTGLHNTQFALSKLIEFCAISPFGNLSY 84

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A  +F+S+      + W++MI         V AI  +V ML  G  PN Y F  ++++C+
Sbjct: 85  ALLLFESIEQPNQFI-WNTMIRGNSLSSSPVGAIDFYVRMLLCGVEPNSYTFPFLLKSCA 143

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
                  G  I+G +LK G  +SD  V  +LI+M+ +   +L  A  VF K + ++ V +
Sbjct: 144 KVGATQEGKQIHGHVLKLG-LESDPFVHTSLINMYAQNG-ELGYAELVFSKSSLRDAVSF 201

Query: 252 TLMITRCTQLGCPRDAIRLFLDM----------ILSGF---------------------L 280
           T +IT  T  GC  DA RLF ++          +++G+                      
Sbjct: 202 TALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFEEALAFFQEMKRANVA 261

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+  T+  V+SAC++      G  + SW    GL  ++ +  +L+DMY+KC   G +D +
Sbjct: 262 PNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLVNALIDMYSKC---GDLDKA 318

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R +F+ + + +++SW  +I GY       KEA+ LF  M Q  V PN  TF S+L AC  
Sbjct: 319 RDLFEGICEKDIISWNVMIGGYSHMNSY-KEALALFRKMQQSNVEPNDVTFVSILPACAY 377

Query: 401 LLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
           L   ++ + ++ +  K+   L +  +  SLI MYA+ G +E A++ F  +  K+L S+N 
Sbjct: 378 LGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCGNIEAAKQVFAGMKPKSLGSWNA 437

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS- 518
           M+   A + ++  A EL  ++ D G      TF  +LS  S  G +  G Q  + +++  
Sbjct: 438 MISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHAGLVELGRQCFSSMVEDY 497

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG------FA 571
                   Y  +I +  R    + A  + K ME + +   W S++     HG      FA
Sbjct: 498 DISPKLQHYGCMIDLLGRAGLFDEAEALMKNMEMKPDGAIWGSLLGACRVHGNVELGEFA 557

Query: 572 ARAL 575
           A+ L
Sbjct: 558 AKHL 561



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 181/375 (48%), Gaps = 37/375 (9%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  P+  T+  LLKSC +      GK +H  + +  LE +  +  SLI++Y++ G+L  A
Sbjct: 127 GVEPNSYTFPFLLKSCAKVGATQEGKQIHGHVLKLGLESDPFVHTSLINMYAQNGELGYA 186

Query: 133 NKIFKSMGNK------------------------------RDIVSWSSMISSYVNRGKQV 162
             +F     +                              RD VSW++MI+ Y   G+  
Sbjct: 187 ELVFSKSSLRDAVSFTALITGYTLRGCLDDARRLFEEIPVRDAVSWNAMIAGYAQSGRFE 246

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           +A+  F EM      PNE     V+ AC+ + ++ +G+ +  ++   G   S++ +  AL
Sbjct: 247 EALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHG-LGSNLRLVNAL 305

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           IDM+ K   DL+ A  +F+ + EK+ + W +MI   + +   ++A+ LF  M  S   P+
Sbjct: 306 IDMYSKCG-DLDKARDLFEGICEKDIISWNVMIGGYSHMNSYKEALALFRKMQQSNVEPN 364

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSR 341
             T   ++ AC+ L     GK +H++  +  L L +  +  SL+DMYAKC   G+++ ++
Sbjct: 365 DVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKC---GNIEAAK 421

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           +VF  M   ++ SW A+I+G    G  +  A++LF  M      P+  TF  VL AC + 
Sbjct: 422 QVFAGMKPKSLGSWNAMISGLAMHGHANM-ALELFRQMRDEGFEPDDITFVGVLSACSHA 480

Query: 402 LDSNVAEQVYTHAVK 416
               +  Q ++  V+
Sbjct: 481 GLVELGRQCFSSMVE 495



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 80/251 (31%), Positives = 131/251 (52%), Gaps = 2/251 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR ++A+     M +    P+  T   +L +C +S +  LG  V S +    L  N  ++
Sbjct: 243 GRFEEALAFFQEMKRANVAPNESTMVTVLSACAQSGSLELGNWVRSWIEDHGLGSNLRLV 302

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI +YSKCGDL++A  +F+ +  K DI+SW+ MI  Y +     +A+ +F +M +   
Sbjct: 303 NALIDMYSKCGDLDKARDLFEGICEK-DIISWNVMIGGYSHMNSYKEALALFRKMQQSNV 361

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN+  F +++ AC+    + +G  I+ ++ K     ++  +  +LIDM+ K   ++E+A
Sbjct: 362 EPNDVTFVSILPACAYLGALDLGKWIHAYIDKKFLGLTNTSLWTSLIDMYAKCG-NIEAA 420

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF  M  K+   W  MI+     G    A+ LF  M   GF PD  T  GV+SACS  
Sbjct: 421 KQVFAGMKPKSLGSWNAMISGLAMHGHANMALELFRQMRDEGFEPDDITFVGVLSACSHA 480

Query: 297 ELFTSGKQLHS 307
            L   G+Q  S
Sbjct: 481 GLVELGRQCFS 491


>gi|357509307|ref|XP_003624942.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499957|gb|AES81160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1092

 Score =  510 bits (1314), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 286/787 (36%), Positives = 454/787 (57%), Gaps = 24/787 (3%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           H D D ++ L  SC+   N +  K +H+LL       N V+   LI+LY   GD++ +  
Sbjct: 20  HKDAD-FNALFNSCV---NVNATKKLHALLLVFGKSQNIVLSTKLINLYVTHGDISLSRS 75

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----GFCPNEYCFSAVIRAC 190
            F  + +K++I SW+S+IS+YV  GK  +A++   ++  +       P+ Y F  +++AC
Sbjct: 76  TFDYI-HKKNIFSWNSIISAYVRFGKYHEAMNCVNQLFSMCGGGHLRPDFYTFPPILKAC 134

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
            +  +   G  ++  + K G F+ DV V  +L+ ++ +  V L+ A+KVF  M  K+   
Sbjct: 135 VSLVD---GKKVHCCVFKMG-FEDDVFVAASLVHLYSRYGV-LDVAHKVFVDMPVKDVGS 189

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  MI+   Q G    A+ +   M   G   D  T++ ++  C++ +   +G  +H   +
Sbjct: 190 WNAMISGFCQNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVL 249

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           + GL  DV V  +L++MY+K    G + D++ VFD+M   +++SW +II  Y Q+     
Sbjct: 250 KHGLDSDVFVSNALINMYSKF---GRLQDAQMVFDQMEVRDLVSWNSIIAAYEQNND-PS 305

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV-GNSL 429
            A++ F  M  G + P+  T  S+      L D  ++  +    ++R     D V GN+L
Sbjct: 306 TALRFFKGMQLGGIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNAL 365

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-LNSE--KAFELLHEIEDTGVG 486
           ++MYA+ G M  A   F+ L  K+ +S+NT+V  Y +N L SE   A+ ++ E  DT   
Sbjct: 366 VNMYAKLGYMNCAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAYNMMEECRDTIPN 425

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
               T+ S++   S +GA+ +G +IHA++IK+    +  +   LI +Y +C  +E A  +
Sbjct: 426 QG--TWVSIIPAYSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKCGRLEDAMSL 483

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F E+     + W ++I     HG    AL++F  MLA+ +K + IT++++LSACSH+GL+
Sbjct: 484 FYEIPRDTSVPWNAIIASLGIHGRGEEALQLFKDMLAERVKADHITFVSLLSACSHSGLV 543

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            EG K F  M  E+GI   ++HY CMVDLLGR+G L +A E +R+MP+  D  +W   L 
Sbjct: 544 DEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRAGYLEKAYELVRNMPIQPDASIWGALLS 603

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
           AC+++G+ ELG  A++ +LE D ++   ++LLSN+YA+   WE V  +R   ++R L K 
Sbjct: 604 ACKIYGNAELGTLASDRLLEVDSENVGYYVLLSNIYANTEKWEGVIKVRSLARDRGLRKT 663

Query: 727 AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
            G S +   +K   F+ G  +HPK  EIY EL  L+ K+K  GY+PD +FV  ++EE++K
Sbjct: 664 PGWSSVVVGSKAEVFYTGNQTHPKYTEIYKELKVLSAKMKSLGYVPDYSFVYQDIEEDEK 723

Query: 787 VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
            Q L  HSE++A+AFG+IST    PIR+FKNLRVCGDCH A KYIS ++ REIV+RDSNR
Sbjct: 724 EQILNSHSERLAIAFGIISTPPRSPIRIFKNLRVCGDCHNATKYISRISEREIVVRDSNR 783

Query: 847 FHHIKDG 853
           FHH KDG
Sbjct: 784 FHHFKDG 790



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 240/520 (46%), Gaps = 56/520 (10%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G    A+  L+ M  +G   D  T + +L  C +S +   G L+H  + +  L+ +  
Sbjct: 199 QNGNAAGALGVLNRMKGEGVKMDTITVASILPVCAQSDDVINGVLIHLHVLKHGLDSDVF 258

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+LI++YSK G L +A  +F  M   RD+VSW+S+I++Y        A+  F  M   
Sbjct: 259 VSNALINMYSKFGRLQDAQMVFDQM-EVRDLVSWNSIIAAYEQNNDPSTALRFFKGMQLG 317

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+     ++    S   +  I   I GF+++  + D DV +G AL++M+ K    + 
Sbjct: 318 GIRPDLLTVVSLTSIFSQLSDQRISRSILGFVIRREWLDKDVVIGNALVNMYAKLGY-MN 376

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI--LSGFLPDRFTLSGVVSA 292
            A+ VFD++  K+T+ W  ++T  TQ G   +AI  + +M+      +P++ T   ++ A
Sbjct: 377 CAHTVFDQLPRKDTISWNTLVTGYTQNGLASEAIDAY-NMMEECRDTIPNQGTWVSIIPA 435

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            S +     G ++H+  I+  L LDV V   L+D+Y KC   G ++D+  +F  +     
Sbjct: 436 YSHVGALQQGMKIHAKLIKNSLYLDVFVATCLIDLYGKC---GRLEDAMSLFYEIPRDTS 492

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           + W AII   +   GR +EA++LF DM+  +V  +H TF S+L AC              
Sbjct: 493 VPWNAIIAS-LGIHGRGEEALQLFKDMLAERVKADHITFVSLLSAC-------------- 537

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKN 467
                                + SG +++ +K F+ +      + +L  Y  MVD   + 
Sbjct: 538 ---------------------SHSGLVDEGQKCFDIMQKEYGIKPSLKHYGCMVDLLGRA 576

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              EKA+EL   + +  +   A  + +LLS     G    G     R+++   E N   Y
Sbjct: 577 GYLEKAYEL---VRNMPIQPDASIWGALLSACKIYGNAELGTLASDRLLEVDSE-NVGYY 632

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNV---ISWTSMITG 564
             L ++Y+     E   +V     DR +     W+S++ G
Sbjct: 633 VLLSNIYANTEKWEGVIKVRSLARDRGLRKTPGWSSVVVG 672


>gi|449508249|ref|XP_004163262.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g33170-like [Cucumis sativus]
          Length = 840

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 281/785 (35%), Positives = 432/785 (55%), Gaps = 46/785 (5%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           +LD+  LL +     R     KL   +  R K        N +IS Y+  G+L EA K+F
Sbjct: 37  NLDSNQLLSELSKNGRVDEARKLFDQMPYRDKY-----TWNIMISAYANLGNLVEARKLF 91

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
                   I +WSS++S Y   G +V+ +  F +M   G  P++Y   +V+RACS    +
Sbjct: 92  NETPIXNSI-TWSSLVSGYCKNGCEVEGLRQFSQMWSDGQKPSQYTLGSVLRACSTLSLL 150

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G +I+ + +K    ++++ V   L+DM+ K    LE+ Y  F     KN V WT M+T
Sbjct: 151 HTGKMIHCYAIKIQ-LEANIFVATGLVDMYSKCKCLLEAEYLFFSLPDRKNYVQWTAMLT 209

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              Q G    AI+ F +M   G   + FT   +++AC+ +  +  G+Q+H   I +G   
Sbjct: 210 GYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGFGP 269

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           +V V  +LVDMYAKC   G +  +R + D M   +V+ W ++I G V  G  + EA+ LF
Sbjct: 270 NVYVQSALVDMYAKC---GDLASARMILDTMEIDDVVCWNSMIVGCVTHGYME-EALVLF 325

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M    +  + FT+ SVLK+  +  +  + E V++  +K G      V N+L+ MYA+ 
Sbjct: 326 HKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTGFDACKTVSNALVDMYAKQ 385

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G +  A   F  + +K+++S+ ++V  Y  N   EKA +L  ++    V    +  A + 
Sbjct: 386 GNLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACVF 445

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           S  + +  I  G Q+HA  IKS   S     N+LI+MY++C  +E A +V   ME RNVI
Sbjct: 446 SACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKCGCLEDAIRVXDSMETRNVI 505

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SWT++I G+A++                                   GL+  G  +F SM
Sbjct: 506 SWTAIIVGYAQN-----------------------------------GLVETGQSYFESM 530

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
              +GI    + YACM+DLLGR+G + EA   +  M +  D  +W++ L ACRVHG+ EL
Sbjct: 531 EKVYGIKPASDRYACMIDLLGRAGKINEAEHLLNRMDVEPDATIWKSLLSACRVHGNLEL 590

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
           G+ A + +++ +P +   ++LLSN+++ AG WE  A+IR+ MK   + +E G SWIE  +
Sbjct: 591 GERAGKNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKS 650

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           +VH F   + SHP   EIY+++D++ + IKE G++PD NF L +++EE K + L  HSEK
Sbjct: 651 QVHTFISEDRSHPLAAEIYSKIDEMMILIKEAGHVPDMNFALRDMDEEAKERSLAYHSEK 710

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +AVAFGL++ +K  PIR+FKNLRVCGDCH+A+KYIS +  R I+LRD N FHH  +GKCS
Sbjct: 711 LAVAFGLLTVAKGAPIRIFKNLRVCGDCHSAMKYISSIFKRHIILRDLNCFHHFIEGKCS 770

Query: 857 CNDYW 861
           C D+W
Sbjct: 771 CGDFW 775



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 158/535 (29%), Positives = 264/535 (49%), Gaps = 14/535 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P   T   +L++C      H GK++H    + +LE N  +   L+ +YSKC  
Sbjct: 125 MWSDGQKPSQYTLGSVLRACSTLSLLHTGKMIHCYAIKIQLEANIFVATGLVDMYSKCKC 184

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L EA  +F S+ ++++ V W++M++ Y   G+ + AI  F EM   G   N + F +++ 
Sbjct: 185 LLEAEYLFFSLPDRKNYVQWTAMLTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILT 244

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC++    A G  ++G ++  G F  +V V  AL+DM+ K   DL SA  + D M   + 
Sbjct: 245 ACTSISAYAFGRQVHGCIIWSG-FGPNVYVQSALVDMYAKCG-DLASARMILDTMEIDDV 302

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  MI  C   G   +A+ LF  M       D FT   V+ + +  +    G+ +HS 
Sbjct: 303 VCWNSMIVGCVTHGYMEEALVLFHKMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSL 362

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I+TG      V  +LVDMYAK    G++  +  VF+++LD +V+SWT+++TGYV +G  
Sbjct: 363 TIKTGFDACKTVSNALVDMYAK---QGNLSCALDVFNKILDKDVISWTSLVTGYVHNGFH 419

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           +K A++LF DM   +V  + F  A V  AC  L       QV+ + +K          NS
Sbjct: 420 EK-ALQLFCDMRTARVDLDQFVVACVFSACAELTVIEFGRQVHANFIKSSAGSLLSAENS 478

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT-GVGT 487
           LI+MYA+ G +EDA +  +S+  +N++S+  ++  YA+N   E        +E   G+  
Sbjct: 479 LITMYAKCGCLEDAIRVXDSMETRNVISWTAIIVGYAQNGLVETGQSYFESMEKVYGIKP 538

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           ++  +A ++      G I + E +  R+     E +  I+ +L+S      N+E   +  
Sbjct: 539 ASDRYACMIDLLGRAGKINEAEHLLNRM---DVEPDATIWKSLLSACRVHGNLELGERAG 595

Query: 548 K---EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI-KPNGITYIAVLS 598
           K   ++E  N + +  +   F+  G    A  I   M   GI +  G ++I + S
Sbjct: 596 KNLIKLEPSNSLPYVLLSNMFSVAGRWEDAAHIRRAMKTMGIXQEPGYSWIEMKS 650



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 172/317 (54%), Gaps = 6/317 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  +  +G   KAI     M  +G   +  T+  +L +C     +  G+ VH  +  S  
Sbjct: 208 LTGYAQNGESLKAIQCFKEMRNQGMESNHFTFPSILTACTSISAYAFGRQVHGCIIWSGF 267

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            PN  + ++L+ +Y+KCGDL  A  I  +M    D+V W+SMI   V  G   +A+ +F 
Sbjct: 268 GPNVYVQSALVDMYAKCGDLASARMILDTM-EIDDVVCWNSMIVGCVTHGYMEEALVLFH 326

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M       +++ + +V+++ ++ +N+ IG  ++   +K G FD+   V  AL+DM+ K 
Sbjct: 327 KMHNRDIRIDDFTYPSVLKSLASCKNLKIGESVHSLTIKTG-FDACKTVSNALVDMYAKQ 385

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             +L  A  VF+K+ +K+ + WT ++T     G    A++LF DM  +    D+F ++ V
Sbjct: 386 G-NLSCALDVFNKILDKDVISWTSLVTGYVHNGFHEKALQLFCDMRTARVDLDQFVVACV 444

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
            SAC+EL +   G+Q+H+  I++     +    SL+ MYAKC   G ++D+ +V D M  
Sbjct: 445 FSACAELTVIEFGRQVHANFIKSSAGSLLSAENSLITMYAKC---GCLEDAIRVXDSMET 501

Query: 350 HNVMSWTAIITGYVQSG 366
            NV+SWTAII GY Q+G
Sbjct: 502 RNVISWTAIIVGYAQNG 518


>gi|356519174|ref|XP_003528249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Glycine max]
          Length = 975

 Score =  510 bits (1313), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 288/843 (34%), Positives = 467/843 (55%), Gaps = 21/843 (2%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFT------LDLMTQKGNHPDLDTYS 82
           P  S   F A       L N L+     G  + A+F       L+L++     PD  T  
Sbjct: 144 PSDSRGVFDAAKEKDLFLYNALL----SGYSRNALFRDAISLFLELLSATDLAPDNFTLP 199

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            + K+C    +  LG+ VH+L  ++    ++ + N+LI++Y KCG +  A K+F++M N 
Sbjct: 200 CVAKACAGVADVELGEAVHALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRN- 258

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEML---ELGFCPNEYCFSAVIRACSNTENVAIG 199
           R++VSW+S++ +    G   +   +F  +L   E G  P+      VI AC+    V +G
Sbjct: 259 RNLVSWNSVMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMG 318

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            +++G   K G    +V V  +L+DM+ K    L  A  +FD    KN V W  +I   +
Sbjct: 319 MVVHGLAFKLG-ITEEVTVNNSLVDMYSKCGY-LGEARALFDMNGGKNVVSWNTIIWGYS 376

Query: 260 QLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           + G  R    L  +M     +  +  T+  V+ ACS      S K++H +A R G   D 
Sbjct: 377 KEGDFRGVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDE 436

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            V  + V  YAKC+   S+D + +VF  M    V SW A+I  + Q+G   K ++ LF  
Sbjct: 437 LVANAFVAAYAKCS---SLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGK-SLDLFLV 492

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M+   + P+ FT  S+L AC  L      ++++   ++ G  LD+ +G SL+S+Y +   
Sbjct: 493 MMDSGMDPDRFTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSS 552

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           M   +  F+ +  K+LV +N M+  +++N    +A +   ++   G+         +L  
Sbjct: 553 MLLGKLIFDKMENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGA 612

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            S + A+  G+++H+  +K+    +  +  ALI MY++C  +E +  +F  + +++   W
Sbjct: 613 CSQVSALRLGKEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVNEKDEAVW 672

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
             +I G+  HG   +A+E+F  M   G +P+  T++ VL AC+HAGL++EG K+   M +
Sbjct: 673 NVIIAGYGIHGHGLKAIELFELMQNKGGRPDSFTFLGVLIACNHAGLVTEGLKYLGQMQN 732

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
            +G+  ++EHYAC+VD+LGR+G LTEAL+ +  MP   D  +W + L +CR +GD E+G+
Sbjct: 733 LYGVKPKLEHYACVVDMLGRAGQLTEALKLVNEMPDEPDSGIWSSLLSSCRNYGDLEIGE 792

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
             ++ +LE +P     ++LLSNLYA  G W+ V  +R+RMKE  L K+AGCSWIE    V
Sbjct: 793 EVSKKLLELEPNKAENYVLLSNLYAGLGKWDEVRKVRQRMKENGLHKDAGCSWIEIGGMV 852

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           ++F V + S  ++ +I     +L  KI + GY PDT+ VLHELEEE K++ L  HSEK+A
Sbjct: 853 YRFLVSDGSLSESKKIQQTWIKLEKKISKIGYKPDTSCVLHELEEEGKIKILKSHSEKLA 912

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           ++FGL++T+K   +RV KNLR+C DCH AIK +S V  R+I++RD+ RFHH K+G C+C 
Sbjct: 913 ISFGLLNTAKGTTLRVCKNLRICVDCHNAIKLVSKVVKRDIIVRDNKRFHHFKNGLCTCG 972

Query: 859 DYW 861
           D+W
Sbjct: 973 DFW 975



 Score =  283 bits (724), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 186/663 (28%), Positives = 337/663 (50%), Gaps = 21/663 (3%)

Query: 22  NPSRQNLPPSSSPP--FIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLD 79
           N S    PP + P     +   T  P+  RL    + G +  A+  L    Q G     D
Sbjct: 30  NNSNNLFPPFTVPKSSLTSHTKTHSPILQRLHNLCDSGNLNDALNLLHSHAQNGTVSSSD 89

Query: 80  ----TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSKCGDLNEANK 134
                  +LL++C   +N H+G+ VH+L++ S    N V+L++ +I++YS CG  +++  
Sbjct: 90  ISKEAIGILLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRG 149

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNT 193
           +F +   ++D+  +++++S Y       DAI +F+E+L      P+ +    V +AC+  
Sbjct: 150 VFDA-AKEKDLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGV 208

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            +V +G  ++   LK G F SD  VG ALI M+ K    +ESA KVF+ M  +N V W  
Sbjct: 209 ADVELGEAVHALALKAGGF-SDAFVGNALIAMYGKCGF-VESAVKVFETMRNRNLVSWNS 266

Query: 254 MITRCTQLGCPRDAIRLFLDMILS---GFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           ++  C++ G   +   +F  +++S   G +PD  T+  V+ AC+ +     G  +H  A 
Sbjct: 267 VMYACSENGGFGECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMVVHGLAF 326

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           + G+  +V V  SLVDMY+KC   G + ++R +FD     NV+SW  II GY + G   +
Sbjct: 327 KLGITEEVTVNNSLVDMYSKC---GYLGEARALFDMNGGKNVVSWNTIIWGYSKEGDF-R 382

Query: 371 EAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
              +L  +M  + +V  N  T  +VL AC         ++++ +A + G   D+ V N+ 
Sbjct: 383 GVFELLQEMQREEKVRVNEVTVLNVLPACSGEHQLLSLKEIHGYAFRHGFLKDELVANAF 442

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           ++ YA+   ++ A + F  +  K + S+N ++ A+A+N    K+ +L   + D+G+    
Sbjct: 443 VAAYAKCSSLDCAERVFCGMEGKTVSSWNALIGAHAQNGFPGKSLDLFLVMMDSGMDPDR 502

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +T  SLL   + +  +  G++IH  ++++G E +  I  +L+S+Y +C+++     +F +
Sbjct: 503 FTIGSLLLACARLKFLRCGKEIHGFMLRNGLELDEFIGISLMSLYIQCSSMLLGKLIFDK 562

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           ME+++++ W  MITGF+++     AL+ F +ML+ GIKP  I    VL ACS    +  G
Sbjct: 563 MENKSLVCWNVMITGFSQNELPCEALDTFRQMLSGGIKPQEIAVTGVLGACSQVSALRLG 622

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
            K   S   +  + +       ++D+  + G + ++      +    D  VW   +    
Sbjct: 623 -KEVHSFALKAHLSEDAFVTCALIDMYAKCGCMEQSQNIFDRVN-EKDEAVWNVIIAGYG 680

Query: 670 VHG 672
           +HG
Sbjct: 681 IHG 683



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 142/285 (49%), Gaps = 7/285 (2%)

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEK 452
           +L+ACG+  + +V  +V+       +  +D V    +I+MY+  G   D+R  F++  EK
Sbjct: 98  LLRACGHHKNIHVGRKVHALVSASHKLRNDVVLSTRIIAMYSACGSPSDSRGVFDAAKEK 157

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +L  YN ++  Y++N     A  L  E +  T +    +T   +    + +  +  GE +
Sbjct: 158 DLFLYNALLSGYSRNALFRDAISLFLELLSATDLAPDNFTLPCVAKACAGVADVELGEAV 217

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA  +K+G  S+  + NALI+MY +C  VE+A +VF+ M +RN++SW S++   +++G  
Sbjct: 218 HALALKAGGFSDAFVGNALIAMYGKCGFVESAVKVFETMRNRNLVSWNSVMYACSENGGF 277

Query: 572 ARALEIFYKML---ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
                +F ++L    +G+ P+  T + V+ AC+  G +  G      +  + GI + +  
Sbjct: 278 GECCGVFKRLLISEEEGLVPDVATMVTVIPACAAVGEVRMGMV-VHGLAFKLGITEEVTV 336

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
              +VD+  + G L EA      M    +V+ W T +      GD
Sbjct: 337 NNSLVDMYSKCGYLGEARALF-DMNGGKNVVSWNTIIWGYSKEGD 380


>gi|357450795|ref|XP_003595674.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355484722|gb|AES65925.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 975

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 287/839 (34%), Positives = 478/839 (56%), Gaps = 14/839 (1%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFT-LDLMTQKGNHPDLDTYSLLLK 86
           P  S   F A    +  L N L+  +L +   + A+F  +++++     PD  T   ++K
Sbjct: 145 PYDSCLVFNASRRKNLFLWNALLSGYLRNSLFRDAVFVFVEMISLTEFVPDNFTLPCVIK 204

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C+   +  LG+ VH    ++K+  +  + N+LI++Y K G +  A K+F  M  +R++V
Sbjct: 205 ACVGVYDVRLGEAVHGFALKTKVLSDVFVGNALIAMYGKFGFVESAVKVFDKMP-QRNLV 263

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           SW+S++ + +  G   ++  +F  +L  + G  P+      VI  C+    V +G + +G
Sbjct: 264 SWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMVTVIPLCARQGEVRLGMVFHG 323

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
             LK G    ++ V  +L+DM+ K     E+  +V     EKN + W  MI   ++    
Sbjct: 324 LALKLG-LCGELKVNSSLLDMYSKCGYLCEA--RVLFDTNEKNVISWNSMIGGYSKDRDF 380

Query: 265 RDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGC 322
           R A  L   M +   +  +  TL  V+  C E   F   K++H +A+R G +  D  V  
Sbjct: 381 RGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFLKLKEIHGYALRHGFIQSDELVAN 440

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           + V  YAKC   GS+  +  VF  M    V SW A+I G+VQ+G   ++A+ L+  M   
Sbjct: 441 AFVAGYAKC---GSLHYAEGVFCGMESKMVSSWNALIGGHVQNG-FPRKALDLYLLMRGS 496

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            + P+ FT AS+L AC  L   +  ++++   ++ G  LD+ +  SL+S+Y + G++  A
Sbjct: 497 GLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDEFICISLVSLYVQCGKILLA 556

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           +  F+++ EKNLV +NTM++ +++N     A ++ H++  + +     +    L   S +
Sbjct: 557 KLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSSKIWPDEISIIGALGACSQV 616

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            A+  G+++H   +KS    +  +  +LI MY++C  +E +  +F  +  +  ++W  +I
Sbjct: 617 SALRLGKELHCFAVKSHLTEHSFVTCSLIDMYAKCGCMEQSQNIFDRVHLKGEVTWNVLI 676

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           TG+  HG   +A+E+F  M   G +P+ +T+IA+L+AC+HAGL++EG ++   M    GI
Sbjct: 677 TGYGIHGHGRKAIELFKSMQNAGFRPDSVTFIALLTACNHAGLVAEGLEYLGQMQSLFGI 736

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
             ++EHYAC+VD+LGR+G L EALE +  +P   D  +W + L +CR + D ++G+  A 
Sbjct: 737 KPKLEHYACVVDMLGRAGRLNEALELVNELPDKPDSRIWSSLLSSCRNYRDLDIGEKVAN 796

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            +LE  P     ++L+SN YA  G W+ V  +R+RMKE  L K+AGCSWIE   KV +F 
Sbjct: 797 KLLELGPDKAENYVLISNFYARLGKWDEVRKMRQRMKEIGLQKDAGCSWIEIGGKVSRFL 856

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
           VG+ S  ++++I     +L  KI + GY PDT+ VLHELEE++K++ L  HSEK+A++FG
Sbjct: 857 VGDESLLQSMKIQQTWIELEKKINKIGYKPDTSCVLHELEEDEKIKILRNHSEKLAISFG 916

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           L++T+K   +RV KNLR+C DCH AIK +S +  REI++RD+ RFHH K+G CSC DYW
Sbjct: 917 LLNTAKGTTLRVCKNLRICVDCHNAIKLVSKIDKREIIVRDNKRFHHFKNGFCSCGDYW 975



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 201/703 (28%), Positives = 354/703 (50%), Gaps = 51/703 (7%)

Query: 13  PPPSSFK---PSNPSRQNL----------PPSSS---PPFIAQPTTSEPLSNRLIYHLND 56
           PPP SF      N + QN+          PP SS    P I+     +  S       N 
Sbjct: 8   PPPLSFSFHHHHNLTLQNINNKIPFHSFTPPKSSHLFSPIISSHKKQQNASKHFHNLCNT 67

Query: 57  GRVQKAIFTL-----DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           G + +A   L     D+++   + P      LLL+ C   +N  +G+ +H+ ++ S    
Sbjct: 68  GNLNQAFNFLQSNLNDVVSSSNSKPK-QLIGLLLQLCGEYKNIEIGRKIHNFISTSPHFQ 126

Query: 112 NSVIL-NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           N V+L   L+++YS C    ++  +F +   ++++  W++++S Y+      DA+ +FVE
Sbjct: 127 NDVVLITRLVTMYSICDSPYDSCLVFNA-SRRKNLFLWNALLSGYLRNSLFRDAVFVFVE 185

Query: 171 MLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           M+ L  F P+ +    VI+AC    +V +G  ++GF LK     SDV VG ALI M+ K 
Sbjct: 186 MISLTEFVPDNFTLPCVIKACVGVYDVRLGEAVHGFALKTKVL-SDVFVGNALIAMYGKF 244

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS--GFLPDRFTLS 287
              +ESA KVFDKM ++N V W  ++  C + G   ++  LF  ++    G +PD  T+ 
Sbjct: 245 GF-VESAVKVFDKMPQRNLVSWNSVMYACLENGVFEESYGLFKGLLNGDEGLMPDVATMV 303

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V+  C+       G   H  A++ GL  ++ V  SL+DMY+KC   G + ++R +FD  
Sbjct: 304 TVIPLCARQGEVRLGMVFHGLALKLGLCGELKVNSSLLDMYSKC---GYLCEARVLFDTN 360

Query: 348 LDHNVMSWTAIITGYVQSGGRD-KEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSN 405
            + NV+SW ++I GY  S  RD + A +L   M ++ +V  N  T  +VL  C   +   
Sbjct: 361 -EKNVISWNSMIGGY--SKDRDFRGAFELLRKMQMEDKVKVNEVTLLNVLPVCEEEIQFL 417

Query: 406 VAEQVYTHAVKRGRAL-DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
             ++++ +A++ G    D+ V N+ ++ YA+ G +  A   F  +  K + S+N ++  +
Sbjct: 418 KLKEIHGYALRHGFIQSDELVANAFVAGYAKCGSLHYAEGVFCGMESKMVSSWNALIGGH 477

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
            +N    KA +L   +  +G+    +T ASLLS  + + ++  G++IH  ++++GFE + 
Sbjct: 478 VQNGFPRKALDLYLLMRGSGLEPDLFTIASLLSACARLKSLSCGKEIHGSMLRNGFELDE 537

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            I  +L+S+Y +C  +  A   F  ME++N++ W +MI GF+++ F   AL++F++ML+ 
Sbjct: 538 FICISLVSLYVQCGKILLAKLFFDNMEEKNLVCWNTMINGFSQNEFPFDALDMFHQMLSS 597

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWK----HFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
            I P+ I+ I  L ACS    +  G +      +S   EH  V        ++D+  + G
Sbjct: 598 KIWPDEISIIGALGACSQVSALRLGKELHCFAVKSHLTEHSFVT-----CSLIDMYAKCG 652

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            + ++      + L  +V  W   +    +HG    G+ A E+
Sbjct: 653 CMEQSQNIFDRVHLKGEV-TWNVLITGYGIHGH---GRKAIEL 691


>gi|32487551|emb|CAE03754.1| OSJNBa0013K16.3 [Oryza sativa Japonica Group]
          Length = 865

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 288/815 (35%), Positives = 445/815 (54%), Gaps = 80/815 (9%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           EPN +  N +++ Y+K G L++A ++F  M  +RD+ SW++++S Y    + +D +  FV
Sbjct: 68  EPNVITHNIMMNGYAKQGSLSDAEELFDRM-PRRDVASWNTLMSGYFQARRFLDGLETFV 126

Query: 170 EMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            M   G   PN + F  V+++C       +   + G   K  ++  D  V  AL+DMFV+
Sbjct: 127 SMHRSGDSLPNAFTFCCVMKSCGALGCRELAPQLLGLFWKFDFW-GDPDVETALVDMFVR 185

Query: 229 -GSVDLES-----------------------------AYKVFDKMTEKNTVGWTLMITRC 258
            G VD  S                             A + F+ M E++ V W +MI   
Sbjct: 186 CGYVDFASRLFSQIERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAAL 245

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           +Q G  R+A+ L ++M   G   D  T +  ++AC+ L     GKQLH+  IR+   +D 
Sbjct: 246 SQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDP 305

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            V  +L+++YAKC   GS  ++++VF+ + D N +SWT +I G +Q     K +V+LF+ 
Sbjct: 306 YVASALIELYAKC---GSFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSK-SVELFNQ 361

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    +A + F  A+++  C N +D  +  Q+++  +K G      V NSLIS+YA+ G 
Sbjct: 362 MRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGHNRAIVVSNSLISLYAKCGD 421

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL--------------------H 478
           +++A   F S+ E+++VS+ +M+ AY++  N  KA E                      H
Sbjct: 422 LQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAMLGAYIQH 481

Query: 479 EIEDTG------------VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             E+ G            V     T+ +L  G + IGA   G+QI    +K+G   N  +
Sbjct: 482 GAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGLILNVSV 541

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            NA I+MYS+C  +  A ++F  +  ++V+SW +MITG+++HG   +A + F  ML+ G 
Sbjct: 542 ANAAITMYSKCGRISEAQKLFDLLNGKDVVSWNAMITGYSQHGMGKQAAKTFDDMLSKGA 601

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+ I+Y+AVLS CSH+GL+ EG  +F  M   HGI   +EH++CMVDLLGR+G LTEA 
Sbjct: 602 KPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSCMVDLLGRAGHLTEAK 661

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           + I  MP+     VW   L AC++HG+ EL + AA+ + E D  D  +++LL+ +Y+ AG
Sbjct: 662 DLIDKMPMKPTAEVWGALLSACKIHGNDELAELAAKHVFELDSPDSGSYMLLAKIYSDAG 721

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
             +  A +RK M+++ + K  G SW+E +NKVH F   + SHP+ + I  ++D+L  KI 
Sbjct: 722 KSDDSAQVRKLMRDKGIKKNPGYSWMEVENKVHVFKADDVSHPQVIAIRNKMDELMEKIA 781

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             GY+             +  +    HSEK+AVAFG++S     PI + KNLR+CGDCHT
Sbjct: 782 HLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMKNLRICGDCHT 830

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IK IS VT RE V+RD  RFHH K G CSC DYW
Sbjct: 831 VIKLISSVTDREFVIRDGVRFHHFKSGSCSCGDYW 865



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 213/440 (48%), Gaps = 49/440 (11%)

Query: 48  NRLIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I  L+  GRV++A+  +  M +KG   D  TY+  L +C R  +   GK +H+ + R
Sbjct: 239 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 298

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S  + +  + ++LI LY+KCG   EA ++F S+   R+ VSW+ +I   +       ++ 
Sbjct: 299 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVE 357

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F +M       +++  + +I  C N  ++ +G  ++   LK G+ +  + V  +LI ++
Sbjct: 358 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLY 416

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL------------------------- 261
            K   DL++A  VF  M+E++ V WT MIT  +Q+                         
Sbjct: 417 AKCG-DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAML 475

Query: 262 ------GCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
                 G   D ++++  M+      PD  T   +   C+++     G Q+    ++ GL
Sbjct: 476 GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGL 535

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            L+V V  + + MY+KC   G + +++K+FD +   +V+SW A+ITGY Q  G  K+A K
Sbjct: 536 ILNVSVANAAITMYSKC---GRISEAQKLFDLLNGKDVVSWNAMITGYSQH-GMGKQAAK 591

Query: 375 LFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYT--HAVKRGRALDDCVGNSL 429
            F DM+     P++ ++ +VL  C   G + +  +   + T  H +  G     C    +
Sbjct: 592 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSC----M 647

Query: 430 ISMYARSGRMEDARKAFESL 449
           + +  R+G + +A+   + +
Sbjct: 648 VDLLGRAGHLTEAKDLIDKM 667



 Score = 46.2 bits (108), Expect = 0.084,   Method: Compositional matrix adjust.
 Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 1/92 (1%)

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK-E 549
             A  L    S GA+     +H R++  G  S   + N L+  Y  C  +  A ++ + +
Sbjct: 6   ALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRAD 65

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           +++ NVI+   M+ G+AK G  + A E+F +M
Sbjct: 66  IKEPNVITHNIMMNGYAKQGSLSDAEELFDRM 97


>gi|356529693|ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  509 bits (1312), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 268/682 (39%), Positives = 414/682 (60%), Gaps = 12/682 (1%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
           +S++I   ++T+++     ++  ++K G+  S   +G  LID ++K GS  L  A K+FD
Sbjct: 4   YSSLIAQSAHTKSLTTLRAVHTNVIKSGF--SYSFLGHKLIDGYIKCGS--LAEARKLFD 59

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           ++  ++ V W  MI+     G  ++A+  + +M++ G LPD +T S +  A S+L L   
Sbjct: 60  ELPSRHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRH 119

Query: 302 GKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           G++ H  A+  GL  LD  V  +LVDMYAK      + D+  VF R+L+ +V+ +TA+I 
Sbjct: 120 GQRAHGLAVVLGLEVLDGFVASALVDMYAKFD---KMRDAHLVFRRVLEKDVVLFTALIV 176

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY Q G  D EA+K+F DM+   V PN +T A +L  CGNL D    + ++   VK G  
Sbjct: 177 GYAQHG-LDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLE 235

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  SL++MY+R   +ED+ K F  L   N V++ + V    +N   E A  +  E+
Sbjct: 236 SVVASQTSLLTMYSRCNMIEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREM 295

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
               +  + +T +S+L   SS+  +  GEQIHA  +K G + N     ALI++Y +C N+
Sbjct: 296 IRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCGNM 355

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  VF  + + +V++  SMI  +A++GF   ALE+F ++   G+ PNG+T+I++L AC
Sbjct: 356 DKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILLAC 415

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++AGL+ EG + F S+ + H I   ++H+ CM+DLLGRS  L EA   I  +  + DV++
Sbjct: 416 NNAGLVEEGCQIFASIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR-NPDVVL 474

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           WRT L +C++HG+ E+ +     ILE  P D   HILL+NLYASAG W  V  ++  +++
Sbjct: 475 WRTLLNSCKIHGEVEMAEKVMSKILELAPGDGGTHILLTNLYASAGKWNQVIEMKSTIRD 534

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             L K    SW++ D +VH F  G+ SHP++LEI+  L  L  K+K  GY P+T FVL +
Sbjct: 535 LKLKKSPAMSWVDVDREVHTFMAGDLSHPRSLEIFEMLHGLMKKVKTLGYNPNTRFVLQD 594

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           L+EE+K+  L+ HSEK+A+A+ L  T  ++  IR+FKNLRVCGDCH+ IK++S++TGR+I
Sbjct: 595 LDEEKKISSLYYHSEKLAIAYALWKTIGRTTTIRIFKNLRVCGDCHSWIKFVSLLTGRDI 654

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           + RDS RFHH K G CSC DYW
Sbjct: 655 IARDSKRFHHFKGGLCSCKDYW 676



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 165/534 (30%), Positives = 294/534 (55%), Gaps = 21/534 (3%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           ++ YS L+     +++    + VH+ + +S     S + + LI  Y KCG L EA K+F 
Sbjct: 1   MNFYSSLIAQSAHTKSLTTLRAVHTNVIKSGF-SYSFLGHKLIDGYIKCGSLAEARKLFD 59

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            + + R IV+W+SMISS+++ GK  +A+  +  ML  G  P+ Y FSA+ +A S    + 
Sbjct: 60  ELPS-RHIVTWNSMISSHISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIR 118

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G   +G  +  G    D  V  AL+DM+ K    +  A+ VF ++ EK+ V +T +I  
Sbjct: 119 HGQRAHGLAVVLGLEVLDGFVASALVDMYAKFD-KMRDAHLVFRRVLEKDVVLFTALIVG 177

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G   +A+++F DM+  G  P+ +TL+ ++  C  L    +G+ +H   +++GL   
Sbjct: 178 YAQHGLDGEALKIFEDMVNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSGLESV 237

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V    SL+ MY++C +   ++DS KVF+++   N ++WT+ + G VQ+ GR++ AV +F 
Sbjct: 238 VASQTSLLTMYSRCNM---IEDSIKVFNQLDYANQVTWTSFVVGLVQN-GREEVAVSIFR 293

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           +MI+  ++PN FT +S+L+AC +L    V EQ++   +K G   +   G +LI++Y + G
Sbjct: 294 EMIRCSISPNPFTLSSILQACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKCG 353

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            M+ AR  F+ L E ++V+ N+M+ AYA+N    +A EL   +++ G+  +  TF S+L 
Sbjct: 354 NMDKARSVFDVLTELDVVAINSMIYAYAQNGFGHEALELFERLKNMGLVPNGVTFISILL 413

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCI------YNALISMYSRCANVEAAFQVFKEME 551
             ++ G + +G QI A I      +NH I      +  +I +  R   +E A  + +E+ 
Sbjct: 414 ACNNAGLVEEGCQIFASI-----RNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVR 468

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP-NGITYIAVLSACSHAG 604
           + +V+ W +++     HG    A ++  K+L   + P +G T+I + +  + AG
Sbjct: 469 NPDVVLWRTLLNSCKIHGEVEMAEKVMSKILE--LAPGDGGTHILLTNLYASAG 520



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 233/437 (53%), Gaps = 11/437 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP- 111
           H++ G+ ++A+     M  +G  PD  T+S + K+  +      G+  H L     LE  
Sbjct: 76  HISHGKSKEAVEFYGNMLMEGVLPDAYTFSAISKAFSQLGLIRHGQRAHGLAVVLGLEVL 135

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  + ++L+ +Y+K   + +A+ +F+ +  K D+V ++++I  Y   G   +A+ +F +M
Sbjct: 136 DGFVASALVDMYAKFDKMRDAHLVFRRVLEK-DVVLFTALIVGYAQHGLDGEALKIFEDM 194

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           +  G  PNEY  + ++  C N  ++  G +I+G ++K G  +S V    +L+ M+ + ++
Sbjct: 195 VNRGVKPNEYTLACILINCGNLGDLVNGQLIHGLVVKSG-LESVVASQTSLLTMYSRCNM 253

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E + KVF+++   N V WT  +    Q G    A+ +F +MI     P+ FTLS ++ 
Sbjct: 254 -IEDSIKVFNQLDYANQVTWTSFVVGLVQNGREEVAVSIFREMIRCSISPNPFTLSSILQ 312

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L +   G+Q+H+  ++ GL  +   G +L+++Y KC   G++D +R VFD + + +
Sbjct: 313 ACSSLAMLEVGEQIHAITMKLGLDGNKYAGAALINLYGKC---GNMDKARSVFDVLTELD 369

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V++  ++I  Y Q+ G   EA++LF  +    + PN  TF S+L AC N        Q++
Sbjct: 370 VVAINSMIYAYAQN-GFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIF 428

Query: 412 THAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
             +++    ++  + +   +I +  RS R+E+A    E +   ++V + T++++   +  
Sbjct: 429 A-SIRNNHNIELTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCKIHGE 487

Query: 470 SEKAFELLHEIEDTGVG 486
            E A +++ +I +   G
Sbjct: 488 VEMAEKVMSKILELAPG 504


>gi|15228590|ref|NP_187008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207453|sp|Q9SS60.1|PP210_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g03580
 gi|6091764|gb|AAF03474.1|AC009327_13 hypothetical protein [Arabidopsis thaliana]
 gi|28393735|gb|AAO42278.1| unknown protein [Arabidopsis thaliana]
 gi|29824355|gb|AAP04138.1| unknown protein [Arabidopsis thaliana]
 gi|332640438|gb|AEE73959.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 882

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 285/787 (36%), Positives = 453/787 (57%), Gaps = 9/787 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  ++K+C    +  +G LV+  +     E +  + N+L+ +YS+ G L  A ++
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M   RD+VSW+S+IS Y + G   +A+ ++ E+      P+ +  S+V+ A  N   
Sbjct: 164 FDEM-PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           V  G  ++GF LK G     V     L+ M++K     + A +VFD+M  +++V +  MI
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNN-GLVAMYLKFRRPTD-ARRVFDEMDVRDSVSYNTMI 280

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               +L    +++R+FL+  L  F PD  T+S V+ AC  L   +  K ++++ ++ G  
Sbjct: 281 CGYLKLEMVEESVRMFLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           L+  V   L+D+YAKC   G +  +R VF+ M   + +SW +II+GY+QSG    EA+KL
Sbjct: 340 LESTVRNILIDVYAKC---GDMITARDVFNSMECKDTVSWNSIISGYIQSGDL-MEAMKL 395

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  M+  +   +H T+  ++     L D    + ++++ +K G  +D  V N+LI MYA+
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAK 455

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G + D+ K F S+   + V++NT++ A  +  +     ++  ++  + V     TF   
Sbjct: 456 CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   +S+ A   G++IH  +++ G+ES   I NALI MYS+C  +E + +VF+ M  R+V
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           ++WT MI  +  +G   +ALE F  M   GI P+ + +IA++ ACSH+GL+ EG   F  
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M   + I   +EHYAC+VDLL RS  +++A EFI++MP+  D  +W + L ACR  GD E
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDME 695

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
             +  +  I+E +P DP   IL SN YA+   W+ V+ IRK +K++++ K  G SWIE  
Sbjct: 696 TAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVG 755

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL-EEEQKVQYLFQHS 794
             VH F  G+ S P++  IY  L+ L   + + GY+PD   V   L EEE+K + +  HS
Sbjct: 756 KNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHS 815

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           E++A+AFGL++T    P++V KNLRVCGDCH   K IS + GREI++RD+NRFH  KDG 
Sbjct: 816 ERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGT 875

Query: 855 CSCNDYW 861
           CSC D W
Sbjct: 876 CSCKDRW 882



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 109/398 (27%), Positives = 205/398 (51%), Gaps = 9/398 (2%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITG 361
           +++H+  I  GL         L+D Y+      S   S  VF R+    NV  W +II  
Sbjct: 24  RRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS---SLSVFRRVSPAKNVYLWNSIIRA 80

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + ++G    EA++ +  + + +V+P+ +TF SV+KAC  L D+ + + VY   +  G   
Sbjct: 81  FSKNG-LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  VGN+L+ MY+R G +  AR+ F+ +  ++LVS+N+++  Y+ +   E+A E+ HE++
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           ++ +   ++T +S+L    ++  + +G+ +H   +KSG  S   + N L++MY +     
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF EM+ R+ +S+ +MI G+ K      ++ +F + L D  KP+ +T  +VL AC 
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACG 318

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H   +S   K+  +   + G V        ++D+  + G +  A +   SM    D + W
Sbjct: 319 HLRDLSLA-KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME-CKDTVSW 376

Query: 662 RTFLGACRVHGD-TELGKHAAEMILEQDPQDPAAHILL 698
            + +      GD  E  K    M++ ++  D   +++L
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 95/358 (26%), Positives = 165/358 (46%), Gaps = 40/358 (11%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G + +A+    +M       D  TY +L+    R  +   GK +HS   +S +  +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+LI +Y+KCG++ ++ KIF SMG   D V+W+++IS+ V  G     + +  +M 
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATGLQVTTQMR 501

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +    P+   F   +  C++     +G  I+  LL+ GY +S++ +G ALI+M+ K    
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGC- 559

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LE++ +VF++M+ ++ V WT MI      G    A+  F DM  SG +PD      ++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS           HS  +  GLA            + K      +D        M++H  
Sbjct: 620 CS-----------HSGLVDEGLAC-----------FEKMKTHYKIDP-------MIEH-- 648

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
               A +   +    +  +A +    M    + P+   +ASVL+AC    D   AE+V
Sbjct: 649 ---YACVVDLLSRSQKISKAEEFIQAM---PIKPDASIWASVLRACRTSGDMETAERV 700



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 7/179 (3%)

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISW 558
           SS   + +  +IHA +I  G +S+      LI  YS      ++  VF+ +   +NV  W
Sbjct: 15  SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE--GWKHFRSM 616
            S+I  F+K+G    ALE + K+    + P+  T+ +V+ AC  AGL     G   +  +
Sbjct: 75  NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYEQI 132

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            D  G    +     +VD+  R G LT A +    MP+  D++ W + +     HG  E
Sbjct: 133 LD-MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYE 189


>gi|357167019|ref|XP_003580964.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Brachypodium distachyon]
          Length = 861

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 301/815 (36%), Positives = 466/815 (57%), Gaps = 52/815 (6%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK-SMGNKR 143
           L+    +R  H   L  +LL R    P   + N+L++ Y++CGDL+ A  +F  +  + R
Sbjct: 61  LRDSRSTRAIHGASLRRALLHR----PTPAVSNALLTAYARCGDLDAALALFAATPPDLR 116

Query: 144 DIVSWSSMISS---YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA--I 198
           D VS++S+IS+   +   G  +DA+   +   E+    + +   +V+ ACS+  +    +
Sbjct: 117 DAVSYNSLISALCLFRRWGHALDALRDMLADHEV----SSFTLVSVLLACSHLADQGHRL 172

Query: 199 GHIIYGFLLKCGYFDS--DVCVGCALIDMFVK-GSVDLESAYKVF--DKMTEKNTVGWTL 253
           G   + F LK G+ D   +     AL+ M+ + G VD   A ++F        + V W  
Sbjct: 173 GREAHAFALKHGFLDKGRERFPFNALLSMYARLGLVD--DAQRLFFSSGAGVGDLVTWNT 230

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           MI+   Q G   +A+++  DM+  G  PD  T +  + ACS LEL   G+++H++ ++  
Sbjct: 231 MISLLVQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDD 290

Query: 314 -LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH--NVMSWTAIITGYVQSGGRDK 370
            LA +  V  +LVDMYA    +  V  +R+VFD + +H   +  W A+I GY Q GG D+
Sbjct: 291 DLAANSFVASALVDMYAS---NEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDE 347

Query: 371 EAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           EA++LFS M  +   AP+  T A VL AC         E V+ + VKR  A +  V N+L
Sbjct: 348 EAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMASNRFVQNAL 407

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA-YAKNLNSEKAFELLHEIE------- 481
           + MYAR GRM++A   F  +  +++VS+NT++     + L SE AF+L+ E++       
Sbjct: 408 MDMYARLGRMDEAHTIFAMIDLRDIVSWNTLITGCIVQGLISE-AFQLVREMQLPSSAAS 466

Query: 482 --------DTGVG-----TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
                   DT V       +  T  +LL G + + A  +G++IH   ++   ES+  + +
Sbjct: 467 GETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGS 526

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IK 587
           AL+ MY++C  +  A  VF  +  RNVI+W  +I  +  HG    AL +F +M+A+G   
Sbjct: 527 ALVDMYAKCGCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALALFDRMVANGEAT 586

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           PN +T+IA L+ACSH+GL+  G + F+ M  ++G       +AC+VD+LGR+G L EA  
Sbjct: 587 PNEVTFIAALAACSHSGLVDRGLELFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAYG 646

Query: 648 FIRSM-PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            I SM P    V  W T LGACR+H + +LG+ AAE + E +P + + ++LL N+Y++AG
Sbjct: 647 IISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFELEPDEASHYVLLCNIYSAAG 706

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE    +R  M++R + KE GCSWIE D  +H+F  GE++HP++ +++A +D L  +++
Sbjct: 707 LWENSTEVRGMMRQRGVAKEPGCSWIELDGAIHRFMAGESAHPESAQVHAHMDALWERMR 766

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             GY+PDT+ VLH+++E +K   L  HSEK+A+AFGL+       IRV KNLRVC DCH 
Sbjct: 767 REGYVPDTSCVLHDVDEAEKAAMLRYHSEKLAIAFGLLRAPPGATIRVAKNLRVCNDCHE 826

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A K+IS + GREIVLRD  RFHH +DG CSC DYW
Sbjct: 827 AAKFISRMVGREIVLRDVRRFHHFRDGTCSCGDYW 861



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 226/462 (48%), Gaps = 49/462 (10%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS-LLTRSKLEPN 112
           +  GR ++A+  L  M   G  PD  T++  L +C R     +G+ VH+ +L    L  N
Sbjct: 236 VQGGRCEEAVQVLYDMVALGVRPDGVTFASALPACSRLELLGVGREVHAFVLKDDDLAAN 295

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGK-QVDAIHMFVE 170
           S + ++L+ +Y+    ++ A ++F  +  + R +  W++MI  Y   G    +AI +F  
Sbjct: 296 SFVASALVDMYASNEQVSHARRVFDMVPEHGRQLGMWNAMICGYAQHGGMDEEAIELFSR 355

Query: 171 M-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
           M  E G  P+E   + V+ AC+ +E       ++G+++K     S+  V  AL+DM+ + 
Sbjct: 356 MEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRD-MASNRFVQNALMDMYARL 414

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-----SG----- 278
           G +D   A+ +F  +  ++ V W  +IT C   G   +A +L  +M L     SG     
Sbjct: 415 GRMD--EAHTIFAMIDLRDIVSWNTLITGCIVQGLISEAFQLVREMQLPSSAASGETMLE 472

Query: 279 ----------FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
                      +P+  TL  ++  C+ L     GK++H +A+R  L  D+ VG +LVDMY
Sbjct: 473 GDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHALESDLAVGSALVDMY 532

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPN 387
           AKC   G +  +R VFDR+   NV++W  +I  Y   G  D EA+ LF  M+  G+  PN
Sbjct: 533 AKC---GCLALARAVFDRLPRRNVITWNVLIMAYGMHGLGD-EALALFDRMVANGEATPN 588

Query: 388 HFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDAR 443
             TF + L AC +  L+D  +        +KR    +    +   ++ +  R+GR+++A 
Sbjct: 589 EVTFIAALAACSHSGLVDRGLE---LFQGMKRDYGFEPTPYLHACVVDVLGRAGRLDEAY 645

Query: 444 KAFESLF--EKNLVSYNTMVDAYAKNLN-------SEKAFEL 476
               S+   E  + +++TM+ A   + N       +E+ FEL
Sbjct: 646 GIISSMAPGEHQVSAWSTMLGACRLHRNVKLGRIAAERLFEL 687



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 88/339 (25%), Positives = 157/339 (46%), Gaps = 43/339 (12%)

Query: 52  YHLNDGRVQKAIFTLDLM-TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
           Y  + G  ++AI     M  + G  P   T + +L +C RS  F   + VH  + +  + 
Sbjct: 339 YAQHGGMDEEAIELFSRMEAEAGCAPSETTMAGVLPACARSEVFTGKEAVHGYVVKRDMA 398

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            N  + N+L+ +Y++ G ++EA+ IF +M + RDIVSW+++I+  + +G   +A  +  E
Sbjct: 399 SNRFVQNALMDMYARLGRMDEAHTIF-AMIDLRDIVSWNTLITGCIVQGLISEAFQLVRE 457

Query: 171 M-------------------LELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           M                   ++   C PN      ++  C+     A G  I+G+ ++  
Sbjct: 458 MQLPSSAASGETMLEGDDTSVDGQRCMPNNITLMTLLPGCAVLAAPARGKEIHGYAVRHA 517

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             +SD+ VG AL+DM+ K    L  A  VFD++  +N + W ++I      G   +A+ L
Sbjct: 518 -LESDLAVGSALVDMYAKCGC-LALARAVFDRLPRRNVITWNVLIMAYGMHGLGDEALAL 575

Query: 271 FLDMILSG-FLPDRFTLSGVVSACSE-------LELFTSGKQLHSWAIRTGLALDVCVGC 322
           F  M+ +G   P+  T    ++ACS        LELF   K+   +       L  CV  
Sbjct: 576 FDRMVANGEATPNEVTFIAALAACSHSGLVDRGLELFQGMKR--DYGFEPTPYLHACV-- 631

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRML--DHNVMSWTAII 359
             VD+  +    G +D++  +   M   +H V +W+ ++
Sbjct: 632 --VDVLGRA---GRLDEAYGIISSMAPGEHQVSAWSTML 665


>gi|62320406|dbj|BAD94843.1| putative protein [Arabidopsis thaliana]
          Length = 720

 Score =  509 bits (1311), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 259/715 (36%), Positives = 428/715 (59%), Gaps = 7/715 (0%)

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W+ +++     G    +I +F +M+  G   + Y FS V ++ S+  +V  G  ++GF+L
Sbjct: 12  WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFIL 71

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           K G+ + +  VG +L+  ++K    ++SA KVFD+MTE++ + W  +I      G     
Sbjct: 72  KSGFGERN-SVGNSLVAFYLKNQ-RVDSARKVFDEMTERDVISWNSIINGYVSNGLAEKG 129

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           + +F+ M++SG   D  T+  V + C++  L + G+ +HS  ++   + +     +L+DM
Sbjct: 130 LSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCNTLLDM 189

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           Y+KC   G +D ++ VF  M D +V+S+T++I GY + G    EAVKLF +M +  ++P+
Sbjct: 190 YSKC---GDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-LAGEAVKLFEEMEEEGISPD 245

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            +T  +VL  C      +  ++V+    +     D  V N+L+ MYA+ G M++A   F 
Sbjct: 246 VYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGSMQEAELVFS 305

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-EDTGVGTSAYTFASLLSGASSIGAIG 506
            +  K+++S+NT++  Y+KN  + +A  L + + E+        T A +L   +S+ A  
Sbjct: 306 EMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLPACASLSAFD 365

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           KG +IH  I+++G+ S+  + N+L+ MY++C  +  A  +F ++  ++++SWT MI G+ 
Sbjct: 366 KGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYG 425

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            HGF   A+ +F +M   GI+ + I+++++L ACSH+GL+ EGW+ F  M  E  I   +
Sbjct: 426 MHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTV 485

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHYAC+VD+L R+G L +A  FI +MP+  D  +W   L  CR+H D +L +  AE + E
Sbjct: 486 EHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE 545

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            +P++   ++L++N+YA A  WE V  +RKR+ +R L K  GCSWIE   +V+ F  G++
Sbjct: 546 LEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIEIKGRVNIFVAGDS 605

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           S+P+T  I A L ++  ++ E GY P T + L + EE +K + L  HSEK+A+A G+IS+
Sbjct: 606 SNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGHSEKLAMALGIISS 665

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              K IRV KNLRVCGDCH   K++S +T REIVLRDSNRFH  KDG CSC  +W
Sbjct: 666 GHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDGHCSCRGFW 720



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 154/573 (26%), Positives = 282/573 (49%), Gaps = 20/573 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G    +I     M   G   D  T+S + KS    R+ H G+ +H  + +S     + + 
Sbjct: 23  GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 82

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSL++ Y K   ++ A K+F  M  +RD++SW+S+I+ YV+ G     + +FV+ML  G 
Sbjct: 83  NSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 141

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +     +V   C+++  +++G  ++   +K  +   D      L+DM+ K   DL+SA
Sbjct: 142 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN-TLLDMYSKCG-DLDSA 199

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             VF +M++++ V +T MI    + G   +A++LF +M   G  PD +T++ V++ C+  
Sbjct: 200 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 259

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L   GK++H W     L  D+ V  +L+DMYAKC   GS+ ++  VF  M   +++SW 
Sbjct: 260 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC---GSMQEAELVFSEMRVKDIISWN 316

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            II GY ++   + EA+ LF+ ++ + + +P+  T A VL AC +L   +   +++ + +
Sbjct: 317 TIIGGYSKNCYAN-EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 375

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + G   D  V NSL+ MYA+ G +  A   F+ +  K+LVS+  M+  Y  +   ++A  
Sbjct: 376 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 435

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI-----HARIIKSGFESNHCIYNAL 530
           L +++   G+     +F SLL   S  G + +G +      H   I+   E   CI    
Sbjct: 436 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI---- 491

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + M +R  ++  A++  + M    +   W +++ G   H     A ++  K+    ++P 
Sbjct: 492 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPE 549

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
              Y  +++         E  K  R    + G+
Sbjct: 550 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 582



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 231/448 (51%), Gaps = 22/448 (4%)

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FD++  +  + W +++    + G    +I LF  M+ SG   D +T S V  + S L   
Sbjct: 1   FDEVKIEKALFWNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSV 60

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+QLH + +++G      VG SLV  Y K   +  VD +RKVFD M + +V+SW +II
Sbjct: 61  HGGEQLHGFILKSGFGERNSVGNSLVAFYLK---NQRVDSARKVFDEMTERDVISWNSII 117

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            GYV +G  +K  + +F  M+   +  +  T  SV   C +    ++   V++  VK   
Sbjct: 118 NGYVSNGLAEK-GLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 176

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           + +D   N+L+ MY++ G ++ A+  F  + ++++VSY +M+  YA+   + +A +L  E
Sbjct: 177 SREDRFCNTLLDMYSKCGDLDSAKAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEE 236

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +E+ G+    YT  ++L+  +    + +G+++H  I ++    +  + NAL+ MY++C +
Sbjct: 237 MEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKCGS 296

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLS 598
           ++ A  VF EM  +++ISW ++I G++K+ +A  AL +F  +L +    P+  T   VL 
Sbjct: 297 MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVACVLP 356

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA------CMVDLLGRSGSLTEALEFIRSM 652
           AC+      +G        + HG + R  +++       +VD+  + G+L  A      +
Sbjct: 357 ACASLSAFDKG-------REIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDI 409

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHA 680
             S D++ W   +    +HG    GK A
Sbjct: 410 A-SKDLVSWTVMIAGYGMHG---FGKEA 433



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 188/349 (53%), Gaps = 12/349 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G  +K +     M   G   DL T   +   C  SR   LG+ VHS+  ++     
Sbjct: 120 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 179

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+L+ +YSKCGDL+ A  +F+ M + R +VS++SMI+ Y   G   +A+ +F EM 
Sbjct: 180 DRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEME 238

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           E G  P+ Y  +AV+  C+    +  G  ++ + +K      D+ V  AL+DM+ K GS 
Sbjct: 239 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGS- 296

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGV 289
            ++ A  VF +M  K+ + W  +I   ++     +A+ LF +++L    F PD  T++ V
Sbjct: 297 -MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACV 354

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + AC+ L  F  G+++H + +R G   D  V  SLVDMYAKC   G++  +  +FD +  
Sbjct: 355 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC---GALLLAHMLFDDIAS 411

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +++SWT +I GY    G  KEA+ LF+ M Q  +  +  +F S+L AC
Sbjct: 412 KDLVSWTVMIAGYGMH-GFGKEAIALFNQMRQAGIEADEISFVSLLYAC 459


>gi|115455659|ref|NP_001051430.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|24899461|gb|AAN65031.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|108711328|gb|ABF99123.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113549901|dbj|BAF13344.1| Os03g0775400 [Oryza sativa Japonica Group]
 gi|215741536|dbj|BAG98031.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 804

 Score =  509 bits (1310), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 269/704 (38%), Positives = 413/704 (58%), Gaps = 65/704 (9%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           +L+ MF K S  L  A  VF +M E++ V WT+M+    + G   +AI+  LDM   GF 
Sbjct: 103 SLLSMFAK-SGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--------- 331
           P +FTL+ V+S+C+  +    G+++HS+ ++ GL   V V  S+++MY KC         
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221

Query: 332 -------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
                              T  G +D +  +F+ M D +++SW A+I GY Q+G  D +A
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG-LDAKA 280

Query: 373 VKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           +KLFS M+ +  +AP+ FT  SVL AC NL +  + +QV+ + ++   A +  V N+LIS
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIS 340

Query: 432 MYARSGRMEDARK-------------AFESLFE--------------------KNLVSYN 458
            YA+SG +E+AR+             +F +L E                    +++V++ 
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 400

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  Y +N  +++A +L   +   G   ++YT A++LS  +S+  +  G+QIH R I+S
Sbjct: 401 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEI 577
             E +  + NA+I+MY+R  +   A ++F ++   +  I+WTSMI   A+HG    A+ +
Sbjct: 461 LLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +ML  G++P+ ITY+ VLSACSHAG ++EG +++  + +EH I   M HYACMVDLL 
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G  +EA EFIR MP+  D + W + L ACRVH + EL + AAE +L  DP +  A+  
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           ++N+Y++ G W   A I K  KE+ + KE G SW    +K+H F   +  HP+   +YA 
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
             ++  +IK  G++PD   VLH++++E K + L +HSEK+A+AFGLIST +   +RV KN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVC DCH AIK IS VT REI++RD+ RFHH +DG CSC DYW
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 162/574 (28%), Positives = 277/574 (48%), Gaps = 85/574 (14%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N    NSL+S+++K G L +A  +F  M  +RD VSW+ M+      G+  +AI   ++M
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEM-PERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK--- 228
              GF P ++  + V+ +C+ T+  A+G  ++ F++K G   S V V  ++++M+ K   
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGD 214

Query: 229 -----------------------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
                                        G +DL  A  +F+ M +++ V W  MI    
Sbjct: 215 SETATTVFERMPVRSVSSWNAMVSLNTHLGRMDL--AESLFESMPDRSIVSWNAMIAGYN 272

Query: 260 QLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           Q G    A++LF  M+  S   PD FT++ V+SAC+ L     GKQ+H++ +RT +A + 
Sbjct: 273 QNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNS 332

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRML--DHNVMSWTAIITGYVQSG---------- 366
            V  +L+  YAK    GSV+++R++ D+ +  D NV+S+TA++ GYV+ G          
Sbjct: 333 QVTNALISTYAK---SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFG 389

Query: 367 --------------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
                               GR+ EA+ LF  MI     PN +T A+VL  C +L   + 
Sbjct: 390 VMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDY 449

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYA 465
            +Q++  A++        V N++I+MYARSG    AR+ F+ + + K  +++ +M+ A A
Sbjct: 450 GKQIHCRAIRSLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALA 509

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS---GFES 522
           ++   E+A  L  E+   GV     T+  +LS  S  G + +G++ + +I        E 
Sbjct: 510 QHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEM 569

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKM 581
           +H  Y  ++ + +R      A +  + M  + + I+W S+++    H  A  A     K+
Sbjct: 570 SH--YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKL 627

Query: 582 LADGIKPN---GITYIA-VLSACSHAGLISEGWK 611
           L+  I PN     + IA V SAC      +  WK
Sbjct: 628 LS--IDPNNSGAYSAIANVYSACGRWSDAARIWK 659



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 254/575 (44%), Gaps = 114/575 (19%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR  +AI TL  MT  G  P   T + +L SC  ++   +G+ VHS + +  L     + 
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNK------------------------------RDIV 146
           NS++++Y KCGD   A  +F+ M  +                              R IV
Sbjct: 203 NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIV 262

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           SW++MI+ Y   G    A+ +F  ML E    P+E+  ++V+ AC+N  NV IG  ++ +
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322

Query: 206 LLKCGY-FDSDVCVGCALIDMFVK-GSV-------------------------------D 232
           +L+    ++S V    ALI  + K GSV                               D
Sbjct: 323 ILRTEMAYNSQVT--NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +ESA ++F  M  ++ V WT MI    Q G   +AI LF  MI  G  P+ +TL+ V+S 
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHN 351
           C+ L     GKQ+H  AIR+ L     V  +++ MYA+    GS   +R++FD++     
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYAR---SGSFPWARRMFDQVCWRKE 497

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++WT++I    Q  G+ +EAV LF +M++  V P+  T+  VL AC             
Sbjct: 498 TITWTSMIVALAQH-GQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC------------- 543

Query: 412 THA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +HA  V  G+   D + N                   E      +  Y  MVD  A+   
Sbjct: 544 SHAGFVNEGKRYYDQIKN-------------------EHQIAPEMSHYACMVDLLARAGL 584

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A E +  +    V   A  + SLLS A  +    +  ++ A  + S   +N   Y+A
Sbjct: 585 FSEAQEFIRRMP---VEPDAIAWGSLLS-ACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNV-----ISWT 559
           + ++YS C     A +++K  +++ V      SWT
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 51/411 (12%)

Query: 36  FIAQPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRN 93
           F + P  S    N +I   N +G   KA+     M  + +  PD  T + +L +C    N
Sbjct: 253 FESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGN 312

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG-------------------------- 127
             +GK VH+ + R+++  NS + N+LIS Y+K G                          
Sbjct: 313 VRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL 372

Query: 128 -------DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
                  D+  A ++F  M N RD+V+W++MI  Y   G+  +AI +F  M+  G  PN 
Sbjct: 373 EGYVKIGDMESAREMFGVM-NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNS 431

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           Y  +AV+  C++   +  G  I+   ++    +    V  A+I M+ + S     A ++F
Sbjct: 432 YTLAAVLSVCASLACLDYGKQIHCRAIR-SLLEQSSSVSNAIITMYAR-SGSFPWARRMF 489

Query: 241 DKMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           D++   K T+ WT MI    Q G   +A+ LF +M+ +G  PDR T  GV+SACS     
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549

Query: 300 TSGKQLHSWAIRT--GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWT 356
             GK+ +   I+    +A ++     +VD+ A+    G   ++++   RM ++ + ++W 
Sbjct: 550 NEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARA---GLFSEAQEFIRRMPVEPDAIAWG 605

Query: 357 AIITG-YVQSGGRDKE--AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           ++++   V       E  A KL S  I    +  +   A+V  ACG   D+
Sbjct: 606 SLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIANVYSACGRWSDA 654



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 74/286 (25%), Positives = 136/286 (47%), Gaps = 34/286 (11%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           NSL+SM+A+SGR+ DAR  F  + E++ VS+  MV    +     +A + L ++   G  
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + +T  ++LS  +   A   G ++H+ ++K G  S   + N++++MY +C + E A  V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTV 221

Query: 547 FKE-------------------------------MEDRNVISWTSMITGFAKHGFAARAL 575
           F+                                M DR+++SW +MI G+ ++G  A+AL
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 576 EIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           ++F +ML +  + P+  T  +VLSAC++ G +  G K   +      +    +    ++ 
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG-KQVHAYILRTEMAYNSQVTNALIS 340

Query: 635 LLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGDTELGKH 679
              +SGS+  A   + +SM    +V+ +   L      GD E  + 
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESARE 386



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 49/238 (20%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGF------------------------------- 520
           +A LL    +    G G  IHAR +K+G                                
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 521 ------ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
                   N   +N+L+SM+++   +  A  VF EM +R+ +SWT M+ G  + G    A
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148

Query: 575 LEIFYKMLADGIKPNGITYIAVLSAC--SHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           ++    M ADG  P   T   VLS+C  + AG +    +   S   + G+   +     +
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG---RKVHSFVVKLGLGSCVPVANSV 205

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK-HAAEMILEQDP 689
           +++ G+ G    A      MP+ + V  W        V  +T LG+   AE + E  P
Sbjct: 206 LNMYGKCGDSETATTVFERMPVRS-VSSWNAM-----VSLNTHLGRMDLAESLFESMP 257


>gi|357131877|ref|XP_003567560.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 808

 Score =  508 bits (1309), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 276/741 (37%), Positives = 426/741 (57%), Gaps = 13/741 (1%)

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CGDL+ A  +F  +     I  ++++I +Y  RG  +               PN Y F  
Sbjct: 76  CGDLSLARHLFDQIPAP-GIHDYNALIRAYSLRGPALALRLYRSLRRRRLPQPNNYTFPF 134

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V++ACS   ++     ++    + G   +D+ V  AL+D++ K       A  VF +M  
Sbjct: 135 VLKACSALLDLRSARAVHCHAARAG-LHADLFVSTALVDVYAK-CASFRHAATVFRRMPA 192

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++ V W  M+      G   D I   L ++     P+  TL  ++   ++    + G+ +
Sbjct: 193 RDVVAWNAMLAGYALHGKYSDTIACLL-LMQDDHAPNASTLVALLPLLAQHGALSQGRAV 251

Query: 306 HSWAIRTGLALD----VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           H++++R     D    V VG +L+DMYAKC   G +  + +VF+ M   N ++W+A++ G
Sbjct: 252 HAYSVRACSLHDHKDGVLVGTALLDMYAKC---GHLVYASRVFEAMAVRNEVTWSALVGG 308

Query: 362 YVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           +V  G R  EA  LF DM+ QG    +  + AS L+AC NL D  + +Q++    K G  
Sbjct: 309 FVLCG-RMLEAFSLFKDMLAQGLCFLSPTSVASALRACANLSDLCLGKQLHALLAKSGLH 367

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            D   GNSL+SMYA++G ++ A   F+ +  K+ VSY+ +V  Y +N  +++AF +  ++
Sbjct: 368 TDLTAGNSLLSMYAKAGLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKADEAFRVFRKM 427

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +   V     T  SL+   S + A+  G+  H  +I  G  S   I NALI MY++C  +
Sbjct: 428 QACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALIDMYAKCGRI 487

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + + Q+F  M  R+++SW +MI G+  HG    A  +F  M     +P+ +T+I ++SAC
Sbjct: 488 DLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDVTFICLISAC 547

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SH+GL++EG + F  M  ++GI  RMEHY  MVDLL R G L EA +FI+ MPL ADV V
Sbjct: 548 SHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQGMPLKADVRV 607

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W   LGACRVH + +LGK  + MI +  P+     +LLSN++++AG ++  A +R   KE
Sbjct: 608 WGALLGACRVHKNIDLGKQVSSMIQQLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKE 667

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           +   K  GCSWIE +  +H F  G+ SH ++ EIY ELD + + I + GY  DT+FVL +
Sbjct: 668 QGFKKSPGCSWIEINGSLHAFIGGDRSHAQSSEIYQELDNILVDINKLGYRADTSFVLQD 727

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +EEE+K + L  HSEK+A+AFG+++ S+ K I V KNLRVCGDCHT IKY+++V  R I+
Sbjct: 728 VEEEEKEKALLYHSEKLAIAFGVLTLSEDKTIFVTKNLRVCGDCHTVIKYMTLVRKRAII 787

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD+NRFHH K+G+CSC D+W
Sbjct: 788 VRDANRFHHFKNGQCSCGDFW 808



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/500 (27%), Positives = 253/500 (50%), Gaps = 15/500 (3%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+  +LK+C    +    + VH    R+ L  +  +  +L+ +Y+KC     A  +
Sbjct: 127 PNNYTFPFVLKACSALLDLRSARAVHCHAARAGLHADLFVSTALVDVYAKCASFRHAATV 186

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ M   RD+V+W++M++ Y   GK  D I   + M +    PN     A++   +    
Sbjct: 187 FRRM-PARDVVAWNAMLAGYALHGKYSDTIACLLLMQD-DHAPNASTLVALLPLLAQHGA 244

Query: 196 VAIGHIIYGFLLK-CGYFD--SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
           ++ G  ++ + ++ C   D    V VG AL+DM+ K    L  A +VF+ M  +N V W+
Sbjct: 245 LSQGRAVHAYSVRACSLHDHKDGVLVGTALLDMYAKCG-HLVYASRVFEAMAVRNEVTWS 303

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
            ++      G   +A  LF DM+  G  FL    +++  + AC+ L     GKQLH+   
Sbjct: 304 ALVGGFVLCGRMLEAFSLFKDMLAQGLCFLSPT-SVASALRACANLSDLCLGKQLHALLA 362

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           ++GL  D+  G SL+ MYAK    G +D +  +FD+M+  + +S++A+++GYVQ+G  D 
Sbjct: 363 KSGLHTDLTAGNSLLSMYAKA---GLIDQATTLFDQMVVKDTVSYSALVSGYVQNGKAD- 418

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA ++F  M    V P+  T  S++ AC +L      +  +   + RG A +  + N+LI
Sbjct: 419 EAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASETSICNALI 478

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            MYA+ GR++ +R+ F+ +  +++VS+NTM+  Y  +   ++A  L  +++         
Sbjct: 479 DMYAKCGRIDLSRQIFDVMPARDIVSWNTMIAGYGIHGLGKEATALFLDMKHQACEPDDV 538

Query: 491 TFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           TF  L+S  S  G + +G++  H    K G       Y  ++ + +R   ++ A+Q  + 
Sbjct: 539 TFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHYIGMVDLLARGGFLDEAYQFIQG 598

Query: 550 MEDR-NVISWTSMITGFAKH 568
           M  + +V  W +++     H
Sbjct: 599 MPLKADVRVWGALLGACRVH 618



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 99/214 (46%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G+  +A      M      PD+ T   L+ +C        GK  H  +    +   
Sbjct: 411 YVQNGKADEAFRVFRKMQACNVQPDVATMVSLIPACSHLAALQHGKCGHGSVIVRGIASE 470

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I N+LI +Y+KCG ++ + +IF  M   RDIVSW++MI+ Y   G   +A  +F++M 
Sbjct: 471 TSICNALIDMYAKCGRIDLSRQIFDVM-PARDIVSWNTMIAGYGIHGLGKEATALFLDMK 529

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG----HII---YGFLLKCGYFDSDVCVGCALIDM 225
                P++  F  +I ACS++  V  G    H++   YG   +  ++         ++D+
Sbjct: 530 HQACEPDDVTFICLISACSHSGLVTEGKRWFHMMAHKYGITPRMEHY-------IGMVDL 582

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
             +G   L+ AY+    M  K  V  W  ++  C
Sbjct: 583 LARGGF-LDEAYQFIQGMPLKADVRVWGALLGAC 615


>gi|449492963|ref|XP_004159154.1| PREDICTED: uncharacterized protein LOC101226880 [Cucumis sativus]
          Length = 1725

 Score =  508 bits (1308), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 261/634 (41%), Positives = 383/634 (60%), Gaps = 16/634 (2%)

Query: 237  YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            YK  DK    N   W  +I    + G   +A+R F  +   G +P R +    + +CS L
Sbjct: 1099 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 1155

Query: 297  ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                SG+  H  A   G   D+ V  +L+DMY+KC   G + D+R +FD +   NV+SWT
Sbjct: 1156 CDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKC---GQLKDARALFDEIPLRNVVSWT 1212

Query: 357  AIITGYVQSGGRDKEAVKLFSDMIQGQ--------VAPNHFTFASVLKACGNLLDSNVAE 408
            ++ITGYVQ+   D  A+ LF D ++ +        V  +     SVL AC  +    + E
Sbjct: 1213 SMITGYVQNEQAD-NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 1271

Query: 409  QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
             V+   VK+G      VGN+L+  YA+ G+   ++K F+ + EK+ +S+N+M+  YA++ 
Sbjct: 1272 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 1331

Query: 469  NSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
             S +A E+ H  +   GV  +A T +++L   +  GA+  G+ IH ++IK   E N C+ 
Sbjct: 1332 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 1391

Query: 528  NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
             ++I MY +C  VE A + F  M+++NV SWT+M+ G+  HG A  AL+IFYKM+  G+K
Sbjct: 1392 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 1451

Query: 588  PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            PN IT+++VL+ACSHAGL+ EGW  F +M  ++ I   +EHY CMVDL GR+G L EA  
Sbjct: 1452 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 1511

Query: 648  FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
             I+ M +  D +VW + LGACR+H + +LG+ AA+ + E DP +   ++LLSNLYA AG 
Sbjct: 1512 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 1571

Query: 708  WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
            W  V  +R  MK R L+K  G S +E   +VH F VG+  HP    IY  L++L L++++
Sbjct: 1572 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQK 1631

Query: 768  FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
             GY+P+   VLH+++EE+K   L  HSEK+AVAFG+++++    I + KNLRVCGDCHT 
Sbjct: 1632 IGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTV 1691

Query: 828  IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IK IS +  R+ V+RDS RFHH KDG CSC DYW
Sbjct: 1692 IKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 1725



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 190/380 (50%), Gaps = 35/380 (9%)

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
           F   +Q+H+  IR+GL+ D  +   L+ +Y   +  G +  +  +F ++ +    +W  I
Sbjct: 40  FKHLRQIHAKIIRSGLSNDQLLTRKLIHLY---STHGRIAYAILLFYQIQNPCTFTWNLI 96

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I     +G   ++A+ L+ +M+   +A + FTF  V+KAC N L  ++ + V+   +K G
Sbjct: 97  IRANTING-LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155

Query: 419 RALDDCVGNSLISMYARSGR-------------------------------MEDARKAFE 447
            + D  V N+LI  Y + G                                +++AR+ F+
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            +  KN+VS+  M++ Y +N   E+A EL   ++   +  + YT  SL+   + +G +  
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G  IH   IK+  E    +  ALI MYS+C +++ A +VF+ M  +++ +W SMIT    
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG    AL +F +M    +KP+ IT+I VL AC H   + EG  +F  M   +GI    E
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395

Query: 628 HYACMVDLLGRSGSLTEALE 647
           HY CM +L  RS +L EA +
Sbjct: 396 HYECMTELYARSNNLDEAFK 415



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 227/441 (51%), Gaps = 31/441 (7%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
            G   +A+     + + G  P   ++   +KSC    +   G++ H        E +  + 
Sbjct: 1121 GDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVS 1180

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-- 174
            ++LI +YSKCG L +A  +F  +   R++VSW+SMI+ YV   +  +A+ +F + LE   
Sbjct: 1181 SALIDMYSKCGQLKDARALFDEI-PLRNVVSWTSMITGYVQNEQADNALLLFKDFLEEET 1239

Query: 175  ------GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
                      +     +V+ ACS      I   ++GF++K G FD  + VG  L+D + K
Sbjct: 1240 EVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG-FDGSIGVGNTLMDAYAK 1298

Query: 229  GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLS 287
                L S  KVFD M EK+ + W  MI    Q G   +A+ +F  M+   G   +  TLS
Sbjct: 1299 CGQPLVSK-KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLS 1357

Query: 288  GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
             V+ AC+      +GK +H   I+  L  +VCVG S++DMY KC   G V+ ++K FDRM
Sbjct: 1358 AVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC---GRVEMAKKTFDRM 1414

Query: 348  LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
             + NV SWTA++ GY    GR KEA+ +F  M++  V PN+ TF SVL AC +   + + 
Sbjct: 1415 KEKNVKSWTAMVAGYGMH-GRAKEALDIFYKMVRAGVKPNYITFVSVLAACSH---AGLV 1470

Query: 408  EQVYT--HAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVD 462
            E+ +   +A+K    ++  + +   ++ ++ R+G + +A    + +  + + V + +++ 
Sbjct: 1471 EEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYNLIKRMKMKPDFVVWGSLLG 1530

Query: 463  A--YAKNLN-----SEKAFEL 476
            A    KN++     ++K FEL
Sbjct: 1531 ACRIHKNVDLGEIAAQKLFEL 1551



 Score =  184 bits (466), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 127/437 (29%), Positives = 222/437 (50%), Gaps = 25/437 (5%)

Query: 141  NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            +K ++ SW+S+I+     G  V+A+  F  + +LG  P    F   I++CS   ++  G 
Sbjct: 1103 DKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGR 1162

Query: 201  IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            + +      G F++D+ V  ALIDM+ K    L+ A  +FD++  +N V WT MIT   Q
Sbjct: 1163 MSHQQAFVFG-FETDLFVSSALIDMYSKCG-QLKDARALFDEIPLRNVVSWTSMITGYVQ 1220

Query: 261  LGCPRDAIRLFLDMIL-------SGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
                 +A+ LF D +           +P D   +  V+SACS +      + +H + ++ 
Sbjct: 1221 NEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKK 1280

Query: 313  GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            G    + VG +L+D YAKC   G    S+KVFD M + + +SW ++I  Y QS G   EA
Sbjct: 1281 GFDGSIGVGNTLMDAYAKC---GQPLVSKKVFDWMEEKDDISWNSMIAVYAQS-GLSGEA 1336

Query: 373  VKLFSDMIQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            +++F  M++   V  N  T ++VL AC +       + ++   +K     + CVG S+I 
Sbjct: 1337 LEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIID 1396

Query: 432  MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
            MY + GR+E A+K F+ + EKN+ S+  MV  Y  +  +++A ++ +++   GV  +  T
Sbjct: 1397 MYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYIT 1456

Query: 492  FASLLSGASSIGAIGKG-----EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            F S+L+  S  G + +G        H   I+ G E     Y  ++ ++ R   +  A+ +
Sbjct: 1457 FVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLNEAYNL 1512

Query: 547  FKEMEDR-NVISWTSMI 562
             K M+ + + + W S++
Sbjct: 1513 IKRMKMKPDFVVWGSLL 1529



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 199/394 (50%), Gaps = 40/394 (10%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            LL++C   +NF   + +H+ + RS L  + ++   LI LYS  G +  A  +F  + N 
Sbjct: 32  FLLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
               +W+ +I +    G    A+ ++  M+  G   +++ F  VI+AC+N  ++ +G ++
Sbjct: 89  CTF-TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVV 147

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK---------------------------GSV---D 232
           +G L+K G F  DV V   LID + K                           G +   D
Sbjct: 148 HGSLIKYG-FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGD 206

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A ++FD++  KN V WT MI    +   P +A+ LF  M      P+ +T+  ++ A
Sbjct: 207 LQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKA 266

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+E+ + T G+ +H +AI+  + + V +G +L+DMY+KC   GS+ D+ +VF+ M   ++
Sbjct: 267 CTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC---GSIKDAIEVFETMPRKSL 323

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +W ++IT  +   G  +EA+ LFS+M +  V P+  TF  VL AC ++ +       +T
Sbjct: 324 PTWNSMITS-LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFT 382

Query: 413 HAVKR-GRALDDCVGNSLISMYARSGRMEDARKA 445
              +  G A        +  +YARS  +++A K+
Sbjct: 383 RMTQHYGIAPIPEHYECMTELYARSNNLDEAFKS 416



 Score =  147 bits (372), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/344 (27%), Positives = 168/344 (48%), Gaps = 30/344 (8%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +F ++    T  W L+I   T  G    A+ L+ +M+  G   D+FT   V+ AC+ 
Sbjct: 78  AILLFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTN 137

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC----------------------TV 333
                 GK +H   I+ G + DV V  +L+D Y KC                      TV
Sbjct: 138 FLSIDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTV 197

Query: 334 D------GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
                  G + ++R++FD +   NV+SWTA+I GY+++  + +EA++LF  M    + PN
Sbjct: 198 ISGLISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQ-QPEEALELFKRMQAENIFPN 256

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            +T  S++KAC  +    +   ++ +A+K    +   +G +LI MY++ G ++DA + FE
Sbjct: 257 EYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFE 316

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
           ++  K+L ++N+M+ +   +   ++A  L  E+E   V   A TF  +L     I  + +
Sbjct: 317 TMPRKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKE 376

Query: 508 GEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           G     R+ +  G       Y  +  +Y+R  N++ AF+  KE+
Sbjct: 377 GCAYFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 186/423 (43%), Gaps = 70/423 (16%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            Q++   ++ G + D  +   LI +Y+  GR+  A   F  +      ++N ++ A   N
Sbjct: 44  RQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPCTFTWNLIIRANTIN 103

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
             SE+A  L   +   G+    +TF  ++   ++  +I  G+ +H  +IK GF  +  + 
Sbjct: 104 GLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFVQ 163

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWT---------------------------- 559
           N LI  Y +C +   A +VF++M  RNV+SWT                            
Sbjct: 164 NNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSKNVV 223

Query: 560 ---SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
              +MI G+ ++     ALE+F +M A+ I PN  T ++++ AC+  G+++ G    R +
Sbjct: 224 SWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLG----RGI 279

Query: 617 YD---EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
           +D   ++ I   +     ++D+  + GS+ +A+E   +MP  + +  W + + +  VHG 
Sbjct: 280 HDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LPTWNSMITSLGVHG- 337

Query: 674 TELGKHAAEMILEQDPQD--PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
             LG+ A  +  E +  +  P A   +  L A      ++ N+++           GC++
Sbjct: 338 --LGQEALNLFSEMERVNVKPDAITFIGVLCACV----HIKNVKE-----------GCAY 380

Query: 732 IEADNKVHKFHVGETSHPK----TLEIYAE---LDQLALKIKEFGYLPDTNFVLHELEEE 784
                +    H G    P+      E+YA    LD+     KE G L ++  +  +   +
Sbjct: 381 FTRMTQ----HYGIAPIPEHYECMTELYARSNNLDEAFKSTKEVGSLANSPSICFDARAK 436

Query: 785 QKV 787
           Q V
Sbjct: 437 QAV 439



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 36/279 (12%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+     M  +G   D  T+  ++K+C    +  LGK+VH  L +     +  +
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 116 LNSLISLYSK-------------------------------CGDLNEANKIFKSMGNKRD 144
            N+LI  Y K                               CGDL EA +IF  + +K +
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK-N 221

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           +VSW++MI+ Y+   +  +A+ +F  M      PNEY   ++I+AC+    + +G  I+ 
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281

Query: 205 FLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           + +K    +  V +G ALIDM+ K GS+  + A +VF+ M  K+   W  MIT     G 
Sbjct: 282 YAIK-NCIEIGVYLGTALIDMYSKCGSI--KDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
            ++A+ LF +M      PD  T  GV+ AC  ++    G
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 10/160 (6%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ + + ++A+     M  +   P+  T   L+K+C       LG+ +H    ++ +E  
Sbjct: 232 YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIG 291

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +LI +YSKCG + +A ++F++M  ++ + +W+SMI+S    G   +A+++F EM 
Sbjct: 292 VYLGTALIDMYSKCGSIKDAIEVFETM-PRKSLPTWNSMITSLGVHGLGQEALNLFSEME 350

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
            +   P+   F  V+ AC + +NV  G         C YF
Sbjct: 351 RVNVKPDAITFIGVLCACVHIKNVKEG---------CAYF 381


>gi|449451241|ref|XP_004143370.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  507 bits (1306), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 307/889 (34%), Positives = 478/889 (53%), Gaps = 71/889 (7%)

Query: 16  SSFKPSNPSRQNLPPSSSPP--FIAQP----TTSEPLSNRLIYHLNDGRVQKAIFTLDLM 69
           +S   SNP+    P +S+ P  F   P    + SEPL      + +   +      L L 
Sbjct: 48  TSLSLSNPNPCLRPFNSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFDLLRLS 107

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
           T+ G+ PDL                   + VH+     KLE +  + N+LIS Y K G +
Sbjct: 108 TRYGD-PDL------------------ARAVHAQFL--KLEEDIFLGNALISAYLKLGLV 146

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
            +A+K+F  +    ++VS++++IS +     + +A+ +F  ML+ G  PNEY F A++ A
Sbjct: 147 RDADKVFSGLSCP-NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTA 205

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNT 248
           C    +  +G  ++G ++K G   S V +  AL+ ++ K G +DL    ++F++M E++ 
Sbjct: 206 CIRNMDYQLGSQVHGIVVKLGLL-SCVFICNALMGLYCKCGFLDL--VLRLFEEMPERDI 262

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
             W  +I+   +     +A   F  M L  G   D F+LS +++AC+       G+QLH+
Sbjct: 263 TSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHA 322

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            A++ GL   + V  SL+  Y KC   GS +D   +F+ M   +V++WT +IT Y++ G 
Sbjct: 323 LALKVGLESHLSVSSSLIGFYTKC---GSANDVTDLFETMPIRDVITWTGMITSYMEFGM 379

Query: 368 RD------------------------------KEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            D                                A++LF +M++  V  +  T  S++ A
Sbjct: 380 LDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITA 439

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF--ESLFEKNLV 455
           CG L    V++Q+    +K G   + C+  +L+ MY R GRMEDA K F   SL      
Sbjct: 440 CGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTA 499

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
              +M+  YA+N    +A  L H  +  G +        S+LS   SIG    G+Q+H  
Sbjct: 500 MLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGKQMHCH 559

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
            +KSG  +   + NA +SMYS+C N++ A +VF  M  ++++SW  ++ G   H    +A
Sbjct: 560 ALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKA 619

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHA--GLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           L I+ KM   GIKP+ IT+  ++SA  H    L+      F SM  EH I   +EHYA  
Sbjct: 620 LGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASF 679

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           + +LGR G L EA + IR+MPL  DV VWR  L +CR++ +  L K AA  IL  +P+DP
Sbjct: 680 ISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDP 739

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
            ++IL SNLY+++G W Y   +R+ M+E+   K    SWI  +NK+H F+  + SHP+  
Sbjct: 740 LSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGK 799

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           +IY+ L+ L L+  + GY+PDT+FVL E+EE QK ++LF HS K+A  FG++ T   KPI
Sbjct: 800 DIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPI 859

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++ KN+R+CGDCH  +KY+S+VT R+I+LRD++ FH   DG+CSC DYW
Sbjct: 860 QIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908


>gi|356503240|ref|XP_003520419.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 801

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/718 (36%), Positives = 422/718 (58%), Gaps = 14/718 (1%)

Query: 149 SSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           S +I+SY+      DA  ++  M       + +   +V++AC    +  +G  ++GF++K
Sbjct: 93  SFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVK 152

Query: 209 CGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
            G F  DV V  ALI M+ + GS+ L  A  +FDK+  K+ V W+ MI    + G   +A
Sbjct: 153 NG-FHGDVFVCNALIMMYSEVGSLAL--ARLLFDKIENKDVVSWSTMIRSYDRSGLLDEA 209

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL----ALDVCVGCS 323
           + L  DM +    P    +  +    +EL     GK +H++ +R G      + +C   +
Sbjct: 210 LDLLRDMHVMRVKPSEIGMISITHVLAELADLKLGKAMHAYVMRNGKCGKSGVPLCT--A 267

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMY KC    ++  +R+VFD +   +++SWTA+I  Y+     + E V+LF  M+   
Sbjct: 268 LIDMYVKCE---NLAYARRVFDGLSKASIISWTAMIAAYIHCNNLN-EGVRLFVKMLGEG 323

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + PN  T  S++K CG      + + ++   ++ G  L   +  + I MY + G +  AR
Sbjct: 324 MFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGDVRSAR 383

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
             F+S   K+L+ ++ M+ +YA+N   ++AF++   +   G+  +  T  SLL   +  G
Sbjct: 384 SVFDSFKSKDLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLMICAKAG 443

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           ++  G+ IH+ I K G + +  +  + + MY+ C +++ A ++F E  DR++  W +MI+
Sbjct: 444 SLEMGKWIHSYIDKQGIKGDMILKTSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMIS 503

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           GFA HG    ALE+F +M A G+ PN IT+I  L ACSH+GL+ EG + F  M  E G  
Sbjct: 504 GFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFT 563

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            ++EHY CMVDLLGR+G L EA E I+SMP+  ++ V+ +FL AC++H + +LG+ AA+ 
Sbjct: 564 PKVEHYGCMVDLLGRAGLLDEAHELIKSMPMRPNIAVFGSFLAACKLHKNIKLGEWAAKQ 623

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
            L  +P     ++L+SN+YASA  W  VA IR+ MK+  ++KE G S IE +  +H+F +
Sbjct: 624 FLSLEPHKSGYNVLMSNIYASANRWGDVAYIRRAMKDEGIVKEPGVSSIEVNGLLHEFIM 683

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+  HP   ++Y  +D++  K+++ GY PD + VLH +++E+KV  L  HSEK+A+A+GL
Sbjct: 684 GDREHPDAKKVYEMIDEMREKLEDAGYTPDVSCVLHNIDKEKKVSALNYHSEKLAMAYGL 743

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IST+   PIR+ KNLRVC DCH A K +S + GREI++RD NRFHH K+G CSC DYW
Sbjct: 744 ISTAPGVPIRIVKNLRVCDDCHNATKLLSKIYGREIIVRDRNRFHHFKEGSCSCCDYW 801



 Score =  221 bits (564), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 139/504 (27%), Positives = 250/504 (49%), Gaps = 15/504 (2%)

Query: 72  KGNHPDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
           +G   ++D + +  +LK+C    +F LG+ VH  + ++    +  + N+LI +YS+ G L
Sbjct: 116 RGTDTEVDNFVIPSVLKACCLIPSFLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSL 175

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
             A  +F  + NK D+VSWS+MI SY   G   +A+ +  +M  +   P+E    ++   
Sbjct: 176 ALARLLFDKIENK-DVVSWSTMIRSYDRSGLLDEALDLLRDMHVMRVKPSEIGMISITHV 234

Query: 190 CSNTENVAIGHIIYGFLL---KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
            +   ++ +G  ++ +++   KCG     +C   ALIDM+VK   +L  A +VFD +++ 
Sbjct: 235 LAELADLKLGKAMHAYVMRNGKCGKSGVPLCT--ALIDMYVKCE-NLAYARRVFDGLSKA 291

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + + WT MI          + +RLF+ M+  G  P+  T+  +V  C        GK LH
Sbjct: 292 SIISWTAMIAAYIHCNNLNEGVRLFVKMLGEGMFPNEITMLSLVKECGTAGALELGKLLH 351

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           ++ +R G  L + +  + +DMY KC   G V  +R VFD     ++M W+A+I+ Y Q+ 
Sbjct: 352 AFTLRNGFTLSLVLATAFIDMYGKC---GDVRSARSVFDSFKSKDLMMWSAMISSYAQNN 408

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
             D EA  +F  M    + PN  T  S+L  C       + + ++++  K+G   D  + 
Sbjct: 409 CID-EAFDIFVHMTGCGIRPNERTMVSLLMICAKAGSLEMGKWIHSYIDKQGIKGDMILK 467

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
            S + MYA  G ++ A + F    ++++  +N M+  +A + + E A EL  E+E  GV 
Sbjct: 468 TSFVDMYANCGDIDTAHRLFAEATDRDISMWNAMISGFAMHGHGEAALELFEEMEALGVT 527

Query: 487 TSAYTFASLLSGASSIGAIGKGEQI-HARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
            +  TF   L   S  G + +G+++ H  + + GF      Y  ++ +  R   ++ A +
Sbjct: 528 PNDITFIGALHACSHSGLLQEGKRLFHKMVHEFGFTPKVEHYGCMVDLLGRAGLLDEAHE 587

Query: 546 VFKEMEDR-NVISWTSMITGFAKH 568
           + K M  R N+  + S +     H
Sbjct: 588 LIKSMPMRPNIAVFGSFLAACKLH 611



 Score =  121 bits (304), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 21/341 (6%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P+  T   L+K C  +    LGKL+H+   R+    + V+  + I +Y KCGD
Sbjct: 319 MLGEGMFPNEITMLSLVKECGTAGALELGKLLHAFTLRNGFTLSLVLATAFIDMYGKCGD 378

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +  A  +F S  +K D++ WS+MISSY       +A  +FV M   G  PNE    +++ 
Sbjct: 379 VRSARSVFDSFKSK-DLMMWSAMISSYAQNNCIDEAFDIFVHMTGCGIRPNERTMVSLLM 437

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            C+   ++ +G  I+ ++ K G    D+ +  + +DM+     D+++A+++F + T+++ 
Sbjct: 438 ICAKAGSLEMGKWIHSYIDKQG-IKGDMILKTSFVDMYANCG-DIDTAHRLFAEATDRDI 495

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL-HS 307
             W  MI+     G    A+ LF +M   G  P+  T  G + ACS   L   GK+L H 
Sbjct: 496 SMWNAMISGFAMHGHGEAALELFEEMEALGVTPNDITFIGALHACSHSGLLQEGKRLFHK 555

Query: 308 WAIRTGLALDV-CVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQS 365
                G    V   GC +VD+  +    G +D++ ++   M +  N+  + + +      
Sbjct: 556 MVHEFGFTPKVEHYGC-MVDLLGRA---GLLDEAHELIKSMPMRPNIAVFGSFLA----- 606

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
                 A KL  ++  G+ A   F      K+  N+L SN+
Sbjct: 607 ------ACKLHKNIKLGEWAAKQFLSLEPHKSGYNVLMSNI 641



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 40/152 (26%), Positives = 79/152 (51%), Gaps = 1/152 (0%)

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
           A ES +  N   ++ ++ +Y KN     A ++   +  T      +   S+L     I +
Sbjct: 81  ALES-YSSNAAIHSFLITSYIKNNCPADAAKIYAYMRGTDTEVDNFVIPSVLKACCLIPS 139

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
              G+++H  ++K+GF  +  + NALI MYS   ++  A  +F ++E+++V+SW++MI  
Sbjct: 140 FLLGQEVHGFVVKNGFHGDVFVCNALIMMYSEVGSLALARLLFDKIENKDVVSWSTMIRS 199

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           + + G    AL++   M    +KP+ I  I++
Sbjct: 200 YDRSGLLDEALDLLRDMHVMRVKPSEIGMISI 231


>gi|449455978|ref|XP_004145727.1| PREDICTED: uncharacterized protein LOC101212001 [Cucumis sativus]
          Length = 2598

 Score =  507 bits (1305), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 261/634 (41%), Positives = 383/634 (60%), Gaps = 16/634 (2%)

Query: 237  YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            YK  DK    N   W  +I    + G   +A+R F  +   G +P R +    + +CS L
Sbjct: 1972 YKYVDK---SNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSAL 2028

Query: 297  ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                SG+  H  A   G   D+ V  +L+DMY+KC   G + D+R +FD +   NV+SWT
Sbjct: 2029 CDLVSGRMSHQQAFVFGFETDLFVSSALIDMYSKC---GQLKDARALFDEIPLRNVVSWT 2085

Query: 357  AIITGYVQSGGRDKEAVKLFSDMIQGQ--------VAPNHFTFASVLKACGNLLDSNVAE 408
            ++ITGYVQ+   D  A+ LF D ++ +        V  +     SVL AC  +    + E
Sbjct: 2086 SMITGYVQNEQAD-NALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITE 2144

Query: 409  QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
             V+   VK+G      VGN+L+  YA+ G+   ++K F+ + EK+ +S+N+M+  YA++ 
Sbjct: 2145 GVHGFVVKKGFDGSIGVGNTLMDAYAKCGQPLVSKKVFDWMEEKDDISWNSMIAVYAQSG 2204

Query: 469  NSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
             S +A E+ H  +   GV  +A T +++L   +  GA+  G+ IH ++IK   E N C+ 
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264

Query: 528  NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
             ++I MY +C  VE A + F  M+++NV SWT+M+ G+  HG A  AL+IFYKM+  G+K
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324

Query: 588  PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            PN IT+++VL+ACSHAGL+ EGW  F +M  ++ I   +EHY CMVDL GR+G L EA  
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEHYGCMVDLFGRAGCLNEAYN 2384

Query: 648  FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
             I+ M +  D +VW + LGACR+H + +LG+ AA+ + E DP +   ++LLSNLYA AG 
Sbjct: 2385 LIKRMKMKPDFVVWGSLLGACRIHKNVDLGEIAAQKLFELDPDNCGYYVLLSNLYADAGR 2444

Query: 708  WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
            W  V  +R  MK R L+K  G S +E   +VH F VG+  HP    IY  L++L L++++
Sbjct: 2445 WADVERMRMLMKNRQLVKPPGFSLVELKGRVHVFLVGDKEHPHHEMIYKYLEKLTLELQK 2504

Query: 768  FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
             GY+P+   VLH+++EE+K   L  HSEK+AVAFG+++++    I + KNLRVCGDCHT 
Sbjct: 2505 IGYVPNMTSVLHDVDEEEKEIILRVHSEKLAVAFGVMNSAPGTTINIIKNLRVCGDCHTV 2564

Query: 828  IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IK IS +  R+ V+RDS RFHH KDG CSC DYW
Sbjct: 2565 IKLISKLVHRDFVVRDSKRFHHFKDGVCSCGDYW 2598



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 190/380 (50%), Gaps = 35/380 (9%)

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
           F   +Q+H+  IR+GL+ D  +   L+ +Y   +  G +  +  +F ++ +    +W  I
Sbjct: 40  FKHLRQIHAKIIRSGLSNDQLLTRKLIHLY---STHGRIAYAILLFYQIQNPCTFTWNLI 96

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I     +G   ++A+ L+ +M+   +A + FTF  V+KAC N L  ++ + V+   +K G
Sbjct: 97  IRANTING-LSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYG 155

Query: 419 RALDDCVGNSLISMYARSGR-------------------------------MEDARKAFE 447
            + D  V N+LI  Y + G                                +++AR+ F+
Sbjct: 156 FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFD 215

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            +  KN+VS+  M++ Y +N   E+A EL   ++   +  + YT  SL+   + +G +  
Sbjct: 216 EIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTL 275

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G  IH   IK+  E    +  ALI MYS+C +++ A +VF+ M  +++ +W SMIT    
Sbjct: 276 GRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKSLPTWNSMITSLGV 335

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG    AL +F +M    +KP+ IT+I VL AC H   + EG  +F  M   +GI    E
Sbjct: 336 HGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFTRMTQHYGIAPIPE 395

Query: 628 HYACMVDLLGRSGSLTEALE 647
           HY CM +L  RS +L EA +
Sbjct: 396 HYECMTELYARSNNLDEAFK 415



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/351 (34%), Positives = 183/351 (52%), Gaps = 16/351 (4%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
            G   +A+     + + G  P   ++   +KSC    +   G++ H        E +  + 
Sbjct: 1994 GDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCDLVSGRMSHQQAFVFGFETDLFVS 2053

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-- 174
            ++LI +YSKCG L +A  +F  +   R++VSW+SMI+ YV   +  +A+ +F + LE   
Sbjct: 2054 SALIDMYSKCGQLKDARALFDEIP-LRNVVSWTSMITGYVQNEQADNALLLFKDFLEEET 2112

Query: 175  ------GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
                      +     +V+ ACS      I   ++GF++K G FD  + VG  L+D + K
Sbjct: 2113 EVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKG-FDGSIGVGNTLMDAYAK 2171

Query: 229  GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLS 287
                L S  KVFD M EK+ + W  MI    Q G   +A+ +F  M+   G   +  TLS
Sbjct: 2172 CGQPLVSK-KVFDWMEEKDDISWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLS 2230

Query: 288  GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
             V+ AC+      +GK +H   I+  L  +VCVG S++DMY KC   G V+ ++K FDRM
Sbjct: 2231 AVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVGTSIIDMYCKC---GRVEMAKKTFDRM 2287

Query: 348  LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             + NV SWTA++ GY    GR KEA+ +F  M++  V PN+ TF SVL AC
Sbjct: 2288 KEKNVKSWTAMVAGYGMH-GRAKEALDIFYKMVRAGVKPNYITFVSVLAAC 2337



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 223/442 (50%), Gaps = 25/442 (5%)

Query: 136  FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
            F    +K ++ SW+S+I+     G  V+A+  F  + +LG  P    F   I++CS   +
Sbjct: 1971 FYKYVDKSNVHSWNSVIADLARGGDSVEALRAFSSLRKLGLIPTRSSFPCTIKSCSALCD 2030

Query: 196  VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
            +  G + +      G F++D+ V  ALIDM+ K    L+ A  +FD++  +N V WT MI
Sbjct: 2031 LVSGRMSHQQAFVFG-FETDLFVSSALIDMYSKCG-QLKDARALFDEIPLRNVVSWTSMI 2088

Query: 256  TRCTQLGCPRDAIRLFLDMILS-------GFLP-DRFTLSGVVSACSELELFTSGKQLHS 307
            T   Q     +A+ LF D +           +P D   +  V+SACS +      + +H 
Sbjct: 2089 TGYVQNEQADNALLLFKDFLEEETEVEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHG 2148

Query: 308  WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            + ++ G    + VG +L+D YAKC   G    S+KVFD M + + +SW ++I  Y QS G
Sbjct: 2149 FVVKKGFDGSIGVGNTLMDAYAKC---GQPLVSKKVFDWMEEKDDISWNSMIAVYAQS-G 2204

Query: 368  RDKEAVKLFSDMIQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
               EA+++F  M++   V  N  T ++VL AC +       + ++   +K     + CVG
Sbjct: 2205 LSGEALEVFHGMVRHVGVRYNAVTLSAVLLACAHAGALRAGKCIHDQVIKMDLEYNVCVG 2264

Query: 427  NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
             S+I MY + GR+E A+K F+ + EKN+ S+  MV  Y  +  +++A ++ +++   GV 
Sbjct: 2265 TSIIDMYCKCGRVEMAKKTFDRMKEKNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVK 2324

Query: 487  TSAYTFASLLSGASSIGAIGKG-----EQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             +  TF S+L+  S  G + +G        H   I+ G E     Y  ++ ++ R   + 
Sbjct: 2325 PNYITFVSVLAACSHAGLVEEGWHWFNAMKHKYDIEPGIEH----YGCMVDLFGRAGCLN 2380

Query: 542  AAFQVFKEMEDR-NVISWTSMI 562
             A+ + K M+ + + + W S++
Sbjct: 2381 EAYNLIKRMKMKPDFVVWGSLL 2402



 Score =  166 bits (419), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 199/394 (50%), Gaps = 40/394 (10%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            LL++C   +NF   + +H+ + RS L  + ++   LI LYS  G +  A  +F  + N 
Sbjct: 32  FLLQNC---KNFKHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNP 88

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
               +W+ +I +    G    A+ ++  M+  G   +++ F  VI+AC+N  ++ +G ++
Sbjct: 89  CTF-TWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVV 147

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK---------------------------GSV---D 232
           +G L+K G F  DV V   LID + K                           G +   D
Sbjct: 148 HGSLIKYG-FSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGD 206

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A ++FD++  KN V WT MI    +   P +A+ LF  M      P+ +T+  ++ A
Sbjct: 207 LQEARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKA 266

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+E+ + T G+ +H +AI+  + + V +G +L+DMY+KC   GS+ D+ +VF+ M   ++
Sbjct: 267 CTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKC---GSIKDAIEVFETMPRKSL 323

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +W ++IT  +   G  +EA+ LFS+M +  V P+  TF  VL AC ++ +       +T
Sbjct: 324 PTWNSMITS-LGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCAYFT 382

Query: 413 HAVKR-GRALDDCVGNSLISMYARSGRMEDARKA 445
              +  G A        +  +YARS  +++A K+
Sbjct: 383 RMTQHYGIAPIPEHYECMTELYARSNNLDEAFKS 416



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/341 (27%), Positives = 167/341 (48%), Gaps = 30/341 (8%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +F ++    T  W L+I   T  G    A+ L+ +M+  G   D+FT   V+ AC+    
Sbjct: 81  LFYQIQNPCTFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLS 140

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC----------------------TVD-- 334
              GK +H   I+ G + DV V  +L+D Y KC                      TV   
Sbjct: 141 IDLGKVVHGSLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISG 200

Query: 335 ----GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
               G + ++R++FD +   NV+SWTA+I GY+++  + +EA++LF  M    + PN +T
Sbjct: 201 LISCGDLQEARRIFDEIPSKNVVSWTAMINGYIRNQ-QPEEALELFKRMQAENIFPNEYT 259

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
             S++KAC  +    +   ++ +A+K    +   +G +LI MY++ G ++DA + FE++ 
Sbjct: 260 MVSLIKACTEMGILTLGRGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMP 319

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            K+L ++N+M+ +   +   ++A  L  E+E   V   A TF  +L     I  + +G  
Sbjct: 320 RKSLPTWNSMITSLGVHGLGQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEGCA 379

Query: 511 IHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
              R+ +  G       Y  +  +Y+R  N++ AF+  KE+
Sbjct: 380 YFTRMTQHYGIAPIPEHYECMTELYARSNNLDEAFKSTKEV 420



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 153/300 (51%), Gaps = 21/300 (7%)

Query: 70   TQKGNHPDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
             + GN+  LD+  ++  L +C R     + + VH  + +   + +  + N+L+  Y+KCG
Sbjct: 2114 VEDGNNVPLDSVVMVSVLSACSRVSGKGITEGVHGFVVKKGFDGSIGVGNTLMDAYAKCG 2173

Query: 128  DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAV 186
                + K+F  M  K DI SW+SMI+ Y   G   +A+ +F  M+  +G   N    SAV
Sbjct: 2174 QPLVSKKVFDWMEEKDDI-SWNSMIAVYAQSGLSGEALEVFHGMVRHVGVRYNAVTLSAV 2232

Query: 187  IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
            + AC++   +  G  I+  ++K    + +VCVG ++IDM+ K G V++  A K FD+M E
Sbjct: 2233 LLACAHAGALRAGKCIHDQVIKMD-LEYNVCVGTSIIDMYCKCGRVEM--AKKTFDRMKE 2289

Query: 246  KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG--- 302
            KN   WT M+      G  ++A+ +F  M+ +G  P+  T   V++ACS   L   G   
Sbjct: 2290 KNVKSWTAMVAGYGMHGRAKEALDIFYKMVRAGVKPNYITFVSVLAACSHAGLVEEGWHW 2349

Query: 303  --KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAII 359
                 H + I  G+      GC +VD++ +    G ++++  +  RM +  + + W +++
Sbjct: 2350 FNAMKHKYDIEPGIEH---YGC-MVDLFGRA---GCLNEAYNLIKRMKMKPDFVVWGSLL 2402



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 80/329 (24%), Positives = 152/329 (46%), Gaps = 45/329 (13%)

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           +L+ C N        Q++   ++ G + D  +   LI +Y+  GR+  A   F  +    
Sbjct: 33  LLQNCKNF---KHLRQIHAKIIRSGLSNDQLLTRKLIHLYSTHGRIAYAILLFYQIQNPC 89

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
             ++N ++ A   N  SE+A  L   +   G+    +TF  ++   ++  +I  G+ +H 
Sbjct: 90  TFTWNLIIRANTINGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHG 149

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT-------------- 559
            +IK GF  +  + N LI  Y +C +   A +VF++M  RNV+SWT              
Sbjct: 150 SLIKYGFSGDVFVQNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQE 209

Query: 560 -----------------SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
                            +MI G+ ++     ALE+F +M A+ I PN  T ++++ AC+ 
Sbjct: 210 ARRIFDEIPSKNVVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTE 269

Query: 603 AGLISEGWKHFRSMYD---EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
            G+++ G    R ++D   ++ I   +     ++D+  + GS+ +A+E   +MP  + + 
Sbjct: 270 MGILTLG----RGIHDYAIKNCIEIGVYLGTALIDMYSKCGSIKDAIEVFETMPRKS-LP 324

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQD 688
            W + + +  VHG   LG+ A  +  E +
Sbjct: 325 TWNSMITSLGVHG---LGQEALNLFSEME 350



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 131/279 (46%), Gaps = 36/279 (12%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+     M  +G   D  T+  ++K+C    +  LGK+VH  L +     +  +
Sbjct: 103 NGLSEQALMLYKNMVCQGIAADKFTFPFVIKACTNFLSIDLGKVVHGSLIKYGFSGDVFV 162

Query: 116 LNSLISLYSK-------------------------------CGDLNEANKIFKSMGNKRD 144
            N+LI  Y K                               CGDL EA +IF  + +K +
Sbjct: 163 QNNLIDFYFKCGHTRFALKVFEKMRVRNVVSWTTVISGLISCGDLQEARRIFDEIPSK-N 221

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           +VSW++MI+ Y+   +  +A+ +F  M      PNEY   ++I+AC+    + +G  I+ 
Sbjct: 222 VVSWTAMINGYIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHD 281

Query: 205 FLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           + +K    +  V +G ALIDM+ K GS+  + A +VF+ M  K+   W  MIT     G 
Sbjct: 282 YAIK-NCIEIGVYLGTALIDMYSKCGSI--KDAIEVFETMPRKSLPTWNSMITSLGVHGL 338

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
            ++A+ LF +M      PD  T  GV+ AC  ++    G
Sbjct: 339 GQEALNLFSEMERVNVKPDAITFIGVLCACVHIKNVKEG 377



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 10/160 (6%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ + + ++A+     M  +   P+  T   L+K+C       LG+ +H    ++ +E  
Sbjct: 232 YIRNQQPEEALELFKRMQAENIFPNEYTMVSLIKACTEMGILTLGRGIHDYAIKNCIEIG 291

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +LI +YSKCG + +A ++F++M  ++ + +W+SMI+S    G   +A+++F EM 
Sbjct: 292 VYLGTALIDMYSKCGSIKDAIEVFETMP-RKSLPTWNSMITSLGVHGLGQEALNLFSEME 350

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
            +   P+   F  V+ AC + +NV  G         C YF
Sbjct: 351 RVNVKPDAITFIGVLCACVHIKNVKEG---------CAYF 381


>gi|449464496|ref|XP_004149965.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
 gi|449497665|ref|XP_004160467.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Cucumis sativus]
          Length = 938

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 275/816 (33%), Positives = 468/816 (57%), Gaps = 13/816 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ + ++G  ++ I T   M  +G   + +  +L++ SC    +  LG  +     +  L
Sbjct: 132 MVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFGL 191

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E      NSLI ++  CGD+NEA  IF  M N+RD +SW+S+IS+        ++   F 
Sbjct: 192 ETKVSAANSLIFMFGGCGDINEACSIFNEM-NERDTISWNSIISANAQNTLHEESFRYFH 250

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M  +    N    S ++  C + + +  G  ++G  +K G  +S++C+   L+ ++   
Sbjct: 251 WMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYG-LESNICLCNTLLSVYSDA 309

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
               + A  +F +M E++ + W  M+    Q G    A+++F +M+      +  T +  
Sbjct: 310 GRS-KDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFTSA 368

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC + E FT+GK LH + +  GL  ++ +G +L+  Y KC     + +++KVF RM  
Sbjct: 369 LAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCH---KMAEAKKVFQRMPK 425

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKAC---GNLLDSN 405
            + ++W A+I G+  +   + EAV  F  M +G  +  ++ T  ++L +C    +L+   
Sbjct: 426 LDKVTWNALIGGFANNAELN-EAVAAFKLMREGSTSGVDYITIVNILGSCLTHEDLIKYG 484

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           +   ++ H V  G  LD  V +SLI+MYA+ G +  +   F+ L  K    +N ++ A A
Sbjct: 485 IP--IHAHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANA 542

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +    E+A +L+  +   G+    + F++ LS A+ +  + +G+Q+H   IK GFE +H 
Sbjct: 543 RYGFGEEALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIKLGFELDHF 602

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           I NA + MY +C  ++ A ++  +  DR+ +SW ++I+  A+HG   +A E F+ ML  G
Sbjct: 603 IINAAMDMYGKCGELDDALRILPQPTDRSRLSWNTLISISARHGQFHKAKETFHDMLKLG 662

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +KPN ++++ +LSACSH GL+ EG  ++ SM   +GI   +EH  CM+DLLGRSG L EA
Sbjct: 663 VKPNHVSFVCLLSACSHGGLVDEGLAYYASMTSVYGIQPGIEHCVCMIDLLGRSGRLVEA 722

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
             FI  MP+  + LVWR+ L +CR++ + +LG+ AA+ +LE DP D +A++L SN++A+ 
Sbjct: 723 EAFITEMPIPPNDLVWRSLLASCRIYRNLDLGRKAAKHLLELDPSDDSAYVLYSNVFATI 782

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G WE V ++R +M    + K+   SW++    +  F +G+ +HP+  +I  +L  L   +
Sbjct: 783 GRWEDVEDVRGQMGAHKIQKKPAHSWVKWKGNISIFGMGDQTHPQMEQINGKLLGLMKIV 842

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
            E GY+PDT++ L + +EEQK   ++ HSE+IA+AFGLI+  +   +R+FKNLRVCGDCH
Sbjct: 843 GEAGYVPDTSYSLQDTDEEQKEHNMWSHSERIALAFGLINIPEGSTVRIFKNLRVCGDCH 902

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +  K++S V GR+IVLRD  RFHH  +G CSC+DYW
Sbjct: 903 SFFKFVSGVLGRKIVLRDPYRFHHFTNGNCSCSDYW 938



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 157/582 (26%), Positives = 296/582 (50%), Gaps = 19/582 (3%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G   H    +  L  +  +  S +  Y+  G ++ A K+F  M + R++VSW+S++ SY 
Sbjct: 78  GFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKMFNEMPD-RNVVSWTSLMVSYS 136

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G + + I+ +  M   G C NE   + VI +C    ++ +GH + G  LK G  ++ V
Sbjct: 137 DNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHALKFG-LETKV 195

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
               +LI MF  G  D+  A  +F++M E++T+ W  +I+   Q     ++ R F  M L
Sbjct: 196 SAANSLIFMF-GGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESFRYFHWMRL 254

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
                +  TLS ++S C  ++    GK +H  A++ GL  ++C+  +L+ +Y+     G 
Sbjct: 255 VHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVYSDA---GR 311

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
             D+  +F RM + +++SW +++  YVQ  GR   A+K+F++M+  +   N+ TF S L 
Sbjct: 312 SKDAELIFRRMPERDLISWNSMLACYVQD-GRCLCALKVFAEMLWMKKEINYVTFTSALA 370

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC +       + ++   V  G   +  +GN+LI+ Y +  +M +A+K F+ + + + V+
Sbjct: 371 ACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMPKLDKVT 430

Query: 457 YNTMVDAYAKN--LNSE-KAFELLHEIEDTGVGTSAYTFASLL-SGASSIGAIGKGEQIH 512
           +N ++  +A N  LN    AF+L+ E   +GV     T  ++L S  +    I  G  IH
Sbjct: 431 WNALIGGFANNAELNEAVAAFKLMREGSTSGV--DYITIVNILGSCLTHEDLIKYGIPIH 488

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           A  + +GF+ +  + ++LI+MY++C ++ ++  +F ++  +    W ++I   A++GF  
Sbjct: 489 AHTVVTGFDLDQHVQSSLITMYAKCGDLHSSSYIFDQLVFKTSSVWNAIIAANARYGFGE 548

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA-- 630
            AL++  +M + GI+ +   +   LS  +   ++ EG +   S      +   ++H+   
Sbjct: 549 EALKLVVRMRSAGIEFDQFNFSTALSVAADLAMLEEGQQLHGSTIK---LGFELDHFIIN 605

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
             +D+ G+ G L +AL  I   P     L W T +     HG
Sbjct: 606 AAMDMYGKCGELDDALR-ILPQPTDRSRLSWNTLISISARHG 646



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 135/471 (28%), Positives = 235/471 (49%), Gaps = 10/471 (2%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD+M+E+N   W  M++   ++G   +A+  F D+   G  P  F ++ +V+AC++
Sbjct: 11  AQLVFDRMSERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGFMIASLVTACNK 70

Query: 296 LELFT-SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
             +    G Q H +AI+ GL  DV VG S V  YA     G V +++K+F+ M D NV+S
Sbjct: 71  SSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASY---GIVSNAQKMFNEMPDRNVVS 127

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WT+++  Y  +G + KE +  +  M    +  N    A V+ +CG L+D  +  Q+  HA
Sbjct: 128 WTSLMVSYSDNGSK-KEVINTYKRMRHEGICCNENNIALVISSCGFLMDIILGHQLLGHA 186

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K G        NSLI M+   G + +A   F  + E++ +S+N+++ A A+N   E++F
Sbjct: 187 LKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISANAQNTLHEESF 246

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
              H +       +  T + LLS   S+  +  G+ +H   +K G ESN C+ N L+S+Y
Sbjct: 247 RYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLESNICLCNTLLSVY 306

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S     + A  +F+ M +R++ISW SM+  + + G    AL++F +ML    + N +T+ 
Sbjct: 307 SDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEMLWMKKEINYVTFT 366

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           + L+AC      + G K         G+   +     ++   G+   + EA +  + MP 
Sbjct: 367 SALAACLDPEFFTNG-KILHGFVVVLGLQDELIIGNTLITFYGKCHKMAEAKKVFQRMP- 424

Query: 655 SADVLVWRTFLGACRVHGDTELGKH-AAEMILEQDPQDPAAHILLSNLYAS 704
             D + W   +G      + EL +  AA  ++ +       +I + N+  S
Sbjct: 425 KLDKVTWNALIGG--FANNAELNEAVAAFKLMREGSTSGVDYITIVNILGS 473



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 253/493 (51%), Gaps = 14/493 (2%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YSK G +N A  +F  M ++R+  SW+ M+S YV  G  V+A+  F ++  +G  P+ +
Sbjct: 1   MYSKFGRINYAQLVFDRM-SERNEASWNHMMSGYVRVGSYVEAVLFFRDICGIGIKPSGF 59

Query: 182 CFSAVIRACSNTENVAI-GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             ++++ AC+ +  +A  G   +GF +KCG    DV VG + +  +    + + +A K+F
Sbjct: 60  MIASLVTACNKSSIMAKEGFQFHGFAIKCGLI-YDVFVGTSFVHFYASYGI-VSNAQKMF 117

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           ++M ++N V WT ++   +  G  ++ I  +  M   G   +   ++ V+S+C  L    
Sbjct: 118 NEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDII 177

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G QL   A++ GL   V    SL+ M+  C   G ++++  +F+ M + + +SW +II+
Sbjct: 178 LGHQLLGHALKFGLETKVSAANSLIFMFGGC---GDINEACSIFNEMNERDTISWNSIIS 234

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
              Q+    +E+ + F  M       N+ T + +L  CG++      + V+  AVK G  
Sbjct: 235 ANAQN-TLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWGKGVHGLAVKYGLE 293

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            + C+ N+L+S+Y+ +GR +DA   F  + E++L+S+N+M+  Y ++     A ++  E+
Sbjct: 294 SNICLCNTLLSVYSDAGRSKDAELIFRRMPERDLISWNSMLACYVQDGRCLCALKVFAEM 353

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
                  +  TF S L+          G+ +H  ++  G +    I N LI+ Y +C  +
Sbjct: 354 LWMKKEINYVTFTSALAACLDPEFFTNGKILHGFVVVLGLQDELIIGNTLITFYGKCHKM 413

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL--- 597
             A +VF+ M   + ++W ++I GFA +     A+  F K++ +G   +G+ YI ++   
Sbjct: 414 AEAKKVFQRMPKLDKVTWNALIGGFANNAELNEAVAAF-KLMREG-STSGVDYITIVNIL 471

Query: 598 -SACSHAGLISEG 609
            S  +H  LI  G
Sbjct: 472 GSCLTHEDLIKYG 484



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 92/346 (26%), Positives = 167/346 (48%), Gaps = 8/346 (2%)

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MY+K    G ++ ++ VFDRM + N  SW  +++GYV+ G    EAV  F D+    + P
Sbjct: 1   MYSKF---GRINYAQLVFDRMSERNEASWNHMMSGYVRVGSY-VEAVLFFRDICGIGIKP 56

Query: 387 NHFTFASVLKACG-NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           + F  AS++ AC  + + +    Q +  A+K G   D  VG S +  YA  G + +A+K 
Sbjct: 57  SGFMIASLVTACNKSSIMAKEGFQFHGFAIKCGLIYDVFVGTSFVHFYASYGIVSNAQKM 116

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  + ++N+VS+ +++ +Y+ N + ++       +   G+  +    A ++S    +  I
Sbjct: 117 FNEMPDRNVVSWTSLMVSYSDNGSKKEVINTYKRMRHEGICCNENNIALVISSCGFLMDI 176

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             G Q+    +K G E+     N+LI M+  C ++  A  +F EM +R+ ISW S+I+  
Sbjct: 177 ILGHQLLGHALKFGLETKVSAANSLIFMFGGCGDINEACSIFNEMNERDTISWNSIISAN 236

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           A++     +   F+ M     + N  T   +LS C     +  G K    +  ++G+   
Sbjct: 237 AQNTLHEESFRYFHWMRLVHEEINYTTLSILLSICGSVDYLKWG-KGVHGLAVKYGLESN 295

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           +     ++ +   +G   +A    R MP   D++ W + L AC V 
Sbjct: 296 ICLCNTLLSVYSDAGRSKDAELIFRRMP-ERDLISWNSML-ACYVQ 339


>gi|108862806|gb|ABA99524.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1176

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 269/768 (35%), Positives = 449/768 (58%), Gaps = 7/768 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  ++A+     M + G  P     S +L SC ++  F  G+L+H+   +      
Sbjct: 118 YAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSE 177

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N++I+LY +CG    A ++F  M + RD V+++++IS +   G    A+ +F EM 
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQ 236

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+    S+++ AC++  ++  G  ++ +L K G   SD  +  +L+D++VK   D
Sbjct: 237 FSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG-ISSDYIMEGSLLDLYVKCG-D 294

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E+A  +F+     N V W LM+    Q+     +  LF  M  +G  P++FT   ++  
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       G+Q+HS +++TG   D+ V   L+DMY+K    G ++ +R+V + + + +V
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY---GWLEKARRVLEMLKEKDV 411

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT++I GYVQ     K+A+  F +M +  + P++   AS +  C  +       Q++ 
Sbjct: 412 VSWTSMIAGYVQHEC-CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                G + D  + N+L+++YAR GR+ +A  +FE +  K+ +++N +V  +A++   E+
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++   ++ +GV  + +TF S LS ++++  I +G+QIHAR+IK+G      + NALIS
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y +C + E A   F EM +RN +SW ++IT  ++HG    AL++F +M  +GIKPN +T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +I VL+ACSH GL+ EG  +F+SM DE+GI  R +HYAC++D+ GR+G L  A +FI  M
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P++AD +VWRT L AC+VH + E+G+ AA+ +LE +P D A+++LLSN YA    W    
Sbjct: 711 PIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRD 770

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +RK M++R + KE G SWIE  N VH F VG+  HP   +IY  L  +  ++ + GY  
Sbjct: 771 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 830

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +   + H+ E+E +      HSEK+AV FGL+S     P+RV KNLRV
Sbjct: 831 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 191/609 (31%), Positives = 324/609 (53%), Gaps = 15/609 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCI-RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           D   Q G    LD ++  L++C    R + +   +H+      L    ++ N LI LYSK
Sbjct: 31  DKARQHGGLGPLD-FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSK 89

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
            G +  A ++F+ + + RD VSW +M+S Y   G   +A+ ++ +M   G  P  Y  S+
Sbjct: 90  NGLVLPARRVFEEL-SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           V+ +C+  E  A G +I+    K G F S++ VG A+I ++++ GS  L  A +VF  M 
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHG-FCSEIFVGNAVITLYLRCGSFRL--AERVFCDMP 205

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++TV +  +I+   Q G    A+ +F +M  SG  PD  T+S +++AC+ L     G Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LHS+  + G++ D  +  SL+D+Y KC   G V+ +  +F+     NV+ W  ++  + Q
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKC---GDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
                K + +LF  M    + PN FT+  +L+ C    + ++ EQ+++ +VK G   D  
Sbjct: 323 INDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V   LI MY++ G +E AR+  E L EK++VS+ +M+  Y ++   + A     E++  G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +       AS +SG + I A+ +G QIHARI  SG+  +  I+NAL+++Y+RC  +  AF
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
             F+E+E ++ I+W  +++GFA+ G    AL++F +M   G+K N  T+++ LSA ++  
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 605 LISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
            I +G + H R +   H      E    ++ L G+ GS  +A      M    +V  W T
Sbjct: 562 EIKQGKQIHARVIKTGHSF--ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV-SWNT 618

Query: 664 FLGACRVHG 672
            + +C  HG
Sbjct: 619 IITSCSQHG 627



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 154/298 (51%), Gaps = 3/298 (1%)

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           + + LF+D  +         FA  L+AC GN     V  +++  AV RG      VGN L
Sbjct: 24  KVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLL 83

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I +Y+++G +  AR+ FE L  ++ VS+  M+  YA+N   E+A  L  ++   GV  + 
Sbjct: 84  IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTP 143

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           Y  +S+LS  +      +G  IHA+  K GF S   + NA+I++Y RC +   A +VF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCD 203

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  R+ +++ ++I+G A+ G    ALEIF +M   G+ P+ +T  ++L+AC+  G + +G
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
                S   + GI         ++DL  + G +  AL    S   + +V++W   L A
Sbjct: 264 -TQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT-NVVLWNLMLVA 319


>gi|125588087|gb|EAZ28751.1| hypothetical protein OsJ_12773 [Oryza sativa Japonica Group]
          Length = 698

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/700 (38%), Positives = 410/700 (58%), Gaps = 65/700 (9%)

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           MF K S  L  A  VF +M E++ V WT+M+    + G   +AI+  LDM   GF P +F
Sbjct: 1   MFAK-SGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 59

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC------------- 331
           TL+ V+S+C+  +    G+++HS+ ++ GL   V V  S+++MY KC             
Sbjct: 60  TLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDSETATTVFERM 119

Query: 332 ---------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
                          T  G +D +  +F+ M D +++SW A+I GY Q+G  D +A+KLF
Sbjct: 120 PVRSVSSWNAMVSLNTHLGRMDLAESLFESMPDRSIVSWNAMIAGYNQNG-LDAKALKLF 178

Query: 377 SDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           S M+ +  +AP+ FT  SVL AC NL +  + +QV+ + ++   A +  V N+LIS YA+
Sbjct: 179 SRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTYAK 238

Query: 436 SGRMEDARK-------------AFESLFE--------------------KNLVSYNTMVD 462
           SG +E+AR+             +F +L E                    +++V++  M+ 
Sbjct: 239 SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWTAMIV 298

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            Y +N  +++A +L   +   G   ++YT A++LS  +S+  +  G+QIH R I+S  E 
Sbjct: 299 GYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRSLLEQ 358

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           +  + NA+I+MY+R  +   A ++F ++   +  I+WTSMI   A+HG    A+ +F +M
Sbjct: 359 SSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEM 418

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
           L  G++P+ ITY+ VLSACSHAG ++EG +++  + +EH I   M HYACMVDLL R+G 
Sbjct: 419 LRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLARAGL 478

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
            +EA EFIR MP+  D + W + L ACRVH + EL + AAE +L  DP +  A+  ++N+
Sbjct: 479 FSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSAIANV 538

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           Y++ G W   A I K  KE+ + KE G SW    +K+H F   +  HP+   +YA   ++
Sbjct: 539 YSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAMAARM 598

Query: 762 ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVC 821
             +IK  G++PD   VLH++++E K + L +HSEK+A+AFGLIST +   +RV KNLRVC
Sbjct: 599 WEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKNLRVC 658

Query: 822 GDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            DCH AIK IS VT REI++RD+ RFHH +DG CSC DYW
Sbjct: 659 NDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 698



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 157/564 (27%), Positives = 271/564 (48%), Gaps = 85/564 (15%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +++K G L +A  +F  M  +RD VSW+ M+      G+  +AI   ++M   GF P ++
Sbjct: 1   MFAKSGRLADARGVFAEM-PERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFTPTQF 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK------------- 228
             + V+ +C+ T+  A+G  ++ F++K G   S V V  ++++M+ K             
Sbjct: 60  TLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCGDSETATTVFER 118

Query: 229 -------------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
                              G +DL  A  +F+ M +++ V W  MI    Q G    A++
Sbjct: 119 MPVRSVSSWNAMVSLNTHLGRMDL--AESLFESMPDRSIVSWNAMIAGYNQNGLDAKALK 176

Query: 270 LFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
           LF  M+  S   PD FT++ V+SAC+ L     GKQ+H++ +RT +A +  V  +L+  Y
Sbjct: 177 LFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALISTY 236

Query: 329 AKCTVDGSVDDSRKVFDRML--DHNVMSWTAIITGYVQSG-------------------- 366
           AK    GSV+++R++ D+ +  D NV+S+TA++ GYV+ G                    
Sbjct: 237 AK---SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAW 293

Query: 367 ----------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
                     GR+ EA+ LF  MI     PN +T A+VL  C +L   +  +Q++  A++
Sbjct: 294 TAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIR 353

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFE 475
                   V N++I+MYARSG    AR+ F+ + + K  +++ +M+ A A++   E+A  
Sbjct: 354 SLLEQSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVG 413

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS---GFESNHCIYNALIS 532
           L  E+   GV     T+  +LS  S  G + +G++ + +I        E +H  Y  ++ 
Sbjct: 414 LFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSH--YACMVD 471

Query: 533 MYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN-- 589
           + +R      A +  + M  + + I+W S+++    H  A  A     K+L+  I PN  
Sbjct: 472 LLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLS--IDPNNS 529

Query: 590 -GITYIA-VLSACSHAGLISEGWK 611
              + IA V SAC      +  WK
Sbjct: 530 GAYSAIANVYSACGRWSDAARIWK 553



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 161/576 (27%), Positives = 257/576 (44%), Gaps = 116/576 (20%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE-----P 111
           GR  +AI TL  MT  G  P   T + +L SC  ++   +G+ VHS + +  L       
Sbjct: 37  GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 96

Query: 112 NSVI--------------------------LNSLISLYSKCGDLNEANKIFKSMGNKRDI 145
           NSV+                           N+++SL +  G ++ A  +F+SM + R I
Sbjct: 97  NSVLNMYGKCGDSETATTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPD-RSI 155

Query: 146 VSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           VSW++MI+ Y   G    A+ +F  ML E    P+E+  ++V+ AC+N  NV IG  ++ 
Sbjct: 156 VSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHA 215

Query: 205 FLLKCGY-FDSDVCVGCALIDMFVK-GSV------------------------------- 231
           ++L+    ++S V    ALI  + K GSV                               
Sbjct: 216 YILRTEMAYNSQVT--NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIG 273

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+ESA ++F  M  ++ V WT MI    Q G   +AI LF  MI  G  P+ +TL+ V+S
Sbjct: 274 DMESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLS 333

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDH 350
            C+ L     GKQ+H  AIR+ L     V  +++ MYA+    GS   +R++FD++    
Sbjct: 334 VCASLACLDYGKQIHCRAIRSLLEQSSSVSNAIITMYAR---SGSFPWARRMFDQVCWRK 390

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
             ++WT++I    Q  G+ +EAV LF +M++  V P+  T+  VL AC            
Sbjct: 391 ETITWTSMIVALAQH-GQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC------------ 437

Query: 411 YTHA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            +HA  V  G+   D + N                   E      +  Y  MVD  A+  
Sbjct: 438 -SHAGFVNEGKRYYDQIKN-------------------EHQIAPEMSHYACMVDLLARAG 477

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              +A E +  +    V   A  + SLLS A  +    +  ++ A  + S   +N   Y+
Sbjct: 478 LFSEAQEFIRRMP---VEPDAIAWGSLLS-ACRVHKNAELAELAAEKLLSIDPNNSGAYS 533

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNV-----ISWT 559
           A+ ++YS C     A +++K  +++ V      SWT
Sbjct: 534 AIANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 569



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 51/411 (12%)

Query: 36  FIAQPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRN 93
           F + P  S    N +I   N +G   KA+     M  + +  PD  T + +L +C    N
Sbjct: 147 FESMPDRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGN 206

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG-------------------------- 127
             +GK VH+ + R+++  NS + N+LIS Y+K G                          
Sbjct: 207 VRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL 266

Query: 128 -------DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
                  D+  A ++F  M N RD+V+W++MI  Y   G+  +AI +F  M+  G  PN 
Sbjct: 267 EGYVKIGDMESAREMFGVM-NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNS 325

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           Y  +AV+  C++   +  G  I+   ++    +    V  A+I M+ + S     A ++F
Sbjct: 326 YTLAAVLSVCASLACLDYGKQIHCRAIR-SLLEQSSSVSNAIITMYAR-SGSFPWARRMF 383

Query: 241 DKMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           D++   K T+ WT MI    Q G   +A+ LF +M+ +G  PDR T  GV+SACS     
Sbjct: 384 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 443

Query: 300 TSGKQLHSWAIRT--GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWT 356
             GK+ +   I+    +A ++     +VD+ A+    G   ++++   RM ++ + ++W 
Sbjct: 444 NEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARA---GLFSEAQEFIRRMPVEPDAIAWG 499

Query: 357 AIITG-YVQSGGRDKE--AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           ++++   V       E  A KL S  I    +  +   A+V  ACG   D+
Sbjct: 500 SLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIANVYSACGRWSDA 548


>gi|115488988|ref|NP_001066981.1| Os12g0552300 [Oryza sativa Japonica Group]
 gi|113649488|dbj|BAF30000.1| Os12g0552300 [Oryza sativa Japonica Group]
          Length = 1175

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 269/768 (35%), Positives = 449/768 (58%), Gaps = 7/768 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  ++A+     M + G  P     S +L SC ++  F  G+L+H+   +      
Sbjct: 118 YAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSE 177

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N++I+LY +CG    A ++F  M + RD V+++++IS +   G    A+ +F EM 
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQ 236

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+    S+++ AC++  ++  G  ++ +L K G   SD  +  +L+D++VK   D
Sbjct: 237 FSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG-ISSDYIMEGSLLDLYVKCG-D 294

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E+A  +F+     N V W LM+    Q+     +  LF  M  +G  P++FT   ++  
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       G+Q+HS +++TG   D+ V   L+DMY+K    G ++ +R+V + + + +V
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY---GWLEKARRVLEMLKEKDV 411

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT++I GYVQ     K+A+  F +M +  + P++   AS +  C  +       Q++ 
Sbjct: 412 VSWTSMIAGYVQHEC-CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                G + D  + N+L+++YAR GR+ +A  +FE +  K+ +++N +V  +A++   E+
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++   ++ +GV  + +TF S LS ++++  I +G+QIHAR+IK+G      + NALIS
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y +C + E A   F EM +RN +SW ++IT  ++HG    AL++F +M  +GIKPN +T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +I VL+ACSH GL+ EG  +F+SM DE+GI  R +HYAC++D+ GR+G L  A +FI  M
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P++AD +VWRT L AC+VH + E+G+ AA+ +LE +P D A+++LLSN YA    W    
Sbjct: 711 PIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRD 770

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +RK M++R + KE G SWIE  N VH F VG+  HP   +IY  L  +  ++ + GY  
Sbjct: 771 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 830

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +   + H+ E+E +      HSEK+AV FGL+S     P+RV KNLRV
Sbjct: 831 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  307 bits (786), Expect = 2e-80,   Method: Compositional matrix adjust.
 Identities = 191/609 (31%), Positives = 324/609 (53%), Gaps = 15/609 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCI-RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           D   Q G    LD ++  L++C    R + +   +H+      L    ++ N LI LYSK
Sbjct: 31  DKARQHGGLGPLD-FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSK 89

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
            G +  A ++F+ + + RD VSW +M+S Y   G   +A+ ++ +M   G  P  Y  S+
Sbjct: 90  NGLVLPARRVFEEL-SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           V+ +C+  E  A G +I+    K G F S++ VG A+I ++++ GS  L  A +VF  M 
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHG-FCSEIFVGNAVITLYLRCGSFRL--AERVFCDMP 205

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++TV +  +I+   Q G    A+ +F +M  SG  PD  T+S +++AC+ L     G Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LHS+  + G++ D  +  SL+D+Y KC   G V+ +  +F+     NV+ W  ++  + Q
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKC---GDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
                K + +LF  M    + PN FT+  +L+ C    + ++ EQ+++ +VK G   D  
Sbjct: 323 INDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V   LI MY++ G +E AR+  E L EK++VS+ +M+  Y ++   + A     E++  G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +       AS +SG + I A+ +G QIHARI  SG+  +  I+NAL+++Y+RC  +  AF
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
             F+E+E ++ I+W  +++GFA+ G    AL++F +M   G+K N  T+++ LSA ++  
Sbjct: 502 SSFEEIEHKDEITWNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 605 LISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
            I +G + H R +   H      E    ++ L G+ GS  +A      M    +V  W T
Sbjct: 562 EIKQGKQIHARVIKTGHSF--ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV-SWNT 618

Query: 664 FLGACRVHG 672
            + +C  HG
Sbjct: 619 IITSCSQHG 627



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 154/298 (51%), Gaps = 3/298 (1%)

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           + + LF+D  +         FA  L+AC GN     V  +++  AV RG      VGN L
Sbjct: 24  KVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLL 83

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I +Y+++G +  AR+ FE L  ++ VS+  M+  YA+N   E+A  L  ++   GV  + 
Sbjct: 84  IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTP 143

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           Y  +S+LS  +      +G  IHA+  K GF S   + NA+I++Y RC +   A +VF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCD 203

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  R+ +++ ++I+G A+ G    ALEIF +M   G+ P+ +T  ++L+AC+  G + +G
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
                S   + GI         ++DL  + G +  AL    S   + +V++W   L A
Sbjct: 264 -TQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT-NVVLWNLMLVA 319


>gi|242062548|ref|XP_002452563.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
 gi|241932394|gb|EES05539.1| hypothetical protein SORBIDRAFT_04g028180 [Sorghum bicolor]
          Length = 745

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 255/661 (38%), Positives = 401/661 (60%), Gaps = 36/661 (5%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL--SGFLPDRFTLSGV 289
           D+E+   +F  MT+++ V +  +I   +  G    A+R++L ++   S   P R T+S +
Sbjct: 90  DMEA---LFASMTQRDIVSYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTM 146

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS------------- 336
           V A S L     GKQ H   +R G   +  VG  LVDMYAK ++ G              
Sbjct: 147 VMAASALGDRALGKQFHCQILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNV 206

Query: 337 ---------------VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
                          V+++R++F+ M D + ++WT ++TG+ Q+G  + EA+++F  M  
Sbjct: 207 VMYNTMITGLLRCKMVEEARRLFEVMTDRDSITWTTMVTGFTQNG-LESEALEIFRRMRF 265

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRME 440
             +A + +TF S+L ACG L      +Q++ + + R R  D+  VG++L+ MY++   ++
Sbjct: 266 QGIAIDQYTFGSILTACGALSALEQGKQIHAYII-RTRYDDNVFVGSALVDMYSKCRSIK 324

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A   F  +  KN++S+  ++  Y +N  SE+A  +  E++  G+    YT  S++S  +
Sbjct: 325 LAETVFRRMTCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCA 384

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++ ++ +G Q H   + SG      + NAL+++Y +C ++E A ++F EM   + +SWT+
Sbjct: 385 NLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTA 444

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +++G+A+ G A   +++F KMLA G+KP+G+T+I VLSACS AG + +G  +F SM  +H
Sbjct: 445 LVSGYAQFGRAKETIDLFEKMLAKGVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDH 504

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GIV   +HY CM+DL  RSG L EA EFI+ MP+  D + W T L ACR+ GD E+GK A
Sbjct: 505 GIVPIDDHYTCMIDLYSRSGKLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGKWA 564

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE +LE DPQ+PA+++LL +++A+ G W  VA +R+ M++R + KE GCSWI+  NKVH 
Sbjct: 565 AENLLEIDPQNPASYVLLCSMHAAKGQWNEVAQLRRGMRDRQVKKEPGCSWIKYKNKVHI 624

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F   + SHP +  IY +L+ L  K+ E GY PD + VLH++ +  KV  +  HSEK+A+A
Sbjct: 625 FSADDQSHPCSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIA 684

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLI   +  PIR+ KNLRVC DCH A K+IS +TGR+I++RD+ RFH   DG CSC D+
Sbjct: 685 FGLIFVPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGVCSCGDF 744

Query: 861 W 861
           W
Sbjct: 745 W 745



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 155/562 (27%), Positives = 268/562 (47%), Gaps = 79/562 (14%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           +  P  +  L++ L  +   GR  +A    D M     HP+L TY+ LL +         
Sbjct: 35  LPHPPPTYLLNHLLTAYGKAGRHARARRVFDAMP----HPNLFTYNALLST--------- 81

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
             L H+ L                        L++   +F SM  +RDIVS++++I+ + 
Sbjct: 82  --LAHARL------------------------LSDMEALFASM-TQRDIVSYNAVIAGFS 114

Query: 157 NRGKQVDAIHMFVEMLEL--GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
             G    A+ +++ +L+      P+    S ++ A S   + A+G   +  +L+ G F +
Sbjct: 115 GGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHCQILRLG-FGA 173

Query: 215 DVCVGCALIDMFVKGS-----------VD-------------------LESAYKVFDKMT 244
           +  VG  L+DM+ K S           VD                   +E A ++F+ MT
Sbjct: 174 NAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEEARRLFEVMT 233

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +++++ WT M+T  TQ G   +A+ +F  M   G   D++T   +++AC  L     GKQ
Sbjct: 234 DRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQ 293

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H++ IRT    +V VG +LVDMY+KC    S+  +  VF RM   N++SWTA+I GY Q
Sbjct: 294 IHAYIIRTRYDDNVFVGSALVDMYSKCR---SIKLAETVFRRMTCKNIISWTALIVGYGQ 350

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G  + EAV++FS+M +  + P+ +T  SV+ +C NL       Q +  A+  G      
Sbjct: 351 NGCSE-EAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYIT 409

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V N+L+++Y + G +EDA + F+ +   + VS+  +V  YA+   +++  +L  ++   G
Sbjct: 410 VSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAKG 469

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           V     TF  +LS  S  G + KG    H+     G       Y  +I +YSR   ++ A
Sbjct: 470 VKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGKLKEA 529

Query: 544 FQVFKEME-DRNVISWTSMITG 564
            +  K+M    + I W ++++ 
Sbjct: 530 EEFIKQMPMHPDAIGWGTLLSA 551



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 83/349 (23%), Positives = 157/349 (44%), Gaps = 79/349 (22%)

Query: 427 NSLISMYARSGRMEDARKAF---------------------------ESLF----EKNLV 455
           N L++ Y ++GR   AR+ F                           E+LF    ++++V
Sbjct: 45  NHLLTAYGKAGRHARARRVFDAMPHPNLFTYNALLSTLAHARLLSDMEALFASMTQRDIV 104

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           SYN ++  ++   +  +A  +   +   D+ V  S  T ++++  AS++G    G+Q H 
Sbjct: 105 SYNAVIAGFSGGGSHAQAVRVYLALLQADSSVRPSRITMSTMVMAASALGDRALGKQFHC 164

Query: 514 RIIKSGFESNHCIYNALISMYS-------------------------------RCANVEA 542
           +I++ GF +N  + + L+ MY+                               RC  VE 
Sbjct: 165 QILRLGFGANAFVGSPLVDMYAKMSLVGDAKRAFDEVDSKNVVMYNTMITGLLRCKMVEE 224

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A ++F+ M DR+ I+WT+M+TGF ++G  + ALEIF +M   GI  +  T+ ++L+AC  
Sbjct: 225 ARRLFEVMTDRDSITWTTMVTGFTQNGLESEALEIFRRMRFQGIAIDQYTFGSILTACGA 284

Query: 603 AGLISEGWK-H---FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
              + +G + H    R+ YD++  V      + +VD+  +  S+  A    R M    ++
Sbjct: 285 LSALEQGKQIHAYIIRTRYDDNVFVG-----SALVDMYSKCRSIKLAETVFRRMTCK-NI 338

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYASA 705
           + W   +     +G     + A  +   +++D  DP  + L S + + A
Sbjct: 339 ISWTALIVG---YGQNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCA 384



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 5/210 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++A+     M + G  PD  T   ++ SC    +   G   H L   S L     
Sbjct: 350 QNGCSEEAVRVFSEMQRDGIDPDDYTLGSVISSCANLASLEEGAQFHCLALVSGLMHYIT 409

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L++LY KCG + +A+++F  M +  D VSW++++S Y   G+  + I +F +ML  
Sbjct: 410 VSNALVTLYGKCGSIEDAHRLFDEM-SFHDQVSWTALVSGYAQFGRAKETIDLFEKMLAK 468

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDL 233
           G  P+   F  V+ ACS    V  G   +  + K  G    D    C +ID++ + S  L
Sbjct: 469 GVKPDGVTFIGVLSACSRAGFVEKGRSYFHSMQKDHGIVPIDDHYTC-MIDLYSR-SGKL 526

Query: 234 ESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
           + A +   +M    + +GW  +++ C   G
Sbjct: 527 KEAEEFIKQMPMHPDAIGWGTLLSACRLRG 556


>gi|449482566|ref|XP_004156326.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Cucumis sativus]
          Length = 908

 Score =  506 bits (1304), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 307/889 (34%), Positives = 477/889 (53%), Gaps = 71/889 (7%)

Query: 16  SSFKPSNPSRQNLPPSSSPP--FIAQP----TTSEPLSNRLIYHLNDGRVQKAIFTLDLM 69
           +S   SNP+    P +S+ P  F   P    + SEPL      + +   +      L L 
Sbjct: 48  TSLSLSNPNPCLRPFNSTSPTQFFTSPQHLVSLSEPLFASRSLNTSLSTIASPFDLLRLS 107

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
           T+ G+ PDL                   + VH+     KLE +  + N+LIS Y K G +
Sbjct: 108 TRYGD-PDL------------------ARAVHAQFL--KLEEDIFLGNALISAYLKLGLV 146

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
            +A+K+F  +    ++VS++++IS +     + +A+ +F  ML+ G  PNEY F A++ A
Sbjct: 147 RDADKVFSGLSCP-NVVSYTALISGFSKSDWEDEAVELFFAMLDSGIEPNEYTFVAILTA 205

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNT 248
           C    +  +G  ++G ++K G   S V +  AL+ ++ K G +DL    ++F++M E++ 
Sbjct: 206 CIRNMDYQLGSQVHGIVVKLGLL-SCVFICNALMGLYCKCGFLDL--VLRLFEEMPERDI 262

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
             W  +I+   +     +A   F  M L  G   D F+LS +++AC+       G+QLH+
Sbjct: 263 TSWNTVISSLVKEFKYDEAFDYFRGMQLCKGLKVDHFSLSTLLTACAGSVKPMKGQQLHA 322

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            A++ GL   + V  SL+  Y KC   GS +D   +F+ M   +V++WT +IT Y++ G 
Sbjct: 323 LALKVGLESHLSVSSSLIGFYTKC---GSANDVTDLFETMPIRDVITWTGMITSYMEFGM 379

Query: 368 RD------------------------------KEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            D                                A++LF +M++  V  +  T  S++ A
Sbjct: 380 LDSAVEVFNKMPKRNCISYNAVLAGLSRNDDGSRALELFIEMLEEGVEISDCTLTSIITA 439

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF--ESLFEKNLV 455
           CG L    V++Q+    +K G   + C+  +L+ MY R GRMEDA K F   SL      
Sbjct: 440 CGLLKSFKVSQQIQGFVMKFGILSNSCIETALVDMYTRCGRMEDAEKIFYQRSLENDYTA 499

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
              +M+  YA+N    +A  L H  +  G +        S+LS   SIG    G Q+H  
Sbjct: 500 MLTSMICGYARNGKLNEAISLFHSGQSEGAIVMDEVMSTSILSLCGSIGFHEMGMQMHCH 559

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
            +KSG  +   + NA +SMYS+C N++ A +VF  M  ++++SW  ++ G   H    +A
Sbjct: 560 ALKSGLITETGVGNATVSMYSKCWNMDDAVRVFNTMNMQDIVSWNGLVAGHVLHWQGDKA 619

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHA--GLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           L I+ KM   GIKP+ IT+  ++SA  H    L+      F SM  EH I   +EHYA  
Sbjct: 620 LGIWKKMEKAGIKPDSITFALIISAYKHTELNLVDSCRSLFVSMETEHNIKPTLEHYASF 679

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           + +LGR G L EA + IR+MPL  DV VWR  L +CR++ +  L K AA  IL  +P+DP
Sbjct: 680 ISVLGRWGLLEEAEQTIRNMPLEPDVYVWRALLNSCRINKNERLEKLAARNILAVEPKDP 739

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
            ++IL SNLY+++G W Y   +R+ M+E+   K    SWI  +NK+H F+  + SHP+  
Sbjct: 740 LSYILKSNLYSASGRWYYSEKVREDMREKGFRKHPSQSWIIHENKIHSFYARDRSHPQGK 799

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           +IY+ L+ L L+  + GY+PDT+FVL E+EE QK ++LF HS K+A  FG++ T   KPI
Sbjct: 800 DIYSGLEILILECLKVGYVPDTSFVLQEVEERQKKEFLFYHSGKLAATFGILMTKPGKPI 859

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++ KN+R+CGDCH  +KY+S+VT R+I+LRD++ FH   DG+CSC DYW
Sbjct: 860 QIVKNVRLCGDCHNFLKYVSIVTRRKILLRDTSGFHWFIDGQCSCTDYW 908


>gi|414585731|tpg|DAA36302.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 865

 Score =  506 bits (1303), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 292/826 (35%), Positives = 451/826 (54%), Gaps = 88/826 (10%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           LL      PN +  N +++ Y+K G L++A ++F  M   RD+ SW++++S Y    + +
Sbjct: 61  LLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRM-PARDVASWNTLMSGYFQSRQYL 119

Query: 163 DAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIG--HIIYGFLLKCGYFDS--DVC 217
            ++  F+ M   G   PN +  +  +++C      A+G   +    L     FDS  D  
Sbjct: 120 VSLETFLSMHRSGDSWPNAFTLACAMKSCG-----ALGWHSLALQLLAMVQKFDSQDDSE 174

Query: 218 VGCALIDMFVK-GSVDLES-----------------------------AYKVFDKMTEKN 247
           V  AL+DMFV+ G+VDL S                             A ++FD M E++
Sbjct: 175 VAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERD 234

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W +M++  +Q G  R+A+ + +DM   G   D  T +  ++AC+ L     GKQLH+
Sbjct: 235 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHA 294

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             IR    +D  V  +LV++YAK    G   +++ VF+ + D N ++WT +I+G++Q G 
Sbjct: 295 QVIRNLPHIDPYVASALVELYAK---SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGC 351

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
              E+V+LF+ M    +  + F  A+++  C + +D  +  Q+++  +K G+     V N
Sbjct: 352 F-TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSN 410

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           SLISMYA+   ++ A   F  + EK++VS+ +M+ AY++  N  KA E    + +  V T
Sbjct: 411 SLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVIT 470

Query: 488 -----SAY---------------------------TFASLLSGASSIGAIGKGEQIHARI 515
                 AY                           T+ +L  G + +GA   G+QI  R 
Sbjct: 471 WNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRT 530

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           +K G   +  + NA+I+MYS+C  +  A +VF  +  ++++SW +MITG+++HG   +A+
Sbjct: 531 VKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAI 590

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           EIF  +L  G KP+ I+Y+AVLS CSH+GL+ EG  +F  M   H I   +EH++CMVDL
Sbjct: 591 EIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDL 650

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           LGR+G LTEA + I  MP+     VW   L AC++HG+ EL + AA+ + E D  D  ++
Sbjct: 651 LGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSY 710

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           +L++ +YA AG  +  A IRK M+++ + K  G SW+E DNKVH F   + SHP+ L I 
Sbjct: 711 MLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIR 770

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVF 815
            +LD+L  KI   GY+  T+    E+           HSEK+AVAFGL++     PI + 
Sbjct: 771 KKLDELMEKIARLGYVR-TDSTRSEI----------HHSEKLAVAFGLMTLPTWMPIHIM 819

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KNLR+CGDCHT IK IS VTGRE V+RD+ RFHH   G CSC DYW
Sbjct: 820 KNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 865



 Score =  202 bits (513), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 275/559 (49%), Gaps = 46/559 (8%)

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
           L   L  R K EP     NS+++ Y K   ++ A ++F SM  +RD+VSW+ M+S+    
Sbjct: 191 LASRLFVRIK-EPTMFCRNSMLAGYVKTYGVDHALELFDSM-PERDVVSWNMMVSALSQS 248

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G+  +A+ M V+M   G   +   +++ + AC+   ++  G  ++  +++      D  V
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPHIDPYV 307

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             AL++++ K     + A  VF+ + ++N V WT++I+   Q GC  +++ LF  M    
Sbjct: 308 ASALVELYAKSGC-FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 366

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC------- 331
              D+F L+ ++S C        G+QLHS  +++G    V V  SL+ MYAKC       
Sbjct: 367 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 426

Query: 332 ---------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
                                +  G+V  +R+ FD M + NV++W A++  Y+Q G  ++
Sbjct: 427 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGA-EE 485

Query: 371 EAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           + ++++  M+  + V P+  T+ ++ K C +L  + + +Q+    VK G  +D  V N++
Sbjct: 486 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 545

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I+MY++ GR+ +ARK F+ L  K++VS+N M+  Y+++   ++A E+  +I   G     
Sbjct: 546 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 605

Query: 490 YTFASLLSGASSIGAIGKGE-----QIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
            ++ ++LSG S  G + +G+        A  I  G E   C    ++ +  R  ++  A 
Sbjct: 606 ISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSC----MVDLLGRAGHLTEAK 661

Query: 545 QVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +  +M  +     W ++++    HG    A E+  K + +   P+  +Y+ +    + A
Sbjct: 662 DLIDDMPMKPTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSYMLMAKIYADA 720

Query: 604 GLISEGWKHFRSMYDEHGI 622
           G  S+     R +  + GI
Sbjct: 721 GK-SDDSAQIRKLMRDKGI 738



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 214/429 (49%), Gaps = 46/429 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GRV++A+  +  M  KG   D  TY+  L +C R  +   GK +H+ + R+    +  + 
Sbjct: 249 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 308

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++L+ LY+K G   EA  +F S+ + R+ V+W+ +IS ++  G   +++ +F +M     
Sbjct: 309 SALVELYAKSGCFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 367

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +++  + +I  C +  ++ +G  ++   LK G   + V V  +LI M+ K   +L+SA
Sbjct: 368 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA-VVVSNSLISMYAKCD-NLQSA 425

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQL-------------------------------GCPR 265
             +F  M EK+ V WT MIT  +Q+                               G   
Sbjct: 426 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 485

Query: 266 DAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           D +R++  M+   ++ PD  T   +   C++L     G Q+    ++ GL +D  V  ++
Sbjct: 486 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 545

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           + MY+KC   G + ++RKVFD +   +++SW A+ITGY Q  G  K+A+++F D+++   
Sbjct: 546 ITMYSKC---GRILEARKVFDFLNVKDIVSWNAMITGYSQH-GMGKQAIEIFDDILKRGA 601

Query: 385 APNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRALDDCVG--NSLISMYARSGRME 440
            P++ ++ +VL  C +   S + ++   Y   +KR   +   +   + ++ +  R+G + 
Sbjct: 602 KPDYISYVAVLSGCSH---SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLT 658

Query: 441 DARKAFESL 449
           +A+   + +
Sbjct: 659 EAKDLIDDM 667


>gi|296082276|emb|CBI21281.3| unnamed protein product [Vitis vinifera]
          Length = 785

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 297/847 (35%), Positives = 460/847 (54%), Gaps = 67/847 (7%)

Query: 19  KPSNPSR-QNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPD 77
           KP  P+  QNL   +S   +  P     + N +     D R+ K  F            D
Sbjct: 2   KPFRPNALQNLTSLTSLASLQSPKLRLNVVNNI-----DARIVKTGF------------D 44

Query: 78  LDTYSLLLKSCIRSRNF-HLGKLVHSLLTRSKL-EPNSVILNSLISLYSKCGDLNEANKI 135
            DT     +S  R  NF   G+L  +     K+   N+V  N +IS Y K G+L EA K+
Sbjct: 45  PDTS----RSNFRVGNFLKNGELSQARQLFEKMPHKNTVSTNMMISGYVKSGNLGEARKL 100

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +R  V+W+ +I  Y    +  +A  +FV+M   G  P+   F  ++  C+  E 
Sbjct: 101 FDGMV-ERTAVTWTILIGGYSQLNQFKEAFELFVQMQRCGTEPDYVTFVTLLSGCNGHEM 159

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
                 +   ++K GY DS + VG  L+D + K S  L+ A ++F +M E          
Sbjct: 160 GNQITQVQTQIIKLGY-DSRLIVGNTLVDSYCK-SNRLDLACQLFKEMPE---------- 207

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
                                     D FT + V+ A   L+    G+Q+HS+ I+T   
Sbjct: 208 -------------------------IDSFTFAAVLCANIGLDDIVLGQQIHSFVIKTNFV 242

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            +V V  +L+D Y+K     SV D+RK+FD M + + +S+  II+GY   G + K A  L
Sbjct: 243 WNVFVSNALLDFYSK---HDSVIDARKLFDEMPEQDGVSYNVIISGYAWDG-KHKYAFDL 298

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F ++         F FA++L    N LD  +  Q++   +      +  VGNSL+ MYA+
Sbjct: 299 FRELQFTAFDRKQFPFATMLSIASNTLDWEMGRQIHAQTIVTTADSEILVGNSLVDMYAK 358

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G+ E+A   F +L  ++ V +  M+ AY +    E+  +L +++    V     TFASL
Sbjct: 359 CGKFEEAEMIFTNLTHRSAVPWTAMISAYVQKGFYEEGLQLFNKMRQASVIADQATFASL 418

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L  ++SI ++  G+Q+H+ IIKSGF SN    +AL+ +Y++C +++ A Q F+EM DRN+
Sbjct: 419 LRASASIASLSLGKQLHSFIIKSGFMSNVFSGSALLDVYAKCGSIKDAVQTFQEMPDRNI 478

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW +MI+ +A++G A   L+ F +M+  G++P+ ++++ VLSACSH+GL+ EG  HF S
Sbjct: 479 VSWNAMISAYAQNGEAEATLKSFKEMVLSGLQPDSVSFLGVLSACSHSGLVEEGLWHFNS 538

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M   + +  R EHYA +VD+L RSG   EA + +  MP+  D ++W + L ACR+H + E
Sbjct: 539 MTQIYKLDPRREHYASVVDMLCRSGRFNEAEKLMAEMPIDPDEIMWSSVLNACRIHKNQE 598

Query: 676 LGKHAAEMILE-QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           L + AA+ +   ++ +D A ++ +SN+YA+AG WE V+ + K M++R + K    SW+E 
Sbjct: 599 LARRAADQLFNMEELRDAAPYVNMSNIYAAAGQWENVSKVHKAMRDRGVKKLPAYSWVEI 658

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
            ++ H F   +  HP+  EI  ++D L   ++E GY PDT+  LH  +E+ KV+ L  HS
Sbjct: 659 KHETHMFSANDRCHPQIEEIRKKIDMLTKTMEELGYKPDTSCALHNEDEKFKVESLKYHS 718

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           E++A+AF LIST +  PI V KNLR C DCH AIK IS + GREI +RDS RFHH +DG 
Sbjct: 719 ERLAIAFALISTPEGSPILVMKNLRACIDCHAAIKVISKIVGREITVRDSTRFHHFRDGF 778

Query: 855 CSCNDYW 861
           CSC D+W
Sbjct: 779 CSCGDFW 785


>gi|125545880|gb|EAY92019.1| hypothetical protein OsI_13712 [Oryza sativa Indica Group]
          Length = 804

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 268/704 (38%), Positives = 412/704 (58%), Gaps = 65/704 (9%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           +L+ MF K S  L  A  VF +M E++ V WT+M+    + G   +AI+  LDM   GF 
Sbjct: 103 SLLSMFAK-SGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--------- 331
           P +FTL+ V+S+C+  +    G+++HS+ ++ GL   V V  S+++MY KC         
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221

Query: 332 -------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
                              T  G +D +  +F+ M   +++SW A+I GY Q+G  D +A
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNG-LDAKA 280

Query: 373 VKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           +KLFS M+ +  +AP+ FT  SVL AC NL +  + +QV+ + ++   A +  V N+LIS
Sbjct: 281 LKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQVTNALIS 340

Query: 432 MYARSGRMEDARK-------------AFESLFE--------------------KNLVSYN 458
            YA+SG +E+AR+             +F +L E                    +++V++ 
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGVMNNRDVVAWT 400

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  Y +N  +++A +L   +   G   ++YT A++LS  +S+  +  G+QIH R I+S
Sbjct: 401 AMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYGKQIHCRAIRS 460

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEI 577
             E +  + NA+I+MY+R  +   A ++F ++   +  I+WTSMI   A+HG    A+ +
Sbjct: 461 LLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQHGQGEEAVGL 520

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +ML  G++P+ ITY+ VLSACSHAG ++EG +++  + +EH I   M HYACMVDLL 
Sbjct: 521 FEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMSHYACMVDLLA 580

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G  +EA EFIR MP+  D + W + L ACRVH + EL + AAE +L  DP +  A+  
Sbjct: 581 RAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           ++N+Y++ G W   A I K  KE+ + KE G SW    +K+H F   +  HP+   +YA 
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWTHIRSKIHVFGADDVVHPQRDAVYAM 700

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
             ++  +IK  G++PD   VLH++++E K + L +HSEK+A+AFGLIST +   +RV KN
Sbjct: 701 AARMWEEIKGAGFVPDLQSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRVMKN 760

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVC DCH AIK IS VT REI++RD+ RFHH +DG CSC DYW
Sbjct: 761 LRVCNDCHAAIKAISKVTDREIIVRDATRFHHFRDGLCSCKDYW 804



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 161/573 (28%), Positives = 277/573 (48%), Gaps = 83/573 (14%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N    NSL+S+++K G L +A  +F  M  +RD VSW+ M+      G+  +AI   ++M
Sbjct: 97  NVFTWNSLLSMFAKSGRLADARGVFAEM-PERDAVSWTVMVVGLNRAGRFGEAIKTLLDM 155

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              GF P ++  + V+ +C+ T+  A+G  ++ F++K G   S V V  ++++M+ K   
Sbjct: 156 TADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLG-LGSCVPVANSVLNMYGKCG- 213

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQL------------------------------ 261
           D E+A  VF++M  ++   W  M++  T L                              
Sbjct: 214 DAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQ 273

Query: 262 -GCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
            G    A++LF  M+  S   PD FT++ V+SAC+ L     GKQ+H++ +RT +A +  
Sbjct: 274 NGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAYILRTEMAYNSQ 333

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRML--DHNVMSWTAIITGYVQSG----------- 366
           V  +L+  YAK    GSV+++R++ D+ +  D NV+S+TA++ GYV+ G           
Sbjct: 334 VTNALISTYAK---SGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAREMFGV 390

Query: 367 -------------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
                              GR+ EA+ LF  MI     PN +T A+VL  C +L   +  
Sbjct: 391 MNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSVCASLACLDYG 450

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
           +Q++  A++        V N++I+MYARSG    AR+ F+ + + K  +++ +M+ A A+
Sbjct: 451 KQIHCRAIRSLLERSSSVSNAIITMYARSGSFPWARRMFDQVCWRKETITWTSMIVALAQ 510

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS---GFESN 523
           +   E+A  L  E+   GV     T+  +LS  S  G + +G++ + +I        E +
Sbjct: 511 HGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFVNEGKRYYDQIKNEHQIAPEMS 570

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
           H  Y  ++ + +R      A +  + M  + + I+W S+++    H  A  A     K+L
Sbjct: 571 H--YACMVDLLARAGLFSEAQEFIRRMPVEPDAIAWGSLLSACRVHKNAELAELAAEKLL 628

Query: 583 ADGIKPN---GITYIA-VLSACSHAGLISEGWK 611
           +  I PN     + IA V SAC      +  WK
Sbjct: 629 S--IDPNNSGAYSAIANVYSACGRWSDAARIWK 659



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 160/575 (27%), Positives = 255/575 (44%), Gaps = 114/575 (19%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR  +AI TL  MT  G  P   T + +L SC  ++   +G+ VHS + +  L     + 
Sbjct: 143 GRFGEAIKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVA 202

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNK------------------------------RDIV 146
           NS++++Y KCGD   A+ +F+ M  +                              R IV
Sbjct: 203 NSVLNMYGKCGDAETASTVFERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIV 262

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           SW++MI+ Y   G    A+ +F  ML E    P+E+  ++V+ AC+N  NV IG  ++ +
Sbjct: 263 SWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGNVRIGKQVHAY 322

Query: 206 LLKCGY-FDSDVCVGCALIDMFVK-GSV-------------------------------D 232
           +L+    ++S V    ALI  + K GSV                               D
Sbjct: 323 ILRTEMAYNSQVT--NALISTYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGD 380

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +ESA ++F  M  ++ V WT MI    Q G   +AI LF  MI  G  P+ +TL+ V+S 
Sbjct: 381 MESAREMFGVMNNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNSYTLAAVLSV 440

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHN 351
           C+ L     GKQ+H  AIR+ L     V  +++ MYA+    GS   +R++FD++     
Sbjct: 441 CASLACLDYGKQIHCRAIRSLLERSSSVSNAIITMYAR---SGSFPWARRMFDQVCWRKE 497

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++WT++I    Q  G+ +EAV LF +M++  V P+  T+  VL AC             
Sbjct: 498 TITWTSMIVALAQH-GQGEEAVGLFEEMLRAGVEPDRITYVGVLSAC------------- 543

Query: 412 THA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +HA  V  G+   D + N                   E      +  Y  MVD  A+   
Sbjct: 544 SHAGFVNEGKRYYDQIKN-------------------EHQIAPEMSHYACMVDLLARAGL 584

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A E +  +    V   A  + SLLS A  +    +  ++ A  + S   +N   Y+A
Sbjct: 585 FSEAQEFIRRMP---VEPDAIAWGSLLS-ACRVHKNAELAELAAEKLLSIDPNNSGAYSA 640

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNV-----ISWT 559
           + ++YS C     A +++K  +++ V      SWT
Sbjct: 641 IANVYSACGRWSDAARIWKARKEKAVRKETGFSWT 675



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 189/411 (45%), Gaps = 51/411 (12%)

Query: 36  FIAQPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRN 93
           F + P  S    N +I   N +G   KA+     M  + +  PD  T + +L +C    N
Sbjct: 253 FESMPGRSIVSWNAMIAGYNQNGLDAKALKLFSRMLHESSMAPDEFTITSVLSACANLGN 312

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG-------------------------- 127
             +GK VH+ + R+++  NS + N+LIS Y+K G                          
Sbjct: 313 VRIGKQVHAYILRTEMAYNSQVTNALISTYAKSGSVENARRIMDQSMETDLNVISFTALL 372

Query: 128 -------DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
                  D+  A ++F  M N RD+V+W++MI  Y   G+  +AI +F  M+  G  PN 
Sbjct: 373 EGYVKIGDMESAREMFGVM-NNRDVVAWTAMIVGYEQNGRNDEAIDLFRSMITCGPEPNS 431

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           Y  +AV+  C++   +  G  I+   ++    +    V  A+I M+ + S     A ++F
Sbjct: 432 YTLAAVLSVCASLACLDYGKQIHCRAIR-SLLERSSSVSNAIITMYAR-SGSFPWARRMF 489

Query: 241 DKMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           D++   K T+ WT MI    Q G   +A+ LF +M+ +G  PDR T  GV+SACS     
Sbjct: 490 DQVCWRKETITWTSMIVALAQHGQGEEAVGLFEEMLRAGVEPDRITYVGVLSACSHAGFV 549

Query: 300 TSGKQLHSWAIRT--GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWT 356
             GK+ +   I+    +A ++     +VD+ A+    G   ++++   RM ++ + ++W 
Sbjct: 550 NEGKRYYD-QIKNEHQIAPEMSHYACMVDLLARA---GLFSEAQEFIRRMPVEPDAIAWG 605

Query: 357 AIITG-YVQSGGRDKE--AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           ++++   V       E  A KL S  I    +  +   A+V  ACG   D+
Sbjct: 606 SLLSACRVHKNAELAELAAEKLLS--IDPNNSGAYSAIANVYSACGRWSDA 654



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 135/285 (47%), Gaps = 34/285 (11%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           NSL+SM+A+SGR+ DAR  F  + E++ VS+  MV    +     +A + L ++   G  
Sbjct: 102 NSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEAIKTLLDMTADGFT 161

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + +T  ++LS  +   A   G ++H+ ++K G  S   + N++++MY +C + E A  V
Sbjct: 162 PTQFTLTNVLSSCAVTQAGAVGRKVHSFVVKLGLGSCVPVANSVLNMYGKCGDAETASTV 221

Query: 547 FKE-------------------------------MEDRNVISWTSMITGFAKHGFAARAL 575
           F+                                M  R+++SW +MI G+ ++G  A+AL
Sbjct: 222 FERMPVRSVSSWNAMVSLNTHLGRMDLAESLFESMPGRSIVSWNAMIAGYNQNGLDAKAL 281

Query: 576 EIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           ++F +ML +  + P+  T  +VLSAC++ G +  G K   +      +    +    ++ 
Sbjct: 282 KLFSRMLHESSMAPDEFTITSVLSACANLGNVRIG-KQVHAYILRTEMAYNSQVTNALIS 340

Query: 635 LLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGDTELGK 678
              +SGS+  A   + +SM    +V+ +   L      GD E  +
Sbjct: 341 TYAKSGSVENARRIMDQSMETDLNVISFTALLEGYVKIGDMESAR 385



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 58/238 (24%), Positives = 93/238 (39%), Gaps = 49/238 (20%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGF------------------------------- 520
           +A LL    +    G G  IHAR +K+G                                
Sbjct: 29  YARLLQLCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYGETAGGAGGLRDARRLF 88

Query: 521 ------ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
                   N   +N+L+SM+++   +  A  VF EM +R+ +SWT M+ G  + G    A
Sbjct: 89  DEIPLARRNVFTWNSLLSMFAKSGRLADARGVFAEMPERDAVSWTVMVVGLNRAGRFGEA 148

Query: 575 LEIFYKMLADGIKPNGITYIAVLSAC--SHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           ++    M ADG  P   T   VLS+C  + AG +    +   S   + G+   +     +
Sbjct: 149 IKTLLDMTADGFTPTQFTLTNVLSSCAVTQAGAVG---RKVHSFVVKLGLGSCVPVANSV 205

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK-HAAEMILEQDP 689
           +++ G+ G    A      MP+ + V  W        V  +T LG+   AE + E  P
Sbjct: 206 LNMYGKCGDAETASTVFERMPVRS-VSSWNAM-----VSLNTHLGRMDLAESLFESMP 257


>gi|242032827|ref|XP_002463808.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
 gi|241917662|gb|EER90806.1| hypothetical protein SORBIDRAFT_01g006560 [Sorghum bicolor]
          Length = 803

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 267/704 (37%), Positives = 415/704 (58%), Gaps = 65/704 (9%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           +L+ M+ K S  L  A  VF +M E++ V WT+M+    + G   DA++ FLDM+  G  
Sbjct: 102 SLLSMYAK-SGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDAVKTFLDMVGEGLA 160

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--------- 331
           P +F L+ V+S+C+  E    G+++HS+ I+ GL+  V V  S++ MY KC         
Sbjct: 161 PSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYMYGKCGDAETARAV 220

Query: 332 -------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
                              T  G +D +  +F+ M + +++SW AII GY Q+G  D  A
Sbjct: 221 FERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNG-LDDMA 279

Query: 373 VKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           +K FS M+    + P+ FT  SVL AC NL    + +Q++++ ++ G      + N+LIS
Sbjct: 280 LKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMNALIS 339

Query: 432 MYARSGRMEDARK-------------AFESLFE--------------------KNLVSYN 458
            YA+SG +E AR+             +F +L E                    ++++++ 
Sbjct: 340 TYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDVIAWT 399

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  Y +N  +++A EL   +  +G   +++T A++LS  +S+  +G G+QIH R I+S
Sbjct: 400 AMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRS 459

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEI 577
             E +  + NA+I++Y+R  +V  A +VF ++   +  ++WTSMI   A+HG   +A+ +
Sbjct: 460 LQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVL 519

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +ML  G+KP+ +TYI V SAC+HAG I +G +++  M +EHGIV  M HYACMVDLL 
Sbjct: 520 FEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLA 579

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G LTEA EFI+ MP++ D +VW + L ACRV  + +L + AAE +L  DP +  A+  
Sbjct: 580 RAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLSIDPDNSGAYSA 639

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           L+N+Y++ G W   A I K  K++ + KE G SW    +KVH F   +  HP+   I  +
Sbjct: 640 LANVYSACGRWNDAARIWKLRKDKAVKKETGFSWTHVQSKVHVFGADDVLHPQRDAICKK 699

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
             ++  +IK+ G++PD N VLH++++E K + L +HSEK+A+AFGLIST +   +R+ KN
Sbjct: 700 AAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRIMKN 759

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVC DCHTAIK+IS V  REI++RD+ RFHH +DG CSC DYW
Sbjct: 760 LRVCNDCHTAIKFISKVVDREIIVRDATRFHHFRDGYCSCKDYW 803



 Score =  212 bits (540), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 275/569 (48%), Gaps = 75/569 (13%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N+   NSL+S+Y+K G L +A  +F  M  +RD VSW+ M+      G+  DA+  F++M
Sbjct: 96  NAFTWNSLLSMYAKSGRLADARVVFAQM-PERDAVSWTVMVVGLNRAGRFWDAVKTFLDM 154

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           +  G  P+++  + V+ +C+ TE   IG  ++ F++K G   S V V  +++ M+ K   
Sbjct: 155 VGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLG-LSSCVPVANSVLYMYGKCG- 212

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM----------ILSGF-- 279
           D E+A  VF++M  ++   W  M++  T  G    A+ +F +M          I++G+  
Sbjct: 213 DAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQ 272

Query: 280 --------------------LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                                PD FT++ V+SAC+ L +   GKQ+HS+ +RTG+     
Sbjct: 273 NGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQ 332

Query: 320 VGCSLVDMYAKC-TVD-----------------------------GSVDDSRKVFDRMLD 349
           +  +L+  YAK  +V+                             G    +R+VFD M +
Sbjct: 333 IMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNN 392

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V++WTA+I GY Q+G  D EA++LF  MI+    PN  T A+VL AC +L      +Q
Sbjct: 393 RDVIAWTAMIVGYEQNGQND-EAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQ 451

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNL 468
           ++  A++  +     V N++I++YARSG +  AR+ F+ + + K  V++ +M+ A A++ 
Sbjct: 452 IHCRAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG 511

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIY 527
             E+A  L  E+   GV     T+  + S  +  G I KG++ + +++ + G       Y
Sbjct: 512 LGEQAIVLFEEMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHY 571

Query: 528 NALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             ++ + +R   +  A +  + M    + + W S++        A  A     K+L+  I
Sbjct: 572 ACMVDLLARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAEKLLS--I 629

Query: 587 KP-NGITYIA---VLSACSHAGLISEGWK 611
            P N   Y A   V SAC      +  WK
Sbjct: 630 DPDNSGAYSALANVYSACGRWNDAARIWK 658



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 145/578 (25%), Positives = 245/578 (42%), Gaps = 120/578 (20%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR   A+ T   M  +G  P     + +L SC  +    +G+ VHS + +  L     + 
Sbjct: 142 GRFWDAVKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVA 201

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NS++ +Y KCGD   A  +F+ M   R   SW++M+S Y ++G+   A+ MF  M E   
Sbjct: 202 NSVLYMYGKCGDAETARAVFERM-KVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSI 260

Query: 177 C--------------------------------PNEYCFSAVIRACSNTENVAIGHIIYG 204
                                            P+E+  ++V+ AC+N   + +G  ++ 
Sbjct: 261 VSWNAIIAGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHS 320

Query: 205 FLLKCGY--------------------------------FDSDVCVGCALIDMFVKGSVD 232
           ++L+ G                                  D +V    AL++ +VK   D
Sbjct: 321 YILRTGMPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLG-D 379

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            + A +VFD M  ++ + WT MI    Q G   +A+ LF  MI SG  P+  TL+ V+SA
Sbjct: 380 TKQAREVFDVMNNRDVIAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSA 439

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHN 351
           C+ L     GKQ+H  AIR+     V V  +++ +YA+    GSV  +R+VFD++     
Sbjct: 440 CASLAYLGYGKQIHCRAIRSLQEQSVSVSNAIITVYAR---SGSVPLARRVFDQICWRKE 496

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++WT++I    Q  G  ++A+ LF +M++  V P+  T+  V  AC             
Sbjct: 497 TVTWTSMIVALAQH-GLGEQAIVLFEEMLRVGVKPDRVTYIGVFSAC------------- 542

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN-----LVSYNTMVDAYAK 466
           THA                      G ++  ++ +E +  ++     +  Y  MVD  A+
Sbjct: 543 THA----------------------GFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLAR 580

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
                +A E +  +    V      + SLL+ A  +       ++ A  + S    N   
Sbjct: 581 AGLLTEAHEFIQRMP---VAPDTVVWGSLLA-ACRVRKNADLAELAAEKLLSIDPDNSGA 636

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNV-----ISWT 559
           Y+AL ++YS C     A +++K  +D+ V      SWT
Sbjct: 637 YSALANVYSACGRWNDAARIWKLRKDKAVKKETGFSWT 674



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 121/486 (24%), Positives = 213/486 (43%), Gaps = 116/486 (23%)

Query: 300 TSGKQLHSWAIRTGLALD---------------VCVGC---------------------- 322
           ++G+ +H+ A++ GL +                V  GC                      
Sbjct: 42  SAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLFDDIPYARRNAFTWN 101

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           SL+ MYAK    G + D+R VF +M + + +SWT ++ G +   GR  +AVK F DM+  
Sbjct: 102 SLLSMYAK---SGRLADARVVFAQMPERDAVSWTVMVVG-LNRAGRFWDAVKTFLDMVGE 157

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV----------------- 425
            +AP+ F   +VL +C       +  +V++  +K G  L  CV                 
Sbjct: 158 GLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLG--LSSCVPVANSVLYMYGKCGDAE 215

Query: 426 ----------------GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
                            N+++S+Y   GRM+ A   FE++ E+++VS+N ++  Y +N  
Sbjct: 216 TARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAIIAGYNQNGL 275

Query: 470 SEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
            + A +     +  + +    +T  S+LS  +++  +  G+Q+H+ I+++G   +  I N
Sbjct: 276 DDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMGKQMHSYILRTGMPYSSQIMN 335

Query: 529 ALISMYSRCANVEA---------------------------------AFQVFKEMEDRNV 555
           ALIS Y++  +VE                                  A +VF  M +R+V
Sbjct: 336 ALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREVFDVMNNRDV 395

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFR 614
           I+WT+MI G+ ++G    A+E+F  M+  G +PN  T  AVLSAC+    +  G + H R
Sbjct: 396 IAWTAMIVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCR 455

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           ++       Q +     ++ +  RSGS+  A      +    + + W + + A   HG  
Sbjct: 456 AIRSLQE--QSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHG-- 511

Query: 675 ELGKHA 680
            LG+ A
Sbjct: 512 -LGEQA 516



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 82/368 (22%), Positives = 157/368 (42%), Gaps = 71/368 (19%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR--------------- 435
           FA +L+     ++ +    ++ HAVK G  +   + N+L+S YAR               
Sbjct: 28  FARLLQLSQTAVNPSAGRAIHAHAVKAGLLVSAYLCNNLLSYYARAGVGRGCFHEARRLF 87

Query: 436 ----------------------SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
                                 SGR+ DAR  F  + E++ VS+  MV    +      A
Sbjct: 88  DDIPYARRNAFTWNSLLSMYAKSGRLADARVVFAQMPERDAVSWTVMVVGLNRAGRFWDA 147

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +   ++   G+  S +   ++LS  ++  A G G ++H+ +IK G  S   + N+++ M
Sbjct: 148 VKTFLDMVGEGLAPSQFMLTNVLSSCAATEARGIGRKVHSFVIKLGLSSCVPVANSVLYM 207

Query: 534 YSRCANVEAAFQVFKE-------------------------------MEDRNVISWTSMI 562
           Y +C + E A  VF+                                ME+R+++SW ++I
Sbjct: 208 YGKCGDAETARAVFERMKVRSESSWNAMVSLYTHQGRMDLALSMFENMEERSIVSWNAII 267

Query: 563 TGFAKHGFAARALEIFYKML-ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
            G+ ++G    AL+ F +ML A  ++P+  T  +VLSAC++  ++  G K   S     G
Sbjct: 268 AGYNQNGLDDMALKFFSRMLTASSMEPDEFTVTSVLSACANLRMLKMG-KQMHSYILRTG 326

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           +    +    ++    +SGS+  A   + +++    +V+ +   L      GDT+  +  
Sbjct: 327 MPYSSQIMNALISTYAKSGSVETARRIMDKAVVADLNVISFTALLEGYVKLGDTKQAREV 386

Query: 681 AEMILEQD 688
            +++  +D
Sbjct: 387 FDVMNNRD 394



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 68/294 (23%), Positives = 133/294 (45%), Gaps = 13/294 (4%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +  +G+  +A+     M + G  P+  T + +L +C        GK +H    RS  
Sbjct: 402 IVGYEQNGQNDEAMELFRSMIRSGPEPNSHTLAAVLSACASLAYLGYGKQIHCRAIRSLQ 461

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E +  + N++I++Y++ G +  A ++F  +  +++ V+W+SMI +    G    AI +F 
Sbjct: 462 EQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETVTWTSMIVALAQHGLGEQAIVLFE 521

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           EML +G  P+   +  V  AC++   +  G   Y  +L       ++     ++D+  + 
Sbjct: 522 EMLRVGVKPDRVTYIGVFSACTHAGFIDKGKRYYEQMLNEHGIVPEMSHYACMVDLLARA 581

Query: 230 SVDLESAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR----F 284
            + L  A++   +M    +TV W  ++  C ++    D   L  + +LS   PD      
Sbjct: 582 GL-LTEAHEFIQRMPVAPDTVVWGSLLAAC-RVRKNADLAELAAEKLLS-IDPDNSGAYS 638

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
            L+ V SAC     +    ++  W +R   A+    G S   + +K  V G+ D
Sbjct: 639 ALANVYSACGR---WNDAARI--WKLRKDKAVKKETGFSWTHVQSKVHVFGADD 687


>gi|357113684|ref|XP_003558631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 802

 Score =  506 bits (1302), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 264/707 (37%), Positives = 415/707 (58%), Gaps = 71/707 (10%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           +L+ ++ K S  L  A  VF +M E++ V WT+M+    ++G   +AI++FLDM+  G  
Sbjct: 101 SLLSLYAK-SGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P +FTL+ V+S+C+  E    G+++HS+ ++ GL+  V V  S+++MY KC   G  + +
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKC---GDAETA 216

Query: 341 RKVFDRML-------------------------------DHNVMSWTAIITGYVQSGGRD 369
           R VF+RM                                D  ++SW A+I GY Q+G  +
Sbjct: 217 RAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNG-LN 275

Query: 370 KEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            +A+  FS M+    +AP+ FT  SVL AC NL   ++ +QV+ + ++        V N+
Sbjct: 276 AKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYIGQVTNA 335

Query: 429 LISMYARSGRMEDAR---------------------------------KAFESLFEKNLV 455
           LISMYA+SG +E+AR                                 + F+ +  +++V
Sbjct: 336 LISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDVMSNRDVV 395

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           ++  M+  Y +N ++++A EL   +  +G   ++YT A++LS  +S+  +  G+QIH + 
Sbjct: 396 AWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKA 455

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN-VISWTSMITGFAKHGFAARA 574
           I+S  E +  + N++++MY+R  ++  A +VF  +  R   ++WTSMI   A+HG    A
Sbjct: 456 IRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDA 515

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           + +F +ML  G+KP+ IT++ VLSAC+H G + EG ++F+ + D+HGIV  M HYACMVD
Sbjct: 516 VGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVD 575

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LL R+G  +EA EFI+ MP+  D + W + L ACRVH + +L + AAE +L  DP +  A
Sbjct: 576 LLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKLLSIDPGNSGA 635

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           +  LSN+Y++ G W   A I KR K++++ KE G SW    N+VH F   +  HP+   +
Sbjct: 636 YSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTV 695

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRV 814
           Y    ++   IK+ G++PD   VLH++++E K + L +HSEK+A+AFGL+ST +   +R+
Sbjct: 696 YRTAAKMWDDIKKAGFVPDLQSVLHDVDDELKEEMLSRHSEKLAIAFGLVSTPEKTTLRI 755

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            KNLRVC DCHTAIK+IS V  REI+LRD+ RFHH KDG CSC DYW
Sbjct: 756 MKNLRVCNDCHTAIKFISKVADREIILRDATRFHHFKDGFCSCKDYW 802



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 164/574 (28%), Positives = 282/574 (49%), Gaps = 81/574 (14%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + N    NSL+SLY+K G L +A  +F  M  +RD VSW+ M+      G+  +AI MF+
Sbjct: 93  QRNVFTWNSLLSLYAKSGRLADARAVFAEM-PERDPVSWTVMVVGLNRVGRFGEAIKMFL 151

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M+  G  P ++  + V+ +C+ TE   +G  ++ F++K G   S V V  ++++M+ K 
Sbjct: 152 DMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLG-LSSCVPVANSVLNMYGKC 210

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM----------ILSGF 279
             D E+A  VF++M E++   W  M++    LG    A+ LF +M          +++G+
Sbjct: 211 G-DAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGY 269

Query: 280 ----------------------LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
                                  PD FT++ V+SAC+ L + + GKQ+H++ +R+ +   
Sbjct: 270 NQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPYI 329

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKV---------------------------------F 344
             V  +L+ MYAK    GSV+++R V                                 F
Sbjct: 330 GQVTNALISMYAK---SGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMF 386

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           D M + +V++WTA+I GY Q+G  D EA++LF  MI+    PN +T A+VL  C +L   
Sbjct: 387 DVMSNRDVVAWTAMIVGYEQNGHND-EAMELFRLMIRSGPEPNSYTVAAVLSVCASLACL 445

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
              +Q++  A++  +     V NS+++MYARSG +  AR+ F+ + + K  V++ +M+ A
Sbjct: 446 EYGKQIHCKAIRSLQEQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVA 505

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFES 522
            A++   E A  L  E+   GV     TF  +LS  + +G + +G++   ++  K G   
Sbjct: 506 LAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVP 565

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKM 581
               Y  ++ + +R      A +  ++M  + + I+W S+++    H  A  A     K+
Sbjct: 566 EMSHYACMVDLLARAGLFSEAQEFIQQMPVEPDAIAWGSLLSACRVHKNADLAELAAEKL 625

Query: 582 LADGIKP-NGITYIA---VLSACSHAGLISEGWK 611
           L+  I P N   Y A   V SAC      ++ WK
Sbjct: 626 LS--IDPGNSGAYSALSNVYSACGRWNDAAKIWK 657



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 163/593 (27%), Positives = 257/593 (43%), Gaps = 126/593 (21%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR  +AI     M   G  P   T + +L SC  +    +G+ VHS + +  L     + 
Sbjct: 141 GRFGEAIKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVA 200

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNK------------------------------RDIV 146
           NS++++Y KCGD   A  +F+ M  +                              R IV
Sbjct: 201 NSVLNMYGKCGDAETARAVFERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIV 260

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           SW+++I+ Y   G    A+  F  ML      P+E+  ++V+ AC+N   V+IG  ++ +
Sbjct: 261 SWNAVIAGYNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAY 320

Query: 206 LLKC--GYFDSDVCVGCALIDMFVK-GSV------------------------------- 231
           +L+    Y      V  ALI M+ K GSV                               
Sbjct: 321 ILRSRMPYIGQ---VTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLG 377

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D++ A ++FD M+ ++ V WT MI    Q G   +A+ LF  MI SG  P+ +T++ V+S
Sbjct: 378 DMKHAREMFDVMSNRDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLS 437

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDH 350
            C+ L     GKQ+H  AIR+       V  S+V MYA+    GS+  +R+VFDR+    
Sbjct: 438 VCASLACLEYGKQIHCKAIRSLQEQSSSVSNSIVTMYAR---SGSLPWARRVFDRVHWRK 494

Query: 351 NVMSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             ++WT++I    Q G G D  AV LF +M++  V P+  TF  VL AC           
Sbjct: 495 ETVTWTSMIVALAQHGLGED--AVGLFEEMLRVGVKPDRITFVGVLSAC----------- 541

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN-----LVSYNTMVDAY 464
             TH                       G +++ ++ F+ L +K+     +  Y  MVD  
Sbjct: 542 --THV----------------------GFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLL 577

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           A+     +A E + ++    V   A  + SLLS A  +       ++ A  + S    N 
Sbjct: 578 ARAGLFSEAQEFIQQMP---VEPDAIAWGSLLS-ACRVHKNADLAELAAEKLLSIDPGNS 633

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNV-----ISWTSMITGFAKHGFAA 572
             Y+AL ++YS C     A +++K  +D++V      SWT +  G   H F A
Sbjct: 634 GAYSALSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHI--GNRVHVFGA 684



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 120/482 (24%), Positives = 205/482 (42%), Gaps = 94/482 (19%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y+ N    +   F   +++     PD  T + +L +C       +GK VH+ + RS++  
Sbjct: 269 YNQNGLNAKALWFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIGKQVHAYILRSRMPY 328

Query: 112 NSVILNSLISLYSKC---------------------------------GDLNEANKIFKS 138
              + N+LIS+Y+K                                  GD+  A ++F  
Sbjct: 329 IGQVTNALISMYAKSGSVENARGVMQQAVMADLNVISFTALLEGYVKLGDMKHAREMFDV 388

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           M N RD+V+W++MI  Y   G   +A+ +F  M+  G  PN Y  +AV+  C++   +  
Sbjct: 389 MSN-RDVVAWTAMIVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEY 447

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITR 257
           G  I+   ++    +    V  +++ M+ + S  L  A +VFD++   K TV WT MI  
Sbjct: 448 GKQIHCKAIR-SLQEQSSSVSNSIVTMYAR-SGSLPWARRVFDRVHWRKETVTWTSMIVA 505

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G   DA+ LF +M+  G  PDR T  GV+SAC+ +                     
Sbjct: 506 LAQHGLGEDAVGLFEEMLRVGVKPDRITFVGVLSACTHV--------------------- 544

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNV---MSWTAIITGYVQSGGRDKEAV 373
                            G VD+ ++ F ++ D H +   MS  A +   +   G   EA 
Sbjct: 545 -----------------GFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARAGLFSEAQ 587

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS----- 428
           +    M    V P+   + S+L AC    ++++AE     A ++  ++D   GNS     
Sbjct: 588 EFIQQM---PVEPDAIAWGSLLSACRVHKNADLAEL----AAEKLLSIDP--GNSGAYSA 638

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-LNSEKAFELLHEIEDTGVGT 487
           L ++Y+  GR  DA K ++   +K++         +  N ++   A ++LH   DT   T
Sbjct: 639 LSNVYSACGRWNDAAKIWKRRKDKSVKKETGFSWTHIGNRVHVFGADDVLHPQRDTVYRT 698

Query: 488 SA 489
           +A
Sbjct: 699 AA 700



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 82/319 (25%), Positives = 152/319 (47%), Gaps = 47/319 (14%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           NSL+S+YA+SGR+ DAR  F  + E++ VS+  MV    +     +A ++  ++   G+ 
Sbjct: 100 NSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEAIKMFLDMVTDGLS 159

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA---- 542
            + +T  ++LS  ++  A G G ++H+ ++K G  S   + N++++MY +C + E     
Sbjct: 160 PTQFTLTNVLSSCAATEARGVGRKVHSFVVKLGLSSCVPVANSVLNMYGKCGDAETARAV 219

Query: 543 ---------------------------AFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
                                      A  +F+ M DR ++SW ++I G+ ++G  A+AL
Sbjct: 220 FERMPERSVSSWNAMVSLDAHLGRMDLALSLFENMPDRTIVSWNAVIAGYNQNGLNAKAL 279

Query: 576 EIFYKMLA-DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA---- 630
             F +ML+   + P+  T  +VLSAC++ G++S G          + +  RM +      
Sbjct: 280 WFFSRMLSYSTMAPDEFTITSVLSACANLGMVSIG-----KQVHAYILRSRMPYIGQVTN 334

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG--KHAAEMILEQD 688
            ++ +  +SGS+  A   ++   ++   ++  T L    + G  +LG  KHA EM     
Sbjct: 335 ALISMYAKSGSVENARGVMQQAVMADLNVISFTAL----LEGYVKLGDMKHAREMFDVMS 390

Query: 689 PQDPAAHILLSNLYASAGH 707
            +D  A   +   Y   GH
Sbjct: 391 NRDVVAWTAMIVGYEQNGH 409



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/209 (23%), Positives = 99/209 (47%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +  +G   +A+    LM + G  P+  T + +L  C        GK +H    RS  
Sbjct: 401 IVGYEQNGHNDEAMELFRLMIRSGPEPNSYTVAAVLSVCASLACLEYGKQIHCKAIRSLQ 460

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E +S + NS++++Y++ G L  A ++F  +  +++ V+W+SMI +    G   DA+ +F 
Sbjct: 461 EQSSSVSNSIVTMYARSGSLPWARRVFDRVHWRKETVTWTSMIVALAQHGLGEDAVGLFE 520

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           EML +G  P+   F  V+ AC++   V  G   +  L        ++     ++D+  + 
Sbjct: 521 EMLRVGVKPDRITFVGVLSACTHVGFVDEGKRYFQQLQDKHGIVPEMSHYACMVDLLARA 580

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRC 258
            +  E+   +     E + + W  +++ C
Sbjct: 581 GLFSEAQEFIQQMPVEPDAIAWGSLLSAC 609



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 80/205 (39%), Gaps = 51/205 (24%)

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGF-------------------------------- 520
           A LL    +    G G  IHAR +K+G                                 
Sbjct: 27  ARLLQRCQTAANPGAGRAIHARAVKAGLLASAYLCNNLLSYYAGPAAGGGGGFREARRLF 86

Query: 521 ------ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
                 + N   +N+L+S+Y++   +  A  VF EM +R+ +SWT M+ G  + G    A
Sbjct: 87  DEIPAAQRNVFTWNSLLSLYAKSGRLADARAVFAEMPERDPVSWTVMVVGLNRVGRFGEA 146

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC--- 631
           +++F  M+ DG+ P   T   VLS+C+       G K        H  V ++   +C   
Sbjct: 147 IKMFLDMVTDGLSPTQFTLTNVLSSCAATEARGVGRK-------VHSFVVKLGLSSCVPV 199

Query: 632 ---MVDLLGRSGSLTEALEFIRSMP 653
              ++++ G+ G    A      MP
Sbjct: 200 ANSVLNMYGKCGDAETARAVFERMP 224


>gi|449438556|ref|XP_004137054.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
 gi|449479088|ref|XP_004155501.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Cucumis sativus]
          Length = 855

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 281/795 (35%), Positives = 443/795 (55%), Gaps = 58/795 (7%)

Query: 120 ISLYSKCGDLNEANKIFKSM-GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           +  Y +CG   EA  + + +  +   +  W+++I   V  G   D +  + +M  LG+ P
Sbjct: 66  VGAYIECGASAEAVSLLQRLIPSHSTVFWWNALIRRSVKLGLLDDTLGFYCQMQRLGWLP 125

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           + Y F  V++AC    ++  G  ++  +   G   S+V +  +++ M+ +    L+ A++
Sbjct: 126 DHYTFPFVLKACGEIPSLRHGASVHAIVCANG-LGSNVFICNSIVAMYGRCGA-LDDAHQ 183

Query: 239 VFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDM---ILSGFLPDRFTLSGVVSA 292
           +FD++ E+   + V W  ++    Q G  R A+R+   M         PD  TL  ++ A
Sbjct: 184 MFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITLVNILPA 243

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ +     GKQ+H +++R GL  DV VG +LV MYAKC+    ++++ KVF+ +   +V
Sbjct: 244 CASVFALQHGKQVHGFSVRNGLVDDVFVGNALVSMYAKCS---KMNEANKVFEGIKKKDV 300

Query: 353 MSWTAIITGYVQSGGRDK----------------------------------EAVKLFSD 378
           +SW A++TGY Q G  D                                   EA+ +F  
Sbjct: 301 VSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEALDVFRQ 360

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL-------DDCVGNSLIS 431
           M    + PN  T AS+L  C ++      +Q + + +K    L       D  V N LI 
Sbjct: 361 MQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVLNGLID 420

Query: 432 MYARSGRMEDARKAFESL--FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI--EDTGVGT 487
           MYA+      AR  F+S+   +KN+V++  M+  YA++  +  A +L  +I  + T +  
Sbjct: 421 MYAKCKSYRVARSIFDSIEGKDKNVVTWTVMIGGYAQHGEANDALKLFAQIFKQKTSLKP 480

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-IYNALISMYSRCANVEAAFQV 546
           +A+T +  L   + +G +  G Q+HA  +++  ES    + N LI MYS+  +++AA  V
Sbjct: 481 NAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKSGDIDAARAV 540

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  M+ RNV+SWTS++TG+  HG    AL +F +M   G   +GIT++ VL ACSH+G++
Sbjct: 541 FDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVLYACSHSGMV 600

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            +G  +F  M    GI    EHYACMVDLLGR+G L EA+E I++M +    +VW   L 
Sbjct: 601 DQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPTAVVWVALLS 660

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
           A R+H + ELG++AA  + E   ++  ++ LLSNLYA+A  W+ VA IR  MK   + K 
Sbjct: 661 ASRIHANIELGEYAASKLTELGAENDGSYTLLSNLYANARRWKDVARIRSLMKHTGIRKR 720

Query: 727 AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
            GCSWI+       F VG+ SHP++ +IY  L  L  +IK+ GY+P T+F LH++++E+K
Sbjct: 721 PGCSWIQGKKSTTTFFVGDRSHPESEQIYNLLLDLIKRIKDMGYVPQTSFALHDVDDEEK 780

Query: 787 VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
              LF+HSEK+AVA+G+++T+  +PIR+ KNLR+CGDCH+A+ YISM+   EIVLRDS+R
Sbjct: 781 GDLLFEHSEKLAVAYGILTTAPGQPIRIHKNLRICGDCHSALTYISMIIDHEIVLRDSSR 840

Query: 847 FHHIKDGKCSCNDYW 861
           FHH K G CSC  YW
Sbjct: 841 FHHFKKGSCSCRSYW 855



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 154/555 (27%), Positives = 274/555 (49%), Gaps = 60/555 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  PD  T+  +LK+C    +   G  VH+++  + L  N  I NS++++Y +CG 
Sbjct: 118 MQRLGWLPDHYTFPFVLKACGEIPSLRHGASVHAIVCANGLGSNVFICNSIVAMYGRCGA 177

Query: 129 LNEANKIFKSMGNKR--DIVSWSSMISSYVNRGKQVDAIHMFVEM---LELGFCPNEYCF 183
           L++A+++F  +  ++  DIVSW+S++++YV  G+   A+ +   M     L   P+    
Sbjct: 178 LDDAHQMFDEVLERKIEDIVSWNSILAAYVQGGQSRTALRIAFRMGNHYSLKLRPDAITL 237

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
             ++ AC++   +  G  ++GF ++ G  D DV VG AL+ M+ K S  +  A KVF+ +
Sbjct: 238 VNILPACASVFALQHGKQVHGFSVRNGLVD-DVFVGNALVSMYAKCS-KMNEANKVFEGI 295

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLF---------LDMI------------------- 275
            +K+ V W  M+T  +Q+G    A+ LF         LD+I                   
Sbjct: 296 KKKDVVSWNAMVTGYSQIGSFDSALSLFKMMQEEDIKLDVITWSAVIAGYAQKGHGFEAL 355

Query: 276 -------LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL-------DVCVG 321
                  L G  P+  TL+ ++S C+ +     GKQ H++ I+  L L       D+ V 
Sbjct: 356 DVFRQMQLYGLEPNVVTLASLLSGCASVGALLYGKQTHAYVIKNILNLNWNDKEDDLLVL 415

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRM--LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
             L+DMYAKC    S   +R +FD +   D NV++WT +I GY Q  G   +A+KLF+ +
Sbjct: 416 NGLIDMYAKCK---SYRVARSIFDSIEGKDKNVVTWTVMIGGYAQH-GEANDALKLFAQI 471

Query: 380 IQGQVA--PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARS 436
            + + +  PN FT +  L AC  L +  +  Q++ +A++     +   VGN LI MY++S
Sbjct: 472 FKQKTSLKPNAFTLSCALMACARLGELRLGRQLHAYALRNENESEVLYVGNCLIDMYSKS 531

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G ++ AR  F+++  +N+VS+ +++  Y  +   E+A  L  +++  G      TF  +L
Sbjct: 532 GDIDAARAVFDNMKLRNVVSWTSLMTGYGMHGRGEEALHLFDQMQKLGFAVDGITFLVVL 591

Query: 497 SGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRN 554
              S  G + +G      ++K  G       Y  ++ +  R   +  A ++ K M  +  
Sbjct: 592 YACSHSGMVDQGMIYFHDMVKGFGITPGAEHYACMVDLLGRAGRLNEAMELIKNMSMEPT 651

Query: 555 VISWTSMITGFAKHG 569
            + W ++++    H 
Sbjct: 652 AVVWVALLSASRIHA 666


>gi|259490042|ref|NP_001159140.1| hypothetical protein [Zea mays]
 gi|223942207|gb|ACN25187.1| unknown [Zea mays]
 gi|414585730|tpg|DAA36301.1| TPA: hypothetical protein ZEAMMB73_369042 [Zea mays]
          Length = 885

 Score =  505 bits (1301), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 290/826 (35%), Positives = 448/826 (54%), Gaps = 88/826 (10%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           LL      PN +  N +++ Y+K G L++A ++F  M   RD+ SW++++S Y    + +
Sbjct: 81  LLLMDIAHPNVITHNVMLNGYAKLGRLSDAVELFGRM-PARDVASWNTLMSGYFQSRQYL 139

Query: 163 DAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIG--HIIYGFLLKCGYFDS--DVC 217
            ++  F+ M   G   PN +  +  +++C      A+G   +    L     FDS  D  
Sbjct: 140 VSLETFLSMHRSGDSWPNAFTLACAMKSCG-----ALGWHSLALQLLAMVQKFDSQDDSE 194

Query: 218 VGCALIDMFVK-GSVDLES-----------------------------AYKVFDKMTEKN 247
           V  AL+DMFV+ G+VDL S                             A ++FD M E++
Sbjct: 195 VAAALVDMFVRCGAVDLASRLFVRIKEPTMFCRNSMLAGYVKTYGVDHALELFDSMPERD 254

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W +M++  +Q G  R+A+ + +DM   G   D  T +  ++AC+ L     GKQLH+
Sbjct: 255 VVSWNMMVSALSQSGRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHA 314

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             IR    +D  V  +LV++YAK    G   +++ VF+ + D N ++WT +I+G++Q G 
Sbjct: 315 QVIRNLPHIDPYVASALVELYAK---SGCFKEAKGVFNSLHDRNNVAWTVLISGFLQYGC 371

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
              E+V+LF+ M    +  + F  A+++  C + +D  +  Q+++  +K G+     V N
Sbjct: 372 F-TESVELFNQMRAELMTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSN 430

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           SLISMYA+   ++ A   F  + EK++VS+ +M+ AY++  N  KA E    + +  V T
Sbjct: 431 SLISMYAKCDNLQSAEAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVIT 490

Query: 488 -----SAY---------------------------TFASLLSGASSIGAIGKGEQIHARI 515
                 AY                           T+ +L  G + +GA   G+QI  R 
Sbjct: 491 WNAMLGAYIQHGAEEDGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRT 550

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           +K G   +  + NA+I+MYS+C  +  A +VF  +  ++++SW +MITG+++HG   +A+
Sbjct: 551 VKVGLIIDTSVANAVITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAI 610

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           EIF  +L  G KP+ I+Y+AVLS CSH+GL+ EG  +F  M   H I   +EH++CMVDL
Sbjct: 611 EIFDDILKRGAKPDYISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDL 670

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           LGR+G LTEA + I  MP+     VW   L AC++HG+ EL + AA+ + E D  D  ++
Sbjct: 671 LGRAGHLTEAKDLIDDMPMKPTAEVWGALLSACKIHGNNELAELAAKHVFELDSPDSGSY 730

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           +L++ +YA AG  +  A IRK M+++ + K  G SW+E DNKVH F   + SHP+ L I 
Sbjct: 731 MLMAKIYADAGKSDDSAQIRKLMRDKGIKKNPGYSWMEVDNKVHVFKADDVSHPQVLAIR 790

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVF 815
            +LD+L  KI   GY+                +    HSEK+AVAFGL++     PI + 
Sbjct: 791 KKLDELMEKIARLGYV-----------RTDSTRSEIHHSEKLAVAFGLMTLPTWMPIHIM 839

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KNLR+CGDCHT IK IS VTGRE V+RD+ RFHH   G CSC DYW
Sbjct: 840 KNLRICGDCHTVIKLISTVTGREFVIRDAVRFHHFNGGSCSCGDYW 885



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/559 (25%), Positives = 275/559 (49%), Gaps = 46/559 (8%)

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
           L   L  R K EP     NS+++ Y K   ++ A ++F SM  +RD+VSW+ M+S+    
Sbjct: 211 LASRLFVRIK-EPTMFCRNSMLAGYVKTYGVDHALELFDSM-PERDVVSWNMMVSALSQS 268

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G+  +A+ M V+M   G   +   +++ + AC+   ++  G  ++  +++      D  V
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIR-NLPHIDPYV 327

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             AL++++ K     + A  VF+ + ++N V WT++I+   Q GC  +++ LF  M    
Sbjct: 328 ASALVELYAKSGC-FKEAKGVFNSLHDRNNVAWTVLISGFLQYGCFTESVELFNQMRAEL 386

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC------- 331
              D+F L+ ++S C        G+QLHS  +++G    V V  SL+ MYAKC       
Sbjct: 387 MTLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQAVVVSNSLISMYAKCDNLQSAE 446

Query: 332 ---------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
                                +  G+V  +R+ FD M + NV++W A++  Y+Q G  ++
Sbjct: 447 AIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGA-EE 505

Query: 371 EAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           + ++++  M+  + V P+  T+ ++ K C +L  + + +Q+    VK G  +D  V N++
Sbjct: 506 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 565

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I+MY++ GR+ +ARK F+ L  K++VS+N M+  Y+++   ++A E+  +I   G     
Sbjct: 566 ITMYSKCGRILEARKVFDFLNVKDIVSWNAMITGYSQHGMGKQAIEIFDDILKRGAKPDY 625

Query: 490 YTFASLLSGASSIGAIGKGE-----QIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
            ++ ++LSG S  G + +G+        A  I  G E   C    ++ +  R  ++  A 
Sbjct: 626 ISYVAVLSGCSHSGLVQEGKFYFDMMKRAHNISPGLEHFSC----MVDLLGRAGHLTEAK 681

Query: 545 QVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +  +M  +     W ++++    HG    A E+  K + +   P+  +Y+ +    + A
Sbjct: 682 DLIDDMPMKPTAEVWGALLSACKIHGNNELA-ELAAKHVFELDSPDSGSYMLMAKIYADA 740

Query: 604 GLISEGWKHFRSMYDEHGI 622
           G  S+     R +  + GI
Sbjct: 741 GK-SDDSAQIRKLMRDKGI 758



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/429 (25%), Positives = 214/429 (49%), Gaps = 46/429 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GRV++A+  +  M  KG   D  TY+  L +C R  +   GK +H+ + R+    +  + 
Sbjct: 269 GRVREALDMVVDMQSKGVRLDSTTYTSSLTACARLSSLRWGKQLHAQVIRNLPHIDPYVA 328

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++L+ LY+K G   EA  +F S+ + R+ V+W+ +IS ++  G   +++ +F +M     
Sbjct: 329 SALVELYAKSGCFKEAKGVFNSL-HDRNNVAWTVLISGFLQYGCFTESVELFNQMRAELM 387

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +++  + +I  C +  ++ +G  ++   LK G   + V V  +LI M+ K   +L+SA
Sbjct: 388 TLDQFALATLISGCCSRMDLCLGRQLHSLCLKSGQIQA-VVVSNSLISMYAKCD-NLQSA 445

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQL-------------------------------GCPR 265
             +F  M EK+ V WT MIT  +Q+                               G   
Sbjct: 446 EAIFRFMNEKDIVSWTSMITAYSQVGNVAKAREFFDGMSEKNVITWNAMLGAYIQHGAEE 505

Query: 266 DAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           D +R++  M+   ++ PD  T   +   C++L     G Q+    ++ GL +D  V  ++
Sbjct: 506 DGLRMYKVMLSEEYVRPDWVTYVTLFKGCADLGANKLGDQIIGRTVKVGLIIDTSVANAV 565

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           + MY+KC   G + ++RKVFD +   +++SW A+ITGY Q  G  K+A+++F D+++   
Sbjct: 566 ITMYSKC---GRILEARKVFDFLNVKDIVSWNAMITGYSQH-GMGKQAIEIFDDILKRGA 621

Query: 385 APNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRALDDCVG--NSLISMYARSGRME 440
            P++ ++ +VL  C +   S + ++   Y   +KR   +   +   + ++ +  R+G + 
Sbjct: 622 KPDYISYVAVLSGCSH---SGLVQEGKFYFDMMKRAHNISPGLEHFSCMVDLLGRAGHLT 678

Query: 441 DARKAFESL 449
           +A+   + +
Sbjct: 679 EAKDLIDDM 687


>gi|359489786|ref|XP_002271725.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Vitis vinifera]
          Length = 852

 Score =  505 bits (1300), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 296/837 (35%), Positives = 461/837 (55%), Gaps = 68/837 (8%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           D  S L   C   ++    +L+H  L    L  +      +IS+Y       +A  + + 
Sbjct: 30  DLTSTLFHQC---KSLASAELIHQQLLVQGLPHDP---THIISMYLTFNSPAKALSVLRR 83

Query: 139 M-GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
           +  +   +  W+ +I   V+ G   D + ++  M  LG+ P+ Y F  V++AC    +  
Sbjct: 84  LHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWRPDHYTFPFVLKACGEIPSFR 143

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK---NTVGWTLM 254
            G  ++  +   G F+ +V VG  L+ M+ +     E+A +VFD+M E+   + V W  +
Sbjct: 144 CGASVHAVVFASG-FEWNVFVGNGLVSMYGRCGA-WENARQVFDEMRERGVGDLVSWNSI 201

Query: 255 ITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           +    Q G    A+++F  M    G  PD  +L  V+ AC+ +  ++ GKQ+H +A+R+G
Sbjct: 202 VAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPACASVGAWSRGKQVHGYALRSG 261

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK--- 370
           L  DV VG ++VDMYAKC   G ++++ KVF+RM   +V+SW A++TGY Q G  D    
Sbjct: 262 LFEDVFVGNAVVDMYAKC---GMMEEANKVFERMKVKDVVSWNAMVTGYSQIGRFDDALG 318

Query: 371 -------------------------------EAVKLFSDMIQGQVAPNHFTFASVLKAC- 398
                                          EA+ +F  M      PN  T  S+L  C 
Sbjct: 319 LFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQMRLCGSEPNVVTLVSLLSGCA 378

Query: 399 --GNLLDSNVAEQVYTHAVKRGRALDD-------CVGNSLISMYARSGRMEDARKAFESL 449
             G LL     ++ + HA+K    LD+        V N+LI MY++    + AR  F+ +
Sbjct: 379 LAGTLLH---GKETHCHAIKWILNLDENDPGDDLMVINALIDMYSKCKSPKAARAMFDLI 435

Query: 450 FEKN--LVSYNTMVDAYAKNLNSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAI 505
             K+  +V++  ++   A++  + +A EL  ++   D  V  +A+T +  L   + +GA+
Sbjct: 436 PPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGAL 495

Query: 506 GKGEQIHARIIKSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
             G QIHA ++++ FES    + N LI MYS+  +V+AA  VF  M  RN +SWTS++TG
Sbjct: 496 RFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAARVVFDNMHQRNGVSWTSLMTG 555

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +  HG    AL+IFY+M   G+ P+G+T++ VL ACSH+G++ +G  +F  M  + G+V 
Sbjct: 556 YGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNKDFGVVP 615

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
             EHYACMVDLL R+G L EA+E IR MP+     VW   L ACRV+ + ELG++AA  +
Sbjct: 616 GAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVALLSACRVYANVELGEYAANQL 675

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
           LE +  +  ++ LLSN+YA+A  W+ VA IR  MK   + K  GCSW++       F  G
Sbjct: 676 LELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIKKRPGCSWVQGRKGTATFFAG 735

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           + SHP + +IY  L  L  +IK  GY+PD  F LH++++E+K   L +HSEK+A+A+G++
Sbjct: 736 DWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDEEKGDLLSEHSEKLALAYGIL 795

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T+   PIR+ KNLR CGDCH+A  YIS++   EI++RDS+RFHH K+G CSC  YW
Sbjct: 796 TTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDSSRFHHFKNGSCSCRGYW 852



 Score =  225 bits (574), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 160/547 (29%), Positives = 272/547 (49%), Gaps = 58/547 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  PD  T+  +LK+C    +F  G  VH+++  S  E N  + N L+S+Y +CG 
Sbjct: 117 MQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGA 176

Query: 129 LNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSA 185
              A ++F  M  +   D+VSW+S++++Y+  G  + A+ MF  M E LG  P+      
Sbjct: 177 WENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVN 236

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+ AC++    + G  ++G+ L+ G F+ DV VG A++DM+ K  + +E A KVF++M  
Sbjct: 237 VLPACASVGAWSRGKQVHGYALRSGLFE-DVFVGNAVVDMYAKCGM-MEEANKVFERMKV 294

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLF-------------------------------LD- 273
           K+ V W  M+T  +Q+G   DA+ LF                               LD 
Sbjct: 295 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 354

Query: 274 ---MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL-------DVCVGCS 323
              M L G  P+  TL  ++S C+       GK+ H  AI+  L L       D+ V  +
Sbjct: 355 FRQMRLCGSEPNVVTLVSLLSGCALAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 414

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRM--LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
           L+DMY+KC    S   +R +FD +   D +V++WT +I G  Q  G   EA++LFS M+Q
Sbjct: 415 LIDMYSKCK---SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH-GEANEALELFSQMLQ 470

Query: 382 GQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALDDCVGNSLISMYARSGR 438
               V PN FT +  L AC  L       Q++ + ++ R  +    V N LI MY++SG 
Sbjct: 471 PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGD 530

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ++ AR  F+++ ++N VS+ +++  Y  +   E+A ++ +E++  G+     TF  +L  
Sbjct: 531 VDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVGLVPDGVTFVVVLYA 590

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
            S  G + +G      + K  G       Y  ++ + SR   ++ A ++ + M  +   +
Sbjct: 591 CSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPA 650

Query: 558 -WTSMIT 563
            W ++++
Sbjct: 651 VWVALLS 657



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 104/210 (49%), Gaps = 14/210 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNH--PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           G   +A+     M Q  N   P+  T S  L +C R      G+ +H+ + R++ E   +
Sbjct: 456 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 515

Query: 115 -ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + N LI +YSK GD++ A  +F +M ++R+ VSW+S+++ Y   G+  +A+ +F EM +
Sbjct: 516 FVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 574

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG----CALIDMFVKG 229
           +G  P+   F  V+ ACS++  V  G   +  + K    D  V  G      ++D+  + 
Sbjct: 575 VGLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNK----DFGVVPGAEHYACMVDLLSRA 630

Query: 230 SVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
              L+ A ++   M  K T   W  +++ C
Sbjct: 631 G-RLDEAMELIRGMPMKPTPAVWVALLSAC 659


>gi|15128441|dbj|BAB62625.1| P0402A09.8 [Oryza sativa Japonica Group]
 gi|20804430|dbj|BAB92127.1| P0455C04.2 [Oryza sativa Japonica Group]
          Length = 1122

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/806 (33%), Positives = 456/806 (56%), Gaps = 26/806 (3%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           D R+ K  F  D++T + N        L L+S + S + H  + +   +       N   
Sbjct: 31  DARMVKTGF--DVLTYRLN--------LGLRSLLSSGHLHRARAMFDQMPHK----NIFS 76

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
           LN ++S YS  GDL  A  +F S    R+  +W+ M+ ++   G+  DA+ +F  ML  G
Sbjct: 77  LNLILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEG 135

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+    + V+    N     +  + + F +K G  D+ V V   L+D + K  + L +
Sbjct: 136 VIPDRVTVTTVL----NLPGCTVPSL-HPFAIKFG-LDTHVFVCNTLLDAYCKHGL-LAA 188

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VF +M +K+ V +  M+  C++ G    A++LF  M  +G     FT S +++  + 
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           +     G Q+H+  +R+   L+V V  SL+D Y+KC     +DD R++FD M + + +S+
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC---LDDMRRLFDEMPERDNVSY 305

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
             II  Y  +       ++LF +M +         +A++L   G+L D ++ +Q++   V
Sbjct: 306 NVIIAAYAWNQCA-ATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 364

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
             G A +D +GN+LI MY++ G ++ A+  F +  EK+ +S+  ++  Y +N   E+A +
Sbjct: 365 LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQ 424

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  ++   G+     TF+S++  +SS+  IG G Q+H+ +I+SG++S+    + L+ MY+
Sbjct: 425 LFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYA 484

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  ++ A + F EM +RN ISW ++I+ +A +G A  A+++F  ML  G  P+ +T+++
Sbjct: 485 KCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLS 544

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VL+ACSH GL  E  K+F  M  ++ I    EHYAC++D LGR G  ++  + +  MP  
Sbjct: 545 VLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFK 604

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           AD ++W + L +CR+HG+ EL + AA+ +   +P D   +++LSN+YA AG WE  A ++
Sbjct: 605 ADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVK 664

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K M++R + KE+G SW+E   K++ F   + + P   EI  ELD+L  ++ + GY PD  
Sbjct: 665 KIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDIT 724

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
             LH ++ E K++ L  HSE++A+AF L++T    PIR+ KNL  C DCH  IK IS + 
Sbjct: 725 CALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIV 784

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            R+I++RDS RFHH KDG CSC DYW
Sbjct: 785 NRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 1/140 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G+ ++A+     M + G  PD  T+S ++K+        LG+ +HS L RS  + +
Sbjct: 413 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 472

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               + L+ +Y+KCG L+EA + F  M  +R+ +SW+++IS+Y + G+  +AI MF  ML
Sbjct: 473 VFSGSVLVDMYAKCGCLDEALRTFDEM-PERNSISWNAVISAYAHYGEAKNAIKMFEGML 531

Query: 173 ELGFCPNEYCFSAVIRACSN 192
             GF P+   F +V+ ACS+
Sbjct: 532 HCGFNPDSVTFLSVLAACSH 551


>gi|359482660|ref|XP_002285225.2| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Vitis vinifera]
          Length = 872

 Score =  504 bits (1299), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 299/870 (34%), Positives = 485/870 (55%), Gaps = 22/870 (2%)

Query: 2   MTLSLPAP----AKIPPPSSFKPSNPSRQ-NLPPSSSPPFIAQPTTSEPLSNRLIYHLN- 55
           +  +LP P       P P +F  +  +RQ +L        +   + +    N LI  L  
Sbjct: 12  LQTNLPNPHHSKTHKPKPLNFSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLILELCL 71

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
            G ++KA+  LD M +     + +TY  LL+ C   R    G  VHS ++++       +
Sbjct: 72  KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRL 131

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+S++ + GDL EA  +F  M  +RD+ SW+ ++  Y   G   +A++++  ML +G
Sbjct: 132 GNALLSMFVRFGDLVEAWYVFGKMA-ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+ Y F  V+R C    ++A G  ++  +++ G F+SDV V  ALI M+VK   D+ S
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG-FESDVDVVNALITMYVKCG-DIFS 248

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD+M  ++ + W  MI+   +     + +RLF  M      PD  T++ V+SAC  
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     G+++H + I+TG   +V V  SL+ M++     G  D++  VF +M   +++SW
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV---GCWDEAEMVFSKMEFKDLVSW 365

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL--LDSNVAEQVYTH 413
           TA+I+GY ++G  +K AV+ ++ M    V P+  T ASVL AC  L  LD  +   ++  
Sbjct: 366 TAMISGYEKNGLPEK-AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI--MLHEF 422

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           A + G      V NSLI MY++   ++ A + F  +  KN++S+ +++     N  S +A
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA 482

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
                ++    +  ++ T  S+LS  + IGA+  G++IHA  +++G   +  + NAL+ M
Sbjct: 483 LFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDM 541

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y RC  +E A+  F   E ++V SW  ++TG+A+ G    A+E+F+KM+   + P+ IT+
Sbjct: 542 YVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            ++L ACS +G++++G ++F SM  +  I   ++HYA +VDLLGR+G L +A EFI+ MP
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           +  D  +W   L ACR++ + ELG+ AA+ I E D +    +ILL NLYA +G W+ VA 
Sbjct: 661 IDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVAR 720

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +RK M+E  L  + GCSW+E   +VH F  G+  HP+  EI A L+    K++  G    
Sbjct: 721 VRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMS 780

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +    ++ +  K +    HSE++A+AFGLI+T    PI V KNL +C +CH  +K+IS 
Sbjct: 781 KDSRRDDI-DASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISK 839

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCND--YW 861
           V  R I +RD+ +FHH KDG CSC D  YW
Sbjct: 840 VVRRGISVRDTEQFHHFKDGVCSCGDEGYW 869


>gi|302786876|ref|XP_002975209.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
 gi|300157368|gb|EFJ23994.1| hypothetical protein SELMODRAFT_102435 [Selaginella moellendorffii]
          Length = 805

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 293/775 (37%), Positives = 438/775 (56%), Gaps = 24/775 (3%)

Query: 97  GKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           GKL+HS ++ S+    +  + +SL+ +Y +CG L  A  +F  + +K  IV W+ +IS+Y
Sbjct: 45  GKLLHSKISSSQSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHK-SIVLWTVLISAY 103

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           V+RG    AI +F  +L+ G   +   F +V+ ACS+ E +A G +I+   ++ G    +
Sbjct: 104 VSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQE 163

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLD 273
           + V  AL+ M+ + GS  L  A  +F  +    + V W  MIT  +Q G PR+A+ +F  
Sbjct: 164 I-VASALVSMYGRCGS--LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYR 220

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSG--KQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           M+  G  PD  T   V  ACS      +   K  H+    TGL  DV V  +LV+ YA+C
Sbjct: 221 MLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHTCLDETGLGSDVVVATALVNAYARC 280

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +D +R+ F  M + N +SWT++I  + Q G     AV+ F  M+   V P   T 
Sbjct: 281 ---GEIDCAREFFAAMPERNAVSWTSMIAAFAQIG--HLLAVETFHAMLLEGVVPTRSTL 335

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF----E 447
            + L+ C +L  + + E +   A + G A D  +   L+  YAR    EDA + F    E
Sbjct: 336 FAALEGCEDLHTARLVEAI---AQEIGVATDVAIVTDLVMAYARCDGQEDAIRVFSAREE 392

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
             ++  LV+   M+  YA+  +    F+L     + G+      + + L   +S+ A+ +
Sbjct: 393 GEWDAALVT--AMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSE 450

Query: 508 GEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           G QIHA +      + +  + NA++SMY +C ++  A   F  M  R+ ISW +M++  A
Sbjct: 451 GRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASA 510

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           +HG      ++F  ML +G     + ++ +LSAC+HAGL+  G +HF +M  +HG+V   
Sbjct: 511 QHGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPAT 570

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHY CMVDLLGR G L +A   +++MP+  D   W   +GACR++GDTE G+ AAE +LE
Sbjct: 571 EHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLE 630

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
                 AA++ L N+Y++AG WE  A +RK M +  L K  G S IE  +KVH+F V + 
Sbjct: 631 LRANHTAAYVALCNIYSAAGRWEDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDR 690

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           SHP++  IYAEL+++   I+  GY   T  VLH++EEEQK Q L  HSEK+A+AFG++ST
Sbjct: 691 SHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMST 750

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +   +RV KNLRVC DCH A K+IS V GREIV+RD  RFHH KDG CSC DYW
Sbjct: 751 PQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  190 bits (482), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 256/540 (47%), Gaps = 26/540 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G    AI     + Q+G   D   +  +L +C        G+L+H     + L   
Sbjct: 103 YVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQ 162

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ ++L+S+Y +CG L +AN +F  +    D+V W++MI++    G   +A+ +F  ML
Sbjct: 163 EIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRML 222

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF--LLKCGYFDSDVCVGCALIDMFVKGS 230
           +LG  P+   F +V +ACS++ ++     + GF   L      SDV V  AL++ + +  
Sbjct: 223 QLGIPPDLVTFVSVFKACSSSPSLRASQ-VKGFHTCLDETGLGSDVVVATALVNAYARCG 281

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
            +++ A + F  M E+N V WT MI    Q+G    A+  F  M+L G +P R TL   +
Sbjct: 282 -EIDCAREFFAAMPERNAVSWTSMIAAFAQIG-HLLAVETFHAMLLEGVVPTRSTLFAAL 339

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
             C +L    + + + + A   G+A DV +   LV  YA+C  DG  +D+ +VF    + 
Sbjct: 340 EGCEDLH---TARLVEAIAQEIGVATDVAIVTDLVMAYARC--DGQ-EDAIRVFSAREEG 393

Query: 351 --NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +    TA+I  Y Q   R +   KL+   I+  ++P+   + + L AC +L   +   
Sbjct: 394 EWDAALVTAMIAVYAQCRDR-RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGR 452

Query: 409 QVYTHAVKRGRALDDCV--GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           Q++   V   R LD  V  GN+++SMY + G + DAR AF+ +  ++ +S+N M+ A A+
Sbjct: 453 QIHA-CVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQ 511

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHC 525
           +   E   +L   +   G       F +LLS  +  G +  G E   A     G      
Sbjct: 512 HGRVEDCCDLFRAMLQEGFDAERVAFLNLLSACAHAGLVEAGCEHFSAMTGDHGVVPATE 571

Query: 526 IYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG------FAA-RALEI 577
            Y  ++ +  R   +  A  + + M    +  +W +++     +G      FAA R LE+
Sbjct: 572 HYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLEL 631


>gi|357165485|ref|XP_003580399.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 886

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 286/825 (34%), Positives = 446/825 (54%), Gaps = 84/825 (10%)

Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQ 161
           +LL     EPN +  N +++ Y+K G L++A ++F  M   RD+ SW++++S Y   G+ 
Sbjct: 81  NLLRDEITEPNVITHNIMMNGYAKLGSLSDAVELFGRMPT-RDVASWNTIMSGYYQSGQF 139

Query: 162 VDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS--DVCV 218
           ++A+ +FV M + G   PN + F  V+++C       +   + G L K   FDS  D  V
Sbjct: 140 LNALDIFVSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSK---FDSQDDPDV 196

Query: 219 GCALIDMFVK-GSVDLES-----------------------------AYKVFDKMTEKNT 248
             AL+DM V+ G++D  S                             A ++F  M E++ 
Sbjct: 197 QTALVDMLVRCGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDV 256

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W ++I+  ++ G  R+A+ + +DM   G  PD  T +  ++AC+ L     GKQLH  
Sbjct: 257 VSWNMVISALSKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQ 316

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            IR    +D  V  ++V++YAKC   G   ++++VF  + D N +SWT +I G++Q G  
Sbjct: 317 VIRNLPHIDPYVASAMVELYAKC---GCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCF 373

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
             E+V+LF+ M    +A + F  A+++  C N +D  +  Q+++  +K G      V NS
Sbjct: 374 -SESVELFNQMRAELMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNS 432

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT- 487
           LISMYA+ G +++A   F  + E+++VS+  M+ AY++  N  KA E   ++    V T 
Sbjct: 433 LISMYAKCGNLQNAELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITW 492

Query: 488 ----SAY---------------------------TFASLLSGASSIGAIGKGEQIHARII 516
                AY                           T+ +L  G + IGA   G+QI    +
Sbjct: 493 NAMLGAYIQHGAEEDGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTV 552

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K G   +  + NA+I+MYS+C  +  A + F  +  ++++SW +MITG+++HG   +A+E
Sbjct: 553 KVGLILDTSVVNAVITMYSKCGRISEARKAFDFLSRKDLVSWNAMITGYSQHGMGKQAIE 612

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           IF  +L  G KP+ I+Y+AVLS CSH+GL+ EG  +F  M  +H I   +EH++CMVDLL
Sbjct: 613 IFDDILNKGAKPDYISYVAVLSGCSHSGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLL 672

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GR+G L EA   I  MP+     VW   L AC+ HG+ +L + AA+ + + D      ++
Sbjct: 673 GRAGHLIEAKNLIDEMPMKPTAEVWGALLSACKTHGNNDLAELAAKHLFDLDSPGSGGYM 732

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LL+ +YA AG  +  A +RK M+++ + K  G SW+E +N+VH F   + SHP+ + I  
Sbjct: 733 LLAKMYADAGKSDDSAQVRKLMRDKGIKKSPGYSWMEVNNRVHVFKAEDVSHPQVIAIRE 792

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
           +LD+L  KI   GY+             +  +    HSEK+AVAFG++S     PI + K
Sbjct: 793 KLDELMEKIAHLGYV-----------RTESPRSEIHHSEKLAVAFGIMSLPAWMPIHIMK 841

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLR+C DCHT IK IS VT RE V+RD  RFHH K G CSC DYW
Sbjct: 842 NLRICDDCHTVIKLISTVTDREFVIRDGVRFHHFKGGSCSCMDYW 886



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 215/429 (50%), Gaps = 46/429 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GRV++A+  +  M  KG  PD  TY+  L +C R  +   GK +H  + R+    +  + 
Sbjct: 270 GRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDPYVA 329

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++++ LY+KCG   EA ++F S+   R+ VSW+ +I  ++  G   +++ +F +M     
Sbjct: 330 SAMVELYAKCGCFKEAKRVFSSL-RDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAELM 388

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +++  + +I  C NT ++ +G  ++   LK G+  + V V  +LI M+ K   +L++A
Sbjct: 389 AVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRA-VVVSNSLISMYAKCG-NLQNA 446

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQL-------------------------------GCPR 265
             +F+ M E++ V WT MIT  +Q+                               G   
Sbjct: 447 ELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMSTRNVITWNAMLGAYIQHGAEE 506

Query: 266 DAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           D ++++ DM+     +PD  T   +   C+++     G Q+    ++ GL LD  V  ++
Sbjct: 507 DGLKMYSDMLTEKDVIPDWVTYVTLFRGCADIGANKLGDQIIGHTVKVGLILDTSVVNAV 566

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           + MY+KC   G + ++RK FD +   +++SW A+ITGY Q  G  K+A+++F D++    
Sbjct: 567 ITMYSKC---GRISEARKAFDFLSRKDLVSWNAMITGYSQH-GMGKQAIEIFDDILNKGA 622

Query: 385 APNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRALDDCVG--NSLISMYARSGRME 440
            P++ ++ +VL  C +   S + E+   Y   +KR   +   +   + ++ +  R+G + 
Sbjct: 623 KPDYISYVAVLSGCSH---SGLVEEGKFYFDMMKRDHNISPGLEHFSCMVDLLGRAGHLI 679

Query: 441 DARKAFESL 449
           +A+   + +
Sbjct: 680 EAKNLIDEM 688



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/495 (25%), Positives = 220/495 (44%), Gaps = 94/495 (18%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV------------ 333
           L+  + +C      T  + LHS  I  GLA  V +  +L+  Y  C              
Sbjct: 28  LADALRSCGARSALTGARTLHSRLINVGLASVVFLQNTLLHAYLSCGALSDARNLLRDEI 87

Query: 334 -----------------DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
                             GS+ D+ ++F RM   +V SW  I++GY QS G+   A+ +F
Sbjct: 88  TEPNVITHNIMMNGYAKLGSLSDAVELFGRMPTRDVASWNTIMSGYYQS-GQFLNALDIF 146

Query: 377 SDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
             M Q G   PN FTF  V+K+CG L    VA Q+     K     D  V  +L+ M  R
Sbjct: 147 VSMRQTGDSLPNAFTFGCVMKSCGALGWHEVALQLLGLLSKFDSQDDPDVQTALVDMLVR 206

Query: 436 SGRMEDARKA-------------------------------FESLFEKNLVSYNTMVDAY 464
            G M+ A K                                F+S+ E+++VS+N ++ A 
Sbjct: 207 CGAMDFASKQFSRIKNPTIICRNSMLVGYAKSHGVDHALEIFKSMPERDVVSWNMVISAL 266

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           +K+    +A +++ ++   GV   + T+ S L+  + + ++  G+Q+H ++I++    + 
Sbjct: 267 SKSGRVREALDMVVDMHGKGVRPDSTTYTSSLTACARLSSLEWGKQLHVQVIRNLPHIDP 326

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + +A++ +Y++C   + A +VF  + DRN +SWT +I GF ++G  + ++E+F +M A+
Sbjct: 327 YVASAMVELYAKCGCFKEAKRVFSSLRDRNSVSWTVLIGGFLQYGCFSESVELFNQMRAE 386

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWK---------HFR---------SMYDEHGIVQRM 626
            +  +      ++S C +   I  G +         H R         SMY + G +Q  
Sbjct: 387 LMAVDQFALATLISGCCNTMDICLGSQLHSLCLKSGHTRAVVVSNSLISMYAKCGNLQNA 446

Query: 627 E------------HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           E             +  M+    + G++ +A EF   M  + +V+ W   LGA   HG  
Sbjct: 447 ELIFNFMAERDIVSWTGMITAYSQVGNIAKAREFFDDMS-TRNVITWNAMLGAYIQHGAE 505

Query: 675 ELG-KHAAEMILEQD 688
           E G K  ++M+ E+D
Sbjct: 506 EDGLKMYSDMLTEKD 520


>gi|296089484|emb|CBI39303.3| unnamed protein product [Vitis vinifera]
          Length = 723

 Score =  504 bits (1298), Expect = e-140,   Method: Compositional matrix adjust.
 Identities = 272/730 (37%), Positives = 420/730 (57%), Gaps = 19/730 (2%)

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           KR++VSW+S+IS Y   G   + +++F E        +++ FS  +  C  T ++ +G +
Sbjct: 3   KRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLGRL 62

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           I+  +   G     V +  +LIDM+ K G +D   A  VF+   E ++V W  +I    +
Sbjct: 63  IHALITVSG-LGGPVLLTNSLIDMYCKCGRIDW--ARLVFESADELDSVSWNSLIAGYVR 119

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS----GKQLHSWAIRTGLAL 316
           +G   + +RL + M+  G   + + L   + AC     F+S    GK LH  A++ GL L
Sbjct: 120 IGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSN--FSSSIECGKMLHGCAVKLGLDL 177

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ----SGGRDKEA 372
           DV VG +L+D YAK    G ++D+ K+F  M D NV+ + A+I G++Q    +     EA
Sbjct: 178 DVVVGTALLDTYAKI---GDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEA 234

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           + LF +M    + P+ FTF+S+LKAC  +      +Q++    K     D+ +GN+L+ +
Sbjct: 235 MYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVEL 294

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y+ SG +ED  K F S  + ++VS+ +++  + +N   E    L HE+  +G     +T 
Sbjct: 295 YSLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTI 354

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           + +LS  +++ A+  GEQIHA  IK+G  +   I N+ I MY++C ++++A   FKE ++
Sbjct: 355 SIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICMYAKCGDIDSANMTFKETKN 414

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            +++SW+ MI+  A+HG A  A+++F  M   GI PN IT++ VL ACSH GL+ EG ++
Sbjct: 415 PDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVACSHGGLVEEGLRY 474

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F  M  +HGI   ++H AC+VDLLGR+G L EA  FI       D ++WR+ L ACRVH 
Sbjct: 475 FEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSGFEGDPVMWRSLLSACRVHK 534

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
            T+ GK  AE ++E +P+  A+++LL N+Y  AG       IR  MK+R + KE G SWI
Sbjct: 535 ATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATEIRNLMKDRGVKKEPGLSWI 594

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E  N VH F  G+ SHP +  IY +L+++  +IK+  Y+ D   V    E + K   +  
Sbjct: 595 EVGNVVHSFVAGDRSHPNSQVIYVQLEEMLEEIKKLDYI-DEKLVSDASEPKHKDNSMVS 653

Query: 793 -HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSEK+AV FG+IS  +S P+RV KNLR C  CH  +K  S +  REI+LRD  RFH  +
Sbjct: 654 YHSEKLAVTFGIISLPRSAPVRVMKNLRSCWHCHETMKLFSRLENREIILRDPIRFHRFR 713

Query: 852 DGKCSCNDYW 861
           DG CSC DYW
Sbjct: 714 DGSCSCGDYW 723



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 163/561 (29%), Positives = 282/561 (50%), Gaps = 51/561 (9%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S  L  C R+ +  LG+L+H+L+T S L    ++ NSLI +Y KCG ++ A  +F+S 
Sbjct: 43  TFSNALSVCGRTLDLRLGRLIHALITVSGLGGPVLLTNSLIDMYCKCGRIDWARLVFES- 101

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN--TENVA 197
            ++ D VSW+S+I+ YV  G   + + + V+ML  G   N Y   + ++AC +  + ++ 
Sbjct: 102 ADELDSVSWNSLIAGYVRIGSNDEMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIE 161

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G +++G  +K G  D DV VG AL+D + K   DLE A K+F  M + N V +  MI  
Sbjct: 162 CGKMLHGCAVKLG-LDLDVVVGTALLDTYAKIG-DLEDATKIFKLMPDPNVVMYNAMIAG 219

Query: 258 CTQLGCPRD-----AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
             Q+    D     A+ LF +M   G  P  FT S ++ ACS +E F  GKQ+H+   + 
Sbjct: 220 FLQMETMADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKY 279

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            L  D  +G +LV++Y   ++ GS++D  K F      +V+SWT++I G+VQ+ G+ +  
Sbjct: 280 NLQSDEFIGNALVELY---SLSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQN-GQFEGG 335

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           + LF +++     P+ FT + +L AC NL      EQ++ +A+K G      + NS I M
Sbjct: 336 LTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTIIQNSQICM 395

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+ G ++ A   F+     ++VS++ M+ + A++  +++A +L   ++ +G+  +  TF
Sbjct: 396 YAKCGDIDSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITF 455

Query: 493 ASLLSGASS---------------------------------IGAIGKGEQIHARIIKSG 519
             +L   S                                  +G  G+  +  + I+ SG
Sbjct: 456 LGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRAGRLAEAESFIMDSG 515

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFK---EMEDRNVISWTSMITGFAKHGFAARALE 576
           FE +  ++ +L+S        +   +V +   E+E     S+  +   +   G    A E
Sbjct: 516 FEGDPVMWRSLLSACRVHKATDTGKRVAERVIELEPEAAASYVLLYNIYNDAGIQMPATE 575

Query: 577 IFYKMLADGIKPN-GITYIAV 596
           I   M   G+K   G+++I V
Sbjct: 576 IRNLMKDRGVKKEPGLSWIEV 596



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 123/374 (32%), Positives = 205/374 (54%), Gaps = 11/374 (2%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M ++N V W  +I+  TQ+G   + + LF +  +S    D+FT S  +S C        G
Sbjct: 1   MPKRNVVSWNSLISGYTQMGFYHEVMNLFKEARMSDLRLDKFTFSNALSVCGRTLDLRLG 60

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           + +H+    +GL   V +  SL+DMY KC   G +D +R VF+   + + +SW ++I GY
Sbjct: 61  RLIHALITVSGLGGPVLLTNSLIDMYCKC---GRIDWARLVFESADELDSVSWNSLIAGY 117

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV--AEQVYTHAVKRGRA 420
           V+ G  D E ++L   M++  +  N +   S LKACG+   S++   + ++  AVK G  
Sbjct: 118 VRIGSND-EMLRLLVKMLRHGLNLNSYALGSALKACGSNFSSSIECGKMLHGCAVKLGLD 176

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK-----NLNSEKAFE 475
           LD  VG +L+  YA+ G +EDA K F+ + + N+V YN M+  + +     +  + +A  
Sbjct: 177 LDVVVGTALLDTYAKIGDLEDATKIFKLMPDPNVVMYNAMIAGFLQMETMADEFANEAMY 236

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  E++  G+  S +TF+S+L   S+I A   G+QIHA+I K   +S+  I NAL+ +YS
Sbjct: 237 LFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDEFIGNALVELYS 296

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
              ++E   + F      +V+SWTS+I G  ++G     L +F+++L  G KP+  T   
Sbjct: 297 LSGSIEDGLKCFHSTPKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISI 356

Query: 596 VLSACSHAGLISEG 609
           +LSAC++   +  G
Sbjct: 357 MLSACANLAAVKSG 370



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 129/249 (51%), Gaps = 3/249 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + D    +A++    M  +G  P   T+S +LK+C     F  GK +H+ + +  L+ + 
Sbjct: 226 MADEFANEAMYLFFEMQSRGMKPSEFTFSSILKACSTIEAFECGKQIHAQIFKYNLQSDE 285

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I N+L+ LYS  G + +  K F S   K D+VSW+S+I  +V  G+    + +F E+L 
Sbjct: 286 FIGNALVELYSLSGSIEDGLKCFHST-PKLDVVSWTSLIVGHVQNGQFEGGLTLFHELLF 344

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  P+E+  S ++ AC+N   V  G  I+ + +K G  +  + +  + I M+ K   D+
Sbjct: 345 SGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGIGNFTI-IQNSQICMYAKCG-DI 402

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           +SA   F +    + V W++MI+   Q GC ++A+ LF  M  SG  P+  T  GV+ AC
Sbjct: 403 DSANMTFKETKNPDIVSWSVMISSNAQHGCAKEAVDLFELMKGSGIAPNHITFLGVLVAC 462

Query: 294 SELELFTSG 302
           S   L   G
Sbjct: 463 SHGGLVEEG 471



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/209 (27%), Positives = 99/209 (47%), Gaps = 1/209 (0%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ H+ +G+ +  +     +   G  PD  T S++L +C        G+ +H+   ++ +
Sbjct: 323 IVGHVQNGQFEGGLTLFHELLFSGRKPDEFTISIMLSACANLAAVKSGEQIHAYAIKTGI 382

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
              ++I NS I +Y+KCGD++ AN  FK   N  DIVSWS MISS    G   +A+ +F 
Sbjct: 383 GNFTIIQNSQICMYAKCGDIDSANMTFKETKNP-DIVSWSVMISSNAQHGCAKEAVDLFE 441

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M   G  PN   F  V+ ACS+   V  G   +  + K      +V     ++D+  + 
Sbjct: 442 LMKGSGIAPNHITFLGVLVACSHGGLVEEGLRYFEIMKKDHGITPNVKHSACIVDLLGRA 501

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRC 258
               E+   + D   E + V W  +++ C
Sbjct: 502 GRLAEAESFIMDSGFEGDPVMWRSLLSAC 530


>gi|302791701|ref|XP_002977617.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
 gi|300154987|gb|EFJ21621.1| hypothetical protein SELMODRAFT_106776 [Selaginella moellendorffii]
          Length = 805

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 295/775 (38%), Positives = 435/775 (56%), Gaps = 24/775 (3%)

Query: 97  GKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           GKL+HS ++ S     +  + +SL+ +Y +CG L  A  +F  + +K  IV W+ +IS+Y
Sbjct: 45  GKLLHSKISSSPSLSRDGYLASSLVYMYLRCGSLESAIDVFHKIAHK-SIVLWTVLISAY 103

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           V+RG    AI +F  +L+ G   +   F +V+ ACS+ E +A G +I+   ++ G    +
Sbjct: 104 VSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQE 163

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLD 273
           + V  AL+ M+ + GS  L  A  +F  +    + V W  MIT  +Q G PR+A+ +F  
Sbjct: 164 I-VASALVSMYGRCGS--LRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYR 220

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSG--KQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           M+  G  PD  T   V  ACS      +   K  H+    TGL  DV V  +LV+ YA+C
Sbjct: 221 MLQLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETGLGSDVVVATALVNAYARC 280

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +D +RK F  M + N +SWT++I  + Q G     AV+ F  M+   V P   T 
Sbjct: 281 ---GEIDCARKFFAEMPERNAVSWTSMIAAFTQIG--HLLAVETFHAMLLEGVVPTRSTL 335

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF----E 447
            + L+ C +L    VA  V   A + G   D  +   L+  YAR    EDA + F    E
Sbjct: 336 FAALEGCEDL---RVARLVEAIAQEIGVVTDVAIVTDLVMAYARCDGQEDAIRVFSAREE 392

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
             ++  LV+   M+  YA+  +    F+L     + G+      + + L   +S+ A+ +
Sbjct: 393 GEWDAALVT--AMIAVYAQCRDRRSTFKLWGAAIERGISPDRILYITALDACASLAALSE 450

Query: 508 GEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           G QIHA +      + +  + NA++SMY +C ++  A   F  M  R+ ISW +M++  A
Sbjct: 451 GRQIHACVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASA 510

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           +HG      ++F  ML +G     I ++ +LSAC+HAGL+  G +HF +M  +HG+V   
Sbjct: 511 QHGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPAT 570

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHY CMVDLLGR G L +A   +++MP+  D   W   +GACR++GDTE G+ AAE +LE
Sbjct: 571 EHYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLE 630

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
                 AA++ L N+Y++AG W+  A +RK M +  L K  G S IE  +KVH+F V + 
Sbjct: 631 LRADHTAAYVALCNIYSAAGRWDDAAAVRKIMADLGLRKIPGVSSIEIRSKVHEFVVRDR 690

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           SHP++  IYAEL+++   I+  GY   T  VLH++EEEQK Q L  HSEK+A+AFG++ST
Sbjct: 691 SHPQSEAIYAELERVMGAIERAGYRAVTGEVLHDVEEEQKEQLLRFHSEKLAIAFGMMST 750

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +   +RV KNLRVC DCH A K+IS V GREIV+RD  RFHH KDG CSC DYW
Sbjct: 751 PQGSTLRVIKNLRVCVDCHNASKFISKVFGREIVVRDVRRFHHFKDGACSCGDYW 805



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 150/563 (26%), Positives = 267/563 (47%), Gaps = 26/563 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G    AI     + Q+G   D   +  +L +C        G+L+H     + L   
Sbjct: 103 YVSRGHSAAAIALFHRILQEGIALDAIVFVSVLSACSSEEFLAAGRLIHRCAVEAGLGLQ 162

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ ++L+S+Y +CG L +AN +F  +    D+V W++MI++    G   +A+ +F  ML
Sbjct: 163 EIVASALVSMYGRCGSLRDANALFGHLERHLDVVLWNAMITANSQNGSPREALEIFYRML 222

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           +LG  P+   F +V +ACS++ ++    +   +  L + G   SDV V  AL++ + +  
Sbjct: 223 QLGIPPDLVTFVSVFKACSSSPSLRASQVKGFHACLDETG-LGSDVVVATALVNAYARCG 281

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
            +++ A K F +M E+N V WT MI   TQ+G    A+  F  M+L G +P R TL   +
Sbjct: 282 -EIDCARKFFAEMPERNAVSWTSMIAAFTQIG-HLLAVETFHAMLLEGVVPTRSTLFAAL 339

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
             C +L +    + + + A   G+  DV +   LV  YA+C  DG  +D+ +VF    + 
Sbjct: 340 EGCEDLRV---ARLVEAIAQEIGVVTDVAIVTDLVMAYARC--DGQ-EDAIRVFSAREEG 393

Query: 351 --NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +    TA+I  Y Q   R +   KL+   I+  ++P+   + + L AC +L   +   
Sbjct: 394 EWDAALVTAMIAVYAQCRDR-RSTFKLWGAAIERGISPDRILYITALDACASLAALSEGR 452

Query: 409 QVYTHAVKRGRALDDCV--GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           Q++   V   R LD  V  GN+++SMY + G + DAR AF+ +  ++ +S+N M+ A A+
Sbjct: 453 QIHA-CVAADRRLDRDVTLGNAIVSMYGQCGSLRDARDAFDGMPARDEISWNAMLSASAQ 511

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHC 525
           +   E   +L   +   G       F +LLS  +  G +  G E   A     G      
Sbjct: 512 HGRVEDCCDLFRAMLQEGFDAERIAFLNLLSACAHAGLVKAGCEHFSAMTGDHGVVPATE 571

Query: 526 IYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAAR---ALEIFYKM 581
            Y  ++ +  R   +  A  + + M    +  +W +++     +G   R   A E   ++
Sbjct: 572 HYGCMVDLLGRKGRLADAHGIVQAMPVPPDAATWMALMGACRIYGDTERGRFAAERVLEL 631

Query: 582 LADGIKPNGITYIAVLSACSHAG 604
            AD    +   Y+A+ +  S AG
Sbjct: 632 RAD----HTAAYVALCNIYSAAG 650


>gi|20146256|dbj|BAB89038.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
            sativa Japonica Group]
 gi|125571007|gb|EAZ12522.1| hypothetical protein OsJ_02419 [Oryza sativa Japonica Group]
          Length = 1062

 Score =  504 bits (1297), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 276/753 (36%), Positives = 446/753 (59%), Gaps = 15/753 (1%)

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV---EMLE 173
            ++L+S +++ G L+EA  I+  +  +R+ V+ + +I+  V +     A  +F+   +   
Sbjct: 317  SALVSAFARHGMLDEAKDIYLGL-KERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAA 375

Query: 174  LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            +         SA+    +  + +  G  ++  +L+ G+    + V   L++M+ K G++D
Sbjct: 376  VNVDTYVVLLSAIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAID 435

Query: 233  LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
               A +VF  M  ++ + W  +IT   Q G    A+  +  M  +   P  F     +S+
Sbjct: 436  --KACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSS 493

Query: 293  CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            C+ L L  +G+QLH  A++ GL LD  V  +LV MY +C   G + +  ++F+ M  H+V
Sbjct: 494  CAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGEC---GRMSECWEIFNSMSAHDV 550

Query: 353  MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +SW +I+     S     E+V++FS+M++  + PN  TF + L A   L    + +Q+++
Sbjct: 551  VSWNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHS 610

Query: 413  HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKNLNSE 471
              +K G   D+ V N+L+S YA+SG ++   + F  +   ++ +S+N+M+  Y  N + +
Sbjct: 611  VMLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQ 670

Query: 472  KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            +A + +  +  +       TF+ +L+  +S+ A+ +G ++HA  ++S  ES+  + +AL+
Sbjct: 671  EAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALV 730

Query: 532  SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
             MYS+C  ++ A +VF  M  +N  SW SMI+G+A+HG   +ALEIF +M   G  P+ +
Sbjct: 731  DMYSKCGRIDYASKVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHV 790

Query: 592  TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
            T+++VLSACSHAGL+  G  +F  M D +GI+ R+EHY+C++DLLGR+G L +  E+++ 
Sbjct: 791  TFVSVLSACSHAGLVERGLDYFELMED-YGILPRIEHYSCVIDLLGRAGELDKIQEYMKR 849

Query: 652  MPLSADVLVWRTFLGACRV---HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
            MP+  + L+WRT L AC+        +LG  A+ M+LE +PQ+P  ++L S  +A+ G W
Sbjct: 850  MPMKPNTLIWRTVLVACQQSKHRAKIDLGTEASRMLLELEPQNPVNYVLSSKFHAAIGRW 909

Query: 709  EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
            E  A  R  MK   + KEAG SW+   + VH F  G+ SHP T EIY +L+ L  KI+  
Sbjct: 910  EDTAKARAAMKGAAVKKEAGRSWVTLTDGVHTFIAGDRSHPNTKEIYEKLNFLIQKIRNA 969

Query: 769  GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
            GY+P T +VLH+LEEE K + L  HSEK+AVAF L  +S   PIR+ KNLRVCGDCHTA 
Sbjct: 970  GYVPLTEYVLHDLEEENKEELLRYHSEKLAVAFVLTRSSSGGPIRIMKNLRVCGDCHTAF 1029

Query: 829  KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +YIS + GR+I+LRDS RFHH KDGKCSC DYW
Sbjct: 1030 RYISQIVGRQIILRDSIRFHHFKDGKCSCGDYW 1062



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 171/668 (25%), Positives = 326/668 (48%), Gaps = 42/668 (6%)

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG--KLVHSLLTRSKLEPNSVILNSLI 120
           +F   L    G  P   T+  +L++C  S    LG    VH L+++++   N+ + N+LI
Sbjct: 153 LFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALI 212

Query: 121 SLYSKC--GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM------L 172
           S+Y  C  G    A ++F +    RD+++W++++S Y  RG  +    +F  M      +
Sbjct: 213 SMYGSCSVGPPILAQRVFDTT-PVRDLITWNALMSVYAKRGDAICTFTLFRAMQYDDSGI 271

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           EL   P E+ F ++I A +   + ++G +  ++  +LK G   SD+ VG AL+  F +  
Sbjct: 272 ELR--PTEHTFGSLITA-TYLSSCSLGLLDQLFVRVLKSG-CSSDLYVGSALVSAFARHG 327

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFT--LS 287
           + L+ A  ++  + E+N V    +I    +      A  +F+    S  +  D +   LS
Sbjct: 328 M-LDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSAAVNVDTYVVLLS 386

Query: 288 GVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
            +    +  +    G+++H+  +R G +   + V   LV+MYAKC   G++D + +VF  
Sbjct: 387 AIAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKC---GAIDKACRVFQL 443

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   + +SW  IIT   Q+ G  + A+  +  M Q  + P++F   S L +C  L     
Sbjct: 444 MEARDRISWNTIITALDQN-GYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAA 502

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            +Q++  AVK G  LD  V N+L+ MY   GRM +  + F S+   ++VS+N+++   A 
Sbjct: 503 GQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVSWNSIMGVMAS 562

Query: 467 NLNS-EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +     ++ ++   +  +G+  +  TF + L+  + +  +  G+QIH+ ++K G   ++ 
Sbjct: 563 SQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNA 622

Query: 526 IYNALISMYSRCANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
           + NAL+S Y++  +V++  ++F  M   R+ ISW SMI+G+  +G    A++    M+  
Sbjct: 623 VDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHS 682

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKH----FRSMYDEHGIVQRMEHYACMVDLLGRSG 640
               +  T+  VL+AC+    +  G +      RS  +   +V+     + +VD+  + G
Sbjct: 683 EQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVE-----SALVDMYSKCG 737

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE-QDPQDPAAHILLS 699
            +  A +   SM    +   W + +     HG   LG+ A E+  E Q+  +   H+   
Sbjct: 738 RIDYASKVFHSMS-QKNEFSWNSMISGYARHG---LGRKALEIFEEMQESGESPDHVTFV 793

Query: 700 NLYASAGH 707
           ++ ++  H
Sbjct: 794 SVLSACSH 801



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 234/471 (49%), Gaps = 30/471 (6%)

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+ +   L++ + KG+  L++A +VFD M  +N V WT +I+     G P DA  LF  M
Sbjct: 99  DLFLANHLVNSYAKGA-RLDAARRVFDGMPGRNAVSWTCLISGHVLSGLPEDAFPLFRAM 157

Query: 275 ILSG--FLPDRFTLSGVVSAC--SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           +  G    P  FT   V+ AC  S  +      Q+H    +T    +  V  +L+ MY  
Sbjct: 158 LREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKTEFTSNTTVCNALISMYGS 217

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS-------DMIQGQ 383
           C+V G    +++VFD     ++++W A+++ Y + G    +A+  F+       D    +
Sbjct: 218 CSV-GPPILAQRVFDTTPVRDLITWNALMSVYAKRG----DAICTFTLFRAMQYDDSGIE 272

Query: 384 VAPNHFTFASVLKACGNLLDS---NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           + P   TF S++ A    L S    + +Q++   +K G + D  VG++L+S +AR G ++
Sbjct: 273 LRPTEHTFGSLITA--TYLSSCSLGLLDQLFVRVLKSGCSSDLYVGSALVSAFARHGMLD 330

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +A+  +  L E+N V+ N ++    K  + E A E+     D+    +  T+  LLS  +
Sbjct: 331 EAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGARDSA-AVNVDTYVVLLSAIA 389

Query: 501 SIG----AIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
                   + KG ++HA ++++G       + N L++MY++C  ++ A +VF+ ME R+ 
Sbjct: 390 EFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCGAIDKACRVFQLMEARDR 449

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           ISW ++IT   ++G+   A+  +  M  + I P+    I+ LS+C+  GL++ G +    
Sbjct: 450 ISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAG-QQLHC 508

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
              + G+         +V + G  G ++E  E   SM  + DV+ W + +G
Sbjct: 509 DAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMS-AHDVVSWNSIMG 558



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 147/589 (24%), Positives = 275/589 (46%), Gaps = 38/589 (6%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  + +  L  +  + N L++ Y+K   L+ A ++F  M   R+ VSW+ +IS +V  G
Sbjct: 87  LHLEVVKRGLTHDLFLANHLVNSYAKGARLDAARRVFDGMPG-RNAVSWTCLISGHVLSG 145

Query: 160 KQVDAIHMFVEMLELG-FC-PNEYCFSAVIRAC--SNTENVAIGHIIYGFLLKCGYFDSD 215
              DA  +F  ML  G  C P  + F +V+RAC  S  + +     ++G + K   F S+
Sbjct: 146 LPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVSKT-EFTSN 204

Query: 216 VCVGCALIDMFVKGSVDLES-AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
             V  ALI M+   SV     A +VFD    ++ + W  +++   + G       LF  M
Sbjct: 205 TTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICTFTLFRAM 264

Query: 275 IL--SG--FLPDRFTLSGVVSA-----CSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
               SG    P   T   +++A     CS L L     QL    +++G + D+ VG +LV
Sbjct: 265 QYDDSGIELRPTEHTFGSLITATYLSSCS-LGLL---DQLFVRVLKSGCSSDLYVGSALV 320

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
             +A+    G +D+++ ++  + + N ++   +I G V+     + A ++F    +   A
Sbjct: 321 SAFAR---HGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQ-QHGEAAAEIFMGA-RDSAA 375

Query: 386 PNHFTFASVLKACGNLLDSNVAEQ-------VYTHAVKRGRALDD-CVGNSLISMYARSG 437
            N  T+  +L A   + + + AEQ       V+ H ++ G       V N L++MYA+ G
Sbjct: 376 VNVDTYVVLLSA---IAEFSTAEQGLRKGREVHAHVLRAGHIYRKIAVSNGLVNMYAKCG 432

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++ A + F+ +  ++ +S+NT++ A  +N   E A      +    +G S +   S LS
Sbjct: 433 AIDKACRVFQLMEARDRISWNTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLS 492

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + +G +  G+Q+H   +K G   +  + NAL+ MY  C  +   +++F  M   +V+S
Sbjct: 493 SCAGLGLLAAGQQLHCDAVKWGLYLDTSVSNALVKMYGECGRMSECWEIFNSMSAHDVVS 552

Query: 558 WTSMITGFA-KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           W S++   A        ++++F  M+  G+ PN +T++  L+A +   ++  G K   S+
Sbjct: 553 WNSIMGVMASSQAPITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELG-KQIHSV 611

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
             +HG+ +       ++    +SG +         M    D + W + +
Sbjct: 612 MLKHGVTEDNAVDNALMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMI 660



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 187/354 (52%), Gaps = 10/354 (2%)

Query: 48  NRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I  L+ +G  + A+    LM Q    P        L SC        G+ +H    +
Sbjct: 453 NTIITALDQNGYCEAAMMNYCLMRQNSIGPSNFAAISGLSSCAGLGLLAAGQQLHCDAVK 512

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV-DAI 165
             L  ++ + N+L+ +Y +CG ++E  +IF SM +  D+VSW+S++    +    + +++
Sbjct: 513 WGLYLDTSVSNALVKMYGECGRMSECWEIFNSM-SAHDVVSWNSIMGVMASSQAPITESV 571

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F  M++ G  PN+  F   + A +    + +G  I+  +LK G  + D  V  AL+  
Sbjct: 572 QVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTE-DNAVDNALMSC 630

Query: 226 FVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           + K S D++S  ++F +M+  ++ + W  MI+     G  ++A+     M+ S  + D  
Sbjct: 631 YAK-SGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMMDHC 689

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T S V++AC+ +     G ++H++ +R+ L  DV V  +LVDMY+KC   G +D + KVF
Sbjct: 690 TFSIVLNACASVAALERGMEMHAFGLRSHLESDVVVESALVDMYSKC---GRIDYASKVF 746

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             M   N  SW ++I+GY +  G  ++A+++F +M +   +P+H TF SVL AC
Sbjct: 747 HSMSQKNEFSWNSMISGYARH-GLGRKALEIFEEMQESGESPDHVTFVSVLSAC 799



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 209/428 (48%), Gaps = 34/428 (7%)

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
            S + LH   ++ GL  D+ +   LV+ YAK      +D +R+VFD M   N +SWT +I
Sbjct: 82  ASPESLHLEVVKRGLTHDLFLANHLVNSYAK---GARLDAARRVFDGMPGRNAVSWTCLI 138

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVA--PNHFTFASVLKACGNLLDSNVAEQVYTHAV-- 415
           +G+V S G  ++A  LF  M++      P  FTF SVL+AC +     +   V  H +  
Sbjct: 139 SGHVLS-GLPEDAFPLFRAMLREGPGCRPTSFTFGSVLRACQDSGPDRLGFAVQVHGLVS 197

Query: 416 KRGRALDDCVGNSLISMYARS--GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           K     +  V N+LISMY     G    A++ F++   ++L+++N ++  YAK  ++   
Sbjct: 198 KTEFTSNTTVCNALISMYGSCSVGPPILAQRVFDTTPVRDLITWNALMSVYAKRGDAICT 257

Query: 474 FELLHEIE--DTGVG--TSAYTFASLLSGAS-SIGAIGKGEQIHARIIKSGFESNHCIYN 528
           F L   ++  D+G+    + +TF SL++    S  ++G  +Q+  R++KSG  S+  + +
Sbjct: 258 FTLFRAMQYDDSGIELRPTEHTFGSLITATYLSSCSLGLLDQLFVRVLKSGCSSDLYVGS 317

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+S ++R   ++ A  ++  +++RN ++   +I G  K      A EIF     D    
Sbjct: 318 ALVSAFARHGMLDEAKDIYLGLKERNAVTLNGLIAGLVKQQHGEAAAEIFMGA-RDSAAV 376

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY-------ACMVDLLGRSGS 641
           N  TY+ +LSA +      +G +  R +   H  V R  H          +V++  + G+
Sbjct: 377 NVDTYVVLLSAIAEFSTAEQGLRKGREV---HAHVLRAGHIYRKIAVSNGLVNMYAKCGA 433

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM---ILEQDPQDPAAHILL 698
           + +A    + M  + D + W T + A   +G  E    AA M   ++ Q+   P+    +
Sbjct: 434 IDKACRVFQLME-ARDRISWNTIITALDQNGYCE----AAMMNYCLMRQNSIGPSNFAAI 488

Query: 699 SNLYASAG 706
           S L + AG
Sbjct: 489 SGLSSCAG 496



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 104/385 (27%), Positives = 182/385 (47%), Gaps = 27/385 (7%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           + +++     M + G  P+  T+   L +        LGK +HS++ +  +  ++ + N+
Sbjct: 567 ITESVQVFSNMMKSGLVPNKVTFVNFLAALTPLSVLELGKQIHSVMLKHGVTEDNAVDNA 626

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+S Y+K GD++   ++F  M  +RD +SW+SMIS Y+  G   +A+     M+      
Sbjct: 627 LMSCYAKSGDVDSCERLFSRMSGRRDAISWNSMISGYIYNGHLQEAMDCVCLMMHSEQMM 686

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           +   FS V+ AC++   +  G  ++ F L+  + +SDV V  AL+DM+ K G +D  S  
Sbjct: 687 DHCTFSIVLNACASVAALERGMEMHAFGLR-SHLESDVVVESALVDMYSKCGRIDYAS-- 743

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           KVF  M++KN   W  MI+   + G  R A+ +F +M  SG  PD  T   V+SACS   
Sbjct: 744 KVFHSMSQKNEFSWNSMISGYARHGLGRKALEIFEEMQESGESPDHVTFVSVLSACSHAG 803

Query: 298 LFTSG----KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
           L   G    + +  + I   +    CV    +D+  +    G +D  ++   RM +  N 
Sbjct: 804 LVERGLDYFELMEDYGILPRIEHYSCV----IDLLGRA---GELDKIQEYMKRMPMKPNT 856

Query: 353 MSWTAIITGYVQSGGRDK-----EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
           + W  ++    QS  R K     EA ++  ++ + Q   N+   +    A G   D+  A
Sbjct: 857 LIWRTVLVACQQSKHRAKIDLGTEASRMLLEL-EPQNPVNYVLSSKFHAAIGRWEDTAKA 915

Query: 408 EQVYTHAVKRGRALDDCVGNSLISM 432
                 A  +G A+    G S +++
Sbjct: 916 R-----AAMKGAAVKKEAGRSWVTL 935



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 106/209 (50%), Gaps = 4/209 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G +Q+A+  + LM       D  T+S++L +C        G  +H+   RS LE +
Sbjct: 663 YIYNGHLQEAMDCVCLMMHSEQMMDHCTFSIVLNACASVAALERGMEMHAFGLRSHLESD 722

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V+ ++L+ +YSKCG ++ A+K+F SM  K +  SW+SMIS Y   G    A+ +F EM 
Sbjct: 723 VVVESALVDMYSKCGRIDYASKVFHSMSQKNEF-SWNSMISGYARHGLGRKALEIFEEMQ 781

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           E G  P+   F +V+ ACS+   V  G   +  +   G         C +ID+  +   +
Sbjct: 782 ESGESPDHVTFVSVLSACSHAGLVERGLDYFELMEDYGILPRIEHYSC-VIDLLGRAG-E 839

Query: 233 LESAYKVFDKMTEK-NTVGWTLMITRCTQ 260
           L+   +   +M  K NT+ W  ++  C Q
Sbjct: 840 LDKIQEYMKRMPMKPNTLIWRTVLVACQQ 868


>gi|52076596|dbj|BAD45498.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|218187337|gb|EEC69764.1| hypothetical protein OsI_00012 [Oryza sativa Indica Group]
          Length = 810

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 272/806 (33%), Positives = 456/806 (56%), Gaps = 26/806 (3%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           D R+ K  F  D++T + N        L L+S + S + H  + +   +       N   
Sbjct: 31  DARMVKTGF--DVLTYRLN--------LGLRSLLSSGHLHRARAMFDQMPHK----NIFS 76

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
           LN ++S YS  GDL  A  +F S    R+  +W+ M+ ++   G+  DA+ +F  ML  G
Sbjct: 77  LNLILSAYSSSGDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEG 135

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+    + V+    N     +  + + F +K G  D+ V V   L+D + K  + L +
Sbjct: 136 VIPDRVTVTTVL----NLPGCTVPSL-HPFAIKFG-LDTHVFVCNTLLDAYCKHGL-LAA 188

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VF +M +K+ V +  M+  C++ G    A++LF  M  +G     FT S +++  + 
Sbjct: 189 ARRVFLEMHDKDAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGIPATHFTFSSILTVAAG 248

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           +     G Q+H+  +R+   L+V V  SL+D Y+KC     +DD R++FD M + + +S+
Sbjct: 249 MAHLLLGHQVHALVLRSTSVLNVFVNNSLLDFYSKCDC---LDDMRRLFDEMPERDNVSY 305

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
             II  Y  +       ++LF +M +         +A++L   G+L D ++ +Q++   V
Sbjct: 306 NVIIAAYAWNQCA-ATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLV 364

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
             G A +D +GN+LI MY++ G ++ A+  F +  EK+ +S+  ++  Y +N   E+A +
Sbjct: 365 LLGLASEDLLGNALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQ 424

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  ++   G+     TF+S++  +SS+  IG G Q+H+ +I+SG++S+    + L+ MY+
Sbjct: 425 LFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYA 484

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  ++ A + F EM +RN ISW ++I+ +A +G A  A+++F  ML  G  P+ +T+++
Sbjct: 485 KCGCLDEALRTFDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLS 544

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VL+ACSH GL  E  K+F  M  ++ I    EHYAC++D LGR G  ++  + +  MP  
Sbjct: 545 VLAACSHNGLADECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFK 604

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           AD ++W + L +CR+HG+ EL + AA+ +   +P D   +++LSN+YA AG WE  A ++
Sbjct: 605 ADPIIWTSILHSCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVK 664

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K M++R + KE+G SW+E   K++ F   + + P   EI  ELD+L  ++ + GY PD  
Sbjct: 665 KIMRDRGVRKESGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDIT 724

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
             LH ++ E K++ L  HSE++A+AF L++T    PIR+ KNL  C DCH  IK IS + 
Sbjct: 725 CALHMVDHELKLESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIV 784

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            R+I++RDS RFHH KDG CSC DYW
Sbjct: 785 NRDIIVRDSRRFHHFKDGVCSCGDYW 810



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 47/140 (33%), Positives = 83/140 (59%), Gaps = 1/140 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G+ ++A+     M + G  PD  T+S ++K+        LG+ +HS L RS  + +
Sbjct: 413 YVQNGQHEEALQLFSDMRRAGLRPDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSS 472

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               + L+ +Y+KCG L+EA + F  M  +R+ +SW+++IS+Y + G+  +AI MF  ML
Sbjct: 473 VFSGSVLVDMYAKCGCLDEALRTFDEM-PERNSISWNAVISAYAHYGEAKNAIKMFEGML 531

Query: 173 ELGFCPNEYCFSAVIRACSN 192
             GF P+   F +V+ ACS+
Sbjct: 532 HCGFNPDSVTFLSVLAACSH 551


>gi|147857367|emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 264/679 (38%), Positives = 410/679 (60%), Gaps = 8/679 (1%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +V++AC       +G  I+GF+LK G  D DV VG AL+ M+ + +  +E A  VFDKM 
Sbjct: 99  SVLKACGQVSWTQLGKEIHGFVLKKG-LDRDVFVGNALMLMYGECAC-VEYARLVFDKMM 156

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           E++ V W+ MI   ++      A+ L  +M      P    +  +V+  ++      GK 
Sbjct: 157 ERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKA 216

Query: 305 LHSWAIRT--GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +H++ IR      + V    +L+DMYAKC   G +  +R++F+ +    V+SWTA+I G 
Sbjct: 217 MHAYVIRNSNNEHMGVPTTTALLDMYAKC---GHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           ++S  R +E  KLF  M +  + PN  T  S++  CG      + +Q++ + ++ G ++ 
Sbjct: 274 IRSN-RLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVS 332

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             +  +L+ MY +   + +AR  F+S   ++++ +  M+ AYA+    ++AF L  ++  
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           +GV  +  T  SLLS  +  GA+  G+ +H+ I K   E +  +  AL+ MY++C ++ A
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDINA 452

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A ++F E   R++  W ++ITGFA HG+   AL+IF +M   G+KPN IT+I +L ACSH
Sbjct: 453 AGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHACSH 512

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGL++EG K F  M    G+V ++EHY CMVDLLGR+G L EA E I+SMP+  + +VW 
Sbjct: 513 AGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIVWG 572

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             + ACR+H + +LG+ AA  +LE +P++   ++L+SN+YA+A  W   A +RK MK   
Sbjct: 573 ALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAAGVRKTMKTVG 632

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           + KE G S IE +  VH+F +G+ SHP+   I   L ++  K+ E GY+PDT+ VL  ++
Sbjct: 633 MKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRINEMLAEMRRKLNEAGYVPDTSTVLLNID 692

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE+K   L  HSEK+A+AFGLIST+ S PIR+ KNLRVC DCH A K +S + GR I++R
Sbjct: 693 EEEKETALTYHSEKLAMAFGLISTAPSTPIRIVKNLRVCNDCHAATKLLSKIYGRVIIVR 752

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D NRFHH ++G CSC DYW
Sbjct: 753 DRNRFHHFREGYCSCGDYW 771



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/491 (26%), Positives = 254/491 (51%), Gaps = 15/491 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +LK+C +     LGK +H  + +  L+ +  + N+L+ +Y +C  +  A  +F  M  +R
Sbjct: 100 VLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFDKM-MER 158

Query: 144 DIVSWSSMISSYVNRGKQVD-AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           D+VSWS+MI S ++R K+ D A+ +  EM  +   P+E    +++   ++T N+ +G  +
Sbjct: 159 DVVSWSTMIRS-LSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAM 217

Query: 203 YGFLLKCGYFDS-DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           + ++++    +   V    AL+DM+ K G + L  A ++F+ +T+K  V WT MI  C +
Sbjct: 218 HAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGL--ARQLFNGLTQKTVVSWTAMIAGCIR 275

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                +  +LF+ M      P+  T+  ++  C        GKQLH++ +R G ++ + +
Sbjct: 276 SNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSLAL 335

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +LVDMY KC+    + ++R +FD   + +VM WTA+++ Y Q+   D +A  LF  M 
Sbjct: 336 ATALVDMYGKCS---DIRNARALFDSTQNRDVMIWTAMLSAYAQANCID-QAFNLFDQMR 391

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMYARSGRM 439
              V P   T  S+L  C      ++ + V+++ + + R   DC+ N+ L+ MYA+ G +
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY-IDKERVEVDCILNTALVDMYAKCGDI 450

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             A + F     +++  +N ++  +A +   E+A ++  E+E  GV  +  TF  LL   
Sbjct: 451 NAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHAC 510

Query: 500 SSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVIS 557
           S  G + +G+++  +++ + G       Y  ++ +  R   ++ A ++ K M  + N I 
Sbjct: 511 SHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSMPIKPNTIV 570

Query: 558 WTSMITGFAKH 568
           W +++     H
Sbjct: 571 WGALVAACRLH 581



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 216/414 (52%), Gaps = 21/414 (5%)

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           F    V+ AC ++     GK++H + ++ GL  DV VG +L+ MY +C     V+ +R V
Sbjct: 95  FMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGEC---ACVEYARLV 151

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKE---AVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           FD+M++ +V+SW+ +I    +S  R+KE   A++L  +M   QV P+     S++    +
Sbjct: 152 FDKMMERDVVSWSTMI----RSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFAD 207

Query: 401 LLDSNVAEQVYTHAVK--RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
             +  + + ++ + ++      +      +L+ MYA+ G +  AR+ F  L +K +VS+ 
Sbjct: 208 TANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWT 267

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+    ++   E+  +L   +++  +  +  T  SL+      GA+  G+Q+HA I+++
Sbjct: 268 AMIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRN 327

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
           GF  +  +  AL+ MY +C+++  A  +F   ++R+V+ WT+M++ +A+     +A  +F
Sbjct: 328 GFSVSLALATALVDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLF 387

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLG 637
            +M   G++P  +T +++LS C+ AG +  G W H  S  D+  +         +VD+  
Sbjct: 388 DQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVH--SYIDKERVEVDCILNTALVDMYA 445

Query: 638 RSGSLTEALE-FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           + G +  A   FI +  +S D+ +W   +    +HG    G+ A ++  E + Q
Sbjct: 446 KCGDINAAGRLFIEA--ISRDICMWNAIITGFAMHG---YGEEALDIFAEMERQ 494



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 210/422 (49%), Gaps = 19/422 (4%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVI--LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
           N  +GK +H+ + R+    +  +    +L+ +Y+KCG L  A ++F  +  ++ +VSW++
Sbjct: 210 NMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGL-TQKTVVSWTA 268

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           MI+  +   +  +   +F+ M E    PNE    ++I  C  T  + +G  ++ ++L+ G
Sbjct: 269 MIAGCIRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNG 328

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
            F   + +  AL+DM+ K S D+ +A  +FD    ++ + WT M++   Q  C   A  L
Sbjct: 329 -FSVSLALATALVDMYGKCS-DIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNL 386

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M  SG  P + T+  ++S C+       GK +HS+  +  + +D  +  +LVDMYAK
Sbjct: 387 FDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAK 446

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G ++ + ++F   +  ++  W AIITG+    G  +EA+ +F++M +  V PN  T
Sbjct: 447 C---GDINAAGRLFIEAISRDICMWNAIITGFAMH-GYGEEALDIFAEMERQGVKPNDIT 502

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKR-GRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           F  +L AC +       ++++   V   G          ++ +  R+G +++A +  +S+
Sbjct: 503 FIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAGLLDEAHEMIKSM 562

Query: 450 -FEKNLVSYNTMVDAYAKNLN---SEKAFELLHEIEDTGVG-----TSAYTFASLLSGAS 500
             + N + +  +V A   + N    E A   L EIE    G     ++ Y  A+  S A+
Sbjct: 563 PIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMSNIYAAANRWSDAA 622

Query: 501 SI 502
            +
Sbjct: 623 GV 624



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/455 (23%), Positives = 197/455 (43%), Gaps = 53/455 (11%)

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
           +F   SVLKACG +  + + ++++   +K+G   D  VGN+L+ MY     +E AR  F+
Sbjct: 94  NFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDRDVFVGNALMLMYGECACVEYARLVFD 153

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            + E+++VS++TM+ + ++N   + A EL+ E+    V  S     S+++  +    +  
Sbjct: 154 KMMERDVVSWSTMIRSLSRNKEFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRM 213

Query: 508 GEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
           G+ +HA +I++    +  +    AL+ MY++C ++  A Q+F  +  + V+SWT+MI G 
Sbjct: 214 GKAMHAYVIRNSNNEHMGVPTTTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGC 273

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            +        ++F +M  + I PN IT ++++  C   G +  G K   +    +G    
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLG-KQLHAYILRNGFSVS 332

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA------------------ 667
           +     +VD+ G+   +  A     S   + DV++W   L A                  
Sbjct: 333 LALATALVDMYGKCSDIRNARALFDSTQ-NRDVMIWTAMLSAYAQANCIDQAFNLFDQMR 391

Query: 668 -----------------CRVHGDTELGKHAAEMI-LEQDPQDPAAHILLSNLYASAGHWE 709
                            C V G  +LGK     I  E+   D   +  L ++YA  G   
Sbjct: 392 TSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTALVDMYAKCGDIN 451

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
               +      R++     C W            GE    + L+I+AE+++  +K  +  
Sbjct: 452 AAGRLFIEAISRDI-----CMWNAIITGFAMHGYGE----EALDIFAEMERQGVKPNDIT 502

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           ++     +LH       V    +  EK+   FGL+
Sbjct: 503 FIG----LLHACSHAGLVTEGKKLFEKMVHTFGLV 533



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 149/309 (48%), Gaps = 10/309 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +   R+++       M ++   P+  T   L+  C  +    LGK +H+ + R+    + 
Sbjct: 274 IRSNRLEEGTKLFIRMQEENIFPNEITMLSLIVECGFTGALQLGKQLHAYILRNGFSVSL 333

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  +L+ +Y KC D+  A  +F S  N RD++ W++M+S+Y        A ++F +M  
Sbjct: 334 ALATALVDMYGKCSDIRNARALFDSTQN-RDVMIWTAMLSAYAQANCIDQAFNLFDQMRT 392

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  P +    +++  C+    + +G  ++ ++ K    + D  +  AL+DM+ K   D+
Sbjct: 393 SGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDK-ERVEVDCILNTALVDMYAKCG-DI 450

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            +A ++F +   ++   W  +IT     G   +A+ +F +M   G  P+  T  G++ AC
Sbjct: 451 NAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPNDITFIGLLHAC 510

Query: 294 SELELFTSGKQLHSWAIRT-GLALDV-CVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDH 350
           S   L T GK+L    + T GL   +   GC +VD+  +    G +D++ ++   M +  
Sbjct: 511 SHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC-MVDLLGRA---GLLDEAHEMIKSMPIKP 566

Query: 351 NVMSWTAII 359
           N + W A++
Sbjct: 567 NTIVWGALV 575



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 5/202 (2%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           + +A    D M   G  P   T   LL  C  +    LGK VHS + + ++E + ++  +
Sbjct: 380 IDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVDCILNTA 439

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+ +Y+KCGD+N A ++F      RDI  W+++I+ +   G   +A+ +F EM   G  P
Sbjct: 440 LVDMYAKCGDINAAGRLFIE-AISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKP 498

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVKGSVDLESAY 237
           N+  F  ++ ACS+   V  G  ++  ++   G        GC ++D+  +  + L+ A+
Sbjct: 499 NDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGC-MVDLLGRAGL-LDEAH 556

Query: 238 KVFDKMTEK-NTVGWTLMITRC 258
           ++   M  K NT+ W  ++  C
Sbjct: 557 EMIKSMPIKPNTIVWGALVAAC 578


>gi|302765565|ref|XP_002966203.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
 gi|300165623|gb|EFJ32230.1| hypothetical protein SELMODRAFT_86405 [Selaginella moellendorffii]
          Length = 916

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 288/778 (37%), Positives = 449/778 (57%), Gaps = 24/778 (3%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
            ++VH  +  S LE +  +  +L+  Y KCG +  A ++F  +    D++ W++ I +  
Sbjct: 150 ARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI-QVPDLICWNAAIMACA 208

Query: 157 NRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              ++ D   + V  + L G  PN   F A++ +C +  ++ +   I+  + + G+   D
Sbjct: 209 GNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFL-GD 267

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V V  AL+ M+ + GSVD   +  VF+ M  +N V W  MI    Q G    A  ++  M
Sbjct: 268 VVVATALVTMYGRCGSVD--ESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAAFAIYWRM 325

Query: 275 ILSGFLPDRFT-LSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
              GF P++ T ++ + +ACS   +       LH W    GL  DV VG +LV MY    
Sbjct: 326 QQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALVTMYGST- 384

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G++D +R  FD +   N++SW A++T Y    GR +EA++LF+ M +  +APN  ++ 
Sbjct: 385 --GAIDRARAAFDAIPAKNIVSWNAMLTAY-GDNGRAREAMELFAAMKRQSLAPNKVSYL 441

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGR-ALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           +VL  C    D + A  ++   V  G  A +  + N ++ M+ARSG +E+A  AF++   
Sbjct: 442 AVLGCCE---DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAMAAFDATVV 498

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           K+ VS+NT V A +   +   A    + ++  G     +T  S++   + +G +  G  I
Sbjct: 499 KDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRSI 558

Query: 512 HARIIKS-GFESNHCIYNALISMYSRC-ANVEAAFQVFKEMED--RNVISWTSMITGFAK 567
             ++  +   E +  + +A+++M ++C ++V+   ++F  M D  +++++W +MI  +A+
Sbjct: 559 QQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIAAYAQ 618

Query: 568 HGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR- 625
           HG   +AL++F  M     ++P+  T+++VLS CSHAGL+ +G   F    +  GI Q+ 
Sbjct: 619 HGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREVLGIEQQP 678

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           +EHYAC+VD+LGR G L EA +FIR MPL AD +VW + LGAC  +GD E G+ AA   +
Sbjct: 679 VEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGERAARAFI 738

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA-GCSWIEADNKVHKFHVG 744
           E    D   +++LSN+YA+AG WE    +R+ M ER + K A G S I   N+VH+F   
Sbjct: 739 ELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRAPGKSSIVVKNRVHEFFAR 798

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           + SHP++ EIYAEL++L   I+E GY+PDT  VLH++EEEQK Q L+ HSEK+A+AFGLI
Sbjct: 799 DRSHPQSDEIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKLAIAFGLI 858

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
           S      IRV KNLRVC DCHTA K+I+ VT REI +RD NRFHH  KDG+CSC DYW
Sbjct: 859 SVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECSCGDYW 916



 Score =  221 bits (564), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 161/619 (26%), Positives = 294/619 (47%), Gaps = 35/619 (5%)

Query: 74  NHPD---LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN 130
           +H D   ++T + LL+ CI   +   G+ +H  + +  L  N ++ N L+ +YSKC  L+
Sbjct: 17  DHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRA 189
           +AN  F ++   R I +W+++I++  +     D ++  +++ E     PN     AV+ A
Sbjct: 77  DANAAFSAL-RSRGIATWNTLIAAQSSPAAVFD-LYTRMKLEERAENRPNRLTIIAVLGA 134

Query: 190 CSNTENV------AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
            ++ +        A   I++   ++    + D+ V  AL+D + K    +ESA +VF ++
Sbjct: 135 IASGDPSSSSSSRAQARIVHDD-IRGSDLERDLFVATALLDAYGKCGC-VESALEVFSRI 192

Query: 244 TEKNTVGWTLMITRCT-QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
              + + W   I  C      P  A+ L   M L G LP+R +   ++S+C +       
Sbjct: 193 QVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLA 252

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           + +H+     G   DV V  +LV MY +C   GSVD+S  VF+ M   N +SW A+I  +
Sbjct: 253 RSIHARVEELGFLGDVVVATALVTMYGRC---GSVDESIAVFEAMAVRNHVSWNAMIAAF 309

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA--VKRGRA 420
            Q G R   A  ++  M Q    PN  TF + LKA  +    ++ E    H      G  
Sbjct: 310 AQCGHRSA-AFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLE 368

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            D  VG +L++MY  +G ++ AR AF+++  KN+VS+N M+ AY  N  + +A EL   +
Sbjct: 369 GDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAM 428

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCAN 539
           +   +  +  ++ ++L        + +   IHA ++ +G F     I N ++ M++R  +
Sbjct: 429 KRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGS 485

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +E A   F     ++ +SW + +   +       A+  FY M  +G +P+  T ++V+  
Sbjct: 486 LEEAMAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDV 545

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEH----YACMVDLLGRSGSLTEALE--FIRSMP 653
           C+  G +  G    RS+  +      +E      + +++++ + GS  +  E  F R   
Sbjct: 546 CADLGTLELG----RSIQQQLSAAIEVERDVVVESAVMNMVAKCGSSVDECERLFARMPD 601

Query: 654 LSADVLVWRTFLGACRVHG 672
              D++ W T + A   HG
Sbjct: 602 DRKDLVAWNTMIAAYAQHG 620



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 140/550 (25%), Positives = 271/550 (49%), Gaps = 41/550 (7%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ND R  +A+  +  M  +G  P+  ++  +L SC    +  L + +H+ +       + V
Sbjct: 210 NDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEELGFLGDVV 269

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +L+++Y +CG ++E+  +F++M   R+ VSW++MI+++   G +  A  ++  M + 
Sbjct: 270 VATALVTMYGRCGSVDESIAVFEAMA-VRNHVSWNAMIAAFAQCGHRSAAFAIYWRMQQE 328

Query: 175 GFCPNEYCFSAVIRAC--SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSV 231
           GF PN+  F   ++A   S+++++     ++G+ + C   + DV VG AL+ M+   G++
Sbjct: 329 GFRPNKITFVTALKAACSSSSQDLGESAALHGW-IACAGLEGDVMVGTALVTMYGSTGAI 387

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A   FD +  KN V W  M+T     G  R+A+ LF  M      P++ +   V+ 
Sbjct: 388 D--RARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMELFAAMKRQSLAPNKVSYLAVLG 445

Query: 292 ACSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            C ++   +  + +H+  +  GL A +  +   +V M+A+    GS++++   FD  +  
Sbjct: 446 CCEDV---SEARSIHAEVVGNGLFAQESSIANGVVRMFAR---SGSLEEAMAAFDATVVK 499

Query: 351 NVMSWTAIITGYVQSGGRDKE-AVKLFSDMIQGQVAPNHFTFASVLKACGNL----LDSN 405
           + +SW   +     S   D   A+  F  M      P+ FT  SV+  C +L    L  +
Sbjct: 500 DSVSWNTKVAAL--SAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGTLELGRS 557

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSG-RMEDARKAFESLFE--KNLVSYNTMVD 462
           + +Q+ + A++  R  D  V +++++M A+ G  +++  + F  + +  K+LV++NTM+ 
Sbjct: 558 IQQQL-SAAIEVER--DVVVESAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNTMIA 614

Query: 463 AYAKNLNSEKAFELLHEIED-TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS--- 518
           AYA++ +  KA +L   ++  + V   + TF S+LSG S  G +  G  IH   +     
Sbjct: 615 AYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDG--IHCFFLAREVL 672

Query: 519 GFESNHCI-YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG------F 570
           G E      Y  L+ +  R   +  A    ++M    + + WTS++   + +G       
Sbjct: 673 GIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGER 732

Query: 571 AARALEIFYK 580
           AARA    Y+
Sbjct: 733 AARAFIELYR 742


>gi|19697432|gb|AAL93067.1|AC093180_14 hypothetical protein [Oryza sativa Japonica Group]
          Length = 1012

 Score =  503 bits (1296), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 276/772 (35%), Positives = 453/772 (58%), Gaps = 15/772 (1%)

Query: 76  PDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTR----SKLEPNSVILNSLISLYSKCGDL 129
           P +D+++    L+ CI   +   G+ VH  + R     +L+      N L+++Y K G L
Sbjct: 55  PGVDSFACARQLQGCIARGDARGGRAVHGHVVRRGGVGRLD--LFCANVLLNMYGKLGPL 112

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
             A ++F  M  +R++VS+ +++ ++  RG    A  +F  +   G   N++  + +++ 
Sbjct: 113 ASARRLFDRMP-ERNMVSFVTLVQAHAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKL 171

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
               +   +   ++    K G+ D +  VG  LID +   S+ +  A  VF+ +  K+ V
Sbjct: 172 AIAMDAAGLAGGVHSCAWKLGH-DHNAFVGSGLIDAYSLCSL-VSDAEHVFNGIVRKDAV 229

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            WT M++  ++  CP +A R+F  M +SG  P+ F L+ V+ A   L     GK +H  A
Sbjct: 230 VWTAMVSCYSENDCPENAFRVFSKMRVSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCA 289

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I+T    +  VG +L+DMYAKC   G + D+R  F+ +   +V+  + +I+ Y QS  ++
Sbjct: 290 IKTLNDTEPHVGGALLDMYAKC---GDIKDARLAFEMIPYDDVILLSFMISRYAQSN-QN 345

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           ++A +LF  +++  V PN ++ +SVL+AC N++  +  +Q++ HA+K G   D  VGN+L
Sbjct: 346 EQAFELFLRLMRSSVLPNEYSLSSVLQACTNMVQLDFGKQIHNHAIKIGHESDLFVGNAL 405

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           +  YA+   M+ + K F SL + N VS+NT+V  ++++   E+A  +  E++   +  + 
Sbjct: 406 MDFYAKCNDMDSSLKIFSSLRDANEVSWNTIVVGFSQSGLGEEALSVFCEMQAAQMPCTQ 465

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            T++S+L   +S  +I    QIH  I KS F ++  I N+LI  Y++C  +  A +VF+ 
Sbjct: 466 VTYSSVLRACASTASIRHAGQIHCSIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQH 525

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           + +R++ISW ++I+G+A HG AA ALE+F +M    ++ N IT++A+LS CS  GL++ G
Sbjct: 526 LMERDIISWNAIISGYALHGQAADALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHG 585

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
              F SM  +HGI   MEHY C+V LLGR+G L +AL+FI  +P +   +VWR  L +C 
Sbjct: 586 LSLFDSMRIDHGIKPSMEHYTCIVRLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCI 645

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
           +H +  LG+ +AE ILE +PQD   ++LLSN+YA+AG  + VA +RK M+   + K  G 
Sbjct: 646 IHKNVALGRFSAEKILEIEPQDETTYVLLSNMYAAAGSLDQVALLRKSMRNIGVRKVPGL 705

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQY 789
           SW+E   ++H F VG   HP    I A L+ L LK    GY+PD N VLH++++EQK + 
Sbjct: 706 SWVEIKGEIHAFSVGSVDHPDMRVINAMLEWLNLKTSREGYIPDINVVLHDVDKEQKTRM 765

Query: 790 LFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           L+ HSE++A+A+GL+ T    PIR+ KNLR C DCHTA   IS +  REI++
Sbjct: 766 LWVHSERLALAYGLVMTPPGHPIRILKNLRSCLDCHTAFTVISKIVKREIIV 817



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 156/548 (28%), Positives = 271/548 (49%), Gaps = 11/548 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  + A      +  +G+  +    + +LK  I      L   VHS   +   + N
Sbjct: 137 HAQRGDFEAAAALFRRLRWEGHEVNQFVLTTMLKLAIAMDAAGLAGGVHSCAWKLGHDHN 196

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + + + LI  YS C  +++A  +F  +  ++D V W++M+S Y       +A  +F +M 
Sbjct: 197 AFVGSGLIDAYSLCSLVSDAEHVFNGI-VRKDAVVWTAMVSCYSENDCPENAFRVFSKMR 255

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN +  ++V++A     +V +G  I+G  +K    D++  VG AL+DM+ K   D
Sbjct: 256 VSGCKPNPFALTSVLKAAVCLPSVVLGKGIHGCAIKT-LNDTEPHVGGALLDMYAKCG-D 313

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A   F+ +   + +  + MI+R  Q      A  LFL ++ S  LP+ ++LS V+ A
Sbjct: 314 IKDARLAFEMIPYDDVILLSFMISRYAQSNQNEQAFELFLRLMRSSVLPNEYSLSSVLQA 373

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ +     GKQ+H+ AI+ G   D+ VG +L+D YAKC     +D S K+F  + D N 
Sbjct: 374 CTNMVQLDFGKQIHNHAIKIGHESDLFVGNALMDFYAKCN---DMDSSLKIFSSLRDANE 430

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW  I+ G+ QS G  +EA+ +F +M   Q+     T++SVL+AC +      A Q++ 
Sbjct: 431 VSWNTIVVGFSQS-GLGEEALSVFCEMQAAQMPCTQVTYSSVLRACASTASIRHAGQIHC 489

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
              K     D  +GNSLI  YA+ G + DA K F+ L E++++S+N ++  YA +  +  
Sbjct: 490 SIEKSTFNNDTVIGNSLIDTYAKCGYIRDALKVFQHLMERDIISWNAIISGYALHGQAAD 549

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALI 531
           A EL   +  + V ++  TF +LLS  SS G +  G  +   + I  G + +   Y  ++
Sbjct: 550 ALELFDRMNKSNVESNDITFVALLSVCSSTGLVNHGLSLFDSMRIDHGIKPSMEHYTCIV 609

Query: 532 SMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
            +  R   +  A Q   ++    + + W ++++    H   A       K+L   I+P  
Sbjct: 610 RLLGRAGRLNDALQFIGDIPSAPSAMVWRALLSSCIIHKNVALGRFSAEKILE--IEPQD 667

Query: 591 ITYIAVLS 598
            T   +LS
Sbjct: 668 ETTYVLLS 675


>gi|297807343|ref|XP_002871555.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317392|gb|EFH47814.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 822

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 288/790 (36%), Positives = 446/790 (56%), Gaps = 16/790 (2%)

Query: 76  PDLDT--YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           P LD+  Y  +L+ CIR  +    K +H  + +     +    N L++ Y K G   +A 
Sbjct: 45  PCLDSHAYGTMLRRCIRKNDSVSAKAIHCDILKKGSCLDLFATNILLNAYVKAGFDKDAL 104

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
            +F  M  +R+ VS+ ++   Y  +    D + ++  +   G   N + F++ ++   + 
Sbjct: 105 NLFDEM-PERNNVSYVTLTQGYACQ----DPVGLYSRLHREGHELNPHVFTSFLKLFVSL 159

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWT 252
           +   I   ++  ++K GY DS+  VG ALI+ + V GSVD  SA  VF+ +  K+ V W 
Sbjct: 160 DKAEICWWLHSPIVKLGY-DSNAFVGAALINAYSVCGSVD--SARSVFEGILCKDIVVWA 216

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +++   + GC  D+++L   M + GF+P+ +T    + A   L  F   K +H   ++T
Sbjct: 217 GIVSCYVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKT 276

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
              LD  VG  L+ +Y +    G + D+ KVF+ M  ++V+ W+ +I  + Q+G  +K A
Sbjct: 277 CYELDPRVGVGLLQLYTQL---GDMSDAFKVFNEMPKNDVVPWSFMIARFCQNGFCNK-A 332

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           V +F  M +G V PN FT +S+L  C     S + EQ++   VK G  LD  V N+LI +
Sbjct: 333 VDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVGFDLDVYVSNALIDV 392

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+  +M+ A K F  L  KN+VS+NT++  Y       KA  +  E     V  +  TF
Sbjct: 393 YAKCEKMDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTF 452

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +S L   +S+ ++  G Q+H   IK+       + N+LI MY++C +++ A  VF EME 
Sbjct: 453 SSALGACASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKCGDIKVAQTVFNEMET 512

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            +V SW ++I+G++ HG   +AL IF  M     KPNG+T++ VLS CS+AGLI +G   
Sbjct: 513 IDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQGQDC 572

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F SM  +HGI   +EHY CMV L GRSG L +A+  I  +P    V++WR  L A     
Sbjct: 573 FESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQY 632

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           + E  + +AE IL+ +P+D A ++LLSN+YA A  W  VA+IRK MKE+ + KE G SWI
Sbjct: 633 NEEFARRSAEEILKINPKDEATYVLLSNMYAGAKQWANVASIRKSMKEKGVKKEPGLSWI 692

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E    VH F VG + HP    I   L+ L +K    GY+PD N VL ++++E+K + L+ 
Sbjct: 693 EHQGDVHFFSVGSSDHPDMKLINGMLEWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWV 752

Query: 793 HSEKIAVAFGLISTSKSKP-IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
           HSE++A+A+GL+    S+  I + KNLR+C DCH+A+K IS +  R++V+RD NRFHH  
Sbjct: 753 HSERLALAYGLVRMPSSRNRILIMKNLRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFH 812

Query: 852 DGKCSCNDYW 861
            G CSC+D+W
Sbjct: 813 AGVCSCDDHW 822



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 221/433 (51%), Gaps = 15/433 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G  + ++  L  M   G  P+  T+   LK+ I    FH  K VH  + ++  E +
Sbjct: 222 YVENGCFEDSLQLLSRMGMDGFMPNNYTFDTALKASIGLGAFHFAKSVHGQILKTCYELD 281

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +   L+ LY++ GD+++A K+F  M  K D+V WS MI+ +   G    A+ +F+ M 
Sbjct: 282 PRVGVGLLQLYTQLGDMSDAFKVFNEM-PKNDVVPWSFMIARFCQNGFCNKAVDIFIRMR 340

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           E    PNE+  S+++  C+  +   +G  ++G ++K G FD DV V  ALID++ K    
Sbjct: 341 EGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLVVKVG-FDLDVYVSNALIDVYAKCE-K 398

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +++A K+F +++ KN V W  +I     LG    A+ +F + + +       T S  + A
Sbjct: 399 MDTAVKLFAELSSKNVVSWNTVIVGYENLGEGGKALNMFREALRNQVSVTEVTFSSALGA 458

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ L     G Q+H  AI+T  A  V V  SL+DMYAKC   G +  ++ VF+ M   +V
Sbjct: 459 CASLASMELGVQVHGLAIKTNNAKRVAVSNSLIDMYAKC---GDIKVAQTVFNEMETIDV 515

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQV 410
            SW A+I+GY  + G  ++A+++F  M      PN  TF  VL  C N  L+D     Q 
Sbjct: 516 ASWNALISGY-STHGLGRQALRIFDIMKGSDCKPNGLTFLGVLSGCSNAGLIDQG---QD 571

Query: 411 YTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN 467
              ++     ++ C+ +   ++ ++ RSG+++ A    E + +E +++ +  M+ A    
Sbjct: 572 CFESMICDHGIEPCLEHYTCMVRLFGRSGQLDKAMNLIEGIPYEPSVMIWRAMLSASMNQ 631

Query: 468 LNSEKAFELLHEI 480
            N E A     EI
Sbjct: 632 YNEEFARRSAEEI 644



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 75/259 (28%), Positives = 130/259 (50%), Gaps = 3/259 (1%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P S  +     +G   KA+     M +    P+  T S +L  C   +   LG+ +H L+
Sbjct: 315 PWSFMIARFCQNGFCNKAVDIFIRMREGFVVPNEFTLSSILNGCAIGKCSGLGEQLHGLV 374

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            +   + +  + N+LI +Y+KC  ++ A K+F  + +K ++VSW+++I  Y N G+   A
Sbjct: 375 VKVGFDLDVYVSNALIDVYAKCEKMDTAVKLFAELSSK-NVVSWNTVIVGYENLGEGGKA 433

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           ++MF E L       E  FS+ + AC++  ++ +G  ++G  +K       V V  +LID
Sbjct: 434 LNMFREALRNQVSVTEVTFSSALGACASLASMELGVQVHGLAIKTNNAKR-VAVSNSLID 492

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K   D++ A  VF++M   +   W  +I+  +  G  R A+R+F  M  S   P+  
Sbjct: 493 MYAKCG-DIKVAQTVFNEMETIDVASWNALISGYSTHGLGRQALRIFDIMKGSDCKPNGL 551

Query: 285 TLSGVVSACSELELFTSGK 303
           T  GV+S CS   L   G+
Sbjct: 552 TFLGVLSGCSNAGLIDQGQ 570


>gi|222617261|gb|EEE53393.1| hypothetical protein OsJ_36441 [Oryza sativa Japonica Group]
          Length = 1151

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 269/768 (35%), Positives = 448/768 (58%), Gaps = 7/768 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  ++A+     M + G  P     S +L SC ++  F  G+L+H+   +      
Sbjct: 118 YAQNGLGEEALGLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSE 177

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N++I+LY +CG    A ++F  M + RD V+++++IS +   G    A+ +F EM 
Sbjct: 178 IFVGNAVITLYLRCGSFRLAERVFCDMPH-RDTVTFNTLISGHAQCGHGEHALEIFEEMQ 236

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+    S+++ AC++  ++  G  ++ +L K G   SD  +  +L+D++VK   D
Sbjct: 237 FSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG-ISSDYIMEGSLLDLYVKCG-D 294

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E+A  +F+     N V W LM+    Q+     +  LF  M  +G  P++FT   ++  
Sbjct: 295 VETALVIFNSSDRTNVVLWNLMLVAFGQINDLAKSFELFCQMQAAGIRPNQFTYPCILRT 354

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       G+Q+HS +++TG   D+ V   L+DMY+K    G ++ +R+V + + + +V
Sbjct: 355 CTCTREIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY---GWLEKARRVLEMLKEKDV 411

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT++I GYVQ     K+A+  F +M +  + P++   AS +  C  +       Q++ 
Sbjct: 412 VSWTSMIAGYVQHEC-CKDALAAFKEMQKCGIWPDNIGLASAISGCAGINAMRQGLQIHA 470

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                G + D  + N+L+++YAR GR+ +A  +FE +  K+ ++ N +V  +A++   E+
Sbjct: 471 RIYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEMELKDGITGNGLVSGFAQSGLHEE 530

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++   ++ +GV  + +TF S LS ++++  I +G+QIHAR+IK+G      + NALIS
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y +C + E A   F EM +RN +SW ++IT  ++HG    AL++F +M  +GIKPN +T
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDLFDQMKKEGIKPNDVT 650

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +I VL+ACSH GL+ EG  +F+SM DE+GI  R +HYAC++D+ GR+G L  A +FI  M
Sbjct: 651 FIGVLAACSHVGLVEEGLSYFKSMSDEYGIRPRPDHYACVIDIFGRAGQLDRAKKFIEEM 710

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P++AD +VWRT L AC+VH + E+G+ AA+ +LE +P D A+++LLSN YA    W    
Sbjct: 711 PIAADAMVWRTLLSACKVHKNIEVGEFAAKHLLELEPHDSASYVLLSNAYAVTEKWANRD 770

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +RK M++R + KE G SWIE  N VH F VG+  HP   +IY  L  +  ++ + GY  
Sbjct: 771 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 830

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +   + H+ E+E +      HSEK+AV FGL+S     P+RV KNLRV
Sbjct: 831 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 878



 Score =  302 bits (773), Expect = 6e-79,   Method: Compositional matrix adjust.
 Identities = 191/609 (31%), Positives = 323/609 (53%), Gaps = 15/609 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCI-RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           D   Q G    LD ++  L++C    R + +   +H+      L    ++ N LI LYSK
Sbjct: 31  DKARQHGGLGPLD-FACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLLIDLYSK 89

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
            G +  A ++F+ + + RD VSW +M+S Y   G   +A+ ++ +M   G  P  Y  S+
Sbjct: 90  NGLVLPARRVFEEL-SARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTPYVLSS 148

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           V+ +C+  E  A G +I+    K G F S++ VG A+I ++++ GS  L  A +VF  M 
Sbjct: 149 VLSSCTKAELFAQGRLIHAQGYKHG-FCSEIFVGNAVITLYLRCGSFRL--AERVFCDMP 205

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++TV +  +I+   Q G    A+ +F +M  SG  PD  T+S +++AC+ L     G Q
Sbjct: 206 HRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKGTQ 265

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LHS+  + G++ D  +  SL+D+Y KC   G V+ +  +F+     NV+ W  ++  + Q
Sbjct: 266 LHSYLFKAGISSDYIMEGSLLDLYVKC---GDVETALVIFNSSDRTNVVLWNLMLVAFGQ 322

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
                K + +LF  M    + PN FT+  +L+ C    + ++ EQ+++ +VK G   D  
Sbjct: 323 INDLAK-SFELFCQMQAAGIRPNQFTYPCILRTCTCTREIDLGEQIHSLSVKTGFESDMY 381

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V   LI MY++ G +E AR+  E L EK++VS+ +M+  Y ++   + A     E++  G
Sbjct: 382 VSGVLIDMYSKYGWLEKARRVLEMLKEKDVVSWTSMIAGYVQHECCKDALAAFKEMQKCG 441

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +       AS +SG + I A+ +G QIHARI  SG+  +  I+NAL+++Y+RC  +  AF
Sbjct: 442 IWPDNIGLASAISGCAGINAMRQGLQIHARIYVSGYSGDVSIWNALVNLYARCGRIREAF 501

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
             F+EME ++ I+   +++GFA+ G    AL++F +M   G+K N  T+++ LSA ++  
Sbjct: 502 SSFEEMELKDGITGNGLVSGFAQSGLHEEALKVFMRMDQSGVKHNVFTFVSALSASANLA 561

Query: 605 LISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
            I +G + H R +   H      E    ++ L G+ GS  +A      M    +V  W T
Sbjct: 562 EIKQGKQIHARVIKTGHSF--ETEVGNALISLYGKCGSFEDAKMEFSEMSERNEV-SWNT 618

Query: 664 FLGACRVHG 672
            + +C  HG
Sbjct: 619 IITSCSQHG 627



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 92/298 (30%), Positives = 154/298 (51%), Gaps = 3/298 (1%)

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           + + LF+D  +         FA  L+AC GN     V  +++  AV RG      VGN L
Sbjct: 24  KVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAVTRGLGKYRIVGNLL 83

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I +Y+++G +  AR+ FE L  ++ VS+  M+  YA+N   E+A  L  ++   GV  + 
Sbjct: 84  IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALGLYRQMHRAGVVPTP 143

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           Y  +S+LS  +      +G  IHA+  K GF S   + NA+I++Y RC +   A +VF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRLIHAQGYKHGFCSEIFVGNAVITLYLRCGSFRLAERVFCD 203

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  R+ +++ ++I+G A+ G    ALEIF +M   G+ P+ +T  ++L+AC+  G + +G
Sbjct: 204 MPHRDTVTFNTLISGHAQCGHGEHALEIFEEMQFSGLSPDCVTISSLLAACASLGDLQKG 263

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
                S   + GI         ++DL  + G +  AL    S   + +V++W   L A
Sbjct: 264 -TQLHSYLFKAGISSDYIMEGSLLDLYVKCGDVETALVIFNSSDRT-NVVLWNLMLVA 319


>gi|225456890|ref|XP_002277458.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070
           [Vitis vinifera]
          Length = 698

 Score =  503 bits (1295), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 241/629 (38%), Positives = 382/629 (60%), Gaps = 4/629 (0%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A  +F ++ E ++  + +MI   T    P +AI LF +M  +   PD FT   ++  
Sbjct: 74  MDYAVSIFRQIDEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKV 133

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS L+  + G+Q+H+  ++ G      V  +L+ MYA C   G V+ +R+VFD M + NV
Sbjct: 134 CSRLQALSEGEQIHALIMKCGFGSHGFVKNTLIHMYANC---GEVEVARRVFDEMSERNV 190

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +W ++  GY +SG  + E VKLF +M++  +  +  T  SVL ACG L D  + E +  
Sbjct: 191 RTWNSMFAGYTKSGNWE-EVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINR 249

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +  ++G   +  +  SL+ MYA+ G+++ AR+ F+ +  +++V+++ M+  Y++     +
Sbjct: 250 YVEEKGLKGNPTLITSLVDMYAKCGQVDTARRLFDQMDRRDVVAWSAMISGYSQASRCRE 309

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A +L HE++   +  +  T  S+LS  + +GA+  G+ +H  I K   +    +  AL+ 
Sbjct: 310 ALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMD 369

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
            Y++C +VE++ +VF +M  +NV+SWT +I G A +G   +ALE FY ML   ++PN +T
Sbjct: 370 FYAKCGSVESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVT 429

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +I VLSACSHAGL+ EG   F SM  + GI  R+EHY CMVD+LGR+G + EA +FI++M
Sbjct: 430 FIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNM 489

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+  + ++WRT L +C+VH + E+G+ + + ++  +P     +ILLSN+YAS G WE   
Sbjct: 490 PIQPNAVIWRTLLASCKVHKNVEIGEESLKQLIILEPTHSGDYILLSNIYASVGRWEDAL 549

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R  MKE+ + K  GCS IE D  +H+F   +  H ++ EIY  ++ +  +IK  GY+P
Sbjct: 550 KVRGEMKEKGIKKTPGCSLIELDGVIHEFFAEDNVHSQSEEIYNAIEDMMKQIKSAGYVP 609

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           +T     + EE+ K   +  HSEK+A+AFGLI +     IR+ KNLRVC DCH A K +S
Sbjct: 610 NTAEARLDAEEDDKESSVSHHSEKLAIAFGLIKSPPGTTIRITKNLRVCTDCHNATKLVS 669

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V  REIV+RD  RFHH K+G CSCNDYW
Sbjct: 670 KVFNREIVVRDRTRFHHFKEGSCSCNDYW 698



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 143/492 (29%), Positives = 247/492 (50%), Gaps = 16/492 (3%)

Query: 82  SLLLKSC--IRSRN-FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           +L+L+ C  IR  N  H   +   LL + K+  N  +L S   L     D   A  IF+ 
Sbjct: 28  TLILEQCKTIRDLNEIHAHLIKTRLLLKPKVAEN--LLESAAILLPTSMDY--AVSIFRQ 83

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           + ++ D  +++ MI  +  +    +AI +F EM E    P+E+ F  +++ CS  + ++ 
Sbjct: 84  I-DEPDSPAYNIMIRGFTLKQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSE 142

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  I+  ++KCG F S   V   LI M+     ++E A +VFD+M+E+N   W  M    
Sbjct: 143 GEQIHALIMKCG-FGSHGFVKNTLIHMYANCG-EVEVARRVFDEMSERNVRTWNSMFAGY 200

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           T+ G   + ++LF +M+      D  TL  V++AC  L     G+ ++ +    GL  + 
Sbjct: 201 TKSGNWEEVVKLFHEMLELDIRFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNP 260

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +  SLVDMYAKC   G VD +R++FD+M   +V++W+A+I+GY Q+  R +EA+ LF +
Sbjct: 261 TLITSLVDMYAKC---GQVDTARRLFDQMDRRDVVAWSAMISGYSQA-SRCREALDLFHE 316

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M +  + PN  T  S+L +C  L      + V+    K+   L   +G +L+  YA+ G 
Sbjct: 317 MQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGTALMDFYAKCGS 376

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +E + + F  +  KN++S+  ++   A N   +KA E  + + +  V  +  TF  +LS 
Sbjct: 377 VESSIEVFGKMPVKNVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSA 436

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVI 556
            S  G + +G  +   + +  G E     Y  ++ +  R   +E AFQ  K M  + N +
Sbjct: 437 CSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGLIEEAFQFIKNMPIQPNAV 496

Query: 557 SWTSMITGFAKH 568
            W +++     H
Sbjct: 497 IWRTLLASCKVH 508



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 142/500 (28%), Positives = 249/500 (49%), Gaps = 49/500 (9%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            +AI     M +    PD  T+  +LK C R +    G+ +H+L+ +     +  + N+L
Sbjct: 106 HEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFVKNTL 165

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I +Y+ CG++  A ++F  M ++R++ +W+SM + Y   G   + + +F EMLEL    +
Sbjct: 166 IHMYANCGEVEVARRVFDEM-SERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDIRFD 224

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
           E    +V+ AC    ++ +G  I  ++ + G   +   +  +L+DM+ K G VD  +A +
Sbjct: 225 EVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLI-TSLVDMYAKCGQVD--TARR 281

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FD+M  ++ V W+ MI+  +Q    R+A+ LF +M  +   P+  T+  ++S+C+ L  
Sbjct: 282 LFDQMDRRDVVAWSAMISGYSQASRCREALDLFHEMQKANIDPNEITMVSILSSCAVLGA 341

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
             +GK +H +  +  + L V +G +L+D YAKC   GSV+ S +VF +M   NV+SWT +
Sbjct: 342 LETGKWVHFFIKKKRMKLTVTLGTALMDFYAKC---GSVESSIEVFGKMPVKNVLSWTVL 398

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA--VK 416
           I G + S G+ K+A++ F  M++  V PN  TF  VL AC             +HA  V 
Sbjct: 399 IQG-LASNGQGKKALEYFYLMLEKNVEPNDVTFIGVLSAC-------------SHAGLVD 444

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            GR L        +SM    G             E  +  Y  MVD   +    E+AF+ 
Sbjct: 445 EGRDL-------FVSMSRDFG------------IEPRIEHYGCMVDILGRAGLIEEAFQF 485

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-IYNALISMYS 535
              I++  +  +A  + +LL+       +  GE+   ++I    E  H   Y  L ++Y+
Sbjct: 486 ---IKNMPIQPNAVIWRTLLASCKVHKNVEIGEESLKQLII--LEPTHSGDYILLSNIYA 540

Query: 536 RCANVEAAFQVFKEMEDRNV 555
                E A +V  EM+++ +
Sbjct: 541 SVGRWEDALKVRGEMKEKGI 560



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 93/202 (46%), Gaps = 3/202 (1%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R ++A+     M +    P+  T   +L SC        GK VH  + + +++    +  
Sbjct: 306 RCREALDLFHEMQKANIDPNEITMVSILSSCAVLGALETGKWVHFFIKKKRMKLTVTLGT 365

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +L+  Y+KCG +  + ++F  M  K +++SW+ +I    + G+   A+  F  MLE    
Sbjct: 366 ALMDFYAKCGSVESSIEVFGKMPVK-NVLSWTVLIQGLASNGQGKKALEYFYLMLEKNVE 424

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           PN+  F  V+ ACS+   V  G  ++  + +    +  +     ++D+  +  + +E A+
Sbjct: 425 PNDVTFIGVLSACSHAGLVDEGRDLFVSMSRDFGIEPRIEHYGCMVDILGRAGL-IEEAF 483

Query: 238 KVFDKM-TEKNTVGWTLMITRC 258
           +    M  + N V W  ++  C
Sbjct: 484 QFIKNMPIQPNAVIWRTLLASC 505



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 49/251 (19%), Positives = 102/251 (40%), Gaps = 36/251 (14%)

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRC--ANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           +IHA +IK+       +   L+   +     +++ A  +F+++++ +  ++  MI GF  
Sbjct: 42  EIHAHLIKTRLLLKPKVAENLLESAAILLPTSMDYAVSIFRQIDEPDSPAYNIMIRGFTL 101

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSM---YDEHGIV 623
                 A+ +F +M  + ++P+  T+  +L  CS    +SEG + H   M   +  HG V
Sbjct: 102 KQSPHEAILLFKEMHENSVQPDEFTFPCILKVCSRLQALSEGEQIHALIMKCGFGSHGFV 161

Query: 624 Q--------------------------RMEHYACMVDLLGRSGSLTEALEFIRSM---PL 654
           +                           +  +  M     +SG+  E ++    M    +
Sbjct: 162 KNTLIHMYANCGEVEVARRVFDEMSERNVRTWNSMFAGYTKSGNWEEVVKLFHEMLELDI 221

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYASAGHWEYVAN 713
             D +   + L AC    D ELG+     + E+  + +P     L ++YA  G  +    
Sbjct: 222 RFDEVTLVSVLTACGRLADLELGEWINRYVEEKGLKGNPTLITSLVDMYAKCGQVDTARR 281

Query: 714 IRKRMKERNLI 724
           +  +M  R+++
Sbjct: 282 LFDQMDRRDVV 292


>gi|147865382|emb|CAN79811.1| hypothetical protein VITISV_018821 [Vitis vinifera]
          Length = 871

 Score =  503 bits (1294), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 287/797 (36%), Positives = 448/797 (56%), Gaps = 62/797 (7%)

Query: 119 LISLYSKCGDLNEANKIFKSM-GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +IS+Y       +A  + + +  +   +  W+ +I   V+ G   D + ++  M  LG+ 
Sbjct: 83  IISMYLTFNSPAKALSVLRRLHPSSHTVFWWNQLIRRSVHLGFLEDVLQLYRRMQRLGWR 142

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+ Y F  V++AC    +   G  ++  +   G F+ +V VG  L+ M+ +     E+A 
Sbjct: 143 PDHYTFPFVLKACGEIPSFRCGASVHAVVFASG-FEWNVFVGNGLVSMYGRCGA-WENAR 200

Query: 238 KVFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSAC 293
           +VFD+M E+   + V W  ++    Q G    A+++F  M    G  PD  +L  V+ AC
Sbjct: 201 QVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVNVLPAC 260

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + +  ++ GKQ+H +A+R+GL  DV VG ++VDMYAKC   G ++++ KVF+RM   +V+
Sbjct: 261 ASVGAWSRGKQVHGYALRSGLFEDVFVGNAVVDMYAKC---GMMEEANKVFERMKVKDVV 317

Query: 354 SWTAIITGYVQSGGRDK----------------------------------EAVKLFSDM 379
           SW A++TGY Q G  D                                   EA+ +F  M
Sbjct: 318 SWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDVFRQM 377

Query: 380 IQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDD-------CVGNSL 429
           +     PN  T  S+L  C   G LL     ++ + HA+K    LD+        V N+L
Sbjct: 378 LLCGSEPNVVTLVSLLSGCASAGTLLH---GKETHCHAIKWILNLDENDPGDDLMVINAL 434

Query: 430 ISMYARSGRMEDARKAFESLFEKN--LVSYNTMVDAYAKNLNSEKAFELLHEI--EDTGV 485
           I MY++    + AR  F+ +  K+  +V++  ++   A++  + +A EL  ++   D  V
Sbjct: 435 IDMYSKCKSPKAARAMFDLIPPKDRSVVTWTVLIGGNAQHGEANEALELFSQMLQPDNFV 494

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-IYNALISMYSRCANVEAAF 544
             +A+T +  L   + +GA+  G QIHA ++++ FES    + N LI MYS+  +V+AA 
Sbjct: 495 MPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGDVDAAR 554

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            VF  M  RN +SWTS++TG+  HG    AL+IFY+M    + P+G+T++ VL ACSH+G
Sbjct: 555 VVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYACSHSG 614

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           ++ +G  +F  M  + G+V   EHYACMVDLL R+G L EA+E IR MP+     VW   
Sbjct: 615 MVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPAVWVAL 674

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           L ACRV+ + ELG++AA  +LE +  +  ++ LLSN+YA+A  W+ VA IR  MK   + 
Sbjct: 675 LSACRVYANVELGEYAANQLLELESGNDGSYTLLSNIYANARCWKDVARIRYLMKNTGIK 734

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           K  GCSW++       F  G+ SHP + +IY  L  L  +IK  GY+PD  F LH++++E
Sbjct: 735 KRPGCSWVQGRKGTATFFAGDWSHPMSQQIYDLLRDLMQRIKALGYVPDNRFALHDVDDE 794

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           +K   L +HSEK+A+A+G+++T+   PIR+ KNLR CGDCH+A  YIS++   EI++RDS
Sbjct: 795 EKGDLLSEHSEKLALAYGILTTAPGAPIRITKNLRACGDCHSAFTYISIIIEHEIIVRDS 854

Query: 845 NRFHHIKDGKCSCNDYW 861
           +RFHH K+G CSC  YW
Sbjct: 855 SRFHHFKNGSCSCRGYW 871



 Score =  225 bits (573), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 159/547 (29%), Positives = 272/547 (49%), Gaps = 58/547 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  PD  T+  +LK+C    +F  G  VH+++  S  E N  + N L+S+Y +CG 
Sbjct: 136 MQRLGWRPDHYTFPFVLKACGEIPSFRCGASVHAVVFASGFEWNVFVGNGLVSMYGRCGA 195

Query: 129 LNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSA 185
              A ++F  M  +   D+VSW+S++++Y+  G  + A+ MF  M E LG  P+      
Sbjct: 196 WENARQVFDEMRERGVGDLVSWNSIVAAYMQGGDSIRAMKMFERMTEDLGIRPDAVSLVN 255

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+ AC++    + G  ++G+ L+ G F+ DV VG A++DM+ K  + +E A KVF++M  
Sbjct: 256 VLPACASVGAWSRGKQVHGYALRSGLFE-DVFVGNAVVDMYAKCGM-MEEANKVFERMKV 313

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLF-------------------------------LD- 273
           K+ V W  M+T  +Q+G   DA+ LF                               LD 
Sbjct: 314 KDVVSWNAMVTGYSQIGRFDDALGLFEKIREEKIELNVVTWSAVIAGYAQRGLGFEALDV 373

Query: 274 ---MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL-------DVCVGCS 323
              M+L G  P+  TL  ++S C+       GK+ H  AI+  L L       D+ V  +
Sbjct: 374 FRQMLLCGSEPNVVTLVSLLSGCASAGTLLHGKETHCHAIKWILNLDENDPGDDLMVINA 433

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRM--LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
           L+DMY+KC    S   +R +FD +   D +V++WT +I G  Q  G   EA++LFS M+Q
Sbjct: 434 LIDMYSKCK---SPKAARAMFDLIPPKDRSVVTWTVLIGGNAQH-GEANEALELFSQMLQ 489

Query: 382 GQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALDDCVGNSLISMYARSGR 438
               V PN FT +  L AC  L       Q++ + ++ R  +    V N LI MY++SG 
Sbjct: 490 PDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAMLFVANCLIDMYSKSGD 549

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ++ AR  F+++ ++N VS+ +++  Y  +   E+A ++ +E++   +     TF  +L  
Sbjct: 550 VDAARVVFDNMHQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQKVXLVPDGVTFVVVLYA 609

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
            S  G + +G      + K  G       Y  ++ + SR   ++ A ++ + M  +   +
Sbjct: 610 CSHSGMVDQGINYFNGMNKDFGVVPGAEHYACMVDLLSRAGRLDEAMELIRGMPMKPTPA 669

Query: 558 -WTSMIT 563
            W ++++
Sbjct: 670 VWVALLS 676



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/210 (27%), Positives = 103/210 (49%), Gaps = 14/210 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNH--PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           G   +A+     M Q  N   P+  T S  L +C R      G+ +H+ + R++ E   +
Sbjct: 475 GEANEALELFSQMLQPDNFVMPNAFTISCALMACARLGALRFGRQIHAYVLRNRFESAML 534

Query: 115 -ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + N LI +YSK GD++ A  +F +M ++R+ VSW+S+++ Y   G+  +A+ +F EM +
Sbjct: 535 FVANCLIDMYSKSGDVDAARVVFDNM-HQRNGVSWTSLMTGYGMHGRGEEALQIFYEMQK 593

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG----CALIDMFVKG 229
           +   P+   F  V+ ACS++  V  G   +  + K    D  V  G      ++D+  + 
Sbjct: 594 VXLVPDGVTFVVVLYACSHSGMVDQGINYFNGMNK----DFGVVPGAEHYACMVDLLSRA 649

Query: 230 SVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
              L+ A ++   M  K T   W  +++ C
Sbjct: 650 G-RLDEAMELIRGMPMKPTPAVWVALLSAC 678


>gi|224057824|ref|XP_002299342.1| predicted protein [Populus trichocarpa]
 gi|222846600|gb|EEE84147.1| predicted protein [Populus trichocarpa]
          Length = 684

 Score =  502 bits (1293), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 261/644 (40%), Positives = 391/644 (60%), Gaps = 12/644 (1%)

Query: 221 ALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
           +++ M+ K GS  L  A KVFD+M E+N V W  +I+   + G       +F +M+    
Sbjct: 50  SVLKMYCKCGS--LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELET 107

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            P+  T  G + +         GKQ+HS AIR+GL  +  V  ++ +MY KC   G ++ 
Sbjct: 108 KPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKC---GWLEG 164

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +  VF++M + N ++WT I+ GY Q+  R  +A+ LF+ M+   V  + + F+ VLKAC 
Sbjct: 165 AELVFEKMSEKNAVAWTGIMVGYTQAE-RQMDALALFAKMVNEGVELDEYVFSIVLKACA 223

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L + N   Q++ H VK G   +  VG  L+  Y +   +E A KAFE + E N VS++ 
Sbjct: 224 GLEELNFGRQIHGHIVKLGLESEVSVGTPLVDFYVKCSNLESATKAFEWISEPNDVSWSA 283

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           ++  Y +    E+A +    +    V  +++T+ S+    S++     G Q HA  IKS 
Sbjct: 284 LITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSS 343

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             +     +A+I+MYSRC  ++ A +VF+ ++D + ++WT++I G+A  G A  AL++F 
Sbjct: 344 LVAYQHGESAMITMYSRCGRLDYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFR 403

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M   G++PN +T+IAVL+ACSH+GL+ EG ++  SM   +G+   ++HY CMVD+  R+
Sbjct: 404 RMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRA 463

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L EALE IRSMP S D + W+  LG C  + + E+G+ AAE + + DP+D A +IL+ 
Sbjct: 464 GFLQEALELIRSMPFSPDAMSWKCLLGGCWTYRNLEIGELAAENLFQLDPEDTAGYILMF 523

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           NLYAS G W+  AN+RK M ERNL KE  CSWI    KVH+F VG+  HP+T EIY++L+
Sbjct: 524 NLYASFGKWKEAANVRKMMAERNLRKELSCSWITVKGKVHRFIVGDKHHPQTEEIYSKLE 583

Query: 760 QLALKI--KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            L   +  +E G L + + V + L E +  + L  HSE++A+AFGLIST  S P+ VFKN
Sbjct: 584 ALNDSVIKEETGLLTEED-VSNSLPERK--EQLLVHSERLALAFGLISTPSSAPVVVFKN 640

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LR C DCH   K +S++TGREIV+RDS RFHH K G+CSCNDYW
Sbjct: 641 LRACKDCHDFGKQVSLITGREIVVRDSFRFHHFKLGECSCNDYW 684



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 155/487 (31%), Positives = 263/487 (54%), Gaps = 9/487 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           +Y  L ++C + ++   G+L H  + R+   P   + NS++ +Y KCG L +A K+F  M
Sbjct: 12  SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGSLADARKVFDEM 71

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +R++VSW+++IS+Y   G       MF  MLEL   PN   +   +R+  N   + IG
Sbjct: 72  -RERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIG 130

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+   ++ G   S+  V  A+ +M+VK    LE A  VF+KM+EKN V WT ++   T
Sbjct: 131 KQIHSHAIRSG-LGSNASVNTAISNMYVKCGW-LEGAELVFEKMSEKNAVAWTGIMVGYT 188

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q     DA+ LF  M+  G   D +  S V+ AC+ LE    G+Q+H   ++ GL  +V 
Sbjct: 189 QAERQMDALALFAKMVNEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLGLESEVS 248

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG  LVD Y KC+   +++ + K F+ + + N +SW+A+ITGY Q  G  +EA+K F  +
Sbjct: 249 VGTPLVDFYVKCS---NLESATKAFEWISEPNDVSWSALITGYCQM-GEFEEALKTFESL 304

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               V  N FT+ S+ +AC  L D N   Q +  A+K          +++I+MY+R GR+
Sbjct: 305 RTRSVDINSFTYTSIFQACSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRCGRL 364

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + A + FES+ + + V++  ++  YA   N+ +A +L   ++D GV  +A TF ++L+  
Sbjct: 365 DYATRVFESIDDPDAVAWTAIIAGYAYQGNAPEALKLFRRMQDCGVRPNAVTFIAVLTAC 424

Query: 500 SSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVIS 557
           S  G + +G Q + +     G  +    Y+ ++ +YSR   ++ A ++ + M    + +S
Sbjct: 425 SHSGLVIEGRQYLESMSSNYGVATTIDHYDCMVDIYSRAGFLQEALELIRSMPFSPDAMS 484

Query: 558 WTSMITG 564
           W  ++ G
Sbjct: 485 WKCLLGG 491



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/415 (30%), Positives = 220/415 (53%), Gaps = 17/415 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   K       M +    P+  TY   L+S +      +GK +HS   RS L  N
Sbjct: 86  YAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLLNPSGLEIGKQIHSHAIRSGLGSN 145

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + +  ++ ++Y KCG L  A  +F+ M  K + V+W+ ++  Y    +Q+DA+ +F +M+
Sbjct: 146 ASVNTAISNMYVKCGWLEGAELVFEKMSEK-NAVAWTGIMVGYTQAERQMDALALFAKMV 204

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   +EY FS V++AC+  E +  G  I+G ++K G  +S+V VG  L+D +VK S +
Sbjct: 205 NEGVELDEYVFSIVLKACAGLEELNFGRQIHGHIVKLG-LESEVSVGTPLVDFYVKCS-N 262

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LESA K F+ ++E N V W+ +IT   Q+G   +A++ F  +       + FT + +  A
Sbjct: 263 LESATKAFEWISEPNDVSWSALITGYCQMGEFEEALKTFESLRTRSVDINSFTYTSIFQA 322

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS L  F SG Q H+ AI++ L        +++ MY++C   G +D + +VF+ + D + 
Sbjct: 323 CSALADFNSGAQAHADAIKSSLVAYQHGESAMITMYSRC---GRLDYATRVFESIDDPDA 379

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQ 409
           ++WTAII GY   G    EA+KLF  M    V PN  TF +VL AC   G +++     +
Sbjct: 380 VAWTAIIAGYAYQGNA-PEALKLFRRMQDCGVRPNAVTFIAVLTACSHSGLVIEGRQYLE 438

Query: 410 VYTHAVKRGRALD--DCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMV 461
             +        +D  DC    ++ +Y+R+G +++A +   S+ F  + +S+  ++
Sbjct: 439 SMSSNYGVATTIDHYDC----MVDIYSRAGFLQEALELIRSMPFSPDAMSWKCLL 489



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 123/225 (54%), Gaps = 10/225 (4%)

Query: 384 VAPNHFTFASVLKACG---NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           V+P   ++  + +ACG   +L D  +  +     VK      + + NS++ MY + G + 
Sbjct: 8   VSPR--SYKCLFEACGKIKSLFDGRLFHEQMQRTVKNP---PEFLENSVLKMYCKCGSLA 62

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           DARK F+ + E+NLVS+NT++ AYA+N   +K F +   + +     +  T+   L    
Sbjct: 63  DARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFLRSLL 122

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           +   +  G+QIH+  I+SG  SN  +  A+ +MY +C  +E A  VF++M ++N ++WT 
Sbjct: 123 NPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNAVAWTG 182

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           ++ G+ +      AL +F KM+ +G++ +   +  VL AC  AGL
Sbjct: 183 IMVGYTQAERQMDALALFAKMVNEGVELDEYVFSIVLKAC--AGL 225



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 64/118 (54%)

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +ED G+  S  ++  L      I ++  G   H ++ ++       + N+++ MY +C +
Sbjct: 1   MEDAGISVSPRSYKCLFEACGKIKSLFDGRLFHEQMQRTVKNPPEFLENSVLKMYCKCGS 60

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
           +  A +VF EM +RN++SW ++I+ +A++G   +   +F  ML    KPNG TYI  L
Sbjct: 61  LADARKVFDEMRERNLVSWNTIISAYAENGVFDKGFCMFSNMLELETKPNGSTYIGFL 118


>gi|297743367|emb|CBI36234.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 297/866 (34%), Positives = 483/866 (55%), Gaps = 20/866 (2%)

Query: 2   MTLSLPAP----AKIPPPSSFKPSNPSRQ-NLPPSSSPPFIAQPTTSEPLSNRLIYHLN- 55
           +  +LP P       P P +F  +  +RQ +L        +   + +    N LI  L  
Sbjct: 12  LQTNLPNPHHSKTHKPKPLNFSRNIQTRQISLRKHHEISVLNPSSITAQNPNSLILELCL 71

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
            G ++KA+  LD M +     + +TY  LL+ C   R    G  VHS ++++       +
Sbjct: 72  KGDLEKALIHLDSMQELQVSVEEETYIALLRLCEWKRAASEGSRVHSYVSKTVTRLGVRL 131

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+S++ + GDL EA  +F  M  +RD+ SW+ ++  Y   G   +A++++  ML +G
Sbjct: 132 GNALLSMFVRFGDLVEAWYVFGKMA-ERDLFSWNVLVGGYAKAGYFDEALNLYHRMLWVG 190

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+ Y F  V+R C    ++A G  ++  +++ G F+SDV V  ALI M+VK   D+ S
Sbjct: 191 IRPDVYTFPCVLRTCGGLPDLARGREVHLHVIRYG-FESDVDVVNALITMYVKCG-DIFS 248

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD+M  ++ + W  MI+   +     + +RLF  M      PD  T++ V+SAC  
Sbjct: 249 ARLVFDRMPRRDRISWNAMISGYFENDVCLEGLRLFFMMREFFVDPDLMTMTSVISACEA 308

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     G+++H + I+TG   +V V  SL+ M++     G  D++  VF +M   +++SW
Sbjct: 309 LGDERLGREVHGYVIKTGFVAEVSVNNSLIQMHSSV---GCWDEAEMVFSKMEFKDLVSW 365

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL--LDSNVAEQVYTH 413
           TA+I+GY ++G  +K AV+ ++ M    V P+  T ASVL AC  L  LD  +   ++  
Sbjct: 366 TAMISGYEKNGLPEK-AVETYTIMEHEGVVPDEITIASVLSACAGLGLLDKGI--MLHEF 422

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           A + G      V NSLI MY++   ++ A + F  +  KN++S+ +++     N  S +A
Sbjct: 423 ADRTGLTSYVIVANSLIDMYSKCRCIDKALEVFHRIPNKNVISWTSIILGLRLNYRSFEA 482

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
                ++    +  ++ T  S+LS  + IGA+  G++IHA  +++G   +  + NAL+ M
Sbjct: 483 LFFFQQM-ILSLKPNSVTLVSVLSACARIGALSCGKEIHAHALRTGLGFDGFLPNALLDM 541

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y RC  +E A+  F   E ++V SW  ++TG+A+ G    A+E+F+KM+   + P+ IT+
Sbjct: 542 YVRCGRMEPAWNQFNSCE-KDVASWNILLTGYAQQGKGGLAVELFHKMIESDVNPDEITF 600

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            ++L ACS +G++++G ++F SM  +  I   ++HYA +VDLLGR+G L +A EFI+ MP
Sbjct: 601 TSLLCACSRSGMVTDGLEYFESMEHKFHIAPNLKHYASVVDLLGRAGRLEDAYEFIKKMP 660

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           +  D  +W   L ACR++ + ELG+ AA+ I E D +    +ILL NLYA +G W+ VA 
Sbjct: 661 IDPDPAIWGALLNACRIYQNVELGELAAQHIFEMDTKSVGYYILLCNLYADSGKWDEVAR 720

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +RK M+E  L  + GCSW+E   +VH F  G+  HP+  EI A L+    K++  G    
Sbjct: 721 VRKIMRENRLTVDPGCSWVEVAGQVHAFLTGDDFHPQIKEINAVLEGFYEKMEATGLSMS 780

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +    ++ +  K +    HSE++A+AFGLI+T    PI V KNL +C +CH  +K+IS 
Sbjct: 781 KDSRRDDI-DASKAEIFCGHSERLAIAFGLINTVPGTPIWVTKNLYMCENCHNTVKFISK 839

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCND 859
           V  R I +RD+ +FHH KDG CSC D
Sbjct: 840 VVRRGISVRDTEQFHHFKDGVCSCGD 865


>gi|302793246|ref|XP_002978388.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
 gi|300153737|gb|EFJ20374.1| hypothetical protein SELMODRAFT_108652 [Selaginella moellendorffii]
          Length = 687

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 267/696 (38%), Positives = 413/696 (59%), Gaps = 14/696 (2%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           ML  G   N   F  V+ +  + + +  G  I+  + +  +   DV V  AL++ + K G
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEH-SLDVFVNTALVNTYTKCG 59

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  L  A KVFD M  ++   W  MI+  +      +A  +F  M   G   DR T   +
Sbjct: 60  S--LTDARKVFDGMPCRSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSI 117

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + AC   E    GK +      T   LD+ VG +L+ MYA+C    S +++ +VF RM  
Sbjct: 118 LDACVNPENLQHGKHVRESISETSFELDLFVGTALITMYARCR---SPENAAQVFGRMKQ 174

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            N+++W+AIIT +   G    EA++ F  M Q  + PN  TF S+L   G    S + E 
Sbjct: 175 KNLITWSAIITAFADHG-HCGEALRYFRMMQQEGILPNRVTFISLLN--GFTTPSGLEEL 231

Query: 410 VYTHAVKRGRALDDC--VGNSLISMYAR--SGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
              H +     LDD   + N+L+++Y R  +G ++ A    + + E+ + ++N +++ Y 
Sbjct: 232 SRIHLLITEHGLDDTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYT 291

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
            +  S +A E    ++   +     TF S+L+  +S  ++ +G+ IH+  ++ G +S+  
Sbjct: 292 LHGRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVI 351

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + NAL +MYS+C ++E A ++F  M  R+ +SW  M+  +A+HG +   L++  KM  +G
Sbjct: 352 VKNALTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEG 411

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +K NGIT+++VLS+CSHAGLI+EG ++F S+  + GI  + EHY C+VDLLGR+G L EA
Sbjct: 412 VKLNGITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEA 471

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
            ++I  MP   +++ W + LGACRVH D + GK AA  +LE DP + +A ++LSN+Y+  
Sbjct: 472 EKYISKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLELDPGNSSASVVLSNIYSER 531

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W+  A +R+ M  R + K  G S I+  NKVH+F V +TSHP+  EIY ++++L   +
Sbjct: 532 GDWKNAAKLRRAMASRRVKKVPGISSIQVKNKVHEFRVRDTSHPRAAEIYDKVEELCFAM 591

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           +E GY+PDT  VLH+++EEQK   L  HSEK+A+AFGLIST +   + +FKNLRVC DCH
Sbjct: 592 REAGYVPDTKMVLHDVDEEQKESLLAYHSEKLAIAFGLISTPEKSSLHIFKNLRVCEDCH 651

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           TA K+IS +TGREIV+RD++RFHH +DG CSC DYW
Sbjct: 652 TATKFISKITGREIVVRDNHRFHHFRDGSCSCKDYW 687



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 148/532 (27%), Positives = 264/532 (49%), Gaps = 9/532 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G   ++ T+  +L S +       GK +HS +  S+   +  +  +L++ Y+KCG 
Sbjct: 1   MLLEGVKANVITFLNVLNSVVDPDALRKGKFIHSCVRESEHSLDVFVNTALVNTYTKCGS 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L +A K+F  M   R + +W+SMIS+Y    +  +A  +F  M   G   +   F +++ 
Sbjct: 61  LTDARKVFDGMPC-RSVGTWNSMISAYSISERSGEAFFIFQRMQHEGERCDRVTFLSILD 119

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC N EN+  G  +   + +   F+ D+ VG ALI M+ +     E+A +VF +M +KN 
Sbjct: 120 ACVNPENLQHGKHVRESISETS-FELDLFVGTALITMYARCR-SPENAAQVFGRMKQKNL 177

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           + W+ +IT     G   +A+R F  M   G LP+R T   +++  +         ++H  
Sbjct: 178 ITWSAIITAFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLL 237

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
               GL     +  +LV++Y +C   G +D +  +   M +  + +W  +I GY    GR
Sbjct: 238 ITEHGLDDTTTMSNALVNVYGRCET-GELDVAEVILQEMDEQQITAWNVLINGYTLH-GR 295

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            +EA++ +  +    +  +  TF SVL AC +       + ++++AV+ G   D  V N+
Sbjct: 296 SREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNA 355

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L +MY++ G ME+AR+ F+S+  ++ VS+N M+ AYA++  SE+  +L+ ++E  GV  +
Sbjct: 356 LTNMYSKCGSMENARRIFDSMPIRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGVKLN 415

Query: 489 AYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             TF S+LS  S  G I +G Q  H+     G E     Y  L+ +  R   ++ A +  
Sbjct: 416 GITFVSVLSSCSHAGLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYI 475

Query: 548 KEM-EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            +M  +  +++W S++     H    R      K+L   + P   +   VLS
Sbjct: 476 SKMPSEPEIVTWASLLGACRVHKDLDRGKLAARKLLE--LDPGNSSASVVLS 525



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 215/435 (49%), Gaps = 16/435 (3%)

Query: 36  FIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F   P  S    N +I  Y +++ R  +A F    M  +G   D  T+  +L +C+   N
Sbjct: 68  FDGMPCRSVGTWNSMISAYSISE-RSGEAFFIFQRMQHEGERCDRVTFLSILDACVNPEN 126

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
              GK V   ++ +  E +  +  +LI++Y++C     A ++F  M  K ++++WS++I+
Sbjct: 127 LQHGKHVRESISETSFELDLFVGTALITMYARCRSPENAAQVFGRMKQK-NLITWSAIIT 185

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           ++ + G   +A+  F  M + G  PN   F +++   +    +     I+  + + G  D
Sbjct: 186 AFADHGHCGEALRYFRMMQQEGILPNRVTFISLLNGFTTPSGLEELSRIHLLITEHG-LD 244

Query: 214 SDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
               +  AL++++ +    +L+ A  +  +M E+    W ++I   T  G  R+A+  + 
Sbjct: 245 DTTTMSNALVNVYGRCETGELDVAEVILQEMDEQQITAWNVLINGYTLHGRSREALETYQ 304

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            + L     D+ T   V++AC+       GK +HS A+  GL  DV V  +L +MY+KC 
Sbjct: 305 RLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVKNALTNMYSKC- 363

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             GS++++R++FD M   + +SW  ++  Y Q  G  +E +KL   M Q  V  N  TF 
Sbjct: 364 --GSMENARRIFDSMPIRSAVSWNGMLQAYAQH-GESEEVLKLIRKMEQEGVKLNGITFV 420

Query: 393 SVLKACGNLLDSNVAEQV-YTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL 449
           SVL +C +     +AE   Y H++   R ++    +   L+ +  R+G++++A K    +
Sbjct: 421 SVLSSCSHA--GLIAEGCQYFHSLGHDRGIEVKTEHYGCLVDLLGRAGKLQEAEKYISKM 478

Query: 450 -FEKNLVSYNTMVDA 463
             E  +V++ +++ A
Sbjct: 479 PSEPEIVTWASLLGA 493



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 23/213 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR ++A+ T   +  +    D  T+  +L +C  S +   GK++HS      L+ + ++ 
Sbjct: 294 GRSREALETYQRLQLEAIPVDKVTFISVLNACTSSTSLAEGKMIHSNAVECGLDSDVIVK 353

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L ++YSKCG +  A +IF SM   R  VSW+ M+ +Y   G+  + + +  +M + G 
Sbjct: 354 NALTNMYSKCGSMENARRIFDSMP-IRSAVSWNGMLQAYAQHGESEEVLKLIRKMEQEGV 412

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-----DSDVCV-----GCALIDMF 226
             N   F +V+ +CS+   +A G         C YF     D  + V     GC L+D+ 
Sbjct: 413 KLNGITFVSVLSSCSHAGLIAEG---------CQYFHSLGHDRGIEVKTEHYGC-LVDLL 462

Query: 227 VKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
            +    L+ A K   KM +E   V W  ++  C
Sbjct: 463 GRAG-KLQEAEKYISKMPSEPEIVTWASLLGAC 494


>gi|302790389|ref|XP_002976962.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
 gi|300155440|gb|EFJ22072.1| hypothetical protein SELMODRAFT_106096 [Selaginella moellendorffii]
          Length = 1108

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 282/812 (34%), Positives = 453/812 (55%), Gaps = 23/812 (2%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVI 115
            GR   A+     +  +G  P+  T   +L +   S  +F   +  H  +  S    + VI
Sbjct: 313  GRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARGFHGRIWESGYLRDVVI 372

Query: 116  LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             N++IS+Y+KCG  + A  +F+ +  K D++SW++M+ +  +R      ++ F  ML  G
Sbjct: 373  GNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAG 432

Query: 176  FCPNEYCFSAVIRACSNTENVAIGHIIYGFLL--KCGYFDSDVCVGCALIDMFVK-GSVD 232
              PN+  F A++ ACSN+E +  G  I+  +L  +  Y +S V     L+ M+ K GS+ 
Sbjct: 433  IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT--MLVSMYGKCGSIS 490

Query: 233  LESAYKVFDKMT--EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
               A  VF +M    ++ V W +M+    Q    ++A    ++M+  G LPD  + + V+
Sbjct: 491  --EAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVL 548

Query: 291  SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            S+C      +   Q+    I        C+  +L+ M+ +C     ++ +R VF+ M   
Sbjct: 549  SSC----YCSQEAQVLRMCILESGYRSACLETALISMHGRCR---ELEQARSVFNEMDHG 601

Query: 351  NVMSWTAIITGYVQSGGRD-KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWTA+++   ++  RD KE   LF  M    V P+ FT A+ L  C       + + 
Sbjct: 602  DVVSWTAMVSATAEN--RDFKEVHNLFRRMQLEGVIPDKFTLATTLDTCLASTTLGLGKV 659

Query: 410  VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
            ++    + G   D  V N+L++MY+  G   +A   FE++  ++LVS+N M  AYA+   
Sbjct: 660  IHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGL 719

Query: 470  SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            +++A  L  +++  GV     TF++ L+ +     +  G+  HA   +SG +S+  +   
Sbjct: 720  AKEAVLLFRQMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHALAAESGLDSDVSVATG 779

Query: 530  LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            L+ +Y++C  ++ A  +F+   D  V+   ++I   A+HGF+  A+++F+KM  +G++P+
Sbjct: 780  LVKLYAKCGKLDEAMSLFRGACDWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPD 839

Query: 590  GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
              T ++++SAC HAG++ EG   F +M +  GI   +EHYAC VDLLGR+G L  A + I
Sbjct: 840  VATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQII 899

Query: 650  RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            R MP   + LVW + LG C++ GD ELG+  A+ ILE DP + AAH++LSN+Y + G W+
Sbjct: 900  RKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWK 959

Query: 710  YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
                 RK+M + N+    G SW E   +VH+F  G+ SHPKT EIY  LD+L L ++  G
Sbjct: 960  DADVDRKKMLDENVKNAPGMSWFEIGKQVHEFVAGDRSHPKTDEIYVVLDKLELLMRRAG 1019

Query: 770  YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
            Y  D      ++E+E K + L  HSE+IA+AFGLI+T     +++ KNLRVCGDCHTA K
Sbjct: 1020 YEADKGL---DVEDELKEKALGYHSERIAIAFGLIATPPETTLKIVKNLRVCGDCHTATK 1076

Query: 830  YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            YISMV GREI++RDS RFHH  +G CSC D W
Sbjct: 1077 YISMVMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 203/723 (28%), Positives = 338/723 (46%), Gaps = 70/723 (9%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +  G + + + +L    +     DL  Y+ LL+SC+ S +   GK  H L+  + LE + 
Sbjct: 1   MKRGSIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKHAHELIANAGLEQHL 60

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-L 172
            + N LI++Y +CG L EA+ IF  M  +R++VSW+++IS+    G    A  +F  M L
Sbjct: 61  FLGNCLINMYVRCGSLEEAHAIFSKM-EERNVVSWTALISANAQCGAFARAFALFRTMLL 119

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC---VGCALIDMFVK- 228
           E    PN Y   A++ AC+N+ ++AIG  I+  + + G   +      VG A+I+M+ K 
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERASTTATLVGNAMINMYAKC 179

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR----DAIRLFLDMILSGFLPDRF 284
           GS  LE A  VF  + EK+ V WT M     Q    R    DA+R+F +M+L    P+  
Sbjct: 180 GS--LEDAIAVFLAIPEKDVVSWTAMAGAYAQ---ERRFYPDALRIFREMLLQPLAPNVI 234

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T    + AC+ L     G  LHS      L  D     +L++MY KC   G  + +  VF
Sbjct: 235 TFITALGACTSLR---DGTWLHSLLHEASLGFDPLASNALINMYGKC---GDWEGAYSVF 288

Query: 345 DRMLDH---NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA-CGN 400
             M      +++SW A+I+  V++ GR  +A+ +F  +    + PN  T  ++L A   +
Sbjct: 289 KAMASRQELDLVSWNAMISASVEA-GRHGDAMAIFRRLRLEGMRPNSVTLITILNALAAS 347

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNT 459
            +D   A   +    + G   D  +GN++ISMYA+ G    A   F  +  K +++S+NT
Sbjct: 348 GVDFGAARGFHGRIWESGYLRDVVIGNAIISMYAKCGFFSAAWAVFRRIRWKCDVISWNT 407

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII--- 516
           M+ A     +  K     H +   G+  +  +F ++L+  S+  A+  G +IH+ I+   
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEM--EDRNVISWTSMITGFAKHGFAARA 574
           +   ES+  +   L+SMY +C ++  A  VFKEM    R++++W  M+  +A++  +  A
Sbjct: 468 RDYVESS--VATMLVSMYGKCGSISEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEA 525

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACS--------HAGLISEGWK-------------HF 613
                +ML  G+ P+ +++ +VLS+C            ++  G++               
Sbjct: 526 FGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRC 585

Query: 614 RSMYDEHGIVQRMEH-----YACMVDLLGRSGSLTEALEFIRSMPLSA---DVLVWRTFL 665
           R +     +   M+H     +  MV     +    E     R M L     D     T L
Sbjct: 586 RELEQARSVFNEMDHGDVVSWTAMVSATAENRDFKEVHNLFRRMQLEGVIPDKFTLATTL 645

Query: 666 GACRVHGDTELGK--HA--AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
             C       LGK  HA   E+ LE    D A    L N+Y++ G W    +  + MK R
Sbjct: 646 DTCLASTTLGLGKVIHACVTEIGLE---ADIAVENALLNMYSNCGDWREALSFFETMKAR 702

Query: 722 NLI 724
           +L+
Sbjct: 703 DLV 705



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 175/349 (50%), Gaps = 12/349 (3%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y  ND R ++A   L  M Q G  PD  +++ +L SC  S+     +++   +  S    
Sbjct: 516 YAQND-RSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE---AQVLRMCILESGYR- 570

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++ +  +LIS++ +C +L +A  +F  M +  D+VSW++M+S+        +  ++F  M
Sbjct: 571 SACLETALISMHGRCRELEQARSVFNEM-DHGDVVSWTAMVSATAENRDFKEVHNLFRRM 629

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+++  +  +  C  +  + +G +I+  + + G  ++D+ V  AL++M+     
Sbjct: 630 QLEGVIPDKFTLATTLDTCLASTTLGLGKVIHACVTEIG-LEADIAVENALLNMYSNCG- 687

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A   F+ M  ++ V W +M     Q G  ++A+ LF  M L G  PD+ T S  ++
Sbjct: 688 DWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRQMQLEGVKPDKLTFSTTLN 747

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
                 L + GK  H+ A  +GL  DV V   LV +YAKC   G +D++  +F    D  
Sbjct: 748 VSGGSALVSDGKLFHALAAESGLDSDVSVATGLVKLYAKC---GKLDEAMSLFRGACDWT 804

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           V+   AII    Q  G  +EAVK+F  M Q  V P+  T  S++ ACG+
Sbjct: 805 VVLLNAIIGALAQH-GFSEEAVKMFWKMQQEGVRPDVATLVSIISACGH 852


>gi|147801369|emb|CAN74731.1| hypothetical protein VITISV_037837 [Vitis vinifera]
          Length = 719

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 291/791 (36%), Positives = 432/791 (54%), Gaps = 86/791 (10%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L  +  LLK+CI  R+   GK +HSL  +S + P++   N  I LYSKCG L  A K F+
Sbjct: 8   LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            + +                                    PN + F+A+I A +      
Sbjct: 68  DISD------------------------------------PNVFSFNAIIAAYAKESRPL 91

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           I H                                     ++FD++ E + V +  +I+ 
Sbjct: 92  IAH-------------------------------------QLFDQIPEPDLVSYNTLISA 114

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
               G    A+ LF  M   G   D FTLS V++AC + ++   G QLHS A+ +G    
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCD-DVGLIG-QLHSVAVSSGFDSY 172

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLF 376
           V V  +L+  Y K   +G +DD+++VF  M    + +SW ++I  Y Q     K A+ LF
Sbjct: 173 VSVNNALLTYYGK---NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK-ALGLF 228

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR- 435
            +M++  +  + FT ASVL A   L D +   Q +   +K G   +  VG+ LI +Y++ 
Sbjct: 229 QEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKC 288

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS-EKAFELLHEIEDTGVGTSAYTFAS 494
            G M D RK FE + E +LV +NTMV  Y++N    E A E   +++  G   +  +F  
Sbjct: 289 GGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVC 348

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNH-CIYNALISMYSRCANVEAAFQVFKEMEDR 553
           ++S  S++ +  +G+QIH+  +KS   SN   + NALI+MYS+C N++ A ++F  M + 
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           N +S  SMI G+A+HG    +L +F  ML   I P  IT+I+VLSAC+H G + EGW +F
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYF 468

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M ++  I    EHY+CM+DLLGR+G L+EA   I  MP +   + W + LGACR HG+
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            EL   AA  +L+ +P + A +++LSN+YASAG WE VA +RK M++R + K+ GCSWIE
Sbjct: 529 IELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIE 588

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE---QKVQYL 790
              ++H F   ++SHP   EIY  L++++ K+K  GY+PD  + L + +     +K   L
Sbjct: 589 VKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRL 648

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
             HSEK+AVAFGLIST   +P+ V KNLR+CGDCH AIK+IS + GREI +RD++RFH  
Sbjct: 649 GHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCF 708

Query: 851 KDGKCSCNDYW 861
           K+G+CSC DYW
Sbjct: 709 KEGQCSCGDYW 719



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 247/516 (47%), Gaps = 54/516 (10%)

Query: 48  NRLIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N LI    D G    A+     M + G   D  T S ++ +C       +G+L HS+   
Sbjct: 109 NTLISAYADCGETAPALGLFSGMREMGLDMDXFTLSAVITACCDDVGL-IGQL-HSVAVS 166

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S  +    + N+L++ Y K GDL++A ++F  MG  RD VSW+SMI +Y    +   A+ 
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F EM+  G   + +  ++V+ A +  E+++ G   +G L+K G F  +  VG  LID++
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLY 285

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ-LGCPRDAIRLFLDMILSGFLPDRFT 285
            K    +    KVF+++TE + V W  M++  +Q      DA+  F  M   G+ P+  +
Sbjct: 286 SKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCS 345

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSVDDSRKVF 344
              V+SACS L   + GKQ+HS A+++ +  + + V  +L+ MY+KC   G++ D+R++F
Sbjct: 346 FVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC---GNLQDARRLF 402

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           DRM +HN +S  ++I GY Q  G + E++ LF  M++ Q+AP   TF SVL AC      
Sbjct: 403 DRMAEHNTVSLNSMIAGYAQH-GIEMESLHLFQWMLERQIAPTSITFISVLSAC------ 455

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNT 459
                                        A +GR+E+    F  + EK  +      Y+ 
Sbjct: 456 -----------------------------AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+D   +     +A  L+  +        +  +ASLL    + G I    +   ++++  
Sbjct: 487 MIDLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE 543

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
             SN   Y  L +MY+     E    V K M DR V
Sbjct: 544 -PSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578


>gi|296088738|emb|CBI38188.3| unnamed protein product [Vitis vinifera]
          Length = 744

 Score =  502 bits (1292), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 268/714 (37%), Positives = 424/714 (59%), Gaps = 37/714 (5%)

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N + ++  ++ C   +  + G  ++  +LK G    D+     L++M+VK    L  A K
Sbjct: 37  NSHAYANALQDCIQKDEPSRGKGLHCEILKRGGC-LDLFAWNILLNMYVKSDF-LCDASK 94

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FD+M E+NT+ +  +I    +     +AI LF+ +   G   + F  + ++      + 
Sbjct: 95  LFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDC 154

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G  +H+   + G   +  VG +L+D Y+ C   G VD +R+VFD +L  +++SWT +
Sbjct: 155 GELGWGIHACIFKLGHESNAFVGTALIDAYSVC---GRVDVAREVFDGILYKDMVSWTGM 211

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           +T + ++    KEA+KLFS M      PN+FTFASV KAC  L   +V + V+  A+K  
Sbjct: 212 VTCFAENDCF-KEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSR 270

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
             LD  VG +L+ +Y +SG ++DAR+AFE + +K+++ ++ M+  YA++  S++A E+  
Sbjct: 271 YELDLYVGVALLDLYTKSGDIDDARRAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFF 330

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++    V  + +TFAS+L   +++  +  G QIH  +IK G  S+  + NAL+ +Y++C 
Sbjct: 331 QMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCG 390

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML---------------- 582
            +E + ++F E   RN ++W ++I G  + G   +AL +F  ML                
Sbjct: 391 RMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALR 450

Query: 583 ---------------ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
                          +  +KP+ +T++ VLSAC++AGL+ +G  +F SM  +HGI   +E
Sbjct: 451 ACASLAALEPGLQIHSLTVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIE 510

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HY CMV LLGR G L +A++ I  +P    V+VWR  LGAC +H D ELG+ +A+ +LE 
Sbjct: 511 HYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACVIHNDIELGRISAQRVLEM 570

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           +PQD A H+LLSN+YA+A  W+ VA++RK MK + + KE G SWIE+   VH F VG+TS
Sbjct: 571 EPQDKATHVLLSNMYATAKRWDNVASVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTS 630

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS 807
           HP+   I   L+ L +K K+ GY+P+ N VL ++E+E+K + L+ HSE++A++FG+I T 
Sbjct: 631 HPEVRVINGMLEWLHMKTKKAGYIPNYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTP 690

Query: 808 KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              PIR+ KNLR+C DCH AIK IS V  REIV+RD NRFHH ++G CSC DYW
Sbjct: 691 SGSPIRIMKNLRICVDCHAAIKCISKVVQREIVVRDINRFHHFQEGLCSCGDYW 744



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/428 (28%), Positives = 233/428 (54%), Gaps = 16/428 (3%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R  +AI     + ++G+  +   ++ +LK  + +    LG  +H+ + +   E N+ +  
Sbjct: 119 RFLEAIELFVRLHREGHELNPFVFTTILKLLVSTDCGELGWGIHACIFKLGHESNAFVGT 178

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +LI  YS CG ++ A ++F  +  K D+VSW+ M++ +       +A+ +F +M  +GF 
Sbjct: 179 ALIDAYSVCGRVDVAREVFDGILYK-DMVSWTGMVTCFAENDCFKEALKLFSQMRMVGFK 237

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           PN + F++V +AC   E   +G  ++G  LK  Y + D+ VG AL+D++ K S D++ A 
Sbjct: 238 PNNFTFASVFKACLGLEAFDVGKSVHGCALKSRY-ELDLYVGVALLDLYTK-SGDIDDAR 295

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           + F+++ +K+ + W+ MI R  Q    ++A+ +F  M  +  LP++FT + V+ AC+ +E
Sbjct: 296 RAFEEIPKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATME 355

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G Q+H   I+ GL  DV V  +L+D+YAKC   G +++S ++F      N ++W  
Sbjct: 356 GLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKC---GRMENSMELFAESPHRNDVTWNT 412

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +I G+VQ G  +K A++LF +M++ +V     T++S L+AC +L       Q+++  VK 
Sbjct: 413 VIVGHVQLGDGEK-ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKP 471

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNLNSEK 472
               D      ++S  A +G ++  +  F S+ + + +      Y  MV    +  + +K
Sbjct: 472 ----DKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDK 527

Query: 473 AFELLHEI 480
           A +L+ EI
Sbjct: 528 AVKLIDEI 535



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 94/343 (27%), Positives = 175/343 (51%), Gaps = 17/343 (4%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++A+     M   G  P+  T++ + K+C+    F +GK VH    +S+ E +  +  +L
Sbjct: 222 KEALKLFSQMRMVGFKPNNFTFASVFKACLGLEAFDVGKSVHGCALKSRYELDLYVGVAL 281

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + LY+K GD+++A + F+ +  K+D++ WS MI+ Y    +  +A+ MF +M +    PN
Sbjct: 282 LDLYTKSGDIDDARRAFEEI-PKKDVIPWSFMIARYAQSDQSKEAVEMFFQMRQALVLPN 340

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           ++ F++V++AC+  E + +G+ I+  ++K G   SDV V  AL+D++ K    +E++ ++
Sbjct: 341 QFTFASVLQACATMEGLNLGNQIHCHVIKIG-LHSDVFVSNALMDVYAKCG-RMENSMEL 398

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F +   +N V W  +I    QLG    A+RLFL+M+         T S  + AC+ L   
Sbjct: 399 FAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 458

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNV---MSW 355
             G Q+HS  ++           + V + + C   G +D  +  F  M+ DH +   +  
Sbjct: 459 EPGLQIHSLTVKPD-------KLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEH 511

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
              +   +  GG   +AVKL  ++      P+   + ++L AC
Sbjct: 512 YTCMVWLLGRGGHLDKAVKLIDEI---PFQPSVMVWRALLGAC 551



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 83/164 (50%), Gaps = 1/164 (0%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P S  +  +    + ++A+     M Q    P+  T++ +L++C      +LG  +H  +
Sbjct: 308 PWSFMIARYAQSDQSKEAVEMFFQMRQALVLPNQFTFASVLQACATMEGLNLGNQIHCHV 367

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            +  L  +  + N+L+ +Y+KCG +  + ++F    ++ D V+W+++I  +V  G    A
Sbjct: 368 IKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRND-VTWNTVIVGHVQLGDGEKA 426

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           + +F+ MLE      E  +S+ +RAC++   +  G  I+   +K
Sbjct: 427 LRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVK 470


>gi|359497290|ref|XP_002268807.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Vitis vinifera]
          Length = 719

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 291/791 (36%), Positives = 432/791 (54%), Gaps = 86/791 (10%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L  +  LLK+CI  R+   GK +HSL  +S + P++   N  I LYSKCG L  A K F+
Sbjct: 8   LQRFRHLLKTCIAERDLSTGKSLHSLYIKSFIPPSTYFSNHFILLYSKCGRLAWARKAFQ 67

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            + +                                    PN + F+A+I A +      
Sbjct: 68  DISD------------------------------------PNVFSFNAIIAAYAKESRPL 91

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           I H                                     ++FD++ E + V +  +I+ 
Sbjct: 92  IAH-------------------------------------QLFDQIPEPDLVSYNTLISA 114

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
               G    A+ LF  M   G   D FTLS V++AC + ++   G QLHS A+ +G    
Sbjct: 115 YADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCD-DVGLIG-QLHSVAVSSGFDSY 172

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLF 376
           V V  +L+  Y K   +G +DD+++VF  M    + +SW ++I  Y Q     K A+ LF
Sbjct: 173 VSVNNALLTYYGK---NGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSK-ALGLF 228

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR- 435
            +M++  +  + FT ASVL A   L D +   Q +   +K G   +  VG+ LI +Y++ 
Sbjct: 229 QEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTGFHQNSHVGSGLIDLYSKC 288

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS-EKAFELLHEIEDTGVGTSAYTFAS 494
            G M D RK FE + E +LV +NTMV  Y++N    E A E   +++  G   +  +F  
Sbjct: 289 GGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCSFVC 348

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNH-CIYNALISMYSRCANVEAAFQVFKEMEDR 553
           ++S  S++ +  +G+QIH+  +KS   SN   + NALI+MYS+C N++ A ++F  M + 
Sbjct: 349 VISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKCGNLQDARRLFDRMAEH 408

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           N +S  SMI G+A+HG    +L +F  ML   I P  IT+I+VLSAC+H G + EGW +F
Sbjct: 409 NTVSLNSMIAGYAQHGIEMESLHLFQWMLERQIAPTSITFISVLSACAHTGRVEEGWNYF 468

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M ++  I    EHY+CM+DLLGR+G L+EA   I  MP +   + W + LGACR HG+
Sbjct: 469 NMMKEKFNIEPEAEHYSCMIDLLGRAGKLSEAENLIARMPFNPGSIGWASLLGACRTHGN 528

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            EL   AA  +L+ +P + A +++LSN+YASAG WE VA +RK M++R + K+ GCSWIE
Sbjct: 529 IELAVKAANQVLQLEPSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGVKKKPGCSWIE 588

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE---QKVQYL 790
              ++H F   ++SHP   EIY  L++++ K+K  GY+PD  + L + +     +K   L
Sbjct: 589 VKKRIHVFVAEDSSHPMIKEIYEFLEEMSGKMKRAGYVPDVRWALVKDDGTRGGEKEIRL 648

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
             HSEK+AVAFGLIST   +P+ V KNLR+CGDCH AIK+IS + GREI +RD++RFH  
Sbjct: 649 GHHSEKLAVAFGLISTKDGEPVLVVKNLRICGDCHNAIKFISAIAGREITVRDAHRFHCF 708

Query: 851 KDGKCSCNDYW 861
           K+G+CSC DYW
Sbjct: 709 KEGQCSCGDYW 719



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 150/516 (29%), Positives = 247/516 (47%), Gaps = 54/516 (10%)

Query: 48  NRLIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N LI    D G    A+     M + G   D  T S ++ +C       +G+L HS+   
Sbjct: 109 NTLISAYADCGETAPALGLFSGMREMGLDMDGFTLSAVITACCDDVGL-IGQL-HSVAVS 166

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S  +    + N+L++ Y K GDL++A ++F  MG  RD VSW+SMI +Y    +   A+ 
Sbjct: 167 SGFDSYVSVNNALLTYYGKNGDLDDAKRVFYGMGGIRDEVSWNSMIVAYGQHQEGSKALG 226

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F EM+  G   + +  ++V+ A +  E+++ G   +G L+K G F  +  VG  LID++
Sbjct: 227 LFQEMVRRGLNVDMFTLASVLTAFTCLEDLSGGLQFHGQLIKTG-FHQNSHVGSGLIDLY 285

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ-LGCPRDAIRLFLDMILSGFLPDRFT 285
            K    +    KVF+++TE + V W  M++  +Q      DA+  F  M   G+ P+  +
Sbjct: 286 SKCGGGMSDCRKVFEEITEPDLVLWNTMVSGYSQNEEFLEDALECFRQMQGIGYRPNDCS 345

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSVDDSRKVF 344
              V+SACS L   + GKQ+HS A+++ +  + + V  +L+ MY+KC   G++ D+R++F
Sbjct: 346 FVCVISACSNLSSPSQGKQIHSLALKSDIPSNRISVDNALIAMYSKC---GNLQDARRLF 402

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           DRM +HN +S  ++I GY Q  G + E++ LF  M++ Q+AP   TF SVL AC      
Sbjct: 403 DRMAEHNTVSLNSMIAGYAQH-GIEMESLHLFQWMLERQIAPTSITFISVLSAC------ 455

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNT 459
                                        A +GR+E+    F  + EK  +      Y+ 
Sbjct: 456 -----------------------------AHTGRVEEGWNYFNMMKEKFNIEPEAEHYSC 486

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+D   +     +A  L+  +        +  +ASLL    + G I    +   ++++  
Sbjct: 487 MIDLLGRAGKLSEAENLIARMP---FNPGSIGWASLLGACRTHGNIELAVKAANQVLQLE 543

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
             SN   Y  L +MY+     E    V K M DR V
Sbjct: 544 -PSNAAPYVVLSNMYASAGRWEEVATVRKFMRDRGV 578


>gi|357127388|ref|XP_003565363.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Brachypodium distachyon]
          Length = 814

 Score =  501 bits (1290), Expect = e-139,   Method: Compositional matrix adjust.
 Identities = 277/801 (34%), Positives = 453/801 (56%), Gaps = 19/801 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS--LLTRSKLEPNSVILNSLISLYSKC 126
           M + G  P     +LLL S I S     G+L  +  L  +     N+  LN ++S YS+ 
Sbjct: 25  MVKTGFDPATYRLNLLLHSLISS-----GRLAQARALFDQMPHRNNAFSLNRMLSGYSRS 79

Query: 127 GDLNEANKIF-KSMGNKRDIVSWSSMISSYVNR--GKQVDAIHMFVEMLELGFCPNEYCF 183
           G L+ A+ +F  S  + RD V+W+ MI ++ +    +  DA+ +F +ML  G  P+    
Sbjct: 80  GQLSAAHHLFLSSPPHLRDAVTWTVMIGAFASAPGARASDAVSLFRDMLREGVAPDRVTV 139

Query: 184 SAVIR---ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + V+    A   T    I   ++ F LK G   S+V V   L+D + K  + L +A +VF
Sbjct: 140 ATVLNLPPASGGTAAAIIIASLHPFALKLGLLHSNVVVCNTLLDAYCKHGL-LAAARRVF 198

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
            +M  +++V +  M+  C++ G   +A+ LF  M   G    RFT S V++  + +    
Sbjct: 199 QEMPHRDSVTYNAMMMGCSKEGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLC 258

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+Q+H    R   + +V V  SL+D Y+KC     +D+ +K+F  M++ + +S+  +I 
Sbjct: 259 LGRQVHGLVAR-ATSSNVFVNNSLLDFYSKCDC---LDEMKKLFHEMIERDNVSYNVMIA 314

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY  +       ++LF +M           +AS+L   G++    + +Q++   V  G +
Sbjct: 315 GYAWNRCASI-VLRLFREMQSLSFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLS 373

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +D VGN+LI MY++ G ++ A+  F +  +K  VS+  M+    +N   E+A +L   +
Sbjct: 374 SEDLVGNALIDMYSKCGMLDAAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGM 433

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              G+     TF+S +  +S++  IG G Q+H+ +I+SG  S+    +AL+ MY++C  +
Sbjct: 434 RRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKCGCL 493

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A Q F EM +RN ISW ++I+ +A +G A  A+++F  ML  G KP+ +T+++VLSAC
Sbjct: 494 DEALQTFDEMPERNSISWNAVISAYAHYGQAKNAIKMFEGMLCYGFKPDSVTFLSVLSAC 553

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SH GL  E  K+F  M  E+GI    EHY+C++D LGR G   +  E +  MP   D ++
Sbjct: 554 SHNGLAEECMKYFELMEYEYGISPWKEHYSCVIDTLGRVGRFDKVQEMLGEMPFEDDPII 613

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W + L +CR HG+ +L + AAE +      D   +++LSN++A AG WE  A ++K M++
Sbjct: 614 WSSILHSCRTHGNQDLARVAAEKLFSMGSTDATPYVILSNIFAKAGKWEDAAGVKKIMRD 673

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           R L KE G SW+E  +KV+ F   + ++P   EI  EL++L  ++ + GY PDT+  L +
Sbjct: 674 RGLRKETGYSWVEVKHKVYSFSSNDQTNPMITEIKDELERLYKEMDKQGYKPDTSCTLQQ 733

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           ++++ K++ L  HSE++A+AF LI+T    PIRV KNL  C DCH+AIK +S +  R+I+
Sbjct: 734 VDDDIKLESLKYHSERLAIAFALINTPPGTPIRVMKNLSACVDCHSAIKMMSKIVNRDII 793

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RDS+RFHH KDG CSC DYW
Sbjct: 794 VRDSSRFHHFKDGFCSCGDYW 814



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 136/428 (31%), Positives = 219/428 (51%), Gaps = 26/428 (6%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G   +A+     M +KG      T+S +L       +  LG+ VH L+ R+    N  +
Sbjct: 219 EGSHAEALDLFAAMRRKGLAATRFTFSTVLTVATGVGDLCLGRQVHGLVARAT-SSNVFV 277

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV-NRGKQVDAIHMFVEMLEL 174
            NSL+  YSKC  L+E  K+F  M  +RD VS++ MI+ Y  NR   +  + +F EM  L
Sbjct: 278 NNSLLDFYSKCDCLDEMKKLFHEM-IERDNVSYNVMIAGYAWNRCASI-VLRLFREMQSL 335

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
            F      +++++    +  ++ IG  I+  L+  G    D+ VG ALIDM+ K  + L+
Sbjct: 336 SFDRQALPYASLLSVAGSVPHIGIGKQIHAQLVLLGLSSEDL-VGNALIDMYSKCGM-LD 393

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           +A   F    +K  V WT MIT C Q G   +A++LF  M  +G  PDR T S  + A S
Sbjct: 394 AAKTNFINKNDKTGVSWTAMITGCVQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASS 453

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L +   G+QLHS+ IR+G    V  G +L+DMY KC   G +D++ + FD M + N +S
Sbjct: 454 NLAMIGLGRQLHSYLIRSGHMSSVFSGSALLDMYTKC---GCLDEALQTFDEMPERNSIS 510

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV---- 410
           W A+I+ Y    G+ K A+K+F  M+     P+  TF SVL AC +   + +AE+     
Sbjct: 511 WNAVISAYAHY-GQAKNAIKMFEGMLCYGFKPDSVTFLSVLSACSH---NGLAEECMKYF 566

Query: 411 ----YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF-ESLFEKNLVSYNTMVDAYA 465
               Y + +   +    CV ++L     R GR +  ++   E  FE + + +++++ +  
Sbjct: 567 ELMEYEYGISPWKEHYSCVIDTL----GRVGRFDKVQEMLGEMPFEDDPIIWSSILHSCR 622

Query: 466 KNLNSEKA 473
            + N + A
Sbjct: 623 THGNQDLA 630



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 47/139 (33%), Positives = 81/139 (58%), Gaps = 1/139 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G+ ++A+     M + G  PD  T+S  +K+        LG+ +HS L RS    + 
Sbjct: 418 VQNGQQEEALQLFCGMRRAGLSPDRATFSSTIKASSNLAMIGLGRQLHSYLIRSGHMSSV 477

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
              ++L+ +Y+KCG L+EA + F  M  +R+ +SW+++IS+Y + G+  +AI MF  ML 
Sbjct: 478 FSGSALLDMYTKCGCLDEALQTFDEM-PERNSISWNAVISAYAHYGQAKNAIKMFEGMLC 536

Query: 174 LGFCPNEYCFSAVIRACSN 192
            GF P+   F +V+ ACS+
Sbjct: 537 YGFKPDSVTFLSVLSACSH 555


>gi|115463097|ref|NP_001055148.1| Os05g0305300 [Oryza sativa Japonica Group]
 gi|113578699|dbj|BAF17062.1| Os05g0305300 [Oryza sativa Japonica Group]
          Length = 852

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 284/803 (35%), Positives = 449/803 (55%), Gaps = 67/803 (8%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           +++ Y  CG  + A  + + +      V W+ +I  ++ +G+   AI++   ML  G   
Sbjct: 57  VVASYLACGATDYALLVLERV-TPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAGTRL 115

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           + +    V++AC    +   G   +G L+ C  F+S+V +  AL+ M+ + GS  LE A 
Sbjct: 116 DHFTLPHVLKACGELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCGS--LEEAS 172

Query: 238 KVFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDMIL------SGFLPDRFTLSG 288
            +FD++T++   + + W  +++   +      A+ LF  M L      +    D  ++  
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++ AC  L+     K++H  AIR G  LDV VG +L+D YAKC   G ++++ KVF+ M 
Sbjct: 233 ILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKC---GLMENAVKVFNMME 289

Query: 349 DHNVMSWTAIITGYVQSG----------------------------------GRDKEAVK 374
             +V+SW A++ GY QSG                                  G   EA+ 
Sbjct: 290 FKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSHEALN 349

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR----------GRALDDC 424
           +F  MI     PN  T  SVL AC +L   +   +++ +++K           G   D  
Sbjct: 350 VFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGEDEDLM 409

Query: 425 VGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-- 480
           V N+LI MY++    + AR  F+   L E+N+V++  M+  +A+  +S  A +L  E+  
Sbjct: 410 VYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDALKLFVEMIS 469

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESN-HCIYNALISMYSRCA 538
           E  GV  +AYT + +L   + + AI  G+QIHA +++   ++S+ + + N LI+MYS+C 
Sbjct: 470 EPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCLINMYSKCG 529

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +V+ A  VF  M  ++ ISWTSM+TG+  HG  + AL+IF KM   G  P+ IT++ VL 
Sbjct: 530 DVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDDITFLVVLY 589

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSH G++ +G  +F SM  ++G+  R EHYA  +DLL R G L +A + ++ MP+    
Sbjct: 590 ACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVKDMPMEPTA 649

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           +VW   L ACRVH + EL +HA   ++E + ++  ++ L+SN+YA+AG W+ VA IR  M
Sbjct: 650 VVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKDVARIRHLM 709

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           K+  + K  GCSW++       F VG+ SHP + +IYA L+ L  +IK  GY+P+TNF L
Sbjct: 710 KKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGYVPETNFAL 769

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H+++EE+K   L +HSEK+A+A+GL++T    PIR+ KNLRVCGDCH+A  YIS +   E
Sbjct: 770 HDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTYISKIVDHE 829

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           IV+RD +RFHH K+G CSC  YW
Sbjct: 830 IVVRDPSRFHHFKNGSCSCGGYW 852



 Score =  213 bits (542), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 175/641 (27%), Positives = 304/641 (47%), Gaps = 83/641 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+  GR+  AI     M + G   D  T   +LK+C    ++  G   H L+  +  E N
Sbjct: 92  HIKQGRLDSAINVSCRMLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESN 151

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDAIHMFVE 170
             I N+L+++YS+CG L EA+ IF  +  +   D++SW+S++S++V       A+ +F +
Sbjct: 152 VFICNALVAMYSRCGSLEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSK 211

Query: 171 M-LELGFCP-NE----YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           M L +   P NE         ++ AC + + V     ++G  ++ G F  DV VG ALID
Sbjct: 212 MTLIVHEKPTNERSDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTF-LDVFVGNALID 270

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVG---------------------------------- 250
            + K  + +E+A KVF+ M  K+ V                                   
Sbjct: 271 AYAKCGL-MENAVKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMV 329

Query: 251 -WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            WT +I   +Q GC  +A+ +F  MI SG LP+  T+  V+SAC+ L  F+ G ++H+++
Sbjct: 330 TWTAVIAGYSQRGCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYS 389

Query: 310 IRTGLAL----------DVCVGCSLVDMYAKCTVDGSVDDSRKVFDR--MLDHNVMSWTA 357
           ++  L            D+ V  +L+DMY+KC    S   +R +FD   + + NV++WT 
Sbjct: 390 LKNCLLTLDNDFGGEDEDLMVYNALIDMYSKCR---SFKAARSIFDDIPLEERNVVTWTV 446

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           +I G+ Q G  + +A+KLF +MI     VAPN +T + +L AC +L    + +Q++ + V
Sbjct: 447 MIGGHAQYGDSN-DALKLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY-V 504

Query: 416 KRGRALDDC---VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            R    D     V N LI+MY++ G ++ AR  F+S+ +K+ +S+ +M+  Y  +    +
Sbjct: 505 LRHHQYDSSAYFVANCLINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSE 564

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALI 531
           A ++  ++   G      TF  +L   S  G + +G     +     G       Y   I
Sbjct: 565 ALDIFDKMRKAGFVPDDITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAI 624

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIK 587
            + +R   ++ A++  K+M  +   + W ++++    H     A  AL    +M A+   
Sbjct: 625 DLLARFGRLDKAWKTVKDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE--- 681

Query: 588 PNGITYIAVLSACSHAGLISEGWK---HFRSMYDEHGIVQR 625
            N  +Y  + +  + AG     WK     R +  + GI +R
Sbjct: 682 -NDGSYTLISNIYATAGR----WKDVARIRHLMKKSGIKKR 717



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 109/258 (42%), Gaps = 11/258 (4%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G  +++ Y   G  + A    E +     V +N ++  + K    + A  +   +   G
Sbjct: 53  LGTGVVASYLACGATDYALLVLERVTPSPAVWWNLLIREHIKQGRLDSAINVSCRMLRAG 112

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
                +T   +L     + +   G   H  I  +GFESN  I NAL++MYSRC ++E A 
Sbjct: 113 TRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGSLEEAS 172

Query: 545 QVFKEMEDR---NVISWTSMITGFAKHGFAARALEIFYKM-LADGIKPNG-----ITYIA 595
            +F E+  R   +VISW S+++   K   A  AL++F KM L    KP       I+ + 
Sbjct: 173 MIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDIISIVN 232

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L AC     + +  K        +G    +     ++D   + G +  A++    M   
Sbjct: 233 ILPACGSLKAVPQT-KEVHGNAIRNGTFLDVFVGNALIDAYAKCGLMENAVKVFNMMEFK 291

Query: 656 ADVLVWRTFLGACRVHGD 673
            DV+ W   +      G+
Sbjct: 292 -DVVSWNAMVAGYSQSGN 308


>gi|359495864|ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 265/682 (38%), Positives = 411/682 (60%), Gaps = 13/682 (1%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
           +S++I+ C   +++     I    LK G+  S   +G  LID ++K GSV    A KVFD
Sbjct: 80  YSSLIQQCIGIKSITDITKIQSHALKRGFHHS---LGNKLIDAYLKCGSVVY--ARKVFD 134

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           ++  ++ V W  MI    + G  ++AI ++  M+  G LPD FT S V  A S+L L   
Sbjct: 135 EVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 194

Query: 302 GKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           G++ H  ++  G+ + +V VG +LVDMYAK    G + D+R V D+++  +V+ +TA+I 
Sbjct: 195 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKF---GKMRDARLVSDQVVGKDVVLFTALIV 251

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY   G  D E++++F +M +  +  N +T +SVL  CGNL D      ++   VK G  
Sbjct: 252 GYSHHG-EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGLE 310

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  SL++MY R G ++D+ K F+     N V++ +++    +N   E A     ++
Sbjct: 311 SAVASQTSLLTMYYRCGLVDDSLKVFKQFINPNQVTWTSVIVGLVQNGREEIALLKFRQM 370

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
             + +  +++T +S+L   SS+  + +G+QIHA ++K G + +  +  ALI  Y +C + 
Sbjct: 371 LRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGST 430

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           E A  VF  + + +V+S  SMI  +A++GF   AL++F  M   G++PN +T++ VLSAC
Sbjct: 431 EIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSAC 490

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++AGL+ EG   F S  +   I    +HYACMVDLLGR+G L EA   I  + +S DV++
Sbjct: 491 NNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVI 549

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           WRT L ACR+HGD E+ K     +++  P+D   H+LLSNLYAS G+W  V  ++  M+E
Sbjct: 550 WRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMRE 609

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             L K    SW++ + ++H F  G+ SHP   +I  +L++L  K+KE GY+PDT FVL +
Sbjct: 610 MRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQD 669

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLI-STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           L+EE+K++ L+ HSEK+AVAF L  S  K+  IR+ KNLRVCGDCHT +K++S + GR+I
Sbjct: 670 LDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDI 729

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           + RD  RFHH ++G CSC DYW
Sbjct: 730 IARDVKRFHHFRNGLCSCGDYW 751



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 173/595 (29%), Positives = 299/595 (50%), Gaps = 25/595 (4%)

Query: 12  IPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQ 71
           +  P   +    SR    P+    FIA  T ++ L    +    + RV     +L   +Q
Sbjct: 4   VGTPQRLRREQESR--FSPAPVSMFIAD-TQADKLHGNNVLEREENRVSAFFKSLSHFSQ 60

Query: 72  KG----------NHPDLDTYSLLLKSCIRSRNF-HLGKLVHSLLTRSKLEPNSVILNSLI 120
                              YS L++ CI  ++   + K+    L R     +  + N LI
Sbjct: 61  SNIKIRKLCITETIQSTKLYSSLIQQCIGIKSITDITKIQSHALKRG---FHHSLGNKLI 117

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
             Y KCG +  A K+F  + + R IV+W+SMI+SY+  G+  +AI ++  M+  G  P+E
Sbjct: 118 DAYLKCGSVVYARKVFDEVPH-RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDE 176

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + FS+V +A S+   V  G   +G  +  G   S+V VG AL+DM+ K    +  A  V 
Sbjct: 177 FTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG-KMRDARLVS 235

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D++  K+ V +T +I   +  G   +++++F +M   G   + +TLS V+  C  LE  T
Sbjct: 236 DQVVGKDVVLFTALIVGYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLT 295

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           SG+ +H   ++ GL   V    SL+ MY +C   G VDDS KVF + ++ N ++WT++I 
Sbjct: 296 SGRLIHGLIVKAGLESAVASQTSLLTMYYRC---GLVDDSLKVFKQFINPNQVTWTSVIV 352

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G VQ+ GR++ A+  F  M++  + PN FT +SVL+AC +L      +Q++   +K G  
Sbjct: 353 GLVQN-GREEIALLKFRQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLD 411

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           +D  VG +LI  Y + G  E AR  F  L E ++VS N+M+ +YA+N    +A +L   +
Sbjct: 412 IDKYVGAALIDFYGKCGSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGM 471

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCAN 539
           +DTG+  +  T+  +LS  ++ G + +G  I +    SG  E     Y  ++ +  R   
Sbjct: 472 KDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGR 531

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++ A  +  ++   +V+ W ++++    HG    A  +  +++ D    +G T++
Sbjct: 532 LKEAEMLINQVNISDVVIWRTLLSACRIHGDVEMAKRVMNRVI-DLAPEDGGTHV 585


>gi|449481491|ref|XP_004156199.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g13880-like [Cucumis sativus]
          Length = 839

 Score =  500 bits (1288), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 284/790 (35%), Positives = 448/790 (56%), Gaps = 21/790 (2%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y  L++S  ++   + GKLVHS + ++   P   + N+L+++Y KCGD   A+K+F  M 
Sbjct: 62  YVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKCGDTRSADKLFDKM- 120

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
           +K +IV+++S+IS YV        + +F +   LG   ++Y  +  + ACS + N++ G 
Sbjct: 121 SKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGK 180

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
           +I+G +L  G   S V +  +LIDM+ K G VD   A  +FD   + + V W  +I    
Sbjct: 181 MIHGLILVYG-LGSQVVLTNSLIDMYSKCGQVDY--ARILFDHSDKLDGVSWNSLIAGYV 237

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE----LELFTSGKQLHSWAIRTGLA 315
           Q G   + + +   M  +G   + +TL   + ACS      ++F  G  LH  AI+ GL 
Sbjct: 238 QNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMF--GTMLHDHAIKLGLH 295

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG-RDK---E 371
           LDV VG +L+DMYAK    GS+DD+ ++FD+M+D NV+ + A++ G +Q     DK   +
Sbjct: 296 LDVVVGTALLDMYAK---TGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYK 352

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A+ LF +M    + P+ FT++S+LKAC  + D   A+QV+    K G   D+ +G+ LI 
Sbjct: 353 ALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILID 412

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           +Y+  G M DA   F S+    +V    M+  Y +N   E A  L +E+         + 
Sbjct: 413 LYSVLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFI 472

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            ++++S  +++G +  GEQI     K G        N+ I MY++  ++ AA   F++ME
Sbjct: 473 XSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQME 532

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           + +++SW++MI   A+HG A  AL  F  M + GI+PN   ++ VL ACSH GL+ EG +
Sbjct: 533 NPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEGLR 592

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           +F +M  ++ +   ++H  C+VDLLGR+G L +A   I  +    + ++WR  L ACR+H
Sbjct: 593 YFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFEHEPVMWRALLSACRIH 652

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            DT   +  A+ ++E +P   A+++LL N+Y  AG+    + +R  M+ER + KE G SW
Sbjct: 653 KDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVRTLMEERRIKKEPGLSW 712

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           I+  +KV+ F  G+ SH  + +IYA+LD++    K      D      E E    V Y  
Sbjct: 713 IQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDILGYKIEHEHLTNVNY-- 770

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSEK+AVAFG++  S+S P+RV KNLR+C DCH  +K  S+V  RE+++RDS RFHH K
Sbjct: 771 -HSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVEKRELIVRDSVRFHHFK 829

Query: 852 DGKCSCNDYW 861
           DG CSC DYW
Sbjct: 830 DGSCSCGDYW 839



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 147/476 (30%), Positives = 248/476 (52%), Gaps = 22/476 (4%)

Query: 47  SNRLIYH-LNDGRVQ-----KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
           SN + Y+ L  G VQ     K +   D   + G   D  T +  L +C +S N   GK++
Sbjct: 123 SNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYTCAGALTACSQSGNLSAGKMI 182

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           H L+    L    V+ NSLI +YSKCG ++ A  +F    +K D VSW+S+I+ YV  GK
Sbjct: 183 HGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDH-SDKLDGVSWNSLIAGYVQNGK 241

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN--VAIGHIIYGFLLKCGYFDSDVCV 218
             + + +  +M + G   N Y   + ++ACS+  N     G +++   +K G    DV V
Sbjct: 242 YEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDHAIKLG-LHLDVVV 300

Query: 219 GCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL-----GCPRDAIRLFL 272
           G AL+DM+ K GS+D   A ++FD+M +KN V +  M+    Q       C   A+ LF 
Sbjct: 301 GTALLDMYAKTGSLD--DAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDKCAYKALNLFF 358

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           +M   G  P  FT S ++ AC  +E F   KQ+H+   + GL  D  +G  L+D+Y   +
Sbjct: 359 EMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDEYIGSILIDLY---S 415

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
           V GS+ D+   F+ + +  ++  TA+I GY+Q+ G  + A+ LF +++  +  P+ F  +
Sbjct: 416 VLGSMMDALLCFNSIHNLTIVPMTAMIXGYLQN-GEFESALSLFYELLTYEEKPDEFIXS 474

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           +++ +C N+      EQ+  HA K G +      NS I MYA+SG +  A   F+ +   
Sbjct: 475 TIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENP 534

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           ++VS++TM+ + A++ ++ +A      ++  G+  + + F  +L   S  G + +G
Sbjct: 535 DIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIACSHRGLVEEG 590



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 195/380 (51%), Gaps = 18/380 (4%)

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           S FL +      +V + ++      GK +HS  I+T     + +  +L++MY KC   G 
Sbjct: 53  STFLLESVDYVKLVQSATKTGKLNHGKLVHSHMIKTSFRPCLFLQNNLLNMYCKC---GD 109

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
              + K+FD+M   N++++ ++I+GYVQ    DK  + LF    +  +  + +T A  L 
Sbjct: 110 TRSADKLFDKMSKSNIVTYNSLISGYVQMSNLDKVMI-LFDKARRLGLKLDKYTCAGALT 168

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC    + +  + ++   +  G      + NSLI MY++ G+++ AR  F+   + + VS
Sbjct: 169 ACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARILFDHSDKLDGVS 228

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS--IGAIGKGEQIHAR 514
           +N+++  Y +N   E+   +L ++   G+  + YT  S L   SS   G    G  +H  
Sbjct: 229 WNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMFGTMLHDH 288

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH-----G 569
            IK G   +  +  AL+ MY++  +++ A Q+F +M D+NV+ + +M+ G  +       
Sbjct: 289 AIKLGLHLDVVVGTALLDMYAKTGSLDDAIQIFDQMVDKNVVMYNAMMAGLLQQETIEDK 348

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD---EHGIVQRM 626
            A +AL +F++M + GIKP+  TY ++L AC    +I E +K  + ++    ++G++   
Sbjct: 349 CAYKALNLFFEMKSCGIKPSMFTYSSLLKAC----IIVEDFKFAKQVHALMCKNGLLSDE 404

Query: 627 EHYACMVDLLGRSGSLTEAL 646
              + ++DL    GS+ +AL
Sbjct: 405 YIGSILIDLYSVLGSMMDAL 424



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 91/314 (28%), Positives = 145/314 (46%), Gaps = 16/314 (5%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + D    KA+     M   G  P + TYS LLK+CI   +F   K VH+L+ ++ L  + 
Sbjct: 345 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 404

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I + LI LYS  G + +A   F S+ N   IV  ++MI  Y+  G+   A+ +F E+L 
Sbjct: 405 YIGSILIDLYSVLGSMMDALLCFNSIHN-LTIVPMTAMIXGYLQNGEFESALSLFYELLT 463

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
               P+E+  S ++ +C+N   +  G  I G   K G          + I M+ K S DL
Sbjct: 464 YEEKPDEFIXSTIMSSCANMGMLRSGEQIQGHATKVG-ISRFTIFQNSQIWMYAK-SGDL 521

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            +A   F +M   + V W+ MI    Q G   +A+R F  M   G  P+ F   GV+ AC
Sbjct: 522 YAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIAC 581

Query: 294 SELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM- 347
           S   L   G +        + ++  +   VCV    VD+  +    G + D+  +  R+ 
Sbjct: 582 SHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCV----VDLLGRA---GRLADAESLILRLG 634

Query: 348 LDHNVMSWTAIITG 361
            +H  + W A+++ 
Sbjct: 635 FEHEPVMWRALLSA 648



 Score = 72.8 bits (177), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 72/151 (47%), Gaps = 1/151 (0%)

Query: 42  TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH 101
           T  P++  +  +L +G  + A+     +      PD    S ++ SC        G+ + 
Sbjct: 434 TIVPMTAMIXGYLQNGEFESALSLFYELLTYEEKPDEFIXSTIMSSCANMGMLRSGEQIQ 493

Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQ 161
              T+  +   ++  NS I +Y+K GDL  AN  F+ M N  DIVSWS+MI S    G  
Sbjct: 494 GHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENP-DIVSWSTMICSNAQHGHA 552

Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
           ++A+  F  M   G  PN + F  V+ ACS+
Sbjct: 553 MEALRFFELMKSCGIEPNHFAFLGVLIACSH 583


>gi|302760085|ref|XP_002963465.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
 gi|300168733|gb|EFJ35336.1| hypothetical protein SELMODRAFT_79732 [Selaginella moellendorffii]
          Length = 829

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 270/796 (33%), Positives = 457/796 (57%), Gaps = 25/796 (3%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFKS 138
           TY+ LL+ C R++    G+ +HSL  +  L P ++IL N ++S+Y+ C    +A   F +
Sbjct: 45  TYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAHCDSPGDAKAAFDA 104

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           +  +R++ SW+ +++++   G+  + +     M + G  P+   F   + +C + E++  
Sbjct: 105 L-EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRD 163

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE-KNTVGWTLMIT 256
           G  I+  ++     + D  V  AL++M+ K GS  L  A +VF KM   +N + W++M  
Sbjct: 164 GIRIHQMVVD-SRLEIDPKVSNALLNMYKKCGS--LSHAKRVFAKMERTRNVISWSIMAG 220

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
                G   +A+R F  M+L G    +  +  ++SACS   L   G+ +HS    +G   
Sbjct: 221 AHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFES 280

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD--HNVMSWTAIITGYVQSGGRDKEAVK 374
           ++ V  +++ MY +C   G+V+++RKVFD M +   +V+SW  +++ YV +  R K+A++
Sbjct: 281 ELLVANAVMTMYGRC---GAVEEARKVFDAMDEALRDVVSWNIMLSAYVHND-RGKDAIQ 336

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           L+  M   Q+  +  T+ S+L AC +  D  +   ++   V      +  VGN+L+SMYA
Sbjct: 337 LYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYA 393

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA---FELLHEIEDTG----VGT 487
           + G   +AR  F+ + +++++S+ T++ AY +     +A   F+ + E+E  G    V  
Sbjct: 394 KCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKP 453

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
            A  F ++L+  + + A+ +G+ +  +    G  S+  +  A++++Y +C  +E   ++F
Sbjct: 454 DALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIF 513

Query: 548 KEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
             +  R +V  W +MI  +A+ G +  AL++F++M  +G++P+  +++++L ACSH GL 
Sbjct: 514 DGVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLE 573

Query: 607 SEGWKHFRSMYDEHGIVQR-MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
            +G  +F SM  E+  V R ++H+ C+ DLLGR G L EA EF+  +P+  D + W + L
Sbjct: 574 DQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLL 633

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
            ACR H D +  K  A  +L  +P+    ++ LSN+YA    W  VA +RK M E+ + K
Sbjct: 634 AACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKWHAVAKVRKFMAEQGVKK 693

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
           E G S IE    +H F  G+ +HP+  EI  EL +L  ++KE GY+PDT  VLH ++E++
Sbjct: 694 ERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKECGYVPDTKMVLHFVDEQE 753

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           K + LF HSE++A+A GLIST    P+RV KNLRVC DCHTA K IS + GR+IV+RD  
Sbjct: 754 KERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTATKLISKIAGRKIVVRDPT 813

Query: 846 RFHHIKDGKCSCNDYW 861
           RFH  KDGKCSC DYW
Sbjct: 814 RFHLFKDGKCSCQDYW 829



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 159/556 (28%), Positives = 278/556 (50%), Gaps = 26/556 (4%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++ +  L+ M Q G  PD  T+   L SC    +   G  +H ++  S+LE +  + 
Sbjct: 124 GQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVS 183

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+++Y KCG L+ A ++F  M   R+++SWS M  ++   G   +A+  F  ML LG 
Sbjct: 184 NALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGI 243

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
              +     ++ ACS+   V  G +I+  +   G F+S++ V  A++ M+ + G+V  E 
Sbjct: 244 KATKSAMVTILSACSSPALVQDGRLIHSCIALSG-FESELLVANAVMTMYGRCGAV--EE 300

Query: 236 AYKVFDKMTE--KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           A KVFD M E  ++ V W +M++        +DAI+L+  M L     D+ T   ++SAC
Sbjct: 301 ARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRMQLRA---DKVTYVSLLSAC 357

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S  E    G+ LH   +   L  +V VG +LV MYAKC   GS  ++R VFD+M   +++
Sbjct: 358 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC---GSHTEARAVFDKMEQRSII 414

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQ-------GQVAPNHFTFASVLKACGNLLDSNV 406
           SWT II+ YV+      EA  LF  M++        +V P+   F ++L AC ++     
Sbjct: 415 SWTTIISAYVRR-RLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQ 473

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-YNTMVDAYA 465
            + V   A   G + D  VG +++++Y + G +E+ R+ F+ +  +  V  +N M+  YA
Sbjct: 474 GKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEGRRIFDGVCSRPDVQLWNAMIAVYA 533

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +   S +A +L   +E  GV   +++F S+L   S  G   +G+     +          
Sbjct: 534 QFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRT 593

Query: 526 I--YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKML 582
           I  +  +  +  R   ++ A +  +++  + + ++WTS++     H    RA E+  K+L
Sbjct: 594 IQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLL 653

Query: 583 ADGIKPNGITYIAVLS 598
              ++P   T    LS
Sbjct: 654 R--LEPRCATGYVALS 667



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 222/440 (50%), Gaps = 21/440 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G V +A+     M   G          +L +C        G+L+HS +  S  E  
Sbjct: 222 HALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRLIHSCIALSGFESE 281

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
            ++ N+++++Y +CG + EA K+F +M    RD+VSW+ M+S+YV+  +  DAI ++  M
Sbjct: 282 LLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVHNDRGKDAIQLYQRM 341

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
                  ++  + +++ ACS+ E+V +G +++  ++     + +V VG AL+ M+ K   
Sbjct: 342 ---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVN-DELEKNVIVGNALVSMYAKCGS 397

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-------LSGFLPDRF 284
             E A  VFDKM +++ + WT +I+   +     +A  LF  M+            PD  
Sbjct: 398 HTE-ARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 456

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
               +++AC+++     GK +   A   GL+ D  VG ++V++Y KC   G +++ R++F
Sbjct: 457 AFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC---GEIEEGRRIF 513

Query: 345 DRMLDH-NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           D +    +V  W A+I  Y Q  G+  EA+KLF  M    V P+ F+F S+L AC +   
Sbjct: 514 DGVCSRPDVQLWNAMIAVYAQF-GQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGL 572

Query: 404 SNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTM 460
            +  +  +T      R +   + +   +  +  R GR+++A +  E L  + + V++ ++
Sbjct: 573 EDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSL 632

Query: 461 VDAYAKNLNSEKAFELLHEI 480
           + A   + + ++A E+ +++
Sbjct: 633 LAACRNHRDLKRAKEVANKL 652



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 201/400 (50%), Gaps = 13/400 (3%)

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAK 330
           LD+       +  T + ++  C+  +    G+++HS A++   L  ++ +G  +V MYA 
Sbjct: 32  LDLEKQAVRAENATYARLLQRCARAQALPEGRKIHSLAVKHNLLPGNLILGNHIVSMYAH 91

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G   D++  FD +   N+ SWT ++  +  S G+ KE ++    M Q  V P+  T
Sbjct: 92  CDSPG---DAKAAFDALEQRNLYSWTGLVAAFAIS-GQSKETLRALERMRQDGVRPDAVT 147

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F + L +CG+        +++   V     +D  V N+L++MY + G +  A++ F  + 
Sbjct: 148 FITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVSNALLNMYKKCGSLSHAKRVFAKME 207

Query: 451 E-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
             +N++S++ M  A+A + N  +A      +   G+  +     ++LS  SS   +  G 
Sbjct: 208 RTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGR 267

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED--RNVISWTSMITGFAK 567
            IH+ I  SGFES   + NA+++MY RC  VE A +VF  M++  R+V+SW  M++ +  
Sbjct: 268 LIHSCIALSGFESELLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSAYVH 327

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           +     A++++ +M    ++ + +TY+++LSACS A  +  G    + + ++  + + + 
Sbjct: 328 NDRGKDAIQLYQRM---QLRADKVTYVSLLSACSSAEDVGLGRVLHKQIVNDE-LEKNVI 383

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
               +V +  + GS TEA      M     ++ W T + A
Sbjct: 384 VGNALVSMYAKCGSHTEARAVFDKME-QRSIISWTTIISA 422


>gi|302801035|ref|XP_002982274.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
 gi|300149866|gb|EFJ16519.1| hypothetical protein SELMODRAFT_116224 [Selaginella moellendorffii]
          Length = 920

 Score =  500 bits (1287), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 287/785 (36%), Positives = 450/785 (57%), Gaps = 24/785 (3%)

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
           R+ +    ++VH  +  S LE +  +  +L+  Y KCG +  A ++F  +    D++ W+
Sbjct: 147 RAPSIAQARIVHDDIRGSDLERDLFVATALLDAYGKCGCVESALEVFSRI-QVPDLICWN 205

Query: 150 SMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           + I +     ++ D   + V  + L G  PN   F A++ +C +  ++ +   I+  + +
Sbjct: 206 AAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSSLPLARSIHARVEE 265

Query: 209 CGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
            G+   DV V  AL+ M+ + GSVD   +  VF+ M  +N V W  MI    Q G    A
Sbjct: 266 LGFL-GDVVVATALVTMYGRCGSVD--ESIAVFEAMAVRNHVSWNAMIAAFAQCGHRSAA 322

Query: 268 IRLFLDMILSGFLPDRFT-LSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
             ++  M   GF P++ T ++ + +ACS   +       LH W    GL  DV VG +LV
Sbjct: 323 FAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIACAGLEGDVMVGTALV 382

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
            MY      G++D +R  FD +   N++SW A++T Y    GR +EA++LF+ M +  +A
Sbjct: 383 TMYGST---GAIDRARAAFDAIPAKNIVSWNAMLTAY-GDNGRAREAMELFAAMKRQSLA 438

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR-ALDDCVGNSLISMYARSGRMEDARK 444
           PN  ++ +VL  C    D + A  ++   V  G  A +  + N ++ M+ARSG +E+A  
Sbjct: 439 PNKVSYLAVLGCCE---DVSEARSIHAEVVGNGLFAQESSIANGVVRMFARSGSLEEAVA 495

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
           AF++   K+ VS+NT V A +   +   A    + ++  G     +T  S++   + +G 
Sbjct: 496 AFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVSVVDVCADLGT 555

Query: 505 IGKGEQIHARIIKS-GFESNHCIYNALISMYSRC-ANVEAAFQVFKEMED--RNVISWTS 560
           +  G  I  ++  +   E +  + +A+++M ++C ++V+   ++F  M D  +++++W +
Sbjct: 556 LELGRSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFARMPDDRKDLVAWNT 615

Query: 561 MITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           MI  +A+HG   +AL++F  M     ++P+  T+++VLS CSHAGL+ +G   F    + 
Sbjct: 616 MIAAYAQHGHGRKALKLFRIMQQRSSVRPDSSTFVSVLSGCSHAGLVEDGIHCFFLAREV 675

Query: 620 HGIVQR-MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
            GI Q+ +EHYAC+VD+LGR G L EA +FIR MPL AD +VW + LGAC  +GD E G+
Sbjct: 676 LGIEQQPVEHYACLVDVLGRMGYLREAEDFIRKMPLPADSVVWTSLLGACSSYGDLEGGE 735

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA-GCSWIEADNK 737
            AA   +E    D   +++LSN+YA+AG WE    +R+ M ER + K   G S I   N+
Sbjct: 736 RAARAFIELYRSDSVGYVVLSNIYAAAGRWEDSIRVREDMAERRVKKRVPGKSSIVVKNR 795

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           VH+F   + SHP++  IYAEL++L   I+E GY+PDT  VLH++EEEQK Q L+ HSEK+
Sbjct: 796 VHEFFARDRSHPQSDAIYAELERLKGLIREAGYVPDTRLVLHDVEEEQKEQLLWYHSEKL 855

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCS 856
           A+AFGLIS      IRV KNLRVC DCHTA K+I+ VT REI +RD NRFHH  KDG+CS
Sbjct: 856 AIAFGLISVPHRHSIRVIKNLRVCKDCHTATKFIARVTQREIAVRDCNRFHHFGKDGECS 915

Query: 857 CNDYW 861
           C DYW
Sbjct: 916 CGDYW 920



 Score =  223 bits (567), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 161/623 (25%), Positives = 297/623 (47%), Gaps = 39/623 (6%)

Query: 74  NHPD---LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN 130
           +H D   ++T + LL+ CI   +   G+ +H  + +  L  N ++ N L+ +YSKC  L+
Sbjct: 17  DHDDYIPIETLAGLLRRCIGDADLAQGRQLHRQIVKQGLARNDLLGNYLVQMYSKCRSLD 76

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRA 189
           +AN  F ++   R I +W+++I++  +     D ++  +++ E     PN+    AV+ A
Sbjct: 77  DANAAFSAL-RSRGIATWNTLIAAQSSPAAVFD-LYTRMKLEERAENRPNKLTIIAVLGA 134

Query: 190 CSNTE----------NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
            ++ +          ++A   I++   ++    + D+ V  AL+D + K    +ESA +V
Sbjct: 135 IASGDPSSSSSSRAPSIAQARIVHDD-IRGSDLERDLFVATALLDAYGKCGC-VESALEV 192

Query: 240 FDKMTEKNTVGWTLMITRCT-QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           F ++   + + W   I  C      P  A+ L   M L G LP+R +   ++S+C +   
Sbjct: 193 FSRIQVPDLICWNAAIMACAGNDERPDRALLLVRRMWLEGLLPNRASFVAILSSCGDHSS 252

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
               + +H+     G   DV V  +LV MY +C   GSVD+S  VF+ M   N +SW A+
Sbjct: 253 LPLARSIHARVEELGFLGDVVVATALVTMYGRC---GSVDESIAVFEAMAVRNHVSWNAM 309

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA--VK 416
           I  + Q G R   A  ++  M Q    PN  TF + LKA  +    ++ E    H     
Sbjct: 310 IAAFAQCGHRSA-AFAIYWRMQQEGFRPNKITFVTALKAACSSSSQDLGESAALHGWIAC 368

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   D  VG +L++MY  +G ++ AR AF+++  KN+VS+N M+ AY  N  + +A EL
Sbjct: 369 AGLEGDVMVGTALVTMYGSTGAIDRARAAFDAIPAKNIVSWNAMLTAYGDNGRAREAMEL 428

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYS 535
              ++   +  +  ++ ++L        + +   IHA ++ +G F     I N ++ M++
Sbjct: 429 FAAMKRQSLAPNKVSYLAVLGCCED---VSEARSIHAEVVGNGLFAQESSIANGVVRMFA 485

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           R  ++E A   F     ++ +SW + +   +       A+  FY M  +G +P+  T ++
Sbjct: 486 RSGSLEEAVAAFDATVVKDSVSWNTKVAALSAREDLHGAITAFYTMQHEGFRPDKFTLVS 545

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH----YACMVDLLGRSGSLTEALE--FI 649
           V+  C+  G +  G    RS+  +      +E      + +++++ + GS  +  E  F 
Sbjct: 546 VVDVCADLGTLELG----RSIQQQLSAAIEVERDVVVASAVMNMVAKCGSSVDECERLFA 601

Query: 650 RSMPLSADVLVWRTFLGACRVHG 672
           R      D++ W T + A   HG
Sbjct: 602 RMPDDRKDLVAWNTMIAAYAQHG 624


>gi|242087005|ref|XP_002439335.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
 gi|241944620|gb|EES17765.1| hypothetical protein SORBIDRAFT_09g004560 [Sorghum bicolor]
          Length = 886

 Score =  499 bits (1285), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 282/822 (34%), Positives = 453/822 (55%), Gaps = 72/822 (8%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           L + S + P S +   +++ Y  CG  ++A  + + +      V W+ ++ +++  G+  
Sbjct: 74  LPSHSYVSPKS-LGTGVVASYLACGATSDALSVLERV-VPSPAVWWNLLVRAHIEEGRLD 131

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
            AI +   ML  G  P+ +     ++AC    +   G   +G L+ C  F+S+V V  AL
Sbjct: 132 RAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHG-LICCNGFESNVFVCNAL 190

Query: 223 IDMFVKGSVDLESAYKVFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDMIL--- 276
           + M+ + S  LE A  VFD++T K   + + W  ++    +   PR A+ LF +M     
Sbjct: 191 VAMYSR-SGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVH 249

Query: 277 ---SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
              +    D  ++  ++ AC+ L+     K++HS+AIR G   D  V  +L+D YAKC  
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTFADAFVCNALIDTYAKC-- 307

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--------------------------- 366
            GS+ D+  VF+ M   +V+SW A++TGY QSG                           
Sbjct: 308 -GSMKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKENIPLDVITWSAV 366

Query: 367 -------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
                  G  +EA+  F  MI     PN  T  S+L AC +L    +++ + THA    +
Sbjct: 367 IAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASL--GALSQGMETHAYSLKK 424

Query: 420 ALDD--------------CVGNSLISMYARSGRMEDARKAFESL--FEKNLVSYNTMVDA 463
            L                 V N+LI MY++    + AR  F S+   E+N+V++  M+  
Sbjct: 425 CLLSLDNDFGGDGDGEDLVVHNALIDMYSKCRSFKAARTIFNSIPRRERNVVTWTVMIGG 484

Query: 464 YAKNLNSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GF 520
           YA+  +S  A +L  E+  +   V  +AYT + +L   + + ++  G+QIHA + +   +
Sbjct: 485 YAQYGDSNDALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRMGKQIHAYVTRHHEY 544

Query: 521 ESN-HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           ES+ + + N LI MYS+C +V+ A  VF  M  RN +SWTSM++G+  HG    AL+IF 
Sbjct: 545 ESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFD 604

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           KM   G  P+ I+++ +L ACSH+G++ +G  +F  M  ++G++   +HYAC++DLL RS
Sbjct: 605 KMQKAGFVPDDISFLVLLYACSHSGMVDQGLDYFDIMRSDYGVIASAQHYACVIDLLARS 664

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L +A + I+ MP+     +W   L ACRVH + EL ++A   ++    ++  ++ L+S
Sbjct: 665 GRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALNKLVSMKAENDGSYTLIS 724

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA+A  W+ VA IR+ MK+  + K  GCSW++       F VG+ SHP + EIY+ L+
Sbjct: 725 NIYATARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLE 784

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L  +IK  GY+P+TNF LH++++E+K   L +HSEK+A+A+GL++TS   PIR+ KNLR
Sbjct: 785 RLIGRIKVMGYVPETNFALHDVDDEEKNNLLTEHSEKLALAYGLLTTSPGCPIRITKNLR 844

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VCGDCH+A  YIS +   EI++RDS+RFHH K+G CSC  YW
Sbjct: 845 VCGDCHSAFIYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 174/668 (26%), Positives = 311/668 (46%), Gaps = 99/668 (14%)

Query: 4   LSLPAP---AKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLS------------- 47
           LS PA      +PP  S    +P  ++L       ++A   TS+ LS             
Sbjct: 60  LSYPASLLSVSLPPLPSHSYVSP--KSLGTGVVASYLACGATSDALSVLERVVPSPAVWW 117

Query: 48  NRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N L+  H+ +GR+ +AI     M + G  PD  T    LK+C    ++  G   H L+  
Sbjct: 118 NLLVRAHIEEGRLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYRSGSAFHGLICC 177

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDA 164
           +  E N  + N+L+++YS+ G L +A+ +F  +  K   D++SW+S+++++V       A
Sbjct: 178 NGFESNVFVCNALVAMYSRSGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTA 237

Query: 165 IHMFVEMLELGF--CPNE----YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           + +F EM  +      NE         ++ AC++ + +     I+ + ++ G F +D  V
Sbjct: 238 LDLFSEMTTIVHEKATNERSDIISIVNILPACASLKALPQTKEIHSYAIRNGTF-ADAFV 296

Query: 219 GCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG--------------- 262
             ALID + K GS  ++ A  VF+ M  K+ V W  M+T  TQ G               
Sbjct: 297 CNALIDTYAKCGS--MKDAVNVFNVMEFKDVVSWNAMVTGYTQSGKFGAAFELFKNMRKE 354

Query: 263 -CPRD-------------------AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
             P D                   A+  F  MIL G  P+  T+  ++SAC+ L   + G
Sbjct: 355 NIPLDVITWSAVIAGYAQRGYGQEALDTFQQMILYGSEPNSVTIISLLSACASLGALSQG 414

Query: 303 KQLHSWAIRTGL------------ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--L 348
            + H+++++  L              D+ V  +L+DMY+KC    S   +R +F+ +   
Sbjct: 415 METHAYSLKKCLLSLDNDFGGDGDGEDLVVHNALIDMYSKCR---SFKAARTIFNSIPRR 471

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNV 406
           + NV++WT +I GY Q G  + +A+KLFS+MI     VAPN +T + +L AC +L    +
Sbjct: 472 ERNVVTWTVMIGGYAQYGDSN-DALKLFSEMISKPYAVAPNAYTISCILMACAHLSSLRM 530

Query: 407 AEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
            +Q++ +  +          V N LI MY++ G ++ AR  F+S+ ++N VS+ +M+  Y
Sbjct: 531 GKQIHAYVTRHHEYESSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGY 590

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF---- 520
             +   ++A ++  +++  G      +F  LL   S  G + +G   +  I++S +    
Sbjct: 591 GMHGRGKEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLD-YFDIMRSDYGVIA 649

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALE 576
            + H  Y  +I + +R   ++ A++  +EM  + +   W ++++    H     A  AL 
Sbjct: 650 SAQH--YACVIDLLARSGRLDKAWKTIQEMPMEPSAAIWVALLSACRVHSNVELAEYALN 707

Query: 577 IFYKMLAD 584
               M A+
Sbjct: 708 KLVSMKAE 715



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 136/333 (40%), Gaps = 45/333 (13%)

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG--------------------RALDD 423
           V+P HF  AS+LK C ++   N   Q++   +  G                         
Sbjct: 29  VSPTHF--ASLLKECRSV---NTVRQIHQKIIAYGLLSYPASLLSVSLPPLPSHSYVSPK 83

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            +G  +++ Y   G   DA    E +     V +N +V A+ +    ++A  +   +   
Sbjct: 84  SLGTGVVASYLACGATSDALSVLERVVPSPAVWWNLLVRAHIEEGRLDRAIGVSCRMLRA 143

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G     +T    L     + +   G   H  I  +GFESN  + NAL++MYSR  ++E A
Sbjct: 144 GTKPDHFTLPYALKACGELPSYRSGSAFHGLICCNGFESNVFVCNALVAMYSRSGSLEDA 203

Query: 544 FQVFKEMEDR---NVISWTSMITGFAKHGFAARALEIFYKML------ADGIKPNGITYI 594
             VF E+  +   +VISW S++    K      AL++F +M       A   + + I+ +
Sbjct: 204 SLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALDLFSEMTTIVHEKATNERSDIISIV 263

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC--MVDLLGRSGSLTEALEFIRSM 652
            +L AC+    + +  K   S    +G     + + C  ++D   + GS+ +A+     M
Sbjct: 264 NILPACASLKALPQT-KEIHSYAIRNGTFA--DAFVCNALIDTYAKCGSMKDAVNVFNVM 320

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
               DV+ W        V G T+ GK  A   L
Sbjct: 321 EFK-DVVSWNAM-----VTGYTQSGKFGAAFEL 347


>gi|15240583|ref|NP_196827.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181132|sp|Q9LYV3.1|PP377_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial; Flags: Precursor
 gi|7529278|emb|CAB86630.1| putative protein [Arabidopsis thaliana]
 gi|332004486|gb|AED91869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 822

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 295/824 (35%), Positives = 460/824 (55%), Gaps = 23/824 (2%)

Query: 47  SNRLIYHLNDGRVQKAIFT-----LDLMTQKGNHPDLDT--YSLLLKSCIRSRNFHLGKL 99
           + RL+   N  R+++  F+     LDL +     P LD+  Y  +L+ CI+  +    K 
Sbjct: 13  TRRLMIRCN--RIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKA 70

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  + +     +    N L++ Y K G   +A  +F  M  +R+ VS+ ++   Y  + 
Sbjct: 71  IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM-PERNNVSFVTLAQGYACQ- 128

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              D I ++  +   G   N + F++ ++   + +   I   ++  ++K GY DS+  VG
Sbjct: 129 ---DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGY-DSNAFVG 184

Query: 220 CALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
            ALI+ + V GSVD  SA  VF+ +  K+ V W  +++   + G   D+++L   M ++G
Sbjct: 185 AALINAYSVCGSVD--SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           F+P+ +T    + A   L  F   K +H   ++T   LD  VG  L+ +Y +    G + 
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL---GDMS 299

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           D+ KVF+ M  ++V+ W+ +I  + Q+G  + EAV LF  M +  V PN FT +S+L  C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCN-EAVDLFIRMREAFVVPNEFTLSSILNGC 358

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
                S + EQ++   VK G  LD  V N+LI +YA+  +M+ A K F  L  KN VS+N
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           T++  Y       KAF +  E     V  +  TF+S L   +S+ ++  G Q+H   IK+
Sbjct: 419 TVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT 478

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
                  + N+LI MY++C +++ A  VF EME  +V SW ++I+G++ HG   +AL I 
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
             M     KPNG+T++ VLS CS+AGLI +G + F SM  +HGI   +EHY CMV LLGR
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           SG L +A++ I  +P    V++WR  L A     + E  + +AE IL+ +P+D A ++L+
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLV 658

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SN+YA A  W  VA+IRK MKE  + KE G SWIE    VH F VG + HP    I   L
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGML 718

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP-IRVFKN 817
           + L +K    GY+PD N VL ++++E+K + L+ HSE++A+A+GL+    S+  I + KN
Sbjct: 719 EWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKN 778

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LR+C DCH+A+K IS +  R++V+RD NRFHH   G CSC D+W
Sbjct: 779 LRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822


>gi|413919600|gb|AFW59532.1| hypothetical protein ZEAMMB73_249815 [Zea mays]
          Length = 886

 Score =  498 bits (1281), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 281/820 (34%), Positives = 454/820 (55%), Gaps = 68/820 (8%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           L + S + P S +   +++ Y  CG   +A  + + +      V W+ ++  ++  G   
Sbjct: 74  LPSHSYVSPKS-LGTGVVASYLACGATKDALSVLERV-TPSPAVWWNLLVREHIKEGHLD 131

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
            AI +   ML  G  P+ +     ++AC    +   G  ++G L+ C  F+S+V V  AL
Sbjct: 132 RAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHG-LICCNGFESNVFVCNAL 190

Query: 223 IDMFVKGSVDLESAYKVFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDMIL--- 276
           + M+ +    LE A  VFD++T K   + + W  ++    +   PR A+ LF +M +   
Sbjct: 191 VAMYSRCG-SLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSEMSMIVH 249

Query: 277 ---SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
              +    D  ++  ++ AC+ L+     K++HS+AIR G   D  V  +L+D YAKC  
Sbjct: 250 EKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTFADAFVCNALIDTYAKC-- 307

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--------------------------- 366
            GS++D+ KVF+ M   +V+SW A++TGY QSG                           
Sbjct: 308 -GSMNDAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDVITWSAV 366

Query: 367 -------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR-- 417
                  G  +EA+  F  MI     PN  T  S+L AC +L   +   +++ +++K+  
Sbjct: 367 IAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAYSLKKCL 426

Query: 418 ----------GRALDDCVGNSLISMYARSGRMEDARKAFESL--FEKNLVSYNTMVDAYA 465
                     G   D  V N+LI MY++    + AR  F+S+   E+N+V++  M+  YA
Sbjct: 427 LSLDNDFGGDGDGEDLMVYNALIDMYSKCRSFKAARSIFDSIPRRERNVVTWTVMIGGYA 486

Query: 466 KNLNSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFE- 521
           +  +S  A ++  E+  +   V  +AYT + +L   + + A+  G+QIHA + +   +E 
Sbjct: 487 QYGDSNDALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHAYVTRHHEYEP 546

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           S + + N LI MYS+C +V+ A  VF  M  RN +SWTSM++G+  HG    AL+IF KM
Sbjct: 547 SVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRGKEALDIFDKM 606

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
              G  P+ I+++ +L ACSH+G++ +G  +F  M  ++ +V   EHYAC++DLL R G 
Sbjct: 607 QKAGFVPDDISFLVLLYACSHSGMVDQGLNYFDIMRRDYDVVASAEHYACVIDLLARCGR 666

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
           L +A + I+ MP+    ++W   L ACRVH + EL ++A   ++    ++  ++ L+SN+
Sbjct: 667 LDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMKAENDGSYTLISNI 726

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           YA+A  W+ VA IR+ MK+  + K  GCSW++       F VG+ SHP + EIY+ L++L
Sbjct: 727 YANARRWKDVARIRQLMKKSGIKKRPGCSWVQGKKGTASFFVGDRSHPLSPEIYSLLERL 786

Query: 762 ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVC 821
             +IK  GY+P+TNF LH++++E+K   L +HSEK+A+A+GL++TS   PIR+ KNLRVC
Sbjct: 787 IGRIKVMGYVPETNFALHDVDDEEKNNLLSEHSEKLALAYGLLTTSPGCPIRITKNLRVC 846

Query: 822 GDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GDCH+A  YIS +   EI++RDS+RFHH K+G CSC  YW
Sbjct: 847 GDCHSAFTYISKIVDHEIIVRDSSRFHHFKNGSCSCGGYW 886



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 158/602 (26%), Positives = 294/602 (48%), Gaps = 80/602 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+ +G + +AI     M + G  PD  T    LK+C    ++  G+ +H L+  +  E N
Sbjct: 124 HIKEGHLDRAIGVSCRMLRAGTKPDHFTLPYALKACGELPSYCCGRALHGLICCNGFESN 183

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDAIHMFVE 170
             + N+L+++YS+CG L +A+ +F  +  K   D++SW+S+++++V       A+ +F E
Sbjct: 184 VFVCNALVAMYSRCGSLEDASLVFDEITRKGIDDVISWNSIVAAHVKGSNPRTALELFSE 243

Query: 171 MLELGF--CPNE----YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           M  +      NE         ++ AC++ + +     I+ + ++ G F +D  V  ALID
Sbjct: 244 MSMIVHEKATNERSDIISIVNILPACASLKALPQIKEIHSYAIRNGTF-ADAFVCNALID 302

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT------------------------ 259
            + K GS++   A KVF+ M  K+ V W  M+T  T                        
Sbjct: 303 TYAKCGSMN--DAVKVFNVMEFKDVVSWNAMVTGYTQSGNFGAAFELFENMRKENIPLDV 360

Query: 260 -----------QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
                      Q GC ++A+  F  MIL G  P+  T+  ++SAC+ L   + G ++H++
Sbjct: 361 ITWSAVIAGYAQRGCSQEALDAFQQMILDGSEPNSVTIISLLSACASLGALSQGMEIHAY 420

Query: 309 AIRTGL------------ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LDHNVMS 354
           +++  L              D+ V  +L+DMY+KC    S   +R +FD +   + NV++
Sbjct: 421 SLKKCLLSLDNDFGGDGDGEDLMVYNALIDMYSKCR---SFKAARSIFDSIPRRERNVVT 477

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           WT +I GY Q G  + +A+K+FS+MI     VAPN +T + +L AC +L    + +Q++ 
Sbjct: 478 WTVMIGGYAQYGDSN-DALKIFSEMISKPYAVAPNAYTISCILMACAHLAALRMGKQIHA 536

Query: 413 HAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +  +          V N LI MY++ G ++ AR  F+S+ ++N VS+ +M+  Y  +   
Sbjct: 537 YVTRHHEYEPSVYFVANCLIDMYSKCGDVDTARNVFDSMPKRNEVSWTSMMSGYGMHGRG 596

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE----SNHCI 526
           ++A ++  +++  G      +F  LL   S  G + +G   +  I++  ++    + H  
Sbjct: 597 KEALDIFDKMQKAGFVPDDISFLVLLYACSHSGMVDQGLN-YFDIMRRDYDVVASAEH-- 653

Query: 527 YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKML 582
           Y  +I + +RC  ++ A++  +EM  + + + W ++++    H     A  AL     M 
Sbjct: 654 YACVIDLLARCGRLDKAWKTIQEMPMEPSAVIWVALLSACRVHSNVELAEYALNKLVNMK 713

Query: 583 AD 584
           A+
Sbjct: 714 AE 715


>gi|449480326|ref|XP_004155862.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g03580-like [Cucumis sativus]
          Length = 939

 Score =  497 bits (1280), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 285/818 (34%), Positives = 454/818 (55%), Gaps = 14/818 (1%)

Query: 29  PPSSSPPFIA-QPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK 86
           P SS   F +  PT +  L N +I  L ++G   +A+     M +K   PD  T+  ++ 
Sbjct: 70  PISSVSVFRSISPTNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVIN 129

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           SC R  +  LG +VH        E +  I N+LI +YS+  DL+ A  +F+ M N RD V
Sbjct: 130 SCARILDLELGCIVHEHAMEMGFESDLYIGNALIDMYSRFVDLDNARYVFEEMSN-RDSV 188

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW+S+IS Y + G   DA+ M+ +    G  P+ +  S+V+ AC +   V  G  ++G +
Sbjct: 189 SWNSLISGYCSNGFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVI 248

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
            K G    DV +G  L+ M+ K    L  A +VF KM  K++V W  MI    QLG    
Sbjct: 249 EKIG-IAGDVIIGNGLLSMYFKFE-RLREARRVFSKMAVKDSVTWNTMICGYAQLGRHEA 306

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           +++LF+DMI  GF+PD  +++  + AC +      GK +H + I +G   D      L+D
Sbjct: 307 SVKLFMDMI-DGFVPDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILID 365

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MYAKC   G +  +++VFD     + ++W ++I GY QSG   KE ++ F  M++ +  P
Sbjct: 366 MYAKC---GDLLAAQEVFDTTKCKDSVTWNSLINGYTQSGYY-KEGLESFK-MMKMERKP 420

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           +  TF  +L     L D N    ++   +K G   +  +GNSL+ +YA+ G M+D  K F
Sbjct: 421 DSVTFVLLLSIFSQLADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVF 480

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
             +   +++S+NT++ +     +    F++++E+   G+     T   +L   S +    
Sbjct: 481 SYMSAHDIISWNTVIASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRR 540

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G++IH  I KSGFESN  I NALI MYS+C ++E   +VFK M++++V++WT++I+ F 
Sbjct: 541 QGKEIHGYIFKSGFESNVPIGNALIEMYSKCGSLENCIKVFKYMKEKDVVTWTALISAFG 600

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            +G   +AL+ F  M   G+ P+ + +IA + ACSH+G++ EG + F  M  ++ +  RM
Sbjct: 601 MYGEGKKALKAFQDMELSGVLPDSVAFIAFIFACSHSGMVKEGLRFFDRMKTDYNLEPRM 660

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHYAC+VDLL RSG L +A EFI SMP+  D  +W   L ACR  G+T + +  ++ ILE
Sbjct: 661 EHYACVVDLLARSGLLAQAEEFILSMPMKPDASLWGALLSACRARGNTNIAQRVSKKILE 720

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            +  D   ++L+SN+YA+ G W+ V  +R  MK + L KE G SWIE   +V+ F  G+ 
Sbjct: 721 LNSDDTGYYVLVSNIYATLGKWDQVKTVRNSMKTKGLKKEPGSSWIEIQKRVYVFRTGDK 780

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           S  +  ++   L+ L   + + GY+ D  F LH++EE+ K   L  HSE++A+AFGL++T
Sbjct: 781 SFEQYDKVKDLLEYLVRLMAKEGYVADLQFALHDVEEDDKRDMLCGHSERLAIAFGLLNT 840

Query: 807 SKSKPIRVFKNLR--VCGDCHTAIKY-ISMVTGREIVL 841
               P+ +F  L    C   +  +KY I+M   R + L
Sbjct: 841 KPGSPLLIFPTLDDLSCWPMNQILKYSIAMQFSRTLPL 878



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 171/599 (28%), Positives = 311/599 (51%), Gaps = 13/599 (2%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           S LLK+   ++N    + VHSL+  S L  + +    LIS Y++  D   +  +F+S+  
Sbjct: 23  SSLLKTLSSAKNTPQLRTVHSLIITSGLSLSVIFSGKLISKYAQVKDPISSVSVFRSISP 82

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
             ++  W+S+I +  + G    A+  + EM E    P+ + F +VI +C+   ++ +G I
Sbjct: 83  TNNVYLWNSIIRALTHNGLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCI 142

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++   ++ G F+SD+ +G ALIDM+ +  VDL++A  VF++M+ +++V W  +I+     
Sbjct: 143 VHEHAMEMG-FESDLYIGNALIDMYSR-FVDLDNARYVFEEMSNRDSVSWNSLISGYCSN 200

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   DA+ ++    ++G +PD FT+S V+ AC  L     G  +H    + G+A DV +G
Sbjct: 201 GFWEDALDMYHKFRMTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIG 260

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
             L+ MY K      + ++R+VF +M   + ++W  +I GY Q  GR + +VKLF DMI 
Sbjct: 261 NGLLSMYFKFE---RLREARRVFSKMAVKDSVTWNTMICGYAQL-GRHEASVKLFMDMID 316

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
           G V P+  +  S ++ACG   D  V + V+ + +  G   D    N LI MYA+ G +  
Sbjct: 317 GFV-PDMLSITSTIRACGQSGDLQVGKFVHKYLIGSGFECDTVACNILIDMYAKCGDLLA 375

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A++ F++   K+ V++N++++ Y ++   ++  E    ++      S  TF  LLS  S 
Sbjct: 376 AQEVFDTTKCKDSVTWNSLINGYTQSGYYKEGLESFKMMKMERKPDSV-TFVLLLSIFSQ 434

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +  I +G  IH  +IK GFE+   I N+L+ +Y++C  ++   +VF  M   ++ISW ++
Sbjct: 435 LADINQGRGIHCDVIKFGFEAELIIGNSLLDVYAKCGEMDDLLKVFSYMSAHDIISWNTV 494

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I             ++  +M  +G+ P+  T + +L  CS   +  +G K       + G
Sbjct: 495 IASSVHFDDCTVGFQMINEMRTEGLMPDEATVLGILPMCSLLAVRRQG-KEIHGYIFKSG 553

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
               +     ++++  + GSL   ++  + M    DV+ W   + A  ++G+   GK A
Sbjct: 554 FESNVPIGNALIEMYSKCGSLENCIKVFKYMK-EKDVVTWTALISAFGMYGE---GKKA 608



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/404 (26%), Positives = 203/404 (50%), Gaps = 12/404 (2%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG 361
           + +HS  I +GL+L V     L+  YA+     S   S  VF  +   +NV  W +II  
Sbjct: 39  RTVHSLIITSGLSLSVIFSGKLISKYAQVKDPIS---SVSVFRSISPTNNVYLWNSIIRA 95

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
              + G   +A+  +++M + ++ P+ FTF SV+ +C  +LD  +   V+ HA++ G   
Sbjct: 96  LTHN-GLFTQALGYYTEMREKKLQPDAFTFPSVINSCARILDLELGCIVHEHAMEMGFES 154

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  +GN+LI MY+R   +++AR  FE +  ++ VS+N+++  Y  N   E A ++ H+  
Sbjct: 155 DLYIGNALIDMYSRFVDLDNARYVFEEMSNRDSVSWNSLISGYCSNGFWEDALDMYHKFR 214

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
            TG+    +T +S+L    S+ A+ +G  +H  I K G   +  I N L+SMY +   + 
Sbjct: 215 MTGMVPDCFTMSSVLLACGSLMAVKEGVAVHGVIEKIGIAGDVIIGNGLLSMYFKFERLR 274

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF +M  ++ ++W +MI G+A+ G    ++++F  M+ DG  P+ ++  + + AC 
Sbjct: 275 EARRVFSKMAVKDSVTWNTMICGYAQLGRHEASVKLFMDMI-DGFVPDMLSITSTIRACG 333

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYAC--MVDLLGRSGSLTEALEFIRSMPLSADVL 659
            +G +  G K         G     +  AC  ++D+  + G L  A E   +     D +
Sbjct: 334 QSGDLQVG-KFVHKYLIGSGF--ECDTVACNILIDMYAKCGDLLAAQEVFDTTK-CKDSV 389

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
            W + +      G  + G  + +M+  +   D    +LL ++++
Sbjct: 390 TWNSLINGYTQSGYYKEGLESFKMMKMERKPDSVTFVLLLSIFS 433


>gi|357516843|ref|XP_003628710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355522732|gb|AET03186.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 748

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 272/811 (33%), Positives = 442/811 (54%), Gaps = 104/811 (12%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y  LLK C  + NF   K +HS + ++   P + +LN+LIS                   
Sbjct: 12  YCALLKLCCETHNFTKAKNLHSHIIKTLPYPETFLLNNLIS------------------- 52

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
                        SY   G    A  +F +M      PN Y ++ ++ A S    V+   
Sbjct: 53  -------------SYAKLGSIPYACKVFDQMPH----PNLYSWNTILSAYSKLGRVS--- 92

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
                                            E  Y +FD M  ++ V W  +I+    
Sbjct: 93  ---------------------------------EMEY-LFDAMPRRDGVSWNSLISGYAG 118

Query: 261 LGCPRDAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            G    +++ +  M+ +   F  +R T S ++   S+      G+Q+H   ++ G    V
Sbjct: 119 CGLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYV 178

Query: 319 CVGCSLVDMYAK-----CTVD-----------------------GSVDDSRKVFDRMLDH 350
            VG  LVDMY+K     C                          G V+DS+++F  M + 
Sbjct: 179 FVGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRER 238

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + +SWT++ITG+ Q+G  D++A+ +F +M    +  + +TF SVL ACG ++     +QV
Sbjct: 239 DSISWTSMITGFTQNG-LDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQV 297

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + + ++     +  V ++L+ MY +   ++ A   F+ +  KN+VS+  M+  Y +N  S
Sbjct: 298 HAYIIRTDYKDNIFVASALVDMYCKCKNIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYS 357

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E+A +   +++  G+    +T  S++S  +++ ++ +G Q HAR + SG  S   + NAL
Sbjct: 358 EEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNAL 417

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           +++Y +C ++E + ++F E+  ++ ++WT++++G+A+ G A   + +F  MLA G+KP+ 
Sbjct: 418 VTLYGKCGSIEDSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDK 477

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T+I VLSACS AGL+ +G + F SM +EHGIV   +HY CM+DL  R+G + EA  FI 
Sbjct: 478 VTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEARNFIN 537

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
            MP S D + W T L +CR +G+ ++GK AAE ++E DP + A+++LLS++YA+ G WE 
Sbjct: 538 KMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPHNTASYVLLSSVYAAKGKWEE 597

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           VA +RK M+++ L KE GCSWI+  N+VH F   + S+P + +IY+EL++L  K+ + GY
Sbjct: 598 VARLRKDMRDKGLRKEPGCSWIKYKNQVHVFSADDKSNPFSDQIYSELEKLNYKMIKEGY 657

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +PD N VLH++ + +K++ L  HSEK+A+AFGL+      PIRV KNLRVC DCH A KY
Sbjct: 658 VPDMNSVLHDVGDSEKIKMLNHHSEKLAIAFGLLFIPPGLPIRVVKNLRVCSDCHNATKY 717

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS +T REI++RD+ RFH  KDG CSC D+W
Sbjct: 718 ISKITNREILVRDTARFHLFKDGTCSCGDFW 748



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 141/498 (28%), Positives = 244/498 (48%), Gaps = 51/498 (10%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLD--TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           G + +++   +LM +     +L+  T+S LL    +     LG+ +H  + +        
Sbjct: 120 GLIYQSVKAYNLMLKNDGSFNLNRITFSTLLILASKRGCVKLGRQIHGHVVKFGFMSYVF 179

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------RD 144
           + + L+ +YSK G ++ A K+F  +  K                              RD
Sbjct: 180 VGSPLVDMYSKMGMISCARKVFDELPEKNVVMYNTLIMGLMRCGRVEDSKRLFFEMRERD 239

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
            +SW+SMI+ +   G   DAI +F EM       ++Y F +V+ AC     +  G  ++ 
Sbjct: 240 SISWTSMITGFTQNGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHA 299

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
           ++++  Y D ++ V  AL+DM+ K   +++SA  VF KMT KN V WT M+    Q G  
Sbjct: 300 YIIRTDYKD-NIFVASALVDMYCKCK-NIKSAEAVFKKMTCKNVVSWTAMLVGYGQNGYS 357

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            +A++ F DM   G  PD FTL  V+S+C+ L     G Q H+ A+ +GL   + V  +L
Sbjct: 358 EEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLISFITVSNAL 417

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           V +Y KC   GS++DS ++F+ +   + ++WTA+++GY Q  G+  E + LF  M+   +
Sbjct: 418 VTLYGKC---GSIEDSHRLFNEISFKDEVTWTALVSGYAQF-GKANETIGLFESMLAHGL 473

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAV-KRGRALDDCVGNSLISMYARSGRMEDAR 443
            P+  TF  VL AC          Q++   + + G          +I +++R+GR+E+AR
Sbjct: 474 KPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRAGRIEEAR 533

Query: 444 KAFESL-FEKNLVSYNTMVDA--YAKNLNSEK-AFELLHEIEDTGVGTSAYTFASLLSGA 499
                + F  + +S+ T++ +  +  N++  K A E L E++     T++Y   S     
Sbjct: 534 NFINKMPFSPDAISWATLLSSCRFYGNMDIGKWAAEFLMELDPH--NTASYVLLS----- 586

Query: 500 SSIGAIGKGEQIHARIIK 517
           S   A GK E++ AR+ K
Sbjct: 587 SVYAAKGKWEEV-ARLRK 603



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/308 (26%), Positives = 157/308 (50%), Gaps = 10/308 (3%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  + AI     M  +    D  T+  +L +C        GK VH+ + R+  + N  +
Sbjct: 253 NGLDRDAIDIFREMKLENLQMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYKDNIFV 312

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++L+ +Y KC ++  A  +FK M  K ++VSW++M+  Y   G   +A+  F +M + G
Sbjct: 313 ASALVDMYCKCKNIKSAEAVFKKMTCK-NVVSWTAMLVGYGQNGYSEEAVKTFSDMQKYG 371

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P+++   +VI +C+N  ++  G   +   L  G   S + V  AL+ ++ K GS+  E
Sbjct: 372 IEPDDFTLGSVISSCANLASLEEGAQFHARALTSGLI-SFITVSNALVTLYGKCGSI--E 428

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            ++++F++++ K+ V WT +++   Q G   + I LF  M+  G  PD+ T  GV+SACS
Sbjct: 429 DSHRLFNEISFKDEVTWTALVSGYAQFGKANETIGLFESMLAHGLKPDKVTFIGVLSACS 488

Query: 295 ELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
              L   G Q+    I   G+         ++D++++    G ++++R   ++M    + 
Sbjct: 489 RAGLVEKGNQIFESMINEHGIVPIQDHYTCMIDLFSRA---GRIEEARNFINKMPFSPDA 545

Query: 353 MSWTAIIT 360
           +SW  +++
Sbjct: 546 ISWATLLS 553



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 57/218 (26%), Positives = 103/218 (47%), Gaps = 11/218 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ +  +G  ++A+ T   M + G  PD  T   ++ SC    +   G   H+    S L
Sbjct: 348 LVGYGQNGYSEEAVKTFSDMQKYGIEPDDFTLGSVISSCANLASLEEGAQFHARALTSGL 407

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                + N+L++LY KCG + +++++F  +  K D V+W++++S Y   GK  + I +F 
Sbjct: 408 ISFITVSNALVTLYGKCGSIEDSHRLFNEISFK-DEVTWTALVSGYAQFGKANETIGLFE 466

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK----CGYFDSDVCVGCALIDM 225
            ML  G  P++  F  V+ ACS    V  G+ I+  ++         D   C    +ID+
Sbjct: 467 SMLAHGLKPDKVTFIGVLSACSRAGLVEKGNQIFESMINEHGIVPIQDHYTC----MIDL 522

Query: 226 FVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLG 262
           F +    +E A    +KM    + + W  +++ C   G
Sbjct: 523 FSRAG-RIEEARNFINKMPFSPDAISWATLLSSCRFYG 559


>gi|357443809|ref|XP_003592182.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481230|gb|AES62433.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 912

 Score =  497 bits (1279), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 276/801 (34%), Positives = 448/801 (55%), Gaps = 21/801 (2%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+   D+M   G +P+  T S  L+SC     F  G  +H    +  LE N  +  SL+ 
Sbjct: 99  ALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAVKLGLEMNRFVGTSLVE 158

Query: 122 LYSKCGDLN-EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            Y+KCG  + EA K+   + +  D+VSW++M+SS V  GK  +A  ++V+M+E G  PNE
Sbjct: 159 FYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENGKWGEAFEIYVKMIESGVYPNE 218

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + F  ++ A S+   ++ G +++  L+  G  + ++ +  A++DM+ K    +  A KV 
Sbjct: 219 FTFVKLLGAVSSFLGLSYGKLLHAHLIMFGA-ELNLVLKTAVVDMYSKCR-RMVDAIKVS 276

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           +   E +   WT +I+  TQ    R+AI +F DM LSG LP+ FT S +++A S +    
Sbjct: 277 NLTPEYDVYLWTTLISGFTQNLQVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLD 336

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+Q HS  I  GL  D+ +G +LVDMY KC+      ++ KVF  +   NVM WT++I 
Sbjct: 337 LGEQFHSRVIIVGLEDDLYIGNALVDMYMKCS--HITTNAVKVFREITSPNVMCWTSLIA 394

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G+ +   R +++ +LF++M    V PN FT +++L AC           ++ H +K    
Sbjct: 395 GFAEK--RLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKVD 452

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           +D  V N+L+  YA  G +++A     ++  ++ ++Y  +     +  +   A ++L  +
Sbjct: 453 IDIAVANALVDTYAGVGMIDEAWSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHM 512

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
            + G+    ++ AS LS A+ +G +  G+Q+H   +KSGF+  H + N+L+ +YS+C ++
Sbjct: 513 CNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKCGSI 572

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A + FK++ + +  SW  +I+GF+ +G  + AL  F  M   G+KP+ IT ++++SAC
Sbjct: 573 HDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLSLISAC 632

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SH GL+  G ++F SM  E+ I  +++HY C+VDLLGR G L EA+  I  M    D L+
Sbjct: 633 SHGGLLELGLEYFHSMQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLI 692

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
            +T L AC +HG+  LG+  A   LE DP DPA ++LL+NLY +AG  ++    R+ M+E
Sbjct: 693 CKTLLNACNLHGNVALGEDMARRCLELDPSDPAIYLLLANLYDNAGLSDFGEKTRRLMRE 752

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           R L +  G  W+E  ++VH F  GE  +   +      ++L   I EF      N     
Sbjct: 753 RGLRRSPGQCWMEIRSRVHHFSAGEKINEDEIT-----EKLEFLITEF-----RNRRYQY 802

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
            E E K    F H E++AVAFG+++   + PIR++KN  +C  CHT I   + V GREI+
Sbjct: 803 QENEDK----FYHPEQLAVAFGVLNAPSTSPIRIYKNSLICSHCHTFIMLSTQVIGREII 858

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD  RFH  KDG+CSC D +
Sbjct: 859 MRDRKRFHFFKDGQCSCRDIF 879



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 148/540 (27%), Positives = 284/540 (52%), Gaps = 17/540 (3%)

Query: 80  TYSL--LLKSCIR------SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           T+SL    ++C+R      S +   G  +HS + +  L+ +  + N+L+SLY+K   ++ 
Sbjct: 8   TFSLSRFQETCLRVLSFCNSNSLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHR 67

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A  +F  M N RD+VSW++++SS+       DA+ +F  M+  G  PNE+  S+ +R+C 
Sbjct: 68  ARHLFDEMPN-RDVVSWTTILSSHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCF 126

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-KNTVG 250
                  G  I+   +K G  + +  VG +L++ + K       A+K+   + +  + V 
Sbjct: 127 ALGEFERGMQIHCSAVKLG-LEMNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVS 185

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           WT M++   + G   +A  +++ MI SG  P+ FT   ++ A S     + GK LH+  I
Sbjct: 186 WTTMLSSLVENGKWGEAFEIYVKMIESGVYPNEFTFVKLLGAVSSFLGLSYGKLLHAHLI 245

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
             G  L++ +  ++VDMY+KC     + D+ KV +   +++V  WT +I+G+ Q+  + +
Sbjct: 246 MFGAELNLVLKTAVVDMYSKCR---RMVDAIKVSNLTPEYDVYLWTTLISGFTQN-LQVR 301

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+ +F DM    + PN+FT++S+L A  ++L  ++ EQ ++  +  G   D  +GN+L+
Sbjct: 302 EAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGNALV 361

Query: 431 SMYARSGRM-EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
            MY +   +  +A K F  +   N++ + +++  +A+    E +F+L  E++  GV  ++
Sbjct: 362 DMYMKCSHITTNAVKVFREITSPNVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGVRPNS 420

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +T +++L   S   ++     +H  IIK+  + +  + NAL+  Y+    ++ A+ V   
Sbjct: 421 FTMSAILGACSKTRSLVPTMMLHGHIIKTKVDIDIAVANALVDTYAGVGMIDEAWSVIGT 480

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  R+ I++T +     + G    AL++   M  DGIK +  +  + LSA +  G +  G
Sbjct: 481 MNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGLGTMETG 540



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 214/412 (51%), Gaps = 17/412 (4%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           +V++AI     M   G  P+  TYS LL +     +  LG+  HS +    LE +  I N
Sbjct: 299 QVREAISVFRDMELSGLLPNNFTYSSLLNASSSILSLDLGEQFHSRVIIVGLEDDLYIGN 358

Query: 118 SLISLYSKCGDL-NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +L+ +Y KC  +   A K+F+ + +  +++ W+S+I+ +  + +  D+  +F EM   G 
Sbjct: 359 ALVDMYMKCSHITTNAVKVFREITSP-NVMCWTSLIAGFAEK-RLEDSFQLFAEMQAAGV 416

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN +  SA++ ACS T ++    +++G ++K    D D+ V  AL+D +  G   ++ A
Sbjct: 417 RPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTK-VDIDIAVANALVDTYA-GVGMIDEA 474

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           + V   M  ++++ +T +  R  Q G    A+++ + M   G   D F+L+  +SA + L
Sbjct: 475 WSVIGTMNLRDSITYTCLAARLNQKGHHGMALKVLIHMCNDGIKMDEFSLASFLSAAAGL 534

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
               +GKQLH +++++G      V  SLV +Y+KC   GS+ D+ + F  + + +  SW 
Sbjct: 535 GTMETGKQLHCYSVKSGFQRCHSVSNSLVHLYSKC---GSIHDANRAFKDISEPDAFSWN 591

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHA 414
            +I+G+  + G    A+  F DM    V P+  T  S++ AC  G LL+  +    Y H+
Sbjct: 592 GLISGFSWN-GLISHALSTFDDMRLAGVKPDSITLLSLISACSHGGLLELGLE---YFHS 647

Query: 415 VKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           +++   +   + +   L+ +  R GR+E+A    E + F+ + +   T+++A
Sbjct: 648 MQKEYHITPKLDHYMCLVDLLGRGGRLEEAMGVIEKMSFKPDSLICKTLLNA 699



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 71/304 (23%), Positives = 145/304 (47%), Gaps = 17/304 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           LI    + R++ +      M   G  P+  T S +L +C ++R+     ++H  + ++K+
Sbjct: 392 LIAGFAEKRLEDSFQLFAEMQAAGVRPNSFTMSAILGACSKTRSLVPTMMLHGHIIKTKV 451

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + +  + N+L+  Y+  G ++EA  +  +M N RD ++++ + +    +G    A+ + +
Sbjct: 452 DIDIAVANALVDTYAGVGMIDEAWSVIGTM-NLRDSITYTCLAARLNQKGHHGMALKVLI 510

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            M   G   +E+  ++ + A +    +  G  ++ + +K G F     V  +L+ ++ K 
Sbjct: 511 HMCNDGIKMDEFSLASFLSAAAGLGTMETGKQLHCYSVKSG-FQRCHSVSNSLVHLYSKC 569

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           GS+    A + F  ++E +   W  +I+  +  G    A+  F DM L+G  PD  TL  
Sbjct: 570 GSI--HDANRAFKDISEPDAFSWNGLISGFSWNGLISHALSTFDDMRLAGVKPDSITLLS 627

Query: 289 VVSACSELELFTSGKQ-LHS----WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           ++SACS   L   G +  HS    + I   L   +C    LVD+  +    G ++++  V
Sbjct: 628 LISACSHGGLLELGLEYFHSMQKEYHITPKLDHYMC----LVDLLGR---GGRLEEAMGV 680

Query: 344 FDRM 347
            ++M
Sbjct: 681 IEKM 684



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 46/170 (27%), Positives = 84/170 (49%), Gaps = 2/170 (1%)

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           ++ +G  IH+ IIK G + +  + N L+S+Y++   V  A  +F EM +R+V+SWT++++
Sbjct: 29  SLKEGICIHSPIIKLGLQHDLYLTNNLLSLYAKTFGVHRARHLFDEMPNRDVVSWTTILS 88

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
              K    + AL++F  M+  G  PN  T  + L +C   G    G +   S   + G+ 
Sbjct: 89  SHTKTKHHSDALQLFDMMIGSGEYPNEFTLSSALRSCFALGEFERGMQIHCSAV-KLGLE 147

Query: 624 QRMEHYACMVDLLGRSGSLT-EALEFIRSMPLSADVLVWRTFLGACRVHG 672
                   +V+   + G  + EA + +  +    DV+ W T L +   +G
Sbjct: 148 MNRFVGTSLVEFYTKCGCCSVEAWKLLSLVKDGGDVVSWTTMLSSLVENG 197


>gi|357508407|ref|XP_003624492.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355499507|gb|AES80710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1125

 Score =  496 bits (1277), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/798 (33%), Positives = 457/798 (57%), Gaps = 19/798 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE---------PNSVIL--NSLISLYS 124
           P L   + ++K+      +    LV S L R  L          P+  I   N++I  Y 
Sbjct: 84  PHLHVDASIIKTGFNPNTYRSNFLVKSFLQRGDLNGARKLFDEMPHKNIFSTNTMIMGYI 143

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           K G+L+EA  +F SM  +R  V+W+ +I  Y    +  +A  +F+EM   G  P+    +
Sbjct: 144 KSGNLSEARTLFDSMF-QRTAVTWTMLIGGYAQNNQFREAFGLFIEMGRHGIDPDHVSLA 202

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            ++   +  ++V     ++  ++K GY DS + V  +L+D + K +  L  A+++F+ + 
Sbjct: 203 TLLSGFTEFDSVNEVRQVHSHVIKLGY-DSTLVVSNSLLDSYCK-TRSLGLAFQLFNDIP 260

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           E+++V +  ++T  ++ G  R+AI LF  M   G+ P  FT + +++A  +L+    G+Q
Sbjct: 261 ERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQ 320

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H + ++     +V V  +L+D Y+K      V ++ K+F  M + + +S+  ++T Y  
Sbjct: 321 VHGFVVKCNFVWNVFVANALLDFYSK---HDRVVEASKLFYEMPEVDGISYNVLVTCYAW 377

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G R KE+++LF ++        +F FA++L      L+ ++  Q+++  +      +  
Sbjct: 378 NG-RVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAISEIL 436

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           VGNSL+ MYA+ G   +A + F  L  ++ V +  M+ +Y +    E   +L  E++   
Sbjct: 437 VGNSLVDMYAKCGEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAK 496

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +G  A T+AS++   +S+ ++  G+Q+H+ II SG+ SN    +AL+ MY++C +++ A 
Sbjct: 497 IGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKCGSIKDAL 556

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           Q+F+EM  RN +SW ++I+ +A++G     L +F +M+  G++P+ ++ +++L ACSH G
Sbjct: 557 QMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPDSVSLLSILCACSHCG 616

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+ EG ++F SM   + +V + EHYA  +D+L R G   EA + +  MP   D ++W + 
Sbjct: 617 LVEEGLQYFDSMTRIYKLVPKKEHYASTIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSV 676

Query: 665 LGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
           L +C +H + EL K AA  +      +D A ++ +SN+YA+AG W+ V  ++K M+ER +
Sbjct: 677 LNSCGIHKNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGKVKKAMRERGV 736

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K    SW+E  +K H F   + +HP+  EI  +LD+L  K+ + GY PD++  LH ++E
Sbjct: 737 KKVPAYSWVEIKHKTHVFTANDKTHPQMREIMKKLDELEEKMVKKGYKPDSSCALHNVDE 796

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E KV+ L  HSE+IA+AF LIST +  PI V KNLR C DCH AIK IS +  REI +RD
Sbjct: 797 EVKVESLKYHSERIAIAFALISTPEGSPILVMKNLRACTDCHAAIKVISKIVRREITVRD 856

Query: 844 SNRFHHIKDGKCSCNDYW 861
           S+RFHH +DG C+C DYW
Sbjct: 857 SSRFHHFRDGFCTCRDYW 874



 Score =  216 bits (551), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 270/504 (53%), Gaps = 13/504 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  PD  + + LL       + +  + VHS + +   +   V+ NSL+  Y K   
Sbjct: 189 MGRHGIDPDHVSLATLLSGFTEFDSVNEVRQVHSHVIKLGYDSTLVVSNSLLDSYCKTRS 248

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A ++F  +  +RD V+++++++ Y   G   +AI++F +M E+G+ P E+ F+A++ 
Sbjct: 249 LGLAFQLFNDIP-ERDSVTFNALLTGYSKEGFNREAINLFFKMQEVGYRPTEFTFAAILT 307

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           A    +++  G  ++GF++KC  F  +V V  AL+D + K    +E A K+F +M E + 
Sbjct: 308 AGIQLDDIEFGQQVHGFVVKCN-FVWNVFVANALLDFYSKHDRVVE-ASKLFYEMPEVDG 365

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           + + +++T     G  ++++ LF ++  +GF    F  + ++S  +       G+Q+HS 
Sbjct: 366 ISYNVLVTCYAWNGRVKESLELFKELQFTGFDRRNFPFATLLSIAAISLNLDIGRQIHSQ 425

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I T    ++ VG SLVDMYAKC   G   ++ ++F  +   + + WTA+I+ YVQ G  
Sbjct: 426 TIVTDAISEILVGNSLVDMYAKC---GEFGEANRIFSDLAIQSSVPWTAMISSYVQKGLH 482

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           + + +KLF +M + ++  +  T+AS+++AC +L    + +Q+++H +  G   +   G++
Sbjct: 483 E-DGLKLFVEMQRAKIGADAATYASIVRACASLASLTLGKQLHSHIIGSGYISNVFSGSA 541

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L+ MYA+ G ++DA + F+ +  +N VS+N ++ AYA+N + +    L  E+  +G+   
Sbjct: 542 LVDMYAKCGSIKDALQMFQEMPVRNSVSWNALISAYAQNGDGDCTLRLFEEMVRSGLQPD 601

Query: 489 AYTFASLLSGASSIGAIGKGEQIH---ARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
           + +  S+L   S  G + +G Q      RI K   +  H  Y + I M  R    + A +
Sbjct: 602 SVSLLSILCACSHCGLVEEGLQYFDSMTRIYKLVPKKEH--YASTIDMLCRGGRFDEAEK 659

Query: 546 VFKEME-DRNVISWTSMITGFAKH 568
           +  +M  + + I W+S++     H
Sbjct: 660 LMAQMPFEPDEIMWSSVLNSCGIH 683



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 237/463 (51%), Gaps = 24/463 (5%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++AI     M + G  P   T++ +L + I+  +   G+ VH  + +     N  +
Sbjct: 277 EGFNREAINLFFKMQEVGYRPTEFTFAAILTAGIQLDDIEFGQQVHGFVVKCNFVWNVFV 336

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+  YSK   + EA+K+F  M  + D +S++ +++ Y   G+  +++ +F E+   G
Sbjct: 337 ANALLDFYSKHDRVVEASKLFYEMP-EVDGISYNVLVTCYAWNGRVKESLELFKELQFTG 395

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           F    + F+ ++   + + N+ IG  I+   +      S++ VG +L+DM+ K   +   
Sbjct: 396 FDRRNFPFATLLSIAAISLNLDIGRQIHSQTIVTDAI-SEILVGNSLVDMYAKCG-EFGE 453

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++F  +  +++V WT MI+   Q G   D ++LF++M  +    D  T + +V AC+ 
Sbjct: 454 ANRIFSDLAIQSSVPWTAMISSYVQKGLHEDGLKLFVEMQRAKIGADAATYASIVRACAS 513

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L   T GKQLHS  I +G   +V  G +LVDMYAKC   GS+ D+ ++F  M   N +SW
Sbjct: 514 LASLTLGKQLHSHIIGSGYISNVFSGSALVDMYAKC---GSIKDALQMFQEMPVRNSVSW 570

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVA-----E 408
            A+I+ Y Q+G  D   ++LF +M++  + P+  +  S+L AC +  L++  +       
Sbjct: 571 NALISAYAQNGDGDC-TLRLFEEMVRSGLQPDSVSLLSILCACSHCGLVEEGLQYFDSMT 629

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN 467
           ++Y    K+          S I M  R GR ++A K    + FE + + +++++++   +
Sbjct: 630 RIYKLVPKKEHYA------STIDMLCRGGRFDEAEKLMAQMPFEPDEIMWSSVLNSCGIH 683

Query: 468 LNSEKAFELLHEIEDTGVGTSA---YTFASLLSGASSIGAIGK 507
            N E A +  +++ +  V   A    T +++ + A     +GK
Sbjct: 684 KNQELAKKAANQLFNMKVLRDAAPYVTMSNIYAAAGEWDNVGK 726


>gi|414873128|tpg|DAA51685.1| TPA: hypothetical protein ZEAMMB73_445170 [Zea mays]
          Length = 987

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 262/707 (37%), Positives = 415/707 (58%), Gaps = 71/707 (10%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           +L+ ++ K S  L  A+ VF +M +++ V WT+MI    + G   DA++ FLDM+  GF 
Sbjct: 286 SLLSLYAK-SGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDAVKTFLDMVSEGFA 344

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P +FTL+ V+S+C+ +E    G+++H + ++ GL+  V V  S++ MY KC   G  + +
Sbjct: 345 PSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYMYGKC---GDAETA 401

Query: 341 RKVFDRM-------------------------------LDHNVMSWTAIITGYVQSGGRD 369
           R VF+RM                               ++ +++SW  II GY Q+G  D
Sbjct: 402 RAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNG-LD 460

Query: 370 KEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
             A+K FS M+    + P+ FT  SVL AC NL    + +Q++++ ++ G      + N+
Sbjct: 461 GMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMNA 520

Query: 429 LISMYARSGRMEDARK-------------AFESLFE--------------------KNLV 455
           LIS YA+SG +E AR+             +F +L E                    ++++
Sbjct: 521 LISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDVI 580

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           ++  M+  Y +N  +++A EL   +   G   +++T A++LS  +S+  +  G+QIH + 
Sbjct: 581 AWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCKA 640

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARA 574
           I+S  E +  + NA+I++Y+R  +V  A +VF ++   +  I+WTSMI   A+HG   +A
Sbjct: 641 IRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHGLGEQA 700

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           + +F +M+  G+KP+ ITY+ VLSAC+HAG + +G +++  M +EHGIV +M HYACMVD
Sbjct: 701 VVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHYACMVD 760

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           L  R+G LTEA EFI+ MP++ D +VW + L ACRV  + +L + AA  +L  DP +  A
Sbjct: 761 LHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAACRVRKNADLAELAAGKLLSIDPHNSGA 820

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           +  L+N+Y++ G W   A I K  K++ + KE G SW     KVH F   +  HP+   I
Sbjct: 821 YSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWTHVRGKVHVFGADDVLHPQRDSI 880

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRV 814
           Y +  ++  +IK+ G++PD N VLH++++E K + L +HSEK+A+AFGLIST +   +R+
Sbjct: 881 YRKAAEMWEEIKKAGFVPDLNSVLHDVDDELKEELLSRHSEKLAIAFGLISTPEKTTLRI 940

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            KNLRVC DCHTAIK+IS    REI++RD+ RFHH +DG CSC DYW
Sbjct: 941 MKNLRVCNDCHTAIKFISKFVDREIIVRDATRFHHFRDGYCSCKDYW 987



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 260/518 (50%), Gaps = 69/518 (13%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N+   NSL+SLY+K G L +A+ +F  M + RD VSW+ MI      G+  DA+  F++M
Sbjct: 280 NAFTWNSLLSLYAKSGRLPDAHVVFAEMPD-RDAVSWTIMIVGLNRSGRFWDAVKTFLDM 338

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           +  GF P+++  + V+ +C+  E   +G  ++ F++K G   S V V  +++ M+ K   
Sbjct: 339 VSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLG-LSSCVPVANSVLYMYGKCG- 396

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM----------ILSGF-- 279
           D E+A  VF++M  ++   W +M++  T  G    A+ +F +M          I++G+  
Sbjct: 397 DAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQ 456

Query: 280 --------------------LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                                PD FT++ V+SAC+ L +   GKQ+HS+ +RTG+     
Sbjct: 457 NGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQ 516

Query: 320 VGCSLVDMYAKC-TVD-----------------------------GSVDDSRKVFDRMLD 349
           +  +L+  YAK  +V+                             G    +R++FD M +
Sbjct: 517 IMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNN 576

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V++WTA+I GY Q+G  D EA++LF  MI     PN  T A+VL AC +L   +  +Q
Sbjct: 577 RDVIAWTAMIVGYHQNGQND-EAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQ 635

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNL 468
           ++  A++  +     V N++I++YARSG +  AR+ F+ + + K  +++ +M+ A A++ 
Sbjct: 636 IHCKAIRSLQEQSVSVSNAIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQHG 695

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIY 527
             E+A  L  E+   GV     T+  +LS  +  G + KG++ + ++  + G       Y
Sbjct: 696 LGEQAVVLFEEMVRVGVKPDHITYVGVLSACAHAGFVDKGKRYYEQMQNEHGIVPQMSHY 755

Query: 528 NALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
             ++ +++R   +  A +  + M    + + W S++  
Sbjct: 756 ACMVDLHARAGLLTEAHEFIQRMPVAPDTVVWGSLLAA 793



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 147/586 (25%), Positives = 250/586 (42%), Gaps = 121/586 (20%)

Query: 50  LIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           +I  LN  GR   A+ T   M  +G  P   T + +L SC       +G+ VH  + +  
Sbjct: 318 MIVGLNRSGRFWDAVKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLG 377

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           L     + NS++ +Y KCGD   A  +F+ M   R + SW+ M+S Y ++G+   A+ MF
Sbjct: 378 LSSCVPVANSVLYMYGKCGDAETARAVFERM-QVRSVSSWNVMVSLYTHQGRMELAVSMF 436

Query: 169 VEMLELGFC--------------------------------PNEYCFSAVIRACSNTENV 196
             M+E                                    P+ +  ++V+ AC+N   +
Sbjct: 437 ENMVERSIVSWNTIIAGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRML 496

Query: 197 AIGHIIYGFLLKCGY--------------------------------FDSDVCVGCALID 224
            +G  ++ ++L+ G                                  D +V    AL++
Sbjct: 497 KMGKQMHSYILRTGMPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLE 556

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            +VK   D + A ++FD M  ++ + WT MI    Q G   +A+ LF  MIL G  P+  
Sbjct: 557 GYVKLG-DTKQAREIFDIMNNRDVIAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSH 615

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           TL+ V+SAC+ L     GKQ+H  AIR+     V V  +++ +YA+    GSV  +R+VF
Sbjct: 616 TLAAVLSACASLAYLDYGKQIHCKAIRSLQEQSVSVSNAIITVYAR---SGSVPLARRVF 672

Query: 345 DRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           D++      ++WT++I    Q  G  ++AV LF +M++  V P+H T+  VL AC     
Sbjct: 673 DQICWRKETITWTSMIVAMAQH-GLGEQAVVLFEEMVRVGVKPDHITYVGVLSAC----- 726

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN-----LVSYN 458
                                         A +G ++  ++ +E +  ++     +  Y 
Sbjct: 727 ------------------------------AHAGFVDKGKRYYEQMQNEHGIVPQMSHYA 756

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            MVD +A+     +A E +  +    V      + SLL+ A  +       ++ A  + S
Sbjct: 757 CMVDLHARAGLLTEAHEFIQRMP---VAPDTVVWGSLLA-ACRVRKNADLAELAAGKLLS 812

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV-----ISWT 559
               N   Y+AL ++YS C     A +++K  +D+ V      SWT
Sbjct: 813 IDPHNSGAYSALANVYSACGRWNDAARIWKLRKDKGVKKETGFSWT 858



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 129/495 (26%), Positives = 215/495 (43%), Gaps = 122/495 (24%)

Query: 300 TSGKQLHSWAIRTGL---------------ALDVCVGC---------------------- 322
           ++G+ +H+ A++ GL               ++ V  GC                      
Sbjct: 226 SAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLFDDIPYARRNAFTWN 285

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           SL+ +YAK    G + D+  VF  M D + +SWT +I G  +S GR  +AVK F DM+  
Sbjct: 286 SLLSLYAK---SGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRS-GRFWDAVKTFLDMVSE 341

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG---------------- 426
             AP+ FT  +VL +C  +    V  +V+   VK G  L  CV                 
Sbjct: 342 GFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLG--LSSCVPVANSVLYMYGKCGDAE 399

Query: 427 -----------------NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
                            N ++S+Y   GRME A   FE++ E+++VS+NT++  Y +N  
Sbjct: 400 TARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTIIAGYNQNGL 459

Query: 470 SEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              A +     +  + +   A+T  S+LS  +++  +  G+Q+H+ I+++G   +  I N
Sbjct: 460 DGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMGKQMHSYILRTGMPCSSQIMN 519

Query: 529 ALISMYSRCANVEA---------------------------------AFQVFKEMEDRNV 555
           ALIS Y++  +VE                                  A ++F  M +R+V
Sbjct: 520 ALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREIFDIMNNRDV 579

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG----WK 611
           I+WT+MI G+ ++G    A+E+F  M+  G +PN  T  AVLSAC+    +  G     K
Sbjct: 580 IAWTAMIVGYHQNGQNDEAMELFRSMILIGPEPNSHTLAAVLSACASLAYLDYGKQIHCK 639

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
             RS+ ++   V        ++ +  RSGS+  A      +    + + W + + A   H
Sbjct: 640 AIRSLQEQSVSVSN-----AIITVYARSGSVPLARRVFDQICWRKETITWTSMIVAMAQH 694

Query: 672 GDTELGKHAAEMILE 686
           G   LG+ A  +  E
Sbjct: 695 G---LGEQAVVLFEE 706



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 81/368 (22%), Positives = 161/368 (43%), Gaps = 71/368 (19%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRG----------------------------RALD 422
           +A +L+ C   ++ +    ++ HAVK G                            R L 
Sbjct: 212 YARLLQLCRTAVNPSAGRAIHAHAVKAGLLVSTYLCNNLLAYYASVGVSRGCFREARCLF 271

Query: 423 DCVG---------NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           D +          NSL+S+YA+SGR+ DA   F  + +++ VS+  M+    ++     A
Sbjct: 272 DDIPYARRNAFTWNSLLSLYAKSGRLPDAHVVFAEMPDRDAVSWTIMIVGLNRSGRFWDA 331

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +   ++   G   S +T  ++LS  +++ A G G ++H  ++K G  S   + N+++ M
Sbjct: 332 VKTFLDMVSEGFAPSQFTLTNVLSSCAAMEACGVGRKVHPFVVKLGLSSCVPVANSVLYM 391

Query: 534 YSRCANVEAAFQVFKEME-------------------------------DRNVISWTSMI 562
           Y +C + E A  VF+ M+                               +R+++SW ++I
Sbjct: 392 YGKCGDAETARAVFERMQVRSVSSWNVMVSLYTHQGRMELAVSMFENMVERSIVSWNTII 451

Query: 563 TGFAKHGFAARALEIFYKML-ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
            G+ ++G    AL+ F +ML A  ++P+  T  +VLSAC++  ++  G K   S     G
Sbjct: 452 AGYNQNGLDGMALKFFSRMLSASSMEPDAFTVTSVLSACANLRMLKMG-KQMHSYILRTG 510

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           +    +    ++    +SGS+  A   + +++    +V+ +   L      GDT+  +  
Sbjct: 511 MPCSSQIMNALISTYAKSGSVETARRIMDQAVVADLNVISFTALLEGYVKLGDTKQAREI 570

Query: 681 AEMILEQD 688
            +++  +D
Sbjct: 571 FDIMNNRD 578


>gi|242082165|ref|XP_002445851.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
 gi|241942201|gb|EES15346.1| hypothetical protein SORBIDRAFT_07g026890 [Sorghum bicolor]
          Length = 1084

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 263/818 (32%), Positives = 452/818 (55%), Gaps = 16/818 (1%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL--- 109
            + ++G   +A+     M  +G      T   +L +C       +GK+VH    +S L   
Sbjct: 274  YFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWD 333

Query: 110  ------EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
                    +  + + L+ +Y KCGD+  A ++F +M +K ++  W+ ++  Y    +  +
Sbjct: 334  LESVQSGIDEALGSKLVFMYVKCGDMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEE 393

Query: 164  AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
            ++ +F +M ELG  P+E+  S +++  +       G + +G+L+K G F +   V  ALI
Sbjct: 394  SLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLG-FGTQCAVCNALI 452

Query: 224  DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
              + K ++ +++A  VFD+M  ++T+ W  +I+ CT  G   +AI LF+ M + G   D 
Sbjct: 453  SFYAKSNM-IDNAVLVFDRMPHQDTISWNSVISGCTSNGLNSEAIELFVRMWMQGHELDS 511

Query: 284  FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
             TL  V+ AC+    +  G+ +H ++++TGL  +  +  +L+DMY+ C+       + ++
Sbjct: 512  TTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCS---DWHSTNQI 568

Query: 344  FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
            F  M   NV+SWTA+IT Y ++G  DK A  L  +M+   + P+ F   SVL        
Sbjct: 569  FRNMAQKNVVSWTAMITSYTRAGLFDKVA-GLLQEMVLDGIKPDVFAVTSVLHGFAGDES 627

Query: 404  SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
                + V+ +A++ G      V N+L+ MY     ME+AR  F+ +  K+++S+NT++  
Sbjct: 628  LKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGG 687

Query: 464  YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
            Y++N  + ++F L  ++       +  T   +L   +SI ++ +G +IHA  ++ GF  +
Sbjct: 688  YSRNNFANESFSLFSDML-LQFKPNTVTMTCILPAVASISSLERGREIHAYALRRGFLED 746

Query: 524  HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
                NAL+ MY +C  +  A  +F  +  +N+ISWT MI G+  HG    A+ +F +M  
Sbjct: 747  SYTSNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGYGMHGCGKDAVALFEQMRG 806

Query: 584  DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
             G++P+  ++ A+L AC H+GL +EGWK F +M  E+ I  +++HY C+VDLL  +G+L 
Sbjct: 807  SGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTCIVDLLSHTGNLK 866

Query: 644  EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
            EA EFI SMP+  D  +W + L  CR+H D +L +  A+ + + +P++   ++LL+N+YA
Sbjct: 867  EAFEFIESMPIEPDSSIWVSLLHGCRIHRDVKLAEKVADRVFKLEPENTGYYVLLANIYA 926

Query: 704  SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
             A  WE V  ++ ++  R L +  GCSWIE   KVH F     +HP+   I   LD +A 
Sbjct: 927  EAERWEAVKKLKNKIGGRGLRENTGCSWIEVRGKVHVFIADNRNHPEWNRIAEFLDHVAR 986

Query: 764  KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
            +++E G+ P   + L    +    + L  HS K+AV FG++   + +PIRV KN +VC  
Sbjct: 987  RMREEGHDPKKKYSLMGANDAVHDEALCGHSSKLAVTFGVLHLPEGRPIRVTKNSKVCSH 1046

Query: 824  CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            CH A K+IS +  REI+LRDS+RFHH + G+CSC  ++
Sbjct: 1047 CHEAAKFISKMCNREIILRDSSRFHHFEGGRCSCRGHF 1084



 Score =  248 bits (632), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 187/713 (26%), Positives = 328/713 (46%), Gaps = 32/713 (4%)

Query: 34  PPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           PP +A       L   +  +   G  Q+ +     M   G  PD    S +LK      +
Sbjct: 157 PPRVADVRVWTSL---MSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGS 213

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
              G+++H LL +  L     + N+LI+LYS+CG + +A ++F SM + RD +SW+S IS
Sbjct: 214 ITEGEVIHGLLEKLGLGEACAVANALIALYSRCGCMEDAMQVFDSM-HARDAISWNSTIS 272

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF- 212
            Y + G    A+ +F +M   G   +     +V+ AC+      +G +++G+ +K G   
Sbjct: 273 GYFSNGWHDRAVDLFSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLW 332

Query: 213 -------DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRCTQLGCP 264
                    D  +G  L+ M+VK   D+ SA +VFD M  K  V  W L++    +    
Sbjct: 333 DLESVQSGIDEALGSKLVFMYVKCG-DMGSARRVFDAMPSKGNVHVWNLIMGGYAKAAEF 391

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            +++ LF  M   G  PD   LS ++   + L     G   H + ++ G      V  +L
Sbjct: 392 EESLLLFEQMHELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNAL 451

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           +  YAK  +   +D++  VFDRM   + +SW ++I+G   S G + EA++LF  M     
Sbjct: 452 ISFYAKSNM---IDNAVLVFDRMPHQDTISWNSVISG-CTSNGLNSEAIELFVRMWMQGH 507

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
             +  T  SVL AC       V   V+ ++VK G   +  + N+L+ MY+         +
Sbjct: 508 ELDSTTLLSVLPACARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQ 567

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F ++ +KN+VS+  M+ +Y +    +K   LL E+   G+    +   S+L G +   +
Sbjct: 568 IFRNMAQKNVVSWTAMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVLHGFAGDES 627

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           + +G+ +H   I++G E    + NAL+ MY  C N+E A  VF  + ++++ISW ++I G
Sbjct: 628 LKQGKSVHGYAIRNGMEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGG 687

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           ++++ FA  +  +F  ML    KPN +T   +L A +    +  G +   +     G ++
Sbjct: 688 YSRNNFANESFSLFSDMLLQ-FKPNTVTMTCILPAVASISSLERG-REIHAYALRRGFLE 745

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
                  +VD+  + G+L  A      +    +++ W   +    +HG    GK A  + 
Sbjct: 746 DSYTSNALVDMYVKCGALLVARVLFDRLT-KKNLISWTIMIAGYGMHG---CGKDAVALF 801

Query: 685 --LEQDPQDPAAHILLSNLYA------SAGHWEYVANIRKRMKERNLIKEAGC 729
             +     +P      + LYA      +A  W++   +RK  K    +K   C
Sbjct: 802 EQMRGSGVEPDTASFSAILYACCHSGLTAEGWKFFNAMRKEYKIEPKLKHYTC 854



 Score =  218 bits (555), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 178/657 (27%), Positives = 303/657 (46%), Gaps = 46/657 (7%)

Query: 38  AQPTTSEPLSNRLIYHLNDGRVQKAIFTLDL-----MTQKGNHPDLDTYSLLLKSCIRSR 92
           A P+   P S  L   +N  R+Q+     DL     +        + +Y  +++ C   R
Sbjct: 50  AAPSPRNPPSRVLSSDVNL-RIQRLCQAGDLAAALRLLGSDGGVGVRSYCAVVQLCGEER 108

Query: 93  NFHLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSS 150
           +    +  H+L+         SV+   L+  Y KCGDL  A  +F  M  +  D+  W+S
Sbjct: 109 SLEAARRAHALVRAGTGGIIGSVLGKRLVLAYLKCGDLGGARMVFDEMPPRVADVRVWTS 168

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           ++S+Y   G   + + +F +M   G  P+ +  S V++  ++  ++  G +I+G L K G
Sbjct: 169 LMSAYAKAGDFQEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLG 228

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             ++   V  ALI ++ +    +E A +VFD M  ++ + W   I+     G    A+ L
Sbjct: 229 LGEA-CAVANALIALYSRCGC-MEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDL 286

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL---------ALDVCVG 321
           F  M   G      T+  V+ AC+EL     GK +H +++++GL          +D  +G
Sbjct: 287 FSKMWSEGTEISSVTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALG 346

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             LV MY KC   G +  +R+VFD M    NV  W  I+ GY ++    +E++ LF  M 
Sbjct: 347 SKLVFMYVKC---GDMGSARRVFDAMPSKGNVHVWNLIMGGYAKA-AEFEESLLLFEQMH 402

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +  + P+    + +LK    L  +      + + VK G      V N+LIS YA+S  ++
Sbjct: 403 ELGITPDEHALSCLLKCITCLSCARDGLVAHGYLVKLGFGTQCAVCNALISFYAKSNMID 462

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKN-LNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           +A   F+ +  ++ +S+N+++     N LNSE A EL   +   G    + T  S+L   
Sbjct: 463 NAVLVFDRMPHQDTISWNSVISGCTSNGLNSE-AIELFVRMWMQGHELDSTTLLSVLPAC 521

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +       G  +H   +K+G      + NAL+ MYS C++  +  Q+F+ M  +NV+SWT
Sbjct: 522 ARSHYWFVGRVVHGYSVKTGLIGETSLANALLDMYSNCSDWHSTNQIFRNMAQKNVVSWT 581

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MIT + + G   +   +  +M+ DGIKP+     +VL    H     E  K  +S+   
Sbjct: 582 AMITSYTRAGLFDKVAGLLQEMVLDGIKPDVFAVTSVL----HGFAGDESLKQGKSV--- 634

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP---------LSADVLVWRTFLGA 667
           HG   R      M  LL  + +L E     R+M           + D++ W T +G 
Sbjct: 635 HGYAIRNG----MEKLLPVANALMEMYVNCRNMEEARLVFDHVTNKDIISWNTLIGG 687



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 217/483 (44%), Gaps = 39/483 (8%)

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA-IR 311
           L I R  Q G    A+RL       G +  R +   VV  C E     + ++ H+     
Sbjct: 68  LRIQRLCQAGDLAAALRLLGS---DGGVGVR-SYCAVVQLCGEERSLEAARRAHALVRAG 123

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH--NVMSWTAIITGYVQSGGRD 369
           TG  +   +G  LV  Y KC   G +  +R VFD M     +V  WT++++ Y ++G   
Sbjct: 124 TGGIIGSVLGKRLVLAYLKC---GDLGGARMVFDEMPPRVADVRVWTSLMSAYAKAGDF- 179

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           +E V LF  M    V+P+    + VLK   +L      E ++    K G      V N+L
Sbjct: 180 QEGVSLFRQMQCCGVSPDAHAVSCVLKCIASLGSITEGEVIHGLLEKLGLGEACAVANAL 239

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I++Y+R G MEDA + F+S+  ++ +S+N+ +  Y  N   ++A +L  ++   G   S+
Sbjct: 240 IALYSRCGCMEDAMQVFDSMHARDAISWNSTISGYFSNGWHDRAVDLFSKMWSEGTEISS 299

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSG----FES-----NHCIYNALISMYSRCANV 540
            T  S+L   + +G    G+ +H   +KSG     ES     +  + + L+ MY +C ++
Sbjct: 300 VTVLSVLPACAELGFELVGKVVHGYSMKSGLLWDLESVQSGIDEALGSKLVFMYVKCGDM 359

Query: 541 EAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS- 598
            +A +VF  M  + NV  W  ++ G+AK      +L +F +M   GI P+      +L  
Sbjct: 360 GSARRVFDAMPSKGNVHVWNLIMGGYAKAAEFEESLLLFEQMHELGITPDEHALSCLLKC 419

Query: 599 ----ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
               +C+  GL++ G+        + G   +      ++    +S  +  A+     MP 
Sbjct: 420 ITCLSCARDGLVAHGY------LVKLGFGTQCAVCNALISFYAKSNMIDNAVLVFDRMP- 472

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ--DPAAHILLSNLYASA-GHWEYV 711
             D + W + +  C  +G   L   A E+ +    Q  +  +  LLS L A A  H+ +V
Sbjct: 473 HQDTISWNSVISGCTSNG---LNSEAIELFVRMWMQGHELDSTTLLSVLPACARSHYWFV 529

Query: 712 ANI 714
             +
Sbjct: 530 GRV 532


>gi|413923915|gb|AFW63847.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1274

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/740 (37%), Positives = 427/740 (57%), Gaps = 12/740 (1%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L  A ++F  +    D  +++++I +Y   G    AI ++  ML     PN+Y F  V
Sbjct: 48  GQLALARQVFDRIPAP-DARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFV 106

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++ACS   ++  G  I+      G   +D+ V  ALID++++       A  VF KM  +
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAG-LHTDLFVSTALIDLYIR-CARFGPARNVFAKMPMR 164

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQL 305
           + V W  M+      G    AI   LDM   G L P+  TL  ++   ++      G  +
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224

Query: 306 HSWAIRTGLALD---VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           H++ +R  L  +   V +G +L+DMYAKC     +  + +VF  M   N ++W+A+I G+
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCK---QLVYACRVFHGMPVRNDVTWSALIGGF 281

Query: 363 VQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           V    R  EA  LF DM ++G    +  + AS L+ C +L D ++  Q++    K G   
Sbjct: 282 VLCD-RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D    NSL+SMYA++G + +A   F+ +  K+ +SY  ++    +N  +E+AF +  +++
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQ 400

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              +     T  SL+   S + A+  G+  H  +I  G      I N+LI MY++C  ++
Sbjct: 401 ACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKID 460

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            + QVF +M  R+V+SW +MI G+  HG    A  +F  M   G  P+ +T+I +++ACS
Sbjct: 461 LSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACS 520

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+GL++EG   F +M  ++GI+ RMEHY CMVDLL R G L EA +FI+SMPL ADV VW
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVW 580

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              LGACR+H + +LGK  + +I +  P+     +LLSN++++AG ++  A +R   K +
Sbjct: 581 GALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 640

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
              K  G SWIE +  +H F  G+ SHP + +IY ELD + + IK+ GY  DT+FVL +L
Sbjct: 641 GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDL 700

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EEE+K + L  HSEK+A+AFG++S ++ K I V KNLRVCGDCHTAIKY+++V  R I++
Sbjct: 701 EEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIV 760

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFHH K+G+CSC ++W
Sbjct: 761 RDTNRFHHFKNGQCSCGNFW 780



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 242/493 (49%), Gaps = 12/493 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+  +LK+C    +   G+ +H+    + L  +  +  +LI LY +C     A  +
Sbjct: 98  PNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNV 157

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTE 194
           F  M   RD+V+W++M++ Y N G    AI   ++M +  G  PN     +++   +   
Sbjct: 158 FAKM-PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHG 216

Query: 195 NVAIGHIIYGFLLKC--GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
            +  G  I+ + L+      +  V +G AL+DM+ K    L  A +VF  M  +N V W+
Sbjct: 217 ALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK-QLVYACRVFHGMPVRNDVTWS 275

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGF-LPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            +I          +A  LF DM++ G       +++  +  C+ L     G QLH+   +
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAK 335

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           +G+  D+    SL+ MYAK    G ++++   FD +   + +S+ A+++G VQ+ G+ +E
Sbjct: 336 SGIHADLTASNSLLSMYAKA---GLINEATMFFDEIAVKDTISYGALLSGCVQN-GKAEE 391

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A  +F  M    + P+  T  S++ AC +L      +  +   + RG AL+  + NSLI 
Sbjct: 392 AFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLID 451

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYA+ G+++ +R+ F+ +  +++VS+NTM+  Y  +   ++A  L   +++ G      T
Sbjct: 452 MYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVT 511

Query: 492 FASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           F  L++  S  G + +G+     +  K G       Y  ++ + +R   ++ A+Q  + M
Sbjct: 512 FICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSM 571

Query: 551 EDR-NVISWTSMI 562
             + +V  W +++
Sbjct: 572 PLKADVRVWGALL 584



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 175/349 (50%), Gaps = 12/349 (3%)

Query: 55  NDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           N G    AI   LD+    G  P+  T   LL    +      G  +H+   R+ LE N 
Sbjct: 178 NHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNE 237

Query: 114 ---VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
              +I  +L+ +Y+KC  L  A ++F  M  + D V+WS++I  +V   +  +A ++F +
Sbjct: 238 EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND-VTWSALIGGFVLCDRMTEAFNLFKD 296

Query: 171 MLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           ML  G C  +    ++ +R C++  ++ +G  ++  + K G   +D+    +L+ M+ K 
Sbjct: 297 MLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSG-IHADLTASNSLLSMYAKA 355

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            + +  A   FD++  K+T+ +  +++ C Q G   +A  +F  M      PD  T+  +
Sbjct: 356 GL-INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSL 414

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + ACS L     GK  H   I  GLAL+  +  SL+DMYAKC   G +D SR+VFD+M  
Sbjct: 415 IPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKC---GKIDLSRQVFDKMPA 471

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +V+SW  +I GY    G  KEA  LF  M     AP+  TF  ++ AC
Sbjct: 472 RDVVSWNTMIAGY-GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC 519



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 17/213 (7%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G+ ++A      M      PD+ T   L+ +C        GK  H  +    L   +
Sbjct: 384 VQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALET 443

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I NSLI +Y+KCG ++ + ++F  M   RD+VSW++MI+ Y   G   +A  +F+ M  
Sbjct: 444 SICNSLIDMYAKCGKIDLSRQVFDKM-PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKN 502

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIG-HII------YGFLLKCGYFDSDVCVGCALIDMF 226
            GF P++  F  +I ACS++  V  G H        YG L +  ++   +C    ++D+ 
Sbjct: 503 QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY---IC----MVDLL 555

Query: 227 VKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
            +G + L+ AY+    M  K  V  W  ++  C
Sbjct: 556 ARGGL-LDEAYQFIQSMPLKADVRVWGALLGAC 587


>gi|413923916|gb|AFW63848.1| hypothetical protein ZEAMMB73_561595 [Zea mays]
          Length = 1174

 Score =  496 bits (1276), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 275/740 (37%), Positives = 427/740 (57%), Gaps = 12/740 (1%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L  A ++F  +    D  +++++I +Y   G    AI ++  ML     PN+Y F  V
Sbjct: 48  GQLALARQVFDRIPAP-DARAYNALIRAYSWLGPFHAAIDLYRSMLRFRVAPNKYTFPFV 106

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++ACS   ++  G  I+      G   +D+ V  ALID++++       A  VF KM  +
Sbjct: 107 LKACSALVDLRAGRTIHAHAAAAG-LHTDLFVSTALIDLYIR-CARFGPARNVFAKMPMR 164

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQL 305
           + V W  M+      G    AI   LDM   G L P+  TL  ++   ++      G  +
Sbjct: 165 DVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSI 224

Query: 306 HSWAIRTGLALD---VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           H++ +R  L  +   V +G +L+DMYAKC     +  + +VF  M   N ++W+A+I G+
Sbjct: 225 HAYCLRACLEQNEEQVLIGTALLDMYAKCK---QLVYACRVFHGMPVRNDVTWSALIGGF 281

Query: 363 VQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           V    R  EA  LF DM ++G    +  + AS L+ C +L D ++  Q++    K G   
Sbjct: 282 VLCD-RMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSGIHA 340

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D    NSL+SMYA++G + +A   F+ +  K+ +SY  ++    +N  +E+AF +  +++
Sbjct: 341 DLTASNSLLSMYAKAGLINEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQ 400

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              +     T  SL+   S + A+  G+  H  +I  G      I N+LI MY++C  ++
Sbjct: 401 ACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKCGKID 460

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            + QVF +M  R+V+SW +MI G+  HG    A  +F  M   G  P+ +T+I +++ACS
Sbjct: 461 LSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAACS 520

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+GL++EG   F +M  ++GI+ RMEHY CMVDLL R G L EA +FI+SMPL ADV VW
Sbjct: 521 HSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSMPLKADVRVW 580

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              LGACR+H + +LGK  + +I +  P+     +LLSN++++AG ++  A +R   K +
Sbjct: 581 GALLGACRIHKNIDLGKQVSRIIQKLGPEGTGNFVLLSNIFSAAGRFDEAAEVRIIQKVK 640

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
              K  G SWIE +  +H F  G+ SHP + +IY ELD + + IK+ GY  DT+FVL +L
Sbjct: 641 GFKKSPGYSWIEINGSLHAFVGGDQSHPCSRDIYHELDNIMVDIKKLGYQADTSFVLQDL 700

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EEE+K + L  HSEK+A+AFG++S ++ K I V KNLRVCGDCHTAIKY+++V  R I++
Sbjct: 701 EEEEKEKALLYHSEKLAIAFGVLSLNEDKTIFVTKNLRVCGDCHTAIKYMTLVRNRTIIV 760

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFHH K+G+CSC ++W
Sbjct: 761 RDTNRFHHFKNGQCSCGNFW 780



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 243/493 (49%), Gaps = 12/493 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+  +LK+C    +   G+ +H+    + L  +  +  +LI LY +C     A  +
Sbjct: 98  PNKYTFPFVLKACSALVDLRAGRTIHAHAAAAGLHTDLFVSTALIDLYIRCARFGPARNV 157

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTE 194
           F  M   RD+V+W++M++ Y N G    AI   ++M +  G  PN     +++   +   
Sbjct: 158 FAKM-PMRDVVAWNAMLAGYANHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHG 216

Query: 195 NVAIGHIIYGFLLKCGYFDSD--VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
            +  G  I+ + L+     ++  V +G AL+DM+ K    L  A +VF  M  +N V W+
Sbjct: 217 ALFQGTSIHAYCLRACLEQNEEQVLIGTALLDMYAKCK-QLVYACRVFHGMPVRNDVTWS 275

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGF-LPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            +I          +A  LF DM++ G       +++  +  C+ L     G QLH+   +
Sbjct: 276 ALIGGFVLCDRMTEAFNLFKDMLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAK 335

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           +G+  D+    SL+ MYAK    G ++++   FD +   + +S+ A+++G VQ+ G+ +E
Sbjct: 336 SGIHADLTASNSLLSMYAKA---GLINEATMFFDEIAVKDTISYGALLSGCVQN-GKAEE 391

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A  +F  M    + P+  T  S++ AC +L      +  +   + RG AL+  + NSLI 
Sbjct: 392 AFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALETSICNSLID 451

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYA+ G+++ +R+ F+ +  +++VS+NTM+  Y  +   ++A  L   +++ G      T
Sbjct: 452 MYAKCGKIDLSRQVFDKMPARDVVSWNTMIAGYGIHGLGKEATTLFLGMKNQGFAPDDVT 511

Query: 492 FASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           F  L++  S  G + +G+     +  K G       Y  ++ + +R   ++ A+Q  + M
Sbjct: 512 FICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHYICMVDLLARGGLLDEAYQFIQSM 571

Query: 551 EDR-NVISWTSMI 562
             + +V  W +++
Sbjct: 572 PLKADVRVWGALL 584



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 175/349 (50%), Gaps = 12/349 (3%)

Query: 55  NDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           N G    AI   LD+    G  P+  T   LL    +      G  +H+   R+ LE N 
Sbjct: 178 NHGMYHHAIAHLLDMQDHGGLRPNASTLVSLLPLLAQHGALFQGTSIHAYCLRACLEQNE 237

Query: 114 ---VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
              +I  +L+ +Y+KC  L  A ++F  M  + D V+WS++I  +V   +  +A ++F +
Sbjct: 238 EQVLIGTALLDMYAKCKQLVYACRVFHGMPVRND-VTWSALIGGFVLCDRMTEAFNLFKD 296

Query: 171 MLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           ML  G C  +    ++ +R C++  ++ +G  ++  + K G   +D+    +L+ M+ K 
Sbjct: 297 MLVEGLCFLSATSVASALRVCASLADLHMGTQLHALIAKSG-IHADLTASNSLLSMYAKA 355

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            + +  A   FD++  K+T+ +  +++ C Q G   +A  +F  M      PD  T+  +
Sbjct: 356 GL-INEATMFFDEIAVKDTISYGALLSGCVQNGKAEEAFLVFKKMQACNMEPDIATMVSL 414

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + ACS L     GK  H   I  GLAL+  +  SL+DMYAKC   G +D SR+VFD+M  
Sbjct: 415 IPACSHLAALQHGKCSHGSVIIRGLALETSICNSLIDMYAKC---GKIDLSRQVFDKMPA 471

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +V+SW  +I GY    G  KEA  LF  M     AP+  TF  ++ AC
Sbjct: 472 RDVVSWNTMIAGY-GIHGLGKEATTLFLGMKNQGFAPDDVTFICLIAAC 519



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 102/213 (47%), Gaps = 17/213 (7%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G+ ++A      M      PD+ T   L+ +C        GK  H  +    L   +
Sbjct: 384 VQNGKAEEAFLVFKKMQACNMEPDIATMVSLIPACSHLAALQHGKCSHGSVIIRGLALET 443

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I NSLI +Y+KCG ++ + ++F  M   RD+VSW++MI+ Y   G   +A  +F+ M  
Sbjct: 444 SICNSLIDMYAKCGKIDLSRQVFDKM-PARDVVSWNTMIAGYGIHGLGKEATTLFLGMKN 502

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIG-HII------YGFLLKCGYFDSDVCVGCALIDMF 226
            GF P++  F  +I ACS++  V  G H        YG L +  ++   +C    ++D+ 
Sbjct: 503 QGFAPDDVTFICLIAACSHSGLVTEGKHWFDTMTHKYGILPRMEHY---IC----MVDLL 555

Query: 227 VKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
            +G + L+ AY+    M  K  V  W  ++  C
Sbjct: 556 ARGGL-LDEAYQFIQSMPLKADVRVWGALLGAC 587


>gi|302797883|ref|XP_002980702.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
 gi|300151708|gb|EFJ18353.1| hypothetical protein SELMODRAFT_113181 [Selaginella moellendorffii]
          Length = 1108

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 277/812 (34%), Positives = 452/812 (55%), Gaps = 23/812 (2%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVI 115
            GR   A+     +  +G  P+  T   +L +   S  +F   +  H  +  S    + V+
Sbjct: 313  GRHGDAMAIFRRLRLEGMRPNSVTLITILNALAASGVDFGAARKFHGRIWESGYLRDVVV 372

Query: 116  LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             N++IS+Y+KCG  + A  +F+ +  K D++SW++M+ +  +R      ++ F  ML  G
Sbjct: 373  GNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNTMLGASEDRKSFGKVVNTFHHMLLAG 432

Query: 176  FCPNEYCFSAVIRACSNTENVAIGHIIYGFLL--KCGYFDSDVCVGCALIDMFVK-GSVD 232
              PN+  F A++ ACSN+E +  G  I+  +L  +  Y +S V     L+ M+ K GS+ 
Sbjct: 433  IDPNKVSFIAILNACSNSEALDFGRKIHSLILTRRRDYVESSVAT--MLVSMYGKCGSI- 489

Query: 233  LESAYKVFDKMT--EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
               A  VF +M    ++ V W +M+    Q    ++A    ++M+  G LPD  + + V+
Sbjct: 490  -AEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEAFGALMEMLQGGVLPDALSFTSVL 548

Query: 291  SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            S+C      +   Q+    I        C+  +L+ M+ +C     ++ +R VFD M   
Sbjct: 549  SSC----YCSQEAQVLRMCILESGYRSACLETALISMHGRCR---ELEQARSVFDEMDHG 601

Query: 351  NVMSWTAIITGYVQSGGRD-KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWTA+++   ++  RD KE   LF  M    V P+ FT A+ L  C +     + + 
Sbjct: 602  DVVSWTAMVSATAEN--RDFKEVHHLFRRMQLEGVIPDKFTLATTLDTCLDSTTLGLGKI 659

Query: 410  VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
            ++    + G   D  V N+L++MY+  G   +A   FE++  ++LVS+N M  AYA+   
Sbjct: 660  IHACVTEIGLEADIAVENALLNMYSNCGDWREALSFFETMKARDLVSWNIMSAAYAQAGL 719

Query: 470  SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            +++A  L   ++  GV     TF++ L+ +     +  G+  H    +SG +S+  +   
Sbjct: 720  AKEAVLLFRHMQLEGVKPDKLTFSTTLNVSGGSALVSDGKLFHGLAAESGLDSDVSVATG 779

Query: 530  LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            L+ +Y++C  ++ A  +F+      V+   ++I   A+HGF+  A+++F+KM  +G++P+
Sbjct: 780  LVKLYAKCGKLDEAISLFRGACQWTVVLLNAIIGALAQHGFSEEAVKMFWKMQQEGVRPD 839

Query: 590  GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
              T ++++SAC HAG++ EG   F +M +  GI   +EHYAC VDLLGR+G L  A + I
Sbjct: 840  VATLVSIISACGHAGMVEEGCSSFLTMKEYFGISPTLEHYACFVDLLGRAGQLEHAEQII 899

Query: 650  RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            R MP   + LVW + LG C++ GD ELG+  A+ ILE DP + AAH++LSN+Y + G W+
Sbjct: 900  RKMPFEDNTLVWTSLLGTCKLQGDAELGERCAQRILELDPHNSAAHVVLSNIYCATGKWK 959

Query: 710  YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
                 RK++ ++N+    G SW+E   +VH+F  G+ SHP+T EIY  LD+L L ++  G
Sbjct: 960  DADVDRKKLLDQNVKNAPGMSWLEIGKQVHEFVAGDRSHPQTDEIYVVLDKLELLMRRAG 1019

Query: 770  YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
            Y  D      + E+E K + L  HSE+IA+AFGLI+T     +++ KNLRVCGDCHTA K
Sbjct: 1020 YEADKGL---DAEDELKEKALGYHSERIAIAFGLIATPPDTTLKIVKNLRVCGDCHTATK 1076

Query: 830  YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            YISM+ GREI++RDS RFHH  +G CSC D W
Sbjct: 1077 YISMIMGREIIVRDSLRFHHFSNGTCSCKDCW 1108



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 212/726 (29%), Positives = 342/726 (47%), Gaps = 76/726 (10%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +  G + + + +L    +     DL  Y+ LL+SC+ S +   GK  H L+  + LE + 
Sbjct: 1   MKRGLIIRQLCSLSGAVRVDRAADLQEYTALLQSCVDSNDLAKGKRAHELIANAGLEQHL 60

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-L 172
            + N LI++Y +CG L EA+ IF  M  +R++VSW+++IS+    G    A  +F  M L
Sbjct: 61  FLGNCLINMYVRCGSLEEAHAIFSKM-EERNVVSWTALISANAQSGAFARAFALFRTMLL 119

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY---FDSDVCVGCALIDMFVK- 228
           E    PN Y   A++ AC+N+ ++AIG  I+  + + G      +   VG A+I+M+ K 
Sbjct: 120 ESSAAPNSYTLVAMLNACANSRDLAIGRSIHAMIWELGLERESTTATLVGNAMINMYAKC 179

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR----DAIRLFLDMILSGFLPDRF 284
           GS   E A  VF  + EK+ V WT M     Q    R    DA+R+F +M+L    P+  
Sbjct: 180 GSP--EDAIAVFLTIPEKDVVSWTAMAGAYAQ---ERRFYPDALRIFREMLLQPLAPNVI 234

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T    + AC+ L     G  LHS     GL  D   G +L++MY KC   G  + +  VF
Sbjct: 235 TFITALGACTSLR---DGTWLHSLLHEAGLGFDPLAGNALINMYGKC---GDWEGAYGVF 288

Query: 345 DRMLDH---NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA-CGN 400
             M      +++SW A+I+  V++ GR  +A+ +F  +    + PN  T  ++L A   +
Sbjct: 289 KAMASRQELDLVSWNAMISASVEA-GRHGDAMAIFRRLRLEGMRPNSVTLITILNALAAS 347

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNT 459
            +D   A + +    + G   D  VGN++ISMYA+ G    A   F  +  K +++S+NT
Sbjct: 348 GVDFGAARKFHGRIWESGYLRDVVVGNAIISMYAKCGFFSAAWTVFRRIRWKCDVISWNT 407

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII--- 516
           M+ A     +  K     H +   G+  +  +F ++L+  S+  A+  G +IH+ I+   
Sbjct: 408 MLGASEDRKSFGKVVNTFHHMLLAGIDPNKVSFIAILNACSNSEALDFGRKIHSLILTRR 467

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEM--EDRNVISWTSMITGFAKHGFAARA 574
           +   ES+  +   L+SMY +C ++  A  VFKEM    R++++W  M+  +A++  +  A
Sbjct: 468 RDYVESS--VATMLVSMYGKCGSIAEAELVFKEMPLPSRSLVTWNVMLGAYAQNDRSKEA 525

Query: 575 LEIFYKMLADGIKPNGITYIAVL----------------------SACSHAGLIS----- 607
                +ML  G+ P+ +++ +VL                      SAC    LIS     
Sbjct: 526 FGALMEMLQGGVLPDALSFTSVLSSCYCSQEAQVLRMCILESGYRSACLETALISMHGRC 585

Query: 608 EGWKHFRSMYDE--HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA---DVLVWR 662
              +  RS++DE  HG V     +  MV     +    E     R M L     D     
Sbjct: 586 RELEQARSVFDEMDHGDVV---SWTAMVSATAENRDFKEVHHLFRRMQLEGVIPDKFTLA 642

Query: 663 TFLGACRVHGDTELGK--HA--AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           T L  C       LGK  HA   E+ LE    D A    L N+Y++ G W    +  + M
Sbjct: 643 TTLDTCLDSTTLGLGKIIHACVTEIGLE---ADIAVENALLNMYSNCGDWREALSFFETM 699

Query: 719 KERNLI 724
           K R+L+
Sbjct: 700 KARDLV 705



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 103/349 (29%), Positives = 174/349 (49%), Gaps = 12/349 (3%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y  ND R ++A   L  M Q G  PD  +++ +L SC  S+     +++   +  S    
Sbjct: 516 YAQND-RSKEAFGALMEMLQGGVLPDALSFTSVLSSCYCSQE---AQVLRMCILESGYR- 570

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++ +  +LIS++ +C +L +A  +F  M +  D+VSW++M+S+        +  H+F  M
Sbjct: 571 SACLETALISMHGRCRELEQARSVFDEM-DHGDVVSWTAMVSATAENRDFKEVHHLFRRM 629

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+++  +  +  C ++  + +G II+  + + G  ++D+ V  AL++M+     
Sbjct: 630 QLEGVIPDKFTLATTLDTCLDSTTLGLGKIIHACVTEIG-LEADIAVENALLNMY-SNCG 687

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A   F+ M  ++ V W +M     Q G  ++A+ LF  M L G  PD+ T S  ++
Sbjct: 688 DWREALSFFETMKARDLVSWNIMSAAYAQAGLAKEAVLLFRHMQLEGVKPDKLTFSTTLN 747

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
                 L + GK  H  A  +GL  DV V   LV +YAKC   G +D++  +F       
Sbjct: 748 VSGGSALVSDGKLFHGLAAESGLDSDVSVATGLVKLYAKC---GKLDEAISLFRGACQWT 804

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           V+   AII    Q  G  +EAVK+F  M Q  V P+  T  S++ ACG+
Sbjct: 805 VVLLNAIIGALAQH-GFSEEAVKMFWKMQQEGVRPDVATLVSIISACGH 852


>gi|225432742|ref|XP_002279134.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22690
           [Vitis vinifera]
          Length = 836

 Score =  495 bits (1275), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 271/804 (33%), Positives = 446/804 (55%), Gaps = 49/804 (6%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGD---LNEANKIFKSMGNKRDIVS------W 148
           K +H  +T++ L+     L  L++  ++      L+ A K F+    K D+ S       
Sbjct: 42  KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELF--KEDVRSDDALFML 99

Query: 149 SSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           +S+I  Y + G   +AI ++V ML LG  PN Y F  V+  C+       G  ++G ++K
Sbjct: 100 NSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVK 159

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
            G  + DV +   LI  + +    ++  +KVF+ M+E+N V WT +I    +   P++A+
Sbjct: 160 MG-LEEDVFIQNCLIHFYAECG-HMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAV 217

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
            LF +M+ +G  P   T+  V+SAC++L     G+++ ++    GL L+  +  +LVDMY
Sbjct: 218 SLFFEMVEAGIRPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVNALVDMY 277

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
            KC   G++D ++++FD  +D N++ +  I++ Y + G   +EA+ +  +M+Q    P+ 
Sbjct: 278 MKC---GAIDAAKRLFDECVDRNLVLYNTILSNYARQG-LAREALAILDEMLQQGPRPDR 333

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA-------------- 434
            T  S + A   L+D    +  + + ++ G    D +GN +I MY               
Sbjct: 334 VTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKCGKPEMACRVFDL 393

Query: 435 -----------------RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                            R+G +E A + F  + E+N V +NTM+    +    E A EL 
Sbjct: 394 MSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELF 453

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            E++  G+     T   + S    +GA    + +H  I K+G   +  +  AL+ M++RC
Sbjct: 454 REMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARC 513

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            + ++A QVF +M +R+V +WT+ I   A  G    A  +F +ML  G+KP+ + ++ VL
Sbjct: 514 GDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVL 573

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           +ACSH G + +G  H  S+ ++HGI  ++EHY CMVDLLGR+G L EA + I+SMP+  +
Sbjct: 574 TACSHGGQVEQGL-HIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPN 632

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
            +VW + L ACRVH + E+  +AAE I E  PQ    H+LLSN+YASAG W  VA +R  
Sbjct: 633 DVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKWTDVARVRLN 692

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
           ++E+ + K  G S ++ +  +H+F  G+ SHP+   I   L ++  +  + G++PD + V
Sbjct: 693 LREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDAGHIPDLSNV 752

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
           L +++E++K   L +HSEK+A+AFGLI+T +S PIRV KNLR+C DCH+  K  S++  R
Sbjct: 753 LLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFAKMASIIYNR 812

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           EI++RD+NRFH  + G CSC DYW
Sbjct: 813 EIIVRDNNRFHFFRQGLCSCCDYW 836



 Score =  214 bits (544), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/544 (25%), Positives = 262/544 (48%), Gaps = 39/544 (7%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++AI     M   G  P+  T+  +L  C +   F  G  VH  + +  LE +  I 
Sbjct: 110 GLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQ 169

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI  Y++CG ++  +K+F+ M ++R++VSW+S+I  Y    +  +A+ +F EM+E G 
Sbjct: 170 NCLIHFYAECGHMDHGHKVFEGM-SERNVVSWTSLICGYARGDRPKEAVSLFFEMVEAGI 228

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            P+      VI AC+   ++ +G  +  ++ + G   + V V  AL+DM++K G++D  +
Sbjct: 229 RPSSVTMVCVISACAKLRDLDMGERVCAYIGELGLKLNKVMVN-ALVDMYMKCGAID--A 285

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++FD+  ++N V +  +++   + G  R+A+ +  +M+  G  PDR T+   +SA ++
Sbjct: 286 AKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQ 345

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     GK  H + IR GL     +G  ++DMY KC   G  + + +VFD M +  V+SW
Sbjct: 346 LVDLFYGKVCHGYVIRNGLEGWDSIGNVIIDMYMKC---GKPEMACRVFDLMSNKTVVSW 402

Query: 356 TAIITGYVQSGGRD------------------------------KEAVKLFSDMIQGQVA 385
            ++  G++++G  +                              ++A++LF +M    + 
Sbjct: 403 NSLTAGFIRNGDVESAWEVFNQIPERNAVFWNTMISGLVQKSLFEDAIELFREMQGEGIK 462

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            +  T   +  ACG L    +A+ V+T+  K G   D  +  +L+ M+AR G  + A + 
Sbjct: 463 ADRVTMMGIASACGYLGAPELAKWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQV 522

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  + E+++ ++   +   A   N E A  L +++   GV      F  +L+  S  G +
Sbjct: 523 FNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSHGGQV 582

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
            +G  I + +   G       Y  ++ +  R   +  AF + K M  + N + W S++  
Sbjct: 583 EQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAA 642

Query: 565 FAKH 568
              H
Sbjct: 643 CRVH 646



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 108/434 (24%), Positives = 170/434 (39%), Gaps = 83/434 (19%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+  LD M Q+G  PD  T    + +  +  +   GK+ H  + R+ LE    I 
Sbjct: 312 GLAREALAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYVIRNGLEGWDSIG 371

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNK------------------------------RDIV 146
           N +I +Y KCG    A ++F  M NK                              R+ V
Sbjct: 372 NVIIDMYMKCGKPEMACRVFDLMSNKTVVSWNSLTAGFIRNGDVESAWEVFNQIPERNAV 431

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
            W++MIS  V +    DAI +F EM   G   +      +  AC       +   ++ ++
Sbjct: 432 FWNTMISGLVQKSLFEDAIELFREMQGEGIKADRVTMMGIASACGYLGAPELAKWVHTYI 491

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
            K G    D+ +  AL+DMF +   D +SA +VF+KMTE++   WT  I      G    
Sbjct: 492 EKNG-IPCDMRLNTALVDMFARCG-DPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEG 549

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A  LF  M++ G  PD      V++ACS                                
Sbjct: 550 ATGLFNQMLIQGVKPDVVLFVQVLTACSH------------------------------- 578

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNV---MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                   G V+    +F  M DH +   +     +   +   G  +EA  L   M    
Sbjct: 579 -------GGQVEQGLHIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSM---P 628

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD---CVGNSLISMYARSGRME 440
           + PN   + S+L AC   +  NV  ++ T+A +R   L      V   L ++YA +G+  
Sbjct: 629 MEPNDVVWGSLLAAC--RVHKNV--EMATYAAERINELAPQRAGVHVLLSNIYASAGKWT 684

Query: 441 DARKAFESLFEKNL 454
           D  +   +L EK +
Sbjct: 685 DVARVRLNLREKGV 698


>gi|449441113|ref|XP_004138328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  495 bits (1274), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 288/839 (34%), Positives = 458/839 (54%), Gaps = 29/839 (3%)

Query: 45  PLSNRLIYH--LNDGRVQ---------------KAIFT-LDLMTQKGNHPDLDTYSLLLK 86
           PL +RL++   LN    Q               +AI T L+L++     PD  T+  L+K
Sbjct: 159 PLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIK 218

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C    + HLGK VH +  +  L  +  + N++I+LY KCG L+EA ++F  M  +++++
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM-PEQNLI 277

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELG--FCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           SW+S+I  +   G  ++A   F  +LE G    P+      ++  CS   NV +G +I+G
Sbjct: 278 SWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHG 337

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
             +K G    ++ V  ALIDM+ K    L  A  +F K+  K+ V W  MI   ++ G  
Sbjct: 338 MAVKLGLVH-ELMVCNALIDMYSKCGC-LSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 265 RDAIRLFLDMILSGFLPD--RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
            +   L   M +   L +    T+  ++ AC E     S + LH +++R        +  
Sbjct: 396 FETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINN 455

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           + +  YAKC   GS+  +  VF  M   +V SW A+I G+ Q+G   K A+  + +M + 
Sbjct: 456 AFIAAYAKC---GSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIK-ALDFYFEMTRL 511

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            + P+ F+  S+L ACG L      ++++   ++ G  ++  V  SL+S+Y    +    
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R  FE++ +KN V +N M+  Y++N    +A  L  ++   G+       AS+L   S +
Sbjct: 572 RTYFETMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            A+G G+++H   +K+    ++ +  +L+ MY++   +  + ++F  +  + V SW  MI
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMI 691

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           TGF  HG   +A+E+F  M     +P+  T++ VL AC HAGL+SEG  +   M   + +
Sbjct: 692 TGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +EHYAC++D+LGR+G L EAL FI  MP   D  +W + L +   + D E+G+  AE
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            +L  +     ++ILLSNLYA+AG W+ V  +R++MK+ +L K+ GCSWIE   KV+ F 
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFI 871

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
            GE S+P + EI    ++L  +I E GY PD + VLHELEE +K + L  HSEK+A+ FG
Sbjct: 872 AGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFG 931

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            ++T +   +R+ KNLR+C DCH A KYIS    REIV+RD+ RFHH K G CSC DYW
Sbjct: 932 FLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 161/633 (25%), Positives = 319/633 (50%), Gaps = 20/633 (3%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSKCGDLNEANKIFK 137
           +   +LL+ C + +N  +G+ +  +L  S       +LN+ LI++YS CG   E+  +F 
Sbjct: 108 EAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFD 167

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENV 196
            + NK ++  W++++S YV      +AIH F+E++ +  F P+ + F  +I+AC+   ++
Sbjct: 168 RLLNK-NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDI 226

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
            +G  ++G  +K G    D+ VG A+I ++ K    L+ A ++FDKM E+N + W  +I 
Sbjct: 227 HLGKSVHGMAVKMGLI-MDLFVGNAMIALYGKCGF-LDEAVELFDKMPEQNLISWNSLIR 284

Query: 257 RCTQLGCPRDAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
             ++ G   +A R F  ++ S  G +PD  T+  ++  CS       G  +H  A++ GL
Sbjct: 285 GFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGL 344

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             ++ V  +L+DMY+KC   G + ++  +F ++ + +V+SW ++I  Y + G    E   
Sbjct: 345 VHELMVCNALIDMYSKC---GCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV-FETFD 400

Query: 375 LFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           L   M   +  +  N  T  ++L AC    +      ++ ++++      + + N+ I+ 
Sbjct: 401 LLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAA 460

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+ G +  A   F  +  K++ S+N ++  +A+N +  KA +   E+   G+    ++ 
Sbjct: 461 YAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSI 520

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            SLL     +G +  G++IH  ++++G E N  +  +L+S+Y  C+        F+ M D
Sbjct: 521 VSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFETMGD 580

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           +N + W +M++G++++     AL +F +ML+DG++P+ I   ++L ACS    +  G K 
Sbjct: 581 KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG-KE 639

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
                 ++ +++       ++D+  +SG L  +      +    +V  W   +    VHG
Sbjct: 640 VHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHG 698

Query: 673 DTELGKHAAEMI--LEQDPQDPAAHILLSNLYA 703
               G  A E+   +++  + P     L  L A
Sbjct: 699 Q---GNKAVELFEDMKRSDKQPDRFTFLGVLQA 728


>gi|359485832|ref|XP_002268817.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1736

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 290/795 (36%), Positives = 463/795 (58%), Gaps = 17/795 (2%)

Query: 76   PDLDTYSLLLKSCIRSRNFHLGKLVHSL--LTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
            P+  T+  L+ +   S +F L  L   L  + +S    +  + ++L+S +++ G  ++A 
Sbjct: 278  PNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSSALVSGFARFGLTDDAK 337

Query: 134  KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYC--FSAVIRAC 190
             IF+ MG  R++VS + ++   V + +   A  +F EM +L G   + Y    SA     
Sbjct: 338  NIFEQMG-VRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSDSYVVLLSAFSEFS 396

Query: 191  SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
               E    G  ++  +++ G  D+ V +G  L++M+ K    +  A  VF+ M EK++V 
Sbjct: 397  VLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAKSGA-IADACSVFELMVEKDSVS 455

Query: 251  WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
            W  +I+   Q  C  DA   F  M  +G +P  FTL   +S+C+ L     G+Q+H   +
Sbjct: 456  WNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGL 515

Query: 311  RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
            + GL  DV V  +L+ +YA+    G   +  KVF  M +++ +SW ++I     S     
Sbjct: 516  KLGLDTDVSVSNALLALYAET---GCFTECLKVFSLMPEYDQVSWNSVIGALSDSEASVS 572

Query: 371  EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
            +AVK F  M++G    +  TF ++L A  +L    V+ Q++   +K   + D  +GN+L+
Sbjct: 573  QAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSDDTAIGNALL 632

Query: 431  SMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
            S Y + G M +  K F  + E ++ VS+N+M+  Y  N    KA +L+  +   G    +
Sbjct: 633  SCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDS 692

Query: 490  YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            +TFA++LS  +S+  + +G ++HA  I++  ES+  + +AL+ MYS+C  ++ A + F+ 
Sbjct: 693  FTFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKCGRIDYASRFFEL 752

Query: 550  MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
            M  RNV SW SMI+G+A+HG   +AL++F +M+ DG  P+ +T++ VLSACSH G + EG
Sbjct: 753  MPLRNVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPPDHVTFVGVLSACSHVGFVEEG 812

Query: 610  WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA-C 668
            ++HF+SM + + +  R+EH++CMVDLLGR+G L E  +FI SMP+  +VL+WRT LGA C
Sbjct: 813  FEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRTVLGACC 872

Query: 669  RVHG-DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
            R +G +TELG+ AAEM+LE +PQ+   ++LL+N+YAS   WE VA  R  MKE  + KEA
Sbjct: 873  RANGRNTELGRRAAEMLLELEPQNAVNYVLLANMYASGEKWEDVAKARTAMKEAAVKKEA 932

Query: 728  GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
            GCSW+   + VH F  G+  HP+   IY +L +L  K+++ GY+P T + L +LE E K 
Sbjct: 933  GCSWVTMKDGVHVFVAGDKLHPEKDLIYDKLRELNRKMRDAGYIPQTKYALFDLELENKE 992

Query: 788  QYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT--GREIVLRDSN 845
            + L  HSEKIAVAF L   S + PIR+ KNLRVCGDCH+A  YIS +     ++ ++ SN
Sbjct: 993  ELLSYHSEKIAVAFVLTRQS-ALPIRIMKNLRVCGDCHSAFGYISKIIFFFLKMAMKPSN 1051

Query: 846  RFHHIKDGKCSCNDY 860
                I+  +C C D+
Sbjct: 1052 NI-WIRRQQCPCGDW 1065



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 188/681 (27%), Positives = 339/681 (49%), Gaps = 40/681 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRS--RNFHLGKLVHSLLTRSKLE 110
           +  +G+  +A      M + G  P+   +   L++C  S      LG  +H L+++++  
Sbjct: 147 YTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISKTRYG 206

Query: 111 PNSVILNSLISLYSKCGD-LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            + V+ N LIS+Y  C D  N+A  +F  +G  R+ +SW+S+IS Y  RG  V A  +F 
Sbjct: 207 SDVVVCNVLISMYGSCLDSANDARSVFDGIG-IRNSISWNSIISVYSRRGDAVSAYDLFS 265

Query: 170 EM----LELGFCPNEYCFSAVI-RACSNTE-NVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
            M    L   F PNEY F ++I  ACS+ +  + +   +   + K G+   D+ V  AL+
Sbjct: 266 SMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQ-DLYVSSALV 324

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPD 282
             F +  +  + A  +F++M  +N V    ++    +      A ++F +M  L G   D
Sbjct: 325 SGFARFGLT-DDAKNIFEQMGVRNVVSMNGLMVGLVKQKQGEAAAKVFHEMKDLVGINSD 383

Query: 283 RFTLSGVVSACSELELFTS----GKQLHSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSV 337
            + +  ++SA SE  +       G+++H+  IRTGL  + V +G  LV+MYAK    G++
Sbjct: 384 SYVV--LLSAFSEFSVLEEGRRKGREVHAHVIRTGLNDNKVAIGNGLVNMYAK---SGAI 438

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            D+  VF+ M++ + +SW ++I+G  Q+   + +A + F  M +    P++FT  S L +
Sbjct: 439 ADACSVFELMVEKDSVSWNSLISGLDQNECSE-DAAESFHRMRRTGSMPSNFTLISTLSS 497

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L    + EQ++   +K G   D  V N+L+++YA +G   +  K F  + E + VS+
Sbjct: 498 CASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQVSW 557

Query: 458 NTMVDAYAKNLNS-EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           N+++ A + +  S  +A +   ++   G G S  TF ++LS  SS+       QIHA ++
Sbjct: 558 NSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVL 617

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARAL 575
           K     +  I NAL+S Y +C  +    ++F  M E R+ +SW SMI+G+  +    +A+
Sbjct: 618 KYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAM 677

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK----HFRSMYDEHGIVQRMEHYAC 631
           ++ + M+  G + +  T+  +LSAC+    +  G +      R+  +   +V      + 
Sbjct: 678 DLVWFMMQKGQRLDSFTFATILSACASVATLERGMEVHACGIRACLESDVVVG-----SA 732

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG-KHAAEMILEQDPQ 690
           +VD+  + G +  A  F   MPL  +V  W + +     HG  E   K    M+L+  P 
Sbjct: 733 LVDMYSKCGRIDYASRFFELMPLR-NVYSWNSMISGYARHGHGEKALKLFTRMMLDGQPP 791

Query: 691 DPAAHILLSNLYASAGHWEYV 711
           D   H+    + ++  H  +V
Sbjct: 792 D---HVTFVGVLSACSHVGFV 809



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 168/593 (28%), Positives = 296/593 (49%), Gaps = 32/593 (5%)

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
           +R  HL  + +  +       N  + N+LI++Y + GDL  A K+F  M N R++V+W+ 
Sbjct: 90  ARELHLQSIKYGFVG------NLFLSNTLINIYVRIGDLGSAQKLFDEMSN-RNLVTWAC 142

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC--SNTENVAIGHIIYGFLLK 208
           +IS Y   GK  +A   F +M+  GF PN Y F + +RAC  S      +G  I+G + K
Sbjct: 143 LISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKLGVQIHGLISK 202

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
             Y  SDV V   LI M+         A  VFD +  +N++ W  +I+  ++ G    A 
Sbjct: 203 TRY-GSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYSRRGDAVSAY 261

Query: 269 RLFLDMILSG----FLPDRFTLSGVV-SACSELEL-FTSGKQLHSWAIRTGLALDVCVGC 322
            LF  M   G    F P+ +T   ++ +ACS ++      +Q+ +   ++G   D+ V  
Sbjct: 262 DLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSGFLQDLYVSS 321

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +LV  +A+    G  DD++ +F++M   NV+S   ++ G V+   + + A K+F +M + 
Sbjct: 322 ALVSGFARF---GLTDDAKNIFEQMGVRNVVSMNGLMVGLVKQ-KQGEAAAKVFHEM-KD 376

Query: 383 QVAPNHFTFASVLKACG--NLLDS--NVAEQVYTHAVKRGRALDD---CVGNSLISMYAR 435
            V  N  ++  +L A    ++L+       +V+ H ++ G  L+D    +GN L++MYA+
Sbjct: 377 LVGINSDSYVVLLSAFSEFSVLEEGRRKGREVHAHVIRTG--LNDNKVAIGNGLVNMYAK 434

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
           SG + DA   FE + EK+ VS+N+++    +N  SE A E  H +  TG   S +T  S 
Sbjct: 435 SGAIADACSVFELMVEKDSVSWNSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLIST 494

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           LS  +S+G I  GEQIH   +K G +++  + NAL+++Y+         +VF  M + + 
Sbjct: 495 LSSCASLGWIMLGEQIHCDGLKLGLDTDVSVSNALLALYAETGCFTECLKVFSLMPEYDQ 554

Query: 556 ISWTSMITGFA-KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           +SW S+I   +      ++A++ F +M+  G   + +T+I +LSA S   L  E      
Sbjct: 555 VSWNSVIGALSDSEASVSQAVKYFLQMMRGGWGLSRVTFINILSAVSSLSL-HEVSHQIH 613

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           ++  ++ +         ++   G+ G + E  +    M  + D + W + +  
Sbjct: 614 ALVLKYCLSDDTAIGNALLSCYGKCGEMNECEKIFARMSETRDEVSWNSMISG 666



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 224/447 (50%), Gaps = 23/447 (5%)

Query: 48  NRLIYHLNDGRV-QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N LI  L+     + A  +   M + G+ P   T    L SC       LG+ +H    +
Sbjct: 457 NSLISGLDQNECSEDAAESFHRMRRTGSMPSNFTLISTLSSCASLGWIMLGEQIHCDGLK 516

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV-DAI 165
             L+ +  + N+L++LY++ G   E  K+F S+  + D VSW+S+I +  +    V  A+
Sbjct: 517 LGLDTDVSVSNALLALYAETGCFTECLKVF-SLMPEYDQVSWNSVIGALSDSEASVSQAV 575

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
             F++M+  G+  +   F  ++ A S+     + H I+  +LK    D D  +G AL+  
Sbjct: 576 KYFLQMMRGGWGLSRVTFINILSAVSSLSLHEVSHQIHALVLKYCLSD-DTAIGNALLSC 634

Query: 226 FVKGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           + K   ++    K+F +M+E ++ V W  MI+          A+ L   M+  G   D F
Sbjct: 635 YGKCG-EMNECEKIFARMSETRDEVSWNSMISGYIHNELLHKAMDLVWFMMQKGQRLDSF 693

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T + ++SAC+ +     G ++H+  IR  L  DV VG +LVDMY+KC   G +D + + F
Sbjct: 694 TFATILSACASVATLERGMEVHACGIRACLESDVVVGSALVDMYSKC---GRIDYASRFF 750

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           + M   NV SW ++I+GY + G  +K A+KLF+ M+     P+H TF  VL AC ++   
Sbjct: 751 ELMPLRNVYSWNSMISGYARHGHGEK-ALKLFTRMMLDGQPPDHVTFVGVLSACSHV--- 806

Query: 405 NVAEQVYTH--AVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNT 459
              E+ + H  ++     L   V   + ++ +  R+G++++      S+  + N++ + T
Sbjct: 807 GFVEEGFEHFKSMSEVYRLSPRVEHFSCMVDLLGRAGKLDEVGDFINSMPMKPNVLIWRT 866

Query: 460 MVDA--YAKNLNSE---KAFELLHEIE 481
           ++ A   A   N+E   +A E+L E+E
Sbjct: 867 VLGACCRANGRNTELGRRAAEMLLELE 893



 Score = 99.4 bits (246), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 129/271 (47%), Gaps = 8/271 (2%)

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           TF S++        S  A +++  ++K G   +  + N+LI++Y R G +  A+K F+ +
Sbjct: 73  TFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLGSAQKLFDEM 132

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG--K 507
             +NLV++  ++  Y +N   ++A     ++   G   + Y F S L      G  G   
Sbjct: 133 SNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQESGPSGCKL 192

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCAN-VEAAFQVFKEMEDRNVISWTSMITGFA 566
           G QIH  I K+ + S+  + N LISMY  C +    A  VF  +  RN ISW S+I+ ++
Sbjct: 193 GVQIHGLISKTRYGSDVVVCNVLISMYGSCLDSANDARSVFDGIGIRNSISWNSIISVYS 252

Query: 567 KHGFAARALEIFYKMLADGI----KPNGITYIAVL-SACSHAGLISEGWKHFRSMYDEHG 621
           + G A  A ++F  M  +G+    KPN  T+ +++ +ACS         +   +  ++ G
Sbjct: 253 RRGDAVSAYDLFSSMQKEGLGFSFKPNEYTFGSLITTACSSVDFGLCVLEQMLARVEKSG 312

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            +Q +   + +V    R G   +A      M
Sbjct: 313 FLQDLYVSSALVSGFARFGLTDDAKNIFEQM 343



 Score = 73.2 bits (178), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 37/123 (30%), Positives = 68/123 (55%)

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           +T + +S+ TF SL++         +  ++H + IK GF  N  + N LI++Y R  ++ 
Sbjct: 64  NTTLFSSSETFESLINRYQGSCCSEEARELHLQSIKYGFVGNLFLSNTLINIYVRIGDLG 123

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           +A ++F EM +RN+++W  +I+G+ ++G    A   F  M+  G  PN   + + L AC 
Sbjct: 124 SAQKLFDEMSNRNLVTWACLISGYTQNGKPDEACARFRDMVRAGFIPNHYAFGSALRACQ 183

Query: 602 HAG 604
            +G
Sbjct: 184 ESG 186


>gi|356553444|ref|XP_003545066.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950-like [Glycine max]
          Length = 1033

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 267/764 (34%), Positives = 455/764 (59%), Gaps = 12/764 (1%)

Query: 104  LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
            + +S    +  + ++L+S +++ G ++ A  IF+ M + R+ V+ + ++     + +  +
Sbjct: 276  IEKSSFVKDLYVGSALVSGFARYGLIDSAKMIFEQM-DDRNAVTMNGLMVGLARQHQGEE 334

Query: 164  AIHMFVEM---LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
            A  +F EM   +E+         SA     +  E    G  ++ +L++    D  + +G 
Sbjct: 335  AAKIFKEMKDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWILIGN 394

Query: 221  ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
            AL++++ K +  +++A  +F  M  K+TV W  +I+         +A+  F  M  +G +
Sbjct: 395  ALVNLYAKCNA-IDNARSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMV 453

Query: 281  PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
            P +F++   +S+C+ L     G+Q+H   I+ GL LDV V  +L+ +YA+      +++ 
Sbjct: 454  PSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDC---MEEY 510

Query: 341  RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            +KVF  M +++ +SW + I     S     +A+K F +M+Q    PN  TF ++L A  +
Sbjct: 511  QKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSS 570

Query: 401  LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNT 459
            L    +  Q++   +K   A D+ + N+L++ Y +  +MED    F  + E+ + VS+N 
Sbjct: 571  LSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNA 630

Query: 460  MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            M+  Y  N    KA  L+  +   G     +T A++LS  +S+  + +G ++HA  I++ 
Sbjct: 631  MISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRAC 690

Query: 520  FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             E+   + +AL+ MY++C  ++ A + F+ M  RN+ SW SMI+G+A+HG   +AL++F 
Sbjct: 691  LEAEVVVGSALVDMYAKCGKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGKALKLFT 750

Query: 580  KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            +M   G  P+ +T++ VLSACSH GL+ EG++HF+SM + + +  R+EH++CMVDLLGR+
Sbjct: 751  QMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRA 810

Query: 640  GSLTEALEFIRSMPLSADVLVWRTFLGA-CRVHG-DTELGKHAAEMILEQDPQDPAAHIL 697
            G + +  EFI++MP++ + L+WRT LGA CR +  +TELG+ AA+M++E +P +   ++L
Sbjct: 811  GDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKMLIELEPLNAVNYVL 870

Query: 698  LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
            LSN++A+ G WE V   R  M+   + KEAGCSW+   + VH F  G+ +HP+  +IY +
Sbjct: 871  LSNMHAAGGKWEDVEEARLAMRNAEVKKEAGCSWVTMKDGVHVFVAGDQTHPEKEKIYDK 930

Query: 758  LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            L ++  K+++ GY+P+T + L++LE E K + L  HSEK+A+AF L   S+  PIR+ KN
Sbjct: 931  LKEIMNKMRDLGYVPETKYALYDLELENKEELLSYHSEKLAIAFVLTRQSE-LPIRIIKN 989

Query: 818  LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            LRVCGDCHTA KYIS +  R+I+LRDSNRFHH   G CSC DYW
Sbjct: 990  LRVCGDCHTAFKYISNIVNRQIILRDSNRFHHFDGGICSCQDYW 1033



 Score =  219 bits (557), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 168/600 (28%), Positives = 305/600 (50%), Gaps = 42/600 (7%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKC-GDLNEANKIFKSMGNKRDIVSWSSMISS 154
           LG  +H L+++S    + V+ N L+S+YS C   +++A ++F+ +  K    SW+S+IS 
Sbjct: 160 LGMEIHGLISKSPYASDMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTS-ASWNSIISV 218

Query: 155 YVNRGKQVDAIHMFVEM----LELGFCPNEYCF-SAVIRACSNTE-NVAIGHIIYGFLLK 208
           Y  RG  + A  +F  M     EL   PNEY F S V  ACS  +  + +   +   + K
Sbjct: 219 YCRRGDAISAFKLFSSMQREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEK 278

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
              F  D+ VG AL+  F +  + ++SA  +F++M ++N V    ++    +     +A 
Sbjct: 279 SS-FVKDLYVGSALVSGFARYGL-IDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAA 336

Query: 269 RLFLDMILSGFLPDRFTLSG-----VVSACSELELFTSGK----QLHSWAIRTGLA-LDV 318
           ++F +M       D   ++      ++SA +E      GK    ++H++ IR  L  + +
Sbjct: 337 KIFKEM------KDLVEINASSYAVLLSAFTEFSNLKEGKRKGQEVHAYLIRNALVDVWI 390

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +G +LV++YAKC    ++D++R +F  M   + +SW +II+G +    R +EAV  F  
Sbjct: 391 LIGNALVNLYAKCN---AIDNARSIFQLMPSKDTVSWNSIISG-LDHNERFEEAVACFHT 446

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M +  + P+ F+  S L +C +L    + +Q++   +K G  LD  V N+L+++YA +  
Sbjct: 447 MRRNGMVPSKFSVISTLSSCASLGWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDC 506

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE-KAFELLHEIEDTGVGTSAYTFASLLS 497
           ME+ +K F  + E + VS+N+ + A A +  S  +A +   E+   G   +  TF ++LS
Sbjct: 507 MEEYQKVFFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILS 566

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVI 556
             SS+  +  G QIHA I+K     ++ I N L++ Y +C  +E    +F  M E R+ +
Sbjct: 567 AVSSLSLLELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEV 626

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK----H 612
           SW +MI+G+  +G   +A+ + + M+  G + +  T   VLSAC+    +  G +     
Sbjct: 627 SWNAMISGYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACA 686

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            R+  +   +V      + +VD+  + G +  A  F   MP+  ++  W + +     HG
Sbjct: 687 IRACLEAEVVVG-----SALVDMYAKCGKIDYASRFFELMPVR-NIYSWNSMISGYARHG 740



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/467 (28%), Positives = 245/467 (52%), Gaps = 20/467 (4%)

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           SDV     L+++FV+   +L SA K+FD+M +KN V W+ +++   Q G P +A  LF  
Sbjct: 72  SDVFWCNTLVNIFVRAG-NLVSAQKLFDEMPQKNLVSWSCLVSGYAQNGMPDEACMLFRG 130

Query: 274 MILSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           +I +G LP+ + +   + AC EL   +   G ++H    ++  A D+ +   L+ MY+ C
Sbjct: 131 IISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDMVLSNVLMSMYSHC 190

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM----IQGQVAPN 387
           +   S+DD+R+VF+ +      SW +II+ Y + G     A KLFS M     +    PN
Sbjct: 191 S--ASIDDARRVFEEIKMKTSASWNSIISVYCRRGDA-ISAFKLFSSMQREATELNCRPN 247

Query: 388 HFTFASVLKACGNLLDSNVA--EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            +TF S++    +L+D  +   EQ+     K     D  VG++L+S +AR G ++ A+  
Sbjct: 248 EYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARYGLIDSAKMI 307

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           FE + ++N V+ N ++   A+    E+A ++  E++D  V  +A ++A LLS  +    +
Sbjct: 308 FEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEMKDL-VEINASSYAVLLSAFTEFSNL 366

Query: 506 G----KGEQIHARIIKSGF-ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
                KG+++HA +I++   +    I NAL+++Y++C  ++ A  +F+ M  ++ +SW S
Sbjct: 367 KEGKRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARSIFQLMPSKDTVSWNS 426

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I+G   +     A+  F+ M  +G+ P+  + I+ LS+C+  G I  G +       + 
Sbjct: 427 IISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWIMLG-QQIHGEGIKC 485

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           G+   +     ++ L   +  + E  +    MP   D + W +F+GA
Sbjct: 486 GLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP-EYDQVSWNSFIGA 531



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 139/515 (26%), Positives = 265/515 (51%), Gaps = 29/515 (5%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  + ++ L  +    N+L++++ + G+L  A K+F  M  K ++VSWS ++S Y   G
Sbjct: 61  LHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQK-NLVSWSCLVSGYAQNG 119

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN--TENVAIGHIIYGFLLKCGYFDSDVC 217
              +A  +F  ++  G  PN Y   + +RAC       + +G  I+G + K  Y  SD+ 
Sbjct: 120 MPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPY-ASDMV 178

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           +   L+ M+   S  ++ A +VF+++  K +  W  +I+   + G    A +LF  M   
Sbjct: 179 LSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQRE 238

Query: 278 GF----LPDRFTLSGVVS-ACSELEL-FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
                  P+ +T   +V+ ACS ++   T  +Q+ +   ++    D+ VG +LV  +A+ 
Sbjct: 239 ATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGFARY 298

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +D ++ +F++M D N ++   ++ G  +   + +EA K+F +M +  V  N  ++
Sbjct: 299 ---GLIDSAKMIFEQMDDRNAVTMNGLMVGLARQ-HQGEEAAKIFKEM-KDLVEINASSY 353

Query: 392 ASVLKACGNLLDSNVAE------QVYTHAVKRGRALDDC---VGNSLISMYARSGRMEDA 442
           A +L A      SN+ E      +V+ + ++   AL D    +GN+L+++YA+   +++A
Sbjct: 354 AVLLSAFTEF--SNLKEGKRKGQEVHAYLIR--NALVDVWILIGNALVNLYAKCNAIDNA 409

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R  F+ +  K+ VS+N+++     N   E+A    H +   G+  S ++  S LS  +S+
Sbjct: 410 RSIFQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASL 469

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           G I  G+QIH   IK G + +  + NAL+++Y+    +E   +VF  M + + +SW S I
Sbjct: 470 GWIMLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMPEYDQVSWNSFI 529

Query: 563 TGFA-KHGFAARALEIFYKMLADGIKPNGITYIAV 596
              A       +A++ F +M+  G KPN +T+I +
Sbjct: 530 GALATSEASVLQAIKYFLEMMQAGWKPNRVTFINI 564



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 114/369 (30%), Positives = 183/369 (49%), Gaps = 10/369 (2%)

Query: 36  FIAQPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P+      N +I  L+ + R ++A+     M + G  P   +    L SC      
Sbjct: 413 FQLMPSKDTVSWNSIISGLDHNERFEEAVACFHTMRRNGMVPSKFSVISTLSSCASLGWI 472

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            LG+ +H    +  L+ +  + N+L++LY++   + E  K+F  M  + D VSW+S I +
Sbjct: 473 MLGQQIHGEGIKCGLDLDVSVSNALLTLYAETDCMEEYQKVFFLMP-EYDQVSWNSFIGA 531

Query: 155 YVNRGKQV-DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
                  V  AI  F+EM++ G+ PN   F  ++ A S+   + +G  I+  +LK    D
Sbjct: 532 LATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSLLELGRQIHALILKHSVAD 591

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFL 272
            +      L   F      +E    +F +M+E ++ V W  MI+     G    A+ L  
Sbjct: 592 DNAIENTLL--AFYGKCEQMEDCEIIFSRMSERRDEVSWNAMISGYIHNGILHKAMGLVW 649

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M+  G   D FTL+ V+SAC+ +     G ++H+ AIR  L  +V VG +LVDMYAKC 
Sbjct: 650 LMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIRACLEAEVVVGSALVDMYAKC- 708

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G +D + + F+ M   N+ SW ++I+GY + G   K A+KLF+ M Q    P+H TF 
Sbjct: 709 --GKIDYASRFFELMPVRNIYSWNSMISGYARHGHGGK-ALKLFTQMKQHGQLPDHVTFV 765

Query: 393 SVLKACGNL 401
            VL AC ++
Sbjct: 766 GVLSACSHV 774



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 110/378 (29%), Positives = 194/378 (51%), Gaps = 25/378 (6%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           QLH    +TGL  DV    +LV+++ +    G++  ++K+FD M   N++SW+ +++GY 
Sbjct: 60  QLHLQIYKTGLTSDVFWCNTLVNIFVRA---GNLVSAQKLFDEMPQKNLVSWSCLVSGYA 116

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV--KRGRAL 421
           Q+G  D EA  LF  +I   + PNH+   S L+AC  L  + +   +  H +  K   A 
Sbjct: 117 QNGMPD-EACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYAS 175

Query: 422 DDCVGNSLISMYAR-SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL--- 477
           D  + N L+SMY+  S  ++DAR+ FE +  K   S+N+++  Y +  ++  AF+L    
Sbjct: 176 DMVLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSM 235

Query: 478 -HEIEDTGVGTSAYTFASLLSGASSIGAIGKG--EQIHARIIKSGFESNHCIYNALISMY 534
             E  +     + YTF SL++ A S+   G    EQ+ ARI KS F  +  + +AL+S +
Sbjct: 236 QREATELNCRPNEYTFCSLVTVACSLVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSGF 295

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           +R   +++A  +F++M+DRN ++   ++ G A+      A +IF K + D ++ N  +Y 
Sbjct: 296 ARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIF-KEMKDLVEINASSYA 354

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY-------ACMVDLLGRSGSLTEALE 647
            +LSA +    + EG    R   + H  + R             +V+L  +  ++  A  
Sbjct: 355 VLLSAFTEFSNLKEG---KRKGQEVHAYLIRNALVDVWILIGNALVNLYAKCNAIDNARS 411

Query: 648 FIRSMPLSADVLVWRTFL 665
             + MP S D + W + +
Sbjct: 412 IFQLMP-SKDTVSWNSII 428



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 93/350 (26%), Positives = 166/350 (47%), Gaps = 11/350 (3%)

Query: 36  FIAQPTTSEPLSNRLIYHL--NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F   P   +   N  I  L  ++  V +AI     M Q G  P+  T+  +L +      
Sbjct: 514 FFLMPEYDQVSWNSFIGALATSEASVLQAIKYFLEMMQAGWKPNRVTFINILSAVSSLSL 573

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
             LG+ +H+L+ +  +  ++ I N+L++ Y KC  + +   IF  M  +RD VSW++MIS
Sbjct: 574 LELGRQIHALILKHSVADDNAIENTLLAFYGKCEQMEDCEIIFSRMSERRDEVSWNAMIS 633

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            Y++ G    A+ +   M++ G   +++  + V+ AC++   +  G  ++   ++    +
Sbjct: 634 GYIHNGILHKAMGLVWLMMQKGQRLDDFTLATVLSACASVATLERGMEVHACAIR-ACLE 692

Query: 214 SDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           ++V VG AL+DM+ K G +D  S +  F+ M  +N   W  MI+   + G    A++LF 
Sbjct: 693 AEVVVGSALVDMYAKCGKIDYASRF--FELMPVRNIYSWNSMISGYARHGHGGKALKLFT 750

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            M   G LPD  T  GV+SACS + L   G +   S      LA  +     +VD+  + 
Sbjct: 751 QMKQHGQLPDHVTFVGVLSACSHVGLVDEGFEHFKSMGEVYELAPRIEHFSCMVDLLGRA 810

Query: 332 TVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
              G V    +    M ++ N + W  I+    ++  R+ E  +  + M+
Sbjct: 811 ---GDVKKLEEFIKTMPMNPNALIWRTILGACCRANSRNTELGRRAAKML 857



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/288 (27%), Positives = 139/288 (48%), Gaps = 14/288 (4%)

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           A Q++    K G   D    N+L++++ R+G +  A+K F+ + +KNLVS++ +V  YA+
Sbjct: 58  AHQLHLQIYKTGLTSDVFWCNTLVNIFVRAGNLVSAQKLFDEMPQKNLVSWSCLVSGYAQ 117

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA--IGKGEQIHARIIKSGFESNH 524
           N   ++A  L   I   G+  + Y   S L     +G   +  G +IH  I KS + S+ 
Sbjct: 118 NGMPDEACMLFRGIISAGLLPNHYAIGSALRACQELGPNMLKLGMEIHGLISKSPYASDM 177

Query: 525 CIYNALISMYSRC-ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
            + N L+SMYS C A+++ A +VF+E++ +   SW S+I+ + + G A  A ++F  M  
Sbjct: 178 VLSNVLMSMYSHCSASIDDARRVFEEIKMKTSASWNSIISVYCRRGDAISAFKLFSSMQR 237

Query: 584 DGI----KPNGITYIAVLS-ACSHAGLISEGWKHFRSMY---DEHGIVQRMEHYACMVDL 635
           +      +PN  T+ ++++ ACS   L+  G      M    ++   V+ +   + +V  
Sbjct: 238 EATELNCRPNEYTFCSLVTVACS---LVDCGLTLLEQMLARIEKSSFVKDLYVGSALVSG 294

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             R G +  A      M     V +    +G  R H   E  K   EM
Sbjct: 295 FARYGLIDSAKMIFEQMDDRNAVTMNGLMVGLARQHQGEEAAKIFKEM 342


>gi|147772562|emb|CAN67343.1| hypothetical protein VITISV_038220 [Vitis vinifera]
          Length = 732

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 265/725 (36%), Positives = 432/725 (59%), Gaps = 9/725 (1%)

Query: 55  NDGRVQKAIFT-LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           ++G  ++A+   +DL  + G HP+    + ++++C +      G  +H  + RS  + + 
Sbjct: 13  DEGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDV 72

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  SLI  YSK GB+  A  +F  +  K   V+W+++I+ Y   G+   ++ +F +M E
Sbjct: 73  YVGTSLIDFYSKNGBIEVARLVFDQLLEK-TAVTWTTIIAGYTKCGRSXVSLELFAQMRE 131

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
               P+ Y  S+V+ ACS  E +  G  I+ ++L+ G  + DV V   LID + K +  +
Sbjct: 132 TNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT-EMDVSVVNVLIDFYTKCN-RV 189

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           ++  K+FD+M  KN + WT MI+   Q     +A++LF +M   G+ PD F  + V+++C
Sbjct: 190 KAGRKLFDQMVVKNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSC 249

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             LE    G+Q+H++ I+  L  +  V   L+DMYAK  +   + D++KVFD M + NV+
Sbjct: 250 GSLEALEQGRQVHAYTIKANLESNEFVKNGLIDMYAKSNL---LXDAKKVFDVMAEQNVI 306

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           S+ A+I GY  S  +  EA++LF +M      P+  TF S+L    +L    +++Q++  
Sbjct: 307 SYNAMIEGY-SSQEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGL 365

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K G +LD   G++LI +Y++   ++DAR  FE + EK++V +N M   Y ++L +E+A
Sbjct: 366 IIKXGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEA 425

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +L   ++ +    + +TFA+L++ AS++ ++  G+Q H +++K G +    + NAL+ M
Sbjct: 426 LKLYSTLQFSRQKPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDM 485

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C ++E A ++F     R+V+ W SMI+  A+HG A  AL +F +M+ +GI+PN +T+
Sbjct: 486 YAKCGSIEEARKMFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTF 545

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           +AVLSACSHAG + +G  HF SM    GI    EHYAC+V LLGRSG L EA EFI  MP
Sbjct: 546 VAVLSACSHAGXVEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMP 604

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           +    +VWR+ L ACR+ G+ ELGK+AAEM +  DP+D  ++ILLSN++AS G W  V  
Sbjct: 605 IEPAAIVWRSLLSACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKK 664

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +R RM    ++KE G SWIE +NKV+ F    T+H +   I + LD L   IK  GY+PD
Sbjct: 665 VRDRMDSSEVVKEPGRSWIEVNNKVNVFIARXTTHREADMIGSVLDILIQHIKGAGYVPD 724

Query: 774 TNFVL 778
              +L
Sbjct: 725 ATALL 729


>gi|225438557|ref|XP_002276001.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Vitis vinifera]
          Length = 825

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 264/713 (37%), Positives = 427/713 (59%), Gaps = 9/713 (1%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           +DL  + G HP+    + ++++C +      G  +H  + RS  + +  +  SLI  YSK
Sbjct: 117 VDLQRKSGEHPNEFVLASVIRACTQLGVVEKGAQLHGFVVRSGFDQDVYVGTSLIDFYSK 176

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
            G++ EA  +F  +  K   V+W+++I+ Y   G+   ++ +F +M E    P+ Y  S+
Sbjct: 177 NGNIEEARLVFDQLSEK-TAVTWTTIIAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSS 235

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+ ACS  E +  G  I+ ++L+ G  + DV V   LID + K +  +++  K+FD+M  
Sbjct: 236 VLSACSMLEFLEGGKQIHAYVLRRGT-EMDVSVVNVLIDFYTKCN-RVKAGRKLFDQMVV 293

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN + WT MI+   Q     +A++LF +M   G+ PD F  + V+++C   E    G+Q+
Sbjct: 294 KNIISWTTMISGYMQNSFDWEAMKLFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQV 353

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H++ I+  L  D  V   L+DMYAK  +   + D++KVFD M + NV+S+ A+I GY  S
Sbjct: 354 HAYTIKANLESDEFVKNGLIDMYAKSNL---LIDAKKVFDVMAEQNVISYNAMIEGY-SS 409

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
             +  EA++LF +M      P+  TF S+L    +L    +++Q++   +K G +LD   
Sbjct: 410 QEKLSEALELFHEMRVRLFPPSLLTFVSLLGVSASLFALELSKQIHGLIIKFGVSLDLFA 469

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
           G++LI +Y++   ++DAR  FE + EK++V +N M   Y ++L +E+A +L   ++ +  
Sbjct: 470 GSALIDVYSKCSYVKDARHVFEEMNEKDIVVWNAMFFGYTQHLENEEALKLYSTLQFSRQ 529

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             + +TFA+L++ AS++ ++  G+Q H +++K G +    + NAL+ MY++C ++E A +
Sbjct: 530 KPNEFTFAALITAASNLASLRHGQQFHNQLVKMGLDFCPFVTNALVDMYAKCGSIEEARK 589

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F     R+V+ W SMI+  A+HG A  AL +F +M+ +GI+PN +T++AVLSACSHAG 
Sbjct: 590 MFNSSIWRDVVCWNSMISTHAQHGEAEEALGMFREMMKEGIQPNYVTFVAVLSACSHAGR 649

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + +G  HF SM    GI    EHYAC+V LLGRSG L EA EFI  MP+    +VWR+ L
Sbjct: 650 VEDGLNHFNSM-PGFGIKPGTEHYACVVSLLGRSGKLFEAKEFIEKMPIEPAAIVWRSLL 708

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
            ACR+ G+ ELGK+AAEM +  DP+D  ++ILLSN++AS G W  V  +R RM    ++K
Sbjct: 709 SACRIAGNVELGKYAAEMAISTDPKDSGSYILLSNIFASKGMWADVKKVRDRMDSSEVVK 768

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           E G SWIE +NKV+ F   +T+H +  +I + LD L   IK  GY+PD   +L
Sbjct: 769 EPGRSWIEVNNKVNVFIARDTTH-READIGSVLDILIQHIKGAGYVPDATALL 820



 Score =  345 bits (884), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 204/601 (33%), Positives = 339/601 (56%), Gaps = 10/601 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P    ++ LL+  I        K++H  +  S L+ ++ + N LI++ SK   ++ A  +
Sbjct: 25  PKRREFANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVV 84

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTE 194
           F  M +K ++++WSSM+S Y  +G   +A+ +FV++  + G  PNE+  ++VIRAC+   
Sbjct: 85  FDKMPHK-NLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLG 143

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
            V  G  ++GF+++ G FD DV VG +LID + K   ++E A  VFD+++EK  V WT +
Sbjct: 144 VVEKGAQLHGFVVRSG-FDQDVYVGTSLIDFYSKNG-NIEEARLVFDQLSEKTAVTWTTI 201

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I   T+ G    ++ LF  M  +  +PDR+ +S V+SACS LE    GKQ+H++ +R G 
Sbjct: 202 IAGYTKCGRSAVSLELFAQMRETNVVPDRYVVSSVLSACSMLEFLEGGKQIHAYVLRRGT 261

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            +DV V   L+D Y KC     V   RK+FD+M+  N++SWT +I+GY+Q+   D EA+K
Sbjct: 262 EMDVSVVNVLIDFYTKCN---RVKAGRKLFDQMVVKNIISWTTMISGYMQN-SFDWEAMK 317

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +M +    P+ F   SVL +CG+        QV+ + +K     D+ V N LI MYA
Sbjct: 318 LFGEMNRLGWKPDGFACTSVLTSCGSREALEQGRQVHAYTIKANLESDEFVKNGLIDMYA 377

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           +S  + DA+K F+ + E+N++SYN M++ Y+      +A EL HE+       S  TF S
Sbjct: 378 KSNLLIDAKKVFDVMAEQNVISYNAMIEGYSSQEKLSEALELFHEMRVRLFPPSLLTFVS 437

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           LL  ++S+ A+   +QIH  IIK G   +    +ALI +YS+C+ V+ A  VF+EM +++
Sbjct: 438 LLGVSASLFALELSKQIHGLIIKFGVSLDLFAGSALIDVYSKCSYVKDARHVFEEMNEKD 497

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           ++ W +M  G+ +H     AL+++  +     KPN  T+ A+++A S+   +  G + F 
Sbjct: 498 IVVWNAMFFGYTQHLENEEALKLYSTLQFSRQKPNEFTFAALITAASNLASLRHG-QQFH 556

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           +   + G+         +VD+  + GS+ EA +   S  +  DV+ W + +     HG+ 
Sbjct: 557 NQLVKMGLDFCPFVTNALVDMYAKCGSIEEARKMFNS-SIWRDVVCWNSMISTHAQHGEA 615

Query: 675 E 675
           E
Sbjct: 616 E 616



 Score = 76.3 bits (186), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 52/195 (26%), Positives = 96/195 (49%), Gaps = 8/195 (4%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           FA+LL  + S   I   + IH +II SG +S+  + N LI++ S+   V+ A  VF +M 
Sbjct: 30  FANLLQLSISRNPIIHYKIIHGQIIVSGLQSDTFLANILINVCSKSDRVDNARVVFDKMP 89

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKML-ADGIKPNGITYIAVLSACSHAGLISEGW 610
            +N+I+W+SM++ +++ G++  AL +F  +    G  PN     +V+ AC+  G++ +G 
Sbjct: 90  HKNLITWSSMVSMYSQQGYSEEALMVFVDLQRKSGEHPNEFVLASVIRACTQLGVVEKG- 148

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
                     G  Q +     ++D   ++G++ EA   +         + W T +     
Sbjct: 149 AQLHGFVVRSGFDQDVYVGTSLIDFYSKNGNIEEA-RLVFDQLSEKTAVTWTTIIA---- 203

Query: 671 HGDTELGKHAAEMIL 685
            G T+ G+ A  + L
Sbjct: 204 -GYTKCGRSAVSLEL 217


>gi|359491499|ref|XP_003634283.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
          Length = 766

 Score =  494 bits (1273), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 289/840 (34%), Positives = 453/840 (53%), Gaps = 105/840 (12%)

Query: 23  PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           PS +N P ++S   +A        +  +  H+ +G+   A+   + M ++ +     +++
Sbjct: 31  PSTRNQPKTTSS--LATDADIVKWNIAITNHMRNGQCDSALRLFNSMPRRSSI----SWN 84

Query: 83  LLLKSCIRSRNFHLGK-LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
            ++  C+ +  F+L + L   + TR     + V  N +IS   +  +L  A  +F  M  
Sbjct: 85  AMISGCLSNDKFYLARQLFEKMPTR-----DLVSWNVMISGCVRYRNLRAARLLFDQM-P 138

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +RD+VSW++M+S Y   G   +A  +F EM     C N   ++ ++ A      V  G I
Sbjct: 139 ERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGMLAAY-----VQNGRI 189

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
                L     D ++     ++  +VK +  L  A  +FD+M E++ V W  MI+   Q 
Sbjct: 190 EDARRLFESKADWELISWNCMMGGYVKRN-RLVDARGIFDRMPERDEVSWNTMISGYAQN 248

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   +A RLF +  +     D FT + +VS   +                          
Sbjct: 249 GELLEAQRLFEESPVR----DVFTWTAMVSGYVQ-------------------------- 278

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
                       +G +D++R+VFD M + N +SW AII GYVQ    D +A +LF  M  
Sbjct: 279 ------------NGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKRMD-QARELFEAM-- 323

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
                           C N+                         N++I+ YA++G +  
Sbjct: 324 ---------------PCQNV----------------------SSWNTMITGYAQNGDIAQ 346

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           AR  F+ + +++ +S+  ++  YA++   E+A  L  E++  G   +  TF S LS  + 
Sbjct: 347 ARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAE 406

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           I A+  G+Q+H R++K+G ES   + NAL+ MY +C N++ A+ VF+ +E++ V+SW +M
Sbjct: 407 IAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVFEGIEEKEVVSWNTM 466

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I G+A+HGF   AL +F  M   GI P+ +T + VLSACSH GL+ +G ++F SM  ++G
Sbjct: 467 IAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDKGTEYFYSMTQDYG 526

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           I    +HY CM+DLLGR+G L +A   +++MP   D   W   LGA R+HG+TELG+ AA
Sbjct: 527 ITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAA 586

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           +MI E +P +   ++LLSNLYA++G W  V  +R RM++R + K  G SW+E  NK+H F
Sbjct: 587 KMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVPGYSWVEVQNKIHTF 646

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
            VG++ HP+   IY  L++L LK+K+ GY+  T  VLH++EEE+KV  L  HSEK+AVAF
Sbjct: 647 TVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKVHMLKYHSEKLAVAF 706

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           G+++    +PIRV KNLRVC DCH A+K+IS + GR I+LRDS+RFHH   G+CSC DYW
Sbjct: 707 GILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRFHHFNGGQCSCGDYW 766


>gi|356545843|ref|XP_003541343.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Glycine max]
          Length = 747

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 266/743 (35%), Positives = 427/743 (57%), Gaps = 71/743 (9%)

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N YC   +++ C +T+ +   HII  F       + ++ +   L+  + K    +  A +
Sbjct: 16  NHYC--ELLKHCRDTKKIHC-HIIKAFR------NPEIFLLNNLVSAYAKFD-RITYARR 65

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-----LDMIL----------SGFLP-- 281
           VFD+M ++N   W  +++  ++L C  +  R+F      DM+            GFL   
Sbjct: 66  VFDQMPQRNLYSWNTLLSSYSKLACLPEMERVFHAMPTRDMVSWNSLISAYAGRGFLLQS 125

Query: 282 ---------------DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
                          +R  LS ++   S+      G Q+H   ++ G    V VG  LVD
Sbjct: 126 VKAYNLMLYNGPFNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFGFQSYVFVGSPLVD 185

Query: 327 MYAK-----CTVDG-----------------------SVDDSRKVFDRMLDHNVMSWTAI 358
           MY+K     C                            ++DSR++F  M + + +SWTA+
Sbjct: 186 MYSKTGLVFCARQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAM 245

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I G+ Q+G  D+EA+ LF +M    +  + +TF SVL ACG ++     +QV+ + ++  
Sbjct: 246 IAGFTQNG-LDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTD 304

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              +  VG++L+ MY +   ++ A   F  +  KN+VS+  M+  Y +N  SE+A ++  
Sbjct: 305 YQDNIFVGSALVDMYCKCKSIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFC 364

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++++ G+    +T  S++S  +++ ++ +G Q H R + SG  S   + NAL+++Y +C 
Sbjct: 365 DMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCG 424

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           ++E + ++F EM   + +SWT++++G+A+ G A   L +F  MLA G KP+ +T+I VLS
Sbjct: 425 SIEDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLS 484

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACS AGL+ +G + F SM  EH I+   +HY CM+DL  R+G L EA +FI  MP S D 
Sbjct: 485 ACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDA 544

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           + W + L +CR H + E+GK AAE +L+ +P + A++ILLS++YA+ G WE VAN+RK M
Sbjct: 545 IGWASLLSSCRFHRNMEIGKWAAESLLKLEPHNTASYILLSSIYAAKGKWEEVANLRKGM 604

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           +++ L KE GCSWI+  N+VH F   + S+P + +IY+EL++L  K+ + GY+PD N VL
Sbjct: 605 RDKGLRKEPGCSWIKYKNQVHIFSADDQSNPFSDQIYSELEKLNYKMVQEGYVPDMNSVL 664

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H++++ +K++ L  HSEK+A+AFGLI      PIRV KNLRVCGDCH A KYIS +T RE
Sbjct: 665 HDVDDSEKIKMLNHHSEKLAIAFGLIFIPPGLPIRVVKNLRVCGDCHNATKYISKITQRE 724

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I++RD+ RFH  KDG+CSC D+W
Sbjct: 725 ILVRDAARFHLFKDGRCSCGDFW 747



 Score =  228 bits (581), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 157/499 (31%), Positives = 245/499 (49%), Gaps = 53/499 (10%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG- 175
           N+L+S YSK   L E  ++F +M   RD+VSW+S+IS+Y  RG  + ++  +  ML  G 
Sbjct: 79  NTLLSSYSKLACLPEMERVFHAMPT-RDMVSWNSLISAYAGRGFLLQSVKAYNLMLYNGP 137

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV---- 231
           F  N    S ++   S    V +G  ++G ++K G F S V VG  L+DM+ K  +    
Sbjct: 138 FNLNRIALSTMLILASKQGCVHLGLQVHGHVVKFG-FQSYVFVGSPLVDMYSKTGLVFCA 196

Query: 232 --------------------------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
                                      +E + ++F  M EK+++ WT MI   TQ G  R
Sbjct: 197 RQAFDEMPEKNVVMYNTLIAGLMRCSRIEDSRQLFYDMQEKDSISWTAMIAGFTQNGLDR 256

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           +AI LF +M L     D++T   V++AC  +     GKQ+H++ IRT    ++ VG +LV
Sbjct: 257 EAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIFVGSALV 316

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DMY KC    S+  +  VF +M   NV+SWTA++ GY Q+ G  +EAVK+F DM    + 
Sbjct: 317 DMYCKCK---SIKSAETVFRKMNCKNVVSWTAMLVGYGQN-GYSEEAVKIFCDMQNNGIE 372

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+ FT  SV+ +C NL       Q +  A+  G      V N+L+++Y + G +ED+ + 
Sbjct: 373 PDDFTLGSVISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKCGSIEDSHRL 432

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  +   + VS+  +V  YA+   + +   L   +   G      TF  +LS  S  G +
Sbjct: 433 FSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLV 492

Query: 506 GKGEQIHARIIKSGFESNHCI------YNALISMYSRCANVEAAFQVFKEME-DRNVISW 558
            KG QI   +IK      H I      Y  +I ++SR   +E A +   +M    + I W
Sbjct: 493 QKGNQIFESMIKE-----HRIIPIEDHYTCMIDLFSRAGRLEEARKFINKMPFSPDAIGW 547

Query: 559 TSMITGFAKHGFAARALEI 577
            S+++    H    R +EI
Sbjct: 548 ASLLSSCRFH----RNMEI 562



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 126/408 (30%), Positives = 219/408 (53%), Gaps = 21/408 (5%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E N V+ N+LI+   +C  + ++ ++F  M  ++D +SW++MI+ +   G   +AI +F 
Sbjct: 205 EKNVVMYNTLIAGLMRCSRIEDSRQLFYDM-QEKDSISWTAMIAGFTQNGLDREAIDLFR 263

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           EM       ++Y F +V+ AC     +  G  ++ ++++  Y D ++ VG AL+DM+ K 
Sbjct: 264 EMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQD-NIFVGSALVDMYCKC 322

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              ++SA  VF KM  KN V WT M+    Q G   +A+++F DM  +G  PD FTL  V
Sbjct: 323 K-SIKSAETVFRKMNCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSV 381

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +S+C+ L     G Q H  A+ +GL   + V  +LV +Y KC   GS++DS ++F  M  
Sbjct: 382 ISSCANLASLEEGAQFHCRALVSGLISFITVSNALVTLYGKC---GSIEDSHRLFSEMSY 438

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            + +SWTA+++GY Q  G+  E ++LF  M+     P+  TF  VL AC          Q
Sbjct: 439 VDEVSWTALVSGYAQF-GKANETLRLFESMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQ 497

Query: 410 VYTHAVKRGR--ALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--Y 464
           ++   +K  R   ++D     +I +++R+GR+E+ARK    + F  + + + +++ +  +
Sbjct: 498 IFESMIKEHRIIPIEDHY-TCMIDLFSRAGRLEEARKFINKMPFSPDAIGWASLLSSCRF 556

Query: 465 AKNLNSEK-AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            +N+   K A E L ++E        +  AS +  +S   A GK E++
Sbjct: 557 HRNMEIGKWAAESLLKLE-------PHNTASYILLSSIYAAKGKWEEV 597



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 162/310 (52%), Gaps = 12/310 (3%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++AI     M  +    D  T+  +L +C        GK VH+ + R+  + N  
Sbjct: 251 QNGLDREAIDLFREMRLENLEMDQYTFGSVLTACGGVMALQEGKQVHAYIIRTDYQDNIF 310

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +Y KC  +  A  +F+ M N +++VSW++M+  Y   G   +A+ +F +M   
Sbjct: 311 VGSALVDMYCKCKSIKSAETVFRKM-NCKNVVSWTAMLVGYGQNGYSEEAVKIFCDMQNN 369

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P+++   +VI +C+N  ++  G   +   L  G   S + V  AL+ ++ K GS+  
Sbjct: 370 GIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGLI-SFITVSNALVTLYGKCGSI-- 426

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E ++++F +M+  + V WT +++   Q G   + +RLF  M+  GF PD+ T  GV+SAC
Sbjct: 427 EDSHRLFSEMSYVDEVSWTALVSGYAQFGKANETLRLFESMLAHGFKPDKVTFIGVLSAC 486

Query: 294 SELELFTSGKQLHSWAIRTG--LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDH 350
           S   L   G Q+    I+    + ++    C ++D++++    G ++++RK  ++M    
Sbjct: 487 SRAGLVQKGNQIFESMIKEHRIIPIEDHYTC-MIDLFSRA---GRLEEARKFINKMPFSP 542

Query: 351 NVMSWTAIIT 360
           + + W ++++
Sbjct: 543 DAIGWASLLS 552



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 103/214 (48%), Gaps = 11/214 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ +  +G  ++A+     M   G  PD  T   ++ SC    +   G   H     S L
Sbjct: 347 LVGYGQNGYSEEAVKIFCDMQNNGIEPDDFTLGSVISSCANLASLEEGAQFHCRALVSGL 406

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                + N+L++LY KCG + +++++F  M +  D VSW++++S Y   GK  + + +F 
Sbjct: 407 ISFITVSNALVTLYGKCGSIEDSHRLFSEM-SYVDEVSWTALVSGYAQFGKANETLRLFE 465

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF----DSDVCVGCALIDM 225
            ML  GF P++  F  V+ ACS    V  G+ I+  ++K        D   C    +ID+
Sbjct: 466 SMLAHGFKPDKVTFIGVLSACSRAGLVQKGNQIFESMIKEHRIIPIEDHYTC----MIDL 521

Query: 226 FVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           F +    LE A K  +KM    + +GW  +++ C
Sbjct: 522 FSRAG-RLEEARKFINKMPFSPDAIGWASLLSSC 554


>gi|224060327|ref|XP_002300144.1| predicted protein [Populus trichocarpa]
 gi|222847402|gb|EEE84949.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 254/636 (39%), Positives = 392/636 (61%), Gaps = 19/636 (2%)

Query: 239 VFDKMTEKNTV-GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F+K  ++  V  W  +I    + G   +++R F  M      P+R T    + +CS L 
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SGKQ H  A+  G   D+ V  +L+DMY+KC   G + ++R +FD +   N+++WT+
Sbjct: 97  DLNSGKQAHQQALVFGFESDLFVSSALIDMYSKC---GKLSNARVLFDEIPRRNIVTWTS 153

Query: 358 IITGYVQSGGRDKEAVKLFSDMI---------QGQVAPNHFTFASVLKACGNLLDSNVAE 408
           +ITGYVQ+     EA+ +F + +         +   + +     SVL AC  + +  V+E
Sbjct: 154 LITGYVQNDDA-HEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSE 212

Query: 409 QVYTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            V+  A+K G  LD  +G  N+L+  YA+ G +  +RK F+ + EK++VS+N+M+  YA+
Sbjct: 213 GVHGVAIKVG--LDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEKDVVSWNSMIAVYAQ 270

Query: 467 NLNSEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           N  S  AFE+ H +   G G  +  T ++LL   +  GA+  G  +H ++IK G+ +N  
Sbjct: 271 NGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVI 330

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           +  ++I MY +C   E A   F  M+++NV SWT+MI G+  HGFA  AL++FY+M+  G
Sbjct: 331 MATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAG 390

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +KPN IT+I+VL+ACSHAG + EGW+ F +M  E+ +   +EHY CMVDLLGR+G + EA
Sbjct: 391 VKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEHYGCMVDLLGRAGYIKEA 450

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
              I+SM +  D ++W + L ACR+H D EL + +A  + + DP +   ++LL+N+YA A
Sbjct: 451 YNLIKSMKVRRDFVLWGSLLAACRIHKDVELAEISARELFKLDPSNCGYYVLLANIYADA 510

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W+ V  +R  +K+R L+K  G S +E   +VH F VG+  HP+  +IY  L++L++K+
Sbjct: 511 GRWKDVERMRILVKDRGLVKPPGYSLVELKGRVHVFLVGDKEHPQHEKIYKYLEELSVKL 570

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           +E GY+P+   VLH+++EE+K   +  HSEK+AVAFG++++     I V KNLRVCGDCH
Sbjct: 571 QEAGYVPNMASVLHDVDEEEKEMIVRVHSEKLAVAFGVMNSIPGSTIHVIKNLRVCGDCH 630

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           T IK IS +  REI++RD+ RFHH KDG CSC DYW
Sbjct: 631 TVIKLISKIVSREIIVRDAKRFHHFKDGLCSCGDYW 666



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 222/450 (49%), Gaps = 26/450 (5%)

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F    ++ D+ SW+S+I+     G   +++  F  M +L   PN   F   I++CS   
Sbjct: 37  LFNKYFDRTDVYSWNSLIAELARGGDSCESLRAFSWMRKLDIKPNRSTFPCAIKSCSALF 96

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G   +   L  G F+SD+ V  ALIDM+ K    L +A  +FD++  +N V WT +
Sbjct: 97  DLNSGKQAHQQALVFG-FESDLFVSSALIDMYSKCG-KLSNARVLFDEIPRRNIVTWTSL 154

Query: 255 ITRCTQLGCPRDAIRLFLDMILS---------GFLPDRFTLSGVVSACSELELFTSGKQL 305
           IT   Q     +A+ +F + +           G   D   +  V+SACS +      + +
Sbjct: 155 ITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISVLSACSRVSNKAVSEGV 214

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H  AI+ GL   + V  +L+D YAKC   G V  SRKVFD M + +V+SW ++I  Y Q+
Sbjct: 215 HGVAIKVGLDKVMGVENTLLDAYAKC---GEVSLSRKVFDDMAEKDVVSWNSMIAVYAQN 271

Query: 366 GGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
            G   +A ++F  M++ G    N  T +++L AC +     V   ++   +K G   +  
Sbjct: 272 -GLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCLHDQVIKMGYVNNVI 330

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +  S+I MY + G+ E AR AF+ + EKN+ S+  M+  Y  +  + +A ++ +++   G
Sbjct: 331 MATSIIDMYCKCGQAEMARNAFDGMKEKNVRSWTAMIAGYGMHGFAREALDVFYQMIWAG 390

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQI-----HARIIKSGFESNHCIYNALISMYSRCAN 539
           V  +  TF S+L+  S  G + +G +      H   ++ G E     Y  ++ +  R   
Sbjct: 391 VKPNYITFISVLAACSHAGFLEEGWRWFNAMSHEYNVEPGVEH----YGCMVDLLGRAGY 446

Query: 540 VEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           ++ A+ + K M+  R+ + W S++     H
Sbjct: 447 IKEAYNLIKSMKVRRDFVLWGSLLAACRIH 476



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/334 (34%), Positives = 170/334 (50%), Gaps = 19/334 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+   +KSC    + + GK  H        E +  + ++LI +YSKCG L+ A  +
Sbjct: 80  PNRSTFPCAIKSCSALFDLNSGKQAHQQALVFGFESDLFVSSALIDMYSKCGKLSNARVL 139

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML---------ELGFCPNEYCFSAV 186
           F  +  +R+IV+W+S+I+ YV      +A+ +F E L         E+G   +     +V
Sbjct: 140 FDEI-PRRNIVTWTSLITGYVQNDDAHEALMVFKEFLFEKSEGNGEEVGTSVDSVAMISV 198

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
           + ACS   N A+   ++G  +K G  D  + V   L+D + K G V L  + KVFD M E
Sbjct: 199 LSACSRVSNKAVSEGVHGVAIKVG-LDKVMGVENTLLDAYAKCGEVSL--SRKVFDDMAE 255

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQ 304
           K+ V W  MI    Q G   DA  +F  M+ +G    +  TLS ++ AC+       G  
Sbjct: 256 KDVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMC 315

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH   I+ G   +V +  S++DMY KC   G  + +R  FD M + NV SWTA+I GY  
Sbjct: 316 LHDQVIKMGYVNNVIMATSIIDMYCKC---GQAEMARNAFDGMKEKNVRSWTAMIAGYGM 372

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             G  +EA+ +F  MI   V PN+ TF SVL AC
Sbjct: 373 H-GFAREALDVFYQMIWAGVKPNYITFISVLAAC 405



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 72/220 (32%), Positives = 116/220 (52%), Gaps = 4/220 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L +C R  N  + + VH +  +  L+    + N+L+  Y+KCG+++ + K+F  M  K 
Sbjct: 198 VLSACSRVSNKAVSEGVHGVAIKVGLDKVMGVENTLLDAYAKCGEVSLSRKVFDDMAEK- 256

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHII 202
           D+VSW+SMI+ Y   G   DA  +F  ML+ G    NE   S ++ AC++   + +G  +
Sbjct: 257 DVVSWNSMIAVYAQNGLSTDAFEVFHGMLKAGGGKYNEVTLSTLLLACAHEGALRVGMCL 316

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  ++K GY + +V +  ++IDM+ K     E A   FD M EKN   WT MI      G
Sbjct: 317 HDQVIKMGYVN-NVIMATSIIDMYCKCG-QAEMARNAFDGMKEKNVRSWTAMIAGYGMHG 374

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
             R+A+ +F  MI +G  P+  T   V++ACS       G
Sbjct: 375 FAREALDVFYQMIWAGVKPNYITFISVLAACSHAGFLEEG 414


>gi|356522365|ref|XP_003529817.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Glycine max]
          Length = 882

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 283/804 (35%), Positives = 456/804 (56%), Gaps = 12/804 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G + +A+  LD M +     + D Y  L++ C   R    G  V+S ++ S    +  + 
Sbjct: 85  GNLDRAMSYLDSMHELRIPVEDDAYVALIRLCEWKRARKEGSRVYSYVSISMSHLSLQLG 144

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+S++ + G+L +A  +F  M  KR++ SW+ ++  Y   G   +A+ ++  ML +G 
Sbjct: 145 NALLSMFVRFGNLVDAWYVFGRM-EKRNLFSWNVLVGGYAKAGLFDEALDLYHRMLWVGV 203

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ Y F  V+R C    N+  G  I+  +++ G F+SDV V  ALI M+VK   D+ +A
Sbjct: 204 KPDVYTFPCVLRTCGGMPNLVRGREIHVHVIRYG-FESDVDVVNALITMYVKCG-DVNTA 261

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             VFDKM  ++ + W  MI+   + G   + +RLF  MI     PD  T++ V++AC  L
Sbjct: 262 RLVFDKMPNRDRISWNAMISGYFENGVCLEGLRLFGMMIKYPVDPDLMTMTSVITACELL 321

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+Q+H + +RT    D  +  SL+ MY+     G ++++  VF R    +++SWT
Sbjct: 322 GDDRLGRQIHGYVLRTEFGRDPSIHNSLIPMYSSV---GLIEEAETVFSRTECRDLVSWT 378

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I+GY ++    ++A++ +  M    + P+  T A VL AC  L + ++   ++  A +
Sbjct: 379 AMISGY-ENCLMPQKALETYKMMEAEGIMPDEITIAIVLSACSCLCNLDMGMNLHEVAKQ 437

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           +G      V NSLI MYA+   ++ A + F S  EKN+VS+ +++     N    +A   
Sbjct: 438 KGLVSYSIVANSLIDMYAKCKCIDKALEIFHSTLEKNIVSWTSIILGLRINNRCFEALFF 497

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             E+    +  ++ T   +LS  + IGA+  G++IHA  +++G   +  + NA++ MY R
Sbjct: 498 FREMIRR-LKPNSVTLVCVLSACARIGALTCGKEIHAHALRTGVSFDGFMPNAILDMYVR 556

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  +E A++ F  + D  V SW  ++TG+A+ G  A A E+F +M+   + PN +T+I++
Sbjct: 557 CGRMEYAWKQFFSV-DHEVTSWNILLTGYAERGKGAHATELFQRMVESNVSPNEVTFISI 615

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L ACS +G+++EG ++F SM  ++ I+  ++HYAC+VDLLGRSG L EA EFI+ MP+  
Sbjct: 616 LCACSRSGMVAEGLEYFNSMKYKYSIMPNLKHYACVVDLLGRSGKLEEAYEFIQKMPMKP 675

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  VW   L +CR+H   ELG+ AAE I + D      +ILLSNLYA  G W+ VA +RK
Sbjct: 676 DPAVWGALLNSCRIHHHVELGELAAENIFQDDTTSVGYYILLSNLYADNGKWDKVAEVRK 735

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL-PDTN 775
            M++  LI + GCSW+E    VH F   +  HP+  EI A L++   K+KE G   P+++
Sbjct: 736 MMRQNGLIVDPGCSWVEVKGTVHAFLSSDNFHPQIKEINALLERFYKKMKEAGVEGPESS 795

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
            +  ++ E  K      HSE++A+ FGLI++    PI V KNL +C  CH  +K+IS   
Sbjct: 796 HM--DIMEASKADIFCGHSERLAIVFGLINSGPGMPIWVTKNLYMCQSCHNIVKFISREV 853

Query: 836 GREIVLRDSNRFHHIKDGKCSCND 859
            REI +RD+ +FHH K G CSC D
Sbjct: 854 RREISVRDAEQFHHFKGGICSCTD 877


>gi|113205417|gb|AAU90328.2| Pentatricopeptide repeat domain containing protein, putative
           [Solanum demissum]
          Length = 819

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 260/794 (32%), Positives = 451/794 (56%), Gaps = 12/794 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           + + G  P++  ++  LK  +R+      + +   +       N+  +N ++S Y K  +
Sbjct: 37  IVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYR----NTSSVNMMVSGYVKSRN 92

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A ++F+SM + R+ VSW+ MI  Y    +  +A +++ EM   G  P+   F+ ++ 
Sbjct: 93  LFRARELFESMFS-RNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLS 151

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
              +T  +     I+  +++ G F + + V  +L+D + K    L+ A ++F +M  K++
Sbjct: 152 GFDDTTTLKEVLQIHSHIIRFG-FSASLIVFNSLVDSYCKTCC-LDIASQLFSEMPTKDS 209

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V + +MIT  T+ G   +A++LF+ M    F P  FT + ++      E    G+Q+H  
Sbjct: 210 VSFNVMITGYTKYGFREEALKLFMQMRNMDFQPSGFTFAAMLGMSVGSEDVIFGQQIHGL 269

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           AI+T    D+ V  +L+D Y+K      +D ++ +FD M + + +S+  IITGY  +G  
Sbjct: 270 AIKTSYVWDIFVANALLDFYSK---HDYIDLAKNLFDEMPELDGVSYNIIITGYAWNGQY 326

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           +K +  LF  +        +F FA++L      L+ ++  Q +  AV      +  VGN+
Sbjct: 327 EK-SFDLFKRLQGTSFDRKNFPFATMLSVAAIELNLSMGRQTHAQAVVTTAVSEVQVGNA 385

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L+ MYA+  + EDA + F +L  +N V +  ++  Y +    E+A ++  E+    V   
Sbjct: 386 LVDMYAKCEKFEDANRIFANLAYRNSVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGD 445

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             TFAS L  ++++ ++  G+Q+H+ +I+ G  S+    + L+ MY+ C +++ A +VFK
Sbjct: 446 QATFASTLKASANLASVSLGKQLHSSVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFK 505

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           EM DRN++ W ++I+ ++++G A      F  M+  G+ P+ +++++VL+ACSH GL+ +
Sbjct: 506 EMPDRNIVCWNALISAYSQNGDAEATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEK 565

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
              +F SM   + +  R +HYA M+D+L RSG   EA   I  MP   D ++W + L +C
Sbjct: 566 ALWYFNSMTQVYKLDPRRKHYATMIDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSC 625

Query: 669 RVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
           R+H + +L K AA+ + + D  +D AA++ +SN+YA AG WE  A ++K M+ER + K  
Sbjct: 626 RIHKNQDLAKKAADQLFKMDALRDAAAYVNMSNIYAEAGKWENAAKVKKAMRERGVKKVT 685

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
             SW+E D++VH F   + +HP+T +I  +++ L   + + GY PDT+  L  ++EE K+
Sbjct: 686 AYSWVEIDHRVHVFTANDRTHPQTEQIRRKINSLVELMDKEGYKPDTSCTLQNVDEEMKI 745

Query: 788 QYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRF 847
           + L  HSE++A+AF LI+T +  PI + KNLR C DCH AIK IS + GREI +RDS+RF
Sbjct: 746 ESLKYHSERLAIAFALINTPEGSPIIIMKNLRACVDCHAAIKVISKIVGREITVRDSSRF 805

Query: 848 HHIKDGKCSCNDYW 861
           HH +DG CSC DYW
Sbjct: 806 HHFRDGSCSCGDYW 819



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/216 (24%), Positives = 101/216 (46%), Gaps = 1/216 (0%)

Query: 43  SEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS 102
           S P +  +  ++  G  ++A+     M ++  H D  T++  LK+     +  LGK +HS
Sbjct: 411 SVPWTAIISIYVQKGFHEEALKMFKEMNRENVHGDQATFASTLKASANLASVSLGKQLHS 470

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
            + R  L  +    + L+ +Y+ CG + +A ++FK M + R+IV W+++IS+Y   G   
Sbjct: 471 SVIRLGLLSSVFSGSVLVDMYANCGSMKDAIEVFKEMPD-RNIVCWNALISAYSQNGDAE 529

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
                F +M+E G  P+   F +V+ ACS+   V      +  + +    D        +
Sbjct: 530 ATFSSFADMIESGLYPDSVSFLSVLTACSHRGLVEKALWYFNSMTQVYKLDPRRKHYATM 589

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           ID+  +     E+   + +   E + V W+ ++  C
Sbjct: 590 IDVLCRSGRFNEAENLISEMPFEPDEVMWSSVLNSC 625



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 32/129 (24%), Positives = 56/129 (43%), Gaps = 31/129 (24%)

Query: 511 IHARIIKSGFE-------------------------------SNHCIYNALISMYSRCAN 539
           + ARI+K+GF+                                N    N ++S Y +  N
Sbjct: 33  VDARIVKTGFDPEISRFNFKLKDLVRANQIAKARQLFDEMPYRNTSSVNMMVSGYVKSRN 92

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +  A ++F+ M  RN +SWT MI G++++     A  ++ +M   G+KP+ IT+  +LS 
Sbjct: 93  LFRARELFESMFSRNEVSWTIMIGGYSQNNQPKEAFNLYTEMCRSGVKPDHITFATLLSG 152

Query: 600 CSHAGLISE 608
                 + E
Sbjct: 153 FDDTTTLKE 161


>gi|449477503|ref|XP_004155042.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Cucumis sativus]
          Length = 990

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 288/839 (34%), Positives = 457/839 (54%), Gaps = 29/839 (3%)

Query: 45  PLSNRLIYH--LNDGRVQ---------------KAIFT-LDLMTQKGNHPDLDTYSLLLK 86
           PL +RL++   LN    Q               +AI T L+L++     PD  T+  L+K
Sbjct: 159 PLESRLVFDRLLNKNLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIK 218

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C    + HLGK VH +  +  L  +  + N++I+LY KCG L+EA ++F  M  +++++
Sbjct: 219 ACTGKCDIHLGKSVHGMAVKMGLIMDLFVGNAMIALYGKCGFLDEAVELFDKM-PEQNLI 277

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELG--FCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           SW+S+I  +   G  ++A   F  +LE G    P+      ++  CS   NV +G +I+G
Sbjct: 278 SWNSLIRGFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHG 337

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
             +K G    ++ V  ALIDM+ K    L  A  +F K+  K+ V W  MI   ++ G  
Sbjct: 338 MAVKLGLVH-ELMVCNALIDMYSKCGC-LSEAAILFRKIENKSVVSWNSMIGAYSREGFV 395

Query: 265 RDAIRLFLDMILSGFLPD--RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
            +   L   M +   L +    T+  ++ AC E     S + LH +++R        +  
Sbjct: 396 FETFDLLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINN 455

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           + +  YAKC   GS+  +  VF  M   +V SW A+I G+ Q+G   K A+  + +M + 
Sbjct: 456 AFIAAYAKC---GSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIK-ALDFYFEMTRL 511

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            + P+ F+  S+L ACG L      ++++   ++ G  ++  V  SL+S+Y    +    
Sbjct: 512 GILPDDFSIVSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYG 571

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R  FE + +KN V +N M+  Y++N    +A  L  ++   G+       AS+L   S +
Sbjct: 572 RTYFERMGDKNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQL 631

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            A+G G+++H   +K+    ++ +  +L+ MY++   +  + ++F  +  + V SW  MI
Sbjct: 632 SALGLGKEVHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLNGKEVASWNVMI 691

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           TGF  HG   +A+E+F  M     +P+  T++ VL AC HAGL+SEG  +   M   + +
Sbjct: 692 TGFGVHGQGNKAVELFEDMKRSDKQPDRFTFLGVLQACCHAGLVSEGLNYLAQMQTLYKL 751

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +EHYAC++D+LGR+G L EAL FI  MP   D  +W + L +   + D E+G+  AE
Sbjct: 752 EPELEHYACVIDMLGRAGRLNEALNFINEMPEEPDAKIWSSLLSSSITYVDLEMGEKFAE 811

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            +L  +     ++ILLSNLYA+AG W+ V  +R++MK+ +L K+ GCSWIE   KV+ F 
Sbjct: 812 KLLALEANKADSYILLSNLYATAGKWDVVRMVRQKMKDLSLQKDVGCSWIELRGKVYSFI 871

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
            GE S+P + EI    ++L  +I E GY PD + VLHELEE +K + L  HSEK+A+ FG
Sbjct: 872 AGENSNPSSDEIRKMWNRLEKQIVEIGYTPDCSCVLHELEEVEKRKILKGHSEKVAICFG 931

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            ++T +   +R+ KNLR+C DCH A KYIS    REIV+RD+ RFHH K G CSC DYW
Sbjct: 932 FLNTKEGTTLRISKNLRICRDCHNAAKYISKAAKREIVIRDNKRFHHFKKGICSCGDYW 990



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 161/633 (25%), Positives = 319/633 (50%), Gaps = 20/633 (3%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSKCGDLNEANKIFK 137
           +   +LL+ C + +N  +G+ +  +L  S       +LN+ LI++YS CG   E+  +F 
Sbjct: 108 EAMGMLLQKCGQYKNVEIGRKLDEMLCVSSQFSGDFVLNTRLITMYSICGYPLESRLVFD 167

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENV 196
            + NK ++  W++++S YV      +AIH F+E++ +  F P+ + F  +I+AC+   ++
Sbjct: 168 RLLNK-NLFQWNALVSGYVRNELYDEAIHTFLELISVTEFQPDNFTFPCLIKACTGKCDI 226

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
            +G  ++G  +K G    D+ VG A+I ++ K    L+ A ++FDKM E+N + W  +I 
Sbjct: 227 HLGKSVHGMAVKMGLI-MDLFVGNAMIALYGKCGF-LDEAVELFDKMPEQNLISWNSLIR 284

Query: 257 RCTQLGCPRDAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
             ++ G   +A R F  ++ S  G +PD  T+  ++  CS       G  +H  A++ GL
Sbjct: 285 GFSENGFWLEAYRAFRSLLESGDGLIPDVATMVTLLPVCSGEGNVDVGMVIHGMAVKLGL 344

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             ++ V  +L+DMY+KC   G + ++  +F ++ + +V+SW ++I  Y + G    E   
Sbjct: 345 VHELMVCNALIDMYSKC---GCLSEAAILFRKIENKSVVSWNSMIGAYSREGFV-FETFD 400

Query: 375 LFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           L   M   +  +  N  T  ++L AC    +      ++ ++++      + + N+ I+ 
Sbjct: 401 LLRKMWMEEELMEVNEVTILNLLPACLEESELLSLRALHGYSLRHSFQYKELINNAFIAA 460

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+ G +  A   F  +  K++ S+N ++  +A+N +  KA +   E+   G+    ++ 
Sbjct: 461 YAKCGSLVFAEHVFFGMNTKSVSSWNAVIGGHAQNGDPIKALDFYFEMTRLGILPDDFSI 520

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            SLL     +G +  G++IH  ++++G E N  +  +L+S+Y  C+        F+ M D
Sbjct: 521 VSLLLACGRLGLLQYGKEIHGFVLRNGLEMNSFVAVSLLSLYFHCSKPFYGRTYFERMGD 580

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           +N + W +M++G++++     AL +F +ML+DG++P+ I   ++L ACS    +  G K 
Sbjct: 581 KNSVCWNAMLSGYSQNELPNEALSLFRQMLSDGLEPDEIAIASILGACSQLSALGLG-KE 639

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
                 ++ +++       ++D+  +SG L  +      +    +V  W   +    VHG
Sbjct: 640 VHCFALKNSLMEDNFVACSLMDMYAKSGFLGHSQRIFNRLN-GKEVASWNVMITGFGVHG 698

Query: 673 DTELGKHAAEMI--LEQDPQDPAAHILLSNLYA 703
               G  A E+   +++  + P     L  L A
Sbjct: 699 Q---GNKAVELFEDMKRSDKQPDRFTFLGVLQA 728


>gi|15235498|ref|NP_192184.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213324|sp|Q9SY02.1|PP301_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g02750
 gi|4263522|gb|AAD15348.1| hypothetical protein [Arabidopsis thaliana]
 gi|7269760|emb|CAB77760.1| hypothetical protein [Arabidopsis thaliana]
 gi|332656824|gb|AEE82224.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 781

 Score =  494 bits (1272), Expect = e-137,   Method: Compositional matrix adjust.
 Identities = 277/778 (35%), Positives = 455/778 (58%), Gaps = 41/778 (5%)

Query: 93  NFH-LGKLVHSLLTRSKLEP-----NSVI--LNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           NFH L +   + + +S+ +P     +S I   N  IS Y + G  NEA ++FK M  +  
Sbjct: 36  NFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM-PRWS 94

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
            VS++ MIS Y+  G+   A  +F EM E         ++ +I+      N+     ++ 
Sbjct: 95  SVSYNGMISGYLRNGEFELARKLFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFE 150

Query: 205 FLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
            +      + DVC    ++  + + G VD   A  VFD+M EKN V W  +++   Q   
Sbjct: 151 IMP-----ERDVCSWNTMLSGYAQNGCVD--DARSVFDRMPEKNDVSWNALLSAYVQNSK 203

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A  LF        +     L G V    + ++  + +   S  +R     DV    +
Sbjct: 204 MEEACMLFKSRENWALVSWNCLLGGFVK---KKKIVEARQFFDSMNVR-----DVVSWNT 255

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           ++  YA+    G +D++R++FD     +V +WTA+++GY+Q+   + EA +LF  M +  
Sbjct: 256 IITGYAQ---SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE-EARELFDKMPE-- 309

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
              N  ++ ++L          +A++++     R  +      N++I+ YA+ G++ +A+
Sbjct: 310 --RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAK 363

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
             F+ + +++ VS+  M+  Y+++ +S +A  L  ++E  G   +  +F+S LS  + + 
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           A+  G+Q+H R++K G+E+   + NAL+ MY +C ++E A  +FKEM  ++++SW +MI 
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           G+++HGF   AL  F  M  +G+KP+  T +AVLSACSH GL+ +G ++F +M  ++G++
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
              +HYACMVDLLGR+G L +A   +++MP   D  +W T LGA RVHG+TEL + AA+ 
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           I   +P++   ++LLSNLYAS+G W  V  +R RM+++ + K  G SWIE  NK H F V
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+  HP+  EI+A L++L L++K+ GY+  T+ VLH++EEE+K + +  HSE++AVA+G+
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGI 723

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +  S  +PIRV KNLRVC DCH AIKY++ +TGR I+LRD+NRFHH KDG CSC DYW
Sbjct: 724 MRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781



 Score = 83.2 bits (204), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 5/189 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G   +  ++S  L +C       LGK +H  L +   E    + N+L+ +Y KCG 
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EAN +FK M  K DIVSW++MI+ Y   G    A+  F  M   G  P++    AV+ 
Sbjct: 460 IEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518

Query: 189 ACSNTENVAIG-HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EK 246
           ACS+T  V  G    Y      G   +     C ++D+  +  + LE A+ +   M  E 
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC-MVDLLGRAGL-LEDAHNLMKNMPFEP 576

Query: 247 NTVGWTLMI 255
           +   W  ++
Sbjct: 577 DAAIWGTLL 585


>gi|326509211|dbj|BAJ91522.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 878

 Score =  494 bits (1271), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 290/805 (36%), Positives = 457/805 (56%), Gaps = 46/805 (5%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSM 151
           + H   L  +LL R    P+  + N+L++ Y++CGDL+ A  +F +   + RD VS++S+
Sbjct: 84  SLHAAALRRALLHR----PSPAVGNALLTAYARCGDLDAALALFAATATELRDAVSYNSL 139

Query: 152 ISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSN---TENVAIGHIIYGFLL 207
           IS+     +   A+    +ML  G    + +   +V+ ACS+    +   +G   + F L
Sbjct: 140 ISALCLFRQWERALDALRDMLAEGRHDVSSFTLVSVLLACSHLPGDDGRRLGREAHAFAL 199

Query: 208 KCGYFDS--DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEK------NTVGWTLMITRC 258
           K G+ D   +     AL+ M+ + G VD   A  +F            + V W  MI+  
Sbjct: 200 KRGFLDEGRERFPFNALLSMYARLGLVD--DAQSLFRTTAAAFSPGGGDVVTWNTMISLL 257

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG-LALD 317
            Q G   +A+ +  DM+  G  PD  T +  + ACS LE+   G+++H+  ++   LA +
Sbjct: 258 VQGGRCAEAVEVLYDMVSLGVRPDGVTFASALPACSRLEMLALGREMHAVVLKDADLAAN 317

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD--HNVMSWTAIITGYVQSGGRDKEAVKL 375
             V  +LVDMYA    +  V  +R+VFD + +    +  W A+I GY Q+G  D+EA++L
Sbjct: 318 SFVASALVDMYAG---NEKVASARRVFDMVPEPSRQLGMWNAMICGYAQAG-MDEEALEL 373

Query: 376 FSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           FS M  +   AP+  T + VL AC         E ++ + VKRG A +  V N+L+ MYA
Sbjct: 374 FSRMEAEAGCAPSETTMSGVLPACARSEGFAGKEAMHGYVVKRGMAGNRFVQNALMDMYA 433

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE----------DTG 484
           R G M+ AR+ F  +  +++VS+NT++       ++ +AF+L+ E++           T 
Sbjct: 434 RLGEMDVARRIFAMIDPRDVVSWNTLITGCVVQGHAAEAFQLVTEMQLPSPSPSSSSTTE 493

Query: 485 VGTS------AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
            G +        T  +LL G +++ A  +G++IH   ++   ES+  + +AL+ MY++C 
Sbjct: 494 EGEAHRCMPNNITLMTLLPGCAALAAPARGKEIHGYAVRHALESDIAVGSALVDMYAKCG 553

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVL 597
            + A+  VF  +  RNVI+W  +I  +  HG    A+ +F +M A G   PN +T+IA L
Sbjct: 554 CLAASRAVFDRLPRRNVITWNVLIMAYGMHGLGDEAVALFDEMAAGGEATPNEVTFIAAL 613

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM-PLSA 656
           +ACSH+GL+  G + F  M  +HG+    + +AC+VD+LGR+G L EA   I SM P   
Sbjct: 614 AACSHSGLVDRGLELFHGMERDHGVKPTPDLHACVVDVLGRAGRLDEAYSIITSMEPGEQ 673

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
            V  W + LGACR+H + ELG+ AAE + E +P + + ++LL N+Y++AG W+    +R 
Sbjct: 674 QVSAWSSLLGACRLHRNVELGEVAAERLFELEPGEASHYVLLCNIYSAAGMWDKSVAVRV 733

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
           RM+ + + KE GCSWIE D  +H+F  GE+SHP + E++A +D L  +++  GY PDT+ 
Sbjct: 734 RMRRQGVAKEPGCSWIELDGAIHRFMAGESSHPASAEVHAHMDALWERMRREGYAPDTSC 793

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VLH+++E++K   L  HSEK+A+AFGL+       IRV KNLRVC DCH A K++S + G
Sbjct: 794 VLHDVDEDEKAAMLRYHSEKLAIAFGLLRAPPGAAIRVAKNLRVCNDCHEAAKFMSKMVG 853

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R+IVLRD  RFHH +DG CSC DYW
Sbjct: 854 RDIVLRDVRRFHHFRDGSCSCGDYW 878


>gi|308080264|ref|NP_001183681.1| uncharacterized protein LOC100502275 [Zea mays]
 gi|238013832|gb|ACR37951.1| unknown [Zea mays]
 gi|413938826|gb|AFW73377.1| hypothetical protein ZEAMMB73_579690 [Zea mays]
          Length = 745

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/659 (37%), Positives = 393/659 (59%), Gaps = 31/659 (4%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVV 290
           L+    +F  M +++TV +  +I   +  G    A+RL+  ++ +G    P R T+S +V
Sbjct: 88  LDDMDSLFASMAQRDTVSYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMV 147

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS-------------- 336
            A S L     G+Q H   +R G  ++  VG  LV MYAK  + G               
Sbjct: 148 MAASALGDRALGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVV 207

Query: 337 --------------VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
                         V+++R++F+ M D + ++WT ++TG+ Q+G  + +A+  F  M   
Sbjct: 208 MYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNG-LESQALNFFRRMRFQ 266

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            +A + +TF S+L ACG L      +Q++ + ++     +  VG++L+ MY++   ++ A
Sbjct: 267 GIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVFVGSALVDMYSKCRSIKPA 326

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
             AF  +  KN++S+  ++  Y +N  SE+A  +  E++  G+    +T  S++S  +++
Sbjct: 327 ETAFRRMSCKNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANL 386

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            ++ +G Q H   + SG      + NAL+++Y +C ++E A ++F EM   + +SWT+++
Sbjct: 387 ASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGSIEDAHRLFDEMLFHDQVSWTALV 446

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           TG+A+ G A   +++F KMLA  +KP+G+T+I VLSACS AG + +G  +F SM  +HGI
Sbjct: 447 TGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSRAGFVEKGCSYFHSMQKDHGI 506

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
           V   +HY CM+DL  RSG L EA EFI+ MP+  D + W T L ACR+ GD E+G+ AAE
Sbjct: 507 VPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSACRLRGDMEIGQWAAE 566

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            +LE DPQ+PA+++LL +++A+ G+W  VA +R+ M++R + KE GCSWI+  NKVH F 
Sbjct: 567 NLLEIDPQNPASYVLLCSMHATKGNWNQVAQLRRGMRDRQVKKEPGCSWIKYKNKVHIFS 626

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
             + SHP +  IY +L+ L  K+ E GY PD + VLH++ +  KV  +  HSEK+A+AFG
Sbjct: 627 ADDQSHPFSKGIYEKLEWLNSKMLEEGYKPDVSSVLHDVADTDKVHMVSHHSEKLAIAFG 686

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           L+      PIR+ KNLRVC DCH A K IS +TGR+I++RD+ RFH   +G CSC D+W
Sbjct: 687 LMFVPHEMPIRIVKNLRVCVDCHNATKLISKITGRDILVRDAVRFHKFSNGVCSCGDFW 745



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 239/488 (48%), Gaps = 40/488 (8%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           PN    N+L+S  +    L++ + +F SM  +RD VS++++I+ +   G    A+ ++  
Sbjct: 70  PNLFTYNALLSTLAHARLLDDMDSLFASMA-QRDTVSYNAVIAGFSGGGAHARAVRLYHT 128

Query: 171 MLELGFC--PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           +L  G    P+    SA++ A S   + A+G   +  +L+ G F  +  VG  L+ M+ K
Sbjct: 129 LLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHCQILRLG-FGVNAFVGSPLVGMYAK 187

Query: 229 GSVD------------------------------LESAYKVFDKMTEKNTVGWTLMITRC 258
             +                               +E A ++F+ MT+++ + WT M+T  
Sbjct: 188 MGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEEARRLFEVMTDRDCITWTTMVTGF 247

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           TQ G    A+  F  M   G   D++T   +++AC  L     GKQ+H++ IRT    +V
Sbjct: 248 TQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNV 307

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG +LVDMY+KC    S+  +   F RM   N++SWTA+I GY Q+G   +EAV++FS+
Sbjct: 308 FVGSALVDMYSKCR---SIKPAETAFRRMSCKNIISWTALIVGYGQNGC-SEEAVRVFSE 363

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M +  + P+ FT  SV+ +C NL       Q +  A+  G      V N+L+++Y + G 
Sbjct: 364 MQRDGIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHYITVSNALVTLYGKCGS 423

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +EDA + F+ +   + VS+  +V  YA+   +++  +L  ++    V     TF  +LS 
Sbjct: 424 IEDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSA 483

Query: 499 ASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
            S  G + KG    H+     G       Y  +I +YSR   ++ A +  K+M    + I
Sbjct: 484 CSRAGFVEKGCSYFHSMQKDHGIVPIDDHYTCMIDLYSRSGRLKEAEEFIKQMPMHPDAI 543

Query: 557 SWTSMITG 564
            W ++++ 
Sbjct: 544 GWGTLLSA 551



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/404 (29%), Positives = 208/404 (51%), Gaps = 46/404 (11%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK------------- 142
           LG+  H  + R     N+ + + L+ +Y+K G + +A ++F  M  K             
Sbjct: 158 LGRQFHCQILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLL 217

Query: 143 -----------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
                            RD ++W++M++ +   G +  A++ F  M   G   ++Y F +
Sbjct: 218 RCKMVEEARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGS 277

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           ++ AC     +  G  I+ ++++  ++D +V VG AL+DM+ K    ++ A   F +M+ 
Sbjct: 278 ILTACGALSALEQGKQIHAYIIRT-HYDDNVFVGSALVDMYSK-CRSIKPAETAFRRMSC 335

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN + WT +I    Q GC  +A+R+F +M   G  PD FTL  V+S+C+ L     G Q 
Sbjct: 336 KNIISWTALIVGYGQNGCSEEAVRVFSEMQRDGIDPDDFTLGSVISSCANLASLEEGAQF 395

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H  A+ +GL   + V  +LV +Y KC   GS++D+ ++FD ML H+ +SWTA++TGY Q 
Sbjct: 396 HCLALVSGLMHYITVSNALVTLYGKC---GSIEDAHRLFDEMLFHDQVSWTALVTGYAQF 452

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRA--- 420
            GR KE + LF  M+   V P+  TF  VL AC     +   E+   Y H++++      
Sbjct: 453 -GRAKETIDLFEKMLAKDVKPDGVTFIGVLSACSR---AGFVEKGCSYFHSMQKDHGIVP 508

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           +DD     +I +Y+RSGR+++A +  + +    + + + T++ A
Sbjct: 509 IDDHY-TCMIDLYSRSGRLKEAEEFIKQMPMHPDAIGWGTLLSA 551



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 161/339 (47%), Gaps = 23/339 (6%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M  +G   D  T+  +L +C        GK +H+ + R+  + N  
Sbjct: 249 QNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGALSALEQGKQIHAYIIRTHYDDNVF 308

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKC  +  A   F+ M  K +I+SW+++I  Y   G   +A+ +F EM   
Sbjct: 309 VGSALVDMYSKCRSIKPAETAFRRMSCK-NIISWTALIVGYGQNGCSEEAVRVFSEMQRD 367

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P+++   +VI +C+N  ++  G   +   L  G     + V  AL+ ++ K GS+  
Sbjct: 368 GIDPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMHY-ITVSNALVTLYGKCGSI-- 424

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+++FD+M   + V WT ++T   Q G  ++ I LF  M+     PD  T  GV+SAC
Sbjct: 425 EDAHRLFDEMLFHDQVSWTALVTGYAQFGRAKETIDLFEKMLAKDVKPDGVTFIGVLSAC 484

Query: 294 SELELFTSG-KQLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH- 350
           S       G    HS     G+  +D    C ++D+Y++    G + ++ +   +M  H 
Sbjct: 485 SRAGFVEKGCSYFHSMQKDHGIVPIDDHYTC-MIDLYSR---SGRLKEAEEFIKQMPMHP 540

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           + + W  +++           A +L  DM  GQ A  + 
Sbjct: 541 DAIGWGTLLS-----------ACRLRGDMEIGQWAAENL 568



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/307 (23%), Positives = 134/307 (43%), Gaps = 74/307 (24%)

Query: 427 NSLISMYARSGRMEDARKAFE-------------------------------SLFEKNLV 455
           N L++ Y ++GR   AR+ F+                               S+ +++ V
Sbjct: 45  NHLLTAYGKAGRHARARRVFDATPHPNLFTYNALLSTLAHARLLDDMDSLFASMAQRDTV 104

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTG--VGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           SYN ++  ++      +A  L H +   G  V  S  T ++++  AS++G    G Q H 
Sbjct: 105 SYNAVIAGFSGGGAHARAVRLYHTLLRAGSSVRPSRITMSAMVMAASALGDRALGRQFHC 164

Query: 514 RIIKSGFESNHCIYNALISMYS-------------------------------RCANVEA 542
           +I++ GF  N  + + L+ MY+                               RC  VE 
Sbjct: 165 QILRLGFGVNAFVGSPLVGMYAKMGLIGDAKRVFDEMDGKNVVMYNTMITGLLRCKMVEE 224

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A ++F+ M DR+ I+WT+M+TGF ++G  ++AL  F +M   GI  +  T+ ++L+AC  
Sbjct: 225 ARRLFEVMTDRDCITWTTMVTGFTQNGLESQALNFFRRMRFQGIAIDQYTFGSILTACGA 284

Query: 603 AGLISEGWK-H---FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
              + +G + H    R+ YD++  V      + +VD+  +  S+  A    R M    ++
Sbjct: 285 LSALEQGKQIHAYIIRTHYDDNVFVG-----SALVDMYSKCRSIKPAETAFRRMSCK-NI 338

Query: 659 LVWRTFL 665
           + W   +
Sbjct: 339 ISWTALI 345


>gi|297734119|emb|CBI15366.3| unnamed protein product [Vitis vinifera]
          Length = 783

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/678 (36%), Positives = 402/678 (59%), Gaps = 7/678 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++AC   +++ +G  ++  +     F +D  +   +I M+       +S   VFDK+  
Sbjct: 111 LLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSMCGSPSDSRM-VFDKLRR 169

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           KN   W  +++  T+     DA+ +F ++I ++   PD FTL  V+ AC+ L     G+ 
Sbjct: 170 KNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLPCVIKACAGLLDLGLGQI 229

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS-RKVFDRMLDHNVMSWTAIITGYV 363
           +H  A +  L  DV VG +L+ MY KC   G V+++ ++VFD M    V SW A++ GY 
Sbjct: 230 IHGMATKMDLVSDVFVGNALIAMYGKC---GLVEEAVKRVFDLMDTKTVSSWNALLCGYA 286

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           Q+    ++A+ L+  M    + P+ FT  S+L AC  +   +  E+++  A++ G A+D 
Sbjct: 287 QNSD-PRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEEIHGFALRNGLAVDP 345

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            +G SL+S+Y   G+   A+  F+ +  ++LVS+N M+  Y++N   ++A  L  ++   
Sbjct: 346 FIGISLLSLYICCGKPFAAQVLFDGMEHRSLVSWNVMIAGYSQNGLPDEAINLFRQMLSD 405

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+         +    S + A+  G+++H   +K+    +  + +++I MY++   +  +
Sbjct: 406 GIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIFVSSSIIDMYAKGGCIGLS 465

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            ++F  + +++V SW  +I G+  HG    ALE+F KML  G+KP+  T+  +L ACSHA
Sbjct: 466 QRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLGLKPDDFTFTGILMACSHA 525

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL+ +G ++F  M + H I  ++EHY C+VD+LGR+G + +AL  I  MP   D  +W +
Sbjct: 526 GLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDALRLIEEMPGDPDSRIWSS 585

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L +CR+HG+  LG+  A  +LE +P+ P  ++L+SNL+A +G W+ V  +R RMK+  L
Sbjct: 586 LLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGSGKWDDVRRVRGRMKDIGL 645

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K+AGCSWIE   KVH F +G+   P+  E+     +L +KI   GY PDT  VLH+LEE
Sbjct: 646 QKDAGCSWIEVGGKVHNFLIGDEMLPELEEVRETWRRLEVKISSIGYTPDTGSVLHDLEE 705

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E K+  L  HSEK+A++FGL++T+K  P+RV+KNLR+CGDCH A K+IS V  R+IV+RD
Sbjct: 706 EDKIGILRGHSEKLAISFGLLNTAKGLPVRVYKNLRICGDCHNAAKFISKVVNRDIVVRD 765

Query: 844 SNRFHHIKDGKCSCNDYW 861
           + RFHH +DG CSC DYW
Sbjct: 766 NKRFHHFRDGICSCGDYW 783



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 164/600 (27%), Positives = 302/600 (50%), Gaps = 25/600 (4%)

Query: 14  PPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQK 72
           P +S   S  +RQ    + S  F    T  +  S   I  L   G +++A   LD + ++
Sbjct: 41  PIASLSLSAQTRQ----TKSLSFANSSTNRQFSSLHEIKKLCESGNLKEA---LDFLQRE 93

Query: 73  GNHPDLDT------YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS-LISLYSK 125
            +   LD+        +LL++C + ++  +G+ +H +++ S    N  +LN+ +I++YS 
Sbjct: 94  SDDVVLDSAQRSEAMGVLLQACGQRKDIEVGRRLHEMVSASTQFCNDFVLNTRIITMYSM 153

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFS 184
           CG  +++  +F  +  ++++  W++++S+Y       DA+ +F E++ +    P+ +   
Sbjct: 154 CGSPSDSRMVFDKL-RRKNLFQWNAIVSAYTRNELFEDAMSIFSELISVTEHKPDNFTLP 212

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            VI+AC+   ++ +G II+G   K     SDV VG ALI M+ K  +  E+  +VFD M 
Sbjct: 213 CVIKACAGLLDLGLGQIIHGMATKMDLV-SDVFVGNALIAMYGKCGLVEEAVKRVFDLMD 271

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            K    W  ++    Q   PR A+ L+L M  SG  PD FT+  ++ ACS ++    G++
Sbjct: 272 TKTVSSWNALLCGYAQNSDPRKALDLYLQMTDSGLDPDWFTIGSLLLACSRMKSLHYGEE 331

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H +A+R GLA+D  +G SL+ +Y  C   G    ++ +FD M   +++SW  +I GY Q
Sbjct: 332 IHGFALRNGLAVDPFIGISLLSLYICC---GKPFAAQVLFDGMEHRSLVSWNVMIAGYSQ 388

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G  D EA+ LF  M+   + P       V  AC  L    + ++++  A+K     D  
Sbjct: 389 NGLPD-EAINLFRQMLSDGIQPYEIAIMCVCGACSQLSALRLGKELHCFALKAHLTEDIF 447

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V +S+I MYA+ G +  +++ F+ L EK++ S+N ++  Y  +   ++A EL  ++   G
Sbjct: 448 VSSSIIDMYAKGGCIGLSQRIFDRLREKDVASWNVIIAGYGIHGRGKEALELFEKMLRLG 507

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAA 543
           +    +TF  +L   S  G +  G +   +++     E     Y  ++ M  R   ++ A
Sbjct: 508 LKPDDFTFTGILMACSHAGLVEDGLEYFNQMLNLHNIEPKLEHYTCVVDMLGRAGRIDDA 567

Query: 544 FQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACS 601
            ++ +EM  D +   W+S+++    HG      ++  K+L  +  KP     I+ L A S
Sbjct: 568 LRLIEEMPGDPDSRIWSSLLSSCRIHGNLGLGEKVANKLLELEPEKPENYVLISNLFAGS 627


>gi|225442928|ref|XP_002265258.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Vitis vinifera]
          Length = 703

 Score =  493 bits (1270), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 257/678 (37%), Positives = 404/678 (59%), Gaps = 7/678 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC-ALIDMFVKGSVDLESAYKVFDKMT 244
           +++  ++T+N+  G +I+  L+       D  V   +LI+++ K    +  A  +FD M 
Sbjct: 31  LLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCD-QIMVARILFDGMR 89

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGK 303
           ++N V W  ++      G   + +RLF  MI   ++ P+ +  + ++S+CS+      G 
Sbjct: 90  KRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCSDSGQVVEGW 149

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q H +A+++GL     V  +L+ MY++      V  +  V+  +   +V S+  II G +
Sbjct: 150 QCHGYALKSGLVFHQYVKNALICMYSR---RSDVKGAMSVWYEVPGLDVFSYNIIINGLL 206

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           ++G    EA+++   M+   +  ++ T+ +    C +L D  +  QV+    + G   D 
Sbjct: 207 ENG-YPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDS 265

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V +++I MY + G + +ARK F  L  KN+VS+  ++ AY++N   E+A     E+E  
Sbjct: 266 FVSSAIIDMYGKCGNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFEEALNFFPEMEVD 325

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+  + YTFA LL+  + I A+G G+ +H RI KSGFE +  + NALI+MYS+  ++EAA
Sbjct: 326 GLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALINMYSKSGSIEAA 385

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +VF EM  R+ I+W++MI G + HG    AL +F +MLA    P+ +T++ VLSAC+H 
Sbjct: 386 HKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSACAHL 445

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           G + EG+ +   +  + GI   +EHY C+V LL ++G L EA  F++S P+  DV+ WRT
Sbjct: 446 GSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKSTPVKWDVVAWRT 505

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L AC VH +  LGK  AE++L+ DP D   +ILLSN+YA A  W+ V  IRK M+ERN+
Sbjct: 506 LLSACHVHQNYGLGKKVAELVLQMDPGDVGTYILLSNMYAKAKRWDGVVKIRKLMRERNV 565

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            KE G SWIE  N +H F     +HP++ +IY ++ +L   I+  GY+PD   V H++E+
Sbjct: 566 KKEPGASWIEIRNSIHVFVSEGKTHPESNQIYEKVQELLTMIRPMGYVPDIAAVFHDVED 625

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           EQK +Y+  HSEK+A+A+GL+ T    PIRV KNLR+C DCH+A+K IS VT R I++RD
Sbjct: 626 EQKREYVSYHSEKLAIAYGLMKTPSGAPIRVIKNLRMCVDCHSAVKLISKVTNRMIIVRD 685

Query: 844 SNRFHHIKDGKCSCNDYW 861
           +NRFH   DG CSC DYW
Sbjct: 686 ANRFHCFGDGGCSCADYW 703



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 143/515 (27%), Positives = 265/515 (51%), Gaps = 16/515 (3%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHS--LLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           HP L+    LLK    ++N   GK++H+  ++T    + N V +NSLI+LY+KC  +  A
Sbjct: 23  HP-LEHTIQLLKVSADTKNLKFGKMIHAHLIITNQATKDNIVQVNSLINLYAKCDQIMVA 81

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACS 191
             +F  M  KR++VSW ++++ Y + G  ++ + +F  M+ + +  PNEY F+ +I +CS
Sbjct: 82  RILFDGM-RKRNVVSWGALMAGYFHNGLVLEVLRLFKTMISVDYMRPNEYIFATIISSCS 140

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
           ++  V  G   +G+ LK G       V  ALI M+ + S D++ A  V+ ++   +   +
Sbjct: 141 DSGQVVEGWQCHGYALKSGLVFHQY-VKNALICMYSRRS-DVKGAMSVWYEVPGLDVFSY 198

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            ++I    + G P +A+ +   M+    + D  T       CS L+    G Q+H    R
Sbjct: 199 NIIINGLLENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFR 258

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           TG   D  V  +++DMY KC   G++ ++RKVF+R+   NV+SWTAI+  Y Q+G  + E
Sbjct: 259 TGAEYDSFVSSAIIDMYGKC---GNILNARKVFNRLQTKNVVSWTAILAAYSQNGCFE-E 314

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A+  F +M    + PN +TFA +L +C  +      + ++T   K G      VGN+LI+
Sbjct: 315 ALNFFPEMEVDGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSGFEDHIIVGNALIN 374

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY++SG +E A K F  +  ++ ++++ M+   + +    +A  +  E+          T
Sbjct: 375 MYSKSGSIEAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVT 434

Query: 492 FASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           F  +LS  + +G++ +G     +++K +G E     Y  ++ +  +   ++ A    K  
Sbjct: 435 FVGVLSACAHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKAGRLDEAENFMKST 494

Query: 551 EDR-NVISWTSMITGFAKH---GFAARALEIFYKM 581
             + +V++W ++++    H   G   +  E+  +M
Sbjct: 495 PVKWDVVAWRTLLSACHVHQNYGLGKKVAELVLQM 529



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 94/336 (27%), Positives = 173/336 (51%), Gaps = 10/336 (2%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L +G   +A+  LD M  +    D  TY      C   ++  LG  VH  + R+  E +S
Sbjct: 206 LENGYPSEALEVLDRMVDECIVWDNVTYVTAFGLCSHLKDLRLGLQVHCRMFRTGAEYDS 265

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + +++I +Y KCG++  A K+F  +  K ++VSW++++++Y   G   +A++ F EM  
Sbjct: 266 FVSSAIIDMYGKCGNILNARKVFNRLQTK-NVVSWTAILAAYSQNGCFEEALNFFPEMEV 324

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PNEY F+ ++ +C+    +  G +++  + K G F+  + VG ALI+M+ K S  +
Sbjct: 325 DGLLPNEYTFAVLLNSCAGISALGHGKLLHTRIKKSG-FEDHIIVGNALINMYSK-SGSI 382

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E+A+KVF +M  ++++ W+ MI   +  G  R+A+ +F +M+ +   P   T  GV+SAC
Sbjct: 383 EAAHKVFLEMICRDSITWSAMICGLSHHGLGREALVVFQEMLAAKECPHYVTFVGVLSAC 442

Query: 294 SELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHN 351
           + L     G   L+    +TG+   V     +V +  K    G +D++        +  +
Sbjct: 443 AHLGSVQEGFYYLNQLMKQTGIEPGVEHYTCIVGLLCKA---GRLDEAENFMKSTPVKWD 499

Query: 352 VMSWTAIITG--YVQSGGRDKEAVKLFSDMIQGQVA 385
           V++W  +++     Q+ G  K+  +L   M  G V 
Sbjct: 500 VVAWRTLLSACHVHQNYGLGKKVAELVLQMDPGDVG 535


>gi|224092360|ref|XP_002309575.1| predicted protein [Populus trichocarpa]
 gi|222855551|gb|EEE93098.1| predicted protein [Populus trichocarpa]
          Length = 653

 Score =  493 bits (1269), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 258/658 (39%), Positives = 397/658 (60%), Gaps = 15/658 (2%)

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F  D+ +   LI M+ K    L  A  VFD+M ++N V WT ++    Q G P +++ LF
Sbjct: 3   FGFDLMLSNDLIVMYGKCG-RLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
             M LSG  P+ FT S  + AC  L     G+Q+H   ++TG  +   VG S++DMY+KC
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G ++++  +F+ M   N++SW A+I GY  +G  +K A+ LF  M +     + FTF
Sbjct: 122 ---GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEK-ALVLFQKMQEVGGFLDEFTF 177

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRG--RALDDCVGNSLISMYARSGRMEDARKAFESL 449
            S LKAC +L       Q++   +  G   +++  V  +LI +Y + G++  AR+ F  +
Sbjct: 178 TSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCGKLFMARRVFSHI 237

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            EK+++S+  ++  YA+  N  ++ EL  ++ ++ +    +  +S++   +    + +G+
Sbjct: 238 EEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGK 297

Query: 510 QIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           Q+HA  IK  SG + + C  N+++ MY +C  +  A ++F EM  RNVISWT MITG+ K
Sbjct: 298 QMHAFAIKVPSGVDISVC--NSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGK 355

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG    A+ +F +M  D  +P+ +TY+AVL  CSH+GL+ +G ++F  +   HGI  R+E
Sbjct: 356 HGLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVE 415

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HYACMVDLLGR+G L EA   + SMPL A+V +W+T L ACRVHGD ELGK    ++L  
Sbjct: 416 HYACMVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHGDLELGKEVGGILLRL 475

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           D ++P  ++++SN+YA AG+W+    IR+ +K + L KEAG SW+E D +VH F+ G+ +
Sbjct: 476 DSENPVNYVMMSNIYADAGYWKECERIRELVKSKKLKKEAGRSWVEIDKEVHFFYGGDDT 535

Query: 748 HPKTLEIYAELDQLALKIK-EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS- 805
           HP T +I+  L ++  ++K E GY+    + LH++EEE K+  L  HSEK+A+   L+  
Sbjct: 536 HPLTEKIHEILKEMERRMKEELGYVYGVKYALHDVEEESKMDNLRVHSEKLAIGLALVCG 595

Query: 806 --TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
                 K IRVFKNLRVCGDCH  IK +S +     V+RD+NRFH  +DG CSC DYW
Sbjct: 596 GLEEGRKVIRVFKNLRVCGDCHEFIKGLSKILRVVFVVRDANRFHRFEDGLCSCRDYW 653



 Score =  203 bits (517), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 234/457 (51%), Gaps = 11/457 (2%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI +Y KCG L  A  +F  M  KR++VSW++++  ++  G  ++++ +F +M   G 
Sbjct: 11  NDLIVMYGKCGRLGVACDVFDRM-LKRNVVSWTALMCGHIQNGNPLESLLLFSKMGLSGV 69

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN++ FS  ++AC     + IG  I+   +K G FD    VG ++IDM+ K    +  A
Sbjct: 70  KPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTG-FDMVNVVGNSIIDMYSKCG-RINEA 127

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +F+ M  +N + W  MI   T  G    A+ LF  M   G   D FT +  + ACS+L
Sbjct: 128 ACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTLKACSDL 187

Query: 297 ELFTSGKQLHSWAIRTGL--ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                G Q+H++ I  G   +++  V  +L+D+Y KC   G +  +R+VF  + + +V+S
Sbjct: 188 GAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKC---GKLFMARRVFSHIEEKHVIS 244

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA+I GY Q G    E+++LF  + +  +  + F  +S++    +       +Q++  A
Sbjct: 245 WTALILGYAQEGNL-AESMELFRQLRESSIQVDGFILSSMMGVFADFALVQQGKQMHAFA 303

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K    +D  V NS++ MY + G + +A + F  +  +N++S+  M+  Y K+   ++A 
Sbjct: 304 IKVPSGVDISVCNSILDMYLKCGMINEAERLFSEMPARNVISWTVMITGYGKHGLGKEAI 363

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISM 533
            L  E++         T+ ++L G S  G + KG++  +R+    G ++    Y  ++ +
Sbjct: 364 RLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYFSRLCSYHGIKARVEHYACMVDL 423

Query: 534 YSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
             R   ++ A  +   M  + NV  W ++++    HG
Sbjct: 424 LGRAGRLKEAKNLVDSMPLEANVGIWQTLLSACRVHG 460



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 228/418 (54%), Gaps = 17/418 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+ +G   +++     M   G  P+  T+S  LK+C       +G+ +H +  ++  +  
Sbjct: 48  HIQNGNPLESLLLFSKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMV 107

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +V+ NS+I +YSKCG +NEA  +F+ M   R+++SW++MI+ Y   G    A+ +F +M 
Sbjct: 108 NVVGNSIIDMYSKCGRINEAACMFEVM-PVRNLISWNAMIAGYTVAGFCEKALVLFQKMQ 166

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS-DVCVGCALIDMFVKGSV 231
           E+G   +E+ F++ ++ACS+   +  G+ I+ FL+  G+  S +  V  ALID++VK   
Sbjct: 167 EVGGFLDEFTFTSTLKACSDLGAIKEGNQIHAFLITGGFLYSVNTAVAGALIDLYVKCG- 225

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A +VF  + EK+ + WT +I    Q G   +++ LF  +  S    D F LS ++ 
Sbjct: 226 KLFMARRVFSHIEEKHVISWTALILGYAQEGNLAESMELFRQLRESSIQVDGFILSSMMG 285

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
             ++  L   GKQ+H++AI+    +D+ V  S++DMY KC   G ++++ ++F  M   N
Sbjct: 286 VFADFALVQQGKQMHAFAIKVPSGVDISVCNSILDMYLKC---GMINEAERLFSEMPARN 342

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT +ITGY +  G  KEA++LF +M      P+  T+ +VL  C +       ++ +
Sbjct: 343 VISWTVMITGYGKH-GLGKEAIRLFDEMQLDSTEPDDVTYLAVLLGCSHSGLVEKGQEYF 401

Query: 412 T-----HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           +     H +K       C    ++ +  R+GR+++A+   +S+  E N+  + T++ A
Sbjct: 402 SRLCSYHGIKARVEHYAC----MVDLLGRAGRLKEAKNLVDSMPLEANVGIWQTLLSA 455



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 63/192 (32%), Positives = 106/192 (55%)

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G   D  + N LI MY + GR+  A   F+ + ++N+VS+  ++  + +N N  ++  L 
Sbjct: 2   GFGFDLMLSNDLIVMYGKCGRLGVACDVFDRMLKRNVVSWTALMCGHIQNGNPLESLLLF 61

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            ++  +GV  + +TF++ L     +  +  G QIH   +K+GF+  + + N++I MYS+C
Sbjct: 62  SKMGLSGVKPNDFTFSTNLKACGLLNGLDIGRQIHDICVKTGFDMVNVVGNSIIDMYSKC 121

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             +  A  +F+ M  RN+ISW +MI G+   GF  +AL +F KM   G   +  T+ + L
Sbjct: 122 GRINEAACMFEVMPVRNLISWNAMIAGYTVAGFCEKALVLFQKMQEVGGFLDEFTFTSTL 181

Query: 598 SACSHAGLISEG 609
            ACS  G I EG
Sbjct: 182 KACSDLGAIKEG 193


>gi|75273443|sp|Q9LIQ7.1|PP252_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g24000, mitochondrial; Flags: Precursor
 gi|9294669|dbj|BAB03018.1| unnamed protein product [Arabidopsis thaliana]
          Length = 633

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 237/584 (40%), Positives = 370/584 (63%), Gaps = 6/584 (1%)

Query: 279 FLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           ++P DR   + ++  C+  +L   G+ +H+  +++    D+ +G +L++MYAKC   GS+
Sbjct: 55  YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC---GSL 111

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +++RKVF++M   + ++WT +I+GY Q   R  +A+  F+ M++   +PN FT +SV+KA
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHD-RPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
                      Q++   VK G   +  VG++L+ +Y R G M+DA+  F++L  +N VS+
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N ++  +A+   +EKA EL   +   G   S +++ASL    SS G + +G+ +HA +IK
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           SG +      N L+ MY++  ++  A ++F  +  R+V+SW S++T +A+HGF   A+  
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M   GI+PN I++++VL+ACSH+GL+ EGW H+  +  + GIV    HY  +VDLLG
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW-HYYELMKKDGIVPEAWHYVTVVDLLG 409

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L  AL FI  MP+     +W+  L ACR+H +TELG +AAE + E DP DP  H++
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           L N+YAS G W   A +RK+MKE  + KE  CSW+E +N +H F   +  HP+  EI  +
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            +++  KIKE GY+PDT+ V+  ++++++   L  HSEKIA+AF L++T     I + KN
Sbjct: 530 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 589

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +RVCGDCHTAIK  S V GREI++RD+NRFHH KDG CSC DYW
Sbjct: 590 IRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633



 Score =  232 bits (592), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 219/398 (55%), Gaps = 12/398 (3%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D   Y+ LLK C   +    G++VH+ + +S    + V+ N+L+++Y+KCG L EA K+F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
           + M  +RD V+W+++IS Y    +  DA+  F +ML  G+ PNE+  S+VI+A +     
Sbjct: 119 EKMP-QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             GH ++GF +KCG FDS+V VG AL+D++ +  + ++ A  VFD +  +N V W  +I 
Sbjct: 178 CCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGL-MDDAQLVFDALESRNDVSWNALIA 235

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              +      A+ LF  M+  GF P  F+ + +  ACS       GK +H++ I++G  L
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
               G +L+DMYAK    GS+ D+RK+FDR+   +V+SW +++T Y Q G   KEAV  F
Sbjct: 296 VAFAGNTLLDMYAK---SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF-GKEAVWWF 351

Query: 377 SDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            +M +  + PN  +F SVL AC +  LLD       Y    K G   +     +++ +  
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDE--GWHYYELMKKDGIVPEAWHYVTVVDLLG 409

Query: 435 RSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
           R+G +  A +  E +  E     +  +++A   + N+E
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 230/428 (53%), Gaps = 13/428 (3%)

Query: 172 LELGFCPNEYCF-SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           LE  + P +  F + +++ C+  + +  G I++  +L+   F  D+ +G  L++M+ K G
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQ-SIFRHDIVMGNTLLNMYAKCG 109

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  LE A KVF+KM +++ V WT +I+  +Q   P DA+  F  M+  G+ P+ FTLS V
Sbjct: 110 S--LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + A +       G QLH + ++ G   +V VG +L+D+Y +    G +DD++ VFD +  
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY---GLMDDAQLVFDALES 224

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            N +SW A+I G+ +  G +K A++LF  M++    P+HF++AS+  AC +       + 
Sbjct: 225 RNDVSWNALIAGHARRSGTEK-ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+ + +K G  L    GN+L+ MYA+SG + DARK F+ L ++++VS+N+++ AYA++  
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            ++A     E+   G+  +  +F S+L+  S  G + +G   +  + K G       Y  
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADG 585
           ++ +  R  ++  A +  +EM  +     W +++     H      A A E  +++  D 
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463

Query: 586 IKPNGITY 593
             P+ I Y
Sbjct: 464 PGPHVILY 471



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 9/216 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H      +KA+     M + G  P   +Y+ L  +C  +     GK VH+ + +S  +  
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +   N+L+ +Y+K G +++A KIF  +  KRD+VSW+S++++Y   G   +A+  F EM 
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            +G  PNE  F +V+ ACS++  +  G   Y  + K G    +      ++D+  +   D
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAG-D 413

Query: 233 LESAYKVFDKMTEKNTVG-WTLMITRC-----TQLG 262
           L  A +  ++M  + T   W  ++  C     T+LG
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 34/281 (12%)

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
           +++E + +      + +LL   +    + +G  +HA I++S F  +  + N L++MY++C
Sbjct: 49  NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            ++E A +VF++M  R+ ++WT++I+G+++H     AL  F +ML  G  PN  T  +V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 598 SACS-----------HAGLISEGWK---HFRS----MYDEHGIVQRME------------ 627
            A +           H   +  G+    H  S    +Y  +G++   +            
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228

Query: 628 HYACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDTELGKHA-AEM 683
            +  ++    R     +ALE  + M           + +  GAC   G  E GK   A M
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           I   +     A   L ++YA +G       I  R+ +R+++
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329


>gi|297835482|ref|XP_002885623.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331463|gb|EFH61882.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 624

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 238/584 (40%), Positives = 370/584 (63%), Gaps = 6/584 (1%)

Query: 279 FLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           ++P DR   + ++  C+  +L T G+ +H   I++    D+ +  +L++MYAKC   GS+
Sbjct: 46  YIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKC---GSL 102

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +++RKVFD+M + + ++WT +I+GY Q   R  +A+ LF+ M++   +PN FT +SV+KA
Sbjct: 103 EEARKVFDKMPERDFVTWTTLISGYSQHD-RPFDALVLFNQMLRFGFSPNEFTLSSVIKA 161

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
                      Q++   VK G   +  VG++L+ +Y R G M+DA+  F++L  +N VS+
Sbjct: 162 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 221

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N ++  +A+   +EKA EL   +   G   S +++ASL    SS G + +G+ +HA +IK
Sbjct: 222 NALIAGHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 281

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           SG +      N L+ MY++  ++  A ++F  +  R+V+SW S++T +A+HGF   A+  
Sbjct: 282 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGNEAVCW 341

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M   GI+PN I++++VL+ACSH+GL+ EGW H+  +  + GIV    HY  +VDLLG
Sbjct: 342 FEEMRRGGIRPNEISFLSVLTACSHSGLLDEGW-HYYELMKKDGIVLEAWHYVTIVDLLG 400

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L  AL FI  MP+     +W+  L ACR+H +TELG +AAE + E DP DP  H++
Sbjct: 401 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 460

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           L N+YAS G W   A +RK+MKE  + KE  CSW+E +N +H F   +  HP+  EI  +
Sbjct: 461 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 520

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            +++  KIKE GY+PDT+ V+  ++++++   L  HSEKIA+AF L++T     I + KN
Sbjct: 521 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 580

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +RVCGDCH+AIK  S   GREI++RD+NRFHH KDG CSC DYW
Sbjct: 581 IRVCGDCHSAIKLASKAVGREIIVRDTNRFHHFKDGACSCKDYW 624



 Score =  238 bits (607), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/398 (34%), Positives = 220/398 (55%), Gaps = 12/398 (3%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D   Y+ LLK C   +    G++VH  L +S    + V+ N+L+++Y+KCG L EA K+F
Sbjct: 50  DRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKCGSLEEARKVF 109

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M  +RD V+W+++IS Y    +  DA+ +F +ML  GF PNE+  S+VI+A +     
Sbjct: 110 DKM-PERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVIKAAAAERRG 168

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             GH ++GF +KCG FDS+V VG AL+D++ +  + ++ A  VFD +  +N V W  +I 
Sbjct: 169 CCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGL-MDDAQLVFDALESRNDVSWNALIA 226

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              +      A+ LF  M+  GF P  F+ + +  ACS       GK +H++ I++G  L
Sbjct: 227 GHARRCGTEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 286

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
               G +L+DMYAK    GS+ D+RK+FDR+   +V+SW +++T Y Q G  + EAV  F
Sbjct: 287 VAFAGNTLLDMYAK---SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGN-EAVCWF 342

Query: 377 SDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            +M +G + PN  +F SVL AC +  LLD       Y    K G  L+     +++ +  
Sbjct: 343 EEMRRGGIRPNEISFLSVLTACSHSGLLDE--GWHYYELMKKDGIVLEAWHYVTIVDLLG 400

Query: 435 RSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
           R+G +  A +  E +  E     +  +++A   + N+E
Sbjct: 401 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 438



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/428 (30%), Positives = 230/428 (53%), Gaps = 13/428 (3%)

Query: 172 LELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           LE  + P +   ++ +++ C+  + +  G I++G L++   F  D+ +   L++M+ K G
Sbjct: 42  LEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQ-SIFRHDLVMNNTLLNMYAKCG 100

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  LE A KVFDKM E++ V WT +I+  +Q   P DA+ LF  M+  GF P+ FTLS V
Sbjct: 101 S--LEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSV 158

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + A +       G QLH + ++ G   +V VG +L+D+Y +    G +DD++ VFD +  
Sbjct: 159 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY---GLMDDAQLVFDALES 215

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            N +SW A+I G+ +  G +K A++LF  M++    P+HF++AS+  AC +       + 
Sbjct: 216 RNDVSWNALIAGHARRCGTEK-ALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKW 274

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+ + +K G  L    GN+L+ MYA+SG + DARK F+ L ++++VS+N+++ AYA++  
Sbjct: 275 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 334

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A     E+   G+  +  +F S+L+  S  G + +G   +  + K G       Y  
Sbjct: 335 GNEAVCWFEEMRRGGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVLEAWHYVT 394

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADG 585
           ++ +  R  ++  A +  +EM  +     W +++     H      A A E  +++  D 
Sbjct: 395 IVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 454

Query: 586 IKPNGITY 593
             P+ I Y
Sbjct: 455 PGPHVILY 462



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/210 (28%), Positives = 106/210 (50%), Gaps = 9/210 (4%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
            +KA+     M ++G  P   +Y+ L  +C  +     GK VH+ + +S  +  +   N+
Sbjct: 234 TEKALELFQGMLREGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLVAFAGNT 293

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+ +Y+K G +++A KIF  +  KRD+VSW+S++++Y   G   +A+  F EM   G  P
Sbjct: 294 LLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGNEAVCWFEEMRRGGIRP 352

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           NE  F +V+ ACS++  +  G   Y  + K G    +      ++D+  +   DL  A +
Sbjct: 353 NEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-LEAWHYVTIVDLLGRAG-DLNRALR 410

Query: 239 VFDKMTEKNTVG-WTLMITRC-----TQLG 262
             ++M  + T   W  ++  C     T+LG
Sbjct: 411 FIEEMPIEPTAAIWKALLNACRMHKNTELG 440



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 73/124 (58%)

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
           +++E + +      + +LL   +    + +G  +H  +I+S F  +  + N L++MY++C
Sbjct: 40  NDLEGSYIPVDRRFYNTLLKKCTVFKLLTQGRIVHGHLIQSIFRHDLVMNNTLLNMYAKC 99

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            ++E A +VF +M +R+ ++WT++I+G+++H     AL +F +ML  G  PN  T  +V+
Sbjct: 100 GSLEEARKVFDKMPERDFVTWTTLISGYSQHDRPFDALVLFNQMLRFGFSPNEFTLSSVI 159

Query: 598 SACS 601
            A +
Sbjct: 160 KAAA 163


>gi|449507535|ref|XP_004163058.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  493 bits (1268), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/788 (35%), Positives = 453/788 (57%), Gaps = 21/788 (2%)

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVI--------LNSLISLYSKCGDLN---EANKI 135
           S IR + F L  L ++      L+  + +        L+S+  L  K  DL       ++
Sbjct: 9   SAIRGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQL 68

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTE 194
           F  + +K D+  ++ +I  + + G    +I ++  + +     P+ + ++  I A S  E
Sbjct: 69  FNKV-SKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLE 127

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  +G +++   +  G   S++ VG A++D++ K +   E A KVFD M E++TV W  M
Sbjct: 128 DERVGVLLHAHSIVDG-VASNLFVGSAIVDLYFKFT-RAELARKVFDVMPERDTVLWNTM 185

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+  ++     D+IR+F+DM+  G   D  TL+ V++A +EL+ +  G  +   A + GL
Sbjct: 186 ISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL 245

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             DV V   L+ +Y+KC   G     R +FD++   +++S+ A+I+GY       + AV 
Sbjct: 246 HSDVYVLTGLISLYSKC---GKSCKGRILFDQIDQPDLISYNAMISGYT-FNHETESAVT 301

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +++      N  T   ++          ++  +   ++K G  L   V  +L ++Y 
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           R   ++ AR+ F+   EK+L S+N M+  Y +N  +++A  L  E+    +  +  T  S
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTS 420

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +LS  + +GA+  G+ +H  I     ESN  +  AL+ MY++C ++  A Q+F  M D+N
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V++W +MITG+  HG    AL++FY+ML  GI P G+T++++L ACSH+GL+SEG + F 
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM + +G     EHYACMVD+LGR+G LT ALEFI  MPL     VW   LGAC +H +T
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           E+   A++ + + DP++   ++LLSN+Y++  ++   A++R+ +K+R L K  GC+ IE 
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT-NFVLHELEEEQKVQYLFQH 793
           D++ + F  G+ SHP+   I+  L++L  K++E GY  +T    LH++E+E+K   +  H
Sbjct: 661 DDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+AFGLIST     IR+ KNLRVC DCHTA K+IS +T R IV+RD+NRFHH K+G
Sbjct: 721 SEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 781 ICSCGDYW 788



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 252/510 (49%), Gaps = 15/510 (2%)

Query: 46  LSNRLIYHLND-GRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNFHLGKLVHSL 103
           L N LI   +D G  + +IF    + +  N  PD  TY+  + +  R  +  +G L+H+ 
Sbjct: 79  LFNVLIRGFSDNGLPKSSIFLYTHLRKXTNLRPDNFTYAFAISAASRLEDERVGVLLHAH 138

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
                +  N  + ++++ LY K      A K+F  M  +RD V W++MIS +       D
Sbjct: 139 SIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISGFSRNSYFED 197

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           +I +FV+ML++G   +    + V+ A +  +   +G  I     K G   SDV V   LI
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKG-LHSDVYVLTGLI 256

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            ++ K     +    +FD++ + + + +  MI+  T       A+ LF +++ SG   + 
Sbjct: 257 SLYSKCGKSCKGRI-LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            TL G++            + + + +++ G+ L   V  +L  +Y +      V  +R++
Sbjct: 316 STLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL---NEVQFARQL 372

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           FD   + ++ SW A+I+GY Q+G  D+ A+ LF +M+  Q++PN  T  S+L AC  L  
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDR-AISLFQEMMP-QLSPNPVTVTSILSACAQLGA 430

Query: 404 SNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
            ++ +  + H + +   L+    V  +L+ MYA+ G + +AR+ F+ + +KN+V++N M+
Sbjct: 431 LSIGK--WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI 488

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI-HARIIKSGF 520
             Y  + + ++A +L +E+  +G+  +  TF S+L   S  G + +G +I H+     GF
Sbjct: 489 TGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           +     Y  ++ +  R   +  A +  + M
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERM 578


>gi|449470293|ref|XP_004152852.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Cucumis sativus]
          Length = 788

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 277/788 (35%), Positives = 453/788 (57%), Gaps = 21/788 (2%)

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVI--------LNSLISLYSKCGDLN---EANKI 135
           S IR + F L  L ++      L+  + +        L+S+  L  K  DL       ++
Sbjct: 9   SAIRGQRFFLTLLNNATTLSQLLQIQAQLILHGIHYDLSSITKLTHKFFDLGAVAHVRQL 68

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTE 194
           F  + +K D+  ++ +I  + + G    +I ++  + +     P+ + ++  I A S  E
Sbjct: 69  FNKV-SKPDLFLFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLE 127

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  +G +++   +  G   S++ VG A++D++ K +   E A KVFD M E++TV W  M
Sbjct: 128 DERVGVLLHAHSIVDG-VASNLFVGSAIVDLYFKFT-RAELARKVFDVMPERDTVLWNTM 185

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+  ++     D+IR+F+DM+  G   D  TL+ V++A +EL+ +  G  +   A + GL
Sbjct: 186 ISGFSRNSYFEDSIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKGL 245

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             DV V   L+ +Y+KC   G     R +FD++   +++S+ A+I+GY       + AV 
Sbjct: 246 HSDVYVLTGLISLYSKC---GKSCKGRILFDQIDQPDLISYNAMISGYT-FNHETESAVT 301

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +++      N  T   ++          ++  +   ++K G  L   V  +L ++Y 
Sbjct: 302 LFRELLASGQRVNSSTLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYC 361

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           R   ++ AR+ F+   EK+L S+N M+  Y +N  +++A  L  E+    +  +  T  S
Sbjct: 362 RLNEVQFARQLFDESPEKSLASWNAMISGYTQNGLTDRAISLFQEMMPQ-LSPNPVTVTS 420

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +LS  + +GA+  G+ +H  I     ESN  +  AL+ MY++C ++  A Q+F  M D+N
Sbjct: 421 ILSACAQLGALSIGKWVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKN 480

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V++W +MITG+  HG    AL++FY+ML  GI P G+T++++L ACSH+GL+SEG + F 
Sbjct: 481 VVTWNAMITGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFH 540

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM + +G     EHYACMVD+LGR+G LT ALEFI  MPL     VW   LGAC +H +T
Sbjct: 541 SMANNYGFQPMSEHYACMVDILGRAGQLTNALEFIERMPLEPGPAVWGALLGACMIHKNT 600

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           E+   A++ + + DP++   ++LLSN+Y++  ++   A++R+ +K+R L K  GC+ IE 
Sbjct: 601 EMANVASKRLFQLDPENVGYYVLLSNIYSTDRNFPKAASVRQVVKKRKLAKTPGCTLIEI 660

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT-NFVLHELEEEQKVQYLFQH 793
           D++ + F  G+ SHP+   I+  L++L  K++E GY  +T    LH++E+E+K   +  H
Sbjct: 661 DDQQYVFTSGDRSHPQATAIFEMLEKLTGKMREAGYQAETVTTALHDVEDEEKELMVNVH 720

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+AFGLIST     IR+ KNLRVC DCHTA K+IS +T R IV+RD+NRFHH K+G
Sbjct: 721 SEKLAIAFGLISTKPGTEIRIIKNLRVCLDCHTATKFISKITERVIVVRDANRFHHFKNG 780

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 781 ICSCGDYW 788



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 133/510 (26%), Positives = 253/510 (49%), Gaps = 15/510 (2%)

Query: 46  LSNRLIYHLND-GRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNFHLGKLVHSL 103
           L N LI   +D G  + +IF    + +K N  PD  TY+  + +  R  +  +G L+H+ 
Sbjct: 79  LFNVLIRGFSDNGLPKSSIFLYTHLRKKTNLRPDNFTYAFAISAASRLEDERVGVLLHAH 138

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
                +  N  + ++++ LY K      A K+F  M  +RD V W++MIS +       D
Sbjct: 139 SIVDGVASNLFVGSAIVDLYFKFTRAELARKVFDVMP-ERDTVLWNTMISGFSRNSYFED 197

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           +I +FV+ML++G   +    + V+ A +  +   +G  I     K G   SDV V   LI
Sbjct: 198 SIRVFVDMLDVGLSFDSTTLATVLTAVAELQEYRLGMGIQCLASKKG-LHSDVYVLTGLI 256

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            ++ K     +    +FD++ + + + +  MI+  T       A+ LF +++ SG   + 
Sbjct: 257 SLYSKCGKSCKGRI-LFDQIDQPDLISYNAMISGYTFNHETESAVTLFRELLASGQRVNS 315

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            TL G++            + + + +++ G+ L   V  +L  +Y +      V  +R++
Sbjct: 316 STLVGLIPVYLPFNHLQLSRLIQNLSLKIGIILQPSVSTALTTVYCRL---NEVQFARQL 372

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           FD   + ++ SW A+I+GY Q+G  D+ A+ LF +M+  Q++PN  T  S+L AC  L  
Sbjct: 373 FDESPEKSLASWNAMISGYTQNGLTDR-AISLFQEMMP-QLSPNPVTVTSILSACAQLGA 430

Query: 404 SNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
            ++ +  + H + +   L+    V  +L+ MYA+ G + +AR+ F+ + +KN+V++N M+
Sbjct: 431 LSIGK--WVHGLIKSERLESNVYVSTALVDMYAKCGSIVEARQLFDLMVDKNVVTWNAMI 488

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI-HARIIKSGF 520
             Y  + + ++A +L +E+  +G+  +  TF S+L   S  G + +G +I H+     GF
Sbjct: 489 TGYGLHGHGKEALKLFYEMLQSGIPPTGVTFLSILYACSHSGLVSEGNEIFHSMANNYGF 548

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           +     Y  ++ +  R   +  A +  + M
Sbjct: 549 QPMSEHYACMVDILGRAGQLTNALEFIERM 578


>gi|297809863|ref|XP_002872815.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318652|gb|EFH49074.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 776

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 281/796 (35%), Positives = 460/796 (57%), Gaps = 41/796 (5%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKL-VHSLLTRSKLEP-----NSVI--LNSLISLYSKC 126
           H  L+       +   + NFH  K    + + +S+ +P     +S I   N  IS Y + 
Sbjct: 13  HTSLNGLKRRYNNANSASNFHSSKSSTQTQIQKSQTKPLPKSGDSDIKEWNVAISSYMRT 72

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G  +EA ++FK M  +   VS+++MIS Y+  G+   A  +F EM E         ++ +
Sbjct: 73  GRCSEALRVFKRM-PRWSSVSYNAMISGYLRNGEFELARMLFDEMPERDLVS----WNVM 127

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
           I+      N+     ++  +      + DVC    ++  + + G VD   A +VFD+M E
Sbjct: 128 IKGYVRNRNLGKARELFERMP-----ERDVCSWNTILSGYAQNGCVD--DARRVFDRMPE 180

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN V W  +++   Q     +A  LF        +     L G V    + ++  + +  
Sbjct: 181 KNDVSWNALLSAYVQNSKLEEACVLFGSRENWALVSWNCLLGGFVK---KKKIVEARQFF 237

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
            S  +R     DV    +++  YA+   +G +D++R++FD    H+V +WTA+++GY+Q+
Sbjct: 238 DSMKVR-----DVVSWNTIITGYAQ---NGEIDEARQLFDESPVHDVFTWTAMVSGYIQN 289

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
              + EA +LF  M +     N  ++ ++L          +A++++     R    +   
Sbjct: 290 RMVE-EARELFDRMPE----RNEVSWNAMLAGYVQGERVEMAKELFDVMPCR----NVST 340

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            N++I+ YA+ G++ +A+  F+ + +++ VS+  M+  Y+++ +S +A  L   +E  G 
Sbjct: 341 WNTMITGYAQCGKISEAKNLFDKMPKRDPVSWAAMIAGYSQSGHSYEALRLFVLMEREGG 400

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             +  +F+S LS  + + A+  G+Q+H R++K G+E+   + NAL+ MY +C ++E A  
Sbjct: 401 RLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEAND 460

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +FKEM  ++++SW +MI G+++HGF   AL  F  M  +G+KP+  T +AVLSACSH GL
Sbjct: 461 LFKEMAGKDIVSWNTMIAGYSRHGFGEEALRFFESMKREGLKPDDATMVAVLSACSHTGL 520

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + +G ++F +M  ++G+    +HYACMVDLLGR+G L EA   +++MP   D  +W T L
Sbjct: 521 VDKGRQYFHTMTQDYGVRPNSQHYACMVDLLGRAGLLEEAHNLMKNMPFEPDAAIWGTLL 580

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
           GA RVHG+TEL + AA+ I   +P++   ++LLSNLYAS+G W  V  +R RM+++ + K
Sbjct: 581 GASRVHGNTELAETAADKIFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKK 640

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
             G SWIE  NK H F VG+  HP+  EI+A L+ L L++K+ GY+  T+ VLH++EEE+
Sbjct: 641 VPGYSWIEIQNKTHTFSVGDEFHPEKDEIFAFLEDLDLRMKKAGYVSKTSVVLHDVEEEE 700

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           K + +  HSE++AVA+G++  S  +PIRV KNLRVC DCH AIKY++ VTGR I+LRD+N
Sbjct: 701 KERMVRYHSERLAVAYGIMRVSSGRPIRVIKNLRVCEDCHNAIKYMAKVTGRLIILRDNN 760

Query: 846 RFHHIKDGKCSCNDYW 861
           RFHH KDG CSC DYW
Sbjct: 761 RFHHFKDGSCSCGDYW 776



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 49/144 (34%), Positives = 74/144 (51%), Gaps = 1/144 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+    LM ++G   +  ++S  L +C       LGK +H  L +   E    + 
Sbjct: 383 GHSYEALRLFVLMEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVG 442

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+ +Y KCG + EAN +FK M  K DIVSW++MI+ Y   G   +A+  F  M   G 
Sbjct: 443 NALLLMYCKCGSIEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEEALRFFESMKREGL 501

Query: 177 CPNEYCFSAVIRACSNTENVAIGH 200
            P++    AV+ ACS+T  V  G 
Sbjct: 502 KPDDATMVAVLSACSHTGLVDKGR 525


>gi|356542389|ref|XP_003539649.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Glycine max]
          Length = 676

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 251/644 (38%), Positives = 381/644 (59%), Gaps = 8/644 (1%)

Query: 222 LIDMFVKGSVDL---ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
           LI++ ++ S+     + A  VF +    N   +  +I         RDA+ ++  M   G
Sbjct: 37  LINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVSNDAFRDAVSVYASMRQHG 96

Query: 279 FLPDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           F PD FT   V+ AC+ L   F  G  LHS  I+TG   DV V   LV +Y+K   +G +
Sbjct: 97  FAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSK---NGFL 153

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            D+RKVFD + + NV+SWTAII GY++SG    EA+ LF  +++  + P+ FT   +L A
Sbjct: 154 TDARKVFDEIPEKNVVSWTAIICGYIESGCFG-EALGLFRGLLEMGLRPDSFTLVRILYA 212

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C  + D      +  +  + G   +  V  SL+ MYA+ G ME+AR+ F+ + EK++V +
Sbjct: 213 CSRVGDLASGRWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEARRVFDGMVEKDVVCW 272

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           + ++  YA N   ++A ++  E++   V    Y    + S  S +GA+  G      +  
Sbjct: 273 SALIQGYASNGMPKEALDVFFEMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDG 332

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
             F SN  +  ALI  Y++C +V  A +VFK M  ++ + + ++I+G A  G    A  +
Sbjct: 333 DEFLSNPVLGTALIDFYAKCGSVAQAKEVFKGMRRKDCVVFNAVISGLAMCGHVGAAFGV 392

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M+  G++P+G T++ +L  C+HAGL+ +G ++F  M     +   +EHY CMVDL  
Sbjct: 393 FGQMVKVGMQPDGNTFVGLLCGCTHAGLVDDGHRYFSGMSSVFSVTPTIEHYGCMVDLQA 452

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L EA + IRSMP+ A+ +VW   LG CR+H DT+L +H  + ++E +P +   ++L
Sbjct: 453 RAGLLVEAQDLIRSMPMEANSIVWGALLGGCRLHKDTQLAEHVLKQLIELEPWNSGHYVL 512

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN+Y+++  W+    IR  + ++ + K  GCSW+E D  VH+F VG+TSHP + +IY +
Sbjct: 513 LSNIYSASHRWDEAEKIRSSLNQKGMQKLPGCSWVEVDGVVHEFLVGDTSHPLSHKIYEK 572

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           L+ L   ++E GY P T FVL ++EEE+K  +L  HSEK+AVAF LIST     IRV KN
Sbjct: 573 LESLFKDLREAGYNPTTEFVLFDVEEEEKEYFLGCHSEKLAVAFALISTGAKDVIRVVKN 632

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVCGDCH AIK +S VTGREI++RD+NRFHH  +G CSC DYW
Sbjct: 633 LRVCGDCHEAIKLVSKVTGREIIVRDNNRFHHFTEGSCSCRDYW 676



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/366 (30%), Positives = 186/366 (50%), Gaps = 11/366 (3%)

Query: 36  FIAQPTTSEPLSNRLIYHL--NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR-SR 92
           F   P  +  L N LI  +  ND   + A+     M Q G  PD  T+  +LK+C R   
Sbjct: 58  FAQTPHPNIFLYNTLIRGMVSNDA-FRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPH 116

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
            FH+G  +HSL+ ++  + +  +   L+ LYSK G L +A K+F  +  K ++VSW+++I
Sbjct: 117 YFHVGLSLHSLVIKTGFDWDVFVKTGLVCLYSKNGFLTDARKVFDEIPEK-NVVSWTAII 175

Query: 153 SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
             Y+  G   +A+ +F  +LE+G  P+ +    ++ ACS   ++A G  I G++ + G  
Sbjct: 176 CGYIESGCFGEALGLFRGLLEMGLRPDSFTLVRILYACSRVGDLASGRWIDGYMRESGSV 235

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
             +V V  +L+DM+ K    +E A +VFD M EK+ V W+ +I      G P++A+ +F 
Sbjct: 236 -GNVFVATSLVDMYAKCG-SMEEARRVFDGMVEKDVVCWSALIQGYASNGMPKEALDVFF 293

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           +M      PD + + GV SACS L     G              +  +G +L+D YAKC 
Sbjct: 294 EMQRENVRPDCYAMVGVFSACSRLGALELGNWARGLMDGDEFLSNPVLGTALIDFYAKC- 352

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             GSV  +++VF  M   + + + A+I+G     G    A  +F  M++  + P+  TF 
Sbjct: 353 --GSVAQAKEVFKGMRRKDCVVFNAVISGLAMC-GHVGAAFGVFGQMVKVGMQPDGNTFV 409

Query: 393 SVLKAC 398
            +L  C
Sbjct: 410 GLLCGC 415



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 129/286 (45%), Gaps = 6/286 (2%)

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           A+Q +   ++ G   D  + N L+         + A   F      N+  YNT++     
Sbjct: 19  AKQCHCLLLRLGLHQDTYLINLLLRSSLHFAATQYATVVFAQTPHPNIFLYNTLIRGMVS 78

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG-AIGKGEQIHARIIKSGFESNHC 525
           N     A  +   +   G     +TF  +L   + +      G  +H+ +IK+GF+ +  
Sbjct: 79  NDAFRDAVSVYASMRQHGFAPDNFTFPFVLKACTRLPHYFHVGLSLHSLVIKTGFDWDVF 138

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           +   L+ +YS+   +  A +VF E+ ++NV+SWT++I G+ + G    AL +F  +L  G
Sbjct: 139 VKTGLVCLYSKNGFLTDARKVFDEIPEKNVVSWTAIICGYIESGCFGEALGLFRGLLEMG 198

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           ++P+  T + +L ACS  G ++ G +       E G V  +     +VD+  + GS+ EA
Sbjct: 199 LRPDSFTLVRILYACSRVGDLASG-RWIDGYMRESGSVGNVFVATSLVDMYAKCGSMEEA 257

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
                 M +  DV+ W   +     +G   + K A ++  E   ++
Sbjct: 258 RRVFDGM-VEKDVVCWSALIQGYASNG---MPKEALDVFFEMQREN 299


>gi|302802241|ref|XP_002982876.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
 gi|300149466|gb|EFJ16121.1| hypothetical protein SELMODRAFT_117311 [Selaginella moellendorffii]
          Length = 923

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/811 (32%), Positives = 456/811 (56%), Gaps = 13/811 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A      M  +G  P+  TY  +L +C     + +  +   +     LE + ++ 
Sbjct: 120 GHPKEAFHLFREMQLQGVMPNDVTYVAVLGAC--GHPWEVDTIRARVEACGSLELDVIVA 177

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++++ Y KCGDL+ A  +F  +   RD   W++MIS  V   +  +A+ +F +M   G 
Sbjct: 178 TAVMNAYGKCGDLDSAWGVFDGI-LVRDAAVWNAMISLLVAHEQGDEALELFRQMRLGGV 236

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN+    A + AC ++ + +    I+ F  +    D+D  V  AL++M+ K G VD   
Sbjct: 237 TPNKGTCVAALNACCHSRDFSEALRIHAFARELAG-DADTVVQTALVNMYGKFGKVD--D 293

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++F+++ E++ V W  M+T     G    A + F +M+L G LP R T   +++AC  
Sbjct: 294 AEEIFERIQERDVVSWNAMLTANACNGFHDKAFKCFREMLLVGELPSRITYVAILNACFL 353

Query: 296 LELFTSGKQLHSWAIRTGLAL---DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-N 351
                 G  + + A+  G  +   DV +G ++++MY++C    S   S  + ++  D  +
Sbjct: 354 AAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMYSRCKSPKSAFSSSLLLEQDRDQPS 413

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           +M W  +++ YV++  + +EA  +F  M+ G V  +  +  +V  ACG+       + ++
Sbjct: 414 IMMWNTVLSLYVENE-QFEEAFTIFRLMLLGGVTIDTVSLMTVFNACGSSASLEKGKWIH 472

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
           +   +        V N+L++MYAR G +EDAR+ F+++  +N++S+  MV  +++   + 
Sbjct: 473 SLLTESELTRKTPVQNALVTMYARLGSLEDAREIFDAMTTRNVISWTAMVGVHSQLGLNR 532

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A  +   I   GV  +  TF ++L+   ++ +I   + + A + ++GF  N  + N L+
Sbjct: 533 EALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGNVEVANGLL 592

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
               +C ++E     F+ M  +N +SW + I   A+HG   R +E+F  M  +GI    +
Sbjct: 593 CTLGKCGSLEEVANFFQVMAVKNQVSWNTAIAANAQHGNGVRGVELFQTMQLEGIDTGSV 652

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T I VLS+CSHAGL+++G+ +F +M+ ++G     EHY+C++DLL R+G L  A EF++ 
Sbjct: 653 TLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYSCVIDLLSRAGWLEHAEEFVKR 712

Query: 652 MPLS-ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           +P     V  W T L  C++HGD E G  A + IL  +P     ++++ NLYA AG W  
Sbjct: 713 LPFGDQSVFPWITLLCGCKLHGDLERGGRATQRILGLNPGSTGPYLVMHNLYAGAGKWPE 772

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
            A +RK M E    KE G SWIE   ++H+F VG+TSHP++ EI+ EL++L  ++K  G+
Sbjct: 773 AAAVRKSMVELGPKKEPGLSWIEVKGRIHEFRVGDTSHPRSSEIHRELERLNEEMKRAGF 832

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           + D   V+++L+ ++K   L QHSEK+A+AFGLIST+  +P+R+ KNLRVC DCH+A K+
Sbjct: 833 VCDIKAVVYDLQAKEKESLLCQHSEKLAIAFGLISTAAGEPLRIMKNLRVCSDCHSATKF 892

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS + GREIV+RD+ RFHH + G CSC D+W
Sbjct: 893 ISGLVGREIVVRDAYRFHHFRGGACSCEDFW 923



 Score =  275 bits (704), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 180/607 (29%), Positives = 311/607 (51%), Gaps = 24/607 (3%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  T++ L+  C R  +   G+ +H L+ R+ +E    +   L+++Y KCG   EA  +F
Sbjct: 39  DASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVF 98

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
           + + +K  +V+W+S+I      G   +A H+F EM   G  PN+  + AV+ AC +   V
Sbjct: 99  QGIQDK-SVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEV 157

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
                I   +  CG  + DV V  A+++ + K   DL+SA+ VFD +  ++   W  MI+
Sbjct: 158 ---DTIRARVEACGSLELDVIVATAVMNAYGKCG-DLDSAWGVFDGILVRDAAVWNAMIS 213

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
                    +A+ LF  M L G  P++ T    ++AC     F+   ++H++A       
Sbjct: 214 LLVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDA 273

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           D  V  +LV+MY K    G VDD+ ++F+R+ + +V+SW A++T    +G  DK A K F
Sbjct: 274 DTVVQTALVNMYGKF---GKVDDAEEIFERIQERDVVSWNAMLTANACNGFHDK-AFKCF 329

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG---RALDDCVGNSLISMY 433
            +M+     P+  T+ ++L AC         + V T AV+ G    ++D  +G ++++MY
Sbjct: 330 REMLLVGELPSRITYVAILNACFLAAHLKHGDFVKTLAVEGGCGIESVDVVMGTAIMNMY 389

Query: 434 ARSGRMEDARKAFES--LFEKN-----LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           +R    +  + AF S  L E++     ++ +NT++  Y +N   E+AF +   +   GV 
Sbjct: 390 SRC---KSPKSAFSSSLLLEQDRDQPSIMMWNTVLSLYVENEQFEEAFTIFRLMLLGGVT 446

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
               +  ++ +   S  ++ KG+ IH+ + +S       + NAL++MY+R  ++E A ++
Sbjct: 447 IDTVSLMTVFNACGSSASLEKGKWIHSLLTESELTRKTPVQNALVTMYARLGSLEDAREI 506

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  M  RNVISWT+M+   ++ G    AL IF  +L +G+ PN +T+ AVL+AC +   I
Sbjct: 507 FDAMTTRNVISWTAMVGVHSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASI 566

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
               K  ++   E G    +E    ++  LG+ GSL E   F + M +   V  W T + 
Sbjct: 567 PAA-KLVQACLSETGFFGNVEVANGLLCTLGKCGSLEEVANFFQVMAVKNQV-SWNTAIA 624

Query: 667 ACRVHGD 673
           A   HG+
Sbjct: 625 ANAQHGN 631



 Score = 93.2 bits (230), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 78/294 (26%), Positives = 125/294 (42%), Gaps = 51/294 (17%)

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
           A TFA+L+   + +  + +G +IH  I+++G E    +   L++MY +C + E A  VF+
Sbjct: 40  ASTFAALIHKCARLHDLAQGRRIHGLILRNGIEVGDFLGARLLAMYCKCGSPEEARAVFQ 99

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH------ 602
            ++D++V++WTS+I   A+ G    A  +F +M   G+ PN +TY+AVL AC H      
Sbjct: 100 GIQDKSVVAWTSLIGVNARSGHPKEAFHLFREMQLQGVMPNDVTYVAVLGACGHPWEVDT 159

Query: 603 ---------------------------AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
                                       G +   W  F  +     +V+    +  M+ L
Sbjct: 160 IRARVEACGSLELDVIVATAVMNAYGKCGDLDSAWGVFDGI-----LVRDAAVWNAMISL 214

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGA----CRVHGDTE-LGKHAAEMILEQDPQ 690
           L       EALE  R M L        T + A    C     +E L  HA    L  D  
Sbjct: 215 LVAHEQGDEALELFRQMRLGGVTPNKGTCVAALNACCHSRDFSEALRIHAFARELAGDA- 273

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW--IEADNKVHKFH 742
           D      L N+Y   G  +    I +R++ER+++     SW  +   N  + FH
Sbjct: 274 DTVVQTALVNMYGKFGKVDDAEEIFERIQERDVV-----SWNAMLTANACNGFH 322



 Score = 59.7 bits (143), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 51/215 (23%), Positives = 91/215 (42%), Gaps = 18/215 (8%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  ++A+     +  +G  P+  T++ +L +C    +    KLV + L+ +    N
Sbjct: 525 HSQLGLNREALRIFRSILLEGVAPNEVTFTAVLNACGNLASIPAAKLVQACLSETGFFGN 584

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N L+    KCG L E    F+ M  K   VSW++ I++    G  V  + +F  M 
Sbjct: 585 VEVANGLLCTLGKCGSLEEVANFFQVMAVKNQ-VSWNTAIAANAQHGNGVRGVELFQTMQ 643

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG-------HIIYGFLLKCGYFDSDVCVGCALIDM 225
             G          V+ +CS+   VA G       H+ YGF  +  ++    CV    ID+
Sbjct: 644 LEGIDTGSVTLIGVLSSCSHAGLVAQGYSYFLNMHVDYGFPAEAEHYS---CV----IDL 696

Query: 226 FVKGSVDLESAYKVFDKMT--EKNTVGWTLMITRC 258
             +    LE A +   ++   +++   W  ++  C
Sbjct: 697 LSRAGW-LEHAEEFVKRLPFGDQSVFPWITLLCGC 730


>gi|356552027|ref|XP_003544373.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g16860-like [Glycine max]
          Length = 986

 Score =  492 bits (1267), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 276/768 (35%), Positives = 431/768 (56%), Gaps = 62/768 (8%)

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W+ +I   ++ G   D   ++ +M  LG+ P+ Y F  V +AC+N  ++++G  ++  + 
Sbjct: 227 WNQLIRRALHLGSPRDVFTLYRQMKSLGWTPDHYTFPFVFKACANLSSLSLGASLHATVS 286

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK---NTVGWTLMITRCTQLGCP 264
           + G F S+V V  A++ M+ K    L  A+ +FD +  +   + V W  +++        
Sbjct: 287 RSG-FASNVFVCNAVVSMYGKCGA-LRHAHNMFDDLCHRGIQDLVSWNSVVSAYMWASDA 344

Query: 265 RDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             A+ LF  M     + PD  +L  ++ AC+ L     G+Q+H ++IR+GL  DV VG +
Sbjct: 345 NTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQVHGFSIRSGLVDDVFVGNA 404

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG----------------- 366
           +VDMYAKC   G ++++ KVF RM   +V+SW A++TGY Q+G                 
Sbjct: 405 VVDMYAKC---GKMEEANKVFQRMKFKDVVSWNAMVTGYSQAGRLEHALSLFERMTEENI 461

Query: 367 -----------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNV 406
                            G+  EA+ +F  M      PN  T  S+L AC   G LL    
Sbjct: 462 ELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLVSLLSACVSVGALLH--- 518

Query: 407 AEQVYTHAVKRGRALDDC--------VGNSLISMYARSGRMEDARKAFESLF--EKNLVS 456
            ++ + +A+K    LD          V N LI MYA+    E ARK F+S+   ++++V+
Sbjct: 519 GKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQSTEVARKMFDSVSPKDRDVVT 578

Query: 457 YNTMVDAYAKNLNSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +  M+  YA++ ++  A +L   +   D  +  + +T +  L   + + A+  G Q+HA 
Sbjct: 579 WTVMIGGYAQHGDANNALQLFSGMFKMDKSIKPNDFTLSCALVACARLAALRFGRQVHAY 638

Query: 515 IIKSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
           ++++ + S    + N LI MYS+  +V+ A  VF  M  RN +SWTS++TG+  HG    
Sbjct: 639 VLRNFYGSVMLFVANCLIDMYSKSGDVDTAQIVFDNMPQRNAVSWTSLMTGYGMHGRGED 698

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           AL +F +M    + P+GIT++ VL ACSH+G++  G   F  M  + G+    EHYACMV
Sbjct: 699 ALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFNRMSKDFGVDPGPEHYACMV 758

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA 693
           DL GR+G L EA++ I  MP+    +VW   L ACR+H + ELG+ AA  +LE +  +  
Sbjct: 759 DLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNVELGEFAANRLLELESGNDG 818

Query: 694 AHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLE 753
           ++ LLSN+YA+A  W+ VA IR  MK   + K  GCSWI+    V  F+VG+ SHP++ +
Sbjct: 819 SYTLLSNIYANARRWKDVARIRYTMKRTGIKKRPGCSWIQGRKGVATFYVGDRSHPQSQQ 878

Query: 754 IYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIR 813
           IY  L  L  +IK  GY+P T+F LH++++E+K   LF+HSEK+A+A+G+++     PIR
Sbjct: 879 IYETLADLIQRIKAIGYVPQTSFALHDVDDEEKGDLLFEHSEKLALAYGILTLHPRAPIR 938

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + KNLR+CGDCH+AI YIS +   EI+LRDS+RFHH K+G CSC  YW
Sbjct: 939 ITKNLRICGDCHSAITYISKIIEHEIILRDSSRFHHFKNGSCSCKGYW 986



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 172/613 (28%), Positives = 288/613 (46%), Gaps = 76/613 (12%)

Query: 26  QNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTL-DLMTQKGNHPDLDTYSLL 84
           + LPPS S  F         L      HL   R    +FTL   M   G  PD  T+  +
Sbjct: 215 ERLPPSPSSVFWWNQLIRRAL------HLGSPR---DVFTLYRQMKSLGWTPDHYTFPFV 265

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-- 142
            K+C    +  LG  +H+ ++RS    N  + N+++S+Y KCG L  A+ +F  + ++  
Sbjct: 266 FKACANLSSLSLGASLHATVSRSGFASNVFVCNAVVSMYGKCGALRHAHNMFDDLCHRGI 325

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF-CPNEYCFSAVIRACSNTENVAIGHI 201
           +D+VSW+S++S+Y+       A+ +F +M       P+      ++ AC++      G  
Sbjct: 326 QDLVSWNSVVSAYMWASDANTALALFHKMTTRHLMSPDVISLVNILPACASLAASLRGRQ 385

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD---------------------------- 232
           ++GF ++ G  D DV VG A++DM+ K G ++                            
Sbjct: 386 VHGFSIRSGLVD-DVFVGNAVVDMYAKCGKMEEANKVFQRMKFKDVVSWNAMVTGYSQAG 444

Query: 233 -LESAYKVFDKMTEKN----TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
            LE A  +F++MTE+N     V WT +IT   Q G   +A+ +F  M   G  P+  TL 
Sbjct: 445 RLEHALSLFERMTEENIELDVVTWTAVITGYAQRGQGCEALDVFRQMCDCGSRPNVVTLV 504

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLAL--------DVCVGCSLVDMYAKCTVDGSVDD 339
            ++SAC  +     GK+ H +AI+  L L        D+ V   L+DMYAKC    S + 
Sbjct: 505 SLLSACVSVGALLHGKETHCYAIKFILNLDGPDPGADDLKVINGLIDMYAKCQ---STEV 561

Query: 340 SRKVFDRM--LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ--GQVAPNHFTFASVL 395
           +RK+FD +   D +V++WT +I GY Q G  +  A++LFS M +    + PN FT +  L
Sbjct: 562 ARKMFDSVSPKDRDVVTWTVMIGGYAQHGDAN-NALQLFSGMFKMDKSIKPNDFTLSCAL 620

Query: 396 KACGNLLDSNVAEQVYTHAVKR--GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            AC  L       QV+ + ++   G  +   V N LI MY++SG ++ A+  F+++ ++N
Sbjct: 621 VACARLAALRFGRQVHAYVLRNFYGSVM-LFVANCLIDMYSKSGDVDTAQIVFDNMPQRN 679

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
            VS+ +++  Y  +   E A  +  E+    +     TF  +L   S  G +  G     
Sbjct: 680 AVSWTSLMTGYGMHGRGEDALRVFDEMRKVPLVPDGITFLVVLYACSHSGMVDHGINFFN 739

Query: 514 RIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG-- 569
           R+ K  G +     Y  ++ ++ R   +  A ++  EM  +   + W ++++    H   
Sbjct: 740 RMSKDFGVDPGPEHYACMVDLWGRAGRLGEAMKLINEMPMEPTPVVWVALLSACRLHSNV 799

Query: 570 ----FAA-RALEI 577
               FAA R LE+
Sbjct: 800 ELGEFAANRLLEL 812


>gi|357479991|ref|XP_003610281.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511336|gb|AES92478.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 783

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 268/753 (35%), Positives = 436/753 (57%), Gaps = 20/753 (2%)

Query: 116 LNSLISLYSKCGDLN---EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           L +L  L  K  D +    A  +F S+  K DI  ++ ++  +        +I ++  + 
Sbjct: 44  LATLTKLTQKLFDFSATRHARALFFSVP-KPDIFLFNVLVRGFSLNDSPSSSISLYTHLR 102

Query: 173 E-LGFCPNEYCFSAVIRACSNTENVAIGH---IIYGFLLKCGYFDSDVCVGCALIDMFVK 228
                 P+ + ++  + ACSN +++ + H   II G+        S+V VG AL+D++ K
Sbjct: 103 RNTNLSPDNFTYAFAVAACSNDKHLMLLHAHSIIDGY-------GSNVFVGSALVDLYCK 155

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            S  +  A KVFD M E++TV W  MI    +  C  D+I+LF +M+  G   D  T++ 
Sbjct: 156 FS-RVVYARKVFDGMPERDTVLWNTMINGLVKNCCFDDSIQLFREMVADGVRVDSSTVTA 214

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+ A +EL+    G  +   A++ G      V   L+ +Y+KC   G V+ +R +F R+ 
Sbjct: 215 VLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKC---GDVNTARLLFRRIN 271

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +++++ A+I+G+  +GG +  +VKLF +++      +  T   ++         ++A 
Sbjct: 272 RPDLIAYNAMISGFTANGGTEC-SVKLFRELLFSGERVSSSTIVGLIPLHSPFGHLHLAC 330

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            ++   VK G  L+  V  +  ++Y +   ++ AR  F+   EK +V++N M+  Y +N 
Sbjct: 331 SIHGFCVKSGIILNPTVSTAFTAIYNKLNEIDLARHLFDESPEKTVVAWNAMISGYTQNG 390

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           ++E A  L  E+  T    +A T  ++LS  + +G++  G+ +H  I     E N  +  
Sbjct: 391 STETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPNIYVST 450

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ MY++C N+  A+Q+F  M ++N ++W +MI G+  HG+   AL+++ +ML  G  P
Sbjct: 451 ALVDMYAKCGNISEAWQLFDSMSEKNTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNP 510

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + +T+++VL ACSHAGL+ EG + F +M +++ I   +EHYACMVD+LGRSG L +ALEF
Sbjct: 511 SAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEF 570

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ MP+     VW T LGAC +H DT++ + A+E + E DP     ++LLSN+Y+   ++
Sbjct: 571 IKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFELDPGSVGYYVLLSNIYSVERNF 630

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
              A+IR+ +K+R L K  GC+ IE +   H F  G+ SH    +IYA+L++L  K++E 
Sbjct: 631 PKAASIRQVVKKRKLAKSPGCTLIEVNGTPHVFVSGDRSHSHATDIYAKLEKLTGKMREM 690

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY  +T   LH++EEE+K   +  HSEK+A+AFGLI+T     IR+ KNLRVC DCHTA 
Sbjct: 691 GYQAETVPALHDVEEEEKELAVNVHSEKLAIAFGLITTEPGNEIRIIKNLRVCLDCHTAT 750

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS +T R IV+RD+NRFHH KDG CSC DYW
Sbjct: 751 KFISKITERVIVVRDANRFHHFKDGICSCGDYW 783



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 142/519 (27%), Positives = 250/519 (48%), Gaps = 15/519 (2%)

Query: 36  FIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F + P     L N L+  + LND           L       PD  TY+  + +C  S +
Sbjct: 67  FFSVPKPDIFLFNVLVRGFSLNDSPSSSISLYTHLRRNTNLSPDNFTYAFAVAAC--SND 124

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
            HL  L+H+         N  + ++L+ LY K   +  A K+F  M  +RD V W++MI+
Sbjct: 125 KHL-MLLHAHSIIDGYGSNVFVGSALVDLYCKFSRVVYARKVFDGM-PERDTVLWNTMIN 182

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
             V      D+I +F EM+  G   +    +AV+ A +  + + +G  I    LK G+  
Sbjct: 183 GLVKNCCFDDSIQLFREMVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGF 242

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
            D  V   LI ++ K   D+ +A  +F ++   + + +  MI+  T  G    +++LF +
Sbjct: 243 CDY-VLTGLISLYSKCG-DVNTARLLFRRINRPDLIAYNAMISGFTANGGTECSVKLFRE 300

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           ++ SG      T+ G++   S          +H + +++G+ L+  V  +   +Y K   
Sbjct: 301 LLFSGERVSSSTIVGLIPLHSPFGHLHLACSIHGFCVKSGIILNPTVSTAFTAIYNKLN- 359

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
              +D +R +FD   +  V++W A+I+GY Q+G  +  A+ LF +M++ +  PN  T  +
Sbjct: 360 --EIDLARHLFDESPEKTVVAWNAMISGYTQNGSTET-AISLFKEMMKTEFTPNAVTITT 416

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEK 452
           +L AC  L   +  + V+ H +K      +  V  +L+ MYA+ G + +A + F+S+ EK
Sbjct: 417 ILSACAQLGSLSFGKWVH-HLIKSENLEPNIYVSTALVDMYAKCGNISEAWQLFDSMSEK 475

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI- 511
           N V++NTM+  Y  +    +A +L +E+   G   SA TF S+L   S  G +G+GE+I 
Sbjct: 476 NTVTWNTMIFGYGLHGYGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIF 535

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           H  + K   E     Y  ++ +  R   +E A +  K+M
Sbjct: 536 HNMVNKYRIEPLIEHYACMVDILGRSGQLEKALEFIKKM 574



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 211/419 (50%), Gaps = 20/419 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G   D  T + +L +    +   +G  +  L  +        +L  LISLYSKCGD
Sbjct: 200 MVADGVRVDSSTVTAVLPAAAELQELKVGMGIQCLALKIGFGFCDYVLTGLISLYSKCGD 259

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +N A  +F+ + N+ D++++++MIS +   G    ++ +F E+L  G   +      +I 
Sbjct: 260 VNTARLLFRRI-NRPDLIAYNAMISGFTANGGTECSVKLFRELLFSGERVSSSTIVGLIP 318

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
             S   ++ +   I+GF +K G   +   V  A   ++ K   +DL  A  +FD+  EK 
Sbjct: 319 LHSPFGHLHLACSIHGFCVKSGIILNPT-VSTAFTAIYNKLNEIDL--ARHLFDESPEKT 375

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  MI+  TQ G    AI LF +M+ + F P+  T++ ++SAC++L   + GK +H 
Sbjct: 376 VVAWNAMISGYTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHH 435

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
                 L  ++ V  +LVDMYAKC   G++ ++ ++FD M + N ++W  +I GY    G
Sbjct: 436 LIKSENLEPNIYVSTALVDMYAKC---GNISEAWQLFDSMSEKNTVTWNTMIFGY-GLHG 491

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
              EA+KL+++M+     P+  TF SVL AC +       E+++ + V + R ++  + +
Sbjct: 492 YGHEALKLYNEMLHLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYR-IEPLIEH 550

Query: 428 --SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMV-------DAYAKNLNSEKAFEL 476
              ++ +  RSG++E A +  + +  E     + T++       D     L SE+ FEL
Sbjct: 551 YACMVDILGRSGQLEKALEFIKKMPVEPGPAVWGTLLGACMIHKDTDIARLASERLFEL 609



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 105/207 (50%), Gaps = 3/207 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  + AI     M +    P+  T + +L +C +  +   GK VH L+    LEPN
Sbjct: 386 YTQNGSTETAISLFKEMMKTEFTPNAVTITTILSACAQLGSLSFGKWVHHLIKSENLEPN 445

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +L+ +Y+KCG+++EA ++F SM  K + V+W++MI  Y   G   +A+ ++ EML
Sbjct: 446 IYVSTALVDMYAKCGNISEAWQLFDSMSEK-NTVTWNTMIFGYGLHGYGHEALKLYNEML 504

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            LG+ P+   F +V+ ACS+   V  G  I+  ++     +  +     ++D+  + S  
Sbjct: 505 HLGYNPSAVTFLSVLYACSHAGLVGEGEEIFHNMVNKYRIEPLIEHYACMVDILGR-SGQ 563

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRC 258
           LE A +   KM  E     W  ++  C
Sbjct: 564 LEKALEFIKKMPVEPGPAVWGTLLGAC 590


>gi|255585601|ref|XP_002533488.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526650|gb|EEF28892.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 939

 Score =  492 bits (1266), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 250/733 (34%), Positives = 442/733 (60%), Gaps = 10/733 (1%)

Query: 54  LNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           L +G  +K+I   LD+   +    D  T++++LK+C    +  LG  VH L+ R     +
Sbjct: 151 LQNGECRKSIDVFLDMGRSEEVGFDQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFYKD 210

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V  ++L+ +Y+KC  L+++ KIF  +  K + V WS++I+  V   + +  + +F EM 
Sbjct: 211 VVTGSALLDMYAKCKRLDDSLKIFSEIPVK-NWVCWSAIIAGCVQNDEHILGLELFKEMQ 269

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           ++G   ++  +++V R+C+    + +G  ++   LKC  F SD+ VG A +DM+ K GS 
Sbjct: 270 KVGIGVSQSIYASVFRSCAGLSALKVGTQLHAHALKCD-FGSDITVGTATLDMYAKCGS- 327

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A ++F+ + + +   +  +I  C +     +A++ F  ++ SG   +  +LSG  S
Sbjct: 328 -LADAQRIFNSLPKHSLQCYNAIIVGCVRNEKGFEALQFFQLLLKSGLGFNEISLSGAFS 386

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ ++    G+QLHS ++++ L  ++CV  S++DMY KC    ++ ++  +FD M   +
Sbjct: 387 ACASIKGDLDGRQLHSLSVKSTLRSNICVANSILDMYGKCE---ALSEACCMFDEMERRD 443

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            +SW A+I  + Q+G  ++E + LF+ M++ ++ P+ FT+ SVLKAC +    N   +++
Sbjct: 444 AVSWNAVIAAHEQNG-NEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIH 502

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K G  LD  VG +LI MY + G +E+A+K  + + ++ +VS+N ++  +    +SE
Sbjct: 503 NRIIKSGLGLDSFVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSE 562

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            A    +E+    V    +T+A +L   +++ ++G G+QIH +IIK    S+  I + L+
Sbjct: 563 DAHSFFYEMLKMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLELHSDVYITSTLV 622

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MYS+C N++ +  VF++  +++ ++W +MI G+A+HG    AL  F +M  + ++PN  
Sbjct: 623 DMYSKCGNMQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHA 682

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++++L AC+H G I +G  +F +M  E+G+  ++EHY+CM+D++GRSG ++EAL+ I+ 
Sbjct: 683 TFVSILRACAHMGFIDKGLHYFNAMLTEYGLEPQIEHYSCMIDIIGRSGRISEALKLIQE 742

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP  AD ++WRT L  C++HG+ E+ + A   IL+ +P+D +A ILLSN+YA AG W  V
Sbjct: 743 MPFEADAVIWRTLLSICKIHGNIEIAEKATNAILQLEPEDSSACILLSNIYADAGMWGKV 802

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           + +RK M+   L KE GCSWIE  ++VH F VG  +HP+  EIY  L  L  ++K  GY+
Sbjct: 803 SEMRKMMRYNKLKKEPGCSWIEVKDEVHAFLVGNKTHPRYEEIYKILSVLLDEMKWIGYI 862

Query: 772 PDTNFVLHELEEE 784
           PD +F++ E  EE
Sbjct: 863 PDIDFLIDEESEE 875



 Score =  273 bits (699), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 175/642 (27%), Positives = 321/642 (50%), Gaps = 58/642 (9%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           + T+S +++ C    +   GK  H+ +  S   P+  I N L+ +Y +C  LN A K+F+
Sbjct: 43  IRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNYAYKVFE 102

Query: 138 SMGN------------------------------KRDIVSWSSMISSYVNRGKQVDAIHM 167
            M                                KRD+VSW+SM+S ++  G+   +I +
Sbjct: 103 KMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGECRKSIDV 162

Query: 168 FVEM---LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           F++M    E+GF  ++  F+ V++ACS  E+  +G  ++G +++ G++  DV  G AL+D
Sbjct: 163 FLDMGRSEEVGF--DQTTFAVVLKACSVLEDGGLGIQVHGLIVRMGFY-KDVVTGSALLD 219

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K    L+ + K+F ++  KN V W+ +I  C Q       + LF +M   G    + 
Sbjct: 220 MYAKCK-RLDDSLKIFSEIPVKNWVCWSAIIAGCVQNDEHILGLELFKEMQKVGIGVSQS 278

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
             + V  +C+ L     G QLH+ A++     D+ VG + +DMYAKC   GS+ D++++F
Sbjct: 279 IYASVFRSCAGLSALKVGTQLHAHALKCDFGSDITVGTATLDMYAKC---GSLADAQRIF 335

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           + +  H++  + AII G V++  +  EA++ F  +++  +  N  + +    AC ++   
Sbjct: 336 NSLPKHSLQCYNAIIVGCVRN-EKGFEALQFFQLLLKSGLGFNEISLSGAFSACASIKGD 394

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
               Q+++ +VK     + CV NS++ MY +   + +A   F+ +  ++ VS+N ++ A+
Sbjct: 395 LDGRQLHSLSVKSTLRSNICVANSILDMYGKCEALSEACCMFDEMERRDAVSWNAVIAAH 454

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
            +N N E+   L   +    +    +T+ S+L   SS  A+  G +IH RIIKSG   + 
Sbjct: 455 EQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLDS 514

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            +  ALI MY +C  +E A ++   +E + ++SW ++I GF     +  A   FY+ML  
Sbjct: 515 FVGGALIDMYCKCGMIEEAKKIHDRIEQQTMVSWNAIIAGFTLLKHSEDAHSFFYEMLKM 574

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY------ACMVDLLGR 638
            +KP+  TY  VL AC++   +  G +        HG + ++E +      + +VD+  +
Sbjct: 575 SVKPDNFTYAIVLDACANLASVGLGKQI-------HGQIIKLELHSDVYITSTLVDMYSK 627

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            G++ ++       P + D + W   +     HG   LG+ A
Sbjct: 628 CGNMQDSALVFEKAP-NKDFVTWNAMICGYAQHG---LGEEA 665



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/315 (26%), Positives = 156/315 (49%), Gaps = 18/315 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H  +G  ++ +     M +    PD  TY  +LK+C   +  + G  +H+ + +S L  +
Sbjct: 454 HEQNGNEEETLNLFASMLRLRMEPDQFTYGSVLKACSSQQALNSGMEIHNRIIKSGLGLD 513

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S +  +LI +Y KCG + EA KI   +  ++ +VSW+++I+ +       DA   F EML
Sbjct: 514 SFVGGALIDMYCKCGMIEEAKKIHDRI-EQQTMVSWNAIIAGFTLLKHSEDAHSFFYEML 572

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           ++   P+ + ++ V+ AC+N  +V +G  I+G ++K     SDV +   L+DM+ K   +
Sbjct: 573 KMSVKPDNFTYAIVLDACANLASVGLGKQIHGQIIKLE-LHSDVYITSTLVDMYSKCG-N 630

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ +  VF+K   K+ V W  MI    Q G   +A+  F  M L    P+  T   ++ A
Sbjct: 631 MQDSALVFEKAPNKDFVTWNAMICGYAQHGLGEEALGYFERMQLENVRPNHATFVSILRA 690

Query: 293 CSELELFTSGKQLHSW-AIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDR 346
           C+ +     G  LH + A+ T   L+       ++ Y+ C +D     G + ++ K+   
Sbjct: 691 CAHMGFIDKG--LHYFNAMLTEYGLE-----PQIEHYS-CMIDIIGRSGRISEALKLIQE 742

Query: 347 M-LDHNVMSWTAIIT 360
           M  + + + W  +++
Sbjct: 743 MPFEADAVIWRTLLS 757



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 106/233 (45%), Gaps = 46/233 (19%)

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           T + T   TF+ ++   S   ++  G+Q HAR+I SGF  +  I N L+ MY RC+++  
Sbjct: 37  TKLPTKIRTFSHIIQECSDYNSLKPGKQAHARMIVSGFIPDVYISNCLMKMYLRCSHLNY 96

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM----------LADGIKPNG-- 590
           A++VF++M  R+VIS+ +MI+G+A  G    A E FY            +  G   NG  
Sbjct: 97  AYKVFEKMSQRDVISYNTMISGYADAGEMNLANEFFYDTPKRDVVSWNSMLSGFLQNGEC 156

Query: 591 --------------------ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY- 629
                                T+  VL ACS   ++ +G    +     HG++ RM  Y 
Sbjct: 157 RKSIDVFLDMGRSEEVGFDQTTFAVVLKACS---VLEDGGLGIQV----HGLIVRMGFYK 209

Query: 630 -----ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
                + ++D+  +   L ++L+    +P+  + + W   +  C  + +  LG
Sbjct: 210 DVVTGSALLDMYAKCKRLDDSLKIFSEIPVK-NWVCWSAIIAGCVQNDEHILG 261


>gi|225434622|ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 267/712 (37%), Positives = 402/712 (56%), Gaps = 43/712 (6%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           ++I  CS T+ +     I+  +L+ G F         +    +     L+ A +VFD++ 
Sbjct: 40  SLIDQCSETKQLKQ---IHAQMLRTGLFFDPFSASRLITAAALSPFPSLDYAQQVFDQIP 96

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGK 303
             N   W  +I        P  ++ +FL M+  S   PD+FT   ++ A SELE   +GK
Sbjct: 97  HPNLYTWNTLIRAYASSSNPHQSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGK 156

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
             H   I+  L  DV +  SL+  YAKC   G +    +VF  +   +V+SW ++IT +V
Sbjct: 157 AFHGMVIKVLLGSDVFILNSLIHFYAKC---GELGLGYRVFVNIPRRDVVSWNSMITAFV 213

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           Q GG  +EA++LF +M    V PN  T   VL AC    D      V+++ ++R R  + 
Sbjct: 214 Q-GGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSY-IERNRIGES 271

Query: 424 -CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK---------------N 467
             + N+++ MY + G +EDA++ F+ + EK++VS+ TM+  YAK               N
Sbjct: 272 LTLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPN 331

Query: 468 LN----------------SEKAFELLHEIEDTGVG-TSAYTFASLLSGASSIGAIGKGEQ 510
            +                 ++A EL HE++ +        T  S LS  + +GA+  G  
Sbjct: 332 QDIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGW 391

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IH  I K G + N  +  +LI MY +C +++ A  VF  +E ++V  W++MI G A HG 
Sbjct: 392 IHVYIKKQGMKLNCHLTTSLIDMYCKCGDLQKALMVFHSVERKDVFVWSAMIAGLAMHGH 451

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+ +F KM  D +KPN +T+  +L ACSH GL+ EG   F  M   +G++  ++HYA
Sbjct: 452 GKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFNQMELVYGVLPGVKHYA 511

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           CMVD+LGR+G L EA+E I  MP++    VW   LGAC +H +  L + A   ++E +P 
Sbjct: 512 CMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQLIELEPG 571

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           +  A++LLSN+YA AG W+ V+ +RK M++  L KE GCS IE D  VH+F VG+ SHP 
Sbjct: 572 NHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLVGDNSHPS 631

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ-KVQYLFQHSEKIAVAFGLISTSKS 809
             +IYA+LD++  +++  GY+P+ + +L  +EEE  K Q LF HSEK+A+AFGLIST +S
Sbjct: 632 AKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEEDVKEQALFLHSEKLAIAFGLISTGQS 691

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +PIR+ KNLRVCGDCH+  K +S +  REI+LRD  RFHH ++G CSC DYW
Sbjct: 692 QPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDYW 743



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 236/531 (44%), Gaps = 85/531 (16%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q  +  L ++ Q  + PD  T+  L+K+         GK  H ++ +  L  +  ILNSL
Sbjct: 118 QSLLIFLRMLHQSPDFPDKFTFPFLIKAASELEELFTGKAFHGMVIKVLLGSDVFILNSL 177

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I  Y+KCG+L    ++F ++  +RD+VSW+SMI+++V  G   +A+ +F EM      PN
Sbjct: 178 IHFYAKCGELGLGYRVFVNI-PRRDVVSWNSMITAFVQGGCPEEALELFQEMETQNVKPN 236

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
                 V+ AC+   +   G  ++ ++ +       + +  A++DM+ K GSV  E A +
Sbjct: 237 GITMVGVLSACAKKSDFEFGRWVHSYIER-NRIGESLTLSNAMLDMYTKCGSV--EDAKR 293

Query: 239 VFDKMTEKNTVGWTLM-------------------------------ITRCTQLGCPRDA 267
           +FDKM EK+ V WT M                               I+   Q G P++A
Sbjct: 294 LFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQDIAAWNALISAYEQCGKPKEA 353

Query: 268 IRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           + LF ++ LS    PD  TL   +SAC++L     G  +H +  + G+ L+  +  SL+D
Sbjct: 354 LELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWIHVYIKKQGMKLNCHLTTSLID 413

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MY KC   G +  +  VF  +   +V  W+A+I G     G  K+A+ LFS M + +V P
Sbjct: 414 MYCKC---GDLQKALMVFHSVERKDVFVWSAMIAGLAMH-GHGKDAIALFSKMQEDKVKP 469

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N  TF ++L AC ++                                   G +E+ R  F
Sbjct: 470 NAVTFTNILCACSHV-----------------------------------GLVEEGRTFF 494

Query: 447 ESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
             +         +  Y  MVD   +    E+A EL   IE   +  +A  + +LL   + 
Sbjct: 495 NQMELVYGVLPGVKHYACMVDILGRAGLLEEAVEL---IEKMPMAPAASVWGALLGACTI 551

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
              +   EQ  +++I+     NH  Y  L ++Y++    +    + K M D
Sbjct: 552 HENVVLAEQACSQLIELE-PGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRD 601



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 81/330 (24%), Positives = 151/330 (45%), Gaps = 45/330 (13%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +  G  ++A+     M  +   P+  T   +L +C +  +F  G+ VHS + R+++  + 
Sbjct: 213 VQGGCPEEALELFQEMETQNVKPNGITMVGVLSACAKKSDFEFGRWVHSYIERNRIGESL 272

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------R 143
            + N+++ +Y+KCG + +A ++F  M  K                              +
Sbjct: 273 TLSNAMLDMYTKCGSVEDAKRLFDKMPEKDIVSWTTMLVGYAKIGEYDAAQGIFDAMPNQ 332

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           DI +W+++IS+Y   GK  +A+ +F E+ L     P+E    + + AC+    + +G  I
Sbjct: 333 DIAAWNALISAYEQCGKPKEALELFHELQLSKTAKPDEVTLVSTLSACAQLGAMDLGGWI 392

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           + ++ K G    +  +  +LIDM+ K   DL+ A  VF  +  K+   W+ MI      G
Sbjct: 393 HVYIKKQG-MKLNCHLTTSLIDMYCKCG-DLQKALMVFHSVERKDVFVWSAMIAGLAMHG 450

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             +DAI LF  M      P+  T + ++ ACS + L   G+   +   +  L   V  G 
Sbjct: 451 HGKDAIALFSKMQEDKVKPNAVTFTNILCACSHVGLVEEGRTFFN---QMELVYGVLPG- 506

Query: 323 SLVDMYAKCTVD-----GSVDDSRKVFDRM 347
             V  YA C VD     G ++++ ++ ++M
Sbjct: 507 --VKHYA-CMVDILGRAGLLEEAVELIEKM 533


>gi|225459793|ref|XP_002284799.1| PREDICTED: pentatricopeptide repeat-containing protein At2g33680
           [Vitis vinifera]
 gi|302141693|emb|CBI18896.3| unnamed protein product [Vitis vinifera]
          Length = 703

 Score =  491 bits (1265), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 271/689 (39%), Positives = 412/689 (59%), Gaps = 14/689 (2%)

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
           +R+   GK +H+ + +S       I NSL++LY+KC  L EA  +F+ + NK D+VSW+ 
Sbjct: 19  NRSLQKGKALHAQIIKSS-SSCVYIANSLVNLYAKCQRLREAKFVFERIQNK-DVVSWNC 76

Query: 151 MISSYVNRGKQVDA--IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           +I+ Y   G    +  + +F  M      PN + F+ V  A S   + A G + +   +K
Sbjct: 77  IINGYSQHGPSGSSHVMELFQRMRAENTAPNAHTFAGVFTAASTLVDAAGGRLAHAVAIK 136

Query: 209 CGYFDS--DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
               DS  DV VG +L++M+ K  +  E A KVFD M E+N+V W  MI+         +
Sbjct: 137 ---MDSCRDVFVGSSLMNMYCKAGLTPE-ARKVFDTMPERNSVSWATMISGYASQKLAAE 192

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+ LF  M       + F  + V+SA +  EL  +GKQ+H  A++ GL   V VG +LV 
Sbjct: 193 ALGLFRLMRREEEGENEFVFTSVLSALTLPELVNNGKQIHCIAVKNGLLSIVSVGNALVT 252

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MYAKC   GS+DD+ + F+   D N ++W+A+ITGY QSG  DK A+KLFS M    + P
Sbjct: 253 MYAKC---GSLDDALQTFETSSDKNSITWSAMITGYAQSGDSDK-ALKLFSSMHLSGIRP 308

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           + FTF  V+ AC +L  +   +QV+ + +K G      V  +L+ MYA+   + DARK F
Sbjct: 309 SEFTFVGVINACSDLGAAWEGKQVHDYLLKLGFESQIYVMTALVDMYAKCSSIVDARKGF 368

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + L E ++V + +M+  Y +N  +E A  L   +E  G+  +  T AS+L   SS+ A+ 
Sbjct: 369 DYLQEPDIVLWTSMIGGYVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALE 428

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G+QIHAR +K GF     I +AL +MY++C  ++    VF+ M  R+VISW +MI+G +
Sbjct: 429 QGKQIHARTVKYGFGLEVPIGSALSTMYAKCGCLKDGTLVFRRMPARDVISWNAMISGLS 488

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           ++G    ALE+F +M  +G KP+ +T++ +LSACSH GL+  GW +FR M+DE G+  R+
Sbjct: 489 QNGCGKEALELFEEMQLEGTKPDYVTFVNILSACSHMGLVERGWGYFRMMFDEFGMDPRV 548

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHYACMVD+L R+G L EA+EF  S  +   + +WR  LGACR + + ELG +A E ++E
Sbjct: 549 EHYACMVDILSRAGKLKEAIEFTESATIDHGMCLWRIILGACRNYRNYELGAYAGEKLME 608

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
              Q+ +A++LLS++Y++ G WE V  +R+ MK R + KE GCSWIE  + VH F V + 
Sbjct: 609 LGSQESSAYVLLSSIYSALGRWEDVERVRRMMKLRGVSKEPGCSWIELKSGVHVFVVKDQ 668

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTN 775
            HP+  +I+ EL QL+ ++K+ GY P T+
Sbjct: 669 MHPQIGDIHVELRQLSKQMKDEGYEPATD 697



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 39/140 (27%), Positives = 71/140 (50%), Gaps = 1/140 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G  + A+     M  +G  P+  T + +LK+C        GK +H+   +      
Sbjct: 386 YVQNGENEDALSLYGRMEMEGILPNELTMASVLKACSSLAALEQGKQIHARTVKYGFGLE 445

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I ++L ++Y+KCG L +   +F+ M   RD++SW++MIS     G   +A+ +F EM 
Sbjct: 446 VPIGSALSTMYAKCGCLKDGTLVFRRM-PARDVISWNAMISGLSQNGCGKEALELFEEMQ 504

Query: 173 ELGFCPNEYCFSAVIRACSN 192
             G  P+   F  ++ ACS+
Sbjct: 505 LEGTKPDYVTFVNILSACSH 524


>gi|115443695|ref|NP_001045627.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|50252103|dbj|BAD28089.1| putative pentatricopeptide (PPR) repeat-containing protein-like
           protein [Oryza sativa Japonica Group]
 gi|113535158|dbj|BAF07541.1| Os02g0106300 [Oryza sativa Japonica Group]
 gi|215766741|dbj|BAG98969.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 751

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 246/656 (37%), Positives = 383/656 (58%), Gaps = 36/656 (5%)

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSEL 296
           ++F  M E++ V +  +IT  +  G P  +++L+  ++      P R TLS ++   S L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--------- 347
                G  +H   +R G      VG  LVDMYAK    G + D+R+VF  M         
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKM---GLIRDARRVFQEMEAKTVVMYN 216

Query: 348 ----------------------LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
                                 +D + ++WT ++TG  Q+G    EA+ +F  M    V 
Sbjct: 217 TLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG-LQLEALDVFRRMRAEGVG 275

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            + +TF S+L ACG L      +Q++ +  +     +  VG++L+ MY++   +  A   
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  +  +N++S+  M+  Y +N  SE+A     E++  G+    +T  S++S  +++ ++
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
            +G Q H   + SG      + NAL+++Y +C ++E A ++F EM   + +SWT+++TG+
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           A+ G A   +++F KMLA+G+KP+G+T+I VLSACS AGL+ +G  +F SM  +HGIV  
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPI 515

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
            +HY CM+DL  RSG   EA EFI+ MP S D   W T L +CR+ G+ E+GK AAE +L
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLL 575

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
           E DPQ+PA+++LL +++A+ G W  VA++R+ M++R + KE GCSWI+  NKVH F   +
Sbjct: 576 ETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADD 635

Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
            SHP +  IY +L+ L  K+ E GY PD + VLH++ +  KV  +  HSEK+A+AFGLI 
Sbjct: 636 QSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIF 695

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             +  PIR+ KNLRVC DCH A K+IS +TGR+I++RD+ RFH   DG CSC D+W
Sbjct: 696 VPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 247/505 (48%), Gaps = 70/505 (13%)

Query: 108 KLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           ++E  +V++ N+LI+   +C  + +A  +F+ M + RD ++W++M++     G Q++A+ 
Sbjct: 206 EMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALD 264

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M   G   ++Y F +++ AC     +  G  I+ ++ +  Y D +V VG AL+DM+
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYED-NVFVGSALVDMY 323

Query: 227 VK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
            K  S+ L  A  VF +MT +N + WT MI    Q  C  +A+R F +M + G  PD FT
Sbjct: 324 SKCRSIRLAEA--VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L  V+S+C+ L     G Q H  A+ +GL   + V  +LV +Y KC   GS++D+ ++FD
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKC---GSIEDAHRLFD 438

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M  H+ +SWTA++TGY Q  G+ KE + LF  M+   + P+  TF  VL AC       
Sbjct: 439 EMSFHDQVSWTALVTGYAQF-GKAKETIDLFEKMLANGLKPDGVTFIGVLSAC------- 490

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV-----SYNTM 460
                                       +R+G +E     F+S+ + + +      Y  M
Sbjct: 491 ----------------------------SRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCM 522

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +D Y+++   ++A E + ++  +     A+ +A+LLS     G +  G+     ++++  
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGKWAAENLLETD- 578

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV--------ISWTSMITGFA----KH 568
             N   Y  L SM++          + + M DR V        I + + +  F+     H
Sbjct: 579 PQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 638

Query: 569 GFAARALE----IFYKMLADGIKPN 589
            F++R  E    +  KM  +G KP+
Sbjct: 639 PFSSRIYEKLEWLNSKMAEEGYKPD 663



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 40/374 (10%)

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVL 395
           V D  ++F  M + + +S+ A+ITG+  S G    +V+L+  +++ + V P   T ++++
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGF-SSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
                L D  +   V+   ++ G      VG+ L+ MYA+ G + DAR+ F+ +  K +V
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 456 SYN-------------------------------TMVDAYAKNLNSEKAFELLHEIEDTG 484
            YN                               TMV    +N    +A ++   +   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           VG   YTF S+L+   ++ A+ +G+QIHA I ++ +E N  + +AL+ MYS+C ++  A 
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            VF+ M  RN+ISWT+MI G+ ++  +  A+  F +M  DGIKP+  T  +V+S+C++  
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            + EG   F  +    G+++ +     +V L G+ GS+ +A      M    D + W   
Sbjct: 394 SLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTAL 451

Query: 665 LGACRVHGDTELGK 678
                V G  + GK
Sbjct: 452 -----VTGYAQFGK 460



 Score =  127 bits (318), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 45/351 (12%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M  +G   D  T+  +L +C        GK +H+ +TR+  E N  
Sbjct: 255 QNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVF 314

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKC  +  A  +F+ M   R+I+SW++MI  Y       +A+  F EM   
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P+++   +VI +C+N  ++  G   +   L  G     + V  AL+ ++ K GS+  
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY-ITVSNALVTLYGKCGSI-- 430

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+++FD+M+  + V WT ++T   Q G  ++ I LF  M+ +G  PD  T  GV+SAC
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC 490

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S                R GL   V  GC   D   K      +DD              
Sbjct: 491 S----------------RAGL---VEKGCDYFDSMQKDHGIVPIDD-------------- 517

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL 401
            +T +I  Y +S GR KEA +    M     +P+ F +A++L +C   GN+
Sbjct: 518 HYTCMIDLYSRS-GRFKEAEEFIKQMPH---SPDAFGWATLLSSCRLRGNM 564



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 136/306 (44%), Gaps = 73/306 (23%)

Query: 427 NSLISMYARSGRMEDARKAF---------------------------ESLF----EKNLV 455
           N L++ YA+SGR+  AR+ F                           E LF    E++ V
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111

Query: 456 SYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           SYN ++  ++   +  ++ +L    + +  V  +  T ++++  AS++     G  +H +
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME----------------------- 551
           +++ GF +   + + L+ MY++   +  A +VF+EME                       
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231

Query: 552 --------DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
                   DR+ I+WT+M+TG  ++G    AL++F +M A+G+  +  T+ ++L+AC   
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 604 GLISEGWKHF----RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
             + EG +      R+ Y+++  V      + +VD+  +  S+  A    R M    +++
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVG-----SALVDMYSKCRSIRLAEAVFRRMTCR-NII 345

Query: 660 VWRTFL 665
            W   +
Sbjct: 346 SWTAMI 351


>gi|449469198|ref|XP_004152308.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
 gi|449484855|ref|XP_004156999.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Cucumis sativus]
          Length = 724

 Score =  491 bits (1264), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 245/607 (40%), Positives = 376/607 (61%), Gaps = 49/607 (8%)

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C +      GKQ+H+  I+T  ++ + +   L+DMYAKC   GS+ D+ KVFD M+  ++
Sbjct: 129 CLKQRALKEGKQVHA-HIKTSGSIGLYISNRLLDMYAKC---GSLVDAEKVFDEMVHRDL 184

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN--HFTFASVLKAC------------ 398
            SW  +I+GYV+ GG  ++A  LF  M      PN  +F++ +++  C            
Sbjct: 185 CSWNIMISGYVK-GGNFEKARNLFDKM------PNRDNFSWTAIISGCVQHNRPEEALEL 237

Query: 399 ------------------------GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
                                     +   ++ ++++ H ++ G   D+ V  SL+ MY 
Sbjct: 238 YRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMGLDSDEVVWCSLLDMYG 297

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +E+AR  F+ + E+++VS+ TM+  Y KN   E+ F L   + ++ +  + +TFA 
Sbjct: 298 KCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMNSNIMPNDFTFAG 357

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L+  + + A   G+QIHA +++ GF+S     +AL+ MYS+C ++E A  VF+ +   +
Sbjct: 358 VLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKCGDIENAKSVFEILPQPD 417

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           + SWTS++ G+A+HG   +AL  F  +L  G KP+GI +I VLSAC+HAGL+ +G ++F 
Sbjct: 418 LFSWTSLLVGYAQHGQHDKALHFFELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFH 477

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           S+ ++HG+ + ++HYAC++DLL R+G  TEA   I  MP+  D  +W   LG CR+HG+ 
Sbjct: 478 SIKEKHGLTRTIDHYACIIDLLARAGQFTEAESIINEMPIKPDKYIWAALLGGCRIHGNL 537

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           EL K AA+ + E +P++PA ++ L+N+YASAG     ANIR+ M  R ++K+ G SWIE 
Sbjct: 538 ELAKRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGMSWIEI 597

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
             +VH F VG+ SHPK+ EI   L +L+ ++KE GY+PDTNFVLH++E EQK + L  HS
Sbjct: 598 RREVHVFSVGDNSHPKSKEILEYLSELSKRMKEVGYVPDTNFVLHDVELEQKEENLSYHS 657

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           EK+AVAFG+IST    PI+VFKNLR C DCH AIK+IS +TGR+I++RDSNRFH  + G 
Sbjct: 658 EKLAVAFGIISTPSGTPIKVFKNLRTCVDCHNAIKFISNITGRKIIVRDSNRFHCFEGGS 717

Query: 855 CSCNDYW 861
           CSC DYW
Sbjct: 718 CSCKDYW 724



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 147/532 (27%), Positives = 242/532 (45%), Gaps = 102/532 (19%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P    Y  LLK C++ R    GK VH+ +  S       I N L+ +Y+KCG L +A K+
Sbjct: 117 PYASIYLTLLKFCLKQRALKEGKQVHAHIKTSG-SIGLYISNRLLDMYAKCGSLVDAEKV 175

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE--YCFSAVIRAC--- 190
           F  M + RD+ SW+ MIS YV  G    A ++F +M      PN   + ++A+I  C   
Sbjct: 176 FDEMVH-RDLCSWNIMISGYVKGGNFEKARNLFDKM------PNRDNFSWTAIISGCVQH 228

Query: 191 --------------------SNT-------------ENVAIGHIIYGFLLKCGYFDSDVC 217
                               SN               ++ +G  I+G +++ G  DSD  
Sbjct: 229 NRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKIHGHIMRMG-LDSDEV 287

Query: 218 VGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
           V C+L+DM+ K GS+  E A  +FDKM E++ V WT MI    + G   +   LF  ++ 
Sbjct: 288 VWCSLLDMYGKCGSI--EEARYIFDKMEERDVVSWTTMIHTYLKNGRREEGFALFRHLMN 345

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           S  +P+ FT +GV++AC++L     GKQ+H++ +R G         +LV MY+KC   G 
Sbjct: 346 SNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSAASALVHMYSKC---GD 402

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +++++ VF+ +   ++ SWT+++ GY Q G  DK A+  F  +++    P+   F  VL 
Sbjct: 403 IENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDK-ALHFFELLLKSGTKPDGIAFIGVLS 461

Query: 397 ACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESLFEK 452
           AC +  L+D  +    Y H++K    L   + +   +I + AR+G+  +A    ES+   
Sbjct: 462 ACAHAGLVDKGLE---YFHSIKEKHGLTRTIDHYACIIDLLARAGQFTEA----ESI--- 511

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
                                      I +  +    Y +A+LL G    G +    ++ 
Sbjct: 512 ---------------------------INEMPIKPDKYIWAALLGGCRIHGNL----ELA 540

Query: 513 ARIIKSGFE---SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
            R  KS FE    N   Y  L ++Y+          + + M+ R ++    M
Sbjct: 541 KRAAKSLFEIEPENPATYVTLANIYASAGMRAEEANIRETMDSRGIVKKPGM 592



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 217/449 (48%), Gaps = 63/449 (14%)

Query: 222 LIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           L+DM+ K GS  L  A KVFD+M  ++   W +MI+   + G    A  LF  M      
Sbjct: 159 LLDMYAKCGS--LVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKM------ 210

Query: 281 PDR--FTLSGVVSACSE-------LELFT-----------------------------SG 302
           P+R  F+ + ++S C +       LEL+                               G
Sbjct: 211 PNRDNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMG 270

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K++H   +R GL  D  V CSL+DMY KC   GS++++R +FD+M + +V+SWT +I  Y
Sbjct: 271 KKIHGHIMRMGLDSDEVVWCSLLDMYGKC---GSIEEARYIFDKMEERDVVSWTTMIHTY 327

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           +++G R+ E   LF  ++   + PN FTFA VL AC +L   ++ +Q++ + V+ G    
Sbjct: 328 LKNGRRE-EGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSF 386

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
               ++L+ MY++ G +E+A+  FE L + +L S+ +++  YA++   +KA      +  
Sbjct: 387 SSAASALVHMYSKCGDIENAKSVFEILPQPDLFSWTSLLVGYAQHGQHDKALHFFELLLK 446

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           +G       F  +LS  +  G + KG E  H+   K G       Y  +I + +R     
Sbjct: 447 SGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYACIIDLLARAGQFT 506

Query: 542 AAFQVFKEMEDR-NVISWTSMITGFAKHG---FAARALEIFYKMLADGIKP-NGITYIAV 596
            A  +  EM  + +   W +++ G   HG    A RA +  ++     I+P N  TY+ +
Sbjct: 507 EAESIINEMPIKPDKYIWAALLGGCRIHGNLELAKRAAKSLFE-----IEPENPATYVTL 561

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            +  + AG+ +E   + R   D  GIV++
Sbjct: 562 ANIYASAGMRAEE-ANIRETMDSRGIVKK 589



 Score =  125 bits (315), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 98/414 (23%), Positives = 183/414 (44%), Gaps = 74/414 (17%)

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
           R +EAV+L   + +    P    + ++LK C         +QV+ H +K   ++   + N
Sbjct: 103 RLREAVQLLYRIEK----PYASIYLTLLKFCLKQRALKEGKQVHAH-IKTSGSIGLYISN 157

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
            L+ MYA+ G + DA K F+ +  ++L S+N M+  Y K  N EKA  L  ++ +     
Sbjct: 158 RLLDMYAKCGSLVDAEKVFDEMVHRDLCSWNIMISGYVKGGNFEKARNLFDKMPN----R 213

Query: 488 SAYTFASLLSG------------------------------------ASSIGAIGKGEQI 511
             +++ +++SG                                    +++I ++  G++I
Sbjct: 214 DNFSWTAIISGCVQHNRPEEALELYRLMQKHDYSKSNKCTISSALAASAAIPSLHMGKKI 273

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H  I++ G +S+  ++ +L+ MY +C ++E A  +F +ME+R+V+SWT+MI  + K+G  
Sbjct: 274 HGHIMRMGLDSDEVVWCSLLDMYGKCGSIEEARYIFDKMEERDVVSWTTMIHTYLKNGRR 333

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACS-----------HAGLISEGWKHFRSMYDEH 620
                +F  ++   I PN  T+  VL+AC+           HA ++  G+  F S     
Sbjct: 334 EEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSFSSA---- 389

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
                    + +V +  + G +  A      +P   D+  W + L     HG  +   H 
Sbjct: 390 --------ASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHDKALHF 440

Query: 681 AEMILEQDPQ-DPAAHILLSNLYASAG----HWEYVANIRKRMKERNLIKEAGC 729
            E++L+   + D  A I + +  A AG      EY  +I+++      I    C
Sbjct: 441 FELLLKSGTKPDGIAFIGVLSACAHAGLVDKGLEYFHSIKEKHGLTRTIDHYAC 494



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/147 (27%), Positives = 75/147 (51%), Gaps = 1/147 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +GR ++       +      P+  T++ +L +C       LGK +H+ + R   +  
Sbjct: 327 YLKNGRREEGFALFRHLMNSNIMPNDFTFAGVLNACADLAAEDLGKQIHAYMVRVGFDSF 386

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S   ++L+ +YSKCGD+  A  +F+ +  + D+ SW+S++  Y   G+   A+H F  +L
Sbjct: 387 SSAASALVHMYSKCGDIENAKSVFEILP-QPDLFSWTSLLVGYAQHGQHDKALHFFELLL 445

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG 199
           + G  P+   F  V+ AC++   V  G
Sbjct: 446 KSGTKPDGIAFIGVLSACAHAGLVDKG 472


>gi|414869547|tpg|DAA48104.1| TPA: hypothetical protein ZEAMMB73_530850 [Zea mays]
          Length = 1091

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 255/775 (32%), Positives = 442/775 (57%), Gaps = 17/775 (2%)

Query: 96   LGKLVHSLLTRSKLE----------PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDI 145
            +GK VH    +S L            ++ + + L+ +Y KCGD+  A ++F +M +K ++
Sbjct: 323  IGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKCGDMASARRVFDAMSSKGNV 382

Query: 146  VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
              W+ ++  Y   G+  +++ +FV+M ELG  P+E+  S +++  +       G + +G+
Sbjct: 383  HVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARDGLVAHGY 442

Query: 206  LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
            ++K G F +   V  ALI  + K ++ +  A  VF++M  ++T+ W  +I+ C+  G   
Sbjct: 443  IVKLG-FGAQCAVCNALISFYAKSNM-IGDAVLVFNRMPRQDTISWNSVISGCSSNGLNS 500

Query: 266  DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
            +AI LF+ M   G   D  TL  V+ AC++   + +G+ +H ++++TGL  +  +  +L+
Sbjct: 501  EAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETSLANALL 560

Query: 326  DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
            DMY+ C+       + ++F  M   NV+SWTA+IT Y+++G  DK A  L  +M+   + 
Sbjct: 561  DMYSNCS---DWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVA-GLLQEMVLDGIR 616

Query: 386  PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            P+ F   S L A          + V+ + ++ G      V N+L+ MY +   +E+AR  
Sbjct: 617  PDVFAVTSALHAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNVEEARLI 676

Query: 446  FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
            F+ +  K+++S+NT++  Y++N    ++F L  ++       +A T   +L  A+SI ++
Sbjct: 677  FDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDML-LQFRPNAVTMTCILPAAASISSL 735

Query: 506  GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             +G +IHA  ++ GF  +    NAL+ MY +C  +  A  +F  +  +N+ISWT MI G+
Sbjct: 736  ERGREIHAYALRRGFLEDSYASNALVDMYVKCGALLVARVLFDRLTKKNLISWTIMIAGY 795

Query: 566  AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
              HGF   A+ +F +M   GI+P+  ++ A+L AC H+GL +EG + F++M  E+ I  +
Sbjct: 796  GMHGFGKHAIALFEQMRGSGIEPDAASFSAILYACCHSGLAAEGRRFFKAMQKEYKIEPK 855

Query: 626  MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
            ++HY C+VDLL R+G L EALEFI SMP+  D  +W + L  CR+H + +L +  A+ + 
Sbjct: 856  LKHYTCIVDLLSRTGDLKEALEFIESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVF 915

Query: 686  EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
            + +P++   ++LL+N+YA A  WE V  ++ ++  R L +  G SWIE  +KVH F    
Sbjct: 916  KLEPENTGYYVLLANIYAEAERWEAVKKLKNKIGGRGLRENTGYSWIEVRSKVHVFIADN 975

Query: 746  TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
             +HP    I   LD +A ++++ G+ P   + L   ++    + L  HS K+AVAFG+++
Sbjct: 976  RNHPDWNRIAEFLDDVARRMRQEGHDPKKKYALMGADDAVHDEALCGHSSKLAVAFGVLN 1035

Query: 806  TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
              + +PIRV KN +VC  CH A K+IS +  REI+LRDS+RFH  + G+CSC  Y
Sbjct: 1036 LPEGRPIRVTKNSKVCSHCHEAAKFISKMCNREIILRDSSRFHRFEGGRCSCRGY 1090



 Score =  238 bits (608), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 193/685 (28%), Positives = 326/685 (47%), Gaps = 46/685 (6%)

Query: 3   TLSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKA 62
            L+ PA   +  P++  PS+ S +N PPS +         S  ++ R+      G +  A
Sbjct: 36  VLAAPAGRVLEAPTA-APSSWSTKN-PPSRA--------LSSDVNLRIQRLCQAGDLAGA 85

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN----SVILNS 118
              L L+   G   D+ +Y ++++ C   R+    K  H+L+  S         SV+   
Sbjct: 86  ---LRLLGSDGG-VDVRSYCMVVQLCGEERSLEAAKRAHALIRASSAAATGGKGSVLGKR 141

Query: 119 LISLYSKCGDLNEANKIFKSMGNKR-DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           L+  Y KCGDL EA  +F  M  +  D+  W+S++S+Y   G   +A+ +F +M   G  
Sbjct: 142 LVLAYLKCGDLGEARTVFDGMPPQAADVRVWTSLMSAYAKAGDFQEAVSLFRQMQCCGVS 201

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+ +  S V++  S+  ++  G +I+G L K G       V  ALI ++ +    +E A 
Sbjct: 202 PDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLG-LGQACAVANALIAVYSRCG-RMEDAA 259

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +VFD M  ++ + W  MI  C   G    A+ LF  M   G      T+  V+ AC+ L 
Sbjct: 260 RVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQGTEISSVTVLSVLPACAGLG 319

Query: 298 LFTSGKQLHSWAIRTGLAL----------DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
               GK +H +++++GL            D  +G  LV MY KC   G +  +R+VFD M
Sbjct: 320 YGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMYVKC---GDMASARRVFDAM 376

Query: 348 LDH-NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
               NV  W  I+ GY +  G  +E++ LF  M +  +AP+    + +LK    L  +  
Sbjct: 377 SSKGNVHVWNLIMGGYAKV-GEFEESLSLFVQMHELGIAPDEHAISCLLKCITCLSCARD 435

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
               + + VK G      V N+LIS YA+S  + DA   F  +  ++ +S+N+++   + 
Sbjct: 436 GLVAHGYIVKLGFGAQCAVCNALISFYAKSNMIGDAVLVFNRMPRQDTISWNSVISGCSS 495

Query: 467 N-LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           N LNSE A EL   +   G    + T  S+L   +       G  +H   +K+G      
Sbjct: 496 NGLNSE-AIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETS 554

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + NAL+ MYS C++ ++  Q+F+ M  +NV+SWT+MIT + + G   +   +  +M+ DG
Sbjct: 555 LANALLDMYSNCSDWQSTNQIFRSMGQKNVVSWTAMITSYMRAGLFDKVAGLLQEMVLDG 614

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYD---EHGIVQRMEHYACMVDLLGRSGSL 642
           I+P+     AV SA  HA    E  K  +S++     +G+ + +     ++++  +  ++
Sbjct: 615 IRPD---VFAVTSAL-HAFAGDESLKQGKSVHGYTIRNGMEKLLPVANALMEMYVKCRNV 670

Query: 643 TEALEFIRSMPLSADVLVWRTFLGA 667
            EA   I     + DV+ W T +G 
Sbjct: 671 EEA-RLIFDRVTNKDVISWNTLIGG 694



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/506 (26%), Positives = 246/506 (48%), Gaps = 52/506 (10%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G   +AI     M  +G   D  T   +L +C +SR +  G++VH    ++ L   + 
Sbjct: 495 SNGLNSEAIELFIRMWTQGQELDSVTLLSVLPACAQSRYWFAGRVVHGYSVKTGLIGETS 554

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+ +YS C D    N+IF+SMG K ++VSW++MI+SY+  G       +  EM+  
Sbjct: 555 LANALLDMYSNCSDWQSTNQIFRSMGQK-NVVSWTAMITSYMRAGLFDKVAGLLQEMVLD 613

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+ +  ++ + A +  E++  G  ++G+ ++ G  +  + V  AL++M+VK   ++E
Sbjct: 614 GIRPDVFAVTSALHAFAGDESLKQGKSVHGYTIRNG-MEKLLPVANALMEMYVK-CRNVE 671

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +FD++T K+ + W  +I   ++   P ++  LF DM+L  F P+  T++ ++ A +
Sbjct: 672 EARLIFDRVTNKDVISWNTLIGGYSRNNFPNESFSLFSDMLLQ-FRPNAVTMTCILPAAA 730

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            +     G+++H++A+R G   D     +LVDMY KC   G++  +R +FDR+   N++S
Sbjct: 731 SISSLERGREIHAYALRRGFLEDSYASNALVDMYVKC---GALLVARVLFDRLTKKNLIS 787

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WT +I GY    G  K A+ LF  M    + P+  +F+++L AC                
Sbjct: 788 WTIMIAGYGMH-GFGKHAIALFEQMRGSGIEPDAASFSAILYAC---------------- 830

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLN 469
                                SG   + R+ F+++      E  L  Y  +VD  ++  +
Sbjct: 831 -------------------CHSGLAAEGRRFFKAMQKEYKIEPKLKHYTCIVDLLSRTGD 871

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            ++A E    IE   +   +  + SLL G      +   E++  ++ K   E N   Y  
Sbjct: 872 LKEALEF---IESMPIEPDSSIWVSLLHGCRIHKNVKLAEKVADKVFKLEPE-NTGYYVL 927

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNV 555
           L ++Y+     EA  ++  ++  R +
Sbjct: 928 LANIYAEAERWEAVKKLKNKIGGRGL 953



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 214/479 (44%), Gaps = 44/479 (9%)

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH----- 306
            L I R  Q G    A+RL    + S    D  +   VV  C E     + K+ H     
Sbjct: 70  NLRIQRLCQAGDLAGALRL----LGSDGGVDVRSYCMVVQLCGEERSLEAAKRAHALIRA 125

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH--NVMSWTAIITGYVQ 364
           S A  TG    V +G  LV  Y KC   G + ++R VFD M     +V  WT++++ Y +
Sbjct: 126 SSAAATGGKGSV-LGKRLVLAYLKC---GDLGEARTVFDGMPPQAADVRVWTSLMSAYAK 181

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G   +EAV LF  M    V+P+    + VLK   +L      E ++    K G      
Sbjct: 182 AGDF-QEAVSLFRQMQCCGVSPDAHAVSCVLKCVSSLGSLTEGEVIHGLLEKLGLGQACA 240

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V N+LI++Y+R GRMEDA + F+S+  ++ +S+N+M+     N     A +L  ++   G
Sbjct: 241 VANALIAVYSRCGRMEDAARVFDSMHPRDAISWNSMIGGCFSNGWHGTAVDLFSKMWSQG 300

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE----------SNHCIYNALISMY 534
              S+ T  S+L   + +G    G+ +H   +KSG             +  + + L+ MY
Sbjct: 301 TEISSVTVLSVLPACAGLGYGLIGKAVHGYSVKSGLLWGLDSVQSGIDDAALGSKLVFMY 360

Query: 535 SRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
            +C ++ +A +VF  M  + NV  W  ++ G+AK G    +L +F +M   GI P+    
Sbjct: 361 VKCGDMASARRVFDAMSSKGNVHVWNLIMGGYAKVGEFEESLSLFVQMHELGIAPDEHAI 420

Query: 594 IAVLS-----ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
             +L      +C+  GL++ G+        + G   +      ++    +S  + +A+  
Sbjct: 421 SCLLKCITCLSCARDGLVAHGY------IVKLGFGAQCAVCNALISFYAKSNMIGDAVLV 474

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ--DPQDPAAHILLSNLYASA 705
              MP   D + W + +  C  +G   L   A E+ +      Q+  +  LLS L A A
Sbjct: 475 FNRMP-RQDTISWNSVISGCSSNG---LNSEAIELFIRMWTQGQELDSVTLLSVLPACA 529


>gi|297598430|ref|NP_001045574.2| Os01g0977400 [Oryza sativa Japonica Group]
 gi|255674132|dbj|BAF07488.2| Os01g0977400, partial [Oryza sativa Japonica Group]
          Length = 687

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 276/692 (39%), Positives = 400/692 (57%), Gaps = 19/692 (2%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML     PN Y F   ++ACS   +   G  I+   +  G   +D+ V  AL+DM+VK +
Sbjct: 1   MLRHRVAPNNYTFPFALKACSALADHHCGRAIHRHAIHAG-LQADLFVSTALLDMYVKCA 59

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR--LFLDMILSGFLPDRFTLSG 288
             L  A  +F  M  ++ V W  M+      G    A+   L + M +    P+  TL  
Sbjct: 60  C-LPDAAHIFATMPARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVA 118

Query: 289 VVSACSELELFTSGKQLHSWAIR----------TGLALDVCVGCSLVDMYAKCTVDGSVD 338
           ++   ++      G  +H++ IR          + L   V +G +L+DMYAKC   GS+ 
Sbjct: 119 LLPLLAQQGALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKC---GSLL 175

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKA 397
            +R+VFD M   N ++W+A+I G+V    R  +A  LF  M+ QG    +  + AS L+A
Sbjct: 176 YARRVFDAMPARNEVTWSALIGGFVLCS-RMTQAFLLFKAMLAQGLCFLSPTSIASALRA 234

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L    + EQ++    K G   D   GNSL+SMYA++G ++ A   F+ +  K+ VSY
Sbjct: 235 CASLDHLRMGEQLHALLAKSGVHADLTAGNSLLSMYAKAGLIDQAIALFDEMAVKDTVSY 294

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           + +V  Y +N  +E+AF +  +++   V   A T  SL+   S + A+  G   H  +I 
Sbjct: 295 SALVSGYVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVII 354

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
            G  S   I NALI MY++C  ++ + QVF  M  R+++SW +MI G+  HG    A  +
Sbjct: 355 RGLASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATAL 414

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M   G  P+G+T+I +LSACSH+GL+ EG   F  M   +G+  RMEHY CMVDLL 
Sbjct: 415 FLEMNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLS 474

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R G L EA EFI+SMPL ADV VW   LGACRV+ + +LGK  + MI E  P+     +L
Sbjct: 475 RGGFLDEAYEFIQSMPLRADVRVWVALLGACRVYKNIDLGKKVSRMIQELGPEGTGNFVL 534

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN+Y++AG ++  A +R   K +   K  GCSWIE +  +H F  G+ SHP++ EIY E
Sbjct: 535 LSNIYSAAGRFDEAAEVRIIQKVQGFKKSPGCSWIEINGSLHAFVGGDQSHPQSPEIYRE 594

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           LD + + IK+ GY PDT+FVL +LEEE+K + L  HSEK+A+A+G++S S+ K I V KN
Sbjct: 595 LDNILVGIKKLGYQPDTSFVLQDLEEEEKEKALICHSEKLAIAYGILSLSEDKTIFVTKN 654

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHH 849
           LRVCGDCHT IK+IS+V  R I++RD+NRFHH
Sbjct: 655 LRVCGDCHTVIKHISLVKRRAIIVRDANRFHH 686



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 251/505 (49%), Gaps = 28/505 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+   LK+C    + H G+ +H     + L+ +  +  +L+ +Y KC  L +A  I
Sbjct: 8   PNNYTFPFALKACSALADHHCGRAIHRHAIHAGLQADLFVSTALLDMYVKCACLPDAAHI 67

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAI-HMFVEMLELG-FCPNEYCFSAVIRACSNT 193
           F +M   RD+V+W++M++ Y + G    A+ H+    +++    PN     A++   +  
Sbjct: 68  FATM-PARDLVAWNAMLAGYAHHGMYHHAVAHLLSMQMQMHRLRPNASTLVALLPLLAQQ 126

Query: 194 ENVAIGHIIYGFLLKC---------GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
             +A G  ++ + ++                V +G AL+DM+ K    L  A +VFD M 
Sbjct: 127 GALAQGTSVHAYCIRACLHPNRNSKSKLTDGVLLGTALLDMYAKCG-SLLYARRVFDAMP 185

Query: 245 EKNTVGWTLMI---TRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELF 299
            +N V W+ +I     C+++     A  LF  M+  G  FL    +++  + AC+ L+  
Sbjct: 186 ARNEVTWSALIGGFVLCSRM---TQAFLLFKAMLAQGLCFLSPT-SIASALRACASLDHL 241

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+QLH+   ++G+  D+  G SL+ MYAK    G +D +  +FD M   + +S++A++
Sbjct: 242 RMGEQLHALLAKSGVHADLTAGNSLLSMYAKA---GLIDQAIALFDEMAVKDTVSYSALV 298

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +GYVQ+ GR +EA  +F  M    V P+  T  S++ AC +L         +   + RG 
Sbjct: 299 SGYVQN-GRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGL 357

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           A +  + N+LI MYA+ GR++ +R+ F  +  +++VS+NTM+  Y  +   ++A  L  E
Sbjct: 358 ASETSICNALIDMYAKCGRIDLSRQVFNMMPSRDIVSWNTMIAGYGIHGLGKEATALFLE 417

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCA 538
           + + G      TF  LLS  S  G + +G+   H      G       Y  ++ + SR  
Sbjct: 418 MNNLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHYICMVDLLSRGG 477

Query: 539 NVEAAFQVFKEMEDR-NVISWTSMI 562
            ++ A++  + M  R +V  W +++
Sbjct: 478 FLDEAYEFIQSMPLRADVRVWVALL 502



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR ++A      M      PD  T   L+ +C        G+  H  +    L   
Sbjct: 301 YVQNGRAEEAFLVFKKMQACNVEPDAATMVSLIPACSHLAALQHGRCSHGSVIIRGLASE 360

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I N+LI +Y+KCG ++ + ++F  M + RDIVSW++MI+ Y   G   +A  +F+EM 
Sbjct: 361 TSICNALIDMYAKCGRIDLSRQVFNMMPS-RDIVSWNTMIAGYGIHGLGKEATALFLEMN 419

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG----HII---YGFLLKCGYFDSDVCVGCALIDM 225
            LGF P+   F  ++ ACS++  V  G    H++   YG   +  ++   +C    ++D+
Sbjct: 420 NLGFPPDGVTFICLLSACSHSGLVIEGKHWFHVMGHGYGLTPRMEHY---IC----MVDL 472

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
             +G   L+ AY+    M  +  V  W  ++  C
Sbjct: 473 LSRGGF-LDEAYEFIQSMPLRADVRVWVALLGAC 505


>gi|224140549|ref|XP_002323645.1| predicted protein [Populus trichocarpa]
 gi|222868275|gb|EEF05406.1| predicted protein [Populus trichocarpa]
          Length = 682

 Score =  491 bits (1263), Expect = e-136,   Method: Compositional matrix adjust.
 Identities = 247/626 (39%), Positives = 376/626 (60%), Gaps = 4/626 (0%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           ++++ D+  E N   +  MI       C +++I ++  M   G  PD FT   V+ AC+ 
Sbjct: 61  SFRILDQTKEPNIFLFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACAR 120

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           +     G ++HS  ++ G   D  V  SL+++Y KC   G +D++ KVFD + D N  SW
Sbjct: 121 VLDSELGVKMHSLVVKAGCEADAFVKISLINLYTKC---GFIDNAFKVFDDIPDKNFASW 177

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           TA I+GYV  G + +EA+ +F  +++  + P+ F+   VL AC    D    E +  +  
Sbjct: 178 TATISGYVGVG-KCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYIT 236

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + G   +  V  +L+  Y + G ME AR  F+ + EKN+VS+++M+  YA N   ++A +
Sbjct: 237 ENGMVRNVFVATALVDFYGKCGNMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALD 296

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  ++ + G+    Y    +L   + +GA+  G+     I  + F  N  +  ALI MY+
Sbjct: 297 LFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSVLGTALIDMYA 356

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  ++ A++VF+ M  ++ + W + I+G A  G    AL +F +M   GIKP+  T++ 
Sbjct: 357 KCGRMDRAWEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVG 416

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L AC+HAGL+ EG ++F SM     +   +EHY CMVDLLGR+G L EA + I+SMP+ 
Sbjct: 417 LLCACTHAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPME 476

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           A+ +VW   LG CR+H DT+L +   + ++  +P     ++LLSN+YA++  WE  A IR
Sbjct: 477 ANAIVWGALLGGCRLHRDTQLVEVVLKKLIALEPWHSGNYVLLSNIYAASHKWEEAAKIR 536

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             M ER + K  G SWIE D  VH+F VG+TSHP + +IYA+L +LA  +K  GY+P T+
Sbjct: 537 SIMSERGVKKIPGYSWIEVDGVVHQFLVGDTSHPLSEKIYAKLGELAKDLKAAGYVPTTD 596

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
            VL ++EEE+K  ++  HSEK+AVAFGLIST+ +  I V KNLRVCGDCH AIK+IS + 
Sbjct: 597 HVLFDIEEEEKEHFIGCHSEKLAVAFGLISTAPNDKILVVKNLRVCGDCHEAIKHISRIA 656

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
           GREI++RD+NRFH   DG CSC DYW
Sbjct: 657 GREIIVRDNNRFHCFTDGLCSCKDYW 682



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 148/547 (27%), Positives = 269/547 (49%), Gaps = 34/547 (6%)

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           SC++    HL K +H+ L R  L+ ++ +LN ++      G+ N + +I      + +I 
Sbjct: 21  SCLK----HL-KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQT-KEPNIF 74

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
            +++MI   V      ++I ++  M + G  P+ + F  V++AC+   +  +G  ++  +
Sbjct: 75  LFNTMIRGLVLNDCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLV 134

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           +K G  ++D  V  +LI+++ K    +++A+KVFD + +KN   WT  I+    +G  R+
Sbjct: 135 VKAGC-EADAFVKISLINLYTKCGF-IDNAFKVFDDIPDKNFASWTATISGYVGVGKCRE 192

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           AI +F  ++  G  PD F+L  V+SAC       SG+ +  +    G+  +V V  +LVD
Sbjct: 193 AIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVATALVD 252

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
            Y KC   G+++ +R VFD ML+ N++SW+++I GY  S G  KEA+ LF  M+   + P
Sbjct: 253 FYGKC---GNMERARSVFDGMLEKNIVSWSSMIQGYA-SNGLPKEALDLFFKMLNEGLKP 308

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKA 445
           + +    VL +C  L    + +   ++ +     LD+ V G +LI MYA+ GRM+ A + 
Sbjct: 309 DCYAMVGVLCSCARLGALELGDWA-SNLINGNEFLDNSVLGTALIDMYAKCGRMDRAWEV 367

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  + +K+ V +N  +   A + + + A  L  ++E +G+     TF  LL   +  G +
Sbjct: 368 FRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHAGLV 427

Query: 506 GKGEQIHARIIKSGFESNHCI---------YNALISMYSRCANVEAAFQVFKEME-DRNV 555
            +G +         F S  C+         Y  ++ +  R   ++ A Q+ K M  + N 
Sbjct: 428 EEGRRY--------FNSMECVFTLTPEIEHYGCMVDLLGRAGCLDEAHQLIKSMPMEANA 479

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           I W +++ G   H        +  K++A  ++P       +LS    A    E     RS
Sbjct: 480 IVWGALLGGCRLHRDTQLVEVVLKKLIA--LEPWHSGNYVLLSNIYAASHKWEEAAKIRS 537

Query: 616 MYDEHGI 622
           +  E G+
Sbjct: 538 IMSERGV 544



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 144/444 (32%), Positives = 227/444 (51%), Gaps = 49/444 (11%)

Query: 42  TSEP---LSNRLIYHL--NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           T EP   L N +I  L  ND   Q++I     M ++G  PD  T+  +LK+C R  +  L
Sbjct: 68  TKEPNIFLFNTMIRGLVLNDC-FQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSEL 126

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G  +HSL+ ++  E ++ +  SLI+LY+KCG ++ A K+F  + +K +  SW++ IS YV
Sbjct: 127 GVKMHSLVVKAGCEADAFVKISLINLYTKCGFIDNAFKVFDDIPDK-NFASWTATISGYV 185

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             GK  +AI MF  +LE+G  P+ +    V+ AC  T ++  G  I  ++ + G    +V
Sbjct: 186 GVGKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMV-RNV 244

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  AL+D + K   ++E A  VFD M EKN V W+ MI      G P++A+ LF  M+ 
Sbjct: 245 FVATALVDFYGKCG-NMERARSVFDGMLEKNIVSWSSMIQGYASNGLPKEALDLFFKMLN 303

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWA---IRTGLALDVCV-GCSLVDMYAKCT 332
            G  PD + + GV+ +C+ L       +L  WA   I     LD  V G +L+DMYAKC 
Sbjct: 304 EGLKPDCYAMVGVLCSCARL----GALELGDWASNLINGNEFLDNSVLGTALIDMYAKC- 358

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G +D + +VF  M   + + W A I+G   S G  K+A+ LF  M +  + P+  TF 
Sbjct: 359 --GRMDRAWEVFRGMRKKDRVVWNAAISGLAMS-GHVKDALGLFGQMEKSGIKPDRNTFV 415

Query: 393 SVLKACGNLLDSNVAEQVYTHA--VKRGRAL---DDCVGN---------SLISMYARSGR 438
            +L AC             THA  V+ GR      +CV            ++ +  R+G 
Sbjct: 416 GLLCAC-------------THAGLVEEGRRYFNSMECVFTLTPEIEHYGCMVDLLGRAGC 462

Query: 439 MEDARKAFESL-FEKNLVSYNTMV 461
           +++A +  +S+  E N + +  ++
Sbjct: 463 LDEAHQLIKSMPMEANAIVWGALL 486



 Score =  129 bits (324), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 156/308 (50%), Gaps = 10/308 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++AI     + + G  PD  +   +L +C R+ +   G+ +   +T + +  N  + 
Sbjct: 188 GKCREAIDMFRRLLEMGLRPDSFSLVEVLSACKRTGDLRSGEWIDEYITENGMVRNVFVA 247

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+  Y KCG++  A  +F  M  K +IVSWSSMI  Y + G   +A+ +F +ML  G 
Sbjct: 248 TALVDFYGKCGNMERARSVFDGMLEK-NIVSWSSMIQGYASNGLPKEALDLFFKMLNEGL 306

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ Y    V+ +C+    + +G      +    + D+ V +G ALIDM+ K    ++ A
Sbjct: 307 KPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDNSV-LGTALIDMYAKCG-RMDRA 364

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           ++VF  M +K+ V W   I+     G  +DA+ LF  M  SG  PDR T  G++ AC+  
Sbjct: 365 WEVFRGMRKKDRVVWNAAISGLAMSGHVKDALGLFGQMEKSGIKPDRNTFVGLLCACTHA 424

Query: 297 ELFTSGKQ-LHSWAIRTGLALDV-CVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVM 353
            L   G++  +S      L  ++   GC +VD+  +    G +D++ ++   M ++ N +
Sbjct: 425 GLVEEGRRYFNSMECVFTLTPEIEHYGC-MVDLLGRA---GCLDEAHQLIKSMPMEANAI 480

Query: 354 SWTAIITG 361
            W A++ G
Sbjct: 481 VWGALLGG 488



 Score =  112 bits (280), Expect = 8e-22,   Method: Compositional matrix adjust.
 Identities = 60/258 (23%), Positives = 133/258 (51%), Gaps = 2/258 (0%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           + ++   ++ G   D  + N ++      G    + +  +   E N+  +NTM+     N
Sbjct: 27  KHIHAALLRLGLDEDTYLLNKVLRFSFNFGNTNYSFRILDQTKEPNIFLFNTMIRGLVLN 86

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              +++ E+ H +   G+   ++TF  +L   + +     G ++H+ ++K+G E++  + 
Sbjct: 87  DCFQESIEIYHSMRKEGLSPDSFTFPFVLKACARVLDSELGVKMHSLVVKAGCEADAFVK 146

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
            +LI++Y++C  ++ AF+VF ++ D+N  SWT+ I+G+   G    A+++F ++L  G++
Sbjct: 147 ISLINLYTKCGFIDNAFKVFDDIPDKNFASWTATISGYVGVGKCREAIDMFRRLLEMGLR 206

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+  + + VLSAC   G +  G +       E+G+V+ +     +VD  G+ G++  A  
Sbjct: 207 PDSFSLVEVLSACKRTGDLRSG-EWIDEYITENGMVRNVFVATALVDFYGKCGNMERARS 265

Query: 648 FIRSMPLSADVLVWRTFL 665
               M L  +++ W + +
Sbjct: 266 VFDGM-LEKNIVSWSSMI 282



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 103/217 (47%), Gaps = 23/217 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + ++G  ++A+     M  +G  PD      +L SC R     LG    +L+  ++   N
Sbjct: 285 YASNGLPKEALDLFFKMLNEGLKPDCYAMVGVLCSCARLGALELGDWASNLINGNEFLDN 344

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           SV+  +LI +Y+KCG ++ A ++F+ M  K+D V W++ IS     G   DA+ +F +M 
Sbjct: 345 SVLGTALIDMYAKCGRMDRAWEVFRGM-RKKDRVVWNAAISGLAMSGHVKDALGLFGQME 403

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV----------GCAL 222
           + G  P+   F  ++ AC++   V  G           YF+S  CV          GC +
Sbjct: 404 KSGIKPDRNTFVGLLCACTHAGLVEEGR---------RYFNSMECVFTLTPEIEHYGC-M 453

Query: 223 IDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           +D+  +    L+ A+++   M  E N + W  ++  C
Sbjct: 454 VDLLGRAGC-LDEAHQLIKSMPMEANAIVWGALLGGC 489


>gi|356528519|ref|XP_003532850.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Glycine max]
          Length = 849

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 262/755 (34%), Positives = 447/755 (59%), Gaps = 14/755 (1%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTY 81
           S+ NL   +   F   P  +    + ++  Y  +   V+  +     M      P+    
Sbjct: 98  SKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYIL 157

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           + ++++C +  N      +H  + +     +  +  SLI  Y+K G ++EA  IF  +  
Sbjct: 158 ASVVRACTQLGNLSQALQLHGFVVKGGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKV 217

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           K   V+W+++I+ Y   G+   ++ +F +M E    P+ Y  S+V+ ACS  E +  G  
Sbjct: 218 KT-TVTWTAIIAGYAKLGRSEVSLKLFNQMREGDVYPDRYVISSVLSACSMLEFLEGGKQ 276

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+G++L+ G FD DV V   +ID ++K    +++  K+F+++ +K+ V WT MI  C Q 
Sbjct: 277 IHGYVLRRG-FDMDVSVVNGIIDFYLKCH-KVKTGRKLFNRLVDKDVVSWTTMIAGCMQN 334

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
               DA+ LF++M+  G+ PD F  + V+++C  L+    G+Q+H++AI+  +  D  V 
Sbjct: 335 SFHGDAMDLFVEMVRKGWKPDAFGCTSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVK 394

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK--EAVKLFSDM 379
             L+DMYAKC    S+ ++RKVFD +   NV+S+ A+I GY +   +DK  EA+ LF +M
Sbjct: 395 NGLIDMYAKCD---SLTNARKVFDLVAAINVVSYNAMIEGYSR---QDKLVEALDLFREM 448

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
                 P   TF S+L    +L    ++ Q++   +K G +LD   G++LI +Y++   +
Sbjct: 449 RLSLSPPTLLTFVSLLGLSSSLFLLELSSQIHCLIIKFGVSLDSFAGSALIDVYSKCSCV 508

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
            DAR  FE ++++++V +N M   Y++ L +E++ +L  +++ + +  + +TFA++++ A
Sbjct: 509 GDARLVFEEIYDRDIVVWNAMFSGYSQQLENEESLKLYKDLQMSRLKPNEFTFAAVIAAA 568

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           S+I ++  G+Q H ++IK G + +  + N+L+ MY++C ++E + + F     R++  W 
Sbjct: 569 SNIASLRHGQQFHNQVIKMGLDDDPFVTNSLVDMYAKCGSIEESHKAFSSTNQRDIACWN 628

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           SMI+ +A+HG AA+ALE+F +M+ +G+KPN +T++ +LSACSHAGL+  G+ HF SM  +
Sbjct: 629 SMISTYAQHGDAAKALEVFERMIMEGVKPNYVTFVGLLSACSHAGLLDLGFHHFESM-SK 687

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            GI   ++HYACMV LLGR+G + EA EF++ MP+    +VWR+ L ACRV G  ELG +
Sbjct: 688 FGIEPGIDHYACMVSLLGRAGKIYEAKEFVKKMPIKPAAVVWRSLLSACRVSGHVELGTY 747

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AAEM +  DP D  ++ILLSN++AS G W  V  +R++M    ++KE G SWIE +N+VH
Sbjct: 748 AAEMAISCDPADSGSYILLSNIFASKGMWASVRMVREKMDMSRVVKEPGWSWIEVNNEVH 807

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           +F   +T+H  +  I   LD L L+IK FGY+P+ 
Sbjct: 808 RFIARDTAHRDSTLISLVLDNLILQIKGFGYVPNA 842



 Score =  304 bits (779), Expect = 1e-79,   Method: Compositional matrix adjust.
 Identities = 199/596 (33%), Positives = 323/596 (54%), Gaps = 14/596 (2%)

Query: 95  HLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           H  K +H+ +       + V L N+L+  YSK    ++A K+F +M + R++V+WSSM+S
Sbjct: 68  HYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPH-RNLVTWSSMVS 126

Query: 154 SYVNRGKQVDAIHMFVE-MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
            Y   G  V+A+ +F   M      PNEY  ++V+RAC+   N++    ++GF++K G F
Sbjct: 127 MYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVKGG-F 185

Query: 213 DSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
             DV VG +LID + K G VD   A  +FD +  K TV WT +I    +LG    +++LF
Sbjct: 186 VQDVYVGTSLIDFYAKRGYVD--EARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKLF 243

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
             M      PDR+ +S V+SACS LE    GKQ+H + +R G  +DV V   ++D Y KC
Sbjct: 244 NQMREGDVYPDRYVISSVLSACSMLEFLEGGKQIHGYVLRRGFDMDVSVVNGIIDFYLKC 303

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
                V   RK+F+R++D +V+SWT +I G +Q+     +A+ LF +M++    P+ F  
Sbjct: 304 H---KVKTGRKLFNRLVDKDVVSWTTMIAGCMQNSFHG-DAMDLFVEMVRKGWKPDAFGC 359

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            SVL +CG+L       QV+ +A+K     DD V N LI MYA+   + +ARK F+ +  
Sbjct: 360 TSVLNSCGSLQALQKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTNARKVFDLVAA 419

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            N+VSYN M++ Y++     +A +L  E+  +    +  TF SLL  +SS+  +    QI
Sbjct: 420 INVVSYNAMIEGYSRQDKLVEALDLFREMRLSLSPPTLLTFVSLLGLSSSLFLLELSSQI 479

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H  IIK G   +    +ALI +YS+C+ V  A  VF+E+ DR+++ W +M +G+++    
Sbjct: 480 HCLIIKFGVSLDSFAGSALIDVYSKCSCVGDARLVFEEIYDRDIVVWNAMFSGYSQQLEN 539

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             +L+++  +    +KPN  T+ AV++A S+   +  G + F +   + G+         
Sbjct: 540 EESLKLYKDLQMSRLKPNEFTFAAVIAAASNIASLRHG-QQFHNQVIKMGLDDDPFVTNS 598

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE-MILE 686
           +VD+  + GS+ E+ +   S     D+  W + +     HGD        E MI+E
Sbjct: 599 LVDMYAKCGSIEESHKAFSSTN-QRDIACWNSMISTYAQHGDAAKALEVFERMIME 653



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 68/280 (24%), Positives = 136/280 (48%), Gaps = 7/280 (2%)

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
           N+L S+  ++++ H V  G    D  + N+L+  Y++     DA+K F+++  +NLV+++
Sbjct: 63  NILTSHYYKKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWS 122

Query: 459 TMVDAYAKNLNSEKAFELL-HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           +MV  Y ++  S +A  L    +       + Y  AS++   + +G + +  Q+H  ++K
Sbjct: 123 SMVSMYTQHGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQLHGFVVK 182

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
            GF  +  +  +LI  Y++   V+ A  +F  ++ +  ++WT++I G+AK G +  +L++
Sbjct: 183 GGFVQDVYVGTSLIDFYAKRGYVDEARLIFDGLKVKTTVTWTAIIAGYAKLGRSEVSLKL 242

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M    + P+     +VLSACS    + EG K         G    +     ++D   
Sbjct: 243 FNQMREGDVYPDRYVISSVLSACSMLEFL-EGGKQIHGYVLRRGFDMDVSVVNGIIDFYL 301

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGAC---RVHGDT 674
           +   +    +    + +  DV+ W T +  C     HGD 
Sbjct: 302 KCHKVKTGRKLFNRL-VDKDVVSWTTMIAGCMQNSFHGDA 340



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 91/197 (46%), Gaps = 5/197 (2%)

Query: 509 EQIHARIIKSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           ++IHA I+  GF  +   + N L+  YS+      A ++F  M  RN+++W+SM++ + +
Sbjct: 71  KKIHAHIVVLGFHQHDVFLVNTLLHAYSKMNLQSDAQKLFDTMPHRNLVTWSSMVSMYTQ 130

Query: 568 HGFAARALEIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           HG++  AL +F + +     KPN     +V+ AC+  G +S+  +       + G VQ +
Sbjct: 131 HGYSVEALLLFCRFMRSCSEKPNEYILASVVRACTQLGNLSQALQ-LHGFVVKGGFVQDV 189

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
                ++D   + G + EA      + +   V  W   +      G +E+       + E
Sbjct: 190 YVGTSLIDFYAKRGYVDEARLIFDGLKVKTTV-TWTAIIAGYAKLGRSEVSLKLFNQMRE 248

Query: 687 QDPQDPAAHILLSNLYA 703
            D   P  +++ S L A
Sbjct: 249 GDVY-PDRYVISSVLSA 264


>gi|359488315|ref|XP_002278668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Vitis vinifera]
          Length = 877

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 442/748 (59%), Gaps = 8/748 (1%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F A P       N LI  +L++G  +K I     M + G   D  T++++LKSC    + 
Sbjct: 131 FDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDH 190

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G  +H L  +   + + V  ++L+ +Y+KC  L+ + + F SM  K + VSWS++I+ 
Sbjct: 191 GGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK-NWVSWSAIIAG 249

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            V        + +F EM + G   ++  F++V R+C+    + +G  ++G  LK   F +
Sbjct: 250 CVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTD-FGT 308

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV +G A +DM++K + +L  A K+F+ +   N   +  +I    +     +A+ +F  +
Sbjct: 309 DVVIGTATLDMYMKCN-NLSDAQKLFNSLPNHNLQSYNAIIVGYARSDKGIEALGMFRLL 367

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             SG   D  +LSG   AC+ ++    G Q+H  ++++    ++CV  +++DMY KC   
Sbjct: 368 QKSGLGLDEVSLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKC--- 424

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G++ ++  VF+ M+  + +SW AII  + Q+G  +K  + LF  M+Q  + P+ FT+ SV
Sbjct: 425 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK-TLSLFVWMLQSGMEPDEFTYGSV 483

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           LKAC      N   +++   +K    LD  VG +LI MY++ G ME A K  + L E+ +
Sbjct: 484 LKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV 543

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           VS+N ++  ++    SE+A +   ++ + GV    +T+A++L   +++  +  G+QIHA+
Sbjct: 544 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 603

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           IIK   +S+  I + L+ MYS+C N++    +F++  +R+ ++W +M+ G+A+HG    A
Sbjct: 604 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 663

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L+IF  M  + +KPN  T++AVL AC H GL+ +G  +F SM   +G+  ++EHY+C+VD
Sbjct: 664 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVD 723

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           ++GRSG +++ALE I  MP  AD ++WRT L  C++HG+ E+ + AA  IL+ +P+D AA
Sbjct: 724 IMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAA 783

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           ++LLSN+YA+AG W  V  +RK M+   L KE GCSWIE  ++VH F VG+ +HP++ EI
Sbjct: 784 YVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEI 843

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELE 782
           Y  LD L  ++K  GY+PDT+F+L++ E
Sbjct: 844 YENLDVLTDEMKWVGYMPDTDFILNDDE 871



 Score =  284 bits (727), Expect = 1e-73,   Method: Compositional matrix adjust.
 Identities = 177/635 (27%), Positives = 315/635 (49%), Gaps = 41/635 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S + + C   +    GK  H+ +  ++ +P   + N LI +Y KC DL  A K+F  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 140 GNK------------------------------RDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +                              RD+VSW+S+IS Y++ G     I +F+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M  +G   +   F+ V+++CS+ E+   G  I+G  +K G FD DV  G AL+DM+ K 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG-FDCDVVTGSALLDMYAKC 222

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              L+ + + F  M EKN V W+ +I  C Q    R  + LF +M  +G    + T + V
Sbjct: 223 K-KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
             +C+ L     G QLH  A++T    DV +G + +DMY KC    ++ D++K+F+ + +
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCN---NLSDAQKLFNSLPN 338

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           HN+ S+ AII GY +S  +  EA+ +F  + +  +  +  + +   +AC  +       Q
Sbjct: 339 HNLQSYNAIIVGYARS-DKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQ 397

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+  ++K     + CV N+++ MY + G + +A   FE +  ++ VS+N ++ A+ +N N
Sbjct: 398 VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGN 457

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            EK   L   +  +G+    +T+ S+L   +   A+  G +IH RIIKS    +  +  A
Sbjct: 458 EEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIA 517

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MYS+C  +E A ++   + ++ V+SW ++I+GF+    +  A + F KML  G+ P+
Sbjct: 518 LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 577

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
             TY  +L  C++   +  G K   +   +  +       + +VD+  + G++ +  + I
Sbjct: 578 NFTYATILDTCANLVTVELG-KQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD-FQLI 635

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
                + D + W   +     HG   LG+ A ++ 
Sbjct: 636 FEKAPNRDFVTWNAMVCGYAQHG---LGEEALKIF 667



 Score =  226 bits (577), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 168/607 (27%), Positives = 278/607 (45%), Gaps = 71/607 (11%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           FS + + CS+ + +  G   +  ++    F   V V   LI M++K S DLE A+KVFD 
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMI-LTEFKPTVFVTNCLIQMYIKCS-DLEFAFKVFDG 102

Query: 243 MTEKNTVGWTLM-------------------------------ITRCTQLGCPRDAIRLF 271
           M +++TV W  M                               I+     G  R  I +F
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           L M   G + DR T + V+ +CS LE    G Q+H  A++ G   DV  G +L+DMYAKC
Sbjct: 163 LQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 222

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
                +D S + F  M + N +SW+AII G VQ+    +  ++LF +M +  V  +  TF
Sbjct: 223 K---KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL-RGGLELFKEMQKAGVGVSQSTF 278

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           ASV ++C  L    +  Q++ HA+K     D  +G + + MY +   + DA+K F SL  
Sbjct: 279 ASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN 338

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            NL SYN ++  YA++    +A  +   ++ +G+G    + +      + I    +G Q+
Sbjct: 339 HNLQSYNAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAFRACAVIKGDLEGLQV 398

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   +KS  +SN C+ NA++ MY +C  +  A  VF+EM  R+ +SW ++I    ++G  
Sbjct: 399 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 458

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSAC------------------SHAGLISEGWKHF 613
            + L +F  ML  G++P+  TY +VL AC                  S  GL S      
Sbjct: 459 EKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRLGLDSFVGIAL 518

Query: 614 RSMYDEHGIVQRMEH------------YACMV---DLLGRSGSLTEALEFIRSMPLSADV 658
             MY + G++++ E             +  ++    L  +S    +    +  M +  D 
Sbjct: 519 IDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDN 578

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYASAGHWEYVANIRKR 717
             + T L  C      ELGK     I++++ Q D      L ++Y+  G+ +    I ++
Sbjct: 579 FTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEK 638

Query: 718 MKERNLI 724
              R+ +
Sbjct: 639 APNRDFV 645



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 55/233 (23%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T   TF+ +    S   A+  G+Q HAR+I + F+    + N LI MY +C+++E AF+V
Sbjct: 40  TKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKV 99

Query: 547 FKEMEDRNVISWTSMITGFAKHG--------FAA-----------------------RAL 575
           F  M  R+ +SW +M+ G+A  G        F A                       + +
Sbjct: 100 FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVI 159

Query: 576 EIFYKMLADGIKPNGITYIAVLSACS----HAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
           ++F +M   G   +  T+  VL +CS    H G I             HG+  +M  + C
Sbjct: 160 DVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQ-----------IHGLAVKM-GFDC 207

Query: 632 -------MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
                  ++D+  +   L  +++F  SMP   + + W   +  C  + D   G
Sbjct: 208 DVVTGSALLDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQNDDLRGG 259


>gi|302768409|ref|XP_002967624.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
 gi|300164362|gb|EFJ30971.1| hypothetical protein SELMODRAFT_169299 [Selaginella moellendorffii]
          Length = 795

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 267/803 (33%), Positives = 461/803 (57%), Gaps = 18/803 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL----EPNSVIL-NSLISLY 123
           M  +    ++   + +L +C   R    GK VH L+ R  L     P+  +L N +I +Y
Sbjct: 1   MEAREIQAEISACAAILTACSDLRALPEGKRVHGLVMRESLLQDERPDESLLENIVIQMY 60

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            +CG  + A  +F  M ++ ++V+W+S+IS++   G   DA+ +F +ML  G  P+   F
Sbjct: 61  LRCGCTDLALDVFDRMKDQ-NVVAWTSLISAFTFAGHFGDAMVLFRKMLLSGVSPDRITF 119

Query: 184 SAVIRACSNTE-NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           ++++   S  E N+  G  ++  +++ GY + D  V   +++M+ K   D+E A  VFD 
Sbjct: 120 TSILLKWSGRERNLDEGKRVHSHIMQTGY-EGDRMVMNLVVEMYGKCG-DVEQAGNVFDS 177

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           + + N   WT++I    Q G   + +RL   M  +G  PD +T + V+ AC+ +      
Sbjct: 178 IQDPNVFSWTIIIAAYAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEA 237

Query: 303 KQLHSWAIR-TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           K LH+  I  TGL  D  VG +L+++Y KC   G+++++  VF ++ + +++SW+++I  
Sbjct: 238 KILHAATISSTGLDRDAAVGTALINLYGKC---GALEEAFGVFVQIDNKDIVSWSSMIAA 294

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + QSG + K A++L   M    V PN+ TF +VL+A  +L      ++++   V+ G + 
Sbjct: 295 FAQSG-QAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSD 353

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D C+ ++L+ MY   G +E AR  FES  E+++VS+++M+  Y++N +  +A  L  E+E
Sbjct: 354 DVCLTSALVKMYCNWGWVETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREME 413

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV  ++ TF S +   + +GA+ +G Q+H R+   G + +  +  AL+++Y +C  +E
Sbjct: 414 VDGVQPNSVTFVSAIDACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKCGRLE 473

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A  VF  M+ +N+++WTS+   + ++G  +R+L++ + M   G+KP+GI ++A+L +C+
Sbjct: 474 EAEAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCN 533

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           +AG +S+G  ++  M  + GI   +EH  CMVD+LGR+G L  A + I +M   +  L W
Sbjct: 534 YAGQMSKGLHYYNLMTQDFGIAPAVEHCGCMVDILGRAGKLEAAEQLINTMKFESS-LAW 592

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              L AC+ H DT     AAE I + +P++   ++LLS+++ +AG WE     R+RM  R
Sbjct: 593 MMLLTACKAHNDTARAARAAEKIFQLEPKNATPYVLLSSVFCAAGSWEAAEETRRRMDGR 652

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTL--EIYAELDQLALKIKEFGYLPDTNFV-L 778
            + +  G S IE  ++VH+F       P  L  EI+A L++L  +++  GY+PD   V L
Sbjct: 653 GVQRLLGRSSIEIGDRVHEFVAASDVLPHHLVGEIFAALEKLGREMQGAGYVPDATAVRL 712

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
            ++EE  K   +  HSE +A+  G+IST    P+R+ KNLR+C DCH A K++S +  R 
Sbjct: 713 RDVEEGGKENAVPYHSEMLALGLGIISTPAGTPLRITKNLRMCSDCHIATKFVSKLVHRR 772

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I +RD  R HH ++G CSC DYW
Sbjct: 773 ISVRDGRRHHHFENGVCSCGDYW 795



 Score =  180 bits (457), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 217/436 (49%), Gaps = 16/436 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH-SLLTRSKLEP 111
           +  +G   + +  L  M Q G  PD  T++ +L +C         K++H + ++ + L+ 
Sbjct: 193 YAQNGHCMEVLRLLSRMNQAGVKPDGYTFTTVLGACTAVGALEEAKILHAATISSTGLDR 252

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++ +  +LI+LY KCG L EA  +F  + NK DIVSWSSMI+++   G+   AI + + M
Sbjct: 253 DAAVGTALINLYGKCGALEEAFGVFVQIDNK-DIVSWSSMIAAFAQSGQAKSAIQLLMLM 311

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  PN   F  V+ A ++ +    G  I+  +++ GY D DVC+  AL+ M+     
Sbjct: 312 DLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSD-DVCLTSALVKMYCNWGW 370

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E+A  +F+   E++ V W+ MI   +Q   P  A+ LF +M + G  P+  T    + 
Sbjct: 371 -VETARSIFESSRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGVQPNSVTFVSAID 429

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ +     G QLH      GL  DV V  +LV++Y KC   G ++++  VF  M   N
Sbjct: 430 ACAGVGALRRGTQLHERVRCLGLDKDVPVATALVNLYGKC---GRLEEAEAVFLGMKKKN 486

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAE 408
           +++WT+I   Y Q+ G    ++KL   M    + P+   F ++L +C   G +       
Sbjct: 487 LLTWTSIAMAYGQN-GHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYAGQMSKGLHYY 545

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNL--VSYNTMVDAYA 465
            + T       A++ C    ++ +  R+G++E A +   ++ FE +L  +   T   A+ 
Sbjct: 546 NLMTQDFGIAPAVEHC--GCMVDILGRAGKLEAAEQLINTMKFESSLAWMMLLTACKAHN 603

Query: 466 KNLNSEKAFELLHEIE 481
               + +A E + ++E
Sbjct: 604 DTARAARAAEKIFQLE 619



 Score =  112 bits (281), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 183/387 (47%), Gaps = 25/387 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ + AI  L LM  +G  P+  T+  +L++    + F  GK +H+ + ++    +  + 
Sbjct: 299 GQAKSAIQLLMLMDLEGVRPNNVTFVNVLEAVTSLKAFQYGKEIHARIVQAGYSDDVCLT 358

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++L+ +Y   G +  A  IF+S   +RD+VSWSSMI+ Y        A+ +F EM   G 
Sbjct: 359 SALVKMYCNWGWVETARSIFES-SRERDVVSWSSMIAGYSQNESPARALSLFREMEVDGV 417

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F + I AC+    +  G  ++   ++C   D DV V  AL++++ K    LE A
Sbjct: 418 QPNSVTFVSAIDACAGVGALRRGTQLHE-RVRCLGLDKDVPVATALVNLYGKCG-RLEEA 475

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             VF  M +KN + WT +     Q G    +++L   M L G  PD      ++ +C+  
Sbjct: 476 EAVFLGMKKKNLLTWTSIAMAYGQNGHGSRSLKLLHGMELQGMKPDGIVFVAILVSCNYA 535

Query: 297 ELFTSGKQLHSWAIRT---GLALDV--CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
              + G  LH + + T   G+A  V  C GC +VD+  +    G ++ + ++ + M   +
Sbjct: 536 GQMSKG--LHYYNLMTQDFGIAPAVEHC-GC-MVDILGRA---GKLEAAEQLINTMKFES 588

Query: 352 VMSWTAIIT---GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
            ++W  ++T    +  +    + A K+F   ++ + A  +   +SV  A G+      AE
Sbjct: 589 SLAWMMLLTACKAHNDTARAARAAEKIFQ--LEPKNATPYVLLSSVFCAAGSW---EAAE 643

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYAR 435
           +  T     GR +   +G S I +  R
Sbjct: 644 E--TRRRMDGRGVQRLLGRSSIEIGDR 668


>gi|449530632|ref|XP_004172298.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/623 (39%), Positives = 370/623 (59%), Gaps = 4/623 (0%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VF ++ E N   W  MI       C  DAI L+  M   GFLP+ FT+  V+ AC+    
Sbjct: 70  VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G ++HS  ++ G   DV V  SL+ +Y KC    + DD+ KVFD + D NV+SWTAI
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD---NFDDALKVFDDIPDKNVVSWTAI 186

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           ITGY+ SG   +EA+  F  +++  + P+ F+   VL AC  L D    E +  +    G
Sbjct: 187 ITGYISSG-HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG 245

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              +  V  SL+ MY + G +E A   F ++ EK++VS++TM+  YA N   ++A +L  
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFF 305

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +++   +    YT   +LS  +++GA+  G    + + ++ F SN  +  ALI MYS+C 
Sbjct: 306 QMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCG 365

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +V  A+++F  M+ ++ + W +M+ G + +G A     +F  +   GI+P+  T+I +L 
Sbjct: 366 SVTQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLC 425

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
            C+H G ++EG + F +M     +   +EHY CMVDLLGR+G L EA + I +MP+  + 
Sbjct: 426 GCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNA 485

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           +VW   LG C++H DT L +   + ++E +P +   ++ LSN+Y+    WE    IR  M
Sbjct: 486 VVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTM 545

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           KE+ + K   CSWIE D  VH+F VG+ SH  + +IYA+LD+L  ++K  G++P T FVL
Sbjct: 546 KEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVL 605

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
            ++EEE+K  +L  HSEK+AVAFGLI++  +  IRV KNLRVCGDCH AIK IS +T RE
Sbjct: 606 FDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKRE 665

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I++RD+NRFH   DG CSC DYW
Sbjct: 666 IIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 253/495 (51%), Gaps = 17/495 (3%)

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           F+  K +H+ L R  L+ ++ +LN ++      G  N +  +F  +  + +I  W++MI 
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQV-KEPNIFLWNTMIR 87

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
             V++    DAIH++  M   GF PN +    V++AC+   +V +G  I+  L+K GY D
Sbjct: 88  GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY-D 146

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
            DV V  +L+ ++VK   + + A KVFD + +KN V WT +IT     G  R+AI  F  
Sbjct: 147 HDVFVKTSLLSLYVKCD-NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           ++  G  PD F+L  V++AC+ L   TSG+ +  +   +G+  +V V  SL+DMY KC  
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC-- 263

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G+++ +  +F  M + +++SW+ +I GY  + G  ++A+ LF  M    + P+ +T   
Sbjct: 264 -GNLERANLIFSAMPEKDIVSWSTMIQGYAFN-GLPQQALDLFFQMQSENLKPDCYTMVG 321

Query: 394 VLKACGNL--LDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLF 450
           VL AC  L  LD  +     +  + R   L + V G +LI MY++ G +  A + F ++ 
Sbjct: 322 VLSACATLGALDLGIWA---SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK 378

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           +K+ V +N M+   + N +++  F L   +E  G+     TF  LL G +  G + +G Q
Sbjct: 379 KKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQ 438

Query: 511 IHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAK 567
                +K  F     I  Y  ++ +  R   +  A Q+   M  + N + W +++ G   
Sbjct: 439 FFNN-MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497

Query: 568 HGFAARALEIFYKML 582
           H     A ++  K++
Sbjct: 498 HKDTHLAEQVLKKLI 512



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 11/422 (2%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           AI     M   G  P+  T   +LK+C R  +  LG  +HSLL ++  + +  +  SL+S
Sbjct: 98  AIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLS 157

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           LY KC + ++A K+F  + +K ++VSW+++I+ Y++ G   +AI  F ++LE+G  P+ +
Sbjct: 158 LYVKCDNFDDALKVFDDIPDK-NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSF 216

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
               V+ AC+   +   G  I  ++   G    +V V  +L+DM+VK   +LE A  +F 
Sbjct: 217 SLVKVLAACARLGDCTSGEWIDRYISDSG-MGRNVFVATSLLDMYVKCG-NLERANLIFS 274

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            M EK+ V W+ MI      G P+ A+ LF  M      PD +T+ GV+SAC+ L     
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G    S   R     +  +G +L+DMY+KC   GSV  + ++F  M   + + W A++ G
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKC---GSVTQAWEIFTAMKKKDRVVWNAMMVG 391

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            +   G  K    LFS + +  + P+  TF  +L  C +    N   Q + + +KR  +L
Sbjct: 392 -LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN-MKRVFSL 449

Query: 422 DDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              + +   ++ +  R+G + +A +   ++  + N V +  ++     + ++  A ++L 
Sbjct: 450 TPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLK 509

Query: 479 EI 480
           ++
Sbjct: 510 KL 511



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 153/314 (48%), Gaps = 14/314 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G  ++AI     + + G  PD  +   +L +C R  +   G+ +   ++ S +  N
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  SL+ +Y KCG+L  AN IF +M  K DIVSWS+MI  Y   G    A+ +F +M 
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQ 308

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
                P+ Y    V+ AC+    + +G I    L+    F S+  +G ALIDM+ K GSV
Sbjct: 309 SENLKPDCYTMVGVLSACATLGALDLG-IWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
               A+++F  M +K+ V W  M+   +  G  +    LF  +   G  PD  T  G++ 
Sbjct: 368 --TQAWEIFTAMKKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLC 425

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCV---GCSLVDMYAKCTVDGSVDDSRKVFDRM- 347
            C+       G+Q  +  ++   +L   +   GC +VD+  +    G ++++ ++ + M 
Sbjct: 426 GCTHGGFVNEGRQFFN-NMKRVFSLTPSIEHYGC-MVDLLGRA---GLLNEAHQLINNMP 480

Query: 348 LDHNVMSWTAIITG 361
           +  N + W A++ G
Sbjct: 481 MKPNAVVWGALLGG 494



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 134/271 (49%), Gaps = 7/271 (2%)

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G    ++  F  + E N+  +NTM+         + A  L   +   G   + +T   +L
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              +    +  G +IH+ ++K+G++ +  +  +L+S+Y +C N + A +VF ++ D+NV+
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SWT++ITG+   G    A+  F K+L  G+KP+  + + VL+AC+  G  + G    R +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
            D  G+ + +     ++D+  + G+L  A     +MP   D++ W T +     +G   L
Sbjct: 242 SDS-GMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQGYAFNG---L 296

Query: 677 GKHAAEMILEQDPQD--PAAHILLSNLYASA 705
            + A ++  +   ++  P  + ++  L A A
Sbjct: 297 PQQALDLFFQMQSENLKPDCYTMVGVLSACA 327



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  Q+A+     M  +   PD  T   +L +C       LG    SL+ R++   N V+
Sbjct: 294 NGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVL 353

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +LI +YSKCG + +A +IF +M  K+D V W++M+      G       +F  + + G
Sbjct: 354 GTALIDMYSKCGSVTQAWEIFTAM-KKKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+E  F  ++  C++   V  G   +  + +       +     ++D+  +  + L  
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGL-LNE 471

Query: 236 AYKVFDKMTEK-NTVGWTLMITRC 258
           A+++ + M  K N V W  ++  C
Sbjct: 472 AHQLINNMPMKPNAVVWGALLGGC 495


>gi|225433177|ref|XP_002281549.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130 [Vitis vinifera]
 gi|296083673|emb|CBI23662.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  490 bits (1262), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/687 (36%), Positives = 409/687 (59%), Gaps = 16/687 (2%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS-VDLESAYKVFD 241
            + ++R CS       G  ++   +  G F  D+ +   LIDM+ K S VDL  A  VFD
Sbjct: 7   LAKLLRNCSKNGLFDQGLQVHAAAVNMG-FGFDLIMNNDLIDMYGKCSRVDL--ACSVFD 63

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           +M E+N V WT ++    Q G  + ++ L  +M  SG  P+ FT S  + AC  L +  +
Sbjct: 64  RMLERNVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVEN 123

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G Q+H   +++G      VG + +DMY+KC   G +  + +VF++M   N++SW A+I G
Sbjct: 124 GMQIHGMCVKSGFEWVSVVGNATIDMYSKC---GRIGMAEQVFNKMPFRNLVSWNAMIAG 180

Query: 362 YVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR- 419
           +   G   K  V LF  M  QG+V P+ FTF S LKACG L       Q++   + RG  
Sbjct: 181 HTHEGNGRKSLV-LFQRMQGQGEV-PDEFTFTSTLKACGALGAIRGGTQIHASLITRGFP 238

Query: 420 -ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
            ++ + + ++++ +YA+ G + +A+K F+ + +KNL+S++ ++  +A+  N  +A +L  
Sbjct: 239 ISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFR 298

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++ ++      +  + ++   + +  + +G+Q+H  I+K     +  + N++I MY +C 
Sbjct: 299 QLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCG 358

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
             E A ++F EM+ RNV+SWT MITG+ KHG   +A+ +F +M  DGI+ + + Y+A+LS
Sbjct: 359 LTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLS 418

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSH+GLI E  ++F  + + H +   +EHYACMVD+LGR+G L EA   I +M L  + 
Sbjct: 419 ACSHSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNE 478

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
            +W+T L ACRVHG+ E+G+   E++   D  +P  ++++SN+YA AG+W+    +RK +
Sbjct: 479 GIWQTLLSACRVHGNLEIGREVGEILFRMDTDNPVNYVMMSNIYAEAGYWKECERVRKLV 538

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK-EFGYLPDTNFV 777
           K + L KEAG SW+E + ++H F+ G+ +HP T +I+  L ++  ++K E GY     F 
Sbjct: 539 KAKGLKKEAGQSWVEINKEIHFFYGGDDTHPLTEKIHEMLKEMERRVKEEVGYAYGLRFA 598

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP---IRVFKNLRVCGDCHTAIKYISMV 834
           LH++EEE K + L  HSEK+A+   L+     K    IRVFKNLRVCGDCH  IK +S +
Sbjct: 599 LHDVEEESKEENLRVHSEKLAIGLALVCDGMEKKGGVIRVFKNLRVCGDCHEFIKGLSKI 658

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             +  V+RD+NRFH  +DG CSC DYW
Sbjct: 659 LKKVFVVRDANRFHRFEDGLCSCGDYW 685



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 152/533 (28%), Positives = 266/533 (49%), Gaps = 20/533 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL++C ++  F  G  VH+         + ++ N LI +Y KC  ++ A  +F  M  +R
Sbjct: 10  LLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCSRVDLACSVFDRM-LER 68

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           ++VSW++++  Y+  G    ++ +  EM   G  PNE+ FS  ++AC     V  G  I+
Sbjct: 69  NVVSWTALMCGYLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIH 128

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           G  +K G F+    VG A IDM+ K G + +  A +VF+KM  +N V W  MI   T  G
Sbjct: 129 GMCVKSG-FEWVSVVGNATIDMYSKCGRIGM--AEQVFNKMPFRNLVSWNAMIAGHTHEG 185

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV--CV 320
             R ++ LF  M   G +PD FT +  + AC  L     G Q+H+  I  G  + +   +
Sbjct: 186 NGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNII 245

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             ++VD+YAKC   G + +++KVFDR+   N++SW+A+I G+ Q G    EA+ LF  + 
Sbjct: 246 ASAIVDLYAKC---GYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNL-LEAMDLFRQLR 301

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +     + F  + ++    +L      +Q++ + +K    LD  V NS+I MY + G  E
Sbjct: 302 ESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKCGLTE 361

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +A + F  +  +N+VS+  M+  Y K+   EKA  L + ++  G+      + +LLS  S
Sbjct: 362 EAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAYLALLSACS 421

Query: 501 SIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISW 558
             G I + ++  +R+  +   + N   Y  ++ +  R   ++ A  + + M+ + N   W
Sbjct: 422 HSGLIRESQEYFSRLCNNHQMKPNIEHYACMVDILGRAGQLKEAKNLIENMKLKPNEGIW 481

Query: 559 TSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
            ++++    HG         EI ++M  D    N + Y+ + +  + AG   E
Sbjct: 482 QTLLSACRVHGNLEIGREVGEILFRMDTD----NPVNYVMMSNIYAEAGYWKE 530



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 222/431 (51%), Gaps = 11/431 (2%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           + +R  L+ ++  CS+  LF  G Q+H+ A+  G   D+ +   L+DMY KC+    VD 
Sbjct: 1   MSERQRLAKLLRNCSKNGLFDQGLQVHAAAVNMGFGFDLIMNNDLIDMYGKCS---RVDL 57

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +  VFDRML+ NV+SWTA++ GY+Q  G  K ++ L  +M    V PN FTF++ LKACG
Sbjct: 58  ACSVFDRMLERNVVSWTALMCGYLQE-GNAKGSLALLCEMGYSGVKPNEFTFSTSLKACG 116

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L       Q++   VK G      VGN+ I MY++ GR+  A + F  +  +NLVS+N 
Sbjct: 117 ALGVVENGMQIHGMCVKSGFEWVSVVGNATIDMYSKCGRIGMAEQVFNKMPFRNLVSWNA 176

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+  +    N  K+  L   ++  G     +TF S L    ++GAI  G QIHA +I  G
Sbjct: 177 MIAGHTHEGNGRKSLVLFQRMQGQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRG 236

Query: 520 F--ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           F     + I +A++ +Y++C  +  A +VF  +E +N+ISW+++I GFA+ G    A+++
Sbjct: 237 FPISIRNIIASAIVDLYAKCGYLFEAQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDL 296

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLL 636
           F ++       +G     ++   +   L+ +G + H   +    G+   + +   ++D+ 
Sbjct: 297 FRQLRESVSNVDGFVLSIMMGVFADLALVEQGKQMHCYILKVPSGLDISVAN--SIIDMY 354

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA-AEMILEQDPQDPAAH 695
            + G LTE  E + S     +V+ W   +     HG  E   H    M L+    D  A+
Sbjct: 355 LKCG-LTEEAERLFSEMQVRNVVSWTVMITGYGKHGLGEKAIHLFNRMQLDGIELDEVAY 413

Query: 696 ILLSNLYASAG 706
           + L +  + +G
Sbjct: 414 LALLSACSHSG 424



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 208/403 (51%), Gaps = 16/403 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +G  + ++  L  M   G  P+  T+S  LK+C        G  +H +  +S  E  
Sbjct: 80  YLQEGNAKGSLALLCEMGYSGVKPNEFTFSTSLKACGALGVVENGMQIHGMCVKSGFEWV 139

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           SV+ N+ I +YSKCG +  A ++F  M   R++VSW++MI+ + + G    ++ +F  M 
Sbjct: 140 SVVGNATIDMYSKCGRIGMAEQVFNKM-PFRNLVSWNAMIAGHTHEGNGRKSLVLFQRMQ 198

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSV 231
             G  P+E+ F++ ++AC     +  G  I+  L+  G+       +  A++D++ K   
Sbjct: 199 GQGEVPDEFTFTSTLKACGALGAIRGGTQIHASLITRGFPISIRNIIASAIVDLYAKCGY 258

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
             E A KVFD++ +KN + W+ +I    Q G   +A+ LF  +  S    D F LS ++ 
Sbjct: 259 LFE-AQKVFDRIEQKNLISWSALIQGFAQEGNLLEAMDLFRQLRESVSNVDGFVLSIMMG 317

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
             ++L L   GKQ+H + ++    LD+ V  S++DMY KC   G  +++ ++F  M   N
Sbjct: 318 VFADLALVEQGKQMHCYILKVPSGLDISVANSIIDMYLKC---GLTEEAERLFSEMQVRN 374

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT +ITGY + G  +K A+ LF+ M    +  +   + ++L AC +      +++ +
Sbjct: 375 VVSWTVMITGYGKHGLGEK-AIHLFNRMQLDGIELDEVAYLALLSACSHSGLIRESQEYF 433

Query: 412 T-----HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           +     H +K       C    ++ +  R+G++++A+   E++
Sbjct: 434 SRLCNNHQMKPNIEHYAC----MVDILGRAGQLKEAKNLIENM 472


>gi|125595802|gb|EAZ35582.1| hypothetical protein OsJ_19868 [Oryza sativa Japonica Group]
          Length = 734

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 268/699 (38%), Positives = 411/699 (58%), Gaps = 8/699 (1%)

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+  FV M   G  P    F+++++ C+   ++A G  ++  L   G  DS+     AL 
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARG-IDSEALAATALA 101

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPD 282
           +M+ K     + A +VFD+M  ++ V W  ++    + G  R A+ + + M    G  PD
Sbjct: 102 NMYAKCRRPAD-ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
             TL  V+ AC+      + ++ H++AIR+GL   V V  +++D Y KC   G +  +R 
Sbjct: 161 SITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC---GDIRAARV 217

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           VFD M   N +SW A+I GY Q+G   +EA+ LF+ M++  V     +  + L+ACG L 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGD-SREALALFNRMVEEGVDVTDVSVLAALQACGELG 276

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
             +   +V+   V+ G   +  V N+LI+MY++  R++ A   F+ L  +  VS+N M+ 
Sbjct: 277 CLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMIL 336

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
             A+N  SE A  L   ++   V   ++T  S++   + I    +   IH   I+   + 
Sbjct: 337 GCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           +  +  ALI MY++C  V  A  +F    +R+VI+W +MI G+  HGF   A+E+F +M 
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           + GI PN  T+++VLSACSHAGL+ EG ++F SM +++G+   MEHY  MVDLLGR+G L
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA  FI+ MP+   + V+   LGAC++H + EL + +A+ I E  PQ+   H+LL+N+Y
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           A+A  W+ VA +R  M++  L K  G S I+  N++H F+ G T+H +  EIY+ L +L 
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
            +IK  GY+PDT+ + H++E++ K Q L  HSEK+A+AFGLI T+    I++ KNLRVC 
Sbjct: 637 EEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCN 695

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           DCH A K IS+VTGREI++RD  RFHH KDGKCSC DYW
Sbjct: 696 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 244/484 (50%), Gaps = 9/484 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M+  G  P L T++ LLK C    +   G+ VH+ L    ++  ++   +L ++Y+KC  
Sbjct: 50  MSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRR 109

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVI 187
             +A ++F  M   RD V+W+++++ Y   G    A+ M V M  E G  P+     +V+
Sbjct: 110 PADARRVFDRM-PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            AC+N   +A     + F ++ G  +  V V  A++D + K   D+ +A  VFD M  KN
Sbjct: 169 PACANARALAACREAHAFAIRSG-LEELVNVATAILDAYCKCG-DIRAARVVFDWMPTKN 226

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
           +V W  MI    Q G  R+A+ LF  M+  G      ++   + AC EL     G ++H 
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             +R GL  +V V  +L+ MY+KC     VD +  VFD +     +SW A+I G  Q+G 
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCK---RVDLASHVFDELDRRTQVSWNAMILGCAQNGC 343

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             ++AV+LF+ M    V P+ FT  SV+ A  ++ D   A  ++ ++++     D  V  
Sbjct: 344 -SEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +LI MYA+ GR+  AR  F S  E++++++N M+  Y  +   + A EL  E++  G+  
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
           +  TF S+LS  S  G + +G +    + +  G E     Y  ++ +  R   ++ A+  
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522

Query: 547 FKEM 550
            ++M
Sbjct: 523 IQKM 526



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 257/537 (47%), Gaps = 29/537 (5%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLK 86
           P  +   F   P       N L+  +  +G  + A+   + +  ++G  PD  T   +L 
Sbjct: 110 PADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLP 169

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C  +R     +  H+   RS LE    +  +++  Y KCGD+  A  +F  M  K   V
Sbjct: 170 ACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNS-V 228

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW++MI  Y   G   +A+ +F  M+E G    +    A ++AC     +  G  ++  L
Sbjct: 229 SWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288

Query: 207 LKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
           ++ G  DS+V V  ALI M+ K   VDL S   VFD++  +  V W  MI  C Q GC  
Sbjct: 289 VRIG-LDSNVSVMNALITMYSKCKRVDLAS--HVFDELDRRTQVSWNAMILGCAQNGCSE 345

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           DA+RLF  M L    PD FTL  V+ A +++      + +H ++IR  L  DV V  +L+
Sbjct: 346 DAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALI 405

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DMYAKC   G V+ +R +F+   + +V++W A+I GY  S G  K AV+LF +M    + 
Sbjct: 406 DMYAKC---GRVNIARILFNSARERHVITWNAMIHGY-GSHGFGKAAVELFEEMKSIGIV 461

Query: 386 PNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMED 441
           PN  TF SVL AC    L+D     + Y  ++K    L+  + +  +++ +  R+G++++
Sbjct: 462 PNETTFLSVLSACSHAGLVDEG---REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518

Query: 442 ARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY--TFASLLSG 498
           A    + +  +  L  Y  M+ A   + N E A E   +I + G     Y    A++ + 
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYAN 578

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHC-----IYNALISMYSRCANVEAAFQVFKEM 550
           AS    + +   +   + K+G +         + N + + YS   N + A +++  +
Sbjct: 579 ASMWKDVAR---VRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRL 632


>gi|115465982|ref|NP_001056590.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|7363286|dbj|BAA93030.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113594630|dbj|BAF18504.1| Os06g0112000 [Oryza sativa Japonica Group]
 gi|215737111|dbj|BAG96040.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 734

 Score =  490 bits (1261), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 268/699 (38%), Positives = 411/699 (58%), Gaps = 8/699 (1%)

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+  FV M   G  P    F+++++ C+   ++A G  ++  L   G  DS+     AL 
Sbjct: 43  ALAAFVAMSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARG-IDSEALAATALA 101

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPD 282
           +M+ K     + A +VFD+M  ++ V W  ++    + G  R A+ + + M    G  PD
Sbjct: 102 NMYAKCRRPAD-ARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPD 160

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
             TL  V+ AC+      + ++ H++AIR+GL   V V  +++D Y KC   G +  +R 
Sbjct: 161 SITLVSVLPACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKC---GDIRAARV 217

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           VFD M   N +SW A+I GY Q+G   +EA+ LF+ M++  V     +  + L+ACG L 
Sbjct: 218 VFDWMPTKNSVSWNAMIDGYAQNGD-SREALALFNRMVEEGVDVTDVSVLAALQACGELG 276

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
             +   +V+   V+ G   +  V N+LI+MY++  R++ A   F+ L  +  VS+N M+ 
Sbjct: 277 CLDEGMRVHELLVRIGLDSNVSVMNALITMYSKCKRVDLASHVFDELDRRTQVSWNAMIL 336

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
             A+N  SE A  L   ++   V   ++T  S++   + I    +   IH   I+   + 
Sbjct: 337 GCAQNGCSEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQ 396

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           +  +  ALI MY++C  V  A  +F    +R+VI+W +MI G+  HGF   A+E+F +M 
Sbjct: 397 DVYVLTALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMK 456

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           + GI PN  T+++VLSACSHAGL+ EG ++F SM +++G+   MEHY  MVDLLGR+G L
Sbjct: 457 SIGIVPNETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKL 516

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA  FI+ MP+   + V+   LGAC++H + EL + +A+ I E  PQ+   H+LL+N+Y
Sbjct: 517 DEAWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIY 576

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           A+A  W+ VA +R  M++  L K  G S I+  N++H F+ G T+H +  EIY+ L +L 
Sbjct: 577 ANASMWKDVARVRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRLAKLI 636

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
            +IK  GY+PDT+ + H++E++ K Q L  HSEK+A+AFGLI T+    I++ KNLRVC 
Sbjct: 637 EEIKAVGYVPDTDSI-HDVEDDVKAQLLNTHSEKLAIAFGLIRTAPGTTIQIKKNLRVCN 695

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           DCH A K IS+VTGREI++RD  RFHH KDGKCSC DYW
Sbjct: 696 DCHNATKLISLVTGREIIMRDIQRFHHFKDGKCSCGDYW 734



 Score =  208 bits (530), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 143/484 (29%), Positives = 244/484 (50%), Gaps = 9/484 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M+  G  P L T++ LLK C    +   G+ VH+ L    ++  ++   +L ++Y+KC  
Sbjct: 50  MSSAGAPPVLRTFTSLLKLCAARGDLATGRAVHAQLAARGIDSEALAATALANMYAKCRR 109

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVI 187
             +A ++F  M   RD V+W+++++ Y   G    A+ M V M  E G  P+     +V+
Sbjct: 110 PADARRVFDRM-PVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVL 168

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            AC+N   +A     + F ++ G  +  V V  A++D + K   D+ +A  VFD M  KN
Sbjct: 169 PACANARALAACREAHAFAIRSG-LEELVNVATAILDAYCKCG-DIRAARVVFDWMPTKN 226

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
           +V W  MI    Q G  R+A+ LF  M+  G      ++   + AC EL     G ++H 
Sbjct: 227 SVSWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHE 286

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             +R GL  +V V  +L+ MY+KC     VD +  VFD +     +SW A+I G  Q+G 
Sbjct: 287 LLVRIGLDSNVSVMNALITMYSKCK---RVDLASHVFDELDRRTQVSWNAMILGCAQNGC 343

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             ++AV+LF+ M    V P+ FT  SV+ A  ++ D   A  ++ ++++     D  V  
Sbjct: 344 -SEDAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLT 402

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +LI MYA+ GR+  AR  F S  E++++++N M+  Y  +   + A EL  E++  G+  
Sbjct: 403 ALIDMYAKCGRVNIARILFNSARERHVITWNAMIHGYGSHGFGKAAVELFEEMKSIGIVP 462

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
           +  TF S+LS  S  G + +G +    + +  G E     Y  ++ +  R   ++ A+  
Sbjct: 463 NETTFLSVLSACSHAGLVDEGREYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDEAWAF 522

Query: 547 FKEM 550
            ++M
Sbjct: 523 IQKM 526



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 154/537 (28%), Positives = 257/537 (47%), Gaps = 29/537 (5%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLK 86
           P  +   F   P       N L+  +  +G  + A+   + +  ++G  PD  T   +L 
Sbjct: 110 PADARRVFDRMPVRDRVAWNALVAGYARNGLARMAMEMVVRMQEEEGERPDSITLVSVLP 169

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C  +R     +  H+   RS LE    +  +++  Y KCGD+  A  +F  M  K   V
Sbjct: 170 ACANARALAACREAHAFAIRSGLEELVNVATAILDAYCKCGDIRAARVVFDWMPTKNS-V 228

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW++MI  Y   G   +A+ +F  M+E G    +    A ++AC     +  G  ++  L
Sbjct: 229 SWNAMIDGYAQNGDSREALALFNRMVEEGVDVTDVSVLAALQACGELGCLDEGMRVHELL 288

Query: 207 LKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
           ++ G  DS+V V  ALI M+ K   VDL S   VFD++  +  V W  MI  C Q GC  
Sbjct: 289 VRIG-LDSNVSVMNALITMYSKCKRVDLAS--HVFDELDRRTQVSWNAMILGCAQNGCSE 345

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           DA+RLF  M L    PD FTL  V+ A +++      + +H ++IR  L  DV V  +L+
Sbjct: 346 DAVRLFTRMQLENVKPDSFTLVSVIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALI 405

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DMYAKC   G V+ +R +F+   + +V++W A+I GY  S G  K AV+LF +M    + 
Sbjct: 406 DMYAKC---GRVNIARILFNSARERHVITWNAMIHGY-GSHGFGKAAVELFEEMKSIGIV 461

Query: 386 PNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMED 441
           PN  TF SVL AC    L+D     + Y  ++K    L+  + +  +++ +  R+G++++
Sbjct: 462 PNETTFLSVLSACSHAGLVDEG---REYFTSMKEDYGLEPGMEHYGTMVDLLGRAGKLDE 518

Query: 442 ARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY--TFASLLSG 498
           A    + +  +  L  Y  M+ A   + N E A E   +I + G     Y    A++ + 
Sbjct: 519 AWAFIQKMPMDPGLSVYGAMLGACKLHKNVELAEESAQKIFELGPQEGVYHVLLANIYAN 578

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHC-----IYNALISMYSRCANVEAAFQVFKEM 550
           AS    + +   +   + K+G +         + N + + YS   N + A +++  +
Sbjct: 579 ASMWKDVAR---VRTAMEKNGLQKTPGWSIIQLKNEIHTFYSGSTNHQQAKEIYSRL 632


>gi|449440243|ref|XP_004137894.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g08820-like [Cucumis sativus]
          Length = 688

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 246/623 (39%), Positives = 370/623 (59%), Gaps = 4/623 (0%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VF ++ E N   W  MI       C  DAI L+  M   GFLP+ FT+  V+ AC+    
Sbjct: 70  VFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLD 129

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G ++HS  ++ G   DV V  SL+ +Y KC    + DD+ KVFD + D NV+SWTAI
Sbjct: 130 VRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCD---NFDDALKVFDDIPDKNVVSWTAI 186

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           ITGY+ SG   +EA+  F  +++  + P+ F+   VL AC  L D    E +  +    G
Sbjct: 187 ITGYISSG-HFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSG 245

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              +  V  SL+ MY + G +E A   F ++ EK++VS++TM+  YA N   ++A +L  
Sbjct: 246 MGRNVFVATSLLDMYVKCGNLERANLIFSAMPEKDIVSWSTMIQGYAFNGLPQQALDLFF 305

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +++   +    YT   +LS  +++GA+  G    + + ++ F SN  +  ALI MYS+C 
Sbjct: 306 QMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVLGTALIDMYSKCG 365

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +V  A+++F  M+ ++ + W +M+ G + +G A     +F  +   GI+P+  T+I +L 
Sbjct: 366 SVTQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLC 425

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
            C+H G ++EG + F +M     +   +EHY CMVDLLGR+G L EA + I +MP+  + 
Sbjct: 426 GCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNA 485

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           +VW   LG C++H DT L +   + ++E +P +   ++ LSN+Y+    WE    IR  M
Sbjct: 486 VVWGALLGGCKLHKDTHLAEQVLKKLIELEPWNSGNYVQLSNIYSGNHRWEEAEKIRSTM 545

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           KE+ + K   CSWIE D  VH+F VG+ SH  + +IYA+LD+L  ++K  G++P T FVL
Sbjct: 546 KEQQIQKIRACSWIEIDGIVHEFLVGDKSHWLSEKIYAKLDELGRELKAVGHVPTTEFVL 605

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
            ++EEE+K  +L  HSEK+AVAFGLI++  +  IRV KNLRVCGDCH AIK IS +T RE
Sbjct: 606 FDIEEEEKEHFLGYHSEKLAVAFGLIASPPNHVIRVVKNLRVCGDCHDAIKLISKITKRE 665

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I++RD+NRFH   DG CSC DYW
Sbjct: 666 IIIRDTNRFHTFIDGSCSCRDYW 688



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 252/495 (50%), Gaps = 17/495 (3%)

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           F+  K +H+ L R  L+ ++ +LN ++      G  N +  +F  +  + +I  W++MI 
Sbjct: 29  FNQLKHIHARLLRLHLDQDNYLLNLILCCALDFGSTNYSKLVFSQV-KEPNIFLWNTMIR 87

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
             V++    DAIH++  M   GF PN +    V++AC+   +V +G  I+  L+K GY D
Sbjct: 88  GLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGY-D 146

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
            DV V  +L+ ++VK   + + A KVFD + +KN V WT +IT     G  R+AI  F  
Sbjct: 147 HDVFVKTSLLSLYVKCD-NFDDALKVFDDIPDKNVVSWTAIITGYISSGHFREAIGAFKK 205

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           ++  G  PD F+L  V++AC+ L   TSG+ +  +   +G+  +V V  SL+DMY KC  
Sbjct: 206 LLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRNVFVATSLLDMYVKC-- 263

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G+++ +  +F  M + +++SW+ +I GY  + G  ++A+ LF  M    + P+ +T   
Sbjct: 264 -GNLERANLIFSAMPEKDIVSWSTMIQGYAFN-GLPQQALDLFFQMQSENLKPDCYTMVG 321

Query: 394 VLKACGNL--LDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLF 450
           VL AC  L  LD  +     +  + R   L + V G +LI MY++ G +  A + F ++ 
Sbjct: 322 VLSACATLGALDLGIWA---SSLMDRNEFLSNPVLGTALIDMYSKCGSVTQAWEIFTAMK 378

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            K+ V +N M+   + N +++  F L   +E  G+     TF  LL G +  G + +G Q
Sbjct: 379 RKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQ 438

Query: 511 IHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAK 567
                +K  F     I  Y  ++ +  R   +  A Q+   M  + N + W +++ G   
Sbjct: 439 FFNN-MKRVFSLTPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKL 497

Query: 568 HGFAARALEIFYKML 582
           H     A ++  K++
Sbjct: 498 HKDTHLAEQVLKKLI 512



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 214/422 (50%), Gaps = 11/422 (2%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           AI     M   G  P+  T   +LK+C R  +  LG  +HSLL ++  + +  +  SL+S
Sbjct: 98  AIHLYGSMRGGGFLPNNFTIPFVLKACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLS 157

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           LY KC + ++A K+F  + +K ++VSW+++I+ Y++ G   +AI  F ++LE+G  P+ +
Sbjct: 158 LYVKCDNFDDALKVFDDIPDK-NVVSWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSF 216

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
               V+ AC+   +   G  I  ++   G    +V V  +L+DM+VK   +LE A  +F 
Sbjct: 217 SLVKVLAACARLGDCTSGEWIDRYISDSG-MGRNVFVATSLLDMYVKCG-NLERANLIFS 274

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            M EK+ V W+ MI      G P+ A+ LF  M      PD +T+ GV+SAC+ L     
Sbjct: 275 AMPEKDIVSWSTMIQGYAFNGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDL 334

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G    S   R     +  +G +L+DMY+KC   GSV  + ++F  M   + + W A++ G
Sbjct: 335 GIWASSLMDRNEFLSNPVLGTALIDMYSKC---GSVTQAWEIFTAMKRKDRVVWNAMMVG 391

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            +   G  K    LFS + +  + P+  TF  +L  C +    N   Q + + +KR  +L
Sbjct: 392 -LSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLCGCTHGGFVNEGRQFFNN-MKRVFSL 449

Query: 422 DDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              + +   ++ +  R+G + +A +   ++  + N V +  ++     + ++  A ++L 
Sbjct: 450 TPSIEHYGCMVDLLGRAGLLNEAHQLINNMPMKPNAVVWGALLGGCKLHKDTHLAEQVLK 509

Query: 479 EI 480
           ++
Sbjct: 510 KL 511



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 87/314 (27%), Positives = 152/314 (48%), Gaps = 14/314 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G  ++AI     + + G  PD  +   +L +C R  +   G+ +   ++ S +  N
Sbjct: 190 YISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYISDSGMGRN 249

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  SL+ +Y KCG+L  AN IF +M  K DIVSWS+MI  Y   G    A+ +F +M 
Sbjct: 250 VFVATSLLDMYVKCGNLERANLIFSAMPEK-DIVSWSTMIQGYAFNGLPQQALDLFFQMQ 308

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
                P+ Y    V+ AC+    + +G I    L+    F S+  +G ALIDM+ K GSV
Sbjct: 309 SENLKPDCYTMVGVLSACATLGALDLG-IWASSLMDRNEFLSNPVLGTALIDMYSKCGSV 367

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
               A+++F  M  K+ V W  M+   +  G  +    LF  +   G  PD  T  G++ 
Sbjct: 368 --TQAWEIFTAMKRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHGIRPDENTFIGLLC 425

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCV---GCSLVDMYAKCTVDGSVDDSRKVFDRM- 347
            C+       G+Q  +  ++   +L   +   GC +VD+  +    G ++++ ++ + M 
Sbjct: 426 GCTHGGFVNEGRQFFN-NMKRVFSLTPSIEHYGC-MVDLLGRA---GLLNEAHQLINNMP 480

Query: 348 LDHNVMSWTAIITG 361
           +  N + W A++ G
Sbjct: 481 MKPNAVVWGALLGG 494



 Score =  106 bits (264), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 134/271 (49%), Gaps = 7/271 (2%)

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G    ++  F  + E N+  +NTM+         + A  L   +   G   + +T   +L
Sbjct: 62  GSTNYSKLVFSQVKEPNIFLWNTMIRGLVSKDCFDDAIHLYGSMRGGGFLPNNFTIPFVL 121

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              +    +  G +IH+ ++K+G++ +  +  +L+S+Y +C N + A +VF ++ D+NV+
Sbjct: 122 KACARKLDVRLGLKIHSLLVKAGYDHDVFVKTSLLSLYVKCDNFDDALKVFDDIPDKNVV 181

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SWT++ITG+   G    A+  F K+L  G+KP+  + + VL+AC+  G  + G    R +
Sbjct: 182 SWTAIITGYISSGHFREAIGAFKKLLEMGLKPDSFSLVKVLAACARLGDCTSGEWIDRYI 241

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
            D  G+ + +     ++D+  + G+L  A     +MP   D++ W T +     +G   L
Sbjct: 242 SDS-GMGRNVFVATSLLDMYVKCGNLERANLIFSAMP-EKDIVSWSTMIQGYAFNG---L 296

Query: 677 GKHAAEMILEQDPQD--PAAHILLSNLYASA 705
            + A ++  +   ++  P  + ++  L A A
Sbjct: 297 PQQALDLFFQMQSENLKPDCYTMVGVLSACA 327



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 93/204 (45%), Gaps = 3/204 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  Q+A+     M  +   PD  T   +L +C       LG    SL+ R++   N V+
Sbjct: 294 NGLPQQALDLFFQMQSENLKPDCYTMVGVLSACATLGALDLGIWASSLMDRNEFLSNPVL 353

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +LI +YSKCG + +A +IF +M  ++D V W++M+      G       +F  + + G
Sbjct: 354 GTALIDMYSKCGSVTQAWEIFTAM-KRKDRVVWNAMMVGLSMNGHAKAVFSLFSLVEKHG 412

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+E  F  ++  C++   V  G   +  + +       +     ++D+  +  + L  
Sbjct: 413 IRPDENTFIGLLCGCTHGGFVNEGRQFFNNMKRVFSLTPSIEHYGCMVDLLGRAGL-LNE 471

Query: 236 AYKVFDKMTEK-NTVGWTLMITRC 258
           A+++ + M  K N V W  ++  C
Sbjct: 472 AHQLINNMPMKPNAVVWGALLGGC 495


>gi|224114351|ref|XP_002332376.1| predicted protein [Populus trichocarpa]
 gi|222832200|gb|EEE70677.1| predicted protein [Populus trichocarpa]
          Length = 660

 Score =  489 bits (1260), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 257/666 (38%), Positives = 394/666 (59%), Gaps = 18/666 (2%)

Query: 202 IYGFLLKCG-YFD----SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
           I+  +L+ G +FD    S +   C+L     + S  L+ A  VF ++    +     +I 
Sbjct: 7   IHAQMLRTGLFFDPFTASKIVAFCSL-----QESGSLQYARLVFSQIPNPTSYTCNSIIR 61

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
            CT     ++A+  + +M++ G +PDR+T   +  +C      + GKQ+H  + + G A 
Sbjct: 62  GCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRN---SSEGKQIHCHSTKLGFAS 118

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           D     +L++MY+ C   G +  +RKVFD+M D  V+SW  +I  + Q   +  EAV+LF
Sbjct: 119 DTYAQNTLMNMYSNC---GCLVSARKVFDKMEDKTVVSWATMIGVHAQ-WDQPNEAVRLF 174

Query: 377 SDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
             M++ + V PN  T  +VL AC    D  + ++++ +  + G      +   L+ +Y +
Sbjct: 175 DRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCK 234

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G ++ AR  F+   EKNL S+N M++ + ++ N E+A  L  E++  G+     T ASL
Sbjct: 235 CGCVQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASL 294

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   + +GA+  G+ +HA I K   + +  +  AL+ MY++C ++E A QVF EM +++V
Sbjct: 295 LLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMPEKDV 354

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           ++WT++I G A  G A  AL+ F +M   G+KP+ IT++ VL+ACSHAG + EG  HF S
Sbjct: 355 MTWTALILGLAMCGQAENALQYFDEMHIKGVKPDAITFVGVLAACSHAGFVDEGISHFNS 414

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M D +GI   +EHY  +VD+LGR+G + EA E I+SMP++ D  V    LGACR+HG+ E
Sbjct: 415 MSDTYGIQPTIEHYGGLVDILGRAGRIAEAEELIKSMPMAPDQFVLGGLLGACRIHGNLE 474

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
             + AA+ +LE DP     ++LLSN+Y S+  WE     R+ M ER + K  GCS IE  
Sbjct: 475 AAERAAKQLLEIDPYHSGTYVLLSNIYKSSKKWEEAKRTRELMAERGMRKPPGCSQIEVH 534

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
             VH+F  G++SH ++ EI   L+ +  K+K  GY+PD + VL ++ EE+K   L  HSE
Sbjct: 535 GVVHEFVKGDSSHRQSSEINEMLEDMISKLKNAGYVPDKSEVLFDMAEEEKETELSLHSE 594

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           K+A+AFGL+STS   PIRV KNLR+C DCH+A K IS +  REI++RD NRFHH KDG C
Sbjct: 595 KLAIAFGLLSTSVGTPIRVVKNLRICSDCHSATKLISKLYNREIIVRDRNRFHHFKDGTC 654

Query: 856 SCNDYW 861
           SC  +W
Sbjct: 655 SCRGFW 660



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 127/425 (29%), Positives = 215/425 (50%), Gaps = 29/425 (6%)

Query: 36  FIAQPTTSEPLSNRLIYHLNDGRV-QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P  +    N +I    D  + Q+A+     M  +G  PD  T+  L KSC   RN 
Sbjct: 45  FSQIPNPTSYTCNSIIRGCTDKNLHQEALLFYQEMMVQGLIPDRYTFPSLFKSC---RNS 101

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             GK +H   T+     ++   N+L+++YS CG L  A K+F  M +K  +VSW++MI  
Sbjct: 102 SEGKQIHCHSTKLGFASDTYAQNTLMNMYSNCGCLVSARKVFDKMEDK-TVVSWATMIGV 160

Query: 155 YVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           +    +  +A+ +F  M++     PNE     V+ AC+   ++A+   I+ ++ + G F 
Sbjct: 161 HAQWDQPNEAVRLFDRMMKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHG-FG 219

Query: 214 SDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
             V +   L+D++ K G V L  A  +FDK  EKN   W +MI    +     +A+ LF 
Sbjct: 220 RHVVLNTVLMDVYCKCGCVQL--ARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFR 277

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           +M   G   D+ T++ ++ AC+ L     GK LH++  +  + +DV +G +LVDMYAKC 
Sbjct: 278 EMQTKGIKGDKVTMASLLLACTHLGALELGKWLHAYIKKQRIDVDVALGTALVDMYAKC- 336

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             GS++ + +VF  M + +VM+WTA+I G     G+ + A++ F +M    V P+  TF 
Sbjct: 337 --GSIETAIQVFHEMPEKDVMTWTALILGLAMC-GQAENALQYFDEMHIKGVKPDAITFV 393

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--------NSLISMYARSGRMEDARK 444
            VL AC +   +   ++  +H      ++ D  G          L+ +  R+GR+ +A +
Sbjct: 394 GVLAACSH---AGFVDEGISHF----NSMSDTYGIQPTIEHYGGLVDILGRAGRIAEAEE 446

Query: 445 AFESL 449
             +S+
Sbjct: 447 LIKSM 451



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/377 (27%), Positives = 188/377 (49%), Gaps = 14/377 (3%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD--GSVDDSRKVFDRMLDHNVMSWTAIIT 360
           KQ+H+  +RTGL  D      +V   A C++   GS+  +R VF ++ +    +  +II 
Sbjct: 5   KQIHAQMLRTGLFFDPFTASKIV---AFCSLQESGSLQYARLVFSQIPNPTSYTCNSIIR 61

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G        +EA+  + +M+   + P+ +TF S+ K+C N   S+  +Q++ H+ K G A
Sbjct: 62  GCTDK-NLHQEALLFYQEMMVQGLIPDRYTFPSLFKSCRN---SSEGKQIHCHSTKLGFA 117

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE- 479
            D    N+L++MY+  G +  ARK F+ + +K +VS+ TM+  +A+     +A  L    
Sbjct: 118 SDTYAQNTLMNMYSNCGCLVSARKVFDKMEDKTVVSWATMIGVHAQWDQPNEAVRLFDRM 177

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           ++   V  +  T  ++L+  +    +   ++IH  I + GF  +  +   L+ +Y +C  
Sbjct: 178 MKSENVKPNEVTLVNVLTACARARDLAMVKRIHEYIDEHGFGRHVVLNTVLMDVYCKCGC 237

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           V+ A  +F + +++N+ SW  MI G  +      AL +F +M   GIK + +T  ++L A
Sbjct: 238 VQLARDLFDKAQEKNLFSWNIMINGHVEDSNYEEALLLFREMQTKGIKGDKVTMASLLLA 297

Query: 600 CSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           C+H G +  G W H  +   +  I   +     +VD+  + GS+  A++    MP   DV
Sbjct: 298 CTHLGALELGKWLH--AYIKKQRIDVDVALGTALVDMYAKCGSIETAIQVFHEMP-EKDV 354

Query: 659 LVWRTFLGACRVHGDTE 675
           + W   +    + G  E
Sbjct: 355 MTWTALILGLAMCGQAE 371


>gi|224140235|ref|XP_002323489.1| predicted protein [Populus trichocarpa]
 gi|222868119|gb|EEF05250.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 277/821 (33%), Positives = 454/821 (55%), Gaps = 44/821 (5%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           ++D    LL+  ++  +  L + +H+ +   KL  ++ + N++I+ Y K G + +A ++F
Sbjct: 103 EVDDLFNLLRLSVKYTDIDLARALHASIL--KLGEDTHLGNAVIAAYIKLGLVVDAYEVF 160

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M    D+VS+S++ISS+    ++ +AI +F  M   G  PNEY F A++ AC  +  +
Sbjct: 161 MGMSTP-DVVSYSALISSFSKLNRETEAIQLFFRMRISGIEPNEYSFVAILTACIRSLEL 219

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
            +G  ++   +K GY    V V  ALI ++ K    L+ A  +FD+M +++   W  MI+
Sbjct: 220 EMGLQVHALAIKLGY-SQLVFVANALIGLYGKCGC-LDHAIHLFDEMPQRDIASWNTMIS 277

Query: 257 RCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
              +      A+ LF  +  + GF  D+FTLS +++AC+       G+++H++AIR GL 
Sbjct: 278 SLVKGLSYEKALELFRVLNQNKGFKADQFTLSTLLTACARCHARIQGREIHAYAIRIGLE 337

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK----- 370
            ++ V  +++  Y +C   GS++    +F+RM   ++++WT +IT Y++ G  D      
Sbjct: 338 NNLSVSNAIIGFYTRC---GSLNHVAALFERMPVRDIITWTEMITAYMEFGLVDLAVDMF 394

Query: 371 -------------------------EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
                                    +A+ LF  M+Q       FT   V+ ACG LL   
Sbjct: 395 NKMPEKNSVSYNALLTGFCKNNEGLKALNLFVRMVQEGAELTDFTLTGVINACGLLLKLE 454

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK--NLVSYNTMVDA 463
           ++ Q++   +K G   + C+  +LI M ++ GRM+DA + F+SL     N +   +M+  
Sbjct: 455 ISRQIHGFIIKFGFRSNACIEAALIDMCSKCGRMDDADRMFQSLSTDGGNSIIQTSMICG 514

Query: 464 YAKNLNSEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
           YA+N   E+A  L +  +  G        F S+L    ++G    G+QIH + +K+GF +
Sbjct: 515 YARNGLPEEAICLFYRCQSEGTMVLDEVAFTSILGVCGTLGFHEVGKQIHCQALKTGFHA 574

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
              + N++ISMYS+C N++ A + F  M   +V+SW  +I G   H     AL I+  M 
Sbjct: 575 ELGVGNSIISMYSKCYNIDDAIKAFNTMPGHDVVSWNGLIAGQLLHRQGDEALAIWSSME 634

Query: 583 ADGIKPNGITYIAVLSA--CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
             GIKP+ IT++ ++SA   + + L+ E    F SM   H +    EHYA +V +LG  G
Sbjct: 635 KAGIKPDAITFVLIVSAYKFTSSNLLDECRSLFLSMKMIHDLEPTSEHYASLVGVLGYWG 694

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            L EA E I  MP   +V VWR  L  CR+H +T +GK  A+ I+  +P+DP+ ++L+SN
Sbjct: 695 LLEEAEELINKMPFDPEVSVWRALLDGCRLHANTSIGKRVAKHIIGMEPRDPSTYVLVSN 754

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           LYA++G W     +R+ M++R L K    SW+    ++H F+  + SHP++ +IY+ LD 
Sbjct: 755 LYAASGRWHCSEMVRENMRDRGLRKHPCRSWVIIKKQLHTFYARDKSHPQSNDIYSGLDI 814

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           L LK  + GY PD +FVL E+EE+QK  +LF HS K+A  +GL+ T   +PIRV KN+ +
Sbjct: 815 LILKCLKAGYEPDMSFVLQEVEEQQKKDFLFYHSAKLAATYGLLKTRPGEPIRVVKNILL 874

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           C DCHT +KY ++VT REI+ RD++ FH   +G+CSC  YW
Sbjct: 875 CRDCHTFLKYATVVTQREIIFRDASGFHCFSNGQCSCKGYW 915


>gi|357118962|ref|XP_003561216.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 900

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 258/688 (37%), Positives = 404/688 (58%), Gaps = 8/688 (1%)

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P    F+++++ C+   ++A G  ++  L   G    +     AL +M+ K     +
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARG-LSPEALAATALANMYAKCRRPGD 278

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSAC 293
            A +VFD+M  ++ V W  ++    + G    A+ + + M    G  PD  TL  V+ AC
Sbjct: 279 -ARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPAC 337

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           ++ +   + +++H++A+R G    V V  +++D+Y KC   G+VD +RKVFD M D N +
Sbjct: 338 ADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKC---GAVDSARKVFDGMQDRNSV 394

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW A+I GY ++G    EA+ LF  M+   V     +  + L ACG L   +   +V+  
Sbjct: 395 SWNAMIKGYAENGDA-TEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHEL 453

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            V+ G   +  V N+LI+MY +  R + A + F+ L  K  VS+N M+    +N +SE A
Sbjct: 454 LVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMILGCTQNGSSEDA 513

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L   ++   V   ++T  S++   + I    +   IH   I+   + +  +  ALI M
Sbjct: 514 VRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALIDM 573

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C  V  A  +F    DR+VI+W +MI G+  HG    A+E+F +M + G  PN  T+
Sbjct: 574 YAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNETTF 633

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           ++VLSACSHAGL+ EG ++F SM +++G+   MEHY  MVDLLGR+G L EA  FI+ MP
Sbjct: 634 LSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQKMP 693

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           +   + V+   LGAC++H + EL + +A+ I E +P++   H+LL+N+YA+A  W+ VA 
Sbjct: 694 MEPGISVYGAMLGACKLHKNVELAEESAQRIFELEPEEGVYHVLLANIYANASLWKDVAR 753

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +R  M+++ L K  G S ++  N++H F+ G T+H +  +IYA L +L  +IK  GY+PD
Sbjct: 754 VRTAMEKKGLQKTPGWSIVQLKNEIHTFYSGSTNHQQAKDIYARLAKLIEEIKAVGYVPD 813

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
           T+ + H++E++ K Q L  HSEK+A+A+GLI T+    I++ KNLRVC DCH A K IS+
Sbjct: 814 TDSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCKDCHNATKLISL 872

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VTGREI++RD  RFHH KDGKCSC DYW
Sbjct: 873 VTGREIIMRDIQRFHHFKDGKCSCGDYW 900



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 256/498 (51%), Gaps = 11/498 (2%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G+ P L T++ LLK C    +   G+ VH+ L    L P ++   +L ++Y+KC    +A
Sbjct: 220 GSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATALANMYAKCRRPGDA 279

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACS 191
            ++F  M   RD V+W+++++ Y   G    A+ M V M E  G  P+     +V+ AC+
Sbjct: 280 RRVFDRM-PARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLPACA 338

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVG 250
           + + +     ++ F ++ G FD  V V  A++D++ K G+VD  SA KVFD M ++N+V 
Sbjct: 339 DAQALGACREVHAFAVR-GGFDEQVNVSTAILDVYCKCGAVD--SARKVFDGMQDRNSVS 395

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  MI    + G   +A+ LF  M+  G      ++   + AC EL     G+++H   +
Sbjct: 396 WNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELLV 455

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           R GL  +V V  +L+ MY KC      D + +VFD +     +SW A+I G  Q+G   +
Sbjct: 456 RIGLESNVNVMNALITMYCKCK---RTDLAAQVFDELGYKTRVSWNAMILGCTQNGS-SE 511

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           +AV+LFS M    V P+ FT  S++ A  ++ D   A  ++ ++++     D  V  +LI
Sbjct: 512 DAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALI 571

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            MYA+ GR+  AR  F S  +++++++N M+  Y  + + + A EL  E++ +G   +  
Sbjct: 572 DMYAKCGRVSIARSLFNSARDRHVITWNAMIHGYGSHGSGKVAVELFEEMKSSGKVPNET 631

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           TF S+LS  S  G + +G++  + + +  G E     Y  ++ +  R   +  A+   ++
Sbjct: 632 TFLSVLSACSHAGLVDEGQEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHEAWSFIQK 691

Query: 550 MEDRNVISWTSMITGFAK 567
           M     IS    + G  K
Sbjct: 692 MPMEPGISVYGAMLGACK 709



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 138/460 (30%), Positives = 223/460 (48%), Gaps = 19/460 (4%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLK 86
           P  +   F   P       N L+  +  +G  + A+   + +  + G  PD  T   +L 
Sbjct: 276 PGDARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDGERPDAVTLVSVLP 335

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C  ++     + VH+   R   +    +  +++ +Y KCG ++ A K+F  M + R+ V
Sbjct: 336 ACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSARKVFDGMQD-RNSV 394

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW++MI  Y   G   +A+ +F  M+  G    +    A + AC     +  G  ++  L
Sbjct: 395 SWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELGFLDEGRRVHELL 454

Query: 207 LKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
           ++ G  +S+V V  ALI M+ K    DL  A +VFD++  K  V W  MI  CTQ G   
Sbjct: 455 VRIG-LESNVNVMNALITMYCKCKRTDL--AAQVFDELGYKTRVSWNAMILGCTQNGSSE 511

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           DA+RLF  M L    PD FTL  ++ A +++      + +H ++IR  L  DV V  +L+
Sbjct: 512 DAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSIRLHLDQDVYVLTALI 571

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DMYAKC   G V  +R +F+   D +V++W A+I GY  S G  K AV+LF +M      
Sbjct: 572 DMYAKC---GRVSIARSLFNSARDRHVITWNAMIHGY-GSHGSGKVAVELFEEMKSSGKV 627

Query: 386 PNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMED 441
           PN  TF SVL AC    L+D     Q Y  ++K    L+  + +  +++ +  R+G++ +
Sbjct: 628 PNETTFLSVLSACSHAGLVDEG---QEYFSSMKEDYGLEPGMEHYGTMVDLLGRAGKLHE 684

Query: 442 ARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           A    + +  E  +  Y  M+ A   + N E A E    I
Sbjct: 685 AWSFIQKMPMEPGISVYGAMLGACKLHKNVELAEESAQRI 724



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/424 (26%), Positives = 207/424 (48%), Gaps = 11/424 (2%)

Query: 265 RDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
           R A+  F  M   SG  P   T + ++  C+      +G+ +H+     GL+ +     +
Sbjct: 206 RGALAAFAAMSPASGSGPVLRTFTSLLKLCAARADLATGRAVHAQLAARGLSPEALAATA 265

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L +MYAKC   G   D+R+VFDRM   + ++W A++ GY ++G  +     +     +  
Sbjct: 266 LANMYAKCRRPG---DARRVFDRMPARDRVAWNALVAGYARNGLAEAAVGMVVRMQEEDG 322

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
             P+  T  SVL AC +        +V+  AV+ G      V  +++ +Y + G ++ AR
Sbjct: 323 ERPDAVTLVSVLPACADAQALGACREVHAFAVRGGFDEQVNVSTAILDVYCKCGAVDSAR 382

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           K F+ + ++N VS+N M+  YA+N ++ +A  L   +   GV  +  +  + L     +G
Sbjct: 383 KVFDGMQDRNSVSWNAMIKGYAENGDATEALALFKRMVGEGVDVTDVSVLAALHACGELG 442

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
            + +G ++H  +++ G ESN  + NALI+MY +C   + A QVF E+  +  +SW +MI 
Sbjct: 443 FLDEGRRVHELLVRIGLESNVNVMNALITMYCKCKRTDLAAQVFDELGYKTRVSWNAMIL 502

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH-AGLISEGWKHFRSMYDEHGI 622
           G  ++G +  A+ +F +M  + +KP+  T ++++ A +  +  +   W H  S+     +
Sbjct: 503 GCTQNGSSEDAVRLFSRMQLENVKPDSFTLVSIIPALADISDPLQARWIHGYSI--RLHL 560

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
            Q +     ++D+  + G ++ A     S      V+ W   +     HG    GK A E
Sbjct: 561 DQDVYVLTALIDMYAKCGRVSIARSLFNS-ARDRHVITWNAMIHGYGSHGS---GKVAVE 616

Query: 683 MILE 686
           +  E
Sbjct: 617 LFEE 620


>gi|356540339|ref|XP_003538647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g22690-like [Glycine max]
          Length = 836

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 272/782 (34%), Positives = 433/782 (55%), Gaps = 43/782 (5%)

Query: 116 LNSLISLYSKCGDLNEA----NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           LN LI+   + G L       N      GN   +  ++ +I  Y + G    AI ++V+M
Sbjct: 62  LNKLIASSVQIGTLESLDYARNAFGDDDGNMASLFMYNCLIRGYASAGLGDQAILLYVQM 121

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
           L +G  P++Y F  ++ ACS    ++ G  ++G +LK G  + D+ V  +LI  + + G 
Sbjct: 122 LVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMG-LEGDIFVSNSLIHFYAECGK 180

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           VDL    K+FD M E+N V WT +I   +     ++A+ LF  M  +G  P+  T+  V+
Sbjct: 181 VDL--GRKLFDGMLERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGVEPNPVTMVCVI 238

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SAC++L+    GK++ S+    G+ L   +  +LVDMY KC   G +  +R++FD   + 
Sbjct: 239 SACAKLKDLELGKKVCSYISELGMELSTIMVNALVDMYMKC---GDICAARQIFDECANK 295

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           N++ +  I++ YV       + + +  +M+Q    P+  T  S + AC  L D +V +  
Sbjct: 296 NLVMYNTIMSNYVHHEWA-SDVLVILDEMLQKGPRPDKVTMLSTIAACAQLGDLSVGKSS 354

Query: 411 YTHAVKRGRALDDCVGNSLISMY-------------------------------ARSGRM 439
           + + ++ G    D + N++I MY                                R G M
Sbjct: 355 HAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLIAGLVRDGDM 414

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           E A + F+ + E++LVS+NTM+ A  +    E+A EL  E+++ G+     T   + S  
Sbjct: 415 ELAWRIFDEMLERDLVSWNTMIGALVQVSMFEEAIELFREMQNQGIPGDRVTMVGIASAC 474

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
             +GA+   + +   I K+    +  +  AL+ M+SRC +  +A  VFK ME R+V +WT
Sbjct: 475 GYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKRMEKRDVSAWT 534

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           + I   A  G    A+E+F +ML   +KP+ + ++A+L+ACSH G + +G + F SM   
Sbjct: 535 AAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQGRQLFWSMEKA 594

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           HGI   + HY CMVDLLGR+G L EA++ I+SMP+  + +VW + L ACR H + EL  +
Sbjct: 595 HGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACRKHKNVELAHY 654

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AAE + +  P+    H+LLSN+YASAG W  VA +R +MKE+ + K  G S IE    +H
Sbjct: 655 AAEKLTQLAPERVGIHVLLSNIYASAGKWTDVARVRLQMKEKGVQKVPGSSSIEVQGLIH 714

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F  G+ SH +   I   L+++  ++ E GY+PDT  VL +++E++K   L +HSEK+A+
Sbjct: 715 EFTSGDESHAENTHIGLMLEEINCRLSEAGYVPDTTNVLLDVDEQEKEHLLSRHSEKLAM 774

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           A+GLI+T +  PIRV KNLR+C DCH+  K +S +  REI +RD+NR+H  K+G CSC D
Sbjct: 775 AYGLITTGQGIPIRVVKNLRMCSDCHSFAKLVSKLYNREITVRDNNRYHFFKEGFCSCRD 834

Query: 860 YW 861
           YW
Sbjct: 835 YW 836



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 143/542 (26%), Positives = 265/542 (48%), Gaps = 34/542 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +AI     M   G  PD  T+  LL +C +      G  VH  + +  LE +  + 
Sbjct: 109 GLGDQAILLYVQMLVMGIVPDKYTFPFLLSACSKILALSEGVQVHGAVLKMGLEGDIFVS 168

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI  Y++CG ++   K+F  M  +R++VSW+S+I+ Y  R    +A+ +F +M E G 
Sbjct: 169 NSLIHFYAECGKVDLGRKLFDGM-LERNVVSWTSLINGYSGRDLSKEAVSLFFQMGEAGV 227

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN      VI AC+  +++ +G  +  ++ + G   S + V  AL+DM++K   D+ +A
Sbjct: 228 EPNPVTMVCVISACAKLKDLELGKKVCSYISELGMELSTIMVN-ALVDMYMKCG-DICAA 285

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            ++FD+   KN V +  +++         D + +  +M+  G  PD+ T+   ++AC++L
Sbjct: 286 RQIFDECANKNLVMYNTIMSNYVHHEWASDVLVILDEMLQKGPRPDKVTMLSTIAACAQL 345

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC----------------TV------- 333
              + GK  H++ +R GL     +  +++DMY KC                TV       
Sbjct: 346 GDLSVGKSSHAYVLRNGLEGWDNISNAIIDMYMKCGKREAACKVFEHMPNKTVVTWNSLI 405

Query: 334 -----DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
                DG ++ + ++FD ML+ +++SW  +I   VQ    + EA++LF +M    +  + 
Sbjct: 406 AGLVRDGDMELAWRIFDEMLERDLVSWNTMIGALVQVSMFE-EAIELFREMQNQGIPGDR 464

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
            T   +  ACG L   ++A+ V T+  K    +D  +G +L+ M++R G    A   F+ 
Sbjct: 465 VTMVGIASACGYLGALDLAKWVCTYIEKNDIHVDLQLGTALVDMFSRCGDPSSAMHVFKR 524

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           + ++++ ++   +   A   N+E A EL +E+ +  V      F +LL+  S  G++ +G
Sbjct: 525 MEKRDVSAWTAAIGVMAMEGNTEGAIELFNEMLEQKVKPDDVVFVALLTACSHGGSVDQG 584

Query: 509 EQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFA 566
            Q+   + K+ G   +   Y  ++ +  R   +E A  + + M  + N + W S++    
Sbjct: 585 RQLFWSMEKAHGIRPHIVHYGCMVDLLGRAGLLEEAVDLIQSMPIEPNDVVWGSLLAACR 644

Query: 567 KH 568
           KH
Sbjct: 645 KH 646


>gi|297822703|ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297325073|gb|EFH55493.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 260/712 (36%), Positives = 403/712 (56%), Gaps = 42/712 (5%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           ++I  CS+   +   H     +++ G F              +     LE A KVFD++ 
Sbjct: 36  SLIDRCSSLRQLKQTH---AHMIRTGMFSDPYSASKLFAIAALSSFASLEYARKVFDEIP 92

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSG 302
           + N+  W  +I        P  +I  FLDM+ S     P+++T   ++ A +E+   + G
Sbjct: 93  QPNSFTWNTLIRAYASGPDPVCSIWAFLDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLG 152

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           + LH  AI++ +  DV V  SL+  Y  C   G +D + KVF  + + +V+SW ++I G+
Sbjct: 153 QSLHGMAIKSAVGSDVFVANSLIHCYFSC---GDLDSACKVFTTIKEKDVVSWNSMINGF 209

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           VQ G  DK A++LF  M    V  +H T   VL AC  + D     +V ++  +    ++
Sbjct: 210 VQKGSPDK-ALELFKKMESEDVKASHVTMVGVLSACAKIRDLEFGRRVCSYIEENRVNVN 268

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL----- 477
             + N+++ MY + G +EDA++ F+++ EK+ V++ TM+D YA + + E A E+L     
Sbjct: 269 LTLANAMLDMYTKCGSIEDAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNAMPK 328

Query: 478 --------------------------HEIE-DTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
                                     HE++    +  +  T  S LS  + +GA+  G  
Sbjct: 329 KDIVAWNALISAYEQNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRW 388

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IH+ I K+G + N  + +ALI MYS+C ++E A +VF  +E R+V  W++MI G A HG 
Sbjct: 389 IHSYIKKNGIKMNFYVTSALIHMYSKCGDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGC 448

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
            + A+++FYKM    +KPNG+T+  V  ACSH GL+ E    F  M   +GIV   +HYA
Sbjct: 449 GSEAVDMFYKMQEANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYA 508

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           C+VD+LGRSG L +A++FI +MP+     VW   LGAC++H +  L + A   +LE +P+
Sbjct: 509 CIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMACTRLLELEPR 568

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           +  AH+LLSN+YA +G W+ V+ +RK M+   L KE GCS IE D  +H+F  G+ +HP 
Sbjct: 569 NDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPM 628

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ-KVQYLFQHSEKIAVAFGLISTSKS 809
           + ++Y +L ++  K+K  GY P+ + VL  +EEE+ K Q L  HSEK+A+ +GLIST   
Sbjct: 629 SEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAP 688

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IRV KNLR+CGDCH   K IS +  REI++RD  RFHH ++G+CSCND+W
Sbjct: 689 KAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCNDFW 740



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 207/417 (49%), Gaps = 39/417 (9%)

Query: 66  LDLMTQKGN-HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
           LD+++ +   +P+  T+  L+K+     +  LG+ +H +  +S +  +  + NSLI  Y 
Sbjct: 120 LDMVSSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAIKSAVGSDVFVANSLIHCYF 179

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
            CGDL+ A K+F ++  K D+VSW+SMI+ +V +G    A+ +F +M       +     
Sbjct: 180 SCGDLDSACKVFTTIKEK-DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMV 238

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV------------ 231
            V+ AC+   ++  G  +  ++ +    + ++ +  A++DM+ K GS+            
Sbjct: 239 GVLSACAKIRDLEFGRRVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEE 297

Query: 232 -----------------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
                            D E+A +V + M +K+ V W  +I+   Q G P +A+ +F ++
Sbjct: 298 KDNVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHEL 357

Query: 275 ILSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
            L   +  ++ TL   +SAC+++     G+ +HS+  + G+ ++  V  +L+ MY+KC  
Sbjct: 358 QLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNFYVTSALIHMYSKC-- 415

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G ++ +R+VF+ +   +V  W+A+I G    G    EAV +F  M +  V PN  TF +
Sbjct: 416 -GDLEKAREVFNSVEKRDVFVWSAMIGGLAMHGC-GSEAVDMFYKMQEANVKPNGVTFTN 473

Query: 394 VLKACGNLLDSNVAEQV-YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           V  AC +    + AE + Y      G   +D     ++ +  RSG +E A K  E++
Sbjct: 474 VFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYACIVDVLGRSGYLEKAVKFIEAM 530



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 99/440 (22%), Positives = 188/440 (42%), Gaps = 83/440 (18%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK- 142
           +L +C + R+   G+ V S +  +++  N  + N+++ +Y+KCG + +A ++F +M  K 
Sbjct: 240 VLSACAKIRDLEFGRRVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 299

Query: 143 -----------------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEM-L 172
                                        +DIV+W+++IS+Y   GK  +A+ +F E+ L
Sbjct: 300 NVTWTTMLDGYAISEDYEAAREVLNAMPKKDIVAWNALISAYEQNGKPNEALLVFHELQL 359

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +     N+    + + AC+    + +G  I+ ++ K G    +  V  ALI M+ K   D
Sbjct: 360 QKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNG-IKMNFYVTSALIHMYSKCG-D 417

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LE A +VF+ + +++   W+ MI      GC  +A+ +F  M  +   P+  T + V  A
Sbjct: 418 LEKAREVFNSVEKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQEANVKPNGVTFTNVFCA 477

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS   L    + L          ++   G    D +  C VD        V  R      
Sbjct: 478 CSHTGLVDEAESLF-------YKMESSYGIVPEDKHYACIVD--------VLGR------ 516

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
                  +GY++      +AVK    M    + P+   + ++L AC    + ++AE   T
Sbjct: 517 -------SGYLE------KAVKFIEAM---PIPPSTSVWGALLGACKIHANLSLAEMACT 560

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL--------VSYNTMVDAY 464
             ++     +D     L ++YA+SG+ ++  +  + +    L        +  + M+  +
Sbjct: 561 RLLEL-EPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 619

Query: 465 AKNLN----SEKAFELLHEI 480
               N    SEK +  LHE+
Sbjct: 620 LSGDNAHPMSEKVYGKLHEV 639



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/207 (28%), Positives = 99/207 (47%), Gaps = 6/207 (2%)

Query: 55  NDGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
            +G+  +A+    +L  QK    +  T    L +C +     LG+ +HS + ++ ++ N 
Sbjct: 343 QNGKPNEALLVFHELQLQKNIKLNQITLVSTLSACAQVGALELGRWIHSYIKKNGIKMNF 402

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++LI +YSKCGDL +A ++F S+  KRD+  WS+MI      G   +A+ MF +M E
Sbjct: 403 YVTSALIHMYSKCGDLEKAREVFNSV-EKRDVFVWSAMIGGLAMHGCGSEAVDMFYKMQE 461

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGH-IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
               PN   F+ V  ACS+T  V     + Y      G    D    C ++D+  +    
Sbjct: 462 ANVKPNGVTFTNVFCACSHTGLVDEAESLFYKMESSYGIVPEDKHYAC-IVDVLGRSGY- 519

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRC 258
           LE A K  + M    +T  W  ++  C
Sbjct: 520 LEKAVKFIEAMPIPPSTSVWGALLGAC 546


>gi|357508385|ref|XP_003624481.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240699|gb|ABD32557.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499496|gb|AES80699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 672

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 254/636 (39%), Positives = 384/636 (60%), Gaps = 17/636 (2%)

Query: 239 VFDKMTEKNTV-GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F K  +K +V  W  +I    + G    A+  F  M      P+R T    + +CS L 
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              +GKQ+H  A   G   D+ V  +L+DMY+KC   G ++D+RK+FD + + NV+SWT+
Sbjct: 101 DLCAGKQIHQQAFVFGYGSDIFVASALIDMYSKC---GYLNDARKLFDEIPERNVVSWTS 157

Query: 358 IITGYVQSGGRDKEAVKLFSDMI-----------QGQVAPNHFTFASVLKACGNLLDSNV 406
           +I+GYVQ+  R +EAV LF + +              V  +      V+ AC  +   +V
Sbjct: 158 MISGYVQNE-RAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSV 216

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            E V+  AVK+G      VGN+L+  YA+ G +  +RK F+ + E ++ S+N+++  YA+
Sbjct: 217 TECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGMEETDVCSWNSLIAVYAQ 276

Query: 467 NLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           N  S +AF L  ++   G V  +A T +++L   +  GA+  G+ IH +++K   E N  
Sbjct: 277 NGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLV 336

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           +  +++ MY +C  VE A + F  ++ +NV SWT M+ G+  HG    A+++FY+M+  G
Sbjct: 337 VGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCG 396

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           IKPN IT+++VL+ACSHAGL+ EGW  F  M  E  +   +EHY+CMVDLLGR+G L EA
Sbjct: 397 IKPNYITFVSVLAACSHAGLLKEGWHWFNKMKCEFDVEPGIEHYSCMVDLLGRAGYLKEA 456

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
              I+ M +  D +VW + LGACR+H + ELG+ +A  + + DP +   ++LLSN+YA A
Sbjct: 457 YGLIQEMKVKPDFIVWGSLLGACRIHKNVELGEISARKLFKLDPSNCGYYVLLSNIYADA 516

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W+ V  +R  MK   L+K  G S +E   +VH F VG+  HP+  +IY  LD+L +K+
Sbjct: 517 GRWDDVERMRILMKNHGLLKTPGYSIVEHKGRVHVFLVGDKEHPQHEKIYEYLDELNVKL 576

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           +E GY+P+   VL++++ E+K   L  HSEK+AVAFG++++     I++ KNLR+CGDCH
Sbjct: 577 QEVGYMPNVTSVLYDVDVEEKGMVLRVHSEKLAVAFGIMNSVPGSVIQIIKNLRICGDCH 636

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            AIK IS +  REIV+RDS RFHH KDG CSC DYW
Sbjct: 637 FAIKLISKIVNREIVIRDSKRFHHFKDGLCSCGDYW 672



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 140/449 (31%), Positives = 235/449 (52%), Gaps = 22/449 (4%)

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F    +K  + SW+S+I+ +   G  + A++ F  M +L   PN   F   I++CS+  
Sbjct: 41  MFGKYVDKTSVYSWNSIIADFARSGDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLY 100

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G  I+      GY  SD+ V  ALIDM+ K    L  A K+FD++ E+N V WT M
Sbjct: 101 DLCAGKQIHQQAFVFGY-GSDIFVASALIDMYSKCGY-LNDARKLFDEIPERNVVSWTSM 158

Query: 255 ITRCTQLGCPRDAIRLFLDMIL-----------SGFLPDRFTLSGVVSACSELELFTSGK 303
           I+   Q    R+A+ LF + +L            G   D   L  V+SAC+ + + +  +
Sbjct: 159 ISGYVQNERAREAVFLFKEFLLVDETDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTE 218

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            +H  A++ G    + VG +L+D YAKC   G +  SRKVFD M + +V SW ++I  Y 
Sbjct: 219 CVHGLAVKKGFEGCLAVGNTLMDAYAKC---GEISVSRKVFDGMEETDVCSWNSLIAVYA 275

Query: 364 QSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           Q+ G   EA  LFSDM++ G+V  N  T ++VL AC +     + + ++   VK     +
Sbjct: 276 QN-GLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCIHDQVVKMELEDN 334

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             VG S++ MY + GR+E ARKAF+ L  KN+ S+  MV  Y  + + ++A ++ +E+  
Sbjct: 335 LVVGTSIVDMYCKCGRVEMARKAFDRLKRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIR 394

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANV 540
            G+  +  TF S+L+  S  G + +G     + +K  F+    I  Y+ ++ +  R   +
Sbjct: 395 CGIKPNYITFVSVLAACSHAGLLKEGWHWFNK-MKCEFDVEPGIEHYSCMVDLLGRAGYL 453

Query: 541 EAAFQVFKEMEDR-NVISWTSMITGFAKH 568
           + A+ + +EM+ + + I W S++     H
Sbjct: 454 KEAYGLIQEMKVKPDFIVWGSLLGACRIH 482



 Score =  179 bits (454), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 117/356 (32%), Positives = 183/356 (51%), Gaps = 19/356 (5%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A++    M +   HP+  T+   +KSC    +   GK +H          +  + 
Sbjct: 65  GDSLQALYAFSSMRKLSLHPNRSTFPCTIKSCSSLYDLCAGKQIHQQAFVFGYGSDIFVA 124

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG- 175
           ++LI +YSKCG LN+A K+F  +  +R++VSW+SMIS YV   +  +A+ +F E L +  
Sbjct: 125 SALIDMYSKCGYLNDARKLFDEI-PERNVVSWTSMISGYVQNERAREAVFLFKEFLLVDE 183

Query: 176 ----------FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
                        +      VI AC+     ++   ++G  +K G F+  + VG  L+D 
Sbjct: 184 TDYDEIVGVGVGVDSVLLGCVISACARVCVKSVTECVHGLAVKKG-FEGCLAVGNTLMDA 242

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRF 284
           + K   ++  + KVFD M E +   W  +I    Q G   +A  LF DM+  G +  +  
Sbjct: 243 YAKCG-EISVSRKVFDGMEETDVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAV 301

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           TLS V+ AC+       GK +H   ++  L  ++ VG S+VDMY KC   G V+ +RK F
Sbjct: 302 TLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKC---GRVEMARKAF 358

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           DR+   NV SWT ++ GY    G  KEA+K+F +MI+  + PN+ TF SVL AC +
Sbjct: 359 DRLKRKNVKSWTVMVAGYGMH-GHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSH 413



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 98/365 (26%), Positives = 174/365 (47%), Gaps = 48/365 (13%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           ++ +C R     + + VH L  +   E    + N+L+  Y+KCG+++ + K+F  M  + 
Sbjct: 204 VISACARVCVKSVTECVHGLAVKKGFEGCLAVGNTLMDAYAKCGEISVSRKVFDGM-EET 262

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHII 202
           D+ SW+S+I+ Y   G  V+A  +F +M++ G    N    SAV+ AC+++  + IG  I
Sbjct: 263 DVCSWNSLIAVYAQNGLSVEAFSLFSDMVKRGEVRYNAVTLSAVLLACAHSGALQIGKCI 322

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  ++K    + ++ VG +++DM+ K    +E A K FD++  KN   WT+M+      G
Sbjct: 323 HDQVVKME-LEDNLVVGTSIVDMYCKCG-RVEMARKAFDRLKRKNVKSWTVMVAGYGMHG 380

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             ++A+++F +MI  G  P+  T   V++ACS   L   G     W  +     DV  G 
Sbjct: 381 HGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHAGLLKEGWH---WFNKMKCEFDVEPG- 436

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
             ++ Y+ C VD                            +   G  KEA  L  +M   
Sbjct: 437 --IEHYS-CMVD---------------------------LLGRAGYLKEAYGLIQEM--- 463

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD--DCVGNSLIS-MYARSGRM 439
           +V P+   + S+L AC   +  NV  ++   + ++   LD  +C    L+S +YA +GR 
Sbjct: 464 KVKPDFIVWGSLLGAC--RIHKNV--ELGEISARKLFKLDPSNCGYYVLLSNIYADAGRW 519

Query: 440 EDARK 444
           +D  +
Sbjct: 520 DDVER 524



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 37/114 (32%), Positives = 64/114 (56%), Gaps = 1/114 (0%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T S +L +C  S    +GK +H  + + +LE N V+  S++ +Y KCG +  A K F  +
Sbjct: 302 TLSAVLLACAHSGALQIGKCIHDQVVKMELEDNLVVGTSIVDMYCKCGRVEMARKAFDRL 361

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
             ++++ SW+ M++ Y   G   +A+ +F EM+  G  PN   F +V+ ACS+ 
Sbjct: 362 -KRKNVKSWTVMVAGYGMHGHGKEAMKVFYEMIRCGIKPNYITFVSVLAACSHA 414


>gi|15227619|ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75100656|sp|O82380.1|PP175_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g29760, chloroplastic; Flags: Precursor
 gi|3582328|gb|AAC35225.1| hypothetical protein [Arabidopsis thaliana]
 gi|330253207|gb|AEC08301.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  489 bits (1259), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 263/694 (37%), Positives = 398/694 (57%), Gaps = 40/694 (5%)

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGS-VDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +G +++ G F SD      L  M    S   LE A KVFD++ + N+  W  +I      
Sbjct: 50  HGHMIRTGTF-SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASG 108

Query: 262 GCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
             P  +I  FLDM+  S   P+++T   ++ A +E+   + G+ LH  A+++ +  DV V
Sbjct: 109 PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             SL+  Y  C   G +D + KVF  + + +V+SW ++I G+VQ G  DK A++LF  M 
Sbjct: 169 ANSLIHCYFSC---GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK-ALELFKKME 224

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              V  +H T   VL AC  + +     QV ++  +    ++  + N+++ MY + G +E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT-----SAY----- 490
           DA++ F+++ EK+ V++ TM+D YA + + E A E+L+ +    +       SAY     
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344

Query: 491 ----------------------TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
                                 T  S LS  + +GA+  G  IH+ I K G   N  + +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ALI MYS+C ++E + +VF  +E R+V  W++MI G A HG    A+++FYKM    +KP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           NG+T+  V  ACSH GL+ E    F  M   +GIV   +HYAC+VD+LGRSG L +A++F
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I +MP+     VW   LGAC++H +  L + A   +LE +P++  AH+LLSN+YA  G W
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           E V+ +RK M+   L KE GCS IE D  +H+F  G+ +HP + ++Y +L ++  K+K  
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN 644

Query: 769 GYLPDTNFVLHELEEEQ-KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
           GY P+ + VL  +EEE+ K Q L  HSEK+A+ +GLIST   K IRV KNLRVCGDCH+ 
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSV 704

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K IS +  REI++RD  RFHH ++G+CSCND+W
Sbjct: 705 AKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 211/417 (50%), Gaps = 40/417 (9%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           LD++++   +P+  T+  L+K+     +  LG+ +H +  +S +  +  + NSLI  Y  
Sbjct: 119 LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS 178

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CGDL+ A K+F ++  K D+VSW+SMI+ +V +G    A+ +F +M       +      
Sbjct: 179 CGDLDSACKVFTTIKEK-DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV------------- 231
           V+ AC+   N+  G  +  ++ +    + ++ +  A++DM+ K GS+             
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296

Query: 232 ----------------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
                           D E+A +V + M +K+ V W  +I+   Q G P +A+ +F ++ 
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356

Query: 276 LSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           L   +  ++ TL   +SAC+++     G+ +HS+  + G+ ++  V  +L+ MY+KC   
Sbjct: 357 LQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC--- 413

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G ++ SR+VF+ +   +V  W+A+I G    G  + EAV +F  M +  V PN  TF +V
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN-EAVDMFYKMQEANVKPNGVTFTNV 472

Query: 395 LKACGNLLDSNVAEQVYTHAVKR--GRALDDCVGNSLISMYARSGRMEDARKAFESL 449
             AC +    + AE ++ H ++   G   ++     ++ +  RSG +E A K  E++
Sbjct: 473 FCACSHTGLVDEAESLF-HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 100/441 (22%), Positives = 188/441 (42%), Gaps = 85/441 (19%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK- 142
           +L +C + RN   G+ V S +  +++  N  + N+++ +Y+KCG + +A ++F +M  K 
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297

Query: 143 -----------------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEM-L 172
                                        +DIV+W+++IS+Y   GK  +A+ +F E+ L
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +     N+    + + AC+    + +G  I+ ++ K G    +  V  ALI M+ K   D
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG-IRMNFHVTSALIHMYSKCG-D 415

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LE + +VF+ + +++   W+ MI      GC  +A+ +F  M  +   P+  T + V  A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475

Query: 293 CSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           CS   L    + L H      G+  +        + +  C VD        V  R     
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPE--------EKHYACIVD--------VLGR----- 514

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
                   +GY++      +AVK    M    + P+   + ++L AC    + N+AE   
Sbjct: 515 --------SGYLE------KAVKFIEAM---PIPPSTSVWGALLGACKIHANLNLAEMAC 557

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL--------VSYNTMVDA 463
           T  ++     +D     L ++YA+ G+ E+  +  + +    L        +  + M+  
Sbjct: 558 TRLLEL-EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616

Query: 464 YAKNLN----SEKAFELLHEI 480
           +    N    SEK +  LHE+
Sbjct: 617 FLSGDNAHPMSEKVYGKLHEV 637



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 2/139 (1%)

Query: 56  DGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           +G+  +A+    +L  QK    +  T    L +C +     LG+ +HS + +  +  N  
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++LI +YSKCGDL ++ ++F S+  KRD+  WS+MI      G   +A+ MF +M E 
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460

Query: 175 GFCPNEYCFSAVIRACSNT 193
              PN   F+ V  ACS+T
Sbjct: 461 NVKPNGVTFTNVFCACSHT 479


>gi|125537719|gb|EAY84114.1| hypothetical protein OsI_05496 [Oryza sativa Indica Group]
          Length = 751

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 245/656 (37%), Positives = 382/656 (58%), Gaps = 36/656 (5%)

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSEL 296
           ++F  M E++ V +  +IT  +  G P  +++L+  ++      P R TLS ++   S L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--------- 347
                G  +H   +R G      VG  LVDMYAK    G + D+R+VF  M         
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKM---GLIRDARRVFQEMEAKTVVMYN 216

Query: 348 ----------------------LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
                                 +D + ++WT ++TG  Q+G    EA+ +F  M    V 
Sbjct: 217 TLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG-LQLEALDVFRRMRAEGVG 275

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            + +TF S+L ACG L  S   +Q++ +  +     +  VG++L+ MY++   +  A   
Sbjct: 276 IDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  +  +N++S+  M+  Y +N  SE+A     E++  G+    +T  S++S  +++ ++
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
            +G Q H   + SG      + NAL+++Y +C ++E A ++F EM   + +SWT+++TG+
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           A+ G A   +++F KML +G+KP+G+T+I VLSACS AGL+ +G  +F SM  +H IV  
Sbjct: 456 AQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHDIVPI 515

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
            +HY CM+DL  RSG   EA EFI+ MP S D   W T L +CR+ G+ E+GK AAE +L
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLL 575

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
           E DPQ+PA+++LL +++A+ G W  VA++R+ M++R + KE GCSWI+  NKVH F   +
Sbjct: 576 ETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADD 635

Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
            SHP +  IY +L+ L  K+ E GY PD + VLH++ +  KV  +  HSEK+A+AFGLI 
Sbjct: 636 QSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIF 695

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             +  PIR+ KNLRVC DCH A K+IS +TGR+I++RD+ RFH   DG CSC D+W
Sbjct: 696 VPQEMPIRIVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSDGTCSCGDFW 751



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 246/505 (48%), Gaps = 70/505 (13%)

Query: 108 KLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           ++E  +V++ N+LI+   +C  + +A  +F+ M + RD ++W++M++     G Q++A+ 
Sbjct: 206 EMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALD 264

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M   G   ++Y F +++ AC        G  I+ ++ +  Y D +V VG AL+DM+
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYED-NVFVGSALVDMY 323

Query: 227 VK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
            K  S+ L  A  VF +MT +N + WT MI    Q  C  +A+R F +M + G  PD FT
Sbjct: 324 SKCRSIRLAEA--VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L  V+S+C+ L     G Q H  A+ +GL   + V  +LV +Y KC   GS++D+ ++FD
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKC---GSIEDAHRLFD 438

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M  H+ +SWTA++TGY Q  G+ KE + LF  M+   + P+  TF  VL AC       
Sbjct: 439 EMSFHDQVSWTALVTGYAQF-GKAKETIDLFEKMLVNGLKPDGVTFIGVLSAC------- 490

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV-----SYNTM 460
                                       +R+G +E     F+S+ + + +      Y  M
Sbjct: 491 ----------------------------SRAGLVEKGCDYFDSMQKDHDIVPIDDHYTCM 522

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +D Y+++   ++A E + ++  +     A+ +A+LLS     G +  G+     ++++  
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGKWAAENLLETD- 578

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV--------ISWTSMITGFA----KH 568
             N   Y  L SM++          + + M DR V        I + + +  F+     H
Sbjct: 579 PQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 638

Query: 569 GFAARALE----IFYKMLADGIKPN 589
            F++R  E    +  KM  +G KP+
Sbjct: 639 PFSSRIYEKLEWLNSKMAEEGYKPD 663



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 183/374 (48%), Gaps = 40/374 (10%)

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVL 395
           V D  ++F  M + + +S+ A+ITG+  S G    +V+L+  +++ + V P   T ++++
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGF-SSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
                L D  +   V+   ++ G      VG+ L+ MYA+ G + DAR+ F+ +  K +V
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 456 SYN-------------------------------TMVDAYAKNLNSEKAFELLHEIEDTG 484
            YN                               TMV    +N    +A ++   +   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           VG   YTF S+L+   ++ A  +G+QIHA I ++ +E N  + +AL+ MYS+C ++  A 
Sbjct: 274 VGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            VF+ M  RN+ISWT+MI G+ ++  +  A+  F +M  DGIKP+  T  +V+S+C++  
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            + EG   F  +    G+++ +     +V L G+ GS+ +A      M    D + W   
Sbjct: 394 SLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTAL 451

Query: 665 LGACRVHGDTELGK 678
                V G  + GK
Sbjct: 452 -----VTGYAQFGK 460



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 101/355 (28%), Positives = 168/355 (47%), Gaps = 53/355 (14%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M  +G   D  T+  +L +C        GK +H+ +TR+  E N  
Sbjct: 255 QNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYITRTWYEDNVF 314

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKC  +  A  +F+ M   R+I+SW++MI  Y       +A+  F EM   
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P+++   +VI +C+N  ++  G   +   L  G     + V  AL+ ++ K GS+  
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY-ITVSNALVTLYGKCGSI-- 430

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+++FD+M+  + V WT ++T   Q G  ++ I LF  M+++G  PD  T  GV+SAC
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLVNGLKPDGVTFIGVLSAC 490

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S                R GL   V  GC   D   K                  DH+++
Sbjct: 491 S----------------RAGL---VEKGCDYFDSMQK------------------DHDIV 513

Query: 354 S----WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL 401
                +T +I  Y +S GR KEA +    M     +P+ F +A++L +C   GN+
Sbjct: 514 PIDDHYTCMIDLYSRS-GRFKEAEEFIKQMPH---SPDAFGWATLLSSCRLRGNM 564



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 135/306 (44%), Gaps = 73/306 (23%)

Query: 427 NSLISMYARSGRMEDARKAF---------------------------ESLF----EKNLV 455
           N L++ YA+SGR+  AR+ F                           E LF    E++ V
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111

Query: 456 SYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           SYN ++  ++   +  ++ +L    + +  V  +  T ++++  AS++     G  +H +
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME----------------------- 551
           +++ GF +   + + L+ MY++   +  A +VF+EME                       
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231

Query: 552 --------DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
                   DR+ I+WT+M+TG  ++G    AL++F +M A+G+  +  T+ ++L+AC   
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 604 GLISEGWKHF----RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
               EG +      R+ Y+++  V      + +VD+  +  S+  A    R M    +++
Sbjct: 292 AASEEGKQIHAYITRTWYEDNVFVG-----SALVDMYSKCRSIRLAEAVFRRMTCR-NII 345

Query: 660 VWRTFL 665
            W   +
Sbjct: 346 SWTAMI 351


>gi|15232837|ref|NP_186850.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75193830|sp|Q9S7F4.1|PP206_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g01510
 gi|6091739|gb|AAF03451.1|AC010797_27 hypothetical protein [Arabidopsis thaliana]
 gi|6513930|gb|AAF14834.1|AC011664_16 hypothetical protein [Arabidopsis thaliana]
 gi|332640228|gb|AEE73749.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/756 (34%), Positives = 443/756 (58%), Gaps = 14/756 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N+V  N++IS + K GD++ A  +F +M + R +V+W+ ++  Y       +A  +F +M
Sbjct: 78  NTVSTNTMISGHVKTGDVSSARDLFDAMPD-RTVVTWTILMGWYARNSHFDEAFKLFRQM 136

Query: 172 LELGFC--PNEYCFSAVIRACSN-TENVAIGHIIYGFLLKCGYFDSD--VCVGCALIDMF 226
                C  P+   F+ ++  C++     A+G + + F +K G FD++  + V   L+  +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV-HAFAVKLG-FDTNPFLTVSNVLLKSY 194

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            +    L+ A  +F+++ EK++V +  +IT   + G   ++I LFL M  SG  P  FT 
Sbjct: 195 CEVR-RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           SGV+ A   L  F  G+QLH+ ++ TG + D  VG  ++D Y+K      V ++R +FD 
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK---HDRVLETRMLFDE 310

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M + + +S+  +I+ Y Q+  + + ++  F +M        +F FA++L    NL    +
Sbjct: 311 MPELDFVSYNVVISSYSQAD-QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             Q++  A+         VGNSL+ MYA+    E+A   F+SL ++  VS+  ++  Y +
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
                   +L  ++  + +     TFA++L  ++S  ++  G+Q+HA II+SG   N   
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            + L+ MY++C +++ A QVF+EM DRN +SW ++I+  A +G    A+  F KM+  G+
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ ++ + VL+ACSH G + +G ++F++M   +GI  + +HYACM+DLLGR+G   EA 
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASA 705
           + +  MP   D ++W + L ACR+H +  L + AAE +   +  +D AA++ +SN+YA+A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G WE V +++K M+ER + K    SW+E ++K+H F   + +HP   EI  ++++L  +I
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           +  GY PDT+ V+ +++E+ K++ L  HSE++AVAF LIST +  PI V KNLR C DCH
Sbjct: 730 EREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCH 789

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            AIK IS +  REI +RD++RFHH  +G CSC DYW
Sbjct: 790 AAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 222/438 (50%), Gaps = 26/438 (5%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DG   ++I     M Q G+ P   T+S +LK+ +   +F LG+ +H+L   +    ++ +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N ++  YSK   + E   +F  M  + D VS++ +ISSY    +   ++H F EM  +G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           F    + F+ ++   +N  ++ +G  ++   L     DS + VG +L+DM+ K  +  E 
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEM-FEE 404

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +F  + ++ TV WT +I+   Q G     ++LF  M  S    D+ T + V+ A + 
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 GKQLH++ IR+G   +V  G  LVDMYAKC   GS+ D+ +VF+ M D N +SW
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC---GSIKDAVQVFEEMPDRNAVSW 521

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I+ +  +G   + A+  F+ MI+  + P+  +   VL AC +       EQ      
Sbjct: 522 NALISAHADNGD-GEAAIGAFAKMIESGLQPDSVSILGVLTACSH---CGFVEQ----GT 573

Query: 416 KRGRALDDCVGNS--------LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
           +  +A+    G +        ++ +  R+GR  +A K  + + FE + + ++++++A   
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI 633

Query: 467 NLN---SEKAFELLHEIE 481
           + N   +E+A E L  +E
Sbjct: 634 HKNQSLAERAAEKLFSME 651



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 57/226 (25%), Positives = 103/226 (45%), Gaps = 35/226 (15%)

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA----- 463
           +V    +K G   D C  N ++    R G++  ARK ++ +  KN VS NTM+       
Sbjct: 34  RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93

Query: 464 --------------------------YAKNLNSEKAFELLHEIEDTGVGT--SAYTFASL 495
                                     YA+N + ++AF+L  ++  +   T     TF +L
Sbjct: 94  DVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTL 153

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNH--CIYNALISMYSRCANVEAAFQVFKEMEDR 553
           L G +         Q+HA  +K GF++N    + N L+  Y     ++ A  +F+E+ ++
Sbjct: 154 LPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACVLFEEIPEK 213

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           + +++ ++ITG+ K G    ++ +F KM   G +P+  T+  VL A
Sbjct: 214 DSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKA 259



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 26/235 (11%)

Query: 54  LNDGRVQKAIFT--LDLMTQ-KGNH--PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           L  G VQK +    L L T+ +G++   D  T++ +LK+     +  LGK +H+ + RS 
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
              N    + L+ +Y+KCG + +A ++F+ M + R+ VSW+++IS++ + G    AI  F
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAF 541

Query: 169 VEMLELGFCPNEYCFSAVIRACSN-------TENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
            +M+E G  P+      V+ ACS+       TE       IYG   K  ++         
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY-------AC 594

Query: 222 LIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC----TQLGCPRDAIRLF 271
           ++D+  +       A K+ D+M  E + + W+ ++  C     Q    R A +LF
Sbjct: 595 MLDLLGRNG-RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648



 Score = 55.8 bits (133), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 32/107 (29%), Positives = 56/107 (52%), Gaps = 4/107 (3%)

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           ++ ARIIK+GF+++ C  N ++    R   V AA +V+ EM  +N +S  +MI+G  K G
Sbjct: 34  RVDARIIKTGFDTDTCRSNFIVEDLLRRGQVSAARKVYDEMPHKNTVSTNTMISGHVKTG 93

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
             + A ++F  M    +    +T+  ++   +      E +K FR M
Sbjct: 94  DVSSARDLFDAMPDRTV----VTWTILMGWYARNSHFDEAFKLFRQM 136


>gi|302804548|ref|XP_002984026.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
 gi|300148378|gb|EFJ15038.1| hypothetical protein SELMODRAFT_30095 [Selaginella moellendorffii]
          Length = 745

 Score =  489 bits (1258), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 268/752 (35%), Positives = 431/752 (57%), Gaps = 9/752 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++ + N +I +Y KC    +A ++F  +  +R+  SWS ++  YV      +A+ ++ EM
Sbjct: 1   DTFLANMIIQMYGKCKSPEDARQVFDRI-KQRNAFSWSILVECYVQNAMYQEALEVYKEM 59

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           +      + Y  S+V+ AC+   +V  G ++     + G F+ DV V  +LI +F K   
Sbjct: 60  VRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELG-FEKDVVVATSLIHLFAKCGC 118

Query: 232 DLESAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
            LE A  VF  M   ++ +  T MI    + G    A+  +  M   G  PD FT + ++
Sbjct: 119 -LEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMRSQGLEPDAFTYAAIL 177

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            ACS  +    GK +H   + +    ++ V  +L+ MYAKC   GS+ DS+ +F  M   
Sbjct: 178 GACSSPDFLLDGKHIHKHILESKHFGNISVRNALITMYAKC---GSLKDSKSLFLTMDVK 234

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V+SW A+I  Y   G  DK+A  LF  M      P+ +TF+S+L AC +         +
Sbjct: 235 DVVSWNAMIAAYTLYG-HDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRML 293

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +     RG   D  + N+LISM+ R G +E AR+ F S+ +K L ++NTM+ AYA+    
Sbjct: 294 HVRITARGFDRDFAMQNNLISMFTRCGSLESARRYFYSIEKKELGAWNTMLAAYAQFDKG 353

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           + A  L   +   G     +TF+S++   +S+GA+ +G+ IH      GFE +  +  AL
Sbjct: 354 KDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGTAL 413

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           ++MY++C ++  A + F  + +++V+SW++MI   A+HG A  ALE+ + M   GI  N 
Sbjct: 414 VNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAEEALELSHLMNLQGIAQNE 473

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T  +VL ACSH G + EG  +F  +  + GI +  E+    +DLLGR+G L EA   + 
Sbjct: 474 VTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGFIDLLGRAGWLKEAEHVLH 533

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           +MP     +   T LG C+VHGD   GK   + I+  +P++P +++LL+N+YA+AG W+ 
Sbjct: 534 TMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVALEPENPGSYVLLNNMYAAAGRWDD 593

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK-EFG 769
           VA +R+ M+++ + ++ GCS IE  +K+++F VG+TS+P+ LEI AEL++L  ++K E G
Sbjct: 594 VAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSNPRNLEIRAELERLYSRMKEEEG 653

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+PDT  V H++ +++K + L  HSEK+A+ FGLI++     +R+ KNLRVC DCHT  K
Sbjct: 654 YVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSPPGSTLRIIKNLRVCSDCHTVGK 713

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             S +TGR I++RD  RFHH + G CSC DYW
Sbjct: 714 LASKITGRRIIVRDGTRFHHFEGGICSCGDYW 745



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/534 (27%), Positives = 273/534 (51%), Gaps = 10/534 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +   Q+A+     M +K    D  T S +L +C +  +   G++V         E +
Sbjct: 43  YVQNAMYQEALEVYKEMVRKEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKD 102

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V+  SLI L++KCG L EA  +F+SMG  RDI+S ++MI +YV  GK   A+  + +M 
Sbjct: 103 VVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYVRHGKNDLALDTYWKMR 162

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
             G  P+ + ++A++ ACS+ + +  G  I+  +L+  +F  ++ V  ALI M+ K GS 
Sbjct: 163 SQGLEPDAFTYAAILGACSSPDFLLDGKHIHKHILESKHF-GNISVRNALITMYAKCGS- 220

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+ +  +F  M  K+ V W  MI   T  G  +DA  LF  M   G  PD +T S ++ 
Sbjct: 221 -LKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILG 279

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+  +    G+ LH      G   D  +  +L+ M+ +C   GS++ +R+ F  +    
Sbjct: 280 ACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMFTRC---GSLESARRYFYSIEKKE 336

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           + +W  ++  Y Q   + K+A+ L+ +M+     P+ FTF+SV+ +C +L      + ++
Sbjct: 337 LGAWNTMLAAYAQF-DKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIH 395

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             +   G   D  +G +L++MYA+ G + DA+K+F+ +  K++VS++ M+ A A++ ++E
Sbjct: 396 ECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQHGHAE 455

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNAL 530
           +A EL H +   G+  +  T +S+L   S  G + +G      + +  G E +       
Sbjct: 456 EALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVGF 515

Query: 531 ISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLA 583
           I +  R   ++ A  V   M  + + ++  +++ G   HG   R   +  +++A
Sbjct: 516 IDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKALTKRIVA 569


>gi|449491114|ref|XP_004158804.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g15510, chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/807 (34%), Positives = 464/807 (57%), Gaps = 12/807 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G +++A+  L+ M +     + D Y  LL+ C   R    G  V+ L++ SK      + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+S++ + G+L +A  +F  M ++RD+ SW+ ++  Y   G   +A++++  ML    
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKM-SERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN Y F +V++ C+   ++A G  I+  +++ G F+SDV VG ALI M+VK   D+ +A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG-FESDVDVGNALITMYVKCG-DISNA 252

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +FDKM +++ + W  MI+   + G   + + LF  M      PD  T++ V SAC  L
Sbjct: 253 RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           +    G+ +H + +++    D+ +  SL+ MY+     G ++++  VF RM   +V+SWT
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSL---GRLEEAETVFSRMESKDVVSWT 369

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I   V S     +AV+ +  M    + P+  T  SVL AC  +   ++  +++  A+K
Sbjct: 370 AMIASLV-SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G      V NSLI MY++   +++A + F ++  KN+VS+ +++     N  S +A   
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLF 488

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             +++++ +  ++ T  S+LS  + IGA+ +G++IHA  +++G   +  + NA++ MY R
Sbjct: 489 FRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVR 547

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C     A   F   + ++V +W  ++TG+A+ G A  A+E+F KML   I P+ IT+I++
Sbjct: 548 CGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L ACS +G+++EG ++F  M +++ +   ++HYAC+VD+LGR+G L +A +FI+ MP+  
Sbjct: 607 LCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRP 666

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  +W   L ACR+H + ELG+ AA+ + E+D +    +ILL NLYA  G+W+ V+ +R 
Sbjct: 667 DAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRS 726

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M+ER L  + GCSW+E   KVH F  G+ SH ++ EI   LD    K+KE G+    + 
Sbjct: 727 LMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSS 786

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
              E+ E  +      HSE+ A+AFGLI+T+   PI V KNL +C  CH  +K+IS +  
Sbjct: 787 FTSEI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVXKNLYMCHSCHNMVKFISTIVR 845

Query: 837 REIVLRDSNRFHHIKDGKCSCND--YW 861
           REI +RD   +HH KDG CSC D  YW
Sbjct: 846 REISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 239/509 (46%), Gaps = 55/509 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   + +    +M +    PDL T + +  +C    N  LG+ VH  + +S+   +
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSLI +YS  G L EA  +F  M +K D+VSW++MI+S V+      A+  + +M+
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESK-DVVSWTAMIASLVSHKLPFKAVETY-KMM 391

Query: 173 EL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           EL G  P+E    +V+ AC+   ++ +G  ++   +K G   S V V  +LIDM+ K   
Sbjct: 392 ELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV-SHVIVSNSLIDMYSKCKC 450

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +++A +VF  ++ KN V WT +I          +A+ LF   +     P+  TL  V+S
Sbjct: 451 -VDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLS 508

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ +     GK++H+ A+RTG+  D  +  +++DMY +C   G    +   F+     +
Sbjct: 509 ACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRC---GRKVPALNQFNSQ-KKD 564

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V +W  ++TGY Q  G+ K AV+LF  M++ ++ P+  TF S+L AC             
Sbjct: 565 VTAWNILLTGYAQQ-GQAKLAVELFDKMLELEIHPDEITFISLLCAC------------- 610

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-----NLVSYNTMVDAYAK 466
                                 ++SG + +  + F  +  K     NL  Y  +VD   +
Sbjct: 611 ----------------------SKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGR 648

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
               + A++    I+D  +   A  + +LL+       +  GE    R+ +   +S    
Sbjct: 649 AGQLDDAYDF---IQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVG-Y 704

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNV 555
           Y  L ++Y+ C N +   +V   M +R +
Sbjct: 705 YILLCNLYAGCGNWDKVSKVRSLMRERGL 733


>gi|357436397|ref|XP_003588474.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355477522|gb|AES58725.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 668

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 244/594 (41%), Positives = 380/594 (63%), Gaps = 8/594 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD+I +G L PDR   + ++  C+ L     GK +H+  + +    D+ +  S++ MYAK
Sbjct: 79  LDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAK 138

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--GRDKEAVKLFSDMIQGQVAPNH 388
           C   GS++ +R+VFD M   +V++WT++ITGY Q G       A+ LF +M++  + PN 
Sbjct: 139 C---GSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNE 195

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           F  +S++K CG L      +Q++    K G   +  VG+SL+ MYAR G + ++R  F+ 
Sbjct: 196 FALSSLVKCCGFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARCGELRESRLVFDE 255

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           L  KN VS+N ++  +A+    E+A  L  +++  G G + +T+++LL  +S+ G++ +G
Sbjct: 256 LESKNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQG 315

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           + +HA ++KSG +    + N L+ MY++  N+  A +VF  +   +V+S  SM+ G+A+H
Sbjct: 316 KWLHAHMMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQH 375

Query: 569 GFAARALEIFYKM-LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           G    A+E+F +M L   I+PN IT+++VL+ACSHAGL+ EG  +F  M  ++G+  ++ 
Sbjct: 376 GLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELM-KKYGLEPKLS 434

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HY  +VDL GR+G L +A  FI  MP+  +  +W   LGA ++H +TE+G +AA+ +LE 
Sbjct: 435 HYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTEMGAYAAQKVLEL 494

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           DP  P AH LLSN+YASAG W+ VA +RK MK+  L KE  CSW+E +N VH F   + S
Sbjct: 495 DPFYPGAHTLLSNIYASAGQWKDVAKVRKEMKDSGLKKEPACSWVEIENSVHIFSANDIS 554

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS 807
           HP+  ++Y   + L  KIKE GY+PDT+ V   +++++K   L  HSEK+A+AF L++T 
Sbjct: 555 HPQKNKVYEMWENLNQKIKEIGYVPDTSHVHVFVDQQEKELNLQYHSEKLALAFALLNTK 614

Query: 808 KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
               IR+ KN+RVCGDCH+AIKY+S+V  REI++RD+NRFHH +DG CSC DYW
Sbjct: 615 PGSVIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFRDGSCSCRDYW 668



 Score =  210 bits (535), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 150/472 (31%), Positives = 246/472 (52%), Gaps = 32/472 (6%)

Query: 18  FKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQK---------AIFTLDL 68
           ++ + PS    PP SS P     TT++   N   Y ++D  + +          +  LDL
Sbjct: 25  YQSAAPST---PPQSSIPDNNTTTTNKNKCNISHYIIDDTNLLRPSLNPNSTTGLHVLDL 81

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           +      PD   Y+ LLK C        GKLVH+ L  SK   + VI NS++ +Y+KCG 
Sbjct: 82  INNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVIKNSILFMYAKCGS 141

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRG---KQVDAIHMFVEMLELGFCPNEYCFSA 185
           L  A ++F  M  K D+V+W+SMI+ Y   G       A+ +F+EM+  G  PNE+  S+
Sbjct: 142 LEIARQVFDEMCVK-DVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSS 200

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++ C    +   G  I+G   K G F  +V VG +L+DM+ +   +L  +  VFD++  
Sbjct: 201 LVKCCGFLGSCVDGKQIHGCCWKYG-FQENVFVGSSLVDMYARCG-ELRESRLVFDELES 258

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN V W  +I+   + G   +A+ LF+ M   GF    FT S ++ + S       GK L
Sbjct: 259 KNEVSWNALISGFARKGEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWL 318

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  +++G  L   VG +L+ MYAK    G++ D++KVFDR++  +V+S  +++ GY Q 
Sbjct: 319 HAHMMKSGKKLVGYVGNTLLHMYAK---SGNICDAKKVFDRLVKVDVVSCNSMLIGYAQH 375

Query: 366 GGRDKEAVKLFSD-MIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALD 422
            G  KEAV+LF + M+  ++ PN  TF SVL AC    LLD    E +Y   + +   L+
Sbjct: 376 -GLGKEAVELFEEMMLWVEIEPNDITFLSVLTACSHAGLLD----EGLYYFELMKKYGLE 430

Query: 423 DCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
             + +  +++ ++ R+G ++ A+   E +  E N   +  ++ A   + N+E
Sbjct: 431 PKLSHYTTVVDLFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMHKNTE 482



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/397 (30%), Positives = 209/397 (52%), Gaps = 13/397 (3%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
           P+   ++ +++ C+    +  G +++  L+    F +D+ +  +++ M+ K GS  LE A
Sbjct: 89  PDRTIYNKLLKRCTMLGKLKQGKLVHTHLMN-SKFRNDLVIKNSILFMYAKCGS--LEIA 145

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLG---CPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            +VFD+M  K+ V WT MIT  +Q G       A+ LFL+M+  G  P+ F LS +V  C
Sbjct: 146 RQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVRDGLRPNEFALSSLVKCC 205

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             L     GKQ+H    + G   +V VG SLVDMYA+C   G + +SR VFD +   N +
Sbjct: 206 GFLGSCVDGKQIHGCCWKYGFQENVFVGSSLVDMYARC---GELRESRLVFDELESKNEV 262

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW A+I+G+ +  G  +EA+ LF  M +       FT++++L +          + ++ H
Sbjct: 263 SWNALISGFARK-GEGEEALGLFVKMQREGFGATEFTYSALLCSSSTTGSLEQGKWLHAH 321

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K G+ L   VGN+L+ MYA+SG + DA+K F+ L + ++VS N+M+  YA++   ++A
Sbjct: 322 MMKSGKKLVGYVGNTLLHMYAKSGNICDAKKVFDRLVKVDVVSCNSMLIGYAQHGLGKEA 381

Query: 474 FELLHEIED-TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
            EL  E+     +  +  TF S+L+  S  G + +G      + K G E     Y  ++ 
Sbjct: 382 VELFEEMMLWVEIEPNDITFLSVLTACSHAGLLDEGLYYFELMKKYGLEPKLSHYTTVVD 441

Query: 533 MYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           ++ R   ++ A    +EM  + N   W +++     H
Sbjct: 442 LFGRAGLLDQAKSFIEEMPIEPNATIWGALLGASKMH 478



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/182 (29%), Positives = 100/182 (54%), Gaps = 4/182 (2%)

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N NS     +L  I +  +      +  LL   + +G + +G+ +H  ++ S F ++  I
Sbjct: 69  NPNSTTGLHVLDLINNGSLEPDRTIYNKLLKRCTMLGKLKQGKLVHTHLMNSKFRNDLVI 128

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR---ALEIFYKMLA 583
            N+++ MY++C ++E A QVF EM  ++V++WTSMITG+++ G+A+    AL +F +M+ 
Sbjct: 129 KNSILFMYAKCGSLEIARQVFDEMCVKDVVTWTSMITGYSQDGYASSATTALVLFLEMVR 188

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
           DG++PN     +++  C   G   +G K       ++G  + +   + +VD+  R G L 
Sbjct: 189 DGLRPNEFALSSLVKCCGFLGSCVDG-KQIHGCCWKYGFQENVFVGSSLVDMYARCGELR 247

Query: 644 EA 645
           E+
Sbjct: 248 ES 249


>gi|225423549|ref|XP_002274857.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g69350, mitochondrial [Vitis vinifera]
          Length = 875

 Score =  488 bits (1257), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 273/783 (34%), Positives = 452/783 (57%), Gaps = 18/783 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +LK+C    +  +G  VH  + +   E ++V+  SL+ +Y +   L++A K F +M   R
Sbjct: 106 VLKACSGFGDLSVGGKVHGRVIKCGFESDAVVETSLLCMYGEMSCLDDACKAFDTM-PIR 164

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           D+V+WSS++ ++V  G+  + + MF +M+     P+     +V  ACS   ++ +G  ++
Sbjct: 165 DVVAWSSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVH 224

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G++++    +S+  +  +LI M+ K   DL SA ++F+ +  + T  WT MI+   Q GC
Sbjct: 225 GYVVR-REIESNASLNNSLIVMYGKLG-DLYSAERLFENVPCRMTAPWTPMISCYNQSGC 282

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL--ALDVCVG 321
            ++A+ +F  M      P++ T+ GV+ AC+ L     G+ +H + IR  +   LD  +G
Sbjct: 283 FQEALNVFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDF-LG 341

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +L+++YA     G++ D  KVF+ + +  ++SW  +I+ + ++G + +EA+ LF  M  
Sbjct: 342 PALMELYAD---TGNLRDCHKVFETIKEKTILSWNTLISIFTRNG-QPEEALLLFVQMQT 397

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + P+ ++ AS L ACG +  S +  Q++ + +K G   +D V N+LI MYA+ G +  
Sbjct: 398 QGLMPDSYSLASSLSACGTISFSQLGAQIHGYIIKTGN-FNDFVQNALIDMYAKCGFVHS 456

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A K FE + EK+LV++N+M+  +++N  S +A  L  ++    V     TF S++   S 
Sbjct: 457 ANKMFEKIKEKSLVTWNSMICGFSQNGYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSH 516

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +G + KG+ +H ++I  G   +  +  AL  MYS+C  ++ A  VF  M +R+++SW+ M
Sbjct: 517 LGYLEKGKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVM 576

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I G+  HG     + +F +ML  GIKPN IT++ +LSACSHAG + EG  +F SM  E G
Sbjct: 577 IAGYGMHGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSM-SEFG 635

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           +  + +H+ACMVDLL R+G L  A + I S+P  A+  +W   L  CR+H   ++ K   
Sbjct: 636 VEPKHDHFACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIHKRIDIIKSIE 695

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           + +L+ D  D   + LLSN+YA  G W+    +R  MK + L K  G S IE D K+++F
Sbjct: 696 KNLLDVDTADTGYYTLLSNIYAEEGTWDKFGKVRSMMKSKGLRKVPGYSTIEIDKKIYRF 755

Query: 742 HVGETSHPKTLEIYAELDQLA--LKIKEFGYLPDTNFV-LHELEEEQKVQYLFQHSEKIA 798
             G+TSH +T +IY  L+     +  + +   PD + V   +  +E  V     HSEK+A
Sbjct: 756 GPGDTSHSQTKDIYRFLENFRSLVHAQVYDSEPDNSIVGTSKFNKENNV---VSHSEKLA 812

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           +AFG+I+T     +R+ KNLRVC DCH+  K  S +TGREI++RD NRFH  ++G CSCN
Sbjct: 813 IAFGIINTRPGTTLRISKNLRVCRDCHSFAKIASKITGREIIMRDLNRFHCFRNGSCSCN 872

Query: 859 DYW 861
           DYW
Sbjct: 873 DYW 875



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 142/523 (27%), Positives = 270/523 (51%), Gaps = 8/523 (1%)

Query: 47  SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           S+ ++  + +G+  + +     M  +   PD  T   + ++C    +  LG+ VH  + R
Sbjct: 170 SSIVLNFVQNGQASEGLDMFSQMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVR 229

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
            ++E N+ + NSLI +Y K GDL  A ++F+++   R    W+ MIS Y   G   +A++
Sbjct: 230 REIESNASLNNSLIVMYGKLGDLYSAERLFENVPC-RMTAPWTPMISCYNQSGCFQEALN 288

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F +M E    PN+     V+ AC+    V  G  ++GF+++         +G AL++++
Sbjct: 289 VFAKMQEFKMEPNQVTMVGVLCACARLGRVKEGRSVHGFVIRRAMDPELDFLGPALMELY 348

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
              + +L   +KVF+ + EK  + W  +I+  T+ G P +A+ LF+ M   G +PD ++L
Sbjct: 349 AD-TGNLRDCHKVFETIKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSL 407

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           +  +SAC  +     G Q+H + I+TG   D  V  +L+DMYAKC   G V  + K+F++
Sbjct: 408 ASSLSACGTISFSQLGAQIHGYIIKTGNFNDF-VQNALIDMYAKC---GFVHSANKMFEK 463

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           + + ++++W ++I G+ Q+ G   EA+ LF  M    V  +  TF SV++AC +L     
Sbjct: 464 IKEKSLVTWNSMICGFSQN-GYSVEAITLFDQMYMNCVKMDKLTFLSVIQACSHLGYLEK 522

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + V+   +  G   D  +  +L  MY++ G ++ A   F+ + E+++VS++ M+  Y  
Sbjct: 523 GKWVHHKLIMYGLRKDSYLDTALTDMYSKCGELQMAHGVFDRMSERSIVSWSVMIAGYGM 582

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           +        L +++  +G+  +  TF  +LS  S  GA+ +G+     + + G E  H  
Sbjct: 583 HGQINATISLFNQMLGSGIKPNDITFMHILSACSHAGAVEEGKLYFNSMSEFGVEPKHDH 642

Query: 527 YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           +  ++ + SR  ++  A+Q+   +    N   W +++ G   H
Sbjct: 643 FACMVDLLSRAGDLNGAYQIITSLPFPANSSIWGALLNGCRIH 685



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 124/467 (26%), Positives = 215/467 (46%), Gaps = 53/467 (11%)

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
           T+  QLH+    TGL         L++ YA+    G  + S++VFD     +   W  +I
Sbjct: 15  TTLTQLHAHLFITGLHRHPPASTKLIESYAQI---GIFESSKRVFDTFPKPDSFMWGVLI 71

Query: 360 TGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
             YV  GG  +EAV L+ +M+ Q Q   ++F F SVLKAC    D +V  +V+   +K G
Sbjct: 72  KCYVW-GGFFEEAVSLYHEMVYQDQTQISNFVFPSVLKACSGFGDLSVGGKVHGRVIKCG 130

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  V  SL+ MY     ++DA KAF+++  +++V+++++V  + +N  + +  ++  
Sbjct: 131 FESDAVVETSLLCMYGEMSCLDDACKAFDTMPIRDVVAWSSIVLNFVQNGQASEGLDMFS 190

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++    V   + T  S+    S +G++  G  +H  +++   ESN  + N+LI MY +  
Sbjct: 191 QMISEAVEPDSVTMLSVTEACSELGSLRLGRSVHGYVVRREIESNASLNNSLIVMYGKLG 250

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           ++ +A ++F+ +  R    WT MI+ + + G    AL +F KM    ++PN +T + VL 
Sbjct: 251 DLYSAERLFENVPCRMTAPWTPMISCYNQSGCFQEALNVFAKMQEFKMEPNQVTMVGVLC 310

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQR--------------MEHYA-------------- 630
           AC+  G + EG    RS+   HG V R              ME YA              
Sbjct: 311 ACARLGRVKEG----RSV---HGFVIRRAMDPELDFLGPALMELYADTGNLRDCHKVFET 363

Query: 631 ----------CMVDLLGRSGSLTEALEFIRSMP---LSADVLVWRTFLGACRVHGDTELG 677
                      ++ +  R+G   EAL     M    L  D     + L AC     ++LG
Sbjct: 364 IKEKTILSWNTLISIFTRNGQPEEALLLFVQMQTQGLMPDSYSLASSLSACGTISFSQLG 423

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
                 I++    +      L ++YA  G       + +++KE++L+
Sbjct: 424 AQIHGYIIKTGNFNDFVQNALIDMYAKCGFVHSANKMFEKIKEKSLV 470


>gi|359473818|ref|XP_002263197.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g13230, mitochondrial-like [Vitis vinifera]
          Length = 611

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 242/569 (42%), Positives = 364/569 (63%), Gaps = 5/569 (0%)

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C + +  + GK LH   ++ G  LD+     L++MY K      + D+ K+FD M + N 
Sbjct: 48  CIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDF---LCDASKLFDEMPERNT 104

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +S+  +I GY +S  R  EA++LF  +   +V PN FTFASVL+AC  +   N+  Q++ 
Sbjct: 105 ISFVTLIQGYAESV-RFLEAIELFVRL-HREVLPNQFTFASVLQACATMEGLNLGNQIHC 162

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +K G   D  V N+L+ +YA+ GRME++ + F     +N V++NT++  + +  + EK
Sbjct: 163 HVIKIGLHSDVFVSNALMDVYAKCGRMENSMELFAESPHRNDVTWNTVIVGHVQLGDGEK 222

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  L   + +  V  +  T++S L   +S+ A+  G QIH+  +K+ F+ +  + NALI 
Sbjct: 223 ALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVVTNALID 282

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++C +++ A  VF  M  ++ +SW +MI+G++ HG    AL IF KM    +KP+ +T
Sbjct: 283 MYAKCGSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGREALRIFDKMQETEVKPDKLT 342

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VLSAC++AGL+ +G  +F SM  +HGI   +EHY CMV LLGR G L +A++ I  +
Sbjct: 343 FVGVLSACANAGLLDQGQAYFTSMIQDHGIEPCIEHYTCMVWLLGRGGHLDKAVKLIDEI 402

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P    V+VWR  LGAC +H D ELG+ +A+ +LE +PQD A H+LLSN+YA+A  W+ VA
Sbjct: 403 PFQPSVMVWRALLGACVIHNDIELGRISAQRVLEMEPQDKATHVLLSNMYATAKRWDNVA 462

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           ++RK MK + + KE G SWIE+   VH F VG+TSHP+   I   L+ L +K K+ GY+P
Sbjct: 463 SVRKNMKRKGVKKEPGLSWIESQGTVHSFTVGDTSHPEVRVINGMLEWLHMKTKKAGYIP 522

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           + N VL ++E+E+K + L+ HSE++A++FG+I T    PIR+ KNLR+C DCH AIK IS
Sbjct: 523 NYNVVLLDVEDEEKERLLWVHSERLALSFGIIRTPSGSPIRIMKNLRICVDCHAAIKCIS 582

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V  REIV+RD NRFHH ++G CSC DYW
Sbjct: 583 KVVQREIVVRDINRFHHFQEGLCSCGDYW 611



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/389 (30%), Positives = 211/389 (54%), Gaps = 18/389 (4%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+  L+ CI+      GK +H  + +     +    N L+++Y K   L +A+K+F  M 
Sbjct: 41  YANALQDCIQKDEPSRGKGLHCEILKRGGCLDLFAWNILLNMYVKSDFLCDASKLFDEMP 100

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            +R+ +S+ ++I  Y    + ++AI +FV  L     PN++ F++V++AC+  E + +G+
Sbjct: 101 -ERNTISFVTLIQGYAESVRFLEAIELFVR-LHREVLPNQFTFASVLQACATMEGLNLGN 158

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            I+  ++K G   SDV V  AL+D++ K    +E++ ++F +   +N V W  +I    Q
Sbjct: 159 QIHCHVIKIG-LHSDVFVSNALMDVYAKCG-RMENSMELFAESPHRNDVTWNTVIVGHVQ 216

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
           LG    A+RLFL+M+         T S  + AC+ L     G Q+HS  ++T    D+ V
Sbjct: 217 LGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAALEPGLQIHSLTVKTTFDKDIVV 276

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-GRDKEAVKLFSDM 379
             +L+DMYAKC   GS+ D+R VFD M   + +SW A+I+GY   G GR  EA+++F  M
Sbjct: 277 TNALIDMYAKC---GSIKDARLVFDLMNKQDEVSWNAMISGYSMHGLGR--EALRIFDKM 331

Query: 380 IQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYAR 435
            + +V P+  TF  VL AC N  LLD     Q Y  ++ +   ++ C+ +   ++ +  R
Sbjct: 332 QETEVKPDKLTFVGVLSACANAGLLDQG---QAYFTSMIQDHGIEPCIEHYTCMVWLLGR 388

Query: 436 SGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            G ++ A K  + + F+ +++ +  ++ A
Sbjct: 389 GGHLDKAVKLIDEIPFQPSVMVWRALLGA 417



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 165/321 (51%), Gaps = 18/321 (5%)

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFT---FASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           G   ++ KL  + + G V+P+ F    +A+ L+ C    + +  + ++   +KRG  LD 
Sbjct: 15  GFSVQSAKLTQEFV-GHVSPSEFNSHAYANALQDCIQKDEPSRGKGLHCEILKRGGCLDL 73

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
              N L++MY +S  + DA K F+ + E+N +S+ T++  YA+++   +A EL   +   
Sbjct: 74  FAWNILLNMYVKSDFLCDASKLFDEMPERNTISFVTLIQGYAESVRFLEAIELFVRLHRE 133

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
            V  + +TFAS+L   +++  +  G QIH  +IK G  S+  + NAL+ +Y++C  +E +
Sbjct: 134 -VLPNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENS 192

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            ++F E   RN ++W ++I G  + G   +AL +F  ML   ++   +TY + L AC+  
Sbjct: 193 MELFAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASL 252

Query: 604 GLISEGWK----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
             +  G +      ++ +D+  +V        ++D+  + GS+ +A   +  +    D +
Sbjct: 253 AALEPGLQIHSLTVKTTFDKDIVVTN-----ALIDMYAKCGSIKDA-RLVFDLMNKQDEV 306

Query: 660 VWRTFLGACRVHGDTELGKHA 680
            W   +    +HG   LG+ A
Sbjct: 307 SWNAMISGYSMHG---LGREA 324



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 84/295 (28%), Positives = 152/295 (51%), Gaps = 18/295 (6%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T++ +L++C      +LG  +H  + +  L  +  + N+L+ +Y+KCG +  + ++
Sbjct: 136 PNQFTFASVLQACATMEGLNLGNQIHCHVIKIGLHSDVFVSNALMDVYAKCGRMENSMEL 195

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F    ++ D V+W+++I  +V  G    A+ +F+ MLE      E  +S+ +RAC++   
Sbjct: 196 FAESPHRND-VTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAA 254

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  G  I+   +K   FD D+ V  ALIDM+ K GS+  + A  VFD M +++ V W  M
Sbjct: 255 LEPGLQIHSLTVKTT-FDKDIVVTNALIDMYAKCGSI--KDARLVFDLMNKQDEVSWNAM 311

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+  +  G  R+A+R+F  M  +   PD+ T  GV+SAC+   L   G+   +  I+   
Sbjct: 312 ISGYSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDH- 370

Query: 315 ALDVCVGCSLVDMYAKCTV-----DGSVDDSRKVFDRM-LDHNVMSWTAIITGYV 363
            ++ C+       +  C V      G +D + K+ D +    +VM W A++   V
Sbjct: 371 GIEPCIE------HYTCMVWLLGRGGHLDKAVKLIDEIPFQPSVMVWRALLGACV 419



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 58/226 (25%), Positives = 110/226 (48%), Gaps = 4/226 (1%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P  ++   N +I  H+  G  +KA+     M +        TYS  L++C      
Sbjct: 196 FAESPHRNDVTWNTVIVGHVQLGDGEKALRLFLNMLEYRVQATEVTYSSALRACASLAAL 255

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G  +HSL  ++  + + V+ N+LI +Y+KCG + +A  +F  M NK+D VSW++MIS 
Sbjct: 256 EPGLQIHSLTVKTTFDKDIVVTNALIDMYAKCGSIKDARLVFDLM-NKQDEVSWNAMISG 314

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G   +A+ +F +M E    P++  F  V+ AC+N   +  G   +  +++    + 
Sbjct: 315 YSMHGLGREALRIFDKMQETEVKPDKLTFVGVLSACANAGLLDQGQAYFTSMIQDHGIEP 374

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCT 259
            +     ++ +  +G   L+ A K+ D++  + + + W  ++  C 
Sbjct: 375 CIEHYTCMVWLLGRGG-HLDKAVKLIDEIPFQPSVMVWRALLGACV 419


>gi|297811097|ref|XP_002873432.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319269|gb|EFH49691.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 970

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 287/805 (35%), Positives = 460/805 (57%), Gaps = 43/805 (5%)

Query: 69  MTQKGNHPDLDTY-SLLLKSC-IRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           M   G+ P   T+ SL+  +C +   +  L + +   + +S    +  + + L+S ++K 
Sbjct: 197 MQCDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGFLTDLFVGSGLVSAFAKS 256

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYC-FS 184
           G L  A KIF  M   R+ V+ + ++   V +    +A  +F++M  +    P  Y    
Sbjct: 257 GSLIHARKIFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSMIDVSPESYVILL 315

Query: 185 AVIRACSNTENVAI--GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
           +     S  E V +  G  ++G ++  G  D  V +G  L++M+ K GS+    A +VF 
Sbjct: 316 SSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI--ADARRVFC 373

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            MTEK++V W  MIT   Q  C  +A+  +  M     LP  FTL   +S+C+ L+    
Sbjct: 374 FMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRRHEILPGSFTLISSISSCASLKWAKL 433

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+Q+H  +++ G+ L+V V  +L+ +YA+    G +++ RK+F  M +H+ +SW +II  
Sbjct: 434 GQQIHGESLKLGIDLNVSVSNALMTLYAE---TGCLNECRKIFSSMPEHDQVSWNSIIGA 490

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
              S     EAV  F + ++     N  TF+SVL A  +L    + +Q++  A+K   A 
Sbjct: 491 LASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIAD 550

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           +    N+LI+ Y + G M+   K F  + E+ + V++N+M+  Y  N    KA +L+  +
Sbjct: 551 EATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFM 610

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
             TG    ++ +A++LS  +S+  + +G ++HA  +++  ES+  + +AL+ MYS+C  +
Sbjct: 611 MQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRL 670

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSA 599
           + A + F  M                          +F  M  DG   P+ +T++ VLSA
Sbjct: 671 DYALRFFNTMP-------------------------LFANMKLDGQTPPDHVTFVGVLSA 705

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CSHAGL+ EG+KHF SM D +G+  R+EH++CM DLLGR+G L +  +FI  MP+  +VL
Sbjct: 706 CSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIEKMPMKPNVL 765

Query: 660 VWRTFLGAC-RVHG-DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
           +WRT LGAC R +G   ELGK AAEM+ + +P++   ++LL N+YA+ G WE +   RK+
Sbjct: 766 IWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKK 825

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
           MK+ ++ KEAG SW+   + VH F  G+ SHP    IY +L +L  K+++ GY+P T F 
Sbjct: 826 MKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKMRDAGYVPQTGFA 885

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           L++LE+E K + L  HSEK+AVAF L +  S + PIR+ KNLRVCGDCH+A K+IS + G
Sbjct: 886 LYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKHISKIEG 945

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R+I+LRDSNRFHH +DG+CSC+D+W
Sbjct: 946 RQIILRDSNRFHHFQDGECSCSDFW 970



 Score =  207 bits (527), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 173/604 (28%), Positives = 287/604 (47%), Gaps = 43/604 (7%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
            ++SCI  R     KL HS L ++ LE +  + N+LI+ Y + GD   A K+F  M   R
Sbjct: 9   FVQSCIGHRG--AAKLFHSRLYKNGLEKDVYLCNNLINAYLETGDSVSARKVFDEM-PLR 65

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI--GHI 201
           + VSW+ ++S Y   G+  +A+    +M++ G   N Y F + +RAC   ++V I  G  
Sbjct: 66  NCVSWACVVSGYSRNGEHKEALVFLRDMVKEGVFSNHYAFVSALRACQELDSVGILFGRQ 125

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+G L K  Y   D  V   LI M+ K    L  A + FD +  KN+V W  +I+  +Q 
Sbjct: 126 IHGLLFKLSY-AVDAVVSNVLISMYWKCGGSLGYALRAFDDVQVKNSVSWNSIISVYSQT 184

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVS-ACS----ELELFTSGKQLHSWAIRTGLAL 316
           G  R A ++F  M   G  P  +T   +V+ ACS    ++ L    +Q+     ++G   
Sbjct: 185 GDQRFAFKMFYSMQCDGSRPTEYTFGSLVTTACSLTEPDVRLL---EQIMCTIQKSGFLT 241

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV-QSGGRDKEAVKL 375
           D+ VG  LV  +AK    GS+  +RK+F++M   N ++   ++ G V Q  G  +EA KL
Sbjct: 242 DLFVGSGLVSAFAK---SGSLIHARKIFNQMETRNAVTLNGLMVGLVRQKWG--EEATKL 296

Query: 376 FSDMIQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV--------- 425
           F DM     V+P  +          +  + ++AE+V    +K+GR +   V         
Sbjct: 297 FMDMNSMIDVSPESYVIL-----LSSFPEYSLAEEV---GLKKGREVHGHVITTGLVDFM 348

Query: 426 ---GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
              GN L++MYA+ G + DAR+ F  + EK+ VS+N+M+    +N    +A E    +  
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFCFMTEKDSVSWNSMITGLDQNSCFIEAVERYQSMRR 408

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             +   ++T  S +S  +S+     G+QIH   +K G + N  + NAL+++Y+    +  
Sbjct: 409 HEILPGSFTLISSISSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGCLNE 468

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFA-ARALEIFYKMLADGIKPNGITYIAVLSACS 601
             ++F  M + + +SW S+I   A    +   A+  F   L  G K N IT+ +VLSA S
Sbjct: 469 CRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVS 528

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
                  G K    +  ++ I         ++   G+ G +    +    M    D + W
Sbjct: 529 SLSFGELG-KQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTW 587

Query: 662 RTFL 665
            + +
Sbjct: 588 NSMI 591



 Score = 44.7 bits (104), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 25/87 (28%), Positives = 46/87 (52%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++  + KA+  +  M Q G   D   Y+ +L +         G  VH+   R+ LE +
Sbjct: 594 YIHNELLAKALDLVWFMMQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSM 139
            V+ ++L+ +YSKCG L+ A + F +M
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTM 680


>gi|449436591|ref|XP_004136076.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Cucumis sativus]
          Length = 878

 Score =  488 bits (1256), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 276/807 (34%), Positives = 464/807 (57%), Gaps = 12/807 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G +++A+  L+ M +     + D Y  LL+ C   R    G  V+ L++ SK      + 
Sbjct: 76  GNLEQAMKRLESMLELRIEVEEDAYIALLRLCEWRRAPDEGSRVYELVSSSKSCLCVRLG 135

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+S++ + G+L +A  +F  M ++RD+ SW+ ++  Y   G   +A++++  ML    
Sbjct: 136 NALLSMFVRFGNLLDAWYVFGKM-SERDVFSWNVLVGGYAKAGCFDEALNLYHRMLWAEI 194

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN Y F +V++ C+   ++A G  I+  +++ G F+SDV VG ALI M+VK   D+ +A
Sbjct: 195 RPNVYTFPSVLKTCAGVSDIARGKEIHAHVIRFG-FESDVDVGNALITMYVKCG-DISNA 252

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +FDKM +++ + W  MI+   + G   + + LF  M      PD  T++ V SAC  L
Sbjct: 253 RMLFDKMPKRDRISWNAMISGYFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELL 312

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           +    G+ +H + +++    D+ +  SL+ MY+     G ++++  VF RM   +V+SWT
Sbjct: 313 DNERLGRGVHGYVVKSEFGGDISMNNSLIQMYSSL---GRLEEAETVFSRMESKDVVSWT 369

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I   V S     +AV+ +  M    + P+  T  SVL AC  +   ++  +++  A+K
Sbjct: 370 AMIASLV-SHKLPFKAVETYKMMELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIK 428

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G      V NSLI MY++   +++A + F ++  KN+VS+ +++     N  S +A   
Sbjct: 429 TGLVSHVIVSNSLIDMYSKCKCVDNALEVFRNISGKNVVSWTSLILGLRINNRSFEALLF 488

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             +++++ +  ++ T  S+LS  + IGA+ +G++IHA  +++G   +  + NA++ MY R
Sbjct: 489 FRQMKES-MKPNSVTLISVLSACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVR 547

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C     A   F   + ++V +W  ++TG+A+ G A  A+E+F KML   I P+ IT+I++
Sbjct: 548 CGRKVPALNQFNS-QKKDVTAWNILLTGYAQQGQAKLAVELFDKMLELEIHPDEITFISL 606

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L ACS +G+++EG ++F  M +++ +   ++HYAC+VD+LGR+G L +A +FI+ MP+  
Sbjct: 607 LCACSKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGRAGQLDDAYDFIQDMPIRP 666

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  +W   L ACR+H + ELG+ AA+ + E+D +    +ILL NLYA  G+W+ V+ +R 
Sbjct: 667 DAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVGYYILLCNLYAGCGNWDKVSKVRS 726

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M+ER L  + GCSW+E   KVH F  G+ SH ++ EI   LD    K+KE G+    + 
Sbjct: 727 LMRERGLSADPGCSWVEIKGKVHAFLSGDNSHSQSKEINGVLDGFCSKMKENGFGNLKSS 786

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
              E+ E  +      HSE+ A+AFGLI+T+   PI V KNL +C  CH  +K+IS +  
Sbjct: 787 FTSEI-ESSRADIFCGHSERQAIAFGLINTAPGMPIWVTKNLYMCHSCHNMVKFISTIVR 845

Query: 837 REIVLRDSNRFHHIKDGKCSCND--YW 861
           REI +RD   +HH KDG CSC D  YW
Sbjct: 846 REISVRDVEEYHHFKDGVCSCGDEGYW 872



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 239/509 (46%), Gaps = 55/509 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   + +    +M +    PDL T + +  +C    N  LG+ VH  + +S+   +
Sbjct: 274 YFENGGGLEGLELFSMMRELSVDPDLITMTTVASACELLDNERLGRGVHGYVVKSEFGGD 333

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSLI +YS  G L EA  +F  M +K D+VSW++MI+S V+      A+  + +M+
Sbjct: 334 ISMNNSLIQMYSSLGRLEEAETVFSRMESK-DVVSWTAMIASLVSHKLPFKAVETY-KMM 391

Query: 173 EL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           EL G  P+E    +V+ AC+   ++ +G  ++   +K G   S V V  +LIDM+ K   
Sbjct: 392 ELEGILPDEITLVSVLSACACIGHLDLGIRLHEIAIKTGLV-SHVIVSNSLIDMYSKCKC 450

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +++A +VF  ++ KN V WT +I          +A+ LF   +     P+  TL  V+S
Sbjct: 451 -VDNALEVFRNISGKNVVSWTSLILGLRINNRSFEAL-LFFRQMKESMKPNSVTLISVLS 508

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ +     GK++H+ A+RTG+  D  +  +++DMY +C   G    +   F+     +
Sbjct: 509 ACARIGALMRGKEIHAHALRTGVGFDGFLPNAILDMYVRC---GRKVPALNQFNSQ-KKD 564

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V +W  ++TGY Q  G+ K AV+LF  M++ ++ P+  TF S+L AC             
Sbjct: 565 VTAWNILLTGYAQQ-GQAKLAVELFDKMLELEIHPDEITFISLLCAC------------- 610

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-----NLVSYNTMVDAYAK 466
                                 ++SG + +  + F  +  K     NL  Y  +VD   +
Sbjct: 611 ----------------------SKSGMVTEGLEYFNIMKNKYNLTPNLKHYACVVDILGR 648

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
               + A++    I+D  +   A  + +LL+       +  GE    R+ +   +S    
Sbjct: 649 AGQLDDAYDF---IQDMPIRPDAAIWGALLNACRIHRNVELGEIAAKRVFEKDNKSVG-Y 704

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNV 555
           Y  L ++Y+ C N +   +V   M +R +
Sbjct: 705 YILLCNLYAGCGNWDKVSKVRSLMRERGL 733


>gi|449497589|ref|XP_004160443.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  488 bits (1255), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 261/748 (34%), Positives = 431/748 (57%), Gaps = 60/748 (8%)

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----------GFCPNEY--CFSAVIRACS 191
           DIV W+  IS+Y+ +G+   A+ +F  M             G+  N    C   V     
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMP 118

Query: 192 NTENVAIGHIIYGFLLKCGYF-----------DSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + + ++   ++ G+ +K G             + DV    A++  F +    +E A K+F
Sbjct: 119 DRDLISWNVMLSGY-VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGF-VEEARKIF 176

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+M  KN + W  +++   Q G   DA RLF   +    +     + G V    +  L  
Sbjct: 177 DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYV---RKKRLDD 233

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           +        +R  ++ ++     ++  YA+   +G + ++R++F+ +   +V +WTA+++
Sbjct: 234 ARSLFDRMPVRDKISWNI-----MITGYAQ---NGLLSEARRLFEELPIRDVFAWTAMVS 285

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G+VQ+G  D EA ++F +M +     N  ++ ++           +A  V +  +++ R 
Sbjct: 286 GFVQNGMLD-EATRIFEEMPE----KNEVSWNAM-----------IAGYVQSQQIEKARE 329

Query: 421 LDDCV-------GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           L D +        N++++ YA+ G ++ A+  F+ + +++ +S+  M+  YA++  SE+A
Sbjct: 330 LFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEA 389

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L  +++  G   +    A  LS  + I A+  G+Q+H R++K+GF++ +   NAL++M
Sbjct: 390 LHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAM 449

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y +C ++E AF VF+++ +++++SW +MI G+A+HGF   AL +F  M    IKP+ +T 
Sbjct: 450 YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTL 508

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           + VLSACSH GL+ +G ++F SMY  +GI    +HY CM+DLLGR+G L EAL  ++SMP
Sbjct: 509 VGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
              D   W   LGA R+HGDTELG+ AAE + E +P +   ++LLSNLYA++G W  V  
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +R +M+++ + K  G SW+E  NK H F VG+ SHP+   IYA L++L L++K+ G++  
Sbjct: 629 MRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSS 688

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
           T  VLH++EEE+K   L  HSEK+AVAFG++S    +PIRV KNLRVC DCH AIK+IS 
Sbjct: 689 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISK 748

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T R+I++RDSNRFHH  +G CSC DYW
Sbjct: 749 ITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 248/560 (44%), Gaps = 75/560 (13%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++V  N++IS Y      + A K+F+ M + RD++SW+ M+S YV  G    A  +F +M
Sbjct: 90  STVTYNAMISGYLSNNKFDCARKVFEKMPD-RDLISWNVMLSGYVKNGNLSAARALFNQM 148

Query: 172 LEL----------GFCPNEYC------FSAVIRACSNTEN------VAIGHIIYGFLLKC 209
            E           GF  N +       F  ++     + N      V  G I     L  
Sbjct: 149 PEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFD 208

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
              D ++     L+  +V+    L+ A  +FD+M  ++ + W +MIT   Q G   +A R
Sbjct: 209 SKMDWEIVSWNCLMGGYVRKK-RLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267

Query: 270 LFLDM----------ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW-AIRTGL---- 314
           LF ++          ++SGF+ +     G++   + +      K   SW A+  G     
Sbjct: 268 LFEELPIRDVFAWTAMVSGFVQN-----GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQ 322

Query: 315 -------------ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
                        + +     ++V  YA+C   G++D ++ +FD M   + +SW A+I+G
Sbjct: 323 QIEKARELFDQMPSRNTSSWNTMVTGYAQC---GNIDQAKILFDEMPQRDCISWAAMISG 379

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y QS G+ +EA+ LF  M +     N    A  L +C  +    + +Q++   VK G   
Sbjct: 380 YAQS-GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQT 438

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
               GN+L++MY + G +E+A   FE + EK++VS+NTM+  YA++   ++A  L   ++
Sbjct: 439 GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK 498

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANV 540
            T +     T   +LS  S  G + KG E  ++     G  +N   Y  +I +  R   +
Sbjct: 499 MT-IKPDDVTLVGVLSACSHTGLVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRL 557

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAV 596
           + A  + K M    +  +W +++     HG      +A E  ++M  D    N   Y+ +
Sbjct: 558 DEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD----NSGMYVLL 613

Query: 597 LSACSHAGLISEGWKHFRSM 616
            +  + +G     W+  R M
Sbjct: 614 SNLYAASGR----WREVREM 629



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 218/457 (47%), Gaps = 39/457 (8%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR++ A    D         ++ +++ L+   +R +     +   SL  R  +  +
Sbjct: 194 YVQNGRIEDARRLFDSKMD----WEIVSWNCLMGGYVRKKRLDDAR---SLFDRMPVR-D 245

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            +  N +I+ Y++ G L+EA ++F+ +   RD+ +W++M+S +V  G   +A  +F EM 
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEEL-PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP 304

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV- 231
           E     NE  ++A+I     ++ +     +         FD       +  +  V G   
Sbjct: 305 E----KNEVSWNAMIAGYVQSQQIEKAREL---------FDQMPSRNTSSWNTMVTGYAQ 351

Query: 232 --DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             +++ A  +FD+M +++ + W  MI+   Q G   +A+ LF+ M   G + +R  L+  
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACA 411

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +S+C+E+     GKQLH   ++ G       G +L+ MY KC   GS++++  VF+ + +
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC---GSIEEAFDVFEDITE 468

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVA 407
            +++SW  +I GY +  G  KEA+ LF  M +  + P+  T   VL AC +  L+D  + 
Sbjct: 469 KDIVSWNTMIAGYARH-GFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGLVDKGM- 525

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--- 463
           E   +     G   +      +I +  R+GR+++A    +S+ F  +  ++  ++ A   
Sbjct: 526 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 585

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +      EKA E + E+E    G   Y   S L  AS
Sbjct: 586 HGDTELGEKAAEKVFEMEPDNSGM--YVLLSNLYAAS 620


>gi|297602077|ref|NP_001052059.2| Os04g0118700 [Oryza sativa Japonica Group]
 gi|222628272|gb|EEE60404.1| hypothetical protein OsJ_13579 [Oryza sativa Japonica Group]
 gi|255675134|dbj|BAF13973.2| Os04g0118700 [Oryza sativa Japonica Group]
          Length = 856

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 289/826 (34%), Positives = 459/826 (55%), Gaps = 26/826 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKL--EPN 112
           G    A+  L  +T       LD  +L   +KS    R+    + +H+   R  L   P+
Sbjct: 36  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 95

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
             + N+L++ Y++CG L  A ++F S+ +   D VS++S+IS+     +   A+     M
Sbjct: 96  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 155

Query: 172 LELGFCPNEYCFSAVIRACSNTENVA----IGHIIYGFLLKCGYFDSDVCVGC-ALIDMF 226
           L  G     +   +V+RA S+    A    +G   + F LK G           AL+ M+
Sbjct: 156 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 215

Query: 227 VKGSVDLESAYKVFDKMT--EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            +  + +  A ++F   T    + V W  M++   Q G   +A++   DM+  G  PD  
Sbjct: 216 ARLGL-VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 274

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           T +  + ACS LEL   G+++H++ I+   LA +  V  +LVDMYA       V  +R+V
Sbjct: 275 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYA---THEQVGKARQV 331

Query: 344 FDRMLD--HNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGN 400
           FD + D    +  W A+I GY Q+G  D+EA++LF+ M  +    P   T ASVL AC  
Sbjct: 332 FDMVPDSGKQLGMWNAMICGYAQAG-MDEEALRLFARMEAEAGFVPCETTMASVLPACAR 390

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                  E V+ + VKRG A +  V N+L+ MYAR G+ + AR+ F  +   ++VS+NT+
Sbjct: 391 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 450

Query: 461 VDAYAKNLNSEKAFEL---LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           +       +   AF+L   + ++E+ GV  +A T  +LL G + + A  +G++IH   ++
Sbjct: 451 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR 510

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
              +++  + +AL+ MY++C  +  +  VF  +  RN I+W  +I  +  HG    A  +
Sbjct: 511 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 570

Query: 578 FYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           F +M A G  +PN +T++A L+ACSH+G++  G + F +M  +HG+    +  AC+VD+L
Sbjct: 571 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 630

Query: 637 GRSGSLTEALEFIRSMPLS-ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           GR+G L EA   + SM      V  W T LGACR+H +  LG+ A E +LE +P++ + +
Sbjct: 631 GRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 690

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           +LL N+Y++AG W   A +R RM+ R + KE GCSWIE D  +H+F  GE++HP + E++
Sbjct: 691 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 750

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVF 815
           A ++ L  ++   GY PDT+ VLH++++  K   L  HSEK+A+AFGL+  +    IRV 
Sbjct: 751 AHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVA 810

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KNLRVC DCH A K++S + GREIVLRD  RFHH ++G+CSC DYW
Sbjct: 811 KNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 856


>gi|38344863|emb|CAE01289.2| OSJNBa0020P07.6 [Oryza sativa Japonica Group]
          Length = 854

 Score =  487 bits (1254), Expect = e-135,   Method: Compositional matrix adjust.
 Identities = 289/826 (34%), Positives = 459/826 (55%), Gaps = 26/826 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKL--EPN 112
           G    A+  L  +T       LD  +L   +KS    R+    + +H+   R  L   P+
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
             + N+L++ Y++CG L  A ++F S+ +   D VS++S+IS+     +   A+     M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 172 LELGFCPNEYCFSAVIRACSNTENVA----IGHIIYGFLLKCGYFDSDVCVGC-ALIDMF 226
           L  G     +   +V+RA S+    A    +G   + F LK G           AL+ M+
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213

Query: 227 VKGSVDLESAYKVFDKMT--EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            +  + +  A ++F   T    + V W  M++   Q G   +A++   DM+  G  PD  
Sbjct: 214 ARLGL-VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           T +  + ACS LEL   G+++H++ I+   LA +  V  +LVDMYA       V  +R+V
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYA---THEQVGKARQV 329

Query: 344 FDRMLD--HNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGN 400
           FD + D    +  W A+I GY Q+G  D+EA++LF+ M  +    P   T ASVL AC  
Sbjct: 330 FDMVPDSGKQLGMWNAMICGYAQAG-MDEEALRLFARMEAEAGFVPCETTMASVLPACAR 388

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                  E V+ + VKRG A +  V N+L+ MYAR G+ + AR+ F  +   ++VS+NT+
Sbjct: 389 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 448

Query: 461 VDAYAKNLNSEKAFEL---LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           +       +   AF+L   + ++E+ GV  +A T  +LL G + + A  +G++IH   ++
Sbjct: 449 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR 508

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
              +++  + +AL+ MY++C  +  +  VF  +  RN I+W  +I  +  HG    A  +
Sbjct: 509 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 568

Query: 578 FYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           F +M A G  +PN +T++A L+ACSH+G++  G + F +M  +HG+    +  AC+VD+L
Sbjct: 569 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 628

Query: 637 GRSGSLTEALEFIRSMPLS-ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           GR+G L EA   + SM      V  W T LGACR+H +  LG+ A E +LE +P++ + +
Sbjct: 629 GRAGRLDEAYAMVTSMETGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 688

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           +LL N+Y++AG W   A +R RM+ R + KE GCSWIE D  +H+F  GE++HP + E++
Sbjct: 689 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 748

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVF 815
           A ++ L  ++   GY PDT+ VLH++++  K   L  HSEK+A+AFGL+  +    IRV 
Sbjct: 749 AHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVA 808

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KNLRVC DCH A K++S + GREIVLRD  RFHH ++G+CSC DYW
Sbjct: 809 KNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854


>gi|116308873|emb|CAH66009.1| H0613H07.7 [Oryza sativa Indica Group]
 gi|116317921|emb|CAH65944.1| H0716A07.2 [Oryza sativa Indica Group]
          Length = 854

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 289/826 (34%), Positives = 459/826 (55%), Gaps = 26/826 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKL--EPN 112
           G    A+  L  +T       LD  +L   +KS    R+    + +H+   R  L   P+
Sbjct: 34  GNHAAALRALSSITMASPQQQLDHSALPPAIKSAAALRDARSARAIHAAALRRGLLHRPS 93

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
             + N+L++ Y++CG L  A ++F S+ +   D VS++S+IS+     +   A+     M
Sbjct: 94  PAVANALLTAYARCGRLAAALEVFGSISDSAHDAVSFNSLISALCLFRRWDHALAALRAM 153

Query: 172 LELGFCPNEYCFSAVIRACSNTENVA----IGHIIYGFLLKCGYFDSDVCVGC-ALIDMF 226
           L  G     +   +V+RA S+    A    +G   + F LK G           AL+ M+
Sbjct: 154 LAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSMY 213

Query: 227 VKGSVDLESAYKVFDKMT--EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            +  + +  A ++F   T    + V W  M++   Q G   +A++   DM+  G  PD  
Sbjct: 214 ARLGL-VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 272

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           T +  + ACS LEL   G+++H++ I+   LA +  V  +LVDMYA       V  +R+V
Sbjct: 273 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYA---THEQVGKARQV 329

Query: 344 FDRMLD--HNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGN 400
           FD + D    +  W A+I GY Q+G  D+EA++LF+ M  +    P   T ASVL AC  
Sbjct: 330 FDMVPDSGKQLGMWNAMICGYAQAG-MDEEALRLFARMEAEAGFVPCETTMASVLPACAR 388

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                  E V+ + VKRG A +  V N+L+ MYAR G+ + AR+ F  +   ++VS+NT+
Sbjct: 389 SEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNTL 448

Query: 461 VDAYAKNLNSEKAFEL---LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           +       +   AF+L   + ++E+ GV  +A T  +LL G + + A  +G++IH   ++
Sbjct: 449 ITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAVR 508

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
              +++  + +AL+ MY++C  +  +  VF  +  RN I+W  +I  +  HG    A  +
Sbjct: 509 HALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATVL 568

Query: 578 FYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           F +M A G  +PN +T++A L+ACSH+G++  G + F +M  +HG+    +  AC+VD+L
Sbjct: 569 FDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDIL 628

Query: 637 GRSGSLTEALEFIRSMPLS-ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           GR+G L EA   + SM      V  W T LGACR+H +  LG+ A E +LE +P++ + +
Sbjct: 629 GRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASHY 688

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           +LL N+Y++AG W   A +R RM+ R + KE GCSWIE D  +H+F  GE++HP + E++
Sbjct: 689 VLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEVH 748

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVF 815
           A ++ L  ++   GY PDT+ VLH++++  K   L  HSEK+A+AFGL+  +    IRV 
Sbjct: 749 AHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRVA 808

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KNLRVC DCH A K++S + GREIVLRD  RFHH ++G+CSC DYW
Sbjct: 809 KNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 854


>gi|225447423|ref|XP_002276196.1| PREDICTED: pentatricopeptide repeat-containing protein At3g12770
           [Vitis vinifera]
 gi|296081235|emb|CBI17979.3| unnamed protein product [Vitis vinifera]
          Length = 742

 Score =  487 bits (1254), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 252/643 (39%), Positives = 389/643 (60%), Gaps = 8/643 (1%)

Query: 222 LIDMFVKGSVDLES---AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
           L+  FV  S ++     A KVFD+  E +   W  +I   +      DAI ++  M  SG
Sbjct: 105 LVTKFVNASWNIGEIGYARKVFDEFPEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASG 164

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD FTL  V+ ACS + +   GK++H    R G   DV V   LV +YAKC   G V+
Sbjct: 165 VNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVALYAKC---GRVE 221

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +R VF+ + D N++SWT++I+GY Q+G    EA+++F  M Q  V P+     SVL+A 
Sbjct: 222 QARIVFEGLDDRNIVSWTSMISGYGQNG-LPMEALRIFGQMRQRNVKPDWIALVSVLRAY 280

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            ++ D    + ++   VK G   +  +  SL +MYA+ G++  AR  F+ +   N++ +N
Sbjct: 281 TDVEDLEQGKSIHGCVVKMGLEFEPDLLISLTAMYAKCGQVMVARSFFDQMEIPNVMMWN 340

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  YAKN  + +A  L  E+    + T + T  S +   + +G++   + +   I K+
Sbjct: 341 AMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKT 400

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
            + ++  +  ALI M+++C +V+ A +VF    D++V+ W++MI G+  HG    A+++F
Sbjct: 401 EYRNDVFVNTALIDMFAKCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLF 460

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
           Y M   G+ PN +T++ +L+AC+H+GL+ EGW+ F SM   +GI  R +HYAC+VDLLGR
Sbjct: 461 YAMKQAGVCPNDVTFVGLLTACNHSGLVEEGWELFHSM-KYYGIEARHQHYACVVDLLGR 519

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           SG L EA +FI +MP+   V VW   LGAC+++    LG++AAE +   DP +   ++ L
Sbjct: 520 SGHLNEAYDFITTMPIEPGVSVWGALLGACKIYRHVTLGEYAAEQLFSLDPFNTGHYVQL 579

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SNLYAS+  W+ VA +R  M+E+ L K+ G S IE + K+  F VG+ SHP+  EI+ EL
Sbjct: 580 SNLYASSRLWDSVAKVRILMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEEL 639

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
           + L  ++KE G++P    VLH+L +E+K + L  HSE++A+A+GLIST+    +R+ KNL
Sbjct: 640 ESLERRLKEAGFIPHIESVLHDLNQEEKEETLCNHSERLAIAYGLISTAPGTTLRITKNL 699

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R C +CH+A K IS +  REIV+RD+NRFHH K+G CSC DYW
Sbjct: 700 RACINCHSATKLISKLVNREIVVRDANRFHHFKNGVCSCRDYW 742



 Score =  205 bits (522), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 138/489 (28%), Positives = 244/489 (49%), Gaps = 14/489 (2%)

Query: 77  DLDTY-SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           D D++ S LL   +  R  HL + +H+ L  S L  +  ++   ++     G++  A K+
Sbjct: 69  DFDSFFSSLLDHSVHKR--HLNQ-IHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKV 125

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F     +  +  W+++I  Y +     DAI M+  M   G  P+ +    V++ACS    
Sbjct: 126 FDEF-PEPSVFLWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPV 184

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           + +G  ++G + + G F+SDV V   L+ ++ K G V  E A  VF+ + ++N V WT M
Sbjct: 185 LEVGKRVHGQIFRLG-FESDVFVQNGLVALYAKCGRV--EQARIVFEGLDDRNIVSWTSM 241

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+   Q G P +A+R+F  M      PD   L  V+ A +++E    GK +H   ++ GL
Sbjct: 242 ISGYGQNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGL 301

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             +  +  SL  MYAKC   G V  +R  FD+M   NVM W A+I+GY ++ G   EAV 
Sbjct: 302 EFEPDLLISLTAMYAKC---GQVMVARSFFDQMEIPNVMMWNAMISGYAKN-GYTNEAVG 357

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +MI   +  +  T  S + AC  +   ++A+ +  +  K     D  V  +LI M+A
Sbjct: 358 LFQEMISKNIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEYRNDVFVNTALIDMFA 417

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G ++ AR+ F+   +K++V ++ M+  Y  +   + A +L + ++  GV  +  TF  
Sbjct: 418 KCGSVDLAREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVG 477

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DR 553
           LL+  +  G + +G ++   +   G E+ H  Y  ++ +  R  ++  A+     M  + 
Sbjct: 478 LLTACNHSGLVEEGWELFHSMKYYGIEARHQHYACVVDLLGRSGHLNEAYDFITTMPIEP 537

Query: 554 NVISWTSMI 562
            V  W +++
Sbjct: 538 GVSVWGALL 546



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 186/339 (54%), Gaps = 11/339 (3%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           AI     M   G +PD  T   +LK+C       +GK VH  + R   E +  + N L++
Sbjct: 153 AIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQIFRLGFESDVFVQNGLVA 212

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           LY+KCG + +A  +F+ + + R+IVSW+SMIS Y   G  ++A+ +F +M +    P+  
Sbjct: 213 LYAKCGRVEQARIVFEGL-DDRNIVSWTSMISGYGQNGLPMEALRIFGQMRQRNVKPDWI 271

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVK-GSVDLESAYKV 239
              +V+RA ++ E++  G  I+G ++K G  F+ D+ +  +L  M+ K G V +  ++  
Sbjct: 272 ALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPDLLI--SLTAMYAKCGQVMVARSF-- 327

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FD+M   N + W  MI+   + G   +A+ LF +MI      D  T+   + AC+++   
Sbjct: 328 FDQMEIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISKNIRTDSITVRSAILACAQVGSL 387

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
              K +  +  +T    DV V  +L+DM+AKC   GSVD +R+VFDR LD +V+ W+A+I
Sbjct: 388 DLAKWMGDYINKTEYRNDVFVNTALIDMFAKC---GSVDLAREVFDRTLDKDVVVWSAMI 444

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            GY    GR ++A+ LF  M Q  V PN  TF  +L AC
Sbjct: 445 VGYGLH-GRGQDAIDLFYAMKQAGVCPNDVTFVGLLTAC 482



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/285 (25%), Positives = 142/285 (49%), Gaps = 18/285 (6%)

Query: 400 NLLDSNVAE----QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           +LLD +V +    Q++   V  G      +    ++     G +  ARK F+   E ++ 
Sbjct: 76  SLLDHSVHKRHLNQIHAQLVVSGLVESGFLVTKFVNASWNIGEIGYARKVFDEFPEPSVF 135

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            +N ++  Y+ +     A E+   ++ +GV    +T   +L   S +  +  G+++H +I
Sbjct: 136 LWNAIIRGYSSHNFFGDAIEMYSRMQASGVNPDGFTLPCVLKACSGVPVLEVGKRVHGQI 195

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
            + GFES+  + N L+++Y++C  VE A  VF+ ++DRN++SWTSMI+G+ ++G    AL
Sbjct: 196 FRLGFESDVFVQNGLVALYAKCGRVEQARIVFEGLDDRNIVSWTSMISGYGQNGLPMEAL 255

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM------EHY 629
            IF +M    +KP+ I  ++VL A +    + +G    +S+   HG V +M      +  
Sbjct: 256 RIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQG----KSI---HGCVVKMGLEFEPDLL 308

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
             +  +  + G +  A  F   M +  +V++W   +     +G T
Sbjct: 309 ISLTAMYAKCGQVMVARSFFDQMEI-PNVMMWNAMISGYAKNGYT 352



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 186/407 (45%), Gaps = 24/407 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M Q+   PD      +L++     +   GK +H  + +  LE    
Sbjct: 247 QNGLPMEALRIFGQMRQRNVKPDWIALVSVLRAYTDVEDLEQGKSIHGCVVKMGLEFEPD 306

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +L SL ++Y+KCG +  A   F  M    +++ W++MIS Y   G   +A+ +F EM+  
Sbjct: 307 LLISLTAMYAKCGQVMVARSFFDQM-EIPNVMMWNAMISGYAKNGYTNEAVGLFQEMISK 365

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
               +     + I AC+   ++ +   +  ++ K  Y  +DV V  ALIDMF K GSVDL
Sbjct: 366 NIRTDSITVRSAILACAQVGSLDLAKWMGDYINKTEY-RNDVFVNTALIDMFAKCGSVDL 424

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A +VFD+  +K+ V W+ MI      G  +DAI LF  M  +G  P+  T  G+++AC
Sbjct: 425 --AREVFDRTLDKDVVVWSAMIVGYGLHGRGQDAIDLFYAMKQAGVCPNDVTFVGLLTAC 482

Query: 294 SELELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHN 351
           +   L   G +L HS       A      C +VD+  +    G ++++      M ++  
Sbjct: 483 NHSGLVEEGWELFHSMKYYGIEARHQHYAC-VVDLLGR---SGHLNEAYDFITTMPIEPG 538

Query: 352 VMSWTAIITG---YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           V  W A++     Y      +  A +LFS          H+   S L A   L DS    
Sbjct: 539 VSVWGALLGACKIYRHVTLGEYAAEQLFS---LDPFNTGHYVQLSNLYASSRLWDSVAKV 595

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYAR--SGRMED-ARKAFESLFEK 452
           ++    + R + L   +G SLI +  +  + R+ D +   F+ +FE+
Sbjct: 596 RI----LMREKGLSKDLGYSLIEINGKLQAFRVGDKSHPRFKEIFEE 638


>gi|356564895|ref|XP_003550682.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Glycine max]
          Length = 778

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 273/781 (34%), Positives = 441/781 (56%), Gaps = 16/781 (2%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           +L+ K+C      HL +  H+ L R+  + +   +  L       G    A  +F S+  
Sbjct: 13  ALISKACTFP---HLAE-THAQLIRNGYQHDLATVTKLTQKLFDVGATRHARALFFSV-P 67

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENVAIGH 200
           K DI  ++ +I  + +      +I  +  +L+     P+ + ++  I A  +     +G 
Sbjct: 68  KPDIFLFNVLIKGF-SFSPDASSISFYTHLLKNTTLSPDNFTYAFAISASPDDN---LGM 123

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++   +  G FDS++ V  AL+D++ K S  +  A KVFDKM +++TV W  MIT   +
Sbjct: 124 CLHAHAVVDG-FDSNLFVASALVDLYCKFS-RVAYARKVFDKMPDRDTVLWNTMITGLVR 181

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
             C  D++++F DM+  G   D  T++ V+ A +E++    G  +   A++ G   D  V
Sbjct: 182 NCCYDDSVQVFKDMVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYV 241

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
              L+ +++KC     VD +R +F  +   +++S+ A+I+G+    G  + AVK F +++
Sbjct: 242 LTGLISVFSKCE---DVDTARLLFGMIRKPDLVSYNALISGF-SCNGETECAVKYFRELL 297

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
                 +  T   ++         ++A  +    VK G  L   V  +L ++Y+R   ++
Sbjct: 298 VSGQRVSSSTMVGLIPVSSPFGHLHLACCIQGFCVKSGTILQPSVSTALTTIYSRLNEID 357

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            AR+ F+   EK + ++N M+  YA++  +E A  L  E+  T    +  T  S+LS  +
Sbjct: 358 LARQLFDESSEKTVAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACA 417

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            +GA+  G+ +H  I     E N  +  ALI MY++C N+  A Q+F    ++N ++W +
Sbjct: 418 QLGALSFGKSVHQLIKSKNLEQNIYVSTALIDMYAKCGNISEASQLFDLTSEKNTVTWNT 477

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI G+  HG+   AL++F +ML  G +P+ +T+++VL ACSHAGL+ EG + F +M +++
Sbjct: 478 MIFGYGLHGYGDEALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKY 537

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I    EHYACMVD+LGR+G L +ALEFIR MP+     VW T LGAC +H DT L + A
Sbjct: 538 RIEPLAEHYACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVA 597

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           +E + E DP +   ++LLSN+Y+   ++   A++R+ +K+RNL K  GC+ IE +   H 
Sbjct: 598 SERLFELDPGNVGYYVLLSNIYSVERNFPKAASVREAVKKRNLSKTPGCTLIEVNGTPHV 657

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F  G+ SH +T  IYA+L++L  K++E GY  +T   LH++EEE+K      HSEK+A+A
Sbjct: 658 FVCGDRSHSQTTSIYAKLEELTGKMREMGYQSETVTALHDVEEEEKELMFNVHSEKLAIA 717

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLI+T     IR+ KNLRVC DCH A K+IS +T R IV+RD+NRFHH KDG CSC DY
Sbjct: 718 FGLITTEPGTEIRIIKNLRVCLDCHAATKFISKITERVIVVRDANRFHHFKDGICSCGDY 777

Query: 861 W 861
           W
Sbjct: 778 W 778



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 206/419 (49%), Gaps = 20/419 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G   D  T + +L +    +   +G  +  L  +     +  +L  LIS++SKC D
Sbjct: 195 MVAQGVRLDSTTVATVLPAVAEMQEVKVGMGIQCLALKLGFHFDDYVLTGLISVFSKCED 254

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           ++ A  +F  M  K D+VS++++IS +   G+   A+  F E+L  G   +      +I 
Sbjct: 255 VDTARLLF-GMIRKPDLVSYNALISGFSCNGETECAVKYFRELLVSGQRVSSSTMVGLIP 313

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
             S   ++ +   I GF +K G       V  AL  ++ +   +DL  A ++FD+ +EK 
Sbjct: 314 VSSPFGHLHLACCIQGFCVKSGTILQP-SVSTALTTIYSRLNEIDL--ARQLFDESSEKT 370

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
              W  MI+   Q G    AI LF +M+ + F P+  T++ ++SAC++L   + GK +H 
Sbjct: 371 VAAWNAMISGYAQSGLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQ 430

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
                 L  ++ V  +L+DMYAKC   G++ ++ ++FD   + N ++W  +I GY   G 
Sbjct: 431 LIKSKNLEQNIYVSTALIDMYAKC---GNISEASQLFDLTSEKNTVTWNTMIFGYGLHGY 487

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            D EA+KLF++M+     P+  TF SVL AC +       ++++ HA+     ++    +
Sbjct: 488 GD-EALKLFNEMLHLGFQPSSVTFLSVLYACSHAGLVREGDEIF-HAMVNKYRIEPLAEH 545

Query: 428 --SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMV-------DAYAKNLNSEKAFEL 476
              ++ +  R+G++E A +    +  E     + T++       D     + SE+ FEL
Sbjct: 546 YACMVDILGRAGQLEKALEFIRKMPVEPGPAVWGTLLGACMIHKDTNLARVASERLFEL 604



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  + AI     M      P+  T + +L +C +      GK VH L+    LE N  + 
Sbjct: 385 GLTEMAISLFQEMMTTEFTPNPVTITSILSACAQLGALSFGKSVHQLIKSKNLEQNIYVS 444

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +LI +Y+KCG+++EA+++F  + ++++ V+W++MI  Y   G   +A+ +F EML LGF
Sbjct: 445 TALIDMYAKCGNISEASQLF-DLTSEKNTVTWNTMIFGYGLHGYGDEALKLFNEMLHLGF 503

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+   F +V+ ACS+   V  G  I+  ++     +        ++D+  +    LE A
Sbjct: 504 QPSSVTFLSVLYACSHAGLVREGDEIFHAMVNKYRIEPLAEHYACMVDILGRAG-QLEKA 562

Query: 237 YKVFDKM-TEKNTVGWTLMITRC 258
            +   KM  E     W  ++  C
Sbjct: 563 LEFIRKMPVEPGPAVWGTLLGAC 585


>gi|296088174|emb|CBI35666.3| unnamed protein product [Vitis vinifera]
          Length = 762

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/718 (36%), Positives = 407/718 (56%), Gaps = 26/718 (3%)

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           S   +GK  +A     EM +       + +  +  AC    ++A G +I+  L +     
Sbjct: 61  SLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNP 120

Query: 214 SDVCVGCALIDMFVK-GS-VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           S     C L+ M+   GS +D++   KVFD+M  KN V W ++I+   + G    AIRLF
Sbjct: 121 SGSIENC-LLRMYCDCGSCIDVQ---KVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLF 176

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            DM  SG  P+      ++ +C        GKQ+HS  IR  L  ++ V  ++ +MY +C
Sbjct: 177 SDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQIHSHVIRAQLNANITVETAICNMYVRC 236

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G ++ ++ VFD M   N ++WT ++ GY Q+  + + A++LF+ M    V  + F F
Sbjct: 237 ---GWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK-KLEVALELFARMAMEGVELDEFVF 292

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           + VLK C  L D ++  Q+++H VK G   +  VG  L+  Y + G +E A ++F  + E
Sbjct: 293 SIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGTPLVDFYVKCGDIESAYRSFGRISE 352

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            N VS++ ++  ++++   E   ++   +   GV  +++ + S+    ++   +  G Q 
Sbjct: 353 PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQA 412

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   IK G  S     +A+++MYS+C  ++ A + F+ +++ + ++WT++I+G+A HG A
Sbjct: 413 HGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNA 472

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
           A AL  F +M + G++PN +T+IAVL+ACSH+GL++E  ++  SM  ++G+   ++HY C
Sbjct: 473 AEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDC 532

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           M+D   R+G L EALE I  MP   D + W++ LG C  H D +LGK AAE +   DP D
Sbjct: 533 MIDTYSRAGLLQEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGD 592

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
            A +ILL NLY++ G WE   ++RK M ER L KE  CSWI    +VH+F VG+  HP+T
Sbjct: 593 TAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVHRFVVGDRHHPQT 652

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV--------QYLFQHSEKIAVAFGL 803
             IY++L++    +         +  +  L EE  V        + L  HSEK+A+AFGL
Sbjct: 653 EAIYSKLEEFKCSV--------IDSPVRLLNEEDDVSCSLSARKEQLLDHSEKLAIAFGL 704

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IST  + PI VFKNLR C DCH   K +SMVTGR+IV+RDS RFHH K GKCSCNDYW
Sbjct: 705 ISTEDNAPILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 762



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 283/548 (51%), Gaps = 9/548 (1%)

Query: 23  PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           PS  +L  SSS     +    +  +  L+     G++++A   L  M          +Y 
Sbjct: 32  PSWVSLKRSSSTIKTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQ 91

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            L ++C + R+   G+L+H  L R+   P+  I N L+ +Y  CG   +  K+F  M  K
Sbjct: 92  CLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMK 151

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
            ++VSW  +IS+Y   G+   AI +F +M   G  PN   + +++++C     + +G  I
Sbjct: 152 -NLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQI 210

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  +++    ++++ V  A+ +M+V+    LE A  VFD M  +N V WT ++   TQ  
Sbjct: 211 HSHVIR-AQLNANITVETAICNMYVRCGW-LEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
               A+ LF  M + G   D F  S V+  C  LE +  G+Q+HS  ++ G   +V VG 
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCGLEDWDMGRQIHSHIVKLGAESEVSVGT 328

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
            LVD Y KC   G ++ + + F R+ + N +SW+A+I+G+ QS GR ++ +K+F+ +   
Sbjct: 329 PLVDFYVKC---GDIESAYRSFGRISEPNDVSWSALISGFSQS-GRLEDCIKIFTSLRSE 384

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V  N F + SV +AC    + N+  Q +  A+KRG        +++++MY++ GR++ A
Sbjct: 385 GVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYA 444

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R+AFES+ E + V++  ++  YA + N+ +A      ++  GV  +A TF ++L+  S  
Sbjct: 445 RRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS 504

Query: 503 GAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTS 560
           G + + +Q    + +  G +     Y+ +I  YSR   ++ A ++   M  + + +SW S
Sbjct: 505 GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLQEALELINRMPFEPDAMSWKS 564

Query: 561 MITGFAKH 568
           ++ G   H
Sbjct: 565 LLGGCWAH 572



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 77/143 (53%)

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N  + + +K    ++A + L E++D  V  + +++  L      + ++  G  IH R+ +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +    +  I N L+ MY  C +     +VF EM  +N++SW  +I+ +AK+G   +A+ +
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSCIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 578 FYKMLADGIKPNGITYIAVLSAC 600
           F  M A GI+PN   Y+++L +C
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSC 198


>gi|224141765|ref|XP_002324235.1| predicted protein [Populus trichocarpa]
 gi|222865669|gb|EEF02800.1| predicted protein [Populus trichocarpa]
          Length = 736

 Score =  487 bits (1253), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 246/661 (37%), Positives = 390/661 (59%), Gaps = 32/661 (4%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DL  A  +F  +   N V W  MI   +    P  A+  ++ MI SG  P+ +T   +  
Sbjct: 77  DLSYALSLFKTIRNPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFK 136

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK--------------------- 330
           +C+++     GKQ+H+  ++ GL  +  V  SL++MYA+                     
Sbjct: 137 SCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVS 196

Query: 331 -------CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                      G +D++R++FD +   +V+SW A+I+GY QSG R +EA+  F +M + +
Sbjct: 197 FTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSG-RVEEAMAFFEEMRRAK 255

Query: 384 VAPNHFTFASVLKACGNLLDS-NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           V PN  T  SVL AC     S  +   V +    RG   +  + N LI MY + G +E+A
Sbjct: 256 VTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEA 315

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              FE + +KN+VS+N M+  Y      ++A  L   +  + +  +  TF S+L   +++
Sbjct: 316 SNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANL 375

Query: 503 GAIGKGEQIHARIIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           GA+  G+ +HA + K+    ++   ++ +LI MY++C ++  A ++F  M  +++ +W +
Sbjct: 376 GALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLATWNA 435

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI+GFA HG    AL +F +M ++G  P+ IT++ VL+AC HAGL+S G ++F SM  ++
Sbjct: 436 MISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSMIQDY 495

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            +  ++ HY CM+DL GR+G   EA   +++M +  D  +W + LGACR+H   EL +  
Sbjct: 496 KVSPKLPHYGCMIDLFGRAGLFDEAETLVKNMEMKPDGAIWCSLLGACRIHRRIELAESV 555

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ + E +P++P+A++LLSN+YA AG WE VA IR R+ +  + K  GCS IE D+ VH+
Sbjct: 556 AKHLFELEPENPSAYVLLSNIYAGAGRWEDVAKIRTRLNDNRMKKVPGCSSIEVDSVVHE 615

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F VG+  HP++ EIY  LD++ +++++ G++PDT+ VL++++EE K   L  HSEK+A+A
Sbjct: 616 FLVGDKVHPQSNEIYKMLDEIDMRLEKAGFVPDTSEVLYDMDEEWKEGVLSHHSEKLAIA 675

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLIST     IR+ KNLRVCG+CH+A K IS +  REI+ RD NRFHH KDG CSC DY
Sbjct: 676 FGLISTKPGTTIRIMKNLRVCGNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCKDY 735

Query: 861 W 861
           W
Sbjct: 736 W 736



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 139/517 (26%), Positives = 243/517 (47%), Gaps = 55/517 (10%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL--YSKCGDLNE 131
           +HP L     LL +C   +     K +HS + ++ L      L+ LI     S  GDL+ 
Sbjct: 28  DHPSLT----LLSNC---KTLQTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSY 80

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A  +FK++ N   ++ W+ MI    +      A+  +V M+  G  PNEY F ++ ++C+
Sbjct: 81  ALSLFKTIRNPNHVI-WNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCT 139

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM-------------FVKGSVD------ 232
                  G  ++  +LK G  + +  V  +LI+M             F K S+       
Sbjct: 140 KIRGAHEGKQVHAHVLKLG-LEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFT 198

Query: 233 -----------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
                      L+ A ++FD++  ++ V W  MI+   Q G   +A+  F +M  +   P
Sbjct: 199 ALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTP 258

Query: 282 DRFTLSGVVSAC----SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           +  T+  V+SAC    S L+L   G  + SW    GL  ++ +   L+DMY KC   G +
Sbjct: 259 NVSTMLSVLSACAQSGSSLQL---GNWVRSWIEDRGLGSNIRLVNGLIDMYVKC---GDL 312

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +++  +F+++ D NV+SW  +I GY       KEA+ LF  M+Q  + PN  TF S+L A
Sbjct: 313 EEASNLFEKIQDKNVVSWNVMIGGYTHMSCY-KEALGLFRRMMQSNIDPNDVTFLSILPA 371

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESLFEKNLV 455
           C NL   ++ + V+ +  K  +++ + V    SLI MYA+ G +  A++ F+ +  K+L 
Sbjct: 372 CANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMNTKSLA 431

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           ++N M+  +A + +++ A  L   +   G      TF  +L+     G +  G +  + +
Sbjct: 432 TWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACKHAGLLSLGRRYFSSM 491

Query: 516 IKSGFESNHCI-YNALISMYSRCANVEAAFQVFKEME 551
           I+    S     Y  +I ++ R    + A  + K ME
Sbjct: 492 IQDYKVSPKLPHYGCMIDLFGRAGLFDEAETLVKNME 528



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/363 (30%), Positives = 182/363 (50%), Gaps = 39/363 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  + KSC + R  H GK VH+ + +  LE N+ +  SLI++Y++ G+
Sbjct: 119 MISSGTEPNEYTFPSIFKSCTKIRGAHEGKQVHAHVLKLGLEHNAFVHTSLINMYAQNGE 178

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
           L  A  +F     +                              RD+VSW++MIS Y   
Sbjct: 179 LVNARLVFDKSSMRDAVSFTALITGYASKGFLDEARELFDEIPVRDVVSWNAMISGYAQS 238

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT-ENVAIGHIIYGFLLKCGYFDSDVC 217
           G+  +A+  F EM      PN     +V+ AC+ +  ++ +G+ +  ++   G   S++ 
Sbjct: 239 GRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRG-LGSNIR 297

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           +   LIDM+VK   DLE A  +F+K+ +KN V W +MI   T + C ++A+ LF  M+ S
Sbjct: 298 LVNGLIDMYVKCG-DLEEASNLFEKIQDKNVVSWNVMIGGYTHMSCYKEALGLFRRMMQS 356

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD--VCVGCSLVDMYAKCTVDG 335
              P+  T   ++ AC+ L     GK +H++  +   ++   V +  SL+DMYAKC   G
Sbjct: 357 NIDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKC---G 413

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            +  ++++FD M   ++ +W A+I+G+   G  D  A+ LFS M      P+  TF  VL
Sbjct: 414 DLAVAKRIFDCMNTKSLATWNAMISGFAMHGHTDT-ALGLFSRMTSEGFVPDDITFVGVL 472

Query: 396 KAC 398
            AC
Sbjct: 473 TAC 475



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 199/424 (46%), Gaps = 41/424 (9%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++S C  L+     KQ+HS  I+TGL  +     S +  +   +  G +  +  +F  + 
Sbjct: 34  LLSNCKTLQTL---KQIHSQIIKTGLH-NTHFALSKLIEFCAVSPHGDLSYALSLFKTIR 89

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + N + W  +I G + S      A++ +  MI     PN +TF S+ K+C  +  ++  +
Sbjct: 90  NPNHVIWNHMIRG-LSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGK 148

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGR------------------------------ 438
           QV+ H +K G   +  V  SLI+MYA++G                               
Sbjct: 149 QVHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKG 208

Query: 439 -MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            +++AR+ F+ +  +++VS+N M+  YA++   E+A     E+    V  +  T  S+LS
Sbjct: 209 FLDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLS 268

Query: 498 GASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
             +  G ++  G  + + I   G  SN  + N LI MY +C ++E A  +F++++D+NV+
Sbjct: 269 ACAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQDKNVV 328

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRS 615
           SW  MI G+        AL +F +M+   I PN +T++++L AC++ G +  G W H   
Sbjct: 329 SWNVMIGGYTHMSCYKEALGLFRRMMQSNIDPNDVTFLSILPACANLGALDLGKWVHAYV 388

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG--D 673
             +   +   +  +  ++D+  + G L  A      M  +  +  W   +    +HG  D
Sbjct: 389 DKNMKSMKNTVALWTSLIDMYAKCGDLAVAKRIFDCMN-TKSLATWNAMISGFAMHGHTD 447

Query: 674 TELG 677
           T LG
Sbjct: 448 TALG 451



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 80/257 (31%), Positives = 136/257 (52%), Gaps = 4/257 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVI 115
           GRV++A+   + M +    P++ T   +L +C +S  +  LG  V S +    L  N  +
Sbjct: 239 GRVEEAMAFFEEMRRAKVTPNVSTMLSVLSACAQSGSSLQLGNWVRSWIEDRGLGSNIRL 298

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
           +N LI +Y KCGDL EA+ +F+ + +K ++VSW+ MI  Y +     +A+ +F  M++  
Sbjct: 299 VNGLIDMYVKCGDLEEASNLFEKIQDK-NVVSWNVMIGGYTHMSCYKEALGLFRRMMQSN 357

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLE 234
             PN+  F +++ AC+N   + +G  ++ ++ K      + V +  +LIDM+ K   DL 
Sbjct: 358 IDPNDVTFLSILPACANLGALDLGKWVHAYVDKNMKSMKNTVALWTSLIDMYAKCG-DLA 416

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A ++FD M  K+   W  MI+     G    A+ LF  M   GF+PD  T  GV++AC 
Sbjct: 417 VAKRIFDCMNTKSLATWNAMISGFAMHGHTDTALGLFSRMTSEGFVPDDITFVGVLTACK 476

Query: 295 ELELFTSGKQLHSWAIR 311
              L + G++  S  I+
Sbjct: 477 HAGLLSLGRRYFSSMIQ 493



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/308 (23%), Positives = 136/308 (44%), Gaps = 37/308 (12%)

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS--GRMEDARKAFESLF 450
           ++L  C  L      +Q+++  +K G        + LI   A S  G +  A   F+++ 
Sbjct: 33  TLLSNCKTL---QTLKQIHSQIIKTGLHNTHFALSKLIEFCAVSPHGDLSYALSLFKTIR 89

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
             N V +N M+   + + +   A E    +  +G   + YTF S+    + I    +G+Q
Sbjct: 90  NPNHVIWNHMIRGLSSSESPFLALEYYVHMISSGTEPNEYTFPSIFKSCTKIRGAHEGKQ 149

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCAN------------------------------- 539
           +HA ++K G E N  ++ +LI+MY++                                  
Sbjct: 150 VHAHVLKLGLEHNAFVHTSLINMYAQNGELVNARLVFDKSSMRDAVSFTALITGYASKGF 209

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           ++ A ++F E+  R+V+SW +MI+G+A+ G    A+  F +M    + PN  T ++VLSA
Sbjct: 210 LDEARELFDEIPVRDVVSWNAMISGYAQSGRVEEAMAFFEEMRRAKVTPNVSTMLSVLSA 269

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           C+ +G   +     RS  ++ G+   +     ++D+  + G L EA      +    +V+
Sbjct: 270 CAQSGSSLQLGNWVRSWIEDRGLGSNIRLVNGLIDMYVKCGDLEEASNLFEKIQ-DKNVV 328

Query: 660 VWRTFLGA 667
            W   +G 
Sbjct: 329 SWNVMIGG 336


>gi|125532437|gb|EAY79002.1| hypothetical protein OsI_34111 [Oryza sativa Indica Group]
          Length = 847

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 288/829 (34%), Positives = 457/829 (55%), Gaps = 58/829 (6%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNK 142
           LL+SC R+ +   G+L+H+ L  S     S  L N LI++YS C DL  A ++F +M  +
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM-PR 84

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE--------------------YC 182
           R+ VSW++++S         DA+  F  M   G  P                      +C
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAASHC 144

Query: 183 FS----------------------------AVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            S                            +++++C    ++  G +++  L+  G   +
Sbjct: 145 HSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGAAAA 204

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
              +   LI M+     DL SA ++F  M  +N V WT +++  +Q     DA+  F  M
Sbjct: 205 STFLANHLITMYSH-CADLASALRLFAAMPRRNAVSWTTLVSGLSQNLMHADALAAFAAM 263

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             +G  P RF LS    A + L      +   + A   G   ++ V  +L DMY+KC   
Sbjct: 264 RRAGVAPTRFALSSAARAAAALGAPLRARSCTASA-SVGFDTELFVASNLADMYSKC--- 319

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFAS 393
           G + ++ +VFD+M   + ++WTA+I GY ++G  +  AV  F DM  +G V  +   F S
Sbjct: 320 GLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEA-AVLSFRDMKREGLVGADQHVFCS 378

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE-SLFEK 452
           VL A G L D  +++ ++    K G  L+  V N+LI MYA+S  +E A +  +      
Sbjct: 379 VLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPGGW 438

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           N+VS  +M+D Y +    E+A  +  E+   GV  + +TF+S++ G +    + +G Q+H
Sbjct: 439 NVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLH 498

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           A++IK+    +  + + L+ MY +C  +  + Q+F E+E R  I+W ++I  FA+HG   
Sbjct: 499 AQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGR 558

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            A++ F +M+  GI+PN I ++++L+ACSHAGL+ EG K+F SM + HGI  + EHY+C+
Sbjct: 559 EAIQAFDRMIYSGIRPNHIAFVSLLTACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCI 618

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           +D  GR+G L EA +FI  MP+  +   W + LGACR+ G  ELG+ AA+ +++ +P + 
Sbjct: 619 IDTYGRAGRLDEAYKFISEMPIKPNAYGWCSLLGACRMRGSKELGEVAAQNLMKLEPGNT 678

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
             H+ LS +YAS G WE V  +RK M++  + K  G SW++++ K H F   + SHP+  
Sbjct: 679 GIHVSLSGIYASLGQWEDVKAVRKLMRDSRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQK 738

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           +IY +L++L  +IKE GY+PDT+F+   LE+  K + L  HSE+IAVAF LIS   +KPI
Sbjct: 739 DIYEKLEELTTRIKEEGYIPDTSFLPCNLEDIAKERILRYHSERIAVAFALISMPATKPI 798

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V KNLR+C DCHTA K+I  V  R+I++RD++RFHH  +G+CSC DYW
Sbjct: 799 IVKKNLRICIDCHTAFKFICKVERRDIIVRDNSRFHHFVNGRCSCGDYW 847



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 124/541 (22%), Positives = 240/541 (44%), Gaps = 59/541 (10%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            ++++++C    ++  G +++  L+  G   +   +   LI M+     DL SA ++F  
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH-CADLASALRLFAA 81

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT----------------- 285
           M  +N V WT +++  +Q     DA+  F  M  +G  P R                   
Sbjct: 82  MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRLIYETKFHNTLGPKHTLAA 141

Query: 286 -------------------------------LSGVVSACSELELFTSGKQLHSWAIRTG- 313
                                          L+ ++ +C        G+ LH+  + +G 
Sbjct: 142 SHCHSGPTLMVKYWGQRLWRPPAPAAATTVHLASLLQSCGRAGDLRRGRLLHARLVLSGA 201

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
            A    +   L+ MY+ C     +  + ++F  M   N +SWT +++G  Q+     +A+
Sbjct: 202 AAASTFLANHLITMYSHC---ADLASALRLFAAMPRRNAVSWTTLVSGLSQN-LMHADAL 257

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
             F+ M +  VAP  F  +S  +A   L     A    T +   G   +  V ++L  MY
Sbjct: 258 AAFAAMRRAGVAPTRFALSSAARAAAALGAPLRARSC-TASASVGFDTELFVASNLADMY 316

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTF 492
           ++ G + +A + F+ + +K+ V++  M+D YAKN + E A     +++  G VG   + F
Sbjct: 317 SKCGLLSEACRVFDQMPQKDAVAWTAMIDGYAKNGSLEAAVLSFRDMKREGLVGADQHVF 376

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK-EME 551
            S+LS +  +      + IH  + K+GFE    + NALI MY++  +VE+A +V K +  
Sbjct: 377 CSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVRNALIDMYAKSMDVESASRVLKIDPG 436

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
             NV+S TSMI G+ +      AL I+ ++   G++PN  T+ +++  C+   L+ +G  
Sbjct: 437 GWNVVSGTSMIDGYIETDCVEEALVIYVELRRQGVEPNEFTFSSMIKGCAMQALLEQG-A 495

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
              +   +  +++     + +VD+ G+ G ++ +++    +    D+  W   +     H
Sbjct: 496 QLHAQVIKTDLIRDSFVGSTLVDMYGKCGLISLSMQLFNEIEYRTDI-AWNAVINVFAQH 554

Query: 672 G 672
           G
Sbjct: 555 G 555



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 179/398 (44%), Gaps = 53/398 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKG-NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           +  +G ++ A+ +   M ++G    D   +  +L +    ++  L K +H  +T++  E 
Sbjct: 347 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 406

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              + N+LI +Y+K  D+  A+++ K      ++VS +SMI  Y+      +A+ ++VE+
Sbjct: 407 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 466

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G  PNE+ FS++I+ C+    +  G  ++  ++K      D  VG  L+DM+ K G 
Sbjct: 467 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLI-RDSFVGSTLVDMYGKCGL 525

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           + L  + ++F+++  +  + W  +I    Q G  R+AI+ F  MI SG  P+      ++
Sbjct: 526 ISL--SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLL 583

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +ACS                                        G VD+  K F  M + 
Sbjct: 584 TACSHA--------------------------------------GLVDEGLKYFYSMKEA 605

Query: 351 NVMS-----WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           + +      ++ II  Y ++G  D EA K  S+M    + PN + + S+L AC  +  S 
Sbjct: 606 HGIEPKEEHYSCIIDTYGRAGRLD-EAYKFISEM---PIKPNAYGWCSLLGAC-RMRGSK 660

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
              +V    + +    +  +  SL  +YA  G+ ED +
Sbjct: 661 ELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVK 698


>gi|449439555|ref|XP_004137551.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Cucumis sativus]
          Length = 776

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/748 (34%), Positives = 430/748 (57%), Gaps = 60/748 (8%)

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----------GFCPNEY--CFSAVIRACS 191
           DIV W+  IS+Y+ +G+   A+ +F  M             G+  N    C   V     
Sbjct: 59  DIVKWNRKISAYMRKGQCESALSVFNGMRRRSTVTYNAMISGYLSNNKFDCARKVFEKMP 118

Query: 192 NTENVAIGHIIYGFLLKCGYF-----------DSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + + ++   ++ G+ +K G             + DV    A++  F +    +E A K+F
Sbjct: 119 DRDLISWNVMLSGY-VKNGNLSAARALFNQMPEKDVVSWNAMLSGFAQNGF-VEEARKIF 176

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+M  KN + W  +++   Q G   DA RLF   +    +     + G V    +  L  
Sbjct: 177 DQMLVKNEISWNGLLSAYVQNGRIEDARRLFDSKMDWEIVSWNCLMGGYV---RKKRLDD 233

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           +        +R  ++ ++     ++  YA+   +G + ++R++F+ +   +V +WTA+++
Sbjct: 234 ARSLFDRMPVRDKISWNI-----MITGYAQ---NGLLSEARRLFEELPIRDVFAWTAMVS 285

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G+VQ+G  D EA ++F +M +     N  ++ ++           +A  V +  +++ R 
Sbjct: 286 GFVQNGMLD-EATRIFEEMPE----KNEVSWNAM-----------IAGYVQSQQIEKARE 329

Query: 421 LDDCV-------GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           L D +        N++++ YA+ G ++ A+  F+ + +++ +S+  M+  YA++  SE+A
Sbjct: 330 LFDQMPSRNTSSWNTMVTGYAQCGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEA 389

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L  +++  G   +    A  LS  + I A+  G+Q+H R++K+GF++ +   NAL++M
Sbjct: 390 LHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAM 449

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y +C ++E AF VF+++ +++++SW +MI G+A+HGF   AL +F  M    IKP+ +T 
Sbjct: 450 YGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMKMT-IKPDDVTL 508

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           + VLSACSH G + +G ++F SMY  +GI    +HY CM+DLLGR+G L EAL  ++SMP
Sbjct: 509 VGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMP 568

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
              D   W   LGA R+HGDTELG+ AAE + E +P +   ++LLSNLYA++G W  V  
Sbjct: 569 FYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPDNSGMYVLLSNLYAASGRWREVRE 628

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +R +M+++ + K  G SW+E  NK H F VG+ SHP+   IYA L++L L++K+ G++  
Sbjct: 629 MRSKMRDKGVKKVPGYSWVEIQNKTHIFTVGDCSHPEAERIYAYLEELDLELKKDGFVSS 688

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
           T  VLH++EEE+K   L  HSEK+AVAFG++S    +PIRV KNLRVC DCH AIK+IS 
Sbjct: 689 TKLVLHDVEEEEKEHMLKYHSEKLAVAFGILSIPPGRPIRVIKNLRVCEDCHNAIKHISK 748

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T R+I++RDSNRFHH  +G CSC DYW
Sbjct: 749 ITQRQIIVRDSNRFHHFSEGSCSCGDYW 776



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 140/560 (25%), Positives = 248/560 (44%), Gaps = 75/560 (13%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++V  N++IS Y      + A K+F+ M + RD++SW+ M+S YV  G    A  +F +M
Sbjct: 90  STVTYNAMISGYLSNNKFDCARKVFEKMPD-RDLISWNVMLSGYVKNGNLSAARALFNQM 148

Query: 172 LEL----------GFCPNEYC------FSAVIRACSNTEN------VAIGHIIYGFLLKC 209
            E           GF  N +       F  ++     + N      V  G I     L  
Sbjct: 149 PEKDVVSWNAMLSGFAQNGFVEEARKIFDQMLVKNEISWNGLLSAYVQNGRIEDARRLFD 208

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
              D ++     L+  +V+    L+ A  +FD+M  ++ + W +MIT   Q G   +A R
Sbjct: 209 SKMDWEIVSWNCLMGGYVRKK-RLDDARSLFDRMPVRDKISWNIMITGYAQNGLLSEARR 267

Query: 270 LFLDM----------ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW-AIRTGL---- 314
           LF ++          ++SGF+ +     G++   + +      K   SW A+  G     
Sbjct: 268 LFEELPIRDVFAWTAMVSGFVQN-----GMLDEATRIFEEMPEKNEVSWNAMIAGYVQSQ 322

Query: 315 -------------ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
                        + +     ++V  YA+C   G++D ++ +FD M   + +SW A+I+G
Sbjct: 323 QIEKARELFDQMPSRNTSSWNTMVTGYAQC---GNIDQAKILFDEMPQRDCISWAAMISG 379

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y QS G+ +EA+ LF  M +     N    A  L +C  +    + +Q++   VK G   
Sbjct: 380 YAQS-GQSEEALHLFIKMKRDGGILNRSALACALSSCAEIAALELGKQLHGRLVKAGFQT 438

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
               GN+L++MY + G +E+A   FE + EK++VS+NTM+  YA++   ++A  L   ++
Sbjct: 439 GYIAGNALLAMYGKCGSIEEAFDVFEDITEKDIVSWNTMIAGYARHGFGKEALALFESMK 498

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANV 540
            T +     T   +LS  S  G + KG E  ++     G  +N   Y  +I +  R   +
Sbjct: 499 MT-IKPDDVTLVGVLSACSHTGFVDKGMEYFNSMYQNYGITANAKHYTCMIDLLGRAGRL 557

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAV 596
           + A  + K M    +  +W +++     HG      +A E  ++M  D    N   Y+ +
Sbjct: 558 DEALNLMKSMPFYPDAATWGALLGASRIHGDTELGEKAAEKVFEMEPD----NSGMYVLL 613

Query: 597 LSACSHAGLISEGWKHFRSM 616
            +  + +G     W+  R M
Sbjct: 614 SNLYAASGR----WREVREM 629



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 217/457 (47%), Gaps = 39/457 (8%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR++ A    D         ++ +++ L+   +R +     +   SL  R  +  +
Sbjct: 194 YVQNGRIEDARRLFDSKMD----WEIVSWNCLMGGYVRKKRLDDAR---SLFDRMPVR-D 245

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            +  N +I+ Y++ G L+EA ++F+ +   RD+ +W++M+S +V  G   +A  +F EM 
Sbjct: 246 KISWNIMITGYAQNGLLSEARRLFEEL-PIRDVFAWTAMVSGFVQNGMLDEATRIFEEMP 304

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV- 231
           E     NE  ++A+I     ++ +     +         FD       +  +  V G   
Sbjct: 305 E----KNEVSWNAMIAGYVQSQQIEKAREL---------FDQMPSRNTSSWNTMVTGYAQ 351

Query: 232 --DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             +++ A  +FD+M +++ + W  MI+   Q G   +A+ LF+ M   G + +R  L+  
Sbjct: 352 CGNIDQAKILFDEMPQRDCISWAAMISGYAQSGQSEEALHLFIKMKRDGGILNRSALACA 411

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +S+C+E+     GKQLH   ++ G       G +L+ MY KC   GS++++  VF+ + +
Sbjct: 412 LSSCAEIAALELGKQLHGRLVKAGFQTGYIAGNALLAMYGKC---GSIEEAFDVFEDITE 468

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVA 407
            +++SW  +I GY +  G  KEA+ LF  M +  + P+  T   VL AC +   +D  + 
Sbjct: 469 KDIVSWNTMIAGYARH-GFGKEALALFESM-KMTIKPDDVTLVGVLSACSHTGFVDKGM- 525

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--- 463
           E   +     G   +      +I +  R+GR+++A    +S+ F  +  ++  ++ A   
Sbjct: 526 EYFNSMYQNYGITANAKHYTCMIDLLGRAGRLDEALNLMKSMPFYPDAATWGALLGASRI 585

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +      EKA E + E+E    G   Y   S L  AS
Sbjct: 586 HGDTELGEKAAEKVFEMEPDNSGM--YVLLSNLYAAS 620


>gi|357138408|ref|XP_003570784.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Brachypodium distachyon]
          Length = 750

 Score =  486 bits (1252), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 255/693 (36%), Positives = 385/693 (55%), Gaps = 68/693 (9%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM----------ILSGF--- 279
           L  A +VFD M  +N V    +++   + G  RD  RLF  +          +L+GF   
Sbjct: 62  LPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAVSYNALLAGFSRA 121

Query: 280 --------------------LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                                P R T+SGVV   S L     G+Q+H   +R G      
Sbjct: 122 GAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHCQILRLGFGAYAF 181

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV--------------------------- 352
            G  LVDMYAK    G + D+R+VFD M   NV                           
Sbjct: 182 TGSPLVDMYAKV---GPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAEARALFEAIE 238

Query: 353 ----MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
               ++WT ++TG  Q+G  + EA+ +F  M    V  + +TF S+L ACG L      +
Sbjct: 239 ERDSITWTTMVTGLTQNG-LESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGK 297

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++ +  +     +  VG++L+ MY++   +  A   F  +  KN++S+  M+  Y +N 
Sbjct: 298 QIHAYITRTCYEDNVFVGSALVDMYSKCRSVRLAEAVFRRMMWKNIISWTAMIVGYGQNG 357

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A  +  E++  G+    +T  S++S  +++ ++ +G Q H   + SG      + N
Sbjct: 358 CGEEAVRVFSEMQRDGIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLRPYVTVSN 417

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+++Y +C ++E A ++F EM   + +SWT+++ G+A+ G A   +++F KML+ G+KP
Sbjct: 418 ALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKP 477

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           +G+T+I VLSACS +GL+ +G  +F SM  +H IV   +HY CM+DL  RSG L +A EF
Sbjct: 478 DGVTFIGVLSACSRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYSRSGWLKQAEEF 537

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ MP   D   W T L ACR+ GD E+GK AAE +L+ DPQ+PA+++LL +++AS G W
Sbjct: 538 IKQMPRCPDAFGWATLLSACRLRGDMEIGKWAAENLLKLDPQNPASYVLLCSMHASKGEW 597

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             VA +R+ M++R + KE GCSWI+  NKVH F   + SHP +  IY +L  L  K+ E 
Sbjct: 598 NDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRTIYEKLQWLNSKMVEE 657

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY PD + VLH++ + +KV  L  HSEK+A+AFGLI      PIR+ KNLRVC DCH A 
Sbjct: 658 GYKPDVSSVLHDVADAEKVHMLSHHSEKLAIAFGLIFVPPEMPIRIVKNLRVCVDCHNAT 717

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS +TGR+I++RD+ RFH   +G CSC D+W
Sbjct: 718 KFISKITGRDILVRDAVRFHKFSNGICSCGDFW 750



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 143/500 (28%), Positives = 240/500 (48%), Gaps = 69/500 (13%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N V+ N++I+   +C  + EA  +F+++  +RD ++W++M++     G + +A+ +F  M
Sbjct: 210 NVVMCNTMITGLLRCKMVAEARALFEAI-EERDSITWTTMVTGLTQNGLESEALDVFRRM 268

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G   ++Y F +++ AC     +  G  I+ ++ +  Y D +V VG AL+DM+ K  S
Sbjct: 269 RAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYED-NVFVGSALVDMYSKCRS 327

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           V L  A  VF +M  KN + WT MI    Q GC  +A+R+F +M   G  PD FTL  V+
Sbjct: 328 VRLAEA--VFRRMMWKNIISWTAMIVGYGQNGCGEEAVRVFSEMQRDGIKPDDFTLGSVI 385

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           S+C+ L     G Q H  A+ +GL   V V  +LV +Y KC   GS++D+ ++FD M  H
Sbjct: 386 SSCANLASLEEGAQFHCLALVSGLRPYVTVSNALVTLYGKC---GSIEDAHRLFDEMSFH 442

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + +SWTA++ GY Q  G+ KE + LF  M+   V P+  TF  VL AC            
Sbjct: 443 DQVSWTALVMGYAQF-GKAKETIDLFEKMLSKGVKPDGVTFIGVLSAC------------ 489

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV-----SYNTMVDAYA 465
                                  +RSG ++  R  F S+ + + +      Y  M+D Y+
Sbjct: 490 -----------------------SRSGLVDKGRSYFHSMQQDHDIVPLDDHYTCMIDLYS 526

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           ++   ++A E + ++        A+ +A+LLS     G +  G+     ++K     N  
Sbjct: 527 RSGWLKQAEEFIKQMPRC---PDAFGWATLLSACRLRGDMEIGKWAAENLLKLD-PQNPA 582

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNV--------ISWTSMITGFA----KHGFAAR 573
            Y  L SM++         ++ + M DR V        I + + +  F+     H F+  
Sbjct: 583 SYVLLCSMHASKGEWNDVAKLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSHPFSRT 642

Query: 574 ALE----IFYKMLADGIKPN 589
             E    +  KM+ +G KP+
Sbjct: 643 IYEKLQWLNSKMVEEGYKPD 662



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 185/409 (45%), Gaps = 59/409 (14%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M  +G   D  T+  +L +C        GK +H+ +TR+  E N  
Sbjct: 254 QNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTCYEDNVF 313

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKC  +  A  +F+ M  K +I+SW++MI  Y   G   +A+ +F EM   
Sbjct: 314 VGSALVDMYSKCRSVRLAEAVFRRMMWK-NIISWTAMIVGYGQNGCGEEAVRVFSEMQRD 372

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P+++   +VI +C+N  ++  G   +   L  G     V V  AL+ ++ K GS+  
Sbjct: 373 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSG-LRPYVTVSNALVTLYGKCGSI-- 429

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+++FD+M+  + V WT ++    Q G  ++ I LF  M+  G  PD  T  GV+SAC
Sbjct: 430 EDAHRLFDEMSFHDQVSWTALVMGYAQFGKAKETIDLFEKMLSKGVKPDGVTFIGVLSAC 489

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
           S                R+GL                      VD  R  F  M  DH++
Sbjct: 490 S----------------RSGL----------------------VDKGRSYFHSMQQDHDI 511

Query: 353 MS----WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           +     +T +I  Y +SG   K+A +    M +    P+ F +A++L AC    D  + +
Sbjct: 512 VPLDDHYTCMIDLYSRSGWL-KQAEEFIKQMPR---CPDAFGWATLLSACRLRGDMEIGK 567

Query: 409 QVYTHAVKRGRALDDCVGNS---LISMYARSGRMEDARKAFESLFEKNL 454
               + +K    LD     S   L SM+A  G   D  K    + ++ +
Sbjct: 568 WAAENLLK----LDPQNPASYVLLCSMHASKGEWNDVAKLRRGMRDRQV 612



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 75/328 (22%), Positives = 146/328 (44%), Gaps = 77/328 (23%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN---LNSEKAFELLHE---- 479
           N+L++ YA SG +  AR+ F+++  +NLV+ N+++ A A+     + E+ F  L +    
Sbjct: 50  NTLLTAYASSGLLPHARRVFDAMPGRNLVTGNSLLSALARAGLVRDMERLFTSLPQRDAV 109

Query: 480 --------------------------IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
                                      ++ GV  S  T + ++  AS++G    G Q+H 
Sbjct: 110 SYNALLAGFSRAGAHARAAGAYVALLRDEAGVRPSRITMSGVVMVASALGDRALGRQVHC 169

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV------------------ 555
           +I++ GF +     + L+ MY++   +  A +VF EME +NV                  
Sbjct: 170 QILRLGFGAYAFTGSPLVDMYAKVGPIGDARRVFDEMEGKNVVMCNTMITGLLRCKMVAE 229

Query: 556 -------------ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
                        I+WT+M+TG  ++G  + AL++F +M A+G+  +  T+ ++L+AC  
Sbjct: 230 ARALFEAIEERDSITWTTMVTGLTQNGLESEALDVFRRMRAEGVGIDQYTFGSILTACGA 289

Query: 603 AGLISEGWKHF----RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
              + EG +      R+ Y+++  V      + +VD+  +  S+  A    R M +  ++
Sbjct: 290 LAALEEGKQIHAYITRTCYEDNVFVG-----SALVDMYSKCRSVRLAEAVFRRM-MWKNI 343

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILE 686
           + W   +     +G    G+ A  +  E
Sbjct: 344 ISWTAMIVG---YGQNGCGEEAVRVFSE 368


>gi|217426788|gb|ACK44496.1| AT5G09950-like protein [Arabidopsis arenosa]
          Length = 772

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/656 (39%), Positives = 406/656 (61%), Gaps = 11/656 (1%)

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           G  ++G ++  G  D  V +G  L++M+ K GS+    A +VF  M EK++V W  MIT 
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSI--ADARRVFCFMMEKDSVSWNSMITG 109

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q GC  +A+  +  M     LP  FTL   +S+C+ L+    G+Q+H  +++ G+ L+
Sbjct: 110 LDQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLN 169

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V V  +L+ +YA+    G +++ RK+F  M +H+ +SW +II     S     EAV  F 
Sbjct: 170 VSVSNALMTLYAET---GYLNECRKIFSSMPEHDQVSWNSIIGALASSERSLPEAVACFL 226

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           + ++     N  TF+SVL A  +L    + +Q++  A+K   A +    N+LI+ Y + G
Sbjct: 227 NALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKCG 286

Query: 438 RMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
            M+   K F  + E+ + V++N+M+  Y  N    KA +L+  +  TG    ++ +A++L
Sbjct: 287 EMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAKALDLVWFMLQTGQRLDSFMYATVL 346

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           S  +S+  + +G ++HA  +++  ES+  + +AL+ MYS+C  ++ A + F  M  RN  
Sbjct: 347 SAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVRNSY 406

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           SW SMI+G+A+HG    AL++F  M  DG   P+ +T++ VLSACSHAGL+ EG+KHF S
Sbjct: 407 SWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFES 466

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC-RVHG-D 673
           M D +G+  R+EH++CM DLLGR+G L +  +FI  MP+  +VL+WRT LGAC R +G  
Sbjct: 467 MSDSYGLAPRIEHFSCMADLLGRAGELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRK 526

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            ELGK AAEM+ + +P++   ++LL N+YA+ G WE +   RK+MK+ ++ KEAG SW+ 
Sbjct: 527 AELGKKAAEMLFQLEPENAVNYVLLGNMYAAGGRWEDLVKARKKMKDADVKKEAGYSWVT 586

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
             + VH F  G+ SHP T  IY +L +L  K+++ GY+P T F L++LE+E K + L  H
Sbjct: 587 MKDGVHMFVAGDKSHPDTDVIYKKLKELNRKMRDAGYVPQTGFALYDLEQENKEEILSYH 646

Query: 794 SEKIAVAFGLIST-SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
           SEK+AVAF L +  S + PIR+ KNLRVCGDCH+A KYIS + GR+I+LRDSNR+ 
Sbjct: 647 SEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDCHSAFKYISKIEGRQIILRDSNRYE 702



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 134/512 (26%), Positives = 245/512 (47%), Gaps = 46/512 (8%)

Query: 97  GKLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           G+ VH  ++T   ++    I N L+++Y+KCG + +A ++F  M  K D VSW+SMI+  
Sbjct: 52  GREVHGHVITTGLVDFMVGIGNGLVNMYAKCGSIADARRVFCFMMEK-DSVSWNSMITGL 110

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              G  ++A+  +  M      P  +   + + +C++ +   +G  I+G  LK G  D +
Sbjct: 111 DQNGCFIEAVERYQSMRRHEILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLG-IDLN 169

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI--TRCTQLGCPRDAIRLFLD 273
           V V  AL+ ++ +    L    K+F  M E + V W  +I     ++   P +A+  FL+
Sbjct: 170 VSVSNALMTLYAETGY-LNECRKIFSSMPEHDQVSWNSIIGALASSERSLP-EAVACFLN 227

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
            + +G   +R T S V+SA S L     GKQ+H  A++  +A +     +L+  Y KC  
Sbjct: 228 ALRAGQKLNRITFSSVLSAVSSLSFGELGKQIHGLALKYNIADEATTENALIACYGKC-- 285

Query: 334 DGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
            G +D   K+F RM +  + ++W ++I+GY+ +    K A+ L   M+Q     + F +A
Sbjct: 286 -GEMDGCEKIFSRMSERRDDVTWNSMISGYIHNELLAK-ALDLVWFMLQTGQRLDSFMYA 343

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           +VL A  ++       +V+  +V+     D  VG++L+ MY++ GR++ A + F ++  +
Sbjct: 344 TVLSAFASVATLERGMEVHACSVRACLESDVVVGSALVDMYSKCGRLDYALRFFNTMPVR 403

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIE-DTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           N  S+N+M+  YA++   E+A +L   ++ D        TF  +LS  S           
Sbjct: 404 NSYSWNSMISGYARHGQGEEALKLFANMKLDGQTPPDHVTFVGVLSACS----------- 452

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA +++ GF+     + ++   Y     +E                ++ M     + G  
Sbjct: 453 HAGLLEEGFKH----FESMSDSYGLAPRIE---------------HFSCMADLLGRAGEL 493

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +  +   KM    +KPN + +  VL AC  A
Sbjct: 494 DKLEDFIDKM---PVKPNVLIWRTVLGACCRA 522



 Score =  142 bits (359), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 107/332 (32%), Positives = 179/332 (53%), Gaps = 13/332 (3%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L SC   +   LG+ +H    +  ++ N  + N+L++LY++ G LNE  KIF SM  + D
Sbjct: 142 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNECRKIFSSM-PEHD 200

Query: 145 IVSWSSMISSYVNRGKQV-DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            VSW+S+I +  +  + + +A+  F+  L  G   N   FS+V+ A S+     +G  I+
Sbjct: 201 QVSWNSIIGALASSERSLPEAVACFLNALRAGQKLNRITFSSVLSAVSSLSFGELGKQIH 260

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLG 262
           G  LK    D +     ALI  + K   +++   K+F +M+E ++ V W  MI+      
Sbjct: 261 GLALKYNIAD-EATTENALIACYGKCG-EMDGCEKIFSRMSERRDDVTWNSMISGYIHNE 318

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
               A+ L   M+ +G   D F  + V+SA + +     G ++H+ ++R  L  DV VG 
Sbjct: 319 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 378

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQ 381
           +LVDMY+KC   G +D + + F+ M   N  SW ++I+GY +  G+ +EA+KLF++M + 
Sbjct: 379 ALVDMYSKC---GRLDYALRFFNTMPVRNSYSWNSMISGYARH-GQGEEALKLFANMKLD 434

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           GQ  P+H TF  VL AC +   + + E+ + H
Sbjct: 435 GQTPPDHVTFVGVLSACSH---AGLLEEGFKH 463



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 156/315 (49%), Gaps = 11/315 (3%)

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            LGK +H L  +  +   +   N+LI+ Y KCG+++   KIF  M  +RD V+W+SMIS 
Sbjct: 254 ELGKQIHGLALKYNIADEATTENALIACYGKCGEMDGCEKIFSRMSERRDDVTWNSMISG 313

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y++      A+ +   ML+ G   + + ++ V+ A ++   +  G  ++   ++    +S
Sbjct: 314 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVR-ACLES 372

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV VG AL+DM+ K    L+ A + F+ M  +N+  W  MI+   + G   +A++LF +M
Sbjct: 373 DVVVGSALVDMYSKCG-RLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFANM 431

Query: 275 ILSGFL-PDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            L G   PD  T  GV+SACS   L   G K   S +   GLA  +     + D+  +  
Sbjct: 432 KLDGQTPPDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADLLGRA- 490

Query: 333 VDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM---IQGQVAPNH 388
             G +D      D+M +  NV+ W  ++    ++ GR  E  K  ++M   ++ + A N+
Sbjct: 491 --GELDKLEDFIDKMPVKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNY 548

Query: 389 FTFASVLKACGNLLD 403
               ++  A G   D
Sbjct: 549 VLLGNMYAAGGRWED 563



 Score = 70.5 bits (171), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 2/142 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++  + KA+  +  M Q G   D   Y+ +L +         G  VH+   R+ LE +
Sbjct: 314 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 373

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM- 171
            V+ ++L+ +YSKCG L+ A + F +M   R+  SW+SMIS Y   G+  +A+ +F  M 
Sbjct: 374 VVVGSALVDMYSKCGRLDYALRFFNTM-PVRNSYSWNSMISGYARHGQGEEALKLFANMK 432

Query: 172 LELGFCPNEYCFSAVIRACSNT 193
           L+    P+   F  V+ ACS+ 
Sbjct: 433 LDGQTPPDHVTFVGVLSACSHA 454


>gi|222631044|gb|EEE63176.1| hypothetical protein OsJ_17985 [Oryza sativa Japonica Group]
          Length = 745

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 274/751 (36%), Positives = 421/751 (56%), Gaps = 66/751 (8%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           ML  G   + +    V++AC    +   G   +G L+ C  F+S+V +  AL+ M+ + G
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHG-LICCNGFESNVFICNALVAMYSRCG 59

Query: 230 SVDLESAYKVFDKMTEK---NTVGWTLMITRCTQLGCPRDAIRLFLDMIL------SGFL 280
           S  LE A  +FD++T++   + + W  +++   +      A+ LF  M L      +   
Sbjct: 60  S--LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNER 117

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
            D  ++  ++ AC  L+     K++H  AIR G  LDV VG +L+D YAKC   G ++++
Sbjct: 118 SDIISIVNILPACGSLKAVPQTKEVHGNAIRNGTFLDVFVGNALIDAYAKC---GLMENA 174

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSG---------------------------------- 366
            KVF+ M   +V+SW A++ GY QSG                                  
Sbjct: 175 VKVFNMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQR 234

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR--------- 417
           G   EA+ +F  MI     PN  T  SVL AC +L   +   +++ +++K          
Sbjct: 235 GCSHEALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDF 294

Query: 418 -GRALDDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAF 474
            G   D  V N+LI MY++    + AR  F+   L E+N+V++  M+  +A+  +S  A 
Sbjct: 295 GGEDEDLMVYNALIDMYSKCRSFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSNDAL 354

Query: 475 ELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF--ESNHCIYNAL 530
           +L  E+  E  GV  +AYT + +L   + + AI  G+QIHA +++      S + + N L
Sbjct: 355 KLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAYVLRHHQYDSSAYFVANCL 414

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           I+MYS+C +V+ A  VF  M  ++ ISWTSM+TG+  HG  + AL+IF KM   G  P+ 
Sbjct: 415 INMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPDD 474

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           IT++ VL ACSH G++ +G  +F SM  ++G+  R EHYA  +DLL R G L +A + ++
Sbjct: 475 ITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTVK 534

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
            MP+    +VW   L ACRVH + EL +HA   ++E + ++  ++ L+SN+YA+AG W+ 
Sbjct: 535 DMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAENDGSYTLISNIYATAGRWKD 594

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           VA IR  MK+  + K  GCSW++       F VG+ SHP + +IYA L+ L  +IK  GY
Sbjct: 595 VARIRHLMKKSGIKKRPGCSWVQGQKGTASFFVGDRSHPLSPQIYALLESLIDRIKAMGY 654

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +P+TNF LH+++EE+K   L +HSEK+A+A+GL++T    PIR+ KNLRVCGDCH+A  Y
Sbjct: 655 VPETNFALHDVDEEEKNNLLVEHSEKLALAYGLLTTFPGCPIRITKNLRVCGDCHSAFTY 714

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS +   EIV+RD +RFHH K+G CSC  YW
Sbjct: 715 ISKIVDHEIVVRDPSRFHHFKNGSCSCGGYW 745



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 170/625 (27%), Positives = 297/625 (47%), Gaps = 83/625 (13%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G   D  T   +LK+C    ++  G   H L+  +  E N  I N+L+++YS+CG 
Sbjct: 1   MLRAGTRLDHFTLPHVLKACGELPSYRCGSAFHGLICCNGFESNVFICNALVAMYSRCGS 60

Query: 129 LNEANKIFKSMGNK--RDIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGFCP-NE---- 180
           L EA+ IF  +  +   D++SW+S++S++V       A+ +F +M L +   P NE    
Sbjct: 61  LEEASMIFDEITQRGIDDVISWNSIVSAHVKSSNAWTALDLFSKMTLIVHEKPTNERSDI 120

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
                ++ AC + + V     ++G  ++ G F  DV VG ALID + K  + +E+A KVF
Sbjct: 121 ISIVNILPACGSLKAVPQTKEVHGNAIRNGTF-LDVFVGNALIDAYAKCGL-MENAVKVF 178

Query: 241 DKMTEKNTVG-----------------------------------WTLMITRCTQLGCPR 265
           + M  K+ V                                    WT +I   +Q GC  
Sbjct: 179 NMMEFKDVVSWNAMVAGYSQSGNFKAAFELFKNMRKENIPLDMVTWTAVIAGYSQRGCSH 238

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL--------- 316
           +A+ +F  MI SG LP+  T+  V+SAC+ L  F+ G ++H+++++  L           
Sbjct: 239 EALNVFRQMIFSGSLPNCVTIISVLSACASLGAFSQGMEIHAYSLKNCLLTLDNDFGGED 298

Query: 317 -DVCVGCSLVDMYAKCTVDGSVDDSRKVFDR--MLDHNVMSWTAIITGYVQSGGRDKEAV 373
            D+ V  +L+DMY+KC    S   +R +FD   + + NV++WT +I G+ Q G  + +A+
Sbjct: 299 EDLMVYNALIDMYSKCR---SFKAARSIFDDIPLEERNVVTWTVMIGGHAQYGDSN-DAL 354

Query: 374 KLFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC---VGNS 428
           KLF +MI     VAPN +T + +L AC +L    + +Q++ + V R    D     V N 
Sbjct: 355 KLFVEMISEPYGVAPNAYTISCILMACAHLAAIRIGKQIHAY-VLRHHQYDSSAYFVANC 413

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI+MY++ G ++ AR  F+S+ +K+ +S+ +M+  Y  +    +A ++  ++   G    
Sbjct: 414 LINMYSKCGDVDTARHVFDSMSQKSAISWTSMMTGYGMHGRGSEALDIFDKMRKAGFVPD 473

Query: 489 AYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             TF  +L   S  G + +G     +     G       Y   I + +R   ++ A++  
Sbjct: 474 DITFLVVLYACSHCGMVDQGLSYFDSMSADYGLTPRAEHYAYAIDLLARFGRLDKAWKTV 533

Query: 548 KEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
           K+M  +   + W ++++    H     A  AL    +M A+    N  +Y  + +  + A
Sbjct: 534 KDMPMEPTAVVWVALLSACRVHSNVELAEHALNKLVEMNAE----NDGSYTLISNIYATA 589

Query: 604 GLISEGWK---HFRSMYDEHGIVQR 625
           G     WK     R +  + GI +R
Sbjct: 590 GR----WKDVARIRHLMKKSGIKKR 610


>gi|356495778|ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 262/745 (35%), Positives = 420/745 (56%), Gaps = 33/745 (4%)

Query: 140 GNKRDIVSWSSMISSYV------NRGKQVDAIHM--------------FVE-MLELGFCP 178
            N   I SW S+ SS+       N+  QV+ +H+              F+  M ++G   
Sbjct: 31  ANFAQIPSWVSLKSSHSSLRTHQNQQGQVENLHLISLAKQGNLREVHEFIRNMDKVGISI 90

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N   +  + + C     ++ G + +  L +    +S+  +   ++ M+        SA +
Sbjct: 91  NPRSYEYLFKMCGTLGALSDGKLFHNRLQRMA--NSNKFIDNCILKMYCDCK-SFTSAER 147

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
            FDK+ +++   W+ +I+  T+ G   +A+RLFL M+  G  P+    S ++ + ++  +
Sbjct: 148 FFDKIVDQDLSSWSTIISAYTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSM 207

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              GKQ+HS  IR G A ++ +   + +MY KC   G +D +    ++M   N ++ T +
Sbjct: 208 LDLGKQIHSQLIRIGFAANISIETLISNMYVKC---GWLDGAEVATNKMTRKNAVACTGL 264

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           + GY ++  R+++A+ LF  MI   V  + F F+ +LKAC  L D    +Q++++ +K G
Sbjct: 265 MVGYTKAA-RNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG 323

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              +  VG  L+  Y +  R E AR+AFES+ E N  S++ ++  Y ++   ++A E+  
Sbjct: 324 LESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFK 383

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
            I   GV  +++ + ++    S++  +  G QIHA  IK G  +     +A+ISMYS+C 
Sbjct: 384 AIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKCG 443

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            V+ A Q F  ++  + ++WT++I   A HG A  AL +F +M   G++PN +T+I +L+
Sbjct: 444 QVDYAHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVTFIGLLN 503

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSH+GL+ EG K   SM DE+G+   ++HY CM+D+  R+G L EALE IRS+P   DV
Sbjct: 504 ACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDV 563

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           + W++ LG C  H + E+G  AA+ I   DP D A ++++ NLYA AG W+  A  RK M
Sbjct: 564 MSWKSLLGGCWSHRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMM 623

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG--YLPDTNF 776
            ERNL KE  CSWI    KVH+F VG+  HP+T +IY++L +L    K+     L + N 
Sbjct: 624 AERNLRKEVSCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNFSFKKSKERLLNEENA 683

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           +    E +++   L  HSE++A+A+GLI T+   PI VFKN R C DCH   K +S+VTG
Sbjct: 684 LCDFTERKEQ---LLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHDFAKRVSIVTG 740

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           RE+V+RD NRFHHI  G+CSC DYW
Sbjct: 741 RELVVRDGNRFHHINSGECSCRDYW 765



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 207/422 (49%), Gaps = 31/422 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR+ +A+     M   G  P+   +S L+ S        LGK +HS L R     N
Sbjct: 167 YTEEGRIDEAVRLFLRMLDLGITPNSSIFSTLIMSFTDPSMLDLGKQIHSQLIRIGFAAN 226

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I   + ++Y KCG L+ A      M  +++ V+ + ++  Y    +  DA+ +F +M+
Sbjct: 227 ISIETLISNMYVKCGWLDGAEVATNKM-TRKNAVACTGLMVGYTKAARNRDALLLFGKMI 285

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   + + FS +++AC+   ++  G  I+ + +K G  +S+V VG  L+D +VK    
Sbjct: 286 SEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG-LESEVSVGTPLVDFYVK-CAR 343

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E+A + F+ + E N   W+ +I    Q G    A+ +F  +   G L + F  + +  A
Sbjct: 344 FEAARQAFESIHEPNDFSWSALIAGYCQSGQFDRALEVFKAIRSKGVLLNSFIYTNIFQA 403

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS +     G Q+H+ AI+ GL   +    +++ MY+KC   G VD + + F  +   + 
Sbjct: 404 CSAVSDLICGAQIHADAIKKGLVAYLSGESAMISMYSKC---GQVDYAHQAFLTIDKPDT 460

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++WTAII  +    G+  EA++LF +M    V PN  TF  +L AC            ++
Sbjct: 461 VAWTAIICAHAYH-GKAFEALRLFKEMQGSGVRPNAVTFIGLLNACS-----------HS 508

Query: 413 HAVKRGRALDDCVG------------NSLISMYARSGRMEDARKAFESL-FEKNLVSYNT 459
             VK G+ + D +             N +I +Y+R+G +++A +   SL FE +++S+ +
Sbjct: 509 GLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRAGLLQEALEVIRSLPFEPDVMSWKS 568

Query: 460 MV 461
           ++
Sbjct: 569 LL 570



 Score =  110 bits (274), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 154/318 (48%), Gaps = 16/318 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +    R + A+     M  +G   D   +S++LK+C    + + GK +HS   +  L
Sbjct: 265 MVGYTKAARNRDALLLFGKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGL 324

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E    +   L+  Y KC     A + F+S+    D  SWS++I+ Y   G+   A+ +F 
Sbjct: 325 ESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDF-SWSALIAGYCQSGQFDRALEVFK 383

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG---YFDSDVCVGCALIDMF 226
            +   G   N + ++ + +ACS   ++  G  I+   +K G   Y   +     A+I M+
Sbjct: 384 AIRSKGVLLNSFIYTNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGE----SAMISMY 439

Query: 227 VK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
            K G VD   A++ F  + + +TV WT +I      G   +A+RLF +M  SG  P+  T
Sbjct: 440 SKCGQVDY--AHQAFLTIDKPDTVAWTAIICAHAYHGKAFEALRLFKEMQGSGVRPNAVT 497

Query: 286 LSGVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
             G+++ACS   L   GK+ L S +   G+   +     ++D+Y++    G + ++ +V 
Sbjct: 498 FIGLLNACSHSGLVKEGKKILDSMSDEYGVNPTIDHYNCMIDVYSRA---GLLQEALEVI 554

Query: 345 DRM-LDHNVMSWTAIITG 361
             +  + +VMSW +++ G
Sbjct: 555 RSLPFEPDVMSWKSLLGG 572


>gi|224137958|ref|XP_002322694.1| predicted protein [Populus trichocarpa]
 gi|222867324|gb|EEF04455.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  486 bits (1251), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 235/575 (40%), Positives = 362/575 (62%), Gaps = 6/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           +++ C        G+++H+  I+T     V +   L+ +Y KC   G    +R VFD M 
Sbjct: 16  LLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCECLGC---ARHVFDEMR 72

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV+SWTA+I+GY Q G    EA+ LF  M++    PN FTFA+VL +C       +  
Sbjct: 73  ERNVVSWTAMISGYSQRG-FASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGR 131

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q+++H  KR       VG+SL+ MYA++GR+ +AR  FE L E+++VS   ++  YA+  
Sbjct: 132 QIHSHIFKRNYENHIFVGSSLLDMYAKAGRIHEARGVFECLPERDVVSCTAIISGYAQLG 191

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A EL   ++  G+ ++  T+ASLL+  S + A+  G+Q+H+ +++        + N
Sbjct: 192 LDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFYVVLQN 251

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IK 587
           +LI MYS+C N+  A ++F  M  R VISW +M+ G++KHG     +++F  M  +  +K
Sbjct: 252 SLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVK 311

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR-MEHYACMVDLLGRSGSLTEAL 646
           P+ +T++AVLS CSH GL  +G + F  M +    ++  +EHY C++DLLGR+G + EA 
Sbjct: 312 PDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRAGRVEEAF 371

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           E I+ MP      +W + LGACRVH +T +G+     +LE +P++   +++LSNLYASAG
Sbjct: 372 ELIKKMPFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLLEIEPENAGNYVILSNLYASAG 431

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE V N+R+ M E+ +IKE G SWIE D  +H F+  + SHP+  E++ ++ +L +K K
Sbjct: 432 RWEDVRNVRELMMEKAVIKEPGRSWIELDQTIHTFYASDRSHPRREEVFLKVRELLVKFK 491

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+PD + VL++++EEQK + L  HSEK+A+AFGLISTS+  P+RV KNLR+C DCH 
Sbjct: 492 ESGYVPDQSCVLYDVDEEQKEKILLGHSEKLALAFGLISTSEGVPLRVIKNLRICVDCHN 551

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K++S V GR++ +RD NRFHH+  G CSC DYW
Sbjct: 552 FAKFVSKVYGRQVSIRDKNRFHHVAGGICSCGDYW 586



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/401 (31%), Positives = 216/401 (53%), Gaps = 15/401 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G     D Y++LL  C+  R    G+ VH+ + ++   P   +   LI LY+KC  
Sbjct: 1   MAIQGPEIKFDGYNMLLNECVNKRAVREGQRVHAHMIKTCYLPPVYLSTRLIILYTKCEC 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A  +F  M  +R++VSW++MIS Y  RG   +A+H+FV+ML     PNE+ F+ V+ 
Sbjct: 61  LGCARHVFDEM-RERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLS 119

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           +C+      +G  I+  + K  Y ++ + VG +L+DM+ K    +  A  VF+ + E++ 
Sbjct: 120 SCTGFSGFELGRQIHSHIFKRNY-ENHIFVGSSLLDMYAKAG-RIHEARGVFECLPERDV 177

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V  T +I+   QLG   +A+ LF  +   G   +  T + +++A S L     GKQ+HS 
Sbjct: 178 VSCTAIISGYAQLGLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSH 237

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +R  L   V +  SL+DMY+KC   G+++ +RK+F+ M    V+SW A++ GY +  G+
Sbjct: 238 VLRCELPFYVVLQNSLIDMYSKC---GNLNYARKIFNNMPVRTVISWNAMLVGYSKH-GK 293

Query: 369 DKEAVKLFSDMI-QGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCV 425
             E VKLF  M  + +V P+  TF +VL  C  G L D  +  +++   +  G  ++  +
Sbjct: 294 GIEVVKLFKLMREENKVKPDSVTFLAVLSGCSHGGLEDKGL--EMFDEMMNGGDEIEAGI 351

Query: 426 GN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            +   +I +  R+GR+E+A +  + + FE     + +++ A
Sbjct: 352 EHYGCVIDLLGRAGRVEEAFELIKKMPFEPTAAIWGSLLGA 392



 Score =  185 bits (469), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 124/392 (31%), Positives = 210/392 (53%), Gaps = 14/392 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           ++ ++  C N   V  G  ++  ++K  Y    V +   LI ++ K    L  A  VFD+
Sbjct: 13  YNMLLNECVNKRAVREGQRVHAHMIKTCYLPP-VYLSTRLIILYTKCEC-LGCARHVFDE 70

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M E+N V WT MI+  +Q G   +A+ LF+ M+ S   P+ FT + V+S+C+    F  G
Sbjct: 71  MRERNVVSWTAMISGYSQRGFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELG 130

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+HS   +      + VG SL+DMYAK    G + ++R VF+ + + +V+S TAII+GY
Sbjct: 131 RQIHSHIFKRNYENHIFVGSSLLDMYAKA---GRIHEARGVFECLPERDVVSCTAIISGY 187

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q  G D+EA++LF  + +  ++ N+ T+AS+L A   L   +  +QV++H ++      
Sbjct: 188 AQL-GLDEEALELFCRLQREGMSSNYVTYASLLTALSGLAALDHGKQVHSHVLRCELPFY 246

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN---LNSEKAFELLHE 479
             + NSLI MY++ G +  ARK F ++  + ++S+N M+  Y+K+   +   K F+L+  
Sbjct: 247 VVLQNSLIDMYSKCGNLNYARKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMR- 305

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRC 537
            E+  V   + TF ++LSG S  G   KG ++   ++  G E    I  Y  +I +  R 
Sbjct: 306 -EENKVKPDSVTFLAVLSGCSHGGLEDKGLEMFDEMMNGGDEIEAGIEHYGCVIDLLGRA 364

Query: 538 ANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
             VE AF++ K+M  +     W S++     H
Sbjct: 365 GRVEEAFELIKKMPFEPTAAIWGSLLGACRVH 396



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 180/402 (44%), Gaps = 45/402 (11%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M +    P+  T++ +L SC     F LG+ +HS + +   E +  + 
Sbjct: 90  GFASEALHLFVQMLRSDTEPNEFTFATVLSSCTGFSGFELGRQIHSHIFKRNYENHIFVG 149

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SL+ +Y+K G ++EA  +F+ +  +RD+VS +++IS Y   G   +A+ +F  +   G 
Sbjct: 150 SSLLDMYAKAGRIHEARGVFECL-PERDVVSCTAIISGYAQLGLDEEALELFCRLQREGM 208

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             N   +++++ A S    +  G  ++  +L+C      V +  +LIDM+ K   +L  A
Sbjct: 209 SSNYVTYASLLTALSGLAALDHGKQVHSHVLRC-ELPFYVVLQNSLIDMYSKCG-NLNYA 266

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSE 295
            K+F+ M  +  + W  M+   ++ G   + ++LF  M     + PD  T   V+S CS 
Sbjct: 267 RKIFNNMPVRTVISWNAMLVGYSKHGKGIEVVKLFKLMREENKVKPDSVTFLAVLSGCSH 326

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
             L   G ++    +  G  ++     + ++ Y  C +D                     
Sbjct: 327 GGLEDKGLEMFDEMMNGGDEIE-----AGIEHYG-CVID--------------------- 359

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
                  +   GR +EA +L   M      P    + S+L AC    ++N+ E V    +
Sbjct: 360 ------LLGRAGRVEEAFELIKKM---PFEPTAAIWGSLLGACRVHSNTNIGEFVGCRLL 410

Query: 416 KRGRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKNLV 455
           +      +  GN +I  ++YA +GR ED R   E + EK ++
Sbjct: 411 E---IEPENAGNYVILSNLYASAGRWEDVRNVRELMMEKAVI 449


>gi|356506811|ref|XP_003522169.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 751

 Score =  486 bits (1250), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 236/631 (37%), Positives = 381/631 (60%), Gaps = 5/631 (0%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L+   K+FDKM+++N V WT +IT        ++A+  F  M + G +  +F LS V+ 
Sbjct: 125 ELDYTIKLFDKMSQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQ 184

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ L     G Q+H   ++ G   ++ VG +L DMY+KC   G + D+ K F+ M   +
Sbjct: 185 ACTSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKC---GELSDACKAFEEMPCKD 241

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            + WT++I G+V++G   K+A+  +  M+   V  +     S L AC  L  S+  + ++
Sbjct: 242 AVLWTSMIDGFVKNGDF-KKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLH 300

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNS 470
              +K G   +  +GN+L  MY++SG M  A   F+   +  ++VS   ++D Y +    
Sbjct: 301 ATILKLGFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQI 360

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           EKA     ++   G+  + +TF SL+   ++   +  G Q+H +++K  F+ +  + + L
Sbjct: 361 EKALSTFVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTL 420

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MY +C   + + Q+F E+E+ + I+W +++  F++HG    A+E F  M+  G+KPN 
Sbjct: 421 VDMYGKCGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNA 480

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T++ +L  CSHAG++ +G  +F SM   +G+V + EHY+C++DLLGR+G L EA +FI 
Sbjct: 481 VTFVNLLKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFIN 540

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           +MP   +V  W +FLGAC++HGD E  K AA+ +++ +P++  AH+LLSN+YA    WE 
Sbjct: 541 NMPFEPNVFGWCSFLGACKIHGDMERAKFAADKLMKLEPENSGAHVLLSNIYAKEKQWED 600

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V ++RK +K+ N+ K  G SW++  NK H F V + SHP+  EIY +LD L  +IK  GY
Sbjct: 601 VQSLRKMIKDGNMNKLPGYSWVDIRNKTHVFGVEDWSHPQKKEIYEKLDNLLDQIKRIGY 660

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +P T  VL ++++  K + L  HSE+IAVAF L++     PI V KNLRVC DCH+A+K+
Sbjct: 661 VPQTESVLIDMDDNLKEKLLHYHSERIAVAFSLLTCPTGMPIIVKKNLRVCSDCHSALKF 720

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS VT R I++RD +RFHH  +G CSC DYW
Sbjct: 721 ISKVTERNIIVRDISRFHHFSNGSCSCGDYW 751



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 259/501 (51%), Gaps = 10/501 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  T + L+++  R++  + GK +H++L R    PN+ + N  ++LYSKCG+L+   K+F
Sbjct: 74  DTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKCGELDYTIKLF 133

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M ++R++VSW+S+I+ + +  +  +A+  F +M   G    ++  S+V++AC++   +
Sbjct: 134 DKM-SQRNMVSWTSIITGFAHNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAI 192

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G  ++  ++KCG F  ++ VG  L DM+ K   +L  A K F++M  K+ V WT MI 
Sbjct: 193 QFGTQVHCLVVKCG-FGCELFVGSNLTDMYSKCG-ELSDACKAFEEMPCKDAVLWTSMID 250

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              + G  + A+  ++ M+      D+  L   +SACS L+  + GK LH+  ++ G   
Sbjct: 251 GFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEY 310

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAIITGYVQSGGRDKEAVKL 375
           +  +G +L DMY+K    G +  +  VF    D  +++S TAII GYV+    +K A+  
Sbjct: 311 ETFIGNALTDMYSK---SGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEK-ALST 366

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F D+ +  + PN FTF S++KAC N        Q++   VK     D  V ++L+ MY +
Sbjct: 367 FVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGK 426

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G  + + + F+ +   + +++NT+V  ++++     A E  + +   G+  +A TF +L
Sbjct: 427 CGLFDHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNL 486

Query: 496 LSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DR 553
           L G S  G +  G    + + K  G       Y+ +I +  R   ++ A      M  + 
Sbjct: 487 LKGCSHAGMVEDGLNYFSSMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMPFEP 546

Query: 554 NVISWTSMITGFAKHGFAARA 574
           NV  W S +     HG   RA
Sbjct: 547 NVFGWCSFLGACKIHGDMERA 567



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/411 (30%), Positives = 215/411 (52%), Gaps = 24/411 (5%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           L D  T++ ++   +  +    GKQLH+  IR G   +  +    +++Y+KC   G +D 
Sbjct: 72  LSDTKTVAHLIQTYARTKELNKGKQLHAMLIRGGCLPNTFLSNHFLNLYSKC---GELDY 128

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKAC 398
           + K+FD+M   N++SWT+IITG+  +  R +EA+  F  M I+G++A   F  +SVL+AC
Sbjct: 129 TIKLFDKMSQRNMVSWTSIITGFAHN-SRFQEALSSFCQMRIEGEIA-TQFALSSVLQAC 186

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +L       QV+   VK G   +  VG++L  MY++ G + DA KAFE +  K+ V + 
Sbjct: 187 TSLGAIQFGTQVHCLVVKCGFGCELFVGSNLTDMYSKCGELSDACKAFEEMPCKDAVLWT 246

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           +M+D + KN + +KA     ++    V    +   S LS  S++ A   G+ +HA I+K 
Sbjct: 247 SMIDGFVKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKL 306

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEI 577
           GFE    I NAL  MYS+  ++ +A  VF+   D  +++S T++I G+ +     +AL  
Sbjct: 307 GFEYETFIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALST 366

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY------AC 631
           F  +   GI+PN  T+ +++ AC++   +  G +        HG V +          + 
Sbjct: 367 FVDLRRRGIEPNEFTFTSLIKACANQAKLEHGSQ-------LHGQVVKFNFKRDPFVSST 419

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
           +VD+ G+ G    +++    +  + D + W T +G    HG   LG++A E
Sbjct: 420 LVDMYGKCGLFDHSIQLFDEIE-NPDEIAWNTLVGVFSQHG---LGRNAIE 466



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 211/429 (49%), Gaps = 24/429 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++ R Q+A+ +   M  +G        S +L++C        G  VH L+ +        
Sbjct: 153 HNSRFQEALSSFCQMRIEGEIATQFALSSVLQACTSLGAIQFGTQVHCLVVKCGFGCELF 212

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L  +YSKCG+L++A K F+ M  K D V W+SMI  +V  G    A+  +++M+  
Sbjct: 213 VGSNLTDMYSKCGELSDACKAFEEMPCK-DAVLWTSMIDGFVKNGDFKKALTAYMKMVTD 271

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               +++   + + ACS  +  + G  ++  +LK G F+ +  +G AL DM+ K S D+ 
Sbjct: 272 DVFIDQHVLCSTLSACSALKASSFGKSLHATILKLG-FEYETFIGNALTDMYSK-SGDMV 329

Query: 235 SAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           SA  VF   ++  + V  T +I    ++     A+  F+D+   G  P+ FT + ++ AC
Sbjct: 330 SASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRRRGIEPNEFTFTSLIKAC 389

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +       G QLH   ++     D  V  +LVDMY KC   G  D S ++FD + + + +
Sbjct: 390 ANQAKLEHGSQLHGQVVKFNFKRDPFVSSTLVDMYGKC---GLFDHSIQLFDEIENPDEI 446

Query: 354 SWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDS----N 405
           +W  ++  + Q G GR+  A++ F+ MI   + PN  TF ++LK C   G + D     +
Sbjct: 447 AWNTLVGVFSQHGLGRN--AIETFNGMIHRGLKPNAVTFVNLLKGCSHAGMVEDGLNYFS 504

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAY 464
             E++Y    K       CV    I +  R+G++++A     ++ FE N+  + + + A 
Sbjct: 505 SMEKIYGVVPKEEHY--SCV----IDLLGRAGKLKEAEDFINNMPFEPNVFGWCSFLGAC 558

Query: 465 AKNLNSEKA 473
             + + E+A
Sbjct: 559 KIHGDMERA 567



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 80/333 (24%), Positives = 150/333 (45%), Gaps = 17/333 (5%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G  +KA+     M       D       L +C   +    GK +H+ + +   E  +
Sbjct: 253 VKNGDFKKALTAYMKMVTDDVFIDQHVLCSTLSACSALKASSFGKSLHATILKLGFEYET 312

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I N+L  +YSK GD+  A+ +F+   +   IVS +++I  YV   +   A+  FV++  
Sbjct: 313 FIGNALTDMYSKSGDMVSASNVFQIHSDCISIVSLTAIIDGYVEMDQIEKALSTFVDLRR 372

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PNE+ F+++I+AC+N   +  G  ++G ++K   F  D  V   L+DM+ K  +  
Sbjct: 373 RGIEPNEFTFTSLIKACANQAKLEHGSQLHGQVVKFN-FKRDPFVSSTLVDMYGKCGL-F 430

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           + + ++FD++   + + W  ++   +Q G  R+AI  F  MI  G  P+  T   ++  C
Sbjct: 431 DHSIQLFDEIENPDEIAWNTLVGVFSQHGLGRNAIETFNGMIHRGLKPNAVTFVNLLKGC 490

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM- 347
           S   +   G    S       +++   G    + +  C +D     G + ++    + M 
Sbjct: 491 SHAGMVEDGLNYFS-------SMEKIYGVVPKEEHYSCVIDLLGRAGKLKEAEDFINNMP 543

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
            + NV  W + +      G  D E  K  +D +
Sbjct: 544 FEPNVFGWCSFLGACKIHG--DMERAKFAADKL 574


>gi|108708629|gb|ABF96424.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586550|gb|EAZ27214.1| hypothetical protein OsJ_11153 [Oryza sativa Japonica Group]
          Length = 748

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/688 (36%), Positives = 406/688 (59%), Gaps = 14/688 (2%)

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           + + F  ++RA       A    ++   L+ G    D     AL+  +++ G V    AY
Sbjct: 70  DAFTFPPLLRAAQGPGTAAQ---LHACALRLGLLRGDAFASGALVHAYLRFGRV--RDAY 124

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           + FD+M  ++   W  M++   +     +A+ LF  M++ G   D  T+S V+  C  L 
Sbjct: 125 RAFDEMRHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLG 184

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
                  +H +A++ GL  ++ V  +++D+Y K    G +++ RKVFD M   ++++W +
Sbjct: 185 DRALALAMHLYAVKHGLDDELFVCNAMIDVYGKL---GMLEEVRKVFDGMSSRDLVTWNS 241

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           II+G+ Q GG+   AV++F  M    V+P+  T  S+  A     D      V+ + V+R
Sbjct: 242 IISGHEQ-GGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRR 300

Query: 418 GRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-LNSEKAFE 475
           G  + D + GN+++ MYA+  ++E A++ F+S+  ++ VS+NT++  Y +N L SE    
Sbjct: 301 GWDVGDIIAGNAIVDMYAKLSKIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHV 360

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
             H  +  G+     TF S+L   S +GA+ +G ++HA  IK+G   +  +   +I +Y+
Sbjct: 361 YDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYA 420

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  ++ A  +F++   R+   W ++I+G   HG  A+AL +F +M  +GI P+ +T+++
Sbjct: 421 KCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKALSLFSQMQQEGISPDHVTFVS 480

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L+ACSHAGL+ +G   F  M   +GI    +HYACMVD+ GR+G L +A +FIR+MP+ 
Sbjct: 481 LLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDMFGRAGQLDDAFDFIRNMPIK 540

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            D  +W   LGACR+HG+ E+GK A++ + E DP++   ++L+SN+YA  G W+ V  +R
Sbjct: 541 PDSAIWGALLGACRIHGNVEMGKVASQNLFELDPKNVGYYVLMSNMYAKVGKWDGVDEVR 600

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETS--HPKTLEIYAELDQLALKIKEFGYLPD 773
             ++ +NL K  G S IE    V+ F+ G     HP+  EI  EL  L  KI+  GY+PD
Sbjct: 601 SLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQMNIHPQHEEIQRELLDLLAKIRSLGYVPD 660

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +FVL ++EE++K Q L  HSE++A+AFG+I+T    P+ ++KNLRVCGDCH A KYIS 
Sbjct: 661 YSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPRTPLHIYKNLRVCGDCHNATKYISK 720

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T REI++RDSNRFHH KDG CSC D+W
Sbjct: 721 ITEREIIVRDSNRFHHFKDGYCSCGDFW 748



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 209/407 (51%), Gaps = 21/407 (5%)

Query: 45  PLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSL 103
           P  N ++  L  + R  +A+     M  +G   D  T S +L  C+   +  L   +H  
Sbjct: 136 PAWNAMLSGLCRNARAAEAVGLFGRMVMEGVAGDAVTVSSVLPMCVLLGDRALALAMHLY 195

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
             +  L+    + N++I +Y K G L E  K+F  M + RD+V+W+S+IS +   G+   
Sbjct: 196 AVKHGLDDELFVCNAMIDVYGKLGMLEEVRKVFDGM-SSRDLVTWNSIISGHEQGGQVAS 254

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+ MF  M + G  P+     ++  A +   ++  G  ++ ++++ G+   D+  G A++
Sbjct: 255 AVEMFCGMRDSGVSPDVLTLLSLASAIAQCGDICGGRSVHCYMVRRGWDVGDIIAGNAIV 314

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPD 282
           DM+ K S  +E+A ++FD M  ++ V W  +IT   Q G   +AI ++  M    G  P 
Sbjct: 315 DMYAKLS-KIEAAQRMFDSMPVRDAVSWNTLITGYMQNGLASEAIHVYDHMQKHEGLKPI 373

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
           + T   V+ A S L     G ++H+ +I+TGL LDV VG  ++D+YAKC   G +D++  
Sbjct: 374 QGTFVSVLPAYSHLGALQQGTRMHALSIKTGLNLDVYVGTCVIDLYAKC---GKLDEAML 430

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GN 400
           +F++    +   W A+I+G V   G   +A+ LFS M Q  ++P+H TF S+L AC    
Sbjct: 431 LFEQTPRRSTGPWNAVISG-VGVHGHGAKALSLFSQMQQEGISPDHVTFVSLLAACSHAG 489

Query: 401 LLDS-----NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           L+D      N+ +  Y   +K       C    ++ M+ R+G+++DA
Sbjct: 490 LVDQGRNFFNMMQTAY--GIKPIAKHYAC----MVDMFGRAGQLDDA 530



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/457 (26%), Positives = 228/457 (49%), Gaps = 11/457 (2%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+  Y + G + +A + F  M   RD+ +W++M+S      +  +A+ +F  M+  G 
Sbjct: 108 GALVHAYLRFGRVRDAYRAFDEM-RHRDVPAWNAMLSGLCRNARAAEAVGLFGRMVMEGV 166

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +    S+V+  C    + A+   ++ + +K G  D ++ V  A+ID++ K  + LE  
Sbjct: 167 AGDAVTVSSVLPMCVLLGDRALALAMHLYAVKHG-LDDELFVCNAMIDVYGKLGM-LEEV 224

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            KVFD M+ ++ V W  +I+   Q G    A+ +F  M  SG  PD  TL  + SA ++ 
Sbjct: 225 RKVFDGMSSRDLVTWNSIISGHEQGGQVASAVEMFCGMRDSGVSPDVLTLLSLASAIAQC 284

Query: 297 ELFTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                G+ +H + +R G  + D+  G ++VDMYAK +    ++ ++++FD M   + +SW
Sbjct: 285 GDICGGRSVHCYMVRRGWDVGDIIAGNAIVDMYAKLS---KIEAAQRMFDSMPVRDAVSW 341

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
             +ITGY+Q+ G   EA+ ++  M + + + P   TF SVL A  +L       +++  +
Sbjct: 342 NTLITGYMQN-GLASEAIHVYDHMQKHEGLKPIQGTFVSVLPAYSHLGALQQGTRMHALS 400

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K G  LD  VG  +I +YA+ G++++A   FE    ++   +N ++     + +  KA 
Sbjct: 401 IKTGLNLDVYVGTCVIDLYAKCGKLDEAMLLFEQTPRRSTGPWNAVISGVGVHGHGAKAL 460

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISM 533
            L  +++  G+     TF SLL+  S  G + +G      +  + G +     Y  ++ M
Sbjct: 461 SLFSQMQQEGISPDHVTFVSLLAACSHAGLVDQGRNFFNMMQTAYGIKPIAKHYACMVDM 520

Query: 534 YSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG 569
           + R   ++ AF   + M  + +   W +++     HG
Sbjct: 521 FGRAGQLDDAFDFIRNMPIKPDSAIWGALLGACRIHG 557


>gi|296089060|emb|CBI38763.3| unnamed protein product [Vitis vinifera]
          Length = 719

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 272/745 (36%), Positives = 406/745 (54%), Gaps = 101/745 (13%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N++I  Y+  G LNEA K+F      R  ++WSS+IS Y   G  V+A+ +F EM   G 
Sbjct: 76  NTMIGAYANSGRLNEARKLFYET-PIRSCITWSSLISGYCRYGCDVEALELFWEMQYEGE 134

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN++ + +V+R CS    +  G  I+   +K   FDS+  V   L+DM+ K    LE+ 
Sbjct: 135 RPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKT-QFDSNAFVVTGLVDMYAKCKCILEAE 193

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           Y       ++N V WT M+T  +Q G    AI  F DM   G   ++FT   +++AC  +
Sbjct: 194 YLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSI 253

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G Q+H   +R+G   +V VG +LVDMY+KC   G + ++R++ + M   + +SW 
Sbjct: 254 SACGFGAQVHGCIVRSGFGANVFVGSALVDMYSKC---GDLSNARRMLETMEVDDPVSWN 310

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++I G V+  G  +EA+ LF  M    +  + FT+ S+                      
Sbjct: 311 SMIVGCVRQ-GLGEEALSLFRIMHLRHMKIDEFTYPSL---------------------- 347

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                   V N+L+ MYA+ G  + A   FE + +K+++S+ ++V     N + E+A  L
Sbjct: 348 --------VNNALVDMYAKRGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRL 399

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             E+   G+       A++LS                            + N+L+SMY++
Sbjct: 400 FCEMRIMGIHPDQIVIAAVLSA---------------------------LDNSLVSMYAK 432

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  +E A +VF  ME ++VI+WT++I G+A++G                           
Sbjct: 433 CGCIEDANKVFDSMEIQDVITWTALIVGYAQNG--------------------------- 465

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
                       G  +F+SM + +GI    EHYACM+DLLGRSG L EA E +  M +  
Sbjct: 466 -----------RGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQP 514

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  VW+  L ACRVHG+ ELG+ AA  + E +P++   ++LLSNLY++AG WE  A  R+
Sbjct: 515 DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRR 574

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            MK R + KE GCSWIE  +KVH+F   + SHP+T EIY+++D++ + IKE GY+PD NF
Sbjct: 575 LMKLRGVSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNF 634

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
            LH+++EE K   L  HSEK+AVAFGL++     PIR+FKNLR+CGDCHTA+KY+S V  
Sbjct: 635 ALHDMDEEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFH 694

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           R ++LRDSN FHH ++G CSC+DYW
Sbjct: 695 RHVILRDSNCFHHFREGACSCSDYW 719



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 255/552 (46%), Gaps = 76/552 (13%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P+  T+  +L+ C        GK +H+   +++ + N+ ++  L+ +Y+KC  
Sbjct: 129 MQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKCKC 188

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EA  +F+   +KR+ V W++M++ Y   G    AI  F +M   G   N++ F +++ 
Sbjct: 189 ILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSILT 248

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC +      G  ++G +++ G F ++V VG AL+DM+ K   DL +A ++ + M   + 
Sbjct: 249 ACGSISACGFGAQVHGCIVRSG-FGANVFVGSALVDMYSKCG-DLSNARRMLETMEVDDP 306

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  MI  C + G   +A+ LF  M L     D FT   +V+                 
Sbjct: 307 VSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNN---------------- 350

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
                         +LVDMYAK    G  D +  VF++M D +V+SWT+++TG V +G  
Sbjct: 351 --------------ALVDMYAK---RGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSY 393

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           + EA++LF +M    + P+    A+VL A                           + NS
Sbjct: 394 E-EALRLFCEMRIMGIHPDQIVIAAVLSA---------------------------LDNS 425

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L+SMYA+ G +EDA K F+S+  ++++++  ++  YA+N      F+ + E+     G  
Sbjct: 426 LVSMYAKCGCIEDANKVFDSMEIQDVITWTALIVGYAQNGRGRDYFQSMEEVYGIKPGPE 485

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE----AAF 544
            Y     L G S     GK  +    + +   + +  ++ AL++      NVE    AA 
Sbjct: 486 HYACMIDLLGRS-----GKLMEAKELLNQMAVQPDATVWKALLAACRVHGNVELGERAAN 540

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI-KPNGITYIAVLSACSHA 603
            +F E+E +N + +  +   ++  G    A +    M   G+ K  G ++I + S     
Sbjct: 541 NLF-ELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEMSSKVHR- 598

Query: 604 GLISEGWKHFRS 615
             +SE   H R+
Sbjct: 599 -FMSEDRSHPRT 609



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 191/423 (45%), Gaps = 74/423 (17%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   KAI     M  +G   +  T+  +L +C        G  VH  + RS    N  
Sbjct: 217 QNGDGHKAIECFRDMRGEGIECNQFTFPSILTACGSISACGFGAQVHGCIVRSGFGANVF 276

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKCGDL+ A ++ ++M    D VSW+SMI   V +G   +A+ +F      
Sbjct: 277 VGSALVDMYSKCGDLSNARRMLETM-EVDDPVSWNSMIVGCVRQGLGEEALSLF------ 329

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
                                     I++   +K   F     V  AL+DM+ K     +
Sbjct: 330 -------------------------RIMHLRHMKIDEFTYPSLVNNALVDMYAKRGY-FD 363

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A+ VF+KMT+K+ + WT ++T C   G   +A+RLF +M + G  PD+  ++ V+SA  
Sbjct: 364 YAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSALD 423

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                                       SLV MYAKC   G ++D+ KVFD M   +V++
Sbjct: 424 N---------------------------SLVSMYAKC---GCIEDANKVFDSMEIQDVIT 453

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT-FASVLKACGNLLDSNVAEQVYTH 413
           WTA+I GY Q+ GR ++  +   ++   +  P H+     +L   G L+++   E +   
Sbjct: 454 WTALIVGYAQN-GRGRDYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAK--ELLNQM 510

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE---KNLVSYNTMVDAYAKNLNS 470
           AV+     D  V  +L++     G +E   +A  +LFE   KN V Y  + + Y+     
Sbjct: 511 AVQP----DATVWKALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKW 566

Query: 471 EKA 473
           E+A
Sbjct: 567 EEA 569



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 95/380 (25%), Positives = 176/380 (46%), Gaps = 54/380 (14%)

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           +TF+   K C  L  + +   +       G        N ++S  ++ GR++DARK F+ 
Sbjct: 9   YTFSR--KVCHQLEHTELNHHIRRFVNSCGTVHSSSDSNWVLSNLSKCGRVDDARKLFDV 66

Query: 449 LFEKNLVSYNTMVDAYAKN--LNSEK-----------------------------AFELL 477
           + +++  S+NTM+ AYA +  LN  +                             A EL 
Sbjct: 67  MPDRDECSWNTMIGAYANSGRLNEARKLFYETPIRSCITWSSLISGYCRYGCDVEALELF 126

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            E++  G   + +T+ S+L   S    + KG+QIHA  IK+ F+SN  +   L+ MY++C
Sbjct: 127 WEMQYEGERPNQFTWGSVLRVCSMYVLLEKGKQIHAHAIKTQFDSNAFVVTGLVDMYAKC 186

Query: 538 ANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
             +  A  +F+   D RN + WT+M+TG++++G   +A+E F  M  +GI+ N  T+ ++
Sbjct: 187 KCILEAEYLFELAPDKRNHVLWTAMVTGYSQNGDGHKAIECFRDMRGEGIECNQFTFPSI 246

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA------CMVDLLGRSGSLTEALEFIR 650
           L+AC        G +        HG + R    A       +VD+  + G L+ A   + 
Sbjct: 247 LTACGSISACGFGAQ-------VHGCIVRSGFGANVFVGSALVDMYSKCGDLSNARRMLE 299

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELG------KHAAEMILEQDPQDPAAHILLSNLYAS 704
           +M +  D + W + +  C   G  E         H   M +++       +  L ++YA 
Sbjct: 300 TMEVD-DPVSWNSMIVGCVRQGLGEEALSLFRIMHLRHMKIDEFTYPSLVNNALVDMYAK 358

Query: 705 AGHWEYVANIRKRMKERNLI 724
            G+++Y  ++ ++M ++++I
Sbjct: 359 RGYFDYAFDVFEKMTDKDVI 378


>gi|356513929|ref|XP_003525660.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 736

 Score =  485 bits (1249), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 259/699 (37%), Positives = 404/699 (57%), Gaps = 45/699 (6%)

Query: 202 IYGFLLKCG-----YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK--NTVGWTLM 254
           I+  ++K G     +  S +   CAL       S DL  A  +F  +  +  N   W  +
Sbjct: 44  IHSLIIKSGLHNTLFAQSKLIEFCAL-----SPSRDLSYALSLFHSIHHQPPNIFIWNTL 98

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I   +    P  ++ LF  M+ SG  P+  T   +  +C++ +     KQLH+ A++  L
Sbjct: 99  IRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALKLAL 158

Query: 315 ALDVCVGCSLVDMYAKC----------------------------TVDGSVDDSRKVFDR 346
            L   V  SL+ MY++                               +G VDD+R++FD 
Sbjct: 159 HLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRLFDE 218

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           +   +V+SW A+I GYVQSG R +EA+  F+ M +  V+PN  T  SVL ACG+L    +
Sbjct: 219 IPAKDVVSWNAMIAGYVQSG-RFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSLEL 277

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + + +    RG   +  + N+L+ MY++ G +  ARK F+ + +K+++ +NTM+  Y  
Sbjct: 278 GKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGYCH 337

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK----SGFES 522
               E+A  L   +    V  +  TF ++L   +S+GA+  G+ +HA I K    +G  +
Sbjct: 338 LSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVHAYIDKNLKGTGNVN 397

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           N  ++ ++I MY++C  VE A QVF+ M  R++ SW +MI+G A +G A RAL +F +M+
Sbjct: 398 NVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLASWNAMISGLAMNGHAERALGLFEEMI 457

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
            +G +P+ IT++ VLSAC+ AG +  G ++F SM  ++GI  +++HY CM+DLL RSG  
Sbjct: 458 NEGFQPDDITFVGVLSACTQAGFVELGHRYFSSMNKDYGISPKLQHYGCMIDLLARSGKF 517

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA   + +M +  D  +W + L ACR+HG  E G++ AE + E +P++  A++LLSN+Y
Sbjct: 518 DEAKVLMGNMEMEPDGAIWGSLLNACRIHGQVEFGEYVAERLFELEPENSGAYVLLSNIY 577

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           A AG W+ VA IR ++ ++ + K  GC+ IE D  VH+F VG+  HP++  I+  LD++ 
Sbjct: 578 AGAGRWDDVAKIRTKLNDKGMKKVPGCTSIEIDGVVHEFLVGDKFHPQSENIFRMLDEVD 637

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
             ++E G++PDT+ VL++++EE K   L QHSEK+A+AFGLIST     IR+ KNLRVC 
Sbjct: 638 RLLEETGFVPDTSEVLYDMDEEWKEGALTQHSEKLAIAFGLISTKPGSTIRIVKNLRVCR 697

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CH+A K IS +  REI+ RD NRFHH KDG CSCND W
Sbjct: 698 NCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDRW 736



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 146/536 (27%), Positives = 245/536 (45%), Gaps = 53/536 (9%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL--YSKCGDLNE 131
           NHP L+    LL  C    +    K +HSL+ +S L       + LI     S   DL+ 
Sbjct: 25  NHPHLN----LLAKCPDIPSL---KQIHSLIIKSGLHNTLFAQSKLIEFCALSPSRDLSY 77

Query: 132 ANKIFKSMGNKR-DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
           A  +F S+ ++  +I  W+++I ++        ++H+F +ML  G  PN + F ++ ++C
Sbjct: 78  ALSLFHSIHHQPPNIFIWNTLIRAHSLTPTPTSSLHLFSQMLHSGLYPNSHTFPSLFKSC 137

Query: 191 SNTENVAIGHIIYGFLLKCGY--------------------------FDS----DVCVGC 220
           + ++       ++   LK                             FD     D     
Sbjct: 138 AKSKATHEAKQLHAHALKLALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFT 197

Query: 221 ALIDMFV-KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
           ALI  +V +G VD   A ++FD++  K+ V W  MI    Q G   +A+  F  M  +  
Sbjct: 198 ALITGYVSEGHVD--DARRLFDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADV 255

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            P++ T+  V+SAC  L     GK + SW    G   ++ +  +LVDMY+KC   G +  
Sbjct: 256 SPNQSTMVSVLSACGHLRSLELGKWIGSWVRDRGFGKNLQLVNALVDMYSKC---GEIGT 312

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +RK+FD M D +V+ W  +I GY      + EA+ LF  M++  V PN  TF +VL AC 
Sbjct: 313 ARKLFDGMEDKDVILWNTMIGGYCHLSLYE-EALVLFEVMLRENVTPNDVTFLAVLPACA 371

Query: 400 NLLDSNVAEQVYTHAVKR----GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           +L   ++ + V+ +  K     G   +  +  S+I MYA+ G +E A + F S+  ++L 
Sbjct: 372 SLGALDLGKWVHAYIDKNLKGTGNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMGSRSLA 431

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           S+N M+   A N ++E+A  L  E+ + G      TF  +LS  +  G +  G +  + +
Sbjct: 432 SWNAMISGLAMNGHAERALGLFEEMINEGFQPDDITFVGVLSACTQAGFVELGHRYFSSM 491

Query: 516 IKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
            K  G       Y  +I + +R    + A  +   ME + +   W S++     HG
Sbjct: 492 NKDYGISPKLQHYGCMIDLLARSGKFDEAKVLMGNMEMEPDGAIWGSLLNACRIHG 547



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 110/415 (26%), Positives = 193/415 (46%), Gaps = 47/415 (11%)

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV-FDRMLDH---NVMSWT 356
           S KQ+HS  I++GL   +     L++    C +  S D S  +     + H   N+  W 
Sbjct: 40  SLKQIHSLIIKSGLHNTLFAQSKLIEF---CALSPSRDLSYALSLFHSIHHQPPNIFIWN 96

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I  +  +      ++ LFS M+   + PN  TF S+ K+C     ++ A+Q++ HA+K
Sbjct: 97  TLIRAHSLTP-TPTSSLHLFSQMLHSGLYPNSHTFPSLFKSCAKSKATHEAKQLHAHALK 155

Query: 417 RGRALDDCVGNSLISMYARSGRM-------------------------------EDARKA 445
               L   V  SLI MY++ G +                               +DAR+ 
Sbjct: 156 LALHLHPHVHTSLIHMYSQVGELRHARLVFDKSTLRDAVSFTALITGYVSEGHVDDARRL 215

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F+ +  K++VS+N M+  Y ++   E+A      +++  V  +  T  S+LS    + ++
Sbjct: 216 FDEIPAKDVVSWNAMIAGYVQSGRFEEALACFTRMQEADVSPNQSTMVSVLSACGHLRSL 275

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             G+ I + +   GF  N  + NAL+ MYS+C  +  A ++F  MED++VI W +MI G+
Sbjct: 276 ELGKWIGSWVRDRGFGKNLQLVNALVDMYSKCGEIGTARKLFDGMEDKDVILWNTMIGGY 335

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEH---- 620
                   AL +F  ML + + PN +T++AVL AC+  G +  G W H  +  D++    
Sbjct: 336 CHLSLYEEALVLFEVMLRENVTPNDVTFLAVLPACASLGALDLGKWVH--AYIDKNLKGT 393

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           G V  +  +  ++ +  + G +  A +  RSM  S  +  W   +    ++G  E
Sbjct: 394 GNVNNVSLWTSIIVMYAKCGCVEVAEQVFRSMG-SRSLASWNAMISGLAMNGHAE 447


>gi|48716903|dbj|BAD23598.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
          Length = 755

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/764 (35%), Positives = 433/764 (56%), Gaps = 51/764 (6%)

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
           +LEP  +  N  I+ + + G + +A ++F +M  +R   ++++M++ Y   G+   A  +
Sbjct: 33  RLEPEVIRSNKAITAHMRAGRVADAERLFAAM-PRRSTSTYNAMLAGYSANGRLPLAASL 91

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F  +      P+ Y ++ ++ A + + ++A            G FD          ++ +
Sbjct: 92  FRAIPR----PDNYSYNTLLHALAVSSSLADAR---------GLFDEMPVRDSVTYNVMI 138

Query: 228 K-----GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-----LDMILS 277
                 G V L   Y  FD   EK+ V W  M+    + G   +A  LF      D+I  
Sbjct: 139 SSHANHGLVSLARHY--FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISW 196

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
             L   +   G +S   EL     G+ + SW I             +V  YA+    G +
Sbjct: 197 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNI-------------MVSGYAR---RGDM 240

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            ++R++FD     +V +WTA+++GY Q+G  + EA ++F  M +      +   A+ ++ 
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE-EARRVFDAMPERNAVSWNAMVAAYIQR 299

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
              ++D   A++++     R  A      N++++ YA++G +E+A+  F+++ +K+ VS+
Sbjct: 300 --RMMDE--AKELFNMMPCRNVA----SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSW 351

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+ AY++   SE+  +L  E+   G   +   FA +LS  + I A+  G Q+H R+I+
Sbjct: 352 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 411

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +G+     + NAL++MY +C N+E A   F+EME+R+V+SW +MI G+A+HGF   ALEI
Sbjct: 412 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 471

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F  M     KP+ IT + VL+ACSH+GL+ +G  +F SM+ + G+  + EHY CM+DLLG
Sbjct: 472 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 531

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L EA + ++ MP   D  +W   LGA R+H + ELG+ AAE I E +P++   ++L
Sbjct: 532 RAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVL 591

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN+YAS+G W     +R  M+ER + K  G SWIE  NKVH F  G+  HP+  +IYA 
Sbjct: 592 LSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAF 651

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           L+ L +++K+ GY+  T+ VLH++EEE+K   L  HSEK+AVA+G+++    +PIRV KN
Sbjct: 652 LEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKN 711

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVCGDCH A KYIS + GR I+LRDSNRFHH + G CSC DYW
Sbjct: 712 LRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G   +   ++ +L +C        G  +H  L R+       + N+L+++Y KCG+
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 433

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A   F+ M  +RD+VSW++MI+ Y   G   +A+ +F  M      P++     V+ 
Sbjct: 434 MEDARNAFEEM-EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492

Query: 189 ACSNTENVAIG 199
           ACS++  V  G
Sbjct: 493 ACSHSGLVEKG 503


>gi|334185551|ref|NP_001189950.1| uncharacterized protein [Arabidopsis thaliana]
 gi|75274240|sp|Q9LUJ2.1|PP249_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g22690
 gi|9279687|dbj|BAB01244.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643145|gb|AEE76666.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 842

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 269/800 (33%), Positives = 456/800 (57%), Gaps = 42/800 (5%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCG---DLNEANKIFKSMGNKRDIVSWSSMISS 154
           K+ H  LT+  L+ +   +  L++   + G    L+ A ++F++  +      ++S+I  
Sbjct: 49  KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y + G   +AI +F+ M+  G  P++Y F   + AC+ +     G  I+G ++K GY   
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY-AK 167

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+ V  +L+  + +   +L+SA KVFD+M+E+N V WT MI    +    +DA+ LF  M
Sbjct: 168 DLFVQNSLVHFYAECG-ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226

Query: 275 IL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           +      P+  T+  V+SAC++LE   +G++++++   +G+ ++  +  +LVDMY KC  
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN- 285

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
             ++D ++++FD     N+    A+ + YV+ G   +EA+ +F+ M+   V P+  +  S
Sbjct: 286 --AIDVAKRLFDEYGASNLDLCNAMASNYVRQG-LTREALGVFNLMMDSGVRPDRISMLS 342

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR------------------ 435
            + +C  L +    +  + + ++ G    D + N+LI MY +                  
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402

Query: 436 -------------SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
                        +G ++ A + FE++ EKN+VS+NT++    +    E+A E+   ++ 
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462

Query: 483 T-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV     T  S+ S    +GA+   + I+  I K+G + +  +   L+ M+SRC + E
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           +A  +F  + +R+V +WT+ I   A  G A RA+E+F  M+  G+KP+G+ ++  L+ACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H GL+ +G + F SM   HG+     HY CMVDLLGR+G L EA++ I  MP+  + ++W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            + L ACRV G+ E+  +AAE I    P+   +++LLSN+YASAG W  +A +R  MKE+
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            L K  G S I+   K H+F  G+ SHP+   I A LD+++ +    G++PD + VL ++
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           +E++K+  L +HSEK+A+A+GLIS++K   IR+ KNLRVC DCH+  K+ S V  REI+L
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFH+I+ GKCSC D+W
Sbjct: 823 RDNNRFHYIRQGKCSCGDFW 842



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 159/572 (27%), Positives = 278/572 (48%), Gaps = 47/572 (8%)

Query: 48  NRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N LI  + + G   +AI     M   G  PD  T+   L +C +SR    G  +H L+ +
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
                +  + NSL+  Y++CG+L+ A K+F  M ++R++VSW+SMI  Y  R    DA+ 
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEM-SERNVVSWTSMICGYARRDFAKDAVD 221

Query: 167 MFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
           +F  M+ +    PN      VI AC+  E++  G  +Y F+   G   +D+ V  AL+DM
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDM 280

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           ++K +  ++ A ++FD+    N      M +   + G  R+A+ +F  M+ SG  PDR +
Sbjct: 281 YMKCNA-IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           +   +S+CS+L     GK  H + +R G      +  +L+DMY KC      D + ++FD
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ---DTAFRIFD 396

Query: 346 RMLDHNVMSWTAIITGYVQSGGRD------------------------------KEAVKL 375
           RM +  V++W +I+ GYV++G  D                              +EA+++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456

Query: 376 FSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           F  M  Q  V  +  T  S+  ACG+L   ++A+ +Y +  K G  LD  +G +L+ M++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           R G  E A   F SL  +++ ++   + A A   N+E+A EL  ++ + G+      F  
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576

Query: 495 LLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME-D 552
            L+  S  G + +G++I   ++K  G       Y  ++ +  R   +E A Q+ ++M  +
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636

Query: 553 RNVISWTSMITGFAKHG------FAARALEIF 578
            N + W S++      G      +AA  +++ 
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668


>gi|125591422|gb|EAZ31772.1| hypothetical protein OsJ_15924 [Oryza sativa Japonica Group]
          Length = 855

 Score =  485 bits (1248), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 284/845 (33%), Positives = 442/845 (52%), Gaps = 84/845 (9%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L+SC         + +H  L    L     + N+L+  Y  CG L++A ++ ++   + +
Sbjct: 27  LRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSCGALSDARRLLRADIKEPN 86

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR------ACSNTENVAI 198
           +++ + M++ Y  +G   DA  +F  M            S   R      +C       +
Sbjct: 87  VITHNIMMNGYAKQGSLSDAEELFDRMPRRDVASWNTLMSDTSRPAGSWMSCGALGCREL 146

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES---------------------- 235
              + G   K  ++  D  V  AL+DMFV+ G VD  S                      
Sbjct: 147 APQLLGLFWKFDFW-GDPDVETALVDMFVRCGYVDFASRLFSQIERPTIFCRNSMLAGYA 205

Query: 236 -------AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
                  A + F+ M E++ V W +MI   +Q G  R+A+ L ++M   G   D  T + 
Sbjct: 206 KLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTS 265

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
            ++AC+ L     GKQLH+  IR+   +D  V  +L+++YAKC   GS  ++++VF+ + 
Sbjct: 266 SLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKC---GSFKEAKRVFNSLQ 322

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           D N +SWT +I G +Q     K +V+LF+ M    +A + F  A+++  C N +D  +  
Sbjct: 323 DRNSVSWTVLIGGSLQYECFSK-SVELFNQMRAELMAIDQFALATLISGCFNRMDLCLGR 381

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q+++  +K G      V NSLIS+YA+ G +++A   F S+ E+++VS+ +M+ AY++  
Sbjct: 382 QLHSLCLKSGHNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDIVSWTSMITAYSQIG 441

Query: 469 NSEKAFELL--------------------HEIEDTG------------VGTSAYTFASLL 496
           N  KA E                      H  E+ G            V     T+ +L 
Sbjct: 442 NIIKAREFFDGMATRNAITWNAMLGAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLF 501

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
            G + IGA   G+QI    +K+G   N  + NA I+MYS+C  +  A ++F  +  ++V+
Sbjct: 502 RGCADIGANKLGDQIIGHTVKAGLILNVSVANAAITMYSKCGRISEAQKLFDLLNGKDVV 561

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW +MITG+++HG   +A + F  ML+ G KP+ I+Y+AVLS CSH+GL+ EG  +F  M
Sbjct: 562 SWNAMITGYSQHGMGKQAAKTFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMM 621

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
              HGI   +EH++CMVDLLGR+G LTEA + I  MP+     VW   L AC++HG+ EL
Sbjct: 622 TRVHGISPGLEHFSCMVDLLGRAGHLTEAKDLIDKMPMKPTAEVWGALLSACKIHGNDEL 681

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            + AA+ + E D  D  +++LL+ +Y+ AG  +  A +RK M+++ + K  G SW+E +N
Sbjct: 682 AELAAKHVFELDSPDSGSYMLLAKIYSDAGKSDDSAQVRKLMRDKGIKKNPGYSWMEVEN 741

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           KVH F   + SHP+ + I  ++D+L  KI   GY+             +  +    HSEK
Sbjct: 742 KVHVFKADDVSHPQVIAIRNKMDELMEKIAHLGYV-----------RTESPRSEIHHSEK 790

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +AVAFG++S     PI + KNLR+CGDCHT IK IS VT RE V+RD  RFHH K G CS
Sbjct: 791 LAVAFGIMSLPAWMPIHIMKNLRICGDCHTVIKLISSVTDREFVIRDGVRFHHFKSGSCS 850

Query: 857 CNDYW 861
           C DYW
Sbjct: 851 CGDYW 855



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 213/440 (48%), Gaps = 49/440 (11%)

Query: 48  NRLIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I  L+  GRV++A+  +  M +KG   D  TY+  L +C R  +   GK +H+ + R
Sbjct: 229 NMMIAALSQSGRVREALGLVVEMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIR 288

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S  + +  + ++LI LY+KCG   EA ++F S+   R+ VSW+ +I   +       ++ 
Sbjct: 289 SLPQIDPYVASALIELYAKCGSFKEAKRVFNSL-QDRNSVSWTVLIGGSLQYECFSKSVE 347

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F +M       +++  + +I  C N  ++ +G  ++   LK G+ +  + V  +LI ++
Sbjct: 348 LFNQMRAELMAIDQFALATLISGCFNRMDLCLGRQLHSLCLKSGH-NRAIVVSNSLISLY 406

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL------------------------- 261
            K   DL++A  VF  M+E++ V WT MIT  +Q+                         
Sbjct: 407 AKCG-DLQNAEFVFSSMSERDIVSWTSMITAYSQIGNIIKAREFFDGMATRNAITWNAML 465

Query: 262 ------GCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
                 G   D ++++  M+      PD  T   +   C+++     G Q+    ++ GL
Sbjct: 466 GAYIQHGAEEDGLKMYSAMLSQKDVTPDWVTYVTLFRGCADIGANKLGDQIIGHTVKAGL 525

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            L+V V  + + MY+KC   G + +++K+FD +   +V+SW A+ITGY Q  G  K+A K
Sbjct: 526 ILNVSVANAAITMYSKC---GRISEAQKLFDLLNGKDVVSWNAMITGYSQH-GMGKQAAK 581

Query: 375 LFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYT--HAVKRGRALDDCVGNSL 429
            F DM+     P++ ++ +VL  C   G + +  +   + T  H +  G     C    +
Sbjct: 582 TFDDMLSKGAKPDYISYVAVLSGCSHSGLVQEGKLYFDMMTRVHGISPGLEHFSC----M 637

Query: 430 ISMYARSGRMEDARKAFESL 449
           + +  R+G + +A+   + +
Sbjct: 638 VDLLGRAGHLTEAKDLIDKM 657



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 112/486 (23%), Positives = 213/486 (43%), Gaps = 79/486 (16%)

Query: 279 FLPDRFT--LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
            LP   T  L+  + +C         + LH   +  GLA  V +  +L+  Y  C   G+
Sbjct: 14  LLPHAVTQALADALRSCGSRGALAGARALHGRLVTVGLASAVFLQNTLLHAYLSC---GA 70

Query: 337 VDDSRKVFDR-MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
           + D+R++    + + NV++   ++ GY + G    +A +LF  M +  VA  +   +   
Sbjct: 71  LSDARRLLRADIKEPNVITHNIMMNGYAKQGSL-SDAEELFDRMPRRDVASWNTLMSDTS 129

Query: 396 K------ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA---- 445
           +      +CG L    +A Q+     K     D  V  +L+ M+ R G ++ A +     
Sbjct: 130 RPAGSWMSCGALGCRELAPQLLGLFWKFDFWGDPDVETALVDMFVRCGYVDFASRLFSQI 189

Query: 446 ---------------------------FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
                                      FE + E+++VS+N M+ A +++    +A  L+ 
Sbjct: 190 ERPTIFCRNSMLAGYAKLYGIDHAIEYFEDMAERDVVSWNMMIAALSQSGRVREALGLVV 249

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           E+   GV   + T+ S L+  + + ++G G+Q+HA++I+S  + +  + +ALI +Y++C 
Sbjct: 250 EMHRKGVRLDSTTYTSSLTACARLFSLGWGKQLHAKVIRSLPQIDPYVASALIELYAKCG 309

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           + + A +VF  ++DRN +SWT +I G  ++   ++++E+F +M A+ +  +      ++S
Sbjct: 310 SFKEAKRVFNSLQDRNSVSWTVLIGGSLQYECFSKSVELFNQMRAELMAIDQFALATLIS 369

Query: 599 AC-----------SHAGLISEGWKHFR---------SMYDEHGIVQRME----------- 627
            C            H+  +  G  H R         S+Y + G +Q  E           
Sbjct: 370 GCFNRMDLCLGRQLHSLCLKSG--HNRAIVVSNSLISLYAKCGDLQNAEFVFSSMSERDI 427

Query: 628 -HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
             +  M+    + G++ +A EF   M  + + + W   LGA   HG  E G      +L 
Sbjct: 428 VSWTSMITAYSQIGNIIKAREFFDGMA-TRNAITWNAMLGAYIQHGAEEDGLKMYSAMLS 486

Query: 687 QDPQDP 692
           Q    P
Sbjct: 487 QKDVTP 492


>gi|125563252|gb|EAZ08632.1| hypothetical protein OsI_30906 [Oryza sativa Indica Group]
          Length = 755

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/764 (35%), Positives = 432/764 (56%), Gaps = 51/764 (6%)

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
           +LEP  +  N  I+ + + G + +A ++F +M  +R   ++++M++ Y   G+   A  +
Sbjct: 33  RLEPEVIRSNKAITAHMRAGRVADAERLFAAM-PRRSTSTYNAMLAGYSANGRLPLAASL 91

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F  +      P+ Y ++ ++ A + + ++A            G FD          ++ +
Sbjct: 92  FRAIPR----PDNYSYNTLLHALAVSSSLADAR---------GLFDEMPVRDSVTYNVMI 138

Query: 228 K-----GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-----LDMILS 277
                 G V L   Y  FD   EK+ V W  M+    + G   +A  LF      D I  
Sbjct: 139 SSHANHGLVSLARHY--FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDAISW 196

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
             L   +   G +S   EL     G+ + SW I             +V  YA+    G +
Sbjct: 197 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNI-------------MVSGYAR---RGDM 240

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            ++R++FD     +V +WTA+++GY Q+G  + EA ++F  M +      +   A+ ++ 
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE-EARRVFDAMPERNAVSWNAMVAAYIQR 299

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
              ++D   A++++     R  A      N++++ YA++G +E+A+  F+++ +K+ VS+
Sbjct: 300 --RMMDE--AKELFNMMPCRNVA----SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSW 351

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+ AY++   SE+  +L  E+   G   +   FA +LS  + I A+  G Q+H R+I+
Sbjct: 352 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 411

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +G+     + NAL++MY +C N+E A   F+EME+R+V+SW +MI G+A+HGF   ALEI
Sbjct: 412 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 471

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F  M     KP+ IT + VL+ACSH+GL+ +G  +F SM+ + G+  + EHY CM+DLLG
Sbjct: 472 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 531

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L EA + ++ MP   D  +W   LGA R+H + ELG+ AAE I E +P++   ++L
Sbjct: 532 RAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVL 591

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN+YAS+G W     +R  M+ER + K  G SWIE  NKVH F  G+  HP+  +IYA 
Sbjct: 592 LSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAF 651

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           L+ L +++K+ GY+  T+ VLH++EEE+K   L  HSEK+AVA+G+++    +PIRV KN
Sbjct: 652 LEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKN 711

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVCGDCH A KYIS + GR I+LRDSNRFHH + G CSC DYW
Sbjct: 712 LRVCGDCHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 755



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G   +   ++ +L +C        G  +H  L R+       + N+L+++Y KCG+
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 433

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A   F+ M  +RD+VSW++MI+ Y   G   +A+ +F  M      P++     V+ 
Sbjct: 434 MEDARNAFEEM-EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492

Query: 189 ACSNTENVAIG 199
           ACS++  V  G
Sbjct: 493 ACSHSGLVEKG 503


>gi|449435276|ref|XP_004135421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
 gi|449493520|ref|XP_004159329.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 743

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/661 (37%), Positives = 391/661 (59%), Gaps = 36/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVS 291
           L+   +VFD M   + V W  +++     G   +++R++  M+  G +  +R T S ++ 
Sbjct: 87  LQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISESVRVYNMMLKDGSVNLNRITFSTMLI 146

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
             S       G+Q+H    + G    + VG  LVDMYAK    G ++D+ ++F+ + + N
Sbjct: 147 LSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKT---GFINDANRIFEEIPEKN 203

Query: 352 V-------------------------------MSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           +                               +SWT IITG  Q+G   KEAV  F +M 
Sbjct: 204 IVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNG-LFKEAVDKFKEMG 262

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
                 + FTF SVL ACG  L  +  +Q++ + ++     +  VG++L+ MY +   ++
Sbjct: 263 IEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVK 322

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A   F  +  KN++S+  M+  Y +N  SE+A  +  +++   +    +T  S++S  +
Sbjct: 323 YAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCA 382

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++ ++ +G Q H + + SG      + NALI++Y +C ++E A Q+F EM+ R+ +SWT+
Sbjct: 383 NLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFHEMKIRDEVSWTA 442

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +++G+A+ G A   + +F  MLA GI P+G+T++ VLSACS AGL+ +G+ +F  M  EH
Sbjct: 443 LVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEH 502

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I    +HY CM+DLL R+G L EA  FI  MP S D + W T L +CR++G+ E+GK A
Sbjct: 503 RITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSSCRLNGNLEIGKWA 562

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE + + +PQ+PA++ILLS++YA+ G W+ VA +RK M+E  + KE G SWI+  NKVH 
Sbjct: 563 AESLHKLEPQNPASYILLSSIYAAKGKWDDVAKLRKGMREMGVKKEPGHSWIKYKNKVHI 622

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F   + S P + +IYA+L+ L LK+ E GY+PD +FVLH++E+ +K++ L  HSEK+A+A
Sbjct: 623 FSADDRSSPFSDQIYAKLESLYLKMIEEGYVPDMSFVLHDVEKSEKIKMLNHHSEKLAIA 682

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGL+       IRV KNLRVCGDCH A KYIS +T REI++RD+ RFH  KDG CSC D+
Sbjct: 683 FGLLFIPDGLQIRVVKNLRVCGDCHNATKYISRITQREILVRDAVRFHLFKDGVCSCGDF 742

Query: 861 W 861
           W
Sbjct: 743 W 743



 Score =  231 bits (588), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 151/492 (30%), Positives = 246/492 (50%), Gaps = 49/492 (9%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +PN    N+L+S YSK G L +  ++F SM N  D+VSW+S++S Y   G   +++ ++ 
Sbjct: 68  QPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPN-HDVVSWNSLLSGYAGNGLISESVRVYN 126

Query: 170 EMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            ML+ G    N   FS ++   SN   V +G  I+G + K GY  S + VG  L+DM+ K
Sbjct: 127 MMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGY-QSYLFVGSPLVDMYAK 185

Query: 229 -GSVD-----------------------------LESAYKVFDKMTEKNTVGWTLMITRC 258
            G ++                             +  A ++FD M EK+++ WT +IT  
Sbjct: 186 TGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGL 245

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           TQ G  ++A+  F +M + GF  D+FT   V++AC        GKQ+H++ IRT    ++
Sbjct: 246 TQNGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNI 305

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG +L+DMY KC    +V  +  VF +M   NV+SWTA++ GY Q+ G  +EAV++F D
Sbjct: 306 FVGSALLDMYCKCR---NVKYAEAVFRKMRHKNVISWTAMLVGYGQN-GYSEEAVRIFCD 361

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M + ++ P+ FT  SV+ +C NL       Q +  A+  G      V N+LI++Y + G 
Sbjct: 362 MQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKCGS 421

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +E A + F  +  ++ VS+  +V  YA+   + +   L   +   G+     TF  +LS 
Sbjct: 422 LEHAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSA 481

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCI------YNALISMYSRCANVEAAFQVFKEME- 551
            S  G + KG      ++K      H I      Y  +I + SR   +E A     +M  
Sbjct: 482 CSRAGLVEKGYHYFECMVKE-----HRITPIPDHYTCMIDLLSRAGRLEEAKNFINQMPF 536

Query: 552 DRNVISWTSMIT 563
             + I W ++++
Sbjct: 537 SPDAIGWATLLS 548



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/381 (31%), Positives = 205/381 (53%), Gaps = 20/381 (5%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E N V+ N++I+   +C  + EA ++F +M  K D +SW+++I+     G   +A+  F 
Sbjct: 201 EKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEK-DSISWTTIITGLTQNGLFKEAVDKFK 259

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           EM   GFC +++ F +V+ AC     +  G  I+ ++++  Y D ++ VG AL+DM+ K 
Sbjct: 260 EMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQD-NIFVGSALLDMYCKC 318

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             +++ A  VF KM  KN + WT M+    Q G   +A+R+F DM  +   PD FTL  V
Sbjct: 319 R-NVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSV 377

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +S+C+ L     G Q H  A+ +GL   V V  +L+ +Y KC   GS++ + ++F  M  
Sbjct: 378 ISSCANLASLEEGAQFHGQALASGLICFVTVSNALITLYGKC---GSLEHAHQLFHEMKI 434

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            + +SWTA+++GY Q  G+  E + LF  M+   + P+  TF  VL AC     + + E+
Sbjct: 435 RDEVSWTALVSGYAQF-GKANETISLFETMLAHGIVPDGVTFVGVLSACSR---AGLVEK 490

Query: 410 VYTH---AVKRGR--ALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            Y +    VK  R   + D     +I + +R+GR+E+A+     + F  + + + T++ +
Sbjct: 491 GYHYFECMVKEHRITPIPDHY-TCMIDLLSRAGRLEEAKNFINQMPFSPDAIGWATLLSS 549

Query: 464 YAKNLNSE---KAFELLHEIE 481
              N N E    A E LH++E
Sbjct: 550 CRLNGNLEIGKWAAESLHKLE 570



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 197/388 (50%), Gaps = 43/388 (11%)

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ- 381
           +L+  Y+K    G + D ++VFD M +H+V+SW ++++GY    G   E+V++++ M++ 
Sbjct: 76  TLLSAYSKL---GYLQDMQRVFDSMPNHDVVSWNSLLSGYA-GNGLISESVRVYNMMLKD 131

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
           G V  N  TF+++L    N    ++  Q++    K G      VG+ L+ MYA++G + D
Sbjct: 132 GSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVDMYAKTGFIND 191

Query: 442 ARKAFESLFEKNLVSYNTMVDAY-------------------------------AKNLNS 470
           A + FE + EKN+V YNTM+                                   +N   
Sbjct: 192 ANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNMPEKDSISWTTIITGLTQNGLF 251

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           ++A +   E+   G     +TF S+L+      A+ +G+QIHA II++ ++ N  + +AL
Sbjct: 252 KEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSAL 311

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MY +C NV+ A  VF++M  +NVISWT+M+ G+ ++G++  A+ IF  M  + I P+ 
Sbjct: 312 LDMYCKCRNVKYAEAVFRKMRHKNVISWTAMLVGYGQNGYSEEAVRIFCDMQRNEIHPDD 371

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
            T  +V+S+C++   + EG   F       G++  +     ++ L G+ GSL  A +   
Sbjct: 372 FTLGSVISSCANLASLEEG-AQFHGQALASGLICFVTVSNALITLYGKCGSLEHAHQLFH 430

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGK 678
            M +  D + W        V G  + GK
Sbjct: 431 EMKIR-DEVSWTAL-----VSGYAQFGK 452



 Score =  114 bits (285), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 72/248 (29%), Positives = 129/248 (52%), Gaps = 5/248 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+     M  +G   D  T+  +L +C        GK +H+ + R+  + N  +
Sbjct: 248 NGLFKEAVDKFKEMGIEGFCMDQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFV 307

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++L+ +Y KC ++  A  +F+ M +K +++SW++M+  Y   G   +A+ +F +M    
Sbjct: 308 GSALLDMYCKCRNVKYAEAVFRKMRHK-NVISWTAMLVGYGQNGYSEEAVRIFCDMQRNE 366

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P+++   +VI +C+N  ++  G   +G  L  G     V V  ALI ++ K GS  LE
Sbjct: 367 IHPDDFTLGSVISSCANLASLEEGAQFHGQALASGLI-CFVTVSNALITLYGKCGS--LE 423

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A+++F +M  ++ V WT +++   Q G   + I LF  M+  G +PD  T  GV+SACS
Sbjct: 424 HAHQLFHEMKIRDEVSWTALVSGYAQFGKANETISLFETMLAHGIVPDGVTFVGVLSACS 483

Query: 295 ELELFTSG 302
              L   G
Sbjct: 484 RAGLVEKG 491



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/373 (21%), Positives = 159/373 (42%), Gaps = 72/373 (19%)

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
           + N++T A  LK C    +    ++++   ++     +  + N+LI+ Y + G +++AR 
Sbjct: 4   SSNYYTAA--LKFCCEARNRAQVKKLHCRIIRTLTNPETFLYNNLINTYGKLGDLKNARN 61

Query: 445 AFESLFEKNLVSYNTMVDAYAK--------------------------------NLNSEK 472
            F+ + + NL S+NT++ AY+K                                 L SE 
Sbjct: 62  VFDHIPQPNLFSWNTLLSAYSKLGYLQDMQRVFDSMPNHDVVSWNSLLSGYAGNGLISES 121

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
                  ++D  V  +  TF+++L  +S+ G +  G QIH +I K G++S   + + L+ 
Sbjct: 122 VRVYNMMLKDGSVNLNRITFSTMLILSSNRGFVDLGRQIHGQIFKFGYQSYLFVGSPLVD 181

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++   +  A ++F+E+ ++N++ + +MITG  +  F   A ++F  M     + + I+
Sbjct: 182 MYAKTGFINDANRIFEEIPEKNIVVYNTMITGLLRCRFIVEAEQLFDNM----PEKDSIS 237

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +  +++  +  GL  E    F+ M  E           CM                    
Sbjct: 238 WTTIITGLTQNGLFKEAVDKFKEMGIEG---------FCM-------------------- 268

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA-AHILLSNLYASAGHWEYV 711
               D   + + L AC      + GK     I+  D QD       L ++Y    + +Y 
Sbjct: 269 ----DQFTFGSVLTACGGFLALDEGKQIHAYIIRTDYQDNIFVGSALLDMYCKCRNVKYA 324

Query: 712 ANIRKRMKERNLI 724
             + ++M+ +N+I
Sbjct: 325 EAVFRKMRHKNVI 337



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 96/210 (45%), Gaps = 3/210 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ +  +G  ++A+     M +   HPD  T   ++ SC    +   G   H     S L
Sbjct: 343 LVGYGQNGYSEEAVRIFCDMQRNEIHPDDFTLGSVISSCANLASLEEGAQFHGQALASGL 402

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                + N+LI+LY KCG L  A+++F  M   RD VSW++++S Y   GK  + I +F 
Sbjct: 403 ICFVTVSNALITLYGKCGSLEHAHQLFHEM-KIRDEVSWTALVSGYAQFGKANETISLFE 461

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            ML  G  P+   F  V+ ACS    V  G+  +  ++K             +ID+  + 
Sbjct: 462 TMLAHGIVPDGVTFVGVLSACSRAGLVEKGYHYFECMVKEHRITPIPDHYTCMIDLLSRA 521

Query: 230 SVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
              LE A    ++M    + +GW  +++ C
Sbjct: 522 G-RLEEAKNFINQMPFSPDAIGWATLLSSC 550


>gi|413942600|gb|AFW75249.1| hypothetical protein ZEAMMB73_388642 [Zea mays]
          Length = 693

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 260/687 (37%), Positives = 403/687 (58%), Gaps = 10/687 (1%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P    F+A+++ C+   ++A G  ++  L   G   S+     AL +M+ K     + A 
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARG-LASESIASTALANMYFKCRRPAD-AR 71

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI--LSGFLPDRFTLSGVVSACSE 295
           +VFD+M  ++ V W  ++    + G P  A+   + M     G  PD  TL  V+ AC++
Sbjct: 72  RVFDRMPSRDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACAD 131

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                + +++H++A+R GL   V V  +++D Y KC   G+V+ +R VFD M   N +SW
Sbjct: 132 ARALHACREVHAFALRAGLDELVNVSTAVLDAYCKC---GAVEAARAVFDCMPVRNSVSW 188

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I GY  +G    EA+ LF  M+Q  V     +  + L+ACG L   +   +V+   V
Sbjct: 189 NAMIDGYADNGNA-TEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLV 247

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKNLNSEKAF 474
           + G + +  V N+LI+ YA+  R + A + F  L  +K  +S+N M+  + +N   E A 
Sbjct: 248 RVGLSSNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAE 307

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L   ++   V   ++T  S++   + I    +   IH   I+   + +  +  ALI MY
Sbjct: 308 RLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALIDMY 367

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S+C  V  A ++F    DR+VI+W +MI G+  HGF   A+E+F +M   G  PN  T++
Sbjct: 368 SKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFL 427

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           +VL+ACSHAGL+ EG K+F SM  ++G+   MEHY  MVDLLGR+G L EA  FI++MP+
Sbjct: 428 SVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNMPI 487

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
              + V+   LGAC++H + EL + +A++I E  P++   H+LL+N+YA+A  W+ VA +
Sbjct: 488 EPGISVYGAMLGACKLHKNVELAEESAQIIFELGPEEGVYHVLLANIYANASMWKDVARV 547

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R  M+++ L K  G S I+  N+VH F+ G T+H    +IYA L +L  +IK+ GY+PDT
Sbjct: 548 RTAMEKKGLQKTPGWSIIQLKNEVHTFYSGSTNHQHAKDIYARLAKLIEEIKDMGYVPDT 607

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           + + H++E++ K Q L  HSEK+A+A+GLI T+    I++ KNLRVC DCH A K IS++
Sbjct: 608 DSI-HDVEDDVKAQLLNTHSEKLAIAYGLIRTAPGTTIQIKKNLRVCNDCHNATKLISLL 666

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
           TGREI++RD  RFHH KDGKCSC DYW
Sbjct: 667 TGREIIMRDIQRFHHFKDGKCSCGDYW 693



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 247/497 (49%), Gaps = 13/497 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P L T++ LLK C    +   G+ VH+ L    L   S+   +L ++Y KC    +A ++
Sbjct: 14  PVLRTFTALLKLCAARADLATGRAVHAQLEARGLASESIASTALANMYFKCRRPADARRV 73

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCFSAVIRACSNT 193
           F  M + RD V+W+++++ Y   G    A+   V M   E G  P+     +V+ AC++ 
Sbjct: 74  FDRMPS-RDRVAWNAVVAGYARNGLPSSAMEAVVRMQGEEGGERPDSVTLVSVLPACADA 132

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWT 252
             +     ++ F L+ G  D  V V  A++D + K G+V  E+A  VFD M  +N+V W 
Sbjct: 133 RALHACREVHAFALRAG-LDELVNVSTAVLDAYCKCGAV--EAARAVFDCMPVRNSVSWN 189

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            MI      G   +A+ LF  M+  G      ++   + AC EL      +++H   +R 
Sbjct: 190 AMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQACGELGYLDEVRRVHELLVRV 249

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV-MSWTAIITGYVQSGGRDKE 371
           GL+ +V V  +L+  YAKC      D + +VF+ + +    +SW A+I G+ Q+    ++
Sbjct: 250 GLSSNVSVTNALITTYAKCK---RADLAAQVFNELGNKKTRISWNAMILGFTQNEC-PED 305

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A +LF+ M    V P+ FT  SV+ A  ++ D   A  ++ ++++     D  V  +LI 
Sbjct: 306 AERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIRHQLDQDVYVLTALID 365

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY++ GR+  AR+ F+S  +++++++N M+  Y  +   + A EL  E++ TG   +  T
Sbjct: 366 MYSKCGRVSIARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETT 425

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           F S+L+  S  G + +G++  A + K  G E     Y  ++ +  R   ++ A+   K M
Sbjct: 426 FLSVLAACSHAGLVDEGQKYFASMKKDYGLEPGMEHYGTMVDLLGRAGKLDEAWSFIKNM 485

Query: 551 EDRNVISWTSMITGFAK 567
                IS    + G  K
Sbjct: 486 PIEPGISVYGAMLGACK 502



 Score =  182 bits (462), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 214/427 (50%), Gaps = 18/427 (4%)

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN 130
           + G  PD  T   +L +C  +R  H  + VH+   R+ L+    +  +++  Y KCG + 
Sbjct: 112 EGGERPDSVTLVSVLPACADARALHACREVHAFALRAGLDELVNVSTAVLDAYCKCGAVE 171

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
            A  +F  M   R+ VSW++MI  Y + G   +A+ +F  M++ G    +    A ++AC
Sbjct: 172 AARAVFDCM-PVRNSVSWNAMIDGYADNGNATEAMALFWRMVQEGVDVTDASVLAALQAC 230

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNT- 248
                +     ++  L++ G   S+V V  ALI  + K    DL  A +VF+++  K T 
Sbjct: 231 GELGYLDEVRRVHELLVRVG-LSSNVSVTNALITTYAKCKRADL--AAQVFNELGNKKTR 287

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           + W  MI   TQ  CP DA RLF  M L    PD FTL  V+ A +++      + +H +
Sbjct: 288 ISWNAMILGFTQNECPEDAERLFARMQLENVRPDSFTLVSVIPAVADISDPLQARWIHGY 347

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           +IR  L  DV V  +L+DMY+KC   G V  +R++FD   D +V++W A+I GY  S G 
Sbjct: 348 SIRHQLDQDVYVLTALIDMYSKC---GRVSIARRLFDSARDRHVITWNAMIHGY-GSHGF 403

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVG 426
            + AV+LF +M      PN  TF SVL AC    L+D     Q Y  ++K+   L+  + 
Sbjct: 404 GQAAVELFEEMKGTGSLPNETTFLSVLAACSHAGLVDEG---QKYFASMKKDYGLEPGME 460

Query: 427 N--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
           +  +++ +  R+G++++A    +++  E  +  Y  M+ A   + N E A E    I + 
Sbjct: 461 HYGTMVDLLGRAGKLDEAWSFIKNMPIEPGISVYGAMLGACKLHKNVELAEESAQIIFEL 520

Query: 484 GVGTSAY 490
           G     Y
Sbjct: 521 GPEEGVY 527



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 75/255 (29%), Positives = 127/255 (49%), Gaps = 8/255 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLE 110
           + ++G   +A+     M Q+G   D+   S+L  L++C         + VH LL R  L 
Sbjct: 195 YADNGNATEAMALFWRMVQEG--VDVTDASVLAALQACGELGYLDEVRRVHELLVRVGLS 252

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            N  + N+LI+ Y+KC   + A ++F  +GNK+  +SW++MI  +       DA  +F  
Sbjct: 253 SNVSVTNALITTYAKCKRADLAAQVFNELGNKKTRISWNAMILGFTQNECPEDAERLFAR 312

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M      P+ +   +VI A ++  +      I+G+ ++    D DV V  ALIDM+ K G
Sbjct: 313 MQLENVRPDSFTLVSVIPAVADISDPLQARWIHGYSIR-HQLDQDVYVLTALIDMYSKCG 371

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            V +  A ++FD   +++ + W  MI      G  + A+ LF +M  +G LP+  T   V
Sbjct: 372 RVSI--ARRLFDSARDRHVITWNAMIHGYGSHGFGQAAVELFEEMKGTGSLPNETTFLSV 429

Query: 290 VSACSELELFTSGKQ 304
           ++ACS   L   G++
Sbjct: 430 LAACSHAGLVDEGQK 444


>gi|302798306|ref|XP_002980913.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
 gi|300151452|gb|EFJ18098.1| hypothetical protein SELMODRAFT_113567 [Selaginella moellendorffii]
          Length = 809

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 279/805 (34%), Positives = 444/805 (55%), Gaps = 34/805 (4%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKL------EPNSVIL-NSLISLYSKCGDLNEA 132
           +Y+ LLK C R  +   GK +H+ +  S L      E  +  L N L+ +Y KCG  +EA
Sbjct: 16  SYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            + F S+ +K +I SW+S++ +Y + G    A+  F +M++ G  P+   F A +  C  
Sbjct: 76  QRAFDSIAHK-NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGI 134

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGW 251
            + +  G  I+   ++    DSD+ +G AL+ M+ K G +DL  A ++FD +  KN + W
Sbjct: 135 LKRLEDGAGIH-RQIQDKLLDSDLEIGNALVSMYGKCGRLDL--AKQLFDCLEMKNVISW 191

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL-HSWAI 310
           T++++   + G  R+   L   M + G  PD+  L  +++ CS   +      + H + +
Sbjct: 192 TILVSVFAENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIV 251

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN---VMSWTAIITGYVQSGG 367
            +GL  +  V  +L+ M+A+C   G VD +R++F+++ DH+   +  W A+IT Y   G 
Sbjct: 252 GSGLDREAVVATALLSMFARC---GRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGC 308

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             KEA+ L   +    V PN  TF S L AC +L D      +   +   G   +  V N
Sbjct: 309 -SKEALFLLDSLQLQGVKPNCITFISSLGACSSLQDGRALHLLIDES---GFDREVSVAN 364

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE-DTGVG 486
           +L++MY R G + D+ K F  + EK+L S+N+ + A+A +  S++  +LL ++  + G+ 
Sbjct: 365 ALVTMYGRCGSLLDSAKLFSEMAEKDLASWNSAIAAHAYHGRSDECIKLLDQMRGEGGLE 424

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            S+ T  + +S    +      +++H R  + G ES  C+ N L+ MY +  +V+ A  +
Sbjct: 425 PSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYI 484

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F     RNV +W +M   + + G     L +   M  DG +P+ +T++++LS C H+GL+
Sbjct: 485 FDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGHSGLL 544

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS--ADVLVWRTF 664
            E   +F +M  E GI    +HY+C++DLL R+G L +A +FI  + +S  A   +W   
Sbjct: 545 EEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAEDFIARISVSSPASSPMWMAL 604

Query: 665 LGACRVHGDTELGKHA-------AEMILEQDPQDP-AAHILLSNLYASAGHWEYVANIRK 716
           LGACR  GD+              E +  +   DP AAH+ L+N+ A++G+W+   +IRK
Sbjct: 605 LGACRSLGDSSSRARRAARNAMDVEKMEPRSQHDPSAAHVALANICAASGNWDEALSIRK 664

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M E+ L KE G S I   N++H+F  G+  HP+  EIYAEL +L   + + GY+ DT  
Sbjct: 665 AMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAELRRLERAMVDRGYVVDTGM 724

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           V H + E  K   L  HSEK+AVAFG++ST     +R+ KNLR CGDCHTAIK IS + G
Sbjct: 725 VTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKNLRACGDCHTAIKLISAIEG 784

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REIV+RDSNRFHH ++G CSC DYW
Sbjct: 785 REIVVRDSNRFHHFRNGSCSCGDYW 809



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/457 (27%), Positives = 222/457 (48%), Gaps = 23/457 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ + + G   +A+     M + G  PD   +   L  C   +    G  +H  +    L
Sbjct: 94  LVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKLL 153

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + +  I N+L+S+Y KCG L+ A ++F  +   ++++SW+ ++S +   G++ +   +  
Sbjct: 154 DSDLEIGNALVSMYGKCGRLDLAKQLFDCL-EMKNVISWTILVSVFAENGRRRETWGLLR 212

Query: 170 EMLELGFCPNEYCFSAVIRACSNT----ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            M   G  P++     ++  CS+     E+  + H    +++  G  D +  V  AL+ M
Sbjct: 213 SMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAH---DYIVGSG-LDREAVVATALLSM 268

Query: 226 FVK-GSVDLESAYKVFDKMTEKNTV---GWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           F + G VD   A ++F+K+ + +      W  MIT     GC ++A+ L   + L G  P
Sbjct: 269 FARCGRVD--KAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVKP 326

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           +  T    + ACS L+    G+ LH     +G   +V V  +LV MY +C   GS+ DS 
Sbjct: 327 NCITFISSLGACSSLQ---DGRALHLLIDESGFDREVSVANALVTMYGRC---GSLLDSA 380

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGN 400
           K+F  M + ++ SW + I  +    GR  E +KL   M  +G + P+  T  + + ACG 
Sbjct: 381 KLFSEMAEKDLASWNSAIAAHAYH-GRSDECIKLLDQMRGEGGLEPSSVTLVTAMSACGG 439

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L D + +++V+  A + G   + CV N L+ MY ++G ++ AR  F+    +N+ ++N M
Sbjct: 440 LADPSSSKRVHERARELGLESETCVANGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAM 499

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
             AY +   +     L+  ++  G    + TF SLLS
Sbjct: 500 AGAYRQCGVTRGVLWLVRTMQRDGYRPDSVTFVSLLS 536



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/189 (26%), Positives = 97/189 (51%), Gaps = 9/189 (4%)

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF------ESN-HCIYNALIS 532
           I  +GV  +  ++A LL     +G +  G+++HA+I +SG       ES    + N L+ 
Sbjct: 5   ISRSGVDDACRSYARLLKECGRLGDLAHGKRLHAQIRESGLLLDDREESGARFLGNCLVQ 64

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY +C   + A + F  +  +N+ SWTS++  +   G  A+ALE F++M+  G++P+ + 
Sbjct: 65  MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 124

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++A L+ C     + +G    R + D+  +   +E    +V + G+ G L  A +    +
Sbjct: 125 FLAALNVCGILKRLEDGAGIHRQIQDKL-LDSDLEIGNALVSMYGKCGRLDLAKQLFDCL 183

Query: 653 PLSADVLVW 661
            +  +V+ W
Sbjct: 184 EMK-NVISW 191


>gi|414867142|tpg|DAA45699.1| TPA: hypothetical protein ZEAMMB73_401104 [Zea mays]
          Length = 746

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 250/689 (36%), Positives = 410/689 (59%), Gaps = 14/689 (2%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
           P+ + F  ++RA     + A    ++   L+ G    +V    +L+  +++ G V    A
Sbjct: 67  PDSFTFPPLVRAAPGPASAAQ---LHACALRLGLLHPNVFASGSLVHAYLRFGRV--AEA 121

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           Y+VFD+M E++   W  M++   +     DA+ L   M+  G   D  TLS V+  C  L
Sbjct: 122 YRVFDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVL 181

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                   +H +A++ GL+ ++ V  +L+D+Y K    G + ++  VF  M   ++++W 
Sbjct: 182 GDRALALVMHVYAVKHGLSGELFVCNALIDVYGKL---GMLTEAHWVFGGMALRDLVTWN 238

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           +II+   Q GG+   AV+LF  M++  V P+  T  S+  A     D   A+ V+ +  +
Sbjct: 239 SIISANEQ-GGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRR 297

Query: 417 RGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           RG  + D + GN+++ MYA+  +++ A+K F++L ++++VS+NT++  Y +N  + +A  
Sbjct: 298 RGWDVGDIIAGNAMVDMYAKMSKIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIR 357

Query: 476 LLHEIED-TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           + +++ +  G+     TF S+L   S +G + +G ++HA  IK+G   +  +   LI +Y
Sbjct: 358 IYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLY 417

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C  +  A  +F+ M  R+   W ++I G   HG  A+AL +F +M  + IKP+ +T++
Sbjct: 418 AKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGVHGHGAKALSLFSQMQQEEIKPDHVTFV 477

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L+ACSHAGL+ +G   F  M   +GIV   +HY CMVD+LGR+G L EA EFI+SMP+
Sbjct: 478 SLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAKHYTCMVDMLGRAGQLDEAFEFIQSMPI 537

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D  VW   LGACR+HG+ E+GK A++ + E DP++   ++L+SN+YA  G W+ V  +
Sbjct: 538 KPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKIGKWDGVDAV 597

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETS--HPKTLEIYAELDQLALKIKEFGYLP 772
           R  ++ +NL K  G S +E    V  F+ G  +  HP+  EI   L  L  K+K  GY+P
Sbjct: 598 RSLVRRQNLQKTPGWSSMEVKGSVSVFYSGTQTEPHPQHEEIQRGLHDLLAKMKSAGYVP 657

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D +FVL ++EE++K Q L  HSE++A+AFG+I+T    P+ ++KNLRVCGDCH+A KYIS
Sbjct: 658 DYSFVLQDVEEDEKEQILNNHSERLAIAFGIINTPPGTPLHIYKNLRVCGDCHSATKYIS 717

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +T REI++RD+NRFHH KDG CSC D+W
Sbjct: 718 KITEREIIVRDANRFHHFKDGHCSCGDFW 746



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/533 (27%), Positives = 245/533 (45%), Gaps = 49/533 (9%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P    P  N ++  L  + R   A+  L  M  +G   D  T S +L  C+   + 
Sbjct: 125 FDEMPERDVPAWNAMLSGLCRNTRAADAVTLLGRMVGEGVAGDAVTLSSVLPMCVVLGDR 184

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            L  ++H    +  L     + N+LI +Y K G L EA+ +F  M   RD+V+W+S+IS+
Sbjct: 185 ALALVMHVYAVKHGLSGELFVCNALIDVYGKLGMLTEAHWVFGGMA-LRDLVTWNSIISA 243

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
               GK   A+ +F  M+E G CP+     ++  A +   +      ++ ++ + G+   
Sbjct: 244 NEQGGKVAAAVELFHGMMESGVCPDVLTLVSLASAVAQCGDELGAKSVHCYVRRRGWDVG 303

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+  G A++DM+ K S  +++A KVFD + +++ V W  +IT   Q G   +AIR++ DM
Sbjct: 304 DIIAGNAMVDMYAKMS-KIDAAQKVFDNLPDRDVVSWNTLITGYMQNGLANEAIRIYNDM 362

Query: 275 -ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
               G  P + T   V+ A S L     G ++H+ +I+TGL LDV V   L+D+YAKC  
Sbjct: 363 HNHEGLKPIQGTFVSVLPAYSYLGGLQQGMRMHALSIKTGLNLDVYVTTCLIDLYAKC-- 420

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G + ++  +F+ M   +   W AII G +   G   +A+ LFS M Q ++ P+H TF S
Sbjct: 421 -GKLVEAMFLFEHMPRRSTGPWNAIIAG-LGVHGHGAKALSLFSQMQQEEIKPDHVTFVS 478

Query: 394 VLKACGNLLDSNVAEQVYTHA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           +L AC             +HA  V +GR+  D        M    G +  A+        
Sbjct: 479 LLAAC-------------SHAGLVDQGRSFFDL-------MQTVYGIVPIAKH------- 511

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
                Y  MVD   +    ++AFE    I+   +   +  + +LL      G +  G+  
Sbjct: 512 -----YTCMVDMLGRAGQLDEAFEF---IQSMPIKPDSAVWGALLGACRIHGNVEMGKVA 563

Query: 512 HARIIKSGFESNHCIYNALISMYSRCA---NVEAAFQVFKEMEDRNVISWTSM 561
              + +   E N   Y  + +MY++      V+A   + +    +    W+SM
Sbjct: 564 SQNLFELDPE-NVGYYVLMSNMYAKIGKWDGVDAVRSLVRRQNLQKTPGWSSM 615



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 128/465 (27%), Positives = 228/465 (49%), Gaps = 11/465 (2%)

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           L PN     SL+  Y + G + EA ++F  M  +RD+ +W++M+S      +  DA+ + 
Sbjct: 98  LHPNVFASGSLVHAYLRFGRVAEAYRVFDEM-PERDVPAWNAMLSGLCRNTRAADAVTLL 156

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
             M+  G   +    S+V+  C    + A+  +++ + +K G    ++ V  ALID++ K
Sbjct: 157 GRMVGEGVAGDAVTLSSVLPMCVVLGDRALALVMHVYAVKHG-LSGELFVCNALIDVYGK 215

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
             + L  A+ VF  M  ++ V W  +I+   Q G    A+ LF  M+ SG  PD  TL  
Sbjct: 216 LGM-LTEAHWVFGGMALRDLVTWNSIISANEQGGKVAAAVELFHGMMESGVCPDVLTLVS 274

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           + SA ++       K +H +  R G  + D+  G ++VDMYAK +    +D ++KVFD +
Sbjct: 275 LASAVAQCGDELGAKSVHCYVRRRGWDVGDIIAGNAMVDMYAKMS---KIDAAQKVFDNL 331

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNV 406
            D +V+SW  +ITGY+Q+ G   EA+++++DM   + + P   TF SVL A   L     
Sbjct: 332 PDRDVVSWNTLITGYMQN-GLANEAIRIYNDMHNHEGLKPIQGTFVSVLPAYSYLGGLQQ 390

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             +++  ++K G  LD  V   LI +YA+ G++ +A   FE +  ++   +N ++     
Sbjct: 391 GMRMHALSIKTGLNLDVYVTTCLIDLYAKCGKLVEAMFLFEHMPRRSTGPWNAIIAGLGV 450

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHC 525
           + +  KA  L  +++   +     TF SLL+  S  G + +G      +    G      
Sbjct: 451 HGHGAKALSLFSQMQQEEIKPDHVTFVSLLAACSHAGLVDQGRSFFDLMQTVYGIVPIAK 510

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG 569
            Y  ++ M  R   ++ AF+  + M  + +   W +++     HG
Sbjct: 511 HYTCMVDMLGRAGQLDEAFEFIQSMPIKPDSAVWGALLGACRIHG 555


>gi|58743498|gb|AAW81739.1| Putative Putative Pentatricopeptide (PPR) repeat-containing protein
           [Brassica oleracea]
          Length = 968

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 271/804 (33%), Positives = 441/804 (54%), Gaps = 15/804 (1%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           + ++T+ G  PD  T+  ++K+C       +G  VH L+ +++L  +  + N+L+S Y  
Sbjct: 172 VKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVVKTRLVEDVFVSNALVSFYGT 231

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE----LGFCPNEY 181
            G +++A ++FK M  +R++VSW+SMI  + + G   +   +  +M+E    + F P+  
Sbjct: 232 NGSVSDALRVFKIMP-ERNLVSWNSMIRVFSDNGLSEECFLLLGQMMEKDDEIAFTPDVA 290

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
             + V+  C+    + +G  ++G  +K    D +V V  AL+DM+ K    +  A  +F 
Sbjct: 291 TLATVLPVCARDREIGVGKGVHGLAMKLS-LDKEVVVNNALMDMYSKCGC-INDAQVIFK 348

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELF 299
               KN V W  M+   +  G       L   M+  G     D  T+   V  C E  + 
Sbjct: 349 LNNNKNVVSWNTMVGGFSAAGDIHKTFDLLRQMLAGGGDLRADEVTILNAVPVCFEESVL 408

Query: 300 TSGKQLHSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
            + K+LH ++++     +   V  + V  YAKC   GS+  + +VF  +    V SW A+
Sbjct: 409 PNLKELHCYSLKQEFVHNNELVANAFVASYAKC---GSLSYAHRVFCSIRSKTVNSWNAL 465

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I GY QS    + ++  +  M    + P+ FT  S+L AC  +    + ++V+   ++  
Sbjct: 466 IGGYSQSSD-PRLSLDAYFQMKSSGLLPDLFTVCSLLSACSQIKSLKLGKEVHGLIIRNR 524

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  V  SL+S+Y   G +  A   F+++ +K LVS+NTMV+ Y +N   E+A  L  
Sbjct: 525 LERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWNTMVNGYLQNGFPERALSLFR 584

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++   GV     +  S+    S + ++  G + H   +K   E N  I  ++I MY++  
Sbjct: 585 QMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDNAFIACSVIDMYAKNG 644

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +V  +F+VF  +++R+V SW +M+ G+  HG A  A+++F +M   G  P+ +T++ VL+
Sbjct: 645 SVMESFKVFNGLKERSVASWNAMVMGYGIHGRAKEAIKLFEEMQRTGHCPDELTFLGVLT 704

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF-IRSMPLSAD 657
           AC+H+GL+ EG  +   M    G+   ++HYAC++D+L R+G L EAL+     M     
Sbjct: 705 ACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAGKLDEALKIATEEMSEEPG 764

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
           V +W   L +CR+H + E+G+  A  +   +P+ P  ++LLSNLYA +G W+ V  +R+R
Sbjct: 765 VGIWNFLLSSCRIHKNLEMGEKIAAKLFVSEPEKPENYVLLSNLYAGSGKWDEVRKVRQR 824

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
           MKE +L K+AGCSWIE + KV  F  GE+S     EI +    L  +I + GY PDT+ V
Sbjct: 825 MKEMSLRKDAGCSWIELNGKVFSFVAGESSLDGFEEIKSLWSVLEREIGKMGYRPDTSSV 884

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
            H+L EE+K + L  HSEK+A+ +GLI TS+   +RV+KNLR+C DCH A K IS V  R
Sbjct: 885 QHDLSEEEKTEQLRGHSEKLAITYGLIRTSEGTTLRVYKNLRICVDCHNAAKLISKVMER 944

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           EIV+RD+ RFHH K+G CSC DYW
Sbjct: 945 EIVVRDNKRFHHFKNGFCSCGDYW 968



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 311/599 (51%), Gaps = 32/599 (5%)

Query: 90  RSRNFHLGKLVHSLLTRS-KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSW 148
           R ++  LG+ +H L++ S +L  + V+   +I++YS CG  +++  +F ++  K+++  W
Sbjct: 93  RRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDAL-RKKNLFQW 151

Query: 149 SSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           +++ISSY       + + MFV+M+ E G  P+ + F  V++AC+    V +G  ++G ++
Sbjct: 152 NAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHGLVV 211

Query: 208 KCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           K    + DV V  AL+  +   GSV    A +VF  M E+N V W  MI   +  G   +
Sbjct: 212 KTRLVE-DVFVSNALVSFYGTNGSVS--DALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268

Query: 267 AIRLFLDMILS----GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              L   M+       F PD  TL+ V+  C+       GK +H  A++  L  +V V  
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVGKGVHGLAMKLSLDKEVVVNN 328

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ- 381
           +L+DMY+KC   G ++D++ +F    + NV+SW  ++ G+  +G   K    L   M+  
Sbjct: 329 ALMDMYSKC---GCINDAQVIFKLNNNKNVVSWNTMVGGFSAAGDIHK-TFDLLRQMLAG 384

Query: 382 -GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL-DDCVGNSLISMYARSGRM 439
            G +  +  T  + +  C         ++++ +++K+     ++ V N+ ++ YA+ G +
Sbjct: 385 GGDLRADEVTILNAVPVCFEESVLPNLKELHCYSLKQEFVHNNELVANAFVASYAKCGSL 444

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             A + F S+  K + S+N ++  Y+++ +   + +   +++ +G+    +T  SLLS  
Sbjct: 445 SYAHRVFCSIRSKTVNSWNALIGGYSQSSDPRLSLDAYFQMKSSGLLPDLFTVCSLLSAC 504

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           S I ++  G+++H  II++  E +  +Y +L+S+Y  C  +  A  +F  MED+ ++SW 
Sbjct: 505 SQIKSLKLGKEVHGLIIRNRLERDSFVYISLLSLYIHCGELSTAHVLFDAMEDKTLVSWN 564

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS-----HAGLISEGWKHFR 614
           +M+ G+ ++GF  RAL +F +M+  G++P  I+ ++V  ACS       G  + G+   +
Sbjct: 565 TMVNGYLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYA-LK 623

Query: 615 SMYDEHGIVQRMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            + +++  +      AC ++D+  ++GS+ E+ +    +     V  W   +    +HG
Sbjct: 624 CLLEDNAFI------ACSVIDMYAKNGSVMESFKVFNGLK-ERSVASWNAMVMGYGIHG 675



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 67/284 (23%), Positives = 137/284 (48%), Gaps = 8/284 (2%)

Query: 396 KACGNLLDSNVAEQVYTHAVKRGR-ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           +A G   D  +  +++    +  R + DD +   +I+MY+  G  +D+R  F++L +KNL
Sbjct: 89  QASGRRKDIQLGRKIHQLVSESARLSNDDVLCTRVITMYSMCGSPDDSRSVFDALRKKNL 148

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
             +N ++ +Y++N       E+  + I ++G+    +TF  ++   + +  +  G  +H 
Sbjct: 149 FQWNAVISSYSRNELYHNVLEMFVKMITESGLLPDNFTFPCVVKACAGVSEVQVGLAVHG 208

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
            ++K+    +  + NAL+S Y    +V  A +VFK M +RN++SW SMI  F+ +G +  
Sbjct: 209 LVVKTRLVEDVFVSNALVSFYGTNGSVSDALRVFKIMPERNLVSWNSMIRVFSDNGLSEE 268

Query: 574 ALEIFYKMLAD----GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
              +  +M+         P+  T   VL  C+    I  G K    +  +  + + +   
Sbjct: 269 CFLLLGQMMEKDDEIAFTPDVATLATVLPVCARDREIGVG-KGVHGLAMKLSLDKEVVVN 327

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             ++D+  + G + +A + I  +  + +V+ W T +G     GD
Sbjct: 328 NALMDMYSKCGCINDA-QVIFKLNNNKNVVSWNTMVGGFSAAGD 370



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 102/208 (49%), Gaps = 4/208 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +G  ++A+     M   G  P   +   +  +C    +  LG+  H    +  LE N
Sbjct: 570 YLQNGFPERALSLFRQMVLYGVQPCEISMMSVFGACSLLPSLRLGREAHGYALKCLLEDN 629

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I  S+I +Y+K G + E+ K+F  +  +R + SW++M+  Y   G+  +AI +F EM 
Sbjct: 630 AFIACSVIDMYAKNGSVMESFKVFNGL-KERSVASWNAMVMGYGIHGRAKEAIKLFEEMQ 688

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G CP+E  F  V+ AC+++  V  G      +      +  +     +IDM V+    
Sbjct: 689 RTGHCPDELTFLGVLTACNHSGLVHEGLTYLDQMKTLFGMNPTLKHYACVIDMLVRAG-K 747

Query: 233 LESAYKV-FDKMTEKNTVG-WTLMITRC 258
           L+ A K+  ++M+E+  VG W  +++ C
Sbjct: 748 LDEALKIATEEMSEEPGVGIWNFLLSSC 775


>gi|222617563|gb|EEE53695.1| hypothetical protein OsJ_00010 [Oryza sativa Japonica Group]
          Length = 1008

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 276/855 (32%), Positives = 464/855 (54%), Gaps = 48/855 (5%)

Query: 15   PSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRL-----IYHLNDGRVQKA---IFTL 66
            P   +P+  ++      ++ P  A P+TS P          +  L     Q A   +   
Sbjct: 194  PKGLRPTGGAQAGGRYGTTMPVPATPSTSPPWKEYAPAAPGVVPLKQPSSQAAPAGVTGF 253

Query: 67   DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
            D++T + N        L L+S + S + H  + +   +       N   LN ++S YS  
Sbjct: 254  DVLTYRLN--------LGLRSLLSSGHLHRARAMFDQMPHK----NIFSLNLILSAYSSS 301

Query: 127  GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
            GDL  A  +F S    R+  +W+ M+ ++   G+  DA+ +F  ML  G  P+    + V
Sbjct: 302  GDLPAAQHLFLS-SPHRNATTWTIMMRAHAAAGRTSDALSLFRAMLGEGVIPDRVTVTTV 360

Query: 187  IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
            +    N     +   ++ F +K G  D+ V V   L+D + K  + L +A +VF +M +K
Sbjct: 361  L----NLPGCTVPS-LHPFAIKFG-LDTHVFVCNTLLDAYCKHGL-LAAARRVFLEMHDK 413

Query: 247  NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
            + V +  M+  C++ G    A++LF  M  +G+   R  L         L  ++  +   
Sbjct: 414  DAVTYNAMMMGCSKEGLHTQALQLFAAMRRAGY--SRHPL--------HLLQYSHSRS-- 461

Query: 307  SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
                R+   L+V V  SL+D Y+KC     +DD R++FD M + + +S+  II  Y  + 
Sbjct: 462  ----RSTSVLNVFVNNSLLDFYSKCDC---LDDMRRLFDEMPERDNVSYNVIIAAYAWNQ 514

Query: 367  GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
                  ++LF +M +         +A++L   G+L D ++ +Q++   V  G A +D +G
Sbjct: 515  CA-ATVLRLFREMQKLGFDRQVLPYATMLSVAGSLPDVHIGKQIHAQLVLLGLASEDLLG 573

Query: 427  NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
            N+LI MY++ G ++ A+  F +  EK+ +S+  ++  Y +N   E+A +L  ++   G+ 
Sbjct: 574  NALIDMYSKCGMLDAAKSNFSNRSEKSAISWTALITGYVQNGQHEEALQLFSDMRRAGLR 633

Query: 487  TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
                TF+S++  +SS+  IG G Q+H+ +I+SG++S+    + L+ MY++C  ++ A + 
Sbjct: 634  PDRATFSSIIKASSSLAMIGLGRQLHSYLIRSGYKSSVFSGSVLVDMYAKCGCLDEALRT 693

Query: 547  FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            F EM +RN ISW ++I+ +A +G A  A+++F  ML  G  P+ +T+++VL+ACSH GL 
Sbjct: 694  FDEMPERNSISWNAVISAYAHYGEAKNAIKMFEGMLHCGFNPDSVTFLSVLAACSHNGLA 753

Query: 607  SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             E  K+F  M  ++ I    EHYAC++D LGR G  ++  + +  MP  AD ++W + L 
Sbjct: 754  DECMKYFHLMKHQYSISPWKEHYACVIDTLGRVGCFSQVQKMLVEMPFKADPIIWTSILH 813

Query: 667  ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
            +CR+HG+ EL + AA+ +   +P D   +++LSN+YA AG WE  A ++K M++R + KE
Sbjct: 814  SCRIHGNQELARVAADKLFGMEPTDATPYVILSNIYARAGQWEDAACVKKIMRDRGVRKE 873

Query: 727  AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
            +G SW+E   K++ F   + + P   EI  ELD+L  ++ + GY PD    LH ++ E K
Sbjct: 874  SGYSWVEIKQKIYSFASNDLTSPMIDEIKDELDRLYKEMDKQGYKPDITCALHMVDHELK 933

Query: 787  VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
            ++ L  HSE++A+AF L++T    PIR+ KNL  C DCH  IK IS +  R+I++RDS R
Sbjct: 934  LESLKYHSERLAIAFALMNTPAGTPIRIMKNLTACLDCHAVIKMISKIVNRDIIVRDSRR 993

Query: 847  FHHIKDGKCSCNDYW 861
            FHH KDG CSC DYW
Sbjct: 994  FHHFKDGVCSCGDYW 1008


>gi|449437930|ref|XP_004136743.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 666

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 237/575 (41%), Positives = 366/575 (63%), Gaps = 6/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           +++ C        G+++H+  I+T     V +   L+ +Y KC   G   D+R++FD M 
Sbjct: 96  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLG---DAREMFDEMP 152

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             NV+SWTA+I+ Y Q G    EA+ LF +M++    PNHFTFA++L +C   L      
Sbjct: 153 QKNVVSWTAMISAYSQRG-FAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 211

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q+++ A+KR       VG+SL+ MYA+SGR+ DA   F  L E+++V+   ++  YA+  
Sbjct: 212 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 271

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A +L  +++  G+ +++ T+AS+L+  S + A+  G+Q+H+ +++SG  S   + N
Sbjct: 272 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 331

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IK 587
           +LI MYS+C NV  A ++F  M +R  ISW +M+ G++KHG A   LE+F  M  +  +K
Sbjct: 332 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 391

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYD-EHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           P+ ITY+AVLS CSH  L   G + F +M + + GI   + HY C+VDLLGR+G + EA 
Sbjct: 392 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 451

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           +FI+ MP      +W + LG+CRVH D E+G    + +LE +P++   +++LSNLYASAG
Sbjct: 452 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 511

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE + NIR  M+E+ + KE G SW+E D  VH FH  + +HP+  E+  ++ +L++K K
Sbjct: 512 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVAKKVKELSIKFK 571

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+PD + VL++++EEQK + L  HSEK+A+AFGLI+T +   IRV KNLR+C DCH+
Sbjct: 572 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 631

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K++S +  R ++LRD NRFH+I  G CSC DYW
Sbjct: 632 FAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 666



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 226/418 (54%), Gaps = 15/418 (3%)

Query: 28  LPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           L P S   F  Q + S   S  L    + G++++A+  + ++   G     + Y  +L  
Sbjct: 45  LSPVSRYTFSRQISFSP--SPNLKTLCSSGQLKEALLQMAIL---GREVKFEGYDTILNE 99

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C+  R    G+ VH+ + ++   P+  +   LI LY+KC  L +A ++F  M  K ++VS
Sbjct: 100 CVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMPQK-NVVS 158

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W++MIS+Y  RG   +A+++FVEML     PN + F+ ++ +C  +     G  I+   +
Sbjct: 159 WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAI 218

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           K  Y +S + VG +L+DM+ K S  +  A+ VF  + E++ V  T +I+   Q+G   +A
Sbjct: 219 KRNY-ESHMFVGSSLLDMYAK-SGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEA 276

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           ++LF  + + G   +  T + V++A S L     GKQ+HS  +R+G    V +  SL+DM
Sbjct: 277 LKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDM 336

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAP 386
           Y+KC   G+V  +R++FD M +   +SW A++ GY +  G  +E ++LF  M  + +V P
Sbjct: 337 YSKC---GNVCYARRIFDSMPERTCISWNAMLVGYSKH-GMAREVLELFKLMREENKVKP 392

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
           +  T+ +VL  C +    ++  +++ + V     ++  +G+   ++ +  R+GR+E+A
Sbjct: 393 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 450



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 230/441 (52%), Gaps = 17/441 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           +  ++  C +   +  G  ++  ++K  Y  S V +   LI ++ K    L  A ++FD+
Sbjct: 93  YDTILNECVSQRAIREGQRVHTHMIKTCYLPS-VYLRTRLIVLYNKCDC-LGDAREMFDE 150

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M +KN V WT MI+  +Q G   +A+ LF++M+ S   P+ FT + ++++C     F +G
Sbjct: 151 MPQKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETG 210

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+HS AI+      + VG SL+DMYAK    G + D+  VF  + + +V++ TAII+GY
Sbjct: 211 RQIHSIAIKRNYESHMFVGSSLLDMYAK---SGRICDAHGVFHCLPERDVVACTAIISGY 267

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q  G D+EA+KLF  +    +  N  T+ASVL A   L   N  +QV++H ++ G+   
Sbjct: 268 AQM-GLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 326

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-E 481
             + NSLI MY++ G +  AR+ F+S+ E+  +S+N M+  Y+K+  + +  EL   + E
Sbjct: 327 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 386

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII--KSGFESNHCIYNALISMYSRCAN 539
           +  V   + T+ ++LSG S       G +I   ++  K G E +   Y  ++ +  R   
Sbjct: 387 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 446

Query: 540 VEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKP-NGITYIAVL 597
           VE AF   K+M      + W S++     H      + +  K+L   ++P N   Y+ + 
Sbjct: 447 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVILS 504

Query: 598 SACSHAGLISEGWKHFRSMYD 618
           +  + AG     W+  R++ D
Sbjct: 505 NLYASAG----KWEDMRNIRD 521



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 45/162 (27%), Positives = 90/162 (55%), Gaps = 1/162 (0%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           + ++L+   S  AI +G+++H  +IK+ +  +  +   LI +Y++C  +  A ++F EM 
Sbjct: 93  YDTILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDAREMFDEMP 152

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            +NV+SWT+MI+ +++ GFA  AL +F +ML    +PN  T+  +L++C +  L  E  +
Sbjct: 153 QKNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC-YGSLGFETGR 211

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
              S+  +      M   + ++D+  +SG + +A      +P
Sbjct: 212 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 253


>gi|359481919|ref|XP_003632692.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g13770, mitochondrial-like [Vitis vinifera]
          Length = 1053

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 234/593 (39%), Positives = 371/593 (62%), Gaps = 6/593 (1%)

Query: 271  FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
             L+M + G   +      V++ C        G+++H+  I+T     V +   L+ +Y K
Sbjct: 465  LLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNK 524

Query: 331  CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
            C   G   D+R+V D M + NV+SWTA+I+GY Q G    EA+ LF +M+    APN FT
Sbjct: 525  CRCLG---DARRVLDEMPERNVVSWTAMISGYSQRG-YASEALHLFVEMLMSGTAPNEFT 580

Query: 391  FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
            FA+VL +C +     +  Q+++  +K        VG+SL+ MYA++G++ +AR+ F+ L 
Sbjct: 581  FATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640

Query: 451  EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            E+++VS   ++  YA+    E+A +L   ++  G+ ++  T+AS+L+  S + A+  G Q
Sbjct: 641  ERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQ 700

Query: 511  IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
            +H+ ++++       + N+LI MYS+C ++  + ++F  M +R VISW +M+ G++KHG 
Sbjct: 701  VHSHVLRAKLPFYVVLQNSLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGL 760

Query: 571  AARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH-GIVQRMEH 628
               A+E+F  M  +  +KP+ +T++AVLS CSH G+   G + F  M ++  G    +EH
Sbjct: 761  GREAVELFKLMKEENKVKPDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEH 820

Query: 629  YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
            Y C+VDL GR+G + EA EFI+ MP      +W + LGACRVH +  +G+  A  +LE +
Sbjct: 821  YGCVVDLFGRAGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIE 880

Query: 689  PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
             ++   +++LSNLYASAG W+ V  +R+ MKE+ +IKE G SWIE D  +H FH  + SH
Sbjct: 881  SENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSH 940

Query: 749  PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
            P+  E++A++ +L++KIKE GY+P+ + VL+++++EQK + L  HSEK+A+AFGLI T  
Sbjct: 941  PRKEEVFAKVRELSIKIKEAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPG 1000

Query: 809  SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              P+R+ KNLR+C DCH   K++S V GRE+ LRD NRFHHI  G CSC DYW
Sbjct: 1001 GTPVRIIKNLRICVDCHNFAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 1053



 Score =  215 bits (548), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 174/593 (29%), Positives = 283/593 (47%), Gaps = 72/593 (12%)

Query: 21  SNP-SRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLD 79
           SNP SRQ +  S+ P     P      SNR        ++++A+  + +   +G   +  
Sbjct: 432 SNPFSRQRILLSTFPA--NSPDLKTLCSNR--------QLKEALLEMGI---QGLEVEFQ 478

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
            Y  +L  CI       G+ VH+ + ++  EP   +   LI LY+KC  L +A ++   M
Sbjct: 479 GYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEM 538

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +R++VSW++MIS Y  RG   +A+H+FVEML  G  PNE+ F+ V+ +C+++    +G
Sbjct: 539 -PERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLG 597

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+  ++K   F+S + VG +L+DM+ K     E A +VFD + E++ V  T +I+   
Sbjct: 598 RQIHSLVIKTS-FESHIFVGSSLLDMYAKAGKICE-ARRVFDGLPERDVVSCTAIISGYA 655

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           QLG   +A+ LF  +   G   +  T + V++A S L     G+Q+HS  +R  L   V 
Sbjct: 656 QLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVV 715

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +  SL+DMY+KC   GS+  SR++FD M +  V+SW A++ GY +  G  +EAV+LF  M
Sbjct: 716 LQNSLIDMYSKC---GSLTYSRRIFDSMPERTVISWNAMLVGYSKH-GLGREAVELFKLM 771

Query: 380 I-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
             + +V P+  TF +VL  C             +H     R L+         ++     
Sbjct: 772 KEENKVKPDSVTFLAVLSGC-------------SHGGMEDRGLE---------IFYEMVN 809

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
            +D        FE  +  Y  +VD + +    E+AFE + ++       +A  + SLL  
Sbjct: 810 QKDG-------FEPEIEHYGCVVDLFGRAGRVEEAFEFIKKMP---FEPTAAIWGSLLGA 859

Query: 499 ASSIGAIGKGEQIHARI--IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
                 +  GE +  R+  I+S    N+ I + L +   R  +V    ++ KE   + VI
Sbjct: 860 CRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKE---KAVI 916

Query: 557 -----SWTSMITGFAKHGFAA------RALEIFYKMLADGIKPNGITYIAVLS 598
                SW  +      H F A      R  E+F K+    IK     Y+  LS
Sbjct: 917 KEPGRSWIELDQTL--HTFHASDRSHPRKEEVFAKVRELSIKIKEAGYVPELS 967



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/179 (29%), Positives = 99/179 (55%), Gaps = 1/179 (0%)

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           E L E+   G+      + S+L+   S  AI +G+++HA +IK+ +E    +   LI +Y
Sbjct: 463 EALLEMGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLY 522

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C  +  A +V  EM +RNV+SWT+MI+G+++ G+A+ AL +F +ML  G  PN  T+ 
Sbjct: 523 NKCRCLGDARRVLDEMPERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFA 582

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            VL++C+ +     G +   S+  +      +   + ++D+  ++G + EA      +P
Sbjct: 583 TVLTSCTSSSGFQLG-RQIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 640


>gi|358343602|ref|XP_003635889.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|358344096|ref|XP_003636129.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355501824|gb|AES83027.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355502064|gb|AES83267.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 662

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 261/682 (38%), Positives = 399/682 (58%), Gaps = 24/682 (3%)

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
           C++++I  C+N +++     ++  +LK G   S    G  LID ++K SV  E A K+FD
Sbjct: 3   CYTSLIAQCTNKKSLTTLKSLHTHILKSGSLFS--FFGHKLIDGYIKCSVITE-ARKLFD 59

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           +M  ++ V W  MI+     G  ++AI L+ +M+  G LPD +T S +  A SE+ +   
Sbjct: 60  EMPNRHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSRE 119

Query: 302 GKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           G++ H  A+  G  + D  V   +VDMYAK    G + D+R VFDR+LD +V+ +TA+I 
Sbjct: 120 GQKAHGLAVVLGFEVSDGFVATGIVDMYAKF---GKMKDARFVFDRVLDKDVVLFTALIV 176

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY Q G  D EA+++F DM+  ++ PN +T ASVL +CGNL D    + ++   VK G  
Sbjct: 177 GYNQHG-LDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLE 235

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  SL++MY++   +ED+ K F SL   + V++ + +    +N   E A  +  E+
Sbjct: 236 SVVASQTSLLTMYSKCNMVEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREM 295

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
               +  + +T +S+L   SS+  +  GEQIHA  +K G + N  +  ALI +Y +C NV
Sbjct: 296 MRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCGNV 355

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           E A  VF  + + +++S  +MI  +A++GF   ALE+F ++   G++PN +T+I++L AC
Sbjct: 356 EKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILLAC 415

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++AGL+ EG + F  + + H I    +HY CM+DLLGR+    EA   I     + DV+ 
Sbjct: 416 NNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK-NPDVIQ 474

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           WRT L AC++HG+ E+ +   + +L+Q P+D   HILL+N+YASAG W+ V  ++   ++
Sbjct: 475 WRTLLNACKIHGEVEMAEKFMKKMLDQAPRDGGTHILLTNIYASAGKWDNVIEMKSAGRD 534

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             L K    SW++ D +VH F  G+ SHP+  EI   L +L  K+   GY PDT FVL +
Sbjct: 535 LRLKKTPAMSWVDIDREVHTFMAGDLSHPRAHEISEMLHELIEKVITLGYNPDTKFVLQD 594

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           LEEE+K+  L+ HSEK+A+AF L  T  K+  IR+FKNLRVCGD               I
Sbjct: 595 LEEEKKISALYYHSEKLAIAFALWKTCGKNTAIRIFKNLRVCGD--------------YI 640

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           + RD+ RFHH K G CSC DYW
Sbjct: 641 IARDAKRFHHFKGGICSCKDYW 662



 Score =  272 bits (695), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 175/533 (32%), Positives = 288/533 (54%), Gaps = 19/533 (3%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           ++ Y+ L+  C   ++    K +H+ + +S     S   + LI  Y KC  + EA K+F 
Sbjct: 1   MNCYTSLIAQCTNKKSLTTLKSLHTHILKSG-SLFSFFGHKLIDGYIKCSVITEARKLFD 59

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M N R IV+W+SMISS+V+RGK  +AI ++  ML  G  P+ Y FSA+ +A S      
Sbjct: 60  EMPN-RHIVTWNSMISSHVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSR 118

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G   +G  +  G+  SD  V   ++DM+ K    ++ A  VFD++ +K+ V +T +I  
Sbjct: 119 EGQKAHGLAVVLGFEVSDGFVATGIVDMYAKFG-KMKDARFVFDRVLDKDVVLFTALIVG 177

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G   +A+ +F DM+ S   P+ +TL+ V+ +C  L    +GK +H   ++ GL   
Sbjct: 178 YNQHGLDGEALEVFEDMVGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYGLESV 237

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V    SL+ MY+KC +   V+DS KVF+ +   + ++WT+ I G VQ+ GR++ A+ +F 
Sbjct: 238 VASQTSLLTMYSKCNM---VEDSIKVFNSLAYASHVTWTSFIVGLVQN-GREEVALSMFR 293

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           +M++  ++PNHFT +S+L AC +L      EQ++   VK G   +  V  +LI +Y + G
Sbjct: 294 EMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKCG 353

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            +E AR  F+SL E ++VS NTM+ AYA+N    +A EL   ++  G+  +  TF S+L 
Sbjct: 354 NVEKARSVFDSLTELDIVSINTMIYAYAQNGFGHEALELFERLKKLGLEPNVVTFISILL 413

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCI------YNALISMYSRCANVEAAFQVFKEME 551
             ++ G + +G QI + I      +NH I      Y  +I +  R    E A  + +E +
Sbjct: 414 ACNNAGLVEEGCQIFSLI-----RNNHSIELTRDHYTCMIDLLGRAKRFEEATMLIEEGK 468

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           + +VI W +++     HG    A E F K + D    +G T+I + +  + AG
Sbjct: 469 NPDVIQWRTLLNACKIHGEVEMA-EKFMKKMLDQAPRDGGTHILLTNIYASAG 520



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 217/417 (52%), Gaps = 17/417 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE-P 111
           H++ G+ ++AI     M  +G  PD  T+S + K+         G+  H L      E  
Sbjct: 76  HVSRGKTKEAIELYSNMLFEGVLPDAYTFSAIFKAFSEMGVSREGQKAHGLAVVLGFEVS 135

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +   ++ +Y+K G + +A  +F  + +K D+V ++++I  Y   G   +A+ +F +M
Sbjct: 136 DGFVATGIVDMYAKFGKMKDARFVFDRVLDK-DVVLFTALIVGYNQHGLDGEALEVFEDM 194

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           +     PNEY  ++V+ +C N  ++  G +I+G ++K G  +S V    +L+ M+ K ++
Sbjct: 195 VGSRIKPNEYTLASVLVSCGNLGDLVNGKLIHGLVVKYG-LESVVASQTSLLTMYSKCNM 253

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E + KVF+ +   + V WT  I    Q G    A+ +F +M+     P+ FTLS ++ 
Sbjct: 254 -VEDSIKVFNSLAYASHVTWTSFIVGLVQNGREEVALSMFREMMRCSISPNHFTLSSILH 312

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L +  +G+Q+H+  ++ G+  +  V  +L+ +Y KC   G+V+ +R VFD + + +
Sbjct: 313 ACSSLAMLEAGEQIHAVTVKLGVDGNKFVDAALIHLYGKC---GNVEKARSVFDSLTELD 369

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++S   +I  Y Q+ G   EA++LF  + +  + PN  TF S+L AC N        Q++
Sbjct: 370 IVSINTMIYAYAQN-GFGHEALELFERLKKLGLEPNVVTFISILLACNNAGLVEEGCQIF 428

Query: 412 T-----HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
           +     H+++  R    C    +I +  R+ R E+A    E     +++ + T+++A
Sbjct: 429 SLIRNNHSIELTRDHYTC----MIDLLGRAKRFEEATMLIEEGKNPDVIQWRTLLNA 481



 Score = 71.6 bits (174), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 97/205 (47%), Gaps = 2/205 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR + A+     M +    P+  T S +L +C        G+ +H++  +  ++ N 
Sbjct: 280 VQNGREEVALSMFREMMRCSISPNHFTLSSILHACSSLAMLEAGEQIHAVTVKLGVDGNK 339

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  +LI LY KCG++ +A  +F S+  + DIVS ++MI +Y   G   +A+ +F  + +
Sbjct: 340 FVDAALIHLYGKCGNVEKARSVFDSL-TELDIVSINTMIYAYAQNGFGHEALELFERLKK 398

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           LG  PN   F +++ AC+N   V  G  I+  +      +        +ID+  +     
Sbjct: 399 LGLEPNVVTFISILLACNNAGLVEEGCQIFSLIRNNHSIELTRDHYTCMIDLLGRAK-RF 457

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRC 258
           E A  + ++    + + W  ++  C
Sbjct: 458 EEATMLIEEGKNPDVIQWRTLLNAC 482


>gi|225442904|ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  484 bits (1247), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/665 (37%), Positives = 387/665 (58%), Gaps = 43/665 (6%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+E A  VFD M   N   W  MI   +++GCP  A+ ++ +M+  G +PD +T   ++ 
Sbjct: 68  DMEYARMVFDTMPGPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLK 127

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
             +       G++LH   ++ G + +V V  +L+ +Y   ++ G V  +R VFDR    +
Sbjct: 128 RFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLY---SLSGEVSVARGVFDRSSKGD 184

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V++W  +I+GY +S   D E++KLF +M + +V P+  T  SVL AC  L D NV ++V+
Sbjct: 185 VVTWNVMISGYNRSKQFD-ESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVH 243

Query: 412 THA----VKRGRALDDCVGNSLISMYARSGRMEDA------------------------- 442
            +     ++  R L+    N+LI MYA  G M+ A                         
Sbjct: 244 RYVKDLKIEPVRVLE----NALIDMYAACGDMDTALGIFDNMKSRDVISWTAIVTGFTNL 299

Query: 443 ------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
                 R  F+ + E++ VS+  M+D Y +    ++   L  E++   +    +T  S+L
Sbjct: 300 GQVGLARNYFDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSIL 359

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           +  + +GA+  GE I A I K+  + +  + NALI MY  C NVE A ++F  M  R+ I
Sbjct: 360 TACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKI 419

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SWT++I G A +G+   AL++F +ML   I P+ +T I VL AC+H+G++ +G K F  M
Sbjct: 420 SWTAVIFGLAINGYGEEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARM 479

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +HGI   + HY CMVDLLGR+G L EA E I++MP+  + +VW + LGACRVH D E+
Sbjct: 480 TTQHGIEPNVAHYGCMVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEM 539

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            + AA+ ILE +P++ A ++LL N+YA+   WE +  +RK M +R + K  GCS IE + 
Sbjct: 540 AEMAAQQILELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGIKKTPGCSLIEMNG 599

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
            VH+F  G+  HP++ EIY++LD++++ +K  GY PDT+ V  ++ EE+K   +++HSEK
Sbjct: 600 SVHEFVAGDQVHPQSKEIYSKLDEMSVDLKFAGYSPDTSEVFLDIGEEEKESAVYRHSEK 659

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +A+AFGLIS+     IR+ KNLR+C DCH   K +S V  RE+++RD  RFHH + G CS
Sbjct: 660 LAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRHGSCS 719

Query: 857 CNDYW 861
           C DYW
Sbjct: 720 CKDYW 724



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 149/556 (26%), Positives = 262/556 (47%), Gaps = 49/556 (8%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK--CGDLNEANKIFKSMGN 141
           L+K+C   ++    K +HS    + L  N ++   +I+   K   GD+  A  +F +M  
Sbjct: 25  LIKTC---KSMAQLKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMPG 81

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
               V W++MI  Y   G    A+ M+ EMLE G  P+EY +  +++  +    V  G  
Sbjct: 82  PNHFV-WNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++  ++K G F S+V V  ALI ++ + G V +  A  VFD+ ++ + V W +MI+   +
Sbjct: 141 LHDHIVKLG-FSSNVFVQNALIHLYSLSGEVSV--ARGVFDRSSKGDVVTWNVMISGYNR 197

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                ++++LF +M     LP   TL  V+SACS+L+    GK++H +     +     +
Sbjct: 198 SKQFDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVL 257

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-------------- 366
             +L+DMYA C   G +D +  +FD M   +V+SWTAI+TG+   G              
Sbjct: 258 ENALIDMYAAC---GDMDTALGIFDNMKSRDVISWTAIVTGFTNLGQVGLARNYFDKMPE 314

Query: 367 ----------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
                            R KE + LF +M    + P+ FT  S+L AC +L    + E +
Sbjct: 315 RDFVSWTAMIDGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWI 374

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
             +  K    +D  VGN+LI MY   G +E A + F ++  ++ +S+  ++   A N   
Sbjct: 375 KAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGLAINGYG 434

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNA 529
           E+A ++  ++    +     T   +L   +  G + KG++  AR+  + G E N   Y  
Sbjct: 435 EEALDMFSQMLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGC 494

Query: 530 LISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ++ +  R  +++ A +V K M  + N I W S++     H     A E+  + + +    
Sbjct: 495 MVDLLGRAGHLKEAHEVIKNMPVKPNSIVWGSLLGACRVHRDEEMA-EMAAQQILELEPE 553

Query: 589 NGITYIA---VLSACS 601
           NG  Y+    + +AC+
Sbjct: 554 NGAVYVLLCNIYAACN 569



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 143/519 (27%), Positives = 240/519 (46%), Gaps = 74/519 (14%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  PD  TY  LLK   R      G+ +H  + +     N  + N+LI LYS  G+
Sbjct: 110 MLERGVMPDEYTYPFLLKRFTRDTAVKCGRELHDHIVKLGFSSNVFVQNALIHLYSLSGE 169

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD-AIHMFVEMLELGFCPNEYCFSAVI 187
           ++ A  +F    +K D+V+W+ MIS Y NR KQ D ++ +F EM  +   P+     +V+
Sbjct: 170 VSVARGVFDR-SSKGDVVTWNVMISGY-NRSKQFDESMKLFDEMERMRVLPSSITLVSVL 227

Query: 188 RACSNTENVAIGHIIYGFL--LK-----------------CGYFDS-----------DVC 217
            ACS  +++ +G  ++ ++  LK                 CG  D+           DV 
Sbjct: 228 SACSKLKDLNVGKRVHRYVKDLKIEPVRVLENALIDMYAACGDMDTALGIFDNMKSRDVI 287

Query: 218 VGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
              A++  F   G V L   Y  FDKM E++ V WT MI    Q+   ++ + LF +M  
Sbjct: 288 SWTAIVTGFTNLGQVGLARNY--FDKMPERDFVSWTAMIDGYLQVNRFKEVLSLFREMQA 345

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +   PD FT+  +++AC+ L     G+ + ++  +  + +D  VG +L+DMY  C   G+
Sbjct: 346 ANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIKIDSFVGNALIDMYFNC---GN 402

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           V+ + ++F+ M   + +SWTA+I G +   G  +EA+ +FS M++  + P+  T   VL 
Sbjct: 403 VEKAIRIFNAMPHRDKISWTAVIFG-LAINGYGEEALDMFSQMLKASITPDEVTCIGVLC 461

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC             TH                 S     G+   AR   +   E N+  
Sbjct: 462 AC-------------TH-----------------SGMVDKGKKFFARMTTQHGIEPNVAH 491

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           Y  MVD   +  + ++A E+   I++  V  ++  + SLL GA  +    +  ++ A+ I
Sbjct: 492 YGCMVDLLGRAGHLKEAHEV---IKNMPVKPNSIVWGSLL-GACRVHRDEEMAEMAAQQI 547

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
                 N  +Y  L ++Y+ C   E   +V K M DR +
Sbjct: 548 LELEPENGAVYVLLCNIYAACNRWEKLHEVRKLMMDRGI 586



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 106/420 (25%), Positives = 189/420 (45%), Gaps = 24/420 (5%)

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS--GRMEDARKAFESLF 450
           S++K C ++      +Q+++  +  G   +  V   +I+   +   G ME AR  F+++ 
Sbjct: 24  SLIKTCKSMAQ---LKQIHSQTICTGLISNPIVPAQIIAFCCKHELGDMEYARMVFDTMP 80

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
             N   +N M+  Y++      A  +  E+ + GV    YT+  LL   +   A+  G +
Sbjct: 81  GPNHFVWNNMIKGYSRVGCPNSAVSMYCEMLERGVMPDEYTYPFLLKRFTRDTAVKCGRE 140

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H  I+K GF SN  + NALI +YS    V  A  VF      +V++W  MI+G+ +   
Sbjct: 141 LHDHIVKLGFSSNVFVQNALIHLYSLSGEVSVARGVFDRSSKGDVVTWNVMISGYNRSKQ 200

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              ++++F +M    + P+ IT ++VLSACS    ++ G +  R + D      R+   A
Sbjct: 201 FDESMKLFDEMERMRVLPSSITLVSVLSACSKLKDLNVGKRVHRYVKDLKIEPVRVLENA 260

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
            ++D+    G +  AL    +M  S DV+ W   +      G   L ++  + + E+D  
Sbjct: 261 -LIDMYAACGDMDTALGIFDNMK-SRDVISWTAIVTGFTNLGQVGLARNYFDKMPERDFV 318

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE--AGCSWIEADNKVHKFHVGETSH 748
              A I   + Y     ++ V ++ + M+  N+  +     S + A   +    +GE   
Sbjct: 319 SWTAMI---DGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEW-- 373

Query: 749 PKTLEIYAELDQLALKIKEF--GYLPDTNFVLHELEEEQKVQYLFQHSEKI---AVAFGL 803
                I A +D+  +KI  F    L D  F    +E+  ++     H +KI   AV FGL
Sbjct: 374 -----IKAYIDKNEIKIDSFVGNALIDMYFNCGNVEKAIRIFNAMPHRDKISWTAVIFGL 428



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 105/209 (50%), Gaps = 8/209 (3%)

Query: 56  DGRVQ----KAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
           DG +Q    K + +L    Q  N  PD  T   +L +C       LG+ + + + +++++
Sbjct: 325 DGYLQVNRFKEVLSLFREMQAANIKPDEFTMVSILTACAHLGALELGEWIKAYIDKNEIK 384

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            +S + N+LI +Y  CG++ +A +IF +M + RD +SW+++I      G   +A+ MF +
Sbjct: 385 IDSFVGNALIDMYFNCGNVEKAIRIFNAMPH-RDKISWTAVIFGLAINGYGEEALDMFSQ 443

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML+    P+E     V+ AC+++  V  G   +  +      + +V     ++D+  +  
Sbjct: 444 MLKASITPDEVTCIGVLCACTHSGMVDKGKKFFARMTTQHGIEPNVAHYGCMVDLLGRAG 503

Query: 231 VDLESAYKVFDKMTEK-NTVGWTLMITRC 258
             L+ A++V   M  K N++ W  ++  C
Sbjct: 504 -HLKEAHEVIKNMPVKPNSIVWGSLLGAC 531


>gi|449499218|ref|XP_004160754.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/703 (35%), Positives = 421/703 (59%), Gaps = 18/703 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--VILNSLISLYSKCGDLNEANKIFKSMGN 141
           LL+ C+ +R     K VH  L +SK   +   V+LN +   YSKC D++ A ++F  M +
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQM-S 132

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R+  SW+ +I+     G  +D    F EM   G  P+++ +S +++ C   +++ +G++
Sbjct: 133 QRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNM 192

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++  ++  G F S   V  AL++M+ K   ++E +YKVF+ MTE N V W  MIT  T  
Sbjct: 193 VHAQIVIRG-FTSHTFVSTALLNMYAKLQ-EIEDSYKVFNTMTEVNVVSWNAMITGFTSN 250

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
               DA  LFL M+  G  PD  T  GV  A   L      K++  +A+  G+  +  VG
Sbjct: 251 DLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVG 310

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM-----SWTAIITGYVQSGGRDKEAVKLF 376
            +L+DM +KC   GS+ ++R +F+    H +       W A+I+GY++SG  +K A++LF
Sbjct: 311 TALIDMNSKC---GSLQEARSIFN---SHFITCRFNAPWNAMISGYLRSGFNEK-ALELF 363

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYAR 435
           + M Q  +  +H+T+ SV  A   L   ++ ++V+  A+K G  ++   + N++ + YA+
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +ED RK F  + +++L+S+ ++V AY++    +KA E+   +   G+  + +TF+S+
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   +++  +  G+Q+H  I K G + + CI +AL+ MY++C  +  A +VF  + + + 
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SWT++I G A+HG    AL++F +M+  G++PN +T++ VL ACSH GL+ EG ++F+ 
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M   +G+V  MEHYAC+VDLL R G L +A+EFI  MP+  + +VW+T LGACRVHG+ E
Sbjct: 604 MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           LG+ AA+ IL    ++ A ++LLSN Y  +G ++   ++R  MKE+ + KE GCSWI  +
Sbjct: 664 LGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHVMKEQGVKKEPGCSWISVN 723

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
             +HKF+ G+  HP+  +IYA+L++L LK+     +PD ++ L
Sbjct: 724 GTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 163/563 (28%), Positives = 295/563 (52%), Gaps = 22/563 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  PD   YS +L+ CI   +  LG +VH+ +       ++ +  +L+++Y+K  +
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + ++ K+F +M  + ++VSW++MI+ + +    +DA  +F+ M+  G  P+   F  V +
Sbjct: 222 IEDSYKVFNTM-TEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAK 280

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDK--MTE 245
           A     +V     + G+ L+ G  DS+  VG ALIDM  K GS  L+ A  +F+   +T 
Sbjct: 281 AIGMLRDVNKAKEVSGYALELG-VDSNTLVGTALIDMNSKCGS--LQEARSIFNSHFITC 337

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +    W  MI+   + G    A+ LF  M  +    D +T   V +A + L+  + GK++
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397

Query: 306 HSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           H+ AI++GL ++ V +  ++ + YAKC   GS++D RKVF+RM D +++SWT+++T Y Q
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKC---GSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
               DK A+++FS+M    +APN FTF+SVL +C NL      +QV+    K G  +D C
Sbjct: 455 CSEWDK-AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKC 513

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           + ++L+ MYA+ G + DA+K F  +   + VS+  ++  +A++   + A +L   +   G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG 573

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----ESNHCIYNALISMYSRCANV 540
           V  +A TF  +L   S  G + +G Q + +++K  +    E  H  Y  ++ + SR  ++
Sbjct: 574 VEPNAVTFLCVLFACSHGGLVEEGLQ-YFKLMKKTYGLVPEMEH--YACIVDLLSRVGHL 630

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
             A +    M  + N + W +++     HG      E+  + +      N  TY+ + + 
Sbjct: 631 NDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELG-ELAAQKILSFKAENSATYVLLSNT 689

Query: 600 CSHAGLISEGWKHFRSMYDEHGI 622
              +G   +G    R +  E G+
Sbjct: 690 YIESGSYKDGLS-LRHVMKEQGV 711



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 165/318 (51%), Gaps = 9/318 (2%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P +  +  +L  G  +KA+     M Q   + D  TY  +  +    +   LGK VH+  
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401

Query: 105 TRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
            +S LE N V I N++ + Y+KCG L +  K+F  M + RD++SW+S++++Y    +   
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED-RDLISWTSLVTAYSQCSEWDK 460

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           AI +F  M   G  PN++ FS+V+ +C+N   +  G  ++G + K G  D D C+  AL+
Sbjct: 461 AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG-LDMDKCIESALV 519

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           DM+ K    L  A KVF++++  +TV WT +I    Q G   DA++LF  M+  G  P+ 
Sbjct: 520 DMYAKCGC-LGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            T   V+ ACS   L   G Q      +T GL  ++     +VD+ ++    G ++D+ +
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRV---GHLNDAME 635

Query: 343 VFDRM-LDHNVMSWTAII 359
              RM ++ N M W  ++
Sbjct: 636 FISRMPVEPNEMVWQTLL 653



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 3/199 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           KAI     M  +G  P+  T+S +L SC        G+ VH ++ +  L+ +  I ++L+
Sbjct: 460 KAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALV 519

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y+KCG L +A K+F  + N  D VSW+++I+ +   G   DA+ +F  M++LG  PN 
Sbjct: 520 DMYAKCGCLGDAKKVFNRISNA-DTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             F  V+ ACS+   V  G   +  + K      ++     ++D+  +    L  A +  
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVG-HLNDAMEFI 637

Query: 241 DKM-TEKNTVGWTLMITRC 258
            +M  E N + W  ++  C
Sbjct: 638 SRMPVEPNEMVWQTLLGAC 656


>gi|449441574|ref|XP_004138557.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Cucumis sativus]
          Length = 766

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 249/703 (35%), Positives = 421/703 (59%), Gaps = 18/703 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--VILNSLISLYSKCGDLNEANKIFKSMGN 141
           LL+ C+ +R     K VH  L +SK   +   V+LN +   YSKC D++ A ++F  M +
Sbjct: 74  LLRDCVDARFLKQAKTVHGFLLKSKFSNHHSLVLLNHVAHAYSKCSDIDAACRLFDQM-S 132

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R+  SW+ +I+     G  +D    F EM   G  P+++ +S +++ C   +++ +G++
Sbjct: 133 QRNTFSWTVLIAGLAENGLFLDGFEFFCEMQSQGIFPDQFAYSGILQICIGLDSIELGNM 192

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++  ++  G F S   V  AL++M+ K   ++E +YKVF+ MTE N V W  MIT  T  
Sbjct: 193 VHAQIVIRG-FTSHTFVSTALLNMYAKLQ-EIEDSYKVFNTMTEVNVVSWNAMITGFTSN 250

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
               DA  LFL M+  G  PD  T  GV  A   L      K++  +A+  G+  +  VG
Sbjct: 251 DLYLDAFDLFLRMMGEGVTPDAQTFIGVAKAIGMLRDVNKAKEVSGYALELGVDSNTLVG 310

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM-----SWTAIITGYVQSGGRDKEAVKLF 376
            +L+DM +KC   GS+ ++R +F+    H +       W A+I+GY++SG  +K A++LF
Sbjct: 311 TALIDMNSKC---GSLQEARSIFN---SHFITCRFNAPWNAMISGYLRSGFNEK-ALELF 363

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYAR 435
           + M Q  +  +H+T+ SV  A   L   ++ ++V+  A+K G  ++   + N++ + YA+
Sbjct: 364 AKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARAIKSGLEVNYVSISNAVANAYAK 423

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +ED RK F  + +++L+S+ ++V AY++    +KA E+   +   G+  + +TF+S+
Sbjct: 424 CGSLEDVRKVFNRMEDRDLISWTSLVTAYSQCSEWDKAIEIFSNMRAEGIAPNQFTFSSV 483

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   +++  +  G+Q+H  I K G + + CI +AL+ MY++C  +  A +VF  + + + 
Sbjct: 484 LVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALVDMYAKCGCLGDAKKVFNRISNADT 543

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SWT++I G A+HG    AL++F +M+  G++PN +T++ VL ACSH GL+ EG ++F+ 
Sbjct: 544 VSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNAVTFLCVLFACSHGGLVEEGLQYFKL 603

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M   +G+V  MEHYAC+VDLL R G L +A+EFI  MP+  + +VW+T LGACRVHG+ E
Sbjct: 604 MKKTYGLVPEMEHYACIVDLLSRVGHLNDAMEFISRMPVEPNEMVWQTLLGACRVHGNVE 663

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           LG+ AA+ IL    ++ A ++LLSN Y  +G ++   ++R  MKE+ + KE GCSWI  +
Sbjct: 664 LGELAAQKILSFKAENSATYVLLSNTYIESGSYKDGLSLRHLMKEQGVKKEPGCSWISVN 723

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
             +HKF+ G+  HP+  +IYA+L++L LK+     +PD ++ L
Sbjct: 724 GTLHKFYAGDQQHPEKDKIYAKLEELKLKLISLDDVPDLSYEL 766



 Score =  241 bits (615), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 163/563 (28%), Positives = 295/563 (52%), Gaps = 22/563 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  PD   YS +L+ CI   +  LG +VH+ +       ++ +  +L+++Y+K  +
Sbjct: 162 MQSQGIFPDQFAYSGILQICIGLDSIELGNMVHAQIVIRGFTSHTFVSTALLNMYAKLQE 221

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + ++ K+F +M  + ++VSW++MI+ + +    +DA  +F+ M+  G  P+   F  V +
Sbjct: 222 IEDSYKVFNTM-TEVNVVSWNAMITGFTSNDLYLDAFDLFLRMMGEGVTPDAQTFIGVAK 280

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDK--MTE 245
           A     +V     + G+ L+ G  DS+  VG ALIDM  K GS  L+ A  +F+   +T 
Sbjct: 281 AIGMLRDVNKAKEVSGYALELG-VDSNTLVGTALIDMNSKCGS--LQEARSIFNSHFITC 337

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +    W  MI+   + G    A+ LF  M  +    D +T   V +A + L+  + GK++
Sbjct: 338 RFNAPWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKV 397

Query: 306 HSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           H+ AI++GL ++ V +  ++ + YAKC   GS++D RKVF+RM D +++SWT+++T Y Q
Sbjct: 398 HARAIKSGLEVNYVSISNAVANAYAKC---GSLEDVRKVFNRMEDRDLISWTSLVTAYSQ 454

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
               DK A+++FS+M    +APN FTF+SVL +C NL      +QV+    K G  +D C
Sbjct: 455 CSEWDK-AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKC 513

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           + ++L+ MYA+ G + DA+K F  +   + VS+  ++  +A++   + A +L   +   G
Sbjct: 514 IESALVDMYAKCGCLGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLG 573

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----ESNHCIYNALISMYSRCANV 540
           V  +A TF  +L   S  G + +G Q + +++K  +    E  H  Y  ++ + SR  ++
Sbjct: 574 VEPNAVTFLCVLFACSHGGLVEEGLQ-YFKLMKKTYGLVPEMEH--YACIVDLLSRVGHL 630

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
             A +    M  + N + W +++     HG      E+  + +      N  TY+ + + 
Sbjct: 631 NDAMEFISRMPVEPNEMVWQTLLGACRVHGNVELG-ELAAQKILSFKAENSATYVLLSNT 689

Query: 600 CSHAGLISEGWKHFRSMYDEHGI 622
              +G   +G    R +  E G+
Sbjct: 690 YIESGSYKDGLS-LRHLMKEQGV 711



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 99/318 (31%), Positives = 165/318 (51%), Gaps = 9/318 (2%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P +  +  +L  G  +KA+     M Q   + D  TY  +  +    +   LGK VH+  
Sbjct: 342 PWNAMISGYLRSGFNEKALELFAKMCQNDIYLDHYTYCSVFNAIAALKCLSLGKKVHARA 401

Query: 105 TRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
            +S LE N V I N++ + Y+KCG L +  K+F  M + RD++SW+S++++Y    +   
Sbjct: 402 IKSGLEVNYVSISNAVANAYAKCGSLEDVRKVFNRMED-RDLISWTSLVTAYSQCSEWDK 460

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           AI +F  M   G  PN++ FS+V+ +C+N   +  G  ++G + K G  D D C+  AL+
Sbjct: 461 AIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVG-LDMDKCIESALV 519

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           DM+ K    L  A KVF++++  +TV WT +I    Q G   DA++LF  M+  G  P+ 
Sbjct: 520 DMYAKCGC-LGDAKKVFNRISNADTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            T   V+ ACS   L   G Q      +T GL  ++     +VD+ ++    G ++D+ +
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRV---GHLNDAME 635

Query: 343 VFDRM-LDHNVMSWTAII 359
              RM ++ N M W  ++
Sbjct: 636 FISRMPVEPNEMVWQTLL 653



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 56/199 (28%), Positives = 98/199 (49%), Gaps = 3/199 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           KAI     M  +G  P+  T+S +L SC        G+ VH ++ +  L+ +  I ++L+
Sbjct: 460 KAIEIFSNMRAEGIAPNQFTFSSVLVSCANLCLLEYGQQVHGIICKVGLDMDKCIESALV 519

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y+KCG L +A K+F  + N  D VSW+++I+ +   G   DA+ +F  M++LG  PN 
Sbjct: 520 DMYAKCGCLGDAKKVFNRISNA-DTVSWTAIIAGHAQHGIVDDALQLFRRMVQLGVEPNA 578

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             F  V+ ACS+   V  G   +  + K      ++     ++D+  +    L  A +  
Sbjct: 579 VTFLCVLFACSHGGLVEEGLQYFKLMKKTYGLVPEMEHYACIVDLLSRVG-HLNDAMEFI 637

Query: 241 DKM-TEKNTVGWTLMITRC 258
            +M  E N + W  ++  C
Sbjct: 638 SRMPVEPNEMVWQTLLGAC 656


>gi|357501931|ref|XP_003621254.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355496269|gb|AES77472.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 700

 Score =  484 bits (1246), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 251/683 (36%), Positives = 406/683 (59%), Gaps = 17/683 (2%)

Query: 191 SNTENVAIGHIIYGFLL-------KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           +NT+N+  G  I+  LL          Y + ++    +LI+++VK S  L  A  +FD+M
Sbjct: 23  ANTKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCS-KLRLARYLFDEM 81

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
           + ++ V + +++      G   + ++LF +M+ S + P+ +  + V+SAC+       G 
Sbjct: 82  SLRSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGM 141

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-----DHNVMSWTAI 358
           Q H +  + GL     V  SLV MY+KC     VD + +V +        D++   + ++
Sbjct: 142 QCHGFLFKFGLVFHHFVKSSLVHMYSKCF---HVDLALQVLESEHGNIDNDNDAFCYNSV 198

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           +   V+SG R  EAV++   M+   V  +  T+ SV+  CG + D  +  QV+   +K G
Sbjct: 199 LNALVESG-RLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGG 257

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  VG+ L+ M+ + G +  ARK F+ L  +N+V + +++ AY +N   E+   LL 
Sbjct: 258 LTFDVFVGSMLVDMFGKCGDVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLS 317

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
            ++  G  ++ +TFA LL+  + + A+  G+ +HAR+ K G ++   + NALI+MYS+C 
Sbjct: 318 CMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKCG 377

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            +++++ VF +M +R++I+W +MI G+++HG   +AL +F  ML+ G  PN +T++ VLS
Sbjct: 378 CIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVLS 437

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           AC+H  L++EG+ +   +     +   +EHY C+V +L R+G L EA  F+R+  +  DV
Sbjct: 438 ACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCVVAVLCRAGMLEEAENFMRTTQVKWDV 497

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           + WR  L AC +H +  LG   AE IL+ DP+D   + LLSN+YA A  W+ V  IRK M
Sbjct: 498 VAWRVLLNACNIHRNYNLGTKIAETILQMDPRDMGTYTLLSNMYAKARSWDSVTMIRKMM 557

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           +ERN+ KE G SWIE  N VH F    ++HP+ ++IY ++  L   IK+ GY+P+   VL
Sbjct: 558 RERNVKKEPGVSWIEIRNAVHVFSSDGSNHPECIQIYNKVQLLLEMIKQLGYVPNIEAVL 617

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H++E+EQK  YL  HSEK+A+A+GL+      PIRV KNLR+C DCHTA+K IS VT R 
Sbjct: 618 HDVEDEQKESYLNYHSEKLAIAYGLMKIPSPAPIRVIKNLRICEDCHTAVKLISKVTNRL 677

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I++RD++RFHH +DG C+C D+W
Sbjct: 678 IIVRDASRFHHFRDGTCTCTDHW 700



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/498 (27%), Positives = 250/498 (50%), Gaps = 32/498 (6%)

Query: 91  SRNFHLGKLVHS-LLTRSK-------LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           ++N + GK +H+ LL R++        E N + LNSLI+LY KC  L  A  +F  M + 
Sbjct: 25  TKNLNFGKSIHTQLLIRNQSSTHHSYREFNIIQLNSLINLYVKCSKLRLARYLFDEM-SL 83

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R +VS++ ++  Y++ G+ ++ + +F  M+   + PNEY F+ V+ AC+++  V  G   
Sbjct: 84  RSVVSYNVLMGGYLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQC 143

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKG-SVD-----LESAYKVFDKMTEKNTVGWTLMIT 256
           +GFL K G       V  +L+ M+ K   VD     LES +   D   + +   +  ++ 
Sbjct: 144 HGFLFKFGLVFHHF-VKSSLVHMYSKCFHVDLALQVLESEHGNID--NDNDAFCYNSVLN 200

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              + G   +A+ +   M+  G + D  T   V+  C ++     G Q+H+  ++ GL  
Sbjct: 201 ALVESGRLGEAVEVLGRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGGLTF 260

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           DV VG  LVDM+ KC   G V  +RKVFD + + NV+ WT+++T Y+Q+ G  +E + L 
Sbjct: 261 DVFVGSMLVDMFGKC---GDVLSARKVFDGLQNRNVVVWTSLMTAYLQN-GEFEETLNLL 316

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
           S M +     N FTFA +L A   +      + ++    K G      VGN+LI+MY++ 
Sbjct: 317 SCMDREGTMSNEFTFAVLLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKC 376

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G ++ +   F  +  ++++++N M+  Y+++   ++A  L  ++   G   +  TF  +L
Sbjct: 377 GCIDSSYDVFFDMRNRDIITWNAMICGYSQHGLGKQALLLFQDMLSAGECPNHVTFVGVL 436

Query: 497 SGASSIGAIGKGEQIHARIIK-----SGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           S  + +  + +G     +++K      G E   C+    +++  R   +E A    +  +
Sbjct: 437 SACAHLALVNEGFYYLNQLMKHFKVEPGLEHYTCV----VAVLCRAGMLEEAENFMRTTQ 492

Query: 552 DR-NVISWTSMITGFAKH 568
            + +V++W  ++     H
Sbjct: 493 VKWDVVAWRVLLNACNIH 510



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 225/455 (49%), Gaps = 25/455 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L+ G   + +     M      P+   ++ +L +C  S     G   H  L +  L  +
Sbjct: 96  YLHSGEHLEVVKLFKNMVSSLYQPNEYVFTTVLSACAHSGRVFEGMQCHGFLFKFGLVFH 155

Query: 113 SVILNSLISLYSKCGDLNEANKIFKS----MGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
             + +SL+ +YSKC  ++ A ++ +S    + N  D   ++S++++ V  G+  +A+ + 
Sbjct: 156 HFVKSSLVHMYSKCFHVDLALQVLESEHGNIDNDNDAFCYNSVLNALVESGRLGEAVEVL 215

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
             M++ G   +   + +V+  C    ++ +G  ++  LLK G    DV VG  L+DMF K
Sbjct: 216 GRMVDEGVVWDSVTYVSVMGLCGQIRDLGLGLQVHAQLLKGG-LTFDVFVGSMLVDMFGK 274

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
              D+ SA KVFD +  +N V WT ++T   Q G   + + L   M   G + + FT + 
Sbjct: 275 CG-DVLSARKVFDGLQNRNVVVWTSLMTAYLQNGEFEETLNLLSCMDREGTMSNEFTFAV 333

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           +++A + +     G  LH+   + G+   V VG +L++MY+KC   G +D S  VF  M 
Sbjct: 334 LLNAFAGMAALRHGDLLHARVEKLGIKNRVIVGNALINMYSKC---GCIDSSYDVFFDMR 390

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA- 407
           + ++++W A+I GY Q  G  K+A+ LF DM+     PNH TF  VL AC +L   N   
Sbjct: 391 NRDIITWNAMICGYSQH-GLGKQALLLFQDMLSAGECPNHVTFVGVLSACAHLALVNEGF 449

Query: 408 ---EQVYTH-AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVD 462
               Q+  H  V+ G     CV    +++  R+G +E+A     +   K ++V++  +++
Sbjct: 450 YYLNQLMKHFKVEPGLEHYTCV----VAVLCRAGMLEEAENFMRTTQVKWDVVAWRVLLN 505

Query: 463 A--YAKNLN-SEKAFELLHEIEDTGVGTSAYTFAS 494
           A    +N N   K  E + +++   +GT  YT  S
Sbjct: 506 ACNIHRNYNLGTKIAETILQMDPRDMGT--YTLLS 538


>gi|449445401|ref|XP_004140461.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Cucumis sativus]
          Length = 697

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/679 (36%), Positives = 399/679 (58%), Gaps = 9/679 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLL--KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           +++  ++ +N+  G  I+  L      Y DS V    +LI+++VK   ++  A K+FD M
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCD-EVSIARKLFDSM 83

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSG 302
             +N V W+ ++    Q G P +   LF  M++     P+ + ++  +S+C   +++  G
Sbjct: 84  PRRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDS-QMYVEG 142

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ H +A+++GL     V  +L+ +Y+KC+  G+   + ++   +  +++  +  ++ G 
Sbjct: 143 KQCHGYALKSGLEFHQYVKNALIQLYSKCSDVGA---AIQILYTVPGNDIFCYNLVVNGL 199

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           +Q      EAV +   +I   +  N+ T+ ++ + C +L D  + +QV+   +K     D
Sbjct: 200 LQHTHM-AEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCD 258

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             +G+S+I MY + G +   R  F+ L  +N+VS+ +++ AY +N   E+A  L  ++E 
Sbjct: 259 VYIGSSIIDMYGKCGNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEI 318

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             +  + YT A L + A+ + A+  G+Q+HAR  KSG + N  + NALI MY +  ++ A
Sbjct: 319 DCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDILA 378

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  VF  M   N+I+W ++ITG + HG    AL +F  M+A G +PN +T+I V+ AC+H
Sbjct: 379 AQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILACAH 438

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
             L+ EG+ +F  +  +  IV  +EHY C+V LL RSG L EA  F+RS  ++ DV+ WR
Sbjct: 439 LKLVDEGFYYFNHLMKQFRIVPGLEHYTCIVGLLSRSGRLDEAENFMRSHQINWDVVSWR 498

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
           T L AC VH   + G+  AE +L+ +P+D   +ILLSN++A    W++V  IRK M+ERN
Sbjct: 499 TLLNACYVHKHYDKGRKIAEYLLQLEPRDVGTYILLSNMHARVRRWDHVVEIRKLMRERN 558

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           + KE G SW+E  N  H F   +  HP+   IY  +  L  KI+  GY+PD + VLH++E
Sbjct: 559 VKKEPGVSWLEIRNVAHVFTSEDIKHPEANLIYENVKDLLSKIRPLGYVPDIDNVLHDIE 618

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           +EQKV  L  HSEK+AVA+GL+ T    PI V KNLR+C DCHTAIK IS V  R IV+R
Sbjct: 619 DEQKVDNLSYHSEKLAVAYGLMKTPSGAPITVIKNLRMCDDCHTAIKLISKVANRVIVVR 678

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+NRFHH ++G CSC DYW
Sbjct: 679 DANRFHHFQNGCCSCGDYW 697



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/522 (26%), Positives = 263/522 (50%), Gaps = 25/522 (4%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLT---RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           LLK    ++N   G+ +H+ LT    +  +     LNSLI+LY KC +++ A K+F SM 
Sbjct: 25  LLKVAADAKNLKFGRTIHAHLTITNHNYRDSKVNQLNSLINLYVKCDEVSIARKLFDSMP 84

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIG 199
            +R++VSWS++++ Y+  G  ++   +F +M ++    PNEY  +  I +C +   V  G
Sbjct: 85  -RRNVVSWSALMAGYMQNGNPLEVFELFKKMVVKDNIFPNEYVIATAISSCDSQMYVE-G 142

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
              +G+ LK G  +    V  ALI ++ K S D+ +A ++   +   +   + L++    
Sbjct: 143 KQCHGYALKSG-LEFHQYVKNALIQLYSKCS-DVGAAIQILYTVPGNDIFCYNLVVNGLL 200

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q     +A+ +   +I  G   +  T   +   C+ L+  T GKQ+H+  +++ +  DV 
Sbjct: 201 QHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDVY 260

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +G S++DMY KC   G+V   R  FDR+   NV+SWT+II  Y Q+   + EA+ LFS M
Sbjct: 261 IGSSIIDMYGKC---GNVLSGRTFFDRLQSRNVVSWTSIIAAYFQNEFFE-EALNLFSKM 316

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               + PN +T A +  +   L    + +Q++  A K G   +  VGN+LI MY +SG +
Sbjct: 317 EIDCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSGLKGNVMVGNALIIMYFKSGDI 376

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             A+  F ++   N++++N ++  ++ +   ++A  +  ++  TG   +  TF  ++   
Sbjct: 377 LAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILAC 436

Query: 500 SSIGAIGKGEQIHARIIKS-----GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DR 553
           + +  + +G      ++K      G E   CI    + + SR   ++ A    +  + + 
Sbjct: 437 AHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCI----VGLLSRSGRLDEAENFMRSHQINW 492

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYI 594
           +V+SW +++     H    +  +I   +L   ++P  + TYI
Sbjct: 493 DVVSWRTLLNACYVHKHYDKGRKIAEYLLQ--LEPRDVGTYI 532



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 156/314 (49%), Gaps = 16/314 (5%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L    + +A+  L L+  +G   +  TY  + + C   ++  LGK VH+ + +S ++ + 
Sbjct: 200 LQHTHMAEAVDVLKLIISEGIEWNNATYVTIFRLCASLKDITLGKQVHAQMLKSDIDCDV 259

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I +S+I +Y KCG++      F  +   R++VSW+S+I++Y       +A+++F +M  
Sbjct: 260 YIGSSIIDMYGKCGNVLSGRTFFDRL-QSRNVVSWTSIIAAYFQNEFFEEALNLFSKMEI 318

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
               PNEY  + +  + +    + +G  ++    K G    +V VG ALI M+ K S D+
Sbjct: 319 DCIPPNEYTMAVLFNSAAGLSALCLGDQLHARAEKSG-LKGNVMVGNALIIMYFK-SGDI 376

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            +A  VF  MT  N + W  +IT  +  G  ++A+ +F DM+ +G  P+  T  GV+ AC
Sbjct: 377 LAAQSVFSNMTCCNIITWNAIITGHSHHGLGKEALSMFQDMMATGERPNYVTFIGVILAC 436

Query: 294 SELELFTSG-----KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF-DRM 347
           + L+L   G       +  + I  GL    C+    V + ++    G +D++        
Sbjct: 437 AHLKLVDEGFYYFNHLMKQFRIVPGLEHYTCI----VGLLSR---SGRLDEAENFMRSHQ 489

Query: 348 LDHNVMSWTAIITG 361
           ++ +V+SW  ++  
Sbjct: 490 INWDVVSWRTLLNA 503


>gi|224069617|ref|XP_002303012.1| predicted protein [Populus trichocarpa]
 gi|222844738|gb|EEE82285.1| predicted protein [Populus trichocarpa]
          Length = 815

 Score =  484 bits (1245), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/754 (34%), Positives = 433/754 (57%), Gaps = 15/754 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           NS  ++ +IS Y K G+L  A +IF    ++R +V+W++MI +Y    +  DA  +F EM
Sbjct: 73  NSFSIDIIISGYVKSGNLTVARRIFDDT-DERTVVAWTTMIGAYSKSNRFGDAFKLFAEM 131

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGS 230
              G  P+   +  ++  C++ E     +  +  ++K G+  +  VC    L+D + K  
Sbjct: 132 HRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHRVC--NTLLDSYFKTG 189

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             L+SA ++F +M   ++V + +MIT     G   +AI LF++M   GF P  FT + V+
Sbjct: 190 -GLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLGFKPSDFTFAAVI 248

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SA   L+    G+Q+H + ++T    +V VG + +D Y+K      V++ RK+F+ M + 
Sbjct: 249 SASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSK---HDCVNEVRKLFNEMPEL 305

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + +S+  IIT Y   G + KE++ LF ++        +F F ++L    + LD  +  Q+
Sbjct: 306 DGVSYNVIITAYAWVG-KVKESIDLFQELQFTTFDRKNFPFPTMLSIAASSLDLQMGRQL 364

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   V      D  V NSL+ MYA+ G+ E+A + F  L  ++ V +  M+ A  +    
Sbjct: 365 HAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLSSRSTVPWTAMISANVQRGLH 424

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN-- 528
           E   +L +E+    V     TFA +L  ++++ +I  G+Q+H+ +I+SGF +   +Y+  
Sbjct: 425 ENGLKLFYEMRRANVSADQATFACVLKASANLASILLGKQLHSCVIRSGFMN---VYSGC 481

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ MY+ CA+++ A + F+EM +RNV++W ++++ +A++G     L+ F +M+  G +P
Sbjct: 482 ALLDMYANCASIKDAIKTFEEMSERNVVTWNALLSAYAQNGDGKGTLKSFEEMIMSGYQP 541

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + ++++ +L+ACSH  L+ EG K+F  M   + +  + EHY  MVD L RSG   EA + 
Sbjct: 542 DSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKREHYTAMVDALCRSGRFDEAEKL 601

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASAGH 707
           +  MP   D +VW + L +CR+H +  L + AA  +      +D A ++ +SN++A AG 
Sbjct: 602 MGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQLFNMKVLRDAAPYVTMSNIFAEAGQ 661

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W+ V  ++K M++R + K    SW+E  +KVH F   +  HP+ LEI  +++ LA ++++
Sbjct: 662 WDSVVKVKKAMRDRGVRKLPAYSWVEIKHKVHVFSANDDKHPQQLEILRKIEMLAEQMEK 721

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY PD +     +++E K+  L  HSE++A+AF LI+T +  PI V KNLR C DCH A
Sbjct: 722 EGYDPDISCAHQNVDKESKIDSLKYHSERLAIAFALINTPEGSPILVMKNLRACTDCHAA 781

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IK IS + GREI +RDSNRFHH +DG CSC DYW
Sbjct: 782 IKVISKIVGREITVRDSNRFHHFRDGSCSCGDYW 815



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 213/419 (50%), Gaps = 22/419 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + N+G  ++AI     M   G  P   T++ ++ + +   +   G+ +H  + ++    N
Sbjct: 216 YANNGLNEEAIELFVEMQNLGFKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRN 275

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+ +  YSK   +NE  K+F  M  + D VS++ +I++Y   GK  ++I +F E+ 
Sbjct: 276 VFVGNAFLDFYSKHDCVNEVRKLFNEMP-ELDGVSYNVIITAYAWVGKVKESIDLFQELQ 334

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
              F    + F  ++   +++ ++ +G  ++  ++     D D  V  +L+DM+ K    
Sbjct: 335 FTTFDRKNFPFPTMLSIAASSLDLQMGRQLHAQVV-VSMADPDFRVSNSLVDMYAKCG-K 392

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E A ++F +++ ++TV WT MI+   Q G   + ++LF +M  +    D+ T + V+ A
Sbjct: 393 FEEADRIFLRLSSRSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKA 452

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L     GKQLHS  IR+G  ++V  GC+L+DMYA C    S+ D+ K F+ M + NV
Sbjct: 453 SANLASILLGKQLHSCVIRSGF-MNVYSGCALLDMYANC---ASIKDAIKTFEEMSERNV 508

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN-------LLDSN 405
           ++W A+++ Y Q+G   K  +K F +MI     P+  +F  +L AC +       L   N
Sbjct: 509 VTWNALLSAYAQNGD-GKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFN 567

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
               VY  A KR          +++    RSGR ++A K    + FE + + + +++++
Sbjct: 568 DMSGVYNLAPKREHY------TAMVDALCRSGRFDEAEKLMGQMPFEPDEIVWTSVLNS 620



 Score =  132 bits (332), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 167/325 (51%), Gaps = 13/325 (4%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           +  +L     S +  +G+ +H+ +  S  +P+  + NSL+ +Y+KCG   EA++IF  + 
Sbjct: 345 FPTMLSIAASSLDLQMGRQLHAQVVVSMADPDFRVSNSLVDMYAKCGKFEEADRIFLRLS 404

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
           + R  V W++MIS+ V RG   + + +F EM       ++  F+ V++A +N  ++ +G 
Sbjct: 405 S-RSTVPWTAMISANVQRGLHENGLKLFYEMRRANVSADQATFACVLKASANLASILLGK 463

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++  +++ G+   +V  GCAL+DM+      ++ A K F++M+E+N V W  +++   Q
Sbjct: 464 QLHSCVIRSGFM--NVYSGCALLDMYA-NCASIKDAIKTFEEMSERNVVTWNALLSAYAQ 520

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVC 319
            G  +  ++ F +MI+SG+ PD  +   +++ACS   L   G K  +  +    LA    
Sbjct: 521 NGDGKGTLKSFEEMIMSGYQPDSVSFLCILTACSHCRLVEEGLKYFNDMSGVYNLAPKRE 580

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG---YVQSGGRDKEAVKL 375
              ++VD   +    G  D++ K+  +M  + + + WT+++     +       K A +L
Sbjct: 581 HYTAMVDALCR---SGRFDEAEKLMGQMPFEPDEIVWTSVLNSCRIHKNYALARKAAGQL 637

Query: 376 FSDMIQGQVAPNHFTFASVLKACGN 400
           F+  +    AP + T +++    G 
Sbjct: 638 FNMKVLRDAAP-YVTMSNIFAEAGQ 661



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 76/277 (27%), Positives = 140/277 (50%), Gaps = 30/277 (10%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---------------------------- 366
           G +  +R++ D+M + N  S   II+GYV+SG                            
Sbjct: 57  GQLCQARQLLDQMPNRNSFSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYS 116

Query: 367 --GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
              R  +A KLF++M +    P++ T+ ++L  C +L  +    Q +   VK G  L+  
Sbjct: 117 KSNRFGDAFKLFAEMHRSGSQPDYVTYITLLTGCNDLEVAKELYQAHAQIVKLGHHLNHR 176

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V N+L+  Y ++G ++ AR+ F  +   + VS+N M+  YA N  +E+A EL  E+++ G
Sbjct: 177 VCNTLLDSYFKTGGLDSARRLFLEMCGWDSVSFNVMITGYANNGLNEEAIELFVEMQNLG 236

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
              S +TFA+++S +  +     G+QIH  ++K+ F  N  + NA +  YS+   V    
Sbjct: 237 FKPSDFTFAAVISASVGLDDTAFGQQIHGFVVKTSFIRNVFVGNAFLDFYSKHDCVNEVR 296

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           ++F EM + + +S+  +IT +A  G    ++++F ++
Sbjct: 297 KLFNEMPELDGVSYNVIITAYAWVGKVKESIDLFQEL 333



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 46/194 (23%), Positives = 83/194 (42%), Gaps = 46/194 (23%)

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYN--------------------------- 528
           L GASS   +     I ARI+K+GF+     +N                           
Sbjct: 17  LHGASSRQTLQTC--IDARIVKTGFDPITSRFNFMIKDLSERGQLCQARQLLDQMPNRNS 74

Query: 529 ----ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
                +IS Y +  N+  A ++F + ++R V++WT+MI  ++K      A ++F +M   
Sbjct: 75  FSIDIIISGYVKSGNLTVARRIFDDTDERTVVAWTTMIGAYSKSNRFGDAFKLFAEMHRS 134

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY----AC--MVDLLGR 638
           G +P+ +TYI +L+ C+   +  E       +Y  H  + ++ H+     C  ++D   +
Sbjct: 135 GSQPDYVTYITLLTGCNDLEVAKE-------LYQAHAQIVKLGHHLNHRVCNTLLDSYFK 187

Query: 639 SGSLTEALEFIRSM 652
           +G L  A      M
Sbjct: 188 TGGLDSARRLFLEM 201


>gi|297811443|ref|XP_002873605.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297319442|gb|EFH49864.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 750

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 261/713 (36%), Positives = 411/713 (57%), Gaps = 22/713 (3%)

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           S    GK  +A   F EM + G   + Y +  +  AC    +++ G +++   ++ G  +
Sbjct: 55  SLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHN-RMRMGIEN 113

Query: 214 SDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
             V +   ++ M+ + GS  LE A K+FD+M++ N V  T MI+   + G    A+ LF 
Sbjct: 114 PSVLLQNCVLQMYCECGS--LEDADKLFDEMSDLNAVSRTTMISAYAEQGLLDKAVGLFS 171

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M+ SG  P     + ++ +         G+Q+H+  IR GL  +  +   +V+MY KC 
Sbjct: 172 RMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSNASIETGIVNMYVKC- 230

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G +  +++VFD+M     ++WT ++ GY Q+G R ++A+KLF D+I   V  + F F+
Sbjct: 231 --GWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAG-RARDALKLFVDLITEGVEWDSFVFS 287

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
            VLKAC +L +    +Q++    K G   +  VG  L+  Y +    E A +AF+ + E 
Sbjct: 288 VVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSFESACRAFQEIREP 347

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIED-TGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           N VS++ ++  Y +    E+A +    +     V  +++T+ S+    S +     G Q+
Sbjct: 348 NDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQV 407

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA  IK     +    +ALI+MYS+C  ++ A +VF+ M++ ++++WT+ I+G A +G A
Sbjct: 408 HADAIKRSLIGSQYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNA 467

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
           + AL +F KM++ G+KPN +T+IAVL+ACSHAGL+ +G  +  +M  ++ +   ++HY C
Sbjct: 468 SEALRLFEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDC 527

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           M+D+  RSG L EAL F+++MP   D + W+ FL  C  H + ELGK A E + + DP+D
Sbjct: 528 MIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWTHKNLELGKIAGEELRQLDPED 587

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
            A ++L  NLY  AG WE  A + K M ER L KE  CSWI+   K+H+F VG+  HP++
Sbjct: 588 TAGYVLPFNLYTWAGKWEEAAEVMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQS 647

Query: 752 LEIYAELDQLALKIKEF-GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS- 809
            EIY        K+KEF G++    F     E  ++   L  HSE++A+AFGLIS + + 
Sbjct: 648 QEIYE-------KLKEFDGFMEGDMFQCSMTERREQ---LLDHSERLAIAFGLISVNGNA 697

Query: 810 -KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             PI+VFKNLR C DCH   K++S+VTG EIV+RDS RFHH K+GKCSCNDYW
Sbjct: 698 RAPIKVFKNLRACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 750



 Score =  253 bits (647), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 165/568 (29%), Positives = 298/568 (52%), Gaps = 18/568 (3%)

Query: 8   APAKIPPPSSFKPSN----PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAI 63
           +P+++P     K +N    PS  +L  S+S   I+     +  +  L+     G++ +A 
Sbjct: 11  SPSRVP---VIKTANFNQIPSWVSLKSSTSSVKISH-KQGQVENLHLVSLSKHGKLNEAF 66

Query: 64  FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLY 123
                M + G    L +Y  L ++C   R+   G+L+H+ +      P+ ++ N ++ +Y
Sbjct: 67  EFFQEMDKAGVSVSLYSYQCLFEACRELRSLSHGRLLHNRMRMGIENPSVLLQNCVLQMY 126

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            +CG L +A+K+F  M +  + VS ++MIS+Y  +G    A+ +F  MLE G  P    +
Sbjct: 127 CECGSLEDADKLFDEMSD-LNAVSRTTMISAYAEQGLLDKAVGLFSRMLESGDKPPSSMY 185

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           + ++++  N   + IG  I+  +++ G   S+  +   +++M+VK    L  A +VFD+M
Sbjct: 186 TTLLKSLVNPRALDIGRQIHAHVIRAG-LCSNASIETGIVNMYVKCGW-LVGAKRVFDQM 243

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
             K  V WT ++   TQ G  RDA++LF+D+I  G   D F  S V+ AC+ LE    GK
Sbjct: 244 AVKKPVAWTGLMVGYTQAGRARDALKLFVDLITEGVEWDSFVFSVVLKACASLEELRFGK 303

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+   + GL  +V VG  LVD Y KC+   S + + + F  + + N +SW+AII+GY 
Sbjct: 304 QIHACVAKLGLECEVSVGTPLVDFYIKCS---SFESACRAFQEIREPNDVSWSAIISGYC 360

Query: 364 QSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           Q   + +EAVK F  +  +  V  N FT+ S+ +AC  L D N+  QV+  A+KR     
Sbjct: 361 QM-SQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGS 419

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
               ++LI+MY++ G ++DA + FES+   ++V++   +  +A   N+ +A  L  ++  
Sbjct: 420 QYGESALITMYSKCGCLDDAHEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVS 479

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVE 541
            G+  ++ TF ++L+  S  G + +G+  +   + K         Y+ +I +Y+R   ++
Sbjct: 480 CGMKPNSVTFIAVLTACSHAGLVEQGKHYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLD 539

Query: 542 AAFQVFKEME-DRNVISWTSMITGFAKH 568
            A +  K M  + + +SW   ++G   H
Sbjct: 540 EALRFMKNMPFEPDAMSWKCFLSGCWTH 567



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 135/464 (29%), Positives = 245/464 (52%), Gaps = 24/464 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G + KA+     M + G+ P    Y+ LLKS +  R   +G+ +H+ + R+ L  N
Sbjct: 157 YAEQGLLDKAVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLCSN 216

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I   ++++Y KCG L  A ++F  M  K+  V+W+ ++  Y   G+  DA+ +FV+++
Sbjct: 217 ASIETGIVNMYVKCGWLVGAKRVFDQMAVKKP-VAWTGLMVGYTQAGRARDALKLFVDLI 275

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   + + FS V++AC++ E +  G  I+  + K G  + +V VG  L+D ++K S  
Sbjct: 276 TEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLG-LECEVSVGTPLVDFYIKCS-S 333

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVS 291
            ESA + F ++ E N V W+ +I+   Q+    +A++ F  +   +  + + FT + +  
Sbjct: 334 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQ 393

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L     G Q+H+ AI+  L        +L+ MY+KC   G +DD+ +VF+ M + +
Sbjct: 394 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC---GCLDDAHEVFESMDNPD 450

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV- 410
           +++WTA I+G+   G    EA++LF  M+   + PN  TF +VL AC +   + + EQ  
Sbjct: 451 IVAWTAFISGHAYYGNAS-EALRLFEKMVSCGMKPNSVTFIAVLTACSH---AGLVEQGK 506

Query: 411 -YTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--Y 464
            Y   + R   +   +   + +I +YARSG +++A +  +++ FE + +S+   +     
Sbjct: 507 HYLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALRFMKNMPFEPDAMSWKCFLSGCWT 566

Query: 465 AKNLNSEK-AFELLHEI--EDTG---VGTSAYTFASLLSGASSI 502
            KNL   K A E L ++  EDT    +  + YT+A     A+ +
Sbjct: 567 HKNLELGKIAGEELRQLDPEDTAGYVLPFNLYTWAGKWEEAAEV 610



 Score =  159 bits (403), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 105/436 (24%), Positives = 218/436 (50%), Gaps = 11/436 (2%)

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           K++ K      L +   ++ G   +A   F +M  +G     ++   +  AC EL   + 
Sbjct: 40  KISHKQGQVENLHLVSLSKHGKLNEAFEFFQEMDKAGVSVSLYSYQCLFEACRELRSLSH 99

Query: 302 GKQLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           G+ LH+  +R G+    V +   ++ MY +C   GS++D+ K+FD M D N +S T +I+
Sbjct: 100 GRLLHN-RMRMGIENPSVLLQNCVLQMYCEC---GSLEDADKLFDEMSDLNAVSRTTMIS 155

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            Y + G  DK AV LFS M++    P    + ++LK+  N    ++  Q++ H ++ G  
Sbjct: 156 AYAEQGLLDK-AVGLFSRMLESGDKPPSSMYTTLLKSLVNPRALDIGRQIHAHVIRAGLC 214

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +  +   +++MY + G +  A++ F+ +  K  V++  ++  Y +   +  A +L  ++
Sbjct: 215 SNASIETGIVNMYVKCGWLVGAKRVFDQMAVKKPVAWTGLMVGYTQAGRARDALKLFVDL 274

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              GV   ++ F+ +L   +S+  +  G+QIHA + K G E    +   L+  Y +C++ 
Sbjct: 275 ITEGVEWDSFVFSVVLKACASLEELRFGKQIHACVAKLGLECEVSVGTPLVDFYIKCSSF 334

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSA 599
           E+A + F+E+ + N +SW+++I+G+ +      A++ F  + + + +  N  TY ++  A
Sbjct: 335 ESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNAVVLNSFTYTSIFQA 394

Query: 600 CSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           CS     + G + H  ++  +  ++      + ++ +  + G L +A E   SM  + D+
Sbjct: 395 CSVLADCNIGGQVHADAI--KRSLIGSQYGESALITMYSKCGCLDDAHEVFESMD-NPDI 451

Query: 659 LVWRTFLGACRVHGDT 674
           + W  F+     +G+ 
Sbjct: 452 VAWTAFISGHAYYGNA 467


>gi|449501934|ref|XP_004161498.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Cucumis sativus]
          Length = 638

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 237/575 (41%), Positives = 365/575 (63%), Gaps = 6/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           +++ C        G+++H+  I+T     V +   L+ +Y KC   G   D+R +FD M 
Sbjct: 68  ILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLG---DARGMFDEMP 124

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             NV+SWTA+I+ Y Q G    EA+ LF +M++    PNHFTFA++L +C   L      
Sbjct: 125 QRNVVSWTAMISAYSQRG-FAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGR 183

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q+++ A+KR       VG+SL+ MYA+SGR+ DA   F  L E+++V+   ++  YA+  
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLPERDVVACTAIISGYAQMG 243

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A +L  +++  G+ +++ T+AS+L+  S + A+  G+Q+H+ +++SG  S   + N
Sbjct: 244 LDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLN 303

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IK 587
           +LI MYS+C NV  A ++F  M +R  ISW +M+ G++KHG A   LE+F  M  +  +K
Sbjct: 304 SLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMREENKVK 363

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYD-EHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           P+ ITY+AVLS CSH  L   G + F +M + + GI   + HY C+VDLLGR+G + EA 
Sbjct: 364 PDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEAF 423

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           +FI+ MP      +W + LG+CRVH D E+G    + +LE +P++   +++LSNLYASAG
Sbjct: 424 DFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLELEPENAGNYVILSNLYASAG 483

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE + NIR  M+E+ + KE G SW+E D  VH FH  + +HP+  E+  ++ +L++K K
Sbjct: 484 KWEDMRNIRDLMQEKAVTKEPGRSWVELDQIVHTFHASDHTHPRREEVANKVKELSIKFK 543

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+PD + VL++++EEQK + L  HSEK+A+AFGLI+T +   IRV KNLR+C DCH+
Sbjct: 544 EDGYVPDLSCVLYDVDEEQKEKVLLGHSEKLALAFGLIATPEGTTIRVIKNLRICVDCHS 603

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K++S +  R ++LRD NRFH+I  G CSC DYW
Sbjct: 604 FAKFVSRLYARTVILRDKNRFHNIVGGVCSCGDYW 638



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 226/418 (54%), Gaps = 15/418 (3%)

Query: 28  LPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           L P S   F  Q + S   S  L    + G++++A+  + ++   G     + Y  +L  
Sbjct: 17  LSPVSRYTFSRQISFSP--SPNLKTLCSSGQLKEALLQMAIL---GREVKFEGYDSILNE 71

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C+  R    G+ VH+ + ++   P+  +   LI LY+KC  L +A  +F  M  +R++VS
Sbjct: 72  CVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEM-PQRNVVS 130

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W++MIS+Y  RG   +A+++FVEML     PN + F+ ++ +C  +     G  I+   +
Sbjct: 131 WTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETGRQIHSIAI 190

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           K  Y +S + VG +L+DM+ K S  +  A+ VF  + E++ V  T +I+   Q+G   +A
Sbjct: 191 KRNY-ESHMFVGSSLLDMYAK-SGRICDAHGVFHCLPERDVVACTAIISGYAQMGLDEEA 248

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           ++LF  + + G   +  T + V++A S L     GKQ+HS  +R+G    V +  SL+DM
Sbjct: 249 LKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSYVVLLNSLIDM 308

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAP 386
           Y+KC   G+V  +R++FD M +   +SW A++ GY +  G  +E ++LF  M  + +V P
Sbjct: 309 YSKC---GNVCYARRIFDSMPERTCISWNAMLVGYSKH-GMAREVLELFKLMREENKVKP 364

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
           +  T+ +VL  C +    ++  +++ + V     ++  +G+   ++ +  R+GR+E+A
Sbjct: 365 DSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGRVEEA 422



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 230/441 (52%), Gaps = 17/441 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           + +++  C +   +  G  ++  ++K  Y  S V +   LI ++ K    L  A  +FD+
Sbjct: 65  YDSILNECVSQRAIREGQRVHTHMIKTCYLPS-VYLRTRLIVLYNKCDC-LGDARGMFDE 122

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M ++N V WT MI+  +Q G   +A+ LF++M+ S   P+ FT + ++++C     F +G
Sbjct: 123 MPQRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSCYGSLGFETG 182

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+HS AI+      + VG SL+DMYAK    G + D+  VF  + + +V++ TAII+GY
Sbjct: 183 RQIHSIAIKRNYESHMFVGSSLLDMYAK---SGRICDAHGVFHCLPERDVVACTAIISGY 239

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q  G D+EA+KLF  +    +  N  T+ASVL A   L   N  +QV++H ++ G+   
Sbjct: 240 AQM-GLDEEALKLFRQLQIEGMNSNSVTYASVLTALSGLAALNHGKQVHSHVLRSGQYSY 298

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-E 481
             + NSLI MY++ G +  AR+ F+S+ E+  +S+N M+  Y+K+  + +  EL   + E
Sbjct: 299 VVLLNSLIDMYSKCGNVCYARRIFDSMPERTCISWNAMLVGYSKHGMAREVLELFKLMRE 358

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII--KSGFESNHCIYNALISMYSRCAN 539
           +  V   + T+ ++LSG S       G +I   ++  K G E +   Y  ++ +  R   
Sbjct: 359 ENKVKPDSITYLAVLSGCSHGQLEDMGLEIFYNMVNGKDGIEPDIGHYGCVVDLLGRAGR 418

Query: 540 VEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKP-NGITYIAVL 597
           VE AF   K+M      + W S++     H      + +  K+L   ++P N   Y+ + 
Sbjct: 419 VEEAFDFIKKMPFVPTAAIWGSLLGSCRVHSDVEIGIIVGQKLLE--LEPENAGNYVILS 476

Query: 598 SACSHAGLISEGWKHFRSMYD 618
           +  + AG     W+  R++ D
Sbjct: 477 NLYASAG----KWEDMRNIRD 493



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 47/162 (29%), Positives = 89/162 (54%), Gaps = 1/162 (0%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           + S+L+   S  AI +G+++H  +IK+ +  +  +   LI +Y++C  +  A  +F EM 
Sbjct: 65  YDSILNECVSQRAIREGQRVHTHMIKTCYLPSVYLRTRLIVLYNKCDCLGDARGMFDEMP 124

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            RNV+SWT+MI+ +++ GFA  AL +F +ML    +PN  T+  +L++C +  L  E  +
Sbjct: 125 QRNVVSWTAMISAYSQRGFAFEALNLFVEMLRSDTEPNHFTFATILTSC-YGSLGFETGR 183

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
              S+  +      M   + ++D+  +SG + +A      +P
Sbjct: 184 QIHSIAIKRNYESHMFVGSSLLDMYAKSGRICDAHGVFHCLP 225


>gi|225454494|ref|XP_002276948.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Vitis vinifera]
          Length = 913

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 271/830 (32%), Positives = 437/830 (52%), Gaps = 83/830 (10%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           KG   D + YS+ LK+C R  +  LG  +H  L +   + +  +  +L++ Y +C  L +
Sbjct: 127 KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 186

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC-FSAVIRAC 190
           AN++F  M N   ++ W+  I   +   K    + +F +M +  F   E      V++AC
Sbjct: 187 ANQVFHEMPNPEALL-WNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQAC 244

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
                +     I+G++ + G  DSDV +   LI M+ K    LE A +VFD M  +NT  
Sbjct: 245 GKMGALNAAKQIHGYVFRFG-LDSDVSLCNPLISMYSKNG-KLELARRVFDSMENRNTSS 302

Query: 251 WTLMITRCTQLGCPRDAIRLFLDM--------------ILSG------------------ 278
           W  MI+    LG   DA  LF ++              +LSG                  
Sbjct: 303 WNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQ 362

Query: 279 ---FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
              F P+  +++ V+ A SEL     GK+ H + +R G   DV VG SL+DMY K   + 
Sbjct: 363 GEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK---NH 419

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
           S+  ++ VFD M + N+ +W ++++GY    G  ++A++L + M +  + P+  T+    
Sbjct: 420 SLTSAQAVFDNMKNRNIFAWNSLVSGY-SFKGMFEDALRLLNQMEKEGIKPDLVTW---- 474

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL----FE 451
                                          N +IS YA  G  ++A             
Sbjct: 475 -------------------------------NGMISGYAMWGCGKEALAVLHQTKSLGLT 503

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            N+VS+  ++   ++  N+  + +   +++  GV  ++ +   LL   +S+  + KG++I
Sbjct: 504 PNVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRACASLSLLQKGKEI 563

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   I++GF  +  +  ALI MYS+ ++++ A +VF+ ++++ + SW  MI GFA  G  
Sbjct: 564 HCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLG 623

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A+ +F +M   G+ P+ IT+ A+LSAC ++GLI EGWK+F SM  ++ IV R+EHY C
Sbjct: 624 KEAISVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCC 683

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           MVDLLGR+G L EA + I +MPL  D  +W   LG+CR+H + +  + AA+ + + +P +
Sbjct: 684 MVDLLGRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLKFAETAAKNLFKLEPNN 743

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
            A +IL+ NLY+    WE + ++R+ M    +      SWI+ + +VH F   E  HP  
Sbjct: 744 SANYILMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDA 803

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
            +IY EL QL  ++K+ GY+PD N V   ++E +K + L  H+EK+A+ +GLI     +P
Sbjct: 804 GKIYFELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEP 863

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IRV KN R+C DCH+A KYIS+V  RE+ LRD  RFHH ++GKCSCND+W
Sbjct: 864 IRVIKNTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 913



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 145/626 (23%), Positives = 270/626 (43%), Gaps = 80/626 (12%)

Query: 98  KLVHSLLTR--SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           K++H+ + +   K  P++   N LIS Y   GD   A  +F  +G  R+ + W+S +  +
Sbjct: 50  KMMHAQMIKLPQKWNPDAAAKN-LISSYLGFGDFWSAAMVF-YVGLPRNYLKWNSFVEEF 107

Query: 156 VNRGKQVD-AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            +    +   + +F E+   G   +   +S  ++ C+   ++ +G  I+G L+K G FD 
Sbjct: 108 KSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRG-FDL 166

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV + CAL++ + +    LE A +VF +M     + W   I    Q    +  + LF  M
Sbjct: 167 DVYLRCALMNFYGR-CWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM 225

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             S    +  T+  V+ AC ++    + KQ+H +  R GL  DV +   L+ MY+K   +
Sbjct: 226 QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSK---N 282

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---------------------------- 366
           G ++ +R+VFD M + N  SW ++I+ Y   G                            
Sbjct: 283 GKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 342

Query: 367 ------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
                 G  +E + +   M      PN  +  SVL+A   L   N+ ++ + + ++ G  
Sbjct: 343 SGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFD 402

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            D  VG SLI MY ++  +  A+  F+++  +N+ ++N++V  Y+     E A  LL+++
Sbjct: 403 CDVYVGTSLIDMYVKNHSLTSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQM 462

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           E  G+     T+  ++SG +  G   +   +  +    G   N   + ALIS  S+  N 
Sbjct: 463 EKEGIKPDLVTWNGMISGYAMWGCGKEALAVLHQTKSLGLTPNVVSWTALISGSSQAGNN 522

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             + + F +M+                                +G+ PN  +   +L AC
Sbjct: 523 RDSLKFFAQMQQ-------------------------------EGVMPNSASITCLLRAC 551

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           +   L+ +G K    +   +G ++ +     ++D+  +S SL  A +  R +  +  +  
Sbjct: 552 ASLSLLQKG-KEIHCLSIRNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQ-NKTLAS 609

Query: 661 WRTFLGACRVHGDTELGKHAAEMILE 686
           W   +    + G   LGK A  +  E
Sbjct: 610 WNCMIMGFAIFG---LGKEAISVFNE 632



 Score =  143 bits (360), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 95/348 (27%), Positives = 171/348 (49%), Gaps = 38/348 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  ++ +  L  M  +G  P+  + + +L++       ++GK  H  + R+  + +
Sbjct: 345 HFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCD 404

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  SLI +Y K   L  A  +F +M N R+I +W+S++S Y  +G   DA+ +  +M 
Sbjct: 405 VYVGTSLIDMYVKNHSLTSAQAVFDNMKN-RNIFAWNSLVSGYSFKGMFEDALRLLNQME 463

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           + G  P+   ++ +I           G+ ++G            C   AL  +    S+ 
Sbjct: 464 KEGIKPDLVTWNGMIS----------GYAMWG------------CGKEALAVLHQTKSLG 501

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L             N V WT +I+  +Q G  RD+++ F  M   G +P+  +++ ++ A
Sbjct: 502 LTP-----------NVVSWTALISGSSQAGNNRDSLKFFAQMQQEGVMPNSASITCLLRA 550

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ L L   GK++H  +IR G   DV V  +L+DMY+K +   S+ ++ KVF R+ +  +
Sbjct: 551 CASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSS---SLKNAHKVFRRIQNKTL 607

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            SW  +I G+    G  KEA+ +F++M +  V P+  TF ++L AC N
Sbjct: 608 ASWNCMIMGFAIF-GLGKEAISVFNEMQKVGVGPDAITFTALLSACKN 654



 Score = 73.6 bits (179), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 53/200 (26%), Positives = 93/200 (46%), Gaps = 21/200 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M Q+G  P+  + + LL++C        GK +H L  R+    +  +  +LI +YSK   
Sbjct: 532 MQQEGVMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDMYSKSSS 591

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A+K+F+ + NK  + SW+ MI  +   G   +AI +F EM ++G  P+   F+A++ 
Sbjct: 592 LKNAHKVFRRIQNK-TLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITFTALLS 650

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCV---------GCALIDMFVKGSVDLESAYKV 239
           AC N+  +  G           YFDS +            C ++D+  +    L+ A+ +
Sbjct: 651 ACKNSGLIGEG---------WKYFDSMITDYRIVPRLEHYCCMVDLLGRAGY-LDEAWDL 700

Query: 240 FDKMTEK-NTVGWTLMITRC 258
              M  K +   W  ++  C
Sbjct: 701 IHTMPLKPDATIWGALLGSC 720


>gi|15232500|ref|NP_188131.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546753|sp|P0C898.1|PP232_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g15130
 gi|332642102|gb|AEE75623.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 689

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 259/687 (37%), Positives = 406/687 (59%), Gaps = 18/687 (2%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +++R C+       G  ++ +LLK G    ++     LIDM+ K    L  AYKVFD M 
Sbjct: 11  SILRVCTRKGLSDQGGQVHCYLLKSGS-GLNLITSNYLIDMYCKCREPL-MAYKVFDSMP 68

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           E+N V W+ +++     G  + ++ LF +M   G  P+ FT S  + AC  L     G Q
Sbjct: 69  ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H + ++ G  + V VG SLVDMY+KC   G ++++ KVF R++D +++SW A+I G+V 
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKC---GRINEAEKVFRRIVDRSLISWNAMIAGFVH 185

Query: 365 SGGRDKEAVKLFSDMIQGQVA--PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           +G   K A+  F  M +  +   P+ FT  S+LKAC +       +Q++   V+ G    
Sbjct: 186 AGYGSK-ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244

Query: 423 D--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
               +  SL+ +Y + G +  ARKAF+ + EK ++S+++++  YA+     +A  L   +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCA 538
           ++      ++  +S++   +    + +G+Q+ A  +K  SG E++  + N+++ MY +C 
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCG 362

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            V+ A + F EM+ ++VISWT +ITG+ KHG   +++ IFY+ML   I+P+ + Y+AVLS
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSH+G+I EG + F  + + HGI  R+EHYAC+VDLLGR+G L EA   I +MP+  +V
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
            +W+T L  CRVHGD ELGK   +++L  D ++PA ++++SNLY  AG+W    N R+  
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK-EFGYLPDTNFV 777
             + L KEAG SW+E + +VH F  GE SHP T  I   L +   +++ E GY+      
Sbjct: 543 NIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHE 602

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLIS---TSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           LH++++E K + L  HSEK+A+   L +     K K IRVFKNLRVC DCH  IK +S +
Sbjct: 603 LHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKI 662

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
           T    V+RD+ RFH  +DG CSC DYW
Sbjct: 663 TKIAYVVRDAVRFHSFEDGCCSCGDYW 689



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 142/493 (28%), Positives = 254/493 (51%), Gaps = 15/493 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L+ C R      G  VH  L +S    N +  N LI +Y KC +   A K+F SM  +R
Sbjct: 12  ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM-PER 70

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           ++VSWS+++S +V  G    ++ +F EM   G  PNE+ FS  ++AC     +  G  I+
Sbjct: 71  NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           GF LK G F+  V VG +L+DM+ K G ++   A KVF ++ +++ + W  MI      G
Sbjct: 131 GFCLKIG-FEMMVEVGNSLVDMYSKCGRIN--EAEKVFRRIVDRSLISWNAMIAGFVHAG 187

Query: 263 CPRDAIRLFLDMILSGF--LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL--DV 318
               A+  F  M  +     PD FTL+ ++ ACS   +  +GKQ+H + +R+G       
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +  SLVD+Y KC   G +  +RK FD++ +  ++SW+++I GY Q  G   EA+ LF  
Sbjct: 248 TITGSLVDLYVKC---GYLFSARKAFDQIKEKTMISWSSLILGYAQE-GEFVEAMGLFKR 303

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           + +     + F  +S++    +       +Q+   AVK    L+  V NS++ MY + G 
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +++A K F  +  K+++S+  ++  Y K+   +K+  + +E+    +      + ++LS 
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVI 556
            S  G I +GE++ ++++++ G +     Y  ++ +  R   ++ A  +   M  + NV 
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483

Query: 557 SWTSMITGFAKHG 569
            W ++++    HG
Sbjct: 484 IWQTLLSLCRVHG 496



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 219/405 (54%), Gaps = 18/405 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+ +G ++ ++     M ++G +P+  T+S  LK+C        G  +H    +   E  
Sbjct: 82  HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSL+ +YSKCG +NEA K+F+ + + R ++SW++MI+ +V+ G    A+  F  M 
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200

Query: 173 ELGFC--PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-DSDVCVGCALIDMFVKG 229
           E      P+E+  +++++ACS+T  +  G  I+GFL++ G+   S   +  +L+D++VK 
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              L SA K FD++ EK  + W+ +I    Q G   +A+ LF  +       D F LS +
Sbjct: 261 GY-LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSI 319

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +   ++  L   GKQ+ + A++    L+  V  S+VDMY KC   G VD++ K F  M  
Sbjct: 320 IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC---GLVDEAEKCFAEMQL 376

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT +ITGY +  G  K++V++F +M++  + P+   + +VL AC +       E+
Sbjct: 377 KDVISWTVVITGYGKH-GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 435

Query: 410 VY-----THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           ++     TH +K       CV    + +  R+GR+++A+   +++
Sbjct: 436 LFSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEAKHLIDTM 476



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 213/409 (52%), Gaps = 13/409 (3%)

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
            R  L  ++  C+   L   G Q+H + +++G  L++     L+DMY KC        + 
Sbjct: 5   QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCR---EPLMAY 61

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           KVFD M + NV+SW+A+++G+V +G   K ++ LFS+M +  + PN FTF++ LKACG L
Sbjct: 62  KVFDSMPERNVVSWSALMSGHVLNGDL-KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
                  Q++   +K G  +   VGNSL+ MY++ GR+ +A K F  + +++L+S+N M+
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGT--SAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
             +       KA +    +++  +      +T  SLL   SS G I  G+QIH  +++SG
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240

Query: 520 FE--SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           F   S+  I  +L+ +Y +C  + +A + F +++++ +ISW+S+I G+A+ G    A+ +
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F ++     + +     +++   +   L+ +G K  +++  +            +VD+  
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYL 359

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           + G + EA +    M L  DV+ W   +     HG   LGK +  +  E
Sbjct: 360 KCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYE 404


>gi|356511263|ref|XP_003524346.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 763

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 268/755 (35%), Positives = 433/755 (57%), Gaps = 37/755 (4%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +P+ V  N  IS + + G  + A ++F SM  +R  VS+++MIS Y+   K   A  +F 
Sbjct: 43  DPDIVTWNKAISSHMRNGHCDSALRVFNSM-PRRSSVSYNAMISGYLRNAKFSLARDLFD 101

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIG--HIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           +M      P    FS  +       N  +G  H ++  + K      DV    A++  + 
Sbjct: 102 KM------PERDLFSWNVMLTGYVRNRRLGEAHKLFDLMPK-----KDVVSWNAMLSGYA 150

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           +    ++ A +VF+KM  +N++ W  ++      G  ++A RLF        +     + 
Sbjct: 151 QNGF-VDEAREVFNKMPHRNSISWNGLLAAYVHNGRLKEARRLFESQSNWELISWNCLMG 209

Query: 288 GVVSACSELELFTSGKQLHS-WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           G V    +  +    +QL     +R     DV    +++  YA+    G +  ++++F+ 
Sbjct: 210 GYV----KRNMLGDARQLFDRMPVR-----DVISWNTMISGYAQV---GDLSQAKRLFNE 257

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
               +V +WTA+++GYVQ+G  D EA K F +M       N  ++ ++L          +
Sbjct: 258 SPIRDVFTWTAMVSGYVQNGMVD-EARKYFDEM----PVKNEISYNAMLAGYVQYKKMVI 312

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           A +++     R    +    N++I+ Y ++G +  ARK F+ + +++ VS+  ++  YA+
Sbjct: 313 AGELFEAMPCR----NISSWNTMITGYGQNGGIAQARKLFDMMPQRDCVSWAAIISGYAQ 368

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N + E+A  +  E++  G  ++  TF+  LS  + I A+  G+Q+H +++K+GFE+   +
Sbjct: 369 NGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETGCFV 428

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            NAL+ MY +C + + A  VF+ +E+++V+SW +MI G+A+HGF  +AL +F  M   G+
Sbjct: 429 GNALLGMYFKCGSTDEANDVFEGIEEKDVVSWNTMIAGYARHGFGRQALVLFESMKKAGV 488

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+ IT + VLSACSH+GLI  G ++F SM  ++ +    +HY CM+DLLGR+G L EA 
Sbjct: 489 KPDEITMVGVLSACSHSGLIDRGTEYFYSMDRDYNVKPTSKHYTCMIDLLGRAGRLEEAE 548

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
             +R+MP       W   LGA R+HG+TELG+ AAEM+ + +PQ+   ++LLSNLYA++G
Sbjct: 549 NLMRNMPFDPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 608

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W  V  +R +M+E  + K  G SW+E  NK+H F VG+  HP+   IYA L++L LK++
Sbjct: 609 RWVDVGKMRSKMREAGVQKVTGYSWVEVQNKIHTFSVGDCFHPEKDRIYAFLEELDLKMR 668

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             GY+  T  VLH++EEE+K   L  HSEK+AVAFG+++    +PIRV KNLRVC DCH 
Sbjct: 669 REGYVSSTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPAGRPIRVMKNLRVCQDCHN 728

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK+IS + GR I+LRDS+RFHH  +G CSC DYW
Sbjct: 729 AIKHISKIVGRLIILRDSHRFHHFSEGICSCGDYW 763



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 42/141 (29%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  ++A+     M + G   +  T+S  L +C       LGK VH  + ++  E  
Sbjct: 366 YAQNGHYEEALNMFVEMKRDGESSNRSTFSCALSTCADIAALELGKQVHGQVVKAGFETG 425

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+L+ +Y KCG  +EAN +F+ +  ++D+VSW++MI+ Y   G    A+ +F  M 
Sbjct: 426 CFVGNALLGMYFKCGSTDEANDVFEGI-EEKDVVSWNTMIAGYARHGFGRQALVLFESMK 484

Query: 173 ELGFCPNEYCFSAVIRACSNT 193
           + G  P+E     V+ ACS++
Sbjct: 485 KAGVKPDEITMVGVLSACSHS 505


>gi|357147965|ref|XP_003574566.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Brachypodium distachyon]
          Length = 923

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/811 (32%), Positives = 465/811 (57%), Gaps = 13/811 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G +++A+     M ++    + + ++ ++  C    +   G  V S +  S L+    
Sbjct: 122 SNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVS 181

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSLIS+    G +++A K+F  M  +RD VSW++++S Y + G    +  +F +M   
Sbjct: 182 VANSLISMLGNLGRVHDAEKLFYRM-EERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRG 240

Query: 175 GFCPNE-YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           G   ++     ++I  C++++ V+ G  ++   L+ G   S + V  AL++M+      L
Sbjct: 241 GLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTG-LHSYIPVVNALVNMYSSAG-KL 298

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A  +F  M+ ++ + W  MI+   Q G   DA++    ++ +   PDR T S  + AC
Sbjct: 299 ADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGAC 358

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S       G+ +H+  ++  L  ++ VG SL+ MY KC    S++D+ ++F  M +H+V+
Sbjct: 359 SSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCN---SIEDAERIFQLMPNHDVV 415

Query: 354 SWTAIITGY--VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD-SNVAEQV 410
           S   +I  Y  ++ G    +A+++F  M +G+V  N+ T  ++L +  +  D  N    +
Sbjct: 416 SCNILIGSYAVLEDG---TKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPL 472

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + + +  G   DD V NSLI+MYA+ G +E +   F+ +  +++VS+N M+ A  ++ + 
Sbjct: 473 HAYTIHAGFLSDDYVSNSLITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHG 532

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E++ +L  ++   G G      A  +S ++S+ ++ +G Q+H   +K G  ++  + NA 
Sbjct: 533 EESLKLFMDMRHDGNGLDHICLAECMSSSASLASLEEGMQLHGLGLKCGLGNDSHVVNAA 592

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MY +C  ++   ++  +   R    W ++I+G+A++G+   A E F  M++ G  P+ 
Sbjct: 593 MDMYGKCGKMDEMLKMLPDPAIRPQQCWNTLISGYARYGYFKEAEETFKHMISVGRTPDY 652

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T++ +LSACSHAGL+ +G  ++ SM    G+   ++H  C+VD+LGR G   EA +FI 
Sbjct: 653 VTFVTLLSACSHAGLVDKGIDYYNSMSSVFGVSPGIKHCVCIVDILGRLGRFAEAEKFIE 712

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
            MP+  + L+WR+ L + R H + ++G+ AA+ +LE DP D +A++LLSNLYA++  W  
Sbjct: 713 DMPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKRLLELDPFDDSAYVLLSNLYATSARWSD 772

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V  +R  MK  NL K   CSW++   +V  F +G+ SH    +IY +LD++ LK++E GY
Sbjct: 773 VDRVRSHMKTINLNKIPACSWLKQKKEVSTFGIGDHSHKHADKIYMKLDEILLKLREVGY 832

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           + DT+  LH+ +EEQK Q L+ HSEK+A+A+GLI+  +   +R+FKNLRVC DCH   K 
Sbjct: 833 VADTSSALHDTDEEQKEQNLWNHSEKLALAYGLITVPEGCTVRIFKNLRVCADCHLVFKL 892

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +SMV  REIVLRD  RFHH K G CSC+D+W
Sbjct: 893 VSMVFDREIVLRDPYRFHHFKGGSCSCSDFW 923



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 152/547 (27%), Positives = 278/547 (50%), Gaps = 21/547 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEPNSVI 115
           GR   A   L  M ++G        + L+ +C R       G  +H+L  ++ L  N  I
Sbjct: 22  GRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHALTQKAGLMVNVYI 81

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +L+ LY     + +A ++F  M  +R++VSW++++ +  + G   +A+  +  M    
Sbjct: 82  GTALLHLYGSQKHVLDAQRLFWEM-PERNVVSWTALMVALSSNGHLEEALGYYRRMRRER 140

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD-LE 234
              N   F+ V+  C + E+   G  ++  ++  G     V V  +LI M   G++  + 
Sbjct: 141 IACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSG-LQRQVSVANSLISML--GNLGRVH 197

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSAC 293
            A K+F +M E++TV W  +++  +  G    + R+F DM   G L  D  TL  ++S C
Sbjct: 198 DAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDATTLCSLISVC 257

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +  +  + G  +HS  +RTGL   + V  +LV+MY+     G + D+  +F  M   +++
Sbjct: 258 ASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSA---GKLADAEFLFWNMSRRDLI 314

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQV 410
           SW  +I+ YVQ+ G + +A+K    ++     P+  TF+S L AC   G L+D      V
Sbjct: 315 SWNTMISSYVQN-GNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMD---GRMV 370

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   ++     +  VGNSLI+MY +   +EDA + F+ +   ++VS N ++ +YA   + 
Sbjct: 371 HAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSCNILIGSYAVLEDG 430

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI-GKGEQIHARIIKSGFESNHCIYNA 529
            KA ++   +    V  +  T  ++L   +S   +   G  +HA  I +GF S+  + N+
Sbjct: 431 TKAMQVFFWMRRGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDYVSNS 490

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI+MY++C ++E++  VF+ + +R+V+SW +MI    +HG    +L++F  M  DG   N
Sbjct: 491 LITMYAKCGDLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDG---N 547

Query: 590 GITYIAV 596
           G+ +I +
Sbjct: 548 GLDHICL 554



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 233/461 (50%), Gaps = 8/461 (1%)

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN-TENVAIG 199
           + R   SW + IS  V  G+   A  M   M E G   + +  ++++ AC    E  A G
Sbjct: 4   DHRTPSSWYTAISGCVRCGRDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACG 63

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+    K G    +V +G AL+ ++      L+ A ++F +M E+N V WT ++   +
Sbjct: 64  AAIHALTQKAGLM-VNVYIGTALLHLYGSQKHVLD-AQRLFWEMPERNVVSWTALMVALS 121

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             G   +A+  +  M       +    + VVS C  LE   +G Q+ S  I +GL   V 
Sbjct: 122 SNGHLEEALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVS 181

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  SL+ M       G V D+ K+F RM + + +SW A+++ Y   G   K + ++FSDM
Sbjct: 182 VANSLISMLGNL---GRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSK-SFRVFSDM 237

Query: 380 IQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
            +G +   +  T  S++  C +    +    V++  ++ G      V N+L++MY+ +G+
Sbjct: 238 RRGGLLRHDATTLCSLISVCASSDYVSYGSGVHSLCLRTGLHSYIPVVNALVNMYSSAGK 297

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           + DA   F ++  ++L+S+NTM+ +Y +N N+  A + L ++  T  G    TF+S L  
Sbjct: 298 LADAEFLFWNMSRRDLISWNTMISSYVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGA 357

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            SS GA+  G  +HA  ++     N  + N+LI+MY +C ++E A ++F+ M + +V+S 
Sbjct: 358 CSSPGALMDGRMVHAMTLQLSLHHNLLVGNSLITMYGKCNSIEDAERIFQLMPNHDVVSC 417

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
             +I  +A      +A+++F+ M    +K N IT + +L +
Sbjct: 418 NILIGSYAVLEDGTKAMQVFFWMRRGEVKLNYITIVNILGS 458



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 188/401 (46%), Gaps = 13/401 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G    A+ TL  +      PD  T+S  L +C        G++VH++  +  L  N
Sbjct: 323 YVQNGNNMDALKTLGQLLHTNEGPDRMTFSSALGACSSPGALMDGRMVHAMTLQLSLHHN 382

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ NSLI++Y KC  + +A +IF+ M N  D+VS + +I SY        A+ +F  M 
Sbjct: 383 LLVGNSLITMYGKCNSIEDAERIFQLMPN-HDVVSCNILIGSYAVLEDGTKAMQVFFWMR 441

Query: 173 ELGFCPNEYCFSAVIRACSNTENVA-IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
                 N      ++ + +++ ++   G  ++ + +  G+   D  V  +LI M+ K   
Sbjct: 442 RGEVKLNYITIVNILGSFTSSNDLRNYGLPLHAYTIHAGFLSDDY-VSNSLITMYAKCG- 499

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DLES+  VF ++  ++ V W  MI    Q G   ++++LF+DM   G   D   L+  +S
Sbjct: 500 DLESSNNVFQRIINRSVVSWNAMIAANVQHGHGEESLKLFMDMRHDGNGLDHICLAECMS 559

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           + + L     G QLH   ++ GL  D  V  + +DMY KC   G +D+  K+        
Sbjct: 560 SSASLASLEEGMQLHGLGLKCGLGNDSHVVNAAMDMYGKC---GKMDEMLKMLPDPAIRP 616

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQ 409
              W  +I+GY +  G  KEA + F  MI     P++ TF ++L AC    L+D  +   
Sbjct: 617 QQCWNTLISGYARY-GYFKEAEETFKHMISVGRTPDYVTFVTLLSACSHAGLVDKGIDYY 675

Query: 410 VYTHAV-KRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
               +V      +  CV   ++ +  R GR  +A K  E +
Sbjct: 676 NSMSSVFGVSPGIKHCV--CIVDILGRLGRFAEAEKFIEDM 714



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/323 (23%), Positives = 156/323 (48%), Gaps = 5/323 (1%)

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV-AEQVYT 412
           SW   I+G V+ G RD  A  +   M +  V  + F  AS++ AC    +       ++ 
Sbjct: 10  SWYTAISGCVRCG-RDSTAFSMLRGMRERGVPLSGFALASLVTACERWEEGRACGAAIHA 68

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
              K G  ++  +G +L+ +Y     + DA++ F  + E+N+VS+  ++ A + N + E+
Sbjct: 69  LTQKAGLMVNVYIGTALLHLYGSQKHVLDAQRLFWEMPERNVVSWTALMVALSSNGHLEE 128

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A      +    +  +A  FA+++S   S+     G Q+ + +I SG +    + N+LIS
Sbjct: 129 ALGYYRRMRRERIACNANAFATVVSLCGSLEDEVAGLQVFSHVIVSGLQRQVSVANSLIS 188

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGI 591
           M      V  A ++F  ME+R+ +SW ++++ ++  G  +++  +F  M   G ++ +  
Sbjct: 189 MLGNLGRVHDAEKLFYRMEERDTVSWNALVSMYSHEGLCSKSFRVFSDMRRGGLLRHDAT 248

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T  +++S C+ +  +S G     S+    G+   +     +V++   +G L +A EF+  
Sbjct: 249 TLCSLISVCASSDYVSYG-SGVHSLCLRTGLHSYIPVVNALVNMYSSAGKLADA-EFLFW 306

Query: 652 MPLSADVLVWRTFLGACRVHGDT 674
                D++ W T + +   +G+ 
Sbjct: 307 NMSRRDLISWNTMISSYVQNGNN 329


>gi|449453226|ref|XP_004144359.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  483 bits (1244), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/749 (36%), Positives = 430/749 (57%), Gaps = 69/749 (9%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI+ YS+ G + +A  +F  M +K +I+SW+S+++ Y    +  +A +MF +M E   
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDK-NIISWNSIVAGYFQNKRPQEAQNMFDKMSE--- 157

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             N   ++ ++    N   +     ++  +      + +V    A++  +VK  + +  A
Sbjct: 158 -RNTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGM-ISEA 210

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +F +M EKN V WT+M+    Q G   +A RLF DM     +P++             
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLF-DM-----MPEK------------- 251

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                               DV    +++  Y  C V G + ++R +FD M   NV+SWT
Sbjct: 252 --------------------DVVTRTNMIGGY--CQV-GRLVEARMLFDEMPRRNVVSWT 288

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA---CGNLLDSNVAEQVYTH 413
            +ITGYVQ+   D  A KLF  M +     N  ++ ++LK    CG L     +E     
Sbjct: 289 TMITGYVQNQQVDI-ARKLFEVMPE----KNEVSWTAMLKGYTNCGRL--DEASELFNAM 341

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K   ++  C  N++I  + ++G +  AR+ F+ + EK+  +++ M+  Y +      A
Sbjct: 342 PIK---SVVAC--NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDA 396

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            EL   ++  G+  +  +  S+LS  + +  +  G +IHA++++S F+ +  + + L+SM
Sbjct: 397 LELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSM 456

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y +C N+  A QVF     ++V+ W S+ITG+A+HG    AL +F+ M   GI P+ +T+
Sbjct: 457 YIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTF 516

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           + VLSACS+ G + +G + F SM  ++ + Q++EHYACMVDLLGR+G L EA++ I  MP
Sbjct: 517 VGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMP 576

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           + AD ++W   LGACR H   +L + AA+ +L  +P++    ILLSN+YAS G W+ VA 
Sbjct: 577 MEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAE 636

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS-HPKTLEIYAELDQLALKIKEFGYLP 772
           +R+ M++R + K  GCSWI  + KVHKF  G++S HP+  EI   L+ L+  ++E GY P
Sbjct: 637 LRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYP 696

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D +FVLH+++EE+KVQ L  HSEK+AVA+GL+      PIRV KNLRVCGDCH AIK I+
Sbjct: 697 DQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIA 756

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            VTGREI+LRD+NRFHH KDG CSC DYW
Sbjct: 757 KVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 236/518 (45%), Gaps = 53/518 (10%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI-LNSLISLYSKCGDLNEANKIFKSMGN 141
           ++ ++ + +R   LG++  + +   ++   ++I  NS+++ Y +     EA  +F  M +
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM-S 156

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA------CSNTE- 194
           +R+ +SW+ ++S Y+N G   +A  +F  M E     N   ++A++R        S  E 
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPE----RNVVSWTAMVRGYVKEGMISEAET 212

Query: 195 --------NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV--------------D 232
                   NV    ++ G LL+ G  D      C L DM  +  V               
Sbjct: 213 LFWQMPEKNVVSWTVMLGGLLQEGRIDE----ACRLFDMMPEKDVVTRTNMIGGYCQVGR 268

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  +FD+M  +N V WT MIT   Q      A +LF  M     +     L G  + 
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTN- 327

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C  L+   + +  ++  I++ +A +  + C           +G V  +R+VFD+M + + 
Sbjct: 328 CGRLD--EASELFNAMPIKSVVACNAMILC--------FGQNGEVPKARQVFDQMREKDE 377

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +W+A+I  Y +  G + +A++LF  M +  + PN  +  SVL  C  L + +   +++ 
Sbjct: 378 GTWSAMIKVY-ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHA 436

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             V+    LD  V + L+SMY + G +  A++ F+    K++V +N+++  YA++    +
Sbjct: 437 QLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE 496

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALI 531
           A  + H++  +G+     TF  +LS  S  G + KG +I   +  K   E     Y  ++
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            +  R   +  A  + ++M  + + I W +++     H
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 3/198 (1%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+    +M ++G  P+  +   +L  C    N   G+ +H+ L RS+ + +  + + L+S
Sbjct: 396 ALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLS 455

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y KCG+L +A ++F     K D+V W+S+I+ Y   G  V+A+ +F +M   G  P++ 
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F  V+ ACS T NV  G  I+  +      +  +     ++D+  +    L  A  + +
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAG-KLNEAMDLIE 573

Query: 242 KM-TEKNTVGWTLMITRC 258
           KM  E + + W  ++  C
Sbjct: 574 KMPMEADAIIWGALLGAC 591


>gi|356547226|ref|XP_003542017.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g37170-like [Glycine max]
          Length = 693

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/610 (40%), Positives = 376/610 (61%), Gaps = 30/610 (4%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--TVD---- 334
           P     S +++AC        G+++H+    +     V +   L+DMYAKC   VD    
Sbjct: 85  PSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISNRLLDMYAKCGSLVDAQML 144

Query: 335 ----------------------GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
                                 G ++ +RK+FD M   +  SW A I+GYV +  + +EA
Sbjct: 145 FDEMGHRDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNFSWNAAISGYV-THNQPREA 203

Query: 373 VKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           ++LF  M + +  + N FT +S L A   +    + ++++ + ++    LD+ V ++L+ 
Sbjct: 204 LELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLD 263

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           +Y + G +++AR  F+ + ++++VS+ TM+    ++   E+ F L  ++  +GV  + YT
Sbjct: 264 LYGKCGSLDEARGIFDQMKDRDVVSWTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYT 323

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           FA +L+  +   A   G+++H  ++ +G++      +AL+ MYS+C N   A +VF EM 
Sbjct: 324 FAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMH 383

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
             +++SWTS+I G+A++G    AL  F  +L  G KP+ +TY+ VLSAC+HAGL+ +G +
Sbjct: 384 QPDLVSWTSLIVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLE 443

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           +F S+ ++HG++   +HYAC++DLL RSG   EA   I +MP+  D  +W + LG CR+H
Sbjct: 444 YFHSIKEKHGLMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIH 503

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
           G+ EL K AA+ + E +P++PA +I L+N+YA+AG W  VAN+RK M    ++K+ G SW
Sbjct: 504 GNLELAKRAAKALYEIEPENPATYITLANIYANAGLWSEVANVRKDMDNMGIVKKPGKSW 563

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           IE   +VH F VG+TSHPKT +I+  L +L+ KIKE GY+PDTNFVLH++EEEQK Q L 
Sbjct: 564 IEIKRQVHVFLVGDTSHPKTSDIHEFLGELSKKIKEEGYVPDTNFVLHDVEEEQKEQNLV 623

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSEK+AV FG+IST    PI+VFKNLR C DCHTAIKYIS +  R+I +RDSNRFH  +
Sbjct: 624 YHSEKLAVVFGIISTPPGTPIKVFKNLRTCVDCHTAIKYISKIVQRKITVRDSNRFHCFE 683

Query: 852 DGKCSCNDYW 861
           DG CSC DYW
Sbjct: 684 DGSCSCKDYW 693



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/429 (30%), Positives = 218/429 (50%), Gaps = 51/429 (11%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           RV++A+   +L+ +  + P    YS L+ +C+R R   LG+ VH+    S   P   I N
Sbjct: 70  RVKEAV---ELLHRTDHRPSARVYSTLIAACVRHRALELGRRVHAHTKASNFVPGVFISN 126

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL--- 174
            L+ +Y+KCG L +A  +F  MG+ RD+ SW++MI  Y   G+   A  +F EM +    
Sbjct: 127 RLLDMYAKCGSLVDAQMLFDEMGH-RDLCSWNTMIVGYAKLGRLEQARKLFDEMPQRDNF 185

Query: 175 -------GFC----PNEYC--FSAVIRACSNTEN----------------VAIGHIIYGF 205
                  G+     P E    F  + R   ++ N                + +G  I+G+
Sbjct: 186 SWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTLSSALAASAAIPCLRLGKEIHGY 245

Query: 206 LLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
           L++    + D  V  AL+D++ K GS+D   A  +FD+M +++ V WT MI RC + G  
Sbjct: 246 LIRTE-LNLDEVVWSALLDLYGKCGSLD--EARGIFDQMKDRDVVSWTTMIHRCFEDGRR 302

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            +   LF D++ SG  P+ +T +GV++AC++      GK++H + +  G         +L
Sbjct: 303 EEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGSFAISAL 362

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           V MY+KC   G+   +R+VF+ M   +++SWT++I GY Q+G  D EA+  F  ++Q   
Sbjct: 363 VHMYSKC---GNTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPD-EALHFFELLLQSGT 418

Query: 385 APNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRME 440
            P+  T+  VL AC    L+D  +    Y H++K    L     +   +I + ARSGR +
Sbjct: 419 KPDQVTYVGVLSACTHAGLVDKGLE---YFHSIKEKHGLMHTADHYACVIDLLARSGRFK 475

Query: 441 DARKAFESL 449
           +A    +++
Sbjct: 476 EAENIIDNM 484



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 248/525 (47%), Gaps = 53/525 (10%)

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIG 199
           N +D+VS  +     V+   Q   +   VE+L      P+   +S +I AC     + +G
Sbjct: 47  NPKDLVSEDNKFEEAVDVLCQQKRVKEAVELLHRTDHRPSARVYSTLIAACVRHRALELG 106

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
             ++    K   F   V +   L+DM+ K GS  L  A  +FD+M  ++   W  MI   
Sbjct: 107 RRVHAHT-KASNFVPGVFISNRLLDMYAKCGS--LVDAQMLFDEMGHRDLCSWNTMIVGY 163

Query: 259 TQLGCPRDAIRLFLDM----------ILSGFL----------------------PDRFTL 286
            +LG    A +LF +M           +SG++                       ++FTL
Sbjct: 164 AKLGRLEQARKLFDEMPQRDNFSWNAAISGYVTHNQPREALELFRVMQRHERSSSNKFTL 223

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           S  ++A + +     GK++H + IRT L LD  V  +L+D+Y KC   GS+D++R +FD+
Sbjct: 224 SSALAASAAIPCLRLGKEIHGYLIRTELNLDEVVWSALLDLYGKC---GSLDEARGIFDQ 280

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M D +V+SWT +I    + G R+ E   LF D++Q  V PN +TFA VL AC +    ++
Sbjct: 281 MKDRDVVSWTTMIHRCFEDGRRE-EGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHL 339

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            ++V+ + +  G        ++L+ MY++ G    AR+ F  + + +LVS+ +++  YA+
Sbjct: 340 GKEVHGYMMHAGYDPGSFAISALVHMYSKCGNTRVARRVFNEMHQPDLVSWTSLIVGYAQ 399

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHC 525
           N   ++A      +  +G      T+  +LS  +  G + KG E  H+   K G      
Sbjct: 400 NGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTAD 459

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG---FAARALEIFYKM 581
            Y  +I + +R    + A  +   M  + +   W S++ G   HG    A RA +  Y+ 
Sbjct: 460 HYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLLGGCRIHGNLELAKRAAKALYE- 518

Query: 582 LADGIKP-NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
               I+P N  TYI + +  ++AGL SE   + R   D  GIV++
Sbjct: 519 ----IEPENPATYITLANIYANAGLWSE-VANVRKDMDNMGIVKK 558



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 101/329 (30%), Positives = 161/329 (48%), Gaps = 51/329 (15%)

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C+R     LGK +H  L R++L  + V+ ++L+ LY KCG L+EA  IF  M + RD+VS
Sbjct: 235 CLR-----LGKEIHGYLIRTELNLDEVVWSALLDLYGKCGSLDEARGIFDQMKD-RDVVS 288

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W++MI      G++ +   +F ++++ G  PNEY F+ V+ AC++     +G  ++G+++
Sbjct: 289 WTTMIHRCFEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMM 348

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
             GY      +  AL+ M+ K   +   A +VF++M + + V WT +I    Q G P +A
Sbjct: 349 HAGYDPGSFAIS-ALVHMYSKCG-NTRVARRVFNEMHQPDLVSWTSLIVGYAQNGQPDEA 406

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVD 326
           +  F  ++ SG  PD+ T  GV+SAC+   L   G +  HS   + GL           D
Sbjct: 407 LHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLM-------HTAD 459

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
            YA C +D                            +   GR KEA  +  +M    V P
Sbjct: 460 HYA-CVID---------------------------LLARSGRFKEAENIIDNM---PVKP 488

Query: 387 NHFTFASVLKAC---GNL-LDSNVAEQVY 411
           + F +AS+L  C   GNL L    A+ +Y
Sbjct: 489 DKFLWASLLGGCRIHGNLELAKRAAKALY 517



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/207 (27%), Positives = 102/207 (49%), Gaps = 5/207 (2%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
             DGR ++       + Q G  P+  T++ +L +C      HLGK VH  +  +  +P S
Sbjct: 297 FEDGRREEGFLLFRDLMQSGVRPNEYTFAGVLNACADHAAEHLGKEVHGYMMHAGYDPGS 356

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
             +++L+ +YSKCG+   A ++F  M ++ D+VSW+S+I  Y   G+  +A+H F  +L+
Sbjct: 357 FAISALVHMYSKCGNTRVARRVFNEM-HQPDLVSWTSLIVGYAQNGQPDEALHFFELLLQ 415

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIG-HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            G  P++  +  V+ AC++   V  G    +    K G   +     C +ID+  + S  
Sbjct: 416 SGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHGLMHTADHYAC-VIDLLAR-SGR 473

Query: 233 LESAYKVFDKMTEK-NTVGWTLMITRC 258
            + A  + D M  K +   W  ++  C
Sbjct: 474 FKEAENIIDNMPVKPDKFLWASLLGGC 500



 Score = 40.4 bits (93), Expect = 3.8,   Method: Compositional matrix adjust.
 Identities = 26/104 (25%), Positives = 49/104 (47%), Gaps = 1/104 (0%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG-KLVHSLLTRSK 108
           ++ +  +G+  +A+   +L+ Q G  PD  TY  +L +C  +     G +  HS+  +  
Sbjct: 394 IVGYAQNGQPDEALHFFELLLQSGTKPDQVTYVGVLSACTHAGLVDKGLEYFHSIKEKHG 453

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
           L   +     +I L ++ G   EA  I  +M  K D   W+S++
Sbjct: 454 LMHTADHYACVIDLLARSGRFKEAENIIDNMPVKPDKFLWASLL 497


>gi|449488311|ref|XP_004157997.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Cucumis sativus]
          Length = 785

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/749 (36%), Positives = 430/749 (57%), Gaps = 69/749 (9%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI+ YS+ G + +A  +F  M +K +I+SW+S+++ Y    +  +A +MF +M E   
Sbjct: 102 NSLITRYSRLGQIEKARVVFDEMRDK-NIISWNSIVAGYFQNKRPQEAQNMFDKMSE--- 157

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             N   ++ ++    N   +     ++  +      + +V    A++  +VK  + +  A
Sbjct: 158 -RNTISWNGLVSGYINNGMINEAREVFDRMP-----ERNVVSWTAMVRGYVKEGM-ISEA 210

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +F +M EKN V WT+M+    Q G   +A RLF DM     +P++             
Sbjct: 211 ETLFWQMPEKNVVSWTVMLGGLLQEGRIDEACRLF-DM-----MPEK------------- 251

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                               DV    +++  Y  C V G + ++R +FD M   NV+SWT
Sbjct: 252 --------------------DVVTRTNMIGGY--CQV-GRLVEARMLFDEMPRRNVVSWT 288

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA---CGNLLDSNVAEQVYTH 413
            +ITGYVQ+   D  A KLF  M +     N  ++ ++LK    CG L     +E     
Sbjct: 289 TMITGYVQNQQVDI-ARKLFEVMPE----KNEVSWTAMLKGYTNCGRL--DEASELFNAM 341

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K   ++  C  N++I  + ++G +  AR+ F+ + EK+  +++ M+  Y +      A
Sbjct: 342 PIK---SVVAC--NAMILCFGQNGEVPKARQVFDQMREKDEGTWSAMIKVYERKGLELDA 396

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            EL   ++  G+  +  +  S+LS  + +  +  G +IHA++++S F+ +  + + L+SM
Sbjct: 397 LELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLSM 456

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y +C N+  A QVF     ++V+ W S+ITG+A+HG    AL +F+ M   GI P+ +T+
Sbjct: 457 YIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDVTF 516

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           + VLSACS+ G + +G + F SM  ++ + Q++EHYACMVDLLGR+G L EA++ I  MP
Sbjct: 517 VGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAGKLNEAMDLIEKMP 576

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           + AD ++W   LGACR H   +L + AA+ +L  +P++    ILLSN+YAS G W+ VA 
Sbjct: 577 MEADAIIWGALLGACRTHMKLDLAEVAAKKLLVLEPKNAGPFILLSNIYASQGRWDDVAE 636

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS-HPKTLEIYAELDQLALKIKEFGYLP 772
           +R+ M++R + K  GCSWI  + KVHKF  G++S HP+  EI   L+ L+  ++E GY P
Sbjct: 637 LRRNMRDRRVSKYPGCSWIVVEKKVHKFTGGDSSGHPEHSEINRILEWLSGLLREAGYYP 696

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D +FVLH+++EE+KVQ L  HSEK+AVA+GL+      PIRV KNLRVCGDCH AIK I+
Sbjct: 697 DQSFVLHDVDEEEKVQSLEYHSEKLAVAYGLLKIPIGMPIRVMKNLRVCGDCHAAIKLIA 756

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            VTGREI+LRD+NRFHH KDG CSC DYW
Sbjct: 757 KVTGREIILRDANRFHHFKDGSCSCRDYW 785



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 123/518 (23%), Positives = 236/518 (45%), Gaps = 53/518 (10%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI-LNSLISLYSKCGDLNEANKIFKSMGN 141
           ++ ++ + +R   LG++  + +   ++   ++I  NS+++ Y +     EA  +F  M +
Sbjct: 98  IISRNSLITRYSRLGQIEKARVVFDEMRDKNIISWNSIVAGYFQNKRPQEAQNMFDKM-S 156

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA------CSNTE- 194
           +R+ +SW+ ++S Y+N G   +A  +F  M E     N   ++A++R        S  E 
Sbjct: 157 ERNTISWNGLVSGYINNGMINEAREVFDRMPE----RNVVSWTAMVRGYVKEGMISEAET 212

Query: 195 --------NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV--------------D 232
                   NV    ++ G LL+ G  D      C L DM  +  V               
Sbjct: 213 LFWQMPEKNVVSWTVMLGGLLQEGRIDE----ACRLFDMMPEKDVVTRTNMIGGYCQVGR 268

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  +FD+M  +N V WT MIT   Q      A +LF  M     +     L G  + 
Sbjct: 269 LVEARMLFDEMPRRNVVSWTTMITGYVQNQQVDIARKLFEVMPEKNEVSWTAMLKGYTN- 327

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C  L+   + +  ++  I++ +A +  + C           +G V  +R+VFD+M + + 
Sbjct: 328 CGRLD--EASELFNAMPIKSVVACNAMILC--------FGQNGEVPKARQVFDQMREKDE 377

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +W+A+I  Y +  G + +A++LF  M +  + PN  +  SVL  C  L + +   +++ 
Sbjct: 378 GTWSAMIKVY-ERKGLELDALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHA 436

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             V+    LD  V + L+SMY + G +  A++ F+    K++V +N+++  YA++    +
Sbjct: 437 QLVRSQFDLDVYVASVLLSMYIKCGNLAKAKQVFDRFAVKDVVMWNSIITGYAQHGLGVE 496

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALI 531
           A  + H++  +G+     TF  +LS  S  G + KG +I   +  K   E     Y  ++
Sbjct: 497 ALRVFHDMHFSGIMPDDVTFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMV 556

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            +  R   +  A  + ++M  + + I W +++     H
Sbjct: 557 DLLGRAGKLNEAMDLIEKMPMEADAIIWGALLGACRTH 594



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 99/198 (50%), Gaps = 3/198 (1%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+    +M ++G  P+  +   +L  C    N   G+ +H+ L RS+ + +  + + L+S
Sbjct: 396 ALELFRMMQREGIRPNFPSLISVLSVCAGLANLDHGREIHAQLVRSQFDLDVYVASVLLS 455

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y KCG+L +A ++F     K D+V W+S+I+ Y   G  V+A+ +F +M   G  P++ 
Sbjct: 456 MYIKCGNLAKAKQVFDRFAVK-DVVMWNSIITGYAQHGLGVEALRVFHDMHFSGIMPDDV 514

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F  V+ ACS T NV  G  I+  +      +  +     ++D+  +    L  A  + +
Sbjct: 515 TFVGVLSACSYTGNVKKGLEIFNSMETKYQVEQKIEHYACMVDLLGRAG-KLNEAMDLIE 573

Query: 242 KM-TEKNTVGWTLMITRC 258
           KM  E + + W  ++  C
Sbjct: 574 KMPMEADAIIWGALLGAC 591


>gi|297739711|emb|CBI29893.3| unnamed protein product [Vitis vinifera]
          Length = 784

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 231/575 (40%), Positives = 365/575 (63%), Gaps = 6/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V++ C        G+++H+  I+T     V +   L+ +Y KC   G   D+R+V D M 
Sbjct: 16  VLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLG---DARRVLDEMP 72

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV+SWTA+I+GY Q G    EA+ LF +M+    APN FTFA+VL +C +     +  
Sbjct: 73  ERNVVSWTAMISGYSQRG-YASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGR 131

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q+++  +K        VG+SL+ MYA++G++ +AR+ F+ L E+++VS   ++  YA+  
Sbjct: 132 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLPERDVVSCTAIISGYAQLG 191

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A +L   ++  G+ ++  T+AS+L+  S + A+  G Q+H+ ++++       + N
Sbjct: 192 LDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSHVLRAKLPFYVVLQN 251

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IK 587
           +LI MYS+C ++  + ++F  M +R VISW +M+ G++KHG    A+E+F  M  +  +K
Sbjct: 252 SLIDMYSKCGSLTYSRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVK 311

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEH-GIVQRMEHYACMVDLLGRSGSLTEAL 646
           P+ +T++AVLS CSH G+   G + F  M ++  G    +EHY C+VDL GR+G + EA 
Sbjct: 312 PDSVTFLAVLSGCSHGGMEDRGLEIFYEMVNQKDGFEPEIEHYGCVVDLFGRAGRVEEAF 371

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           EFI+ MP      +W + LGACRVH +  +G+  A  +LE + ++   +++LSNLYASAG
Sbjct: 372 EFIKKMPFEPTAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAG 431

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W+ V  +R+ MKE+ +IKE G SWIE D  +H FH  + SHP+  E++A++ +L++KIK
Sbjct: 432 RWDDVRTVRELMKEKAVIKEPGRSWIELDQTLHTFHASDRSHPRKEEVFAKVRELSIKIK 491

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+P+ + VL+++++EQK + L  HSEK+A+AFGLI T    P+R+ KNLR+C DCH 
Sbjct: 492 EAGYVPELSCVLYDVDDEQKEKILQGHSEKLALAFGLICTPGGTPVRIIKNLRICVDCHN 551

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K++S V GRE+ LRD NRFHHI  G CSC DYW
Sbjct: 552 FAKFLSRVYGREVSLRDKNRFHHIVGGTCSCGDYW 586



 Score =  214 bits (546), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 163/544 (29%), Positives = 261/544 (47%), Gaps = 58/544 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G   +   Y  +L  CI       G+ VH+ + ++  EP   +   LI LY+KC  
Sbjct: 1   MGIQGLEVEFQGYDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRC 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L +A ++   M  +R++VSW++MIS Y  RG   +A+H+FVEML  G  PNE+ F+ V+ 
Sbjct: 61  LGDARRVLDEM-PERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLT 119

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           +C+++    +G  I+  ++K   F+S + VG +L+DM+ K     E A +VFD + E++ 
Sbjct: 120 SCTSSSGFQLGRQIHSLVIKTS-FESHIFVGSSLLDMYAKAGKICE-ARRVFDGLPERDV 177

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V  T +I+   QLG   +A+ LF  +   G   +  T + V++A S L     G+Q+HS 
Sbjct: 178 VSCTAIISGYAQLGLDEEALDLFRRLQREGMRSNYVTYASVLTALSGLAALDHGRQVHSH 237

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +R  L   V +  SL+DMY+KC   GS+  SR++FD M +  V+SW A++ GY +  G 
Sbjct: 238 VLRAKLPFYVVLQNSLIDMYSKC---GSLTYSRRIFDSMPERTVISWNAMLVGYSKH-GL 293

Query: 369 DKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            +EAV+LF  M  + +V P+  TF +VL  C             +H     R L+     
Sbjct: 294 GREAVELFKLMKEENKVKPDSVTFLAVLSGC-------------SHGGMEDRGLE----- 335

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
               ++      +D        FE  +  Y  +VD + +    E+AFE    I+      
Sbjct: 336 ----IFYEMVNQKDG-------FEPEIEHYGCVVDLFGRAGRVEEAFEF---IKKMPFEP 381

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARI--IKSGFESNHCIYNALISMYSRCANVEAAFQ 545
           +A  + SLL        +  GE +  R+  I+S    N+ I + L +   R  +V    +
Sbjct: 382 TAAIWGSLLGACRVHQNVHIGEFVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRE 441

Query: 546 VFKEMEDRNVI-----SWTSMITGFAKHGFAA------RALEIFYKMLADGIKPNGITYI 594
           + KE   + VI     SW  +      H F A      R  E+F K+    IK     Y+
Sbjct: 442 LMKE---KAVIKEPGRSWIELDQTL--HTFHASDRSHPRKEEVFAKVRELSIKIKEAGYV 496

Query: 595 AVLS 598
             LS
Sbjct: 497 PELS 500



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 103/406 (25%), Positives = 181/406 (44%), Gaps = 53/406 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M   G  P+  T++ +L SC  S  F LG+ +HSL+ ++  E +  + 
Sbjct: 90  GYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLGRQIHSLVIKTSFESHIFVG 149

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SL+ +Y+K G + EA ++F  +  +RD+VS +++IS Y   G   +A+ +F  +   G 
Sbjct: 150 SSLLDMYAKAGKICEARRVFDGL-PERDVVSCTAIISGYAQLGLDEEALDLFRRLQREGM 208

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
             N   +++V+ A S    +  G  ++  +L+       V +  +LIDM+ K GS  L  
Sbjct: 209 RSNYVTYASVLTALSGLAALDHGRQVHSHVLR-AKLPFYVVLQNSLIDMYSKCGS--LTY 265

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACS 294
           + ++FD M E+  + W  M+   ++ G  R+A+ LF  M     + PD  T   V+S CS
Sbjct: 266 SRRIFDSMPERTVISWNAMLVGYSKHGLGREAVELFKLMKEENKVKPDSVTFLAVLSGCS 325

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              +   G ++    +      +       ++ Y  C VD        +F R        
Sbjct: 326 HGGMEDRGLEIFYEMVNQKDGFE-----PEIEHYG-CVVD--------LFGR-------- 363

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
                       GR +EA +    M      P    + S+L AC       V + V+   
Sbjct: 364 -----------AGRVEEAFEFIKKM---PFEPTAAIWGSLLGAC------RVHQNVHIGE 403

Query: 415 VKRGRALD---DCVGNSLI--SMYARSGRMEDARKAFESLFEKNLV 455
               R L+   +  GN +I  ++YA +GR +D R   E + EK ++
Sbjct: 404 FVARRLLEIESENAGNYVILSNLYASAGRWDDVRTVRELMKEKAVI 449



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 49/162 (30%), Positives = 93/162 (57%), Gaps = 1/162 (0%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           + S+L+   S  AI +G+++HA +IK+ +E    +   LI +Y++C  +  A +V  EM 
Sbjct: 13  YDSVLTECISQTAIREGQRVHAHMIKTCYEPPVYLRTRLIVLYNKCRCLGDARRVLDEMP 72

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           +RNV+SWT+MI+G+++ G+A+ AL +F +ML  G  PN  T+  VL++C+ +     G +
Sbjct: 73  ERNVVSWTAMISGYSQRGYASEALHLFVEMLMSGTAPNEFTFATVLTSCTSSSGFQLG-R 131

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
              S+  +      +   + ++D+  ++G + EA      +P
Sbjct: 132 QIHSLVIKTSFESHIFVGSSLLDMYAKAGKICEARRVFDGLP 173


>gi|359481513|ref|XP_003632631.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Vitis vinifera]
          Length = 755

 Score =  483 bits (1243), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 266/734 (36%), Positives = 434/734 (59%), Gaps = 11/734 (1%)

Query: 43  SEPLSNRLIYHLNDGRV-QKAIFTLDLMTQK-GNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
           +E  SN  I  L   ++  +AI   + + +K G    L TY+ L+ +C   R+   GK +
Sbjct: 26  AEQSSNEYITSLCKQKLFNEAIKAFEFLQKKTGFCLTLSTYAYLISACSYLRSLEHGKKI 85

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           H  + +SK  P+  + N ++++Y KC  L +A K+F +M  +R++VSW+S+I+ Y   G+
Sbjct: 86  HDHMLKSKSHPDLTLQNHILNMYGKCKSLKDAQKVFDAM-PERNVVSWTSVIAGYSQNGQ 144

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
             +A+  + +ML+ G  P+++ F ++I+ACS+  ++ +G  ++  +LK   F + +    
Sbjct: 145 GGNALEFYFQMLQSGVMPDQFTFGSIIKACSSLGDIGLGRQLHAHVLK-SEFGAHIIAQN 203

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-F 279
           ALI M+ K ++ ++ A  VF +M  ++ + W  MI   +QLG   +A+  F +M+  G +
Sbjct: 204 ALISMYTKSNLIID-ALDVFSRMATRDLISWGSMIAGFSQLGYELEALCYFKEMLHQGVY 262

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           LP+ F    V SACS L     G+QLH  +I+ GL  DV  GCSL DMYAKC   G +  
Sbjct: 263 LPNEFIFGSVFSACSSLLQPEYGRQLHGMSIKFGLGRDVFAGCSLCDMYAKC---GLLSC 319

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +R VF ++   ++++W AII G+   GG  KEA+  FS M    + P+  T  S+L AC 
Sbjct: 320 ARVVFYQIGRPDLVAWNAIIAGFAY-GGDAKEAIAFFSQMRHQGLIPDEITVRSLLCACT 378

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYN 458
           +  +     QV+ +  K G  LD  V N+L++MYA+   + DA   FE +    +LVS+N
Sbjct: 379 SPSELYQGMQVHGYINKMGLDLDVPVCNTLLTMYAKCSELRDAIFFFEEMRCNADLVSWN 438

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            ++ A  ++  +E+ F LL  +  +       T  ++L  ++   +I  G Q+H   +K+
Sbjct: 439 AILTACMRHDQAEEVFRLLKLMCISQHRPDYITLTNVLGASAETVSIEIGNQVHCYALKT 498

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
           G   +  + N LI +Y++C +++ A ++F  M + +V+SW+S+I G+A+ G+   AL++F
Sbjct: 499 GLNCDTSVTNGLIDLYAKCGSLKTAHKIFDSMINPDVVSWSSLILGYAQFGYGEEALKLF 558

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
             M    +KPN +T++ VL+ACSH GL+ EGWK + +M  E GI    EH +CMVDLL R
Sbjct: 559 KTMRRLDVKPNHVTFVGVLTACSHVGLVEEGWKLYGTMEKEFGIAPTREHCSCMVDLLAR 618

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           +G L EA  FI  M    D++VW+T L AC+ HG+ ++GK AAE IL+ DP + AAH+LL
Sbjct: 619 AGCLNEAEGFIHQMAFDPDIVVWKTLLAACKTHGNVDVGKRAAENILKIDPSNSAAHVLL 678

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
            N+YAS G+WE VA +R  MK+R + K  G SWIE  +++H F V ++ HP+  +IY  L
Sbjct: 679 CNIYASKGNWEDVARLRSLMKQRGVRKVPGQSWIEVKDRIHVFFVEDSLHPERNKIYTML 738

Query: 759 DQLALKIKEFGYLP 772
           ++L L++ + GY+P
Sbjct: 739 EELLLQMLDAGYVP 752


>gi|357111956|ref|XP_003557776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33990-like [Brachypodium distachyon]
          Length = 747

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/690 (36%), Positives = 410/690 (59%), Gaps = 12/690 (1%)

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           F P+ + F ++IRA  +  + A    ++   L+ G     V    +L+  +++    +  
Sbjct: 66  FRPDGFTFPSLIRAAPSNASAAQ---LHACALRLGLVRPSVFTSGSLVHAYLRFG-RISE 121

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           AYKVFD+M+E++   W  M++   +     +A+ LF  M+  G   D  T+S V+  C  
Sbjct: 122 AYKVFDEMSERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVL 181

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L        +H +A++ GL  ++ V  +L+D+Y K    G +++++ VF  M   ++++W
Sbjct: 182 LGDQVLALVMHVYAVKHGLDKELFVCNALIDVYGKL---GMLEEAQCVFHGMECRDLVTW 238

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            +II+G  Q G +   A+K+F  M    V+P+  T  S+  A     D   A+ ++ + +
Sbjct: 239 NSIISGCEQRG-QTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVM 297

Query: 416 KRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +RG  +DD + GN+++ MYA+   +E A++ F+S+  ++ VS+NT++  Y +N  + +A 
Sbjct: 298 RRGWDVDDIIAGNAIVDMYAKLSNIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAV 357

Query: 475 ELL-HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
           E   H  +  G+     TF S+L   S +GA+ +G ++HA  IK G   +  +   LI +
Sbjct: 358 ERYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDL 417

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C  +  A  +F++M  R+   W ++I+G   HG  A AL +F +M  +GIKP+ +T+
Sbjct: 418 YAKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTF 477

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           +++L+ACSHAGL+ +G   F  M   + IV   +HYACM D+LGR+G L EA  FI++MP
Sbjct: 478 VSLLAACSHAGLVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMP 537

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           +  D  VW   LGACR+HG+ E+GK A++ + E DP++   ++L+SN+YA  G W+ V  
Sbjct: 538 IKPDSAVWGALLGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAKVGKWDGVDE 597

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS--HPKTLEIYAELDQLALKIKEFGYL 771
           +R  ++ +NL K  G S IE    V+ F+ G  +  HP+  EI AEL  L  KI+  GY+
Sbjct: 598 VRSLVRRQNLQKTPGWSSIEVKRSVNVFYSGNQTEPHPQHEEIQAELRSLLAKIRSVGYV 657

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
            D +FVL ++E+++K   L  HSE++A+AFG+I+T    P+ ++KNLRVCGDCH A KYI
Sbjct: 658 SDYSFVLQDVEDDEKEHILNNHSERLAIAFGIINTPSRTPLHIYKNLRVCGDCHNATKYI 717

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S +T REI++RDSNRFHH KDG CSC D+W
Sbjct: 718 SQITEREIIVRDSNRFHHFKDGHCSCGDFW 747



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 132/501 (26%), Positives = 247/501 (49%), Gaps = 19/501 (3%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  L+++     N    +L    L    + P+     SL+  Y + G ++EA K+
Sbjct: 68  PDGFTFPSLIRAA--PSNASAAQLHACALRLGLVRPSVFTSGSLVHAYLRFGRISEAYKV 125

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M ++RD+ +W++M+S      +  +A+ +F  M+  G   +    S+V+  C    +
Sbjct: 126 FDEM-SERDVPAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGD 184

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
             +  +++ + +K G  D ++ V  ALID++ K  + LE A  VF  M  ++ V W  +I
Sbjct: 185 QVLALVMHVYAVKHG-LDKELFVCNALIDVYGKLGM-LEEAQCVFHGMECRDLVTWNSII 242

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           + C Q G    A+++F  M  SG  PD  TL  + SA ++     S K LH + +R G  
Sbjct: 243 SGCEQRGQTAAALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWD 302

Query: 316 L-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           + D+  G ++VDMYAK +   +++ ++++FD M   + +SW  +ITGY+Q+ G   EAV+
Sbjct: 303 VDDIIAGNAIVDMYAKLS---NIEAAQRMFDSMPVQDSVSWNTLITGYMQN-GLANEAVE 358

Query: 375 LFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            +  M + + +     TF SVL A  +L       +++  ++K G  +D  VG  LI +Y
Sbjct: 359 RYGHMQKHEGLKAIQGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLY 418

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+ G++ +A   FE +  ++   +N ++     + +  +A  L   ++  G+     TF 
Sbjct: 419 AKCGKLAEAMLLFEKMPRRSTGPWNAIISGLGVHGHGAEALTLFSRMQQEGIKPDHVTFV 478

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFE----SNHCIYNALISMYSRCANVEAAFQVFKE 549
           SLL+  S  G + +G      +++  ++    + H  Y  +  M  R   ++ AF   + 
Sbjct: 479 SLLAACSHAGLVDQGRSFF-DVMQVTYDIVPIAKH--YACMADMLGRAGQLDEAFNFIQN 535

Query: 550 MEDR-NVISWTSMITGFAKHG 569
           M  + +   W +++     HG
Sbjct: 536 MPIKPDSAVWGALLGACRIHG 556



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 216/460 (46%), Gaps = 44/460 (9%)

Query: 45  PLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSL 103
           P  N ++  L  + R  +A+     M  +G   D  T S +L  C+   +  L  ++H  
Sbjct: 135 PAWNAMLSGLCRNARAAEAVGLFGRMVGEGVAGDTVTVSSVLPMCVLLGDQVLALVMHVY 194

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
             +  L+    + N+LI +Y K G L EA  +F  M   RD+V+W+S+IS    RG+   
Sbjct: 195 AVKHGLDKELFVCNALIDVYGKLGMLEEAQCVFHGM-ECRDLVTWNSIISGCEQRGQTAA 253

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+ MF  M   G  P+     ++  A +   +      ++ ++++ G+   D+  G A++
Sbjct: 254 ALKMFQGMRGSGVSPDVLTLVSLASAIAQGGDGRSAKSLHCYVMRRGWDVDDIIAGNAIV 313

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPD 282
           DM+ K S ++E+A ++FD M  +++V W  +IT   Q G   +A+  +  M    G    
Sbjct: 314 DMYAKLS-NIEAAQRMFDSMPVQDSVSWNTLITGYMQNGLANEAVERYGHMQKHEGLKAI 372

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
           + T   V+ A S L     G ++H+ +I+ GL +DV VG  L+D+YAKC   G + ++  
Sbjct: 373 QGTFVSVLPAYSHLGALQQGMRMHALSIKIGLNVDVYVGTCLIDLYAKC---GKLAEAML 429

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GN 400
           +F++M   +   W AII+G +   G   EA+ LFS M Q  + P+H TF S+L AC    
Sbjct: 430 LFEKMPRRSTGPWNAIISG-LGVHGHGAEALTLFSRMQQEGIKPDHVTFVSLLAACSHAG 488

Query: 401 LLDSN---------------VAEQVYTHAVKRGRA----------------LDDCVGNSL 429
           L+D                 +A+     A   GRA                 D  V  +L
Sbjct: 489 LVDQGRSFFDVMQVTYDIVPIAKHYACMADMLGRAGQLDEAFNFIQNMPIKPDSAVWGAL 548

Query: 430 ISMYARSGRMEDARKAFESLFE---KNLVSYNTMVDAYAK 466
           +      G +E  + A ++LFE   +N+  Y  M + YAK
Sbjct: 549 LGACRIHGNVEMGKVASQNLFELDPENVGYYVLMSNMYAK 588


>gi|357140731|ref|XP_003571917.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Brachypodium distachyon]
          Length = 695

 Score =  483 bits (1242), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/681 (37%), Positives = 405/681 (59%), Gaps = 7/681 (1%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            +A +++C    ++ +G  ++  L+  G   +   +   LI M+     D+ SA ++FD 
Sbjct: 20  LAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYSH-CADVPSAVRLFDA 78

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M   N V WT +++  TQ    RDA+  F  M  +G +P +F LS    A + L    +G
Sbjct: 79  MPRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALSSAARAAAALAARHAG 138

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
            QLH   +R G   ++ V  +L DMY+K    G + ++ +VFD+M   + ++WTA+I GY
Sbjct: 139 AQLHCVGVRLGFDAELFVASNLADMYSK---SGLLVEACRVFDQMPQKDAVAWTAMIDGY 195

Query: 363 VQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            ++G  +  AV  F DM  +G V  +     SVL A G L D  +A  +++  +K G   
Sbjct: 196 AKNGNLEA-AVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLARAIHSCVMKSGFEQ 254

Query: 422 DDCVGNSLISMYARSGRMEDARKAFE-SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           +  V N+L  MYA++  M++A +  +      N+VS  +++D Y +    EKA  +  E+
Sbjct: 255 EVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGYIETDCIEKALLMFIEL 314

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              GV  + +TF+S++ G +    + +G Q+HA +IK+   S+  + + L+ MY +C  +
Sbjct: 315 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSSTLLDMYGKCGLI 374

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             + Q+FKE+E    I+W + I   A+HG    A+  F +M + GI+PN IT++++L+AC
Sbjct: 375 SLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRMTSSGIRPNHITFVSLLTAC 434

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SHAGL+ EG K+F SM D HGI  + EHY+C++D+ GR+G L EA +FI  MP+  +   
Sbjct: 435 SHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLDEAEKFIGEMPVKPNAYG 494

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W + LGACR+ G+ ELG+ AA+ +++ +P +   H+ LS +YAS G WE V  +RK M++
Sbjct: 495 WCSLLGACRMRGNKELGEIAADNMMKLEPDNTGVHVSLSGIYASLGQWEDVKAVRKLMRD 554

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             + K  G SW++++ K H F   + SHP+  +IY +L++L  +IKE GY+PDT F+   
Sbjct: 555 NRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQEKIYEKLEELYERIKEEGYVPDTRFLPCN 614

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           LE+  K + L  HSE+IAVAF LIS   +KPI V KNLR+C DCH+A+K+IS V  R+I+
Sbjct: 615 LEDTAKQRILRYHSERIAVAFALISMPATKPIIVKKNLRICADCHSALKFISKVENRDII 674

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD++RFHH   G CSC DYW
Sbjct: 675 VRDNSRFHHFVKGGCSCGDYW 695



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/504 (27%), Positives = 252/504 (50%), Gaps = 22/504 (4%)

Query: 72  KGNHP-DLDTYSLL-----LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYS 124
           +G H   LDT + L     L+SC R+ +  LG+ +H+ L  S     S  L N LI++YS
Sbjct: 5   RGQHSRSLDTATSLRLAAPLQSCGRAGDLRLGRCLHARLVLSGAAAASTFLANHLITMYS 64

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
            C D+  A ++F +M  + ++VSW++++S         DA+  F  M   G  P ++  S
Sbjct: 65  HCADVPSAVRLFDAM-PRPNLVSWTTLVSGLTQNSMHRDALAAFSSMCRAGLVPTQFALS 123

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +  RA +       G  ++   ++ G FD+++ V   L DM+ K  + +E A +VFD+M 
Sbjct: 124 SAARAAAALAARHAGAQLHCVGVRLG-FDAELFVASNLADMYSKSGLLVE-ACRVFDQMP 181

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGK 303
           +K+ V WT MI    + G    A+  F DM   G +  D+  L  V+SA   L+     +
Sbjct: 182 QKDAVAWTAMIDGYAKNGNLEAAVIAFRDMRREGLVGADQHVLCSVLSASGGLKDGWLAR 241

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH---NVMSWTAIIT 360
            +HS  +++G   +V V  +L DMYAK      +D++ +V    +D    NV+S T++I 
Sbjct: 242 AIHSCVMKSGFEQEVAVRNALTDMYAKAA---DMDNAARVVK--IDQGSLNVVSATSLID 296

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY+++   +K A+ +F ++ +  V PN FTF+S++K C          Q++   +K    
Sbjct: 297 GYIETDCIEK-ALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLI 355

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            D  V ++L+ MY + G +  + + F+ +     +++N  ++  A++ +  +A      +
Sbjct: 356 SDSFVSSTLLDMYGKCGLISLSIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRM 415

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCAN 539
             +G+  +  TF SLL+  S  G + +G +  ++     G E     Y+ +I MY R   
Sbjct: 416 TSSGIRPNHITFVSLLTACSHAGLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGR 475

Query: 540 VEAAFQVFKEMEDR-NVISWTSMI 562
           ++ A +   EM  + N   W S++
Sbjct: 476 LDEAEKFIGEMPVKPNAYGWCSLL 499



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 159/366 (43%), Gaps = 53/366 (14%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           L + +HS + +S  E    + N+L  +Y+K  D++ A ++ K      ++VS +S+I  Y
Sbjct: 239 LARAIHSCVMKSGFEQEVAVRNALTDMYAKAADMDNAARVVKIDQGSLNVVSATSLIDGY 298

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           +       A+ MF+E+   G  PNE+ FS++I+ C+    +  G  ++  ++K     SD
Sbjct: 299 IETDCIEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLI-SD 357

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
             V   L+DM+ K G + L  + ++F ++     + W   I    Q G  R+AIR F  M
Sbjct: 358 SFVSSTLLDMYGKCGLISL--SIQLFKEIEYHTDIAWNAAINVLAQHGHGREAIRAFDRM 415

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             SG  P+  T   +++ACS                                        
Sbjct: 416 TSSGIRPNHITFVSLLTACSHA-------------------------------------- 437

Query: 335 GSVDDSRKVFDRMLDHNVMS-----WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           G VD+  K F  M DH+ +      ++ II  Y ++G  D EA K   +M    V PN +
Sbjct: 438 GLVDEGLKYFYSMKDHHGIEPKGEHYSCIIDMYGRAGRLD-EAEKFIGEM---PVKPNAY 493

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
            + S+L AC    +  + E    + +K     +  V  SL  +YA  G+ ED  KA   L
Sbjct: 494 GWCSLLGACRMRGNKELGEIAADNMMKL-EPDNTGVHVSLSGIYASLGQWEDV-KAVRKL 551

Query: 450 FEKNLV 455
              N +
Sbjct: 552 MRDNRI 557



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 54/207 (26%), Positives = 100/207 (48%), Gaps = 7/207 (3%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           ++KA+     + ++G  P+  T+S ++K C        G  +H+ + ++ L  +S + ++
Sbjct: 304 IEKALLMFIELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAEVIKTSLISDSFVSST 363

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+ +Y KCG ++ + ++FK +    DI +W++ I+     G   +AI  F  M   G  P
Sbjct: 364 LLDMYGKCGLISLSIQLFKEIEYHTDI-AWNAAINVLAQHGHGREAIRAFDRMTSSGIRP 422

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVDLESA 236
           N   F +++ ACS+   V  G + Y + +K   G         C +IDM+ +    L+ A
Sbjct: 423 NHITFVSLLTACSHAGLVDEG-LKYFYSMKDHHGIEPKGEHYSC-IIDMYGRAG-RLDEA 479

Query: 237 YKVFDKMTEK-NTVGWTLMITRCTQLG 262
            K   +M  K N  GW  ++  C   G
Sbjct: 480 EKFIGEMPVKPNAYGWCSLLGACRMRG 506


>gi|302761366|ref|XP_002964105.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
 gi|300167834|gb|EFJ34438.1| hypothetical protein SELMODRAFT_82024 [Selaginella moellendorffii]
          Length = 713

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 255/657 (38%), Positives = 394/657 (59%), Gaps = 13/657 (1%)

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
            D +  +G  L+D + K    L  A   F ++T  N   W +++    Q G PR A  LF
Sbjct: 63  LDRNTFLGNVLVDAYSKHG-SLHGAQLAFGRITLHNAHSWNILMAAYAQNGHPRGAATLF 121

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
             M   G  P+  TLS  + AC+       G++L+       L +D  V  SL+ MY +C
Sbjct: 122 HWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEIDSHVESSLITMYGRC 181

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
                ++++ + FDR  + +V+ WTA+I+ Y  +  R   A++L   M    +     T+
Sbjct: 182 R---EIEEAERAFDRSPEKDVVCWTAMISAYAHNW-RTSRALELVRRMDLEGIKLGLPTY 237

Query: 392 ASVLKACGNLLD--SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
            S+L AC + +D  + VA      A+   R+    V  +L+++Y + GR++DAR+  +++
Sbjct: 238 VSLLDACASTMDLRNGVAFHQRAAAIGLDRS-STVVAGTLVNLYGKCGRVDDARRVLDAM 296

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
             +  VS+  M+ AYA+N N+ +A  L   ++  G   S  T  S++   + +G +  G+
Sbjct: 297 PVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGK 356

Query: 510 QIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFA 566
           +IHARI  S  F  +  + NA+I+MY +C N+E A +VF+   +  R+V++WT+MI  +A
Sbjct: 357 RIHARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYA 416

Query: 567 KHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           ++G    A+E+F +ML DG  +PN +T+++VL ACSH G + + W+HF SM  + G+   
Sbjct: 417 QNGVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHLGQLEQAWEHFCSMGPDFGVPPA 476

Query: 626 MEHYACMVDLLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
            +HY C+VDLLGR+G L EA + + R     ADV+ W  FL AC+++GD E  + AA+ +
Sbjct: 477 GDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLERSQRAAKRV 536

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
            E +P++ A  +LLSN+YA+ G    VA IR  MK   + K AG SWIE +N+VH+F V 
Sbjct: 537 SELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEINNRVHEFMVS 596

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           + SHP+ LEIY+EL++L  +IKE GY+PDT  VL +++EE+KVQ L  HSE++A+A G+I
Sbjct: 597 DVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKVQLLGYHSERLAMALGII 656

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ST     +RV KNLRVC DCH A K+IS + GR+I++RD++RFHH KDG CSC DYW
Sbjct: 657 STPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVCSCGDYW 713



 Score =  167 bits (422), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 222/449 (49%), Gaps = 26/449 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  + A      M  +G  P+  T S  L +C  +RN  LG+ ++ L+    LE +
Sbjct: 108 YAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRKLNELIASEALEID 167

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S + +SLI++Y +C ++ EA + F     K D+V W++MIS+Y +  +   A+ +   M 
Sbjct: 168 SHVESSLITMYGRCREIEEAERAFDRSPEK-DVVCWTAMISAYAHNWRTSRALELVRRMD 226

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
             G       + +++ AC++T ++  G   +      G   S   V   L++++ K G V
Sbjct: 227 LEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRSSTVVAGTLVNLYGKCGRV 286

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A +V D M  + +V WT MI    Q G   +AI LF  M L G  P   TL  VV 
Sbjct: 287 D--DARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVD 344

Query: 292 ACSELELFTSGKQLHSWAIRT--GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RM 347
           +C+ L   + GK++H+  IR+    +  + +  +++ MY KC   G+++ +R+VF+   +
Sbjct: 345 SCAVLGTLSLGKRIHA-RIRSSPSFSQSLMLLNAVITMYGKC---GNLELAREVFECVPL 400

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNV 406
              +V++WTA+I  Y Q+ G  +EA++LF +M I G   PN  TF SVL AC +L     
Sbjct: 401 RTRSVVTWTAMIRAYAQN-GVGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSHL---GQ 456

Query: 407 AEQVYTHAVKRGRALDDCVGNS----LISMYARSGRMEDARKAF--ESLFEKNLVSYNTM 460
            EQ + H    G              L+ +  R+GR+ +A K       FE ++V +   
Sbjct: 457 LEQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAF 516

Query: 461 VDAYAKNLN---SEKAFELLHEIEDTGVG 486
           + A   N +   S++A + + E+E   V 
Sbjct: 517 LSACQMNGDLERSQRAAKRVSELEPENVA 545



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 232/505 (45%), Gaps = 28/505 (5%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           ++ Y+ LL  C   R     + +H+ +   KL+ N+ + N L+  YSK G L+ A   F 
Sbjct: 35  INDYASLLWQC---RGLDEVRKLHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFG 91

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            +    +  SW+ ++++Y   G    A  +F  M   G  PN    S  + AC+   N+A
Sbjct: 92  RI-TLHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLA 150

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +G  +   L+     + D  V  +LI M+ +   ++E A + FD+  EK+ V WT MI+ 
Sbjct: 151 LGRKL-NELIASEALEIDSHVESSLITMYGRCR-EIEEAERAFDRSPEKDVVCWTAMISA 208

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL- 316
                    A+ L   M L G      T   ++ AC+      +G   H  A   GL   
Sbjct: 209 YAHNWRTSRALELVRRMDLEGIKLGLPTYVSLLDACASTMDLRNGVAFHQRAAAIGLDRS 268

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
              V  +LV++Y KC   G VDD+R+V D M     +SWTA+I  Y Q+G    EA+ LF
Sbjct: 269 STVVAGTLVNLYGKC---GRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGN-AAEAINLF 324

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--NSLISMYA 434
             M      P+  T  SV+ +C  L   ++ ++++   ++   +    +   N++I+MY 
Sbjct: 325 QCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIHAR-IRSSPSFSQSLMLLNAVITMYG 383

Query: 435 RSGRMEDARKAFE--SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYT 491
           + G +E AR+ FE   L  +++V++  M+ AYA+N   E+A EL  E + D G   +  T
Sbjct: 384 KCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNGVGEEAIELFQEMLIDGGTEPNRVT 443

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFE-------SNHCIYNALISMYSRCANVEAAF 544
           F S+L   S +G +   EQ        G +        ++C    L+    R    E   
Sbjct: 444 FLSVLCACSHLGQL---EQAWEHFCSMGPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLL 500

Query: 545 QVFKEMEDRNVISWTSMITGFAKHG 569
              K+ E  +V+ W + ++    +G
Sbjct: 501 LRHKDFEA-DVVCWIAFLSACQMNG 524



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 81/154 (52%), Gaps = 3/154 (1%)

Query: 42  TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH 101
           TS   +  +  +  +G   +AI     M  +G  P   T   ++ SC       LGK +H
Sbjct: 300 TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIH 359

Query: 102 SLLTRS-KLEPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRG 159
           + +  S     + ++LN++I++Y KCG+L  A ++F+ +    R +V+W++MI +Y   G
Sbjct: 360 ARIRSSPSFSQSLMLLNAVITMYGKCGNLELAREVFECVPLRTRSVVTWTAMIRAYAQNG 419

Query: 160 KQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSN 192
              +AI +F EML + G  PN   F +V+ ACS+
Sbjct: 420 VGEEAIELFQEMLIDGGTEPNRVTFLSVLCACSH 453



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 77/176 (43%), Gaps = 5/176 (2%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           +ASLL     +  + K   +HA+I     + N  + N L+  YS+  ++  A   F  + 
Sbjct: 38  YASLLWQCRGLDEVRK---LHAQIAARKLDRNTFLGNVLVDAYSKHGSLHGAQLAFGRIT 94

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
             N  SW  ++  +A++G    A  +F+ M + G++PN +T    L AC+ A  ++ G K
Sbjct: 95  LHNAHSWNILMAAYAQNGHPRGAATLFHWMCSQGVRPNAVTLSTALLACTAARNLALGRK 154

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
               +     +       + ++ + GR   + EA       P   DV+ W   + A
Sbjct: 155 -LNELIASEALEIDSHVESSLITMYGRCREIEEAERAFDRSP-EKDVVCWTAMISA 208


>gi|225459736|ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  482 bits (1241), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/741 (36%), Positives = 398/741 (53%), Gaps = 76/741 (10%)

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
           S T +++     +  +LK G F+ D  +   L+  +   ++    A  V D + E N   
Sbjct: 24  STTASLSQTRQAHAHILKTGLFN-DTHLATKLLSHYAN-NMCFADATLVLDLVPEPNVFS 81

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           ++ +I   ++      A+  F  M+  G +PD   L   V AC+ L      +Q+H  A 
Sbjct: 82  FSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIAS 141

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
            +G   D  V  SLV MY KC     + D+ +VFDRM + +V+SW+A++  Y + G  D 
Sbjct: 142 VSGFDSDSFVQSSLVHMYIKCN---QIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVD- 197

Query: 371 EAVKLFSDMIQGQVAPN---------------------------HF--------TFASVL 395
           EA +LFS+M    V PN                           H         T +SVL
Sbjct: 198 EAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVL 257

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY---------------------- 433
            A G+L D  +   ++ + +K+G   D CV ++LI MY                      
Sbjct: 258 PAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVG 317

Query: 434 ---------ARSGRMEDARKAFESL----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                    +R+G++E + + F  L     E N+VS+ +M+   ++N    +A EL  E+
Sbjct: 318 SCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREM 377

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  GV  ++ T   LL    +I A+  G+  H   ++ G  ++  + +ALI MY++C  +
Sbjct: 378 QIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKCGRI 437

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           +A+   F  +  +N++ W ++I G+A HG A  A+EIF  M   G KP+ I++  VLSAC
Sbjct: 438 QASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSAC 497

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           S +GL  EG  +F SM  ++GI  R+EHYACMV LL R+G L +A   IR MP++ D  V
Sbjct: 498 SQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMIRRMPVNPDACV 557

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W   L +CRVH +  LG+ AAE + E +P +P  +ILLSN+YAS G W  V  +R  MK 
Sbjct: 558 WGALLSSCRVHNNVSLGEVAAEKLFELEPSNPGNYILLSNIYASKGMWNEVNRVRDMMKN 617

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           + L K  GCSWIE  NKVH    G+ SHP+  +I  +LD+L++++K+ GY P+ NFVL +
Sbjct: 618 KGLRKNPGCSWIEVKNKVHMLLAGDKSHPQMTQIIEKLDKLSMEMKKLGYFPEINFVLQD 677

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +EE+ K Q L  HSEK+AV FGL++T    P++V KNLR+CGDCH  IK+IS    REI 
Sbjct: 678 VEEQDKEQILCGHSEKLAVVFGLLNTPPGYPLQVIKNLRICGDCHVVIKFISSFERREIF 737

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD+NRFHH K+G CSC DYW
Sbjct: 738 VRDTNRFHHFKEGACSCGDYW 758



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 144/562 (25%), Positives = 264/562 (46%), Gaps = 75/562 (13%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKL--VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           LD+    + +C+ S    L +    H+ + ++ L  ++ +   L+S Y+      +A  +
Sbjct: 11  LDSVQHTIFNCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLV 70

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
              +  + ++ S+S++I ++    +   A+  F +ML  G  P+     + ++AC+    
Sbjct: 71  L-DLVPEPNVFSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSA 129

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +     ++G     G FDSD  V  +L+ M++K +  +  A++VFD+M E + V W+ ++
Sbjct: 130 LKPARQVHGIASVSG-FDSDSFVQSSLVHMYIKCN-QIRDAHRVFDRMFEPDVVSWSALV 187

Query: 256 TRCTQLGCPRDAIRLF-----------------------------------LDMILSGFL 280
               + GC  +A RLF                                   LDM L GF 
Sbjct: 188 AAYARQGCVDEAKRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMHLRGFE 247

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV------- 333
           PD  T+S V+ A  +LE    G  +H + I+ GL  D CV  +L+DMY KC+        
Sbjct: 248 PDGTTISSVLPAVGDLEDLVMGILIHGYVIKQGLVSDKCVSSALIDMYGKCSCTSEMSQV 307

Query: 334 ---------------------DGSVDDSRKVFDRMLDH----NVMSWTAIITGYVQSGGR 368
                                +G V+ S ++F ++ D     NV+SWT++I    Q+G R
Sbjct: 308 FDQMDHMDVGSCNAFIFGLSRNGQVESSLRLFRQLKDQGMELNVVSWTSMIACCSQNG-R 366

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           D EA++LF +M    V PN  T   +L ACGN+      +  +  +++RG + D  VG++
Sbjct: 367 DIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVYVGSA 426

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI MYA+ GR++ +R  F+ +  KNLV +N ++  YA +  +++A E+   ++ +G    
Sbjct: 427 LIDMYAKCGRIQASRICFDGIPTKNLVCWNAVIAGYAMHGKAKEAMEIFDLMQRSGQKPD 486

Query: 489 AYTFASLLSGASSIGAIGKGE-QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             +F  +LS  S  G   +G    ++   K G E+    Y  ++++ SR   +E A+ + 
Sbjct: 487 IISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAGKLEQAYAMI 546

Query: 548 KEME-DRNVISWTSMITGFAKH 568
           + M  + +   W ++++    H
Sbjct: 547 RRMPVNPDACVWGALLSSCRVH 568



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 219/453 (48%), Gaps = 80/453 (17%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+ T   M  +G  PD       +K+C         + VH + + S  + +S + +SL+ 
Sbjct: 98  ALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGIASVSGFDSDSFVQSSLVH 157

Query: 122 LYSKC-------------------------------GDLNEANKIFKSMGN---KRDIVS 147
           +Y KC                               G ++EA ++F  MG+   + +++S
Sbjct: 158 MYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEAKRLFSEMGDSGVQPNLIS 217

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W+ MI+ + + G   +A+ MF++M   GF P+    S+V+ A  + E++ +G +I+G+++
Sbjct: 218 WNGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVI 277

Query: 208 KCGYFDSDVCVGCALIDMFVKGSV------------------------------DLESAY 237
           K G   SD CV  ALIDM+ K S                                +ES+ 
Sbjct: 278 KQGLV-SDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSL 336

Query: 238 KVF----DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           ++F    D+  E N V WT MI  C+Q G   +A+ LF +M ++G  P+  T+  ++ AC
Sbjct: 337 RLFRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPAC 396

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             +     GK  H +++R G++ DV VG +L+DMYAKC   G +  SR  FD +   N++
Sbjct: 397 GNIAALMHGKAAHCFSLRRGISTDVYVGSALIDMYAKC---GRIQASRICFDGIPTKNLV 453

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ--VY 411
            W A+I GY    G+ KEA+++F  M +    P+  +F  VL AC     S + E+   Y
Sbjct: 454 CWNAVIAGYAMH-GKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQ---SGLTEEGSYY 509

Query: 412 THAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
            +++     ++  V +   ++++ +R+G++E A
Sbjct: 510 FNSMSSKYGIEARVEHYACMVTLLSRAGKLEQA 542



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 156/350 (44%), Gaps = 42/350 (12%)

Query: 48  NRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I   N  G   +A+     M  +G  PD  T S +L +     +  +G L+H  + +
Sbjct: 219 NGMIAGFNHSGLYSEAVLMFLDMHLRGFEPDGTTISSVLPAVGDLEDLVMGILIHGYVIK 278

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSM--------------------------- 139
             L  +  + ++LI +Y KC   +E +++F  M                           
Sbjct: 279 QGLVSDKCVSSALIDMYGKCSCTSEMSQVFDQMDHMDVGSCNAFIFGLSRNGQVESSLRL 338

Query: 140 -------GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
                  G + ++VSW+SMI+     G+ ++A+ +F EM   G  PN      ++ AC N
Sbjct: 339 FRQLKDQGMELNVVSWTSMIACCSQNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGN 398

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
              +  G   + F L+ G   +DV VG ALIDM+ K    ++++   FD +  KN V W 
Sbjct: 399 IAALMHGKAAHCFSLRRG-ISTDVYVGSALIDMYAKCG-RIQASRICFDGIPTKNLVCWN 456

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK-QLHSWAIR 311
            +I      G  ++A+ +F  M  SG  PD  + + V+SACS+  L   G    +S + +
Sbjct: 457 AVIAGYAMHGKAKEAMEIFDLMQRSGQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSK 516

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIIT 360
            G+   V     +V + ++    G ++ +  +  RM ++ +   W A+++
Sbjct: 517 YGIEARVEHYACMVTLLSRA---GKLEQAYAMIRRMPVNPDACVWGALLS 563



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 111/223 (49%), Gaps = 5/223 (2%)

Query: 400 NLLDSNVA-----EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           N L+S  A      Q + H +K G   D  +   L+S YA +    DA    + + E N+
Sbjct: 20  NCLNSTTASLSQTRQAHAHILKTGLFNDTHLATKLLSHYANNMCFADATLVLDLVPEPNV 79

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
            S++T++ A++K      A     ++   G+        S +   + + A+    Q+H  
Sbjct: 80  FSFSTLIYAFSKFHQFHHALSTFSQMLTRGLMPDNRVLPSAVKACAGLSALKPARQVHGI 139

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
              SGF+S+  + ++L+ MY +C  +  A +VF  M + +V+SW++++  +A+ G    A
Sbjct: 140 ASVSGFDSDSFVQSSLVHMYIKCNQIRDAHRVFDRMFEPDVVSWSALVAAYARQGCVDEA 199

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
             +F +M   G++PN I++  +++  +H+GL SE    F  M+
Sbjct: 200 KRLFSEMGDSGVQPNLISWNGMIAGFNHSGLYSEAVLMFLDMH 242



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 89/205 (43%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +GR  +A+     M   G  P+  T   LL +C        GK  H    R  +  +  
Sbjct: 363 QNGRDIEALELFREMQIAGVKPNSVTIPCLLPACGNIAALMHGKAAHCFSLRRGISTDVY 422

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++LI +Y+KCG +  +   F  +  K ++V W+++I+ Y   GK  +A+ +F  M   
Sbjct: 423 VGSALIDMYAKCGRIQASRICFDGIPTK-NLVCWNAVIAGYAMHGKAKEAMEIFDLMQRS 481

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+   F+ V+ ACS +     G   +  +      ++ V     ++ +  +    LE
Sbjct: 482 GQKPDIISFTCVLSACSQSGLTEEGSYYFNSMSSKYGIEARVEHYACMVTLLSRAG-KLE 540

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRC 258
            AY +  +M    +   W  +++ C
Sbjct: 541 QAYAMIRRMPVNPDACVWGALLSSC 565


>gi|297831082|ref|XP_002883423.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329263|gb|EFH59682.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 679

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 234/629 (37%), Positives = 376/629 (59%), Gaps = 4/629 (0%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF  +     + W  +I   T       A+  F++M  SG  PD      V+ +
Sbjct: 55  LHEALLVFKTLESPPVLAWKSVIRCFTDQSLFSRALASFVEMRASGRCPDHNVFPSVLKS 114

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ +     G+ +H + +R G+  D+  G +L++MY+K      +D  RKVF+ M   +V
Sbjct: 115 CTMMMDLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLL---GIDSVRKVFELMPRKDV 171

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +S+  +I GY QSG  + +A+++  +M    + P+ FT +SVL      +D    ++++ 
Sbjct: 172 VSYNTVIAGYAQSGMYE-DALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHG 230

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + +++G   D  +G+SL+ MYA+S R+ED+ + F  L+ ++ +S+N++V  Y +N    +
Sbjct: 231 YVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNE 290

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  L  ++    V   A  F+S++   + +  +  G+Q+H  +++ GF  N  I +AL+ 
Sbjct: 291 ALRLFRQMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVD 350

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MYS+C N++AA ++F  M   + +SWT++I G A HG    A+ +F +M   G+KPN + 
Sbjct: 351 MYSKCGNIQAARKIFDRMNLHDEVSWTAIIMGHALHGHGHEAVSLFEEMKRQGVKPNQVA 410

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++AVL+ACSH GL+ E W +F SM   +G+ Q +EHYA + DLLGR+G L EA +FI  M
Sbjct: 411 FVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAGKLEEAYDFISKM 470

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
            +     VW T L +C VH + EL +  AE I   D ++  A++L+ N+YAS G W+ +A
Sbjct: 471 RVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMGAYVLMCNMYASNGRWKEMA 530

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R R++++ L K+  CSWIE  NK H F  G+ SHP    I   L  +  ++++ GY+ 
Sbjct: 531 KLRLRVRKKGLRKKPACSWIEMKNKTHGFVSGDRSHPSMDRINEFLKAVMEQMEKEGYVA 590

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           DT+ VLH+++EE K + LF HSE++AVAFG+I+T     IRV KN+R+C DCH AIK+IS
Sbjct: 591 DTSGVLHDVDEEHKRELLFGHSERLAVAFGIINTEPGTTIRVTKNIRICTDCHVAIKFIS 650

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +T REI++RD++RFHH   G CSC DYW
Sbjct: 651 KITEREIIVRDNSRFHHFNRGSCSCGDYW 679



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 242/467 (51%), Gaps = 35/467 (7%)

Query: 33  SPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSR 92
           SPP +A  +     +++ ++        +A+ +   M   G  PD + +  +LKSC    
Sbjct: 67  SPPVLAWKSVIRCFTDQSLF-------SRALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
           +   G+ VH  + R  ++ +    N+L+++YSK   ++   K+F+ M  K D+VS++++I
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYSKLLGIDSVRKVFELMPRK-DVVSYNTVI 178

Query: 153 SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
           + Y   G   DA+ M  EM      P+ +  S+V+   S   +V  G  I+G++++ G  
Sbjct: 179 AGYAQSGMYEDALRMVREMGTSDLKPDAFTLSSVLPIFSEYVDVLKGKEIHGYVIRKG-I 237

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           DSDV +G +L+DM+ K S  +E + +VF  +  ++++ W  ++    Q G   +A+RLF 
Sbjct: 238 DSDVYIGSSLVDMYAK-SARIEDSERVFSHLYRRDSISWNSLVAGYVQNGRYNEALRLFR 296

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M+ +   P     S V+ AC+ L     GKQLH + +R G   ++ +  +LVDMY+KC 
Sbjct: 297 QMVSAKVRPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGRNIFIASALVDMYSKC- 355

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G++  +RK+FDRM  H+ +SWTAII G+    G   EAV LF +M +  V PN   F 
Sbjct: 356 --GNIQAARKIFDRMNLHDEVSWTAIIMGHALH-GHGHEAVSLFEEMKRQGVKPNQVAFV 412

Query: 393 SVLKACGN--LLDS-----NVAEQVY--THAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           +VL AC +  L+D      N   +VY     ++   A+ D +G        R+G++E+A 
Sbjct: 413 AVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLG--------RAGKLEEAY 464

Query: 444 KAFESL-FEKNLVSYNTMVDAYA--KNLN-SEKAFELLHEIEDTGVG 486
                +  E     ++T++ + +  KNL  +EK  E +  I+   +G
Sbjct: 465 DFISKMRVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFTIDSENMG 511



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 56/261 (21%), Positives = 124/261 (47%), Gaps = 3/261 (1%)

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           A+Q++   + R ++L     + +IS+Y     + +A   F++L    ++++ +++  +  
Sbjct: 24  AKQLHAQFI-RTQSLSHTSASIVISIYTNLKLLHEALLVFKTLESPPVLAWKSVIRCFTD 82

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
                +A     E+  +G       F S+L   + +  +  GE +H  I++ G + +   
Sbjct: 83  QSLFSRALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            NAL++MYS+   +++  +VF+ M  ++V+S+ ++I G+A+ G    AL +  +M    +
Sbjct: 143 GNALMNMYSKLLGIDSVRKVFELMPRKDVVSYNTVIAGYAQSGMYEDALRMVREMGTSDL 202

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+  T  +VL   S    + +G K         GI   +   + +VD+  +S  + ++ 
Sbjct: 203 KPDAFTLSSVLPIFSEYVDVLKG-KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS- 260

Query: 647 EFIRSMPLSADVLVWRTFLGA 667
           E + S     D + W + +  
Sbjct: 261 ERVFSHLYRRDSISWNSLVAG 281


>gi|356515406|ref|XP_003526391.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Glycine max]
          Length = 647

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 241/591 (40%), Positives = 375/591 (63%), Gaps = 6/591 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD+I  G L PDR   + ++  C++L     GK +H   + +    D+ +  SL+ MYA+
Sbjct: 62  LDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSLLFMYAR 121

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GS++ +R++FD M   +++SWT++ITGY Q+  R  +A+ LF  M+     PN FT
Sbjct: 122 C---GSLEGARRLFDEMPHRDMVSWTSMITGYAQND-RASDALLLFPRMLSDGAEPNEFT 177

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
            +S++K CG +   N   Q++    K G   +  VG+SL+ MYAR G + +A   F+ L 
Sbjct: 178 LSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAMLVFDKLG 237

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            KN VS+N ++  YA+    E+A  L   ++  G   + +T+++LLS  SS+G + +G+ 
Sbjct: 238 CKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLEQGKW 297

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA ++KS  +    + N L+ MY++  ++  A +VF ++   +V+S  SM+ G+A+HG 
Sbjct: 298 LHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGL 357

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A + F +M+  GI+PN IT+++VL+ACSHA L+ EG KH+  +  ++ I  ++ HYA
Sbjct: 358 GKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEG-KHYFGLMRKYNIEPKVSHYA 416

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
            +VDLLGR+G L +A  FI  MP+   V +W   LGA ++H +TE+G +AA+ + E DP 
Sbjct: 417 TIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGAYAAQRVFELDPS 476

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
            P  H LL+N+YASAG WE VA +RK MK+  + KE  CSW+E +N VH F   + +HP+
Sbjct: 477 YPGTHTLLANIYASAGRWEDVAKVRKIMKDSGVKKEPACSWVEVENSVHVFVANDVAHPQ 536

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             +I+   ++L  KIKE GY+PDT+ VL  +++++K   L  HSEK+A++F L++T    
Sbjct: 537 KEKIHKMWEKLNQKIKEIGYVPDTSHVLLFVDQQEKELNLQYHSEKLALSFALLNTPPGS 596

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IR+ KN+RVCGDCH+AIKY+S+V  REI++RD+NRFHH  DG CSC DYW
Sbjct: 597 TIRIMKNIRVCGDCHSAIKYVSLVVKREIIVRDTNRFHHFCDGFCSCGDYW 647



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/436 (32%), Positives = 231/436 (52%), Gaps = 19/436 (4%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           +  +  LDL+      PD   Y+ LLK C +      GKLVH  +  S  + + VI NSL
Sbjct: 56  KTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVIQNSL 115

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + +Y++CG L  A ++F  M + RD+VSW+SMI+ Y    +  DA+ +F  ML  G  PN
Sbjct: 116 LFMYARCGSLEGARRLFDEMPH-RDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPN 174

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           E+  S++++ C    +   G  I+    K G   S+V VG +L+DM+ +    L  A  V
Sbjct: 175 EFTLSSLVKCCGYMASYNCGRQIHACCWKYG-CHSNVFVGSSLVDMYARCGY-LGEAMLV 232

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FDK+  KN V W  +I    + G   +A+ LF+ M   G+ P  FT S ++S+CS +   
Sbjct: 233 FDKLGCKNEVSWNALIAGYARKGEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCL 292

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GK LH+  +++   L   VG +L+ MYAK    GS+ D+ KVFD+++  +V+S  +++
Sbjct: 293 EQGKWLHAHLMKSSQKLVGYVGNTLLHMYAK---SGSIRDAEKVFDKLVKVDVVSCNSML 349

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKR 417
            GY Q  G  KEA + F +MI+  + PN  TF SVL AC +  LLD    E  +   + R
Sbjct: 350 IGYAQH-GLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLD----EGKHYFGLMR 404

Query: 418 GRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEK-- 472
              ++  V +  +++ +  R+G ++ A+   E +  E  +  +  ++ A   + N+E   
Sbjct: 405 KYNIEPKVSHYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMHKNTEMGA 464

Query: 473 -AFELLHEIEDTGVGT 487
            A + + E++ +  GT
Sbjct: 465 YAAQRVFELDPSYPGT 480



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 125/464 (26%), Positives = 240/464 (51%), Gaps = 13/464 (2%)

Query: 108 KLEPNSVILNSLISLYSKCG-DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           + E +S +L SL+ + S C  DL    ++++   +   ++   +++   +N       +H
Sbjct: 4   QCERSSSVLKSLLQIVSPCKRDLGSFRRLWQHSESTFCVIDDRNLLRPSLNSKT---GLH 60

Query: 167 MFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
           + +++++ G   P+   ++ +++ C+    +  G +++  +L    F  D+ +  +L+ M
Sbjct: 61  V-LDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSN-FKHDLVIQNSLLFM 118

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           + +    LE A ++FD+M  ++ V WT MIT   Q     DA+ LF  M+  G  P+ FT
Sbjct: 119 YARCG-SLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGAEPNEFT 177

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           LS +V  C  +  +  G+Q+H+   + G   +V VG SLVDMYA+C   G + ++  VFD
Sbjct: 178 LSSLVKCCGYMASYNCGRQIHACCWKYGCHSNVFVGSSLVDMYARC---GYLGEAMLVFD 234

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           ++   N +SW A+I GY +  G  +EA+ LF  M +    P  FT++++L +C ++    
Sbjct: 235 KLGCKNEVSWNALIAGYARK-GEGEEALALFVRMQREGYRPTEFTYSALLSSCSSMGCLE 293

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             + ++ H +K  + L   VGN+L+ MYA+SG + DA K F+ L + ++VS N+M+  YA
Sbjct: 294 QGKWLHAHLMKSSQKLVGYVGNTLLHMYAKSGSIRDAEKVFDKLVKVDVVSCNSMLIGYA 353

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           ++   ++A +   E+   G+  +  TF S+L+  S    + +G+     + K   E    
Sbjct: 354 QHGLGKEAAQQFDEMIRFGIEPNDITFLSVLTACSHARLLDEGKHYFGLMRKYNIEPKVS 413

Query: 526 IYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            Y  ++ +  R   ++ A    +EM  +  V  W +++     H
Sbjct: 414 HYATIVDLLGRAGLLDQAKSFIEEMPIEPTVAIWGALLGASKMH 457



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/314 (28%), Positives = 155/314 (49%), Gaps = 18/314 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y  ND R   A+     M   G  P+  T S L+K C    +++ G+ +H+   +     
Sbjct: 150 YAQND-RASDALLLFPRMLSDGAEPNEFTLSSLVKCCGYMASYNCGRQIHACCWKYGCHS 208

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N  + +SL+ +Y++CG L EA  +F  +G K + VSW+++I+ Y  +G+  +A+ +FV M
Sbjct: 209 NVFVGSSLVDMYARCGYLGEAMLVFDKLGCKNE-VSWNALIAGYARKGEGEEALALFVRM 267

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-----CGYFDSDVCVGCALIDMF 226
              G+ P E+ +SA++ +CS+   +  G  ++  L+K      GY      VG  L+ M+
Sbjct: 268 QREGYRPTEFTYSALLSSCSSMGCLEQGKWLHAHLMKSSQKLVGY------VGNTLLHMY 321

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K S  +  A KVFDK+ + + V    M+    Q G  ++A + F +MI  G  P+  T 
Sbjct: 322 AK-SGSIRDAEKVFDKLVKVDVVSCNSMLIGYAQHGLGKEAAQQFDEMIRFGIEPNDITF 380

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
             V++ACS   L   GK       +  +   V    ++VD+  +    G +D ++   + 
Sbjct: 381 LSVLTACSHARLLDEGKHYFGLMRKYNIEPKVSHYATIVDLLGRA---GLLDQAKSFIEE 437

Query: 347 M-LDHNVMSWTAII 359
           M ++  V  W A++
Sbjct: 438 MPIEPTVAIWGALL 451



 Score =  102 bits (255), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/209 (28%), Positives = 112/209 (53%), Gaps = 2/209 (0%)

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           +LNS+    +L  I+   +      + +LL   + +G + +G+ +H  ++ S F+ +  I
Sbjct: 52  SLNSKTGLHVLDLIDCGSLEPDRTLYNTLLKRCTQLGKLKEGKLVHFHVLNSNFKHDLVI 111

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            N+L+ MY+RC ++E A ++F EM  R+++SWTSMITG+A++  A+ AL +F +ML+DG 
Sbjct: 112 QNSLLFMYARCGSLEGARRLFDEMPHRDMVSWTSMITGYAQNDRASDALLLFPRMLSDGA 171

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +PN  T  +++  C +    + G +   +   ++G    +   + +VD+  R G L EA+
Sbjct: 172 EPNEFTLSSLVKCCGYMASYNCG-RQIHACCWKYGCHSNVFVGSSLVDMYARCGYLGEAM 230

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTE 675
                +    +V  W   +      G+ E
Sbjct: 231 LVFDKLGCKNEV-SWNALIAGYARKGEGE 258


>gi|225445812|ref|XP_002275298.1| PREDICTED: pentatricopeptide repeat-containing protein At4g30700
           [Vitis vinifera]
          Length = 781

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 269/786 (34%), Positives = 440/786 (55%), Gaps = 17/786 (2%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T +L L    R    H     H+ +  + L  + V +  L    S    +++A+ +F ++
Sbjct: 9   TRNLFLTLINRVSTLHQLNQTHAQIILNGLHNDLVTVTKLTHKLSHLKAIDQASLLFSTI 68

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENVAI 198
            N  D+  ++ +I ++        A+ ++  + +     P+ + ++ VI   S+     +
Sbjct: 69  PNP-DLFLYNVLIRAFSLNNSPSSAVSLYTHLRKSTPLEPDNFTYAFVISGASSLGLGLL 127

Query: 199 G---HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
                I+ GF        SD+ VG A++  + K S  + +A KVFD M E++TV W  M+
Sbjct: 128 LHAHSIVAGF-------GSDLFVGSAIVACYFKFS-RVAAARKVFDGMLERDTVLWNTMV 179

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +   +  C  +AI +F DM+  G   D  T++ V+   +EL+    G  +   A++ G  
Sbjct: 180 SGLVKNSCFDEAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFH 239

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
               V   L  +Y+KC   G ++ +R +F ++   +++S+ A+I+GY       + +V+L
Sbjct: 240 SHAYVITGLACLYSKC---GEIETARLLFGQIGQPDLVSYNAMISGYT-CNNETESSVRL 295

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F +++      N  +   ++         ++   ++    K G   +  V  +L ++Y+R
Sbjct: 296 FKELLVSGEKVNSSSIVGLIPVFFPFGHLHLTRCIHGFCTKSGVVSNSSVSTALTTVYSR 355

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
              +E AR  F+   EK+L S+N M+  YA+N  +EKA  L  E++   V  +  T  S+
Sbjct: 356 LNEIESARLLFDESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSI 415

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           LS  + +GA+  G+ +H  I +  FESN  +  ALI MY++C ++  A ++F  M ++N 
Sbjct: 416 LSACAQLGALSLGKWVHDLINRESFESNIFVSTALIDMYAKCGSITEAQRLFSMMPEKNA 475

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           ++W +MI+G+  HG+   AL +F +ML   + P G+T+++VL ACSHAGL+ EG + FRS
Sbjct: 476 VTWNAMISGYGLHGYGHEALNLFNEMLHSRVSPTGVTFLSVLYACSHAGLVREGDEIFRS 535

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M  +HG     EHYACMVDLLGR+G+L +AL+FIR MP+     VW   LGAC +H D  
Sbjct: 536 MVHDHGFEPLPEHYACMVDLLGRAGNLDKALDFIRKMPVEPGPPVWGALLGACMIHKDAN 595

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           L + A++ + E DPQ+   ++LLSN+Y++  ++   A++R  +K R L K  GC+ IE  
Sbjct: 596 LARLASDKLFELDPQNVGYYVLLSNIYSAGQNYPEAASVRGVVKRRKLAKTPGCTLIEVA 655

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           N +H F  G+ SHP+   IYA L++L  K++E G+  +T   LH++EEE+K   +  HSE
Sbjct: 656 NTLHIFTSGDQSHPQATAIYAMLEKLTGKMREAGFQTETGTALHDVEEEEKELMVKVHSE 715

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           K+A+AFGLI++     IR+ KNLRVC DCH A K+IS +T R IV+RD+NRFHH KDG C
Sbjct: 716 KLAIAFGLITSEPGTEIRIIKNLRVCLDCHNATKFISKITERVIVVRDANRFHHFKDGIC 775

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 776 SCGDYW 781



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/338 (29%), Positives = 175/338 (51%), Gaps = 7/338 (2%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +AI     M + G   D  T + +L      ++  LG  +  L  +     ++ ++  L 
Sbjct: 190 EAILIFGDMVKGGIGFDSTTVAAVLPGVAELQDLALGMGIQCLAMKVGFHSHAYVITGLA 249

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            LYSKCG++  A  +F  +G + D+VS+++MIS Y    +   ++ +F E+L  G   N 
Sbjct: 250 CLYSKCGEIETARLLFGQIG-QPDLVSYNAMISGYTCNNETESSVRLFKELLVSGEKVNS 308

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
                +I       ++ +   I+GF  K     S+  V  AL  ++ + + ++ESA  +F
Sbjct: 309 SSIVGLIPVFFPFGHLHLTRCIHGFCTK-SGVVSNSSVSTALTTVYSRLN-EIESARLLF 366

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+ +EK+   W  MI+   Q G    AI LF +M      P+  T++ ++SAC++L   +
Sbjct: 367 DESSEKSLASWNAMISGYAQNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALS 426

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            GK +H    R     ++ V  +L+DMYAKC   GS+ +++++F  M + N ++W A+I+
Sbjct: 427 LGKWVHDLINRESFESNIFVSTALIDMYAKC---GSITEAQRLFSMMPEKNAVTWNAMIS 483

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           GY    G   EA+ LF++M+  +V+P   TF SVL AC
Sbjct: 484 GYGLH-GYGHEALNLFNEMLHSRVSPTGVTFLSVLYAC 520



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  +KAI     M +    P+  T + +L +C +     LGK VH L+ R   E N  
Sbjct: 386 QNGLTEKAISLFQEMQKCEVRPNPVTVTSILSACAQLGALSLGKWVHDLINRESFESNIF 445

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +LI +Y+KCG + EA ++F SM  +++ V+W++MIS Y   G   +A+++F EML  
Sbjct: 446 VSTALIDMYAKCGSITEAQRLF-SMMPEKNAVTWNAMISGYGLHGYGHEALNLFNEMLHS 504

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P    F +V+ ACS+   V  G  I+  ++    F+        ++D+  +   +L+
Sbjct: 505 RVSPTGVTFLSVLYACSHAGLVREGDEIFRSMVHDHGFEPLPEHYACMVDLLGRAG-NLD 563

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRC 258
            A     KM  E     W  ++  C
Sbjct: 564 KALDFIRKMPVEPGPPVWGALLGAC 588


>gi|449527343|ref|XP_004170671.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g24000, mitochondrial-like [Cucumis sativus]
          Length = 677

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 256/660 (38%), Positives = 402/660 (60%), Gaps = 17/660 (2%)

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           L C  F +     CA ++     S D +     F  + +   +   L  T  +  G   +
Sbjct: 30  LSCFLFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDL---LRTTHISSSGTSSN 86

Query: 267 AIRLF-LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           +  L+ LD+I  G L P+R   S +++ C+ L     G+ +H+    +    D+ +   +
Sbjct: 87  STGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFI 146

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           ++MYAKC   GS+++++ +FD+M   +++SWT +I+GY QSG +  EA+ LF  M+    
Sbjct: 147 LNMYAKC---GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSG-QASEALALFPKMLHLGF 202

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            PN FT +S+LKA G     +   Q++  ++K G  ++  VG+SL+ MYAR   M +A+ 
Sbjct: 203 QPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKV 262

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F SL  KN+VS+N ++  +A+    E    L  ++   G   + +T++S+L+ ASS G+
Sbjct: 263 IFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVLACASS-GS 321

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           + +G+ +HA +IKSG +    I N LI MY++  +++ A +VF+ +  ++++SW S+I+G
Sbjct: 322 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 381

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +A+HG  A AL++F +ML   ++PN IT+++VL+ACSH+GL+ EG  +F  M  +H I  
Sbjct: 382 YAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEA 440

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           ++ H+  +VDLLGR+G L EA +FI  MP+     VW   LGACR+H + +LG +AAE I
Sbjct: 441 QVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQI 500

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
            E DP D   H+LLSN+YASAG     A +RK MKE  + KE  CSW+E +N+VH F   
Sbjct: 501 FELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVAN 560

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTN---FVLHELEEEQKVQYLFQHSEKIAVAF 801
           + SHP   EI    ++++ KIKE GY+PDT+   F +++ + E K+QY   HSEK+A+AF
Sbjct: 561 DDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQY---HSEKLALAF 617

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            ++ T     IR+ KN+R+CGDCH+A K+ S V GREI++RD+NRFHH   G CSC DYW
Sbjct: 618 AVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 677



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 263/512 (51%), Gaps = 27/512 (5%)

Query: 10  AKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLM 69
           AK   P +F  SN +        + PF       + L    I           ++ LDL+
Sbjct: 37  AKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLI 96

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
                 P+   YS +L  C   R    G+ +H+ +  S  E + V+LN ++++Y+KCG L
Sbjct: 97  NCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL 156

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
            EA  +F  M  K D+VSW+ +IS Y   G+  +A+ +F +ML LGF PNE+  S++++A
Sbjct: 157 EEAQDLFDKMPTK-DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
                +   G  ++ F LK GY D +V VG +L+DM+ + +  +  A  +F+ +  KN V
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGY-DMNVHVGSSLLDMYARWA-HMREAKVIFNSLAAKNVV 273

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  +I    + G     +RLF  M+  GF P  FT S V+ AC+       GK +H+  
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFXQMLRQGFEPTHFTYSSVL-ACASSGSLEQGKWVHAHV 332

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I++G      +G +L+DMYAK    GS+ D++KVF R++  +++SW +II+GY Q  G  
Sbjct: 333 IKSGGQPIAYIGNTLIDMYAK---SGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH-GLG 388

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN 427
            EA++LF  M++ +V PN  TF SVL AC +  LLD     Q Y   +K+ +       +
Sbjct: 389 AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG---QYYFELMKKHKIEAQVAHH 445

Query: 428 -SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN-----SEKAFELLH 478
            +++ +  R+GR+ +A K  E +  +     +  ++ A    KN++     +E+ FEL  
Sbjct: 446 VTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGACRMHKNMDLGVYAAEQIFEL-- 503

Query: 479 EIEDTG---VGTSAYTFASLLSGASSIGAIGK 507
           +  D+G   + ++ Y  A  LS A+ +  + K
Sbjct: 504 DPHDSGPHVLLSNIYASAGRLSDAAKVRKMMK 535


>gi|188509964|gb|ACD56648.1| putative pentatricopeptide repeat protein [Gossypioides kirkii]
          Length = 805

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 264/814 (32%), Positives = 444/814 (54%), Gaps = 81/814 (9%)

Query: 49  RLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           ++++    G ++ A+  L  M QK +  +  TYS +L+ C  S++   GK VHS++  + 
Sbjct: 72  KILHFCQLGNLENAM-ELVCMCQK-SELETKTYSSVLQLCAGSKSLTDGKKVHSIIKSNN 129

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           +  + V+   L+SLY+ CGDL E  ++F +M  K+++  W+ M+S               
Sbjct: 130 VAVDEVLGLKLVSLYATCGDLKEGRRVFDTM-EKKNVYLWNFMVS--------------- 173

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
                      EY                          K G F   +C+   +++  ++
Sbjct: 174 -----------EYA-------------------------KIGDFKESICLFKIMVEKGIE 197

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G    ESA ++FDK+ +++ + W  MI+     G     + ++  M+  G   D  T+  
Sbjct: 198 GKRP-ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLEIYKQMMYLGIDVDLATIIS 256

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+  C+     + GK +HS AI++     +    +L+DMY+KC   G +D + +VF++M 
Sbjct: 257 VLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMYSKC---GDLDGALRVFEKMG 313

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV+SWT++I GY + G R   A++L   M +  V  +     S+L AC      +  +
Sbjct: 314 ERNVVSWTSMIAGYTRDG-RSDGAIRLLQQMEKEGVKLDVVATTSILHACARSGSLDNGK 372

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+ +        +  V N+L+ MY + G M+ A   F ++  K+++S+NTM+     + 
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSVFSTMVVKDIISWNTMIGELKPD- 431

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
                               + T A +L   +S+ A+ +G++IH  I+++G+ S+  + N
Sbjct: 432 --------------------SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 471

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ +Y +C  +  A  +F  +  ++++SWT MI+G+  HG+   A+  F +M   GI+P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMISGYGMHGYGNEAIATFNEMRDAGIEP 531

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + +++I++L ACSH+GL+ +GW+ F  M ++  I  ++EHYACMVDLL R+G+L++A EF
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEF 591

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I ++P++ D  +W   L  CR++ D EL +  AE + E +P++   ++LL+N+YA A  W
Sbjct: 592 IETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKW 651

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG-ETSHPKTLEIYAELDQLALKIKE 767
           E V  +R+++ ++ L K  GCSWIE   KV+ F  G  +SHP + +I + L ++  K+KE
Sbjct: 652 EEVKRMREKIGKKGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKKIESLLKKMRRKMKE 711

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY P T + L   +E QK   L  HSEK+A+AFGL++    K +RV KNLRVCGDCH  
Sbjct: 712 EGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLALPPRKTVRVTKNLRVCGDCHEM 771

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K++S  T REIVLRDSNRFHH K+G CSC  +W
Sbjct: 772 AKFMSKETRREIVLRDSNRFHHFKNGYCSCRGFW 805



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 91/378 (24%), Positives = 176/378 (46%), Gaps = 68/378 (17%)

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           R +D  V  + A I  + Q G  +  A++L     + ++     T++SVL+ C       
Sbjct: 60  RTIDRQVTDYNAKILHFCQLGNLEN-AMELVCMCQKSELETK--TYSSVLQLCAGSKSLT 116

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN------------ 453
             ++V++       A+D+ +G  L+S+YA  G +++ R+ F+++ +KN            
Sbjct: 117 DGKKVHSIIKSNNVAVDEVLGLKLVSLYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176

Query: 454 ---------------------------------------LVSYNTMVDAYAKNLNSEKAF 474
                                                  ++S+N+M+  Y  N  +E+  
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGL 236

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           E+  ++   G+     T  S+L G ++ G +  G+ +H+  IKS FE      N L+ MY
Sbjct: 237 EIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSTFERRINFSNTLLDMY 296

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S+C +++ A +VF++M +RNV+SWTSMI G+ + G +  A+ +  +M  +G+K + +   
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIRLLQQMEKEGVKLDVVATT 356

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQ--RMEH--YAC--MVDLLGRSGSLTEALEF 648
           ++L AC+ +G +  G        D H  ++   ME   + C  ++D+  + GS+  A   
Sbjct: 357 SILHACARSGSLDNG-------KDVHDYIKANNMESNLFVCNALMDMYTKCGSMDGANSV 409

Query: 649 IRSMPLSADVLVWRTFLG 666
             +M +  D++ W T +G
Sbjct: 410 FSTMVVK-DIISWNTMIG 426


>gi|356503988|ref|XP_003520781.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic-like [Glycine max]
          Length = 771

 Score =  482 bits (1240), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 244/617 (39%), Positives = 373/617 (60%), Gaps = 11/617 (1%)

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           N V WT +I + ++   P  A+  F  M  +G  P+ FT S ++ AC+   L + G+Q+H
Sbjct: 164 NVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEGQQIH 223

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           +   +     D  V  +L+DMYAKC   GS+  +  VFD M   N++SW ++I G+V++ 
Sbjct: 224 ALIHKHCFLNDPFVATALLDMYAKC---GSMLLAENVFDEMPHRNLVSWNSMIVGFVKNK 280

Query: 367 --GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
             GR   A+ +F +++   + P+  + +SVL AC  L++ +  +QV+   VKRG      
Sbjct: 281 LYGR---AIGVFREVLS--LGPDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGLVY 335

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V NSL+ MY + G  EDA K F    ++++V++N M+    +  N E+A      +   G
Sbjct: 336 VKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIREG 395

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V     +++SL   ++SI A+ +G  IH+ ++K+G   N  I ++L++MY +C ++  A+
Sbjct: 396 VEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKCGSMLDAY 455

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           QVF+E ++ NV+ WT+MIT F +HG A  A+++F +ML +G+ P  IT+++VLSACSH G
Sbjct: 456 QVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITFVSVLSACSHTG 515

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            I +G+K+F SM + H I   +EHYACMVDLLGR G L EA  FI SMP   D LVW   
Sbjct: 516 KIDDGFKYFNSMANVHNIKPGLEHYACMVDLLGRVGRLEEACRFIESMPFEPDSLVWGAL 575

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           LGAC  H + E+G+  AE + + +P +P  ++LLSN+Y   G  E    +R+ M    + 
Sbjct: 576 LGACGKHANVEMGREVAERLFKLEPDNPGNYMLLSNIYIRHGMLEEADEVRRLMGINGVR 635

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           KE+GCSWI+  N+   F+  + SH +T EIY  L +L   IK  GY+ +T F  + +E  
Sbjct: 636 KESGCSWIDVKNRTFVFNANDRSHSRTQEIYGMLQKLKELIKRRGYVAETQFATNSVEGS 695

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           ++ Q L+ HSEK+A+AFGL+      P+R+ KNLR CGDCHT +K+ S +  REI++RD 
Sbjct: 696 EE-QSLWCHSEKLALAFGLLVLPPGSPVRIKKNLRTCGDCHTVMKFASEIFQREIIVRDI 754

Query: 845 NRFHHIKDGKCSCNDYW 861
           NRFH   +G CSC DYW
Sbjct: 755 NRFHRFTNGSCSCMDYW 771



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 253/516 (49%), Gaps = 26/516 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PDL     LL +  + ++      +HS L  +    +   +N+L+ LY+KCG ++    +
Sbjct: 98  PDLKH---LLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKCGSIHHTLLL 154

Query: 136 FKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           F +  +   ++V+W+++I+      K   A+  F  M   G  PN + FSA++ AC++  
Sbjct: 155 FNTYPHPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAA 214

Query: 195 NVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWT 252
            ++ G  I+  + K C  F +D  V  AL+DM+ K GS+ L  A  VFD+M  +N V W 
Sbjct: 215 LLSEGQQIHALIHKHC--FLNDPFVATALLDMYAKCGSMLL--AENVFDEMPHRNLVSWN 270

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            MI    +      AI +F +++  G  PD+ ++S V+SAC+ L     GKQ+H   ++ 
Sbjct: 271 SMIVGFVKNKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKR 328

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           GL   V V  SLVDMY KC   G  +D+ K+F    D +V++W  +I G  +    + +A
Sbjct: 329 GLVGLVYVKNSLVDMYCKC---GLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFE-QA 384

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
              F  MI+  V P+  +++S+  A  ++        +++H +K G   +  + +SL++M
Sbjct: 385 CTYFQAMIREGVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTM 444

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y + G M DA + F    E N+V +  M+  + ++  + +A +L  E+ + GV     TF
Sbjct: 445 YGKCGSMLDAYQVFRETKEHNVVCWTAMITVFHQHGCANEAIKLFEEMLNEGVVPEYITF 504

Query: 493 ASLLSGASSIGAIGKG-----EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
            S+LS  S  G I  G        +   IK G E     Y  ++ +  R   +E A +  
Sbjct: 505 VSVLSACSHTGKIDDGFKYFNSMANVHNIKPGLEH----YACMVDLLGRVGRLEEACRFI 560

Query: 548 KEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
           + M  + + + W +++    KH       E+  ++ 
Sbjct: 561 ESMPFEPDSLVWGALLGACGKHANVEMGREVAERLF 596



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 225/445 (50%), Gaps = 20/445 (4%)

Query: 39  QPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG 97
            P+T+      LI  L+   +  +A+   + M   G +P+  T+S +L +C  +     G
Sbjct: 160 HPSTNVVTWTTLINQLSRSNKPFQALTFFNRMRTTGIYPNHFTFSAILPACAHAALLSEG 219

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           + +H+L+ +     +  +  +L+ +Y+KCG +  A  +F  M + R++VSW+SMI  +V 
Sbjct: 220 QQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPH-RNLVSWNSMIVGFVK 278

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                 AI +F E+L LG  P++   S+V+ AC+    +  G  ++G ++K G     V 
Sbjct: 279 NKLYGRAIGVFREVLSLG--PDQVSISSVLSACAGLVELDFGKQVHGSIVKRGLVGL-VY 335

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V  +L+DM+ K  +  E A K+F    +++ V W +MI  C +      A   F  MI  
Sbjct: 336 VKNSLVDMYCKCGL-FEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTYFQAMIRE 394

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           G  PD  + S +  A + +   T G  +HS  ++TG   +  +  SLV MY KC   GS+
Sbjct: 395 GVEPDEASYSSLFHASASIAALTQGTMIHSHVLKTGHVKNSRISSSLVTMYGKC---GSM 451

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            D+ +VF    +HNV+ WTA+IT + Q G  + EA+KLF +M+   V P + TF SVL A
Sbjct: 452 LDAYQVFRETKEHNVVCWTAMITVFHQHGCAN-EAIKLFEEMLNEGVVPEYITFVSVLSA 510

Query: 398 C---GNLLDS--NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FE 451
           C   G + D           H +K G     C    ++ +  R GR+E+A +  ES+ FE
Sbjct: 511 CSHTGKIDDGFKYFNSMANVHNIKPGLEHYAC----MVDLLGRVGRLEEACRFIESMPFE 566

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFEL 476
            + + +  ++ A  K+ N E   E+
Sbjct: 567 PDSLVWGALLGACGKHANVEMGREV 591



 Score =  147 bits (371), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 194/395 (49%), Gaps = 13/395 (3%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +PD   L  +++  ++L+      Q+HS  + T     +    +L+ +YAKC   GS+  
Sbjct: 97  VPD---LKHLLNNAAKLKSLKHATQIHSQLVTTNNHASLANINTLLLLYAKC---GSIHH 150

Query: 340 SRKVFDRM--LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +  +F+       NV++WT +I    +S  +  +A+  F+ M    + PNHFTF+++L A
Sbjct: 151 TLLLFNTYPHPSTNVVTWTTLINQLSRS-NKPFQALTFFNRMRTTGIYPNHFTFSAILPA 209

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +    +  +Q++    K     D  V  +L+ MYA+ G M  A   F+ +  +NLVS+
Sbjct: 210 CAHAALLSEGQQIHALIHKHCFLNDPFVATALLDMYAKCGSMLLAENVFDEMPHRNLVSW 269

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N+M+  + KN    +A  +  E+    +G    + +S+LS  + +  +  G+Q+H  I+K
Sbjct: 270 NSMIVGFVKNKLYGRAIGVFREV--LSLGPDQVSISSVLSACAGLVELDFGKQVHGSIVK 327

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
            G      + N+L+ MY +C   E A ++F    DR+V++W  MI G  +     +A   
Sbjct: 328 RGLVGLVYVKNSLVDMYCKCGLFEDATKLFCGGGDRDVVTWNVMIMGCFRCRNFEQACTY 387

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F  M+ +G++P+  +Y ++  A +    +++G     S   + G V+     + +V + G
Sbjct: 388 FQAMIREGVEPDEASYSSLFHASASIAALTQG-TMIHSHVLKTGHVKNSRISSSLVTMYG 446

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           + GS+ +A +  R      +V+ W   +     HG
Sbjct: 447 KCGSMLDAYQVFRETK-EHNVVCWTAMITVFHQHG 480


>gi|168066429|ref|XP_001785140.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162663262|gb|EDQ50036.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 922

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 276/808 (34%), Positives = 456/808 (56%), Gaps = 19/808 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR Q+A+     M ++G  P+ +++  +L +C        G+ +HS +T++  E +  + 
Sbjct: 131 GRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHSHITKAGYESDVNVS 190

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +LI++Y KCG L  A K+F  M  +R++VSW++MIS YV  G   +A  +F +++  G 
Sbjct: 191 TALINMYCKCGSLELARKVFNEM-RERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGT 249

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN+  F++++ AC+N  ++  G  ++ ++ + G  + +V VG ALI M+ + GS  L +
Sbjct: 250 QPNKVSFASILGACTNPNDLEQGLKLHAYIKQAG-LEQEVLVGNALISMYARCGS--LAN 306

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD +   N V W  MI    + G   +A RLF DM   GF PDRFT + +++ C++
Sbjct: 307 ARQVFDNLRSPNRVSWNAMIAGYGE-GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICAD 365

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 GK+LHS  +RT    DV V  +L+ MYAKC   GS++++RKVF++M + N +SW
Sbjct: 366 RADLNRGKELHSQIVRTAWEADVTVATALISMYAKC---GSLEEARKVFNQMPEKNAVSW 422

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A I    + G  +KEA ++F  M +  V P+H TF ++L +C +  D      ++    
Sbjct: 423 NAFIACCCRHGS-EKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKID 481

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + G   ++ V N+LISMY R G++ DAR+ F  +  ++L S+N M+ AY ++  +  AF+
Sbjct: 482 QWGMLSNNLVANALISMYGRCGKLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFD 541

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  + +  G     YTF ++L   +++  +  G +IH  + K+G E +  I   LI MYS
Sbjct: 542 LFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYS 601

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C ++  A+ VFK +++++V+ W +M+  +        AL++F +M  +G+ P+  TY +
Sbjct: 602 KCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQDALKLFQQMRLEGVNPDSATYTS 661

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VL+AC+  G I  G K F +   E  +     HYACMV  LGR+  L EA EFI  +   
Sbjct: 662 VLNACARLGAIEHG-KKFHTQLKEAAMETDTRHYACMVAALGRASLLKEAEEFIEEISSE 720

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYASAGHWEYVANI 714
           +D L+W + L ACR+H +  L + A E +L+   Q  PA    L N+YA+AG WE V+ I
Sbjct: 721 SDALMWESLLVACRIHHNVGLAETAVEHLLDVKAQSSPAVCEQLMNIYAAAGRWEDVSVI 780

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           +  M+E  L+    C+ IE +++ H F     S P+ + +  ++++L  K+ + G+L D 
Sbjct: 781 KATMREAGLLAPKSCT-IEVNSEFHTFMTNHFS-PQ-IGVEDKIEELVWKMMDKGFLLDP 837

Query: 775 NFVLHELEEEQKVQYLFQH-SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
           ++  ++  E+++   LF H  E +AVA+GL  T     +R   +  V    H  +K+IS 
Sbjct: 838 HYAPNDSREKER---LFSHCPELLAVAYGLEHTPPGVLVRCVTDSPVTDPSHRMLKFISK 894

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              R I +RD N FH+ KDG CSC DYW
Sbjct: 895 AYNRGIFVRDPNCFHNFKDGICSCGDYW 922



 Score =  375 bits (962), Expect = e-101,   Method: Compositional matrix adjust.
 Identities = 220/658 (33%), Positives = 368/658 (55%), Gaps = 15/658 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           + L+ ++G   +L+ Y+  L+ C+++++   GK VH  +  ++ EP+  + N LIS+YSK
Sbjct: 39  VQLLGKRGVQANLNFYARRLQECVQAKSLAEGKKVHDHMRSAQFEPDIYLNNMLISMYSK 98

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG + +AN +F+SM +K D+VSW++MIS Y   G+  +A+ +F +M   G  PN+  F +
Sbjct: 99  CGSIEDANNVFQSMEDK-DVVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFIS 157

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           ++ AC     +  G  I+  + K GY +SDV V  ALI+M+ K GS++L  A KVF++M 
Sbjct: 158 ILSACQTPIVLEFGEQIHSHITKAGY-ESDVNVSTALINMYCKCGSLEL--ARKVFNEMR 214

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           E+N V WT MI+   Q G  ++A  LF  +I SG  P++ + + ++ AC+       G +
Sbjct: 215 ERNVVSWTAMISGYVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLK 274

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH++  + GL  +V VG +L+ MYA+C   GS+ ++R+VFD +   N +SW A+I GY +
Sbjct: 275 LHAYIKQAGLEQEVLVGNALISMYARC---GSLANARQVFDNLRSPNRVSWNAMIAGYGE 331

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
             G  +EA +LF DM Q    P+ FT+AS+L  C +  D N  +++++  V+     D  
Sbjct: 332 --GFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVT 389

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V  +LISMYA+ G +E+ARK F  + EKN VS+N  +    ++ + ++AF++  ++    
Sbjct: 390 VATALISMYAKCGSLEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDD 449

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V     TF +LL+  +S     +G  IH +I + G  SN+ + NALISMY RC  +  A 
Sbjct: 450 VIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAR 509

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           +VF  +  R++ SW +MI  + +HG    A ++F K  ++G K +  T+I VL A ++  
Sbjct: 510 EVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLE 569

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            +  G K    + ++ G+ + +     ++ +  + GSL +A    +++    DV+ W   
Sbjct: 570 DLDAGRK-IHGLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQ-EKDVVCWNAM 627

Query: 665 LGACR--VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           L A     HG   L K   +M LE    D A +  + N  A  G  E+      ++KE
Sbjct: 628 LAAYNHSDHGQDAL-KLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKE 684



 Score =  280 bits (716), Expect = 2e-72,   Method: Compositional matrix adjust.
 Identities = 168/545 (30%), Positives = 295/545 (54%), Gaps = 18/545 (3%)

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIR 188
           NE  +  +  G+  D    S+ +     +GK   +I   V++L + G   N   ++  ++
Sbjct: 6   NEGRRRIQESGSTWDA---SAKVGRNTWKGK---SIRGGVQLLGKRGVQANLNFYARRLQ 59

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
            C   +++A G  ++  + +   F+ D+ +   LI M+ K GS+  E A  VF  M +K+
Sbjct: 60  ECVQAKSLAEGKKVHDHM-RSAQFEPDIYLNNMLISMYSKCGSI--EDANNVFQSMEDKD 116

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  MI+     G  ++A+ LF  M   G  P++ +   ++SAC    +   G+Q+HS
Sbjct: 117 VVSWNAMISGYALHGRGQEAVDLFYQMQREGLKPNQNSFISILSACQTPIVLEFGEQIHS 176

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
              + G   DV V  +L++MY KC   GS++ +RKVF+ M + NV+SWTA+I+GYVQ G 
Sbjct: 177 HITKAGYESDVNVSTALINMYCKC---GSLELARKVFNEMRERNVVSWTAMISGYVQHGD 233

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             KEA  LF  +I+    PN  +FAS+L AC N  D     +++ +  + G   +  VGN
Sbjct: 234 -SKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQEVLVGN 292

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +LISMYAR G + +AR+ F++L   N VS+N M+  Y +    E+AF L  +++  G   
Sbjct: 293 ALISMYARCGSLANARQVFDNLRSPNRVSWNAMIAGYGEGF-MEEAFRLFRDMQQKGFQP 351

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             +T+ASLL+  +    + +G+++H++I+++ +E++  +  ALISMY++C ++E A +VF
Sbjct: 352 DRFTYASLLAICADRADLNRGKELHSQIVRTAWEADVTVATALISMYAKCGSLEEARKVF 411

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
            +M ++N +SW + I    +HG    A ++F +M  D + P+ +T+I +L++C+      
Sbjct: 412 NQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLNSCTSPEDFE 471

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
            G ++     D+ G++        ++ + GR G L +A E    +    D+  W   + A
Sbjct: 472 RG-RYIHGKIDQWGMLSNNLVANALISMYGRCGKLADAREVFYRIR-RRDLGSWNAMIAA 529

Query: 668 CRVHG 672
              HG
Sbjct: 530 YVQHG 534



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 144/529 (27%), Positives = 283/529 (53%), Gaps = 14/529 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G  ++A      + + G  P+  +++ +L +C    +   G  +H+ + ++ LE  
Sbjct: 228 YVQHGDSKEAFVLFQKLIRSGTQPNKVSFASILGACTNPNDLEQGLKLHAYIKQAGLEQE 287

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ N+LIS+Y++CG L  A ++F ++ +  + VSW++MI+ Y   G   +A  +F +M 
Sbjct: 288 VLVGNALISMYARCGSLANARQVFDNLRSP-NRVSWNAMIAGY-GEGFMEEAFRLFRDMQ 345

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + GF P+ + +++++  C++  ++  G  ++  +++  + ++DV V  ALI M+ K GS 
Sbjct: 346 QKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRTAW-EADVTVATALISMYAKCGS- 403

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            LE A KVF++M EKN V W   I  C + G  ++A ++F  M     +PD  T   +++
Sbjct: 404 -LEEARKVFNQMPEKNAVSWNAFIACCCRHGSEKEAFQVFKQMRRDDVIPDHVTFITLLN 462

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +C+  E F  G+ +H    + G+  +  V  +L+ MY +C   G + D+R+VF R+   +
Sbjct: 463 SCTSPEDFERGRYIHGKIDQWGMLSNNLVANALISMYGRC---GKLADAREVFYRIRRRD 519

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           + SW A+I  YVQ G  +  A  LF          + +TF +VL+A  NL D +   +++
Sbjct: 520 LGSWNAMIAAYVQHGA-NGSAFDLFIKYKSEGGKGDKYTFINVLRAIANLEDLDAGRKIH 578

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
               K G   D  +  +LI MY++ G + DA   F+++ EK++V +N M+ AY  + + +
Sbjct: 579 GLVEKAGLEKDIRILTTLIKMYSKCGSLRDAYSVFKNVQEKDVVCWNAMLAAYNHSDHGQ 638

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            A +L  ++   GV   + T+ S+L+  + +GAI  G++ H ++ ++  E++   Y  ++
Sbjct: 639 DALKLFQQMRLEGVNPDSATYTSVLNACARLGAIEHGKKFHTQLKEAAMETDTRHYACMV 698

Query: 532 SMYSRCANV-EAAFQVFKEMEDRNVISWTSMITGFAKH---GFAARALE 576
           +   R + + EA   + +   + + + W S++     H   G A  A+E
Sbjct: 699 AALGRASLLKEAEEFIEEISSESDALMWESLLVACRIHHNVGLAETAVE 747



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 182/354 (51%), Gaps = 7/354 (1%)

Query: 48  NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS 107
           N +I    +G +++A      M QKG  PD  TY+ LL  C    + + GK +HS + R+
Sbjct: 323 NAMIAGYGEGFMEEAFRLFRDMQQKGFQPDRFTYASLLAICADRADLNRGKELHSQIVRT 382

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
             E +  +  +LIS+Y+KCG L EA K+F  M  K + VSW++ I+     G + +A  +
Sbjct: 383 AWEADVTVATALISMYAKCGSLEEARKVFNQMPEK-NAVSWNAFIACCCRHGSEKEAFQV 441

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F +M      P+   F  ++ +C++ E+   G  I+G + + G   +++ V  ALI M+ 
Sbjct: 442 FKQMRRDDVIPDHVTFITLLNSCTSPEDFERGRYIHGKIDQWGMLSNNL-VANALISMYG 500

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           +    L  A +VF ++  ++   W  MI    Q G    A  LF+     G   D++T  
Sbjct: 501 RCG-KLADAREVFYRIRRRDLGSWNAMIAAYVQHGANGSAFDLFIKYKSEGGKGDKYTFI 559

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V+ A + LE   +G+++H    + GL  D+ +  +L+ MY+KC   GS+ D+  VF  +
Sbjct: 560 NVLRAIANLEDLDAGRKIHGLVEKAGLEKDIRILTTLIKMYSKC---GSLRDAYSVFKNV 616

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            + +V+ W A++  Y  S    ++A+KLF  M    V P+  T+ SVL AC  L
Sbjct: 617 QEKDVVCWNAMLAAYNHS-DHGQDALKLFQQMRLEGVNPDSATYTSVLNACARL 669


>gi|449443492|ref|XP_004139511.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Cucumis sativus]
          Length = 678

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 252/660 (38%), Positives = 400/660 (60%), Gaps = 16/660 (2%)

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           L C  F +     CA ++     S D +     F  + +   +   L  T  +  G   +
Sbjct: 30  LSCFLFAAKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDL---LRTTHISSSGTSSN 86

Query: 267 AIRLF-LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           +  L+ LD+I  G L P+R   S +++ C+ L     G+ +H+    +    D+ +   +
Sbjct: 87  STGLYVLDLINCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFI 146

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           ++MYAKC   GS+++++ +FD+M   +++SWT +I+GY QSG +  EA+ LF  M+    
Sbjct: 147 LNMYAKC---GSLEEAQDLFDKMPTKDMVSWTVLISGYSQSG-QASEALALFPKMLHLGF 202

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            PN FT +S+LKA G     +   Q++  ++K G  ++  VG+SL+ MYAR   M +A+ 
Sbjct: 203 QPNEFTLSSLLKASGTGPSDHHGRQLHAFSLKYGYDMNVHVGSSLLDMYARWAHMREAKV 262

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F SL  KN+VS+N ++  +A+    E    L  ++   G   + +T++S+ +  +S G+
Sbjct: 263 IFNSLAAKNVVSWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGS 322

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           + +G+ +HA +IKSG +    I N LI MY++  +++ A +VF+ +  ++++SW S+I+G
Sbjct: 323 LEQGKWVHAHVIKSGGQPIAYIGNTLIDMYAKSGSIKDAKKVFRRLVKQDIVSWNSIISG 382

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +A+HG  A AL++F +ML   ++PN IT+++VL+ACSH+GL+ EG  +F  M  +H I  
Sbjct: 383 YAQHGLGAEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEGQYYFELM-KKHKIEA 441

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           ++ H+  +VDLLGR+G L EA +FI  MP+     VW   LG+CR+H + +LG +AAE I
Sbjct: 442 QVAHHVTVVDLLGRAGRLNEANKFIEEMPIKPTAAVWGALLGSCRMHKNMDLGVYAAEQI 501

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
            E DP D   H+LLSN+YASAG     A +RK MKE  + KE  CSW+E +N+VH F   
Sbjct: 502 FELDPHDSGPHVLLSNIYASAGRLSDAAKVRKMMKESGVKKEPACSWVEIENEVHVFVAN 561

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTN---FVLHELEEEQKVQYLFQHSEKIAVAF 801
           + SHP   EI    ++++ KIKE GY+PDT+   F +++ + E K+QY   HSEK+A+AF
Sbjct: 562 DDSHPMREEIQRMWEKISGKIKEIGYVPDTSHVLFFMNQQDRELKLQY---HSEKLALAF 618

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            ++ T     IR+ KN+R+CGDCH+A K+ S V GREI++RD+NRFHH   G CSC DYW
Sbjct: 619 AVLKTPPGLTIRIKKNIRICGDCHSAFKFASRVLGREIIVRDTNRFHHFLHGMCSCRDYW 678



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 145/443 (32%), Positives = 233/443 (52%), Gaps = 13/443 (2%)

Query: 10  AKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLM 69
           AK   P +F  SN +        + PF       + L    I           ++ LDL+
Sbjct: 37  AKYGTPCAFVESNTAESQDWDPCTAPFTGVLQDEDLLRTTHISSSGTSSNSTGLYVLDLI 96

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
                 P+   YS +L  C   R    G+ +H+ +  S  E + V+LN ++++Y+KCG L
Sbjct: 97  NCGSLEPERTLYSKMLNKCTYLRKLKQGRAIHAHIQSSTFEDDLVLLNFILNMYAKCGSL 156

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
            EA  +F  M  K D+VSW+ +IS Y   G+  +A+ +F +ML LGF PNE+  S++++A
Sbjct: 157 EEAQDLFDKMPTK-DMVSWTVLISGYSQSGQASEALALFPKMLHLGFQPNEFTLSSLLKA 215

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
                +   G  ++ F LK GY D +V VG +L+DM+ + +  +  A  +F+ +  KN V
Sbjct: 216 SGTGPSDHHGRQLHAFSLKYGY-DMNVHVGSSLLDMYARWA-HMREAKVIFNSLAAKNVV 273

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  +I    + G     +RLFL M+  GF P  FT S V +AC+       GK +H+  
Sbjct: 274 SWNALIAGHARKGEGEHVMRLFLQMLRQGFEPTHFTYSSVFTACASSGSLEQGKWVHAHV 333

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I++G      +G +L+DMYAK    GS+ D++KVF R++  +++SW +II+GY Q  G  
Sbjct: 334 IKSGGQPIAYIGNTLIDMYAK---SGSIKDAKKVFRRLVKQDIVSWNSIISGYAQH-GLG 389

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN 427
            EA++LF  M++ +V PN  TF SVL AC +  LLD     Q Y   +K+ +       +
Sbjct: 390 AEALQLFEQMLKAKVQPNEITFLSVLTACSHSGLLDEG---QYYFELMKKHKIEAQVAHH 446

Query: 428 -SLISMYARSGRMEDARKAFESL 449
            +++ +  R+GR+ +A K  E +
Sbjct: 447 VTVVDLLGRAGRLNEANKFIEEM 469


>gi|302758830|ref|XP_002962838.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
 gi|300169699|gb|EFJ36301.1| hypothetical protein SELMODRAFT_79052 [Selaginella moellendorffii]
          Length = 652

 Score =  481 bits (1239), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/645 (38%), Positives = 384/645 (59%), Gaps = 13/645 (2%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR---LFLDMILSG 278
           LID++ K     + A  VF  +  KN   WT+M+    +    RD  R    F  M+L G
Sbjct: 16  LIDLYTKCD-RFDDALAVFHGIQSKNVFSWTMMLAAFAE---NRDFDRCWLFFRGMLLQG 71

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             P    +S  +SAC++    T G+ +    + TG+  +  V  +LV +Y K    G   
Sbjct: 72  INPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKL---GHCT 128

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           D+  VF RM   +V++W+A++  Y ++G   +EA+ LF  M    VAPN  T  S L AC
Sbjct: 129 DAASVFLRMSHRDVVAWSAMVAAYARNG-HPREALGLFRQMDLDGVAPNKVTLVSGLDAC 187

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +L D      ++     +G      VG +L+++Y + GR+E A +AF  + EKN+V+++
Sbjct: 188 ASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVEKNVVAWS 247

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI--I 516
            +  AYA+N  +  A  +LH ++  G+  ++ TF S+L   ++I A+ +G +IH RI  +
Sbjct: 248 AISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHERIHVL 307

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
             G ES+  +  AL++MYS+C N+  A  +F ++   +++ W S+I   A+HG   +ALE
Sbjct: 308 GGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALE 367

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M  +G++P  IT+ +VL ACSHAG++ +G KHF S   +HGI    EH+ CMVDLL
Sbjct: 368 LFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLL 427

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GR+G + ++ + +  MP     + W  FLGACR + + +    AAE + + DP+  A ++
Sbjct: 428 GRAGWIVDSEDLLLHMPFEPHPVAWMAFLGACRTYRNMDGAIWAAENLFQLDPRKRAPYV 487

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YA AG W  VA +R+ M+    +KEAG SWIE  ++VH+F  G+  HP+  EI+A
Sbjct: 488 LLSNMYAKAGRWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHA 547

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
           EL +L   +K  GY+PDT  VLH++++E K   +  HSEK+A+AF L++T +  PIRV K
Sbjct: 548 ELQRLTKLMKAAGYVPDTEMVLHDVKQEVKETMVGYHSEKLAMAFALLTTPEGSPIRVVK 607

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVC DCHTA K+IS +  REIV+RD NRFH  ++G CSC DYW
Sbjct: 608 NLRVCNDCHTASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 652



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 207/402 (51%), Gaps = 11/402 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE- 170
           N  + N LI LY+KC   ++A  +F  + +K ++ SW+ M++++    +  D   +F   
Sbjct: 9   NRFLCNLLIDLYTKCDRFDDALAVFHGIQSK-NVFSWTMMLAAFAE-NRDFDRCWLFFRG 66

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML  G  P E   S  + AC++   + IG  I   +L  G  + +  V  AL+ ++ K  
Sbjct: 67  MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTG-IEEESIVQTALVSLYGKLG 125

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                A  VF +M+ ++ V W+ M+    + G PR+A+ LF  M L G  P++ TL   +
Sbjct: 126 -HCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGL 184

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC+ L    SG  +H      G+   V VG +LV++Y KC   G ++ + + F ++++ 
Sbjct: 185 DACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKC---GRIEAAAEAFGQIVEK 241

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           NV++W+AI   Y ++  R+++A+++   M    +APN  TF SVL AC  +       ++
Sbjct: 242 NVVAWSAISAAYARN-DRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRI 300

Query: 411 Y--THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +   H +  G   D  V  +L++MY++ G +  A   F+ +   +LV +N+++   A++ 
Sbjct: 301 HERIHVLGGGLESDVYVLTALVNMYSKCGNLALAGNMFDKIAHLDLVLWNSLIATNAQHG 360

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            +EKA EL   +   G+  +  TF S+L   S  G + +G +
Sbjct: 361 QTEKALELFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRK 402



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 98/332 (29%), Positives = 176/332 (53%), Gaps = 9/332 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G +P     S+ L +C  +R   +G+ +   +  + +E  S++  +L+SLY K G 
Sbjct: 67  MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGH 126

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
             +A  +F  M + RD+V+WS+M+++Y   G   +A+ +F +M   G  PN+    + + 
Sbjct: 127 CTDAASVFLRMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLD 185

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC++  ++  G +++  +   G   S V VG AL++++ K    +E+A + F ++ EKN 
Sbjct: 186 ACASLGDLRSGALMHQRVEAQG-IQSGVVVGTALVNLYGKCG-RIEAAAEAFGQIVEKNV 243

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS- 307
           V W+ +     +    RDAIR+   M L G  P+  T   V+ AC+ +     G+++H  
Sbjct: 244 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLAPNSTTFVSVLDACAAIAALKQGRRIHER 303

Query: 308 -WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
              +  GL  DV V  +LV+MY+KC   G++  +  +FD++   +++ W ++I    Q G
Sbjct: 304 IHVLGGGLESDVYVLTALVNMYSKC---GNLALAGNMFDKIAHLDLVLWNSLIATNAQHG 360

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             +K A++LF  M    + P   TF SVL AC
Sbjct: 361 QTEK-ALELFERMRLEGLQPTIITFTSVLFAC 391



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 62/235 (26%), Positives = 113/235 (48%), Gaps = 2/235 (0%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI +Y +  R +DA   F  +  KN+ S+  M+ A+A+N + ++ +     +   G+ 
Sbjct: 14  NLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFFRGMLLQGIN 73

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
                 +  LS  +    I  G  I   I+ +G E    +  AL+S+Y +  +   A  V
Sbjct: 74  PGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSLYGKLGHCTDAASV 133

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  M  R+V++W++M+  +A++G    AL +F +M  DG+ PN +T ++ L AC+  G +
Sbjct: 134 FLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDL 193

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
             G        +  GI   +     +V+L G+ G +  A E    + +  +V+ W
Sbjct: 194 RSG-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQI-VEKNVVAW 246



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 119/250 (47%), Gaps = 3/250 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+     M   G  P+  T    L +C    +   G L+H  +    ++   V+
Sbjct: 155 NGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVV 214

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +L++LY KCG +  A + F  +  K ++V+WS++ ++Y    +  DAI +   M   G
Sbjct: 215 GTALVNLYGKCGRIEAAAEAFGQIVEK-NVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 273

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFL-LKCGYFDSDVCVGCALIDMFVKGSVDLE 234
             PN   F +V+ AC+    +  G  I+  + +  G  +SDV V  AL++M+ K   +L 
Sbjct: 274 LAPNSTTFVSVLDACAAIAALKQGRRIHERIHVLGGGLESDVYVLTALVNMYSKCG-NLA 332

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +FDK+   + V W  +I    Q G    A+ LF  M L G  P   T + V+ ACS
Sbjct: 333 LAGNMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACS 392

Query: 295 ELELFTSGKQ 304
              +   G++
Sbjct: 393 HAGMLDQGRK 402



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 71/256 (27%), Positives = 103/256 (40%), Gaps = 42/256 (16%)

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
           G+  N  + N LI +Y++C   + A  VF  ++ +NV SWT M+  FA++    R    F
Sbjct: 5   GWIRNRFLCNLLIDLYTKCDRFDDALAVFHGIQSKNVFSWTMMLAAFAENRDFDRCWLFF 64

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM--------YDEHGIVQ------ 624
             ML  GI P  +     LSAC+ A  I+ G    RS+         +E  IVQ      
Sbjct: 65  RGMLLQGINPGEVGISIFLSACTDAREITIG----RSIQLAILGTGIEEESIVQTALVSL 120

Query: 625 ---------------RMEH-----YACMVDLLGRSGSLTEALEFIRSMPL---SADVLVW 661
                          RM H     ++ MV    R+G   EAL   R M L   + + +  
Sbjct: 121 YGKLGHCTDAASVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTL 180

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDP-AAHILLSNLYASAGHWEYVANIRKRMKE 720
            + L AC   GD   G    + +  Q  Q        L NLY   G  E  A    ++ E
Sbjct: 181 VSGLDACASLGDLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAAEAFGQIVE 240

Query: 721 RNLIKEAGCSWIEADN 736
           +N++  +  S   A N
Sbjct: 241 KNVVAWSAISAAYARN 256


>gi|449523810|ref|XP_004168916.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g01510-like [Cucumis
           sativus]
          Length = 816

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/779 (33%), Positives = 443/779 (56%), Gaps = 10/779 (1%)

Query: 86  KSCIRSRNF-HLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +S  +  NF   G LVH+     ++   N++ LN +IS + K G L++A ++F  M  +R
Sbjct: 45  RSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMV-ER 103

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
             VSW+ +I  Y+   +  +A  ++ +M   G  P+      ++      E   +   I+
Sbjct: 104 TAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIH 163

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             ++K GY + ++ V  +L+D + K    L  A ++F  M  K+TV +  ++T  +  G 
Sbjct: 164 THVIKLGY-EYNLMVCNSLVDAYCKTHC-LYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +AI LFL++  SG  P  FT + ++SA   L+    G+Q+H + ++T    +V VG +
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+D Y+K      VD+  K+F  M + + +S+  +IT Y  +G + KE+  LF  +   +
Sbjct: 282 LLDYYSK---HDQVDEVGKLFXEMPELDGISYNVVITSYAWNG-QFKESFDLFRKLQFTR 337

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
                F FA++L    + L+  +  Q++  A+  G   +  V N+L+ MYA+    ++A+
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           K F+++  K+ V +  M+ AY +    E+   +  ++  TGV     TFAS+L   +++ 
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           +I  G Q+H+ +I+SGF SN    +AL+  Y++C  +  A + F EM +RN +SW ++I+
Sbjct: 458 SISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALIS 517

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
            +A++G     L  F +M+  G KP+ +++++VLSACSH G + E   HF SM   + + 
Sbjct: 518 AYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVT 577

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            + EHY  MVD+L R+G   EA + +  MP     ++W + L +CR+H + EL K AA+ 
Sbjct: 578 PKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADR 637

Query: 684 ILE-QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
           +   +D +D A +I +SN+YA AG W+ VA ++K M++R + K    SW+E  ++ H F 
Sbjct: 638 LFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFS 697

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
             + SHP+  +I  +++ L+ ++++ GY PDT   LH+++E  K++ L  HSE+ A+AF 
Sbjct: 698 ANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFA 757

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           L++T    PI V KNLR C DCH AIK IS +  REI++RDS+RFHH KDG CSC DYW
Sbjct: 758 LMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 226/440 (51%), Gaps = 26/440 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G  ++AI     +   G  P   T++ LL + +   +   G+ VH  + ++    N  
Sbjct: 218 NEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+  YSK   ++E  K+F  M  + D +S++ +I+SY   G+  ++  +F ++   
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFXEMP-ELDGISYNVVITSYAWNGQFKESFDLFRKLQFT 336

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDL 233
            F   ++ F+ ++   +++ N+ +G  I+   +  G  F+S   V  AL+DM+ K + D 
Sbjct: 337 RFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDK 394

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A K+FD +  K+TV WT MI+   Q G   + I +F DM  +G   D+ T + ++ AC
Sbjct: 395 E-AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRAC 453

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + L   + G+QLHS  IR+G   +V  G +L+D YAKC   G + D+ K F  M + N +
Sbjct: 454 ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKC---GCMTDAIKSFGEMPERNSV 510

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN-------LLDSNV 406
           SW A+I+ Y Q+G  D   +  F  MIQ    P+  +F SVL AC +       L   N 
Sbjct: 511 SWNALISAYAQNGNVDG-TLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNS 569

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYA 465
             Q+Y    KR          S++ +  R+GR ++A K    + FE + + +++++++  
Sbjct: 570 MTQIYEVTPKREHY------TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCR 623

Query: 466 KNLNSE---KAFELLHEIED 482
            + N E   KA + L  +ED
Sbjct: 624 IHKNHELAKKAADRLFNMED 643



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P +  +  ++  G+ ++ I     M + G   D  T++ +L++C    +  LG+ +HSLL
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            RS    N    ++L+  Y+KCG + +A K F  M  +R+ VSW+++IS+Y   G     
Sbjct: 470 IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGT 528

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENV--AIGHI-----IYGFLLKCGYFDSDVC 217
           ++ F +M++ G+ P+   F +V+ ACS+   V  A+ H      IY    K  ++ S V 
Sbjct: 529 LNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVD 588

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           V C        G  D   A K+  +M  E + + W+ ++  C
Sbjct: 589 VLCR------NGRFD--EAEKLMTEMPFEPSEIMWSSVLNSC 622



 Score = 48.1 bits (113), Expect = 0.019,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           I A I+K+GF  N C  N  ++ +    ++  A QVF +M  +N IS   MI+G  K G 
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
            ++A E+F  M    ++   +++  ++     +    E ++ +  M    G ++    Y 
Sbjct: 90  LSKARELFDGM----VERTAVSWTILIGGYLQSNQSKEAFRLYADM--RRGGIE--PDYV 141

Query: 631 CMVDLLGRSGSL 642
            +V LL   G L
Sbjct: 142 TLVTLLSGFGEL 153


>gi|225448607|ref|XP_002274158.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 820

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 257/702 (36%), Positives = 413/702 (58%), Gaps = 14/702 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--VILNSLISLYSKCGDLNEANKIFKSMGN 141
           +L+ C    +    K VH L+ +S  E     V+ N    +YSKC +   A  +F  M  
Sbjct: 124 VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM-P 182

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R++ SW+ MI      G   D    F EML  G  P+++ +SA+I++C   +++ +G +
Sbjct: 183 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 242

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++  ++  G F + + V  +L++M+ K GS+  E +Y VF+ MTE N V W  MI+ CT 
Sbjct: 243 VHAQIVMRG-FATHIFVSTSLLNMYAKLGSI--EDSYWVFNMMTEHNQVSWNAMISGCTS 299

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G   +A  LF+ M      P+ +TL  V  A  +L     GK++ + A   G+  +V V
Sbjct: 300 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 359

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFD-RMLDHNVMS-WTAIITGYVQSGGRDKEAVKLFSD 378
           G +L+DMY+KC   GS+ D+R VFD   ++  V + W A+I+GY QSG   +EA++L+  
Sbjct: 360 GTALIDMYSKC---GSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC-SQEALELYVQ 415

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSG 437
           M Q  +  + +T+ SV  A            V+   +K G  L    V N++   Y++ G
Sbjct: 416 MCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCG 475

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            +ED RK F+ + E+++VS+ T+V AY+++   E+A      + + G   + +TF+S+L 
Sbjct: 476 FLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLI 535

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             +S+  +  G Q+H  + K+G ++  CI +ALI MY++C ++  A +VF ++ + +++S
Sbjct: 536 SCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVS 595

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           WT++I+G+A+HG    AL++F +M   GIK N +T + VL ACSH G++ EG  +F+ M 
Sbjct: 596 WTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQME 655

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           D +G+V  MEHYAC++DLLGR G L +A+EFIR MP+  + +VW+T LG CRVHG+ ELG
Sbjct: 656 DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELG 715

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           + AA  IL   P+  A ++LLSN Y   G +E   ++R  MK++ + KE G SWI    +
Sbjct: 716 EIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGR 775

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
           VHKF+ G+  HP+  EIY +L++L  KIK  GY+PD  +VL+
Sbjct: 776 VHKFYSGDQQHPQKKEIYVKLEELREKIKAMGYVPDLRYVLN 817



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 264/510 (51%), Gaps = 20/510 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD   YS +++SCI   +  LGK+VH+ +       +  +  SL+++Y+K G 
Sbjct: 212 MLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGS 271

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + ++  +F  M  + + VSW++MIS   + G  ++A  +FV M      PN Y   +V +
Sbjct: 272 IEDSYWVFNMM-TEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSK 330

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A     +V +G  +     + G  + +V VG ALIDM+ K GS  L  A  VFD      
Sbjct: 331 AVGKLVDVNMGKEVQNCASELG-IEGNVLVGTALIDMYSKCGS--LHDARSVFDTNFINC 387

Query: 248 TVG--WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            V   W  MI+  +Q GC ++A+ L++ M  +G   D +T   V +A +  +    G+ +
Sbjct: 388 GVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVV 447

Query: 306 HSWAIRTGLALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           H   ++ GL L V  V  ++ D Y+KC   G ++D RKVFDRM + +++SWT ++T Y Q
Sbjct: 448 HGMVLKCGLDLMVVSVNNAIADAYSKC---GFLEDVRKVFDRMEERDIVSWTTLVTAYSQ 504

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           S    +EA+  F  M +   APN FTF+SVL +C +L       QV+    K G   + C
Sbjct: 505 S-SLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKC 563

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           + ++LI MYA+ G + +A K F+ +   ++VS+  ++  YA++   E A +L   +E +G
Sbjct: 564 IESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG 623

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----ESNHCIYNALISMYSRCANV 540
           +  +A T   +L   S  G + +G   + + ++ G+    E  H  Y  +I +  R   +
Sbjct: 624 IKANAVTLLCVLFACSHGGMVEEG-LFYFQQMEDGYGVVPEMEH--YACIIDLLGRVGRL 680

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHG 569
           + A +  ++M  + N + W +++ G   HG
Sbjct: 681 DDAMEFIRKMPMEPNEMVWQTLLGGCRVHG 710



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 166/313 (53%), Gaps = 19/313 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  Q+A+     M Q G   DL TY  +  +   S++   G++VH ++ +  L+   V +
Sbjct: 404 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 463

Query: 117 NSLIS-LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
           N+ I+  YSKCG L +  K+F  M  +RDIVSW++++++Y       +A+  F  M E G
Sbjct: 464 NNAIADAYSKCGFLEDVRKVFDRM-EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEG 522

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
           F PN++ FS+V+ +C++   +  G  ++G L K G  D++ C+  ALIDM+ K GS+   
Sbjct: 523 FAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAG-LDTEKCIESALIDMYAKCGSIT-- 579

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A KVFDK++  + V WT +I+   Q G   DA++LF  M LSG   +  TL  V+ ACS
Sbjct: 580 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 639

Query: 295 -----ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-L 348
                E  LF   +    + +   +    C+    +D+  +    G +DD+ +   +M +
Sbjct: 640 HGGMVEEGLFYFQQMEDGYGVVPEMEHYACI----IDLLGRV---GRLDDAMEFIRKMPM 692

Query: 349 DHNVMSWTAIITG 361
           + N M W  ++ G
Sbjct: 693 EPNEMVWQTLLGG 705



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/319 (26%), Positives = 146/319 (45%), Gaps = 48/319 (15%)

Query: 324 LVDMYAKCTVDGSVDDSRK-------------------------------------VFDR 346
           L+D+   C   GS+ +++                                      VFD 
Sbjct: 121 LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 180

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   NV SWT +I G  +  G   +  K F +M+   + P+ F +++++++C  L    +
Sbjct: 181 MPQRNVFSWTVMIVGSTEH-GLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 239

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + V+   V RG A    V  SL++MYA+ G +ED+   F  + E N VS+N M+     
Sbjct: 240 GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTS 299

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N    +AF+L   +++     + YT  S+      +  +  G+++     + G E N  +
Sbjct: 300 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 359

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVIS------WTSMITGFAKHGFAARALEIFYK 580
             ALI MYS+C ++  A  VF    D N I+      W +MI+G+++ G +  ALE++ +
Sbjct: 360 GTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 415

Query: 581 MLADGIKPNGITYIAVLSA 599
           M  +GI  +  TY +V +A
Sbjct: 416 MCQNGITSDLYTYCSVFNA 434



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 15/206 (7%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++A+ T  LM ++G  P+  T+S +L SC        G+ VH LL ++ L+    I ++L
Sbjct: 509 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESAL 568

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I +Y+KCG + EA K+F  + N  DIVSW+++IS Y   G   DA+ +F  M   G   N
Sbjct: 569 IDMYAKCGSITEAGKVFDKISNP-DIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKAN 627

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-----FDSDVCVGCALIDMFVKGSVD-L 233
                 V+ ACS+   V  G + Y   ++ GY      +   C+    ID+   G V  L
Sbjct: 628 AVTLLCVLFACSHGGMVEEG-LFYFQQMEDGYGVVPEMEHYACI----IDLL--GRVGRL 680

Query: 234 ESAYKVFDKM-TEKNTVGWTLMITRC 258
           + A +   KM  E N + W  ++  C
Sbjct: 681 DDAMEFIRKMPMEPNEMVWQTLLGGC 706



 Score = 79.3 bits (194), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 6/196 (3%)

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH--CIYNALISMYSRC 537
           I +T   T       +L   +  G+I + + +H  ++KS FE      ++N    +YS+C
Sbjct: 109 ISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKC 168

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
           +   AA  VF EM  RNV SWT MI G  +HG      + F +ML  GI P+   Y A++
Sbjct: 169 SEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAII 228

Query: 598 SACSHAGLIS-EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
            +C   GL S E  K   +     G    +     ++++  + GS+ ++  ++ +M    
Sbjct: 229 QSC--IGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFNMMTEH 285

Query: 657 DVLVWRTFLGACRVHG 672
           + + W   +  C  +G
Sbjct: 286 NQVSWNAMISGCTSNG 301


>gi|326490792|dbj|BAJ90063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 754

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 238/609 (39%), Positives = 366/609 (60%), Gaps = 29/609 (4%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS---- 336
           P R T+SG+V A S L     G+Q+H   +R G          LVDMYAK  + G     
Sbjct: 147 PSRITMSGMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRV 206

Query: 337 ------------------------VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
                                   V+++R VF+ M+D + ++WT ++TG  Q+G    EA
Sbjct: 207 FDEMVVKNVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNG-LQSEA 265

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           + +F  M    V  + +TF S+L ACG L  S   +Q++ + ++     +  VG++L+ M
Sbjct: 266 LDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDM 325

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++   +  A   F  +  KN++S+  M+  Y +N   E+A  +  E++  G+  + +T 
Sbjct: 326 YSKCRSIRLAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTL 385

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S++S  +++ ++ +G Q H   + SG      + +AL+++Y +C ++E A ++F EM  
Sbjct: 386 GSVISSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPF 445

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            + +S+T++++G+A+ G A   +++F KML  G+KPNG+T+I VLSACS +GL+ +G  +
Sbjct: 446 HDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSRSGLVEKGCSY 505

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F SM  +HGIV   +HY CM+DL  RSG L EA EFIR MP   D + W T L ACR+ G
Sbjct: 506 FHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           D E+GK AAE +L+ DPQ+PA+++LL +++AS G W  VA +R+ M++R + KE GCSWI
Sbjct: 566 DMEIGKWAAENLLKTDPQNPASYVLLCSMHASKGEWSEVALLRRGMRDRQVKKEPGCSWI 625

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           +  N+VH F   + SHP +  IY +L  L  K+ E GY PD + VLH++ + +KV  L  
Sbjct: 626 KYKNRVHIFSADDQSHPFSGTIYEKLQWLNSKMAEEGYKPDVSSVLHDVADAEKVHMLSN 685

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSEK+A+AFGLI   +  PIRV KNLRVC DCH A K+IS +TGR+I++RD+ RFH   +
Sbjct: 686 HSEKLAIAFGLIFVPEEMPIRVVKNLRVCVDCHNATKFISKITGRDILVRDAVRFHKFSN 745

Query: 853 GKCSCNDYW 861
           G CSC D+W
Sbjct: 746 GICSCGDFW 754



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 117/338 (34%), Positives = 192/338 (56%), Gaps = 16/338 (4%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N V+ N++I+   +C  + EA  +F++M + RD ++W++M++     G Q +A+ +F  M
Sbjct: 214 NVVMYNTMITGLLRCKMVEEARGVFEAMVD-RDSITWTTMVTGLTQNGLQSEALDVFRRM 272

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G   ++Y F +++ AC        G  I+ + ++  Y D ++ VG AL+DM+ K  S
Sbjct: 273 RAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLY-DGNIFVGSALVDMYSKCRS 331

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           + L  A  VF +MT KN + WT MI    Q GC  +A+R+F +M   G  P+ FTL  V+
Sbjct: 332 IRLAEA--VFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVI 389

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           S+C+ L     G Q H  A+ +GL   + V  +LV +Y KC   GS++D+ ++FD M  H
Sbjct: 390 SSCANLASLEEGAQFHCMALVSGLRPYITVSSALVTLYGKC---GSIEDAHRLFDEMPFH 446

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ- 409
           + +S+TA+++GY Q  G+ KE + LF  M+   V PN  TF  VL AC     S + E+ 
Sbjct: 447 DQVSYTALVSGYAQF-GKAKETIDLFEKMLLKGVKPNGVTFIGVLSACSR---SGLVEKG 502

Query: 410 -VYTHAVKR--GRALDDCVGNSLISMYARSGRMEDARK 444
             Y H++++  G  L D     +I +Y+RSGR+++A +
Sbjct: 503 CSYFHSMQQDHGIVLLDDHYTCMIDLYSRSGRLKEAEE 540



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/357 (27%), Positives = 172/357 (48%), Gaps = 38/357 (10%)

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ------GQVAPNHFTFA 392
           D  ++F  M   + +S+ A+I G+  +G   + A    + + +       +V P+  T +
Sbjct: 94  DMDRLFASMPQRDAVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMS 153

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
            ++ A   L D  +  QV+   ++ G        + L+ MYA+ G + DA++ F+ +  K
Sbjct: 154 GMVMAASALGDRALGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVK 213

Query: 453 NLVSYN-------------------------------TMVDAYAKNLNSEKAFELLHEIE 481
           N+V YN                               TMV    +N    +A ++   + 
Sbjct: 214 NVVMYNTMITGLLRCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMR 273

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GVG   YTF S+L+   ++ A  +G+QIHA  I++ ++ N  + +AL+ MYS+C ++ 
Sbjct: 274 AEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIFVGSALVDMYSKCRSIR 333

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A  VF+ M  +N+ISWT+MI G+ ++G    A+ +F +M  DGIKPN  T  +V+S+C+
Sbjct: 334 LAEAVFRRMTCKNIISWTAMIVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCA 393

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           +   + EG   F  M    G+   +   + +V L G+ GS+ +A      MP    V
Sbjct: 394 NLASLEEG-AQFHCMALVSGLRPYITVSSALVTLYGKCGSIEDAHRLFDEMPFHDQV 449



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 141/279 (50%), Gaps = 8/279 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M  +G   D  T+  +L +C        GK +H+   R+  + N  
Sbjct: 258 QNGLQSEALDVFRRMRAEGVGIDQYTFGSILTACGALAASEEGKQIHAYTIRTLYDGNIF 317

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKC  +  A  +F+ M  K +I+SW++MI  Y   G   +A+ +F EM   
Sbjct: 318 VGSALVDMYSKCRSIRLAEAVFRRMTCK-NIISWTAMIVGYGQNGCGEEAVRVFSEMQTD 376

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  PN++   +VI +C+N  ++  G   +   L  G     + V  AL+ ++ K GS+  
Sbjct: 377 GIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSG-LRPYITVSSALVTLYGKCGSI-- 433

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+++FD+M   + V +T +++   Q G  ++ I LF  M+L G  P+  T  GV+SAC
Sbjct: 434 EDAHRLFDEMPFHDQVSYTALVSGYAQFGKAKETIDLFEKMLLKGVKPNGVTFIGVLSAC 493

Query: 294 SELELFTSG-KQLHSWAIRTGLA-LDVCVGCSLVDMYAK 330
           S   L   G    HS     G+  LD    C ++D+Y++
Sbjct: 494 SRSGLVEKGCSYFHSMQQDHGIVLLDDHYTC-MIDLYSR 531



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 143/335 (42%), Gaps = 82/335 (24%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNL------------------------------ 454
           V N L++ YARSGR+  AR+ F+++ + NL                              
Sbjct: 47  VLNHLLTAYARSGRLPLARRLFDAMPDPNLFTRNALLSALAHARLLPDMDRLFASMPQRD 106

Query: 455 -VSYNTMVDAYA----KNLNSEKAFELLHE---IEDTGVGTSAYTFASLLSGASSIGAIG 506
            VSYN ++  ++        +     LL E   ++   V  S  T + ++  AS++G   
Sbjct: 107 AVSYNALIAGFSGAGAPARAAGAYRALLREEAVVDGARVRPSRITMSGMVMAASALGDRA 166

Query: 507 KGEQIHARIIKSGFES-------------------------------NHCIYNALISMYS 535
            G Q+H +I++ GF +                               N  +YN +I+   
Sbjct: 167 LGRQVHCQIMRLGFGAYAFTWSPLVDMYAKMGLIGDAKRVFDEMVVKNVVMYNTMITGLL 226

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           RC  VE A  VF+ M DR+ I+WT+M+TG  ++G  + AL++F +M A+G+  +  T+ +
Sbjct: 227 RCKMVEEARGVFEAMVDRDSITWTTMVTGLTQNGLQSEALDVFRRMRAEGVGIDQYTFGS 286

Query: 596 VLSACSHAGLISEGWK----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           +L+AC       EG +      R++YD +  V      + +VD+  +  S+  A    R 
Sbjct: 287 ILTACGALAASEEGKQIHAYTIRTLYDGNIFVG-----SALVDMYSKCRSIRLAEAVFRR 341

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           M    +++ W   +     +G    G+ A  +  E
Sbjct: 342 MTCK-NIISWTAMIVG---YGQNGCGEEAVRVFSE 372



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 103/224 (45%), Gaps = 23/224 (10%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +  +G  ++A+     M   G  P+  T   ++ SC    +   G   H +   S L
Sbjct: 354 IVGYGQNGCGEEAVRVFSEMQTDGIKPNDFTLGSVISSCANLASLEEGAQFHCMALVSGL 413

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            P   + ++L++LY KCG + +A+++F  M    D VS+++++S Y   GK  + I +F 
Sbjct: 414 RPYITVSSALVTLYGKCGSIEDAHRLFDEM-PFHDQVSYTALVSGYAQFGKAKETIDLFE 472

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS----------DVCVG 219
           +ML  G  PN   F  V+ ACS +  V  G         C YF S          D    
Sbjct: 473 KMLLKGVKPNGVTFIGVLSACSRSGLVEKG---------CSYFHSMQQDHGIVLLDDHYT 523

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLG 262
           C +ID++ + S  L+ A +   +M    + +GW  +++ C   G
Sbjct: 524 C-MIDLYSR-SGRLKEAEEFIRQMPRCPDAIGWATLLSACRLRG 565


>gi|357453927|ref|XP_003597244.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355486292|gb|AES67495.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 678

 Score =  481 bits (1238), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 251/624 (40%), Positives = 369/624 (59%), Gaps = 5/624 (0%)

Query: 239 VFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           VF K  T  NT  +  MI          +A+ L+  M  +  +PD FT S V+ AC+ L 
Sbjct: 59  VFHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLN 118

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           LF  G  +HS   +TG   DV V  ++V  Y+KC   G + D+ KVFD M+  NV+SWT 
Sbjct: 119 LFHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKC---GFLRDAWKVFDDMVVKNVVSWTG 175

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +I G ++ G + +EAV LF  +++  + P+ F    VL+AC  L D      +     + 
Sbjct: 176 MICGCIEFG-KFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMREC 234

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G + +  V  SL+ MY + G ME+AR  F+ + EK++V ++ M+  YA N    +A EL 
Sbjct: 235 GLSRNVFVATSLVDMYTKCGSMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELF 294

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            E+    V    Y     LS  +S+GA+  G      +    F SN  +  +LI  Y++C
Sbjct: 295 FEMRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKC 354

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            ++E A  V+K M++++ + + ++I+G A +G    A  +F +M   GI PN  T++ +L
Sbjct: 355 GSMEEALGVYKMMKEKDRVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLL 414

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
             C+HAGL+ +G  +F SM  +  +   +EHY CMVDLL R+G L EA   I+ MP+ A+
Sbjct: 415 CGCTHAGLVDDGRHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKAN 474

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
           V+VW + LG CR+H +T+L +H  + ++E +P +   ++LLSN+Y+++  W+    IR  
Sbjct: 475 VIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASRRWDEAEKIRST 534

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
           + E+ + K  G SW+E D  VH+F VG+TSHP + +IY +L+ L   +KE GY P T FV
Sbjct: 535 VNEKGMQKLPGYSWVEVDGVVHEFLVGDTSHPLSQKIYEKLESLFKDLKEAGYNPTTEFV 594

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
           L ++EEE+K  +L  HSEK+AVAF LIST     IRV KNLRVCGDCH AIK+IS VTGR
Sbjct: 595 LFDVEEEEKEHFLGCHSEKLAVAFALISTGAKYVIRVVKNLRVCGDCHEAIKHISKVTGR 654

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           EIV+RD+NRFH   DG CSC DYW
Sbjct: 655 EIVIRDNNRFHCFSDGACSCRDYW 678



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 160/569 (28%), Positives = 273/569 (47%), Gaps = 26/569 (4%)

Query: 98  KLVHSLLTRSKLEPN----SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           KL H  L R  L  +    S+IL S I+  +   +      +F       +   +++MI 
Sbjct: 21  KLAHCRLLRLNLHHDNDLLSIILRSTINFSN---NAQYPILVFHKTPTNSNTFLYNTMIR 77

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
             V++ +  +A+H++  M +    P+ + FS V++AC+      +G +I+  + K G FD
Sbjct: 78  GMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNLFHLGVMIHSLVFKTG-FD 136

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
            DV V   ++  + K    L  A+KVFD M  KN V WT MI  C + G  R+A+ LF  
Sbjct: 137 CDVFVKTNVVCFYSKCGF-LRDAWKVFDDMVVKNVVSWTGMICGCIEFGKFREAVDLFRG 195

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           ++ SG  PD F +  V+ AC+ L    SG+ +       GL+ +V V  SLVDMY KC  
Sbjct: 196 LLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECGLSRNVFVATSLVDMYTKC-- 253

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            GS++++R VFD M++ +++ W+A+I GY  S G  +EA++LF +M +  V P+ +    
Sbjct: 254 -GSMEEARFVFDGMVEKDIVCWSAMIQGYA-SNGLPREAIELFFEMRKVNVRPDCYAMVG 311

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            L +C +L    +               +  +G SLI  YA+ G ME+A   ++ + EK+
Sbjct: 312 ALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKCGSMEEALGVYKMMKEKD 371

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
            V +N ++   A       AF +  ++   G+  + +TF  LL G +  G +  G   + 
Sbjct: 372 RVVFNAVISGLAMYGQVGAAFGVFGQMGKFGIPPNEHTFVGLLCGCTHAGLVDDGRH-YF 430

Query: 514 RIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGF 570
             +   F     I  Y  ++ + +R   ++ A  + K M  + NVI W S++ G   H  
Sbjct: 431 NSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGMPMKANVIVWGSLLGGCRLHRE 490

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A  +  +++   ++P    +  +LS    A    +  +  RS  +E G+ Q++  Y+
Sbjct: 491 TQLAEHVLKQLIE--LEPWNSGHYVLLSNIYSASRRWDEAEKIRSTVNEKGM-QKLPGYS 547

Query: 631 CM-VDLLGRSGSLTEALEFIRSMPLSADV 658
            + VD     G + E L    S PLS  +
Sbjct: 548 WVEVD-----GVVHEFLVGDTSHPLSQKI 571



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 134/494 (27%), Positives = 242/494 (48%), Gaps = 20/494 (4%)

Query: 36  FIAQPTTSEP-LSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F   PT S   L N +I  + +  R   A+     M +    PD  T+S +LK+C R   
Sbjct: 60  FHKTPTNSNTFLYNTMIRGMVSKDRFNNAVHLYASMHKAAIVPDSFTFSFVLKACARLNL 119

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           FHLG ++HSL+ ++  + +  +  +++  YSKCG L +A K+F  M  K ++VSW+ MI 
Sbjct: 120 FHLGVMIHSLVFKTGFDCDVFVKTNVVCFYSKCGFLRDAWKVFDDMVVK-NVVSWTGMIC 178

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
             +  GK  +A+ +F  +LE G  P+ +    V+RAC+   ++  G  I   + +CG   
Sbjct: 179 GCIEFGKFREAVDLFRGLLESGLRPDGFVIVRVLRACARLGDLESGRWIDRCMRECG-LS 237

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
            +V V  +L+DM+ K    +E A  VFD M EK+ V W+ MI      G PR+AI LF +
Sbjct: 238 RNVFVATSLVDMYTKCG-SMEEARFVFDGMVEKDIVCWSAMIQGYASNGLPREAIELFFE 296

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M      PD + + G +S+C+ L     G              +  +G SL+D YAKC  
Sbjct: 297 MRKVNVRPDCYAMVGALSSCASLGALELGNWAKGLMNYEEFLSNPVLGTSLIDFYAKC-- 354

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            GS++++  V+  M + + + + A+I+G     G+   A  +F  M +  + PN  TF  
Sbjct: 355 -GSMEEALGVYKMMKEKDRVVFNAVISGLAMY-GQVGAAFGVFGQMGKFGIPPNEHTFVG 412

Query: 394 VLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL 449
           +L  C    L+D     + Y +++    ++   + +   ++ + AR+G +++A    + +
Sbjct: 413 LLCGCTHAGLVDDG---RHYFNSMSHDFSVTPTIEHYGCMVDLLARAGFLDEAHNLIKGM 469

Query: 450 -FEKNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGK 507
             + N++ + +++     +  ++ A  +L + IE     +  Y   S +  AS      +
Sbjct: 470 PMKANVIVWGSLLGGCRLHRETQLAEHVLKQLIELEPWNSGHYVLLSNIYSASR--RWDE 527

Query: 508 GEQIHARIIKSGFE 521
            E+I + + + G +
Sbjct: 528 AEKIRSTVNEKGMQ 541


>gi|449460574|ref|XP_004148020.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g01510-like [Cucumis sativus]
          Length = 816

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 262/779 (33%), Positives = 443/779 (56%), Gaps = 10/779 (1%)

Query: 86  KSCIRSRNF-HLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +S  +  NF   G LVH+     ++   N++ LN +IS + K G L++A ++F  M  +R
Sbjct: 45  RSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGKLSKARELFDGMV-ER 103

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
             VSW+ +I  Y+   +  +A  ++ +M   G  P+      ++      E   +   I+
Sbjct: 104 TAVSWTILIGGYLQSNQSKEAFRLYADMRRGGIEPDYVTLVTLLSGFGELETKNVIVQIH 163

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             ++K GY + ++ V  +L+D + K    L  A ++F  M  K+TV +  ++T  +  G 
Sbjct: 164 THVIKLGY-EYNLMVCNSLVDAYCKTHC-LYLASQLFKHMLNKDTVTFNSLMTGYSNEGL 221

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +AI LFL++  SG  P  FT + ++SA   L+    G+Q+H + ++T    +V VG +
Sbjct: 222 NEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVFVGNA 281

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+D Y+K      VD+  K+F  M + + +S+  +IT Y  +G + KE+  LF  +   +
Sbjct: 282 LLDYYSK---HDQVDEVGKLFYEMPELDGISYNVVITSYAWNG-QFKESFDLFRKLQFTR 337

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
                F FA++L    + L+  +  Q++  A+  G   +  V N+L+ MYA+    ++A+
Sbjct: 338 FDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESRVENALVDMYAKCNGDKEAQ 397

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           K F+++  K+ V +  M+ AY +    E+   +  ++  TGV     TFAS+L   +++ 
Sbjct: 398 KIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLA 457

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           +I  G Q+H+ +I+SGF SN    +AL+  Y++C  +  A + F EM +RN +SW ++I+
Sbjct: 458 SISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMPERNSVSWNALIS 517

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
            +A++G     L  F +M+  G KP+ +++++VLSACSH G + E   HF SM   + + 
Sbjct: 518 AYAQNGNVDGTLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVT 577

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            + EHY  MVD+L R+G   EA + +  MP     ++W + L +CR+H + EL K AA+ 
Sbjct: 578 PKREHYTSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCRIHKNHELAKKAADR 637

Query: 684 ILE-QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
           +   +D +D A +I +SN+YA AG W+ VA ++K M++R + K    SW+E  ++ H F 
Sbjct: 638 LFNMEDLRDAAPYINMSNIYAVAGQWDNVAKVKKAMRDRGVRKVPAYSWVEIKHQTHVFS 697

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
             + SHP+  +I  +++ L+ ++++ GY PDT   LH+++E  K++ L  HSE+ A+AF 
Sbjct: 698 ANDKSHPEMKKILRKINALSKEMEKKGYKPDTTCALHDVDEVIKIESLKYHSERFAIAFA 757

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           L++T    PI V KNLR C DCH AIK IS +  REI++RDS+RFHH KDG CSC DYW
Sbjct: 758 LMNTPDGSPIVVMKNLRACTDCHAAIKVISQIVEREIIVRDSSRFHHFKDGVCSCGDYW 816



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 130/440 (29%), Positives = 226/440 (51%), Gaps = 26/440 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G  ++AI     +   G  P   T++ LL + +   +   G+ VH  + ++    N  
Sbjct: 218 NEGLNEEAIELFLELHNSGIKPSDFTFAALLSAAVGLDDTKFGQQVHGFVLKTNFVWNVF 277

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+  YSK   ++E  K+F  M  + D +S++ +I+SY   G+  ++  +F ++   
Sbjct: 278 VGNALLDYYSKHDQVDEVGKLFYEMP-ELDGISYNVVITSYAWNGQFKESFDLFRKLQFT 336

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDL 233
            F   ++ F+ ++   +++ N+ +G  I+   +  G  F+S   V  AL+DM+ K + D 
Sbjct: 337 RFDRRQFPFATLLSIATSSLNLRMGRQIHCQAITVGANFESR--VENALVDMYAKCNGDK 394

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A K+FD +  K+TV WT MI+   Q G   + I +F DM  +G   D+ T + ++ AC
Sbjct: 395 E-AQKIFDNIACKSTVPWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRAC 453

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + L   + G+QLHS  IR+G   +V  G +L+D YAKC   G + D+ K F  M + N +
Sbjct: 454 ANLASISLGRQLHSLLIRSGFMSNVYSGSALLDTYAKC---GCMTDAIKSFGEMPERNSV 510

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN-------LLDSNV 406
           SW A+I+ Y Q+G  D   +  F  MIQ    P+  +F SVL AC +       L   N 
Sbjct: 511 SWNALISAYAQNGNVDG-TLNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNS 569

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYA 465
             Q+Y    KR          S++ +  R+GR ++A K    + FE + + +++++++  
Sbjct: 570 MTQIYEVTPKREHY------TSMVDVLCRNGRFDEAEKLMTEMPFEPSEIMWSSVLNSCR 623

Query: 466 KNLNSE---KAFELLHEIED 482
            + N E   KA + L  +ED
Sbjct: 624 IHKNHELAKKAADRLFNMED 643



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/222 (27%), Positives = 110/222 (49%), Gaps = 17/222 (7%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P +  +  ++  G+ ++ I     M + G   D  T++ +L++C    +  LG+ +HSLL
Sbjct: 410 PWTAMISAYVQKGKHEEGINVFSDMRRTGVPADQATFASILRACANLASISLGRQLHSLL 469

Query: 105 TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
            RS    N    ++L+  Y+KCG + +A K F  M  +R+ VSW+++IS+Y   G     
Sbjct: 470 IRSGFMSNVYSGSALLDTYAKCGCMTDAIKSFGEMP-ERNSVSWNALISAYAQNGNVDGT 528

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENV--AIGHI-----IYGFLLKCGYFDSDVC 217
           ++ F +M++ G+ P+   F +V+ ACS+   V  A+ H      IY    K  ++ S V 
Sbjct: 529 LNSFQQMIQSGYKPDSVSFLSVLSACSHCGFVEEALWHFNSMTQIYEVTPKREHYTSMVD 588

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           V C        G  D   A K+  +M  E + + W+ ++  C
Sbjct: 589 VLCR------NGRFD--EAEKLMTEMPFEPSEIMWSSVLNSC 622



 Score = 48.1 bits (113), Expect = 0.018,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 8/132 (6%)

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           I A I+K+GF  N C  N  ++ +    ++  A QVF +M  +N IS   MI+G  K G 
Sbjct: 30  IDAHIVKTGFNPNTCRSNFQVNNFLERGDLVHAHQVFDQMPAKNTISLNMMISGHLKFGK 89

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
            ++A E+F  M    ++   +++  ++     +    E ++ +  M    G ++    Y 
Sbjct: 90  LSKARELFDGM----VERTAVSWTILIGGYLQSNQSKEAFRLYADM--RRGGIE--PDYV 141

Query: 631 CMVDLLGRSGSL 642
            +V LL   G L
Sbjct: 142 TLVTLLSGFGEL 153


>gi|224066034|ref|XP_002302000.1| predicted protein [Populus trichocarpa]
 gi|222843726|gb|EEE81273.1| predicted protein [Populus trichocarpa]
          Length = 797

 Score =  481 bits (1237), Expect = e-133,   Method: Compositional matrix adjust.
 Identities = 267/765 (34%), Positives = 417/765 (54%), Gaps = 80/765 (10%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M+  GF P  +  + +I   S +  +     ++  + +      D+     LI  +   +
Sbjct: 39  MIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQ-----PDIVARTTLIAAY-SAA 92

Query: 231 VDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            DL+ + K+F    +  +++V +  MIT  +       AI LF DM    F PD +T + 
Sbjct: 93  GDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTS 152

Query: 289 VVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS------VDDSR 341
           V+ A + + E     +QLH   +++G      V  +L+  Y KC    S      + ++R
Sbjct: 153 VLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVKCAASPSAQSSSLMAEAR 212

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDK------------------------------E 371
           K+FD M + + +SWT IITGYV++   D                               E
Sbjct: 213 KLFDEMPNRDELSWTTIITGYVKNNDLDAAKEFLNGTSKKLGVAWNAMISGYAHRGLYLE 272

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR-GRALDDC---VGN 427
           A ++F  MI  ++  + FTF SV+  C N     + ++++ + +K       D    V N
Sbjct: 273 AFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNN 332

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA-----------------KNLNS 470
           +LI+ Y + G+++ A++ F  + E++LVS+N ++  Y                  KN+ S
Sbjct: 333 ALITFYWKCGKVDIAQEIFNKMPERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILS 392

Query: 471 --------------EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
                         E+A +  + ++  G     Y FA  +   S +G++  G Q+HA+++
Sbjct: 393 WIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVV 452

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           + G+ES+    NALI+MY+RC  V+AA  +F  M   + ISW +MI    +HG   +A+E
Sbjct: 453 RYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIE 512

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +ML +GI P+ I+++ V+SACSHAGL+ EG K+F SM++ +G+    EHYA ++DLL
Sbjct: 513 LFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLL 572

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
            R+G  +EA E + SMP      +W   L  CR+HG+ +LG  AAE + E  PQ    ++
Sbjct: 573 CRAGKFSEAKEVMESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLFELKPQHDGTYV 632

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YA AG W  +A +RK M++R + KE GCSWIE +NKVH F VG+ +HP+  +IY 
Sbjct: 633 LLSNMYAVAGQWNDMAKVRKLMRDRGVKKEPGCSWIEVENKVHSFLVGDANHPEVRQIYN 692

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            L+QL L++++ GY+PDT  VLH++E + K   L  HSEK+AVA+G +       +RVFK
Sbjct: 693 YLEQLVLEMRKIGYVPDTKCVLHDVESDLKEHELSTHSEKLAVAYGFMKLPHGATVRVFK 752

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLR+CGDCH A K++S V GREIV+RD  RFHH +DGKCSC DYW
Sbjct: 753 NLRICGDCHNAFKFMSKVVGREIVVRDGKRFHHFRDGKCSCGDYW 797



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 147/605 (24%), Positives = 252/605 (41%), Gaps = 129/605 (21%)

Query: 82  SLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           SLL   C++S  ++ L + VH+ +  S  +P   ILN LI +YSK   LN A  +F  + 
Sbjct: 16  SLLQICCLQSPISYSLARPVHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIP 75

Query: 141 NK--------------------------------RDIVSWSSMISSYVNRGKQVDAIHMF 168
                                             RD V +++MI++Y +      AI +F
Sbjct: 76  QPDIVARTTLIAAYSAAGDLKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELF 135

Query: 169 VEMLELGFCPNEYCFSAVIRACS---------NTENVAIGHIIYGFL-----------LK 208
            +M    F P+ Y F++V+ A +            + A+     GF+           +K
Sbjct: 136 CDMQRDNFRPDNYTFTSVLGALALVAEKEKHCQQLHCAVVKSGTGFVTSVLNALISSYVK 195

Query: 209 CG----------------YFDS----DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           C                  FD     D      +I  +VK + DL++A +  +  ++K  
Sbjct: 196 CAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNN-DLDAAKEFLNGTSKKLG 254

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  MI+     G   +A  +F  MI+S    D FT + V+S C+    F  GK++H++
Sbjct: 255 VAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCANAGCFRLGKEMHAY 314

Query: 309 AIRT--GLALDVC--VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
            ++T    A DV   V  +L+  Y KC   G VD ++++F++M + +++SW  I++GYV 
Sbjct: 315 FLKTVANPAPDVAMPVNNALITFYWKC---GKVDIAQEIFNKMPERDLVSWNIILSGYVN 371

Query: 365 --------------------------SG----GRDKEAVKLFSDMIQGQVAPNHFTFASV 394
                                     SG    G  +EA+K F+ M      P  + FA  
Sbjct: 372 VRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQGFEPCDYAFAGA 431

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           + +C  L       Q++   V+ G       GN+LI+MYAR G ++ A   F ++   + 
Sbjct: 432 IISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARCGVVDAAHCLFINMPCVDA 491

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +S+N M+ A  ++    +A EL  E+   G+     +F +++S  S  G + +G +    
Sbjct: 492 ISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRISFLTVISACSHAGLVKEGRKY--- 548

Query: 515 IIKSGFESNHCIYNA---------LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
                F+S H +Y           +I +  R      A +V + M  +     W +++ G
Sbjct: 549 -----FDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKEVMESMPFEPGAPIWEALLAG 603

Query: 565 FAKHG 569
              HG
Sbjct: 604 CRIHG 608



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 213/485 (43%), Gaps = 108/485 (22%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSC--IRSRNFHLGKLVHSLLTRSKLE 110
           H +DG     +F    M +    PD  T++ +L +   +  +  H  +L H  + +S   
Sbjct: 124 HNHDGHAAIELFCD--MQRDNFRPDNYTFTSVLGALALVAEKEKHCQQL-HCAVVKSGTG 180

Query: 111 PNSVILNSLISLYSKCGD---------LNEANKIFKSMGNKRDI---------------- 145
             + +LN+LIS Y KC           + EA K+F  M N+ ++                
Sbjct: 181 FVTSVLNALISSYVKCAASPSAQSSSLMAEARKLFDEMPNRDELSWTTIITGYVKNNDLD 240

Query: 146 --------------VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
                         V+W++MIS Y +RG  ++A  MF +M+      +E+ F++VI  C+
Sbjct: 241 AAKEFLNGTSKKLGVAWNAMISGYAHRGLYLEAFEMFRKMIMSKIQLDEFTFTSVISVCA 300

Query: 192 NTENVAIGHIIYGFLLKC---GYFDSDVCVGCALIDMFVK-GSVD--------------- 232
           N     +G  ++ + LK       D  + V  ALI  + K G VD               
Sbjct: 301 NAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEIFNKMPERDLV 360

Query: 233 --------------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
                         ++ A   F++M EKN + W +MI+   Q+G   +A++ F  M L G
Sbjct: 361 SWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEALKFFNRMKLQG 420

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           F P  +  +G + +CS L     G+QLH+  +R G    +  G +L+ MYA+C   G VD
Sbjct: 421 FEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGYESSLSAGNALITMYARC---GVVD 477

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +  +F  M   + +SW A+I    Q  G+  +A++LF +M++  + P+  +F +V+ AC
Sbjct: 478 AAHCLFINMPCVDAISWNAMIAALGQH-GQGTQAIELFEEMLKEGILPDRISFLTVISAC 536

Query: 399 GNLLDSNVAEQVYTHA--VKRGRALDDCVGN------------SLISMYARSGRMEDARK 444
                        +HA  VK GR   D + N             +I +  R+G+  +A++
Sbjct: 537 -------------SHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRAGKFSEAKE 583

Query: 445 AFESL 449
             ES+
Sbjct: 584 VMESM 588



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 158/349 (45%), Gaps = 52/349 (14%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL----NSLISLYSKCGDLNEANKI 135
           T++ ++  C  +  F LGK +H+   ++   P   +     N+LI+ Y KCG ++ A +I
Sbjct: 291 TFTSVISVCANAGCFRLGKEMHAYFLKTVANPAPDVAMPVNNALITFYWKCGKVDIAQEI 350

Query: 136 FKSMGNKRDIVSWSSMISSYVNR-------------------------------GKQVDA 164
           F  M  +RD+VSW+ ++S YVN                                G   +A
Sbjct: 351 FNKM-PERDLVSWNIILSGYVNVRCMDEAKSFFNEMPEKNILSWIIMISGLAQIGFAEEA 409

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           +  F  M   GF P +Y F+  I +CS   ++  G  ++  +++ GY +S +  G ALI 
Sbjct: 410 LKFFNRMKLQGFEPCDYAFAGAIISCSVLGSLKHGRQLHAQVVRYGY-ESSLSAGNALIT 468

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ +  V +++A+ +F  M   + + W  MI    Q G    AI LF +M+  G LPDR 
Sbjct: 469 MYARCGV-VDAAHCLFINMPCVDAISWNAMIAALGQHGQGTQAIELFEEMLKEGILPDRI 527

Query: 285 TLSGVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           +   V+SACS   L   G++   S     G+  D      ++D+  +    G   ++++V
Sbjct: 528 SFLTVISACSHAGLVKEGRKYFDSMHNVYGVNPDEEHYARIIDLLCRA---GKFSEAKEV 584

Query: 344 FDRM-LDHNVMSWTAIITGYVQSGGRD---KEAVKLFSDMIQGQVAPNH 388
            + M  +     W A++ G    G  D   + A +LF      ++ P H
Sbjct: 585 MESMPFEPGAPIWEALLAGCRIHGNIDLGIEAAERLF------ELKPQH 627



 Score = 46.2 bits (108), Expect = 0.069,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 36/140 (25%)

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS---------- 560
           +HA +I SGF+    I N LI +YS+ + +  A  +F E+   ++++ T+          
Sbjct: 35  VHAHMIASGFQPRGHILNRLIDIYSKSSKLNYARYLFDEIPQPDIVARTTLIAAYSAAGD 94

Query: 561 -----------------------MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
                                  MIT ++ +     A+E+F  M  D  +P+  T+ +VL
Sbjct: 95  LKLSRKIFSDTPLGMRDSVFYNAMITAYSHNHDGHAAIELFCDMQRDNFRPDNYTFTSVL 154

Query: 598 SACSHAGLISEGWKHFRSMY 617
            A +   L++E  KH + ++
Sbjct: 155 GALA---LVAEKEKHCQQLH 171


>gi|356550971|ref|XP_003543853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 703

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 243/651 (37%), Positives = 395/651 (60%), Gaps = 7/651 (1%)

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           DSD+    +LI+++ K     + A K+FD+M ++N V W+ ++      G   + + LF 
Sbjct: 58  DSDITQINSLINLYSKCGQS-KCARKLFDRMLQRNVVSWSALMMGYLHKGEVLEVLGLFR 116

Query: 273 DMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           +++ L    P+ +  + V+S C++      GKQ H + +++GL L   V  +L+ MY++C
Sbjct: 117 NLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRC 176

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
                VD + ++ D +   +V S+ +I++  V+SG R  EA ++   M+   V  +  T+
Sbjct: 177 F---HVDSAMQILDTVPGDDVFSYNSILSALVESGCRG-EAAQVLKRMVDECVIWDSVTY 232

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            SVL  C  + D  +  Q++   +K G   D  V ++LI  Y + G + +ARK F+ L +
Sbjct: 233 VSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVFVSSTLIDTYGKCGEVLNARKQFDGLRD 292

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +N+V++  ++ AY +N + E+   L  ++E      + +TFA LL+  +S+ A+  G+ +
Sbjct: 293 RNVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLL 352

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H RI+ SGF+++  + NALI+MYS+  N+++++ VF  M +R+VI+W +MI G++ HG  
Sbjct: 353 HGRIVMSGFKNHLIVGNALINMYSKSGNIDSSYNVFSNMMNRDVITWNAMICGYSHHGLG 412

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
            +AL +F  M++ G  PN +T+I VLSAC H  L+ EG+ +F  +  +  +   +EHY C
Sbjct: 413 KQALLVFQDMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMKKFDVEPGLEHYTC 472

Query: 632 MVDLLGRSGSLTEALEFIRSMP-LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           MV LLGR+G L EA  F+++   +  DV+ WRT L AC +H +  LGK   E +++ DP 
Sbjct: 473 MVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQITETVIQMDPH 532

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D   + LLSN++A A  W+ V  IRK MKERN+ KE G SW++  N  H F    ++HP+
Sbjct: 533 DVGTYTLLSNMHAKARKWDGVVKIRKLMKERNIKKEPGASWLDIRNNTHVFVSEGSNHPE 592

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + +I+ ++ QL   IK  GY PD   VLH++E+EQK  YL  HSEK+A+A+GL+      
Sbjct: 593 STQIFEKVQQLLAMIKPLGYAPDVGVVLHDVEDEQKEGYLSHHSEKLALAYGLMKIPPPG 652

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           PIR+ KNLR+C DCH A+K IS  T R I++RD+NRFHH ++G C+CND+W
Sbjct: 653 PIRIIKNLRMCDDCHIAVKLISKATNRLIIVRDANRFHHFREGLCTCNDHW 703



 Score =  222 bits (565), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/496 (28%), Positives = 265/496 (53%), Gaps = 22/496 (4%)

Query: 84  LLKSCIRSRNFHLGKLVHS-LLTRSKLEPNSVI--LNSLISLYSKCGDLNEANKIFKSMG 140
           LLK    +++   GK +H+ L+ R++   +S I  +NSLI+LYSKCG    A K+F  M 
Sbjct: 29  LLKFSATAKSLRFGKTIHAQLVVRNQTSKDSDITQINSLINLYSKCGQSKCARKLFDRML 88

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENVAIG 199
            +R++VSWS+++  Y+++G+ ++ + +F  ++ L    PNEY F+ V+  C+++  V  G
Sbjct: 89  -QRNVVSWSALMMGYLHKGEVLEVLGLFRNLVSLDSAYPNEYIFTIVLSCCADSGRVKEG 147

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
              +G+LLK G       V  ALI M+ +    ++SA ++ D +   +   +  +++   
Sbjct: 148 KQCHGYLLKSGLLLHQY-VKNALIHMYSR-CFHVDSAMQILDTVPGDDVFSYNSILSALV 205

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           + GC  +A ++   M+    + D  T   V+  C+++     G Q+H+  ++TGL  DV 
Sbjct: 206 ESGCRGEAAQVLKRMVDECVIWDSVTYVSVLGLCAQIRDLQLGLQIHAQLLKTGLVFDVF 265

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  +L+D Y KC   G V ++RK FD + D NV++WTA++T Y+Q+ G  +E + LF+ M
Sbjct: 266 VSSTLIDTYGKC---GEVLNARKQFDGLRDRNVVAWTAVLTAYLQN-GHFEETLNLFTKM 321

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
                 PN FTFA +L AC +L+     + ++   V  G      VGN+LI+MY++SG +
Sbjct: 322 ELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGFKNHLIVGNALINMYSKSGNI 381

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + +   F ++  ++++++N M+  Y+ +   ++A  +  ++   G   +  TF  +LS  
Sbjct: 382 DSSYNVFSNMMNRDVITWNAMICGYSHHGLGKQALLVFQDMMSAGECPNYVTFIGVLSAC 441

Query: 500 SSIGAIGKG----EQIHARI-IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR- 553
             +  + +G    +QI  +  ++ G E     Y  ++++  R   ++ A    K      
Sbjct: 442 VHLALVQEGFYYFDQIMKKFDVEPGLEH----YTCMVALLGRAGLLDEAENFMKTTTQVK 497

Query: 554 -NVISWTSMITGFAKH 568
            +V++W +++     H
Sbjct: 498 WDVVAWRTLLNACHIH 513



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 225/440 (51%), Gaps = 27/440 (6%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           +L++    +P+   ++++L  C  S     GK  H  L +S L  +  + N+LI +YS+C
Sbjct: 117 NLVSLDSAYPNEYIFTIVLSCCADSGRVKEGKQCHGYLLKSGLLLHQYVKNALIHMYSRC 176

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
             ++ A +I  ++    D+ S++S++S+ V  G + +A  +   M++     +   + +V
Sbjct: 177 FHVDSAMQILDTVPGD-DVFSYNSILSALVESGCRGEAAQVLKRMVDECVIWDSVTYVSV 235

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           +  C+   ++ +G  I+  LLK G    DV V   LID + K   ++ +A K FD + ++
Sbjct: 236 LGLCAQIRDLQLGLQIHAQLLKTGLV-FDVFVSSTLIDTYGKCG-EVLNARKQFDGLRDR 293

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           N V WT ++T   Q G   + + LF  M L    P+ FT + +++AC+ L     G  LH
Sbjct: 294 NVVAWTAVLTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLH 353

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
              + +G    + VG +L++MY+K    G++D S  VF  M++ +V++W A+I GY    
Sbjct: 354 GRIVMSGFKNHLIVGNALINMYSK---SGNIDSSYNVFSNMMNRDVITWNAMICGYSHH- 409

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY-------THAVKRGR 419
           G  K+A+ +F DM+     PN+ TF  VL AC +L  + V E  Y          V+ G 
Sbjct: 410 GLGKQALLVFQDMMSAGECPNYVTFIGVLSACVHL--ALVQEGFYYFDQIMKKFDVEPGL 467

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEK--NLVSYNTMVDA--YAKNLNSEKAF- 474
               C    ++++  R+G +++A    ++  +   ++V++ T+++A    +N N  K   
Sbjct: 468 EHYTC----MVALLGRAGLLDEAENFMKTTTQVKWDVVAWRTLLNACHIHRNYNLGKQIT 523

Query: 475 ELLHEIEDTGVGTSAYTFAS 494
           E + +++   VGT  YT  S
Sbjct: 524 ETVIQMDPHDVGT--YTLLS 541



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 104/212 (49%), Gaps = 6/212 (2%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  +L +G  ++ +     M  +   P+  T+++LL +C        G L+H  +  S  
Sbjct: 302 LTAYLQNGHFEETLNLFTKMELEDTRPNEFTFAVLLNACASLVALAYGDLLHGRIVMSGF 361

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + + ++ N+LI++YSK G+++ +  +F +M N RD+++W++MI  Y + G    A+ +F 
Sbjct: 362 KNHLIVGNALINMYSKSGNIDSSYNVFSNMMN-RDVITWNAMICGYSHHGLGKQALLVFQ 420

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M+  G CPN   F  V+ AC +   V  G   +  ++K   FD +  +      + + G
Sbjct: 421 DMMSAGECPNYVTFIGVLSACVHLALVQEGFYYFDQIMK--KFDVEPGLEHYTCMVALLG 478

Query: 230 SVDLESAYKVFDKMTEK---NTVGWTLMITRC 258
              L    + F K T +   + V W  ++  C
Sbjct: 479 RAGLLDEAENFMKTTTQVKWDVVAWRTLLNAC 510


>gi|334185549|ref|NP_188908.2| uncharacterized protein [Arabidopsis thaliana]
 gi|332643144|gb|AEE76665.1| uncharacterized protein [Arabidopsis thaliana]
          Length = 938

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 268/799 (33%), Positives = 455/799 (56%), Gaps = 42/799 (5%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCG---DLNEANKIFKSMGNKRDIVSWSSMISS 154
           K+ H  LT+  L+ +   +  L++   + G    L+ A ++F++  +      ++S+I  
Sbjct: 49  KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y + G   +AI +F+ M+  G  P++Y F   + AC+ +     G  I+G ++K GY   
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYA-K 167

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+ V  +L+  + +   +L+SA KVFD+M+E+N V WT MI    +    +DA+ LF  M
Sbjct: 168 DLFVQNSLVHFYAECG-ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226

Query: 275 IL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           +      P+  T+  V+SAC++LE   +G++++++   +G+ ++  +  +LVDMY KC  
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN- 285

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
             ++D ++++FD     N+    A+ + YV+ G   +EA+ +F+ M+   V P+  +  S
Sbjct: 286 --AIDVAKRLFDEYGASNLDLCNAMASNYVRQG-LTREALGVFNLMMDSGVRPDRISMLS 342

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR------------------ 435
            + +C  L +    +  + + ++ G    D + N+LI MY +                  
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402

Query: 436 -------------SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE- 481
                        +G ++ A + FE++ EKN+VS+NT++    +    E+A E+   ++ 
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV     T  S+ S    +GA+   + I+  I K+G + +  +   L+ M+SRC + E
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           +A  +F  + +R+V +WT+ I   A  G A RA+E+F  M+  G+KP+G+ ++  L+ACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H GL+ +G + F SM   HG+     HY CMVDLLGR+G L EA++ I  MP+  + ++W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            + L ACRV G+ E+  +AAE I    P+   +++LLSN+YASAG W  +A +R  MKE+
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            L K  G S I+   K H+F  G+ SHP+   I A LD+++ +    G++PD + VL ++
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           +E++K+  L +HSEK+A+A+GLIS++K   IR+ KNLRVC DCH+  K+ S V  REI+L
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822

Query: 842 RDSNRFHHIKDGKCSCNDY 860
           RD+NRFH+I+ GKCSC D+
Sbjct: 823 RDNNRFHYIRQGKCSCGDF 841



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 156/566 (27%), Positives = 275/566 (48%), Gaps = 46/566 (8%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + + G   +AI     M   G  PD  T+   L +C +SR    G  +H L+ +     +
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGYAKD 168

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSL+  Y++CG+L+ A K+F  M ++R++VSW+SMI  Y  R    DA+ +F  M+
Sbjct: 169 LFVQNSLVHFYAECGELDSARKVFDEM-SERNVVSWTSMICGYARRDFAKDAVDLFFRMV 227

Query: 173 -ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            +    PN      VI AC+  E++  G  +Y F+   G   +D+ V  AL+DM++K + 
Sbjct: 228 RDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDMYMKCNA 286

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            ++ A ++FD+    N      M +   + G  R+A+ +F  M+ SG  PDR ++   +S
Sbjct: 287 -IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRISMLSAIS 345

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +CS+L     GK  H + +R G      +  +L+DMY KC      D + ++FDRM +  
Sbjct: 346 SCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ---DTAFRIFDRMSNKT 402

Query: 352 VMSWTAIITGYVQSGGRD------------------------------KEAVKLFSDM-I 380
           V++W +I+ GYV++G  D                              +EA+++F  M  
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           Q  V  +  T  S+  ACG+L   ++A+ +Y +  K G  LD  +G +L+ M++R G  E
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A   F SL  +++ ++   + A A   N+E+A EL  ++ + G+      F   L+  S
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582

Query: 501 SIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISW 558
             G + +G++I   ++K  G       Y  ++ +  R   +E A Q+ ++M  + N + W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642

Query: 559 TSMITGFAKHG------FAARALEIF 578
            S++      G      +AA  +++ 
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVL 668


>gi|297596302|ref|NP_001042337.2| Os01g0205200 [Oryza sativa Japonica Group]
 gi|56201494|dbj|BAD72991.1| pentatricopeptide repeat protein -like [Oryza sativa Japonica
           Group]
 gi|255672984|dbj|BAF04251.2| Os01g0205200 [Oryza sativa Japonica Group]
          Length = 658

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/663 (37%), Positives = 396/663 (59%), Gaps = 7/663 (1%)

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G +++G+L+K G F +   V  ALI  + K S  +E A  VFD+M +++ + W  +I  C
Sbjct: 3   GLVVHGYLVKYG-FGAQCAVCNALISFYAK-SNRIEDALMVFDEMPQRDIISWNSIIGGC 60

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
              G    A+ LF+ M L G   D  TL  V+ AC +      G  +H +++RTGL  + 
Sbjct: 61  ASNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISET 120

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +G +L+DMY+ C+       + K+F  M   NV+SWTA+IT Y ++G  DK A  LF +
Sbjct: 121 SLGNALLDMYSNCS---DWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVA-GLFQE 176

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    + P+ F   S L A          + V+ +A++ G      V N+L+ MY + G 
Sbjct: 177 MGLEGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKCGY 236

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ME+AR  F+ + +K+ +S+NT++  Y+++  + +AF L +E+    +  +A T A +L  
Sbjct: 237 MEEARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEML-LQLRPNAVTMACILPA 295

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
           A+S+ ++ +G ++HA  ++ G+  ++ + NAL+ MY +C  +  A ++F  + ++N+ISW
Sbjct: 296 AASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLISW 355

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           T MI G+  HG    A+ +F +M   GI+P+  ++ A+L ACSH+GL  EGW+ F +M +
Sbjct: 356 TIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMRN 415

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           EH I  +++HYACMVDLL  +G+L EA EFI +MP+  D  +W + L  CR+H + +L +
Sbjct: 416 EHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLAE 475

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
             AEM+ E +P++   ++LL+N+YA A  WE V  ++ ++  R L +  GCSWIE   K 
Sbjct: 476 KVAEMVFELEPENTGYYVLLANIYAEAERWEAVRKLKNKVGGRGLRENTGCSWIEVRGKA 535

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           H F     +HP+ + I   LD +A +++E G+ P   + L   ++    + L  HS K+A
Sbjct: 536 HIFFAENRNHPQGMRIAEFLDDVARRMQEEGHDPKKKYALMGADDAVHDEALCGHSSKLA 595

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           VAFG+++ S+ +PIRV KN RVC  CH A K+IS + GREI+LRDSNRFHH ++G+CSC 
Sbjct: 596 VAFGVLNLSQGRPIRVTKNSRVCSHCHEAAKFISKMCGREIILRDSNRFHHFEEGRCSCR 655

Query: 859 DYW 861
            YW
Sbjct: 656 GYW 658



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 152/540 (28%), Positives = 267/540 (49%), Gaps = 21/540 (3%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G +VH  L +        + N+LIS Y+K   + +A  +F  M  +RDI+SW+S+I    
Sbjct: 3   GLVVHGYLVKYGFGAQCAVCNALISFYAKSNRIEDALMVFDEM-PQRDIISWNSIIGGCA 61

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G    A+ +FV M   G   +     +V+ AC  +    IG +++G+ ++ G   S+ 
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLI-SET 120

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +G AL+DM+   S D  S  K+F  M +KN V WT MIT  T+ G       LF +M L
Sbjct: 121 SLGNALLDMYSNCS-DWRSTNKIFRNMEQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGL 179

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
            G  PD F ++  + A +  E    GK +H +AIR G+   + V  +L++MY KC   G 
Sbjct: 180 EGIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNGIEEVLPVANALMEMYVKC---GY 236

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           ++++R +FD +   + +SW  +I GY +S     EA  LF++M+  Q+ PN  T A +L 
Sbjct: 237 MEEARFIFDHVTKKDTISWNTLIGGYSRS-NLANEAFTLFNEMLL-QLRPNAVTMACILP 294

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           A  +L       +++ +AV+RG   D+ V N+L+ MY + G +  AR+ F+ L  KNL+S
Sbjct: 295 AAASLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKCGALLLARRLFDMLTNKNLIS 354

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARI 515
           +  M+  Y  +     A  L  +++ +G+   A +F+++L   S  G   +G +  +A  
Sbjct: 355 WTIMIAGYGMHGRGRDAIALFEQMKGSGIQPDAGSFSAILYACSHSGLRDEGWRFFNAMR 414

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH---GFA 571
            +   E     Y  ++ +     N++ A++  + M  + +   W S++ G   H     A
Sbjct: 415 NEHRIEPKLKHYACMVDLLCHTGNLKEAYEFIETMPIEPDSSIWVSLLRGCRIHRNVKLA 474

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
            +  E+ +++     +P    Y  +L+        +E W+  R + ++ G     E+  C
Sbjct: 475 EKVAEMVFEL-----EPENTGYYVLLANIYAE---AERWEAVRKLKNKVGGRGLRENTGC 526



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 103/344 (29%), Positives = 192/344 (55%), Gaps = 8/344 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G   KA+     M  +G   D  T   ++ +C++S    +G +VH    R+ L   + 
Sbjct: 62  SNGLYDKAVELFVRMWLEGQELDSTTLLSVMPACVQSHYSFIGGVVHGYSVRTGLISETS 121

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+L+ +YS C D    NKIF++M  ++++VSW++MI+SY   G       +F EM   
Sbjct: 122 LGNALLDMYSNCSDWRSTNKIFRNM-EQKNVVSWTAMITSYTRAGHFDKVAGLFQEMGLE 180

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+ +  ++ + A +  E++  G  ++G+ ++ G  +  + V  AL++M+VK    +E
Sbjct: 181 GIRPDVFAITSALDAFAGNESLKHGKSVHGYAIRNG-IEEVLPVANALMEMYVKCGY-ME 238

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +FD +T+K+T+ W  +I   ++     +A  LF +M+L    P+  T++ ++ A +
Sbjct: 239 EARFIFDHVTKKDTISWNTLIGGYSRSNLANEAFTLFNEMLLQ-LRPNAVTMACILPAAA 297

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L     G+++H++A+R G   D  V  +LVDMY KC   G++  +R++FD + + N++S
Sbjct: 298 SLSSLERGREMHAYAVRRGYLEDNFVANALVDMYVKC---GALLLARRLFDMLTNKNLIS 354

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           WT +I GY    GR ++A+ LF  M    + P+  +F+++L AC
Sbjct: 355 WTIMIAGYGMH-GRGRDAIALFEQMKGSGIQPDAGSFSAILYAC 397


>gi|297734304|emb|CBI15551.3| unnamed protein product [Vitis vinifera]
          Length = 685

 Score =  481 bits (1237), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/734 (36%), Positives = 406/734 (55%), Gaps = 93/734 (12%)

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           +L  A  +F  M  +RD+VSW++M+S Y   G   +A  +F EM     C N   ++ ++
Sbjct: 45  NLRAARLLFDQM-PERDVVSWNAMLSGYAQNGYVKEAKEIFDEMP----CKNSISWNGML 99

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            A      V  G I     L     D ++     ++  +VK +  L  A  +FD+M E++
Sbjct: 100 AAY-----VQNGRIEDARRLFESKADWELISWNCMMGGYVKRN-RLVDARGIFDRMPERD 153

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  MI+   Q G   +A RLF +  +     D FT + +VS   +            
Sbjct: 154 EVSWNTMISGYAQNGELLEAQRLFEESPVR----DVFTWTAMVSGYVQ------------ 197

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
                                     +G +D++R+VFD M + N +SW AII GYVQ   
Sbjct: 198 --------------------------NGMLDEARRVFDGMPEKNSVSWNAIIAGYVQCKR 231

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            D +A +LF  M                  C N+                         N
Sbjct: 232 MD-QARELFEAM-----------------PCQNV----------------------SSWN 251

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           ++I+ YA++G +  AR  F+ + +++ +S+  ++  YA++   E+A  L  E++  G   
Sbjct: 252 TMITGYAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERL 311

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           +  TF S LS  + I A+  G+Q+H R++K+G ES   + NAL+ MY +C N++ A+ VF
Sbjct: 312 NRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKCGNIDDAYIVF 371

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           + +E++ V+SW +MI G+A+HGF   AL +F  M   GI P+ +T + VLSACSH GL+ 
Sbjct: 372 EGIEEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVD 431

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +G ++F SM  ++GI    +HY CM+DLLGR+G L +A   +++MP   D   W   LGA
Sbjct: 432 KGTEYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 491

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
            R+HG+TELG+ AA+MI E +P +   ++LLSNLYA++G W  V  +R RM++R + K  
Sbjct: 492 SRIHGNTELGEKAAKMIFEMEPDNSGMYVLLSNLYAASGRWGDVGRMRLRMRDRGVKKVP 551

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
           G SW+E  NK+H F VG++ HP+   IY  L++L LK+K+ GY+  T  VLH++EEE+KV
Sbjct: 552 GYSWVEVQNKIHTFTVGDSVHPERDRIYTFLEELDLKMKKEGYVSSTKLVLHDVEEEEKV 611

Query: 788 QYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRF 847
             L  HSEK+AVAFG+++    +PIRV KNLRVC DCH A+K+IS + GR I+LRDS+RF
Sbjct: 612 HMLKYHSEKLAVAFGILAIPAGRPIRVIKNLRVCEDCHNAMKHISKIVGRLIILRDSHRF 671

Query: 848 HHIKDGKCSCNDYW 861
           HH   G+CSC DYW
Sbjct: 672 HHFNGGQCSCGDYW 685



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 201/408 (49%), Gaps = 31/408 (7%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E + V  N++IS Y++ G+L EA ++F+     RD+ +W++M+S YV  G   +A  +F 
Sbjct: 151 ERDEVSWNTMISGYAQNGELLEAQRLFEE-SPVRDVFTWTAMVSGYVQNGMLDEARRVFD 209

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M E     N   ++A+I      + +     +         F++  C   +  +  + G
Sbjct: 210 GMPE----KNSVSWNAIIAGYVQCKRMDQAREL---------FEAMPCQNVSSWNTMITG 256

Query: 230 SV---DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
                D+  A   FD+M +++++ W  +I    Q G   +A+ LF++M   G   +R T 
Sbjct: 257 YAQNGDIAQARNFFDRMPQRDSISWAAIIAGYAQSGYGEEALHLFVEMKRDGERLNRSTF 316

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           +  +S C+E+     GKQ+H   ++ GL     VG +L+ MY KC   G++DD+  VF+ 
Sbjct: 317 TSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVGNALLVMYCKC---GNIDDAYIVFEG 373

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDS 404
           + +  V+SW  +I GY +  G  KEA+ LF  M +  + P+  T   VL AC +  L+D 
Sbjct: 374 IEEKEVVSWNTMIAGYARH-GFGKEALMLFESMKKTGILPDDVTMVGVLSACSHTGLVDK 432

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
              E  Y+     G   +      +I +  R+GR++DA+   +++ FE +  ++  ++ A
Sbjct: 433 GT-EYFYSMTQDYGITANSKHYTCMIDLLGRAGRLDDAQNLMKNMPFEPDAATWGALLGA 491

Query: 464 YAKNLNS---EKAFELLHEIEDTGVGTSAYTFASLLSGASS-IGAIGK 507
              + N+   EKA +++ E+E    G   Y   S L  AS   G +G+
Sbjct: 492 SRIHGNTELGEKAAKMIFEMEPDNSGM--YVLLSNLYAASGRWGDVGR 537



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 71/321 (22%), Positives = 145/321 (45%), Gaps = 32/321 (9%)

Query: 370 KEAVKLFSDMIQGQVAPN-HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           K  ++L S  +Q   +P   F     L+ C    +   A  ++    +R    D    N+
Sbjct: 11  KRTMRLRSPPLQLHASPEFDFLERHDLRGCVRYRNLRAARLLFDQMPER----DVVSWNA 66

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           ++S YA++G +++A++ F+ +  KN +S+N M+ AY +N   E A  L     D      
Sbjct: 67  MLSGYAQNGYVKEAKEIFDEMPCKNSISWNGMLAAYVQNGRIEDARRLFESKADW----- 121

Query: 489 AYTFASLLSGASSIGA-IGKGEQIHAR-IIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
                 L+S    +G  + +   + AR I     E +   +N +IS Y++   +  A ++
Sbjct: 122 -----ELISWNCMMGGYVKRNRLVDARGIFDRMPERDEVSWNTMISGYAQNGELLEAQRL 176

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI-KPNGITYIAVLSACSHAGL 605
           F+E   R+V +WT+M++G+ ++G    A  +F     DG+ + N +++ A+++       
Sbjct: 177 FEESPVRDVFTWTAMVSGYVQNGMLDEARRVF-----DGMPEKNSVSWNAIIAGYVQCKR 231

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + +  + F +M       Q +  +  M+    ++G + +A  F   MP   D + W   +
Sbjct: 232 MDQARELFEAM-----PCQNVSSWNTMITGYAQNGDIAQARNFFDRMP-QRDSISWAAII 285

Query: 666 GACRVHGDTELGKHAAEMILE 686
                +  +  G+ A  + +E
Sbjct: 286 AG---YAQSGYGEEALHLFVE 303



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/143 (28%), Positives = 78/143 (54%), Gaps = 1/143 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M + G   +  T++  L +C       LGK VH  + ++ LE    + 
Sbjct: 292 GYGEEALHLFVEMKRDGERLNRSTFTSTLSTCAEIAALELGKQVHGRVVKAGLESGCYVG 351

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+ +Y KCG++++A  +F+ +  ++++VSW++MI+ Y   G   +A+ +F  M + G 
Sbjct: 352 NALLVMYCKCGNIDDAYIVFEGI-EEKEVVSWNTMIAGYARHGFGKEALMLFESMKKTGI 410

Query: 177 CPNEYCFSAVIRACSNTENVAIG 199
            P++     V+ ACS+T  V  G
Sbjct: 411 LPDDVTMVGVLSACSHTGLVDKG 433



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 86/190 (45%), Gaps = 15/190 (7%)

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           R  N+ AA  +F +M +R+V+SW +M++G+A++G+   A EIF +M       N I++  
Sbjct: 42  RYRNLRAARLLFDQMPERDVVSWNAMLSGYAQNGYVKEAKEIFDEMPC----KNSISWNG 97

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L+A    G I +  + F S  D   I      + CM+    +   L +A      MP  
Sbjct: 98  MLAAYVQNGRIEDARRLFESKADWELI-----SWNCMMGGYVKRNRLVDARGIFDRMP-E 151

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASAGHWEYVANI 714
            D + W T +     +G+       A+ + E+ P +D      + + Y   G  +    +
Sbjct: 152 RDEVSWNTMISGYAQNGEL----LEAQRLFEESPVRDVFTWTAMVSGYVQNGMLDEARRV 207

Query: 715 RKRMKERNLI 724
              M E+N +
Sbjct: 208 FDGMPEKNSV 217


>gi|356503769|ref|XP_003520676.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Glycine max]
          Length = 874

 Score =  480 bits (1236), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 292/823 (35%), Positives = 461/823 (56%), Gaps = 51/823 (6%)

Query: 79  DTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           +++SLL  L    RS + HL K VH+ L +   E ++ + N+LIS Y K      A ++F
Sbjct: 63  ESHSLLHALHVSSRSGDTHLAKTVHATLLKRD-EEDTHLSNALISTYLKLNLFPHALRLF 121

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNT-E 194
            S+ +  ++VS++++IS ++++ +Q  A+H+F+ M       PNEY + AV+ ACS+   
Sbjct: 122 LSLPSP-NVVSYTTLIS-FLSKHRQHHALHLFLRMTTRSHLPPNEYTYVAVLTACSSLLH 179

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           +   G  ++   LK  +FDS   V  AL+ ++ K +    +A K+F+++  ++   W  +
Sbjct: 180 HFHFGLQLHAAALKTAHFDSPF-VANALVSLYAKHA-SFHAALKLFNQIPRRDIASWNTI 237

Query: 255 ITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           I+   Q      A RLF +M  +  F  D FTLS +++A + L     G+Q+H+ A++ G
Sbjct: 238 ISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTASASL---MEGQQVHAHAVKLG 294

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG------- 366
           L  D+ VG  L+  Y+K    G+VDD   +F+ M   +V++WT ++T Y++ G       
Sbjct: 295 LETDLNVGNGLIGFYSKF---GNVDDVEWLFEGMRVRDVITWTEMVTAYMEFGLVNLALK 351

Query: 367 -----------------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
                                   +  EA++LF  M++  +    F+  SV+ ACG L D
Sbjct: 352 VFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVDACGLLGD 411

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF--ESLFEKNLVSYNTMV 461
             V++QV+  AVK G   +  V  +L+ MY R GRM DA K F    L E + V +  M+
Sbjct: 412 YKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRCGRMVDAGKMFLRWELEEFSSVVWTAMI 471

Query: 462 DAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
             YA+N   E+A  L H     G V       AS+L    +IG +  G+QIH  +IK G 
Sbjct: 472 CGYARNGQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGKQIHCHVIKCGL 531

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
             N  + NA++SMY +C +V+ A +VF +M   ++++W ++I+G   H    RALEI+ +
Sbjct: 532 GFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHRQGDRALEIWVE 591

Query: 581 MLADGIKPNGITYIAVLSAC--SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
           ML +GIKPN +T++ ++SA   ++  L+ +    F SM   + I     HYA  + +LG 
Sbjct: 592 MLGEGIKPNQVTFVLIISAYRQTNLNLVDDCRNLFNSMRTVYQIEPTSRHYASFISVLGH 651

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
            G L EALE I +MP     LVWR  L  CR+H +  +GK AA+ IL  +P+DP+  IL+
Sbjct: 652 WGLLQEALETINNMPFQPSALVWRVLLDGCRLHKNELIGKWAAQNILALEPKDPSTFILV 711

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SNLY+++G W+    +R+ M+E+   K    SWI  + K++ F+  + SHP+  +I   L
Sbjct: 712 SNLYSASGRWDRSEMVREDMREKGFRKHPAQSWIVCEKKINSFYPRDRSHPQEKDIQRGL 771

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
           + L L+  + GY PDT+FVLHE+EE  K  +LF HS K+A  +G++ T   KPIR+ KN+
Sbjct: 772 EILILECLKIGYEPDTSFVLHEVEEHHKKIFLFHHSAKLAATYGILMTKPGKPIRIVKNI 831

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +CGDCH  +KY S+VT R+I LRDS+ FH   +G+CSC D W
Sbjct: 832 LLCGDCHAFLKYASIVTKRDIFLRDSSGFHCFSNGQCSCKDCW 874



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 138/510 (27%), Positives = 256/510 (50%), Gaps = 45/510 (8%)

Query: 25  RQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLD-TYSL 83
           + NL P +   F++ P+ +      LI  L+  R   A+     MT + + P  + TY  
Sbjct: 110 KLNLFPHALRLFLSLPSPNVVSYTTLISFLSKHRQHHALHLFLRMTTRSHLPPNEYTYVA 169

Query: 84  LLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           +L +C     +FH G  +H+   ++    +  + N+L+SLY+K    + A K+F  +  +
Sbjct: 170 VLTACSSLLHHFHFGLQLHAAALKTAHFDSPFVANALVSLYAKHASFHAALKLFNQIP-R 228

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHI 201
           RDI SW+++IS+ +       A  +F  M     F  +++  S ++ A   + ++  G  
Sbjct: 229 RDIASWNTIISAALQDSLYDTAFRLFRNMQATDAFRVDDFTLSILLTA---SASLMEGQQ 285

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD-------------------LESAY---- 237
           ++   +K G  ++D+ VG  LI  + K G+VD                   + +AY    
Sbjct: 286 VHAHAVKLG-LETDLNVGNGLIGFYSKFGNVDDVEWLFEGMRVRDVITWTEMVTAYMEFG 344

Query: 238 ------KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
                 KVFD+M EKN+V +  ++    +     +A+RLF+ M+  G     F+L+ VV 
Sbjct: 345 LVNLALKVFDEMPEKNSVSYNTVLAGFCRNEQGFEAMRLFVRMVEEGLELTDFSLTSVVD 404

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR--MLD 349
           AC  L  +   KQ+H +A++ G   +  V  +L+DMY +C   G + D+ K+F R  + +
Sbjct: 405 ACGLLGDYKVSKQVHGFAVKFGFGSNGYVEAALLDMYTRC---GRMVDAGKMFLRWELEE 461

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFS-DMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
            + + WTA+I GY ++ G+ +EA+ LF      G+V  +    AS+L  CG +   ++ +
Sbjct: 462 FSSVVWTAMICGYARN-GQPEEAIYLFHVGRSDGKVIMDEVAAASMLGLCGTIGHLDMGK 520

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++ H +K G   +  VGN+++SMY + G ++DA K F  +   ++V++NT++     + 
Sbjct: 521 QIHCHVIKCGLGFNLEVGNAVVSMYFKCGSVDDAMKVFGDMPCTDIVTWNTLISGNLMHR 580

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
             ++A E+  E+   G+  +  TF  ++S 
Sbjct: 581 QGDRALEIWVEMLGEGIKPNQVTFVLIISA 610


>gi|115471325|ref|NP_001059261.1| Os07g0239600 [Oryza sativa Japonica Group]
 gi|33146689|dbj|BAC80084.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|50510012|dbj|BAD30625.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113610797|dbj|BAF21175.1| Os07g0239600 [Oryza sativa Japonica Group]
          Length = 720

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 247/660 (37%), Positives = 380/660 (57%), Gaps = 37/660 (5%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACS 294
           A  VFD+   +    WTL I+ C + G   D +R F +M+  G   P+ F L+ VV  C+
Sbjct: 64  ARGVFDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCA 123

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            +    SGK++H W +R G+ LDV +  +++DMYAKC   G  + +R+VF  M + + +S
Sbjct: 124 GMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKC---GQFERARRVFGAMAERDAVS 180

Query: 355 WTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQGQV 384
           W   I   +QSG                              G   +A+     M Q  V
Sbjct: 181 WNIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGV 240

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
             NH+T+++     G LL  ++  Q++   +      D  V +SL+ MY + G +E A  
Sbjct: 241 VFNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAAS 300

Query: 445 AFE--SLFEKNL-VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
            F+  S   +++  +++TMV  Y +N   E+A +L   +   GV    +T  S+ +  ++
Sbjct: 301 VFDHWSPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACAN 360

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +G + +G Q+H  + K  ++ +  + +A++ MY++C N+E A  +F     +N+  WTSM
Sbjct: 361 VGMVEQGRQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARSIFDRACTKNIAVWTSM 420

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           +  +A HG    A+E+F +M A+ + PN IT + VLSACSH GL+SEG  +F+ M +E+G
Sbjct: 421 LCSYASHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHVGLVSEGELYFKQMQEEYG 480

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           IV  +EHY C+VDL GRSG L +A  FI    ++ + +VW+T L ACR+H   E  K A+
Sbjct: 481 IVPSIEHYNCIVDLYGRSGLLDKAKNFIEENNINHEAIVWKTLLSACRLHQHNEYAKLAS 540

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           E +++ +  D  ++++LSN+YA+   W     +R  M+ER + K+ G SWI   N VH F
Sbjct: 541 EKLVQLEQCDAGSYVMLSNIYATNNKWHDTFELRVSMQERKVRKQPGRSWIHLKNTVHTF 600

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
             G+ SHP++ EIYA L++L  ++KE GY   T+ V+H++E+EQ+   L  HSEK+A+AF
Sbjct: 601 VAGDASHPQSAEIYAYLEKLVERLKEIGYTSRTDLVVHDVEDEQRETALKFHSEKLAIAF 660

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           G+IST    P+R+FKNLRVC DCH AIKYIS+ TGREIV+RD  RFHH KD  CSC D+W
Sbjct: 661 GIISTPSGTPLRIFKNLRVCEDCHEAIKYISLATGREIVVRDLYRFHHFKDASCSCEDFW 720



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 224/491 (45%), Gaps = 62/491 (12%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNH-PDLDTYSLLLKSCIRSRN 93
           F  +PT + P+    I      GR    +     M  +G   P+    + +++ C    +
Sbjct: 68  FDERPTRTAPVWTLTISGCARRGRYADGMRAFAEMLAEGEATPNAFVLAAVVRCCAGMGD 127

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK----------- 142
              GK VH  + R+ +  + V+ N+++ +Y+KCG    A ++F +M  +           
Sbjct: 128 VESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSWNIAIGA 187

Query: 143 -------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
                              RD  SW+++IS  +  G   DA+     M + G   N Y +
Sbjct: 188 CIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVVFNHYTY 247

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK- 242
           S             +G  ++G +L     + D  V  +L+DM+ K  + LE+A  VFD  
Sbjct: 248 STAFVLAGMLLLPDLGRQLHGRVL-IAALEGDAFVRSSLMDMYCKCGL-LEAAASVFDHW 305

Query: 243 --MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
             +T      W+ M+    Q G   +A+ LF  M+  G   DRFTL+ V +AC+ + +  
Sbjct: 306 SPLTRDMNFAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACANVGMVE 365

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+Q+H    +    LD  +  ++VDMYAKC   G+++D+R +FDR    N+  WT+++ 
Sbjct: 366 QGRQVHGCVEKLWYKLDAPLASAIVDMYAKC---GNLEDARSIFDRACTKNIAVWTSMLC 422

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE-QVYTHAVKRGR 419
            Y  S G+ + A++LF  M   ++ PN  T   VL AC ++    V+E ++Y   ++   
Sbjct: 423 SYA-SHGQGRIAIELFERMTAEKMTPNEITLVGVLSACSHV--GLVSEGELYFKQMQEEY 479

Query: 420 ALDDCVG--NSLISMYARSGRMEDARKAFESLFEKNL----VSYNTMVDA--------YA 465
            +   +   N ++ +Y RSG ++ A+   E   E N+    + + T++ A        YA
Sbjct: 480 GIVPSIEHYNCIVDLYGRSGLLDKAKNFIE---ENNINHEAIVWKTLLSACRLHQHNEYA 536

Query: 466 KNLNSEKAFEL 476
           K L SEK  +L
Sbjct: 537 K-LASEKLVQL 546



 Score =  142 bits (359), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 183/381 (48%), Gaps = 52/381 (13%)

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKA 397
           D+R VFD         WT  I+G  +  GR  + ++ F++M+ +G+  PN F  A+V++ 
Sbjct: 63  DARGVFDERPTRTAPVWTLTISGCARR-GRYADGMRAFAEMLAEGEATPNAFVLAAVVRC 121

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV-- 455
           C  + D    ++V+   ++ G  LD  + N+++ MYA+ G+ E AR+ F ++ E++ V  
Sbjct: 122 CAGMGDVESGKRVHGWMLRNGVHLDVVLCNAVLDMYAKCGQFERARRVFGAMAERDAVSW 181

Query: 456 -----------------------------SYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
                                        S+NT++    ++ ++  A   L  +   GV 
Sbjct: 182 NIAIGACIQSGDILGSMQLFDESPLRDTTSWNTIISGLMRSGHAADALSHLRRMAQAGVV 241

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + YT+++    A  +     G Q+H R++ +  E +  + ++L+ MY +C  +EAA  V
Sbjct: 242 FNHYTYSTAFVLAGMLLLPDLGRQLHGRVLIAALEGDAFVRSSLMDMYCKCGLLEAAASV 301

Query: 547 FKE----MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           F        D N  +W++M+ G+ ++G    AL++F +ML +G+  +  T  +V +AC++
Sbjct: 302 FDHWSPLTRDMN-FAWSTMVAGYVQNGREEEALDLFRRMLREGVAADRFTLTSVAAACAN 360

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEH------YACMVDLLGRSGSLTEALEFIRSMPLSA 656
            G++ +G          HG V+++ +       + +VD+  + G+L +A   I     + 
Sbjct: 361 VGMVEQG-------RQVHGCVEKLWYKLDAPLASAIVDMYAKCGNLEDARS-IFDRACTK 412

Query: 657 DVLVWRTFLGACRVHGDTELG 677
           ++ VW + L +   HG   + 
Sbjct: 413 NIAVWTSMLCSYASHGQGRIA 433


>gi|49333376|gb|AAT64016.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 259/791 (32%), Positives = 427/791 (53%), Gaps = 79/791 (9%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           K +  +  TYS +L+ C   ++F  GK VHS++  + +  +  +   L+S Y+ CGDL E
Sbjct: 93  KKSELETKTYSSVLQLCAGLKSFTDGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKE 152

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
             ++F +M  K+++  W+ M+S Y                                    
Sbjct: 153 GRRVFDTM-EKKNVYLWNFMVSEYA----------------------------------- 176

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
                           K G F   +C+   +++  ++G    ESA+++FDK+ +++ + W
Sbjct: 177 ----------------KIGDFKESICLFKIMVEKGIEGKRP-ESAFELFDKLCDRDVISW 219

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
             MI+     G     + ++  M+  G   D  T+  V+  C+     + GK +HS AI+
Sbjct: 220 NSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIK 279

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           +     +    +L+DMY+KC   G +D + +VF++M + NV+SWT++I GY + G R   
Sbjct: 280 SSFERRINFSNTLLDMYSKC---GDLDGALRVFEKMGERNVVSWTSMIAGYTRDG-RSDG 335

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A+KL   M +  V  +     S+L AC      +  + V+ +        +  V N+L+ 
Sbjct: 336 AIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMESNLFVCNALMD 395

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYA+ G ME A   F ++  K+++S+NTM+     +                     + T
Sbjct: 396 MYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPD---------------------SRT 434

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            A +L   +S+ A+ +G++IH  I+++G+ S+  + NAL+ +Y +C  +  A  +F  + 
Sbjct: 435 MACVLPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 494

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            ++++SWT MI G+  HG+   A+  F +M   GI+P+ +++I++L ACSH+GL+ +GW+
Sbjct: 495 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 554

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
            F  M ++  I  ++EHYACMVDLL R+G+L++A EFI ++P++ D  +W   L  CR +
Sbjct: 555 FFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEFIETLPIAPDATIWGALLCGCRNY 614

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            D EL +  AE + E +P++   ++LL+N+YA A  WE V  +R+++ ++ L K  GCSW
Sbjct: 615 HDIELAEKVAERVFELEPENSGYYVLLANIYAEAEKWEEVKRLREKIGKQGLRKNPGCSW 674

Query: 732 IEADNKVHKFHVG-ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYL 790
           IE   KV+ F  G  +SHP +  I + L ++  K+KE G+ P T + L   +E QK   L
Sbjct: 675 IEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKEEGHFPKTKYALINADEMQKEMAL 734

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
             HSEK+A+AFGL++    K IRV KNLRVCGDCH   K++S  T REIVLRD NRFHH 
Sbjct: 735 CGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRREIVLRDPNRFHHF 794

Query: 851 KDGKCSCNDYW 861
           KDG CSC  +W
Sbjct: 795 KDGYCSCRGFW 805



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 138/505 (27%), Positives = 233/505 (46%), Gaps = 81/505 (16%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G  ++ +     M   G   DL T   +L  C  S    LGK VHSL  +S  E  
Sbjct: 226 YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERR 285

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+L+ +YSKCGDL+ A ++F+ MG +R++VSW+SMI+ Y   G+   AI +  +M 
Sbjct: 286 INFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGRSDGAIKLLQQME 344

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G   +    ++++ AC+ + ++  G  ++ + +K    +S++ V  AL+DM+ K GS 
Sbjct: 345 KEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNMESNLFVCNALMDMYAKCGS- 402

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E+A  VF  M  K+ + W  MI                         PD  T++ V+ 
Sbjct: 403 -MEAANSVFSTMVVKDIISWNTMIGE---------------------LKPDSRTMACVLP 440

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ L     GK++H + +R G + D  V  +LVD+Y KC V G    +R +FD +   +
Sbjct: 441 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL---ARLLFDMIPSKD 497

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SWT +I GY    G   EA+  F++M    + P+  +F S+L AC             
Sbjct: 498 LVSWTVMIAGYGMH-GYGNEAIATFNEMRDAGIEPDEVSFISILYAC------------- 543

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAK 466
                                 + SG +E   + F  +      E  L  Y  MVD  ++
Sbjct: 544 ----------------------SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 581

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             N  KA+E    IE   +   A  + +LL G  +   I   E++  R+ +   E  +  
Sbjct: 582 TGNLSKAYEF---IETLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFE--LEPENSG 636

Query: 527 YNALISMYSRCANVEAAFQVFKEME 551
           Y  L+      AN+ A  + ++E++
Sbjct: 637 YYVLL------ANIYAEAEKWEEVK 655



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 177/378 (46%), Gaps = 68/378 (17%)

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           R +DH V  + A I  + Q G  +  A++L     + ++     T++SVL+ C  L    
Sbjct: 60  RTIDHQVTDYNAKILHFCQLGDLEN-AMELICMCKKSELETK--TYSSVLQLCAGLKSFT 116

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             ++V++        +D+ +G  L+S YA  G +++ R+ F+++ +KN+  +N MV  YA
Sbjct: 117 DGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176

Query: 466 K--------------------NLNSEKAFELLHEIEDT---------------------- 483
           K                        E AFEL  ++ D                       
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236

Query: 484 ---------GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
                    G+     T  S+L G ++ G +  G+ +H+  IKS FE      N L+ MY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S+C +++ A +VF++M +RNV+SWTSMI G+ + G +  A+++  +M  +G+K + +   
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQ--RMEH--YAC--MVDLLGRSGSLTEALEF 648
           ++L AC+ +G +  G        D H  ++   ME   + C  ++D+  + GS+ EA   
Sbjct: 357 SILHACARSGSLDNG-------KDVHDYIKANNMESNLFVCNALMDMYAKCGSM-EAANS 408

Query: 649 IRSMPLSADVLVWRTFLG 666
           + S  +  D++ W T +G
Sbjct: 409 VFSTMVVKDIISWNTMIG 426


>gi|296087599|emb|CBI34855.3| unnamed protein product [Vitis vinifera]
          Length = 956

 Score =  480 bits (1235), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 278/871 (31%), Positives = 460/871 (52%), Gaps = 84/871 (9%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVILNSLISLYSKC 126
           ++   G  PD  T  + LK+C   R   LGK++H    ++ ++  +  + ++L+ LYSKC
Sbjct: 93  MICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKC 152

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----GFCP---- 178
           G + EA K+F+    + D V W+SM++ Y       +A+ +F +M+ +    G  P    
Sbjct: 153 GQMGEALKVFEEF-QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCFDGDLPLVNS 211

Query: 179 --NEYC----------------------FSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
             N Y                       +S +I   +N E       ++  +++  +  +
Sbjct: 212 LLNLYAKTGCEKIAANLFSKMPEKDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPN 271

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            V V  AL    V  S +LE   K+      K+ V W  +++   Q G    ++ +F +M
Sbjct: 272 SVTVVSALQACAV--SRNLEEGKKIHKIAVWKDVVSWVALLSGYAQNGMAYKSMGVFRNM 329

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +  G  PD   +  +++A SEL +F     LH + +R+G   +V VG SL+++Y+KC   
Sbjct: 330 LSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKC--- 386

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-------------- 380
           GS+ D+ K+F  M+  +V+ W+++I  Y    GR  EA+++F  MI              
Sbjct: 387 GSLGDAVKLFKGMIVRDVVIWSSMIAAY-GIHGRGGEALEIFDQMIQVMQGITSCYQISM 445

Query: 381 QGQVAP-----------------------NHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           Q QV P                        HF +               A+   ++    
Sbjct: 446 QPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAY 505

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G   D  +      MY    R++ A   FE +       +N M+  +A +     + EL 
Sbjct: 506 GLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDGRFLSSLELY 565

Query: 478 HEI-------EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
            ++       +++GV  +  +  S+L    ++GA+ KGE  H+ +I++GFE +  +  A+
Sbjct: 566 SKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVATAI 625

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MYS+C +++ A  +F E   ++++ W++MI  +  HG   +A+++F +M+  G++P+ 
Sbjct: 626 MDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRPSH 685

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T+  VLSACSH+GL+ EG  +F+ M +E  I +++ +YACMVDLLGR+G L+EA++ I 
Sbjct: 686 VTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVDLIE 745

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           +MP+  D  +W + LGACR+H + +L +  A+ +   DP     H+LLSN+YA+   W  
Sbjct: 746 NMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIYAAKSRWNE 805

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V  +RK M  R   K  G S +E DN+VHKF VG+ SHP+  ++YA+L++LA  +K  GY
Sbjct: 806 VEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELAAPMKHLGY 865

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +P T+FVLH++EEE K   L  HSE++A+AFGLI+TS    +R+ KNLR+CGDCH AIK 
Sbjct: 866 VPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICGDCHNAIKL 925

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS +  R I++RD +RFH  +DG CSC DYW
Sbjct: 926 ISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 956



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 151/663 (22%), Positives = 289/663 (43%), Gaps = 82/663 (12%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           L ++C   R+      +HS + ++ +  ++     L SLY+KC  L  A K+F    +  
Sbjct: 10  LFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP- 65

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           ++  W+S + SY    +  + + +F  M+   G  P+ +     ++AC+    + +G +I
Sbjct: 66  NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +GF  K     SD+ VG AL++++ K    +  A KVF++    +TV WT M+T   Q  
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCG-QMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184

Query: 263 CPRDAIRLFLDMIL----SGFLP------DRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            P +A+ LF  M++     G LP      + +  +G     + L      K + SW+   
Sbjct: 185 DPEEALALFSQMVMMDCFDGDLPLVNSLLNLYAKTGCEKIAANLFSKMPEKDVISWSTMI 244

Query: 313 GL---------ALDVC----------VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
                      AL++              ++V     C V  ++++ +K+    +  +V+
Sbjct: 245 ACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKDVV 304

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW A+++GY Q+G   K ++ +F +M+   + P+      +L A   L     A  ++ +
Sbjct: 305 SWVALLSGYAQNGMAYK-SMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGY 363

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            V+ G   +  VG SLI +Y++ G + DA K F+ +  +++V +++M+ AY  +    +A
Sbjct: 364 VVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEA 423

Query: 474 FELLHEIEDTGVG-TSAYTFA---------SLLSGASSIGAIGKGEQIHAR--------- 514
            E+  ++     G TS Y  +         ++ S   +     K +  + R         
Sbjct: 424 LEIFDQMIQVMQGITSCYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHF 483

Query: 515 ------------------IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
                             I   G + +  I      MY     ++AA  VF+++ +    
Sbjct: 484 WEIFPTYPFQAADMSKSNIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSF 543

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIK-------PNGITYIAVLSACSHAGLISEG 609
            W  MI GFA  G    +LE++ KM+  G+K       PN ++ ++VL AC + G + +G
Sbjct: 544 LWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKG 603

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
            + F S   + G    +     ++D+  + GSL  A   +       D++ W   + +  
Sbjct: 604 -EWFHSYVIQTGFEFDILVATAIMDMYSKCGSLDLA-RCLFDETAGKDLVCWSAMIASYG 661

Query: 670 VHG 672
           +HG
Sbjct: 662 IHG 664



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 117/451 (25%), Positives = 204/451 (45%), Gaps = 70/451 (15%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   K++     M   G  PD      +L +      F     +H  + RS    N
Sbjct: 313 YAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSN 372

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  SLI LYSKCG L +A K+FK M   RD+V WSSMI++Y   G+  +A+ +F +M+
Sbjct: 373 VFVGASLIELYSKCGSLGDAVKLFKGM-IVRDVVIWSSMIAAYGIHGRGGEALEIFDQMI 431

Query: 173 EL--GFCPNEYCFSA----------VIRACSNTENVA--------------IGHI----- 201
           ++  G      C+             I +C+   ++               +GH      
Sbjct: 432 QVMQGITS---CYQISMQPQVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFP 488

Query: 202 -------------IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
                        I+ + L+   +DS +    A+  M+V  +  +++A  VF+ +    +
Sbjct: 489 TYPFQAADMSKSNIFAYGLQ---YDSRILTKFAI--MYVSFN-RIDAASIVFEDIPNPCS 542

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMIL-------SGFLPDRFTLSGVVSACSELELFTS 301
             W +MI      G    ++ L+  M+        SG +P+R ++  V+ AC  L     
Sbjct: 543 FLWNVMIRGFATDGRFLSSLELYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRK 602

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+  HS+ I+TG   D+ V  +++DMY+KC   GS+D +R +FD     +++ W+A+I  
Sbjct: 603 GEWFHSYVIQTGFEFDILVATAIMDMYSKC---GSLDLARCLFDETAGKDLVCWSAMIAS 659

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRG 418
           Y    G  ++A+ LF  M++  V P+H TF  VL AC   G L +  +  Q+ T      
Sbjct: 660 Y-GIHGHGRKAIDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIA 718

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESL 449
           R L +     ++ +  R+G++ +A    E++
Sbjct: 719 RKLSNYA--CMVDLLGRAGQLSEAVDLIENM 747



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 122/558 (21%), Positives = 231/558 (41%), Gaps = 92/558 (16%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + N+    +A+     M +K   P+  T    L++C  SRN   GK +H +         
Sbjct: 247 YANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVW------ 300

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
                                         +D+VSW +++S Y   G    ++ +F  ML
Sbjct: 301 ------------------------------KDVVSWVALLSGYAQNGMAYKSMGVFRNML 330

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
             G  P+      ++ A S          ++G++++ G F+S+V VG +LI+++ K GS 
Sbjct: 331 SDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSG-FNSNVFVGASLIELYSKCGS- 388

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI--LSGF-------LPD 282
            L  A K+F  M  ++ V W+ MI      G   +A+ +F  MI  + G        +  
Sbjct: 389 -LGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMIQVMQGITSCYQISMQP 447

Query: 283 RFTLSGVVSACS-------ELELFTSGKQL----HSWAI-----------------RTGL 314
           +      +++C+       +++ F          H W I                   GL
Sbjct: 448 QVQPPLAITSCTLATHIPWKVKAFYMRAHFRWLGHFWEIFPTYPFQAADMSKSNIFAYGL 507

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             D  +      MY        +D +  VF+ + +     W  +I G+  + GR   +++
Sbjct: 508 QYDSRILTKFAIMYVSFN---RIDAASIVFEDIPNPCSFLWNVMIRGFA-TDGRFLSSLE 563

Query: 375 LFSDMIQ-------GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
           L+S M++         V PN  +  SVL ACGNL      E  +++ ++ G   D  V  
Sbjct: 564 LYSKMMEKGLKPDNSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFDILVAT 623

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +++ MY++ G ++ AR  F+    K+LV ++ M+ +Y  + +  KA +L  ++   GV  
Sbjct: 624 AIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMVKAGVRP 683

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQ 545
           S  TF  +LS  S  G + +G +++ +++   F     +  Y  ++ +  R   +  A  
Sbjct: 684 SHVTFTCVLSACSHSGLLEEG-KMYFQLMTEEFVIARKLSNYACMVDLLGRAGQLSEAVD 742

Query: 546 VFKEME-DRNVISWTSMI 562
           + + M  + +   W S++
Sbjct: 743 LIENMPVEPDASIWGSLL 760



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 102/221 (46%), Gaps = 10/221 (4%)

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           Q+H+++ K+G   +      L S+Y++CA+++AA +VF E    NV  W S +  + +  
Sbjct: 22  QLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHPNVHLWNSTLRSYCREK 81

Query: 570 FAARALEIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEG--WKHFRSMYDEHGIVQRM 626
                L +F+ M+   G  P+  T    L AC+   ++  G     F    DE G    M
Sbjct: 82  QWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIG--SDM 139

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
              + +V+L  + G + EAL+         D ++W + +   + + D E        ++ 
Sbjct: 140 FVGSALVELYSKCGQMGEALKVFEEFQ-RPDTVLWTSMVTGYQQNNDPEEALALFSQMVM 198

Query: 687 QDPQD---PAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
            D  D   P  + LL NLYA  G  +  AN+  +M E+++I
Sbjct: 199 MDCFDGDLPLVNSLL-NLYAKTGCEKIAANLFSKMPEKDVI 238


>gi|359487569|ref|XP_002277031.2| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Vitis vinifera]
          Length = 703

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 265/750 (35%), Positives = 429/750 (57%), Gaps = 63/750 (8%)

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           ++  NS I+ Y++ G +  A ++F  M +K  IVSW+SM++ Y    +  +A ++F +M 
Sbjct: 16  AIAYNSQIARYARIGQIESARRVFDEMPDK-GIVSWNSMVAGYFQNNRPREARYLFDKMP 74

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           E                  NT  V+   +I G+                     VK  + 
Sbjct: 75  E-----------------RNT--VSWNGLISGY---------------------VKNRM- 93

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A K FD M E+N V WT M+    Q G   +A  LF  M      P++  +S  V  
Sbjct: 94  VSEARKAFDTMPERNVVSWTAMVRGYVQEGLVSEAETLFWQM------PEKNVVSWTVML 147

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
              +++    +    + I      DV    +++  Y +   +G + ++R++FD M   NV
Sbjct: 148 GGLIQVRRIDEARGLFDIMP--VKDVVARTNMISGYCQ---EGRLAEARELFDEMPRRNV 202

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT +I+GYVQ+G  D  A KLF  M +     N  ++ ++L   G      + E    
Sbjct: 203 ISWTTMISGYVQNGQVDV-ARKLFEVMPE----KNEVSWTAML--MGYTQGGRIEEASEL 255

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                 +A+  C  N++I  + ++G +  AR+ F+ + EK+  +++ M+  Y +     +
Sbjct: 256 FDAMPVKAVVAC--NAMILGFGQNGEVAKARQVFDQIREKDDGTWSAMIKVYERKGFEVE 313

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  L   ++  GV ++  +  S+LS  +S+ ++  G Q+HA ++KS F+S+  + + LI+
Sbjct: 314 ALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLIT 373

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY +C ++  A Q+F     ++++ W S+ITG+A+HG    AL++F++M + G+  +G+T
Sbjct: 374 MYVKCGDLVKARQIFDRFSPKDIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDGVT 433

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VLSACS+ G + EG + F SM  ++ +  + EHYACMVDLLGR+G + +A++ I+ M
Sbjct: 434 FVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKM 493

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+ AD ++W   LGACR H +  L + AA+ +L+ +P++   +ILLSN+YAS G W  VA
Sbjct: 494 PVEADAIIWGALLGACRTHMNMNLAEVAAKKLLQLEPKNAGPYILLSNIYASKGRWGDVA 553

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVG-ETSHPKTLEIYAELDQLALKIKEFGYL 771
            +R+ M+ + + K  GCSWIE + +VH F  G  T HP+   I   L++L   ++E GY 
Sbjct: 554 ELRRNMRVKKVSKSPGCSWIEVEKRVHMFTGGVSTKHPELSSIMKMLEKLDGMLREAGYY 613

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PD++FVLH+++EE+KV+ L  HSE++AVAFGL+   +  PIRV KNLRVCGDCH+AIK I
Sbjct: 614 PDSSFVLHDVDEEEKVRSLGHHSERLAVAFGLLKVPEGMPIRVMKNLRVCGDCHSAIKLI 673

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + +TGREI+LRD+NRFHH KDG CSC DYW
Sbjct: 674 AKITGREIILRDANRFHHFKDGFCSCRDYW 703



 Score =  147 bits (370), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 223/474 (47%), Gaps = 51/474 (10%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E N+V  N LIS Y K   ++EA K F +M  +R++VSW++M+  YV  G   +A  +F 
Sbjct: 75  ERNTVSWNGLISGYVKNRMVSEARKAFDTM-PERNVVSWTAMVRGYVQEGLVSEAETLFW 133

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC-------GYFD----SDVCV 218
           +M E                    +NV    ++ G L++        G FD     DV  
Sbjct: 134 QMPE--------------------KNVVSWTVMLGGLIQVRRIDEARGLFDIMPVKDVVA 173

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
              +I  + +    L  A ++FD+M  +N + WT MI+   Q G    A +LF       
Sbjct: 174 RTNMISGYCQEG-RLAEARELFDEMPRRNVISWTTMISGYVQNGQVDVARKLF------E 226

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWA-IRTGLALDVCVGCSLVDMYAKCTVDGSV 337
            +P++      VS  + L  +T G ++   + +   + +   V C+   M      +G V
Sbjct: 227 VMPEK----NEVSWTAMLMGYTQGGRIEEASELFDAMPVKAVVACNA--MILGFGQNGEV 280

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
             +R+VFD++ + +  +W+A+I  Y +  G + EA+ LF+ M +  V  N  +  SVL  
Sbjct: 281 AKARQVFDQIREKDDGTWSAMIKVY-ERKGFEVEALNLFALMQREGVQSNFPSLISVLSV 339

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L   +   QV+   VK     D  V + LI+MY + G +  AR+ F+    K++V +
Sbjct: 340 CASLASLDHGRQVHAELVKSQFDSDVFVASVLITMYVKCGDLVKARQIFDRFSPKDIVMW 399

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N+++  YA++   E+A ++ HE+  +G+ T   TF  +LS  S  G + +G +I    +K
Sbjct: 400 NSIITGYAQHGLVEEALQVFHEMCSSGMATDGVTFVGVLSACSYTGKVKEGLEIFES-MK 458

Query: 518 SGF--ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           S +  E     Y  ++ +  R   V  A  + ++M  + + I W +++     H
Sbjct: 459 SKYLVEPKTEHYACMVDLLGRAGLVNDAMDLIQKMPVEADAIIWGALLGACRTH 512



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 3/199 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+    LM ++G   +  +   +L  C    +   G+ VH+ L +S+ + +  + + LI
Sbjct: 313 EALNLFALMQREGVQSNFPSLISVLSVCASLASLDHGRQVHAELVKSQFDSDVFVASVLI 372

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           ++Y KCGDL +A +IF     K DIV W+S+I+ Y   G   +A+ +F EM   G   + 
Sbjct: 373 TMYVKCGDLVKARQIFDRFSPK-DIVMWNSIITGYAQHGLVEEALQVFHEMCSSGMATDG 431

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             F  V+ ACS T  V  G  I+  +      +        ++D+  +  + +  A  + 
Sbjct: 432 VTFVGVLSACSYTGKVKEGLEIFESMKSKYLVEPKTEHYACMVDLLGRAGL-VNDAMDLI 490

Query: 241 DKM-TEKNTVGWTLMITRC 258
            KM  E + + W  ++  C
Sbjct: 491 QKMPVEADAIIWGALLGAC 509


>gi|224125684|ref|XP_002319650.1| predicted protein [Populus trichocarpa]
 gi|222858026|gb|EEE95573.1| predicted protein [Populus trichocarpa]
          Length = 705

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 238/620 (38%), Positives = 375/620 (60%), Gaps = 26/620 (4%)

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
           PR A+  +  M       D F +  V+ ACS++ +   GK++H ++++ GL  DV V  +
Sbjct: 90  PRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSDVFVVNA 149

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW----------------------TAIITG 361
           L+ MY++C   GS+  +R +FD+M + +V+SW                      TA+I G
Sbjct: 150 LMQMYSEC---GSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAMIAG 206

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y++    + E  +LF  MI+  V PN  T  S++ +CG +    + ++++ + ++ G  +
Sbjct: 207 YIRCNDLE-EGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNGFGM 265

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              +  +L+ MY + G +  AR  F+S+  K+++++  M+ AYA+    + AF+L  ++ 
Sbjct: 266 SLALATALVDMYGKCGEIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLFVQMR 325

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           D GV  +  T  SLLS  +  GA+  G+  HA I K G E +  +  ALI MY++C ++ 
Sbjct: 326 DNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKCGDIS 385

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A ++F E  DR++ +W  M+ G+  HG+  +AL++F +M   G+KPN IT+I  L ACS
Sbjct: 386 GAQRLFSEAIDRDICTWNVMMAGYGMHGYGEKALKLFTEMETLGVKPNDITFIGALHACS 445

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGL+ EG   F  M  + G+V ++EHY CMVDLLGR+G L EA + I SMP++ ++ +W
Sbjct: 446 HAGLVVEGKGLFEKMIHDFGLVPKVEHYGCMVDLLGRAGLLDEAYKMIESMPVTPNIAIW 505

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              L AC++H ++ +G+ AA  +L  +PQ+    +L+SN+YA+A  W  VA +RK +K+ 
Sbjct: 506 GAMLAACKIHKNSNMGELAARELLALEPQNCGYKVLMSNIYAAANRWNDVAGMRKAVKDT 565

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + KE G S IE +  VH F +G+T+HP   +I   L +++ K+KE GYLPDT+ VLH +
Sbjct: 566 GIKKEPGMSSIEVNGLVHDFKMGDTAHPLIEKISEMLAEMSKKLKEAGYLPDTSVVLHNI 625

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           +EE+K   L  HSEK+A+AFGLIST+   PIRV KNLR+C DCHT  K +S +  R I++
Sbjct: 626 DEEEKETALNYHSEKLAMAFGLISTAPGTPIRVVKNLRICDDCHTVTKLLSKIYKRVIIV 685

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD NRFHH ++G CSC  YW
Sbjct: 686 RDRNRFHHFREGSCSCGGYW 705



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 132/503 (26%), Positives = 231/503 (45%), Gaps = 53/503 (10%)

Query: 12  IPPPSSFK--PSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLM 69
           IPPPS+F   P NPS Q+       P    P     L      H +  R           
Sbjct: 25  IPPPSTFTKTPQNPSPQHQNKHQKHPSFT-PNNHLCLDQTQQLHAHITRTHFNHAQQVSF 83

Query: 70  TQKGNHPD--LDTYSLL---------------LKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   +HP   L+TY+ +               LK+C +     +GK +H    ++ L  +
Sbjct: 84  SPFESHPRYALNTYTYMRKLDIEVDSFIIPSVLKACSQISVARMGKEIHGFSVKNGLVSD 143

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK---------------------RDIVSWSSM 151
             ++N+L+ +YS+CG L  A  +F  M  +                     R IVSW++M
Sbjct: 144 VFVVNALMQMYSECGSLVSARLLFDKMSERDVVSWSTMIRAYITLFYGFSQRSIVSWTAM 203

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           I+ Y+      +   +FV M+E    PN+    ++I +C     V +G  ++ ++L+ G 
Sbjct: 204 IAGYIRCNDLEEGERLFVRMIEENVFPNDITMLSLIISCGFVGAVQLGKRLHAYILRNG- 262

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F   + +  AL+DM+ K   ++ SA  +FD M  K+ + WT MI+   Q  C   A +LF
Sbjct: 263 FGMSLALATALVDMYGKCG-EIRSARAIFDSMKNKDVMTWTAMISAYAQANCIDYAFQLF 321

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           + M  +G  P+  T+  ++S C+       GK  H++  + G+ +DV +  +L+DMYAKC
Sbjct: 322 VQMRDNGVRPNELTMVSLLSLCAVNGALDMGKWFHAYIDKQGVEVDVILKTALIDMYAKC 381

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +  ++++F   +D ++ +W  ++ GY   G  +K A+KLF++M    V PN  TF
Sbjct: 382 ---GDISGAQRLFSEAIDRDICTWNVMMAGYGMHGYGEK-ALKLFTEMETLGVKPNDITF 437

Query: 392 ASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
              L AC   G +++     +   H       ++      ++ +  R+G +++A K  ES
Sbjct: 438 IGALHACSHAGLVVEGKGLFEKMIHDFGLVPKVEHY--GCMVDLLGRAGLLDEAYKMIES 495

Query: 449 L-FEKNLVSYNTMVDAYAKNLNS 470
           +    N+  +  M+ A   + NS
Sbjct: 496 MPVTPNIAIWGAMLAACKIHKNS 518


>gi|357438977|ref|XP_003589765.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478813|gb|AES60016.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 960

 Score =  479 bits (1234), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/815 (33%), Positives = 435/815 (53%), Gaps = 79/815 (9%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           N    N++I        +++A K+F  M  + +D VSW++MIS Y   G    +   F  
Sbjct: 73  NIFTWNTMIRALVSSSRMSDAEKLFDEMPVRVKDSVSWTTMISGYSQNGFHSRSFETFSL 132

Query: 171 ML----ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           M+    + G   + + F++V++AC +  +  +   ++  + K G F  + C+  +++ M+
Sbjct: 133 MIRDTNDGGKNYDPFSFTSVMKACGSLGDSRLAIQLHALVSKLG-FGMETCIQNSVVGMY 191

Query: 227 VK-GSVDLES-----------------------------AYKVFDKMTEKNTVGWTLMIT 256
           VK G VDL                               A ++F++M E++ V W  +I+
Sbjct: 192 VKCGDVDLAETVFFDIERPSLFCWNSMIYGYSQMYGPYKALQIFNRMPERDEVSWNTLIS 251

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
             +Q G     + +F++M   GF P+  T   V+SAC+       G  LH+  +R   +L
Sbjct: 252 IFSQHGFGVQCLAMFVEMCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSL 311

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           D+  G  L+DMYAKC   G +D +++VF  + +H+ +SW ++ITG V   G  ++A+ LF
Sbjct: 312 DLVFGNGLIDMYAKC---GCLDLAKRVFKSLREHDHISWNSLITGVVHF-GLGEDALILF 367

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA-- 434
           + M +  V  + F   ++L  C     ++  E ++ + +K G      VGN++I+MYA  
Sbjct: 368 NQMRRSSVVLDEFILPTILGVCSGPDYASTGELLHGYTIKSGMGSSAPVGNAIITMYAKC 427

Query: 435 -----------------------------RSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
                                        RSG +  AR  F+ + E+N+V++N+M+  Y 
Sbjct: 428 GDTDKADLVFRLMPLRNTISWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYV 487

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +N  SE+  +L   +   GV     TF + +   + +  +  G Q+     K G   N  
Sbjct: 488 QNGFSEEGLKLYVSMRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVS 547

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + N++++MYSRC  ++ A   F  ++D+++ISW +M+  FA++G   + ++ F  ML   
Sbjct: 548 VANSIVTMYSRCGLIKEAKNTFDSIDDKDLISWNAMLAAFAQNGLGIKVIDTFEDMLKTE 607

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
            KPN I+Y++VLS CSH GL++EG  +F SM    GI    EH++CMVDLLGR+G L +A
Sbjct: 608 CKPNHISYVSVLSGCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQA 667

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
            + I  MP   +  VW   LG+CRVH D  L + AA+ ++E D +    ++LLSN+Y+ +
Sbjct: 668 KDLIEGMPFKPNATVWSALLGSCRVHHDLRLAETAAKKLMELDVEGSEGYVLLSNMYSES 727

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G  + VA++RK MK + +    GCSWIE DN+VH F V ETSHP+  E+Y +L+++   I
Sbjct: 728 GELDNVADMRKLMKVKGIRTSRGCSWIEVDNRVHVFTVDETSHPQIKEVYLKLEEMMKMI 787

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           ++ G      ++  E    +  +Y   HSEK+A AFGL++     PI V KNLRVC DCH
Sbjct: 788 EDTG-----KYITVESSVHRSKKY---HSEKLAFAFGLLNLPSWMPIHVMKNLRVCDDCH 839

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
             IK +S+VT RE+++RD  RFHH KDG CSC DY
Sbjct: 840 LVIKLLSLVTSRELIMRDGYRFHHFKDGICSCKDY 874



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 216/427 (50%), Gaps = 42/427 (9%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P+  TY  +L +C  + +   G  +H+ + R +   + V  N LI +Y+KCG 
Sbjct: 269 MCNQGFSPNFMTYGSVLSACASTSDLKWGAHLHARILRMEHSLDLVFGNGLIDMYAKCGC 328

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+ A ++FKS+  + D +SW+S+I+  V+ G   DA+ +F +M       +E+    ++ 
Sbjct: 329 LDLAKRVFKSL-REHDHISWNSLITGVVHFGLGEDALILFNQMRRSSVVLDEFILPTILG 387

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-------------------- 228
            CS  +  + G +++G+ +K G   S   VG A+I M+ K                    
Sbjct: 388 VCSGPDYASTGELLHGYTIKSG-MGSSAPVGNAIITMYAKCGDTDKADLVFRLMPLRNTI 446

Query: 229 ----------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
                      S D+  A   FD M E+N V W  M++   Q G   + ++L++ M  +G
Sbjct: 447 SWTAMITAFSRSGDIGKARGYFDMMPERNIVTWNSMLSTYVQNGFSEEGLKLYVSMRSNG 506

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD  T +  + AC++L +   G Q+ + A + GL+L+V V  S+V MY++C   G + 
Sbjct: 507 VQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRC---GLIK 563

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           +++  FD + D +++SW A++  + Q+G   K  +  F DM++ +  PNH ++ SVL  C
Sbjct: 564 EAKNTFDSIDDKDLISWNAMLAAFAQNGLGIK-VIDTFEDMLKTECKPNHISYVSVLSGC 622

Query: 399 GNLLDSNVAE-QVYTHAVKR--GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNL 454
            ++    VAE + Y  ++ R  G +  +   + ++ +  R+G +E A+   E + F+ N 
Sbjct: 623 SHM--GLVAEGKHYFDSMTRVFGISPTNEHFSCMVDLLGRAGLLEQAKDLIEGMPFKPNA 680

Query: 455 VSYNTMV 461
             ++ ++
Sbjct: 681 TVWSALL 687



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 51/192 (26%), Positives = 97/192 (50%), Gaps = 5/192 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD  T++  +++C       LG  V +  T+  L  N  + NS++++YS+CG 
Sbjct: 502 MRSNGVQPDWITFTTSIRACADLAIVKLGMQVVTHATKFGLSLNVSVANSIVTMYSRCGL 561

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + EA   F S+ +K D++SW++M++++   G  +  I  F +ML+    PN   + +V+ 
Sbjct: 562 IKEAKNTFDSIDDK-DLISWNAMLAAFAQNGLGIKVIDTFEDMLKTECKPNHISYVSVLS 620

Query: 189 ACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK- 246
            CS+   VA G   +  + +  G   ++    C ++D+  +  + LE A  + + M  K 
Sbjct: 621 GCSHMGLVAEGKHYFDSMTRVFGISPTNEHFSC-MVDLLGRAGL-LEQAKDLIEGMPFKP 678

Query: 247 NTVGWTLMITRC 258
           N   W+ ++  C
Sbjct: 679 NATVWSALLGSC 690


>gi|449470104|ref|XP_004152758.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
 gi|449504088|ref|XP_004162249.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 262/705 (37%), Positives = 392/705 (55%), Gaps = 76/705 (10%)

Query: 232 DLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +L+ A ++F++  +  ++TV +  MIT  + +     AI LF  M  + F PD FT + V
Sbjct: 94  NLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELFRAMRWANFQPDDFTFASV 153

Query: 290 VSACSELELFTSGK--QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS------VDDSR 341
           +SA S L  +   +  Q+H   ++ G+ +   V  +L+ +Y KC           +  +R
Sbjct: 154 LSA-STLIFYDERQCGQMHGTVVKFGIEIFPAVLNALLSVYVKCASSPLVSSSSLMASAR 212

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSG------------------------------GRDKE 371
           K+FD M   N   WT +ITGYV++G                              G  ++
Sbjct: 213 KLFDEMPKRNEFIWTTLITGYVRNGDLTGAREILDTMTEQPGIAWNAMISGYLHHGLFED 272

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGN----LLDSNVAEQVYTHAVKRGRALDDCVGN 427
           A+ LF  M    V  +  T+ SV+ AC +    LL   V   +  + +   R     VGN
Sbjct: 273 ALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGN 332

Query: 428 SLISMYAR-------------------------------SGRMEDARKAFESLFEKNLVS 456
           +LI++Y +                               +GRME+A+  F  + EKNL++
Sbjct: 333 TLITLYWKYGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLT 392

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +  M+   A+N   E+A +L ++++  G   + Y FA  ++  S +GA+  G Q+HA+I+
Sbjct: 393 WTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIV 452

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
             G +S   + NA+I+MY+RC  VEAA  +F  M   + +SW SMI    +HG   +A+E
Sbjct: 453 HLGHDSTLSVGNAMITMYARCGIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVKAIE 512

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           ++ +ML +GI P+  T++ VLSACSHAGL+ EG ++F SM + +GI    +HYA M+DL 
Sbjct: 513 LYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLF 572

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
            R+G  ++A   I SMP  A   +W   L  CR HG+ +LG  AAE + +  PQ    ++
Sbjct: 573 CRAGKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYV 632

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YAS G W  VA  RK M++R + KE  CSW E +NKVH F V +T HP+ L IY 
Sbjct: 633 LLSNMYASLGRWNDVARTRKLMRDRGVKKEPACSWTEVENKVHVFLVDDTVHPEVLSIYN 692

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            L++L L++K+ GY+PDT +VLH++E E K   L  HSEK+AVAFGL+   +   +RVFK
Sbjct: 693 YLEKLNLEMKKIGYIPDTKYVLHDMESEHKEYALSTHSEKLAVAFGLMKLPQGATVRVFK 752

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLR+CGDCH AIK++S V GREIV+RD  RFHH K+G+CSC +YW
Sbjct: 753 NLRICGDCHNAIKFMSKVVGREIVVRDGKRFHHFKNGECSCRNYW 797



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 148/562 (26%), Positives = 248/562 (44%), Gaps = 102/562 (18%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           +P+ +   +LI+ YS  G+L  A +IF     + RD V +++MI+ Y +      AI +F
Sbjct: 76  QPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITGYSHMNDGHSAIELF 135

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV---------CVG 219
             M    F P+++ F++V+ A +         +I+    +CG     V          V 
Sbjct: 136 RAMRWANFQPDDFTFASVLSAST---------LIFYDERQCGQMHGTVVKFGIEIFPAVL 186

Query: 220 CALIDMFVKGSVD--------LESAYKVFDKMTEKNTVGWTLMIT---RCTQL------- 261
            AL+ ++VK +          + SA K+FD+M ++N   WT +IT   R   L       
Sbjct: 187 NALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTGAREIL 246

Query: 262 ---------------------GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
                                G   DA+ LF  M L G   D  T + V+SAC++   F 
Sbjct: 247 DTMTEQPGIAWNAMISGYLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFL 306

Query: 301 SGKQLHSWAIRTGLALD----VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            GKQ+H++ ++  L  D    + VG +L+ +Y K    G VD +RK+F  M   ++++W 
Sbjct: 307 LGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKY---GKVDGARKIFYEMPVKDIITWN 363

Query: 357 AIITGYVQSG------------------------------GRDKEAVKLFSDMIQGQVAP 386
            +++GYV +G                              G  ++A+KLF+ M      P
Sbjct: 364 TLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEP 423

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N + FA  + AC  L       Q++   V  G      VGN++I+MYAR G +E AR  F
Sbjct: 424 NDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTLSVGNAMITMYARCGIVEAARTMF 483

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
            ++   + VS+N+M+ A  ++ +  KA EL  ++   G+     TF ++LS  S  G + 
Sbjct: 484 LTMPFVDPVSWNSMIAALGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVE 543

Query: 507 KGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM--EDRNVISWTSMIT 563
           +G +    ++++ G       Y  +I ++ R      A  V   M  E R  I W +++ 
Sbjct: 544 EGNRYFNSMLENYGIAPGEDHYARMIDLFCRAGKFSDAKNVIDSMPFEARAPI-WEALLA 602

Query: 564 GFAKHG---FAARALEIFYKML 582
           G   HG       A E  +K++
Sbjct: 603 GCRTHGNMDLGIEAAEKLFKLI 624



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 204/416 (49%), Gaps = 47/416 (11%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N  I  +LI+ Y + GDL  A +I  +M  +  I +W++MIS Y++ G   DA+ +F +M
Sbjct: 222 NEFIWTTLITGYVRNGDLTGAREILDTMTEQPGI-AWNAMISGYLHHGLFEDALTLFRKM 280

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-DSD--VCVGCALIDMFVK 228
             LG   +E  +++VI AC++     +G  ++ ++LK     D D  + VG  LI ++ K
Sbjct: 281 RLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWK 340

Query: 229 -GSVD-----------------------------LESAYKVFDKMTEKNTVGWTLMITRC 258
            G VD                             +E A   F +M EKN + WT+MI+  
Sbjct: 341 YGKVDGARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLLTWTVMISGL 400

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q G    A++LF  M L G+ P+ +  +G ++ACS L    +G+QLH+  +  G    +
Sbjct: 401 AQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALENGRQLHAQIVHLGHDSTL 460

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG +++ MYA+C   G V+ +R +F  M   + +SW ++I    Q G   K A++L+  
Sbjct: 461 SVGNAMITMYARC---GIVEAARTMFLTMPFVDPVSWNSMIAALGQHGHGVK-AIELYEQ 516

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR-GRALDDCVGNSLISMYARSG 437
           M++  + P+  TF +VL AC +        + +   ++  G A  +     +I ++ R+G
Sbjct: 517 MLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAPGEDHYARMIDLFCRAG 576

Query: 438 RMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN-------SEKAFELLHEIEDTGV 485
           +  DA+   +S+ FE     +  ++     + N       +EK F+L+ + + T V
Sbjct: 577 KFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAAEKLFKLIPQHDGTYV 632



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/369 (28%), Positives = 170/369 (46%), Gaps = 46/369 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L+ G  + A+     M   G   D  TY+ ++ +C     F LGK VH+ + +++L P+
Sbjct: 264 YLHHGLFEDALTLFRKMRLLGVQVDESTYTSVISACADGGFFLLGKQVHAYILKNELNPD 323

Query: 113 SVIL----NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
              L    N+LI+LY K G ++ A KIF  M  K DI++W++++S YVN G+  +A   F
Sbjct: 324 RDFLLSVGNTLITLYWKYGKVDGARKIFYEMPVK-DIITWNTLLSGYVNAGRMEEAKSFF 382

Query: 169 VEMLEL-------------------------------GFCPNEYCFSAVIRACSNTENVA 197
            +M E                                G+ PN+Y F+  I ACS    + 
Sbjct: 383 AQMPEKNLLTWTVMISGLAQNGFGEQALKLFNQMKLDGYEPNDYAFAGAITACSVLGALE 442

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  ++  ++  G+ DS + VG A+I M+ +  + +E+A  +F  M   + V W  MI  
Sbjct: 443 NGRQLHAQIVHLGH-DSTLSVGNAMITMYARCGI-VEAARTMFLTMPFVDPVSWNSMIAA 500

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLAL 316
             Q G    AI L+  M+  G LPDR T   V+SACS   L   G +  +S     G+A 
Sbjct: 501 LGQHGHGVKAIELYEQMLKEGILPDRRTFLTVLSACSHAGLVEEGNRYFNSMLENYGIAP 560

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRD---KEA 372
                  ++D++ +    G   D++ V D M  +     W A++ G    G  D   + A
Sbjct: 561 GEDHYARMIDLFCRA---GKFSDAKNVIDSMPFEARAPIWEALLAGCRTHGNMDLGIEAA 617

Query: 373 VKLFSDMIQ 381
            KLF  + Q
Sbjct: 618 EKLFKLIPQ 626



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 102/406 (25%), Positives = 175/406 (43%), Gaps = 76/406 (18%)

Query: 378 DMIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
           +++  +V  N + FA +   C  NL   ++A  V+ H +  G  L   + N LI +Y +S
Sbjct: 3   NVLDVRVLANRY-FAQLNLCCPQNLSSYSLARTVHGHVIASGFKLRGHIVNRLIDIYWKS 61

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE----IEDT--------- 483
                ARK F+ + + ++++  T++ AY+   N + A E+ +E    + DT         
Sbjct: 62  SDFVYARKLFDEIPQPDVIARTTLITAYSALGNLKMAREIFNETPLDMRDTVFYNAMITG 121

Query: 484 ----GVGTSA----------------YTFASLLSGASSIGAIGKG-EQIHARIIKSGFES 522
                 G SA                +TFAS+LS ++ I    +   Q+H  ++K G E 
Sbjct: 122 YSHMNDGHSAIELFRAMRWANFQPDDFTFASVLSASTLIFYDERQCGQMHGTVVKFGIEI 181

Query: 523 NHCIYNALISMYSRCAN---------VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
              + NAL+S+Y +CA+         + +A ++F EM  RN   WT++ITG+ ++G    
Sbjct: 182 FPAVLNALLSVYVKCASSPLVSSSSLMASARKLFDEMPKRNEFIWTTLITGYVRNGDLTG 241

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           A EI   M     +  GI + A++S   H GL  +    FR M    G+      Y  ++
Sbjct: 242 AREILDTM----TEQPGIAWNAMISGYLHHGLFEDALTLFRKM-RLLGVQVDESTYTSVI 296

Query: 634 D--------LLGRS-------GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
                    LLG+          L    +F+ S+  +   L W+      +V G      
Sbjct: 297 SACADGGFFLLGKQVHAYILKNELNPDRDFLLSVGNTLITLYWKY----GKVDG------ 346

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
            A ++  E   +D      L + Y +AG  E   +   +M E+NL+
Sbjct: 347 -ARKIFYEMPVKDIITWNTLLSGYVNAGRMEEAKSFFAQMPEKNLL 391


>gi|357121739|ref|XP_003562575.1| PREDICTED: pentatricopeptide repeat-containing protein At3g49170,
           chloroplastic-like [Brachypodium distachyon]
          Length = 770

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 249/703 (35%), Positives = 409/703 (58%), Gaps = 18/703 (2%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML+ G       +  ++  C  T ++     ++G ++K G    D+ V  +L++++++  
Sbjct: 69  MLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTGTI-VDIFVATSLVNVYMRCG 127

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
            + + A  +FD+M EKN V WT +IT  T    P  A+ +F++M+  G  P  +TL G++
Sbjct: 128 -NSQDARNLFDEMPEKNVVTWTALITGYTLNSQPVLALEVFVEMLKLGRYPSDYTLGGML 186

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SAC        GKQ+H + I+ G A    +G SL  +Y K    G+++   + F R+ D 
Sbjct: 187 SACVASHNIDLGKQVHGYTIKYGAASITSIGNSLCRLYTK---SGNLESGIRAFKRIPDK 243

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           NV++WT +I+   +     +  + LF DM++G+V PN FT  SV+  CG  LD N+ +QV
Sbjct: 244 NVITWTTMISACAEDENYTELGLNLFLDMLKGEVMPNEFTLTSVMSLCGTSLDMNLGKQV 303

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
                K G A +  V NS + +Y R G  E+A + FE + + +++++N M+  +A+ ++S
Sbjct: 304 QGFCFKIGCATNLPVKNSTMYLYLRKGETEEAMRLFEEMEDNSVITWNAMISGFAQIMDS 363

Query: 471 EK-----------AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            K           A ++  ++  + +    +TF+S+LS  S++ A+ +GEQIHA+ IK+G
Sbjct: 364 AKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFSSILSVCSTMMALEQGEQIHAQTIKTG 423

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F S+  + +AL++MY++C  +E A + F EM  R +++WTSMI+G+++HG    A+++F 
Sbjct: 424 FLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTRTLVTWTSMISGYSQHGRPHDAIQLFE 483

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            M+  G KPN IT++++LSACS+AGL+ E  ++F  M +E+ I   M+HY CM+D+  R 
Sbjct: 484 DMILAGAKPNEITFVSLLSACSYAGLVEEAMRYFDMMQNEYHIEPLMDHYGCMIDMFVRL 543

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L +A  FI+      +  +W + +  CR HG+ EL  +AA+ +LE  P+    ++LL 
Sbjct: 544 GRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVVETYVLLL 603

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y S G W  VA +RK  K  +L      SWI   +KV+ F   + SHP++ E+Y  L+
Sbjct: 604 NMYISTGRWRDVARVRKLSKHEDLGILRDRSWITIRDKVYFFKADDRSHPQSTELYQLLE 663

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQK--VQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            L  K K  GY P  N  L++ EE+ K     L  HSE++AVA GL+       +R+ KN
Sbjct: 664 TLLEKAKAIGYEPYQNTELYDSEEDGKPAAGSLKHHSERLAVALGLLKAPPGVTVRITKN 723

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           + +C DCH++IK+ S++  REIV+RDS R H  KDG+CSC D+
Sbjct: 724 ITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  245 bits (625), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 155/570 (27%), Positives = 297/570 (52%), Gaps = 39/570 (6%)

Query: 54  LNDGRVQKAIFTLDL-----MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           L +GR++     LD      M ++G       Y  LL  CI + +    K +H  + ++ 
Sbjct: 49  LENGRLEAPPRPLDAQEAMAMLKEGQSVQSAMYVPLLHRCIETGSLGGAKALHGHMVKTG 108

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
              +  +  SL+++Y +CG+  +A  +F  M  K ++V+W+++I+ Y    + V A+ +F
Sbjct: 109 TIVDIFVATSLVNVYMRCGNSQDARNLFDEMPEK-NVVTWTALITGYTLNSQPVLALEVF 167

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           VEML+LG  P++Y    ++ AC  + N+ +G  ++G+ +K G   S   +G +L  ++ K
Sbjct: 168 VEMLKLGRYPSDYTLGGMLSACVASHNIDLGKQVHGYTIKYGA-ASITSIGNSLCRLYTK 226

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRC------TQLGCPRDAIRLFLDMILSGFLPD 282
            S +LES  + F ++ +KN + WT MI+ C      T+LG     + LFLDM+    +P+
Sbjct: 227 -SGNLESGIRAFKRIPDKNVITWTTMISACAEDENYTELG-----LNLFLDMLKGEVMPN 280

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            FTL+ V+S C        GKQ+  +  + G A ++ V  S + +Y +    G  +++ +
Sbjct: 281 EFTLTSVMSLCGTSLDMNLGKQVQGFCFKIGCATNLPVKNSTMYLYLR---KGETEEAMR 337

Query: 343 VFDRMLDHNVMSWTAIITGYVQ----------SGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
           +F+ M D++V++W A+I+G+ Q          +  R  +A+K+F D+++  + P+ FTF+
Sbjct: 338 LFEEMEDNSVITWNAMISGFAQIMDSAKDDLHARSRGFQALKIFRDLVRSAMKPDLFTFS 397

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           S+L  C  ++     EQ++   +K G   D  V ++L++MY + G +E A KAF  +  +
Sbjct: 398 SILSVCSTMMALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEYATKAFVEMPTR 457

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
            LV++ +M+  Y+++     A +L  ++   G   +  TF SLLS  S  G + +  + +
Sbjct: 458 TLVTWTSMISGYSQHGRPHDAIQLFEDMILAGAKPNEITFVSLLSACSYAGLVEEAMR-Y 516

Query: 513 ARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
             ++++ +     +  Y  +I M+ R   ++ A+   K    + N   W+S++ G   HG
Sbjct: 517 FDMMQNEYHIEPLMDHYGCMIDMFVRLGRLDDAYAFIKRKGFEPNEAIWSSLVAGCRSHG 576

Query: 570 FAARALEIFYKMLADGIKPNGI-TYIAVLS 598
               A     ++L   +KP  + TY+ +L+
Sbjct: 577 NMELAFYAADRLLE--LKPKVVETYVLLLN 604


>gi|188509980|gb|ACD56662.1| putative pentatricopeptide [Gossypium arboreum]
          Length = 805

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 263/814 (32%), Positives = 439/814 (53%), Gaps = 81/814 (9%)

Query: 49  RLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           ++++    G ++ A+  L  M QK +  +  TY  +L+ C   ++F  GK VHS++  + 
Sbjct: 72  KILHFCQLGDLENAM-ELICMCQK-SELETKTYGSVLQLCAGLKSFTDGKKVHSIIKSNS 129

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           +  +  +   L+S Y+ CGDL E  ++F +M  K+++  W+ M+S Y             
Sbjct: 130 VGVDGALGLKLVSFYATCGDLKEGRRVFDTM-EKKNVYLWNFMVSEYA------------ 176

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
                                                  K G F   +C+   +++  ++
Sbjct: 177 ---------------------------------------KIGDFKESICLFKIMVEKGIE 197

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G    ESA+++FDK+ +++ + W  MI+     G     + ++  M+  G   D  T+  
Sbjct: 198 GKRP-ESAFELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIIS 256

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+  C+     + GK +HS AI++     +    +L+DMY+KC   G +D + +VF++M 
Sbjct: 257 VLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC---GDLDGALRVFEKMG 313

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV+SWT++I GY + G R   A+KL   M +  V  +     S+L AC      +  +
Sbjct: 314 ERNVVSWTSMIAGYTRDG-RSDGAIKLLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+ +        +  V N+L+ MYA+ G ME A   F ++  K+++S+NTM+     + 
Sbjct: 373 DVHDYIKANNMESNLFVCNALMDMYAKCGSMEAANSVFSTMVVKDIISWNTMIGELKPD- 431

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
                               + T A +L   +S+ A+ +G++IH  I+++G+ S+  + N
Sbjct: 432 --------------------SRTMACVLPACASLSALERGKEIHGYILRNGYSSDRHVAN 471

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ +Y +C  +  A  +F  +  ++++SWT MI G+  HG+   A+  F +M   GI+P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 531

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + +++I++L ACSH+GL+ +GW+ F  M ++  I  ++EHYACMVDLL R+G+L++A EF
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYEF 591

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           + ++P++ D  +W   L  CR + D EL +  AE + E +P++   ++LL+N+YA A  W
Sbjct: 592 METLPIAPDATIWGALLCGCRNYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKW 651

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG-ETSHPKTLEIYAELDQLALKIKE 767
           E V  +R+++ ++ L K  GCSWIE   KV+ F  G  +SHP +  I + L ++  K+KE
Sbjct: 652 EEVKRLREKIGKQGLRKNPGCSWIEIKGKVNLFVSGNNSSHPHSKNIESLLKKMRRKMKE 711

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            G+ P T + L   +E QK   L  HSEK+A+AFGL++    K IRV KNLRVCGDCH  
Sbjct: 712 EGHFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEM 771

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K++S  T REIVLRDSNRFHH KDG CSC  +W
Sbjct: 772 AKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/378 (25%), Positives = 175/378 (46%), Gaps = 68/378 (17%)

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           R +DH V  + A I  + Q G  +  A++L     + ++     T+ SVL+ C  L    
Sbjct: 60  RTIDHQVTDYNAKILHFCQLGDLEN-AMELICMCQKSELETK--TYGSVLQLCAGLKSFT 116

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             ++V++        +D  +G  L+S YA  G +++ R+ F+++ +KN+  +N MV  YA
Sbjct: 117 DGKKVHSIIKSNSVGVDGALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176

Query: 466 K--------------------NLNSEKAFELLHEIEDT---------------------- 483
           K                        E AFEL  ++ D                       
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESAFELFDKLCDRDVISWNSMISGYVSNGLTERGL 236

Query: 484 ---------GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
                    G+     T  S+L G ++ G +  G+ +H+  IKS FE      N L+ MY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S+C +++ A +VF++M +RNV+SWTSMI G+ + G +  A+++  +M  +G+K + +   
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGRSDGAIKLLQQMEKEGVKLDVVAIT 356

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQ--RMEH--YAC--MVDLLGRSGSLTEALEF 648
           ++L AC+ +G +  G        D H  ++   ME   + C  ++D+  + GS+ EA   
Sbjct: 357 SILHACARSGSLDNG-------KDVHDYIKANNMESNLFVCNALMDMYAKCGSM-EAANS 408

Query: 649 IRSMPLSADVLVWRTFLG 666
           + S  +  D++ W T +G
Sbjct: 409 VFSTMVVKDIISWNTMIG 426


>gi|224106277|ref|XP_002314110.1| predicted protein [Populus trichocarpa]
 gi|222850518|gb|EEE88065.1| predicted protein [Populus trichocarpa]
          Length = 738

 Score =  479 bits (1233), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 257/715 (35%), Positives = 396/715 (55%), Gaps = 51/715 (7%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCG-YFD----SDVCVGCALIDMFVKGSVDLESAYKVF 240
           +I  C+N +++   H     +L+ G +FD    + +   CAL          L+ A KVF
Sbjct: 36  LIDKCANKKHLKQLH---AHMLRTGLFFDPPSATKLFTACAL-----SSPSSLDYACKVF 87

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELF 299
           D++   N   W  +I        P   + +F+ M+  S   P+ +T   V+ A +E+   
Sbjct: 88  DQIPRPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSL 147

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
            +G+ +H   ++     D+ +  SL+  Y+     G +D +  VF ++++ +++SW ++I
Sbjct: 148 LAGQAIHGMVMKASFGSDLFISNSLIHFYSSL---GDLDSAYLVFSKIVEKDIVSWNSMI 204

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +G+VQ GG  +EA++LF  M      PN  T   VL AC   +D         +  + G 
Sbjct: 205 SGFVQ-GGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGI 263

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK------------- 466
            ++  + N+++ MY + G +EDAR+ F+ + EK++VS+ TM+D YAK             
Sbjct: 264 DINLILSNAMLDMYVKCGSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDV 323

Query: 467 ------------------NLNSEKAFELLHEIE-DTGVGTSAYTFASLLSGASSIGAIGK 507
                             N   ++A  +  E++ +     +  T AS L+  + +GA+  
Sbjct: 324 MPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDL 383

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G  IH  I K G + N  I  +LI MYS+C ++E A +VF  +E R+V  W++MI G A 
Sbjct: 384 GGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGLAM 443

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG    A+++F KM    +KPN +T+  +L ACSH+GL+ EG   F  M   +G+V   +
Sbjct: 444 HGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPGSK 503

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HYACMVD+LGR+G L EA+E I  MP+     VW   LGACR++G+ EL + A   +LE 
Sbjct: 504 HYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMACSRLLET 563

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           D  +  A++LLSN+YA AG W+ V+ +R+ MK   L KE GCS IE +  +H+F VG+ S
Sbjct: 564 DSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEFLVGDNS 623

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE-QKVQYLFQHSEKIAVAFGLIST 806
           HP + EIY++LD++  +IK  GY+ D + +L  +EEE  K   L  HSEK+A+A+GLI  
Sbjct: 624 HPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEYMKEHALNLHSEKLAIAYGLIRM 683

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             S+PIR+ KNLRVCGDCH+  K IS +  R+I+LRD  RFHH   G CSC DYW
Sbjct: 684 EPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCMDYW 738



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 139/507 (27%), Positives = 259/507 (51%), Gaps = 46/507 (9%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKL---EPNSVILNSLISLYSKCGDLNEANKIF 136
           T  +L+  C   +  HL +L H+ + R+ L    P++  L +  +L S    L+ A K+F
Sbjct: 32  TVPILIDKCANKK--HLKQL-HAHMLRTGLFFDPPSATKLFTACALSSP-SSLDYACKVF 87

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTEN 195
             +  + ++ +W+++I ++ +  K +  + +F++ML E    PN Y F  VI+A +   +
Sbjct: 88  DQIP-RPNLYTWNTLIRAFASSPKPIQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSS 146

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+G ++K   F SD+ +  +LI  F     DL+SAY VF K+ EK+ V W  MI
Sbjct: 147 LLAGQAIHGMVMKAS-FGSDLFISNSLIH-FYSSLGDLDSAYLVFSKIVEKDIVSWNSMI 204

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +   Q G P +A++LF  M +    P+R T+ GV+SAC++      G+    +  R G+ 
Sbjct: 205 SGFVQGGSPEEALQLFKRMKMENARPNRVTMVGVLSACAKRIDLEFGRWACDYIERNGID 264

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--------- 366
           +++ +  +++DMY KC   GS++D+R++FD+M + +++SWT +I GY + G         
Sbjct: 265 INLILSNAMLDMYVKC---GSLEDARRLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVF 321

Query: 367 ---------------------GRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDS 404
                                G+ KEA+ +F ++ +     PN  T AS L AC  L   
Sbjct: 322 DVMPREDITAWNALISSYQQNGKPKEALAIFRELQLNKNTKPNEVTLASTLAACAQLGAM 381

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
           ++   ++ +  K+G  L+  +  SLI MY++ G +E A + F S+  +++  ++ M+   
Sbjct: 382 DLGGWIHVYIKKQGIKLNFHITTSLIDMYSKCGHLEKALEVFYSVERRDVFVWSAMIAGL 441

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESN 523
           A + +   A +L  ++++T V  +A TF +LL   S  G + +G     ++    G    
Sbjct: 442 AMHGHGRAAIDLFSKMQETKVKPNAVTFTNLLCACSHSGLVDEGRLFFNQMRPVYGVVPG 501

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEM 550
              Y  ++ +  R   +E A ++ ++M
Sbjct: 502 SKHYACMVDILGRAGCLEEAVELIEKM 528



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 136/526 (25%), Positives = 243/526 (46%), Gaps = 75/526 (14%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           +Q  +  + ++ +    P+  T+  ++K+     +   G+ +H ++ ++    +  I NS
Sbjct: 112 IQGLLVFIQMLHESQRFPNSYTFPFVIKAATEVSSLLAGQAIHGMVMKASFGSDLFISNS 171

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           LI  YS  GDL+ A  +F  +  K DIVSW+SMIS +V  G   +A+ +F  M      P
Sbjct: 172 LIHFYSSLGDLDSAYLVFSKIVEK-DIVSWNSMISGFVQGGSPEEALQLFKRMKMENARP 230

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           N      V+ AC+   ++  G     ++ + G  D ++ +  A++DM+VK GS  LE A 
Sbjct: 231 NRVTMVGVLSACAKRIDLEFGRWACDYIERNG-IDINLILSNAMLDMYVKCGS--LEDAR 287

Query: 238 KVFDKMTEKNTVGWTLM-------------------------------ITRCTQLGCPRD 266
           ++FDKM EK+ V WT M                               I+   Q G P++
Sbjct: 288 RLFDKMEEKDIVSWTTMIDGYAKVGDYDAARRVFDVMPREDITAWNALISSYQQNGKPKE 347

Query: 267 AIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           A+ +F ++ L+    P+  TL+  ++AC++L     G  +H +  + G+ L+  +  SL+
Sbjct: 348 ALAIFRELQLNKNTKPNEVTLASTLAACAQLGAMDLGGWIHVYIKKQGIKLNFHITTSLI 407

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DMY+KC   G ++ + +VF  +   +V  W+A+I G     G  + A+ LFS M + +V 
Sbjct: 408 DMYSKC---GHLEKALEVFYSVERRDVFVWSAMIAGLAMH-GHGRAAIDLFSKMQETKVK 463

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           PN  TF ++L AC            ++  V  GR       N +  +Y   G +  ++  
Sbjct: 464 PNAVTFTNLLCACS-----------HSGLVDEGRLF----FNQMRPVY---GVVPGSKH- 504

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
                      Y  MVD   +    E+A EL   IE   +  SA  + +LL      G +
Sbjct: 505 -----------YACMVDILGRAGCLEEAVEL---IEKMPIVPSASVWGALLGACRIYGNV 550

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
              E   +R++++   +NH  Y  L ++Y++    +   ++ + M+
Sbjct: 551 ELAEMACSRLLETD-SNNHGAYVLLSNIYAKAGKWDCVSRLRQHMK 595


>gi|359483532|ref|XP_002265722.2| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 824

 Score =  479 bits (1232), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 237/631 (37%), Positives = 382/631 (60%), Gaps = 9/631 (1%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +ESA K+FD++ +++ + W  MI+     G     + LF  M+L G   D  T+  VV+ 
Sbjct: 201 VESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAG 260

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS   +   G+ LH +AI+     ++ +   L+DMY+K    G+++ + +VF+ M + +V
Sbjct: 261 CSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSK---SGNLNSAIQVFETMGERSV 317

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG--NLLDSNVAEQV 410
           +SWT++I GY + G  D  +V+LF +M +  ++P+ FT  ++L AC    LL++   + V
Sbjct: 318 VSWTSMIAGYAREGLSDM-SVRLFHEMEKEGISPDIFTITTILHACACTGLLEN--GKDV 374

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + +  +     D  V N+L+ MYA+ G M DA   F  +  K++VS+NTM+  Y+KN   
Sbjct: 375 HNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLP 434

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
            +A  L  E++      S  T A +L   +S+ A+ +G++IH  I+++GF  +  + NAL
Sbjct: 435 NEALNLFVEMQYNSKPNS-ITMACILPACASLAALERGQEIHGHILRNGFSLDRHVANAL 493

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MY +C  +  A  +F  + +++++SWT MI G+  HG+ + A+  F +M   GI+P+ 
Sbjct: 494 VDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIEPDE 553

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +++I++L ACSH+GL+ EGW  F  M +   I  + EHYAC+VDLL R+G+L++A +FI+
Sbjct: 554 VSFISILYACSHSGLLDEGWGFFNMMRNNCCIEPKSEHYACIVDLLARAGNLSKAYKFIK 613

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
            MP+  D  +W   L  CR++ D +L +  AE + E +P++   ++LL+N+YA A  WE 
Sbjct: 614 MMPIEPDATIWGALLCGCRIYHDVKLAEKVAEHVFELEPENTGYYVLLANIYAEAEKWEE 673

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V  +R+R+  R L K  GCSWIE   KVH F  G++SHP   +I   L +   ++KE G+
Sbjct: 674 VKKLRERIGRRGLRKNPGCSWIEIKGKVHIFVTGDSSHPLANKIELLLKKTRTRMKEEGH 733

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
            P   + L + ++ +K   L  HSEKIA+AFG++S    K +RV KNLRVCGDCH   K+
Sbjct: 734 FPKMRYALIKADDTEKEMALCGHSEKIAMAFGILSLPPGKTVRVTKNLRVCGDCHEMAKF 793

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +S +  R+I+LRDSNRFHH KDG CSC  +W
Sbjct: 794 MSKMVKRDIILRDSNRFHHFKDGSCSCRGHW 824



 Score =  237 bits (605), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 158/565 (27%), Positives = 279/565 (49%), Gaps = 73/565 (12%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLD--TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           G +++A   ++L+ Q    PDL+  TY  +L+ C   ++   G+ +HS++  + +E + V
Sbjct: 82  GNLRRA---MELINQSPK-PDLELRTYCSVLQLCADLKSIQDGRRIHSIIQSNDVEVDGV 137

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNK-------------------------------- 142
           + + L+ +Y  CGDL E  +IF  + N+                                
Sbjct: 138 LGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRESLSLFKRMRELG 197

Query: 143 ----------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
                           RD++SW+SMIS YV+ G     + +F +ML LG   +     +V
Sbjct: 198 IRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLLGINTDLATMVSV 257

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           +  CSNT  + +G  ++G+ +K   F  ++ +   L+DM+ K S +L SA +VF+ M E+
Sbjct: 258 VAGCSNTGMLLLGRALHGYAIKAS-FGKELTLNNCLLDMYSK-SGNLNSAIQVFETMGER 315

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V WT MI    + G    ++RLF +M   G  PD FT++ ++ AC+   L  +GK +H
Sbjct: 316 SVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACTGLLENGKDVH 375

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           ++     +  D+ V  +L+DMYAKC   GS+ D+  VF  M   +++SW  +I GY ++ 
Sbjct: 376 NYIKENKMQSDLFVSNALMDMYAKC---GSMGDAHSVFSEMQVKDIVSWNTMIGGYSKN- 431

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
               EA+ LF +M Q    PN  T A +L AC +L      ++++ H ++ G +LD  V 
Sbjct: 432 SLPNEALNLFVEM-QYNSKPNSITMACILPACASLAALERGQEIHGHILRNGFSLDRHVA 490

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+L+ MY + G +  AR  F+ + EK+LVS+  M+  Y  +    +A    +E+ ++G+ 
Sbjct: 491 NALVDMYLKCGALGLARLLFDMIPEKDLVSWTVMIAGYGMHGYGSEAIAAFNEMRNSGIE 550

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI------YNALISMYSRCANV 540
               +F S+L   S  G + +G      +      +N CI      Y  ++ + +R  N+
Sbjct: 551 PDEVSFISILYACSHSGLLDEGWGFFNMM-----RNNCCIEPKSEHYACIVDLLARAGNL 605

Query: 541 EAAFQVFKEME-DRNVISWTSMITG 564
             A++  K M  + +   W +++ G
Sbjct: 606 SKAYKFIKMMPIEPDATIWGALLCG 630



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 109/354 (30%), Positives = 195/354 (55%), Gaps = 12/354 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G  +K +   + M   G + DL T   ++  C  +    LG+ +H    ++     
Sbjct: 226 YVSNGLSEKGLDLFEQMLLLGINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKE 285

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N L+ +YSK G+LN A ++F++MG +R +VSW+SMI+ Y   G    ++ +F EM 
Sbjct: 286 LTLNNCLLDMYSKSGNLNSAIQVFETMG-ERSVVSWTSMIAGYAREGLSDMSVRLFHEME 344

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G  P+ +  + ++ AC+ T  +  G  ++ + +K     SD+ V  AL+DM+ K GS 
Sbjct: 345 KEGISPDIFTITTILHACACTGLLENGKDVHNY-IKENKMQSDLFVSNALMDMYAKCGS- 402

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +  A+ VF +M  K+ V W  MI   ++   P +A+ LF++M  +   P+  T++ ++ 
Sbjct: 403 -MGDAHSVFSEMQVKDIVSWNTMIGGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILP 460

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ L     G+++H   +R G +LD  V  +LVDMY KC   G++  +R +FD + + +
Sbjct: 461 ACASLAALERGQEIHGHILRNGFSLDRHVANALVDMYLKC---GALGLARLLFDMIPEKD 517

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLD 403
           ++SWT +I GY    G   EA+  F++M    + P+  +F S+L AC +  LLD
Sbjct: 518 LVSWTVMIAGYGMH-GYGSEAIAAFNEMRNSGIEPDEVSFISILYACSHSGLLD 570



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 224/476 (47%), Gaps = 68/476 (14%)

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR--FTLSGVVSACSELELFTSGKQLHSW 308
           + + I R  +LG  R A    +++I     PD    T   V+  C++L+    G+++HS 
Sbjct: 71  YNIEICRFCELGNLRRA----MELINQSPKPDLELRTYCSVLQLCADLKSIQDGRRIHSI 126

Query: 309 AIRTGLALDVCVGCSLVDMYAKC-----------------------TVDG---------- 335
                + +D  +G  LV MY  C                        ++G          
Sbjct: 127 IQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRES 186

Query: 336 -------------SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
                         V+ +RK+FD + D +V+SW ++I+GYV S G  ++ + LF  M+  
Sbjct: 187 LSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYV-SNGLSEKGLDLFEQMLLL 245

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            +  +  T  SV+  C N     +   ++ +A+K     +  + N L+ MY++SG +  A
Sbjct: 246 GINTDLATMVSVVAGCSNTGMLLLGRALHGYAIKASFGKELTLNNCLLDMYSKSGNLNSA 305

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
            + FE++ E+++VS+ +M+  YA+   S+ +  L HE+E  G+    +T  ++L   +  
Sbjct: 306 IQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACACT 365

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           G +  G+ +H  I ++  +S+  + NAL+ MY++C ++  A  VF EM+ ++++SW +MI
Sbjct: 366 GLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIVSWNTMI 425

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            G++K+     AL +F +M  +  KPN IT   +L AC+    +  G        + HG 
Sbjct: 426 GGYSKNSLPNEALNLFVEMQYNS-KPNSITMACILPACASLAALERG-------QEIHGH 477

Query: 623 VQRM-----EHYA-CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           + R       H A  +VD+  + G+L  A      +P   D++ W   +    +HG
Sbjct: 478 ILRNGFSLDRHVANALVDMYLKCGALGLARLLFDMIP-EKDLVSWTVMIAGYGMHG 532



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 98/218 (44%), Gaps = 15/218 (6%)

Query: 48  NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS 107
           N +I   +   +      L +  Q  + P+  T + +L +C        G+ +H  + R+
Sbjct: 422 NTMIGGYSKNSLPNEALNLFVEMQYNSKPNSITMACILPACASLAALERGQEIHGHILRN 481

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
               +  + N+L+ +Y KCG L  A  +F  M  ++D+VSW+ MI+ Y   G   +AI  
Sbjct: 482 GFSLDRHVANALVDMYLKCGALGLARLLF-DMIPEKDLVSWTVMIAGYGMHGYGSEAIAA 540

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG------CA 221
           F EM   G  P+E  F +++ ACS++  +  G   +GF        ++ C+         
Sbjct: 541 FNEMRNSGIEPDEVSFISILYACSHSGLLDEG---WGFF---NMMRNNCCIEPKSEHYAC 594

Query: 222 LIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           ++D+  +   +L  AYK    M  E +   W  ++  C
Sbjct: 595 IVDLLARAG-NLSKAYKFIKMMPIEPDATIWGALLCGC 631



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 64/355 (18%), Positives = 132/355 (37%), Gaps = 87/355 (24%)

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +  YN  +  + +  N  +A EL+++     +     T+ S+L   + + +I  G +IH+
Sbjct: 68  ITDYNIEICRFCELGNLRRAMELINQSPKPDL--ELRTYCSVLQLCADLKSIQDGRRIHS 125

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK------ 567
            I  +  E +  + + L+ MY  C ++    ++F ++ +  V  W  ++ G+AK      
Sbjct: 126 IIQSNDVEVDGVLGSKLVFMYVTCGDLREGRRIFDKVANEKVFLWNLLMNGYAKIGNFRE 185

Query: 568 -------------------------------------------HGFAARALEIFYKMLAD 584
                                                      +G + + L++F +ML  
Sbjct: 186 SLSLFKRMRELGIRRVESARKLFDELGDRDVISWNSMISGYVSNGLSEKGLDLFEQMLLL 245

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
           GI  +  T ++V++ CS+ G++  G +       +    + +    C++D+  +SG+L  
Sbjct: 246 GINTDLATMVSVVAGCSNTGMLLLG-RALHGYAIKASFGKELTLNNCLLDMYSKSGNLNS 304

Query: 645 ALEFIRSM----------------------------------PLSADVLVWRTFLGACRV 670
           A++   +M                                   +S D+    T L AC  
Sbjct: 305 AIQVFETMGERSVVSWTSMIAGYAREGLSDMSVRLFHEMEKEGISPDIFTITTILHACAC 364

Query: 671 HGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
            G  E GK     I E   Q D      L ++YA  G      ++   M+ ++++
Sbjct: 365 TGLLENGKDVHNYIKENKMQSDLFVSNALMDMYAKCGSMGDAHSVFSEMQVKDIV 419


>gi|147856413|emb|CAN82500.1| hypothetical protein VITISV_004914 [Vitis vinifera]
          Length = 1408

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/825 (32%), Positives = 436/825 (52%), Gaps = 67/825 (8%)

Query: 96   LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            LG LV   L + K  P++   N LIS Y   GD   A  +F  +G  R+ + W+S +  +
Sbjct: 592  LGALVMIKLPQ-KWNPDAAAKN-LISSYLGFGDFWSAAMVF-YVGLPRNYLKWNSFVEEF 648

Query: 156  VNRGKQVD-AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
             +    +   + +F E+   G   +   +S  ++ C+   ++ +G  I+G L+K G FD 
Sbjct: 649  KSSAGSLHIVLEVFKELHGKGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRG-FDL 707

Query: 215  DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            DV + CAL++ + +    LE A +VF +M     + W   I    Q    +  + LF  M
Sbjct: 708  DVYLRCALMNFYGR-CWGLEKANQVFHEMPNPEALLWNEAIILNLQSEKLQKGVELFRKM 766

Query: 275  ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
              S    +  T+  V+ AC ++    + KQ+H +  R GL  DV +   L+ MY+K   +
Sbjct: 767  QFSFLKAETATIVRVLQACGKMGALNAAKQIHGYVFRFGLDSDVSLCNPLISMYSK---N 823

Query: 335  GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---------------------------- 366
            G ++ +R+VFD M + N  SW ++I+ Y   G                            
Sbjct: 824  GKLELARRVFDSMENRNTSSWNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLL 883

Query: 367  ------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
                  G  +E + +   M      PN  +  SVL+A   L   N+ ++ + + ++ G  
Sbjct: 884  SGHFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFD 943

Query: 421  LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
             D  VG SLI MY ++  +  A+  F+++  +N+ ++N++V  Y+     E A  LL+++
Sbjct: 944  CDVYVGTSLIDMYVKNHSLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQM 1003

Query: 481  EDTGVGTSAYTFASLLSG------------------------ASSIGAIGKGEQIHARII 516
            E  G+     T+  ++SG                         +S+  + KG++IH   I
Sbjct: 1004 EKEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSI 1063

Query: 517  KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
            ++GF  +  +  ALI MYS+ ++++ A +VF+ ++++ + SW  MI GFA  G    A+ 
Sbjct: 1064 RNGFIEDVFVATALIDMYSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAIS 1123

Query: 577  IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
            +F +M   G+ P+ IT+ A+LSAC ++GLI EGWK+F SM  ++ IV R+EHY CMVDLL
Sbjct: 1124 VFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDLL 1183

Query: 637  GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
            GR+G L EA + I +MPL  D  +W   LG+CR+H +    + AA+ + + +P + A +I
Sbjct: 1184 GRAGYLDEAWDLIHTMPLKPDATIWGALLGSCRIHKNLXFAETAAKNLFKLEPNNSANYI 1243

Query: 697  LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
            L+ NLY+    WE + ++R+ M    +      SWI+ + +VH F   E  HP   +IY 
Sbjct: 1244 LMMNLYSIFNRWEDMDHLRELMGAAGVRNRQVWSWIQINQRVHVFSSDEKPHPDAGKIYF 1303

Query: 757  ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            EL QL  ++K+ GY+PD N V   ++E +K + L  H+EK+A+ +GLI     +PIRV K
Sbjct: 1304 ELYQLVSEMKKLGYVPDVNCVYQNMDEVEKQKILLSHTEKLAITYGLIKMKAGEPIRVIK 1363

Query: 817  NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            N R+C DCH+A KYIS+V  RE+ LRD  RFHH ++GKCSCND+W
Sbjct: 1364 NTRICSDCHSAAKYISLVKARELFLRDGVRFHHFREGKCSCNDFW 1408



 Score =  196 bits (499), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 152/588 (25%), Positives = 264/588 (44%), Gaps = 99/588 (16%)

Query: 72   KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
            KG   D + YS+ LK+C R  +  LG  +H  L +   + +  +  +L++ Y +C  L +
Sbjct: 668  KGVVFDSEVYSVALKTCTRVMDIWLGMEIHGCLIKRGFDLDVYLRCALMNFYGRCWGLEK 727

Query: 132  ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC-FSAVIRAC 190
            AN++F  M N   ++ W+  I   +   K    + +F +M +  F   E      V++AC
Sbjct: 728  ANQVFHEMPNPEALL-WNEAIILNLQSEKLQKGVELFRKM-QFSFLKAETATIVRVLQAC 785

Query: 191  SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
                 +     I+G++ + G  DSDV +   LI M+ K    LE A +VFD M  +NT  
Sbjct: 786  GKMGALNAAKQIHGYVFRFG-LDSDVSLCNPLISMYSKNG-KLELARRVFDSMENRNTSS 843

Query: 251  WTLMITRCTQLGCPRDAIRLFLDM--------------ILS------------------- 277
            W  MI+    LG   DA  LF ++              +LS                   
Sbjct: 844  WNSMISSYAALGFLNDAWSLFYELESSDMKPDIVTWNCLLSGHFLHGYKEEVLNILQRMQ 903

Query: 278  --GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
              GF P+  +++ V+ A SEL     GK+ H + +R G   DV VG SL+DMY K   + 
Sbjct: 904  GEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCDVYVGTSLIDMYVK---NH 960

Query: 336  SVDDSRKVFDRMLDHNVMSWTAIITGYVQSG----------GRDKEAVK----LFSDMIQ 381
            S+  ++ VFD M + N+ +W ++++GY   G            +KE +K     ++ MI 
Sbjct: 961  SLXSAQAVFDNMKNRNIFAWNSLVSGYSFKGMFEDALRLLNQMEKEGIKPDLVTWNGMIS 1020

Query: 382  G---------QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
            G            PN  +   +L+AC +L      ++++  +++ G   D  V  +LI M
Sbjct: 1021 GYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIRNGFIEDVFVATALIDM 1080

Query: 433  YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
            Y++S  +++A K F  +  K L S+N M+  +A     ++A  + +E++  GVG  A TF
Sbjct: 1081 YSKSSSLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAISVFNEMQKVGVGPDAITF 1140

Query: 493  ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
             +LLS   + G IG+G +                ++++I+ Y     +E           
Sbjct: 1141 TALLSACKNSGLIGEGWK---------------YFDSMITDYRIVPRLE----------- 1174

Query: 553  RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
                 +  M+    + G+   A ++ + M    +KP+   + A+L +C
Sbjct: 1175 ----HYCCMVDLLGRAGYLDEAWDLIHTM---PLKPDATIWGALLGSC 1215



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 85/333 (25%), Positives = 151/333 (45%), Gaps = 32/333 (9%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            H   G  ++ +  L  M  +G  P+  + + +L++       ++GK  H  + R+  + +
Sbjct: 886  HFLHGYKEEVLNILQRMQGEGFKPNSSSMTSVLQAISELGFLNMGKETHGYVLRNGFDCD 945

Query: 113  SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
              +  SLI +Y K   L  A  +F +M N R+I +W+S++S Y  +G   DA+ +  +M 
Sbjct: 946  VYVGTSLIDMYVKNHSLXSAQAVFDNMKN-RNIFAWNSLVSGYSFKGMFEDALRLLNQME 1004

Query: 173  ELG------------------------FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
            + G                        F PN    + ++RAC++   +  G  I+   ++
Sbjct: 1005 KEGIKPDLVTWNGMISGYAMWGCARKAFMPNSASITCLLRACASLSLLQKGKEIHCLSIR 1064

Query: 209  CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
             G+ + DV V  ALIDM+ K S  L++A+KVF ++  K    W  MI      G  ++AI
Sbjct: 1065 NGFIE-DVFVATALIDMYSKSS-SLKNAHKVFRRIQNKTLASWNCMIMGFAIFGLGKEAI 1122

Query: 269  RLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDM 327
             +F +M   G  PD  T + ++SAC    L   G K   S      +   +   C +VD+
Sbjct: 1123 SVFNEMQKVGVGPDAITFTALLSACKNSGLIGEGWKYFDSMITDYRIVPRLEHYCCMVDL 1182

Query: 328  YAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAII 359
              +    G +D++  +   M L  +   W A++
Sbjct: 1183 LGRA---GYLDEAWDLIHTMPLKPDATIWGALL 1212


>gi|92870988|gb|ABE80149.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 766

 Score =  478 bits (1231), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/755 (35%), Positives = 429/755 (56%), Gaps = 37/755 (4%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +P+ +  N  IS + + G  + A  +F +M  +R  VS+++MIS Y+   K   A ++F 
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTM-PRRSSVSYNAMISGYLRNSKFNLARNLFD 104

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
           +M      P    FS  +       N  +G     F L     + DV    +L+  + + 
Sbjct: 105 QM------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMP---EKDVVSWNSLLSGYAQN 155

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G VD   A +VFD M EKN++ W  ++      G   +A  LF          +  +   
Sbjct: 156 GYVD--EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----------ESKSDWD 203

Query: 289 VVSACSELELFTSGKQLHS--WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ++S    +  F   K+L    W        D     +++  YA+    G +  +R++FD 
Sbjct: 204 LISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQ---GGGLSQARRLFDE 260

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
               +V +WTA+++GYVQ+G  D EA   F +M +     N  ++ +++         ++
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLD-EAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDI 315

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           A +++     R    +    N++I+ Y + G +  ARK F+ + +++ VS+  ++  YA+
Sbjct: 316 ARELFESMPCR----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ 371

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           + + E+A  +  EI+  G   +  TF   LS  + I A+  G+QIH + +K G+ +   +
Sbjct: 372 SGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFV 431

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            NAL++MY +C +++ A   F+ +E+++V+SW +M+ G+A+HGF  +AL +F  M   G+
Sbjct: 432 GNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV 491

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+ IT + VLSACSH GL+  G ++F SM  ++G++   +HY CM+DLLGR+G L EA 
Sbjct: 492 KPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQ 551

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           + IR+MP       W   LGA R+HG+TELG+ AAEM+ + +PQ+   ++LLSNLYA++G
Sbjct: 552 DLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W     +R +M++  + K  G SW+E  NK+H F VG+ SHP+   IYA L++L LK++
Sbjct: 612 RWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+  T  VLH++EEE+K   L  HSEK+AVAFG+++    +PIRV KNLRVC DCH+
Sbjct: 672 EEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHS 731

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK+IS + GR I+LRDS+RFHH  +G CSC DYW
Sbjct: 732 AIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     + Q G   +  T+   L +C       LGK +H    +        + 
Sbjct: 373 GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVG 432

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+++Y KCG ++EAN  F+ +  ++D+VSW++M++ Y   G    A+ +F  M   G 
Sbjct: 433 NALLAMYFKCGSIDEANDTFEGI-EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV 491

Query: 177 CPNEYCFSAVIRACSNT 193
            P+E     V+ ACS+T
Sbjct: 492 KPDEITMVGVLSACSHT 508



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 54/319 (16%)

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           +E V  +   R +  D    N  IS + R+G  + A   F ++  ++ VSYN M+  Y +
Sbjct: 33  SESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLR 92

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N      F L   + D                           Q+  R + S        
Sbjct: 93  N----SKFNLARNLFD---------------------------QMPERDLFS-------- 113

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +N +++ Y R   +  A ++F  M +++V+SW S+++G+A++G+   A E+F  M     
Sbjct: 114 WNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM----P 169

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           + N I++  +L+A  H G I E    F S  D   I      + C++    R   L +A 
Sbjct: 170 EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI-----SWNCLMGGFVRKKKLGDAR 224

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASA 705
                MP+  D + W T +      G    G   A  + ++ P +D      + + Y   
Sbjct: 225 WLFDKMPVR-DAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQN 279

Query: 706 GHWEYVANIRKRMKERNLI 724
           G  +        M E+N +
Sbjct: 280 GMLDEAKTFFDEMPEKNEV 298


>gi|356551789|ref|XP_003544256.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 758

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 254/691 (36%), Positives = 405/691 (58%), Gaps = 19/691 (2%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           +  +++ C +T + +   I++G ++K G  D +  V   L++++ K   ++E A +VFD 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHD-NFFVMSFLVNVYAKCG-NMEDARRVFDN 127

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M  +N V WT ++    Q   P+ AI +F +M+ +G  P  +TLS V+ ACS L+    G
Sbjct: 128 MLRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLG 187

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
            Q H++ I+  +  D  VG +L  +Y+KC   G ++D+ K F R+ + NV+SWT+ ++  
Sbjct: 188 DQFHAYIIKYHVDFDASVGSALCSLYSKC---GRLEDALKTFSRIREKNVISWTSAVSAC 244

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
             +G   K  ++LF +MI   + PN FT  S L  C  +L   +  QVY+  +K G   +
Sbjct: 245 ADNGAPVK-GLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESN 303

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK-------NLNS----E 471
             V NSL+ +Y +SG + +A + F  + + ++V++N M+  +A+       NL++     
Sbjct: 304 LRVRNSLLYLYLKSGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS 363

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A +L  ++  +G+    +T +S+LS  S + AI +GEQIHA+ IK+GF S+  +  +LI
Sbjct: 364 EALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 423

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           SMYS+C ++E A + F EM  R +I+WTSMITGF++HG + +AL IF  M   G++PN +
Sbjct: 424 SMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAV 483

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++ VLSACSHAG++S+   +F  M  ++ I   M+HY CMVD+  R G L +AL FI+ 
Sbjct: 484 TFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIKK 543

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M       +W  F+  C+ HG+ ELG +AAE +L   P+DP  ++LL N+Y SA  +E V
Sbjct: 544 MNYEPSEFIWSNFIAGCKSHGNLELGFYAAEQLLSLKPKDPETYVLLLNMYLSAERFEDV 603

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY- 770
           + +RK M+E  + K    SWI   +KV+ F     +HP++  I   L+ L  K+K  GY 
Sbjct: 604 SRVRKMMEEEKVGKLKDWSWISIKDKVYSFKTNGKTHPQSSLICKSLEDLLAKVKNVGYE 663

Query: 771 -LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
            L        E EEE+       HSEK+A+ FGL +   S PIRV K+  +C D H  IK
Sbjct: 664 MLESVEISDEEEEEEKTSSPNIYHSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIK 723

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           Y+S + GREI+++DS R H   +G+CSC ++
Sbjct: 724 YVSTLAGREIIVKDSKRLHKFANGECSCGNF 754



 Score =  265 bits (676), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 148/502 (29%), Positives = 276/502 (54%), Gaps = 20/502 (3%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y  LL+ C+ +R++   ++VH  + ++    N  +++ L+++Y+KCG++ +A ++F +M 
Sbjct: 70  YVPLLQQCLDTRSYSETQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFDNML 129

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            +R++V+W++++  +V   +   AIH+F EML  G  P+ Y  SAV+ ACS+ +++ +G 
Sbjct: 130 -RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSVYTLSAVLHACSSLQSLKLGD 188

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
             + +++K  + D D  VG AL  ++ K    LE A K F ++ EKN + WT  ++ C  
Sbjct: 189 QFHAYIIKY-HVDFDASVGSALCSLYSKCG-RLEDALKTFSRIREKNVISWTSAVSACAD 246

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G P   +RLF++MI     P+ FTL+  +S C E+     G Q++S  I+ G   ++ V
Sbjct: 247 NGAPVKGLRLFVEMIAVDIKPNEFTLTSALSQCCEILSLELGTQVYSLCIKFGYESNLRV 306

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ----------SGGRDK 370
             SL+ +Y K    G + ++ ++F+RM D ++++W A+I G+ Q          +  R  
Sbjct: 307 RNSLLYLYLK---SGCIVEAHRLFNRMDDASMVTWNAMIAGHAQMMELTKDNLSACHRGS 363

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+KLFS +    + P+ FT +SVL  C  +L     EQ++   +K G   D  V  SLI
Sbjct: 364 EALKLFSKLNLSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 423

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           SMY++ G +E A KAF  +  + ++++ +M+  ++++  S++A  +  ++   GV  +A 
Sbjct: 424 SMYSKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNAV 483

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFK 548
           TF  +LS  S  G + +    +  I++  ++    +  Y  ++ M+ R   +E A    K
Sbjct: 484 TFVGVLSACSHAGMVSQALN-YFEIMQKKYKIKPAMDHYECMVDMFVRLGRLEQALNFIK 542

Query: 549 EME-DRNVISWTSMITGFAKHG 569
           +M  + +   W++ I G   HG
Sbjct: 543 KMNYEPSEFIWSNFIAGCKSHG 564


>gi|413946157|gb|AFW78806.1| hypothetical protein ZEAMMB73_634908 [Zea mays]
          Length = 1145

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 269/773 (34%), Positives = 434/773 (56%), Gaps = 48/773 (6%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N++++ Y     + EA  +F+ M  +R+ VSW+ MIS YV   +   A  MF  ML  G 
Sbjct: 161 NTMLTGYCHSQLMEEARNLFERM-PERNGVSWTVMISGYVLIEQHGRAWDMFRTMLCEGM 219

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P +    +V+ A  +     I   I+  + K G F+ DV VG A+++ + K    L+SA
Sbjct: 220 TPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTG-FERDVVVGTAILNGYTKDVNMLDSA 278

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT-LSGVVSACSE 295
            K F+ M  +N   W+ +I   +Q G   DA  ++    L   +P R + L+G+      
Sbjct: 279 VKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS-VPSRTSMLTGLARYGRI 337

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
            +      Q+H          +V    +++  Y +  +   VD++  +F+RM   N +SW
Sbjct: 338 DDAKILFDQIHE--------PNVVSWNAMITGYMQNEM---VDEAEDLFNRMPFRNTISW 386

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
             +I GY ++G R ++A+     + +  + P+  +  S   AC N+      +QV++ AV
Sbjct: 387 AGMIAGYARNG-RSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAV 445

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K G   +  V N+LI++Y +   +   R+ F+ +  K+ VSYN+ + A  +N   ++A +
Sbjct: 446 KAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARD 505

Query: 476 LLHEIEDTGV---------------GTSAY----------------TFASLLSGASSIGA 504
           + + +    V               G  A                     LL  + ++GA
Sbjct: 506 VFNNMPSPDVVSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGA 565

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
              G+QIH   IK G +S   + NAL+SMY +C++ ++  +VF  ME+R++ +W ++ITG
Sbjct: 566 PQLGQQIHTIAIKLGMDSGLVVANALVSMYFKCSSADS-LKVFDSMEERDIFTWNTIITG 624

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +A+HG    A+ ++  M++ G+ PN +T++ +L ACSH+GL+ EG + F+SM  ++G+  
Sbjct: 625 YAQHGLGREAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTP 684

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
            +EHYACMVDLLGR+G +  A  FI  MP+  D ++W   LGAC++H + E+G+ AAE +
Sbjct: 685 LLEHYACMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKL 744

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
              +P +   +++LSN+Y+S G W+ VA +RK MKER + K+ GCSW++  NK+H F  G
Sbjct: 745 FSIEPSNAGNYVMLSNIYSSQGMWDEVAKVRKLMKERGVNKDPGCSWMQIKNKMHSFVTG 804

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           +  H +   IYA L +L   +K  GY+PDT+FVLH+++EEQK   L  HSEK+AVA+GL+
Sbjct: 805 DEEHEQIQNIYATLWELYTLLKATGYVPDTDFVLHDIDEEQKESSLLYHSEKLAVAYGLL 864

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
            T K  PI++ KNLR+CGDCHT IK++S VT REI +RD NRFHH ++G CSC
Sbjct: 865 VTPKGMPIQIMKNLRICGDCHTFIKFVSSVTKREIDVRDGNRFHHFRNGSCSC 917



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 134/555 (24%), Positives = 257/555 (46%), Gaps = 45/555 (8%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P +   ++ I    + G L+EA ++F SM   RDI++W+SMI +Y N G   DA     +
Sbjct: 31  PGTSAQSARIRELGRLGRLHEAREVFDSM-PFRDIIAWNSMIFAYCNNGMP-DAGRSLAD 88

Query: 171 MLELG------FCPNEYCFSAVIRACSNT-ENVAIGHII-YGFLLKCGYFDSDVCVGCAL 222
            +  G         + Y  +  +R      + + + + + +  ++ C   + D+ +   L
Sbjct: 89  AISGGNLRTGTILLSGYARAGRVRDARRVFDGMGVRNTVAWNAMVTCYVQNGDITLARKL 148

Query: 223 IDMFVKGSVD--------------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
            D      V               +E A  +F++M E+N V WT+MI+    +     A 
Sbjct: 149 FDAMPSRDVSSWNTMLTGYCHSQLMEEARNLFERMPERNGVSWTVMISGYVLIEQHGRAW 208

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
            +F  M+  G  P++  L  V+SA   L      + +H    +TG   DV VG ++++ Y
Sbjct: 209 DMFRTMLCEGMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGY 268

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
            K      +D + K F+ M   N  +W+ II    Q+G  D        D ++    P+ 
Sbjct: 269 TKDV--NMLDSAVKFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKS--VPSR 324

Query: 389 FTFASVLKACGNLLDSNVA-EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            +  + L   G + D+ +  +Q++   V           N++I+ Y ++  +++A   F 
Sbjct: 325 TSMLTGLARYGRIDDAKILFDQIHEPNV--------VSWNAMITGYMQNEMVDEAEDLFN 376

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            +  +N +S+  M+  YA+N  SE+A   L  +   G+  S  +  S     S+I A+  
Sbjct: 377 RMPFRNTISWAGMIAGYARNGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALET 436

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+Q+H+  +K+G + N  + NALI++Y +  ++ +  Q+F  M  ++ +S+ S ++   +
Sbjct: 437 GKQVHSLAVKAGCQFNSYVCNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQ 496

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           +     A ++F  M +    P+ +++  ++SAC+ A   +E  + FRSM  E    + + 
Sbjct: 497 NNLFDEARDVFNNMPS----PDVVSWTTIISACAQADQGNEAVEIFRSMLHE----RELP 548

Query: 628 HYACMVDLLGRSGSL 642
           +   +  LLG SG+L
Sbjct: 549 NPPILTILLGLSGNL 563



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 138/573 (24%), Positives = 246/573 (42%), Gaps = 72/573 (12%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +PN V + S +    K G L   + +    G +RD+V  +++++ Y    K V+ +   V
Sbjct: 223 QPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAILNGYT---KDVNMLDSAV 279

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF---------------LLKCGYFDS 214
           +  E     NEY +S +I A S    +     +Y                 L + G  D 
Sbjct: 280 KFFEGMAARNEYTWSTIIAALSQAGRIDDAFAVYQRDPLKSVPSRTSMLTGLARYGRIDD 339

Query: 215 -----------DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
                      +V    A+I  +++  + ++ A  +F++M  +NT+ W  MI    + G 
Sbjct: 340 AKILFDQIHEPNVVSWNAMITGYMQNEM-VDEAEDLFNRMPFRNTISWAGMIAGYARNGR 398

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
              A+     +   G LP   +L+    ACS +E   +GKQ+HS A++ G   +  V  +
Sbjct: 399 SEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYVCNA 458

Query: 324 LVDMYAKCTVDGSV----------------------------DDSRKVFDRMLDHNVMSW 355
           L+ +Y K    GSV                            D++R VF+ M   +V+SW
Sbjct: 459 LITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDVVSW 518

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           T II+   Q+  +  EAV++F  M+  +  PN      +L   GNL    + +Q++T A+
Sbjct: 519 TTIISACAQA-DQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTIAI 577

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K G      V N+L+SMY +     D+ K F+S+ E+++ ++NT++  YA++    +A  
Sbjct: 578 KLGMDSGLVVANALVSMYFKCSS-ADSLKVFDSMEERDIFTWNTIITGYAQHGLGREAIR 636

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMY 534
           +   +   GV  +  TF  LL   S  G + +G Q    +    G       Y  ++ + 
Sbjct: 637 MYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLTPLLEHYACMVDLL 696

Query: 535 SRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKP-N 589
            R  +V+ A     +M  + + + W++++     H       RA E  +      I+P N
Sbjct: 697 GRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAEKLFS-----IEPSN 751

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
              Y+ + +  S  G+  E  K  R +  E G+
Sbjct: 752 AGNYVMLSNIYSSQGMWDEVAK-VRKLMKERGV 783



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 106/386 (27%), Positives = 173/386 (44%), Gaps = 57/386 (14%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +GR ++A+ +L  + +KG  P L + +    +C        GK VHSL  ++  + NS +
Sbjct: 396 NGRSEQALVSLQALHRKGMLPSLSSLTSSFFACSNIEALETGKQVHSLAVKAGCQFNSYV 455

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKR------------------------------DI 145
            N+LI+LY K   +    +IF  M  K                               D+
Sbjct: 456 CNALITLYGKYRSIGSVRQIFDRMTVKDTVSYNSFMSALVQNNLFDEARDVFNNMPSPDV 515

Query: 146 VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           VSW+++IS+     +  +A+ +F  ML     PN    + ++    N     +G  I+  
Sbjct: 516 VSWTTIISACAQADQGNEAVEIFRSMLHERELPNPPILTILLGLSGNLGAPQLGQQIHTI 575

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
            +K G  DS + V  AL+ M+ K S     + KVFD M E++   W  +IT   Q G  R
Sbjct: 576 AIKLG-MDSGLVVANALVSMYFKCSS--ADSLKVFDSMEERDIFTWNTIITGYAQHGLGR 632

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSL 324
           +AIR++  M+ +G LP+  T  G++ ACS   L   G Q   S +   GL         L
Sbjct: 633 EAIRMYQLMVSAGVLPNEVTFVGLLHACSHSGLVDEGHQFFKSMSSDYGLT-------PL 685

Query: 325 VDMYAKCTVD-----GSVDDSRK-VFDRMLDHNVMSWTAI-----ITGYVQSGGRDKEAV 373
           ++ YA C VD     G V  +   ++D  ++ + + W+A+     I   V+ G R  E  
Sbjct: 686 LEHYA-CMVDLLGRAGDVQGAEHFIYDMPIEPDSVIWSALLGACKIHKNVEIGRRAAE-- 742

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACG 399
           KLFS  I+   A N+   +++  + G
Sbjct: 743 KLFS--IEPSNAGNYVMLSNIYSSQG 766



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 58/239 (24%), Positives = 104/239 (43%), Gaps = 16/239 (6%)

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I    R GR+ +AR+ F+S+  ++++++N+M+ AY  N   +    L   I     G + 
Sbjct: 40  IRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAGRSLADAIS----GGNL 95

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            T   LLSG +  G +        R+       N   +NA+++ Y +  ++  A ++F  
Sbjct: 96  RTGTILLSGYARAGRVRDAR----RVFDGMGVRNTVAWNAMVTCYVQNGDITLARKLFDA 151

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  R+V SW +M+TG+        A  +F +M     + NG+++  ++S           
Sbjct: 152 MPSRDVSSWNTMLTGYCHSQLMEEARNLFERM----PERNGVSWTVMISGYVLIEQHGRA 207

Query: 610 WKHFRSMYDEHGIVQRMEHYACM---VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           W  FR+M  E G+     +   +   V  LG+ G L      +       DV+V    L
Sbjct: 208 WDMFRTMLCE-GMTPEQPNLVSVLSAVRHLGKPGILESIHVLVHKTGFERDVVVGTAIL 265



 Score = 47.8 bits (112), Expect = 0.027,   Method: Compositional matrix adjust.
 Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 13/143 (9%)

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           +A I    R   +  A +VF  M  R++I+W SMI  +  +G          + LAD I 
Sbjct: 37  SARIRELGRLGRLHEAREVFDSMPFRDIIAWNSMIFAYCNNGMPDAG-----RSLADAIS 91

Query: 588 PNGI-TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
              + T   +LS  + AG + +     R ++D  G V+    +  MV    ++G +T A 
Sbjct: 92  GGNLRTGTILLSGYARAGRVRDA----RRVFDGMG-VRNTVAWNAMVTCYVQNGDITLAR 146

Query: 647 EFIRSMPLSADVLVWRTFL-GAC 668
           +   +MP S DV  W T L G C
Sbjct: 147 KLFDAMP-SRDVSSWNTMLTGYC 168


>gi|356529924|ref|XP_003533536.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Glycine max]
          Length = 694

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 242/645 (37%), Positives = 388/645 (60%), Gaps = 9/645 (1%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGF 279
           +L+ ++VK    L  A  +FD M  +N V W +++      G   + + LF +M+ L   
Sbjct: 55  SLVHLYVKCG-QLGLARNLFDAMPLRNVVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNA 113

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            P+ +  +  +SACS       G Q H    + GL     V  +LV MY++C+    V+ 
Sbjct: 114 CPNEYVFTTALSACSHGGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCS---HVEL 170

Query: 340 SRKVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           + +V D +     +++ S+ +++   V+SG R +EAV++   M+   VA +H T+  V+ 
Sbjct: 171 ALQVLDTVPGEHVNDIFSYNSVLNALVESG-RGEEAVEVLRRMVDECVAWDHVTYVGVMG 229

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
            C  + D  +  +V+   ++ G   D+ VG+ LI MY + G + +AR  F+ L  +N+V 
Sbjct: 230 LCAQIRDLQLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVV 289

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +  ++ AY +N   E++  L   ++  G   + YTFA LL+  + I A+  G+ +HAR+ 
Sbjct: 290 WTALMTAYLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVE 349

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K GF+++  + NALI+MYS+  ++++++ VF +M  R++I+W +MI G++ HG   +AL+
Sbjct: 350 KLGFKNHVIVRNALINMYSKSGSIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQ 409

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F  M++    PN +T+I VLSA SH GL+ EG+ +   +     I   +EHY CMV LL
Sbjct: 410 VFQDMVSAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALL 469

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
            R+G L EA  F+++  +  DV+ WRT L AC VH + +LG+  AE +L+ DP D   + 
Sbjct: 470 SRAGLLDEAENFMKTTQVKWDVVAWRTLLNACHVHRNYDLGRRIAESVLQMDPHDVGTYT 529

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YA A  W+ V  IRK M+ERN+ KE G SW++  N +H F    ++HP++++IY 
Sbjct: 530 LLSNMYAKARRWDGVVTIRKLMRERNIKKEPGASWLDIRNDIHVFLSEGSNHPESIQIYK 589

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
           ++ QL   IK  GY+P+   VLH++E+EQK  YL  HSEK+A+A+GL+      PIR+ K
Sbjct: 590 KVQQLLALIKPLGYVPNIASVLHDVEDEQKEGYLSYHSEKLALAYGLMKIPSPAPIRIIK 649

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLR+C DCHTA+K IS VT R I++RD+NRFHH +DG C+C D+W
Sbjct: 650 NLRMCDDCHTAVKLISKVTNRLIIVRDANRFHHFRDGSCTCLDHW 694



 Score =  200 bits (508), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 138/497 (27%), Positives = 253/497 (50%), Gaps = 30/497 (6%)

Query: 88  CIRSRNFHLGKLVHS-LLTRSKLEPNSVI--LNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           C   +    GK +H+  L R++   +S I  LNSL+ LY KCG L  A  +F +M   R+
Sbjct: 22  CADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKCGQLGLARNLFDAMP-LRN 80

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           +VSW+ +++ Y++ G  ++ + +F  M+ L   CPNEY F+  + ACS+   V  G   +
Sbjct: 81  VVSWNVLMAGYLHGGNHLEVLVLFKNMVSLQNACPNEYVFTTALSACSHGGRVKEGMQCH 140

Query: 204 GFLLKCGYFDSDVC---VGCALIDMFVKGSVDLESAYKVFDKMTEKNT---VGWTLMITR 257
           G L K G     VC   V  AL+ M+ + S  +E A +V D +  ++      +  ++  
Sbjct: 141 GLLFKFGL----VCHQYVKSALVHMYSRCS-HVELALQVLDTVPGEHVNDIFSYNSVLNA 195

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             + G   +A+ +   M+      D  T  GV+  C+++     G ++H+  +R GL  D
Sbjct: 196 LVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFD 255

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             VG  L+DMY KC   G V ++R VFD + + NV+ WTA++T Y+Q+G  + E++ LF+
Sbjct: 256 EFVGSMLIDMYGKC---GEVLNARNVFDGLQNRNVVVWTALMTAYLQNGYFE-ESLNLFT 311

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M +    PN +TFA +L AC  +      + ++    K G      V N+LI+MY++SG
Sbjct: 312 CMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHVIVRNALINMYSKSG 371

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++ +   F  +  ++++++N M+  Y+ +   ++A ++  ++       +  TF  +LS
Sbjct: 372 SIDSSYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLS 431

Query: 498 GASSIGAIGKG-----EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
             S +G + +G       +    I+ G E     Y  ++++ SR   ++ A    K  + 
Sbjct: 432 AYSHLGLVKEGFYYLNHLMRNFKIEPGLEH----YTCMVALLSRAGLLDEAENFMKTTQV 487

Query: 553 R-NVISWTSMITGFAKH 568
           + +V++W +++     H
Sbjct: 488 KWDVVAWRTLLNACHVH 504



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 211/422 (50%), Gaps = 28/422 (6%)

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHS-WAIRTGLALDVCVG--CSLVDMYAKC 331
           + S +LP    L  ++  C++++    GK +H+ + IR   +    +    SLV +Y KC
Sbjct: 4   VFSRYLPSLEELGKLLKLCADVKWLPFGKAMHAQFLIRNQTSNHSHISHLNSLVHLYVKC 63

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA-PNHFT 390
              G +  +R +FD M   NV+SW  ++ GY+  GG   E + LF +M+  Q A PN + 
Sbjct: 64  ---GQLGLARNLFDAMPLRNVVSWNVLMAGYLH-GGNHLEVLVLFKNMVSLQNACPNEYV 119

Query: 391 FASVLKACGNLLDSNVAEQVYTHAV--KRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           F + L AC +     V E +  H +  K G      V ++L+ MY+R   +E A +  ++
Sbjct: 120 FTTALSACSH--GGRVKEGMQCHGLLFKFGLVCHQYVKSALVHMYSRCSHVELALQVLDT 177

Query: 449 L---FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           +      ++ SYN++++A  ++   E+A E+L  + D  V     T+  ++   + I  +
Sbjct: 178 VPGEHVNDIFSYNSVLNALVESGRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDL 237

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             G ++HAR+++ G   +  + + LI MY +C  V  A  VF  +++RNV+ WT+++T +
Sbjct: 238 QLGLRVHARLLRGGLMFDEFVGSMLIDMYGKCGEVLNARNVFDGLQNRNVVVWTALMTAY 297

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSM---YDEHG 621
            ++G+   +L +F  M  +G  PN  T+  +L+AC+    +  G   H R     +  H 
Sbjct: 298 LQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNHV 357

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           IV+       ++++  +SGS+  +      M +  D++ W   +     HG   LGK A 
Sbjct: 358 IVRN-----ALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYSHHG---LGKQAL 408

Query: 682 EM 683
           ++
Sbjct: 409 QV 410



 Score =  126 bits (317), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 78/247 (31%), Positives = 135/247 (54%), Gaps = 5/247 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR ++A+  L  M  +    D  TY  ++  C + R+  LG  VH+ L R  L  +  + 
Sbjct: 200 GRGEEAVEVLRRMVDECVAWDHVTYVGVMGLCAQIRDLQLGLRVHARLLRGGLMFDEFVG 259

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           + LI +Y KCG++  A  +F  + N R++V W++++++Y+  G   +++++F  M   G 
Sbjct: 260 SMLIDMYGKCGEVLNARNVFDGLQN-RNVVVWTALMTAYLQNGYFEESLNLFTCMDREGT 318

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PNEY F+ ++ AC+    +  G +++  + K G F + V V  ALI+M+ K GS+D  S
Sbjct: 319 LPNEYTFAVLLNACAGIAALRHGDLLHARVEKLG-FKNHVIVRNALINMYSKSGSID--S 375

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           +Y VF  M  ++ + W  MI   +  G  + A+++F DM+ +   P+  T  GV+SA S 
Sbjct: 376 SYNVFTDMIYRDIITWNAMICGYSHHGLGKQALQVFQDMVSAEECPNYVTFIGVLSAYSH 435

Query: 296 LELFTSG 302
           L L   G
Sbjct: 436 LGLVKEG 442



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 100/206 (48%), Gaps = 1/206 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +G  ++++     M ++G  P+  T+++LL +C        G L+H+ + +   + +
Sbjct: 297 YLQNGYFEESLNLFTCMDREGTLPNEYTFAVLLNACAGIAALRHGDLLHARVEKLGFKNH 356

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ N+LI++YSK G ++ +  +F  M   RDI++W++MI  Y + G    A+ +F +M+
Sbjct: 357 VIVRNALINMYSKSGSIDSSYNVFTDM-IYRDIITWNAMICGYSHHGLGKQALQVFQDMV 415

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
               CPN   F  V+ A S+   V  G      L++    +  +     ++ +  +  + 
Sbjct: 416 SAEECPNYVTFIGVLSAYSHLGLVKEGFYYLNHLMRNFKIEPGLEHYTCMVALLSRAGLL 475

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRC 258
            E+   +     + + V W  ++  C
Sbjct: 476 DEAENFMKTTQVKWDVVAWRTLLNAC 501


>gi|357521591|ref|XP_003631084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525106|gb|AET05560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 980

 Score =  478 bits (1230), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 267/755 (35%), Positives = 429/755 (56%), Gaps = 37/755 (4%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +P+ +  N  IS + + G  + A  +F +M  +R  VS+++MIS Y+   K   A ++F 
Sbjct: 46  DPDILKWNKAISTHMRNGHCDSALHVFNTM-PRRSSVSYNAMISGYLRNSKFNLARNLFD 104

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
           +M      P    FS  +       N  +G     F L     + DV    +L+  + + 
Sbjct: 105 QM------PERDLFSWNVMLTGYVRNCRLGDARRLFDLMP---EKDVVSWNSLLSGYAQN 155

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G VD   A +VFD M EKN++ W  ++      G   +A  LF          +  +   
Sbjct: 156 GYVD--EAREVFDNMPEKNSISWNGLLAAYVHNGRIEEACLLF----------ESKSDWD 203

Query: 289 VVSACSELELFTSGKQLHS--WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ++S    +  F   K+L    W        D     +++  YA+    G +  +R++FD 
Sbjct: 204 LISWNCLMGGFVRKKKLGDARWLFDKMPVRDAISWNTMISGYAQ---GGGLSQARRLFDE 260

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
               +V +WTA+++GYVQ+G  D EA   F +M +     N  ++ +++         ++
Sbjct: 261 SPTRDVFTWTAMVSGYVQNGMLD-EAKTFFDEMPE----KNEVSYNAMIAGYVQTKKMDI 315

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           A +++     R    +    N++I+ Y + G +  ARK F+ + +++ VS+  ++  YA+
Sbjct: 316 ARELFESMPCR----NISSWNTMITGYGQIGDIAQARKFFDMMPQRDCVSWAAIIAGYAQ 371

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           + + E+A  +  EI+  G   +  TF   LS  + I A+  G+QIH + +K G+ +   +
Sbjct: 372 SGHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFV 431

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            NAL++MY +C +++ A   F+ +E+++V+SW +M+ G+A+HGF  +AL +F  M   G+
Sbjct: 432 GNALLAMYFKCGSIDEANDTFEGIEEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV 491

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+ IT + VLSACSH GL+  G ++F SM  ++G++   +HY CM+DLLGR+G L EA 
Sbjct: 492 KPDEITMVGVLSACSHTGLLDRGTEYFYSMTKDYGVIPTSKHYTCMIDLLGRAGRLEEAQ 551

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           + IR+MP       W   LGA R+HG+TELG+ AAEM+ + +PQ+   ++LLSNLYA++G
Sbjct: 552 DLIRNMPFQPGAASWGALLGASRIHGNTELGEKAAEMVFKMEPQNSGMYVLLSNLYAASG 611

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W     +R +M++  + K  G SW+E  NK+H F VG+ SHP+   IYA L++L LK++
Sbjct: 612 RWVDADKMRSKMRDIGVQKVPGYSWVEVQNKIHTFSVGDCSHPEKERIYAYLEELDLKMR 671

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+  T  VLH++EEE+K   L  HSEK+AVAFG+++    +PIRV KNLRVC DCH+
Sbjct: 672 EEGYVSLTKLVLHDVEEEEKEHMLKYHSEKLAVAFGILTIPGGRPIRVMKNLRVCEDCHS 731

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK+IS + GR I+LRDS+RFHH  +G CSC DYW
Sbjct: 732 AIKHISKIVGRLIILRDSHRFHHFNEGFCSCGDYW 766



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/261 (32%), Positives = 129/261 (49%), Gaps = 57/261 (21%)

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           + GL+  G ++F  M +E+ +    +HY CM+DLLGR   L E                 
Sbjct: 776 YTGLLDTGAEYFYPMNEEYSVTPTSKHYTCMIDLLGRVDRLEEG---------------- 819

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              LGA R+HG+TELG+ AA+M  +  PQ+                         +M++ 
Sbjct: 820 -ALLGASRIHGNTELGEKAAQMFFKMGPQNSGI---------------------SKMRDV 857

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + K  G SW E  NK+H F VG     +  E    L++L LK++E            E 
Sbjct: 858 GVQKVPGYSWFEVQNKIHTFSVG-LFLSRERENIGFLEELDLKMRE-----------REE 905

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN-LRVCGDCHTAIKYISMVTGREIV 840
           E+E+ ++YL   SE +A A G+++    +P RV K  + VC DC +AIK++S + GR I 
Sbjct: 906 EKERTLKYL---SENLAAALGILTIPVGRPNRVMKKRVYVCEDCRSAIKHMSKIVGRLIT 962

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           LRDS+RF+   +  CSC +YW
Sbjct: 963 LRDSHRFN---ESICSCGEYW 980



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 1/137 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     + Q G   +  T+   L +C       LGK +H    +        + 
Sbjct: 373 GHYEEALNMFVEIKQDGESLNRATFGCALSTCADIAALELGKQIHGQAVKMGYGTGCFVG 432

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+++Y KCG ++EAN  F+ +  ++D+VSW++M++ Y   G    A+ +F  M   G 
Sbjct: 433 NALLAMYFKCGSIDEANDTFEGI-EEKDVVSWNTMLAGYARHGFGRQALTVFESMKTAGV 491

Query: 177 CPNEYCFSAVIRACSNT 193
            P+E     V+ ACS+T
Sbjct: 492 KPDEITMVGVLSACSHT 508



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/319 (22%), Positives = 127/319 (39%), Gaps = 54/319 (16%)

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           +E V  +   R +  D    N  IS + R+G  + A   F ++  ++ VSYN M+  Y +
Sbjct: 33  SESVTNNNKPRVKDPDILKWNKAISTHMRNGHCDSALHVFNTMPRRSSVSYNAMISGYLR 92

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N      F L   + D                           Q+  R + S        
Sbjct: 93  N----SKFNLARNLFD---------------------------QMPERDLFS-------- 113

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +N +++ Y R   +  A ++F  M +++V+SW S+++G+A++G+   A E+F  M     
Sbjct: 114 WNVMLTGYVRNCRLGDARRLFDLMPEKDVVSWNSLLSGYAQNGYVDEAREVFDNM----P 169

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           + N I++  +L+A  H G I E    F S  D   I      + C++    R   L +A 
Sbjct: 170 EKNSISWNGLLAAYVHNGRIEEACLLFESKSDWDLI-----SWNCLMGGFVRKKKLGDAR 224

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASA 705
                MP+  D + W T +      G    G   A  + ++ P +D      + + Y   
Sbjct: 225 WLFDKMPVR-DAISWNTMISGYAQGG----GLSQARRLFDESPTRDVFTWTAMVSGYVQN 279

Query: 706 GHWEYVANIRKRMKERNLI 724
           G  +        M E+N +
Sbjct: 280 GMLDEAKTFFDEMPEKNEV 298


>gi|242045096|ref|XP_002460419.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
 gi|241923796|gb|EER96940.1| hypothetical protein SORBIDRAFT_02g027830 [Sorghum bicolor]
          Length = 635

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 371/591 (62%), Gaps = 6/591 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD++L+G L P       +++AC++ +     + +HS   R+ LA D  +  SL+ MY K
Sbjct: 50  LDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCK 109

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G+V D+R VFD +   +V+SWT +ITGY Q+     EA+ L  DM++ +  P+ FT
Sbjct: 110 C---GAVSDARHVFDGIPTRDVVSWTYLITGYAQND-MPAEALGLLPDMLRARFRPSGFT 165

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F S LKA G      + EQ++  AVK     D  VG++L+ MYAR  +M+ A + F+ L 
Sbjct: 166 FTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQQMDMAIRVFDWLD 225

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            KN VS+N ++  +A+  + E       E++  G G + +T++S+ S  + IGA+ +G  
Sbjct: 226 SKNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRW 285

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA +IKSG +    + N ++ MY++  ++  A +VF  ++ R++++W +M+T FA++G 
Sbjct: 286 VHAHMIKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGL 345

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+  F ++   GI+ N IT+++VL+ACSH GL+ EG ++F  M D + +   ++HY 
Sbjct: 346 GKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKD-YNVEPEIDHYV 404

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
             VDLLGR+G L EAL F+  MP+     VW   LGACR+H + ++G++AA+ + E DP+
Sbjct: 405 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKIGQYAADHVFELDPE 464

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D    +LL N+YAS G W+  A +RK MK   + KE  CSW+E +N VH F   +++HPK
Sbjct: 465 DTGPPVLLYNIYASTGQWDDAARVRKMMKATGVKKEPACSWVEIENSVHMFVADDSTHPK 524

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + EIY   +++  +IK+ GY+P+T++VL  ++E+++   L  HSEKIA+AF LI+     
Sbjct: 525 SEEIYRMWEEVNTRIKKAGYVPNTDYVLLHIKEQERETKLQYHSEKIALAFALINMPAGA 584

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IR+ KN+R+CGDCH+A +Y+S V  REIV+RD+NRFHH  +G CSC DYW
Sbjct: 585 TIRIMKNIRICGDCHSAFRYVSEVFKREIVVRDTNRFHHFSNGSCSCGDYW 635



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/333 (32%), Positives = 178/333 (53%), Gaps = 7/333 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           LDL+      P    Y  ++ +C +S+N    + +HS L+RS+L  +  +LNSLI +Y K
Sbjct: 50  LDLLLTGELAPTPRVYHSIITACAQSKNLAGARAIHSHLSRSRLAGDGFLLNSLIHMYCK 109

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG +++A  +F  +   RD+VSW+ +I+ Y       +A+ +  +ML   F P+ + F++
Sbjct: 110 CGAVSDARHVFDGIPT-RDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTS 168

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
            ++A        IG  ++   +K    D DV VG AL+DM+ +    ++ A +VFD +  
Sbjct: 169 FLKAAGACGGRGIGEQMHALAVKYN-LDEDVYVGSALLDMYARCQ-QMDMAIRVFDWLDS 226

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN V W  +I    + G     +  F +M  +GF    FT S V SA + +     G+ +
Sbjct: 227 KNEVSWNALIAGFARKGDGETTLMKFAEMQRNGFGATHFTYSSVFSALARIGALEQGRWV 286

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  I++G  L   V  +++ MYAK    GS+ D+RKVFDR+   ++++W  ++T + Q 
Sbjct: 287 HAHMIKSGQKLTAFVANTILGMYAK---SGSMVDARKVFDRVDQRDLVTWNTMLTAFAQY 343

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            G  KEAV  F ++ +  +  N  TF SVL AC
Sbjct: 344 -GLGKEAVAHFEEIRKYGIQLNQITFLSVLTAC 375



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 199/395 (50%), Gaps = 9/395 (2%)

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P    + ++I AC+ ++N+A    I+  L +      D  +  +LI M+ K G+V   
Sbjct: 58  LAPTPRVYHSIITACAQSKNLAGARAIHSHLSRS-RLAGDGFLLNSLIHMYCKCGAV--S 114

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  VFD +  ++ V WT +IT   Q   P +A+ L  DM+ + F P  FT +  + A  
Sbjct: 115 DARHVFDGIPTRDVVSWTYLITGYAQNDMPAEALGLLPDMLRARFRPSGFTFTSFLKAAG 174

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                  G+Q+H+ A++  L  DV VG +L+DMYA+C     +D + +VFD +   N +S
Sbjct: 175 ACGGRGIGEQMHALAVKYNLDEDVYVGSALLDMYARCQ---QMDMAIRVFDWLDSKNEVS 231

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A+I G+ + G  +   +K F++M +      HFT++SV  A   +        V+ H 
Sbjct: 232 WNALIAGFARKGDGETTLMK-FAEMQRNGFGATHFTYSSVFSALARIGALEQGRWVHAHM 290

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K G+ L   V N+++ MYA+SG M DARK F+ + +++LV++NTM+ A+A+    ++A 
Sbjct: 291 IKSGQKLTAFVANTILGMYAKSGSMVDARKVFDRVDQRDLVTWNTMLTAFAQYGLGKEAV 350

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               EI   G+  +  TF S+L+  S  G + +G+Q    +     E     Y + + + 
Sbjct: 351 AHFEEIRKYGIQLNQITFLSVLTACSHGGLVKEGKQYFDMMKDYNVEPEIDHYVSFVDLL 410

Query: 535 SRCANV-EAAFQVFKEMEDRNVISWTSMITGFAKH 568
            R   + EA   VFK   +     W +++     H
Sbjct: 411 GRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 445



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 60/244 (24%), Positives = 122/244 (50%), Gaps = 3/244 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+  L  M +    P   T++  LK+        +G+ +H+L  +  L+ +  + ++L+
Sbjct: 146 EALGLLPDMLRARFRPSGFTFTSFLKAAGACGGRGIGEQMHALAVKYNLDEDVYVGSALL 205

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y++C  ++ A ++F  + +K + VSW+++I+ +  +G     +  F EM   GF    
Sbjct: 206 DMYARCQQMDMAIRVFDWLDSKNE-VSWNALIAGFARKGDGETTLMKFAEMQRNGFGATH 264

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + +S+V  A +    +  G  ++  ++K G       V   ++ M+ K S  +  A KVF
Sbjct: 265 FTYSSVFSALARIGALEQGRWVHAHMIKSGQ-KLTAFVANTILGMYAK-SGSMVDARKVF 322

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D++ +++ V W  M+T   Q G  ++A+  F ++   G   ++ T   V++ACS   L  
Sbjct: 323 DRVDQRDLVTWNTMLTAFAQYGLGKEAVAHFEEIRKYGIQLNQITFLSVLTACSHGGLVK 382

Query: 301 SGKQ 304
            GKQ
Sbjct: 383 EGKQ 386


>gi|297738034|emb|CBI27235.3| unnamed protein product [Vitis vinifera]
          Length = 696

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/643 (38%), Positives = 388/643 (60%), Gaps = 28/643 (4%)

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++T  W   +   T+    R+AI  +++M +SG  PD F    V+ A S L+   +G+Q+
Sbjct: 55  RSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQI 114

Query: 306 HSWAIRTGL-ALDVCVGCSLVDMYAKC-----------------TVDGSVDDSRKVFDRM 347
           H+ A++ G  +  V V  +LV+MY KC                    G VDDS+ +F+  
Sbjct: 115 HAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESF 174

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
           +D +++SW  +I+ + QS  R  EA+  F  M+   V  +  T ASVL AC +L   +V 
Sbjct: 175 VDRDMVSWNTMISSFSQSD-RFSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVG 233

Query: 408 EQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           ++++ + ++    +++  VG++L+ MY    ++E  R+ F+ +  + +  +N M+  YA+
Sbjct: 234 KEIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYAR 293

Query: 467 NLNSEKAFELLHE-IEDTGVGTSAYTFASLLSG-ASSIGAIGKGEQIHARIIKSGFESNH 524
           N   EKA  L  E I+  G+  +  T AS++     S+ AI KG++IHA  I++   S+ 
Sbjct: 294 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDI 353

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + +AL+ MY++C  +  + +VF EM ++NVI+W  +I     HG    ALE+F  M+A+
Sbjct: 354 TVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMVAE 413

Query: 585 G-----IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
                  KPN +T+I V +ACSH+GLISEG   F  M  +HG+    +HYAC+VDLLGR+
Sbjct: 414 AGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACVVDLLGRA 473

Query: 640 GSLTEALEFIRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           G L EA E + +MP   D V  W + LGACR+H + ELG+ AA+ +L  +P   + ++LL
Sbjct: 474 GQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELGEVAAKNLLHLEPNVASHYVLL 533

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SN+Y+SAG W     +RK M++  + KE GCSWIE  ++VHKF  G+ SHP++ +++  L
Sbjct: 534 SNIYSSAGLWNKAMEVRKNMRQMGVKKEPGCSWIEFRDEVHKFMAGDVSHPQSEQLHGFL 593

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
           + L+ K+++ GY+PDT+ VLH ++E++K   L  HSEK+A+AFG+++T     IRV KNL
Sbjct: 594 ETLSEKMRKEGYVPDTSCVLHNVDEDEKENLLCGHSEKLAIAFGILNTPPGTTIRVAKNL 653

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RVC DCH A K+IS +  REI++RD  RFHH K+G CSC DYW
Sbjct: 654 RVCNDCHAATKFISKIMEREIIVRDVRRFHHFKEGTCSCGDYW 696



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 140/472 (29%), Positives = 241/472 (51%), Gaps = 48/472 (10%)

Query: 5   SLPAPAKIPPPSSFKPS-NPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAI 63
           S P+    PPPS  KP+ +P     PP  + P  +  +  + L +R     ND R  +AI
Sbjct: 22  SPPSLQTQPPPSIQKPTASPLTSKTPPKPTSPSRSTASWVDALRSRT--RSNDFR--EAI 77

Query: 64  FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNSLISL 122
            T   MT  G  PD   +  +LK+    ++   G+ +H+   +     +SV + N+L+++
Sbjct: 78  STYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAAVKFGYGSSSVTVANTLVNM 137

Query: 123 YSKCGDL--------------------NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           Y KCG +                    +++  +F+S  + RD+VSW++MISS+    +  
Sbjct: 138 YGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVD-RDMVSWNTMISSFSQSDRFS 196

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           +A+  F  M+  G   +    ++V+ ACS+ E + +G  I+ ++L+      +  VG AL
Sbjct: 197 EALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSAL 256

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLP 281
           +DM+      +ES  +VFD +  +    W  MI+   + G    A+ LF++MI ++G LP
Sbjct: 257 VDMYCNCR-QVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLP 315

Query: 282 DRFTLSGVVSAC-SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           +  T++ V+ AC   L     GK++H++AIR  LA D+ VG +LVDMYAKC   G ++ S
Sbjct: 316 NTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDITVGSALVDMYAKC---GCLNLS 372

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-----GQVAPNHFTFASVL 395
           R+VF+ M + NV++W  +I       G+ +EA++LF +M+      G+  PN  TF +V 
Sbjct: 373 RRVFNEMPNKNVITWNVLIMA-CGMHGKGEEALELFKNMVAEAGRGGEAKPNEVTFITVF 431

Query: 396 KACGN--LLDSNVA---EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            AC +  L+   +       + H V+       CV    + +  R+G++E+A
Sbjct: 432 AACSHSGLISEGLNLFYRMKHDHGVEPTSDHYACV----VDLLGRAGQLEEA 479



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/513 (28%), Positives = 250/513 (48%), Gaps = 41/513 (7%)

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
           K     R   SW   + S        +AI  ++EM   G  P+ + F AV++A S  +++
Sbjct: 49  KPTSPSRSTASWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDL 108

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK---------------------GSVDLES 235
             G  I+   +K GY  S V V   L++M+ K                     G VD   
Sbjct: 109 KTGEQIHAAAVKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSK 168

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +F+   +++ V W  MI+  +Q     +A+  F  M+L G   D  T++ V+ ACS 
Sbjct: 169 A--LFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMVLEGVELDGVTIASVLPACSH 226

Query: 296 LELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           LE    GK++H++ +R   L  +  VG +LVDMY  C     V+  R+VFD +L   +  
Sbjct: 227 LERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCR---QVESGRRVFDHILGRRIEL 283

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNV-AEQVYT 412
           W A+I+GY ++ G D++A+ LF +MI+   + PN  T ASV+ AC + L +    ++++ 
Sbjct: 284 WNAMISGYARN-GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHA 342

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +A++   A D  VG++L+ MYA+ G +  +R+ F  +  KN++++N ++ A   +   E+
Sbjct: 343 YAIRNMLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEE 402

Query: 473 AFELLHE-IEDTGVGTSA----YTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCI 526
           A EL    + + G G  A     TF ++ +  S  G I +G  +  R+    G E     
Sbjct: 403 ALELFKNMVAEAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDH 462

Query: 527 YNALISMYSRCANVEAAFQVFKEM--EDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
           Y  ++ +  R   +E A+++   M  E   V +W+S++     H       E+  K L  
Sbjct: 463 YACVVDLLGRAGQLEEAYELVNTMPAEFDKVGAWSSLLGACRIHQNVELG-EVAAKNLLH 521

Query: 585 GIKPNGITYIAVLSAC-SHAGLISEGWKHFRSM 616
            ++PN  ++  +LS   S AGL ++  +  ++M
Sbjct: 522 -LEPNVASHYVLLSNIYSSAGLWNKAMEVRKNM 553



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 57/213 (26%), Positives = 111/213 (52%), Gaps = 13/213 (6%)

Query: 56  DGRVQKA-IFTLDLMTQKGNHPDLDTYSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNS 113
           +G  +KA I  ++++   G  P+  T + ++ +C+ S      GK +H+   R+ L  + 
Sbjct: 294 NGLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRNMLASDI 353

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML- 172
            + ++L+ +Y+KCG LN + ++F  M NK ++++W+ +I +    GK  +A+ +F  M+ 
Sbjct: 354 TVGSALVDMYAKCGCLNLSRRVFNEMPNK-NVITWNVLIMACGMHGKGEEALELFKNMVA 412

Query: 173 ELGFC----PNEYCFSAVIRACSNTENVAIG-HIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           E G      PNE  F  V  ACS++  ++ G ++ Y      G   +     C ++D+  
Sbjct: 413 EAGRGGEAKPNEVTFITVFAACSHSGLISEGLNLFYRMKHDHGVEPTSDHYAC-VVDLLG 471

Query: 228 KGSVDLESAYKVFDKM-TEKNTVG-WTLMITRC 258
           +    LE AY++ + M  E + VG W+ ++  C
Sbjct: 472 RAG-QLEEAYELVNTMPAEFDKVGAWSSLLGAC 503


>gi|297739749|emb|CBI29931.3| unnamed protein product [Vitis vinifera]
          Length = 838

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 271/846 (32%), Positives = 468/846 (55%), Gaps = 61/846 (7%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G   ++ TY  L + C  S +    K +H+ + +S  +   V+ + LI +Y   G+
Sbjct: 1   MEERGIRANVQTYLWLFEGCFNSGSLLDAKKLHARIFKSGFDGEDVLGSRLIDIYLAHGE 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           ++ A K+F  + +  ++  W+ +IS  + +      + +F  M+     P+E  F++V+R
Sbjct: 61  VDNAIKLFDDIPSS-NVSFWNKVISGLLAKKLASQVLGLFSLMITENVTPDESTFASVLR 119

Query: 189 ACSNTEN-VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEK 246
           ACS  +    +   I+  ++  G F S   V   LID++ K G VDL  A  VF+++  K
Sbjct: 120 ACSGGKAPFQVTEQIHAKIIHHG-FGSSPLVCNPLIDLYSKNGHVDL--AKLVFERLFLK 176

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           ++V W  MI+  +Q G   +AI LF  M  S  +P  +  S V+SAC+++ELF  G+QLH
Sbjct: 177 DSVSWVAMISGLSQNGREDEAILLFCQMHKSAVIPTPYVFSSVLSACTKIELFKLGEQLH 236

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            + ++ GL+ +  V  +LV +Y++    G++  + ++F +M   + +S+ ++I+G  Q G
Sbjct: 237 GFIVKWGLSSETFVCNALVTLYSRW---GNLIAAEQIFSKMHRRDRISYNSLISGLAQRG 293

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
             D+ A++LF  M    + P+  T AS+L AC ++      +Q++++ +K G + D  + 
Sbjct: 294 FSDR-ALQLFEKMQLDCMKPDCVTVASLLSACASVGAGYKGKQLHSYVIKMGMSSDLIIE 352

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
            SL+ +Y +   +E A + F +   +N+V +N M+ AY +  N  +++ +  +++  G+ 
Sbjct: 353 GSLLDLYVKCFDIETAHEYFLTTETENVVLWNVMLVAYGQLGNLSESYWIFLQMQIEGLM 412

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + YT+ S+L   +S+GA+  GEQIH ++IKSGF+ N  + + LI MY++   ++ A  +
Sbjct: 413 PNQYTYPSILRTCTSLGALDLGEQIHTQVIKSGFQFNVYVCSVLIDMYAKHGELDTARGI 472

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            + + + +V+SWT+MI G+ +H   A AL++F +M   GI+ + I + + +SAC+    +
Sbjct: 473 LQRLREEDVVSWTAMIAGYTQHDLFAEALKLFQEMENQGIRSDNIGFSSAISACAGIQAL 532

Query: 607 SEGWK----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA----------------- 645
           ++G +     + S Y E   +        ++ L  + GS+ +A                 
Sbjct: 533 NQGQQIHAQSYISGYSEDLSIGNALASNVLITLYSKCGSIEDAKREFFEMPEKNVVSWNA 592

Query: 646 ------------------------------LEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
                                         + F+  MP+  D ++WRT L AC VH + E
Sbjct: 593 MITGYSQHGYGSEAVSLFEEMKQLGLMPNHVTFVGEMPIEPDAMIWRTLLSACTVHKNIE 652

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           +G+ AA  +LE +P+D A ++LLSN+YA +G W+Y    R+ MK+R + KE G SWIE  
Sbjct: 653 IGEFAARHLLELEPEDSATYVLLSNMYAVSGKWDYRDRTRQMMKDRGVKKEPGRSWIEVK 712

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           N +H F VG+  HP   +IY  +D L  +  E GY+ D   +L+++E+EQK    + HSE
Sbjct: 713 NSIHAFFVGDRLHPLAEQIYEYIDDLNERAGEIGYVQDRYNLLNDVEQEQKDPTAYIHSE 772

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           K+AVAFGL+S + + PIRV KNLRVC DCH  IK++S ++ R IV+RD+ RFHH + G C
Sbjct: 773 KLAVAFGLLSLTNTMPIRVIKNLRVCNDCHNWIKFVSKISNRAIVVRDAYRFHHFEGGVC 832

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 833 SCKDYW 838


>gi|356567156|ref|XP_003551787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 250/736 (33%), Positives = 430/736 (58%), Gaps = 13/736 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L++G  +K+I     M       D  T++++LK+C    ++ LG  VH L  +   E +
Sbjct: 113 YLHNGVNRKSIEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFEND 172

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V  ++L+ +YSKC  L++A ++F+ M  +R++V WS++I+ YV   + ++ + +F +ML
Sbjct: 173 VVTGSALVDMYSKCKKLDDAFRVFREM-PERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           ++G   ++  +++V R+C+      +G  ++G  LK   F  D  +G A +DM+ K    
Sbjct: 232 KVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSD-FAYDSIIGTATLDMYAKCE-R 289

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A+KVF+ +       +  +I    +      A+ +F  +  +    D  +LSG ++A
Sbjct: 290 MFDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTA 349

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS ++    G QLH  A++ GL  ++CV  +++DMY KC   G++ ++  +F+ M   + 
Sbjct: 350 CSVIKRHLEGIQLHGLAVKCGLGFNICVANTILDMYGKC---GALMEACLIFEEMERRDA 406

Query: 353 MSWTAIITGYVQSGGRDKEAVK---LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           +SW AII  + Q    ++E VK   LF  M++  + P+ FT+ SV+KAC      N   +
Sbjct: 407 VSWNAIIAAHEQ----NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTE 462

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   +K G  LD  VG++L+ MY + G + +A K    L EK  VS+N+++  ++    
Sbjct: 463 IHGRIIKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQ 522

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           SE A     ++ + G+    YT+A++L   +++  I  G+QIHA+I+K    S+  I + 
Sbjct: 523 SENAQRYFSQMLEMGIIPDNYTYATVLDVCANMATIELGKQIHAQILKLQLHSDVYIAST 582

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L+ MYS+C N++ +  +F++   R+ ++W++MI  +A HG   +A+ +F +M    +KPN
Sbjct: 583 LVDMYSKCGNMQDSRLMFEKAPKRDYVTWSAMICAYAYHGLGEKAINLFEEMQLLNVKPN 642

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
              +I+VL AC+H G + +G  +F+ M   +G+  +MEHY+CMVDLLGRSG + EAL+ I
Sbjct: 643 HTIFISVLRACAHMGYVDKGLHYFQKMLSHYGLDPQMEHYSCMVDLLGRSGQVNEALKLI 702

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            SMP  AD ++WRT L  C++ G+ E+ + A   +L+ DPQD +A++LL+N+YA  G W 
Sbjct: 703 ESMPFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYAIVGMWG 762

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VA +R  MK   L KE GCSWIE  ++VH F VG+ +HP++ EIY +   L  ++K  G
Sbjct: 763 EVAKMRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAG 822

Query: 770 YLPDTNFVLHELEEEQ 785
           Y+PD +F+L E  EEQ
Sbjct: 823 YVPDIDFMLDEEMEEQ 838



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 185/665 (27%), Positives = 326/665 (49%), Gaps = 46/665 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S +L+ C   +  + GK VH+ +  +   P   + N L+  Y K   +N A K+F  M
Sbjct: 8   TFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKVFDRM 67

Query: 140 ------------------GN------------KRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                             GN            +RD+VSW+S++S Y++ G    +I +FV
Sbjct: 68  PQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 170 EMLELGFCPNEYC-FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            M  L   P++Y  F+ +++ACS  E+  +G  ++   ++ G F++DV  G AL+DM+ K
Sbjct: 128 RMRSLKI-PHDYATFAVILKACSGIEDYGLGLQVHCLAIQMG-FENDVVTGSALVDMYSK 185

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
               L+ A++VF +M E+N V W+ +I    Q     + ++LF DM+  G    + T + 
Sbjct: 186 CK-KLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V  +C+ L  F  G QLH  A+++  A D  +G + +DMYAKC     + D+ KVF+ + 
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCE---RMFDAWKVFNTLP 301

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           +    S+ AII GY +   +  +A+ +F  + +  +  +  + +  L AC  +       
Sbjct: 302 NPPRQSYNAIIVGYARQ-DQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGI 360

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++  AVK G   + CV N+++ MY + G + +A   FE +  ++ VS+N ++ A+ +N 
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEMERRDAVSWNAIIAAHEQNE 420

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              K   L   +  + +    +T+ S++   +   A+  G +IH RIIKSG   +  + +
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGTEIHGRIIKSGMGLDWFVGS 480

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ MY +C  +  A ++   +E++  +SW S+I+GF+    +  A   F +ML  GI P
Sbjct: 481 ALVDMYGKCGMLMEAEKIHARLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGIIP 540

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           +  TY  VL  C++   I  G K   +   +  +   +   + +VD+  + G++ ++   
Sbjct: 541 DNYTYATVLDVCANMATIELG-KQIHAQILKLQLHSDVYIASTLVDMYSKCGNMQDSRLM 599

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD--PAAHILLSNLYASAG 706
               P   D + W   + A   HG   LG+ A  +  E    +  P   I +S L A A 
Sbjct: 600 FEKAP-KRDYVTWSAMICAYAYHG---LGEKAINLFEEMQLLNVKPNHTIFISVLRACA- 654

Query: 707 HWEYV 711
           H  YV
Sbjct: 655 HMGYV 659



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 199/415 (47%), Gaps = 35/415 (8%)

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
           + T S ++  CS L+    GKQ+H+  I TG    + V   L+  Y K +    ++ + K
Sbjct: 6   KLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSS---KMNYAFK 62

Query: 343 VFDRMLDHNVMSWTAIITGYVQSG------------------------------GRDKEA 372
           VFDRM   +V+SW  +I GY   G                              G ++++
Sbjct: 63  VFDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKS 122

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +++F  M   ++  ++ TFA +LKAC  + D  +  QV+  A++ G   D   G++L+ M
Sbjct: 123 IEIFVRMRSLKIPHDYATFAVILKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++  +++DA + F  + E+NLV ++ ++  Y +N    +  +L  ++   G+G S  T+
Sbjct: 183 YSKCKKLDDAFRVFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTY 242

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           AS+    + + A   G Q+H   +KS F  +  I  A + MY++C  +  A++VF  + +
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCERMFDAWKVFNTLPN 302

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
               S+ ++I G+A+     +AL+IF  +  + +  + I+    L+ACS      EG + 
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALDIFQSLQRNNLGFDEISLSGALTACSVIKRHLEGIQ- 361

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
              +  + G+   +     ++D+ G+ G+L EA      M    D + W   + A
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALMEACLIFEEME-RRDAVSWNAIIAA 415



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 93/213 (43%), Gaps = 35/213 (16%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T   TF+ +L   S++ A+  G+Q+H ++I +GF     + N L+  Y + + +  AF+V
Sbjct: 4   TKKLTFSHILQKCSNLKALNPGKQVHTQMIVTGFVPTIYVANCLLQFYCKSSKMNYAFKV 63

Query: 547 FKEMEDRNVISWTSMITGFA---KHGFAA----------------------------RAL 575
           F  M  R+VISW ++I G+A     GFA                             +++
Sbjct: 64  FDRMPQRDVISWNTLIFGYAGIGNMGFAQSLFDSMPERDVVSWNSLLSCYLHNGVNRKSI 123

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVD 634
           EIF +M +  I  +  T+  +L ACS  G+   G       +  + G    +   + +VD
Sbjct: 124 EIFVRMRSLKIPHDYATFAVILKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +  +   L +A    R MP   +++ W   +  
Sbjct: 182 MYSKCKKLDDAFRVFREMP-ERNLVCWSAVIAG 213


>gi|302800114|ref|XP_002981815.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
 gi|300150647|gb|EFJ17297.1| hypothetical protein SELMODRAFT_114918 [Selaginella moellendorffii]
          Length = 637

 Score =  478 bits (1229), Expect = e-132,   Method: Compositional matrix adjust.
 Identities = 248/635 (39%), Positives = 381/635 (60%), Gaps = 12/635 (1%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR---LFLDMILSGFLPDRFTLSG 288
           ++ +  K FD+M   + V W  +I     +G  RD  R    F  M+L G  P    +S 
Sbjct: 10  NIPAVRKAFDEMPVADIVSWNALIA--AYIG-NRDFDRCWLFFRGMLLQGINPGEVGISI 66

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
            +SAC++    T G+ +    + TG+  +  V  +LV MY K    G   D+  VF RM 
Sbjct: 67  FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKL---GHCTDAASVFLRMS 123

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +V++W+A++  Y ++G   +EA+ LF  M    VAPN  T  S L AC +L D     
Sbjct: 124 HRDVVAWSAMVAAYARNG-HPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGA 182

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            ++     +G      VG +L+++Y + GR+E A +AF  + EKN+V+++ +  AYA+N 
Sbjct: 183 LMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARND 242

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR--IIKSGFESNHCI 526
            +  A  +LH ++  G+  ++ TF S+L   ++I A+ +G +IH R  ++  G ES+  +
Sbjct: 243 RNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYV 302

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             AL++MYS+C N+  A  +F ++   +++ W S+I   A+HG   +ALE+F +M  +G+
Sbjct: 303 LTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGL 362

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P  IT+ +VL ACSHAG++ +G KHF S   +HGI    EH+ CMVDLLGR+G + ++ 
Sbjct: 363 QPTIITFTSVLFACSHAGMLDQGRKHFVSFIGDHGIFPEAEHFGCMVDLLGRAGWIVDSE 422

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           + +  MP     + W  FLGACR + + +    AAE + + DP+  A ++LLSN+YA AG
Sbjct: 423 DLLLHMPFEPHPVAWMAFLGACRTYRNMDRAIWAAENLFQLDPRKRAPYVLLSNMYAKAG 482

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W  VA +R+ M+    +KEAG SWIE  ++VH+F  G+  HP+  EI+AEL +L   +K
Sbjct: 483 RWSDVARMRQAMQLFMTVKEAGRSWIEVKDRVHEFISGDLDHPRIGEIHAELQRLTKLMK 542

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+PDT  VLH++++E K   +  HSEK+A+AF L++T +  PIRV KNLRVC DCHT
Sbjct: 543 EAGYVPDTEMVLHDVKQEVKEIMVGYHSEKLAMAFALLTTPEGSPIRVVKNLRVCNDCHT 602

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A K+IS +  REIV+RD NRFH  ++G CSC DYW
Sbjct: 603 ASKFISKLVNREIVVRDCNRFHRFQNGACSCGDYW 637



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 203/395 (51%), Gaps = 11/395 (2%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE-MLELGFC 177
           ++S YS+ G++    K F  M    DIVSW+++I++Y+   +  D   +F   ML  G  
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEM-PVADIVSWNALIAAYIG-NRDFDRCWLFFRGMLLQGIN 58

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P E   S  + AC++   + IG  I   +L  G  + +  V  AL+ M+ K       A 
Sbjct: 59  PGEVGISIFLSACTDAREITIGRSIQLAILGTG-IEEESIVQTALVSMYGKLG-HCTDAA 116

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
            VF +M+ ++ V W+ M+    + G PR+A+ LF  M L G  P++ TL   + AC+ L 
Sbjct: 117 SVFLRMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLG 176

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SG  +H      G+   V VG +LV++Y KC   G ++ + + F ++++ NV++W+A
Sbjct: 177 DLRSGALMHQRVEAQGIQSGVVVGTALVNLYGKC---GRIEAAVEAFGQIVEKNVVAWSA 233

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY--THAV 415
           I   Y ++  R+++A+++   M    + PN  TF SVL AC  +       +++  T  +
Sbjct: 234 ISAAYARN-DRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVL 292

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
             G   D  V  +L++MY++ G +  A   F+ +   +LV +N+++   A++  +EKA E
Sbjct: 293 GGGLESDVYVLTALVNMYSKCGNLALAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALE 352

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           L   +   G+  +  TF S+L   S  G + +G +
Sbjct: 353 LFERMRLEGLQPTIITFTSVLFACSHAGMLDQGRK 387



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 88/343 (25%), Positives = 175/343 (51%), Gaps = 5/343 (1%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL-FSDMIQGQVAPNHFTFAS 393
           G++   RK FD M   +++SW A+I  Y+  G RD +   L F  M+   + P     + 
Sbjct: 9   GNIPAVRKAFDEMPVADIVSWNALIAAYI--GNRDFDRCWLFFRGMLLQGINPGEVGISI 66

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            L AC +  +  +   +    +  G   +  V  +L+SMY + G   DA   F  +  ++
Sbjct: 67  FLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFLRMSHRD 126

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +V+++ MV AYA+N +  +A  L  +++  GV  +  T  S L   +S+G +  G  +H 
Sbjct: 127 VVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQ 186

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
           R+   G +S   +  AL+++Y +C  +EAA + F ++ ++NV++W+++   +A++     
Sbjct: 187 RVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQIVEKNVVAWSAISAAYARNDRNRD 246

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACM 632
           A+ + ++M  +G+ PN  T+++VL AC+    + +G + H R+     G+   +     +
Sbjct: 247 AIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTAL 306

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           V++  + G+L  A +    +    D+++W + +     HG TE
Sbjct: 307 VNMYSKCGNLALAGDMFDKIA-HLDLVLWNSLIATNAQHGQTE 348



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/332 (29%), Positives = 178/332 (53%), Gaps = 9/332 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G +P     S+ L +C  +R   +G+ +   +  + +E  S++  +L+S+Y K G 
Sbjct: 52  MLLQGINPGEVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGH 111

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
             +A  +F  M + RD+V+WS+M+++Y   G   +A+ +F +M   G  PN+    + + 
Sbjct: 112 CTDAASVFLRMSH-RDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLD 170

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC++  ++  G +++  +   G   S V VG AL++++ K    +E+A + F ++ EKN 
Sbjct: 171 ACASLGDLRSGALMHQRVEAQG-IQSGVVVGTALVNLYGKCG-RIEAAVEAFGQIVEKNV 228

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH-- 306
           V W+ +     +    RDAIR+   M L G +P+  T   V+ AC+ +     G+++H  
Sbjct: 229 VAWSAISAAYARNDRNRDAIRVLHRMDLEGLVPNSTTFVSVLDACAAIAALKQGRRIHER 288

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           +  +  GL  DV V  +LV+MY+KC   G++  +  +FD++   +++ W ++I    Q G
Sbjct: 289 TQVLGGGLESDVYVLTALVNMYSKC---GNLALAGDMFDKIAHLDLVLWNSLIATNAQHG 345

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             +K A++LF  M    + P   TF SVL AC
Sbjct: 346 QTEK-ALELFERMRLEGLQPTIITFTSVLFAC 376



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 61/233 (26%), Positives = 115/233 (49%), Gaps = 2/233 (0%)

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           ++S Y++ G +   RKAF+ +   ++VS+N ++ AY  N + ++ +     +   G+   
Sbjct: 1   MLSAYSQIGNIPAVRKAFDEMPVADIVSWNALIAAYIGNRDFDRCWLFFRGMLLQGINPG 60

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
               +  LS  +    I  G  I   I+ +G E    +  AL+SMY +  +   A  VF 
Sbjct: 61  EVGISIFLSACTDAREITIGRSIQLAILGTGIEEESIVQTALVSMYGKLGHCTDAASVFL 120

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
            M  R+V++W++M+  +A++G    AL +F +M  DG+ PN +T ++ L AC+  G +  
Sbjct: 121 RMSHRDVVAWSAMVAAYARNGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRS 180

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           G        +  GI   +     +V+L G+ G +  A+E    + +  +V+ W
Sbjct: 181 G-ALMHQRVEAQGIQSGVVVGTALVNLYGKCGRIEAAVEAFGQI-VEKNVVAW 231



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 3/250 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+     M   G  P+  T    L +C    +   G L+H  +    ++   V+
Sbjct: 140 NGHPREALGLFRQMDLDGVAPNKVTLVSGLDACASLGDLRSGALMHQRVEAQGIQSGVVV 199

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +L++LY KCG +  A + F  +  K ++V+WS++ ++Y    +  DAI +   M   G
Sbjct: 200 GTALVNLYGKCGRIEAAVEAFGQIVEK-NVVAWSAISAAYARNDRNRDAIRVLHRMDLEG 258

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFL-LKCGYFDSDVCVGCALIDMFVKGSVDLE 234
             PN   F +V+ AC+    +  G  I+    +  G  +SDV V  AL++M+ K   +L 
Sbjct: 259 LVPNSTTFVSVLDACAAIAALKQGRRIHERTQVLGGGLESDVYVLTALVNMYSKCG-NLA 317

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +FDK+   + V W  +I    Q G    A+ LF  M L G  P   T + V+ ACS
Sbjct: 318 LAGDMFDKIAHLDLVLWNSLIATNAQHGQTEKALELFERMRLEGLQPTIITFTSVLFACS 377

Query: 295 ELELFTSGKQ 304
              +   G++
Sbjct: 378 HAGMLDQGRK 387


>gi|297834380|ref|XP_002885072.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297330912|gb|EFH61331.1| hypothetical protein ARALYDRAFT_318289 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1134

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 253/649 (38%), Positives = 388/649 (59%), Gaps = 17/649 (2%)

Query: 222  LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
            LIDM+ K    L  AYKVFD M E+N V WT +++     G    ++ LF +M   G  P
Sbjct: 410  LIDMYCKCREQL-IAYKVFDSMPERNVVSWTALMSGHVLNGDLNGSLSLFTEMGRQGIYP 468

Query: 282  DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
            + FT S  + AC  L     G Q+H + ++ G  + V VG SLVDMY+KC   G ++++ 
Sbjct: 469  NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC---GRINEAE 525

Query: 342  KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA--PNHFTFASVLKACG 399
            KVF  M+  +++SW A+I GYV +G     A+  F  M + ++   P+ FT  S+LKAC 
Sbjct: 526  KVFRWMVGRSLISWNAMIAGYVHAG-YGSRALATFGMMQEAKIKERPDEFTLTSLLKACS 584

Query: 400  NLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
            +       +Q++   V+ G        +  SL+ +Y + G +  ARKAF+ + EK ++S+
Sbjct: 585  STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAFDQIKEKTMISW 644

Query: 458  NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
            ++++  YA+  +  +A  L   +++      ++  +S++   +    + +G+Q+ A ++K
Sbjct: 645  SSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQGKQMQALVVK 704

Query: 518  --SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
              SG E++  + N+L+ MY +C  V+ A + F EM+ ++VISWT MITG+ KHG   +A+
Sbjct: 705  LPSGLETS--VSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKHGLGKKAV 762

Query: 576  EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
             IF KML   I+P+ + Y+AVLSACSH+G+I EG + F  + +  GI  R+EHYAC+VDL
Sbjct: 763  SIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEHYACVVDL 822

Query: 636  LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
            LGR+G L EA   + +MP+  +V +W+T L  CRVHGD ELGK   +++L  D ++PA +
Sbjct: 823  LGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDGKNPANY 882

Query: 696  ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
            +++SNLY  AG+W    N R+    + L KEAG SW+E + +VH F  GE SHP TL I 
Sbjct: 883  VMMSNLYGQAGYWNEQGNARELGSIKGLQKEAGMSWVEIEREVHFFRSGEDSHPLTLVIQ 942

Query: 756  AELDQLALKIK-EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS---TSKSKP 811
              L ++  +++ E GY+      LH++++E K + L  HSEK+A+   L +     K K 
Sbjct: 943  ETLKEVERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKT 1002

Query: 812  IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
            IRVFKNLRVC DCH  IK +S +T    V+RD+ RFH  +DG CSC DY
Sbjct: 1003 IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1051



 Score =  202 bits (514), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 143/504 (28%), Positives = 254/504 (50%), Gaps = 16/504 (3%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N LI +Y KC +   A K+F SM  +R++VSW++++S +V  G    ++ +F EM
Sbjct: 403 NLITSNYLIDMYCKCREQLIAYKVFDSM-PERNVVSWTALMSGHVLNGDLNGSLSLFTEM 461

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  PNE+ FS  ++AC     +  G  I+GF LK G F+  V VG +L+DM+ K   
Sbjct: 462 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG-FEMMVEVGNSLVDMYSKCG- 519

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF--LPDRFTLSGV 289
            +  A KVF  M  ++ + W  MI      G    A+  F  M  +     PD FTL+ +
Sbjct: 520 RINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDEFTLTSL 579

Query: 290 VSACSELELFTSGKQLHSWAIRTGLAL--DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           + ACS   +  +GKQ+H + +R+G        +  SLVD+Y KC   G++  +RK FD++
Sbjct: 580 LKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC---GNLFSARKAFDQI 636

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            +  ++SW+++I GY Q G    EA+ LF  + +     + F  +S++    +       
Sbjct: 637 KEKTMISWSSLILGYAQEGDF-VEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQQG 695

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +Q+    VK    L+  V NSL+ MY + G +++A K F  +  K+++S+  M+  Y K+
Sbjct: 696 KQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLKDVISWTVMITGYGKH 755

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCI 526
              +KA  + +++    +      + ++LS  S  G I +GE++ ++++++ G +     
Sbjct: 756 GLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETQGIKPRVEH 815

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKML-AD 584
           Y  ++ +  R   ++ A  +   M  + NV  W ++++    HG      E+   +L  D
Sbjct: 816 YACVVDLLGRAGRLKEAKHLVDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRID 875

Query: 585 GIKPNGITYIAVLSACSHAGLISE 608
           G  P    Y+ + +    AG  +E
Sbjct: 876 GKNP--ANYVMMSNLYGQAGYWNE 897



 Score =  191 bits (484), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/405 (30%), Positives = 215/405 (53%), Gaps = 18/405 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+ +G +  ++     M ++G +P+  T+S  LK+C        G  +H    +   E  
Sbjct: 445 HVLNGDLNGSLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 504

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSL+ +YSKCG +NEA K+F+ M   R ++SW++MI+ YV+ G    A+  F  M 
Sbjct: 505 VEVGNSLVDMYSKCGRINEAEKVFRWMVG-RSLISWNAMIAGYVHAGYGSRALATFGMMQ 563

Query: 173 ELGFC--PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-DSDVCVGCALIDMFVKG 229
           E      P+E+  +++++ACS+T  +  G  I+GFL++ G+   S   +  +L+D++VK 
Sbjct: 564 EAKIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 623

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             +L SA K FD++ EK  + W+ +I    Q G   +A+ LF  +       D F LS +
Sbjct: 624 G-NLFSARKAFDQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSI 682

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +   ++  L   GKQ+ +  ++    L+  V  SLVDMY KC   G VD++ K F  M  
Sbjct: 683 IGVFADFALLQQGKQMQALVVKLPSGLETSVSNSLVDMYLKC---GLVDEAEKCFAEMQL 739

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT +ITGY +  G  K+AV +F+ M++  + P+   + +VL AC +       E+
Sbjct: 740 KDVISWTVMITGYGKH-GLGKKAVSIFNKMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 798

Query: 410 VY-----THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           ++     T  +K       CV    + +  R+GR+++A+   +++
Sbjct: 799 LFSKLLETQGIKPRVEHYACV----VDLLGRAGRLKEAKHLVDTM 839



 Score =  169 bits (428), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/377 (28%), Positives = 197/377 (52%), Gaps = 13/377 (3%)

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           +G  L++     L+DMY KC        + KVFD M + NV+SWTA+++G+V +G  +  
Sbjct: 398 SGSGLNLITSNYLIDMYCKCREQLI---AYKVFDSMPERNVVSWTALMSGHVLNGDLNG- 453

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           ++ LF++M +  + PN FTF++ LKACG L       Q++   +K G  +   VGNSL+ 
Sbjct: 454 SLSLFTEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVD 513

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT--SA 489
           MY++ GR+ +A K F  +  ++L+S+N M+  Y       +A      +++  +      
Sbjct: 514 MYSKCGRINEAEKVFRWMVGRSLISWNAMIAGYVHAGYGSRALATFGMMQEAKIKERPDE 573

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFE--SNHCIYNALISMYSRCANVEAAFQVF 547
           +T  SLL   SS G I  G+QIH  +++SGF   S+  I  +L+ +Y +C N+ +A + F
Sbjct: 574 FTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGNLFSARKAF 633

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
            +++++ +ISW+S+I G+A+ G    A+ +F ++     + +     +++   +   L+ 
Sbjct: 634 DQIKEKTMISWSSLILGYAQEGDFVEAMGLFKRLQELSSQIDSFVLSSIIGVFADFALLQ 693

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +G K  +++  +            +VD+  + G + EA +    M L  DV+ W   +  
Sbjct: 694 QG-KQMQALVVKLPSGLETSVSNSLVDMYLKCGLVDEAEKCFAEMQLK-DVISWTVMITG 751

Query: 668 CRVHGDTELGKHAAEMI 684
              HG   LGK A  + 
Sbjct: 752 YGKHG---LGKKAVSIF 765


>gi|302812982|ref|XP_002988177.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
 gi|300143909|gb|EFJ10596.1| hypothetical protein SELMODRAFT_127579 [Selaginella moellendorffii]
          Length = 742

 Score =  477 bits (1228), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/753 (33%), Positives = 432/753 (57%), Gaps = 24/753 (3%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y+ C    +A   F ++  +R++ SW+ +++++   G+  + +     M + G  P+  
Sbjct: 1   MYAHCDSPGDAKAAFDAL-EQRNLYSWTGLVAAFAISGQSKETLRALERMRQDGVRPDAV 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
            F   + +C + E++  G  I+  ++     + D  V  AL++M+ K GS  L  A +VF
Sbjct: 60  TFITALGSCGDPESLRDGIRIHQMVVD-SRLEIDPKVSNALLNMYKKCGS--LSHAKRVF 116

Query: 241 DKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
            KM   +N + W++M       G   +A+R F  M+L G    +  +  ++SACS   L 
Sbjct: 117 AKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALV 176

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD--HNVMSWTA 357
             G+ +HS    +G   ++ V  +++ MY +C   G+V+++RKVFD M +   +V+SW  
Sbjct: 177 QDGRMIHSCIALSGFESELLVANAVMTMYGRC---GAVEEARKVFDAMDEALRDVVSWNI 233

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +++ YV +  R K+A++L+  M   Q+ P+  T+ S+L AC +  D  +   ++   V  
Sbjct: 234 MLSTYVHND-RGKDAIQLYQRM---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVND 289

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA---F 474
               +  VGN+L+SMYA+ G   +AR  F+ + +++++S+ T++ AY +     +A   F
Sbjct: 290 ELEKNVIVGNALVSMYAKCGSHTEARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLF 349

Query: 475 ELLHEIEDTG----VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           + + E+E  G    V   A  F ++L+  + + A+ +G+ +  +    G  S+  +  A+
Sbjct: 350 QQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAV 409

Query: 531 ISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           +++Y +C  +E A ++F  +  R +V  W +MI  +A+ G +  AL++F++M  +G++P+
Sbjct: 410 VNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYAQFGQSHEALKLFWRMEMEGVRPD 469

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR-MEHYACMVDLLGRSGSLTEALEF 648
             +++++L ACSH GL  +G  +F SM  E+  V R ++H+ C+ DLLGR G L EA EF
Sbjct: 470 SFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEF 529

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           +  +P+  D + W + L ACR H D +  K  A  +L  +P+    ++ LSN+YA    W
Sbjct: 530 LEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLLRLEPRCATGYVALSNIYAELQKW 589

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             VA +RK M E+ + KE G S IE    +H F  G+ +HP+  EI  EL +L  ++KE 
Sbjct: 590 HAVAKVRKFMAEQGVKKERGVSTIEIGKYMHDFATGDDAHPRNREIREELAKLHSQMKEC 649

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+PDT  VLH ++E++K + LF HSE++A+A GLIST    P+RV KNLRVC DCHTA 
Sbjct: 650 GYVPDTKMVLHFVDEQEKERLLFSHSERLAIALGLISTPLGTPLRVTKNLRVCSDCHTAT 709

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IS + GR+IV+RD  RFH  KDGKCSC DYW
Sbjct: 710 KLISKIAGRKIVVRDPTRFHLFKDGKCSCQDYW 742



 Score =  236 bits (602), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 161/556 (28%), Positives = 281/556 (50%), Gaps = 26/556 (4%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++ +  L+ M Q G  PD  T+   L SC    +   G  +H ++  S+LE +  + 
Sbjct: 37  GQSKETLRALERMRQDGVRPDAVTFITALGSCGDPESLRDGIRIHQMVVDSRLEIDPKVS 96

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+++Y KCG L+ A ++F  M   R+++SWS M  ++   G   +A+  F  ML LG 
Sbjct: 97  NALLNMYKKCGSLSHAKRVFAKMERTRNVISWSIMAGAHALHGNVWEALRHFRFMLLLGI 156

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
              +     ++ ACS+   V  G +I+  +   G F+S++ V  A++ M+ + G+V  E 
Sbjct: 157 KATKSAMVTILSACSSPALVQDGRMIHSCIALSG-FESELLVANAVMTMYGRCGAV--EE 213

Query: 236 AYKVFDKMTE--KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           A KVFD M E  ++ V W +M++        +DAI+L+  M L    PD+ T   ++SAC
Sbjct: 214 ARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRMQLR---PDKVTYVSLLSAC 270

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S  E    G+ LH   +   L  +V VG +LV MYAKC   GS  ++R VFD+M   +++
Sbjct: 271 SSAEDVGLGRVLHKQIVNDELEKNVIVGNALVSMYAKC---GSHTEARAVFDKMEQRSII 327

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQ-------GQVAPNHFTFASVLKACGNLLDSNV 406
           SWT II+ YV+      EA  LF  M++        +V P+   F ++L AC ++     
Sbjct: 328 SWTTIISAYVRR-RLVAEACHLFQQMLELEKNGSSQRVKPDALAFVTILNACADVSALEQ 386

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-YNTMVDAYA 465
            + V   A   G + D  VG +++++Y + G +E+AR+ F+++  +  V  +N M+  YA
Sbjct: 387 GKMVSEQAASCGLSSDKAVGTAVVNLYGKCGEIEEARRIFDAVCSRPDVQLWNAMIAVYA 446

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +   S +A +L   +E  GV   +++F S+L   S  G   +G+     +          
Sbjct: 447 QFGQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGLEDQGKSYFTSMTTEYRNVTRT 506

Query: 526 I--YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKML 582
           I  +  +  +  R   ++ A +  +++  + + ++WTS++     H    RA E+  K+L
Sbjct: 507 IQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSLLAACRNHRDLKRAKEVANKLL 566

Query: 583 ADGIKPNGITYIAVLS 598
              ++P   T    LS
Sbjct: 567 R--LEPRCATGYVALS 580



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 116/440 (26%), Positives = 224/440 (50%), Gaps = 21/440 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G V +A+     M   G          +L +C        G+++HS +  S  E  
Sbjct: 135 HALHGNVWEALRHFRFMLLLGIKATKSAMVTILSACSSPALVQDGRMIHSCIALSGFESE 194

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
            ++ N+++++Y +CG + EA K+F +M    RD+VSW+ M+S+YV+  +  DAI ++  M
Sbjct: 195 LLVANAVMTMYGRCGAVEEARKVFDAMDEALRDVVSWNIMLSTYVHNDRGKDAIQLYQRM 254

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
                 P++  + +++ ACS+ E+V +G +++  ++     + +V VG AL+ M+ K   
Sbjct: 255 ---QLRPDKVTYVSLLSACSSAEDVGLGRVLHKQIVN-DELEKNVIVGNALVSMYAKCGS 310

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-------LSGFLPDRF 284
             E A  VFDKM +++ + WT +I+   +     +A  LF  M+            PD  
Sbjct: 311 HTE-ARAVFDKMEQRSIISWTTIISAYVRRRLVAEACHLFQQMLELEKNGSSQRVKPDAL 369

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
               +++AC+++     GK +   A   GL+ D  VG ++V++Y KC   G ++++R++F
Sbjct: 370 AFVTILNACADVSALEQGKMVSEQAASCGLSSDKAVGTAVVNLYGKC---GEIEEARRIF 426

Query: 345 DRMLDH-NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           D +    +V  W A+I  Y Q  G+  EA+KLF  M    V P+ F+F S+L AC +   
Sbjct: 427 DAVCSRPDVQLWNAMIAVYAQF-GQSHEALKLFWRMEMEGVRPDSFSFVSILLACSHTGL 485

Query: 404 SNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTM 460
            +  +  +T      R +   + +   +  +  R GR+++A +  E L  + + V++ ++
Sbjct: 486 EDQGKSYFTSMTTEYRNVTRTIQHFGCVADLLGRGGRLKEAEEFLEKLPVKPDAVAWTSL 545

Query: 461 VDAYAKNLNSEKAFELLHEI 480
           + A   + + ++A E+ +++
Sbjct: 546 LAACRNHRDLKRAKEVANKL 565


>gi|147770957|emb|CAN76247.1| hypothetical protein VITISV_023383 [Vitis vinifera]
          Length = 820

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 247/617 (40%), Positives = 375/617 (60%), Gaps = 5/617 (0%)

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           K  V WT +IT  +       A+ LF  M  SG  P++FT S ++SA +   +   G+QL
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           HS   + G   ++ VG +LVDMYAKC     +  + +VFD+M + N++SW ++I G+  +
Sbjct: 268 HSLIHKHGFDANIFVGTALVDMYAKC---ADMHSAVRVFDQMPERNLVSWNSMIVGFFHN 324

Query: 366 GGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
              D+ AV +F D+++ + V PN  + +SVL AC N+   N   QV+   VK G      
Sbjct: 325 NLYDR-AVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTY 383

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V NSL+ MY +    ++  K F+ + ++++V++N +V  + +N   E+A      +   G
Sbjct: 384 VMNSLMDMYFKCRFFDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREG 443

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +     +F+++L  ++S+ A+ +G  IH +IIK G+  N CI  +LI+MY++C ++  A+
Sbjct: 444 ILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVDAY 503

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           QVF+ +ED NVISWT+MI+ +  HG A + +E+F  ML++GI+P+ +T++ VLSACSH G
Sbjct: 504 QVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTG 563

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            + EG  HF SM   H +    EHYACMVDLLGR+G L EA  FI SMP+     VW   
Sbjct: 564 RVEEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGAL 623

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           LGACR +G+ ++G+ AAE + E +P +P  ++LL+N+   +G  E    +R+ M    + 
Sbjct: 624 LGACRKYGNLKMGREAAERLFEMEPYNPGNYVLLANMCTRSGRLEEANEVRRLMGVNGVR 683

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           KE GCSWI+  N    F   + SH  + EIY  L++L   +K+ GY+ +T FV + LEE 
Sbjct: 684 KEPGCSWIDVKNMTFVFTAHDRSHSSSDEIYKMLEKLEKLVKKKGYVAETEFVTNHLEEN 743

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           ++ Q L+ HSEK+A+AFGL++     PIR+ KNLR CG CHT +K  S +  REI++RD 
Sbjct: 744 EEEQGLWYHSEKLALAFGLLTLPIDSPIRIKKNLRTCGHCHTVMKLASKIFDREIIVRDI 803

Query: 845 NRFHHIKDGKCSCNDYW 861
           NRFH   DG CSC DYW
Sbjct: 804 NRFHRFADGFCSCGDYW 820



 Score =  215 bits (548), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 149/540 (27%), Positives = 277/540 (51%), Gaps = 31/540 (5%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK-SMGNK 142
           LL + I++R+      +H+ +  +       + N+LI+LY+KCG LN+A  +F  +  + 
Sbjct: 148 LLNTAIQTRSLKHATQIHTQIIINNYTSLPFLFNNLINLYAKCGCLNQALLLFSITHHHF 207

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           + IV+W+S+I+   +    + A+ +F +M   G  PN++ FS+++ A + T  V  G  +
Sbjct: 208 KTIVTWTSLITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQL 267

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  + K G FD+++ VG AL+DM+ K   D+ SA +VFD+M E+N V W  MI       
Sbjct: 268 HSLIHKHG-FDANIFVGTALVDMYAK-CADMHSAVRVFDQMPERNLVSWNSMIVGFFHNN 325

Query: 263 CPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
               A+ +F D++     +P+  ++S V+SAC+ +     G+Q+H   ++ GL     V 
Sbjct: 326 LYDRAVGVFKDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVM 385

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SL+DMY KC      D+  K+F  + D +V++W  ++ G+VQ+  + +EA   F  M +
Sbjct: 386 NSLMDMYFKCRF---FDEGVKLFQCVGDRDVVTWNVLVMGFVQN-DKFEEACNYFWVMRR 441

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + P+  +F++VL +  +L   +    ++   +K G   + C+  SLI+MYA+ G + D
Sbjct: 442 EGILPDEASFSTVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKCGSLVD 501

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A + FE + + N++S+  M+ AY  +  + +  EL   +   G+  S  TF  +LS  S 
Sbjct: 502 AYQVFEGIEDHNVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH 561

Query: 502 IGAIGKG-------EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
            G + +G       ++IH   +  G E     Y  ++ +  R   ++ A +  + M  + 
Sbjct: 562 TGRVEEGLAHFNSMKKIHD--MNPGPEH----YACMVDLLGRAGWLDEAKRFIESMPMKP 615

Query: 555 VIS-WTSMITGFAKHG---FAARALEIFYKMLADGIKP-NGITYIAVLSACSHAGLISEG 609
             S W +++    K+G       A E  ++M     +P N   Y+ + + C+ +G + E 
Sbjct: 616 TPSVWGALLGACRKYGNLKMGREAAERLFEM-----EPYNPGNYVLLANMCTRSGRLEEA 670



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 226/447 (50%), Gaps = 20/447 (4%)

Query: 50  LIYHLNDGRVQ-KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           LI HL+   +  +A+   + M   G +P+  T+S +L +   +     G+ +HSL+ +  
Sbjct: 216 LITHLSHFNMHLQALSLFNQMRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHG 275

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
            + N  +  +L+ +Y+KC D++ A ++F  M  +R++VSW+SMI  + +      A+ +F
Sbjct: 276 FDANIFVGTALVDMYAKCADMHSAVRVFDQMP-ERNLVSWNSMIVGFFHNNLYDRAVGVF 334

Query: 169 VEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
            ++L E    PNE   S+V+ AC+N   +  G  ++G ++K G       +  +L+DM+ 
Sbjct: 335 KDVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKYGLVPLTYVMN-SLMDMYF 393

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K     +   K+F  + +++ V W +++    Q     +A   F  M   G LPD  + S
Sbjct: 394 KCRF-FDEGVKLFQCVGDRDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFS 452

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V+ + + L     G  +H   I+ G   ++C+  SL+ MYAKC   GS+ D+ +VF+ +
Sbjct: 453 TVLHSSASLAALHQGTAIHDQIIKLGYVKNMCILGSLITMYAKC---GSLVDAYQVFEGI 509

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            DHNV+SWTA+I+ Y Q  G   + ++LF  M+   + P+H TF  VL AC +   +   
Sbjct: 510 EDHNVISWTAMISAY-QLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSH---TGRV 565

Query: 408 EQVYTHAVKRGRALDDCVGNS----LISMYARSGRMEDARKAFESLFEKNLVS-YNTMVD 462
           E+   H     +  D   G      ++ +  R+G +++A++  ES+  K   S +  ++ 
Sbjct: 566 EEGLAHFNSMKKIHDMNPGPEHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLG 625

Query: 463 AYAKNLN---SEKAFELLHEIEDTGVG 486
           A  K  N     +A E L E+E    G
Sbjct: 626 ACRKYGNLKMGREAAERLFEMEPYNPG 652


>gi|86438643|emb|CAJ26357.1| Selenium binding protein [Brachypodium sylvaticum]
          Length = 624

 Score =  477 bits (1227), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 235/591 (39%), Positives = 365/591 (61%), Gaps = 6/591 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD + SG L P        ++AC++ +     +++H     +    D  +  SL+ +Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCK 98

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GSV ++ KVFD+M   +++SWT++I GY Q+     EA+ L   M++G+  PN FT
Sbjct: 99  C---GSVVEAHKVFDKMRKKDMVSWTSLIAGYAQND-MPAEAIGLLPGMLKGRFKPNGFT 154

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FAS+LKA G   DS +  Q++  AVK     D  VG++L+ MYAR G+M+ A   F+ L 
Sbjct: 155 FASLLKAAGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            KN VS+N ++  +A+  + E A  +  E++  G   + +T++S+ SG + IGA+ +G+ 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKW 274

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA ++KS  +    + N ++ MY++  ++  A +VF+ + ++++++W SM+T FA++G 
Sbjct: 275 VHAHMVKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGL 334

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+  F +M   GI  N IT++ +L+ACSH GL+ EG KH+  M  E+ +   +EHY 
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQITFLCILTACSHGGLVKEG-KHYFDMIKEYNLEPEIEHYV 393

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
            +VDLLGR+G L  AL FI  MP+     VW   L ACR+H + ++G+ AA+ + + DP 
Sbjct: 394 TVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPD 453

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D    +LL N+YAS GHW+  A +RK MK   + KE  CSW+E  N VH F   + +HP+
Sbjct: 454 DSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIGNSVHMFVANDDTHPR 513

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             EIY   D++++KI++ GY+PD ++VL  ++E+++   L  HSEKIA+AF LI      
Sbjct: 514 AEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGA 573

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IR+ KN+R+CGDCH+A KYIS V  REIV+RD+NRFHH  +G CSC DYW
Sbjct: 574 TIRIMKNIRICGDCHSAFKYISKVFEREIVVRDTNRFHHFSNGSCSCGDYW 624



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 111/326 (34%), Positives = 186/326 (57%), Gaps = 9/326 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P    Y   + +C +S+N    + +H  L  S+ E ++ + NSLI LY KCG + EA+K+
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHGHLASSRFEGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K+D+VSW+S+I+ Y       +AI +   ML+  F PN + F+++++A     +
Sbjct: 109 FDKM-RKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAGAYAD 167

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
             IG  I+   +KC + + DV VG AL+DM+ + G +D+ +A  VFDK+  KN V W  +
Sbjct: 168 SGIGGQIHALAVKCDWHE-DVYVGSALLDMYARCGKMDMATA--VFDKLDSKNGVSWNAL 224

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+   + G    A+ +F +M  +GF    FT S + S  + +     GK +H+  +++  
Sbjct: 225 ISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHMVKSRQ 284

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            L   VG +++DMYAK    GS+ D+RKVF+R+L+ ++++W +++T + Q  G  KEAV 
Sbjct: 285 KLTAFVGNTMLDMYAK---SGSMIDARKVFERVLNKDLVTWNSMLTAFAQY-GLGKEAVS 340

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGN 400
            F +M +  +  N  TF  +L AC +
Sbjct: 341 HFEEMRKSGIYLNQITFLCILTACSH 366



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 118/395 (29%), Positives = 201/395 (50%), Gaps = 9/395 (2%)

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P    + A I AC+ ++N+     I+G L     F+ D  +  +LI ++ K GSV   
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHGHL-ASSRFEGDAFLDNSLIHLYCKCGSV--V 103

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A+KVFDKM +K+ V WT +I    Q   P +AI L   M+   F P+ FT + ++ A  
Sbjct: 104 EAHKVFDKMRKKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAAG 163

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                  G Q+H+ A++     DV VG +L+DMYA+C   G +D +  VFD++   N +S
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARC---GKMDMATAVFDKLDSKNGVS 220

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A+I+G+ + G   + A+ +F++M +      HFT++S+      +      + V+ H 
Sbjct: 221 WNALISGFARKGD-GETALMVFAEMQRNGFEATHFTYSSIFSGLAGIGALEQGKWVHAHM 279

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           VK  + L   VGN+++ MYA+SG M DARK FE +  K+LV++N+M+ A+A+    ++A 
Sbjct: 280 VKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAV 339

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               E+  +G+  +  TF  +L+  S  G + +G+     I +   E     Y  ++ + 
Sbjct: 340 SHFEEMRKSGIYLNQITFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLL 399

Query: 535 SRCANVEAAFQ-VFKEMEDRNVISWTSMITGFAKH 568
            R   +  A   +FK   +     W +++     H
Sbjct: 400 GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434


>gi|224061617|ref|XP_002300569.1| predicted protein [Populus trichocarpa]
 gi|222847827|gb|EEE85374.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 246/575 (42%), Positives = 361/575 (62%), Gaps = 11/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           VV AC +L     GK++H   ++ G   DV V  SLV MY++    G V D+RK+FD M 
Sbjct: 3   VVKACGDL---LDGKKIHCLVLKLGFEWDVFVAASLVHMYSRF---GLVGDARKLFDDMP 56

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +  SW A+I+GY Q+G    EA+ +  +M    V  +  T ASVL  C  + D    +
Sbjct: 57  ARDRGSWNAMISGYCQNGNA-AEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGK 115

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            ++ + +K G   +  V N+LI+MYA+ G +  A+K F  L  K++VS+NT++  YA+N 
Sbjct: 116 LIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVF-GLLIKDVVSWNTLITGYAQNG 174

Query: 469 NSEKAFE--LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
            + +A E  LL E E   +  +  T+ S+L   S +GA+ +G +IH ++IK+   S+  +
Sbjct: 175 LASEAIEVYLLME-EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFV 233

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
              LI MY +C  ++ A  +F ++  +N + W +MI+ +  HG   +ALE+F +M A+ +
Sbjct: 234 GTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAERV 293

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KP+ IT++++LSACSH+GL+S+    F  M +E+GI   ++HY CMVDL GR+G L  A 
Sbjct: 294 KPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMAF 353

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            FI+ MP+  D   W   L ACR+HG+ ELGKHA+E + E D ++   ++LLSN+YA+ G
Sbjct: 354 NFIKKMPIQPDASAWGALLNACRIHGNIELGKHASERLFEVDSENVGYYVLLSNIYANVG 413

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE V ++R   ++R L K  G S I  +NKV  F+ G  +HPK  EIY EL  L  KIK
Sbjct: 414 KWEGVDDVRSLARDRGLRKNPGWSSIILNNKVDVFYTGNQTHPKCEEIYRELRDLTSKIK 473

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             GY+PD  FVL ++EE++K   L  HSE++A+A+G+ISTS   PIR+FKNLRVCGDCHT
Sbjct: 474 TIGYVPDFCFVLQDVEEDEKEHILMGHSERLAIAYGIISTSPKTPIRIFKNLRVCGDCHT 533

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K+IS++T REI++RDS+RFHH K G CSC DYW
Sbjct: 534 VTKFISIITEREIIVRDSSRFHHFKGGTCSCGDYW 568



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 200/387 (51%), Gaps = 13/387 (3%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V++AC +  +   G  I+  +LK G F+ DV V  +L+ M+ +  + +  A K+FD M  
Sbjct: 3   VVKACGDLLD---GKKIHCLVLKLG-FEWDVFVAASLVHMYSRFGL-VGDARKLFDDMPA 57

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++   W  MI+   Q G   +A+ +  +M L G   D  T++ V+  C+++    SGK +
Sbjct: 58  RDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLI 117

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H + I+ GL  ++ V  +L++MYAK    GS+  ++KVF  +L  +V+SW  +ITGY Q+
Sbjct: 118 HLYVIKHGLEFELFVSNALINMYAKF---GSLGHAQKVFG-LLIKDVVSWNTLITGYAQN 173

Query: 366 GGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
            G   EA++++  M +  ++ PN  T+ S+L A  ++       +++   +K     D  
Sbjct: 174 -GLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVF 232

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           VG  LI MY + G+++DA   F  +  KN V +N M+  Y  + + EKA EL  E++   
Sbjct: 233 VGTCLIDMYGKCGKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEKALELFREMKAER 292

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAA 543
           V     TF SLLS  S  G +   +     + +  G + +   Y  ++ ++ R   +E A
Sbjct: 293 VKPDHITFVSLLSACSHSGLVSDAQWCFNMMEEEYGIKPSLKHYGCMVDLFGRAGELEMA 352

Query: 544 FQVFKEMEDR-NVISWTSMITGFAKHG 569
           F   K+M  + +  +W +++     HG
Sbjct: 353 FNFIKKMPIQPDASAWGALLNACRIHG 379



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 132/476 (27%), Positives = 220/476 (46%), Gaps = 58/476 (12%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK +H L+ +   E +  +  SL+ +YS+ G + +A K+F  M   RD  SW++MIS Y 
Sbjct: 13  GKKIHCLVLKLGFEWDVFVAASLVHMYSRFGLVGDARKLFDDM-PARDRGSWNAMISGYC 71

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G   +A+ +  EM   G   +    ++V+  C+   ++  G +I+ +++K G  + ++
Sbjct: 72  QNGNAAEALDIADEMRLEGVKMDAITVASVLPVCAQVGDILSGKLIHLYVIKHG-LEFEL 130

Query: 217 CVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            V  ALI+M+ K GS  L  A KVF  +  K+ V W  +IT   Q G   +AI ++L M 
Sbjct: 131 FVSNALINMYAKFGS--LGHAQKVFGLLI-KDVVSWNTLITGYAQNGLASEAIEVYLLME 187

Query: 276 L-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
                +P++ T   ++ A S +     G ++H   I+  L  DV VG  L+DMY KC   
Sbjct: 188 EHEEIIPNQGTWVSILPAYSHVGALQQGMRIHGQVIKNCLYSDVFVGTCLIDMYGKC--- 244

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G +DD+  +F ++   N + W A+I+ Y   G  +K A++LF +M   +V P+H TF S+
Sbjct: 245 GKLDDAISLFYQVPRKNSVPWNAMISCYGVHGDGEK-ALELFREMKAERVKPDHITFVSL 303

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-- 452
           L AC                                   + SG + DA+  F  + E+  
Sbjct: 304 LSAC-----------------------------------SHSGLVSDAQWCFNMMEEEYG 328

Query: 453 ---NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
              +L  Y  MVD + +    E AF  + ++    +   A  + +LL+     G I  G+
Sbjct: 329 IKPSLKHYGCMVDLFGRAGELEMAFNFIKKMP---IQPDASAWGALLNACRIHGNIELGK 385

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV---ISWTSMI 562
               R+ +   E N   Y  L ++Y+     E    V     DR +     W+S+I
Sbjct: 386 HASERLFEVDSE-NVGYYVLLSNIYANVGKWEGVDDVRSLARDRGLRKNPGWSSII 440



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 85/283 (30%), Positives = 139/283 (49%), Gaps = 8/283 (2%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           SR  L   +   F   P       N +I  +  +G   +A+   D M  +G   D  T +
Sbjct: 40  SRFGLVGDARKLFDDMPARDRGSWNAMISGYCQNGNAAEALDIADEMRLEGVKMDAITVA 99

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            +L  C +  +   GKL+H  + +  LE    + N+LI++Y+K G L  A K+F  +   
Sbjct: 100 SVLPVCAQVGDILSGKLIHLYVIKHGLEFELFVSNALINMYAKFGSLGHAQKVFGLL--I 157

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +D+VSW+++I+ Y   G   +AI +++ M E     PN+  + +++ A S+   +  G  
Sbjct: 158 KDVVSWNTLITGYAQNGLASEAIEVYLLMEEHEEIIPNQGTWVSILPAYSHVGALQQGMR 217

Query: 202 IYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           I+G ++K C Y  SDV VG  LIDM+ K    L+ A  +F ++  KN+V W  MI+    
Sbjct: 218 IHGQVIKNCLY--SDVFVGTCLIDMYGKCG-KLDDAISLFYQVPRKNSVPWNAMISCYGV 274

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            G    A+ LF +M      PD  T   ++SACS   L +  +
Sbjct: 275 HGDGEKALELFREMKAERVKPDHITFVSLLSACSHSGLVSDAQ 317


>gi|225446691|ref|XP_002277494.1| PREDICTED: pentatricopeptide repeat-containing protein At2g41080
           [Vitis vinifera]
          Length = 657

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/627 (37%), Positives = 375/627 (59%), Gaps = 29/627 (4%)

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           C +  ++   D   S    +    S ++ +C      + GKQLHS  I +G + D  +  
Sbjct: 32  CSKGHLKQAFDRFSSHIWSEPSLFSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISN 91

Query: 323 SLVDMYAKC-TVDGSVD---------------------------DSRKVFDRMLDHNVMS 354
            L+++Y+KC  +D ++                             +RK+FD M + NV +
Sbjct: 92  HLLNLYSKCGQLDTAITLFGVMPRKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVAT 151

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A++ G +Q    ++E + LFS M +    P+ F   SVL+ C  L       QV+ + 
Sbjct: 152 WNAMVAGLIQFE-FNEEGLGLFSRMNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYV 210

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
            K G   +  V +SL  MY + G + +  +   ++  +N+V++NT++   A+N   E+  
Sbjct: 211 RKCGFEFNLVVVSSLAHMYMKCGSLGEGERLIRAMPSQNVVAWNTLIAGRAQNGYPEEVL 270

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           +  + ++  G      TF S++S  S +  +G+G+QIHA +IK+G      + ++LISMY
Sbjct: 271 DQYNMMKMAGFRPDKITFVSVISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMY 330

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           SRC  +E + +VF E E+ +V+ W+SMI  +  HG    A+++F +M  + ++ N +T++
Sbjct: 331 SRCGCLEYSLKVFLECENGDVVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFL 390

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L ACSH GL  +G K F  M +++G+  R+EHY CMVDLLGR GS+ EA   IRSMP+
Sbjct: 391 SLLYACSHCGLKEKGIKFFDLMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPV 450

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
            ADV+ W+T L AC++H  TE+ +  +E +   DP+DP  ++LLSN++AS   W+ V+++
Sbjct: 451 KADVITWKTLLSACKIHKKTEMARRISEEVFRLDPRDPVPYVLLSNIHASDKRWDDVSDV 510

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           RK M++R L KE G SW+E  N++H+F +G+ SHPK++EI + L +L  ++K+ GY+PD 
Sbjct: 511 RKAMRDRKLKKEPGISWLEVKNQIHQFCMGDKSHPKSVEIASYLRELTSEMKKRGYVPDI 570

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           + VLH+++ E K   L  HSEK+A+AF L+ T    PIRV KNLRVC DCH AIKYIS +
Sbjct: 571 DSVLHDMDVEDKEYSLVHHSEKLAIAFALLYTPVGTPIRVIKNLRVCSDCHVAIKYISEI 630

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + REI++RDS+RFHH K+G+CSC DYW
Sbjct: 631 SNREIIVRDSSRFHHFKNGRCSCGDYW 657



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 235/489 (48%), Gaps = 50/489 (10%)

Query: 28  LPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           L P +   F   P++   L+       + G +++A       +   + P L  +S LL+S
Sbjct: 6   LRPLTRRHFSTNPSSGSELTAEFTNLCSKGHLKQAFDRFS--SHIWSEPSL--FSHLLQS 61

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK----- 142
           CI   +  LGK +HSL+  S    +  I N L++LYSKCG L+ A  +F  M  K     
Sbjct: 62  CISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMPRKNIMSC 121

Query: 143 -------------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
                                    R++ +W++M++  +      + + +F  M ELGF 
Sbjct: 122 NILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSRMNELGFL 181

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+E+   +V+R C+    +  G  ++G++ KCG F+ ++ V  +L  M++K    L    
Sbjct: 182 PDEFALGSVLRGCAGLRALVAGRQVHGYVRKCG-FEFNLVVVSSLAHMYMKCG-SLGEGE 239

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           ++   M  +N V W  +I    Q G P + +  +  M ++GF PD+ T   V+S+CSEL 
Sbjct: 240 RLIRAMPSQNVVAWNTLIAGRAQNGYPEEVLDQYNMMKMAGFRPDKITFVSVISSCSELA 299

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G+Q+H+  I+ G +L V V  SL+ MY++C   G ++ S KVF    + +V+ W++
Sbjct: 300 TLGQGQQIHAEVIKAGASLIVSVISSLISMYSRC---GCLEYSLKVFLECENGDVVCWSS 356

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVA---EQVYT 412
           +I  Y    GR  EA+ LF+ M Q ++  N  TF S+L AC +  L +  +      V  
Sbjct: 357 MIAAY-GFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFDLMVEK 415

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
           + VK       C    ++ +  R G +E+A     S+  + +++++ T++ A   +  +E
Sbjct: 416 YGVKPRLEHYTC----MVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIHKKTE 471

Query: 472 KAFELLHEI 480
            A  +  E+
Sbjct: 472 MARRISEEV 480



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 108/417 (25%), Positives = 199/417 (47%), Gaps = 35/417 (8%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLL-------------------KCGYFDSDVCVGCAL- 222
           FS ++++C +  ++++G  ++  ++                   KCG  D+ + +   + 
Sbjct: 55  FSHLLQSCISENSLSLGKQLHSLIITSGCSSDKFISNHLLNLYSKCGQLDTAITLFGVMP 114

Query: 223 ------IDMFVKG---SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
                  ++ + G   S D  +A K+FD+M E+N   W  M+    Q     + + LF  
Sbjct: 115 RKNIMSCNILINGYFRSGDWVTARKMFDEMPERNVATWNAMVAGLIQFEFNEEGLGLFSR 174

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   GFLPD F L  V+  C+ L    +G+Q+H +  + G   ++ V  SL  MY KC  
Sbjct: 175 MNELGFLPDEFALGSVLRGCAGLRALVAGRQVHGYVRKCGFEFNLVVVSSLAHMYMKC-- 232

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            GS+ +  ++   M   NV++W  +I G  Q+ G  +E +  ++ M      P+  TF S
Sbjct: 233 -GSLGEGERLIRAMPSQNVVAWNTLIAGRAQN-GYPEEVLDQYNMMKMAGFRPDKITFVS 290

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           V+ +C  L      +Q++   +K G +L   V +SLISMY+R G +E + K F      +
Sbjct: 291 VISSCSELATLGQGQQIHAEVIKAGASLIVSVISSLISMYSRCGCLEYSLKVFLECENGD 350

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +V +++M+ AY  +    +A +L +++E   +  +  TF SLL   S  G   KG +   
Sbjct: 351 VVCWSSMIAAYGFHGRGVEAIDLFNQMEQEKLEANDVTFLSLLYACSHCGLKEKGIKFFD 410

Query: 514 RII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
            ++ K G +     Y  ++ +  R  +VE A  + + M  + +VI+W ++++    H
Sbjct: 411 LMVEKYGVKPRLEHYTCMVDLLGRYGSVEEAEALIRSMPVKADVITWKTLLSACKIH 467


>gi|356540347|ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/736 (34%), Positives = 420/736 (57%), Gaps = 15/736 (2%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVI 187
           L   +  F++  N++  V    +IS  + +  ++  +H F+  +++ G   N   +  + 
Sbjct: 30  LKSTHSSFRTHQNQQGQVENLHLIS--LAKQGKLRQVHEFIRNMDIAGISINPRSYEYLF 87

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           + C     ++ G + +  L +    +S+  +   ++ M+        +A + FDK+ +++
Sbjct: 88  KMCGTLGALSDGKLFHNRLQRMA--NSNKFIDNCILQMYCDCK-SFTAAERFFDKIVDRD 144

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
              W  +I+  T+ G   +A+ LFL M+  G +P+    S ++ + ++  +   GKQ+HS
Sbjct: 145 LSSWATIISAYTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHS 204

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             IR   A D+ +   + +MY KC   G +D +    ++M   + ++ T ++ GY Q+  
Sbjct: 205 QLIRIEFAADISIETLISNMYVKC---GWLDGAEVATNKMTRKSAVACTGLMVGYTQAA- 260

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
           R+++A+ LFS MI   V  + F F+ +LKAC  L D    +Q++++ +K G   +  VG 
Sbjct: 261 RNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGLESEVSVGT 320

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
            L+  Y +  R E AR+AFES+ E N  S++ ++  Y ++   ++A E+   I   GV  
Sbjct: 321 PLVDFYVKCARFEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLL 380

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           +++ + ++    S++  +  G QIHA  IK G  +     +A+I+MYS+C  V+ A Q F
Sbjct: 381 NSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKCGKVDYAHQAF 440

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
             ++  + ++WT++I   A HG A+ AL +F +M   G++PN +T+I +L+ACSH+GL+ 
Sbjct: 441 LAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVTFIGLLNACSHSGLVK 500

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           EG +   SM D++G+   ++HY CM+D+  R+G L EALE IRSMP   DV+ W++ LG 
Sbjct: 501 EGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKSLLGG 560

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
           C    + E+G  AA+ I   DP D A ++++ NLYA AG W+  A  RK M ERNL KE 
Sbjct: 561 CWSRRNLEIGMIAADNIFRLDPLDSATYVIMFNLYALAGKWDEAAQFRKMMAERNLRKEV 620

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK--EFGYLPDTNFVLHELEEEQ 785
            CSWI    KVH+F VG+  HP+T +IY++L +L +  K  E   L + N +    E + 
Sbjct: 621 SCSWIIVKGKVHRFVVGDRHHPQTEQIYSKLKELNVSFKKGEERLLNEENALCDFTERKD 680

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           +   L  HSE++A+A+GLI T+   PI VFKN R C DCH   K +S+VTGRE+V+RD N
Sbjct: 681 Q---LLDHSERLAIAYGLICTAADTPIMVFKNTRSCKDCHEFAKRVSVVTGRELVVRDGN 737

Query: 846 RFHHIKDGKCSCNDYW 861
           RFHHI  G+CSC DYW
Sbjct: 738 RFHHINSGECSCRDYW 753



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/422 (26%), Positives = 205/422 (48%), Gaps = 31/422 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR+ +A+     M   G  P+   +S L+ S        LGK +HS L R +   +
Sbjct: 155 YTEEGRIDEAVGLFLRMLDLGIIPNFSIFSTLIMSFADPSMLDLGKQIHSQLIRIEFAAD 214

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I   + ++Y KCG L+ A      M  ++  V+ + ++  Y    +  DA+ +F +M+
Sbjct: 215 ISIETLISNMYVKCGWLDGAEVATNKM-TRKSAVACTGLMVGYTQAARNRDALLLFSKMI 273

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   + + FS +++AC+   ++  G  I+ + +K G  +S+V VG  L+D +VK    
Sbjct: 274 SEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLG-LESEVSVGTPLVDFYVK-CAR 331

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E+A + F+ + E N   W+ +I    Q G    A+ +F  +   G L + F  + +  A
Sbjct: 332 FEAARQAFESIHEPNDFSWSALIAGYCQSGKFDRALEVFKTIRSKGVLLNSFIYNNIFQA 391

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS +     G Q+H+ AI+ GL   +    +++ MY+KC   G VD + + F  +   + 
Sbjct: 392 CSAVSDLICGAQIHADAIKKGLVAYLSGESAMITMYSKC---GKVDYAHQAFLAIDKPDT 448

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++WTAII  +    G+  EA++LF +M    V PN  TF  +L AC            ++
Sbjct: 449 VAWTAIICAHAYH-GKASEALRLFKEMQGSGVRPNVVTFIGLLNACS-----------HS 496

Query: 413 HAVKRGRALDDCVG------------NSLISMYARSGRMEDARKAFESL-FEKNLVSYNT 459
             VK G+   D +             N +I +Y+R+G + +A +   S+ FE +++S+ +
Sbjct: 497 GLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRAGLLLEALEVIRSMPFEPDVMSWKS 556

Query: 460 MV 461
           ++
Sbjct: 557 LL 558



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 16/318 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +    R + A+     M  +G   D   +S++LK+C    + + GK +HS   +  L
Sbjct: 253 MVGYTQAARNRDALLLFSKMISEGVELDGFVFSIILKACAALGDLYTGKQIHSYCIKLGL 312

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E    +   L+  Y KC     A + F+S+    D  SWS++I+ Y   GK   A+ +F 
Sbjct: 313 ESEVSVGTPLVDFYVKCARFEAARQAFESIHEPNDF-SWSALIAGYCQSGKFDRALEVFK 371

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG---YFDSDVCVGCALIDMF 226
            +   G   N + ++ + +ACS   ++  G  I+   +K G   Y   +     A+I M+
Sbjct: 372 TIRSKGVLLNSFIYNNIFQACSAVSDLICGAQIHADAIKKGLVAYLSGE----SAMITMY 427

Query: 227 VK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
            K G VD   A++ F  + + +TV WT +I      G   +A+RLF +M  SG  P+  T
Sbjct: 428 SKCGKVDY--AHQAFLAIDKPDTVAWTAIICAHAYHGKASEALRLFKEMQGSGVRPNVVT 485

Query: 286 LSGVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
             G+++ACS   L   GKQ L S   + G+   +     ++D+Y++    G + ++ +V 
Sbjct: 486 FIGLLNACSHSGLVKEGKQFLDSMTDKYGVNPTIDHYNCMIDIYSRA---GLLLEALEVI 542

Query: 345 DRM-LDHNVMSWTAIITG 361
             M  + +VMSW +++ G
Sbjct: 543 RSMPFEPDVMSWKSLLGG 560


>gi|224092370|ref|XP_002309579.1| predicted protein [Populus trichocarpa]
 gi|222855555|gb|EEE93102.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  476 bits (1226), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 270/839 (32%), Positives = 455/839 (54%), Gaps = 86/839 (10%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LLKSC   R F     +H+ L  + L  +  I + +++      +L+ A++I  S  ++ 
Sbjct: 41  LLKSCSNIREF---SPIHAHLITANLIHDPEITSQVLAFLLSVNNLDCAHQIL-SYSHEP 96

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           + + W++++ + +  G   + +  +  M+  G   +   F  +I AC    +V +G  ++
Sbjct: 97  ESIIWNTLLENKLKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVH 156

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G +LKCG F  +  +   L+ ++ K    L+   ++F+KMT ++ + W  MI+     G 
Sbjct: 157 GRILKCG-FGRNKSLNNNLMGLYSKCG-KLKEVCQLFEKMTHRDVISWNTMISCYVLKGM 214

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
            R+A+ LF +M++SG LPD  T+  +VS C++L+    GK+LH + +   L +   +   
Sbjct: 215 YREALDLFDEMLVSGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNC 274

Query: 324 LVDMYAKC----------------TVD--------------GSVDDSRKVFDRMLDHNVM 353
           LVDMY+KC                 VD                +D +R++FD+M + +++
Sbjct: 275 LVDMYSKCGKMDEAHGLLSRCDESEVDVVLWTTLVSGYVKSNKIDKARQLFDKMNERSLV 334

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SWT +++GYVQ GG   E+++LF  M    V P+     +VL AC +L D ++   V+  
Sbjct: 335 SWTTMMSGYVQ-GGYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAF 393

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF----------------------- 450
            V  G  +D  +GN+L+ +YA+ G++++A + FE L                        
Sbjct: 394 IVTYGMLVDGFLGNALLDLYAKCGKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKA 453

Query: 451 --------EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
                   EK++VS+NTMV+AY K+    ++FE+  +++ + V     T  SLLS  + +
Sbjct: 454 RDFFNKIPEKDIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKV 513

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           GA+  G  ++  I K+    +  +  ALI MY +C  VE A+++F ++ ++NV  WT+M+
Sbjct: 514 GALNHGIWVNVYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMM 573

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
             +A  G A  A++++ +M   G+KP+ +T+IA+L+ACSH GL+ EG+K+F  +   + I
Sbjct: 574 AAYAMEGQALEAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNKLRSFYNI 633

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
           +  + HY CMVDLLGR G L E ++FI  MP+  DV +W + + ACR H + EL + A +
Sbjct: 634 IPTIHHYGCMVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFK 693

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            ++E DP +  AH+LLSN+YA AG W+ V+ +R ++ E  + K+ G + IE +  VH+F 
Sbjct: 694 QLIEIDPTNNGAHVLLSNIYADAGRWDDVSKVRTKLHETGVPKQPGFTMIEQNGVVHEFV 753

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
                    L +  ++++  L  +E   L DT                 QHSE++AVAFG
Sbjct: 754 ASNLVSADILCMLQDIERRLLVKQE---LSDTT---------------SQHSERLAVAFG 795

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LI+  ++ PIRV  ++R+C DCH+ +K IS    REIV+RD+ RFH   DG CSC DYW
Sbjct: 796 LINNQENSPIRVVNSVRMCRDCHSVMKLISQAYDREIVIRDNYRFHRFTDGHCSCKDYW 854



 Score =  232 bits (592), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 159/602 (26%), Positives = 289/602 (48%), Gaps = 71/602 (11%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L +G  Q+ +     M  +G   D+ T+  L+ +C ++ +  LG  VH  + +     N 
Sbjct: 109 LKEGCPQEVLECYYHMVTQGVLLDISTFHFLIHACCKNFDVKLGSEVHGRILKCGFGRNK 168

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + N+L+ LYSKCG L E  ++F+ M + RD++SW++MIS YV +G   +A+ +F EML 
Sbjct: 169 SLNNNLMGLYSKCGKLKEVCQLFEKMTH-RDVISWNTMISCYVLKGMYREALDLFDEMLV 227

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-------------------KCGYFDS 214
            G  P+E    +++  C+  +++ +G  ++ +++                   KCG  D 
Sbjct: 228 SGVLPDEITMVSLVSTCAKLKDLEMGKRLHLYIVDNKLWIRGSLLNCLVDMYSKCGKMDE 287

Query: 215 -------------DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
                        DV +   L+  +VK S  ++ A ++FDKM E++ V WT M++   Q 
Sbjct: 288 AHGLLSRCDESEVDVVLWTTLVSGYVK-SNKIDKARQLFDKMNERSLVSWTTMMSGYVQG 346

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   +++ LF  M     +PD   L  V+SAC  LE F  G+ +H++ +  G+ +D  +G
Sbjct: 347 GYYCESLELFQQMRFENVIPDEVALVTVLSACVHLEDFDLGRSVHAFIVTYGMLVDGFLG 406

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK----------- 370
            +L+D+YAKC   G +D++ + F+++   +  SW +++ G+ +SGG DK           
Sbjct: 407 NALLDLYAKC---GKLDEALRTFEQLPCKSAASWNSMLDGFCRSGGVDKARDFFNKIPEK 463

Query: 371 -------------------EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
                              E+ ++F  M    V P+  T  S+L +C  +   N    V 
Sbjct: 464 DIVSWNTMVNAYVKHDLFNESFEIFCKMQSSNVKPDKTTLISLLSSCAKVGALNHGIWVN 523

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            +  K    +D  +G +LI MY + G +E A + F  + EKN+  +  M+ AYA    + 
Sbjct: 524 VYIEKNEIGIDAMLGTALIDMYGKCGCVEMAYEIFTQIIEKNVFVWTAMMAAYAMEGQAL 583

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNA 529
           +A +L  E+E+ GV     TF +LL+  S  G + +G +   + ++S +     I  Y  
Sbjct: 584 EAIDLYLEMEERGVKPDHVTFIALLAACSHGGLVDEGYKYFNK-LRSFYNIIPTIHHYGC 642

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ++ +  R  ++E   +  + M  + +V  W+S++     H     A + F +++      
Sbjct: 643 MVDLLGRVGHLEETVKFIERMPIEPDVSIWSSLMRACRSHHNVELAEQAFKQLIEIDPTN 702

Query: 589 NG 590
           NG
Sbjct: 703 NG 704


>gi|359482590|ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Vitis vinifera]
          Length = 648

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 234/581 (40%), Positives = 350/581 (60%), Gaps = 5/581 (0%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P     + ++ +C   +    GKQLH+     G   D  +   LV++Y  C    S+  +
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCD---SLSSA 129

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R +FDR+  HN+  W  +I GY  +G  +  AV+L+  M    + P++FTF  VLKAC  
Sbjct: 130 RLLFDRIPKHNIFLWNVLIRGYAWNGPYEA-AVQLYYQMFDYGLVPDNFTFPFVLKACAA 188

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L       +++ H V+ G   D  VG +LI MYA+ G +  AR+ F+ +  ++ V +N+M
Sbjct: 189 LSAIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSM 248

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           + AY++N + +    L  E+  TG+  +  T  + +S ++   A+ +G ++H    +  F
Sbjct: 249 LAAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEF 308

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
           ES+  +  AL+ MY++C +V  A  +F+ +  + V+SW +MITG+A HG A  AL++F +
Sbjct: 309 ESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEE 368

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M     KP+ IT++ VLSACSH GL+ EGW  F +M  ++ I   ++HY CMVDLLG SG
Sbjct: 369 M-NRVAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGHSG 427

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            L EA   I  M +  D  VW   L +C++H + ELG+ A E ++E +P D   +++LSN
Sbjct: 428 RLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVILSN 487

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +YA AG WE VA +RK M +R L K   CSWIE  NKVH F  G+TSHP + EIY+EL++
Sbjct: 488 IYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSELER 547

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +   +KE GY P T  V H++E+++K   +  HSE++A+AFGLIST     + + KNLR+
Sbjct: 548 VGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNLRI 607

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           C DCH AIK+IS +T REI +RD NR+HH KDG CSC DYW
Sbjct: 608 CEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 120/372 (32%), Positives = 195/372 (52%), Gaps = 17/372 (4%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P    Y+ LL+SCI  +    GK +H+ +  +    ++VI   L++LY  C  L+ A  +
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSLSSARLL 132

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  +  K +I  W+ +I  Y   G    A+ ++ +M + G  P+ + F  V++AC+    
Sbjct: 133 FDRI-PKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSA 191

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+  +++ G+ + DV VG ALIDM+ K    + SA +VFDK+  ++ V W  M+
Sbjct: 192 IEHGREIHEHVVQTGW-EKDVFVGAALIDMYAKCGC-VGSAREVFDKILVRDAVLWNSML 249

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
              +Q G P   + L  +M+L+G  P   TL   +SA ++      G++LH  + R    
Sbjct: 250 AAYSQNGHPDACLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQEFE 309

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
               V  +LVDMYAKC   GSV  +R +F+R+    V+SW A+ITGY    G   EA+ L
Sbjct: 310 SHDKVKTALVDMYAKC---GSVRVARNLFERLGVKRVVSWNAMITGYAMH-GHATEALDL 365

Query: 376 FSDMIQGQVA-PNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLI 430
           F +M   +VA P+H TF  VL AC  G LL+      ++   + R   +D  V +   ++
Sbjct: 366 FEEM--NRVAKPDHITFVGVLSACSHGGLLEEG---WMFFETMIRDYKIDPTVQHYTCMV 420

Query: 431 SMYARSGRMEDA 442
            +   SGR+++A
Sbjct: 421 DLLGHSGRLDEA 432



 Score =  145 bits (366), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 181/375 (48%), Gaps = 8/375 (2%)

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P    +++++++C   + +  G  ++  +   G F  D  +   L++++      L SA 
Sbjct: 73  PTYSNYASLLQSCIARKAIKPGKQLHAQVCLAG-FGFDTVIATKLVNLYCVCD-SLSSAR 130

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
            +FD++ + N   W ++I      G    A++L+  M   G +PD FT   V+ AC+ L 
Sbjct: 131 LLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALS 190

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G+++H   ++TG   DV VG +L+DMYAKC   G V  +R+VFD++L  + + W +
Sbjct: 191 AIEHGREIHEHVVQTGWEKDVFVGAALIDMYAKC---GCVGSAREVFDKILVRDAVLWNS 247

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           ++  Y Q+G  D   + L S+M+   + P   T  + + A  +        +++  + ++
Sbjct: 248 MLAAYSQNGHPDA-CLSLCSEMVLTGLRPTEATLVTAISASADNAALPQGRELHGLSWRQ 306

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                D V  +L+ MYA+ G +  AR  FE L  K +VS+N M+  YA + ++ +A +L 
Sbjct: 307 EFESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLF 366

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSR 536
            E+          TF  +LS  S  G + +G      +I+    +     Y  ++ +   
Sbjct: 367 EEMNRVA-KPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGH 425

Query: 537 CANVEAAFQVFKEME 551
              ++ A+ +  +M+
Sbjct: 426 SGRLDEAYNLIMQMK 440



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 105/403 (26%), Positives = 179/403 (44%), Gaps = 50/403 (12%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  + A+     M   G  PD  T+  +LK+C        G+ +H  + ++  E +  +
Sbjct: 154 NGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKACAALSAIEHGREIHEHVVQTGWEKDVFV 213

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +LI +Y+KCG +  A ++F  +   RD V W+SM+++Y   G     + +  EM+  G
Sbjct: 214 GAALIDMYAKCGCVGSAREVFDKI-LVRDAVLWNSMLAAYSQNGHPDACLSLCSEMVLTG 272

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P E      I A ++   +  G  ++G   +   F+S   V  AL+DM+ K GSV + 
Sbjct: 273 LRPTEATLVTAISASADNAALPQGRELHGLSWR-QEFESHDKVKTALVDMYAKCGSVRV- 330

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +F+++  K  V W  MIT     G   +A+ LF +M      PD  T  GV+SACS
Sbjct: 331 -ARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFEEMNRVA-KPDHITFVGVLSACS 388

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              L   G       IR                                 D  +D  V  
Sbjct: 389 HGGLLEEGWMFFETMIR---------------------------------DYKIDPTVQH 415

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           +T ++     SG  D EA  L   ++Q +V P+   + ++L +C   + +NV  ++   A
Sbjct: 416 YTCMVDLLGHSGRLD-EAYNL---IMQMKVLPDSGVWGALLNSCK--IHANV--ELGEIA 467

Query: 415 VKRGRALD-DCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
           ++R   L+ D  GN +I  ++YA++G+ E   K  + + ++ L
Sbjct: 468 LERLIELEPDDAGNYVILSNIYAQAGKWEGVAKLRKLMTDRRL 510



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 50/192 (26%), Positives = 95/192 (49%), Gaps = 2/192 (1%)

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           E T +  +   +ASLL    +  AI  G+Q+HA++  +GF  +  I   L+++Y  C ++
Sbjct: 67  ESTCLTPTYSNYASLLQSCIARKAIKPGKQLHAQVCLAGFGFDTVIATKLVNLYCVCDSL 126

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
            +A  +F  +   N+  W  +I G+A +G    A++++Y+M   G+ P+  T+  VL AC
Sbjct: 127 SSARLLFDRIPKHNIFLWNVLIRGYAWNGPYEAAVQLYYQMFDYGLVPDNFTFPFVLKAC 186

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           +    I  G +       + G  + +   A ++D+  + G +  A E    + L  D ++
Sbjct: 187 AALSAIEHG-REIHEHVVQTGWEKDVFVGAALIDMYAKCGCVGSAREVFDKI-LVRDAVL 244

Query: 661 WRTFLGACRVHG 672
           W + L A   +G
Sbjct: 245 WNSMLAAYSQNG 256


>gi|357510605|ref|XP_003625591.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355500606|gb|AES81809.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/748 (34%), Positives = 421/748 (56%), Gaps = 10/748 (1%)

Query: 28  LPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLK 86
           + PS  P   +  +   P ++ +I+       ++A+   D   +  N H +  TY+ L+ 
Sbjct: 108 VKPSLQPAIFSNLSKELPTNSYIIFLCKQHHYKEALEAFDFHLKNSNSHFEPSTYTSLVL 167

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C   R+    K +H  + +S  +P+ ++ N +I++Y KCG + +A K+F +M    ++V
Sbjct: 168 ACANFRSLDYAKKIHDHVLKSNYQPSIILQNHMINMYGKCGSMKDARKVFDTM-QLPNVV 226

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW+SMIS Y   G+  DAI M+++M   G  P++  F +VI+AC    ++ +G  ++  +
Sbjct: 227 SWTSMISGYSQNGQANDAIIMYIQMTRSGQFPDQLTFGSVIKACYIAGDIDLGRQLHAHV 286

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           +K  +F   +    ALI M+      +E A  VF ++  K+ + W  MIT   QLG   +
Sbjct: 287 IK-SWFGHHLTSQNALISMYTNFG-QIEHASNVFTRIPTKDLISWGTMITGYIQLGYRVE 344

Query: 267 AIRLFLDMILSG-FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           A+ LF D++  G + P+ F    V SACS L     GKQ+H   ++ GL  +V  GCSL 
Sbjct: 345 ALYLFRDLLRQGTYQPNEFIFGSVFSACSSLLELEYGKQVHGMCVKFGLRRNVFAGCSLC 404

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DMYAK    G +  ++  F ++ + +++SW AII  +  +G  + EA+  F  MI   + 
Sbjct: 405 DMYAKF---GFLPSAKMAFCQIKNPDIVSWNAIIAAFADNGDAN-EAIDFFRQMIHIGLT 460

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+  T+ S+L  CG+ +  N   Q++++ VK G   +  V NSL++MY +   + DA   
Sbjct: 461 PDSITYISLLCTCGSPVRLNQGRQIHSYIVKIGFDKEITVCNSLLTMYTKCSHLHDALNV 520

Query: 446 FESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
           F  +    NLVS+N ++ A  +     + F L  E+  +G    + T  +LL   + + +
Sbjct: 521 FRDISRNANLVSWNAILSACLQKKQEGETFRLYKEMHFSGNKPDSITITTLLGTCAELTS 580

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           +G G Q+H   IKSG   +  + N LI MY++C +++ A  VF   ++ +++SW+S+I G
Sbjct: 581 LGVGNQVHCYSIKSGLILDVSVCNGLIDMYAKCGSLKHARDVFDSTQNLDIVSWSSLIVG 640

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +A+ G    AL +F  M   G++PN +TY+  LSACSH GL+ EGW+ ++SM  EHGI  
Sbjct: 641 YAQCGLGHEALNLFRIMTNLGVQPNEVTYLGALSACSHIGLVEEGWRLYKSMETEHGIPP 700

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
             EH++C+VDLL R+G L EA  FI+   L AD+  W+T L AC+ H + ++ +  A  I
Sbjct: 701 TREHFSCIVDLLARAGCLHEAETFIQKSGLDADITAWKTLLAACKTHNNVDIAERGAGNI 760

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
           L+ DP + AA ++L N++ASAG+WE VA +RK MK+  + K  G SWIE  +K H F   
Sbjct: 761 LKLDPSNSAAMVMLCNIHASAGNWEEVAKLRKLMKQMGVQKVPGQSWIEVKDKFHIFFSE 820

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLP 772
           ++SHP+   IY  L++L  ++ + GY P
Sbjct: 821 DSSHPQRNLIYTMLEELWSQVLDDGYDP 848


>gi|414885035|tpg|DAA61049.1| TPA: hypothetical protein ZEAMMB73_995105 [Zea mays]
          Length = 824

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 298/863 (34%), Positives = 447/863 (51%), Gaps = 116/863 (13%)

Query: 13  PPPSSFKPSN-PSRQ----------NLPPSSSPPFI-AQPTTSEPLSNRLIY-HLNDGRV 59
           P P   KP   PSR             PP+ +   I  +P       NR I  H+  GRV
Sbjct: 64  PEPQFGKPPMLPSRHLRAAARQRSHRRPPAPADACITGKPDMEVIRRNRAITAHMRAGRV 123

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSL-LTRSKLEPNSVILNS 118
             A      M ++       TY+ +L     +     G+L  +L   RS   P+S   N+
Sbjct: 124 PDAERLFAAMPRRST----STYNTMLAGYAAN-----GRLPQALSFFRSIPRPDSFSYNT 174

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+        L +   +F  M  K D VS++ MISS+ N G    A H F    E     
Sbjct: 175 LLHALGVSSSLADVRALFDEMPVK-DSVSYNVMISSHANHGLVSLARHYFDLAPEKDAVS 233

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
                +A +R          G I     L     + D     AL+  +V+ S  +E A K
Sbjct: 234 WNGMLAAYVRN---------GRIQEARELFDSRTEWDAISWNALMAGYVQRS-QIEEAQK 283

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +F+KM +++ V W  M++   + G   +A RL             F ++ +         
Sbjct: 284 MFNKMPQRDVVSWNTMVSGYARRGDMAEARRL-------------FDVAPI--------- 321

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
                             DV    ++V  YA+   +G ++++++VFD M D N +SW A+
Sbjct: 322 -----------------RDVFTWTAIVSGYAQ---NGMLEEAKRVFDAMPDKNAVSWNAM 361

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           +  YVQ    + EA +LF  M                  C N+                 
Sbjct: 362 MAAYVQRRMME-EAKELFDAM-----------------PCRNV----------------- 386

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
                   N++++ YA++G +++AR  F  + +K+ VS+  M+ AY++   SE+  +L  
Sbjct: 387 -----ASWNTMLTGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFK 441

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           E+   G   +   FA +LS  + I A+  G Q+H+R+IK+G+     + NAL++MY +C 
Sbjct: 442 EMGRCGEWVNRSAFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKCG 501

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           ++E A   F+EME+R+V+SW +MI G+A+HGF   ALE+F  M     KP+ IT + VL+
Sbjct: 502 SMEEAHSAFEEMEERDVVSWNTMIAGYARHGFGKEALEVFDTMRKTSTKPDDITLVGVLA 561

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSH+GL+ +G  +F SM+ + G+  + EHY CM+DLLGR+G L EA+  ++ MP   D 
Sbjct: 562 ACSHSGLVEKGISYFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDS 621

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
            +W   LGA R+H ++ELG++AAE I E +P++   ++LLSN+YAS+G W  V  +R  M
Sbjct: 622 TMWGALLGASRIHRNSELGRNAAEKIFELEPENAGMYVLLSNIYASSGKWRDVDKMRHIM 681

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
            ER + K  G SWIE  NKVH F VG++ HP+  +IYA L+ L +++K+ GY+  T+ VL
Sbjct: 682 HERGVKKVPGFSWIEVQNKVHTFSVGDSVHPEREDIYAFLEDLDIRMKKAGYVSATDMVL 741

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H++EEE+K   L  HSEK+AVA+G++     +PIRV KNLRVC DCHTA K IS + GR 
Sbjct: 742 HDVEEEEKEHMLKYHSEKLAVAYGILKIPPGRPIRVIKNLRVCRDCHTAFKCISAIEGRL 801

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I+LRDSNRFHH +DG CSC DYW
Sbjct: 802 IILRDSNRFHHFRDGSCSCGDYW 824



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 132/510 (25%), Positives = 233/510 (45%), Gaps = 52/510 (10%)

Query: 12  IPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIY------HLNDGRVQKAIFT 65
           IP P SF   N     L  SSS   +       P+ + + Y      H N G V  A   
Sbjct: 164 IPRPDSFS-YNTLLHALGVSSSLADVRALFDEMPVKDSVSYNVMISSHANHGLVSLARHY 222

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
            DL  +K    D  +++ +L + +R+      +     L  S+ E +++  N+L++ Y +
Sbjct: 223 FDLAPEK----DAVSWNGMLAAYVRNGRIQEARE----LFDSRTEWDAISWNALMAGYVQ 274

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF----------VEMLELG 175
              + EA K+F  M  +RD+VSW++M+S Y  RG   +A  +F             +  G
Sbjct: 275 RSQIEEAQKMFNKM-PQRDVVSWNTMVSGYARRGDMAEARRLFDVAPIRDVFTWTAIVSG 333

Query: 176 FCPNEYCFSA--VIRACSNTENVAIGHIIYGFLLK------CGYFDSDVCVGCALIDMFV 227
           +  N     A  V  A  +   V+   ++  ++ +         FD+  C   A  +  +
Sbjct: 334 YAQNGMLEEAKRVFDAMPDKNAVSWNAMMAAYVQRRMMEEAKELFDAMPCRNVASWNTML 393

Query: 228 KGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            G      L+ A  +F  M +K+ V W  M+   +Q+G   + ++LF +M   G   +R 
Sbjct: 394 TGYAQAGMLDEARAIFGMMPQKDAVSWAAMLAAYSQIGFSEETLQLFKEMGRCGEWVNRS 453

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
             + V+S C+++     G QLHS  I+ G  +   VG +L+ MY KC   GS++++   F
Sbjct: 454 AFACVLSTCADIAALECGMQLHSRLIKAGYGVGCFVGNALLAMYFKC---GSMEEAHSAF 510

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LL 402
           + M + +V+SW  +I GY + G   KEA+++F  M +    P+  T   VL AC +  L+
Sbjct: 511 EEMEERDVVSWNTMIAGYARHGF-GKEALEVFDTMRKTSTKPDDITLVGVLAACSHSGLV 569

Query: 403 DSNVAEQVYTHAVKR--GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNT 459
           +  ++   Y +++ R  G A        +I +  R+GR+++A    + + FE +   +  
Sbjct: 570 EKGIS---YFYSMHRDFGVATKPEHYTCMIDLLGRAGRLDEAVNLMKDMPFEPDSTMWGA 626

Query: 460 MVDAYAKNLNSE---KAFELLHEIEDTGVG 486
           ++ A   + NSE    A E + E+E    G
Sbjct: 627 LLGASRIHRNSELGRNAAEKIFELEPENAG 656


>gi|224116778|ref|XP_002331875.1| predicted protein [Populus trichocarpa]
 gi|222875393|gb|EEF12524.1| predicted protein [Populus trichocarpa]
          Length = 675

 Score =  476 bits (1225), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 248/638 (38%), Positives = 372/638 (58%), Gaps = 46/638 (7%)

Query: 227 VKGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           +KG +D   L  A ++FD+M EKN + WT M+    + G    A RLFLDM +       
Sbjct: 81  IKGCLDCGNLGMATRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDMHVK------ 134

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
                                            DV    ++V  Y +   +G V++  ++
Sbjct: 135 ---------------------------------DVAAWNAMVHGYFE---NGRVEEGVRL 158

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F+ M   +V+SWT++I G +   G+ +EA+ +F  M++  V P   TFA VL AC N ++
Sbjct: 159 FEEMPVRDVISWTSMIGG-LDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVE 217

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
            N+  QV+ H VK G    + +  SLI+ YA   ++E A K F     KN+V +  ++ A
Sbjct: 218 FNLGVQVHGHVVKLGCFFHEFISVSLITFYANCMKIEHAHKIFNETLTKNVVKWTALLTA 277

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           Y  N   + A  +  ++   G   +  TF+  L     + A+ KG++IH   IK G E++
Sbjct: 278 YVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLGLETD 337

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
             + N+L+ MY+ C NV +A  VF+ + +++++SW S+I G A+HGF   AL  F +M+ 
Sbjct: 338 VFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIR 397

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
            G+ PN IT+  +LSACS +G++ +G   F  +      V R +HYACMVD+LGR G L 
Sbjct: 398 RGVDPNEITFTGLLSACSRSGMLLKGRCFFEYISRYKSNVLRPQHYACMVDILGRCGKLD 457

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           EA E +R MP+ A+ ++W   L ACRVH + E+ + AA+ IL+ +P   +A++LLSN+YA
Sbjct: 458 EAEELVRYMPVKANSMIWLALLSACRVHSNLEVAERAAKHILDLEPNCSSAYVLLSNIYA 517

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
           SAG W  V+ +R +MK+  L+K+ G SW+    K H+F   + SHP +  IY +LD L  
Sbjct: 518 SAGRWADVSRMRVKMKQGGLVKQPGSSWVVLRGKKHEFLSADRSHPLSERIYEKLDWLGK 577

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           K+KEFGY+PD  F LH++E+EQK + L  HSE++A+AFGL+ST +   I V KNLRVCGD
Sbjct: 578 KLKEFGYVPDQKFALHDVEDEQKEEMLSFHSERLAIAFGLVSTVEGSTITVMKNLRVCGD 637

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH+ IK +S + GR+IV+RDS RFHH K+G CSC+DYW
Sbjct: 638 CHSVIKLMSKIVGRKIVVRDSGRFHHFKNGICSCSDYW 675



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 128/464 (27%), Positives = 227/464 (48%), Gaps = 25/464 (5%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           PN  +   +I+ Y++   L +A K+F  M + RD+VSW+SMI   ++ G    A  +F E
Sbjct: 41  PNLHLYTKMIAGYTRNDRLCDALKLFDRM-SVRDVVSWNSMIKGCLDCGNLGMATRLFDE 99

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M E     N   ++ ++        +  G +     L       DV    A++  + +  
Sbjct: 100 MPE----KNVISWTTMVNG-----YLKFGRVELAQRLFLDMHVKDVAAWNAMVHGYFENG 150

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +E   ++F++M  ++ + WT MI      G   +A+ +F  M+ SG  P   T + V+
Sbjct: 151 -RVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVL 209

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SAC+    F  G Q+H   ++ G      +  SL+  YA C     ++ + K+F+  L  
Sbjct: 210 SACANAVEFNLGVQVHGHVVKLGCFFHEFISVSLITFYANCM---KIEHAHKIFNETLTK 266

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           NV+ WTA++T YV +  + ++A+++F DM +    PN  TF+  LKAC  L   +  +++
Sbjct: 267 NVVKWTALLTAYVWN-NKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEI 325

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +T A+K G   D  VGNSL+ MY   G +  A   F ++ EK++VS+N+++   A++   
Sbjct: 326 HTMAIKLGLETDVFVGNSLVVMYTECGNVNSAVAVFRNINEKDIVSWNSIIVGSAQHGFG 385

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN-----HC 525
             A    +++   GV  +  TF  LLS  S  G + KG      I  S ++SN     H 
Sbjct: 386 LWALIFFNQMIRRGVDPNEITFTGLLSACSRSGMLLKGRCFFEYI--SRYKSNVLRPQH- 442

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
            Y  ++ +  RC  ++ A ++ + M  + N + W ++++    H
Sbjct: 443 -YACMVDILGRCGKLDEAEELVRYMPVKANSMIWLALLSACRVH 485



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 192/392 (48%), Gaps = 49/392 (12%)

Query: 40  PTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG 97
           P+ +  L  ++I  Y  ND R+  A+   D M+ +    D+ +++ ++K C+   N  + 
Sbjct: 39  PSPNLHLYTKMIAGYTRND-RLCDALKLFDRMSVR----DVVSWNSMIKGCLDCGNLGMA 93

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
               + L     E N +   ++++ Y K G +  A ++F  M + +D+ +W++M+  Y  
Sbjct: 94  ----TRLFDEMPEKNVISWTTMVNGYLKFGRVELAQRLFLDM-HVKDVAAWNAMVHGYFE 148

Query: 158 -------------------------------RGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
                                           GK  +A+ +F +ML  G  P    F+ V
Sbjct: 149 NGRVEEGVRLFEEMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACV 208

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           + AC+N     +G  ++G ++K G F  +  +  +LI  F    + +E A+K+F++   K
Sbjct: 209 LSACANAVEFNLGVQVHGHVVKLGCFFHEF-ISVSLIT-FYANCMKIEHAHKIFNETLTK 266

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           N V WT ++T        +DA+R+F DM   G LP++ T S  + AC  LE    GK++H
Sbjct: 267 NVVKWTALLTAYVWNNKHQDALRVFGDMTKMGALPNQSTFSITLKACCGLEALDKGKEIH 326

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           + AI+ GL  DV VG SLV MY +C   G+V+ +  VF  + + +++SW +II G  Q  
Sbjct: 327 TMAIKLGLETDVFVGNSLVVMYTEC---GNVNSAVAVFRNINEKDIVSWNSIIVGSAQH- 382

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           G    A+  F+ MI+  V PN  TF  +L AC
Sbjct: 383 GFGLWALIFFNQMIRRGVDPNEITFTGLLSAC 414



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 90/310 (29%), Positives = 161/310 (51%), Gaps = 12/310 (3%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+ ++A+F    M + G  P   T++ +L +C  +  F+LG  VH  + +     +  I
Sbjct: 180 NGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANAVEFNLGVQVHGHVVKLGCFFHEFI 239

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             SLI+ Y+ C  +  A+KIF     K ++V W++++++YV   K  DA+ +F +M ++G
Sbjct: 240 SVSLITFYANCMKIEHAHKIFNETLTK-NVVKWTALLTAYVWNNKHQDALRVFGDMTKMG 298

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             PN+  FS  ++AC   E +  G  I+   +K G  ++DV VG +L+ M+ + G+V+  
Sbjct: 299 ALPNQSTFSITLKACCGLEALDKGKEIHTMAIKLG-LETDVFVGNSLVVMYTECGNVN-- 355

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           SA  VF  + EK+ V W  +I    Q G    A+  F  MI  G  P+  T +G++SACS
Sbjct: 356 SAVAVFRNINEKDIVSWNSIIVGSAQHGFGLWALIFFNQMIRRGVDPNEITFTGLLSACS 415

Query: 295 ELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHN 351
              +   G+    +  R  + +       C +VD+  +C   G +D++ ++   M +  N
Sbjct: 416 RSGMLLKGRCFFEYISRYKSNVLRPQHYAC-MVDILGRC---GKLDEAEELVRYMPVKAN 471

Query: 352 VMSWTAIITG 361
            M W A+++ 
Sbjct: 472 SMIWLALLSA 481



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/175 (30%), Positives = 94/175 (53%), Gaps = 8/175 (4%)

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           +I+ Y R+ R+ DA K F+ +  +++VS+N+M+       N   A  L  E+ +  V   
Sbjct: 49  MIAGYTRNDRLCDALKLFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEMPEKNV--- 105

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             ++ ++++G    G +    ++  R+       +   +NA++  Y     VE   ++F+
Sbjct: 106 -ISWTTMVNGYLKFGRV----ELAQRLFLDMHVKDVAAWNAMVHGYFENGRVEEGVRLFE 160

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
           EM  R+VISWTSMI G   +G +  AL +F KML  G++P   T+  VLSAC++A
Sbjct: 161 EMPVRDVISWTSMIGGLDLNGKSEEALFVFKKMLRSGVEPTWSTFACVLSACANA 215



 Score = 55.5 bits (132), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 48/190 (25%), Positives = 88/190 (46%), Gaps = 12/190 (6%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQI-HARIIKSGFES-NHCIYNALISMYSRCANVEAAFQ 545
           + YT    LS  +S+    K +++  AR+I     S N  +Y  +I+ Y+R   +  A +
Sbjct: 5   TRYTRTITLSYTTSLANHLKNQRLDQARLIFDKIPSPNLHLYTKMIAGYTRNDRLCDALK 64

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F  M  R+V+SW SMI G    G    A  +F +M     + N I++  +++     G 
Sbjct: 65  LFDRMSVRDVVSWNSMIKGCLDCGNLGMATRLFDEM----PEKNVISWTTMVNGYLKFGR 120

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           +    + F  M+     V+ +  +  MV     +G + E +     MP+  DV+ W + +
Sbjct: 121 VELAQRLFLDMH-----VKDVAAWNAMVHGYFENGRVEEGVRLFEEMPVR-DVISWTSMI 174

Query: 666 GACRVHGDTE 675
           G   ++G +E
Sbjct: 175 GGLDLNGKSE 184


>gi|449447749|ref|XP_004141630.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Cucumis sativus]
          Length = 746

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 272/746 (36%), Positives = 423/746 (56%), Gaps = 21/746 (2%)

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KCGD   A+K+F  M +K +IV+++S+IS YV        + +F +   LG   ++Y  +
Sbjct: 13  KCGDTRSADKLFDKM-SKSNIVTYNSLISGYVQMSNLDKVMILFDKARRLGLKLDKYNCA 71

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKM 243
             + ACS + N++ G +I+G +L  G   S V +  +LIDM+ K G VD   A  +FD  
Sbjct: 72  GALTACSQSGNLSAGKMIHGLILVYG-LGSQVVLTNSLIDMYSKCGQVDY--ARILFDHS 128

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE----LELF 299
            + + V W  +I    Q G   + + +   M  +G   + +TL   + ACS      ++F
Sbjct: 129 DKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFNGCKMF 188

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G  LH  AI+ GL LDV VG +L+DMYAK    GS+DD+ ++FD+M+D NV+ + A++
Sbjct: 189 --GTMLHDHAIKLGLHLDVVVGTALLDMYAK---TGSLDDAIQIFDQMVDKNVVMYNAMM 243

Query: 360 TGYVQSGG-RDK---EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            G +Q     DK   +A+ LF +M    + P+ FT++S+LKAC  + D   A+QV+    
Sbjct: 244 AGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMC 303

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K G   D+ +G+ LI +Y+  G M DA   F S+    +V    M+  Y +N   E A  
Sbjct: 304 KNGLLSDEYIGSILIDLYSVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQNGEFESALS 363

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L +E+         + F++++S  +++G +  GEQI     K G        N+ I MY+
Sbjct: 364 LFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQNSQIWMYA 423

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +  ++ AA   F++ME+ +++SW++MI   A+HG A  AL  F  M + GI+PN   ++ 
Sbjct: 424 KSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLG 483

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VL ACSH GL+ EG ++F +M  ++ +   ++H  C+VDLLGR+G L +A   I  +   
Sbjct: 484 VLIACSHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCVVDLLGRAGRLADAESLILRLGFE 543

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            + ++WR  L ACR+H DT   +  A+ ++E +P   A+++LL N+Y  AG+    + +R
Sbjct: 544 HEPVMWRALLSACRIHKDTVTAQRVAQKVIELEPLASASYVLLYNIYMDAGNKLAASKVR 603

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             M+ER + KE G SWI+  +KV+ F  G+ SH  + +IYA+LD++    K      D  
Sbjct: 604 TLMEERRIKKEPGLSWIQIGDKVYSFVSGDRSHKNSGQIYAKLDEMLATTKRLDSAKDIL 663

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
               E E    V Y   HSEK+AVAFG++  S+S P+RV KNLR+C DCH  +K  S+V 
Sbjct: 664 GYKIEHEHLTNVNY---HSEKLAVAFGVLYLSESAPVRVMKNLRICLDCHMTMKLFSIVE 720

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            RE+++RDS RFHH KDG CSC DYW
Sbjct: 721 KRELIVRDSVRFHHFKDGSCSCGDYW 746



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/441 (31%), Positives = 236/441 (53%), Gaps = 18/441 (4%)

Query: 78  LDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           LD Y+    L +C +S N   GK++H L+    L    V+ NSLI +YSKCG ++ A  +
Sbjct: 65  LDKYNCAGALTACSQSGNLSAGKMIHGLILVYGLGSQVVLTNSLIDMYSKCGQVDYARIL 124

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F    +K D VSW+S+I+ YV  GK  + + +  +M + G   N Y   + ++ACS+  N
Sbjct: 125 FDH-SDKLDGVSWNSLIAGYVQNGKYEELLTILQKMHQNGLAFNTYTLGSALKACSSNFN 183

Query: 196 --VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWT 252
                G +++   +K G    DV VG AL+DM+ K GS+D   A ++FD+M +KN V + 
Sbjct: 184 GCKMFGTMLHDHAIKLG-LHLDVVVGTALLDMYAKTGSLD--DAIQIFDQMVDKNVVMYN 240

Query: 253 LMITRCTQL-----GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            M+    Q       C   A+ LF +M   G  P  FT S ++ AC  +E F   KQ+H+
Sbjct: 241 AMMAGLLQQETIEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHA 300

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
              + GL  D  +G  L+D+Y   +V GS+ D+   F+ + +  ++  TA+I GY+Q+ G
Sbjct: 301 LMCKNGLLSDEYIGSILIDLY---SVLGSMMDALLCFNSIHNLTIVPMTAMIFGYLQN-G 356

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             + A+ LF +++  +  P+ F F++++ +C N+      EQ+  HA K G +      N
Sbjct: 357 EFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQN 416

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           S I MYA+SG +  A   F+ +   ++VS++TM+ + A++ ++ +A      ++  G+  
Sbjct: 417 SQIWMYAKSGDLYAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEP 476

Query: 488 SAYTFASLLSGASSIGAIGKG 508
           + + F  +L   S  G + +G
Sbjct: 477 NHFAFLGVLIACSHRGLVEEG 497



 Score =  109 bits (272), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 147/314 (46%), Gaps = 16/314 (5%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + D    KA+     M   G  P + TYS LLK+CI   +F   K VH+L+ ++ L  + 
Sbjct: 252 IEDKCAYKALNLFFEMKSCGIKPSMFTYSSLLKACIIVEDFKFAKQVHALMCKNGLLSDE 311

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I + LI LYS  G + +A   F S+ N   IV  ++MI  Y+  G+   A+ +F E+L 
Sbjct: 312 YIGSILIDLYSVLGSMMDALLCFNSIHN-LTIVPMTAMIFGYLQNGEFESALSLFYELLT 370

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
               P+E+ FS ++ +C+N   +  G  I G   K G     +    + I M+ K S DL
Sbjct: 371 YEEKPDEFIFSTIMSSCANMGMLRSGEQIQGHATKVGISRFTIFQN-SQIWMYAK-SGDL 428

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            +A   F +M   + V W+ MI    Q G   +A+R F  M   G  P+ F   GV+ AC
Sbjct: 429 YAANLTFQQMENPDIVSWSTMICSNAQHGHAMEALRFFELMKSCGIEPNHFAFLGVLIAC 488

Query: 294 SELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM- 347
           S   L   G +        + ++  +   VCV    VD+  +    G + D+  +  R+ 
Sbjct: 489 SHRGLVEEGLRYFDTMEKDYKMKLHVKHCVCV----VDLLGRA---GRLADAESLILRLG 541

Query: 348 LDHNVMSWTAIITG 361
            +H  + W A+++ 
Sbjct: 542 FEHEPVMWRALLSA 555



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 1/151 (0%)

Query: 42  TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH 101
           T  P++  +  +L +G  + A+     +      PD   +S ++ SC        G+ + 
Sbjct: 341 TIVPMTAMIFGYLQNGEFESALSLFYELLTYEEKPDEFIFSTIMSSCANMGMLRSGEQIQ 400

Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQ 161
              T+  +   ++  NS I +Y+K GDL  AN  F+ M N  DIVSWS+MI S    G  
Sbjct: 401 GHATKVGISRFTIFQNSQIWMYAKSGDLYAANLTFQQMENP-DIVSWSTMICSNAQHGHA 459

Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
           ++A+  F  M   G  PN + F  V+ ACS+
Sbjct: 460 MEALRFFELMKSCGIEPNHFAFLGVLIACSH 490


>gi|147834283|emb|CAN67492.1| hypothetical protein VITISV_035978 [Vitis vinifera]
          Length = 814

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 262/771 (33%), Positives = 427/771 (55%), Gaps = 74/771 (9%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S + + C   +    GK  H+ +  ++ +P   + N LI +Y KC DL  A K+F  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKVFDGM 103

Query: 140 GNKRDIVSWSSMISSYVNRG------KQVDA--------IHMF-VEMLELGFCPNEYCFS 184
             +RD VSW++M+  Y  RG      K  DA        + +F   M  +G   +   F+
Sbjct: 104 -PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTGCGVVELFDFRMGRMGTVFDRTTFA 162

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV---DLESAYKVFD 241
            V+++CS+ E+   G  I+G  +K G FD DV  G AL+DM+ K  V   DL    ++F 
Sbjct: 163 VVLKSCSSLEDHGGGIQIHGLAVKMG-FDCDVVTGSALLDMYAKCCVQNDDLRGGLELFK 221

Query: 242 KMTEKNTVGWTL---------------------MITRCTQL------------------- 261
           +M +       L                     M  +C  L                   
Sbjct: 222 EMQKAGVGALQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDCSNQLFNSLPNHNLQSY 281

Query: 262 -----GCPR-----DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
                G  R     +A+ +F  +  SG   D  +LSG   AC+ ++    G Q+H  +++
Sbjct: 282 NAIIVGYARSDKGIEALGMFRLLQKSGLGLDEVSLSGAXRACAVIKGDLEGLQVHGLSMK 341

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
           +    ++CV  +++DMY KC   G++ ++  VF+ M+  + +SW AII  + Q+G  +K 
Sbjct: 342 SLCQSNICVANAILDMYGKC---GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK- 397

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            + LF  M+Q  + P+ FT+ SVLKAC      N   +++   +K    LD  VG +LI 
Sbjct: 398 TLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHNRIIKSRMGLDSFVGIALID 457

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY++ G ME A K  + L E+ +VS+N ++  ++    SE+A +   ++ + GV    +T
Sbjct: 458 MYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFT 517

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           +A++L   +++  +  G+QIHA+IIK   +S+  I + L+ MYS+C N++    +F++  
Sbjct: 518 YATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAP 577

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           +R+ ++W +M+ G+A+HG    AL+IF  M  + +KPN  T++AVL AC H GL+ +G  
Sbjct: 578 NRDFVTWNAMVCGYAQHGLGEEALKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLH 637

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           +F SM   +G+  ++EHY+C+VD++GRSG +++ALE I  MP  AD ++WRT L  C++H
Sbjct: 638 YFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVSKALELIEGMPFEADAVIWRTLLSXCKIH 697

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
           G+ E+ + AA  IL+ +P+D AA++LLSN+YA+AG W  V  +RK M+   L KE GCSW
Sbjct: 698 GNVEVAEKAAYSILQLEPEDSAAYVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSW 757

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           IE  ++VH F VG+ +HP++ EIY  LD L  ++K  GY+PDT+F+L++ E
Sbjct: 758 IEIKSEVHAFLVGDKAHPRSKEIYENLDVLTDEMKWVGYMPDTDFILNDDE 808



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 240/454 (52%), Gaps = 18/454 (3%)

Query: 27  NLPPSSSPPFIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLL 84
           NL   S+  F + P  +    N +I  Y  +D  ++ A+    L+ + G   D  + S  
Sbjct: 261 NLSDCSNQLFNSLPNHNLQSYNAIIVGYARSDKGIE-ALGMFRLLQKSGLGLDEVSLSGA 319

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
            ++C   +    G  VH L  +S  + N  + N+++ +Y KCG L EA  +F+ M + RD
Sbjct: 320 XRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVS-RD 378

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
            VSW+++I+++   G +   + +FV ML+ G  P+E+ + +V++AC+  + +  G  I+ 
Sbjct: 379 AVSWNAIIAAHEQNGNEEKTLSLFVWMLQSGMEPDEFTYGSVLKACAGWQALNCGMEIHN 438

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
            ++K      D  VG ALIDM+ K  + +E A K+ D++ E+  V W  +I+  +     
Sbjct: 439 RIIK-SRMGLDSFVGIALIDMYSKCGM-MEKAEKLHDRLAEQTVVSWNAIISGFSLQKQS 496

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            +A + F  M+  G  PD FT + ++  C+ L     GKQ+H+  I+  L  D  +  +L
Sbjct: 497 EEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKELQSDAYISSTL 556

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           VDMY+KC   G++ D + +F++  + + ++W A++ GY Q  G  +EA+K+F  M    V
Sbjct: 557 VDMYSKC---GNMQDFQLIFEKAPNRDFVTWNAMVCGYAQH-GLGEEALKIFEYMQLENV 612

Query: 385 APNHFTFASVLKACGNLLDSNVAEQV--YTHAVKRGRALDDCVG--NSLISMYARSGRME 440
            PNH TF +VL+ACG++    + E+   Y H++     LD  +   + ++ +  RSG++ 
Sbjct: 613 KPNHATFLAVLRACGHM---GLVEKGLHYFHSMLSNYGLDPQLEHYSCVVDIMGRSGQVS 669

Query: 441 DARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKA 473
            A +  E + FE + V + T++     + N E A
Sbjct: 670 KALELIEGMPFEADAVIWRTLLSXCKIHGNVEVA 703



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 34/99 (34%), Positives = 54/99 (54%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T   TF+ +    S   A+  G+Q HAR+I + F+    + N LI MY +C+++  AF+V
Sbjct: 40  TKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLGFAFKV 99

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           F  M  R+ +SW +M+ G+A  G    A ++F  M   G
Sbjct: 100 FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPGTG 138


>gi|225451187|ref|XP_002271063.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 805

 Score =  476 bits (1224), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 260/785 (33%), Positives = 433/785 (55%), Gaps = 20/785 (2%)

Query: 82  SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
           SLL +S   S+N    K  H+ +  + L  +  +   L+  YS    L  A  +F     
Sbjct: 36  SLLRES---SKNLIWVKSTHAQIITNSLSTDQFVATKLVKAYSDLRSLEAARYVFDQFFQ 92

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEM----LELGFCPNEYCFSAVIRACSNTENVA 197
            + ++  ++M+  Y+  G+  + + +F  M    LE+  C   +     ++AC+++ +  
Sbjct: 93  PKGLLC-NAMLCGYLQSGRYRETLELFGLMRSRNLEVDSCSCTF----ALKACASSLDYE 147

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +G  I    ++ G  + +  VG ++I   VK    +  A +VFD M  K+ V W  +I  
Sbjct: 148 MGMEIISSAVEKG-MEKNRFVGSSMISFLVKFG-KIGEAQRVFDGMPNKDVVCWNSIIGG 205

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q GC   A +LF +M  SG  P   T++ ++ AC  +     GK +H + +  GL  D
Sbjct: 206 YVQAGCFDVAFQLFFEMHGSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLGLGND 265

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           + V  S VDMY+K    G ++ +R VF +M   N++SW A+I+G V++G    E+  LF 
Sbjct: 266 ILVLTSFVDMYSKM---GDIESARWVFYKMPTRNLVSWNAMISGCVRNG-LVGESFDLFH 321

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            +++     +  T  S+L+ C         + ++  A++   + +  +  +++ +Y++ G
Sbjct: 322 RLVRSSGGFDLTTIVSLLQGCSQTASLATGKILHGCAIRSFES-NLILSTAIVDLYSKCG 380

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++ A   F  + ++N++++  M+   A+N ++E A  L  ++++ G+  ++ TF SL+ 
Sbjct: 381 SLKQATFVFNRMKDRNVITWTAMLVGLAQNGHAEDALRLFAQMQEEGIAANSVTFVSLVH 440

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
             + +G++ +G  IH  + + GF  +     AL+ MY++C  +  A ++F      ++V+
Sbjct: 441 SCAHLGSLKRGRSIHGHLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVV 500

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
            W SMITG+  HG   +A+ I++KM+ +G+KPN  T++++LSACSH+ L+ +G   F SM
Sbjct: 501 LWNSMITGYGMHGHGYQAVGIYHKMIEEGLKPNQTTFLSLLSACSHSRLVEQGISLFNSM 560

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +H I    +HYAC+VDLL R+G   EA   I  MP      V    L  CR H +  L
Sbjct: 561 ERDHNIRPIEKHYACLVDLLSRAGRFEEAQALIEKMPFQPGTAVLEALLSGCRTHKNINL 620

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
           G   ++ +L  D  +P  +I+LSN+YA A  W+ V  IR  M+ R L K  G S +E  N
Sbjct: 621 GIQTSDKLLALDAMNPGIYIMLSNIYAEARRWDKVDYIRGLMRNRGLKKTPGYSLVETGN 680

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
            VH F  G+ SHP   EIY  L+ L   ++  GY+PDT+ VL +++EE KV+ L+ HSE+
Sbjct: 681 WVHTFFAGDNSHPNWEEIYHFLESLRSAVETSGYVPDTSCVLRDVDEEMKVRMLWGHSER 740

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +A+AFGL++T     IR+ KNLRVCGDCHT  KYIS +  REI++RD+NRFHH  +G+CS
Sbjct: 741 LAIAFGLLTTPAGSLIRITKNLRVCGDCHTVTKYISKIVKREIIVRDANRFHHFSNGECS 800

Query: 857 CNDYW 861
           C DYW
Sbjct: 801 CGDYW 805



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 151/511 (29%), Positives = 263/511 (51%), Gaps = 32/511 (6%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L  GR ++ +    LM  +    D  + +  LK+C  S ++ +G  + S      +E N
Sbjct: 105 YLQSGRYRETLELFGLMRSRNLEVDSCSCTFALKACASSLDYEMGMEIISSAVEKGMEKN 164

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + +S+IS   K G + EA ++F  M NK D+V W+S+I  YV  G    A  +F EM 
Sbjct: 165 RFVGSSMISFLVKFGKIGEAQRVFDGMPNK-DVVCWNSIIGGYVQAGCFDVAFQLFFEMH 223

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+    +++I+AC    N+ +G  ++G++L  G   +D+ V  + +DM+ K   D
Sbjct: 224 GSGIKPSPITMTSLIQACGGIGNLKLGKCMHGYVLGLG-LGNDILVLTSFVDMYSKMG-D 281

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +ESA  VF KM  +N V W  MI+ C + G   ++  LF  ++ S    D  T+  ++  
Sbjct: 282 IESARWVFYKMPTRNLVSWNAMISGCVRNGLVGESFDLFHRLVRSSGGFDLTTIVSLLQG 341

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS+     +GK LH  AIR+    ++ +  ++VD+Y+KC   GS+  +  VF+RM D NV
Sbjct: 342 CSQTASLATGKILHGCAIRS-FESNLILSTAIVDLYSKC---GSLKQATFVFNRMKDRNV 397

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++WTA++ G  Q+ G  ++A++LF+ M +  +A N  TF S++ +C +L        ++ 
Sbjct: 398 ITWTAMLVGLAQN-GHAEDALRLFAQMQEEGIAANSVTFVSLVHSCAHLGSLKRGRSIHG 456

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAF-ESLFEKNLVSYNTMVDAYAKNLNSE 471
           H  + G A D     +L+ MYA+ G++  A + F      K++V +N+M+  Y  + +  
Sbjct: 457 HLFRLGFAFDIVNMTALVDMYAKCGKINLAERIFSHGSISKDVVLWNSMITGYGMHGHGY 516

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG------FESNHC 525
           +A  + H++ + G+  +  TF SLLS  S           H+R+++ G       E +H 
Sbjct: 517 QAVGIYHKMIEEGLKPNQTTFLSLLSACS-----------HSRLVEQGISLFNSMERDHN 565

Query: 526 I------YNALISMYSRCANVEAAFQVFKEM 550
           I      Y  L+ + SR    E A  + ++M
Sbjct: 566 IRPIEKHYACLVDLLSRAGRFEEAQALIEKM 596


>gi|414885949|tpg|DAA61963.1| TPA: hypothetical protein ZEAMMB73_954210 [Zea mays]
          Length = 633

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 233/591 (39%), Positives = 365/591 (61%), Gaps = 6/591 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD++ +G L P       +++AC++ +     + +H+   R+ LA D  +  SL+ MY K
Sbjct: 48  LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCK 107

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G+V D+R VFD+M   +V+SWT +I GY Q+     EA+ L  DM++ +  PN FT
Sbjct: 108 C---GAVSDARHVFDKMPSRDVVSWTYLIAGYAQNY-MPAEAIGLLPDMLRARFRPNGFT 163

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F S+LKA G     ++ EQ++  AVK     D  VG++L+ MYAR  +M+ A   F+ L 
Sbjct: 164 FTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVFDRLV 223

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            KN VS+N ++  +A+  + E       E++  G G + +T++S+ S  + IGA+ +G  
Sbjct: 224 SKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRW 283

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA +IKSG +    + N ++ MY++  ++  A +VF  M+ R++++W +M+T  A++G 
Sbjct: 284 VHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGL 343

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+  F ++   GI+ N IT+++VL+ACSH GL+ EG KH+  M  ++ +   ++HY 
Sbjct: 344 GKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEIDHYV 402

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
             VDLLGR+G L EAL F+  MP+     VW   LGACR+H + ++G++AA+ + E DP 
Sbjct: 403 SFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFELDPD 462

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D    +LL N+YAS G W   A +RK MK   + KE  CSW++ +N VH F   + +HPK
Sbjct: 463 DTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDDTHPK 522

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + +IY   +++ ++IK+ GY+P+T  VL  + E+++   L  HSEKIA+AF LI+     
Sbjct: 523 SGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINMPAGA 582

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IR+ KN+R+CGDCH+A KY+S V  REIV+RD+NRFHH  +G CSC DYW
Sbjct: 583 SIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 633



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 108/335 (32%), Positives = 181/335 (54%), Gaps = 7/335 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           LDL+      P    Y  ++ +C + +N    + +H+ L+RS L  ++ +LNSLI +Y K
Sbjct: 48  LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSRSCLAGDAFLLNSLIHMYCK 107

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG +++A  +F  M + RD+VSW+ +I+ Y       +AI +  +ML   F PN + F++
Sbjct: 108 CGAVSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTS 166

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++A       +IG  ++   +K  + D DV VG AL+DM+ +    ++ A  VFD++  
Sbjct: 167 LLKATGACGGCSIGEQMHALAVKYNW-DEDVYVGSALLDMYARCE-QMDMAIMVFDRLVS 224

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN V W  +I    +       +  F +M  +GF    FT S + SA + +     G+ +
Sbjct: 225 KNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWV 284

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  I++G  L   VG +++ MYAK    GS+ D+RKVFDRM   ++++W  ++T   Q 
Sbjct: 285 HAHLIKSGQKLTAFVGNTMLGMYAK---SGSMVDARKVFDRMDKRDLVTWNTMLTALAQY 341

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            G  KEAV  F ++ +  +  N  TF SVL AC +
Sbjct: 342 -GLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSH 375



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 203/397 (51%), Gaps = 10/397 (2%)

Query: 169 VEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           +++L  G   P    + ++I AC+  +N+A    I+  L +      D  +  +LI M+ 
Sbjct: 48  LDLLHAGELAPTPRLYHSIIAACAQFKNLAGARAIHAHLSR-SCLAGDAFLLNSLIHMYC 106

Query: 228 K-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
           K G+V    A  VFDKM  ++ V WT +I    Q   P +AI L  DM+ + F P+ FT 
Sbjct: 107 KCGAV--SDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTF 164

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + ++ A       + G+Q+H+ A++     DV VG +L+DMYA+C     +D +  VFDR
Sbjct: 165 TSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCE---QMDMAIMVFDR 221

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           ++  N +SW A+I G+ +    +   +K F++M +      HFT++S+  A   +     
Sbjct: 222 LVSKNEVSWNALIAGFARKADGETTLMK-FAEMQRNGFGATHFTYSSMFSAFARIGALEQ 280

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
              V+ H +K G+ L   VGN+++ MYA+SG M DARK F+ + +++LV++NTM+ A A+
Sbjct: 281 GRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQ 340

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
               ++A     EI   G+  +  TF S+L+  S  G + +G+     +     +     
Sbjct: 341 YGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDH 400

Query: 527 YNALISMYSRCANV-EAAFQVFKEMEDRNVISWTSMI 562
           Y + + +  R   + EA   VFK   +     W +++
Sbjct: 401 YVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALL 437



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +AI  L  M +    P+  T++ LLK+        +G+ +H+L  +   + +  + ++L+
Sbjct: 144 EAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALL 203

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y++C  ++ A  +F  + +K + VSW+++I+ +  +      +  F EM   GF    
Sbjct: 204 DMYARCEQMDMAIMVFDRLVSKNE-VSWNALIAGFARKADGETTLMKFAEMQRNGFGATH 262

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + +S++  A +    +  G  ++  L+K G       VG  ++ M+ K S  +  A KVF
Sbjct: 263 FTYSSMFSAFARIGALEQGRWVHAHLIKSGQ-KLTAFVGNTMLGMYAK-SGSMVDARKVF 320

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+M +++ V W  M+T   Q G  ++A+  F ++   G   ++ T   V++ACS   L  
Sbjct: 321 DRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVK 380

Query: 301 SGKQ 304
            GK 
Sbjct: 381 EGKH 384


>gi|347954516|gb|AEP33758.1| organelle transcript processing 82, partial [Barbarea verna]
          Length = 710

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 256/692 (36%), Positives = 402/692 (58%), Gaps = 32/692 (4%)

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCT 259
           II+  ++K G  +++  +   L    +  + D L  A  VF+ + E N + W  M     
Sbjct: 20  IIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLPYAISVFETIQEPNLLIWNTMFRGHA 79

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
               P  AI+L++ MI  G LP+ +T   ++ +C++L++   G+Q+H   ++ G  LD+ 
Sbjct: 80  LSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLY 139

Query: 320 VGCSLVDMYAKC--------TVDGS--------------------VDDSRKVFDRMLDHN 351
           V  SL+ MY K           DGS                    ++ ++K+FD +   +
Sbjct: 140 VHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKD 199

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SW AII+GY  + G +KEA+ LF +M++  V P+  T  +V+ AC       +  QV+
Sbjct: 200 VVSWNAIISGYADT-GNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVH 258

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
           +     G   +  + N+LI +Y++ G +E A   F+ L  K+++S+NTM+  Y      +
Sbjct: 259 SWIDDHGLGSNLKIVNALIDLYSKCGEVETACGLFQGLSNKDVISWNTMIGGYTHLNLYK 318

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK--SGFESNHCIYNA 529
           +A  L  E+  +G   +  T  S+L   + +GAI  G  IH  I K   G  +   +  +
Sbjct: 319 EALLLFQEMLRSGENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTS 378

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MY++C ++EAA QVF  M  R + +  +MI GFA HG A  A +IF +M  +GI+P+
Sbjct: 379 LIDMYAKCGDIEAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPD 438

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            IT++ +LSACSH+G++  G + FRSM   + I  ++EHY CM+DLLG  G   EA E I
Sbjct: 439 DITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEHYGCMIDLLGHLGLFKEAEEMI 498

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            +M +  D ++W + L AC++HG+ ELG+  A+ +++ +P++P +++LLSN+YA+AG W 
Sbjct: 499 NTMTMEPDGVIWCSLLKACKMHGNVELGESFAQKLIKIEPENPGSYVLLSNIYATAGRWN 558

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VANIR  + ++ + K  GCS IE D+ VH+F +G+  HP+  EIY  L+++ + ++E G
Sbjct: 559 EVANIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEEAG 618

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++PDT+ VL E+EEE K   L  HSEK+A+AFGLIST     + + KNLRVC +CH A K
Sbjct: 619 FVPDTSEVLQEMEEEFKQGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEATK 678

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IS +  REI+ RD  RFHH +DG CSCNDYW
Sbjct: 679 LISKIYKREIIARDRTRFHHFRDGVCSCNDYW 710



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 146/571 (25%), Positives = 264/571 (46%), Gaps = 81/571 (14%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS---LYSKCGDLN 130
           NHP L     LL +C   +     +++H+ + ++ L   +  L+ L+    L      L 
Sbjct: 2   NHPSLS----LLHNC---KTLQSLRIIHAQMIKTGLHNTNYALSRLLEFCILSPNFDGLP 54

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
            A  +F+++  + +++ W++M   +      V AI ++V M+ LG  PN Y F  ++++C
Sbjct: 55  YAISVFETI-QEPNLLIWNTMFRGHALSSDPVSAIKLYVCMISLGLLPNSYTFPFLLKSC 113

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK------------GSVD------ 232
           +  +    G  I+G +LK GY + D+ V  +LI M+VK            GS        
Sbjct: 114 AKLKVSKEGQQIHGHVLKLGY-ELDLYVHTSLISMYVKNGRWKDAHKVFDGSSHRDVVSY 172

Query: 233 ------------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
                       +ESA K+FD++  K+ V W  +I+     G  ++A+ LF +M+ +   
Sbjct: 173 TALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADTGNNKEALDLFKEMMKTNVK 232

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD  T+  VVSAC++      G+Q+HSW    GL  ++ +  +L+D+Y+KC   G V+ +
Sbjct: 233 PDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLKIVNALIDLYSKC---GEVETA 289

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             +F  + + +V+SW  +I GY       KEA+ LF +M++    PN  T  S+L AC  
Sbjct: 290 CGLFQGLSNKDVISWNTMIGGYTHL-NLYKEALLLFQEMLRSGENPNDVTMLSILPACAQ 348

Query: 401 LLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
           L   +    ++ +  KR + + +   +  SLI MYA+ G +E A + F S+  + L + N
Sbjct: 349 LGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMHHRTLSACN 408

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  +A +  +  AF++   +   G+     TF  LLS  S  G +  G +I   + ++
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQN 468

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
                                    +++  ++E      +  MI      G    A E+ 
Sbjct: 469 -------------------------YKITPKLE-----HYGCMIDLLGHLGLFKEAEEMI 498

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEG 609
             M    ++P+G+ + ++L AC   G +  G
Sbjct: 499 NTMT---MEPDGVIWCSLLKACKMHGNVELG 526



 Score =  149 bits (375), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 180/362 (49%), Gaps = 38/362 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  LLKSC + +    G+ +H  + +   E +  +  SLIS+Y K G 
Sbjct: 94  MISLGLLPNSYTFPFLLKSCAKLKVSKEGQQIHGHVLKLGYELDLYVHTSLISMYVKNGR 153

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
             +A+K+F    ++                              +D+VSW+++IS Y + 
Sbjct: 154 WKDAHKVFDGSSHRDVVSYTALITGYASRGYIESAQKMFDEIPVKDVVSWNAIISGYADT 213

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G   +A+ +F EM++    P+E     V+ AC+ + ++ +G  ++ ++   G   S++ +
Sbjct: 214 GNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHG-LGSNLKI 272

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             ALID++ K   ++E+A  +F  ++ K+ + W  MI   T L   ++A+ LF +M+ SG
Sbjct: 273 VNALIDLYSKCG-EVETACGLFQGLSNKDVISWNTMIGGYTHLNLYKEALLLFQEMLRSG 331

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTVDGS 336
             P+  T+  ++ AC++L     G+ +H +  +   G+     +  SL+DMYAKC   G 
Sbjct: 332 ENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKC---GD 388

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           ++ + +VF+ M    + +  A+I G+    GR   A  +FS M +  + P+  TF  +L 
Sbjct: 389 IEAAHQVFNSMHHRTLSACNAMIFGFAMH-GRANAAFDIFSRMRKNGIEPDDITFVGLLS 447

Query: 397 AC 398
           AC
Sbjct: 448 AC 449



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/252 (29%), Positives = 129/252 (51%), Gaps = 3/252 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           + G  ++A+     M +    PD  T   ++ +C +S +  LG+ VHS +    L  N  
Sbjct: 212 DTGNNKEALDLFKEMMKTNVKPDESTMVTVVSACAQSGSIQLGRQVHSWIDDHGLGSNLK 271

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           I+N+LI LYSKCG++  A  +F+ + NK D++SW++MI  Y +     +A+ +F EML  
Sbjct: 272 IVNALIDLYSKCGEVETACGLFQGLSNK-DVISWNTMIGGYTHLNLYKEALLLFQEMLRS 330

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDL 233
           G  PN+    +++ AC+    +  G  I+ ++ K      +   +  +LIDM+ K   D+
Sbjct: 331 GENPNDVTMLSILPACAQLGAIDFGRWIHVYIDKRIKGVTNASSLRTSLIDMYAKCG-DI 389

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E+A++VF+ M  +       MI      G    A  +F  M  +G  PD  T  G++SAC
Sbjct: 390 EAAHQVFNSMHHRTLSACNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSAC 449

Query: 294 SELELFTSGKQL 305
           S   +   G+++
Sbjct: 450 SHSGMLDLGRRI 461



 Score = 39.7 bits (91), Expect = 8.1,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVI 115
           GR   A      M + G  PD  T+  LL +C  S    LG+ +   +T++ K+ P    
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRRIFRSMTQNYKITPKLEH 477

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
              +I L    G   EA ++  +M  + D V W S++ +
Sbjct: 478 YGCMIDLLGHLGLFKEAEEMINTMTMEPDGVIWCSLLKA 516


>gi|225457769|ref|XP_002278218.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial [Vitis vinifera]
 gi|302142763|emb|CBI19966.3| unnamed protein product [Vitis vinifera]
          Length = 1048

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 264/749 (35%), Positives = 430/749 (57%), Gaps = 12/749 (1%)

Query: 36   FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
            F+  P T+    N +I  H+  G   +AI     M + G      T   +L +       
Sbjct: 306  FVQMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEAL 365

Query: 95   HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            + G LVH+   +  L  N  + +SLI++Y+KC  +  A K+F ++ ++R++V W++M+  
Sbjct: 366  NYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCEKMEAAKKVFDAL-DERNLVLWNAMLGG 424

Query: 155  YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            Y   G     + +F EM   GF P+E+ +++++ AC+  E + +G  ++ F++K   F+ 
Sbjct: 425  YAQNGYASKVMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIKHN-FEY 483

Query: 215  DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            ++ V   L+DM+ K    LE A + F+ +  ++ V W  +I    Q     +A  +F  M
Sbjct: 484  NLFVENTLVDMYAKCGA-LEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNMFRRM 542

Query: 275  ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            IL G  PD  +L+ ++S C+ L+    G+Q+H + +++GL   +  G SL+DMY KC   
Sbjct: 543  ILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQTCLYAGSSLIDMYVKC--- 599

Query: 335  GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
            G+++ +R VF  M   +V+S  AII GY Q+     EA+ LF +M    + P+  TFAS+
Sbjct: 600  GAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL--VEAIDLFQEMQNEGLNPSEITFASL 657

Query: 395  LKACGNLLDSNVAEQVYTHAVKRGRALD-DCVGNSLISMYARSGRMEDARKAF-ESLFEK 452
            L AC      N+  Q++    KRG   D D +G SL+ MY  S R  DA   F E  + K
Sbjct: 658  LDACTGPYKLNLGRQIHCLIQKRGLLYDGDFLGVSLLVMYMNSQRKTDADILFSEFQYPK 717

Query: 453  NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
            + + +  ++  + +N  SE+A +L  E+          TFAS+L   S + ++G G  IH
Sbjct: 718  STILWTAIISGHTQNGCSEEALQLYQEMHRNNARPDQATFASVLRACSILASLGDGRMIH 777

Query: 513  ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN-VISWTSMITGFAKHGFA 571
            + I   G +S+    +A++ MY++C +++++ QVF+EM  +N VISW SMI GFAK+G+A
Sbjct: 778  SLIFHVGLDSDELTGSAVVDMYAKCGDMKSSVQVFEEMGSKNDVISWNSMIVGFAKNGYA 837

Query: 572  ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
              AL+IF +M    I+P+ +T++ VL+ACSHAG +SEG + F  M   + IV R++H AC
Sbjct: 838  ENALKIFDEMKHTRIRPDDVTFLGVLTACSHAGRVSEGREIFDIMVHSYKIVPRLDHCAC 897

Query: 632  MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
            M+DLLGR G L EA EFI  +    + ++W T LGACR+HGD   G+ AAE ++E +P++
Sbjct: 898  MIDLLGRWGFLKEAEEFIDKLNFEPNAMIWATLLGACRIHGDDIRGRRAAEKLIELEPEN 957

Query: 692  PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
             + ++LLSN+YA++G+W+ V ++R+ M+E+ L K  GCSWI    K + F  G+  HP  
Sbjct: 958  SSPYVLLSNIYAASGNWDEVNSVRRAMREKGLRKLPGCSWIVVGQKTNLFVAGDKFHPSA 1017

Query: 752  LEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             EI+A L  L   +KE GY+ +T+ +L +
Sbjct: 1018 GEIHALLKDLIALMKEDGYIAETDSLLED 1046



 Score =  307 bits (787), Expect = 1e-80,   Method: Compositional matrix adjust.
 Identities = 183/547 (33%), Positives = 304/547 (55%), Gaps = 47/547 (8%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G +++ I+    +   G  P+  TY+++L SC R  +  LGK VH  + +   E NS   
Sbjct: 161 GSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFNSFCE 220

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            SLI +YSKCG L +A KIF ++ +  D VSW++MI+ YV  G   +A+ +F +M +LG 
Sbjct: 221 GSLIDMYSKCGSLVDARKIFDAVVDP-DTVSWTAMIAGYVQVGLPEEALKVFEDMQKLGL 279

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++  F  VI AC     V +G +             D C      D+FV         
Sbjct: 280 VPDQVAFVTVITAC-----VGLGRL------------DDAC------DLFV--------- 307

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
                +M   N V W +MI+   + GC  +AI  F +M  +G    R TL  V+SA + L
Sbjct: 308 -----QMPNTNVVAWNVMISGHVKRGCDIEAIDFFKNMWKTGVKSTRSTLGSVLSAIASL 362

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E    G  +H+ AI+ GL  +V VG SL++MYAKC     ++ ++KVFD + + N++ W 
Sbjct: 363 EALNYGLLVHAQAIKQGLNSNVYVGSSLINMYAKCE---KMEAAKKVFDALDERNLVLWN 419

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A++ GY Q+G   K  +KLFS+M      P+ FT+ S+L AC  L    +  Q+++  +K
Sbjct: 420 AMLGGYAQNGYASK-VMKLFSEMRGCGFWPDEFTYTSILSACACLECLEMGRQLHSFIIK 478

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                +  V N+L+ MYA+ G +E+AR+ FE +  ++ VS+N ++  Y +  + ++AF +
Sbjct: 479 HNFEYNLFVENTLVDMYAKCGALEEARQQFEFIRNRDNVSWNAIIVGYVQEEDEDEAFNM 538

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY--NALISMY 534
              +   G+     + AS+LSG +++ A+ +GEQ+H  ++KSG ++  C+Y  ++LI MY
Sbjct: 539 FRRMILDGIAPDEVSLASILSGCANLQALEQGEQVHCFLVKSGLQT--CLYAGSSLIDMY 596

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C  +EAA  VF  M  R+V+S  ++I G+A++     A+++F +M  +G+ P+ IT+ 
Sbjct: 597 VKCGAIEAARYVFSCMPSRSVVSMNAIIAGYAQNDL-VEAIDLFQEMQNEGLNPSEITFA 655

Query: 595 AVLSACS 601
           ++L AC+
Sbjct: 656 SLLDACT 662



 Score =  278 bits (711), Expect = 9e-72,   Method: Compositional matrix adjust.
 Identities = 170/583 (29%), Positives = 301/583 (51%), Gaps = 51/583 (8%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           K  HP  +T   L ++   S+  H   L     ++ +L       ++++ LY+KCG++  
Sbjct: 81  KIRHPFDETPQRLAQASRTSKTIHAQTLKFGFGSKGRLG------SAIVDLYAKCGNVEF 134

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A K F  +  KRDI++W+S++S Y  +G     I  F  +   G  PN++ ++ V+ +C+
Sbjct: 135 AAKAFNQL-EKRDILAWNSVLSMYSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCA 193

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVG 250
              ++ +G  ++  ++K G+  +  C G +LIDM+ K GS  L  A K+FD + + +TV 
Sbjct: 194 RLVDIDLGKQVHCGVIKMGFEFNSFCEG-SLIDMYSKCGS--LVDARKIFDAVVDPDTVS 250

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           WT MI    Q+G P +A+++F DM   G +PD+     V++AC  L              
Sbjct: 251 WTAMIAGYVQVGLPEEALKVFEDMQKLGLVPDQVAFVTVITACVGL-------------- 296

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
                                   G +DD+  +F +M + NV++W  +I+G+V+ G  D 
Sbjct: 297 ------------------------GRLDDACDLFVQMPNTNVVAWNVMISGHVKRGC-DI 331

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+  F +M +  V     T  SVL A  +L   N    V+  A+K+G   +  VG+SLI
Sbjct: 332 EAIDFFKNMWKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSNVYVGSSLI 391

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           +MYA+  +ME A+K F++L E+NLV +N M+  YA+N  + K  +L  E+   G     +
Sbjct: 392 NMYAKCEKMEAAKKVFDALDERNLVLWNAMLGGYAQNGYASKVMKLFSEMRGCGFWPDEF 451

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           T+ S+LS  + +  +  G Q+H+ IIK  FE N  + N L+ MY++C  +E A Q F+ +
Sbjct: 452 TYTSILSACACLECLEMGRQLHSFIIKHNFEYNLFVENTLVDMYAKCGALEEARQQFEFI 511

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
            +R+ +SW ++I G+ +      A  +F +M+ DGI P+ ++  ++LS C++   + +G 
Sbjct: 512 RNRDNVSWNAIIVGYVQEEDEDEAFNMFRRMILDGIAPDEVSLASILSGCANLQALEQG- 570

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           +       + G+   +   + ++D+  + G++  A      MP
Sbjct: 571 EQVHCFLVKSGLQTCLYAGSSLIDMYVKCGAIEAARYVFSCMP 613



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 82/333 (24%), Positives = 165/333 (49%), Gaps = 25/333 (7%)

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
           S  ++ ++   +K G      +G++++ +YA+ G +E A KAF  L +++++++N+++  
Sbjct: 97  SRTSKTIHAQTLKFGFGSKGRLGSAIVDLYAKCGNVEFAAKAFNQLEKRDILAWNSVLSM 156

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           Y++  + E+       +++ GV  + +T+A +LS  + +  I  G+Q+H  +IK GFE N
Sbjct: 157 YSRQGSLEQVIWCFGSLQNCGVSPNQFTYAIVLSSCARLVDIDLGKQVHCGVIKMGFEFN 216

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
                +LI MYS+C ++  A ++F  + D + +SWT+MI G+ + G    AL++F  M  
Sbjct: 217 SFCEGSLIDMYSKCGSLVDARKIFDAVVDPDTVSWTAMIAGYVQVGLPEEALKVFEDMQK 276

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
            G+ P+ + ++ V++AC   G + +    F  M + + +      +  M+    + G   
Sbjct: 277 LGLVPDQVAFVTVITACVGLGRLDDACDLFVQMPNTNVVA-----WNVMISGHVKRGCDI 331

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA------------AEMILEQDPQD 691
           EA++F ++M        W+T + + R    + L   A            A+ I +    +
Sbjct: 332 EAIDFFKNM--------WKTGVKSTRSTLGSVLSAIASLEALNYGLLVHAQAIKQGLNSN 383

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
                 L N+YA     E    +   + ERNL+
Sbjct: 384 VYVGSSLINMYAKCEKMEAAKKVFDALDERNLV 416


>gi|15240591|ref|NP_196831.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75181128|sp|Q9LYU9.1|PP378_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g13270, chloroplastic; Flags: Precursor
 gi|7529282|emb|CAB86634.1| putative protein [Arabidopsis thaliana]
 gi|332004490|gb|AED91873.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 752

 Score =  475 bits (1223), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 254/703 (36%), Positives = 405/703 (57%), Gaps = 20/703 (2%)

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           +A     EM + G   + Y +  +  AC    +++ G +++   ++ G  +  V +   +
Sbjct: 66  EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCV 124

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           + M+ +    LE A K+FD+M+E N V  T MI+   + G    A+ LF  M+ SG  P 
Sbjct: 125 LQMYCECR-SLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
               + ++ +         G+Q+H+  IR GL  +  +   +V+MY KC   G +  +++
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC---GWLVGAKR 240

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           VFD+M     ++ T ++ GY Q+G R ++A+KLF D++   V  + F F+ VLKAC +L 
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAG-RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
           + N+ +Q++    K G   +  VG  L+  Y +    E A +AF+ + E N VS++ ++ 
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
            Y +    E+A +    +        +++T+ S+    S +     G Q+HA  IK    
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
            +    +ALI+MYS+C  ++ A +VF+ M++ ++++WT+ I+G A +G A+ AL +F KM
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
           ++ G+KPN +T+IAVL+ACSHAGL+ +G     +M  ++ +   ++HY CM+D+  RSG 
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
           L EAL+F+++MP   D + W+ FL  C  H + ELG+ A E + + DP+D A ++L  NL
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           Y  AG WE  A + K M ER L KE  CSWI+   K+H+F VG+  HP+T EIY      
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE----- 654

Query: 762 ALKIKEF-GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST--SKSKPIRVFKNL 818
             K+KEF G++    F  +  E  ++   L  HSE++A+AFGLIS   +   PI+VFKNL
Sbjct: 655 --KLKEFDGFMEGDMFQCNMTERREQ---LLDHSERLAIAFGLISVHGNAPAPIKVFKNL 709

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R C DCH   K++S+VTG EIV+RDS RFHH K+GKCSCNDYW
Sbjct: 710 RACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752



 Score =  233 bits (593), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 147/514 (28%), Positives = 270/514 (52%), Gaps = 10/514 (1%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           ++ +A   L  M + G      +Y  L ++C   R+   G+L+H  +      P+ ++ N
Sbjct: 63  KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQN 122

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
            ++ +Y +C  L +A+K+F  M ++ + VS ++MIS+Y  +G    A+ +F  ML  G  
Sbjct: 123 CVLQMYCECRSLEDADKLFDEM-SELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P    ++ ++++  N   +  G  I+  +++ G   S+  +   +++M+VK    L  A 
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG-LCSNTSIETGIVNMYVKCGW-LVGAK 239

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +VFD+M  K  V  T ++   TQ G  RDA++LF+D++  G   D F  S V+ AC+ LE
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               GKQ+H+   + GL  +V VG  LVD Y KC+   S + + + F  + + N +SW+A
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS---SFESACRAFQEIREPNDVSWSA 356

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           II+GY Q   + +EAVK F  +     +  N FT+ S+ +AC  L D N+  QV+  A+K
Sbjct: 357 IISGYCQM-SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           R         ++LI+MY++ G ++DA + FES+   ++V++   +  +A   N+ +A  L
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYS 535
             ++   G+  ++ TF ++L+  S  G + +G+  +   + K         Y+ +I +Y+
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535

Query: 536 RCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           R   ++ A +  K M  + + +SW   ++G   H
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 234/443 (52%), Gaps = 21/443 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G + KA+     M   G+ P    Y+ LLKS +  R    G+ +H+ + R+ L  N
Sbjct: 159 YAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSN 218

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I   ++++Y KCG L  A ++F  M  K+  V+ + ++  Y   G+  DA+ +FV+++
Sbjct: 219 TSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP-VACTGLMVGYTQAGRARDALKLFVDLV 277

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   + + FS V++AC++ E + +G  I+  + K G  +S+V VG  L+D ++K S  
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG-LESEVSVGTPLVDFYIKCS-S 335

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVS 291
            ESA + F ++ E N V W+ +I+   Q+    +A++ F  +   +  + + FT + +  
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L     G Q+H+ AI+  L        +L+ MY+KC   G +DD+ +VF+ M + +
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC---GCLDDANEVFESMDNPD 452

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ-- 409
           +++WTA I+G+   G    EA++LF  M+   + PN  TF +VL AC +   + + EQ  
Sbjct: 453 IVAWTAFISGHAYYGNAS-EALRLFEKMVSCGMKPNSVTFIAVLTACSH---AGLVEQGK 508

Query: 410 --VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--Y 464
             + T   K   A      + +I +YARSG +++A K  +++ FE + +S+   +     
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568

Query: 465 AKNLN-SEKAFELLHEI--EDTG 484
            KNL   E A E L ++  EDT 
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTA 591



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 11/316 (3%)

Query: 50  LIYHLNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           ++ +   GR + A+   +DL+T+ G   D   +S++LK+C      +LGK +H+ + +  
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           LE    +   L+  Y KC     A + F+ +    D VSWS++IS Y    +  +A+  F
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQMSQFEEAVKTF 374

Query: 169 VEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
             +  +     N + ++++ +ACS   +  IG  ++   +K     S      ALI M+ 
Sbjct: 375 KSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES-ALITMYS 433

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K    L+ A +VF+ M   + V WT  I+     G   +A+RLF  M+  G  P+  T  
Sbjct: 434 KCGC-LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 492

Query: 288 GVVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
            V++ACS   L   GK      +R   +A  +     ++D+YA+    G +D++ K    
Sbjct: 493 AVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR---SGLLDEALKFMKN 549

Query: 347 M-LDHNVMSWTAIITG 361
           M  + + MSW   ++G
Sbjct: 550 MPFEPDAMSWKCFLSG 565



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 2/143 (1%)

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N  + + +K+    +AFE L E++  GV  S+Y++  L      + ++  G  +H R+ +
Sbjct: 52  NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-R 110

Query: 518 SGFESNHCIY-NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
            G E+   +  N ++ MY  C ++E A ++F EM + N +S T+MI+ +A+ G   +A+ 
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170

Query: 577 IFYKMLADGIKPNGITYIAVLSA 599
           +F  MLA G KP    Y  +L +
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKS 193


>gi|18394615|ref|NP_564054.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806507|sp|Q0WN60.2|PPR48_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g18485
 gi|332191599|gb|AEE29720.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 970

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 267/806 (33%), Positives = 440/806 (54%), Gaps = 20/806 (2%)

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           I T DL+      PD  TY  ++K+C    +  +G  VH L+ ++ L  +  + N+L+S 
Sbjct: 178 ISTTDLL------PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----GFCP 178
           Y   G + +A ++F  M  +R++VSW+SMI  + + G   ++  +  EM+E      F P
Sbjct: 232 YGTHGFVTDALQLFDIM-PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           +      V+  C+    + +G  ++G+ +K    D ++ +  AL+DM+ K    + +A  
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGC-ITNAQM 348

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSEL 296
           +F     KN V W  M+   +  G       +   M+  G     D  T+   V  C   
Sbjct: 349 IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 408

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
               S K+LH ++++     +  V  + V  YAKC   GS+  +++VF  +    V SW 
Sbjct: 409 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC---GSLSYAQRVFHGIRSKTVNSWN 465

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I G+ QS    + ++     M    + P+ FT  S+L AC  L    + ++V+   ++
Sbjct: 466 ALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                D  V  S++S+Y   G +   +  F+++ +K+LVS+NT++  Y +N   ++A  +
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             ++   G+     +   +    S + ++  G + HA  +K   E +  I  +LI MY++
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
             ++  + +VF  +++++  SW +MI G+  HG A  A+++F +M   G  P+ +T++ V
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI-RSMPLS 655
           L+AC+H+GLI EG ++   M    G+   ++HYAC++D+LGR+G L +AL  +   M   
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           ADV +W++ L +CR+H + E+G+  A  + E +P+ P  ++LLSNLYA  G WE V  +R
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           +RM E +L K+AGCSWIE + KV  F VGE       EI +    L +KI + GY PDT 
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
            V H+L EE+K++ L  HSEK+A+ +GLI TS+   IRV+KNLR+C DCH A K IS V 
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            REIV+RD+ RFHH K+G CSC DYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970



 Score =  242 bits (617), Expect = 7e-61,   Method: Compositional matrix adjust.
 Identities = 156/628 (24%), Positives = 326/628 (51%), Gaps = 29/628 (4%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +   LLL++  + ++  +G+ +H L++ S +L  + V+   +I++Y+ CG  +++  +F 
Sbjct: 85  EALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENV 196
           ++ +K ++  W+++ISSY       + +  F+EM+      P+ + +  VI+AC+   +V
Sbjct: 145 ALRSK-NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
            IG  ++G ++K G  + DV VG AL+  +   G V    A ++FD M E+N V W  MI
Sbjct: 204 GIGLAVHGLVVKTGLVE-DVFVGNALVSFYGTHGFV--TDALQLFDIMPERNLVSWNSMI 260

Query: 256 TRCTQLGCPRDAIRLFLDMIL----SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
              +  G   ++  L  +M+       F+PD  TL  V+  C+       GK +H WA++
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
             L  ++ +  +L+DMY+KC   G + +++ +F    + NV+SW  ++ G+  + G    
Sbjct: 321 LRLDKELVLNNALMDMYSKC---GCITNAQMIFKMNNNKNVVSWNTMVGGF-SAEGDTHG 376

Query: 372 AVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
              +   M+ G   V  +  T  + +  C +       ++++ +++K+    ++ V N+ 
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           ++ YA+ G +  A++ F  +  K + S+N ++  +A++ +   + +   +++ +G+   +
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +T  SLLS  S + ++  G+++H  II++  E +  +Y +++S+Y  C  +     +F  
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           MED++++SW ++ITG+ ++GF  RAL +F +M+  GI+  GI+ + V  ACS    +  G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616

Query: 610 WKHFRSMYDEHGIVQRMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
            +     Y    +++     AC ++D+  ++GS+T++ +    +        W   +   
Sbjct: 617 RE--AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGY 673

Query: 669 RVHGDTELGKHAAEMILE-----QDPQD 691
            +HG   L K A ++  E      +P D
Sbjct: 674 GIHG---LAKEAIKLFEEMQRTGHNPDD 698



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 12/337 (3%)

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAI-RTGLALDVCVGCSLVDMYAKCTVDGS 336
            FL  R  L  ++ A  + +    G+++H      T L  D  +   ++ MYA C   GS
Sbjct: 79  AFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC---GS 135

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG-QVAPNHFTFASVL 395
            DDSR VFD +   N+  W A+I+ Y ++   D E ++ F +MI    + P+HFT+  V+
Sbjct: 136 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVI 194

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           KAC  + D  +   V+   VK G   D  VGN+L+S Y   G + DA + F+ + E+NLV
Sbjct: 195 KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLV 254

Query: 456 SYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGT---SAYTFASLLSGASSIGAIGKGEQI 511
           S+N+M+  ++ N  SE++F LL E +E+ G G       T  ++L   +    IG G+ +
Sbjct: 255 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   +K   +    + NAL+ MYS+C  +  A  +FK   ++NV+SW +M+ GF+  G  
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 374

Query: 572 ARALEIFYKMLADG--IKPNGITYIAVLSACSHAGLI 606
               ++  +MLA G  +K + +T +  +  C H   +
Sbjct: 375 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411


>gi|357493705|ref|XP_003617141.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518476|gb|AET00100.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 684

 Score =  475 bits (1222), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 266/685 (38%), Positives = 388/685 (56%), Gaps = 22/685 (3%)

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           SAV   CS        HII   +     F S+      L++M+ K  + L SA  V    
Sbjct: 15  SAVSTHCSILGRTIHAHIIRTHVTPLPSFLSN-----HLVNMYSKLDL-LNSAQHVLSLT 68

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
             +  V WT +I+ C        A+  F +M      P+ FT   V  A + +++  +GK
Sbjct: 69  HLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGK 128

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H  A++ G+  DV VGCS  DMY K    G   D+  +FD M   N+ +W A I+  V
Sbjct: 129 QIHGLALKGGMIYDVFVGCSCFDMYCKTGFRG---DACNMFDEMPQRNLATWNAYISNAV 185

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           Q   R  +A+  F + +     PN  TF + L AC +++  N+  Q++   V+ G   D 
Sbjct: 186 QDR-RSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGYKEDV 244

Query: 424 CVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKNLNSEKA----FELLH 478
            V N LI  Y + G +  A   F  +   KN+VS+ +M+ A  +N   E+A     +   
Sbjct: 245 SVANGLIDFYGKCGDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQARK 304

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           E+E T      +  +S+LS  + +G +  G  +HA  +K+  E N  + +AL+ MY +C 
Sbjct: 305 EVEPTD-----FMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKCG 359

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML--ADGIKPNGITYIAV 596
           ++E A QVF E+ +RN+++W +MI G+A  G    AL +F +M   + GI+P+ +T I++
Sbjct: 360 SIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYVTLISI 419

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           LS CS  G +  G + F SM   +GI    EH+AC+VDLLGRSG +  A EFI++M +  
Sbjct: 420 LSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQNMAIQP 479

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
            + VW   LGACR+HG TELGK AAE + E D  D   H++LSN+ ASAG WE    +RK
Sbjct: 480 TISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSGNHVVLSNMLASAGRWEEATVVRK 539

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            MK+  + K  G SWI   N++H F   ++SH +  EI A L +L   +KE GY+PDTN 
Sbjct: 540 EMKDIGIKKNVGYSWIAVKNRIHVFQAKDSSHDRNSEIQAMLGKLRGGMKEAGYVPDTNL 599

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
            L +LE+E+K   ++ HSEKIA+AFGLI+  +  PIR+ KNLR+CGDCH+AIK+IS + G
Sbjct: 600 SLFDLEDEEKASEVWYHSEKIALAFGLIALPQGVPIRITKNLRICGDCHSAIKFISRIVG 659

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REI++RD++RFH  KDG CSC DYW
Sbjct: 660 REIIVRDNHRFHRFKDGCCSCKDYW 684



 Score =  212 bits (539), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 146/501 (29%), Positives = 249/501 (49%), Gaps = 15/501 (2%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEAN 133
           HP  +    LL+S + +    LG+ +H+ + R+ + P  S + N L+++YSK   LN A 
Sbjct: 4   HPQ-NLLGSLLESAVSTHCSILGRTIHAHIIRTHVTPLPSFLSNHLVNMYSKLDLLNSAQ 62

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
            +  S+ + R +V+W+S+IS  V+  + + A+  F  M      PN++ F  V +A +  
Sbjct: 63  HVL-SLTHLRTVVTWTSLISGCVHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFV 121

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
           +    G  I+G  LK G    DV VGC+  DM+ K     + A  +FD+M ++N   W  
Sbjct: 122 QIPMTGKQIHGLALKGGMI-YDVFVGCSCFDMYCKTGFRGD-ACNMFDEMPQRNLATWNA 179

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
            I+   Q     DAI  F + +     P+  T    ++AC ++     G+QLH++ +R G
Sbjct: 180 YISNAVQDRRSLDAIVAFKEFLCVHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCG 239

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAIITGYVQSGGRDKEA 372
              DV V   L+D Y KC   G +  +  VF+R+ +  NV+SW +++   VQ+   ++  
Sbjct: 240 YKEDVSVANGLIDFYGKC---GDIVSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERAC 296

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +       + +V P  F  +SVL AC  L    +   V+  AVK     +  VG++L+ M
Sbjct: 297 MVFLQ--ARKEVEPTDFMISSVLSACAELGGLELGRSVHALAVKACVEDNIFVGSALVDM 354

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE--DTGVGTSAY 490
           Y + G +E+A + F  L E+NLV++N M+  YA   + + A  L  E+     G+  S  
Sbjct: 355 YGKCGSIENAEQVFSELPERNLVTWNAMIGGYAHQGDIDMALRLFEEMTLGSHGIRPSYV 414

Query: 491 TFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           T  S+LS  S +GA+ +G QI   + +  G E     +  ++ +  R   V+ A++  + 
Sbjct: 415 TLISILSVCSRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLGRSGLVDRAYEFIQN 474

Query: 550 MEDRNVIS-WTSMITGFAKHG 569
           M  +  IS W +++     HG
Sbjct: 475 MAIQPTISVWGALLGACRMHG 495



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 237/523 (45%), Gaps = 64/523 (12%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +++ R   A+     M +    P+  T+  + K+    +    GK +H L  +  +  + 
Sbjct: 84  VHNRRFLPALLHFTNMRRDNVQPNDFTFPCVFKASAFVQIPMTGKQIHGLALKGGMIYDV 143

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  S   +Y K G   +A  +F  M  +R++ +W++ IS+ V   + +DAI  F E L 
Sbjct: 144 FVGCSCFDMYCKTGFRGDACNMFDEM-PQRNLATWNAYISNAVQDRRSLDAIVAFKEFLC 202

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           +   PN   F A + AC +   + +G  ++ F+++CGY   DV V   LID + K   D+
Sbjct: 203 VHGEPNSITFCAFLNACVDMVRLNLGRQLHAFIVRCGY-KEDVSVANGLIDFYGKCG-DI 260

Query: 234 ESAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            SA  VF+++   KN V W  M+    Q      A  +FL        P  F +S V+SA
Sbjct: 261 VSAEMVFNRIGNRKNVVSWCSMLAALVQNHEEERACMVFLQA-RKEVEPTDFMISSVLSA 319

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+EL     G+ +H+ A++  +  ++ VG +LVDMY KC   GS++++ +VF  + + N+
Sbjct: 320 CAELGGLELGRSVHALAVKACVEDNIFVGSALVDMYGKC---GSIENAEQVFSELPERNL 376

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ--VAPNHFTFASVLKACGNLLDSNVAEQV 410
           ++W A+I GY   G  D  A++LF +M  G   + P++ T  S+L  C            
Sbjct: 377 VTWNAMIGGYAHQGDIDM-ALRLFEEMTLGSHGIRPSYVTLISILSVC------------ 423

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYA 465
                                  +R G +E   + FES+      E     +  +VD   
Sbjct: 424 -----------------------SRVGAVERGIQIFESMRLNYGIEPGAEHFACVVDLLG 460

Query: 466 KNLNSEKAFELLHE--IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           ++   ++A+E +    I+ T     A   A  + G + +G I   +      + SG   N
Sbjct: 461 RSGLVDRAYEFIQNMAIQPTISVWGALLGACRMHGKTELGKIAAEKLFELDHVDSG---N 517

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMED----RNV-ISWTSM 561
           H +   L +M +     E A  V KEM+D    +NV  SW ++
Sbjct: 518 HVV---LSNMLASAGRWEEATVVRKEMKDIGIKKNVGYSWIAV 557


>gi|147841045|emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 231/563 (41%), Positives = 352/563 (62%), Gaps = 4/563 (0%)

Query: 299  FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
             T  +Q+H  A   G+  ++ V   LV  Y+      ++DD+  +FD M   + +SW+ +
Sbjct: 751  LTQVRQVHXQASVHGMLQNLIVANKLVXFYSYYR---ALDDAYGLFDGMCVRDSVSWSVM 807

Query: 359  ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
            + G+ + G         F ++I+    P+++T   V++AC +L +  +   ++    K G
Sbjct: 808  VGGFAKVGDY-MNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG 866

Query: 419  RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              LD  V  +L+ MY +   +EDAR  F+ + E++LV++  M+  YA+  N+ ++  L  
Sbjct: 867  LDLDHFVCAALVDMYGKCREIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLFD 926

Query: 479  EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
            ++ + GV        +++   + +GA+ K   I   I +  F+ +  +  A+I M+++C 
Sbjct: 927  KMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKCG 986

Query: 539  NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
             VE+A ++F  ME++NVISW++MI  +  HG   +AL++F  ML  GI PN IT +++L 
Sbjct: 987  CVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLY 1046

Query: 599  ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
            ACSHAGL+ EG + F  M++++ +   ++HY C+VDLLGR+G L EAL+ I SM    D 
Sbjct: 1047 ACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAGRLDEALKLIXSMTXEKDE 1106

Query: 659  LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
             +W  FLGACR H D  L + AA  +LE  PQ+P  +ILLSN+YA+AG WE VA IR  M
Sbjct: 1107 GLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNIYANAGRWEDVAKIRDLM 1166

Query: 719  KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
             +R L K  G +WIE DNK H+F VG+T+HP++ EIY  L  L  K++  GY+PDTNFVL
Sbjct: 1167 SQRRLKKIPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLKSLGNKLELVGYVPDTNFVL 1226

Query: 779  HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
            H+++EE K+  L+ HSEK+A+AFGLI+T +  PIR+ KNLRVCGDCHT  K +S +TGR 
Sbjct: 1227 HDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLRVCGDCHTFCKLVSAITGRV 1286

Query: 839  IVLRDSNRFHHIKDGKCSCNDYW 861
            I++RD+NRFHH K+G CSC DYW
Sbjct: 1287 IIVRDANRFHHFKEGACSCGDYW 1309



 Score =  402 bits (1032), Expect = e-109,   Method: Compositional matrix adjust.
 Identities = 205/540 (37%), Positives = 331/540 (61%), Gaps = 8/540 (1%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           L  +F +S +V+ C  L   T  +Q+H+ A   G+  ++ V   L+  Y+      ++DD
Sbjct: 60  LNPKFYISALVN-CRNL---TQVRQVHAQASVHGMLENIVVANKLIYFYSYYR---ALDD 112

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +  +FD M   + +SW+ ++ G+ + G         F ++I+    P+++T   V++AC 
Sbjct: 113 AYGLFDGMCVRDSVSWSVMVGGFAKVGDY-INCFGTFRELIRCGARPDNYTLPFVIRACR 171

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
           +L +  +   ++    K G  LD  V  +L+ MY +   +EDAR  F+ + E++LV++  
Sbjct: 172 DLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYVKCREIEDARFLFDKMQERDLVTWTV 231

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+  YA+   + ++  L  ++ + GV        +++   + +GA+ K   I   I +  
Sbjct: 232 MIGGYAECGKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKK 291

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F+ +  +  A+I MY++C  VE+A ++F  ME++NVISW++MI  +  HG   +AL++F 
Sbjct: 292 FQLDVILGTAMIDMYAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRKALDLFP 351

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            ML+ G+ P+ IT  ++L ACSHAGL+ EG + F SM++++ +   ++HY C+VDLLGR+
Sbjct: 352 MMLSSGMLPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRA 411

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L EAL+ I+SM +  D  +W  FLGACR H D  L + AA  +LE   Q+P  ++LLS
Sbjct: 412 GRLDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLS 471

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA+AG WE VA IR  M +R L K  G +WIE DNK H+F VG+T+HP++ EIY  L 
Sbjct: 472 NIYANAGRWEDVAKIRDLMSQRRLKKTPGWTWIEVDNKSHQFSVGDTTHPRSKEIYEMLK 531

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
            L+ K++  GY+PDTNFVLH+++EE K+  L+ HSEK+A+AFGLI+T +  PIR+ KNLR
Sbjct: 532 SLSNKLELVGYVPDTNFVLHDVDEELKIGILYTHSEKLAIAFGLIATPEHTPIRIIKNLR 591



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 118/370 (31%), Positives = 198/370 (53%), Gaps = 16/370 (4%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           + + +  RN    + VH+  +   +  N V+ N LI  YS    L++A  +F  M   RD
Sbjct: 66  ISALVNCRNLTQVRQVHAQASVHGMLENIVVANKLIYFYSYYRALDDAYGLFDGMC-VRD 124

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
            VSWS M+  +   G  ++    F E++  G  P+ Y    VIRAC + +N+ +G +I+ 
Sbjct: 125 SVSWSVMVGGFAKVGDYINCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHH 184

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
            + K G  D D  V  AL+DM+VK   ++E A  +FDKM E++ V WT+MI    + G  
Sbjct: 185 IVYKFG-LDLDHFVCAALVDMYVKCR-EIEDARFLFDKMQERDLVTWTVMIGGYAECGKA 242

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            +++ LF  M   G +PD+  +  VV AC++L      + +  +  R    LDV +G ++
Sbjct: 243 NESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILGTAM 302

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           +DMYAKC   G V+ +R++FDRM + NV+SW+A+I  Y    G+ ++A+ LF  M+   +
Sbjct: 303 IDMYAKC---GCVESAREIFDRMEEKNVISWSAMIAAY-GYHGQGRKALDLFPMMLSSGM 358

Query: 385 APNHFTFASVLKAC--GNLLDSNV---AEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            P+  T AS+L AC    L++  +   +     ++V+       CV    + +  R+GR+
Sbjct: 359 LPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCV----VDLLGRAGRL 414

Query: 440 EDARKAFESL 449
           ++A K  +S+
Sbjct: 415 DEALKLIKSM 424



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/363 (31%), Positives = 191/363 (52%), Gaps = 22/363 (6%)

Query: 92   RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
            R  H    VH +L       N ++ N L+  YS    L++A  +F  M   RD VSWS M
Sbjct: 755  RQVHXQASVHGMLQ------NLIVANKLVXFYSYYRALDDAYGLFDGMC-VRDSVSWSVM 807

Query: 152  ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
            +  +   G  ++    F E++  G  P+ Y    VIRAC + +N+ +G +I+  + K G 
Sbjct: 808  VGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFG- 866

Query: 212  FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
             D D  V  AL+DM+ K   ++E A  +FDKM E++ V WT+MI    + G   +++ LF
Sbjct: 867  LDLDHFVCAALVDMYGKCR-EIEDARFLFDKMXERDLVTWTVMIGGYAECGNANESLVLF 925

Query: 272  LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
              M   G +PD+  +  VV AC++L      + +  +  R    LDV +G +++DM+AKC
Sbjct: 926  DKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILGTAMIDMHAKC 985

Query: 332  TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
               G V+ +R++FDRM + NV+SW+A+I  Y    G+ ++A+ LF  M++  + PN  T 
Sbjct: 986  ---GCVESAREIFDRMEEKNVISWSAMIAAY-GYHGQGRKALDLFPMMLRSGILPNKITL 1041

Query: 392  ASVLKAC--GNLLDSNV---AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
             S+L AC    L++  +   +     ++V+       CV    + +  R+GR+++A K  
Sbjct: 1042 VSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCV----VDLLGRAGRLDEALKLI 1097

Query: 447  ESL 449
             S+
Sbjct: 1098 XSM 1100



 Score =  159 bits (401), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 90/319 (28%), Positives = 169/319 (52%), Gaps = 5/319 (1%)

Query: 233  LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            L+ AY +FD M  +++V W++M+    ++G   +    F ++I  G  PD +TL  V+ A
Sbjct: 786  LDDAYGLFDGMCVRDSVSWSVMVGGFAKVGDYMNCFGTFRELIRCGARPDNYTLPFVIRA 845

Query: 293  CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            C +L+    G+ +H    + GL LD  V  +LVDMY KC     ++D+R +FD+M + ++
Sbjct: 846  CRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYGKCR---EIEDARFLFDKMXERDL 902

Query: 353  MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            ++WT +I GY + G  + E++ LF  M +  V P+     +V+ AC  L   + A  +  
Sbjct: 903  VTWTVMIGGYAECGNAN-ESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDD 961

Query: 413  HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            +  ++   LD  +G ++I M+A+ G +E AR+ F+ + EKN++S++ M+ AY  +    K
Sbjct: 962  YIQRKKFQLDVILGTAMIDMHAKCGCVESAREIFDRMEEKNVISWSAMIAAYGYHGQGRK 1021

Query: 473  AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALI 531
            A +L   +  +G+  +  T  SLL   S  G + +G +  + + +      +   Y  ++
Sbjct: 1022 ALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVV 1081

Query: 532  SMYSRCANVEAAFQVFKEM 550
             +  R   ++ A ++   M
Sbjct: 1082 DLLGRAGRLDEALKLIXSM 1100



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 187/395 (47%), Gaps = 51/395 (12%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
           T   + + G  PD  T   ++++C   +N  +G+L+H ++ +  L+ +  +  +L+ +Y 
Sbjct: 147 TFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYV 206

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KC ++ +A  +F  M  +RD+V+W+ MI  Y   GK  +++ +F +M E G  P++    
Sbjct: 207 KCREIEDARFLFDKM-QERDLVTWTVMIGGYAECGKANESLVLFEKMREEGVVPDKVAMV 265

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            V+ AC+    +    II  ++ +   F  DV +G A+IDM+ K    +ESA ++FD+M 
Sbjct: 266 TVVFACAKLGAMHKARIIDDYIQR-KKFQLDVILGTAMIDMYAKCGC-VESAREIFDRME 323

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           EKN + W+ MI      G  R A+ LF  M+ SG LPD+ TL+ ++ ACS   L   G +
Sbjct: 324 EKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGMLPDKITLASLLYACSHAGLVEEGLR 383

Query: 305 LHS-----WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             S     +++RT +    CV    VD+  +                             
Sbjct: 384 FFSSMWEDYSVRTDVKHYTCV----VDLLGR----------------------------- 410

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
                  GR  EA+KL   M    +  +   + + L AC    D  +AE+  T  ++  +
Sbjct: 411 ------AGRLDEALKLIKSM---TIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLEL-Q 460

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           + +      L ++YA +GR ED  K  + + ++ L
Sbjct: 461 SQNPGHYVLLSNIYANAGRWEDVAKIRDLMSQRRL 495



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 148/288 (51%), Gaps = 15/288 (5%)

Query: 65   TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            T   + + G  PD  T   ++++C   +N  +G+L+H ++ +  L+ +  +  +L+ +Y 
Sbjct: 823  TFRELIRCGARPDNYTLPFVIRACRDLKNLQMGRLIHHIVYKFGLDLDHFVCAALVDMYG 882

Query: 125  KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
            KC ++ +A  +F  M  +RD+V+W+ MI  Y   G   +++ +F +M E G  P++    
Sbjct: 883  KCREIEDARFLFDKM-XERDLVTWTVMIGGYAECGNANESLVLFDKMREEGVVPDKVAMV 941

Query: 185  AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
             V+ AC+    +     I  ++ +   F  DV +G A+IDM  K    +ESA ++FD+M 
Sbjct: 942  TVVFACAKLGAMHKARTIDDYIQR-KKFQLDVILGTAMIDMHAKCGC-VESAREIFDRME 999

Query: 245  EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            EKN + W+ MI      G  R A+ LF  M+ SG LP++ TL  ++ ACS   L   G +
Sbjct: 1000 EKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGILPNKITLVSLLYACSHAGLVEEGLR 1059

Query: 305  LHS-----WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
              S     +++R  +    CV    VD+  +    G +D++ K+   M
Sbjct: 1060 FFSXMWEDYSVRXDVKHYTCV----VDLLGRA---GRLDEALKLIXSM 1100



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 48/203 (23%), Positives = 103/203 (50%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+  +++   + M ++G  PD      ++ +C +    H  +++   + R K + + ++ 
Sbjct: 240 GKANESLVLFEKMREEGVVPDKVAMVTVVFACAKLGAMHKARIIDDYIQRKKFQLDVILG 299

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++I +Y+KCG +  A +IF  M  +++++SWS+MI++Y   G+   A+ +F  ML  G 
Sbjct: 300 TAMIDMYAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLSSGM 358

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++   ++++ ACS+   V  G   +  + +     +DV     ++D+  +    L+ A
Sbjct: 359 LPDKITLASLLYACSHAGLVEEGLRFFSSMWEDYSVRTDVKHYTCVVDLLGRAG-RLDEA 417

Query: 237 YKVFDKMT-EKNTVGWTLMITRC 258
            K+   MT EK+   W   +  C
Sbjct: 418 LKLIKSMTIEKDEGLWGAFLGAC 440



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 99/203 (48%), Gaps = 3/203 (1%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
            G   +++   D M ++G  PD      ++ +C +    H  + +   + R K + + ++ 
Sbjct: 916  GNANESLVLFDKMREEGVVPDKVAMVTVVFACAKLGAMHKARTIDDYIQRKKFQLDVILG 975

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
             ++I +++KCG +  A +IF  M  +++++SWS+MI++Y   G+   A+ +F  ML  G 
Sbjct: 976  TAMIDMHAKCGCVESAREIFDRM-EEKNVISWSAMIAAYGYHGQGRKALDLFPMMLRSGI 1034

Query: 177  CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             PN+    +++ ACS+   V  G   +  + +      DV     ++D+  +    L+ A
Sbjct: 1035 LPNKITLVSLLYACSHAGLVEEGLRFFSXMWEDYSVRXDVKHYTCVVDLLGRAG-RLDEA 1093

Query: 237  YKVFDKMT-EKNTVGWTLMITRC 258
             K+   MT EK+   W   +  C
Sbjct: 1094 LKLIXSMTXEKDEGLWGAFLGAC 1116


>gi|224141479|ref|XP_002324099.1| predicted protein [Populus trichocarpa]
 gi|222867101|gb|EEF04232.1| predicted protein [Populus trichocarpa]
          Length = 676

 Score =  474 bits (1221), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 236/631 (37%), Positives = 395/631 (62%), Gaps = 11/631 (1%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A ++  ++ + +   ++ +I  C +    +   ++   + LSGF+P  F L+ ++  
Sbjct: 55  LKEALQILHQIDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEM 114

Query: 293 CSELE-LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            ++ + L  S K       R     D+C    L+  YAK    G + +++ +FD+M + +
Sbjct: 115 YAKCDSLMDSQKLFDEMPER-----DLCSWNILISGYAKM---GLLQEAKSLFDKMPERD 166

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQV 410
             SWTA+I+GYV+   R  EA++LF  M +   +  N FT +S L A   +    + +++
Sbjct: 167 NFSWTAMISGYVRHD-RPNEALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEI 225

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + + ++ G   D+ V ++L  MY + G +E+AR  F+ + ++++V++  M+D Y ++   
Sbjct: 226 HGYIMRTGLDSDEVVWSALSDMYGKCGSIEEARHIFDKMVDRDIVTWTAMIDRYFQDGRR 285

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           ++ F+L  ++  +G+  + +TF+ +L+  ++  +   G+++H  + + GF+      +AL
Sbjct: 286 KEGFDLFADLLRSGIRPNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASAL 345

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MYS+C N+ +A +VFKE    ++ SWTS+I G+A++G    A+  F  ++  G +P+ 
Sbjct: 346 VHMYSKCGNMVSAERVFKETPQPDLFSWTSLIAGYAQNGQPDEAIRYFELLVKSGTQPDH 405

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           IT++ VLSAC+HAGL+ +G  +F S+ +++G+    +HYAC++DLL RSG   EA   I 
Sbjct: 406 ITFVGVLSACAHAGLVDKGLDYFHSIKEQYGLTHTADHYACIIDLLARSGQFDEAENIIS 465

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
            M +  D  +W + LG CR+HG+ +L + AAE + E +P++PA ++ L+N+YA+AG W  
Sbjct: 466 KMSMKPDKFLWASLLGGCRIHGNLKLAQRAAEALFEIEPENPATYVTLANIYATAGMWSE 525

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           VA IRK M +R ++K+ G SWI     VH F VG+ SHPK+ EI   L +L+ ++KE G+
Sbjct: 526 VAKIRKTMDDRGVVKKPGLSWIAIKRDVHVFLVGDDSHPKSKEINEFLGKLSKRMKEEGF 585

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +PDTNFVLH++E+EQK Q L  HSEK+AVAFG+IST +  PI+VFKNLR C DCHTAIK+
Sbjct: 586 VPDTNFVLHDVEDEQKEQNLSYHSEKLAVAFGIISTPEGTPIKVFKNLRTCVDCHTAIKF 645

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS +T R+I++RDSNRFH  +DG CSC DYW
Sbjct: 646 ISKITNRKIIVRDSNRFHFFEDGHCSCRDYW 676



 Score =  208 bits (530), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 173/593 (29%), Positives = 271/593 (45%), Gaps = 108/593 (18%)

Query: 27  NLPPS-SSPPFIAQPTT---SEPLSNRLIYHL-NDGRVQKAIFTLDLMTQ---------K 72
           NL PS SS PF  QP T   S      L+ HL N  R  +AI  L    +         +
Sbjct: 7   NLKPSHSSSPF--QPKTFFKSNTKDTTLVPHLCNHKRFDEAIHILCQQNRLKEALQILHQ 64

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
            + P    YS L++SCI+SR    GK VH  +  S   P   ILN L+ +Y+KC  L ++
Sbjct: 65  IDKPSASVYSTLIQSCIKSRLLQQGKKVHQHIKLSGFVPGLFILNRLLEMYAKCDSLMDS 124

Query: 133 NKIFKSMGNK------------------------------RDIVSWSSMISSYVNRGKQV 162
            K+F  M  +                              RD  SW++MIS YV   +  
Sbjct: 125 QKLFDEMPERDLCSWNILISGYAKMGLLQEAKSLFDKMPERDNFSWTAMISGYVRHDRPN 184

Query: 163 DAIHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
           +A+ +F  M        N++  S+ + A +    + IG  I+G++++ G  DSD  V  A
Sbjct: 185 EALELFRMMKRSDNSKSNKFTVSSALAAAAAVPCLRIGKEIHGYIMRTG-LDSDEVVWSA 243

Query: 222 LIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           L DM+ K GS+  E A  +FDKM +++ V WT MI R  Q G  ++   LF D++ SG  
Sbjct: 244 LSDMYGKCGSI--EEARHIFDKMVDRDIVTWTAMIDRYFQDGRRKEGFDLFADLLRSGIR 301

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+ FT SGV++AC+       GK++H +  R G         +LV MY+KC   G++  +
Sbjct: 302 PNEFTFSGVLNACANQTSEELGKKVHGYMTRVGFDPFSFAASALVHMYSKC---GNMVSA 358

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            +VF      ++ SWT++I GY Q+G  D EA++ F  +++    P+H TF  VL AC +
Sbjct: 359 ERVFKETPQPDLFSWTSLIAGYAQNGQPD-EAIRYFELLVKSGTQPDHITFVGVLSACAH 417

Query: 401 --LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESLFEKNLVS 456
             L+D  +    Y H++K    L     +   +I + ARSG+ ++A         +N++S
Sbjct: 418 AGLVDKGLD---YFHSIKEQYGLTHTADHYACIIDLLARSGQFDEA---------ENIIS 465

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
             +M                             + +ASLL G    G +    ++  R  
Sbjct: 466 KMSM-------------------------KPDKFLWASLLGGCRIHGNL----KLAQRAA 496

Query: 517 KSGFE---SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI-----SWTSM 561
           ++ FE    N   Y  L ++Y+         ++ K M+DR V+     SW ++
Sbjct: 497 EALFEIEPENPATYVTLANIYATAGMWSEVAKIRKTMDDRGVVKKPGLSWIAI 549


>gi|11994503|dbj|BAB02568.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1161

 Score =  474 bits (1220), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 251/649 (38%), Positives = 389/649 (59%), Gaps = 17/649 (2%)

Query: 222  LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
            LIDM+ K    L  AYKVFD M E+N V W+ +++     G  + ++ LF +M   G  P
Sbjct: 418  LIDMYCKCREPL-MAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYP 476

Query: 282  DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
            + FT S  + AC  L     G Q+H + ++ G  + V VG SLVDMY+KC   G ++++ 
Sbjct: 477  NEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKC---GRINEAE 533

Query: 342  KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA--PNHFTFASVLKACG 399
            KVF R++D +++SW A+I G+V +G   K A+  F  M +  +   P+ FT  S+LKAC 
Sbjct: 534  KVFRRIVDRSLISWNAMIAGFVHAGYGSK-ALDTFGMMQEANIKERPDEFTLTSLLKACS 592

Query: 400  NLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
            +       +Q++   V+ G        +  SL+ +Y + G +  ARKAF+ + EK ++S+
Sbjct: 593  STGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISW 652

Query: 458  NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
            ++++  YA+     +A  L   +++      ++  +S++   +    + +G+Q+ A  +K
Sbjct: 653  SSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVK 712

Query: 518  --SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
              SG E++  + N+++ MY +C  V+ A + F EM+ ++VISWT +ITG+ KHG   +++
Sbjct: 713  LPSGLETS--VLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSV 770

Query: 576  EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
             IFY+ML   I+P+ + Y+AVLSACSH+G+I EG + F  + + HGI  R+EHYAC+VDL
Sbjct: 771  RIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDL 830

Query: 636  LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
            LGR+G L EA   I +MP+  +V +W+T L  CRVHGD ELGK   +++L  D ++PA +
Sbjct: 831  LGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANY 890

Query: 696  ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
            +++SNLY  AG+W    N R+    + L KEAG SW+E + +VH F  GE SHP T  I 
Sbjct: 891  VMMSNLYGQAGYWNEQGNARELGNIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQ 950

Query: 756  AELDQLALKIK-EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS---TSKSKP 811
              L +   +++ E GY+      LH++++E K + L  HSEK+A+   L +     K K 
Sbjct: 951  ETLKEAERRLREELGYVYGLKHELHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKT 1010

Query: 812  IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
            IRVFKNLRVC DCH  IK +S +T    V+RD+ RFH  +DG CSC DY
Sbjct: 1011 IRVFKNLRVCVDCHEFIKGLSKITKIAYVVRDAVRFHSFEDGCCSCGDY 1059



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/504 (28%), Positives = 257/504 (50%), Gaps = 16/504 (3%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N LI +Y KC +   A K+F SM  +R++VSWS+++S +V  G    ++ +F EM
Sbjct: 411 NLITSNYLIDMYCKCREPLMAYKVFDSM-PERNVVSWSALMSGHVLNGDLKGSLSLFSEM 469

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G  PNE+ FS  ++AC     +  G  I+GF LK G F+  V VG +L+DM+ K G 
Sbjct: 470 GRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIG-FEMMVEVGNSLVDMYSKCGR 528

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF--LPDRFTLSG 288
           ++   A KVF ++ +++ + W  MI      G    A+  F  M  +     PD FTL+ 
Sbjct: 529 IN--EAEKVFRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTS 586

Query: 289 VVSACSELELFTSGKQLHSWAIRTGL--ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ++ ACS   +  +GKQ+H + +R+G        +  SLVD+Y KC   G +  +RK FD+
Sbjct: 587 LLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC---GYLFSARKAFDQ 643

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           + +  ++SW+++I GY Q  G   EA+ LF  + +     + F  +S++    +      
Sbjct: 644 IKEKTMISWSSLILGYAQE-GEFVEAMGLFKRLQELNSQIDSFALSSIIGVFADFALLRQ 702

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            +Q+   AVK    L+  V NS++ MY + G +++A K F  +  K+++S+  ++  Y K
Sbjct: 703 GKQMQALAVKLPSGLETSVLNSVVDMYLKCGLVDEAEKCFAEMQLKDVISWTVVITGYGK 762

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHC 525
           +   +K+  + +E+    +      + ++LS  S  G I +GE++ ++++++ G +    
Sbjct: 763 HGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEELFSKLLETHGIKPRVE 822

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            Y  ++ +  R   ++ A  +   M  + NV  W ++++    HG      E+   +L  
Sbjct: 823 HYACVVDLLGRAGRLKEAKHLIDTMPIKPNVGIWQTLLSLCRVHGDIELGKEVGKILLRI 882

Query: 585 GIKPNGITYIAVLSACSHAGLISE 608
             K N   Y+ + +    AG  +E
Sbjct: 883 DAK-NPANYVMMSNLYGQAGYWNE 905



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 219/405 (54%), Gaps = 18/405 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+ +G ++ ++     M ++G +P+  T+S  LK+C        G  +H    +   E  
Sbjct: 453 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 512

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NSL+ +YSKCG +NEA K+F+ + + R ++SW++MI+ +V+ G    A+  F  M 
Sbjct: 513 VEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQ 571

Query: 173 ELGFC--PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-DSDVCVGCALIDMFVKG 229
           E      P+E+  +++++ACS+T  +  G  I+GFL++ G+   S   +  +L+D++VK 
Sbjct: 572 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 631

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              L SA K FD++ EK  + W+ +I    Q G   +A+ LF  +       D F LS +
Sbjct: 632 GY-LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSI 690

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +   ++  L   GKQ+ + A++    L+  V  S+VDMY KC   G VD++ K F  M  
Sbjct: 691 IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC---GLVDEAEKCFAEMQL 747

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT +ITGY +  G  K++V++F +M++  + P+   + +VL AC +       E+
Sbjct: 748 KDVISWTVVITGYGKH-GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 806

Query: 410 VY-----THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           ++     TH +K       CV    + +  R+GR+++A+   +++
Sbjct: 807 LFSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEAKHLIDTM 847



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 64/185 (34%), Positives = 105/185 (56%), Gaps = 2/185 (1%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI MY +      A K F+S+ E+N+VS++ ++  +  N + + +  L  E+   G+ 
Sbjct: 416 NYLIDMYCKCREPLMAYKVFDSMPERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIY 475

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + +TF++ L     + A+ KG QIH   +K GFE    + N+L+ MYS+C  +  A +V
Sbjct: 476 PNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKV 535

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK--PNGITYIAVLSACSHAG 604
           F+ + DR++ISW +MI GF   G+ ++AL+ F  M    IK  P+  T  ++L ACS  G
Sbjct: 536 FRRIVDRSLISWNAMIAGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTG 595

Query: 605 LISEG 609
           +I  G
Sbjct: 596 MIYAG 600


>gi|255539110|ref|XP_002510620.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551321|gb|EEF52807.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 708

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 264/702 (37%), Positives = 409/702 (58%), Gaps = 12/702 (1%)

Query: 75  HP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEA 132
           HP +L +++ L++     ++   G+ +H+ + +     + + L NSLI+ Y+KC  L +A
Sbjct: 4   HPQNLSSFNSLVQ-FTHQKSLQKGRALHAQIIKLASSSSCIYLANSLINFYAKCCHLPKA 62

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA--IHMFVEMLELGFCPNEYCFSAVIRAC 190
             +F  + NK D++SW+ +I+ Y  +G    +  + +F  M      PN + FS +  A 
Sbjct: 63  KLVFDRIHNK-DVISWNCLINGYSQQGPTGSSFVMELFQRMRADNILPNAHTFSGIFTAA 121

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
           SN  ++  G   +   +K   F  DV VG +L++M+ K  +  E A +VFD+M E+N V 
Sbjct: 122 SNLSSIFFGQQAHAVAIKMACF-YDVFVGSSLLNMYCKAGLLFE-AREVFDRMPERNEVT 179

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  MI+         +A  +F  M       + F  + V+SA +  E   SGKQ+H  A+
Sbjct: 180 WATMISGYAIQRLAGEAFEVFELMRREEEDVNEFAFTSVLSALAVPEFVDSGKQIHCLAV 239

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           +TGL + + +  +LV MYAKC   GS+DDS +VF+   D N ++W+A+ITGY QSG   K
Sbjct: 240 KTGLLVFLSILNALVTMYAKC---GSLDDSLQVFEMSNDKNSITWSAMITGYAQSGDSHK 296

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
            A+KLFS M    + P+ FT   VL AC +       +QV+ + +K G      +  +L+
Sbjct: 297 -ALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQLYIMTALV 355

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            MYA+SG  EDARK F  L + +LV + +M+  Y +N  +E A  L   ++  G+  +  
Sbjct: 356 DMYAKSGVTEDARKGFNYLQQPDLVLWTSMIAGYVQNGENEDALSLYCRMQMEGILPNEL 415

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           T AS+L   S++ A  +G QIHAR IK G      I +AL +MY++C N+E    VF+ M
Sbjct: 416 TMASVLKACSNLAAFDQGRQIHARTIKYGLGLEVTIGSALSTMYAKCGNLEEGNIVFRRM 475

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
            +R++ISW +MI+G +++G+   ALE+F +M     KP+ +T++ VLSACSH GL+  GW
Sbjct: 476 PERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSACSHMGLVDSGW 535

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
            +FR M+DE G++ ++EHYACMVD+L R+G L EA EFI S  +   + +WR  LGACR 
Sbjct: 536 LYFRMMFDEFGLLPKVEHYACMVDVLSRAGKLYEAKEFIESTTIDHGLCLWRILLGACRN 595

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           + + ELG +A E ++E   Q+ +A++LLS +Y + G  E V  +R  MK R + KE GCS
Sbjct: 596 YRNYELGAYAGEKLMELGSQESSAYVLLSGIYTALGRPEDVERVRSMMKVRGVSKEPGCS 655

Query: 731 WIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           WIE  + VH F VG+  HP   EI  E+ +L+ ++K+ GY P
Sbjct: 656 WIELKSNVHVFVVGDQMHPCIGEIRTEILRLSKQMKDEGYQP 697



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/250 (32%), Positives = 125/250 (50%), Gaps = 3/250 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G   KA+     M   G +P   T   +L +C  +     GK VH+ L +   E  
Sbjct: 288 YAQSGDSHKALKLFSRMHFAGINPSEFTLVGVLNACSDACAVEEGKQVHNYLLKLGFESQ 347

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+ +L+ +Y+K G   +A K F  +  + D+V W+SMI+ YV  G+  DA+ ++  M 
Sbjct: 348 LYIMTALVDMYAKSGVTEDARKGFNYL-QQPDLVLWTSMIAGYVQNGENEDALSLYCRMQ 406

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PNE   ++V++ACSN      G  I+   +K G    +V +G AL  M+ K   +
Sbjct: 407 MEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYG-LGLEVTIGSALSTMYAKCG-N 464

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LE    VF +M E++ + W  MI+  +Q G  ++A+ LF +M      PD  T   V+SA
Sbjct: 465 LEEGNIVFRRMPERDIISWNAMISGLSQNGYGKEALELFEEMRQQDTKPDDVTFVNVLSA 524

Query: 293 CSELELFTSG 302
           CS + L  SG
Sbjct: 525 CSHMGLVDSG 534



 Score = 77.0 bits (188), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 81/151 (53%), Gaps = 1/151 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G  + A+     M  +G  P+  T + +LK+C     F  G+ +H+   +  L   
Sbjct: 389 YVQNGENEDALSLYCRMQMEGILPNELTMASVLKACSNLAAFDQGRQIHARTIKYGLGLE 448

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I ++L ++Y+KCG+L E N +F+ M  +RDI+SW++MIS     G   +A+ +F EM 
Sbjct: 449 VTIGSALSTMYAKCGNLEEGNIVFRRM-PERDIISWNAMISGLSQNGYGKEALELFEEMR 507

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           +    P++  F  V+ ACS+   V  G + +
Sbjct: 508 QQDTKPDDVTFVNVLSACSHMGLVDSGWLYF 538


>gi|356544848|ref|XP_003540859.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Glycine max]
          Length = 701

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/629 (39%), Positives = 379/629 (60%), Gaps = 7/629 (1%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +FD++  KN+  W  MI        P  A+ L+L M+  G  PD FT   V+ AC +
Sbjct: 77  AQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGD 136

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L L   G+++H+  +  GL  DV VG S++ MY K    G V+ +R VFDRML  ++ SW
Sbjct: 137 LLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKF---GDVEAARVVFDRMLVRDLTSW 193

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
             +++G+V++G   + A ++F DM +     +  T  ++L ACG+++D  V ++++ + V
Sbjct: 194 NTMMSGFVKNG-EARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVV 252

Query: 416 KRGRALDDCVG---NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + G +   C G   NS+I MY     +  ARK FE L  K++VS+N+++  Y K  ++ +
Sbjct: 253 RNGESGRVCNGFLMNSIIDMYCNCESVSCARKLFEGLRVKDVVSWNSLISGYEKCGDAFQ 312

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A EL   +   G      T  S+L+  + I A+  G  + + ++K G+  N  +  ALI 
Sbjct: 313 ALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIG 372

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY+ C ++  A +VF EM ++N+ + T M+TGF  HG    A+ IFY+ML  G+ P+   
Sbjct: 373 MYANCGSLVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGI 432

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           + AVLSACSH+GL+ EG + F  M  ++ +  R  HY+C+VDLLGR+G L EA   I +M
Sbjct: 433 FTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENM 492

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
            L  +  VW   L ACR+H + +L   +A+ + E +P   + ++ LSN+YA+   WE V 
Sbjct: 493 KLKPNEDVWTALLSACRLHRNVKLAVISAQKLFELNPDGVSGYVCLSNIYAAERRWEDVE 552

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           N+R  + +R L K    S++E +  VH+F VG+TSH ++ +IYA+L  L  ++K+ GY P
Sbjct: 553 NVRALVAKRRLRKPPSYSFVELNKMVHQFFVGDTSHEQSDDIYAKLKDLNEQLKKAGYKP 612

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           DT+ VL+++EEE K + L+ HSE++A+AF LI+T     IR+ KNLRVCGDCHT IK IS
Sbjct: 613 DTSLVLYDVEEEIKEKMLWDHSERLALAFALINTGPGTTIRITKNLRVCGDCHTVIKMIS 672

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +T REI++RD  RFHH +DG CSC  YW
Sbjct: 673 KLTNREIIMRDICRFHHFRDGLCSCGGYW 701



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 263/521 (50%), Gaps = 15/521 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           LL+S   S++      +H+ + T   L  N+ +   L + Y+ CG +  A  IF  +  K
Sbjct: 28  LLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIVLK 87

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
              + W+SMI  Y        A+ ++++ML  G  P+ + +  V++AC +     +G  +
Sbjct: 88  NSFL-WNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKV 146

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  L+  G  + DV VG +++ M+ K   D+E+A  VFD+M  ++   W  M++   + G
Sbjct: 147 HA-LVVVGGLEEDVYVGNSILSMYFKFG-DVEAARVVFDRMLVRDLTSWNTMMSGFVKNG 204

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             R A  +F DM   GF+ DR TL  ++SAC ++     GK++H + +R G +  VC G 
Sbjct: 205 EARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRVCNGF 264

Query: 323 ---SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
              S++DMY  C    SV  +RK+F+ +   +V+SW ++I+GY +  G   +A++LF  M
Sbjct: 265 LMNSIIDMYCNCE---SVSCARKLFEGLRVKDVVSWNSLISGY-EKCGDAFQALELFGRM 320

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           +     P+  T  SVL AC  +    +   V ++ VKRG  ++  VG +LI MYA  G +
Sbjct: 321 VVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVGTALIGMYANCGSL 380

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             A + F+ + EKNL +   MV  +  +    +A  + +E+   GV      F ++LS  
Sbjct: 381 VCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSAC 440

Query: 500 SSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVIS 557
           S  G + +G++I  ++ +    E     Y+ L+ +  R   ++ A+ V + M+ + N   
Sbjct: 441 SHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENMKLKPNEDV 500

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           WT++++    H     A+    K+    + P+G++    LS
Sbjct: 501 WTALLSACRLHRNVKLAVISAQKLFE--LNPDGVSGYVCLS 539



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 212/394 (53%), Gaps = 13/394 (3%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+F    M   G  PD  TY  +LK+C       +G+ VH+L+    LE +  + NS++
Sbjct: 107 RALFLYLKMLHFGQKPDNFTYPFVLKACGDLLLREMGRKVHALVVVGGLEEDVYVGNSIL 166

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           S+Y K GD+  A  +F  M   RD+ SW++M+S +V  G+   A  +F +M   GF  + 
Sbjct: 167 SMYFKFGDVEAARVVFDRM-LVRDLTSWNTMMSGFVKNGEARGAFEVFGDMRRDGFVGDR 225

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC---ALIDMFVKGSVDLESAY 237
               A++ AC +  ++ +G  I+G++++ G     VC G    ++IDM+      +  A 
Sbjct: 226 TTLLALLSACGDVMDLKVGKEIHGYVVRNGE-SGRVCNGFLMNSIIDMYCNCE-SVSCAR 283

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           K+F+ +  K+ V W  +I+   + G    A+ LF  M++ G +PD  T+  V++AC+++ 
Sbjct: 284 KLFEGLRVKDVVSWNSLISGYEKCGDAFQALELFGRMVVVGAVPDEVTVISVLAACNQIS 343

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G  + S+ ++ G  ++V VG +L+ MYA C   GS+  + +VFD M + N+ + T 
Sbjct: 344 ALRLGATVQSYVVKRGYVVNVVVGTALIGMYANC---GSLVCACRVFDEMPEKNLPACTV 400

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           ++TG+    GR +EA+ +F +M+   V P+   F +VL AC +    +  ++++ + + R
Sbjct: 401 MVTGF-GIHGRGREAISIFYEMLGKGVTPDEGIFTAVLSACSHSGLVDEGKEIF-YKMTR 458

Query: 418 GRALDDCVG--NSLISMYARSGRMEDARKAFESL 449
             +++      + L+ +  R+G +++A    E++
Sbjct: 459 DYSVEPRPTHYSCLVDLLGRAGYLDEAYAVIENM 492



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 96/317 (30%), Positives = 158/317 (49%), Gaps = 21/317 (6%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR---SKLE 110
           + +G  + A      M + G   D  T   LL +C    +  +GK +H  + R   S   
Sbjct: 201 VKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSACGDVMDLKVGKEIHGYVVRNGESGRV 260

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            N  ++NS+I +Y  C  ++ A K+F+ +   +D+VSW+S+IS Y   G    A+ +F  
Sbjct: 261 CNGFLMNSIIDMYCNCESVSCARKLFEGL-RVKDVVSWNSLISGYEKCGDAFQALELFGR 319

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M+ +G  P+E    +V+ AC+    + +G  +  +++K GY   +V VG ALI M+   G
Sbjct: 320 MVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYV-VNVVVGTALIGMYANCG 378

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  L  A +VFD+M EKN    T+M+T     G  R+AI +F +M+  G  PD    + V
Sbjct: 379 S--LVCACRVFDEMPEKNLPACTVMVTGFGIHGRGREAISIFYEMLGKGVTPDEGIFTAV 436

Query: 290 VSACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           +SACS   L   GK++       +++        C    LVD+  +    G +D++  V 
Sbjct: 437 LSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSC----LVDLLGRA---GYLDEAYAVI 489

Query: 345 DRM-LDHNVMSWTAIIT 360
           + M L  N   WTA+++
Sbjct: 490 ENMKLKPNEDVWTALLS 506



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/219 (31%), Positives = 109/219 (49%), Gaps = 10/219 (4%)

Query: 390 TFASVLKACGNLLDS-------NVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMED 441
           TF S+   CG LL S         A Q++ H    G    +  +   L + YA  G M  
Sbjct: 19  TFDSL--QCGTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPY 76

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A+  F+ +  KN   +N+M+  YA N +  +A  L  ++   G     +T+  +L     
Sbjct: 77  AQHIFDQIVLKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGD 136

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +     G ++HA ++  G E +  + N+++SMY +  +VEAA  VF  M  R++ SW +M
Sbjct: 137 LLLREMGRKVHALVVVGGLEEDVYVGNSILSMYFKFGDVEAARVVFDRMLVRDLTSWNTM 196

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           ++GF K+G A  A E+F  M  DG   +  T +A+LSAC
Sbjct: 197 MSGFVKNGEARGAFEVFGDMRRDGFVGDRTTLLALLSAC 235



 Score = 73.6 bits (179), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M   G  PD  T   +L +C +     LG  V S + +     N V+ 
Sbjct: 308 GDAFQALELFGRMVVVGAVPDEVTVISVLAACNQISALRLGATVQSYVVKRGYVVNVVVG 367

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +LI +Y+ CG L  A ++F  M  K ++ + + M++ +   G+  +AI +F EML  G 
Sbjct: 368 TALIGMYANCGSLVCACRVFDEMPEK-NLPACTVMVTGFGIHGRGREAISIFYEMLGKGV 426

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+E  F+AV+ ACS++  V  G  I+  + +    +        L+D+  +    L+ A
Sbjct: 427 TPDEGIFTAVLSACSHSGLVDEGKEIFYKMTRDYSVEPRPTHYSCLVDLLGRAGY-LDEA 485

Query: 237 YKVFDKMTEK-NTVGWTLMITRC 258
           Y V + M  K N   WT +++ C
Sbjct: 486 YAVIENMKLKPNEDVWTALLSAC 508



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%), Gaps = 13/192 (6%)

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            +LL   ++  ++ +  Q+HA +   G    N  +   L + Y+ C ++  A  +F ++ 
Sbjct: 26  GTLLQSLTNSKSLTQALQLHAHVTTGGTLRRNTYLATKLAACYAVCGHMPYAQHIFDQIV 85

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            +N   W SMI G+A +   +RAL ++ KML  G KP+  TY  VL AC    L+ E  +
Sbjct: 86  LKNSFLWNSMIRGYACNNSPSRALFLYLKMLHFGQKPDNFTYPFVLKACGDL-LLREMGR 144

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL------ 665
              ++    G+ + +     ++ +  + G + EA   +    L  D+  W T +      
Sbjct: 145 KVHALVVVGGLEEDVYVGNSILSMYFKFGDV-EAARVVFDRMLVRDLTSWNTMMSGFVKN 203

Query: 666 ----GACRVHGD 673
               GA  V GD
Sbjct: 204 GEARGAFEVFGD 215


>gi|240255401|ref|NP_189042.4| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332643322|gb|AEE76843.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 665

 Score =  473 bits (1218), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 230/576 (39%), Positives = 363/576 (63%), Gaps = 6/576 (1%)

Query: 279 FLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           ++P DR   + ++  C+  +L   G+ +H+  +++    D+ +G +L++MYAKC   GS+
Sbjct: 55  YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC---GSL 111

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +++RKVF++M   + ++WT +I+GY Q   R  +A+  F+ M++   +PN FT +SV+KA
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHD-RPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
                      Q++   VK G   +  VG++L+ +Y R G M+DA+  F++L  +N VS+
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N ++  +A+   +EKA EL   +   G   S +++ASL    SS G + +G+ +HA +IK
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           SG +      N L+ MY++  ++  A ++F  +  R+V+SW S++T +A+HGF   A+  
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M   GI+PN I++++VL+ACSH+GL+ EGW H+  +  + GIV    HY  +VDLLG
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW-HYYELMKKDGIVPEAWHYVTVVDLLG 409

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L  AL FI  MP+     +W+  L ACR+H +TELG +AAE + E DP DP  H++
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           L N+YAS G W   A +RK+MKE  + KE  CSW+E +N +H F   +  HP+  EI  +
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            +++  KIKE GY+PDT+ V+  ++++++   L  HSEKIA+AF L++T     I + KN
Sbjct: 530 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 589

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           +RVCGDCHTAIK  S V GREI++RD+NRFHH KD 
Sbjct: 590 IRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDA 625



 Score =  232 bits (591), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 134/398 (33%), Positives = 219/398 (55%), Gaps = 12/398 (3%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D   Y+ LLK C   +    G++VH+ + +S    + V+ N+L+++Y+KCG L EA K+F
Sbjct: 59  DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
           + M  +RD V+W+++IS Y    +  DA+  F +ML  G+ PNE+  S+VI+A +     
Sbjct: 119 EKM-PQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             GH ++GF +KCG FDS+V VG AL+D++ +  + ++ A  VFD +  +N V W  +I 
Sbjct: 178 CCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGL-MDDAQLVFDALESRNDVSWNALIA 235

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              +      A+ LF  M+  GF P  F+ + +  ACS       GK +H++ I++G  L
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
               G +L+DMYAK    GS+ D+RK+FDR+   +V+SW +++T Y Q G   KEAV  F
Sbjct: 296 VAFAGNTLLDMYAK---SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF-GKEAVWWF 351

Query: 377 SDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            +M +  + PN  +F SVL AC +  LLD       Y    K G   +     +++ +  
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDE--GWHYYELMKKDGIVPEAWHYVTVVDLLG 409

Query: 435 RSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
           R+G +  A +  E +  E     +  +++A   + N+E
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/428 (29%), Positives = 230/428 (53%), Gaps = 13/428 (3%)

Query: 172 LELGFCPNEYCF-SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           LE  + P +  F + +++ C+  + +  G I++  +L+   F  D+ +G  L++M+ K G
Sbjct: 51  LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQ-SIFRHDIVMGNTLLNMYAKCG 109

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  LE A KVF+KM +++ V WT +I+  +Q   P DA+  F  M+  G+ P+ FTLS V
Sbjct: 110 S--LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + A +       G QLH + ++ G   +V VG +L+D+Y +    G +DD++ VFD +  
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY---GLMDDAQLVFDALES 224

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            N +SW A+I G+ +  G +K A++LF  M++    P+HF++AS+  AC +       + 
Sbjct: 225 RNDVSWNALIAGHARRSGTEK-ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+ + +K G  L    GN+L+ MYA+SG + DARK F+ L ++++VS+N+++ AYA++  
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            ++A     E+   G+  +  +F S+L+  S  G + +G   +  + K G       Y  
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADG 585
           ++ +  R  ++  A +  +EM  +     W +++     H      A A E  +++  D 
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463

Query: 586 IKPNGITY 593
             P+ I Y
Sbjct: 464 PGPHVILY 471



 Score = 89.4 bits (220), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 60/217 (27%), Positives = 107/217 (49%), Gaps = 9/217 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H      +KA+     M + G  P   +Y+ L  +C  +     GK VH+ + +S  +  
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +   N+L+ +Y+K G +++A KIF  +  KRD+VSW+S++++Y   G   +A+  F EM 
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            +G  PNE  F +V+ ACS++  +  G   Y  + K G    +      ++D+  +   D
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAG-D 413

Query: 233 LESAYKVFDKMTEKNTVG-WTLMITRC-----TQLGC 263
           L  A +  ++M  + T   W  ++  C     T+LG 
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGA 450



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 34/281 (12%)

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
           +++E + +      + +LL   +    + +G  +HA I++S F  +  + N L++MY++C
Sbjct: 49  NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            ++E A +VF++M  R+ ++WT++I+G+++H     AL  F +ML  G  PN  T  +V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168

Query: 598 SACS-----------HAGLISEGWK---HFRS----MYDEHGIVQRME------------ 627
            A +           H   +  G+    H  S    +Y  +G++   +            
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228

Query: 628 HYACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDTELGKHA-AEM 683
            +  ++    R     +ALE  + M           + +  GAC   G  E GK   A M
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           I   +     A   L ++YA +G       I  R+ +R+++
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329


>gi|449440387|ref|XP_004137966.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/770 (35%), Positives = 435/770 (56%), Gaps = 21/770 (2%)

Query: 14  PPSSFKPSNPS--------RQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFT 65
           P SS K   P         R N   + SP      T   P  +++I        ++A+  
Sbjct: 28  PTSSIKNFKPQLHLALSHIRLNTQLAFSP---CPLTVHYPHDDKIISLCKKNLHREALKA 84

Query: 66  LDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            D+  +  + P    TY+ L+ +C   R+   G+ +H  +     +P+ ++ N ++S+Y 
Sbjct: 85  FDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYG 144

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KCG L EA  +F SM  K ++VSW+SMIS Y   G++ +AI ++V+ML  G  P+ + F 
Sbjct: 145 KCGSLKEARNMFDSMPLK-NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFG 203

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +++++CS  ++  +   ++  +LK   F +D+    ALI M+ K S  +  A  VF ++ 
Sbjct: 204 SIVKSCSGLDDFKLARQLHAHVLK-SEFGADLIAQNALISMYTKFS-QMADAINVFSRII 261

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGK 303
            K+ + W  MI   +QLG   +A+  F +M+  S + P+ F      SACS+L     G+
Sbjct: 262 IKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGR 321

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H   I+ GL  D+  GCSL DMYAKC   G ++ +R VF  +   ++++W AII G+ 
Sbjct: 322 QIHGLCIKFGLGSDLFAGCSLCDMYAKC---GFLESARTVFYHIEKPDLVAWNAIIAGFA 378

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            S    KE+   FS M    + PN  T  S+L AC   +  N   QV+++ VK G  LD 
Sbjct: 379 -SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDI 437

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
            V NSL+SMY++   + DA + FE +  K ++VS+NT++ A  +   + +   L   +  
Sbjct: 438 PVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA 497

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           + +     T  ++L  +  I +   G QIH  I+KSG   +  + NALI+MY++C ++E 
Sbjct: 498 SRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLEC 557

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A ++F  + + ++ISW+S+I G+A+ G    A E+F  M   G+KPN IT++ +L+ACSH
Sbjct: 558 ARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSH 617

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
            G++ EG K +R+M +++ I    EH +CMVDLL R+G L  A +FI+ MP   DV+VW+
Sbjct: 618 IGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIKQMPFVPDVVVWK 677

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
           T L AC+VHG+ E+GK AAE +L+ DP + AA ++L N++AS+GHW+  A +R  M+  +
Sbjct: 678 TLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMD 737

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           + K  G SWIE  +KVH F   +  HP+  +IY  L++L L+I + G  P
Sbjct: 738 VGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQILDDGCDP 787


>gi|449518693|ref|XP_004166371.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Cucumis sativus]
          Length = 792

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 269/763 (35%), Positives = 432/763 (56%), Gaps = 21/763 (2%)

Query: 14  PPSSFKPSNPS--------RQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFT 65
           P SS K   P         R N   + SP      T   P  +++I        ++A+  
Sbjct: 28  PTSSIKNFKPQLHLALSHIRLNTQLAFSP---CPLTVHYPHDDKIISLCKKNLHREALKA 84

Query: 66  LDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            D+  +  + P    TY+ L+ +C   R+   G+ +H  +     +P+ ++ N ++S+Y 
Sbjct: 85  FDIFQKCSSSPLKSVTYTHLINACSSLRSLEHGRKIHRHMLTCNYQPDMILQNHILSMYG 144

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KCG L EA  +F SM  K ++VSW+SMIS Y   G++ +AI ++V+ML  G  P+ + F 
Sbjct: 145 KCGSLKEARNMFDSMPLK-NVVSWTSMISGYSRYGEEDNAITLYVQMLRSGHIPDHFTFG 203

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           +++++CS  ++  +   ++  +LK   F +D+    ALI M+ K S  +  A  VF ++ 
Sbjct: 204 SIVKSCSGLDDFKLARQLHAHVLK-SEFGADLIAQNALISMYTKFS-QMADAINVFSRII 261

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGK 303
            K+ + W  MI   +QLG   +A+  F +M+  S + P+ F      SACS+L     G+
Sbjct: 262 IKDLISWGSMIAGFSQLGYELEALCHFREMLSQSVYQPNEFVFGSAFSACSKLLEPDCGR 321

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H   I+ GL  D+  GCSL DMYAKC   G ++ +R VF  +   ++++W AII G+ 
Sbjct: 322 QIHGLCIKFGLGSDLFAGCSLCDMYAKC---GFLESARTVFYHIEKPDLVAWNAIIAGFA 378

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            S    KE+   FS M    + PN  T  S+L AC   +  N   QV+++ VK G  LD 
Sbjct: 379 -SVSNAKESSSFFSQMRHTGLVPNDVTVLSLLCACSEPVMLNHGIQVHSYIVKMGFNLDI 437

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
            V NSL+SMY++   + DA + FE +  K ++VS+NT++ A  +   + +   L   +  
Sbjct: 438 PVCNSLLSMYSKCSNLNDALQVFEDIGNKADIVSWNTLLTACLQQNQAGEVLRLTKLMFA 497

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           + +     T  ++L  +  I +   G QIH  I+KSG   +  + NALI+MY++C ++E 
Sbjct: 498 SRIKPDHVTLTNVLVSSGQIASYEVGSQIHCFIMKSGLNLDISVSNALINMYTKCGSLEC 557

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A ++F  + + ++ISW+S+I G+A+ G    A E+F  M   G+KPN IT++ +L+ACSH
Sbjct: 558 ARKMFDSIGNPDIISWSSLIVGYAQAGCGKEAFELFRTMRGLGVKPNEITFVGILTACSH 617

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
            G++ EG K +R+M +++ I    EH +CMVDLL R+G L  A +FIR MP   DV+VW+
Sbjct: 618 IGMVEEGLKLYRTMQEDYRISPTKEHCSCMVDLLARAGCLDVAEDFIRQMPFVPDVVVWK 677

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
           T L AC+VHG+ E+GK AAE +L+ DP + AA ++L N++AS+GHW+  A +R  M+  +
Sbjct: 678 TLLAACKVHGNLEVGKRAAENVLKIDPSNSAAVVMLCNIHASSGHWKDFARLRSSMRRMD 737

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           + K  G SWIE  +KVH F   +  HP+  +IY  L++L L+I
Sbjct: 738 VGKVPGQSWIEIKDKVHVFLAEDNLHPERGKIYTMLEELMLQI 780


>gi|224080660|ref|XP_002306200.1| predicted protein [Populus trichocarpa]
 gi|222849164|gb|EEE86711.1| predicted protein [Populus trichocarpa]
          Length = 784

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 276/755 (36%), Positives = 417/755 (55%), Gaps = 30/755 (3%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           PN + +   +  + + G +  A  +F+ M N  D   W+ +I  Y N G   +AI  +  
Sbjct: 56  PNDLNITRDLCGFVESGLMGNALDMFEKM-NHSDTFIWNVIIRGYTNNGLFQEAIDFYYR 114

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M   G   + + F  VI+AC     + +G  ++G L+K G FD DV V   LIDM++K  
Sbjct: 115 MECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIG-FDLDVYVCNFLIDMYLKIG 173

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +E A KVFD+M  ++ V W  M++     G    ++  F +M+  G   DRF +   +
Sbjct: 174 F-IELAEKVFDEMPVRDLVSWNSMVSGYQIDGDGLSSLMCFKEMLRLGNKADRFGMISAL 232

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            ACS      SG ++H   IR+ L LD+ V  SL+DMY KC   G VD + +VF+R+   
Sbjct: 233 GACSIEHCLRSGMEIHCQVIRSELELDIMVQTSLIDMYGKC---GKVDYAERVFNRIYSK 289

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVA 407
           N+++W A+I G  +                  +V P+  T  ++L +C   G LL+    
Sbjct: 290 NIVAWNAMIGGMQE----------------DDKVIPDVITMINLLPSCSQSGALLE---G 330

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           + ++  A+++       +  +L+ MY + G ++ A   F  + EKN+VS+NTMV AY +N
Sbjct: 331 KSIHGFAIRKMFLPYLVLETALVDMYGKCGELKLAEHVFNQMNEKNMVSWNTMVAAYVQN 390

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              ++A ++   I +  +   A T AS+L   + + +  +G+QIH+ I+K G  SN  I 
Sbjct: 391 EQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIHSYIMKLGLGSNTFIS 450

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           NA++ MY++C +++ A + F  M  ++V+SW +MI  +A HGF   +++ F +M   G K
Sbjct: 451 NAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGRTSIQFFSEMRGKGFK 510

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           PNG T++++L+ACS +GLI EGW  F SM  E+GI   +EHY CM+DLLGR+G+L EA  
Sbjct: 511 PNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCMLDLLGRNGNLDEAKC 570

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
           FI  MPL     +W + L A R H D  L + AA  IL     +   ++LLSN+YA AG 
Sbjct: 571 FIEEMPLVPTARIWGSLLAASRNHNDVVLAELAARHILSLKHDNTGCYVLLSNMYAEAGR 630

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           WE V  I+  MKE+ L+K  GCS ++ + +   F   + SH  T  IY  LD L  KI E
Sbjct: 631 WEDVDRIKYLMKEQGLVKTVGCSMVDINGRSESFINQDRSHAHTNLIYDVLDILLKKIGE 690

Query: 768 FGYLPD-TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             YL   T F   ++ +++     + HS K+A+ FGLIST+   P+ V KN R+C DCH 
Sbjct: 691 DIYLHSLTKFRPLDVAKKRGNSPEY-HSVKLAICFGLISTAIGNPVIVRKNTRICDDCHR 749

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A K IS VT REIV+ D+  FHH +DG CSC DYW
Sbjct: 750 AAKKISQVTKREIVVGDAKVFHHFRDGCCSCRDYW 784



 Score =  213 bits (542), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 167/594 (28%), Positives = 289/594 (48%), Gaps = 32/594 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + N+G  Q+AI     M  +G   D  T+  ++K+C       +G+ VH  L +   + +
Sbjct: 99  YTNNGLFQEAIDFYYRMECEGIRSDNFTFPFVIKACGELLALMVGQKVHGKLIKIGFDLD 158

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N LI +Y K G +  A K+F  M   RD+VSW+SM+S Y   G  + ++  F EML
Sbjct: 159 VYVCNFLIDMYLKIGFIELAEKVFDEM-PVRDLVSWNSMVSGYQIDGDGLSSLMCFKEML 217

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
            LG   + +   + + ACS    +  G  I+  +++    + D+ V  +LIDM+ K G V
Sbjct: 218 RLGNKADRFGMISALGACSIEHCLRSGMEIHCQVIR-SELELDIMVQTSLIDMYGKCGKV 276

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A +VF+++  KN V W  MI      G   D             +PD  T+  ++ 
Sbjct: 277 DY--AERVFNRIYSKNIVAWNAMIG-----GMQED----------DKVIPDVITMINLLP 319

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +CS+      GK +H +AIR      + +  +LVDMY KC   G +  +  VF++M + N
Sbjct: 320 SCSQSGALLEGKSIHGFAIRKMFLPYLVLETALVDMYGKC---GELKLAEHVFNQMNEKN 376

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SW  ++  YVQ+  + KEA+K+F  ++   + P+  T ASVL A   L   +  +Q++
Sbjct: 377 MVSWNTMVAAYVQN-EQYKEALKMFQHILNEPLKPDAITIASVLPAVAELASRSEGKQIH 435

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
           ++ +K G   +  + N+++ MYA+ G ++ AR+ F+ +  K++VS+NTM+ AYA +    
Sbjct: 436 SYIMKLGLGSNTFISNAIVYMYAKCGDLQTAREFFDGMVCKDVVSWNTMIMAYAIHGFGR 495

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNAL 530
            + +   E+   G   +  TF SLL+  S  G I +G      + ++ G +     Y  +
Sbjct: 496 TSIQFFSEMRGKGFKPNGSTFVSLLTACSISGLIDEGWGFFNSMKVEYGIDPGIEHYGCM 555

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + +  R  N++ A    +EM        W S++     H     A E+  + +      N
Sbjct: 556 LDLLGRNGNLDEAKCFIEEMPLVPTARIWGSLLAASRNHNDVVLA-ELAARHILSLKHDN 614

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC-MVDLLGRSGSL 642
              Y+ + +  + AG   E     + +  E G+V+ +    C MVD+ GRS S 
Sbjct: 615 TGCYVLLSNMYAEAGRW-EDVDRIKYLMKEQGLVKTV---GCSMVDINGRSESF 664


>gi|414884091|tpg|DAA60105.1| TPA: hypothetical protein ZEAMMB73_697281 [Zea mays]
          Length = 734

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/662 (37%), Positives = 380/662 (57%), Gaps = 34/662 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI--LSGFLPDRFTLSGVV 290
           L +A++VFD    ++   WT +I+ C + G   D +R F +M+       P+ F L+GV+
Sbjct: 74  LHNAHRVFDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVL 133

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK-------------------- 330
             C+ L    SG+++H W +R+G+  DV +  +++DMYAK                    
Sbjct: 134 RCCAGLGDVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDAT 193

Query: 331 --------CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
                   C  DG +  + ++FD     +V SW  I++G ++  G   EA+     M++ 
Sbjct: 194 SWNIVIRACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRH-GHTTEALGRLQQMVRA 252

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V  +++T++ V    G L   ++  Q++   V      D  VG SL+ MY + G ME A
Sbjct: 253 GVTFSNYTYSMVFALAGLLSSRDLGRQLHGRVVVAVLEEDAFVGCSLMDMYCKCGEMESA 312

Query: 443 RKAFE---SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
              F+      E    +++TMV  Y +N   E+A E    +   GV    +   S+ S  
Sbjct: 313 LSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASAC 372

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           ++ G + +G Q+H  + K G   +  + +A++ MYS+  ++E A ++F+  + +NV  WT
Sbjct: 373 ANAGMVEQGRQVHGFVEKLGHRFDAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWT 432

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +M+  +A HG    ALEIF +M A+ I PN IT +AVLSACSH+GL+S+G+ +F  M +E
Sbjct: 433 TMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEE 492

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           +GIV   EHY CMVDL GR+G L +A  FI    +S + +VW+T L ACR+H   E  + 
Sbjct: 493 YGIVPNTEHYNCMVDLYGRAGLLDKAKNFIEENKISHEAVVWKTLLSACRLHKHIEYAQL 552

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           A+E +++ +  D  +++L+SN+YA+   W     +R  MKER + K+ G SWI   N VH
Sbjct: 553 ASEKLVQLEQYDAGSYVLMSNMYATNNKWLDTFKLRSSMKERRVRKQPGQSWIHLKNVVH 612

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F   +TSHP++ EIYA L++L  ++KE GY   T+ V+H++EEEQ+   L  HSEK+A+
Sbjct: 613 RFVALDTSHPRSAEIYAYLEKLMERLKEMGYTSRTDLVVHDIEEEQRETSLKFHSEKLAI 672

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFG+IST     +R+FKNLRVC DCH AIK+I+  T REIV+RD  RFHH KDG+CSC D
Sbjct: 673 AFGIISTPVGTALRIFKNLRVCEDCHEAIKFITRATDREIVVRDLYRFHHFKDGQCSCED 732

Query: 860 YW 861
           +W
Sbjct: 733 FW 734



 Score =  179 bits (453), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 135/509 (26%), Positives = 227/509 (44%), Gaps = 55/509 (10%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           K +H    R  +  +SVI   L          + A+++F      R + +W+S+IS    
Sbjct: 53  KAIHRQSVRGCVPSSSVIARGL----------HNAHRVFDGTPT-RSLPAWTSIISGCAR 101

Query: 158 RGKQVDAIHMFVEML-ELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
            G+  D +  F EML E G   PN +  + V+R C+   +V  G  I+G++L+ G    D
Sbjct: 102 EGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLGDVESGRRIHGWILRSGVC-PD 160

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD-- 273
           V +  A++DM+ K   D   A + F  M +K+   W ++I  C Q G    A +LF +  
Sbjct: 161 VVLCNAVLDMYAKCG-DHGRARRAFGAMAQKDATSWNIVIRACLQDGDLVGATQLFDESS 219

Query: 274 -----------------------------MILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
                                        M+ +G     +T S V +    L     G+Q
Sbjct: 220 LRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRDLGRQ 279

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN---VMSWTAIITG 361
           LH   +   L  D  VGCSL+DMY KC   G ++ +  +FDR  D       +W+ ++ G
Sbjct: 280 LHGRVVVAVLEEDAFVGCSLMDMYCKC---GEMESALSIFDRWSDFTEDRQFAWSTMVAG 336

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           YVQ+ GR++EA++ F  M++  V    F   SV  AC N        QV+    K G   
Sbjct: 337 YVQN-GREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRF 395

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  + ++++ MY++SG +EDA + F S   KN+  + TM+ +YA +     A E+   ++
Sbjct: 396 DAPLASAIVDMYSKSGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMK 455

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANV 540
              +  +  T  ++LS  S  G +  G      + +  G   N   YN ++ +Y R   +
Sbjct: 456 AEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRAGLL 515

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKH 568
           + A    +E +     + W ++++    H
Sbjct: 516 DKAKNFIEENKISHEAVVWKTLLSACRLH 544



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 117/469 (24%), Positives = 214/469 (45%), Gaps = 59/469 (12%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQK--GNHPDLDTYSLLLKSCIRSR 92
           F   PT S P    +I     +GR    +     M  +     P+    + +L+ C    
Sbjct: 81  FDGTPTRSLPAWTSIISGCAREGRHADGMRAFAEMLDECGATAPNAFVLAGVLRCCAGLG 140

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK---------- 142
           +   G+ +H  + RS + P+ V+ N+++ +Y+KCGD   A + F +M  K          
Sbjct: 141 DVESGRRIHGWILRSGVCPDVVLCNAVLDMYAKCGDHGRARRAFGAMAQKDATSWNIVIR 200

Query: 143 --------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
                               RD+ SW++++S  +  G   +A+    +M+  G   + Y 
Sbjct: 201 ACLQDGDLVGATQLFDESSLRDVSSWNTIVSGLMRHGHTTEALGRLQQMVRAGVTFSNYT 260

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           +S V        +  +G  ++G ++     + D  VGC+L+DM+ K   ++ESA  +FD+
Sbjct: 261 YSMVFALAGLLSSRDLGRQLHGRVV-VAVLEEDAFVGCSLMDMYCKCG-EMESALSIFDR 318

Query: 243 ---MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
               TE     W+ M+    Q G   +A+  F  M+  G    +F L+ V SAC+   + 
Sbjct: 319 WSDFTEDRQFAWSTMVAGYVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMV 378

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+Q+H +  + G   D  +  ++VDMY+K    GS++D+ ++F      NV  WT ++
Sbjct: 379 EQGRQVHGFVEKLGHRFDAPLASAIVDMYSK---SGSLEDACRIFRSAQTKNVALWTTML 435

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDS----NVAEQVYT 412
             Y  S G+ + A+++FS M   ++ PN  T  +VL AC   G + D     N+ ++ Y 
Sbjct: 436 CSYA-SHGQGRMALEIFSRMKAEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEY- 493

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
                G   +    N ++ +Y R+G ++ A+    +  E+N +S+  +V
Sbjct: 494 -----GIVPNTEHYNCMVDLYGRAGLLDKAK----NFIEENKISHEAVV 533



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 85/315 (26%), Positives = 152/315 (48%), Gaps = 15/315 (4%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           +  G   +A+  L  M + G      TYS++  L   + SR+  LG+ +H  +  + LE 
Sbjct: 234 MRHGHTTEALGRLQQMVRAGVTFSNYTYSMVFALAGLLSSRD--LGRQLHGRVVVAVLEE 291

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGN--KRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           ++ +  SL+ +Y KCG++  A  IF    +  +    +WS+M++ YV  G++ +A+  F 
Sbjct: 292 DAFVGCSLMDMYCKCGEMESALSIFDRWSDFTEDRQFAWSTMVAGYVQNGREEEALEFFR 351

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVK 228
            ML  G    ++  ++V  AC+N   V  G  ++GF+ K G+ FD+   +  A++DM+ K
Sbjct: 352 RMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFDAP--LASAIVDMYSK 409

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            S  LE A ++F     KN   WT M+      G  R A+ +F  M     +P+  TL  
Sbjct: 410 -SGSLEDACRIFRSAQTKNVALWTTMLCSYASHGQGRMALEIFSRMKAEKIMPNEITLVA 468

Query: 289 VVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR- 346
           V+SACS   L + G    +      G+  +      +VD+Y +    G +D ++   +  
Sbjct: 469 VLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNCMVDLYGRA---GLLDKAKNFIEEN 525

Query: 347 MLDHNVMSWTAIITG 361
            + H  + W  +++ 
Sbjct: 526 KISHEAVVWKTLLSA 540



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/208 (22%), Positives = 104/208 (50%), Gaps = 5/208 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR ++A+     M ++G        + +  +C  +     G+ VH  + +     +
Sbjct: 337 YVQNGREEEALEFFRRMLREGVPAGQFILTSVASACANAGMVEQGRQVHGFVEKLGHRFD 396

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + + ++++ +YSK G L +A +IF+S   K ++  W++M+ SY + G+   A+ +F  M 
Sbjct: 397 APLASAIVDMYSKSGSLEDACRIFRSAQTK-NVALWTTMLCSYASHGQGRMALEIFSRMK 455

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-KCGYFDSDVCVGCALIDMFVK-GS 230
                PNE    AV+ ACS++  V+ G+  +  +  + G   +     C ++D++ + G 
Sbjct: 456 AEKIMPNEITLVAVLSACSHSGLVSDGYHYFNLMQEEYGIVPNTEHYNC-MVDLYGRAGL 514

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRC 258
           +D    +   +K++ +  V W  +++ C
Sbjct: 515 LDKAKNFIEENKISHEAVV-WKTLLSAC 541


>gi|357481283|ref|XP_003610927.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512262|gb|AES93885.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 802

 Score =  473 bits (1217), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 242/630 (38%), Positives = 379/630 (60%), Gaps = 30/630 (4%)

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           +L C ++ ++  +D +     P     S +++AC        GK++H+    +     + 
Sbjct: 40  ELFCQQNRLKEAVDYLHRIPQPSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIV 99

Query: 320 VGCSLVDMYAKC--TVD--------------------------GSVDDSRKVFDRMLDHN 351
           +   L+ MYAKC   VD                          G ++ +RK+FD M   +
Sbjct: 100 ISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEMPHRD 159

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQV 410
             SW A+I+GYV S G   EA+ LF  M + + +  N FT +S L A   +      +++
Sbjct: 160 NFSWNAVISGYV-SQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEI 218

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + + ++ G  LD+ V  +L+ +Y + G + +AR  F+ + +K++VS+ TM+    ++   
Sbjct: 219 HGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADKDIVSWTTMIHRCFEDGRK 278

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           ++ F L  ++  +GV  + YTFA +L+  + + A   G+++H  + + G++      +AL
Sbjct: 279 KEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASAL 338

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + +YS+C N E A +VF +M   +++SWTS+I G+A++G    AL+ F  +L  G KP+ 
Sbjct: 339 VHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLRSGTKPDE 398

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           IT++ VLSAC+HAGL+  G ++F S+ ++HG+V   +HYAC++DLL RSG   EA   I 
Sbjct: 399 ITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFKEAENIID 458

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           +MP+  D  +W + LG CR+HG+ EL + AA+ + E +P++PA +I LSN+YA+AG W  
Sbjct: 459 NMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPENPATYITLSNIYANAGLWTE 518

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
              +R  M  R ++K+ G SWIE   +VH F VG+TSHPK  +I+  L +L+ K+KE GY
Sbjct: 519 ETKVRNDMDNRGIVKKPGKSWIEIKRQVHVFLVGDTSHPKISDIHEYLGELSKKMKEEGY 578

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           + DTNFVLH++EEEQK Q +F HSEK+AVAFG+ISTS   PI+VFKNLR C DCH A+KY
Sbjct: 579 VADTNFVLHDVEEEQKEQNIFYHSEKLAVAFGIISTSPGTPIKVFKNLRTCVDCHNAMKY 638

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           IS +  R+I++RDSNRFH   DG CSC DY
Sbjct: 639 ISKIVQRKIIVRDSNRFHCFVDGSCSCKDY 668



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 134/429 (31%), Positives = 216/429 (50%), Gaps = 52/429 (12%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R+++A+  L  + Q    P    YS L+ +C+R R   LGK VH+    S   P  VI N
Sbjct: 47  RLKEAVDYLHRIPQ----PSPRLYSTLIAACLRHRKLELGKRVHAHTKASNFIPGIVISN 102

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL--- 174
            LI +Y+KCG L +A  +F  +  K D+ SW++MIS Y N G+   A  +F EM      
Sbjct: 103 RLIHMYAKCGSLVDAQMLFDEIPQK-DLCSWNTMISGYANVGRIEQARKLFDEMPHRDNF 161

Query: 175 -------GFCPNEYCFSAV--IRACSNTENVAI--------------------GHIIYGF 205
                  G+    +   A+   R     E+                       G  I+G+
Sbjct: 162 SWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRGKEIHGY 221

Query: 206 LLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
           L++ G  + D  V  AL+D++ K GS  L  A  +FD+M +K+ V WT MI RC + G  
Sbjct: 222 LIRSG-LELDEVVWTALLDLYGKCGS--LNEARGIFDQMADKDIVSWTTMIHRCFEDGRK 278

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           ++   LF D++ SG  P+ +T +GV++AC++L     GK++H +  R G         +L
Sbjct: 279 KEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPFSFAASAL 338

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           V +Y+KC   G+ + +R+VF++M   +++SWT++I GY Q+G  D  A++ F  +++   
Sbjct: 339 VHVYSKC---GNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDM-ALQFFESLLRSGT 394

Query: 385 APNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRME 440
            P+  TF  VL AC    L+D  +    Y H+VK    L     +   +I + ARSGR +
Sbjct: 395 KPDEITFVGVLSACTHAGLVDIGLE---YFHSVKEKHGLVHTADHYACVIDLLARSGRFK 451

Query: 441 DARKAFESL 449
           +A    +++
Sbjct: 452 EAENIIDNM 460



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 136/508 (26%), Positives = 239/508 (47%), Gaps = 58/508 (11%)

Query: 157 NRGKQ-VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           NR K+ VD +H   +       P+   +S +I AC     + +G  ++    K   F   
Sbjct: 46  NRLKEAVDYLHRIPQ-------PSPRLYSTLIAACLRHRKLELGKRVHAHT-KASNFIPG 97

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           + +   LI M+ K GS  L  A  +FD++ +K+   W  MI+    +G    A +LF +M
Sbjct: 98  IVISNRLIHMYAKCGS--LVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARKLFDEM 155

Query: 275 ----------ILSGFLPDRFTLSGV-------VSACSELELFTS---------------G 302
                     ++SG++   + +  +        +  S   +FT                G
Sbjct: 156 PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAAAAISSLRRG 215

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K++H + IR+GL LD  V  +L+D+Y KC   GS++++R +FD+M D +++SWT +I   
Sbjct: 216 KEIHGYLIRSGLELDEVVWTALLDLYGKC---GSLNEARGIFDQMADKDIVSWTTMIHRC 272

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            +  GR KE   LF D++   V PN +TFA VL AC +L    + ++V+ +  + G    
Sbjct: 273 FED-GRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGYDPF 331

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
               ++L+ +Y++ G  E AR+ F  +   +LVS+ +++  YA+N   + A +    +  
Sbjct: 332 SFAASALVHVYSKCGNTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLR 391

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           +G      TF  +LS  +  G +  G E  H+   K G       Y  +I + +R    +
Sbjct: 392 SGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLARSGRFK 451

Query: 542 AAFQVFKEMEDR-NVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAVL 597
            A  +   M  + +   W S++ G   HG    A RA +  +++  +    N  TYI + 
Sbjct: 452 EAENIIDNMPMKPDKFLWASLLGGCRIHGNIELAERAAKALFELEPE----NPATYITLS 507

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQR 625
           +  ++AGL +E  K  R+  D  GIV++
Sbjct: 508 NIYANAGLWTEETK-VRNDMDNRGIVKK 534



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 86/267 (32%), Positives = 141/267 (52%), Gaps = 8/267 (2%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK +H  L RS LE + V+  +L+ LY KCG LNEA  IF  M +K DIVSW++MI    
Sbjct: 215 GKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMADK-DIVSWTTMIHRCF 273

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G++ +   +F +++  G  PNEY F+ V+ AC++     +G  ++G++ + GY D   
Sbjct: 274 EDGRKKEGFSLFRDLMGSGVRPNEYTFAGVLNACADLAAEQMGKEVHGYMTRVGY-DPFS 332

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
               AL+ ++ K   + E+A +VF++M   + V WT +I    Q G P  A++ F  ++ 
Sbjct: 333 FAASALVHVYSKCG-NTETARRVFNQMPRPDLVSWTSLIVGYAQNGQPDMALQFFESLLR 391

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
           SG  PD  T  GV+SAC+   L   G +  HS   + GL         ++D+ A+    G
Sbjct: 392 SGTKPDEITFVGVLSACTHAGLVDIGLEYFHSVKEKHGLVHTADHYACVIDLLAR---SG 448

Query: 336 SVDDSRKVFDRM-LDHNVMSWTAIITG 361
              ++  + D M +  +   W +++ G
Sbjct: 449 RFKEAENIIDNMPMKPDKFLWASLLGG 475



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 58/256 (22%), Positives = 107/256 (41%), Gaps = 44/256 (17%)

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +  +++ + +    ++A + LH I       S   +++L++       +  G+++HA   
Sbjct: 35  FEEIIELFCQQNRLKEAVDYLHRIPQP----SPRLYSTLIAACLRHRKLELGKRVHAHTK 90

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
            S F     I N LI MY++C ++  A  +F E+  +++ SW +MI+G+A  G   +A +
Sbjct: 91  ASNFIPGIVISNRLIHMYAKCGSLVDAQMLFDEIPQKDLCSWNTMISGYANVGRIEQARK 150

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE----------------- 619
           +F +M       +  ++ AV+S     G   E    FR M +                  
Sbjct: 151 LFDEM----PHRDNFSWNAVISGYVSQGWYMEALDLFRMMQENESSNCNMFTLSSALAAA 206

Query: 620 ------------HGIVQR--MEH----YACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
                       HG + R  +E     +  ++DL G+ GSL EA      M    D++ W
Sbjct: 207 AAISSLRRGKEIHGYLIRSGLELDEVVWTALLDLYGKCGSLNEARGIFDQMA-DKDIVSW 265

Query: 662 RTFLGACRVHGDTELG 677
            T +  C   G  + G
Sbjct: 266 TTMIHRCFEDGRKKEG 281


>gi|225458036|ref|XP_002280360.1| PREDICTED: pentatricopeptide repeat-containing protein At1g25360
           [Vitis vinifera]
          Length = 799

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/787 (34%), Positives = 420/787 (53%), Gaps = 111/787 (14%)

Query: 183 FSAVIRAC--SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           ++A ++ C   N  + +I   ++  ++  G+      +   LID++ K S DL SA+ +F
Sbjct: 16  YAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILN-RLIDVYCKSS-DLVSAHHLF 73

Query: 241 DKMTEKNTVGWTLMITR---------------CTQLGCPRD------------------- 266
           D++ + + V  T +I                  T LG  RD                   
Sbjct: 74  DEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGI-RDTVCYNAMITGYSHNNDGFG 132

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           AI LF D++ +GF PD FT + V+ A + + E     +Q+H   +++G      V  +L+
Sbjct: 133 AIELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVLNALL 192

Query: 326 DMYAKCTVDGS------VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK--------- 370
            ++ KC           +  +RK+FD M + + +SWT +I GYV++G  D          
Sbjct: 193 SVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGMT 252

Query: 371 ---------------------EAVKLFSDMIQGQVAPNHFTFASVLKACGN--------- 400
                                EA+++F  M    +  + FT+ SVL AC N         
Sbjct: 253 EKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQ 312

Query: 401 -----------------LLDSNVAEQVYTHAVKRGRA--------LDDCVG-NSLISMYA 434
                            L  +N    +Y    K   A        + D V  N+++S Y 
Sbjct: 313 VHAYILRTEPRPSLDFSLSVNNALATLYWKCGKVDEARQVFNQMPVKDLVSWNAILSGYV 372

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
            +GR+++A+  FE + E+NL+++  M+   A+N   E++ +L + ++  G     Y FA 
Sbjct: 373 NAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAG 432

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
            +   + + A+  G Q+HA++++ GF+S+    NALI+MY++C  VEAA  +F  M   +
Sbjct: 433 AIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTMPYLD 492

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
            +SW +MI    +HG  A+ALE+F  ML + I P+ IT++ VLS CSHAGL+ EG ++F+
Sbjct: 493 SVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGHRYFK 552

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM   +GI    +HYA M+DLL R+G  +EA + I +MP+     +W   L  CR+HG+ 
Sbjct: 553 SMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNM 612

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           +LG  AAE + E  PQ    ++LLSN+YA+ G W+ VA +RK M+++ + KE GCSWIE 
Sbjct: 613 DLGIQAAERLFELMPQHDGTYVLLSNMYATVGRWDDVAKVRKLMRDKGVKKEPGCSWIEV 672

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
           +NKVH F V +  HP+   +Y  L++L LK+++ GY+PDT FVLH++E EQK   L  HS
Sbjct: 673 ENKVHVFLVDDIVHPEVQAVYNYLEELGLKMRKLGYIPDTKFVLHDMESEQKEYVLSTHS 732

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           EK+AV FGL+       +RVFKNLR+CGDCH A K++S V  REIV+RD  RFHH K+G+
Sbjct: 733 EKLAVGFGLLKLPLGATVRVFKNLRICGDCHNAFKFMSKVVEREIVVRDGKRFHHFKNGE 792

Query: 855 CSCNDYW 861
           CSC +YW
Sbjct: 793 CSCGNYW 799



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 156/606 (25%), Positives = 259/606 (42%), Gaps = 124/606 (20%)

Query: 79  DTYSLLLKSCI--RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           + Y+  L+ C      ++ + + VH+ +  S  +P   ILN LI +Y K  DL  A+ +F
Sbjct: 14  NQYAAQLQQCCPHNPMSYSIARTVHAHMIASGFKPRGYILNRLIDVYCKSSDLVSAHHLF 73

Query: 137 ------------------KSMGNK--------------RDIVSWSSMISSYVNRGKQVDA 164
                              S GN               RD V +++MI+ Y +      A
Sbjct: 74  DEIRQPDIVARTTLIAAHSSAGNSNLAREIFFATPLGIRDTVCYNAMITGYSHNNDGFGA 133

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACS-NTENVAIGHIIYGFLLKCGY-FDSDVCVGCAL 222
           I +F ++L  GF P+ + F++V+ A +   E+      I+  ++K G  F + V    AL
Sbjct: 134 IELFRDLLRNGFRPDNFTFTSVLGALALIVEDEKQCQQIHCAVVKSGSGFVTSVL--NAL 191

Query: 223 IDMFVKGS--------VDLESAYKVFDKMTEKNTVGWTLMI---TRCTQLGCPR------ 265
           + +FVK +          + +A K+FD+MTE++ + WT MI    R  +L   R      
Sbjct: 192 LSVFVKCASSPLVSSSSLMAAARKLFDEMTERDELSWTTMIAGYVRNGELDAARQFLDGM 251

Query: 266 ----------------------DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
                                 +A+ +F  M L G   D FT + V+SAC+    F  GK
Sbjct: 252 TEKLVVAWNAMISGYVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGK 311

Query: 304 QLHSWAIRT----GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
           Q+H++ +RT     L   + V  +L  +Y KC   G VD++R+VF++M   +++SW AI+
Sbjct: 312 QVHAYILRTEPRPSLDFSLSVNNALATLYWKC---GKVDEARQVFNQMPVKDLVSWNAIL 368

Query: 360 TGYVQSG------------------------------GRDKEAVKLFSDMIQGQVAPNHF 389
           +GYV +G                              G  +E++KLF+ M      P  +
Sbjct: 369 SGYVNAGRIDEAKSFFEEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDY 428

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
            FA  + AC  L       Q++   V+ G       GN+LI+MYA+ G +E A   F ++
Sbjct: 429 AFAGAIIACAWLAALMHGRQLHAQLVRLGFDSSLSAGNALITMYAKCGVVEAAHCLFLTM 488

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
              + VS+N M+ A  ++ +  +A EL   +    +     TF ++LS  S  G + +G 
Sbjct: 489 PYLDSVSWNAMIAALGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEGH 548

Query: 510 QIHARIIKS-----GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
               R  KS     G       Y  +I +  R      A  + + M  +     W +++ 
Sbjct: 549 ----RYFKSMSGLYGICPGEDHYARMIDLLCRAGKFSEAKDMIETMPVEPGPPIWEALLA 604

Query: 564 GFAKHG 569
           G   HG
Sbjct: 605 GCRIHG 610



 Score =  119 bits (297), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 104/372 (27%), Positives = 168/372 (45%), Gaps = 52/372 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G   +A+     M   G   D  TY+ +L +C  +  F  GK VH+ + R++  P+
Sbjct: 266 YVHHGFFLEALEMFRKMYLLGIQWDEFTYTSVLSACANAGFFLHGKQVHAYILRTEPRPS 325

Query: 113 S----VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
                 + N+L +LY KCG ++EA ++F  M  K D+VSW++++S YVN G+  +A   F
Sbjct: 326 LDFSLSVNNALATLYWKCGKVDEARQVFNQMPVK-DLVSWNAILSGYVNAGRIDEAKSFF 384

Query: 169 VEMLEL-------------------------------GFCPNEYCFSAVIRACSNTENVA 197
            EM E                                GF P +Y F+  I AC+    + 
Sbjct: 385 EEMPERNLLTWTVMISGLAQNGFGEESLKLFNRMKSEGFEPCDYAFAGAIIACAWLAALM 444

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  ++  L++ G FDS +  G ALI M+ K  V +E+A+ +F  M   ++V W  MI  
Sbjct: 445 HGRQLHAQLVRLG-FDSSLSAGNALITMYAKCGV-VEAAHCLFLTMPYLDSVSWNAMIAA 502

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G    A+ LF  M+    LPDR T   V+S CS   L   G   H +         
Sbjct: 503 LGQHGHGAQALELFELMLKEDILPDRITFLTVLSTCSHAGLVEEG---HRYFKSMSGLYG 559

Query: 318 VCVG----CSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRD--- 369
           +C G      ++D+  +    G   +++ + + M ++     W A++ G    G  D   
Sbjct: 560 ICPGEDHYARMIDLLCRA---GKFSEAKDMIETMPVEPGPPIWEALLAGCRIHGNMDLGI 616

Query: 370 KEAVKLFSDMIQ 381
           + A +LF  M Q
Sbjct: 617 QAAERLFELMPQ 628


>gi|225447376|ref|XP_002274886.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Vitis vinifera]
          Length = 736

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 247/678 (36%), Positives = 397/678 (58%), Gaps = 6/678 (0%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           A++++ +NT++   G  ++  ++     +++  +   L   F  G   +  A  +FD + 
Sbjct: 64  ALLQSFTNTKSFKQGQQLHAHMISFSILENNTYLNTKLA-AFYAGCGLMSQAEVIFDGIV 122

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            KN+  W  MI      G P  ++ L+ +M+  G   D FT   V+ AC +L L   G++
Sbjct: 123 LKNSFLWNFMIRGYASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRR 182

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +HS  +  GL  D+ VG SL+ MYAK    G +  +R VFDRM + ++ SW  +I+GY +
Sbjct: 183 VHSEVVVCGLESDIYVGNSLLAMYAKF---GDMGTARMVFDRMAERDLTSWNTMISGYAK 239

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA-LDD 423
           +      A  +F  M +  +  +  T   +L AC +L      + ++ +AV+      + 
Sbjct: 240 NAD-SGTAFLVFDLMGKAGLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNK 298

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
              NSLI MY     M DAR+ FE +  K+ VS+N+M+  YA+N ++ ++  L   +   
Sbjct: 299 FFTNSLIEMYCNCNCMVDARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALD 358

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G G    TF ++L     I A+  G  IH+ ++K GF++N  +  AL+ MYS+C ++  +
Sbjct: 359 GSGPDQVTFIAVLGACDQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACS 418

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +VF EM D++++SW++M+ G+  HG    A+ I   M A+ + P+   + ++LSACSHA
Sbjct: 419 RRVFDEMPDKSLVSWSAMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHA 478

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL+ EG + F  M  E+ +   + HY+CMVDLLGR+G L EA   IR+M +     +W  
Sbjct: 479 GLVVEGKEIFYKMEKEYNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAA 538

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L A R+H + +L + +A+ + + +P+  +++I LSN+YA+   W+ V  +R  ++ + L
Sbjct: 539 LLTASRLHKNIKLAEISAQKVFDMNPKVVSSYICLSNIYAAEKRWDDVERVRAMVRRKGL 598

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K  GCS+IE DN VH+F VG+ SH +T +IYA+L++L  ++KE GY PDT+ V +++EE
Sbjct: 599 KKSPGCSFIELDNMVHRFLVGDKSHQQTEDIYAKLNELKQQLKEAGYKPDTSLVFYDVEE 658

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E K + L+ HSE++A+AF LI+T     IR+ KNLRVCGDCHT  K IS +TGREI++RD
Sbjct: 659 EVKEKMLWDHSERLAIAFALINTGPGTVIRITKNLRVCGDCHTVTKLISELTGREIIMRD 718

Query: 844 SNRFHHIKDGKCSCNDYW 861
            +RFHH   G CSC DYW
Sbjct: 719 IHRFHHFIKGFCSCGDYW 736



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 273/532 (51%), Gaps = 22/532 (4%)

Query: 48  NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSL-------LLKSCIRSRNFHLGKLV 100
           N    H + G V + +     M +   HP L  Y L       LL+S   +++F  G+ +
Sbjct: 26  NSFTSHFSQGDVAQMVERSLSMRE---HP-LQQYPLTSLQCGALLQSFTNTKSFKQGQQL 81

Query: 101 HS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           H+ +++ S LE N+ +   L + Y+ CG +++A  IF  +  K   + W+ MI  Y + G
Sbjct: 82  HAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFL-WNFMIRGYASNG 140

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
             + ++ ++ EML  G   + + +  V++AC +   V IG  ++  ++ CG  +SD+ VG
Sbjct: 141 LPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCG-LESDIYVG 199

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            +L+ M+ K   D+ +A  VFD+M E++   W  MI+   +      A  +F  M  +G 
Sbjct: 200 NSLLAMYAKFG-DMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKAGL 258

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDGSVD 338
             D  TL G++SAC++L+    GK +H +A+R  +   +     SL++MY  C     + 
Sbjct: 259 FADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNC---MV 315

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           D+R++F+R+   + +SW ++I GY ++G    E+++LF  M      P+  TF +VL AC
Sbjct: 316 DARRLFERVRWKDTVSWNSMILGYARNGDA-FESLRLFRRMALDGSGPDQVTFIAVLGAC 374

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
             +        ++++ VK+G   +  VG +L+ MY++ G +  +R+ F+ + +K+LVS++
Sbjct: 375 DQIAALRYGMSIHSYLVKKGFDANTIVGTALVDMYSKCGSLACSRRVFDEMPDKSLVSWS 434

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            MV  Y  +    +A  +L  ++   V      F S+LS  S  G + +G++I  ++ K 
Sbjct: 435 AMVAGYGLHGRGREAISILDGMKANSVIPDNGVFTSILSACSHAGLVVEGKEIFYKMEKE 494

Query: 519 -GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKH 568
              +     Y+ ++ +  R  +++ A+ + + ME +     W +++T    H
Sbjct: 495 YNVKPALSHYSCMVDLLGRAGHLDEAYVIIRTMEIKPTSDIWAALLTASRLH 546



 Score =  103 bits (256), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 92/358 (25%), Positives = 153/358 (42%), Gaps = 57/358 (15%)

Query: 366 GGRDKEAVKLFSDMIQGQVAP-------------NHFTFASVLKACGNLLDS-------N 405
           GGRD+E     S   QG VA                +   S+   CG LL S        
Sbjct: 19  GGRDREYNSFTSHFSQGDVAQMVERSLSMREHPLQQYPLTSL--QCGALLQSFTNTKSFK 76

Query: 406 VAEQVYTHAVKRGRALDDCVGNS-LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
             +Q++ H +      ++   N+ L + YA  G M  A   F+ +  KN   +N M+  Y
Sbjct: 77  QGQQLHAHMISFSILENNTYLNTKLAAFYAGCGLMSQAEVIFDGIVLKNSFLWNFMIRGY 136

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           A N    K+  L  E+   G     +T+  +L     +  +  G ++H+ ++  G ES+ 
Sbjct: 137 ASNGLPMKSLVLYREMLCFGQRADNFTYPFVLKACGDLLLVEIGRRVHSEVVVCGLESDI 196

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + N+L++MY++  ++  A  VF  M +R++ SW +MI+G+AK+  +  A  +F  M   
Sbjct: 197 YVGNSLLAMYAKFGDMGTARMVFDRMAERDLTSWNTMISGYAKNADSGTAFLVFDLMGKA 256

Query: 585 GIKPNGITYIAVLSACSHAGLISEG-------WKHFRSMYDEHGIVQRMEHYA---CMVD 634
           G+  +  T + +LSAC+    + EG        ++    Y++      +E Y    CMVD
Sbjct: 257 GLFADCTTLLGLLSACADLKAVKEGKVIHGYAVRNSIGNYNKFFTNSLIEMYCNCNCMVD 316

Query: 635 -------------------LLG--RSGSLTEALEFIRSMPLSA---DVLVWRTFLGAC 668
                              +LG  R+G   E+L   R M L     D + +   LGAC
Sbjct: 317 ARRLFERVRWKDTVSWNSMILGYARNGDAFESLRLFRRMALDGSGPDQVTFIAVLGAC 374


>gi|449440989|ref|XP_004138266.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449524140|ref|XP_004169081.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 695

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 239/629 (37%), Positives = 372/629 (59%), Gaps = 4/629 (0%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A  +F+ + +  +  + +MI        P +A+ LF  M       D+FT S V+ A
Sbjct: 71  IDYALSIFNHIDKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFTFSSVLKA 130

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS ++    G+Q+H+  +++G   +  V  +L+ MYA C   G +  +R VFD M + ++
Sbjct: 131 CSRMKALREGEQVHALILKSGFKSNEFVENTLIQMYANC---GQIGVARHVFDGMPERSI 187

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W ++++GY ++G  D E VKLF  +++ ++  +  T  SVL ACG L +  + E +  
Sbjct: 188 VAWNSMLSGYTKNGLWD-EVVKLFRKILELRIEFDDVTMISVLMACGRLANLEIGELIGE 246

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + V +G   ++ +  SLI MYA+ G+++ ARK F+ + ++++V+++ M+  YA+    ++
Sbjct: 247 YIVSKGLRRNNTLTTSLIDMYAKCGQVDTARKLFDEMDKRDVVAWSAMISGYAQADRCKE 306

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  L HE++   V  +  T  S+L   + +GA   G+ +H  I K   +    +   LI 
Sbjct: 307 ALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKLTVTLGTQLID 366

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
            Y++C  ++ + +VFKEM  +NV +WT++I G A +G    ALE F  ML + +KPN +T
Sbjct: 367 FYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSMLENDVKPNDVT 426

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +I VLSACSHA L+ +G   F SM  +  I  R+EHY CMVD+LGR+G L EA +FI +M
Sbjct: 427 FIGVLSACSHACLVDQGRHLFNSMRRDFDIEPRIEHYGCMVDILGRAGFLEEAYQFIDNM 486

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P   + +VWRT L +CR H + E+ + + E I   +P     +ILLSN YA  G  E   
Sbjct: 487 PFPPNAVVWRTLLASCRAHKNIEMAEKSLEHITRLEPAHSGDYILLSNTYALVGRVEDAI 546

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R  +KE+ + K  GCS IE D  VH+F   +  H  + EI+  LD++  +IK  GY+P
Sbjct: 547 RVRSLIKEKEIKKIPGCSLIELDGVVHEFFSEDGEHKHSKEIHDALDKMMKQIKRLGYVP 606

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           +T+    E EEE K   +  HSEK+A+A+GLI TS    IR+ KNLR+C DCH A K+IS
Sbjct: 607 NTDDARLEAEEESKETSVSHHSEKLAIAYGLIRTSPRTTIRISKNLRMCRDCHNATKFIS 666

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V  R I++RD NRFHH KDG CSCNDYW
Sbjct: 667 QVFERMIIVRDRNRFHHFKDGLCSCNDYW 695



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 246/462 (53%), Gaps = 21/462 (4%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+     M +K    D  T+S +LK+C R +    G+ VH+L+ +S  + N  + N+LI 
Sbjct: 105 ALLLFKKMHEKSVQHDKFTFSSVLKACSRMKALREGEQVHALILKSGFKSNEFVENTLIQ 164

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y+ CG +  A  +F  M  +R IV+W+SM+S Y   G   + + +F ++LEL    ++ 
Sbjct: 165 MYANCGQIGVARHVFDGMP-ERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDV 223

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
              +V+ AC    N+ IG +I  +++  G   ++  +  +LIDM+ K G VD  +A K+F
Sbjct: 224 TMISVLMACGRLANLEIGELIGEYIVSKGLRRNNT-LTTSLIDMYAKCGQVD--TARKLF 280

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+M +++ V W+ MI+   Q    ++A+ LF +M      P+  T+  V+ +C+ L  + 
Sbjct: 281 DEMDKRDVVAWSAMISGYAQADRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYE 340

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           +GK +H +  +  + L V +G  L+D YAKC   G +D S +VF  M   NV +WTA+I 
Sbjct: 341 TGKWVHFYIKKKKMKLTVTLGTQLIDFYAKC---GYIDRSVEVFKEMSFKNVFTWTALIQ 397

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G + + G  K A++ FS M++  V PN  TF  VL AC +    +    ++ ++++R   
Sbjct: 398 G-LANNGEGKMALEFFSSMLENDVKPNDVTFIGVLSACSHACLVDQGRHLF-NSMRRDFD 455

Query: 421 LDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAF 474
           ++  + +   ++ +  R+G +E+A +  +++ F  N V + T++ +   + N   +EK+ 
Sbjct: 456 IEPRIEHYGCMVDILGRAGFLEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSL 515

Query: 475 ELLHEIEDTGVG-----TSAYTFASLLSGASSIGAIGKGEQI 511
           E +  +E    G     ++ Y     +  A  + ++ K ++I
Sbjct: 516 EHITRLEPAHSGDYILLSNTYALVGRVEDAIRVRSLIKEKEI 557



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 144/521 (27%), Positives = 250/521 (47%), Gaps = 25/521 (4%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP--NSVILNSLISL 122
           +L  +TQ   +P     SL+L+ C   ++       H L TR  L+P     +L S   L
Sbjct: 12  SLTSITQFPENPK----SLILQQCKTPKDLQQVH-AHLLKTRRLLDPIITEAVLESAALL 66

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
                D   A  IF  + +K +  +++ MI     +    +A+ +F +M E     +++ 
Sbjct: 67  LPDTIDY--ALSIFNHI-DKPESSAYNVMIRGLAFKRSPDNALLLFKKMHEKSVQHDKFT 123

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
           FS+V++ACS  + +  G  ++  +LK G F S+  V   LI M+   G + +  A  VFD
Sbjct: 124 FSSVLKACSRMKALREGEQVHALILKSG-FKSNEFVENTLIQMYANCGQIGV--ARHVFD 180

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            M E++ V W  M++  T+ G   + ++LF  ++      D  T+  V+ AC  L     
Sbjct: 181 GMPERSIVAWNSMLSGYTKNGLWDEVVKLFRKILELRIEFDDVTMISVLMACGRLANLEI 240

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+ +  + +  GL  +  +  SL+DMYAKC   G VD +RK+FD M   +V++W+A+I+G
Sbjct: 241 GELIGEYIVSKGLRRNNTLTTSLIDMYAKC---GQVDTARKLFDEMDKRDVVAWSAMISG 297

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y Q+  R KEA+ LF +M +G V PN  T  SVL +C  L      + V+ +  K+   L
Sbjct: 298 YAQA-DRCKEALNLFHEMQKGNVYPNEVTMVSVLYSCAMLGAYETGKWVHFYIKKKKMKL 356

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              +G  LI  YA+ G ++ + + F+ +  KN+ ++  ++   A N   + A E    + 
Sbjct: 357 TVTLGTQLIDFYAKCGYIDRSVEVFKEMSFKNVFTWTALIQGLANNGEGKMALEFFSSML 416

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCAN 539
           +  V  +  TF  +LS  S    + +G  +    ++  F+    I  Y  ++ +  R   
Sbjct: 417 ENDVKPNDVTFIGVLSACSHACLVDQGRHLFNS-MRRDFDIEPRIEHYGCMVDILGRAGF 475

Query: 540 VEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALE 576
           +E A+Q    M    N + W +++     H     A ++LE
Sbjct: 476 LEEAYQFIDNMPFPPNAVVWRTLLASCRAHKNIEMAEKSLE 516


>gi|49333391|gb|AAT64030.1| putative pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 805

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 262/814 (32%), Positives = 438/814 (53%), Gaps = 81/814 (9%)

Query: 49  RLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           ++++    G ++ A+  L  M QK +  +  TY  +L+ C   ++   GK VHS++  + 
Sbjct: 72  KILHFCQLGDLENAM-ELVCMCQK-SELETKTYGSVLQLCAGLKSLTDGKKVHSIIKSNS 129

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           +  +  +   L+S Y+ CGDL E  ++F +M  K+++  W+ M+S Y             
Sbjct: 130 VGVDEALGLKLVSFYATCGDLKEGRRVFDTM-EKKNVYLWNFMVSEYA------------ 176

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
                                                  K G F   +C+   +++  ++
Sbjct: 177 ---------------------------------------KIGDFKESICLFKIMVEKGIE 197

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G    ESA ++FDK+ +++ + W  MI+     G     + ++  M+  G   D  T+  
Sbjct: 198 GKRP-ESASELFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIIS 256

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+  C+     + GK +HS AI++     +    +L+DMY+KC   G +D + +VF++M 
Sbjct: 257 VLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC---GDLDGALRVFEKMG 313

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV+SWT++I GY + G  D  A+ L   M +  V  +     S+L AC      +  +
Sbjct: 314 ERNVVSWTSMIAGYTRDGWSDG-AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGK 372

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+ +      A +  V N+L+ MYA+ G ME A   F ++  K+++S+NTMV     + 
Sbjct: 373 DVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPD- 431

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
                               + T A +L   +S+ A+ +G++IH  I+++G+ S+  + N
Sbjct: 432 --------------------SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVAN 471

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ +Y +C  +  A  +F  +  ++++SWT MI G+  HG+   A+  F +M   GI+P
Sbjct: 472 ALVDLYVKCGVLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEP 531

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + +++I++L ACSH+GL+ +GW+ F  M ++  I  ++EHYACMVDLL R+G+L++A +F
Sbjct: 532 DEVSFISILYACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKF 591

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I ++P++ D  +W   L  CR++ D EL +  AE + E +P++   ++LL+N+YA A   
Sbjct: 592 IETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKR 651

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG-ETSHPKTLEIYAELDQLALKIKE 767
           E V  +R+++ ++ L K  GCSWIE   +V+ F  G  +SHP + +I + L ++  K+KE
Sbjct: 652 EEVKRMREKIGKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKE 711

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY P T + L   +E QK   L  HSEK+A+AFGL++    K IRV KNLRVCGDCH  
Sbjct: 712 EGYFPKTKYALINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEM 771

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K++S  T REIVLRDSNRFHH KDG CSC  +W
Sbjct: 772 AKFMSKETRREIVLRDSNRFHHFKDGYCSCRGFW 805



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/372 (23%), Positives = 167/372 (44%), Gaps = 56/372 (15%)

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           R +DH V  + A I  + Q G  D E       M Q        T+ SVL+ C  L    
Sbjct: 60  RTIDHQVTDYNAKILHFCQLG--DLENAMELVCMCQKSELETK-TYGSVLQLCAGLKSLT 116

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN------------ 453
             ++V++        +D+ +G  L+S YA  G +++ R+ F+++ +KN            
Sbjct: 117 DGKKVHSIIKSNSVGVDEALGLKLVSFYATCGDLKEGRRVFDTMEKKNVYLWNFMVSEYA 176

Query: 454 ---------------------------------------LVSYNTMVDAYAKNLNSEKAF 474
                                                  ++S+N+M+  Y  N  +E+  
Sbjct: 177 KIGDFKESICLFKIMVEKGIEGKRPESASELFDKLCDRDVISWNSMISGYVSNGLTERGL 236

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            +  ++   G+     T  S+L G ++ G +  G+ +H+  IKS FE      N L+ MY
Sbjct: 237 GIYKQMMYLGIDVDLATIISVLVGCANSGTLSLGKAVHSLAIKSSFERRINFSNTLLDMY 296

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           S+C +++ A +VF++M +RNV+SWTSMI G+ + G++  A+ +  +M  +G+K + +   
Sbjct: 297 SKCGDLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIILLQQMEKEGVKLDVVAIT 356

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L AC+ +G +  G K        + +   +     ++D+  + GS+  A     +M +
Sbjct: 357 SILHACARSGSLDNG-KDVHDYIKANNMASNLFVCNALMDMYAKCGSMEGANSVFSTMVV 415

Query: 655 SADVLVWRTFLG 666
             D++ W T +G
Sbjct: 416 K-DIISWNTMVG 426


>gi|224119336|ref|XP_002331286.1| predicted protein [Populus trichocarpa]
 gi|222873711|gb|EEF10842.1| predicted protein [Populus trichocarpa]
          Length = 897

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/731 (33%), Positives = 419/731 (57%), Gaps = 7/731 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L +G  +K+I     M + G   D  + +++LK+C       +G  VH L+ +   + + 
Sbjct: 157 LQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDCDV 216

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           V  ++L+ +Y+KC  L+++  +F  +  K + VSWS+MI+  V   + V+ + +F EM  
Sbjct: 217 VTGSALLGMYAKCKRLDDSLSVFSELPEK-NWVSWSAMIAGCVQNDRNVEGLELFKEMQG 275

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           +G   ++  ++++ R+C+    + +G  ++   LK   F SD+ VG A +DM+ K    +
Sbjct: 276 VGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSA-FGSDIIVGTATLDMYAKCG-RM 333

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A KV   M + +   +  +I    +      A++ F  ++ +G   D  TLSG ++AC
Sbjct: 334 ADAQKVLSSMPKCSLQSYNAIIVGYARSDRGFQALKSFQLLLKTGLGFDEITLSGALNAC 393

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + +     G+Q+H  A+++    ++CV  +++DMY KC       D   +FD M   + +
Sbjct: 394 ASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASD---LFDMMERRDAV 450

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW AII    Q+G  ++E +  F+ MI  ++ P+ FT+ SVLKAC      N   +++T 
Sbjct: 451 SWNAIIAACEQNG-NEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTR 509

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K G   D  VG +L+ MY + G +E A K  +   +K +VS+N ++  ++    SE A
Sbjct: 510 IIKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDA 569

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +    + + GV    +T+A++L   +++  +G G+QIHA+IIK   +S+  I + L+ M
Sbjct: 570 HKFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLGKQIHAQIIKQELQSDVYICSTLVDM 629

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           YS+C N++ +  +F++  +R+ ++W +M+ G+A HG    AL++F  M    +KPN  T+
Sbjct: 630 YSKCGNMQDSQLMFEKAPNRDFVTWNAMLCGYAHHGLGEEALKLFESMQLVNVKPNHATF 689

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           ++VL AC+H GL+ +G  +F  M  E+G+  + EHY+CMVD+LGRSG + EAL  ++ MP
Sbjct: 690 VSVLRACAHMGLVDKGLHYFDVMLSEYGLDPQSEHYSCMVDILGRSGRIDEALNLVQKMP 749

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
             AD ++WR  L  C++HG+ E+ + A   +L+ DPQD +A +LLSN+YA AG W  V+ 
Sbjct: 750 FEADAVIWRNLLSVCKIHGNVEVAEKATRALLQLDPQDSSACVLLSNIYADAGMWGNVSE 809

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +RK M+   L KE GCSWIE  ++VH F VG+  HP+  EIY +L  L  +++  GY+PD
Sbjct: 810 MRKMMRHNKLKKEPGCSWIELKDEVHAFLVGDKGHPRDEEIYEKLGVLIGEMQSVGYIPD 869

Query: 774 TNFVLHELEEE 784
            + +L E  EE
Sbjct: 870 CDVLLDEEVEE 880



 Score =  270 bits (691), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 176/648 (27%), Positives = 316/648 (48%), Gaps = 45/648 (6%)

Query: 69  MTQKGNHP--DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI----------- 115
           + Q    P   + T+S + + C +  + + GK  H+ +     EP + +           
Sbjct: 38  LAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMYIKC 97

Query: 116 --------------------LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
                                NS+IS Y+ CG+++ A K F  M  +RD+VSW+S+IS +
Sbjct: 98  LYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEM-PERDVVSWNSVISGF 156

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           +  G+   +I +F+EM   G   +    + V++AC   E   +G  ++G ++K G FD D
Sbjct: 157 LQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFG-FDCD 215

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           V  G AL+ M+ K    L+ +  VF ++ EKN V W+ MI  C Q     + + LF +M 
Sbjct: 216 VVTGSALLGMYAKCK-RLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQ 274

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
             G    +   + +  +C+ L     GK+LHS A+++    D+ VG + +DMYAKC   G
Sbjct: 275 GVGVGVSQSIYASLFRSCAALSALRLGKELHSHALKSAFGSDIIVGTATLDMYAKC---G 331

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            + D++KV   M   ++ S+ AII GY +S  R  +A+K F  +++  +  +  T +  L
Sbjct: 332 RMADAQKVLSSMPKCSLQSYNAIIVGYARS-DRGFQALKSFQLLLKTGLGFDEITLSGAL 390

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
            AC ++       QV+  AVK     + CV N+++ MY +   + +A   F+ +  ++ V
Sbjct: 391 NACASIRGDLEGRQVHGLAVKSISMSNICVANAILDMYGKCKALAEASDLFDMMERRDAV 450

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           S+N ++ A  +N N E+       +  + +    +T+ S+L   +   A+  G +IH RI
Sbjct: 451 SWNAIIAACEQNGNEEETLAHFASMIHSRMEPDDFTYGSVLKACAGRQALNTGMEIHTRI 510

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           IKSG   +  +  AL+ MY +C  +E A ++    E + ++SW ++I+GF+    +  A 
Sbjct: 511 IKSGMGFDSFVGAALVDMYCKCGMIEKADKIHDRTEQKTMVSWNAIISGFSLLQQSEDAH 570

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           + F +ML  G+ P+  TY AVL  C++   +  G K   +   +  +   +   + +VD+
Sbjct: 571 KFFSRMLEMGVNPDNFTYAAVLDTCANLATVGLG-KQIHAQIIKQELQSDVYICSTLVDM 629

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             + G++ ++       P + D + W   L     HG   LG+ A ++
Sbjct: 630 YSKCGNMQDSQLMFEKAP-NRDFVTWNAMLCGYAHHG---LGEEALKL 673



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/311 (22%), Positives = 136/311 (43%), Gaps = 34/311 (10%)

Query: 376 FSDMIQGQVAP--NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
           FS + Q Q  P     TF+ + + C      N  +Q +   +  G      V N L+ MY
Sbjct: 35  FSTLAQNQTQPPAKIRTFSHIYQECSKQNSLNPGKQAHARMIFCGFEPTTFVSNCLMQMY 94

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYA---------------------------- 465
            +   ++ A K F+ ++ +++VSYN+++  YA                            
Sbjct: 95  IKCLYLDYACKVFDKMYLRDVVSYNSIISGYASCGEMDIARKFFYEMPERDVVSWNSVIS 154

Query: 466 ---KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
              +N    K+ ++  E+   GVG    + A +L    ++     G Q+H  ++K GF+ 
Sbjct: 155 GFLQNGECRKSIDVFLEMGRCGVGFDRASLAVVLKACGALEECDMGVQVHGLVVKFGFDC 214

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           +    +AL+ MY++C  ++ +  VF E+ ++N +SW++MI G  ++      LE+F +M 
Sbjct: 215 DVVTGSALLGMYAKCKRLDDSLSVFSELPEKNWVSWSAMIAGCVQNDRNVEGLELFKEMQ 274

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
             G+  +   Y ++  +C+    +  G K   S   +      +      +D+  + G +
Sbjct: 275 GVGVGVSQSIYASLFRSCAALSALRLG-KELHSHALKSAFGSDIIVGTATLDMYAKCGRM 333

Query: 643 TEALEFIRSMP 653
            +A + + SMP
Sbjct: 334 ADAQKVLSSMP 344


>gi|222612904|gb|EEE51036.1| hypothetical protein OsJ_31684 [Oryza sativa Japonica Group]
          Length = 637

 Score =  473 bits (1216), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 226/573 (39%), Positives = 361/573 (63%), Gaps = 5/573 (0%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           +++AC+        + +H+    +  A  V +  SL+ +Y KC   G+V D+R+VFD M 
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKC---GAVADARRVFDGMP 126

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             ++ SWT++I GY Q+   D EA+ L   M++G+  PN FTFAS+LKA G    S + E
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPD-EALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGE 185

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++   VK     D  VG++L+ MYAR GRM+ A   F+ L  KN VS+N ++  +A+  
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           + E    +  E++  G   + +T++S+ S  + IGA+ +G+ +HA +IKSG   +  + N
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            ++ MY++  ++  A +VF  ++ ++V++W SM+T FA++G    A+  F +M   G+  
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N IT++++L+ACSH GL+ EG ++F  M  E+ +   ++HY  +VDLLGR+G L +AL F
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I  MP+     VW   LG+CR+H + ++G+ AA+ + E DP D    +LL N+YAS G W
Sbjct: 425 IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQW 484

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           +  A +RK MK   + KE  CSW+E +N VH F   + +HP++ EIY + ++++++I++ 
Sbjct: 485 DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA 544

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+P+T++VL  ++E+++   L  HSEKIA+AF LI+      IR+ KN+R+CGDCH+A 
Sbjct: 545 GYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAF 604

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +YIS V  REIV+RD+NRFHH   G CSC DYW
Sbjct: 605 RYISKVFKREIVVRDTNRFHHFSSGSCSCGDYW 637



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/320 (35%), Positives = 178/320 (55%), Gaps = 11/320 (3%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y  L+ +C R R+    + +H+ L  S+   +  + NSLI LY KCG + +A ++F  M 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGM- 125

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
             RD+ SW+S+I+ Y       +A+ +   ML   F PN + F+++++A   + +  IG 
Sbjct: 126 PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGE 185

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            I+   +K  + D DV VG AL+DM+ + G +D+  A  VFD++  KN V W  +I    
Sbjct: 186 QIHALTVKYDWHD-DVYVGSALLDMYARCGRMDM--AIAVFDQLESKNGVSWNALIAGFA 242

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           + G     + +F +M  +GF    FT S V SA + +     GK +H+  I++G  L   
Sbjct: 243 RKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAF 302

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-GRDKEAVKLFSD 378
           VG +++DMYAK    GS+ D+RKVFDR+   +V++W +++T + Q G GR  EAV  F +
Sbjct: 303 VGNTILDMYAK---SGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR--EAVTHFEE 357

Query: 379 MIQGQVAPNHFTFASVLKAC 398
           M +  V  N  TF S+L AC
Sbjct: 358 MRKCGVHLNQITFLSILTAC 377



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 155/301 (51%), Gaps = 11/301 (3%)

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           ++A     + S++ AC      + A  ++ H      A    + NSLI +Y + G + DA
Sbjct: 59  ELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADA 118

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R+ F+ +  +++ S+ +++  YA+N   ++A  LL  +       + +TFASLL  A + 
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            + G GEQIHA  +K  +  +  + +AL+ MY+RC  ++ A  VF ++E +N +SW ++I
Sbjct: 179 ASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALI 238

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHG 621
            GFA+ G     L +F +M  +G +    TY +V SA +  G + +G W H   +     
Sbjct: 239 AGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG-- 296

Query: 622 IVQRMEHYA--CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
             +R+  +    ++D+  +SGS+ +A +    +    DV+ W + L A   +G   LG+ 
Sbjct: 297 --ERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYG---LGRE 350

Query: 680 A 680
           A
Sbjct: 351 A 351



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 152/313 (48%), Gaps = 16/313 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T++ LLK+   S +  +G+ +H+L  +     +  + ++L+ +Y++CG ++ A  +
Sbjct: 163 PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  + +K   VSW+++I+ +  +G     + MF EM   GF    + +S+V  A +    
Sbjct: 223 FDQLESKNG-VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 281

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++  ++K G   S   VG  ++DM+ K S  +  A KVFD++ +K+ V W  M+
Sbjct: 282 LEQGKWVHAHMIKSGERLS-AFVGNTILDMYAK-SGSMIDARKVFDRVDKKDVVTWNSML 339

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           T   Q G  R+A+  F +M   G   ++ T   +++ACS   L   GKQ         L 
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE 399

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            ++    ++VD+  +    G ++D+     +M     M  TA + G +    R  +  K+
Sbjct: 400 PEIDHYVTVVDLLGRA---GLLNDALVFIFKM----PMKPTAAVWGALLGSCRMHKNAKI 452

Query: 376 FSDMIQGQVAPNH 388
                 GQ A +H
Sbjct: 453 ------GQFAADH 459



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 6/203 (2%)

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           + L  ++   +  +   + SL++  +   ++     IHA +  S F  +  + N+LI +Y
Sbjct: 50  DTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLY 109

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C  V  A +VF  M  R++ SWTS+I G+A++     AL +   ML    KPNG T+ 
Sbjct: 110 CKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFA 169

Query: 595 AVLSA--CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++L A   S +  I E        YD H  V      + ++D+  R G +  A+     +
Sbjct: 170 SLLKAAGASASSGIGEQIHALTVKYDWHDDVYVG---SALLDMYARCGRMDMAIAVFDQL 226

Query: 653 PLSADVLVWRTFLGACRVHGDTE 675
             S + + W   +      GD E
Sbjct: 227 E-SKNGVSWNALIAGFARKGDGE 248


>gi|145332693|ref|NP_001078212.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274431|sp|Q9LW32.1|PP258_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g26782, mitochondrial; Flags: Precursor
 gi|9279668|dbj|BAB01225.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332643694|gb|AEE77215.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 246/633 (38%), Positives = 375/633 (59%), Gaps = 14/633 (2%)

Query: 239 VFDKMTEKNTV-GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F++  +K  V  W  +I    + G   +A+  F  M      P R +    + ACS L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SGKQ H  A   G   D+ V  +L+ MY+ C   G ++D+RKVFD +   N++SWT+
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC---GKLEDARKVFDEIPKRNIVSWTS 147

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF------ASVLKACGNLLDSNVAEQVY 411
           +I GY    G   +AV LF D++  +   +   F       SV+ AC  +    + E ++
Sbjct: 148 MIRGY-DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206

Query: 412 THAVKRGRALDDCVGNSLISMYARSGR--MEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +  +KRG      VGN+L+  YA+ G   +  ARK F+ + +K+ VSYN+++  YA++  
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 470 SEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           S +AFE+   +    V T +A T +++L   S  GA+  G+ IH ++I+ G E +  +  
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ++I MY +C  VE A + F  M+++NV SWT+MI G+  HG AA+ALE+F  M+  G++P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N IT+++VL+ACSHAGL  EGW+ F +M    G+   +EHY CMVDLLGR+G L +A + 
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ M +  D ++W + L ACR+H + EL + +   + E D  +   ++LLS++YA AG W
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           + V  +R  MK R L+K  G S +E + +VH F +G+  HP+  +IY  L +L  K+ E 
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+ +T+ V H+++EE+K   L  HSEK+A+AFG+++T     + V KNLRVC DCH  I
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IS +  RE V+RD+ RFHH KDG CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 134/443 (30%), Positives = 227/443 (51%), Gaps = 13/443 (2%)

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F    +K D+ SW+S+I+     G   +A+  F  M +L   P    F   I+ACS+  
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G   +      GY  SD+ V  ALI M+      LE A KVFD++ ++N V WT M
Sbjct: 91  DIFSGKQTHQQAFVFGY-QSDIFVSSALIVMYSTCG-KLEDARKVFDEIPKRNIVSWTSM 148

Query: 255 ITRCTQLGCPRDAIRLFLDMIL------SGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           I      G   DA+ LF D+++           D   L  V+SACS +      + +HS+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I+ G    V VG +L+D YAK   +G V  +RK+FD+++D + +S+ +I++ Y QS G 
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGG-EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GM 266

Query: 369 DKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             EA ++F  +++ +V   N  T ++VL A  +     + + ++   ++ G   D  VG 
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           S+I MY + GR+E ARKAF+ +  KN+ S+  M+  Y  + ++ KA EL   + D+GV  
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 488 SAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           +  TF S+L+  S  G   +G +  +A   + G E     Y  ++ +  R   ++ A+ +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 547 FKEMEDR-NVISWTSMITGFAKH 568
            + M+ + + I W+S++     H
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIH 469



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 242/509 (47%), Gaps = 50/509 (9%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M +   +P   ++   +K+C    +   GK  H        + +  + 
Sbjct: 55  GDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVS 114

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML---- 172
           ++LI +YS CG L +A K+F  +  KR+IVSW+SMI  Y   G  +DA+ +F ++L    
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEI-PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173

Query: 173 --ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
             +     +     +VI ACS      +   I+ F++K G FD  V VG  L+D + KG 
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNTLLDAYAKGG 232

Query: 231 V-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSG 288
              +  A K+FD++ +K+ V +  +++   Q G   +A  +F  ++ +  +  +  TLS 
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+ A S       GK +H   IR GL  DV VG S++DMY KC   G V+ +RK FDRM 
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC---GRVETARKAFDRMK 349

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV SWTA+I GY   G   K A++LF  MI   V PN+ TF SVL AC          
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAK-ALELFPAMIDSGVRPNYITFVSVLAAC---------- 398

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
              +HA                 ++    R  +A K    + E  L  Y  MVD   +  
Sbjct: 399 ---SHA----------------GLHVEGWRWFNAMKGRFGV-EPGLEHYGCMVDLLGRAG 438

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             +KA++L+  ++   +   +  ++SLL+       +   E   AR+ +   +S++C Y 
Sbjct: 439 FLQKAYDLIQRMK---MKPDSIIWSSLLAACRIHKNVELAEISVARLFE--LDSSNCGYY 493

Query: 529 ALIS-MYSRCANVEAAFQVFKEMEDRNVI 556
            L+S +Y+     +   +V   M++R ++
Sbjct: 494 MLLSHIYADAGRWKDVERVRMIMKNRGLV 522



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPD---LDTYSLL--LKSCIRSRNFHLGKLVHSLLTR 106
           Y LN   +       DL+  + +  D   LD+  L+  + +C R     L + +HS + +
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211

Query: 107 SKLEPNSVILNSLISLYSKCGD--LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
              +    + N+L+  Y+K G+  +  A KIF  + +K D VS++S++S Y   G   +A
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEA 270

Query: 165 IHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
             +F  +++      N    S V+ A S++  + IG  I+  +++ G  D DV VG ++I
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED-DVIVGTSII 329

Query: 224 DMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           DM+ K G V  E+A K FD+M  KN   WT MI      G    A+ LF  MI SG  P+
Sbjct: 330 DMYCKCGRV--ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387

Query: 283 RFTLSGVVSACSELELFTSG 302
             T   V++ACS   L   G
Sbjct: 388 YITFVSVLAACSHAGLHVEG 407


>gi|297849104|ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338275|gb|EFH68692.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 741

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 249/695 (35%), Positives = 400/695 (57%), Gaps = 38/695 (5%)

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCT 259
           +I+  ++K G  +++  +   L    +    D L  A  VF+ + E N + W  M     
Sbjct: 51  LIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETIQEPNLLIWNTMFRGHA 110

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
               P  A++L++ MI  G LP+ +T   ++ +C++ + F  G+Q+H   ++ G  LD+ 
Sbjct: 111 LSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHVLKLGYDLDLF 170

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG------------- 366
           V  SL+ +Y +   +G ++D+RKVFDR    +V+S+TA+I GY   G             
Sbjct: 171 VHTSLISVYVQ---NGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESAQKLFDEIP 227

Query: 367 -----------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
                            G  KEA++LF +M++  + P+  T  +V+ AC       +  Q
Sbjct: 228 VKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQSGSIELGRQ 287

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V++     G   +  + NSL+ +Y++ G +E A   FE L  K+++S+NT++  Y     
Sbjct: 288 VHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKDVISWNTLIGGYTHMNL 347

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI---IKSGFESNHCI 526
            ++A  L  E+  +G   +  T  S+L   + +GAI  G  IH  I   +KS   ++  +
Sbjct: 348 YKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDKRLKSATNAS-SL 406

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             +LI MY++C ++EAA QVF  +  +++ SW +MI GFA HG A  A +IF +M   GI
Sbjct: 407 RTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAFDIFSRMRKIGI 466

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ IT++ +LSACS +G++  G   FR+M  ++ I  ++EHY CM+DLLG SG   EA 
Sbjct: 467 EPDDITFVGLLSACSRSGMLDLGRHIFRTMTQDYKITPKLEHYGCMIDLLGHSGLFKEAE 526

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           E I +M +  D ++W + L AC++ G+ ELG+  A+ +++ +P++P  ++LLSN+YA+AG
Sbjct: 527 EMINNMEMEPDGVIWCSLLKACKIRGNVELGESFAQNLIKIEPENPGCYVLLSNIYATAG 586

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W  VA IR  + ++ + K  GCS IE D+ VH+F +G+  HP+  EIY  L+++ + ++
Sbjct: 587 RWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLE 646

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           + G++PDT+ VL E+EEE K   L  HSEK+A+AFGLIST     + + KNLRVC +CH 
Sbjct: 647 KAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 706

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A K IS +  REI+ RD  RFHH +DG CSCNDYW
Sbjct: 707 ATKLISKIYKREIIARDRTRFHHFRDGVCSCNDYW 741



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 157/615 (25%), Positives = 284/615 (46%), Gaps = 103/615 (16%)

Query: 30  PSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           PSSS PF   P++S+P  + L                       NHP L     LL +C 
Sbjct: 11  PSSSYPFHFLPSSSDPPYDSL----------------------RNHPSLS----LLHNC- 43

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL---YSKCGDLNEANKIFKSMGNKRDIV 146
             +     +L+H+ + ++ L   +  L+ L+ L         L  A  +F+++  + +++
Sbjct: 44  --KTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFETI-QEPNLL 100

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
            W++M   +      V A+ ++V M+ LG  PN Y F  ++++C+ ++    G  I+G +
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFLLKSCAKSKAFKEGQQIHGHV 160

Query: 207 LKCGYFDSDVCVGCALIDMFVK-GSVD-----------------------------LESA 236
           LK GY D D+ V  +LI ++V+ G ++                             +ESA
Sbjct: 161 LKLGY-DLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRDVVSYTALIKGYASRGYIESA 219

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+FD++  K+ V W  MI+   + G  ++A+ LF +M+ +   PD  T+  VVSAC++ 
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRPDESTMVTVVSACAQS 279

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+Q+HSW    G   ++ +  SL+D+Y+KC   G ++ +  +F+ +L  +V+SW 
Sbjct: 280 GSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKC---GELETACGLFEGLLYKDVISWN 336

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I GY       KEA+ LF +M++    PN  T  S+L AC +L   ++   ++ +  K
Sbjct: 337 TLIGGYTHM-NLYKEALLLFQEMLRSGERPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 417 RGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           R ++  +   +  SLI MYA+ G +E A + F S+  K+L S+N M+  +A +  ++ AF
Sbjct: 396 RLKSATNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAAF 455

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           ++   +   G+     TF  LLS  S  G +  G  I   + +                 
Sbjct: 456 DIFSRMRKIGIEPDDITFVGLLSACSRSGMLDLGRHIFRTMTQD---------------- 499

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
                    +++  ++E      +  MI      G    A E+   M    ++P+G+ + 
Sbjct: 500 ---------YKITPKLE-----HYGCMIDLLGHSGLFKEAEEMINNM---EMEPDGVIWC 542

Query: 595 AVLSACSHAGLISEG 609
           ++L AC   G +  G
Sbjct: 543 SLLKACKIRGNVELG 557


>gi|347954546|gb|AEP33773.1| organelle transcript processing 82, partial [Lobularia maritima]
          Length = 695

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 251/661 (37%), Positives = 388/661 (58%), Gaps = 35/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF+ + E N + W  M         P  A+ L++ MI  G LP+ +T   ++ +
Sbjct: 38  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 97

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ + F  G+Q+H   ++ G  LD+ V  SL+ MY +   +G ++D+RKVFD+    +V
Sbjct: 98  CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQ---NGRLEDARKVFDQSSHRDV 154

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
           +S+TA+ITGY   G                              G +KEA++LF +M++ 
Sbjct: 155 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 214

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V P+  T  SV+ AC       +  QV++     G   +  + N+LI +Y + G +E A
Sbjct: 215 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 274

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              FE L  K+++S+NT++  Y      ++A  L  E+  +G   +  T  S+L   + +
Sbjct: 275 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 334

Query: 503 GAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           GAI  G  IH  I K   G  +      +LI MY++C ++EAA QVF  + +R++ SW +
Sbjct: 335 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA 394

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI GFA HG A  A +IF +M  + I+P+ IT++ +LSACSH+G++  G   FRSM +++
Sbjct: 395 MIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDY 454

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I  ++EHY CM+DLLG SG   EA E I +M +  D ++W + L AC++HG+ ELG+  
Sbjct: 455 KITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELGESY 514

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +++ +P++P +++LLSN+YA+AG W  VA IR  + ++ + K  GCS IE D+ VH+
Sbjct: 515 AQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHE 574

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F +G+  HP+  EIY  L+++ + ++E G++PDT+ VL E+EEE K   L  HSEK+A+A
Sbjct: 575 FIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 634

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLIST     + + KNLRVC +CH A K IS +  REI+ RD  RFHH +DG CSCNDY
Sbjct: 635 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 694

Query: 861 W 861
           W
Sbjct: 695 W 695



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 253/511 (49%), Gaps = 47/511 (9%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLIS---LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           +++H+ + ++ L   +  L+ LI    L      L  A  +F+++  + +++ W++M   
Sbjct: 4   RMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFETI-QEPNLLIWNTMFRG 62

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           +      V A++++V M+ LG  PN Y F  ++++C+ ++    G  I+G +LK GY D 
Sbjct: 63  HALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGY-DL 121

Query: 215 DVCVGCALIDMFVK-GSVD-----------------------------LESAYKVFDKMT 244
           D+ V  +LI M+V+ G ++                             + SA K+FD++ 
Sbjct: 122 DLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIP 181

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            K+ V W  MI+   + G  ++A+ LF +M+ +   PD  T+  VVSAC++      G+Q
Sbjct: 182 IKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQ 241

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +HSW    G   ++ +  +L+D+Y KC   G V+ +  +F+ +   +V+SW  +I GY  
Sbjct: 242 VHSWIDDHGFGSNLKIVNALIDLYIKC---GEVETACGLFEGLSYKDVISWNTLIGGYTH 298

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
                KEA+ LF +M++   +PN  T  S+L AC +L    +   ++ +  KR + + + 
Sbjct: 299 M-NLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANA 357

Query: 425 VGN--SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             +  SLI MYA+ G +E A++ F+S+  ++L S+N M+  +A +  +  AF++   +  
Sbjct: 358 SSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRK 417

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANV 540
             +     TF  LLS  S  G +  G  I  R +K  ++    +  Y  +I +       
Sbjct: 418 NEIEPDDITFVGLLSACSHSGMLDLGRHIF-RSMKEDYKITPKLEHYGCMIDLLGHSGLF 476

Query: 541 EAAFQVFK--EMEDRNVISWTSMITGFAKHG 569
           + A ++    EME   VI W S++     HG
Sbjct: 477 KEAEEMINTMEMEPDGVI-WCSLLKACKMHG 506



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 195/408 (47%), Gaps = 40/408 (9%)

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD---SRKVFDRMLDHNVMSWT 356
           +S + +H+  I+TGL        +L  +   C +    D    +  VF+ + + N++ W 
Sbjct: 1   SSLRMIHAQMIKTGLH---NTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIWN 57

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +  G+  S      A+ L+  MI   + PN +TF  +LK+C         +Q++ H +K
Sbjct: 58  TMFRGHALSSD-PVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLK 116

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAF---------------------------ESL 449
            G  LD  V  SLISMY ++GR+EDARK F                           + +
Sbjct: 117 LGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKM 176

Query: 450 FE----KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F+    K++VS+N M+  YA+  N+++A EL  E+  T V     T  S++S  +   +I
Sbjct: 177 FDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASI 236

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             G Q+H+ I   GF SN  I NALI +Y +C  VE A  +F+ +  ++VISW ++I G+
Sbjct: 237 ELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGGY 296

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIVQ 624
                   AL +F +ML  G  PN +T +++L AC+H G I  G W H        G+  
Sbjct: 297 THMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVAN 356

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
              H   ++D+  + G +  A +   S+ L+  +  W   +    +HG
Sbjct: 357 ASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHG 403



 Score =  172 bits (437), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 127/495 (25%), Positives = 232/495 (46%), Gaps = 85/495 (17%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A++    M   G  P+  T+  LLKSC +S+ F  G+ +H  + +   + +  +  SLIS
Sbjct: 72  ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLIS 131

Query: 122 LYSKCGDLNEANKIFKSMGNK------------------------------RDIVSWSSM 151
           +Y + G L +A K+F    ++                              +D+VSW++M
Sbjct: 132 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 191

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           IS Y   G   +A+ +F EM++    P+E    +V+ AC+ + ++ +G  ++ ++   G 
Sbjct: 192 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG- 250

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F S++ +  ALID+++K   ++E+A  +F+ ++ K+ + W  +I   T +   ++A+ LF
Sbjct: 251 FGSNLKIVNALIDLYIKCG-EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 309

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYA 329
            +M+ SG  P+  T+  ++ AC+ L     G+ +H +  +   G+A       SL+DMYA
Sbjct: 310 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 369

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           KC   G ++ +++VFD +L+ ++ SW A+I G+    GR   A  +FS M + ++ P+  
Sbjct: 370 KC---GDIEAAQQVFDSILNRSLSSWNAMIFGFAMH-GRANAAFDIFSRMRKNEIEPDDI 425

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           TF  +L AC                                   + SG ++  R  F S+
Sbjct: 426 TFVGLLSAC-----------------------------------SHSGMLDLGRHIFRSM 450

Query: 450 FEK-----NLVSYNTMVDAYAKNLNSEKAFELLH--EIEDTGVGTSAYTFASLLSGASSI 502
            E       L  Y  M+D    +   ++A E+++  E+E  GV      + SLL      
Sbjct: 451 KEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGV-----IWCSLLKACKMH 505

Query: 503 GAIGKGEQIHARIIK 517
           G +  GE     +IK
Sbjct: 506 GNVELGESYAQNLIK 520



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 3/250 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M +    PD  T   ++ +C +S +  LG+ VHS +       N  I+
Sbjct: 199 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 258

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LY KCG++  A  +F+ +  K D++SW+++I  Y +     +A+ +F EML  G 
Sbjct: 259 NALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 317

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG-CALIDMFVKGSVDLES 235
            PN+    +++ AC++   + IG  I+ ++ K     ++      +LIDM+ K   D+E+
Sbjct: 318 SPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCG-DIEA 376

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD +  ++   W  MI      G    A  +F  M  +   PD  T  G++SACS 
Sbjct: 377 AQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSH 436

Query: 296 LELFTSGKQL 305
             +   G+ +
Sbjct: 437 SGMLDLGRHI 446


>gi|359476777|ref|XP_002278837.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
            repeat-containing protein At3g23330 [Vitis vinifera]
          Length = 1008

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 270/764 (35%), Positives = 422/764 (55%), Gaps = 66/764 (8%)

Query: 150  SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI---RACSNTENVAIGHIIYGFL 206
            SM++S +++G     +     +L LGF  + Y +  +       S++ N     +++  L
Sbjct: 259  SMLASKISQG----TVATVGGLLFLGFSLSSYFYPPLXYFSSTFSDSMNYPNSEVLHAKL 314

Query: 207  LKCGYFDSDVCVGCA---LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
            +K G      CVG     L++++ K S +LE A+K+F+++ + +   WT++I+   ++G 
Sbjct: 315  IKNG------CVGIRGNHLLNLYAK-SQNLEQAHKMFEEIPQTDVFSWTVLISGFARIGL 367

Query: 264  PRDAIRLFLDMILSGFLPDRFTLSGVVSACS-ELELFTSGKQLHSWAIRTGLALDVCVGC 322
              D + LF  M   G  P++FTLS V+ +CS  +     GK +H W +R GL LD  +  
Sbjct: 368  SADVLGLFTKMQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNN 427

Query: 323  SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---------------- 366
            S++D Y KC   G  +   K+F  M + + +SW  +++ Y+Q G                
Sbjct: 428  SILDYYVKCRCFGYAE---KLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKD 484

Query: 367  --------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
                          G ++ A++L   M+    A N  TF+  L    +L    + +Q++T
Sbjct: 485  AASWNTMIDGLMRNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHT 544

Query: 413  HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL---------------VSY 457
              +K G   D  V NSLI MY + G ME A   F+ L +++                VS+
Sbjct: 545  QVLKVGVLDDGFVRNSLIDMYCKCGEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSW 604

Query: 458  NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
            ++MV  Y +N   E A +    +  + V    +T  S++S  +S G +  G Q+H  I K
Sbjct: 605  SSMVSGYVQNGRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQK 664

Query: 518  SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
             G   +  + +++I MY +C ++  A+ +F + +DRNV+ WTSMI+G A HG    A+ +
Sbjct: 665  IGHGLDVFLGSSIIDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRL 724

Query: 578  FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
            F  M+ +GI PN ++++ VL+ACSHAGL+ EG K+FR M + +GI    EH+ CMVDL G
Sbjct: 725  FELMINEGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVYGIRPGAEHFTCMVDLYG 784

Query: 638  RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
            R+G L E  EFI +  +S    VWR+FL +CRVH + E+G    + +LE +P D   +IL
Sbjct: 785  RAGRLNEIKEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLELEPFDAGPYIL 844

Query: 698  LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
             S++ A+   WE  A IR  M++R + K    SWI+  N+VH F +G+ SHP+  +IY+ 
Sbjct: 845  FSSICATEHRWEEAAKIRSLMQQRGVKKNPSQSWIQLKNQVHSFVMGDRSHPQDTKIYSY 904

Query: 758  LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            LD+L  ++KE GY  D   V+ ++E+EQ+   L  HSEK+A+A+G+IST+   PIRV KN
Sbjct: 905  LDELIGRLKEIGYSTDVTPVMQDVEQEQRQVLLGYHSEKLAIAYGIISTAPGTPIRVMKN 964

Query: 818  LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            LRVC DCH  IKY S + GREI++RD +RFHH K G CSC DYW
Sbjct: 965  LRVCIDCHNFIKYASELLGREIIIRDIHRFHHFKHGHCSCADYW 1008



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/561 (26%), Positives = 267/561 (47%), Gaps = 70/561 (12%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N L++LY+K  +L +A+K+F+ +  + D+ SW+ +IS +   G   D + +F +M + G 
Sbjct: 325 NHLLNLYAKSQNLEQAHKMFEEI-PQTDVFSWTVLISGFARIGLSADVLGLFTKMQDQGV 383

Query: 177 CPNEYCFSAVIRAC-SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           CPN++  S V+++C SN  +  IG  I+G++L+ G  D D  +  +++D +VK       
Sbjct: 384 CPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNG-LDLDAVLNNSILDYYVKCRC-FGY 441

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQL-------------------------------GCP 264
           A K+F  M EK+TV W +M++   Q+                               GC 
Sbjct: 442 AEKLFGLMAEKDTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLMRNGCE 501

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           R A+ L   M+ +G   ++ T S  +   S L +   GKQ+H+  ++ G+  D  V  SL
Sbjct: 502 RVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLDDGFVRNSL 561

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVM---------------SWTAIITGYVQSGGRD 369
           +DMY KC   G ++ +  +F  +   + M               SW+++++GYVQ+ GR 
Sbjct: 562 IDMYCKC---GEMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQN-GRF 617

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           ++A+K FS MI  QV  + FT  SV+ AC +     +  QV+ +  K G  LD  +G+S+
Sbjct: 618 EDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSI 677

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MY + G + DA   F    ++N+V + +M+   A +    +A  L   + + G+  + 
Sbjct: 678 IDMYVKCGSLNDAWLIFNQAKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNE 737

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKS--GFESNHCIYNALISMYSRCANVEAAFQVF 547
            +F  +L+  S  G + +G + + R+++   G       +  ++ +Y R   +       
Sbjct: 738 VSFVGVLTACSHAGLLEEGCK-YFRLMREVYGIRPGAEHFTCMVDLYGRAGRLNE----I 792

Query: 548 KEMEDRNVIS-----WTSMITGFAKHGFAARALEIFYKMLADGIKP-NGITYIAVLSACS 601
           KE    N IS     W S ++    H      + +  K+L   ++P +   YI   S C+
Sbjct: 793 KEFIHNNAISKLSSVWRSFLSSCRVHKNIEMGIWVCKKLLE--LEPFDAGPYILFSSICA 850

Query: 602 HAGLISEGWKHFRSMYDEHGI 622
                 E  K  RS+  + G+
Sbjct: 851 TEHRWEEAAK-IRSLMQQRGV 870



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 215/430 (50%), Gaps = 67/430 (15%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRN-FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M  +G  P+  T S++LKSC  + N   +GK +H  + R+ L+ ++V+ NS++  Y KC 
Sbjct: 378 MQDQGVCPNQFTLSIVLKSCSSNVNDSRIGKGIHGWILRNGLDLDAVLNNSILDYYVKCR 437

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRG---KQVD--------------------- 163
               A K+F  M  K D VSW+ M+SSY+  G   K VD                     
Sbjct: 438 CFGYAEKLFGLMAEK-DTVSWNIMMSSYLQIGDMQKSVDLFRQLPGKDAASWNTMIDGLM 496

Query: 164 -------AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
                  A+ +  +M+  G   N+  FS  +   S+   + +G  I+  +LK G  D D 
Sbjct: 497 RNGCERVALELLYKMVAAGPAFNKLTFSIALVLASSLSVLGLGKQIHTQVLKVGVLD-DG 555

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKN---------------TVGWTLMITRCTQL 261
            V  +LIDM+ K   ++E A  +F  + +++               +V W+ M++   Q 
Sbjct: 556 FVRNSLIDMYCKCG-EMEKASVIFKHLPQESSMMNSEESCDDAVVESVSWSSMVSGYVQN 614

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   DA++ F  MI S    D+FTL+ VVSAC+   +   G+Q+H +  + G  LDV +G
Sbjct: 615 GRFEDALKTFSFMICSQVEVDKFTLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLG 674

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            S++DMY KC   GS++D+  +F++  D NV+ WT++I+G     G+ +EAV+LF  MI 
Sbjct: 675 SSIIDMYVKC---GSLNDAWLIFNQAKDRNVVLWTSMISGCALH-GQGREAVRLFELMIN 730

Query: 382 GQVAPNHFTFASVLKAC--GNLLDSN-----VAEQVYTHAVKRGRALDDCVGNSLISMYA 434
             + PN  +F  VL AC    LL+       +  +VY   ++ G     C    ++ +Y 
Sbjct: 731 EGITPNEVSFVGVLTACSHAGLLEEGCKYFRLMREVY--GIRPGAEHFTC----MVDLYG 784

Query: 435 RSGRMEDARK 444
           R+GR+ + ++
Sbjct: 785 RAGRLNEIKE 794



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/173 (28%), Positives = 82/173 (47%), Gaps = 5/173 (2%)

Query: 20  PSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLD 79
           P   S  N   S     +   + S  +S     ++ +GR + A+ T   M       D  
Sbjct: 582 PQESSMMNSEESCDDAVVESVSWSSMVSG----YVQNGRFEDALKTFSFMICSQVEVDKF 637

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T + ++ +C  +    LG+ VH  + +     +  + +S+I +Y KCG LN+A  IF + 
Sbjct: 638 TLTSVVSACASAGVLELGRQVHGYIQKIGHGLDVFLGSSIIDMYVKCGSLNDAWLIF-NQ 696

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
              R++V W+SMIS     G+  +A+ +F  M+  G  PNE  F  V+ ACS+
Sbjct: 697 AKDRNVVLWTSMISGCALHGQGREAVRLFELMINEGITPNEVSFVGVLTACSH 749


>gi|224068783|ref|XP_002302824.1| predicted protein [Populus trichocarpa]
 gi|222844550|gb|EEE82097.1| predicted protein [Populus trichocarpa]
          Length = 581

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 243/590 (41%), Positives = 358/590 (60%), Gaps = 11/590 (1%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M+  G  PD FT   ++ ACS L  F  G ++H   ++ G    V +  SL+ MY KC  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCD- 59

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
               + SR+VFD M D N +SW+AII   +Q   R KE   LF  M+     P+     +
Sbjct: 60  --KYELSRQVFDEMPDKNAVSWSAIIGACLQDD-RCKEGFSLFRQMLSEGSRPSR---GA 113

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           +L A   +     A+ VY   V+ G   D  V ++   M+AR GR+E ARK F+ +  K+
Sbjct: 114 ILNAMACVRSHEEADDVYRVVVENGLDFDQSVQSAAAGMFARCGRVEVARKLFDGIMSKD 173

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           LV++ T ++AY K     +A  LL ++   G+   A T   ++   S++ +      +H 
Sbjct: 174 LVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG 233

Query: 514 RIIKSGFESNH--CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
            II +GF  N    +  ALI +Y +C ++  A +VF  M++RN+I+W++MI+G+  HG+ 
Sbjct: 234 -IITTGFFYNQLLAVETALIDLYVKCGSLTYARKVFDGMQERNIITWSAMISGYGMHGWG 292

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             AL +F +M A  +KP+ IT++++LSACSH+GL++EGW+ F SM  + G+  R EHYAC
Sbjct: 293 REALNLFDQMKA-SVKPDHITFVSILSACSHSGLVAEGWECFNSMARDFGVTPRPEHYAC 351

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           MVD+LGR+G L EA +FI  MP+  +  VW   LGACR+H + +L +  A  + + DP +
Sbjct: 352 MVDILGRAGKLDEACDFIERMPVRPNAAVWGALLGACRIHLNVDLAEMVARALFDLDPHN 411

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              +++L N+Y   G  +   +IR  MK R + K AG S IE  NK++ F  G+ SHP+T
Sbjct: 412 AGRYVILYNIYTLTGKRKEADSIRTLMKNRGVKKIAGYSVIEIKNKLYAFVAGDRSHPQT 471

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
             IY+EL++L  +I++ GY PD NFVLH+++EE K   L+ HSEK+A+ FGL++      
Sbjct: 472 DLIYSELERLMDRIRQEGYTPDINFVLHDVDEETKESMLYLHSEKLAIVFGLLNLGPGSV 531

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IR+ KNLRVCGDCHTA K+IS VTGREIV+RD++RFHH K+G CSC DYW
Sbjct: 532 IRIRKNLRVCGDCHTATKFISKVTGREIVVRDAHRFHHFKNGACSCRDYW 581



 Score =  162 bits (411), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 174/335 (51%), Gaps = 16/335 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  PD  T+  ++K+C   R+F  G  +H  + +   +    I NSLI++Y KC  
Sbjct: 1   MLRLGIQPDNFTFPFIIKACSCLRHFEFGIRIHQDVVKFGYQSQVFISNSLITMYGKCDK 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
              + ++F  M +K + VSWS++I + +   +  +   +F +ML  G  P+     A++ 
Sbjct: 61  YELSRQVFDEMPDK-NAVSWSAIIGACLQDDRCKEGFSLFRQMLSEGSRPSR---GAILN 116

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A +   +      +Y  +++ G  D D  V  A   MF + G V  E A K+FD +  K+
Sbjct: 117 AMACVRSHEEADDVYRVVVENG-LDFDQSVQSAAAGMFARCGRV--EVARKLFDGIMSKD 173

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W   I    +   P +A+ L   M+L G  PD  TL GV+ ACS L  F     +H 
Sbjct: 174 LVTWATTIEAYVKADMPLEALGLLKQMMLQGIFPDAITLLGVIRACSTLASFQLAHIVHG 233

Query: 308 WAIRTGLALD--VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
             I TG   +  + V  +L+D+Y KC   GS+  +RKVFD M + N+++W+A+I+GY   
Sbjct: 234 -IITTGFFYNQLLAVETALIDLYVKC---GSLTYARKVFDGMQERNIITWSAMISGYGMH 289

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           G   +EA+ LF D ++  V P+H TF S+L AC +
Sbjct: 290 GW-GREALNLF-DQMKASVKPDHITFVSILSACSH 322



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 87/313 (27%), Positives = 153/313 (48%), Gaps = 21/313 (6%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L D R ++       M  +G+ P      L   +C+RS        V+ ++  + L+ + 
Sbjct: 87  LQDDRCKEGFSLFRQMLSEGSRPSRGAI-LNAMACVRSHE--EADDVYRVVVENGLDFDQ 143

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++   ++++CG +  A K+F  + +K D+V+W++ I +YV     ++A+ +  +M+ 
Sbjct: 144 SVQSAAAGMFARCGRVEVARKLFDGIMSK-DLVTWATTIEAYVKADMPLEALGLLKQMML 202

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G  P+      VIRACS   +  + HI++G +    +++  + V  ALID++VK GS  
Sbjct: 203 QGIFPDAITLLGVIRACSTLASFQLAHIVHGIITTGFFYNQLLAVETALIDLYVKCGS-- 260

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A KVFD M E+N + W+ MI+     G  R+A+ LF D + +   PD  T   ++SA
Sbjct: 261 LTYARKVFDGMQERNIITWSAMISGYGMHGWGREALNLF-DQMKASVKPDHITFVSILSA 319

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM 347
           CS   L   G     W     +A D   G +    +  C VD     G +D++    +RM
Sbjct: 320 CSHSGLVAEG-----WECFNSMARD--FGVTPRPEHYACMVDILGRAGKLDEACDFIERM 372

Query: 348 -LDHNVMSWTAII 359
            +  N   W A++
Sbjct: 373 PVRPNAAVWGALL 385


>gi|347954540|gb|AEP33770.1| organelle transcript processing 82, partial [Raphanus sativus]
          Length = 675

 Score =  472 bits (1215), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/663 (37%), Positives = 388/663 (58%), Gaps = 35/663 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF+ + E N + W  M+        P  A+ +++ M+  G LP+ ++   ++ +
Sbjct: 14  LPYAISVFETIQEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLKS 73

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK---------------------C 331
           C++ + F  G+Q+H+  ++ G  LD  V  SL+ MYA+                     C
Sbjct: 74  CAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVSC 133

Query: 332 TV-------DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           T         G    +RKVFD + + +V+SW A+ITGYV++G R +EA++LF +M++  V
Sbjct: 134 TALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVENG-RYEEALELFKEMMRTNV 192

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYT----HAVKRGRALDDCVGNSLISMYARSGRME 440
            P+  T  SV+ AC       +  QV++         G +    + N+LI +Y++ G +E
Sbjct: 193 RPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKCGDVE 252

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A   FE L  K++VS+NT++  Y      ++A  L  E+  +G   +  T  S+L   +
Sbjct: 253 TAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEMLRSGECPNDVTLLSVLPACA 312

Query: 501 SIGAIGKGEQIHARIIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            +GAI  G  IH  I K   G  +   +  +LI MY++C ++EAA QVF  M  R++ SW
Sbjct: 313 HLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYRSLSSW 372

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
            +MI GFA HG A  A ++F +M  + ++P+ IT++ +LSACSH+GL+  G + F+SM  
Sbjct: 373 NAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIFKSMTQ 432

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           ++ +  ++EHY CM+DLLG SG   EA E I +MP+  D ++W + L AC+ HG+ EL +
Sbjct: 433 DYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVIWCSLLKACKKHGNLELAE 492

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
             A+ +++ +P++  +++LLSN+YA+AG WE VA +R  +  + + K  GCS IE D+ V
Sbjct: 493 SFAQKLIKIEPENSGSYVLLSNIYATAGRWEDVARVRGVLNGKGMKKVPGCSSIEVDSVV 552

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           H+F +G+  HP+  EIY  L+++ ++++E G+ PDT+ VL E+EEE K   L  HSEK+A
Sbjct: 553 HEFIIGDKLHPRRREIYHMLEEMDVQLEEAGFAPDTSEVLQEMEEEWKEGALRHHSEKLA 612

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           +AFGLIST     + + KNLRVC +CH A K IS +  REIV RD  RFHH +DG CSC 
Sbjct: 613 IAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCC 672

Query: 859 DYW 861
           DYW
Sbjct: 673 DYW 675



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 144/516 (27%), Positives = 245/516 (47%), Gaps = 49/516 (9%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A  +F+++  + +++ W++M+  + +    V A+ M+V M+ LG  PN Y F  +++
Sbjct: 14  LPYAISVFETI-QEPNLLIWNTMLRGHASSSDPVSALEMYVRMVSLGHLPNSYSFPFLLK 72

Query: 189 ACSNTENVAIGHIIYGFLLKCG--------------------------YFDS----DVCV 218
           +C+ ++    G  I+  +LK G                           FD+    DV  
Sbjct: 73  SCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGGLEDARKVFDASSHRDVVS 132

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             ALI  +     D  SA KVFD++TE++ V W  MIT   + G   +A+ LF +M+ + 
Sbjct: 133 CTALITGYASRG-DFRSARKVFDEITERDVVSWNAMITGYVENGRYEEALELFKEMMRTN 191

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT----GLALDVCVGCSLVDMYAKCTVD 334
             PD  TL  VVSAC++      G+Q+HSW        G +  + +  +L+D+Y+KC   
Sbjct: 192 VRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSSLKIVNALIDLYSKC--- 248

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G V+ +  +F+ +   +V+SW  +I GY  +    KEA+ LF +M++    PN  T  SV
Sbjct: 249 GDVETAFGLFEGLSCKDVVSWNTLIGGYTHT-NLYKEALLLFQEMLRSGECPNDVTLLSV 307

Query: 395 LKACGNLLDSNVAEQVYTHAVK--RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           L AC +L   ++   ++ +  K  +G   +  +  SLI MYA+ G +E A + F S+  +
Sbjct: 308 LPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKCGDIEAAHQVFNSMLYR 367

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           +L S+N M+  +A +  +  AF+L   +    V     TF  LLS  S  G +  G QI 
Sbjct: 368 SLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFVGLLSACSHSGLLDLGRQIF 427

Query: 513 ARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKE--MEDRNVISWTSMITGFAKHG 569
             + +          Y  +I +       + A ++     ME   VI W S++    KHG
Sbjct: 428 KSMTQDYNLTPKLEHYGCMIDLLGHSGLFKEAEEMIHTMPMEPDGVI-WCSLLKACKKHG 486

Query: 570 FAARALEIFYKMLADGIKP-NGITYIAVLSACSHAG 604
               A     K++   I+P N  +Y+ + +  + AG
Sbjct: 487 NLELAESFAQKLIK--IEPENSGSYVLLSNIYATAG 520



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 222/444 (50%), Gaps = 46/444 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G+ P+  ++  LLKSC +S+ F  G+ +H+ + +     +  +  SLIS+Y++ G 
Sbjct: 55  MVSLGHLPNSYSFPFLLKSCAKSKAFEEGRQIHAQVLKLGCGLDRYVHTSLISMYARNGG 114

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
           L +A K+F +  ++                              RD+VSW++MI+ YV  
Sbjct: 115 LEDARKVFDASSHRDVVSCTALITGYASRGDFRSARKVFDEITERDVVSWNAMITGYVEN 174

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY---FDSD 215
           G+  +A+ +F EM+     P+E    +V+ AC+ + ++ +G  ++ ++        F S 
Sbjct: 175 GRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHGFSSS 234

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           + +  ALID++ K   D+E+A+ +F+ ++ K+ V W  +I   T     ++A+ LF +M+
Sbjct: 235 LKIVNALIDLYSKCG-DVETAFGLFEGLSCKDVVSWNTLIGGYTHTNLYKEALLLFQEML 293

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTV 333
            SG  P+  TL  V+ AC+ L     G+ +H +  +   G+  +  +  SL+DMYAKC  
Sbjct: 294 RSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYAKC-- 351

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G ++ + +VF+ ML  ++ SW A+I G+    GR   A  LFS M   +V P+  TF  
Sbjct: 352 -GDIEAAHQVFNSMLYRSLSSWNAMIFGFAMH-GRANAAFDLFSRMRGNRVEPDDITFVG 409

Query: 394 VLKACGNLLDSNVAEQVY---THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL- 449
           +L AC +    ++  Q++   T        L+      +I +   SG  ++A +   ++ 
Sbjct: 410 LLSACSHSGLLDLGRQIFKSMTQDYNLTPKLEHY--GCMIDLLGHSGLFKEAEEMIHTMP 467

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKA 473
            E + V + +++ A  K+ N E A
Sbjct: 468 MEPDGVIWCSLLKACKKHGNLELA 491



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/258 (31%), Positives = 135/258 (52%), Gaps = 7/258 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK---- 108
           ++ +GR ++A+     M +    PD  T   ++ +C +S +  LG+ VHS +        
Sbjct: 171 YVENGRYEEALELFKEMMRTNVRPDEGTLVSVVSACAQSGSIELGRQVHSWVDDDDDDHG 230

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
              +  I+N+LI LYSKCGD+  A  +F+ +  K D+VSW+++I  Y +     +A+ +F
Sbjct: 231 FSSSLKIVNALIDLYSKCGDVETAFGLFEGLSCK-DVVSWNTLIGGYTHTNLYKEALLLF 289

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL-LKCGYFDSDVCVGCALIDMFV 227
            EML  G CPN+    +V+ AC++   + IG  I+ ++  K     ++  +  +LIDM+ 
Sbjct: 290 QEMLRSGECPNDVTLLSVLPACAHLGAIDIGRWIHVYIDKKLKGVTNETSLRTSLIDMYA 349

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K   D+E+A++VF+ M  ++   W  MI      G    A  LF  M  +   PD  T  
Sbjct: 350 KCG-DIEAAHQVFNSMLYRSLSSWNAMIFGFAMHGRANAAFDLFSRMRGNRVEPDDITFV 408

Query: 288 GVVSACSELELFTSGKQL 305
           G++SACS   L   G+Q+
Sbjct: 409 GLLSACSHSGLLDLGRQI 426


>gi|16905194|gb|AAL31064.1|AC090120_10 hypothetical protein [Oryza sativa Japonica Group]
 gi|31432781|gb|AAP54374.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 698

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 256/681 (37%), Positives = 406/681 (59%), Gaps = 7/681 (1%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            ++++++C    ++  G +++  L+  G   +   +   LI M+     DL SA ++F  
Sbjct: 23  LASLLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSH-CADLASALRLFAA 81

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M  +N V WT +++  +Q     DA+  F  M  +G  P RF LS    A + L     G
Sbjct: 82  MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 141

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
            QLH   +R G   ++ V  +L DMY+KC   G + ++ +VFD+M   + ++WTA+I GY
Sbjct: 142 AQLHCVGVRLGFDTELFVASNLADMYSKC---GLLSEACRVFDQMPQKDAVAWTAMIDGY 198

Query: 363 VQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            ++G  +  AV  F DM  +G V  +   F SVL A G L D  +++ ++    K G  L
Sbjct: 199 AKNGSLEA-AVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 257

Query: 422 DDCVGNSLISMYARSGRMEDARKAFE-SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           +  V N+LI MYA+S  +E A +  +      N+VS  +M+D Y +    E+A  +  E+
Sbjct: 258 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 317

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              GV  + +TF+S++ G +    + +G Q+HA++IK+    +  + + L+ MY +C  +
Sbjct: 318 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLI 377

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             + Q+F E+E R  I+W ++I  FA+HG    A++ F +M+  GI+PN I ++++L+AC
Sbjct: 378 SLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 437

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SHAGL+ EG K+F SM + HGI  + EHY+C++D  GR+G L EA +FI  MP+  +   
Sbjct: 438 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 497

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W + LGACR+ G  ELG+ AA+ +++ +P +   H+ LS +YAS G WE V  +RK M++
Sbjct: 498 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 557

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             + K  G SW++++ K H F   + SHP+  +IY +L++L  +IKE GY+PDT+F+   
Sbjct: 558 SRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCN 617

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           LE+  K + L  HSE+IAVAF LIS   +KPI V KNLR+C DCHTA K+I  V  R+I+
Sbjct: 618 LEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDII 677

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD++RFHH  +G+CSC DYW
Sbjct: 678 VRDNSRFHHFVNGRCSCGDYW 698



 Score =  176 bits (445), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 135/486 (27%), Positives = 244/486 (50%), Gaps = 16/486 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNK 142
           LL+SC R+ +   G+L+H+ L  S     S  L N LI++YS C DL  A ++F +M  +
Sbjct: 26  LLQSCGRAGDLRRGRLLHARLVLSGAAAASTFLANHLITMYSHCADLASALRLFAAM-PR 84

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R+ VSW++++S         DA+  F  M   G  P  +  S+  RA +       G  +
Sbjct: 85  RNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQL 144

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +   ++ G FD+++ V   L DM+ K  + L  A +VFD+M +K+ V WT MI    + G
Sbjct: 145 HCVGVRLG-FDTELFVASNLADMYSKCGL-LSEACRVFDQMPQKDAVAWTAMIDGYAKNG 202

Query: 263 CPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
               A+  F DM   G +  D+     V+SA   L+     K +H    + G  L+V V 
Sbjct: 203 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAVR 262

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +L+DMYAK      V+ + +V    +D    NV+S T++I GY+++   + EA+ ++ +
Sbjct: 263 NALIDMYAKSM---DVESASRVLK--IDPGGWNVVSGTSMIDGYIETDCVE-EALVIYVE 316

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           + +  V PN FTF+S++K C          Q++   +K     D  VG++L+ MY + G 
Sbjct: 317 LRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGL 376

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +  + + F  +  +  +++N +++ +A++ +  +A +    +  +G+  +   F SLL+ 
Sbjct: 377 ISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTA 436

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVI 556
            S  G + +G +    + ++ G E     Y+ +I  Y R   ++ A++   EM  + N  
Sbjct: 437 CSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAY 496

Query: 557 SWTSMI 562
            W S++
Sbjct: 497 GWCSLL 502



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 179/398 (44%), Gaps = 53/398 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKG-NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           +  +G ++ A+ +   M ++G    D   +  +L +    ++  L K +H  +T++  E 
Sbjct: 198 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 257

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              + N+LI +Y+K  D+  A+++ K      ++VS +SMI  Y+      +A+ ++VE+
Sbjct: 258 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 317

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G  PNE+ FS++I+ C+    +  G  ++  ++K      D  VG  L+DM+ K G 
Sbjct: 318 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLI-RDSFVGSTLVDMYGKCGL 376

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           + L  + ++F+++  +  + W  +I    Q G  R+AI+ F  MI SG  P+      ++
Sbjct: 377 ISL--SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLL 434

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +ACS                                        G VD+  K F  M + 
Sbjct: 435 TACSHA--------------------------------------GLVDEGLKYFYSMKEA 456

Query: 351 NVMS-----WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           + +      ++ II  Y ++G  D EA K  S+M    + PN + + S+L AC  +  S 
Sbjct: 457 HGIEPKEEHYSCIIDTYGRAGRLD-EAYKFISEM---PIKPNAYGWCSLLGAC-RMRGSK 511

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
              +V    + +    +  +  SL  +YA  G+ ED +
Sbjct: 512 ELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVK 549


>gi|334185563|ref|NP_188975.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274454|sp|Q9LW63.1|PP251_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g23330
 gi|11994318|dbj|BAB02277.1| unnamed protein product [Arabidopsis thaliana]
 gi|332643232|gb|AEE76753.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 715

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 235/655 (35%), Positives = 376/655 (57%), Gaps = 34/655 (5%)

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F  +     + W  +I   T       A+  F++M  SG  PD      V+ +C+ +   
Sbjct: 62  FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAK----------------------------- 330
             G+ +H + +R G+  D+  G +L++MYAK                             
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181

Query: 331 ----CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
               C +   +D  R+VF+ M   +V+S+  II GY QSG  + +A+++  +M    + P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE-DALRMVREMGTTDLKP 240

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           + FT +SVL      +D    ++++ + +++G   D  +G+SL+ MYA+S R+ED+ + F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
             L+ ++ +S+N++V  Y +N    +A  L  ++    V   A  F+S++   + +  + 
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
            G+Q+H  +++ GF SN  I +AL+ MYS+C N++AA ++F  M   + +SWT++I G A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            HG    A+ +F +M   G+KPN + ++AVL+ACSH GL+ E W +F SM   +G+ Q +
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHYA + DLLGR+G L EA  FI  M +     VW T L +C VH + EL +  AE I  
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            D ++  A++L+ N+YAS G W+ +A +R RM+++ L K+  CSWIE  NK H F  G+ 
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           SHP   +I   L  +  ++++ GY+ DT+ VLH+++EE K + LF HSE++AVAFG+I+T
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
                IRV KN+R+C DCH AIK+IS +T REI++RD++RFHH   G CSC DYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715



 Score =  205 bits (522), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 141/523 (26%), Positives = 266/523 (50%), Gaps = 46/523 (8%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSK-LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           L+K+  R ++    K +H+   R++ L   S  +  +IS+Y+    L+EA  +FK++ + 
Sbjct: 11  LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKSP 68

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
             +++W S+I  + ++     A+  FVEM   G CP+   F +V+++C+   ++  G  +
Sbjct: 69  -PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK----------GSV--------------------- 231
           +GF+++ G  D D+  G AL++M+ K          G+V                     
Sbjct: 128 HGFIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186

Query: 232 ----DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
                ++S  +VF+ M  K+ V +  +I    Q G   DA+R+  +M  +   PD FTLS
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V+   SE      GK++H + IR G+  DV +G SLVDMYAK      ++DS +VF R+
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK---SARIEDSERVFSRL 303

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              + +SW +++ GYVQ+ GR  EA++LF  M+  +V P    F+SV+ AC +L   ++ 
Sbjct: 304 YCRDGISWNSLVAGYVQN-GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 362

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +Q++ + ++ G   +  + ++L+ MY++ G ++ ARK F+ +   + VS+  ++  +A +
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCI 526
            +  +A  L  E++  GV  +   F ++L+  S +G + +       + K  G       
Sbjct: 423 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKH 568
           Y A+  +  R   +E A+    +M      S W+++++  + H
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 128/455 (28%), Positives = 223/455 (49%), Gaps = 67/455 (14%)

Query: 33  SPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSR 92
           SPP +A  +     +++ ++        KA+ +   M   G  PD + +  +LKSC    
Sbjct: 67  SPPVLAWKSVIRCFTDQSLF-------SKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK-----------------------CGD- 128
           +   G+ VH  + R  ++ +    N+L+++Y+K                        GD 
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179

Query: 129 ------------LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
                       ++   ++F+ M  ++D+VS++++I+ Y   G   DA+ M  EM     
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVM-PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ +  S+V+   S   +V  G  I+G++++ G  DSDV +G +L+DM+ K S  +E +
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAK-SARIEDS 296

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF ++  ++ + W  ++    Q G   +A+RLF  M+ +   P     S V+ AC+ L
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GKQLH + +R G   ++ +  +LVDMY+KC   G++  +RK+FDRM   + +SWT
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC---GNIKAARKIFDRMNVLDEVSWT 413

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDS-----NVAEQ 409
           AII G+    G   EAV LF +M +  V PN   F +VL AC +  L+D      N   +
Sbjct: 414 AIIMGHALH-GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472

Query: 410 VY--THAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           VY     ++   A+ D +G        R+G++E+A
Sbjct: 473 VYGLNQELEHYAAVADLLG--------RAGKLEEA 499



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 3/208 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR  +A+     M      P    +S ++ +C      HLGK +H  + R     N
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I ++L+ +YSKCG++  A KIF  M N  D VSW+++I  +   G   +A+ +F EM 
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN+  F AV+ ACS+   V      +  + K    + ++    A+ D+  +    
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG-K 495

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRCT 259
           LE AY    KM  E     W+ +++ C+
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCS 523



 Score = 54.3 bits (129), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/297 (19%), Positives = 126/297 (42%), Gaps = 39/297 (13%)

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           A+Q++   + R ++L     + +IS+Y     + +A   F++L    ++++ +++  +  
Sbjct: 24  AKQLHAQFI-RTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
                KA     E+  +G       F S+L   + +  +  GE +H  I++ G + +   
Sbjct: 83  QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142

Query: 527 YNALISMYS--------------------RCAN----------------VEAAFQVFKEM 550
            NAL++MY+                    R +N                +++  +VF+ M
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
             ++V+S+ ++I G+A+ G    AL +  +M    +KP+  T  +VL   S    + +G 
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG- 261

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           K         GI   +   + +VD+  +S  + ++ E + S     D + W + +  
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS-ERVFSRLYCRDGISWNSLVAG 317



 Score = 47.8 bits (112), Expect = 0.026,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 1/117 (0%)

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           + +S     +L+   + I +  + +Q+HA+ I++   S H   + +IS+Y+    +  A 
Sbjct: 1   MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLS-HTSASIVISIYTNLKLLHEAL 59

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            +FK ++   V++W S+I  F      ++AL  F +M A G  P+   + +VL +C+
Sbjct: 60  LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116


>gi|357480925|ref|XP_003610748.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512083|gb|AES93706.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 828

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 278/826 (33%), Positives = 445/826 (53%), Gaps = 52/826 (6%)

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
           TQK  +  L T     K+ I  +  H   L   +   +KL    V + +  SL       
Sbjct: 21  TQKPKNSSLQT----CKTLIELKQLHCNMLKKGVFNINKLIAACVQMGTHESL------- 69

Query: 130 NEANKIFKS-MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVI 187
           N A   FK   G K  + + +++I  Y   G   +AI +++ M+  +G  P+ + F  ++
Sbjct: 70  NYALNAFKEDEGTKCSLYTCNTLIRGYAASGLCKEAIFIYLHMIIVMGIVPDNFTFPFLL 129

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEK 246
            ACS     + G  ++G ++K G    D+ V  +LI  +   G VDL    KVFD+M E+
Sbjct: 130 SACSKIMAFSEGVQVHGVVVKMGLV-KDLFVANSLIHFYAACGKVDL--GRKVFDEMLER 186

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           N V WT +I   + +   ++A+ LF +M+  G  P+  T+   +SAC++L+    GK++ 
Sbjct: 187 NVVSWTSLINGYSVVNMAKEAVCLFFEMVEVGVEPNPVTMVCAISACAKLKDLELGKKVC 246

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           +     G+  +  V  +L+DMY KC   G +   R++FD   D N++ +  I++ YVQ G
Sbjct: 247 NLMTELGVKSNTLVVNALLDMYMKC---GDMYAVREIFDEFSDKNLVMYNTIMSNYVQHG 303

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
               E + +  +M+Q    P+  T  S + AC  L D +V +  + +  + G    D + 
Sbjct: 304 -LAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERLDNIS 362

Query: 427 NSLISMYARSGRMEDARKAFESLF-------------------------------EKNLV 455
           N++I MY + G+ E A K F+S+                                E NLV
Sbjct: 363 NAIIDMYMKCGKREAACKVFDSMSNKTVVTWNSLIAGLVRDGELELALRIFGEMPESNLV 422

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           S+NTM+ A  +    E+A +LL E+++ G+     T   + S    +GA+   + I+  I
Sbjct: 423 SWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKWIYTYI 482

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
            K+    +  +  AL+ M+SRC +   A +VF+ ME R+V +WT+ I   A  G A  A+
Sbjct: 483 EKNDIHIDMQLGTALVDMFSRCGDPLNAMRVFENMEKRDVSAWTAAIRVKAVEGNAKGAI 542

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           E+F +ML   +K +   ++A+L+A SH G + +G + F +M   HG+  ++ HY CMVDL
Sbjct: 543 ELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLFWAMEKIHGVSPQIVHYGCMVDL 602

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           LGR+G L EA + ++SMP+  + ++W +FL ACR H + E   +A E I +  P+    H
Sbjct: 603 LGRAGLLEEAFDLMKSMPIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIH 662

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           +LLSN+YASAG W  VA +R +MKE+   K AG S IE    + +F  G+ SH +  +I 
Sbjct: 663 VLLSNIYASAGKWNDVARVRLQMKEKGFQKVAGSSSIEVHGLIREFTSGDESHTENAQIG 722

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVF 815
             L ++  +I + GY+PDT  VL +++E++K   L +HSEK+A+A+GLI+T K  PIRV 
Sbjct: 723 LMLQEINCRISQVGYVPDTTNVLVDVDEQEKEHLLSRHSEKLAMAYGLINTGKGIPIRVV 782

Query: 816 KNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KNLR+C DCH+  K +S + GREI +RD+NR+H  K+G CSC D+W
Sbjct: 783 KNLRMCSDCHSFAKLVSKLYGREITVRDNNRYHFFKEGFCSCRDFW 828



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 172/433 (39%), Gaps = 76/433 (17%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G   + +  LD M QKG  PD  T    + +C +  +  +GK  H+ + R+ LE  
Sbjct: 299 YVQHGLAGEVLVVLDEMLQKGQRPDKVTMLSTIAACAQLGDLSVGKSSHAYVFRNGLERL 358

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I N++I +Y KCG    A K+F SM NK  +V+W+S+I+  V  G+   A+ +F EM 
Sbjct: 359 DNISNAIIDMYMKCGKREAACKVFDSMSNKT-VVTWNSLIAGLVRDGELELALRIFGEMP 417

Query: 173 E---------LGFCPNEYCFSAVIRACSNTENVAIGH---IIYGFLLKCGYFDS------ 214
           E         +G       F   I      +N  I      + G    CGY  +      
Sbjct: 418 ESNLVSWNTMIGAMVQASMFEEAIDLLREMQNQGIKGDRVTMVGIASACGYLGALDLAKW 477

Query: 215 ------------DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
                       D+ +G AL+DMF +   D  +A +VF+ M +++   WT  I      G
Sbjct: 478 IYTYIEKNDIHIDMQLGTALVDMFSRCG-DPLNAMRVFENMEKRDVSAWTAAIRVKAVEG 536

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             + AI LF +M+      D F    +++A S       G+QL  W      A++   G 
Sbjct: 537 NAKGAIELFDEMLKQDVKADDFVFVALLTAFSHGGYVDQGRQLF-W------AMEKIHGV 589

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           S   ++  C VD                            +   G  +EA  L   M   
Sbjct: 590 SPQIVHYGCMVD---------------------------LLGRAGLLEEAFDLMKSM--- 619

Query: 383 QVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            + PN   + S L AC    N+  +N A++  T        +   + N    +YA +G+ 
Sbjct: 620 PIKPNDVIWGSFLAACRKHKNVEFANYADEKITQLAPEKVGIHVLLSN----IYASAGKW 675

Query: 440 EDARKAFESLFEK 452
            D  +    + EK
Sbjct: 676 NDVARVRLQMKEK 688


>gi|225444173|ref|XP_002268853.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Vitis vinifera]
          Length = 853

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 258/723 (35%), Positives = 421/723 (58%), Gaps = 7/723 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+   A+     M   G  PD  T+  ++K+C    +  LG++VH  +     E +  + 
Sbjct: 126 GQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVG 185

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SLI  YS+ G +++A  +F  M +K D V W+ M++ YV  G   +A  +F+EM     
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F+ V+  C++   +  G  ++G ++  G  + D  V   L+ M+ K    L  A
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSG-LEMDSPVANTLLAMYAKCG-HLFDA 302

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            ++FD M + + V W  MI+   Q G   +A  LF +MI +   PD  T S  +   SE 
Sbjct: 303 RRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEG 362

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GK++H + IR G++LDV +  +L+D+Y KC     V+ +RK+FD+    +++  T
Sbjct: 363 ATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCR---DVEMARKIFDQRTPVDIVVCT 419

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I+GYV +G  +  A+++F  ++Q ++  N  T ASVL AC  L    + ++++ H +K
Sbjct: 420 AMISGYVLNG-MNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILK 478

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G      VG++++ MYA+ GR++ A + F  + +K+ V +N+M+ + ++N   E+A +L
Sbjct: 479 NGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDL 538

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             ++   G      + ++ LS  +++ A+  G++IHA +++  F S+    +ALI MYS+
Sbjct: 539 FRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSK 598

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C N++ A +VF  ME++N +SW S+I  +  HG    +L +F+ ML DGI+P+ +T++A+
Sbjct: 599 CGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAI 658

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           +SAC HAG + EG  +FR M +E GI+ RMEHYACMVDL GR+G L EA   I SMP S 
Sbjct: 659 ISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSP 718

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  VW T LGACR+HG+ EL + A+  + + DPQ+   ++LLSN++A+AG WE V  IR 
Sbjct: 719 DAGVWGTLLGACRLHGNVELAEVASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRS 778

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            MKER + K  GCSWI+ +N  H F   + SHP++ +IY  L  L L++++ GY+P    
Sbjct: 779 LMKERGVQKVPGCSWIDVNNTTHMFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYL 838

Query: 777 VLH 779
            +H
Sbjct: 839 PMH 841



 Score =  248 bits (634), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 159/591 (26%), Positives = 302/591 (51%), Gaps = 13/591 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L++C        G+  H+ +  + +  N ++   L+ +Y  CG   +A  IF  +   R
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL---R 108

Query: 144 DIVS--WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
              S  W+ MI  +   G+   A+  + +ML  G  P++Y F  VI+AC    +VA+G +
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++  +   G F+ DV VG +LI  + +     ++ Y +FD+M  K+ V W +M+    + 
Sbjct: 169 VHDKIQFMG-FELDVFVGSSLIKFYSENGCIHDARY-LFDRMPSKDGVLWNVMLNGYVKN 226

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   +A  +F++M  +   P+  T + V+S C+   +   G QLH   + +GL +D  V 
Sbjct: 227 GDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +L+ MYAKC   G + D+R++FD M   ++++W  +I+GYVQ+G  D EA  LF +MI 
Sbjct: 287 NTLLAMYAKC---GHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMD-EASCLFHEMIS 342

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
            ++ P+  TF+S L            ++++ + ++ G +LD  + ++LI +Y +   +E 
Sbjct: 343 ARMKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEM 402

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           ARK F+     ++V    M+  Y  N  +  A E+   +    +  ++ T AS+L   + 
Sbjct: 403 ARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAG 462

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           + A+  G+++H  I+K+G   +  + +A++ MY++C  ++ A Q F  + D++ + W SM
Sbjct: 463 LAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSM 522

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           IT  +++G    A+++F +M   G K + ++  A LSAC++   +  G K   +      
Sbjct: 523 ITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYG-KEIHAFMMRGA 581

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
               +   + ++D+  + G+L  A     +M    +V  W + + A   HG
Sbjct: 582 FRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEV-SWNSIIAAYGNHG 631



 Score =  215 bits (547), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 174/679 (25%), Positives = 318/679 (46%), Gaps = 63/679 (9%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
           ++++ C++   ++ G   +  +L  G   + + +G  L+ M+V     L+ A  +F ++ 
Sbjct: 51  SILQTCTDPSGLSQGRQAHAQMLVNGIGYNGI-LGTKLLGMYVLCGAFLD-AKNIFYQLR 108

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
              +  W  MI   T +G    A+  +  M+  G LPD++T   V+ AC  L     G+ 
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H      G  LDV VG SL+  Y++   +G + D+R +FDRM   + + W  ++ GYV+
Sbjct: 169 VHDKIQFMGFELDVFVGSSLIKFYSE---NGCIHDARYLFDRMPSKDGVLWNVMLNGYVK 225

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G  D  A  +F +M + +  PN  TFA VL  C + +  N   Q++   V  G  +D  
Sbjct: 226 NGDWDN-ATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSP 284

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V N+L++MYA+ G + DAR+ F+ + + +LV++N M+  Y +N   ++A  L HE+    
Sbjct: 285 VANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAR 344

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +   + TF+S L   S    + +G++IH  II++G   +  + +ALI +Y +C +VE A 
Sbjct: 345 MKPDSITFSSFLPLLSEGATLRQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMAR 404

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           ++F +    +++  T+MI+G+  +G    ALEIF  +L + ++ N +T  +VL AC+   
Sbjct: 405 KIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLA 464

Query: 605 LISEGWK-HFRSMYDEHG-----IVQRMEHYA------------------------CMVD 634
            ++ G + H   + + HG         M+ YA                         M+ 
Sbjct: 465 ALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRLDLAHQTFIGISDKDAVCWNSMIT 524

Query: 635 LLGRSGSLTEALEFIRSMPLSA---DVLVWRTFLGACRVHGDTELGKHA-AEMILEQDPQ 690
              ++G   EA++  R M ++    D +     L AC        GK   A M+      
Sbjct: 525 SCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRS 584

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW---IEA-------DNKVHK 740
           D  A   L ++Y+  G+ +    +   M+E+N +     SW   I A        + ++ 
Sbjct: 585 DLFAESALIDMYSKCGNLDLACRVFDTMEEKNEV-----SWNSIIAAYGNHGRLKDSLNL 639

Query: 741 FH--VGETSHPKTLEIYAELD------QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           FH  +G+   P  +   A +       Q+   I  F  + +   ++  +E    +  LF 
Sbjct: 640 FHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLFG 699

Query: 793 HSEKIAVAFGLISTSKSKP 811
            + ++  AFG+I++    P
Sbjct: 700 RAGRLNEAFGMINSMPFSP 718



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/449 (29%), Positives = 230/449 (51%), Gaps = 26/449 (5%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P T     N +I  ++ +G + +A      M      PD  T+S  L         
Sbjct: 306 FDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISARMKPDSITFSSFLPLLSEGATL 365

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             GK +H  + R+ +  +  + ++LI +Y KC D+  A KIF       DIV  ++MIS 
Sbjct: 366 RQGKEIHCYIIRNGVSLDVFLKSALIDIYFKCRDVEMARKIFDQR-TPVDIVVCTAMISG 424

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YV  G   +A+ +F  +L+     N    ++V+ AC+    + +G  ++G +LK G+  S
Sbjct: 425 YVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGS 484

Query: 215 DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
              VG A++DM+ K G +DL  A++ F  +++K+ V W  MIT C+Q G P +AI LF  
Sbjct: 485 -CYVGSAIMDMYAKCGRLDL--AHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQ 541

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M ++G   D  ++S  +SAC+ L     GK++H++ +R     D+    +L+DMY+KC  
Sbjct: 542 MGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKC-- 599

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G++D + +VFD M + N +SW +II  Y  + GR K+++ LF  M+   + P+H TF +
Sbjct: 600 -GNLDLACRVFDTMEEKNEVSWNSIIAAY-GNHGRLKDSLNLFHGMLGDGIQPDHVTFLA 657

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--------NSLISMYARSGRMEDARKA 445
           ++ ACG+      A QV    +   R + + +G          ++ ++ R+GR+ +A   
Sbjct: 658 IISACGH------AGQV-DEGIHYFRCMTEELGIMARMEHYACMVDLFGRAGRLNEAFGM 710

Query: 446 FESL-FEKNLVSYNTMVDAYAKNLNSEKA 473
             S+ F  +   + T++ A   + N E A
Sbjct: 711 INSMPFSPDAGVWGTLLGACRLHGNVELA 739



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 170/324 (52%), Gaps = 4/324 (1%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L  ++  C++    + G+Q H+  +  G+  +  +G  L+ MY  C   G+  D++ +F 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLC---GAFLDAKNIFY 105

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           ++       W  +I G+   G  D  A+  +  M+     P+ +TF  V+KACG L    
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDF-ALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVA 164

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           +   V+      G  LD  VG+SLI  Y+ +G + DAR  F+ +  K+ V +N M++ Y 
Sbjct: 165 LGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           KN + + A  +  E+  T    ++ TFA +LS  +S   I  G Q+H  ++ SG E +  
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSP 284

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + N L++MY++C ++  A ++F  M   ++++W  MI+G+ ++GF   A  +F++M++  
Sbjct: 285 VANTLLAMYAKCGHLFDARRLFDMMPKTDLVTWNGMISGYVQNGFMDEASCLFHEMISAR 344

Query: 586 IKPNGITYIAVLSACSHAGLISEG 609
           +KP+ IT+ + L   S    + +G
Sbjct: 345 MKPDSITFSSFLPLLSEGATLRQG 368


>gi|302795736|ref|XP_002979631.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
 gi|300152879|gb|EFJ19520.1| hypothetical protein SELMODRAFT_110838 [Selaginella moellendorffii]
          Length = 879

 Score =  472 bits (1214), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 287/833 (34%), Positives = 461/833 (55%), Gaps = 16/833 (1%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P        RLI  H   G  ++A+     M  +G  P    +  +L +C      
Sbjct: 56  FDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPEL 115

Query: 95  -HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
              G+ +H +L  + +E +  +  +L+ +Y KC  + +A K+F  + +KR +V W++MI+
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKR-VVEWNAMIT 174

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           +Y  +     AI +F  ML  G       F  V+ ACS  +++ +  ++    ++    D
Sbjct: 175 AYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHD 233

Query: 214 S--DVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
              D     AL++ +  GS  DLE A++ F +   +  +  T MIT+ TQ     +A+ L
Sbjct: 234 HLHDSSFATALVNFY--GSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALEL 290

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M+L G   DR     V++ACS       G+ +H +         V  G +L++MY K
Sbjct: 291 FKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGK 350

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GS++++ +VF  M   +V+SW  II  + Q   +  EA+ L   M    V  +  +
Sbjct: 351 C---GSLEEAVEVFRSMQHRDVISWNTIIAAHGQHS-QHPEALHLLHLMQLDGVKADKIS 406

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F + L  C           +++  V+ G   D  + N+++ MY      +DA + F ++ 
Sbjct: 407 FVNALPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK 466

Query: 451 EKNLVSYNTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            ++ VS+N M+ AYA     S +A  L  +++  G      +F + LS  ++  ++ +G+
Sbjct: 467 ARDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK 526

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
            +H RI ++G ESN  + NA+++MY++  ++  A ++F +M   +VISW  MI+ FA+HG
Sbjct: 527 LLHDRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLPDVISWNGMISAFAQHG 586

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM-YDEHGIVQRMEH 628
            A + L  F +M  +G  PN +T+++V+SACSH GL+ +G + F S+ +D   I  R EH
Sbjct: 587 HADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEH 646

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y CMVDL+ R+G L  A +FI + PL  D ++  T LGA +VH D E  + +AE ++E  
Sbjct: 647 YYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELT 706

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P   AA+++LSNLY   G  +  A IR+ M E+N+ KE   S I    +VH+F  G+T++
Sbjct: 707 PDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTN 766

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
            +T EI  EL++L+L++ + GY PDT  +LH++ +EQK + L  HSEK+A+AFGLIST+ 
Sbjct: 767 ARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAP 826

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              +R+ KNLRVCGDCHTA K+IS +TGREIV+RDS+RFHH  +G CSC DYW
Sbjct: 827 GTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  246 bits (629), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 185/601 (30%), Positives = 305/601 (50%), Gaps = 18/601 (2%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+ LL     SR+  LGK VH+ + +S ++    + + L+ +Y  CG L +A   F  M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS-NTENVAIG 199
            + D ++W+ +I ++   G    A+H+F  M   G  P    F AV+ ACS + E +  G
Sbjct: 61  VQ-DALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+G +L+    +SD  V   L+ M+ K S  +E A KVFD +  K  V W  MIT   
Sbjct: 120 RRIHG-VLRGTAMESDHYVSTTLLHMYGKCS-SVEDARKVFDGIRHKRVVEWNAMITAYA 177

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK--QLHSWAIRTGLALD 317
           Q      AI++F  M+L G   +R T  GV+ ACS+L+     K  +L           D
Sbjct: 178 QQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHD 237

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
                +LV+ Y  C   G ++ + + F R     +++ TA+IT Y Q    D EA++LF 
Sbjct: 238 SSFATALVNFYGSC---GDLEQAFRAFSRHRLELILA-TAMITQYTQRERWD-EALELFK 292

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV--GNSLISMYAR 435
            M+   V  +     +VL AC       + E    H   R    D  V  GN+LI+MY +
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSG--PRGLEEGRMIHGFMREIRFDRHVNAGNALINMYGK 350

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +E+A + F S+  ++++S+NT++ A+ ++    +A  LLH ++  GV     +F + 
Sbjct: 351 CGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNA 410

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   ++  A+ KG  IH+ I++SG +++  + NA++ MY  C + + A +VF+ M+ R+ 
Sbjct: 411 LPLCAASEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKARDQ 470

Query: 556 ISWTSMITGFAKHG-FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           +SW +MIT +A     ++ AL +F +M   G  P+ I+++A LSAC+    ++EG K   
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG-KLLH 529

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
               E G+   M     ++++  +SGSL  A +    MPL  DV+ W   + A   HG  
Sbjct: 530 DRIRETGLESNMTVANAVLNMYAKSGSLVLARKMFGKMPLP-DVISWNGMISAFAQHGHA 588

Query: 675 E 675
           +
Sbjct: 589 D 589


>gi|347954542|gb|AEP33771.1| organelle transcript processing 82, partial [Thlaspi arvense]
          Length = 673

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 248/658 (37%), Positives = 386/658 (58%), Gaps = 35/658 (5%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VF  + E N + W  M+        P  A++L++ MI  G LP+ +T   ++ +C++
Sbjct: 19  AISVFATIQEPNQLIWNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCAK 78

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
            + F  G+Q+H   ++ G   D+ V  SL+ MYA+   +G ++D+ KVFDR    +V+S+
Sbjct: 79  SKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQ---NGRLEDAHKVFDRSSHRDVVSY 135

Query: 356 TAIITGYVQSG------------------------------GRDKEAVKLFSDMIQGQVA 385
           TA+ITGY  SG                              G  KEA++LF +M++  V 
Sbjct: 136 TALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVR 195

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+  T  +VL AC       +  QV++     G   +  + N+LI +Y++ G++E A   
Sbjct: 196 PDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGQVETACGL 255

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           FE L  K++VS+NT++  Y      ++A  L  E+  +G   +  T  S+L   + +GAI
Sbjct: 256 FEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTIVSILPACAHLGAI 315

Query: 506 GKGEQIHARIIKSGFESNHC--IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
             G  IH  I K   +  +   +  +LI MY++C ++EAA QVF  M  +++ SW +MI 
Sbjct: 316 DIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNAMIF 375

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           GFA HG A    ++F +M  +GI+P+ IT++ +LSACSH+G +  G   F+SM  ++ I 
Sbjct: 376 GFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDYDIT 435

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            ++EHY CM+DLLG SG   EA E I++MP+  D ++W + L ACR HG+ EL +  A  
Sbjct: 436 PKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVIWCSLLKACRRHGNLELAESFARN 495

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           +++ +P++P +++LLSN+YA+AG W+ VA +R  +  + + K  GCS IE D++VH+F V
Sbjct: 496 LMKVEPENPGSYVLLSNIYATAGEWDEVAKVRALLNGKGMKKVPGCSSIEIDSEVHEFIV 555

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+  HP+  EIY  L+++   ++E G++PDT+ VL E+EEE K   L  HSEK+A+AFGL
Sbjct: 556 GDKLHPRNREIYGMLEEMEALLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGL 615

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IST     + + KNLRVC +CH A K +S +  REI+ RD  RFHH +DG CSCND+W
Sbjct: 616 ISTKPGTKLTIVKNLRVCRNCHEATKLVSKIYKREIIARDRTRFHHFRDGVCSCNDFW 673



 Score =  192 bits (487), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 134/508 (26%), Positives = 243/508 (47%), Gaps = 43/508 (8%)

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A  +F ++     ++ W++M+  Y      V A+ ++V M+ LG  PN Y F  ++++C+
Sbjct: 19  AISVFATIQEPNQLI-WNTMLRGYALSSDPVSALKLYVVMISLGLLPNSYTFPFLLKSCA 77

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG---------------------- 229
            ++    G  I+G +LK GY + D+ V  +LI M+ +                       
Sbjct: 78  KSKAFEEGQQIHGHVLKLGY-EPDLYVHTSLISMYAQNGRLEDAHKVFDRSSHRDVVSYT 136

Query: 230 --------SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
                   S ++ SA ++FD++  K+ V W  MI+   + G  ++A+ LF +M+ +   P
Sbjct: 137 ALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAETGSYKEALELFKEMMKTNVRP 196

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D  T+  V+SAC++      G+Q+HSW    G   ++ +  +L+D+Y+KC   G V+ + 
Sbjct: 197 DEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIVNALIDLYSKC---GQVETAC 253

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            +F+ +   +V+SW  +I GY       KEA+ LF +M++   +PN  T  S+L AC +L
Sbjct: 254 GLFEGLSCKDVVSWNTLIGGYTHM-NLYKEALLLFQEMLRSGESPNDVTIVSILPACAHL 312

Query: 402 LDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
              ++   ++ +  K+ + + +   +  SLI MYA+ G +E A + F S+  K+L S+N 
Sbjct: 313 GAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 372

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS- 518
           M+  +A +  +   F+L   +   G+     TF  LLS  S  G +  G  I   + +  
Sbjct: 373 MIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACSHSGKLDLGRHIFKSMTQDY 432

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHGFAARALE 576
                   Y  +I +       + A ++ K   ME   VI W S++    +HG    A E
Sbjct: 433 DITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPDGVI-WCSLLKACRRHGNLELA-E 490

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAG 604
            F + L      N  +Y+ + +  + AG
Sbjct: 491 SFARNLMKVEPENPGSYVLLSNIYATAG 518



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/440 (26%), Positives = 219/440 (49%), Gaps = 40/440 (9%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +M   G  P+  T+  LLKSC +S+ F  G+ +H  + +   EP+  +  SLIS+Y++ G
Sbjct: 56  VMISLGLLPNSYTFPFLLKSCAKSKAFEEGQQIHGHVLKLGYEPDLYVHTSLISMYAQNG 115

Query: 128 DLNEANKIFK------------------SMGNKR------------DIVSWSSMISSYVN 157
            L +A+K+F                   S GN R            D+VSW++MIS Y  
Sbjct: 116 RLEDAHKVFDRSSHRDVVSYTALITGYASSGNIRSAQEMFDEIPVKDVVSWNAMISGYAE 175

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G   +A+ +F EM++    P+E     V+ AC+ + +V +G  ++ ++   G F S++ 
Sbjct: 176 TGSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHG-FGSNLK 234

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           +  ALID++ K    +E+A  +F+ ++ K+ V W  +I   T +   ++A+ LF +M+ S
Sbjct: 235 IVNALIDLYSKCG-QVETACGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRS 293

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTVDG 335
           G  P+  T+  ++ AC+ L     G+ +H +  +    +     +  SL+DMYAKC   G
Sbjct: 294 GESPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKC---G 350

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            ++ + +VF+ ML  ++ SW A+I G+    GR      LFS M +  + P+  TF  +L
Sbjct: 351 DIEAAHQVFNSMLHKSLSSWNAMIFGFAMH-GRANAGFDLFSRMRKNGIEPDDITFVGLL 409

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVG-NSLISMYARSGRMEDARKAFESL-FEKN 453
            AC +    ++   ++    +             +I +   SG  ++A++  +++  E +
Sbjct: 410 SACSHSGKLDLGRHIFKSMTQDYDITPKLEHYGCMIDLLGHSGLFKEAKEMIKTMPMEPD 469

Query: 454 LVSYNTMVDAYAKNLNSEKA 473
            V + +++ A  ++ N E A
Sbjct: 470 GVIWCSLLKACRRHGNLELA 489



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 77/239 (32%), Positives = 124/239 (51%), Gaps = 3/239 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M +    PD  T   +L +C +SR+  LG+ VHS +       N  I+
Sbjct: 177 GSYKEALELFKEMMKTNVRPDEGTMVTVLSACAQSRSVELGRQVHSWIDDHGFGSNLKIV 236

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LYSKCG +  A  +F+ +  K D+VSW+++I  Y +     +A+ +F EML  G 
Sbjct: 237 NALIDLYSKCGQVETACGLFEGLSCK-DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGE 295

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFL-LKCGYFDSDVCVGCALIDMFVKGSVDLES 235
            PN+    +++ AC++   + IG  I+ ++  K     +   +  +LIDM+ K   D+E+
Sbjct: 296 SPNDVTIVSILPACAHLGAIDIGRWIHVYIDKKLKDVTNAPSLRTSLIDMYAKCG-DIEA 354

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           A++VF+ M  K+   W  MI      G       LF  M  +G  PD  T  G++SACS
Sbjct: 355 AHQVFNSMLHKSLSSWNAMIFGFAMHGRANAGFDLFSRMRKNGIEPDDITFVGLLSACS 413


>gi|357520433|ref|XP_003630505.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524527|gb|AET04981.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 998

 Score =  471 bits (1213), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 244/694 (35%), Positives = 413/694 (59%), Gaps = 12/694 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           ++++C +    +    +H L+ +     +  +  SLI  Y+K   +++A  +F  +  K 
Sbjct: 147 VVRACTQFGGLNPALQIHGLVVKGGYVQDVYVCTSLIDFYTKHACIDDARLLFDGLQVKT 206

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
              +W+++I+ Y  +G+   ++ +F +M E   CP++Y  S+V+ AC   + +  G  I+
Sbjct: 207 SF-TWTTIIAGYSKQGRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIH 265

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
            ++L+ G    DV +    ID + K    ++   K+FD+M +KN V WT +I  C Q   
Sbjct: 266 CYVLRSGIV-MDVSMVNGFIDFYFKCH-KVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSF 323

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
            RDA+ LF++M   G+ PD F  + V+++C  L     G+Q+H++AI+  +  D  V   
Sbjct: 324 HRDALDLFVEMARMGWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNG 383

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK--EAVKLFSDMIQ 381
           L+DMYAKC    S+ D+RKVF+ M   +++S+ A+I GY +   +DK  EA+ LF +M  
Sbjct: 384 LIDMYAKC---DSLTDARKVFNLMAAIDLVSYNAMIEGYSR---QDKLCEALDLFREMRL 437

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
              +P    F S+L    +L    ++ Q++   +K G +LD+  G++LI +Y++  R+ D
Sbjct: 438 SLSSPTLLIFVSLLGVSASLYHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGD 497

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           AR  FE + +K++V +  M   Y +   +E++ +L   ++ + +  + +TFA++++ AS+
Sbjct: 498 ARLVFEEIQDKDIVVWTAMFSGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASN 557

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           I ++  G+Q H ++IK GF+ +  + N L+ MY++  ++E A + F     ++   W SM
Sbjct: 558 IASLRHGQQFHNQVIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSM 617

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I  +A+HG A +AL++F  M+ +G+KPN +T++ VLSACSH GL+  G+ HF SM  + G
Sbjct: 618 IATYAQHGEAEKALQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSM-SQFG 676

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           I   +EHY CMV LLGR+G L EA EFI  MP+    +VWR+ L ACRV G+ ELG +AA
Sbjct: 677 IEPGIEHYVCMVSLLGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSACRVSGNVELGTYAA 736

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           EM +  +P D  +++LLSN++AS G W  V  +R++M    ++KE GCSWIE +N++HKF
Sbjct: 737 EMAISCNPADSGSYVLLSNIFASKGMWVNVRRLREKMDISGVVKEPGCSWIEVNNEIHKF 796

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
              +T+H  +  I   LD L L+IK FGY+ +T+
Sbjct: 797 IAKDTAHRDSAPISLVLDNLLLQIKGFGYMANTD 830



 Score =  310 bits (795), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 194/605 (32%), Positives = 327/605 (54%), Gaps = 12/605 (1%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNKR 143
           L + ++S +    K +HS +       + + L N+L+  YSK   +N ANK+F +M +K 
Sbjct: 45  LANLLQSPHIPCCKKIHSKIVVFGFHKHDIFLVNTLLHAYSKLNLVNHANKLFDTMSHK- 103

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVE-MLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           ++V+WSSM+S Y +    ++A+ +FV+ M      PNEY  ++V+RAC+    +     I
Sbjct: 104 NLVTWSSMVSMYTHHSHCLEALMLFVQFMRSCNEKPNEYILASVVRACTQFGGLNPALQI 163

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +G ++K GY   DV V  +LID + K +  ++ A  +FD +  K +  WT +I   ++ G
Sbjct: 164 HGLVVKGGYV-QDVYVCTSLIDFYTKHAC-IDDARLLFDGLQVKTSFTWTTIIAGYSKQG 221

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             + +++LF  M      PD++ LS V+SAC  L+    GKQ+H + +R+G+ +DV +  
Sbjct: 222 RSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMVN 281

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
             +D Y KC     V   RK+FDRM+D NV+SWT +I G +Q+    ++A+ LF +M + 
Sbjct: 282 GFIDFYFKC---HKVQLGRKLFDRMVDKNVVSWTTVIAGCMQNSFH-RDALDLFVEMARM 337

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
              P+ F   SVL +CG+L+      QV+ +A+K     DD V N LI MYA+   + DA
Sbjct: 338 GWNPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVNIDNDDFVKNGLIDMYAKCDSLTDA 397

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           RK F  +   +LVSYN M++ Y++     +A +L  E+  +    +   F SLL  ++S+
Sbjct: 398 RKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASL 457

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
             +    QIH  IIK G   +    +ALI +YS+C+ V  A  VF+E++D++++ WT+M 
Sbjct: 458 YHLELSNQIHGLIIKYGVSLDEFAGSALIDVYSKCSRVGDARLVFEEIQDKDIVVWTAMF 517

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           +G+ +      +L+++  +    +KPN  T+ AV++A S+   +  G + F +   + G 
Sbjct: 518 SGYTQQSENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHG-QQFHNQVIKMGF 576

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
                    +VD+  +SGS+ EA +   S     D   W + +     HG+ E      E
Sbjct: 577 DDDPFVANTLVDMYAKSGSIEEAHKAFISTNWK-DTACWNSMIATYAQHGEAEKALQVFE 635

Query: 683 -MILE 686
            MI+E
Sbjct: 636 DMIME 640



 Score =  227 bits (579), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 149/512 (29%), Positives = 266/512 (51%), Gaps = 14/512 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR Q ++   D M +    PD    S +L +C+  +    GK +H  + RS +  +  ++
Sbjct: 221 GRSQVSLKLFDQMKEGHVCPDKYVLSSVLSACLMLKFLEGGKQIHCYVLRSGIVMDVSMV 280

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N  I  Y KC  +    K+F  M +K ++VSW+++I+  +      DA+ +FVEM  +G+
Sbjct: 281 NGFIDFYFKCHKVQLGRKLFDRMVDK-NVVSWTTVIAGCMQNSFHRDALDLFVEMARMGW 339

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ +  ++V+ +C +   +  G  ++ + +K    D+D  V   LIDM+ K    L  A
Sbjct: 340 NPDAFGCTSVLNSCGSLVALEKGRQVHAYAIKVN-IDNDDFVKNGLIDMYAKCD-SLTDA 397

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF---TLSGVVSAC 293
            KVF+ M   + V +  MI   ++     +A+ LF +M LS   P      +L GV ++ 
Sbjct: 398 RKVFNLMAAIDLVSYNAMIEGYSRQDKLCEALDLFREMRLSLSSPTLLIFVSLLGVSASL 457

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             LEL     Q+H   I+ G++LD   G +L+D+Y+KC+    V D+R VF+ + D +++
Sbjct: 458 YHLEL---SNQIHGLIIKYGVSLDEFAGSALIDVYSKCS---RVGDARLVFEEIQDKDIV 511

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
            WTA+ +GY Q    ++E++KL+  +   ++ PN FTFA+V+ A  N+      +Q +  
Sbjct: 512 VWTAMFSGYTQQ-SENEESLKLYKCLQMSRLKPNEFTFAAVITAASNIASLRHGQQFHNQ 570

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K G   D  V N+L+ MYA+SG +E+A KAF S   K+   +N+M+  YA++  +EKA
Sbjct: 571 VIKMGFDDDPFVANTLVDMYAKSGSIEEAHKAFISTNWKDTACWNSMIATYAQHGEAEKA 630

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            ++  ++   G+  +  TF  +LS  S  G +  G      + + G E     Y  ++S+
Sbjct: 631 LQVFEDMIMEGLKPNYVTFVGVLSACSHTGLLDLGFDHFDSMSQFGIEPGIEHYVCMVSL 690

Query: 534 YSRCANVEAAFQVFKEMEDRN-VISWTSMITG 564
             R   +  A +  ++M  +   + W S+++ 
Sbjct: 691 LGRAGKLYEAKEFIEKMPIKQAAVVWRSLLSA 722


>gi|334185294|ref|NP_187883.2| mitochondrial editing factor 22 [Arabidopsis thaliana]
 gi|75274142|sp|Q9LTV8.1|PP224_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g12770
 gi|11994419|dbj|BAB02421.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641723|gb|AEE75244.1| mitochondrial editing factor 22 [Arabidopsis thaliana]
          Length = 694

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 236/632 (37%), Positives = 375/632 (59%), Gaps = 7/632 (1%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+  A +VFD +       W  +I   ++    +DA+ ++ +M L+   PD FT   ++ 
Sbjct: 68  DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLD 349
           ACS L     G+ +H+   R G   DV V   L+ +YAKC   GS   +R VF+   + +
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS---ARTVFEGLPLPE 184

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             ++SWTAI++ Y Q+G    EA+++FS M +  V P+     SVL A   L D      
Sbjct: 185 RTIVSWTAIVSAYAQNG-EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   VK G  ++  +  SL +MYA+ G++  A+  F+ +   NL+ +N M+  YAKN  
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           + +A ++ HE+ +  V     +  S +S  + +G++ +   ++  + +S +  +  I +A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI M+++C +VE A  VF    DR+V+ W++MI G+  HG A  A+ ++  M   G+ PN
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T++ +L AC+H+G++ EGW  F  M D H I  + +HYAC++DLLGR+G L +A E I
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVI 482

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           + MP+   V VW   L AC+ H   ELG++AA+ +   DP +   ++ LSNLYA+A  W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VA +R RMKE+ L K+ GCSW+E   ++  F VG+ SHP+  EI  +++ +  ++KE G
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++ + +  LH+L +E+  + L  HSE+IA+A+GLIST +  P+R+ KNLR C +CH A K
Sbjct: 603 FVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATK 662

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IS +  REIV+RD+NRFHH KDG CSC DYW
Sbjct: 663 LISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 244/504 (48%), Gaps = 14/504 (2%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           L T  G H D   Y+ L+ S          K +H+ L    L+ +  ++  LI   S  G
Sbjct: 12  LYTNSGIHSD-SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFG 67

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           D+  A ++F  +  +  I  W+++I  Y       DA+ M+  M      P+ + F  ++
Sbjct: 68  DITFARQVFDDL-PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD--KMTE 245
           +ACS   ++ +G  ++  + + G FD+DV V   LI ++ K    L SA  VF+   + E
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLG-FDADVFVQNGLIALYAKCR-RLGSARTVFEGLPLPE 184

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +  V WT +++   Q G P +A+ +F  M      PD   L  V++A + L+    G+ +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  ++ GL ++  +  SL  MYAKC   G V  ++ +FD+M   N++ W A+I+GY ++
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKC---GQVATAKILFDKMKSPNLILWNAMISGYAKN 301

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
            G  +EA+ +F +MI   V P+  +  S + AC  +     A  +Y +  +     D  +
Sbjct: 302 -GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            ++LI M+A+ G +E AR  F+   ++++V ++ M+  Y  +  + +A  L   +E  GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             +  TF  LL   +  G + +G     R+           Y  +I +  R  +++ A++
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYE 480

Query: 546 VFKEMEDR-NVISWTSMITGFAKH 568
           V K M  +  V  W ++++   KH
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKH 504



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/343 (31%), Positives = 189/343 (55%), Gaps = 9/343 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q A+     M      PD  T+  LLK+C    +  +G+ VH+ + R   + +  + N L
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160

Query: 120 ISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           I+LY+KC  L  A  +F+ +   +R IVSW++++S+Y   G+ ++A+ +F +M ++   P
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAY 237
           +     +V+ A +  +++  G  I+  ++K G   + D+ +  +L  M+ K    + +A 
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCG-QVATAK 277

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
            +FDKM   N + W  MI+   + G  R+AI +F +MI     PD  +++  +SAC+++ 
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
                + ++ +  R+    DV +  +L+DM+AKC   GSV+ +R VFDR LD +V+ W+A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC---GSVEGARLVFDRTLDRDVVVWSA 394

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           +I GY    GR +EA+ L+  M +G V PN  TF  +L AC +
Sbjct: 395 MIVGY-GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 125/470 (26%), Positives = 203/470 (43%), Gaps = 64/470 (13%)

Query: 45  PLSNRLIY--------HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           PL  R I         +  +G   +A+     M +    PD      +L +    ++   
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ +H+ + +  LE    +L SL ++Y+KCG +  A  +F  M +  +++ W++MIS Y 
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP-NLILWNAMISGYA 299

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G   +AI MF EM+     P+    ++ I AC+   ++     +Y ++ +  Y D DV
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD-DV 358

Query: 217 CVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            +  ALIDMF K GSV  E A  VFD+  +++ V W+ MI      G  R+AI L+  M 
Sbjct: 359 FISSALIDMFAKCGSV--EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD- 334
             G  P+  T  G++ AC+      SG     W     +A D  +       +  C +D 
Sbjct: 417 RGGVHPNDVTFLGLLMACNH-----SGMVREGWWFFNRMA-DHKINPQ--QQHYACVIDL 468

Query: 335 ----GSVDDSRKVFDRM-LDHNVMSWTAIITG-----YVQSGGRDKEAVKLFSDMIQGQV 384
               G +D + +V   M +   V  W A+++      +V+ G  +  A +LFS      +
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG--EYAAQQLFS------I 520

Query: 385 APN---HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR------ 435
            P+   H+   S L A   L D  VAE        + + L+  VG S + +  R      
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWD-RVAE---VRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576

Query: 436 ----SGRMEDARKAFE----SLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                 R E+  +  E     L E   V+     DA   +LN E+A E L
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANK---DASLHDLNDEEAEETL 623



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 36/353 (10%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +Q++   +  G      +   LI   +  G +  AR+ F+ L    +  +N ++  Y++N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
            + + A  +   ++   V   ++TF  LL   S +  +  G  +HA++ + GF+++  + 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 528 NALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           N LI++Y++C  + +A  VF+   + +R ++SWT++++ +A++G    ALEIF +M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217

Query: 586 IKPNGITYIAVLSACS-----------HAGLISEGWK-------HFRSMYDEHGIV---- 623
           +KP+ +  ++VL+A +           HA ++  G +          +MY + G V    
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 624 ---QRMEH-----YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHG 672
               +M+      +  M+    ++G   EA++    M    +  D +   + + AC   G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 673 DTELGKHAAEMILEQDPQDPA-AHILLSNLYASAGHWEYVANIRKRMKERNLI 724
             E  +   E +   D +D       L +++A  G  E    +  R  +R+++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390


>gi|15221566|ref|NP_177059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75333633|sp|Q9CAA8.1|PP108_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g68930
 gi|12323213|gb|AAG51585.1|AC011665_6 hypothetical protein [Arabidopsis thaliana]
 gi|332196743|gb|AEE34864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  471 bits (1212), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 245/655 (37%), Positives = 382/655 (58%), Gaps = 37/655 (5%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI--LSGFLPDRFTLSGVVSACSEL 296
            F+K+ +++ V W ++I   +  G    A++ +  M+   S  L  R TL  ++   S  
Sbjct: 94  TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT-RVTLMTMLKLSSSN 152

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM--- 353
              + GKQ+H   I+ G    + VG  L+ MYA     G + D++KVF  + D N +   
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV---GCISDAKKVFYGLDDRNTVMYN 209

Query: 354 ---------------------------SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
                                      SW A+I G  Q+G   KEA++ F +M    +  
Sbjct: 210 SLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG-LAKEAIECFREMKVQGLKM 268

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           + + F SVL ACG L   N  +Q++   ++        VG++LI MY +   +  A+  F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + + +KN+VS+  MV  Y +   +E+A ++  +++ +G+    YT    +S  +++ ++ 
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G Q H + I SG      + N+L+++Y +C +++ + ++F EM  R+ +SWT+M++ +A
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           + G A   +++F KM+  G+KP+G+T   V+SACS AGL+ +G ++F+ M  E+GIV  +
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
            HY+CM+DL  RSG L EA+ FI  MP   D + W T L ACR  G+ E+GK AAE ++E
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            DP  PA + LLS++YAS G W+ VA +R+ M+E+N+ KE G SWI+   K+H F   + 
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDE 628

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           S P   +IYA+L++L  KI + GY PDT+FV H++EE  KV+ L  HSE++A+AFGLI  
Sbjct: 629 SSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFV 688

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              +PIRV KNLRVC DCH A K+IS VTGREI++RD+ RFH  KDG CSC D+W
Sbjct: 689 PSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 240/495 (48%), Gaps = 44/495 (8%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +PN    N+L+  YSK G ++E    F+ + + RD V+W+ +I  Y   G    A+  + 
Sbjct: 69  QPNLFSWNNLLLAYSKAGLISEMESTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYN 127

Query: 170 EMLELGFCPN--EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
            M+   F  N        +++  S+  +V++G  I+G ++K G F+S + VG  L+ M+ 
Sbjct: 128 TMMR-DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLYMYA 185

Query: 228 KGSVDLESAYKVFDKMTEKNT------------------------------VGWTLMITR 257
                +  A KVF  + ++NT                              V W  MI  
Sbjct: 186 NVGC-ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKG 244

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G  ++AI  F +M + G   D++    V+ AC  L     GKQ+H+  IRT     
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           + VG +L+DMY KC     +  ++ VFDRM   NV+SWTA++ GY Q+ GR +EAVK+F 
Sbjct: 305 IYVGSALIDMYCKCKC---LHYAKTVFDRMKQKNVVSWTAMVVGYGQT-GRAEEAVKIFL 360

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           DM +  + P+H+T    + AC N+       Q +  A+  G      V NSL+++Y + G
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++D+ + F  +  ++ VS+  MV AYA+   + +  +L  ++   G+     T   ++S
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME-DRN 554
             S  G + KG++ + +++ S +     I  Y+ +I ++SR   +E A +    M    +
Sbjct: 481 ACSRAGLVEKGQR-YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539

Query: 555 VISWTSMITGFAKHG 569
            I WT++++     G
Sbjct: 540 AIGWTTLLSACRNKG 554



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/365 (33%), Positives = 193/365 (52%), Gaps = 16/365 (4%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N+V+ NSL+     CG + +A ++F+ M  ++D VSW++MI      G   +AI  F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM--EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G   ++Y F +V+ AC     +  G  I+  +++   F   + VG ALIDM+ K   
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDHIYVGSALIDMYCKCKC 320

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A  VFD+M +KN V WT M+    Q G   +A+++FLDM  SG  PD +TL   +S
Sbjct: 321 -LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ +     G Q H  AI +GL   V V  SLV +Y KC   G +DDS ++F+ M   +
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC---GDIDDSTRLFNEMNVRD 436

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQ 409
            +SWTA+++ Y Q  GR  E ++LF  M+Q  + P+  T   V+ AC    L++     Q
Sbjct: 437 AVSWTAMVSAYAQF-GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG---Q 492

Query: 410 VYTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
            Y   +     +   +G  + +I +++RSGR+E+A +    + F  + + + T++ A   
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552

Query: 467 NLNSE 471
             N E
Sbjct: 553 KGNLE 557



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 156/308 (50%), Gaps = 8/308 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++AI     M  +G   D   +  +L +C      + GK +H+ + R+  + +  
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++LI +Y KC  L+ A  +F  M  ++++VSW++M+  Y   G+  +A+ +F++M   
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+ Y     I AC+N  ++  G   +G  +  G     V V  +L+ ++ K   D++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY-VTVSNSLVTLYGKCG-DID 423

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            + ++F++M  ++ V WT M++   Q G   + I+LF  M+  G  PD  TL+GV+SACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483

Query: 295 ELELFTSGKQLHSWAI-RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
              L   G++         G+   +     ++D++++    G ++++ +  + M    + 
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR---SGRLEEAMRFINGMPFPPDA 540

Query: 353 MSWTAIIT 360
           + WT +++
Sbjct: 541 IGWTTLLS 548



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 17/214 (7%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR ++A+     M + G  PD  T    + +C    +   G   H     S L     + 
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSL++LY KCGD++++ ++F  M N RD VSW++M+S+Y   G+ V+ I +F +M++ G 
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468

Query: 177 CPNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFVKG 229
            P+    + VI ACS    V  G          YG +   G++         +ID+F + 
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS-------CMIDLFSR- 520

Query: 230 SVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLG 262
           S  LE A +  + M    + +GWT +++ C   G
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 46/273 (16%)

Query: 376 FSDMIQGQVA-----PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           +  MI G +      P  F + +++ A   +  S  A +V+     R    +    N+L+
Sbjct: 24  YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVF----DRIPQPNLFSWNNLL 79

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN---LNSEKAFELLHEIEDTGVGT 487
             Y+++G + +    FE L +++ V++N +++ Y+ +     + KA+  +  + D     
Sbjct: 80  LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM--MRDFSANL 137

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES------------------------- 522
           +  T  ++L  +SS G +  G+QIH ++IK GFES                         
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197

Query: 523 ------NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
                 N  +YN+L+     C  +E A Q+F+ ME ++ +SW +MI G A++G A  A+E
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIE 256

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
            F +M   G+K +   + +VL AC   G I+EG
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           + IH  II++       +YN ++  Y+   +   A +VF  +   N+ SW +++  ++K 
Sbjct: 26  KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           G  +  +E  ++ L D    +G+T+  ++   S +GL+    K + +M
Sbjct: 86  GLISE-MESTFEKLPD---RDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129


>gi|356511265|ref|XP_003524347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 750

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 261/756 (34%), Positives = 413/756 (54%), Gaps = 74/756 (9%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           NSV  N++IS Y +    + A  +F  M +K D+ SW+ M++ Y    +  DA  +F  M
Sbjct: 63  NSVSYNAMISGYLRNAKFSLARDLFDKMPHK-DLFSWNLMLTGYARNRRLRDARMLFDSM 121

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
            E                                         DV    A++  +V+ G 
Sbjct: 122 PE----------------------------------------KDVVSWNAMLSGYVRSGH 141

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-----LDMILSGFLPDRFT 285
           VD   A  VFD+M  KN++ W  ++    + G   +A RLF      ++I    L   + 
Sbjct: 142 VD--EARDVFDRMPHKNSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYV 199

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
              ++    +L      + L SW              +++  YA+   DG +  +R++F+
Sbjct: 200 KRNMLGDARQLFDQIPVRDLISWN-------------TMISGYAQ---DGDLSQARRLFE 243

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
                +V +WTA++  YVQ G  D EA ++F +M Q +    +   A   +     +   
Sbjct: 244 ESPVRDVFTWTAMVYAYVQDGMLD-EARRVFDEMPQKREMSYNVMIAGYAQYKRMDMGRE 302

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           + E++    +           N +IS Y ++G +  AR  F+ + +++ VS+  ++  YA
Sbjct: 303 LFEEMPFPNIGSW--------NIMISGYCQNGDLAQARNLFDMMPQRDSVSWAAIIAGYA 354

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +N   E+A  +L E++  G   +  TF   LS  + I A+  G+Q+H +++++G+E    
Sbjct: 355 QNGLYEEAMNMLVEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGYEKGCL 414

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + NAL+ MY +C  ++ A+ VF+ ++ ++++SW +M+ G+A+HGF  +AL +F  M+  G
Sbjct: 415 VGNALVGMYCKCGCIDEAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAG 474

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +KP+ IT + VLSACSH GL   G ++F SM  ++GI    +HYACM+DLLGR+G L EA
Sbjct: 475 VKPDEITMVGVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRAGCLEEA 534

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
              IR+MP   D   W   LGA R+HG+ ELG+ AAEM+ + +P +   ++LLSNLYA++
Sbjct: 535 QNLIRNMPFEPDAATWGALLGASRIHGNMELGEQAAEMVFKMEPHNSGMYVLLSNLYAAS 594

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W  V+ +R +M++  + K  G SW+E  NK+H F VG+  HP+   IYA L++L LK+
Sbjct: 595 GRWVDVSKMRLKMRQIGVQKTPGYSWVEVQNKIHTFTVGDCFHPEKGRIYAFLEELDLKM 654

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           K  GY+  T  VLH++EEE+K   L  HSEK+AVAFG+++    KPIRV KNLRVC DCH
Sbjct: 655 KHEGYVSSTKLVLHDVEEEEKKHMLKYHSEKLAVAFGILTMPSGKPIRVMKNLRVCEDCH 714

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            AIK+IS + GR I++RDS+R+HH  +G CSC DYW
Sbjct: 715 NAIKHISKIVGRLIIVRDSHRYHHFSEGICSCRDYW 750



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 156/314 (49%), Gaps = 19/314 (6%)

Query: 50  LIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           ++Y ++ DG + +A    D M QK       +Y++++    + +   +G+ +   +    
Sbjct: 256 MVYAYVQDGMLDEARRVFDEMPQKREM----SYNVMIAGYAQYKRMDMGRELFEEMPF-- 309

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
             PN    N +IS Y + GDL +A  +F  M  +RD VSW+++I+ Y   G   +A++M 
Sbjct: 310 --PNIGSWNIMISGYCQNGDLAQARNLFDMM-PQRDSVSWAAIIAGYAQNGLYEEAMNML 366

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           VEM   G   N   F   + AC++   + +G  ++G +++ GY +    VG AL+ M+ K
Sbjct: 367 VEMKRDGESLNRSTFCCALSACADIAALELGKQVHGQVVRTGY-EKGCLVGNALVGMYCK 425

Query: 229 -GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
            G +D   AY VF  +  K+ V W  M+    + G  R A+ +F  MI +G  PD  T+ 
Sbjct: 426 CGCID--EAYDVFQGVQHKDIVSWNTMLAGYARHGFGRQALTVFESMITAGVKPDEITMV 483

Query: 288 GVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           GV+SACS   L   G +  HS     G+  +      ++D+  +    G +++++ +   
Sbjct: 484 GVLSACSHTGLTDRGTEYFHSMNKDYGITPNSKHYACMIDLLGRA---GCLEEAQNLIRN 540

Query: 347 M-LDHNVMSWTAII 359
           M  + +  +W A++
Sbjct: 541 MPFEPDAATWGALL 554



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 76/383 (19%), Positives = 146/383 (38%), Gaps = 77/383 (20%)

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE-------- 481
           IS + R+G  + A   F+++  +N VSYN M+  Y +N     A +L  ++         
Sbjct: 40  ISTHMRNGHCDLALCVFDAMPLRNSVSYNAMISGYLRNAKFSLARDLFDKMPHKDLFSWN 99

Query: 482 -------------------DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
                              D+       ++ ++LSG    G + +   +  R+       
Sbjct: 100 LMLTGYARNRRLRDARMLFDSMPEKDVVSWNAMLSGYVRSGHVDEARDVFDRMP----HK 155

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMED------------------------------ 552
           N   +N L++ Y R   +E A ++F+   D                              
Sbjct: 156 NSISWNGLLAAYVRSGRLEEARRLFESKSDWELISCNCLMGGYVKRNMLGDARQLFDQIP 215

Query: 553 -RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            R++ISW +MI+G+A+ G  ++A  +F +     +     T+ A++ A    G++ E   
Sbjct: 216 VRDLISWNTMISGYAQDGDLSQARRLFEESPVRDV----FTWTAMVYAYVQDGMLDEA-- 269

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
             R ++DE    + M  Y  M+    +   +    E    MP   ++  W   +     +
Sbjct: 270 --RRVFDEMPQKREMS-YNVMIAGYAQYKRMDMGRELFEEMPF-PNIGSWNIMISGYCQN 325

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE--RNLIKEAGC 729
           GD    ++  +M+ ++D    AA I     YA  G +E   N+   MK    +L +   C
Sbjct: 326 GDLAQARNLFDMMPQRDSVSWAAIIA---GYAQNGLYEEAMNMLVEMKRDGESLNRSTFC 382

Query: 730 SWIEADNKVHKFHVGETSHPKTL 752
             + A   +    +G+  H + +
Sbjct: 383 CALSACADIAALELGKQVHGQVV 405


>gi|302791754|ref|XP_002977643.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
 gi|300154346|gb|EFJ20981.1| hypothetical protein SELMODRAFT_107700 [Selaginella moellendorffii]
          Length = 879

 Score =  471 bits (1211), Expect = e-130,   Method: Compositional matrix adjust.
 Identities = 287/833 (34%), Positives = 460/833 (55%), Gaps = 16/833 (1%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P        RLI  H   G  ++A+     M  +G  P    +  +L +C      
Sbjct: 56  FDRMPVQDALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPEL 115

Query: 95  -HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
              G+ +H +L  + +E +  +  +L+ +Y KC  + +A K+F  + +KR +V W++MI+
Sbjct: 116 LEEGRRIHGVLRGTAMESDHYVSTTLLHMYGKCSSVEDARKVFDGIRHKR-VVEWNAMIT 174

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           +Y  +     AI +F  ML  G       F  V+ ACS  +++ +  ++    ++    D
Sbjct: 175 AYAQQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLV-KLCVEEREHD 233

Query: 214 S--DVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
              D     AL++ +  GS  DLE A++ F +   +  +  T MIT+ TQ     +A+ L
Sbjct: 234 HLHDSSFATALVNFY--GSCGDLEQAFRAFSRHRLELILA-TAMITQYTQRERWDEALEL 290

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M+L G   DR     V++ACS       G+ +H +         V  G +L++MY K
Sbjct: 291 FKVMLLEGVKLDRIACMAVLNACSGPRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGK 350

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GS++++ +VF  M   +V+SW  II  + Q   +  EA+ L   M    V  +  +
Sbjct: 351 C---GSLEEAVEVFRSMQHRDVISWNTIIAAHGQHS-QHPEALHLLHLMQLDGVKADKIS 406

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F + L  C           +++  V+ G   D  + N+++ MY      +DA + F ++ 
Sbjct: 407 FVNALPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMK 466

Query: 451 EKNLVSYNTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            ++ VS+N M+ AYA     S +A  L  +++  G      +F + LS  ++  ++ +G+
Sbjct: 467 VRDQVSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEGK 526

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
            +H RI ++G ESN  + NA+++MY++   +  A ++F +M   +VISW  MI+ FA+HG
Sbjct: 527 LLHDRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLPDVISWNGMISAFAQHG 586

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM-YDEHGIVQRMEH 628
            A + L  F +M  +G  PN +T+++V+SACSH GL+ +G + F S+ +D   I  R EH
Sbjct: 587 HADQVLRFFRRMNHEGKLPNDVTFVSVVSACSHGGLVKDGVQLFVSLLHDFPTISPRAEH 646

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y CMVDL+ R+G L  A +FI + PL  D ++  T LGA +VH D E  + +AE ++E  
Sbjct: 647 YYCMVDLIARAGKLDAAEKFIAAAPLKPDRVIHSTMLGASKVHKDVERARKSAEHLMELT 706

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P   AA+++LSNLY   G  +  A IR+ M E+N+ KE   S I    +VH+F  G+T++
Sbjct: 707 PDRSAAYVVLSNLYDEVGKKDEGAKIRRLMYEKNIRKEPAFSSIAVKRRVHEFFTGDTTN 766

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
            +T EI  EL++L+L++ + GY PDT  +LH++ +EQK + L  HSEK+A+AFGLIST+ 
Sbjct: 767 ARTPEILEELERLSLEMAKAGYTPDTTLMLHDVGDEQKKRLLSYHSEKLAIAFGLISTAP 826

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              +R+ KNLRVCGDCHTA K+IS +TGREIV+RDS+RFHH  +G CSC DYW
Sbjct: 827 GTSLRIIKNLRVCGDCHTATKFISKITGREIVVRDSHRFHHFDNGTCSCGDYW 879



 Score =  245 bits (625), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 184/601 (30%), Positives = 305/601 (50%), Gaps = 18/601 (2%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+ LL     SR+  LGK VH+ + +S ++    + + L+ +Y  CG L +A   F  M 
Sbjct: 1   YADLLDVVADSRSLDLGKEVHARICKSAMDRGPFMGDLLVRMYVDCGSLIDAKACFDRMP 60

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS-NTENVAIG 199
            + D ++W+ +I ++   G    A+H+F  M   G  P    F AV+ ACS + E +  G
Sbjct: 61  VQ-DALTWARLIRAHGQIGDSEQALHLFRSMQLEGVAPVNRNFVAVLGACSADPELLEEG 119

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+G +L+    +SD  V   L+ M+ K S  +E A KVFD +  K  V W  MIT   
Sbjct: 120 RRIHG-VLRGTAMESDHYVSTTLLHMYGKCS-SVEDARKVFDGIRHKRVVEWNAMITAYA 177

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK--QLHSWAIRTGLALD 317
           Q      AI++F  M+L G   +R T  GV+ ACS+L+     K  +L           D
Sbjct: 178 QQDHHEQAIQVFYAMLLEGVKAERITFIGVLDACSKLKDLEVAKLVKLCVEEREHDHLHD 237

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
                +LV+ Y  C   G ++ + + F R     +++ TA+IT Y Q    D EA++LF 
Sbjct: 238 SSFATALVNFYGSC---GDLEQAFRAFSRHRLELILA-TAMITQYTQRERWD-EALELFK 292

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV--GNSLISMYAR 435
            M+   V  +     +VL AC       + E    H   R    D  V  GN+LI+MY +
Sbjct: 293 VMLLEGVKLDRIACMAVLNACSG--PRGLEEGRIIHGFMREIRFDRHVNAGNALINMYGK 350

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +E+A + F S+  ++++S+NT++ A+ ++    +A  LLH ++  GV     +F + 
Sbjct: 351 CGSLEEAVEVFRSMQHRDVISWNTIIAAHGQHSQHPEALHLLHLMQLDGVKADKISFVNA 410

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   ++  A+ KG  IH+ I++SG +++  + NA++ MY  C + + A +VF+ M+ R+ 
Sbjct: 411 LPLCATSEALAKGRMIHSWIVESGIKADVMLDNAILDMYGSCKSTDDASRVFRAMKVRDQ 470

Query: 556 ISWTSMITGFAKHG-FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           +SW +MIT +A     ++ AL +F +M   G  P+ I+++A LSAC+    ++EG K   
Sbjct: 471 VSWNAMITAYAAQPRLSSEALLLFQQMQLHGFMPDVISFVAALSACAAQASLAEG-KLLH 529

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
               E G+   M     ++++  +SG+L  A +    MPL  DV+ W   + A   HG  
Sbjct: 530 DRIRETGLESNMTVANAVLNMYAKSGTLVLARKMFGKMPLP-DVISWNGMISAFAQHGHA 588

Query: 675 E 675
           +
Sbjct: 589 D 589


>gi|449508565|ref|XP_004163348.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g23330-like [Cucumis
           sativus]
          Length = 712

 Score =  471 bits (1211), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 239/658 (36%), Positives = 383/658 (58%), Gaps = 30/658 (4%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  + ++F+ +     + W  +I   T  G P  ++  F+ M+ SG  PD      V+ +
Sbjct: 56  LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--------------------- 331
           C+ L     G+ LH + IR GL  D+  G +L++MY+K                      
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175

Query: 332 -------TVDGSVDDS-RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                  TV    +DS RK+F+ M + +++SW  II G  ++G  + E +++  +M    
Sbjct: 176 ERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE-ETLRMIREMGGAN 234

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + P+ FT +SVL      +D +  ++++  ++++G   D  V +SLI MYA+  R+ D+ 
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           + F  L E++ +S+N+++    +N   ++      ++    +   +Y+F+S++   + + 
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
            +  G+Q+H  I ++GF+ N  I ++L+ MY++C N+  A Q+F  M  R+++SWT+MI 
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           G A HG A  A+E+F +M  +GIKPN + ++AVL+ACSH GL+ E WK+F SM  + GI 
Sbjct: 415 GCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWKYFNSMTRDFGIA 474

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             +EHYA + DLLGR+G L EA +FI  M +     +W T L ACRVH + ++ +  A  
Sbjct: 475 PGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHXNIDMAEKVANR 534

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           ILE DP +  A+ILL+N+Y++A  W+  A  R  M+   + K   CSWIE  NKV+ F  
Sbjct: 535 ILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMA 594

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+ SHP   +I   ++ L   +++ GY+PDT+ V H++EEEQK   +  HSE++A+ FG+
Sbjct: 595 GDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGI 654

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           I+T     IRV KNLRVC DCHTA K+IS + GREIV+RD++RFHH K+G CSC DYW
Sbjct: 655 INTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 712



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 134/529 (25%), Positives = 260/529 (49%), Gaps = 42/529 (7%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YS    L+++ ++F ++ +    ++W S+I  Y + G    ++  F+ ML  G  P+  
Sbjct: 49  IYSHINLLHDSLRLFNTI-HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHN 107

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK------------G 229
            F +V+++C+   ++ +G  ++G++++ G  D D+  G AL++M+ K            G
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVG-LDFDLYTGNALMNMYSKLRFLEESGRQRLG 166

Query: 230 SVDL-------------------ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
           + ++                   +S  K+F+ M EK+ V W  +I    + G   + +R+
Sbjct: 167 AGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM 226

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
             +M  +   PD FTLS V+   +E    + GK++H  +IR GL  D+ V  SL+DMYAK
Sbjct: 227 IREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           CT    V DS +VF  + + + +SW +II G VQ+G  D E ++ F  M+  ++ P  ++
Sbjct: 287 CT---RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFD-EGLRFFRQMLMAKIKPKSYS 342

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F+S++ AC +L   ++ +Q++ +  + G   +  + +SL+ MYA+ G +  A++ F+ + 
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            +++VS+  M+   A +  +  A EL  ++E  G+  +   F ++L+  S  G + +  +
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDEAWK 462

Query: 511 IHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKH 568
               + +  G       Y A+  +  R   +E A+     M      S W ++++    H
Sbjct: 463 YFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVH 522

Query: 569 GFAARALEIFYKMLADGIKPNGI-TYIAVLSACSHAGLISEGWKHFRSM 616
                A ++  ++L   + PN    YI + +  S A    E  K   SM
Sbjct: 523 XNIDMAEKVANRILE--VDPNNTGAYILLANIYSAARRWKEAAKWRASM 569



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 207/410 (50%), Gaps = 46/410 (11%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G +PD + +  +LKSC    + +LG+ +H  + R  L+ +    N+L+++YSK   
Sbjct: 97  MLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRF 156

Query: 129 LNEAN--------------------------------KIFKSMGNKRDIVSWSSMISSYV 156
           L E+                                 KIF+ M  K D+VSW+++I+   
Sbjct: 157 LEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEK-DLVSWNTIIAGNA 215

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G   + + M  EM      P+ +  S+V+   +   +++ G  I+G  ++ G  D+D+
Sbjct: 216 RNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQG-LDADI 274

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  +LIDM+ K +   +S  +VF  +TE++ + W  +I  C Q G   + +R F  M++
Sbjct: 275 YVASSLIDMYAKCTRVADSC-RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLM 333

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +   P  ++ S ++ AC+ L     GKQLH +  R G   ++ +  SLVDMYAKC   G+
Sbjct: 334 AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC---GN 390

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +  ++++FDRM   +++SWTA+I G     G+  +A++LF  M    + PNH  F +VL 
Sbjct: 391 IRTAKQIFDRMRLRDMVSWTAMIMGCALH-GQAPDAIELFEQMETEGIKPNHVAFMAVLT 449

Query: 397 AC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
           AC  G L+D       Y +++ R   +   V +  ++  +  R+GR+E+A
Sbjct: 450 ACSHGGLVDE---AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 496



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 91/350 (26%), Positives = 163/350 (46%), Gaps = 38/350 (10%)

Query: 65  TLDLMTQKGN---HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           TL ++ + G     PD  T S +L     + +   GK +H    R  L+ +  + +SLI 
Sbjct: 223 TLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLID 282

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y+KC  + ++ ++F ++  +RD +SW+S+I+  V  G   + +  F +ML     P  Y
Sbjct: 283 MYAKCTRVADSCRVF-TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSY 341

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            FS+++ AC++   + +G  ++G++ + G FD ++ +  +L+DM+ K   ++ +A ++FD
Sbjct: 342 SFSSIMPACAHLTTLHLGKQLHGYITRNG-FDENIFIASSLVDMYAKCG-NIRTAKQIFD 399

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE------ 295
           +M  ++ V WT MI  C   G   DAI LF  M   G  P+      V++ACS       
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGIKPNHVAFMAVLTACSHGGLVDE 459

Query: 296 -----------------LELFTSGKQLHSWAIRTGLALDVCVGCSL-------VDMYAKC 331
                            +E + +   L   A R   A D   G  +         + + C
Sbjct: 460 AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSAC 519

Query: 332 TVDGSVDDSRKVFDRML--DHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
            V  ++D + KV +R+L  D N      ++     +  R KEA K  + M
Sbjct: 520 RVHXNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASM 569



 Score = 44.7 bits (104), Expect = 0.24,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS-MYSRCANVEAAFQVFKEMED 552
           +LL    SI +  + +Q+HA+++K  F+++     +L+  +YS    +  + ++F  +  
Sbjct: 11  ALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHF 68

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
              ++W S+I  +  HG   ++L  F  MLA G+ P+   + +VL +C+
Sbjct: 69  PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117


>gi|50080253|gb|AAT69588.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|222632650|gb|EEE64782.1| hypothetical protein OsJ_19638 [Oryza sativa Japonica Group]
          Length = 870

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 293/874 (33%), Positives = 461/874 (52%), Gaps = 40/874 (4%)

Query: 4   LSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPT-------------TSEPLSNRL 50
           L L A  + P P    P  P+  +LPP   P  +                 T    S  L
Sbjct: 15  LHLLASHRAPQP---LPLTPAHGHLPPRKRPRGVGSAAAPPPPRAAASAEATYSDRSAAL 71

Query: 51  IYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
               + G++ +A++ L+   +    PD   Y  L + C   R    G        R+  E
Sbjct: 72  RALCSHGQLAQALWLLESSPEP---PDEGAYVALFRLCEWRRAVDAGM---RACARADAE 125

Query: 111 PNSVIL---NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
             S  L   N+++S+  + G++  A ++F  M  +RD+ SW+ M+  Y   G   +A+ +
Sbjct: 126 HPSFGLRLGNAMLSMLVRFGEIWHAWRVFAKM-PERDVFSWNVMVGGYGKVGFLEEALDL 184

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           +  ML  G  P+ Y F  V+R C    +  +G  ++  +L+ G+ D +V V  AL+ M+ 
Sbjct: 185 YYRMLWAGMRPDVYTFPCVLRTCGGIPDWRMGREVHAHVLRFGFGD-EVDVLNALVTMYA 243

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K   D+ +A KVFD M   + + W  MI    +       + LFL M+ +   P+  T++
Sbjct: 244 KCG-DIVAARKVFDGMAVTDCISWNAMIAGHFENHECEAGLELFLTMLENEVQPNLMTIT 302

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V  A   L      K++H +A++ G A+DV    SL+ MY   T  G + D+ K+F RM
Sbjct: 303 SVTVASGMLSEVGFAKEMHGFAVKRGFAIDVAFCNSLIQMY---TSLGRMGDAGKIFSRM 359

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              + MSWTA+I+GY ++G  DK A+++++ M    V+P+  T AS L AC  L   +V 
Sbjct: 360 ETKDAMSWTAMISGYEKNGFPDK-ALEVYALMELHNVSPDDVTIASALAACACLGRLDVG 418

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            +++  A  +G      V N+L+ MYA+S  ++ A + F+ + EK++VS+++M+  +  N
Sbjct: 419 IKLHELAQNKGFIRYVVVANALLEMYAKSKHIDKAIEVFKFMAEKDVVSWSSMIAGFCFN 478

Query: 468 LNSEKAFELLHEIEDT--GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
               ++FE L+        V  ++ TF + LS  ++ GA+  G++IHA +++ G  S   
Sbjct: 479 ---HRSFEALYYFRYMLGHVKPNSVTFIAALSACAATGALRSGKEIHAYVLRCGIGSEGY 535

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + NAL+ +Y +C     A+  F    +++V+SW  M++GF  HG    AL +F +M+  G
Sbjct: 536 VPNALLDLYVKCGQTSYAWAQFSVHSEKDVVSWNIMLSGFVAHGLGDIALSLFNQMVEMG 595

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
             P+ +T++A+L ACS AG++ +GW+ F  M ++  IV  ++HYACMVDLL R G LTEA
Sbjct: 596 EHPDEVTFVALLCACSRAGMVIQGWELFHMMTEKFSIVPNLKHYACMVDLLSRVGKLTEA 655

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
              I  MP+  D  VW   L  CR+H   ELG+ AA++ILE +P D A H+LL +LY  A
Sbjct: 656 YNLINRMPIKPDAAVWGALLNGCRIHRHVELGELAAKVILELEPNDVAYHVLLCDLYTDA 715

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W  VA +RK M+E+ L ++ GCSW+E     H F   + SHP+  EI   L  +  ++
Sbjct: 716 GKWAQVARVRKTMREKGLEQDNGCSWVEVKGVTHAFLTDDESHPQIKEINVVLHGIYERM 775

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           K  G+ P  +    E+ E+     L  HSE++AVAFGLI+T+    I V KN   C  CH
Sbjct: 776 KACGFAPVESLEDKEVSED---DILCGHSERLAVAFGLINTTPGTTISVTKNRYTCQSCH 832

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
              K IS +  REI +RD+ + H  KDG CSC D
Sbjct: 833 VIFKAISEIVRREITVRDTKQLHCFKDGDCSCGD 866


>gi|110736949|dbj|BAF00431.1| hypothetical protein [Arabidopsis thaliana]
          Length = 659

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 245/633 (38%), Positives = 375/633 (59%), Gaps = 14/633 (2%)

Query: 239 VFDKMTEKNTV-GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F++  +K  V  W  +I    + G   +A+  F  M      P R +    + ACS L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SGKQ H  A   G   D+ V  +L+ MY+ C   G ++D+RKVFD +   +++SWT+
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC---GKLEDARKVFDEIPKRDIVSWTS 147

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF------ASVLKACGNLLDSNVAEQVY 411
           +I GY    G   +AV LF D++  +   +   F       SV+ AC  +    + E ++
Sbjct: 148 MIRGY-DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206

Query: 412 THAVKRGRALDDCVGNSLISMYARSGR--MEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +  +KRG      VGN+L+  YA+ G   +  ARK F+ + +K+ VSYN+++  YA++  
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 470 SEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           S +AFE+   +    V T +A T +++L   S  GA+  G+ IH ++I+ G E +  +  
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ++I MY +C  VE A + F  M+++NV SWT+MI G+  HG AA+ALE+F  M+  G++P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N IT+++VL+ACSHAGL  EGW+ F +M    G+   +EHY CMVDLLGR+G L +A + 
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ M +  D ++W + L ACR+H + EL + +   + E D  +   ++LLS++YA AG W
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           + V  +R  MK R L+K  G S +E + +VH F +G+  HP+  +IY  L +L  K+ E 
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+ +T+ V H+++EE+K   L  HSEK+A+AFG+++T     + V KNLRVC DCH  I
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IS +  RE V+RD+ RFHH KDG CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 227/443 (51%), Gaps = 13/443 (2%)

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F    +K D+ SW+S+I+     G   +A+  F  M +L   P    F   I+ACS+  
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G   +      GY  SD+ V  ALI M+      LE A KVFD++ +++ V WT M
Sbjct: 91  DIFSGKQTHQQAFVFGY-QSDIFVSSALIVMYSTCG-KLEDARKVFDEIPKRDIVSWTSM 148

Query: 255 ITRCTQLGCPRDAIRLFLDMIL------SGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           I      G   DA+ LF D+++           D   L  V+SACS +      + +HS+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I+ G    V VG +L+D YAK   +G V  +RK+FD+++D + +S+ +I++ Y QS G 
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGG-EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GM 266

Query: 369 DKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             EA ++F  +++ +V   N  T ++VL A  +     + + ++   ++ G   D  VG 
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           S+I MY + GR+E ARKAF+ +  KN+ S+  M+  Y  + ++ KA EL   + D+GV  
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 488 SAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           +  TF S+L+  S  G   +G +  +A   + G E     Y  ++ +  R   ++ A+ +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 547 FKEMEDR-NVISWTSMITGFAKH 568
            + M+ + + I W+S++     H
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIH 469



 Score =  182 bits (461), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 242/509 (47%), Gaps = 50/509 (9%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M +   +P   ++   +K+C    +   GK  H        + +  + 
Sbjct: 55  GDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVS 114

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML---- 172
           ++LI +YS CG L +A K+F  +  KRDIVSW+SMI  Y   G  +DA+ +F ++L    
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEI-PKRDIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173

Query: 173 --ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
             +     +     +VI ACS      +   I+ F++K G FD  V VG  L+D + KG 
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNTLLDAYAKGG 232

Query: 231 V-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSG 288
              +  A K+FD++ +K+ V +  +++   Q G   +A  +F  ++ +  +  +  TLS 
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+ A S       GK +H   IR GL  DV VG S++DMY KC   G V+ +RK FDRM 
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC---GRVETARKAFDRMK 349

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV SWTA+I GY   G   K A++LF  MI   V PN+ TF SVL AC          
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAK-ALELFPAMIDSGVRPNYITFVSVLAAC---------- 398

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
              +HA                 ++    R  +A K    + E  L  Y  MVD   +  
Sbjct: 399 ---SHA----------------GLHVEGWRWFNAMKGRFGV-EPGLEHYGCMVDLLGRAG 438

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             +KA++L+  ++   +   +  ++SLL+       +   E   AR+ +   +S++C Y 
Sbjct: 439 FLQKAYDLIQRMK---MKPDSIIWSSLLAACRIHKNVELAEISVARLFE--LDSSNCGYY 493

Query: 529 ALIS-MYSRCANVEAAFQVFKEMEDRNVI 556
            L+S +Y+     +   +V   M++R ++
Sbjct: 494 MLLSHIYADAGRWKDVERVRMIMKNRGLV 522



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 13/260 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPD---LDTYSLL--LKSCIRSRNFHLGKLVHSLLTR 106
           Y LN   +       DL+  + +  D   LD+  L+  + +C R     L + +HS + +
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211

Query: 107 SKLEPNSVILNSLISLYSKCGD--LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
              +    + N+L+  Y+K G+  +  A KIF  + +K D VS++S++S Y   G   +A
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEA 270

Query: 165 IHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
             +F  +++      N    S V+ A S++  + IG  I+  +++ G  D DV VG ++I
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED-DVIVGTSII 329

Query: 224 DMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           DM+ K G V  E+A K FD+M  KN   WT MI      G    A+ LF  MI SG  P+
Sbjct: 330 DMYCKCGRV--ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387

Query: 283 RFTLSGVVSACSELELFTSG 302
             T   V++ACS   L   G
Sbjct: 388 YITFVSVLAACSHAGLHVEG 407


>gi|356523677|ref|XP_003530462.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Glycine max]
          Length = 852

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/736 (34%), Positives = 428/736 (58%), Gaps = 13/736 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L++G  +K+I     M       D  T+S++LK+C    ++ LG  VH L  +   E +
Sbjct: 113 YLHNGVNRKSIEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFEND 172

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V  ++L+ +YSKC  L+ A +IF+ M  +R++V WS++I+ YV   + ++ + +F +ML
Sbjct: 173 VVTGSALVDMYSKCKKLDGAFRIFREMP-ERNLVCWSAVIAGYVQNDRFIEGLKLFKDML 231

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           ++G   ++  +++V R+C+      +G  ++G  LK   F  D  +G A +DM+ K    
Sbjct: 232 KVGMGVSQSTYASVFRSCAGLSAFKLGTQLHGHALKSD-FAYDSIIGTATLDMYAKCD-R 289

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A+KVF+ +       +  +I    +      A+ +F  +  +    D  +LSG ++A
Sbjct: 290 MSDAWKVFNTLPNPPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTA 349

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS ++    G QLH  A++ GL  ++CV  +++DMY KC   G++ ++  +FD M   + 
Sbjct: 350 CSVIKGHLEGIQLHGLAVKCGLGFNICVANTILDMYGKC---GALVEACTIFDDMERRDA 406

Query: 353 MSWTAIITGYVQSGGRDKEAVK---LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           +SW AII  + Q    ++E VK   LF  M++  + P+ FT+ SV+KAC      N   +
Sbjct: 407 VSWNAIIAAHEQ----NEEIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGME 462

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   VK G  LD  VG++L+ MY + G + +A K  + L EK  VS+N+++  ++    
Sbjct: 463 IHGRIVKSGMGLDWFVGSALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQ 522

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           SE A     ++ + GV    +T+A++L   +++  I  G+QIHA+I+K    S+  I + 
Sbjct: 523 SENAQRYFSQMLEMGVIPDNFTYATVLDVCANMATIELGKQIHAQILKLNLHSDVYIAST 582

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L+ MYS+C N++ +  +F++   R+ ++W++MI  +A HG   +A+++F +M    +KPN
Sbjct: 583 LVDMYSKCGNMQDSRLMFEKTPKRDYVTWSAMICAYAYHGHGEQAIKLFEEMQLLNVKPN 642

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
              +I+VL AC+H G + +G  +F+ M   +G+   MEHY+CMVDLLGRS  + EAL+ I
Sbjct: 643 HTIFISVLRACAHMGYVDKGLHYFQIMQSHYGLDPHMEHYSCMVDLLGRSDQVNEALKLI 702

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            SM   AD ++WRT L  C++ G+ E+ + A   +L+ DPQD +A++LL+N+YA+ G W 
Sbjct: 703 ESMHFEADDVIWRTLLSNCKMQGNVEVAEKAFNSLLQLDPQDSSAYVLLANVYANVGMWG 762

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VA IR  MK   L KE GCSWIE  ++VH F VG+ +HP++ EIY +   L  ++K  G
Sbjct: 763 EVAKIRSIMKNCKLKKEPGCSWIEVRDEVHTFLVGDKAHPRSEEIYEQTHLLVDEMKWAG 822

Query: 770 YLPDTNFVLHELEEEQ 785
           Y+PD + +L E  EEQ
Sbjct: 823 YVPDIDSMLDEEVEEQ 838



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 181/665 (27%), Positives = 328/665 (49%), Gaps = 46/665 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S +L+ C   +  + GK  H+ +  +   P   + N L+  Y K  ++N A K+F  M
Sbjct: 8   TFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKVFDRM 67

Query: 140 ------------------GN------------KRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                             GN            +RD+VSW+S++S Y++ G    +I +FV
Sbjct: 68  PHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSIEIFV 127

Query: 170 EMLELGFCPNEYC-FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            M  L   P++Y  FS V++ACS  E+  +G  ++   ++ G F++DV  G AL+DM+ K
Sbjct: 128 RMRSLKI-PHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMG-FENDVVTGSALVDMYSK 185

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
               L+ A+++F +M E+N V W+ +I    Q     + ++LF DM+  G    + T + 
Sbjct: 186 CK-KLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTYAS 244

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V  +C+ L  F  G QLH  A+++  A D  +G + +DMYAKC     + D+ KVF+ + 
Sbjct: 245 VFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCD---RMSDAWKVFNTLP 301

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           +    S+ AII GY +   +  +A+++F  + +  ++ +  + +  L AC  +       
Sbjct: 302 NPPRQSYNAIIVGYARQ-DQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGI 360

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++  AVK G   + CV N+++ MY + G + +A   F+ +  ++ VS+N ++ A+ +N 
Sbjct: 361 QLHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDMERRDAVSWNAIIAAHEQNE 420

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              K   L   +  + +    +T+ S++   +   A+  G +IH RI+KSG   +  + +
Sbjct: 421 EIVKTLSLFVSMLRSTMEPDDFTYGSVVKACAGQQALNYGMEIHGRIVKSGMGLDWFVGS 480

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ MY +C  +  A ++   +E++  +SW S+I+GF+    +  A   F +ML  G+ P
Sbjct: 481 ALVDMYGKCGMLMEAEKIHDRLEEKTTVSWNSIISGFSSQKQSENAQRYFSQMLEMGVIP 540

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           +  TY  VL  C++   I  G K   +   +  +   +   + +VD+  + G++ ++   
Sbjct: 541 DNFTYATVLDVCANMATIELG-KQIHAQILKLNLHSDVYIASTLVDMYSKCGNMQDSRLM 599

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD--PAAHILLSNLYASAG 706
               P   D + W   + A   HG    G+ A ++  E    +  P   I +S L A A 
Sbjct: 600 FEKTP-KRDYVTWSAMICAYAYHGH---GEQAIKLFEEMQLLNVKPNHTIFISVLRACA- 654

Query: 707 HWEYV 711
           H  YV
Sbjct: 655 HMGYV 659



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 198/415 (47%), Gaps = 35/415 (8%)

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
           +FT S ++  CS L+    GKQ H+  I T     + V   LV  Y K +   +++ + K
Sbjct: 6   KFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSS---NMNYAFK 62

Query: 343 VFDRMLDHNVMSWTAIITGYVQSG------------------------------GRDKEA 372
           VFDRM   +V+SW  +I GY + G                              G ++++
Sbjct: 63  VFDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKS 122

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +++F  M   ++  ++ TF+ VLKAC  + D  +  QV+  A++ G   D   G++L+ M
Sbjct: 123 IEIFVRMRSLKIPHDYATFSVVLKACSGIEDYGLGLQVHCLAIQMGFENDVVTGSALVDM 182

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++  +++ A + F  + E+NLV ++ ++  Y +N    +  +L  ++   G+G S  T+
Sbjct: 183 YSKCKKLDGAFRIFREMPERNLVCWSAVIAGYVQNDRFIEGLKLFKDMLKVGMGVSQSTY 242

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           AS+    + + A   G Q+H   +KS F  +  I  A + MY++C  +  A++VF  + +
Sbjct: 243 ASVFRSCAGLSAFKLGTQLHGHALKSDFAYDSIIGTATLDMYAKCDRMSDAWKVFNTLPN 302

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
               S+ ++I G+A+     +ALEIF  +    +  + I+    L+ACS      EG + 
Sbjct: 303 PPRQSYNAIIVGYARQDQGLKALEIFQSLQRTYLSFDEISLSGALTACSVIKGHLEGIQ- 361

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
              +  + G+   +     ++D+ G+ G+L EA      M    D + W   + A
Sbjct: 362 LHGLAVKCGLGFNICVANTILDMYGKCGALVEACTIFDDME-RRDAVSWNAIIAA 415



 Score = 74.3 bits (181), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/213 (25%), Positives = 94/213 (44%), Gaps = 35/213 (16%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T  +TF+ +L   S++ A+  G+Q HA++I + F     + N L+  Y + +N+  AF+V
Sbjct: 4   TKKFTFSHILQKCSNLKALNPGKQAHAQMIVTSFVPTIYVANCLVQFYCKSSNMNYAFKV 63

Query: 547 FKEMEDRNVISWTSMITGFAK---HGFAA----------------------------RAL 575
           F  M  R+VISW +MI G+A+    GFA                             +++
Sbjct: 64  FDRMPHRDVISWNTMIFGYAEIGNMGFAQSLFDTMPERDVVSWNSLLSCYLHNGVNRKSI 123

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVD 634
           EIF +M +  I  +  T+  VL ACS  G+   G       +  + G    +   + +VD
Sbjct: 124 EIFVRMRSLKIPHDYATFSVVLKACS--GIEDYGLGLQVHCLAIQMGFENDVVTGSALVD 181

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +  +   L  A    R MP   +++ W   +  
Sbjct: 182 MYSKCKKLDGAFRIFREMP-ERNLVCWSAVIAG 213


>gi|224141409|ref|XP_002324065.1| predicted protein [Populus trichocarpa]
 gi|222867067|gb|EEF04198.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 240/678 (35%), Positives = 394/678 (58%), Gaps = 7/678 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC-ALIDMFVKGSVDLESAYKVFDKMT 244
           +++  ++T+N+ +G  I+  L+       +  +   +LI+ + K +  +  A+ +FD+M 
Sbjct: 35  LLKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVN-QVSIAHNLFDRMP 93

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGK 303
           E+N V W+ ++T     G     IRL  DMI  G + P+ + L+  +S+C +      G+
Sbjct: 94  ERNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGR 153

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q H   ++TG +    V  +LV MY+KC++   V D+  V++ +  ++++++ +I++  V
Sbjct: 154 QCHGLLLKTGFSFHNYVRNALVSMYSKCSI---VQDAMGVWNEVPVNDIVAYNSILSSLV 210

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           ++G   +E +++   M+   V  +  TF +    C +L D  +   V+   +      D 
Sbjct: 211 ENGYL-REGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDA 269

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V +++I+MY + G+   AR  F+ L  +N+V +  ++ +  +N   E+A  L  ++E  
Sbjct: 270 YVSSAIINMYGKCGKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFEEALNLFSKMEQE 329

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
            V ++ +T+A LL+  + + A   G  +H    KSGF+ +  + NALI+MY++  ++EAA
Sbjct: 330 NVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEAA 389

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +VF +M  R++I+W +MI GF+ HG   +AL +F  MLA    PN +T+  VLSAC H 
Sbjct: 390 KKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGHL 449

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL+ EG+ +   +  + G+   +EHY C+V LL ++G L EA  F+R+ P+  DV+ WRT
Sbjct: 450 GLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWRT 509

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            L AC VH +  LG+  AE +LE DP D   + LLSN+YA    W+ V  +RK M+++ +
Sbjct: 510 LLNACHVHQNYGLGRWVAEFVLEMDPNDVGTYTLLSNIYAKEKRWDGVVKVRKLMRDKKI 569

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            KE G SWIE  N  H F   +  HP   + Y ++ +L   IK  GY PD   VLH++E+
Sbjct: 570 KKEPGVSWIEIGNVTHIFTSEDNKHPDYGQTYQKVKELLAMIKPLGYTPDIGAVLHDVED 629

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           EQK  YL  HSEK+A+A+GL+       I V KNLR+C DCH+A++ IS VT R IV+RD
Sbjct: 630 EQKEYYLSYHSEKLAIAYGLLKLPSEASILVIKNLRICDDCHSAVRLISKVTNRVIVVRD 689

Query: 844 SNRFHHIKDGKCSCNDYW 861
           +NRFHH +DG+CSC DYW
Sbjct: 690 ANRFHHFRDGRCSCLDYW 707



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 152/582 (26%), Positives = 274/582 (47%), Gaps = 50/582 (8%)

Query: 25  RQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLL 84
           R+   P    PF+ +P    P S                  LDL+              L
Sbjct: 6   RKAYVPFRHAPFLLRPNAVSPSS-----------------PLDLIK-------------L 35

Query: 85  LKSCIRSRNFHLGKLVHS-LLTRSKLEPNSVI-LNSLISLYSKCGDLNEANKIFKSMGNK 142
           LK    ++N  +GK +HS L+  S+   NS+I +NSLI+ Y+K   ++ A+ +F  M  +
Sbjct: 36  LKLSADTKNLKVGKTIHSHLIVTSRATENSIIEVNSLINFYAKVNQVSIAHNLFDRMP-E 94

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHI 201
           R++VSWS++++ Y+  G  +  I +  +M+  G   PNEY  +  I +C +   V  G  
Sbjct: 95  RNVVSWSALMTGYLLNGFSLKVIRLLKDMISEGNVSPNEYILAIAISSCCDRGRVEEGRQ 154

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
            +G LLK G F     V  AL+ M+ K S+ ++ A  V++++   + V +  +++   + 
Sbjct: 155 CHGLLLKTG-FSFHNYVRNALVSMYSKCSI-VQDAMGVWNEVPVNDIVAYNSILSSLVEN 212

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  R+ + +   M+      D+ T     S C+ L+    G  +H   + + +  D  V 
Sbjct: 213 GYLREGLEVLRSMVSESVKWDKVTFVNAFSLCASLKDLRLGLHVHGKMLTSDVECDAYVS 272

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            ++++MY KC   G    +R VFD +   NV+ WTA++    Q+G  + EA+ LFS M Q
Sbjct: 273 SAIINMYGKC---GKSLMARGVFDGLQSRNVVLWTAVMASCFQNGCFE-EALNLFSKMEQ 328

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V  N FT+A +L AC  L        ++ H+ K G      VGN+LI+MYA+SG +E 
Sbjct: 329 ENVKSNEFTYAVLLNACAGLSARRNGSLLHGHSEKSGFKHHVMVGNALINMYAKSGDIEA 388

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A+K F  +  ++++++N M+  ++ +   +KA  +  ++       +  TF  +LS    
Sbjct: 389 AKKVFSDMMHRDIITWNAMICGFSHHGLGKKALLVFQDMLAAEEHPNYVTFTGVLSACGH 448

Query: 502 IGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWT 559
           +G + +G   +H  + + G +     Y  ++S+ S+   +  A    +    + +V++W 
Sbjct: 449 LGLVQEGFYYLHHLMKQFGVQPGLEHYTCIVSLLSKTGQLNEARNFMRTAPVKWDVVAWR 508

Query: 560 SMITGFAKH---GFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +++     H   G      E   +M      PN +    +LS
Sbjct: 509 TLLNACHVHQNYGLGRWVAEFVLEM-----DPNDVGTYTLLS 545


>gi|225428104|ref|XP_002278241.1| PREDICTED: pentatricopeptide repeat-containing protein At4g35130,
           chloroplastic [Vitis vinifera]
 gi|297744563|emb|CBI37825.3| unnamed protein product [Vitis vinifera]
          Length = 802

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/755 (35%), Positives = 428/755 (56%), Gaps = 10/755 (1%)

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           +E NSV L   +S Y + G +  A  +F++M  + D   W+ MI  +V+ G   DA+  +
Sbjct: 56  VERNSVSLTRALSSYVERGYMKNALDLFENM-RQCDTFIWNVMIRGFVDNGLFWDAVDFY 114

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
             M   G   + + +  VI+AC    ++A G  ++G ++K G  D D+ +G +LI M+ K
Sbjct: 115 HRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSG-LDLDIYIGNSLIIMYAK 173

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
               +ESA  VF +M  ++ V W  MI+    +G    ++  F +M  SG   DRF++ G
Sbjct: 174 IGC-IESAEMVFREMPVRDLVSWNSMISGYVSVGDGWRSLSCFREMQASGIKLDRFSVIG 232

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++ ACS      +GK++H   +R+ L LDV V  SLVDMYAKC   G +D + ++FD++ 
Sbjct: 233 ILGACSLEGFLRNGKEIHCQMMRSRLELDVMVQTSLVDMYAKC---GRMDYAERLFDQIT 289

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG-QVAPNHFTFASVLKACGNLLDSNVA 407
           D ++++W A+I GY     +  E+      M +G ++ P+  T  ++L  C  L    + 
Sbjct: 290 DKSIVAWNAMIGGY-SLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLG 348

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           + V+  A++ G      +  +L+ MY   G+++ A   F  + E+NL+S+N M+ +Y KN
Sbjct: 349 KSVHGFAIRNGFLPHLVLETALVDMYGECGKLKPAECLFGQMNERNLISWNAMIASYTKN 408

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
             + KA  L  ++ +  +   A T AS+L   + + ++ + EQIH  + K   +SN  + 
Sbjct: 409 GENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLKLDSNTFVS 468

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           N+++ MY +C N+  A ++F  M  ++VISW ++I  +A HGF   ++E+F +M   G +
Sbjct: 469 NSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFE 528

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           PNG T++++L +CS AGL++EGW++F SM  ++ I   +EHY C++DL+GR+G+L  A  
Sbjct: 529 PNGSTFVSLLLSCSVAGLVNEGWEYFNSMKRDYNINPGIEHYGCILDLIGRTGNLDHAKN 588

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
           FI  MPL+    +W + L A R  GD EL + AAE IL  +  +   ++LLSN+YA AG 
Sbjct: 589 FIEEMPLAPTARIWGSLLTASRNKGDVELAEIAAEHILSLEHDNTGCYVLLSNMYAEAGR 648

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           WE V  I+  MK+  L K  GCS ++  +K  +F   + S  +   +Y  LD ++ KI E
Sbjct: 649 WEDVERIKFHMKKEGLEKSVGCSVVDLSSKTFRFVNQDRSDNEINMVYDVLDIISKKIGE 708

Query: 768 FGYLPD-TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             Y+   T F   +L E+++      HS ++A+ FGLIST+   P+ V KN+R+C  CH 
Sbjct: 709 DVYVHSLTKFRPSDL-EKKRANSAKSHSLRLAICFGLISTTIGNPVLVRKNIRICEACHR 767

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K IS  T REI++RDS  FHH   G CSC DYW
Sbjct: 768 FAKRISETTKREIIVRDSKIFHHFNGGHCSCGDYW 802



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 152/521 (29%), Positives = 263/521 (50%), Gaps = 14/521 (2%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +++G    A+     M   G   D  TY  ++K+C    +   G+ VH  + +S L+ + 
Sbjct: 102 VDNGLFWDAVDFYHRMEFGGVRGDNFTYPFVIKACGGLYDLAEGERVHGKVIKSGLDLDI 161

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I NSLI +Y+K G +  A  +F+ M   RD+VSW+SMIS YV+ G    ++  F EM  
Sbjct: 162 YIGNSLIIMYAKIGCIESAEMVFREMP-VRDLVSWNSMISGYVSVGDGWRSLSCFREMQA 220

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G   + +    ++ ACS    +  G  I+  +++    + DV V  +L+DM+ K G +D
Sbjct: 221 SGIKLDRFSVIGILGACSLEGFLRNGKEIHCQMMR-SRLELDVMVQTSLVDMYAKCGRMD 279

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVS 291
              A ++FD++T+K+ V W  MI   +      ++      M   G L PD  T+  ++ 
Sbjct: 280 Y--AERLFDQITDKSIVAWNAMIGGYSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLP 337

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            C++LE    GK +H +AIR G    + +  +LVDMY +C   G +  +  +F +M + N
Sbjct: 338 PCAQLEAILLGKSVHGFAIRNGFLPHLVLETALVDMYGEC---GKLKPAECLFGQMNERN 394

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SW A+I  Y ++ G +++A+ LF D+    + P+  T AS+L A   L     AEQ++
Sbjct: 395 LISWNAMIASYTKN-GENRKAMTLFQDLCNKTLKPDATTIASILPAYAELASLREAEQIH 453

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            +  K     +  V NS++ MY + G +  AR+ F+ +  K+++S+NT++ AYA +    
Sbjct: 454 GYVTKLKLDSNTFVSNSIVFMYGKCGNLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGR 513

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNA 529
            + EL  E+ + G   +  TF SLL   S  G + +G + +   +K  +  N  I  Y  
Sbjct: 514 ISIELFSEMREKGFEPNGSTFVSLLLSCSVAGLVNEGWE-YFNSMKRDYNINPGIEHYGC 572

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG 569
           ++ +  R  N++ A    +EM        W S++T     G
Sbjct: 573 ILDLIGRTGNLDHAKNFIEEMPLAPTARIWGSLLTASRNKG 613



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 101/403 (25%), Positives = 184/403 (45%), Gaps = 40/403 (9%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN    +   +   +      HPD  T   LL  C +     LGK VH    R+   P
Sbjct: 303 YSLNAQSFESFAYVRKMQEGGKLHPDWITMINLLPPCAQLEAILLGKSVHGFAIRNGFLP 362

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           + V+  +L+ +Y +CG L  A  +F  M N+R+++SW++MI+SY   G+   A+ +F ++
Sbjct: 363 HLVLETALVDMYGECGKLKPAECLFGQM-NERNLISWNAMIASYTKNGENRKAMTLFQDL 421

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
                 P+    ++++ A +   ++     I+G++ K    DS+  V  +++ M+ K   
Sbjct: 422 CNKTLKPDATTIASILPAYAELASLREAEQIHGYVTKLK-LDSNTFVSNSIVFMYGKCG- 479

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L  A ++FD+MT K+ + W  +I      G  R +I LF +M   GF P+  T   ++ 
Sbjct: 480 NLLRAREIFDRMTFKDVISWNTVIMAYAIHGFGRISIELFSEMREKGFEPNGSTFVSLLL 539

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCV-------GCSLVDMYAKCTVDGSVDDSRKVF 344
           +CS   L   G     W     +  D  +       GC ++D+  +    G++D ++   
Sbjct: 540 SCSVAGLVNEG-----WEYFNSMKRDYNINPGIEHYGC-ILDLIGRT---GNLDHAKNFI 590

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH-FTFASVLKACGNLLD 403
           + M     ++ TA I G + +  R+K  V+L       ++A  H  +       C  LL 
Sbjct: 591 EEM----PLAPTARIWGSLLTASRNKGDVEL------AEIAAEHILSLEHDNTGCYVLLS 640

Query: 404 SNVA--------EQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           +  A        E++  H  K G  L+  VG S++ + +++ R
Sbjct: 641 NMYAEAGRWEDVERIKFHMKKEG--LEKSVGCSVVDLSSKTFR 681


>gi|225432698|ref|XP_002278762.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14820
           [Vitis vinifera]
 gi|297737070|emb|CBI26271.3| unnamed protein product [Vitis vinifera]
          Length = 727

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/663 (38%), Positives = 383/663 (57%), Gaps = 35/663 (5%)

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  L+ A  VF+ + +  T      +   ++   P   + ++  M   G   DRF+   +
Sbjct: 69  SSSLDYALSVFNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPL 128

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + A S ++    G ++H  A + G   D  V   LV MYA C   G + ++R +FD+M  
Sbjct: 129 LKALSRVKSLVEGLEIHGLAAKLGFDSDPFVQTGLVRMYAAC---GRIAEARLMFDKMFH 185

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V++W+ +I GY QSG  + +A+ LF +M    V P+    ++VL ACG   + +  + 
Sbjct: 186 RDVVTWSIMIDGYCQSGLFN-DALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKM 244

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRM------------------------------ 439
           ++   ++    +D  + ++L++MYA  G M                              
Sbjct: 245 IHDFIMENNIVVDPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQ 304

Query: 440 -EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
            E+AR  F  + +K+LV ++ M+  YA++ + ++A  L +E++  G+     T  S+++ 
Sbjct: 305 IENARSVFNQMVKKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITA 364

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            + +GA+ + + IH  + K+GF     I NALI MY++C ++E A ++F +M  +NVISW
Sbjct: 365 CAHLGALDQAKWIHLFVDKNGFGGALPINNALIEMYAKCGSLERARRIFDKMPRKNVISW 424

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           T MI+ FA HG A  AL  F++M  + I+PNGIT++ VL ACSHAGL+ EG K F SM +
Sbjct: 425 TCMISAFAMHGDAGSALRFFHQMEDENIEPNGITFVGVLYACSHAGLVEEGRKIFYSMIN 484

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           EH I  +  HY CMVDL GR+  L EALE + +MPL+ +V++W + + ACRVHG+ ELG+
Sbjct: 485 EHNITPKHVHYGCMVDLFGRANLLREALELVEAMPLAPNVIIWGSLMAACRVHGEIELGE 544

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
            AA+ +LE DP    AH+ LSN+YA A  WE V  +RK MK + + KE GCS  E +N++
Sbjct: 545 FAAKRLLELDPDHDGAHVFLSNIYAKARRWEDVGQVRKLMKHKGISKERGCSRFELNNEI 604

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           H+F V + SH    EIY +L ++  K+K  GY P+T  +L +LEEE+K + +  HSEK+A
Sbjct: 605 HEFLVADRSHKHADEIYEKLYEVVSKLKLVGYSPNTCSILVDLEEEEKKEVVLWHSEKLA 664

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           + +GL+       IR+ KNLRVC DCHT IK  S V  REIV+RD  RFHH KDG CSC 
Sbjct: 665 LCYGLMRDGTGSCIRIIKNLRVCEDCHTFIKLASKVYEREIVVRDRTRFHHYKDGVCSCK 724

Query: 859 DYW 861
           DYW
Sbjct: 725 DYW 727



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 249/515 (48%), Gaps = 41/515 (7%)

Query: 98  KLVHSLLTRSKLEPNSVILNSL-ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           K VH+ + RSKL+ ++ +L  L IS  +    L+ A  +F ++  K +    +  +    
Sbjct: 40  KQVHAQILRSKLDRSTSLLVKLVISSCALSSSLDYALSVF-NLIPKPETHLCNRFLRELS 98

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              +    + ++  M   G   + + F  +++A S  +++  G  I+G   K G FDSD 
Sbjct: 99  RSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSLVEGLEIHGLAAKLG-FDSDP 157

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V   L+ M+      +  A  +FDKM  ++ V W++MI    Q G   DA+ LF +M  
Sbjct: 158 FVQTGLVRMYAACG-RIAEARLMFDKMFHRDVVTWSIMIDGYCQSGLFNDALLLFEEMKN 216

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC-TVD- 334
               PD   LS V+SAC      + GK +H + +   + +D  +  +LV MYA C ++D 
Sbjct: 217 YNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIVVDPHLQSALVTMYASCGSMDL 276

Query: 335 --------------------------GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
                                     G ++++R VF++M+  +++ W+A+I+GY +S   
Sbjct: 277 ALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMVKKDLVCWSAMISGYAESDS- 335

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            +EA+ LF++M    + P+  T  SV+ AC +L   + A+ ++    K G      + N+
Sbjct: 336 PQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKWIHLFVDKNGFGGALPINNA 395

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI MYA+ G +E AR+ F+ +  KN++S+  M+ A+A + ++  A    H++ED  +  +
Sbjct: 396 LIEMYAKCGSLERARRIFDKMPRKNVISWTCMISAFAMHGDAGSALRFFHQMEDENIEPN 455

Query: 489 AYTFASLLSGASSIGAIGKGEQI-HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             TF  +L   S  G + +G +I ++ I +      H  Y  ++ ++ R   +  A ++ 
Sbjct: 456 GITFVGVLYACSHAGLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALELV 515

Query: 548 KEME-DRNVISWTSMITGFAKHG------FAARAL 575
           + M    NVI W S++     HG      FAA+ L
Sbjct: 516 EAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRL 550



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 148/557 (26%), Positives = 253/557 (45%), Gaps = 85/557 (15%)

Query: 36  FIAQPTTSEPLSNRLIYHLNDGR-VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
            I +P T   L NR +  L+     +K +   + M  +G   D  ++  LLK+  R ++ 
Sbjct: 81  LIPKPETH--LCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSL 138

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G  +H L  +   + +  +   L+ +Y+ CG + EA  +F  M + RD+V+WS MI  
Sbjct: 139 VEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFH-RDVVTWSIMIDG 197

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G   DA+ +F EM      P+E   S V+ AC    N++ G +I+ F+++      
Sbjct: 198 YCQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYGKMIHDFIMENNIV-V 256

Query: 215 DVCVGCALIDMFVK-GSVDL-----------------------------ESAYKVFDKMT 244
           D  +  AL+ M+   GS+DL                             E+A  VF++M 
Sbjct: 257 DPHLQSALVTMYASCGSMDLALNLFEKMTPKNLVASTAMVTGYSKLGQIENARSVFNQMV 316

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +K+ V W+ MI+   +   P++A+ LF +M   G  PD+ T+  V++AC+ L      K 
Sbjct: 317 KKDLVCWSAMISGYAESDSPQEALNLFNEMQSLGIKPDQVTMLSVITACAHLGALDQAKW 376

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H +  + G    + +  +L++MYAKC   GS++ +R++FD+M   NV+SWT +I+ +  
Sbjct: 377 IHLFVDKNGFGGALPINNALIEMYAKC---GSLERARRIFDKMPRKNVISWTCMISAFAM 433

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
            G     A++ F  M    + PN  TF  VL AC             +HA          
Sbjct: 434 HGDAGS-ALRFFHQMEDENIEPNGITFVGVLYAC-------------SHA---------- 469

Query: 425 VGNSLISMYARSGRMEDARKAFESLF-EKNL----VSYNTMVDAYAKNLNSEKAFELLHE 479
                       G +E+ RK F S+  E N+    V Y  MVD + +     +A EL   
Sbjct: 470 ------------GLVEEGRKIFYSMINEHNITPKHVHYGCMVDLFGRANLLREALEL--- 514

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS-MYSRCA 538
           +E   +  +   + SL++     G I  GE    R+++   + +H   +  +S +Y++  
Sbjct: 515 VEAMPLAPNVIIWGSLMAACRVHGEIELGEFAAKRLLE--LDPDHDGAHVFLSNIYAKAR 572

Query: 539 NVEAAFQVFKEMEDRNV 555
             E   QV K M+ + +
Sbjct: 573 RWEDVGQVRKLMKHKGI 589



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 68/267 (25%), Positives = 120/267 (44%), Gaps = 5/267 (1%)

Query: 387 NHFTFASVLKACGNLLD-SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           +H T  S L +  +L     V  Q+    + R  +L   +   +IS  A S  ++ A   
Sbjct: 22  SHHTLFSALSSATSLTHLKQVHAQILRSKLDRSTSL---LVKLVISSCALSSSLDYALSV 78

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  + +      N  +   +++   EK   +   +   G+    ++F  LL   S + ++
Sbjct: 79  FNLIPKPETHLCNRFLRELSRSEEPEKTLLVYERMRTQGLAVDRFSFPPLLKALSRVKSL 138

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
            +G +IH    K GF+S+  +   L+ MY+ C  +  A  +F +M  R+V++W+ MI G+
Sbjct: 139 VEGLEIHGLAAKLGFDSDPFVQTGLVRMYAACGRIAEARLMFDKMFHRDVVTWSIMIDGY 198

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            + G    AL +F +M    ++P+ +    VLSAC  AG +S G K       E+ IV  
Sbjct: 199 CQSGLFNDALLLFEEMKNYNVEPDEMMLSTVLSACGRAGNLSYG-KMIHDFIMENNIVVD 257

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSM 652
               + +V +    GS+  AL     M
Sbjct: 258 PHLQSALVTMYASCGSMDLALNLFEKM 284


>gi|224124974|ref|XP_002319471.1| predicted protein [Populus trichocarpa]
 gi|222857847|gb|EEE95394.1| predicted protein [Populus trichocarpa]
          Length = 703

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 265/758 (34%), Positives = 424/758 (55%), Gaps = 65/758 (8%)

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           RS    ++ I    IS +++ G ++ A  IF  + +K  + SW+++++ Y +  +  +A 
Sbjct: 9   RSYFSSSAAITQCQISYFARLGQIDRARNIFDDLQSK-TVTSWNAIVAGYFHNKRPAEAQ 67

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F +M E     N   ++ ++        ++    ++  +      + +V    +++  
Sbjct: 68  KLFDKMPE----RNTISWNGLVSGYVKNGMISEARKVFDKMP-----ERNVVSWTSMVRG 118

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           +V+  + ++ A  +F +M EKN V WT+M+    + G   +A RLF DMI    + D   
Sbjct: 119 YVQEGL-IDEAELLFWRMPEKNVVSWTVMLGGLIEDGRVDEARRLF-DMIP---VKDVVA 173

Query: 286 LSGVVSA-CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
            + ++   CSE  L  + +       R     +V    S++  YA   ++  VD +RK+F
Sbjct: 174 STNMIGGLCSEGRLSEAREIFDEMPQR-----NVVAWTSMISGYA---MNNKVDVARKLF 225

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           + M D N ++WTA++ GY +SG R  EA +LF  M    VA           AC      
Sbjct: 226 EVMPDKNEVTWTAMLKGYTRSG-RINEAAELFKAMPVKPVA-----------AC------ 267

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
                                 N +I  +  +G +  AR  F+ + EK+  +++ ++  Y
Sbjct: 268 ----------------------NGMIMGFGLNGEVGKARWVFDQMKEKDDGTWSALIKIY 305

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
            +     +A  L   ++  GV  +  +  S+LS   S+ ++  G Q+H+++++S F+ + 
Sbjct: 306 ERKGFELEALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDI 365

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
            + + LI+MY +C ++    +VF     ++++ W S+I G+A+HGF  +ALE+F++M + 
Sbjct: 366 YVSSVLITMYIKCGDLVTGKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHEMFSS 425

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
           G  P+ IT+I VLSAC + G + EG + F SM  ++ + Q+ EHYACMVDLLGR+G L E
Sbjct: 426 GAAPDEITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAGKLNE 485

Query: 645 ALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYAS 704
           A+  I +MP+ AD +VW   L ACR H + +L + AA+ +L+ +P     +ILLSNLYAS
Sbjct: 486 AMNLIENMPVEADAIVWGALLSACRTHKNLDLAEIAAKKLLQLEPSSAGPYILLSNLYAS 545

Query: 705 AGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH-VGETSHPKTLEIYAELDQLAL 763
              W+ VA +RK M+ RN+ K  GCSWIE DNKVH F   G  SHP+   I  +L++L  
Sbjct: 546 QSRWKDVAELRKTMRARNVSKSPGCSWIEVDNKVHMFTGGGSASHPEHEMIMKKLEKLGA 605

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
            ++E GY PD +FV+H+++EE KV  L  HSEK+AVA+GL+     KPIRV KNLRVCGD
Sbjct: 606 SLREAGYCPDGSFVMHDVDEEDKVHSLRHHSEKMAVAYGLLKVPVGKPIRVMKNLRVCGD 665

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH+AIK I+ VTGREI+LRD+NRFHH KDG CSC D+W
Sbjct: 666 CHSAIKLIAQVTGREIILRDANRFHHFKDGLCSCRDFW 703



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 3/199 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+    LM ++G  P+  +   +L  C    +   G+ VHS L RS  + +  + + LI
Sbjct: 313 EALALFSLMQREGVRPNFPSIISILSVCGSLASLDHGRQVHSQLVRSHFDLDIYVSSVLI 372

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           ++Y KCGDL    ++F    +K DIV W+S+I+ Y   G    A+ +F EM   G  P+E
Sbjct: 373 TMYIKCGDLVTGKRVFDRFSSK-DIVMWNSIIAGYAQHGFGEKALEVFHEMFSSGAAPDE 431

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             F  V+ AC  T  V  G  I+  +      D        ++D+  +    L  A  + 
Sbjct: 432 ITFIGVLSACGYTGKVKEGLEIFESMKSKYQVDQKTEHYACMVDLLGRAG-KLNEAMNLI 490

Query: 241 DKM-TEKNTVGWTLMITRC 258
           + M  E + + W  +++ C
Sbjct: 491 ENMPVEADAIVWGALLSAC 509


>gi|62320270|dbj|BAD94552.1| hypothetical protein [Arabidopsis thaliana]
          Length = 694

 Score =  470 bits (1210), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 236/632 (37%), Positives = 375/632 (59%), Gaps = 7/632 (1%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+  A +VFD +       W  +I   ++    +DA+ ++ +M L+   PD FT   ++ 
Sbjct: 68  DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLD 349
           ACS L     G+ +H+   R G   DV V   L+ +YAKC   GS   +R VF+   + +
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS---ARTVFEGLPLPE 184

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             ++SWTAI++ Y Q+G    EA+++FS M +  V P+     SVL A   L D      
Sbjct: 185 RTIVSWTAIVSAYAQNG-EPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   VK G  ++  +  SL +MYA+ G++  A+  F+ +   NL+ +N M+  YAKN  
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           + +A ++ HE+ +  V     +  S +S  + +G++ +   ++  + +S +  +  I +A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI M+++C +VE A  VF    DR+V+ W++MI G+  HG A  A+ ++  M   G+ PN
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T++ +L AC+H+G++ EGW  F  M D H I  + +HYAC++DLLGR+G L +A E I
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNLMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVI 482

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           + MP+   V VW   L AC+ H   ELG++AA+ +   DP +   ++ LSNLYA+A  W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VA +R RMKE+ L K+ GCSW+E   ++  F VG+ SHP+  EI  +++ +  ++KE G
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++ + +  LH+L +E+  + L  HSE+IA+A+GLIST +  P+R+ KNLR C +CH A K
Sbjct: 603 FVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATK 662

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IS +  REIV+RD+NRFHH KDG CSC DYW
Sbjct: 663 LISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 243/504 (48%), Gaps = 14/504 (2%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           L T  G H D   Y+ L+ S          K +H+ L    L+ +  ++  LI   S  G
Sbjct: 12  LYTNSGIHSD-SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFG 67

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           D+  A ++F  +  +  I  W+++I  Y       DA+ M+  M      P+ + F  ++
Sbjct: 68  DITFARQVFDDL-PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD--KMTE 245
           +ACS   ++ +G  ++  + + G FD+DV V   LI ++ K    L SA  VF+   + E
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLG-FDADVFVQNGLIALYAKCR-RLGSARTVFEGLPLPE 184

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +  V WT +++   Q G P +A+ +F  M      PD   L  V++A + L+    G+ +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  ++ GL ++  +  SL  MYAKC   G V  ++ +FD+M   N++ W A+I+GY ++
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKC---GQVATAKILFDKMKSPNLILWNAMISGYAKN 301

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
            G  +EA+ +F +MI   V P+  +  S + AC  +     A  +Y +  +     D  +
Sbjct: 302 -GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            ++LI M+A+ G +E AR  F+   ++++V ++ M+  Y  +  + +A  L   +E  GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             +  TF  LL   +  G + +G      +           Y  +I +  R  +++ A++
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNLMADHKINPQQQHYACVIDLLGRAGHLDQAYE 480

Query: 546 VFKEMEDR-NVISWTSMITGFAKH 568
           V K M  +  V  W ++++   KH
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKH 504



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 204/473 (43%), Gaps = 70/473 (14%)

Query: 45  PLSNRLIY--------HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           PL  R I         +  +G   +A+     M +    PD      +L +    ++   
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ +H+ + +  LE    +L SL ++Y+KCG +  A  +F  M +  +++ W++MIS Y 
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP-NLILWNAMISGYA 299

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G   +AI MF EM+     P+    ++ I AC+   ++     +Y ++ +  Y D DV
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD-DV 358

Query: 217 CVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            +  ALIDMF K GSV  E A  VFD+  +++ V W+ MI      G  R+AI L+  M 
Sbjct: 359 FISSALIDMFAKCGSV--EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD---MYAKCT 332
             G  P+  T  G++ AC+           HS  +R G      +    ++    +  C 
Sbjct: 417 RGGVHPNDVTFLGLLMACN-----------HSGMVREGWWFFNLMADHKINPQQQHYACV 465

Query: 333 VD-----GSVDDSRKVFDRM-LDHNVMSWTAIITG-----YVQSGGRDKEAVKLFSDMIQ 381
           +D     G +D + +V   M +   V  W A+++      +V+ G  +  A +LFS    
Sbjct: 466 IDLLGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG--EYAAQQLFS---- 519

Query: 382 GQVAPN---HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR--- 435
             + P+   H+   S L A   L D  VAE        + + L+  VG S + +  R   
Sbjct: 520 --IDPSNTGHYVQLSNLYAAARLWD-RVAE---VRVRMKEKGLNKDVGCSWVEVRGRLEA 573

Query: 436 -------SGRMEDARKAFE----SLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                    R E+  +  E     L E   V+     DA   +LN E+A E L
Sbjct: 574 FRVGDKSHPRYEEIERQVEWIESRLKEGGFVANK---DASLHDLNDEEAEETL 623



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 76/353 (21%), Positives = 161/353 (45%), Gaps = 36/353 (10%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +Q++   +  G      +   LI   +  G +  AR+ F+ L    +  +N ++  Y++N
Sbjct: 38  KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
            + + A  +   ++   V   ++TF  LL   S +  +  G  +HA++ + GF+++  + 
Sbjct: 98  NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157

Query: 528 NALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           N LI++Y++C  + +A  VF+   + +R ++SWT++++ +A++G    ALEIF  M    
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSHMRKMD 217

Query: 586 IKPNGITYIAVLSACS-----------HAGLISEGWK-------HFRSMYDEHGIV---- 623
           +KP+ +  ++VL+A +           HA ++  G +          +MY + G V    
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277

Query: 624 ---QRMEH-----YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHG 672
               +M+      +  M+    ++G   EA++    M    +  D +   + + AC   G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337

Query: 673 DTELGKHAAEMILEQDPQDPA-AHILLSNLYASAGHWEYVANIRKRMKERNLI 724
             E  +   E +   D +D       L +++A  G  E    +  R  +R+++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390


>gi|297838665|ref|XP_002887214.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333055|gb|EFH63473.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 740

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/661 (36%), Positives = 387/661 (58%), Gaps = 37/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD--RFTLSGVV 290
           L    + F+K+ +++ V W ++I   +  G    A++ + + ++  F  +  R TL  ++
Sbjct: 85  LSEMERTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAY-NTMMKDFSSNLTRVTLMTML 143

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
              S     + GKQ+H   I+ G    + VG  L+DMY+K    G + D++KVF  + D 
Sbjct: 144 KLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLDMYSKV---GCISDAKKVFYGLDDR 200

Query: 351 NVM------------------------------SWTAIITGYVQSGGRDKEAVKLFSDMI 380
           N +                              SW+A+I G  Q+G  +KEA++ F +M 
Sbjct: 201 NTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAMIKGLAQNG-MEKEAIECFREMK 259

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              +  + + F SVL ACG L   N   Q++   ++        VG++LI MY +   + 
Sbjct: 260 IEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDHIYVGSALIDMYCKCKCLH 319

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A+  F+ + +KN+VS+  MV  Y +   + +A ++  +++ +G+    YT    +S  +
Sbjct: 320 YAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIFLDMQRSGIDPDHYTLGQAISACA 379

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           +I ++ +G Q H + I +G      + N+L+++Y +C +++ + ++F EM  R+ +SWT+
Sbjct: 380 NISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCGDIDDSTRLFNEMNVRDEVSWTA 439

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           M++ +A+ G A  A+++F KM+  G+KP+G+T   V+SACS AGL+ +G ++F  M +E+
Sbjct: 440 MVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVISACSRAGLVEKGQRYFELMINEY 499

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GIV    HY+CM+DL  RSG + EA+ FI  MP   D + W T L ACR  G+ E+GK A
Sbjct: 500 GIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDAIGWTTLLSACRNKGNLEIGKWA 559

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE ++E DP  PA + LLS++YAS G W+ VA +R+ MKE+N+ KE G SWI+   K+H 
Sbjct: 560 AESLIELDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIKWKGKLHS 619

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F   + S P + +IYA+L++L  KI + GY PDT+FV H++EE  K++ L  HSE++A+A
Sbjct: 620 FSADDESSPYSDQIYAKLEELYQKIIDNGYKPDTSFVHHDVEEAVKIKMLNCHSERLAIA 679

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLI      PIRV KNLRVC DCH A K+IS VTGREI++RD+ RFH  KDG CSC D+
Sbjct: 680 FGLIFVPSGLPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDF 739

Query: 861 W 861
           W
Sbjct: 740 W 740



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/494 (29%), Positives = 247/494 (50%), Gaps = 42/494 (8%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +PN    N+L+  YSK G L+E  + F+ + + RD V+W+ +I  Y   G    A+  + 
Sbjct: 66  QPNLFSWNNLLLAYSKSGHLSEMERTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYN 124

Query: 170 EMLELGFCPN--EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
            M++  F  N        +++  S+  +V++G  I+G ++K G F+S + VG  L+DM+ 
Sbjct: 125 TMMK-DFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLDMYS 182

Query: 228 K-GSVD-----------------------------LESAYKVFDKMTEKNTVGWTLMITR 257
           K G +                              +E A ++F  M EK++V W+ MI  
Sbjct: 183 KVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM-EKDSVSWSAMIKG 241

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q G  ++AI  F +M + G   D++    V+ AC  L     G+Q+H+  IRT L   
Sbjct: 242 LAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNLQDH 301

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           + VG +L+DMY KC     +  ++ VFDRM   NV+SWTA++ GY Q+ GR  EAVK+F 
Sbjct: 302 IYVGSALIDMYCKCKC---LHYAKTVFDRMKQKNVVSWTAMVVGYGQT-GRAGEAVKIFL 357

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           DM +  + P+H+T    + AC N+       Q +  A+  G      V NSL+++Y + G
Sbjct: 358 DMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKCG 417

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++D+ + F  +  ++ VS+  MV AYA+   + +A +L  ++   G+     T   ++S
Sbjct: 418 DIDDSTRLFNEMNVRDEVSWTAMVSAYAQFGRAVEAIQLFDKMVQLGLKPDGVTLTGVIS 477

Query: 498 GASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NV 555
             S  G + KG++    +I   G   ++  Y+ +I ++SR   +E A      M  R + 
Sbjct: 478 ACSRAGLVEKGQRYFELMINEYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMPFRPDA 537

Query: 556 ISWTSMITGFAKHG 569
           I WT++++     G
Sbjct: 538 IGWTTLLSACRNKG 551



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 174/640 (27%), Positives = 284/640 (44%), Gaps = 113/640 (17%)

Query: 12  IPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNR-------LI--YHLNDGRVQKA 62
           IP P+ F  +N     L  S S        T E L +R       LI  Y L+ G V  A
Sbjct: 64  IPQPNLFSWNNLL---LAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLS-GLVGAA 119

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH--LGKLVHSLLTRSKLEPNSVILNSLI 120
           +   + M  K    +L   +L+    + S N H  LGK +H  + +   E   ++ + L+
Sbjct: 120 VKAYNTM-MKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLL 178

Query: 121 SLYSKCGDLNEANKIFKSM-----------------------------GNKRDIVSWSSM 151
            +YSK G +++A K+F  +                             G ++D VSWS+M
Sbjct: 179 DMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVSWSAM 238

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           I      G + +AI  F EM   G   ++Y F +V+ AC     +  G  I+  +++   
Sbjct: 239 IKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACIIRTNL 298

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
            D  + VG ALIDM+ K    L  A  VFD+M +KN V WT M+    Q G   +A+++F
Sbjct: 299 QDH-IYVGSALIDMYCKCKC-LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAGEAVKIF 356

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           LDM  SG  PD +TL   +SAC+ +     G Q H  AI  GL   + V  SLV +Y KC
Sbjct: 357 LDMQRSGIDPDHYTLGQAISACANISSLEEGSQFHGKAITAGLIHYITVSNSLVTLYGKC 416

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +DDS ++F+ M   + +SWTA+++ Y Q  GR  EA++LF  M+Q  + P+  T 
Sbjct: 417 ---GDIDDSTRLFNEMNVRDEVSWTAMVSAYAQF-GRAVEAIQLFDKMVQLGLKPDGVTL 472

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF- 450
             V+ AC                                   +R+G +E  ++ FE +  
Sbjct: 473 TGVISAC-----------------------------------SRAGLVEKGQRYFELMIN 497

Query: 451 EKNLVS----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           E  +V     Y+ M+D ++++   E+A   ++ +        A  + +LLS   + G + 
Sbjct: 498 EYGIVPSNGHYSCMIDLFSRSGRIEEAMGFINGMP---FRPDAIGWTTLLSACRNKGNLE 554

Query: 507 KGEQIHARIIKSGFESNH-CIYNALISMYSRCANVEAAFQVFKEMEDRNV--------IS 557
            G+     +I+   + +H   Y  L S+Y+     +   Q+ + M+++NV        I 
Sbjct: 555 IGKWAAESLIE--LDPHHPAGYTLLSSIYASKGKWDCVAQLRRGMKEKNVRKEPGQSWIK 612

Query: 558 WTSMITGFA--------KHGFAARALEIFYKMLADGIKPN 589
           W   +  F+             A+  E++ K++ +G KP+
Sbjct: 613 WKGKLHSFSADDESSPYSDQIYAKLEELYQKIIDNGYKPD 652



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 116/457 (25%), Positives = 206/457 (45%), Gaps = 59/457 (12%)

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE-------LFTSGK 303
           ++  I +C  LG  R    +  ++I +   P+ F  + +V A + +        +F    
Sbjct: 6   YSAQIKQCIGLGASRHVKMIHGNIIRTLPHPETFLHNNIVHAYALIRSSIYARRVFDGIP 65

Query: 304 Q--LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           Q  L SW              +L+  Y+K    G + +  + F+++ D + ++W  +I G
Sbjct: 66  QPNLFSWN-------------NLLLAYSK---SGHLSEMERTFEKLPDRDGVTWNVLIEG 109

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           Y  S G    AVK ++ M++   +     T  ++LK   +    ++ +Q++   +K G  
Sbjct: 110 YSLS-GLVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFE 168

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT--------------------- 459
               VG+ L+ MY++ G + DA+K F  L ++N V YNT                     
Sbjct: 169 SYLLVGSPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGM 228

Query: 460 ---------MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
                    M+   A+N   ++A E   E++  G+    Y F S+L     +GAI  G Q
Sbjct: 229 EKDSVSWSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQ 288

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IHA II++  + +  + +ALI MY +C  +  A  VF  M+ +NV+SWT+M+ G+ + G 
Sbjct: 289 IHACIIRTNLQDHIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVVSWTAMVVGYGQTGR 348

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
           A  A++IF  M   GI P+  T    +SAC++   + EG   F       G++  +    
Sbjct: 349 AGEAVKIFLDMQRSGIDPDHYTLGQAISACANISSLEEG-SQFHGKAITAGLIHYITVSN 407

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
            +V L G+ G + ++      M +  D + W   + A
Sbjct: 408 SLVTLYGKCGDIDDSTRLFNEMNVR-DEVSWTAMVSA 443



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 60/283 (21%), Positives = 108/283 (38%), Gaps = 72/283 (25%)

Query: 511 IHARIIKSGF-ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           I+AR +  G  + N   +N L+  YS+  ++    + F+++ DR+ ++W  +I G++  G
Sbjct: 55  IYARRVFDGIPQPNLFSWNNLLLAYSKSGHLSEMERTFEKLPDRDGVTWNVLIEGYSLSG 114

Query: 570 FAARALEIFYKMLAD--------------------------------GIKPNGITYIAV- 596
               A++ +  M+ D                                 IK    +Y+ V 
Sbjct: 115 LVGAAVKAYNTMMKDFSSNLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVG 174

Query: 597 ---LSACSHAGLISEGWKHFRSMYDEHGIV---------------------QRMEH---- 628
              L   S  G IS+  K F  + D + ++                     + ME     
Sbjct: 175 SPLLDMYSKVGCISDAKKVFYGLDDRNTVMYNTLMGGLLACGMIEDALQLFRGMEKDSVS 234

Query: 629 YACMVDLLGRSGSLTEALEFIRSMP---LSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           ++ M+  L ++G   EA+E  R M    L  D   + + L AC   G    G+     I+
Sbjct: 235 WSAMIKGLAQNGMEKEAIECFREMKIEGLKMDQYPFGSVLPACGGLGAINDGRQIHACII 294

Query: 686 EQDPQDPAAHIL----LSNLYASAGHWEYVANIRKRMKERNLI 724
             + QD   HI     L ++Y       Y   +  RMK++N++
Sbjct: 295 RTNLQD---HIYVGSALIDMYCKCKCLHYAKTVFDRMKQKNVV 334


>gi|297814916|ref|XP_002875341.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297321179|gb|EFH51600.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 659

 Score =  470 bits (1209), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/633 (38%), Positives = 374/633 (59%), Gaps = 14/633 (2%)

Query: 239 VFDKMTEKNTV-GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F++  +K  V  W  +I    + G   +A+R F  M      P R +    + ACS L 
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SGKQ H  A   G   D+ V  +L+ MY+ C   G ++D+RKVFD +   N++SWT+
Sbjct: 91  DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC---GKLEDARKVFDEIPKRNIVSWTS 147

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF------ASVLKACGNLLDSNVAEQVY 411
           +I GY    G   +AV LF D++  +   +   F       SV+ AC  +    + E ++
Sbjct: 148 MIRGY-DLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIH 206

Query: 412 THAVKRGRALDDCVGNSLISMYARSGR--MEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +  +KRG      VGN+L+  YA+ G   +  ARK F+ + +K+ VSYN+++  YA++  
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266

Query: 470 SEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           S +AF++    I++  V  +  T +++L   S  GA+  G+ IH ++I+ G E +  +  
Sbjct: 267 SNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ++I MY +C  VE A   F  M+++NV SWT+MI G+  HG AA+ALE+F  M+  G++P
Sbjct: 327 SIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N IT+++VL+ACSHAGL   GW  F +M    G+   +EHY CMVDLLGR+G L +A + 
Sbjct: 387 NYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ M +  D ++W + L ACR+H + EL + +   + E DP +   ++LLS++YA +G W
Sbjct: 447 IQKMKMEPDSIIWSSLLAACRIHKNVELAEISVARLFELDPSNCGYYMLLSHIYADSGRW 506

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           + V  +R  MK R L+K  G S +E + +VH F +G+  HP+  +IY  L +L  K+ E 
Sbjct: 507 KDVERVRMTMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+ +T+ V H+++EE+K   L  HSEK+A+AFG+++T     + V KNLRVC DCH  I
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IS +  RE V+RD+ RFHH KDG CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGFCSCGDYW 659



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 225/443 (50%), Gaps = 13/443 (2%)

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F    +K D+ SW+S+I+     G   +A+  F  M +L   P    F   I+ACS+  
Sbjct: 31  LFNRYVDKTDVFSWNSVIADLARSGDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLL 90

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G   +      GY  SD+ V  ALI M+      LE A KVFD++ ++N V WT M
Sbjct: 91  DIFSGKQTHQQAFVFGY-QSDIFVSSALIVMYSTCG-KLEDARKVFDEIPKRNIVSWTSM 148

Query: 255 ITRCTQLGCPRDAIRLFLDMIL------SGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           I      G   DA+ LF D+++      +    D   +  V+SACS +      + +HS+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLIEENDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSF 208

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            I+ G    V VG +L+D YAK   +G V  +RK+FD+++D + +S+ +I++ Y QS G 
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGG-EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GM 266

Query: 369 DKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             EA  +F  +I+ +V   N  T ++VL A  +     + + ++   ++ G   D  VG 
Sbjct: 267 SNEAFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           S+I MY + GR+E AR AF+ +  KN+ S+  M+  Y  + ++ KA EL   + D+GV  
Sbjct: 327 SIIDMYCKCGRVETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 488 SAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           +  TF S+L+  S  G    G    +A   + G E     Y  ++ +  R   ++ A+ +
Sbjct: 387 NYITFVSVLAACSHAGLHDVGWHWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446

Query: 547 FKEME-DRNVISWTSMITGFAKH 568
            ++M+ + + I W+S++     H
Sbjct: 447 IQKMKMEPDSIIWSSLLAACRIH 469



 Score =  176 bits (446), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 149/509 (29%), Positives = 240/509 (47%), Gaps = 50/509 (9%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M +   +P   ++   +K+C    +   GK  H        + +  + 
Sbjct: 55  GDSAEALRAFSSMRKLSLYPTRSSFPCAIKACSSLLDIFSGKQTHQQAFVFGYQSDIFVS 114

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML---- 172
           ++LI +YS CG L +A K+F  +  KR+IVSW+SMI  Y   G  +DA+ +F ++L    
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEI-PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLIEEN 173

Query: 173 --ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
             +     +     +VI ACS      +   I+ F++K G FD  V VG  L+D + KG 
Sbjct: 174 DDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVIKRG-FDRGVSVGNTLLDAYAKGG 232

Query: 231 V-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSG 288
              +  A K+FD++ +K+ V +  +++   Q G   +A  +F  +I    +  +  TLS 
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFDVFRRLIKEKVVTFNCITLST 292

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+ A S       GK +H   IR GL  DV VG S++DMY KC   G V+ +R  FDRM 
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC---GRVETARLAFDRMK 349

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV SWTA+I GY   G   K A++LF  MI   V PN+ TF SVL AC          
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAK-ALELFPAMIDSGVRPNYITFVSVLAAC---------- 398

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
              +HA      L D   +   +M  R G             E  L  Y  MVD   +  
Sbjct: 399 ---SHA-----GLHDVGWHWFNAMKGRFG------------VEPGLEHYGCMVDLLGRAG 438

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             +KA++L+ +++   +   +  ++SLL+       +   E   AR+ +   + ++C Y 
Sbjct: 439 FLQKAYDLIQKMK---MEPDSIIWSSLLAACRIHKNVELAEISVARLFE--LDPSNCGYY 493

Query: 529 ALIS-MYSRCANVEAAFQVFKEMEDRNVI 556
            L+S +Y+     +   +V   M++R ++
Sbjct: 494 MLLSHIYADSGRWKDVERVRMTMKNRGLV 522



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 128/261 (49%), Gaps = 15/261 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPD----LDTYSLL--LKSCIRSRNFHLGKLVHSLLT 105
           Y LN   +       DL+ ++ N  D    LD+  ++  + +C R     L + +HS + 
Sbjct: 152 YDLNGNALDAVSLFKDLLIEE-NDDDATMFLDSMGMVSVISACSRVAAKGLTESIHSFVI 210

Query: 106 RSKLEPNSVILNSLISLYSKCGD--LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
           +   +    + N+L+  Y+K G+  +  A KIF  + +K D VS++S++S Y   G   +
Sbjct: 211 KRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNE 269

Query: 164 AIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           A  +F  ++ E     N    S V+ A S++  + IG  I+  +++ G  D DV VG ++
Sbjct: 270 AFDVFRRLIKEKVVTFNCITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED-DVIVGTSI 328

Query: 223 IDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           IDM+ K G V  E+A   FD+M  KN   WT MI      G    A+ LF  MI SG  P
Sbjct: 329 IDMYCKCGRV--ETARLAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386

Query: 282 DRFTLSGVVSACSELELFTSG 302
           +  T   V++ACS   L   G
Sbjct: 387 NYITFVSVLAACSHAGLHDVG 407


>gi|356536005|ref|XP_003536531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Glycine max]
          Length = 686

 Score =  469 bits (1208), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 254/649 (39%), Positives = 380/649 (58%), Gaps = 20/649 (3%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTV-GWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           L++M+ K  +DL ++ ++   +T   TV  WT +I+ C        A+  F +M     L
Sbjct: 49  LVNMYSK--LDLPNSAQLVLSLTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVL 106

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+ FT   V  A + L +  +GKQLH+ A++ G  LDV VGCS  DMY+K    G   ++
Sbjct: 107 PNDFTFPCVFKASASLHMPVTGKQLHALALKGGNILDVFVGCSAFDMYSK---TGLRPEA 163

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R +FD M   N+ +W A ++  VQ G R  +A+  F   +     PN  TF + L AC +
Sbjct: 164 RNMFDEMPHRNLATWNAYMSNAVQDG-RCLDAIAAFKKFLCVDGEPNAITFCAFLNACAD 222

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF--EKNLVSYN 458
           ++   +  Q++   V+     D  V N LI  Y + G +  +   F  +    +N+VS+ 
Sbjct: 223 IVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWC 282

Query: 459 TMVDAYAKNLNSEKA----FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +++ A  +N   E+A     +   E+E T      +  +S+LS  + +G +  G  +HA 
Sbjct: 283 SLLAALVQNHEEERACMVFLQARKEVEPTD-----FMISSVLSACAELGGLELGRSVHAL 337

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
            +K+  E N  + +AL+ +Y +C ++E A QVF+EM +RN+++W +MI G+A  G    A
Sbjct: 338 ALKACVEENIFVGSALVDLYGKCGSIEYAEQVFREMPERNLVTWNAMIGGYAHLGDVDMA 397

Query: 575 LEIFYKMLAD--GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           L +F +M +   GI  + +T ++VLSACS AG +  G + F SM   +GI    EHYAC+
Sbjct: 398 LSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPGAEHYACV 457

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           VDLLGRSG +  A EFI+ MP+   + VW   LGAC++HG T+LGK AAE + E DP D 
Sbjct: 458 VDLLGRSGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGKIAAEKLFELDPDDS 517

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
             H++ SN+ ASAG WE    +RK M++  + K  G SW+   N+VH F   ++ H K  
Sbjct: 518 GNHVVFSNMLASAGRWEEATIVRKEMRDIGIKKNVGYSWVAVKNRVHVFQAKDSFHEKNS 577

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           EI A L +L  ++K+ GY+PD N  L +LEEE+K   ++ HSEKIA+AFGLI+  +  PI
Sbjct: 578 EIQAMLAKLRGEMKKAGYVPDANLSLFDLEEEEKASEVWYHSEKIALAFGLITLPRGVPI 637

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R+ KNLR+C DCH+AIK+IS + GREI++RD+NRFH  KDG CSC DYW
Sbjct: 638 RITKNLRICIDCHSAIKFISKIVGREIIVRDNNRFHRFKDGWCSCKDYW 686



 Score =  205 bits (521), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 145/493 (29%), Positives = 241/493 (48%), Gaps = 15/493 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            L+S + SR+  LG+ VH+ + R+   P  S + N L+++YSK  DL  + ++  S+ N 
Sbjct: 13  FLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKL-DLPNSAQLVLSLTNP 71

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R +V+W+S+IS  V+  +   A+  F  M      PN++ F  V +A ++      G  +
Sbjct: 72  RTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVTGKQL 131

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +   LK G    DV VGC+  DM+ K  +  E A  +FD+M  +N   W   ++   Q G
Sbjct: 132 HALALKGGNI-LDVFVGCSAFDMYSKTGLRPE-ARNMFDEMPHRNLATWNAYMSNAVQDG 189

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              DAI  F   +     P+  T    ++AC+++     G+QLH + +R+    DV V  
Sbjct: 190 RCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELGRQLHGFIVRSRYREDVSVFN 249

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLD--HNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
            L+D Y KC   G +  S  VF R+     NV+SW +++   VQ+   ++E   +     
Sbjct: 250 GLIDFYGKC---GDIVSSELVFSRIGSGRRNVVSWCSLLAALVQN--HEEERACMVFLQA 304

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           + +V P  F  +SVL AC  L    +   V+  A+K     +  VG++L+ +Y + G +E
Sbjct: 305 RKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKCGSIE 364

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE--DTGVGTSAYTFASLLSG 498
            A + F  + E+NLV++N M+  YA   + + A  L  E+     G+  S  T  S+LS 
Sbjct: 365 YAEQVFREMPERNLVTWNAMIGGYAHLGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSA 424

Query: 499 ASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
            S  GA+ +G QI   +  + G E     Y  ++ +  R   V+ A++  K M     IS
Sbjct: 425 CSRAGAVERGLQIFESMRGRYGIEPGAEHYACVVDLLGRSGLVDRAYEFIKRMPILPTIS 484

Query: 558 -WTSMITGFAKHG 569
            W +++     HG
Sbjct: 485 VWGALLGACKMHG 497



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 105/400 (26%), Positives = 181/400 (45%), Gaps = 27/400 (6%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLIYH-LNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           S+  L P +   F   P  +    N  + + + DGR   AI            P+  T+ 
Sbjct: 155 SKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQDGRCLDAIAAFKKFLCVDGEPNAITFC 214

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN- 141
             L +C    +  LG+ +H  + RS+   +  + N LI  Y KCGD+  +  +F  +G+ 
Sbjct: 215 AFLNACADIVSLELGRQLHGFIVRSRYREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSG 274

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R++VSW S++++ V   ++  A  +F++  +    P ++  S+V+ AC+    + +G  
Sbjct: 275 RRNVVSWCSLLAALVQNHEEERACMVFLQARK-EVEPTDFMISSVLSACAELGGLELGRS 333

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++   LK    + ++ VG AL+D++ K GS+  E A +VF +M E+N V W  MI     
Sbjct: 334 VHALALK-ACVEENIFVGSALVDLYGKCGSI--EYAEQVFREMPERNLVTWNAMIGGYAH 390

Query: 261 LGCPRDAIRLFLDMILS--GFLPDRFTLSGVVSACSELELFTSGKQLHS-----WAIRTG 313
           LG    A+ LF +M     G      TL  V+SACS       G Q+       + I  G
Sbjct: 391 LGDVDMALSLFQEMTSGSCGIALSYVTLVSVLSACSRAGAVERGLQIFESMRGRYGIEPG 450

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK--- 370
                CV    VD+  +    G VD + +   RM     +S    + G  +  G+ K   
Sbjct: 451 AEHYACV----VDLLGR---SGLVDRAYEFIKRMPILPTISVWGALLGACKMHGKTKLGK 503

Query: 371 -EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             A KLF   +    + NH  F+++L + G   ++ +  +
Sbjct: 504 IAAEKLFE--LDPDDSGNHVVFSNMLASAGRWEEATIVRK 541



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 82/379 (21%), Positives = 146/379 (38%), Gaps = 61/379 (16%)

Query: 400 NLLDSNVAEQVYTHAVKRGRA------------LDDCVGNSLISMYARSGRMEDARKAFE 447
           NLL S +   V + +   GRA            L   + N L++MY++      A+    
Sbjct: 8   NLLGSFLESAVLSRSSLLGRAVHAHILRTHDTPLPSFLCNHLVNMYSKLDLPNSAQLVLS 67

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
               + +V++ +++     N     A      +    V  + +TF  +   ++S+     
Sbjct: 68  LTNPRTVVTWTSLISGCVHNRRFTSALLHFSNMRRECVLPNDFTFPCVFKASASLHMPVT 127

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+Q+HA  +K G   +  +  +   MYS+      A  +F EM  RN+ +W + ++   +
Sbjct: 128 GKQLHALALKGGNILDVFVGCSAFDMYSKTGLRPEARNMFDEMPHRNLATWNAYMSNAVQ 187

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
            G    A+  F K L    +PN IT+ A L+AC+    +  G    R +   HG + R  
Sbjct: 188 DGRCLDAIAAFKKFLCVDGEPNAITFCAFLNACADIVSLELG----RQL---HGFIVRSR 240

Query: 628 H------YACMVDLLGRSGSLTEA-LEFIRSMPLSADVLVW------------------- 661
           +      +  ++D  G+ G +  + L F R      +V+ W                   
Sbjct: 241 YREDVSVFNGLIDFYGKCGDIVSSELVFSRIGSGRRNVVSWCSLLAALVQNHEEERACMV 300

Query: 662 ---------------RTFLGACRVHGDTELGKHAAEMILEQDPQDPA-AHILLSNLYASA 705
                           + L AC   G  ELG+    + L+   ++       L +LY   
Sbjct: 301 FLQARKEVEPTDFMISSVLSACAELGGLELGRSVHALALKACVEENIFVGSALVDLYGKC 360

Query: 706 GHWEYVANIRKRMKERNLI 724
           G  EY   + + M ERNL+
Sbjct: 361 GSIEYAEQVFREMPERNLV 379


>gi|224070863|ref|XP_002303270.1| predicted protein [Populus trichocarpa]
 gi|222840702|gb|EEE78249.1| predicted protein [Populus trichocarpa]
          Length = 805

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 276/816 (33%), Positives = 454/816 (55%), Gaps = 15/816 (1%)

Query: 47  SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           ++RL+     G +++A+  L  M +     + D +  L++ C   R +  G+ V   +  
Sbjct: 2   NSRLLQLCLSGNLEQALKHLASMQEVKIPVEEDCFVALIRLCENKRGYSEGEYVWKAVLS 61

Query: 107 SKLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           S +   SV L N+L+S++ + GD+  A  +F  MG +RD+ SW+ ++  Y   G   +A+
Sbjct: 62  SLVTLLSVRLGNALLSMFVRFGDVGNAWNVFGRMG-ERDLFSWNVLVGGYTKAGFFDEAL 120

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            ++  +L  G  P+ Y F +V+R+C+   ++  G  ++  +++   FD DV V  ALI M
Sbjct: 121 CLYHRILWAGIRPDVYTFPSVLRSCAGAMDLVRGREVHAHVVRFD-FDMDVDVVNALITM 179

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           +VK   D+ SA  +FDKM  ++ + W  MI+   +     + + LF  M      PD  T
Sbjct: 180 YVKCG-DVVSARMLFDKMPTRDRISWNAMISGYFENDECLEGLELFFRMRELSIDPDLMT 238

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           ++ V+SAC  L     G QLHS+ +RT    ++ V  SL+ MY      G   ++  VF 
Sbjct: 239 MTSVISACELLGDERLGTQLHSYVVRTAYDGNISVYNSLIQMYLSV---GHWKEAESVFS 295

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M   +V+SWT II+G V +   DK A++ +  M      P+  T ASVL AC +L   +
Sbjct: 296 GMECRDVVSWTTIISGCVDNLLPDK-ALETYKTMEITGTMPDEVTIASVLSACASLGQLD 354

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           +  +++  A + G  L   V NSLI MY++  R+E A + F  + +K+++S+ ++++   
Sbjct: 355 MGMKLHELAERTGHILYVVVANSLIDMYSKCKRIEKALEIFHQIPDKDVISWTSVINGLR 414

Query: 466 KNLNSEKAFELLHEIEDTGVGT--SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
            N    + FE L       + +  ++ T  S LS  + +GA+  G++IHA  +K+G   +
Sbjct: 415 IN---NRCFEALIFFRKMILKSKPNSVTLISALSACARVGALMCGKEIHAHALKAGMGFD 471

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
             + NA++ +Y RC  +  A   F  + +++V +W  ++TG+A+ G  A  +E+F +M+ 
Sbjct: 472 GFLPNAILDLYVRCGRMRTALNQFN-LNEKDVGAWNILLTGYAQKGKGAMVMELFKRMVE 530

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
             I P+ +T+I++L ACS +G+++EG ++F+ M   + I   ++HYAC+VDLLGR+G L 
Sbjct: 531 SEINPDDVTFISLLCACSRSGMVTEGLEYFQRMKVNYHITPNLKHYACVVDLLGRAGKLN 590

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           EA EFI  MP+  D  +W   L ACR+H    LG+ AA+ I +QD +    +ILL NLYA
Sbjct: 591 EAHEFIERMPIKPDPAIWGALLNACRIHRHVLLGELAAQHIFKQDAESIGYYILLCNLYA 650

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
            +G W+ VA +R+ MKE  LI + GCSW+E   KVH F  G+  HP+  EI   L+    
Sbjct: 651 DSGKWDEVAKVRRTMKEEGLIVDPGCSWVEVKGKVHAFLSGDNFHPQMQEINVVLEGFYE 710

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           K+K  G+       +  + +  K      HSE+ A+A+ LI+++   PI V KNL +C  
Sbjct: 711 KMKTSGFNGQECSSMDGI-QTSKADIFCGHSERQAIAYSLINSAPGMPIWVTKNLYMCQS 769

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           CH+ +K+IS +  REI +RD+ +FHH KDG CSC D
Sbjct: 770 CHSTVKFISKIVRREISVRDTEQFHHFKDGLCSCGD 805


>gi|356498444|ref|XP_003518062.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Glycine max]
          Length = 634

 Score =  469 bits (1207), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 235/593 (39%), Positives = 359/593 (60%), Gaps = 6/593 (1%)

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
            L M L G   +    + V++ C        G+++H+  I+T     V +   L+  Y K
Sbjct: 46  LLHMALRGLDTNFQDYNTVLNECLRKRAIREGQRVHAHMIKTHYLPCVYLRTRLIVFYVK 105

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C    S+ D+R VFD M + NV+SWTA+I+ Y Q G    +A+ LF  M++    PN FT
Sbjct: 106 CD---SLRDARHVFDVMPERNVVSWTAMISAYSQRG-YASQALSLFVQMLRSGTEPNEFT 161

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FA+VL +C       +  Q+++H +K        VG+SL+ MYA+ G++ +AR  F+ L 
Sbjct: 162 FATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAKDGKIHEARGIFQCLP 221

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E+++VS   ++  YA+    E+A EL   ++  G+ ++  T+ S+L+  S + A+  G+Q
Sbjct: 222 ERDVVSCTAIISGYAQLGLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAALDHGKQ 281

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H  +++S   S   + N+LI MYS+C N+  A ++F  + +R VISW +M+ G++KHG 
Sbjct: 282 VHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGYSKHGE 341

Query: 571 AARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ-RMEH 628
               LE+F  M+ +  +KP+ +T +AVLS CSH GL  +G   F  M      VQ   +H
Sbjct: 342 GREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQPDSKH 401

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y C+VD+LGR+G +  A EF++ MP      +W   LGAC VH + ++G+     +L+ +
Sbjct: 402 YGCVVDMLGRAGRVEAAFEFVKKMPFEPSAAIWGCLLGACSVHSNLDIGEFVGHQLLQIE 461

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P++   +++LSNLYASAG WE V ++R  M ++ + KE G SWIE D  +H FH  + SH
Sbjct: 462 PENAGNYVILSNLYASAGRWEDVRSLRNLMLKKAVTKEPGRSWIELDQVLHTFHASDCSH 521

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
           P+  E+ A++ +L+ + KE GY+PD + VLH+++EEQK + L  HSEK+A+ FGLI+T +
Sbjct: 522 PRREEVSAKVQELSARFKEAGYVPDLSCVLHDVDEEQKEKILLSHSEKLALTFGLIATPE 581

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S PIRV KNLR+C DCH   KY S + GRE+ LRD NRFH I  GKCSC DYW
Sbjct: 582 SVPIRVIKNLRICVDCHNFAKYTSKIYGREVSLRDKNRFHRIVGGKCSCGDYW 634



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/406 (30%), Positives = 216/406 (53%), Gaps = 16/406 (3%)

Query: 40  PTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKL 99
           P+ S  + N    H++D R+++A+  + L   +G   +   Y+ +L  C+R R    G+ 
Sbjct: 26  PSNSHHVLN---IHIHDTRLREALLHMAL---RGLDTNFQDYNTVLNECLRKRAIREGQR 79

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           VH+ + ++   P   +   LI  Y KC  L +A  +F  M  +R++VSW++MIS+Y  RG
Sbjct: 80  VHAHMIKTHYLPCVYLRTRLIVFYVKCDSLRDARHVFDVM-PERNVVSWTAMISAYSQRG 138

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
               A+ +FV+ML  G  PNE+ F+ V+ +C  +    +G  I+  ++K  Y ++ V VG
Sbjct: 139 YASQALSLFVQMLRSGTEPNEFTFATVLTSCIGSSGFVLGRQIHSHIIKLNY-EAHVYVG 197

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            +L+DM+ K    +  A  +F  + E++ V  T +I+   QLG   +A+ LF  +   G 
Sbjct: 198 SSLLDMYAKDG-KIHEARGIFQCLPERDVVSCTAIISGYAQLGLDEEALELFRRLQREGM 256

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
             +  T + V++A S L     GKQ+H+  +R+ +   V +  SL+DMY+KC   G++  
Sbjct: 257 QSNYVTYTSVLTALSGLAALDHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKC---GNLTY 313

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKAC 398
           +R++FD + +  V+SW A++ GY +  G  +E ++LF+ MI + +V P+  T  +VL  C
Sbjct: 314 ARRIFDTLHERTVISWNAMLVGYSKH-GEGREVLELFNLMIDENKVKPDSVTVLAVLSGC 372

Query: 399 --GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
             G L D  +       + K     D      ++ M  R+GR+E A
Sbjct: 373 SHGGLEDKGMDIFYDMTSGKISVQPDSKHYGCVVDMLGRAGRVEAA 418



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 126/389 (32%), Positives = 204/389 (52%), Gaps = 13/389 (3%)

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           +HM +  L+  F      ++ V+  C     +  G  ++  ++K  Y    V +   LI 
Sbjct: 47  LHMALRGLDTNFQD----YNTVLNECLRKRAIREGQRVHAHMIKTHYLPC-VYLRTRLIV 101

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            +VK    L  A  VFD M E+N V WT MI+  +Q G    A+ LF+ M+ SG  P+ F
Sbjct: 102 FYVKCD-SLRDARHVFDVMPERNVVSWTAMISAYSQRGYASQALSLFVQMLRSGTEPNEF 160

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T + V+++C     F  G+Q+HS  I+      V VG SL+DMYAK   DG + ++R +F
Sbjct: 161 TFATVLTSCIGSSGFVLGRQIHSHIIKLNYEAHVYVGSSLLDMYAK---DGKIHEARGIF 217

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
             + + +V+S TAII+GY Q  G D+EA++LF  + +  +  N+ T+ SVL A   L   
Sbjct: 218 QCLPERDVVSCTAIISGYAQL-GLDEEALELFRRLQREGMQSNYVTYTSVLTALSGLAAL 276

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
           +  +QV+ H ++        + NSLI MY++ G +  AR+ F++L E+ ++S+N M+  Y
Sbjct: 277 DHGKQVHNHLLRSEVPSYVVLQNSLIDMYSKCGNLTYARRIFDTLHERTVISWNAMLVGY 336

Query: 465 AKNLNSEKAFELLH-EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII--KSGFE 521
           +K+    +  EL +  I++  V   + T  ++LSG S  G   KG  I   +   K   +
Sbjct: 337 SKHGEGREVLELFNLMIDENKVKPDSVTVLAVLSGCSHGGLEDKGMDIFYDMTSGKISVQ 396

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEM 550
            +   Y  ++ M  R   VEAAF+  K+M
Sbjct: 397 PDSKHYGCVVDMLGRAGRVEAAFEFVKKM 425


>gi|225441064|ref|XP_002277923.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g03800-like [Vitis vinifera]
          Length = 882

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 271/814 (33%), Positives = 444/814 (54%), Gaps = 45/814 (5%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL   +R  +  L K VH+ +   KL  +  + N+LI  Y K G +  A K+F  +    
Sbjct: 78  LLDLSVRYDDVELIKAVHASIF--KLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCP- 134

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           ++VS+++MIS +    ++  A+ +F  M   G   NE+ F A++  C    ++ +G  ++
Sbjct: 135 NVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLH 194

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             ++K G+ +    V  AL+ ++ K    L+S  ++FD+M  ++   W  +I+   +   
Sbjct: 195 AIVIKMGFLNYTF-VSNALMGLYGKCGY-LDSVLQLFDEMPHRDIASWNTVISSVVKEMM 252

Query: 264 PRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              A  LF DM  + GF  D FTLS ++ A   L     G+++H+  I+ G   ++ V  
Sbjct: 253 YERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVIN 311

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---------------- 366
           +L+  Y KC   GS+     +F++M   +V++WT +IT Y++ G                
Sbjct: 312 ALIRFYTKC---GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARN 368

Query: 367 --------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
                         G   +A+  F  M++  V    FT   VL ACG L+++ +++Q++ 
Sbjct: 369 SISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHG 428

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARK--AFESLFEKNLVSYNTMVDAYAKNLNS 470
             +K G   + C+  +L+ M  R GRM DA+K  +  S  +   + + +M+  YA+N   
Sbjct: 429 FILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQP 488

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK-GEQIHARIIKSGFESNHCIYNA 529
           E+A  L  + +  G        ++ + G     A  + G+QIH   +KSGF S+  + N+
Sbjct: 489 EEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNS 548

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           +I+MYS+C+N++ A +VF  M   +++SW  +I G   H     AL ++ KM   GIKP+
Sbjct: 549 IITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPD 608

Query: 590 GITYIAVLSACSH--AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            +T++ ++SA  H  + L+    + F SM   + I   +EHY  +V +LG  G L EA E
Sbjct: 609 TVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEE 668

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I  MP+  +  VWR  L ACR+H +T +GK AA+ +L   P DP+ +IL+SNLY++ G 
Sbjct: 669 MINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGR 728

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W     +R+ M+ +   K  G SWI  +NKVH F+  + SHP+  +I++ L+ L ++  +
Sbjct: 729 WHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLK 788

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY+PDT+FVLHE+EE QK  +LF HS KIA  +GL+ T   +PIR+ KN+ +CGDCHT 
Sbjct: 789 AGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTF 848

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +KY+S+VTGREI LRD++  H   +G+CSC DYW
Sbjct: 849 LKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 882



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   KA+     M ++G      T + +L +C       + K +H  + +     N+ 
Sbjct: 381 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 440

Query: 115 ILNSLISLYSKCGDLNEANKI-FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE-ML 172
           I  +L+ + ++CG + +A K+  +   ++   + W+SMI  Y    +  +AI +F +  L
Sbjct: 441 IEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQL 500

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           E     ++   +AV+  C       +G  I+   LK G+  SD+ VG ++I M+ K S +
Sbjct: 501 EGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFL-SDLGVGNSIITMYSKCS-N 558

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A KVF+ M   + V W  +I          +A+ ++  M  +G  PD  T   ++SA
Sbjct: 559 MDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 618


>gi|357502643|ref|XP_003621610.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496625|gb|AES77828.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 881

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 252/736 (34%), Positives = 420/736 (57%), Gaps = 12/736 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +G  +K+I     M       D  T++++LK+C    ++ LG  VH L  +   + +
Sbjct: 145 YLQNGFHRKSIEIFTKMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMGFDSD 204

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V   +L+ +YS C  L+ A  IF  M  +R+ V WS++I+ YV   +  + + ++  ML
Sbjct: 205 VVTGTALVDMYSTCKKLDHAFNIFCEMP-ERNSVCWSAVIAGYVRNDRFTEGLKLYKVML 263

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS-- 230
           + G   ++  F++  R+C+      +G  ++ + LK   F  D  VG A +DM+ K    
Sbjct: 264 DEGMGVSQATFASAFRSCAGLSAFELGTQLHAYALKTN-FGYDNIVGTATLDMYAKCDRM 322

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           VD    +  F   T ++     +   R  Q+    +A+ +F  +  S    D  +LSG +
Sbjct: 323 VDARKVFNTFPNPTRQSHNALIVGYARQDQV---LEALEIFRSLQKSYLDFDEISLSGAL 379

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +ACS ++ +  G QLH  A++ GL  ++CV  +++DMYAKC   G++ ++  +FD M   
Sbjct: 380 TACSAIKGYLEGIQLHGLAVKCGLDFNICVANTILDMYAKC---GALMEACLIFDDMEIK 436

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + +SW AII  + Q+    +E + LF  M++  + P+ +TF SV+KAC      N   +V
Sbjct: 437 DAVSWNAIIAAHEQNE-HVEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEV 495

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   +K G  LD  VG+++I MY + G + +A K  E L E+  VS+N+++  ++     
Sbjct: 496 HGRVIKSGMGLDWFVGSAIIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQG 555

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E A      +   GV    +T+A++L   +++  +  G+QIH +I+K    S+  I + +
Sbjct: 556 ENALSYFSRMLQVGVIPDNFTYATVLDICANLATVELGKQIHGQILKLQLHSDVYIASTI 615

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MYS+C N++ +  +F++   R+ ++W++MI  +A HG    A+++F +M    +KPN 
Sbjct: 616 VDMYSKCGNMQDSRIMFEKAPKRDYVTWSAMICAYAYHGLGEDAIKLFEEMQLQNVKPNH 675

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
             +I+VL AC+H G + +G  +FR M   +G+  +MEHY+CMVDLLGRSG + EALE I 
Sbjct: 676 TIFISVLRACAHMGFVDKGLHYFREMRSHYGLDPQMEHYSCMVDLLGRSGQVNEALELIE 735

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           SMP  AD ++WRT LG CR+ G+ E+ + AA  +L+ DPQD +A++LLSN+YA AG W  
Sbjct: 736 SMPFEADDVIWRTLLGICRLQGNVEVAEKAANSLLQLDPQDSSAYVLLSNVYAIAGMWGE 795

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           VA IR  MK   L KE GCSWI+  ++VH F VG+ +HP++ EIY +   L  ++K  GY
Sbjct: 796 VAKIRSFMKNYKLKKEPGCSWIQVRDEVHAFLVGDKAHPRSEEIYQQTHLLVDEMKWDGY 855

Query: 771 LPDTN-FVLHELEEEQ 785
           +P+ + F+L E  +EQ
Sbjct: 856 VPEIDGFLLDEEVDEQ 871



 Score =  271 bits (694), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 181/664 (27%), Positives = 326/664 (49%), Gaps = 55/664 (8%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S + + C   +  + GK  H+ +T +   P   + N L+  Y KC +LN A  +F  M
Sbjct: 40  TFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNVFDKM 99

Query: 140 ------------------GN------------KRDIVSWSSMISSYVNRGKQVDAIHMFV 169
                             GN            +RD+VSW+SM+S Y+  G    +I +F 
Sbjct: 100 PQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSIEIFT 159

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M  L    +   F+ V++AC+  E+  +G  ++   ++ G FDSDV  G AL+DM+   
Sbjct: 160 KMRLLEIQHDYATFAVVLKACTGIEDYGLGLQVHCLAIQMG-FDSDVVTGTALVDMY-ST 217

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              L+ A+ +F +M E+N+V W+ +I    +     + ++L+  M+  G    + T +  
Sbjct: 218 CKKLDHAFNIFCEMPERNSVCWSAVIAGYVRNDRFTEGLKLYKVMLDEGMGVSQATFASA 277

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
             +C+ L  F  G QLH++A++T    D  VG + +DMYAKC     + D+RKVF+   +
Sbjct: 278 FRSCAGLSAFELGTQLHAYALKTNFGYDNIVGTATLDMYAKCD---RMVDARKVFNTFPN 334

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
               S  A+I GY +   +  EA+++F  + +  +  +  + +  L AC  +       Q
Sbjct: 335 PTRQSHNALIVGYARQ-DQVLEALEIFRSLQKSYLDFDEISLSGALTACSAIKGYLEGIQ 393

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++  AVK G   + CV N+++ MYA+ G + +A   F+ +  K+ VS+N ++ A+ +N +
Sbjct: 394 LHGLAVKCGLDFNICVANTILDMYAKCGALMEACLIFDDMEIKDAVSWNAIIAAHEQNEH 453

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E+   L   +  + +    YTF S++   +   A+  G ++H R+IKSG   +  + +A
Sbjct: 454 VEETLALFVSMLRSTMEPDDYTFGSVVKACAGKKALNYGMEVHGRVIKSGMGLDWFVGSA 513

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           +I MY +C  +  A ++ + +E+R  +SW S+I+GF+       AL  F +ML  G+ P+
Sbjct: 514 IIDMYCKCGMLVEAEKIHERLEERTTVSWNSIISGFSSEKQGENALSYFSRMLQVGVIPD 573

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY------ACMVDLLGRSGSLT 643
             TY  VL  C++   +  G +        HG + +++ +      + +VD+  + G++ 
Sbjct: 574 NFTYATVLDICANLATVELGKQ-------IHGQILKLQLHSDVYIASTIVDMYSKCGNMQ 626

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD--PAAHILLSNL 701
           ++       P   D + W   + A   HG   LG+ A ++  E   Q+  P   I +S L
Sbjct: 627 DSRIMFEKAP-KRDYVTWSAMICAYAYHG---LGEDAIKLFEEMQLQNVKPNHTIFISVL 682

Query: 702 YASA 705
            A A
Sbjct: 683 RACA 686



 Score = 76.6 bits (187), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 45/146 (30%), Positives = 69/146 (47%), Gaps = 31/146 (21%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T   TF+ +    S++ AI  G+Q HA+I  +GF     + N L+  Y +C N+  AF V
Sbjct: 36  TKKLTFSHIFQKCSNLKAINPGKQAHAQITVTGFVPTVFVSNCLLQFYCKCLNLNYAFNV 95

Query: 547 FKEMEDRNVISWTSMITGFA-------------------------------KHGFAARAL 575
           F +M  R+VISW +MI G+A                               ++GF  +++
Sbjct: 96  FDKMPQRDVISWNTMIFGYAGVGNMEFAQFLFDSMPERDVVSWNSMLSCYLQNGFHRKSI 155

Query: 576 EIFYKMLADGIKPNGITYIAVLSACS 601
           EIF KM    I+ +  T+  VL AC+
Sbjct: 156 EIFTKMRLLEIQHDYATFAVVLKACT 181


>gi|347954536|gb|AEP33768.1| organelle transcript processing 82, partial [Nasturtium officinale]
          Length = 670

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 250/662 (37%), Positives = 381/662 (57%), Gaps = 37/662 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF+ + E N + W  M         P  A++L++ MI  G LP+ +T   ++ +
Sbjct: 13  LPYAISVFETIQEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLKS 72

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR------ 346
           C++L+    G Q+H   ++ G  LD+ V  SL+ MY +   +  ++D+ KVFDR      
Sbjct: 73  CAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQ---NERLEDAHKVFDRSSHRDV 129

Query: 347 ---------------------MLDH----NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
                                M D     +V+SW A+I+GYV++G   KEA++LF +M++
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNY-KEALELFKEMMK 188

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V P+  T  +V+ A        +  QV++     G   +  + N+LI  Y++ G ME 
Sbjct: 189 TNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKCGEMET 248

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   F  L  K+++S+N ++  Y      ++A  L  E+  +G   +  T  S+L   + 
Sbjct: 249 ACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSGESPNDVTMLSILHACAH 308

Query: 502 IGAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +GAI  G  IH  I K   G  +   +  +LI MYS+C ++EAA QVF  M  +++ +W 
Sbjct: 309 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLPAWN 368

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI GFA HG A  A +IF +M  + IKP+ IT++ +LSACSHAG++  G   FRSM   
Sbjct: 369 AMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRHIFRSMTHN 428

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           + I  ++EHY CM+DLLG SG   EA E I +M +  D ++W + L AC++HG+ ELG+ 
Sbjct: 429 YKITPKLEHYGCMIDLLGHSGLFKEAEEMISTMTMEPDGVIWCSLLKACKMHGNVELGEK 488

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
            A+ + + +P +P +++LLSN+YA+AG W  VA IR  + ++ + K  GCS IE D+ VH
Sbjct: 489 FAQNLFKIEPNNPGSYVLLSNIYATAGRWNEVARIRGLLNDKGMKKVPGCSSIEIDSVVH 548

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F +G+  HP+  EIY  L+++ + ++E G++PDT+ VL E+EEE K   L  HSEK+A+
Sbjct: 549 EFIIGDKFHPRNREIYGMLEEMEVLLQEAGFVPDTSEVLQEMEEEFKEGALRHHSEKLAI 608

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLIST     + + KNLRVC +CH A K IS +  REI+ RD  RFHH +DG CSCND
Sbjct: 609 AFGLISTKPETKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCND 668

Query: 860 YW 861
           YW
Sbjct: 669 YW 670



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 239/522 (45%), Gaps = 73/522 (13%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A  +F+++  + +++ W++M   +      V A+ ++V M+ LG  PN Y F  +++
Sbjct: 13  LPYAISVFETI-QEPNLLIWNTMFRGHALSPDPVSALKLYVCMISLGLLPNSYTFPFLLK 71

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE--- 245
           +C+  +    G  I+G +LK GY + D+ V  +LI M+V+    LE A+KVFD+ +    
Sbjct: 72  SCAKLKASKEGLQIHGHVLKLGY-ELDLYVHTSLISMYVQNE-RLEDAHKVFDRSSHRDV 129

Query: 246 ----------------------------KNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
                                       K+ V W  MI+   + G  ++A+ LF +M+ +
Sbjct: 130 VSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVETGNYKEALELFKEMMKT 189

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
              PD  T+  V+SA +       G+Q+HSW    G   ++ +  +L+D Y+KC   G +
Sbjct: 190 NVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSNLKIVNALIDFYSKC---GEM 246

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           + +  +F  +   +V+SW  +I GY       KEA+ LF +M++   +PN  T  S+L A
Sbjct: 247 ETACGLFLGLSYKDVISWNILIGGYTHL-NLYKEALLLFQEMLRSGESPNDVTMLSILHA 305

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           C +L   ++   ++ +  KR + + +   +  SLI MY++ G +E A + F S+  K+L 
Sbjct: 306 CAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCGDIEAAHQVFNSMLHKSLP 365

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           ++N M+  +A +  +  AF++   +    +     TF  LLS  S  G +  G       
Sbjct: 366 AWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLSACSHAGMLDLGRH----- 420

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
                     I+ ++   Y     +E                +  MI      G    A 
Sbjct: 421 ----------IFRSMTHNYKITPKLE---------------HYGCMIDLLGHSGLFKEAE 455

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           E+   M    ++P+G+ + ++L AC   G +  G K  ++++
Sbjct: 456 EMISTMT---MEPDGVIWCSLLKACKMHGNVELGEKFAQNLF 494



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 222/458 (48%), Gaps = 47/458 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  LLKSC + +    G  +H  + +   E +  +  SLIS+Y +   
Sbjct: 54  MISLGLLPNSYTFPFLLKSCAKLKASKEGLQIHGHVLKLGYELDLYVHTSLISMYVQNER 113

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
           L +A+K+F    ++                              +D+VSW++MIS YV  
Sbjct: 114 LEDAHKVFDRSSHRDVVSYTALVTGYASRGYIESARNMFDEIPVKDVVSWNAMISGYVET 173

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G   +A+ +F EM++    P+E     VI A + + ++ +G  ++ ++   G F S++ +
Sbjct: 174 GNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHG-FGSNLKI 232

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             ALID + K   ++E+A  +F  ++ K+ + W ++I   T L   ++A+ LF +M+ SG
Sbjct: 233 VNALIDFYSKCG-EMETACGLFLGLSYKDVISWNILIGGYTHLNLYKEALLLFQEMLRSG 291

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTVDGS 336
             P+  T+  ++ AC+ L     G+ +H +  +   G+     +  SL+DMY+KC   G 
Sbjct: 292 ESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKC---GD 348

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           ++ + +VF+ ML  ++ +W A+I G+    GR   A  +FS M + ++ P+  TF  +L 
Sbjct: 349 IEAAHQVFNSMLHKSLPAWNAMIFGFAMH-GRANAAFDIFSRMRKNEIKPDDITFVGLLS 407

Query: 397 ACGNLLDSNVAEQVY---THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEK 452
           AC +    ++   ++   TH  K    L+      +I +   SG  ++A +   ++  E 
Sbjct: 408 ACSHAGMLDLGRHIFRSMTHNYKITPKLEHY--GCMIDLLGHSGLFKEAEEMISTMTMEP 465

Query: 453 NLVSYNTMVDAYAKNLN---SEKAFELLHEIEDTGVGT 487
           + V + +++ A   + N    EK  + L +IE    G+
Sbjct: 466 DGVIWCSLLKACKMHGNVELGEKFAQNLFKIEPNNPGS 503



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 126/254 (49%), Gaps = 3/254 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G  ++A+     M +    PD  T   ++ +  RS +  LG+ VHS +       N
Sbjct: 170 YVETGNYKEALELFKEMMKTNVRPDESTMVTVISASARSGSIELGRQVHSWIADHGFGSN 229

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+N+LI  YSKCG++  A  +F  +  K D++SW+ +I  Y +     +A+ +F EML
Sbjct: 230 LKIVNALIDFYSKCGEMETACGLFLGLSYK-DVISWNILIGGYTHLNLYKEALLLFQEML 288

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSV 231
             G  PN+    +++ AC++   + IG  I+ ++ K      +   +  +LIDM+ K   
Sbjct: 289 RSGESPNDVTMLSILHACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYSKCG- 347

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+E+A++VF+ M  K+   W  MI      G    A  +F  M  +   PD  T  G++S
Sbjct: 348 DIEAAHQVFNSMLHKSLPAWNAMIFGFAMHGRANAAFDIFSRMRKNEIKPDDITFVGLLS 407

Query: 292 ACSELELFTSGKQL 305
           ACS   +   G+ +
Sbjct: 408 ACSHAGMLDLGRHI 421


>gi|357167843|ref|XP_003581359.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like, partial [Brachypodium distachyon]
          Length = 745

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 231/617 (37%), Positives = 372/617 (60%), Gaps = 5/617 (0%)

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQ 304
           ++   + ++I    + G P DA+ LF++M+  +   PD+ T++  V +CS +   + G+ 
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           + ++A + G  +D  V  SL+ MYA C   G V  +  +F  +    V++W A+I GYV+
Sbjct: 193 VQAYAFKRGFMVDQFVLNSLIHMYASC---GDVVAAHVLFHTVQVKGVIAWNAMIAGYVK 249

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G   KE V++F  M++ +   +  T  SV  ACG L D+N+ + +  +A ++G      
Sbjct: 250 NGDW-KEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRN 308

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +  +L+ MYA+ G ++ AR+ F+ +  +++V+++ M+  Y ++    +A  + +E++ T 
Sbjct: 309 LATALVDMYAKCGELDKARRLFDRMHSRDVVAWSAMISGYTQSDRCREALAIFNEMQGTE 368

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V  +  T  S+LS  + +GA+  G+ +H+ I +        +  AL+  Y++C  ++ A 
Sbjct: 369 VNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKDAV 428

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           + F+ M  RN  +WT++I G A +G +  ALE+F  ML   I+P  +T+I VL ACSH  
Sbjct: 429 KAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSHGC 488

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+ EG +HF SM  ++GI  R+EHY CMVDLLGR+G + EA +FIR+MP+  + +VWR  
Sbjct: 489 LVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRAL 548

Query: 665 LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           L AC VH + E+G+ A + I+  DP     +ILLSN YAS G W+  A +RK MKE+ + 
Sbjct: 549 LSACTVHKNVEIGEEALKQIVPLDPCHSGNYILLSNTYASVGQWKNAAMVRKEMKEKGVE 608

Query: 725 KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           K  GCS IE +  + +F   ++ HP+  EIY ++ ++   IK  GY+P+T     +++E 
Sbjct: 609 KIPGCSLIELEGTIFEFFAEDSEHPQLTEIYEKVHEMIENIKMVGYIPNTADARLDVDEY 668

Query: 785 QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDS 844
           +K   +  HSEK+A+AFGL+ +     IR+ KNLRVC DCH+A K IS V  REI++RD 
Sbjct: 669 EKQVSVSHHSEKLAIAFGLMKSRPGATIRLSKNLRVCIDCHSATKLISKVYNREIIVRDR 728

Query: 845 NRFHHIKDGKCSCNDYW 861
           NRFHH KDG CSCNDYW
Sbjct: 729 NRFHHFKDGLCSCNDYW 745



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 125/420 (29%), Positives = 217/420 (51%), Gaps = 15/420 (3%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           ++++      PD  T +  +KSC R  +  +G+ V +   +     +  +LNSLI +Y+ 
Sbjct: 159 VEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRGVQAYAFKRGFMVDQFVLNSLIHMYAS 218

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CGD+  A+ +F ++  K  +++W++MI+ YV  G   + + MF  MLE+    +E    +
Sbjct: 219 CGDVVAAHVLFHTVQVK-GVIAWNAMIAGYVKNGDWKEVVEMFKGMLEVRAPFDEVTLLS 277

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V  AC    +  +G  I  +  + G   S   +  AL+DM+ K   +L+ A ++FD+M  
Sbjct: 278 VATACGRLGDANLGQWIAEYAEEKGMLRSR-NLATALVDMYAKCG-ELDKARRLFDRMHS 335

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++ V W+ MI+  TQ    R+A+ +F +M  +   P+  T+  V+SAC+ L    +GK +
Sbjct: 336 RDVVAWSAMISGYTQSDRCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWV 395

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           HS+  R  L L V +G +LVD YAKC   G + D+ K F+ M   N  +WTA+I G + S
Sbjct: 396 HSYIRRKDLPLTVILGTALVDFYAKC---GCIKDAVKAFESMPVRNTWTWTALIKG-MAS 451

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
            GR +EA++LFS M++  + P   TF  VL AC +     + E+   H     +    C 
Sbjct: 452 NGRSREALELFSSMLEANIEPTDVTFIGVLLACSH---GCLVEEGRRHFTSMTQDYGICP 508

Query: 426 G----NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  ++ +  R+G +++A +   ++  E N V +  ++ A   + N E   E L +I
Sbjct: 509 RIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWRALLSACTVHKNVEIGEEALKQI 568



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 118/429 (27%), Positives = 218/429 (50%), Gaps = 9/429 (2%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           R   S++ +I S++  G   DA+H+FVEML +    P+++  +  +++CS   ++++G  
Sbjct: 133 RSARSYNILIRSFLRAGHPEDALHLFVEMLDDTAVSPDQHTVANTVKSCSRMCDLSVGRG 192

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +  +  K G F  D  V  +LI M+     D+ +A+ +F  +  K  + W  MI    + 
Sbjct: 193 VQAYAFKRG-FMVDQFVLNSLIHMYASCG-DVVAAHVLFHTVQVKGVIAWNAMIAGYVKN 250

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G  ++ + +F  M+      D  TL  V +AC  L     G+ +  +A   G+     + 
Sbjct: 251 GDWKEVVEMFKGMLEVRAPFDEVTLLSVATACGRLGDANLGQWIAEYAEEKGMLRSRNLA 310

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +LVDMYAKC   G +D +R++FDRM   +V++W+A+I+GY QS  R +EA+ +F++M  
Sbjct: 311 TALVDMYAKC---GELDKARRLFDRMHSRDVVAWSAMISGYTQS-DRCREALAIFNEMQG 366

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
            +V PN  T  SVL AC  L      + V+++  ++   L   +G +L+  YA+ G ++D
Sbjct: 367 TEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGTALVDFYAKCGCIKD 426

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A KAFES+  +N  ++  ++   A N  S +A EL   + +  +  +  TF  +L   S 
Sbjct: 427 AVKAFESMPVRNTWTWTALIKGMASNGRSREALELFSSMLEANIEPTDVTFIGVLLACSH 486

Query: 502 IGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWT 559
              + +G +    + +  G       Y  ++ +  R   ++ A+Q  + M  + N + W 
Sbjct: 487 GCLVEEGRRHFTSMTQDYGICPRIEHYGCMVDLLGRAGLIDEAYQFIRNMPIEPNAVVWR 546

Query: 560 SMITGFAKH 568
           ++++    H
Sbjct: 547 ALLSACTVH 555



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 100/208 (48%), Gaps = 13/208 (6%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R ++A+   + M     +P+  T   +L +C        GK VHS + R  L    ++  
Sbjct: 353 RCREALAIFNEMQGTEVNPNDVTMVSVLSACAVLGALETGKWVHSYIRRKDLPLTVILGT 412

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +L+  Y+KCG + +A K F+SM   R+  +W+++I    + G+  +A+ +F  MLE    
Sbjct: 413 ALVDFYAKCGCIKDAVKAFESM-PVRNTWTWTALIKGMASNGRSREALELFSSMLEANIE 471

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC-----VGCALIDMFVKGSVD 232
           P +  F  V+ ACS+   V  G   +  + +    D  +C      GC ++D+  +  + 
Sbjct: 472 PTDVTFIGVLLACSHGCLVEEGRRHFTSMTQ----DYGICPRIEHYGC-MVDLLGRAGL- 525

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRCT 259
           ++ AY+    M  E N V W  +++ CT
Sbjct: 526 IDEAYQFIRNMPIEPNAVVWRALLSACT 553


>gi|224094835|ref|XP_002310258.1| predicted protein [Populus trichocarpa]
 gi|222853161|gb|EEE90708.1| predicted protein [Populus trichocarpa]
          Length = 666

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 246/680 (36%), Positives = 409/680 (60%), Gaps = 16/680 (2%)

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           ++  +++L +L+    K G LN A ++F  M  +RD +SW+++IS YVN     +A+ +F
Sbjct: 1   MQEINLVLKNLV----KTGHLNNARQLFDKM-LQRDEISWTTIISGYVNGMNTTEALSLF 55

Query: 169 VEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
            +M +E G   + +  S  ++AC    +V+ G  ++G+ +K  + +S V VG AL+DM++
Sbjct: 56  SKMWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNS-VFVGSALVDMYM 114

Query: 228 K-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
           K G VD      VF +M  +N V WT +I    + G  ++A+  F DM +     D +T 
Sbjct: 115 KIGKVD--EGCIVFKEMPLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTF 172

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           S  + AC++      G+++H   ++ G      V  +L  MY KC   G +D   ++F+ 
Sbjct: 173 SSALKACADSGALNYGREIHCQTLKKGFTAVSFVANTLATMYNKC---GKLDYGLRLFES 229

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   +V+SWT II   VQ G +++ AVK F  M +  V+PN FTFA+V+  C  L     
Sbjct: 230 MTQRDVVSWTTIIMSNVQIG-QEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEW 288

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            EQ++ H ++RG      V NS+++MY++  +++ A   F+ L  ++++S++TM+  YA+
Sbjct: 289 GEQLHAHVIRRGLVDSLSVANSIMAMYSKCWQLDLASTVFQGLSRRDIISWSTMISGYAQ 348

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
               E+AF+ L  +   G   + + FAS+LS   ++  + +G+Q+HA ++  G E N  +
Sbjct: 349 GGCGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMV 408

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            +ALI+MYS+C +++ A ++F E E  N++SWT+MI G+A+HG++  A+++F K+   G+
Sbjct: 409 QSALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGL 468

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ +T+IAVL+ACSHAGL+  G+ +F S+   H I    +HY CM+DLL R+G L +A 
Sbjct: 469 RPDSVTFIAVLAACSHAGLVDLGFHYFNSLSKVHQICPSKDHYGCMIDLLCRAGRLNDAE 528

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
             I+SMP   D +VW T L ACR+HGD + GK AAE IL+ DP     HI L+N+YA+ G
Sbjct: 529 SMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKILQLDPNCAVTHITLANMYAAKG 588

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W+  A +RK MK + ++KE G SWI+  ++V  F  G+ SHP+   IY  LD LA + +
Sbjct: 589 KWKEAAEVRKMMKSKGVVKEPGWSWIKFKDRVSAFVSGDRSHPEGEYIYDVLDLLASQAE 648

Query: 767 EFGYLPDTNFVLHELEEEQK 786
              ++ + +F+L+E++E Q+
Sbjct: 649 M--HMQEMDFLLNEVQESQR 666



 Score =  218 bits (556), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 159/569 (27%), Positives = 287/569 (50%), Gaps = 31/569 (5%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +  + G H D    SL LK+C  + +   G+ +H    ++    +  + ++L+ +Y K G
Sbjct: 58  MWVEPGLHMDPFILSLALKACGLNMSVSFGESLHGYSVKTDFVNSVFVGSALVDMYMKIG 117

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            ++E   +FK M   R++VSW+++I+  V  G   +A+  F +M       + Y FS+ +
Sbjct: 118 KVDEGCIVFKEM-PLRNVVSWTAIIAGLVRAGYNKEALAYFSDMWIQKVGCDTYTFSSAL 176

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           +AC+++  +  G  I+   LK G F +   V   L  M+ K    L+   ++F+ MT+++
Sbjct: 177 KACADSGALNYGREIHCQTLKKG-FTAVSFVANTLATMYNKCG-KLDYGLRLFESMTQRD 234

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V WT +I    Q+G   +A++ F  M  +   P+ FT + V+S C+ L     G+QLH+
Sbjct: 235 VVSWTTIIMSNVQIGQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHA 294

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             IR GL   + V  S++ MY+KC     +D +  VF  +   +++SW+ +I+GY Q GG
Sbjct: 295 HVIRRGLVDSLSVANSIMAMYSKCW---QLDLASTVFQGLSRRDIISWSTMISGYAQ-GG 350

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             +EA    S M +    PN F FASVL  CGN+      +Q++ H +  G   +  V +
Sbjct: 351 CGEEAFDYLSWMRREGPRPNEFAFASVLSVCGNMAILEQGKQLHAHVLCVGLEQNTMVQS 410

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +LI+MY++ G +++A K F+     N+VS+  M++ YA++  S++A +L  ++   G+  
Sbjct: 411 ALINMYSKCGSIKEASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRP 470

Query: 488 SAYTFASLLSGASSIGAIGKG-------EQIHARIIKSGFESNHCIYNALISMYSRCANV 540
            + TF ++L+  S  G +  G        ++H +I  S    +H  Y  +I +  R   +
Sbjct: 471 DSVTFIAVLAACSHAGLVDLGFHYFNSLSKVH-QICPS---KDH--YGCMIDLLCRAGRL 524

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPN-GITYIA 595
             A  + + M   R+ + W++++     HG      RA E   K+L   + PN  +T+I 
Sbjct: 525 NDAESMIQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAE---KILQ--LDPNCAVTHIT 579

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           + +  +  G   E     R M    G+V+
Sbjct: 580 LANMYAAKGKWKEA-AEVRKMMKSKGVVK 607



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 170/366 (46%), Gaps = 49/366 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ + A+     M +    P+  T++ ++  C        G+ +H+ + R  L  +  + 
Sbjct: 249 GQEENAVKAFRRMRETDVSPNEFTFAAVISGCATLGRIEWGEQLHAHVIRRGLVDSLSVA 308

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NS++++YSKC  L+ A+ +F+ + ++RDI+SWS+MIS Y   G   +A      M   G 
Sbjct: 309 NSIMAMYSKCWQLDLASTVFQGL-SRRDIISWSTMISGYAQGGCGEEAFDYLSWMRREGP 367

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PNE+ F++V+  C N   +  G  ++  +L C   + +  V  ALI+M+ K GS+  + 
Sbjct: 368 RPNEFAFASVLSVCGNMAILEQGKQLHAHVL-CVGLEQNTMVQSALINMYSKCGSI--KE 424

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A K+FD+    N V WT MI    + G  ++AI LF  +   G  PD  T   V++ACS 
Sbjct: 425 ASKIFDEAEYNNIVSWTAMINGYAEHGYSQEAIDLFKKLPKVGLRPDSVTFIAVLAACSH 484

Query: 296 LEL-------FTSGKQLHSWAIRTGLALDVC-----VGCSLVDMYAKCTVDGSVDDSRKV 343
             L       F S  ++H           +C      GC ++D+  +    G ++D+  +
Sbjct: 485 AGLVDLGFHYFNSLSKVH----------QICPSKDHYGC-MIDLLCRA---GRLNDAESM 530

Query: 344 FDRM-LDHNVMSWTAI-----ITGYVQSGGRDKEAVKLFSDMIQGQVAPN----HFTFAS 393
              M    + + W+ +     I G V  G R  E +         Q+ PN    H T A+
Sbjct: 531 IQSMPFQRDDVVWSTLLRACRIHGDVDCGKRAAEKIL--------QLDPNCAVTHITLAN 582

Query: 394 VLKACG 399
           +  A G
Sbjct: 583 MYAAKG 588


>gi|7523419|emb|CAB86438.1| putative protein [Arabidopsis thaliana]
          Length = 1017

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 255/757 (33%), Positives = 430/757 (56%), Gaps = 7/757 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G    A+     M  +G    L ++  LLK+C + R+   G  +HSLL +      
Sbjct: 120 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 179

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+N+L+S+Y+K  DL+ A ++F     K D V W+S++SSY   GK ++ + +F EM 
Sbjct: 180 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 239

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN Y   + + AC       +G  I+  +LK     S++ V  ALI M+ +    
Sbjct: 240 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG-K 298

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A ++  +M   + V W  +I    Q    ++A+  F DMI +G   D  +++ +++A
Sbjct: 299 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 358

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
              L    +G +LH++ I+ G   ++ VG +L+DMY+KC +   +    + F RM D ++
Sbjct: 359 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG---RAFLRMHDKDL 415

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT +I GY Q+     EA++LF D+ + ++  +     S+L+A   L    + ++++ 
Sbjct: 416 ISWTTVIAGYAQNDCH-VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 474

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +++G  LD  + N L+ +Y +   M  A + FES+  K++VS+ +M+ + A N N  +
Sbjct: 475 HILRKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 533

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A EL   + +TG+   +     +LS A+S+ A+ KG +IH  +++ GF     I  A++ 
Sbjct: 534 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 593

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY+ C ++++A  VF  +E + ++ +TSMI  +  HG    A+E+F KM  + + P+ I+
Sbjct: 594 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 653

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++A+L ACSHAGL+ EG    + M  E+ +    EHY C+VD+LGR+  + EA EF++ M
Sbjct: 654 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 713

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
                  VW   L ACR H + E+G+ AA+ +LE +P++P   +L+SN++A  G W  V 
Sbjct: 714 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 773

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGYL 771
            +R +MK   + K  GCSWIE D KVHKF   + SHP++ EIY +L ++  K+ +E GY+
Sbjct: 774 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYV 833

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
            DT FVLH ++E +KVQ L  HSE+IA+A+G    SK
Sbjct: 834 ADTKFVLHNVDEGEKVQMLHGHSERIAIAYGKERASK 870



 Score =  209 bits (533), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 252/465 (54%), Gaps = 10/465 (2%)

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           K+F  M + R   +W++MI +YV+ G+   A+ ++  M   G       F A+++AC+  
Sbjct: 100 KVFDEMPD-RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKL 158

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK-NTVGWT 252
            ++  G  ++  L+K GY  +   V  AL+ M+ K   DL +A ++FD   EK + V W 
Sbjct: 159 RDIRSGSELHSLLVKLGYHSTGFIVN-ALVSMYAKND-DLSAARRLFDGFQEKGDAVLWN 216

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +++  +  G   + + LF +M ++G  P+ +T+   ++AC        GK++H+  +++
Sbjct: 217 SILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKS 276

Query: 313 GL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
              + ++ V  +L+ MY +C   G +  + ++  +M + +V++W ++I GYVQ+    KE
Sbjct: 277 STHSSELYVCNALIAMYTRC---GKMPQAERILRQMNNADVVTWNSLIKGYVQN-LMYKE 332

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A++ FSDMI      +  +  S++ A G L +     +++ + +K G   +  VGN+LI 
Sbjct: 333 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 392

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY++        +AF  + +K+L+S+ T++  YA+N    +A EL  ++    +      
Sbjct: 393 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 452

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
             S+L  +S + ++   ++IH  I++ G   +  I N L+ +Y +C N+  A +VF+ ++
Sbjct: 453 LGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRVFESIK 511

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
            ++V+SWTSMI+  A +G  + A+E+F +M+  G+  + +  + +
Sbjct: 512 GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 556



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 119/463 (25%), Positives = 227/463 (49%), Gaps = 19/463 (4%)

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           S  KVFD+M ++    W  MI      G P  A+ L+ +M + G      +   ++ AC+
Sbjct: 97  SQEKVFDEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACA 156

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVM 353
           +L    SG +LHS  ++ G      +  +LV MYAK   +  +  +R++FD   +  + +
Sbjct: 157 KLRDIRSGSELHSLLVKLGYHSTGFIVNALVSMYAK---NDDLSAARRLFDGFQEKGDAV 213

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
            W +I++ Y  S G+  E ++LF +M     APN +T  S L AC     + + ++++  
Sbjct: 214 LWNSILSSYSTS-GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHAS 272

Query: 414 AVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            +K      +  V N+LI+MY R G+M  A +    +   ++V++N+++  Y +NL  ++
Sbjct: 273 VLKSSTHSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKE 332

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A E   ++   G  +   +  S+++ +  +  +  G ++HA +IK G++SN  + N LI 
Sbjct: 333 ALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLID 392

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MYS+C       + F  M D+++ISWT++I G+A++     ALE+F  +    ++ + + 
Sbjct: 393 MYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMI 452

Query: 593 YIAVLSACS---HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
             ++L A S      ++ E   H         ++Q       +VD+ G+  ++  A    
Sbjct: 453 LGSILRASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-----LVDVYGKCRNMGYATRVF 507

Query: 650 RSMPLSADVLVWRTFLGACRVHGD----TELGKHAAEMILEQD 688
            S+    DV+ W + + +  ++G+     EL +   E  L  D
Sbjct: 508 ESIK-GKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 549



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 70/270 (25%), Positives = 130/270 (48%), Gaps = 25/270 (9%)

Query: 410 VYTHAVKRGRALDDCVGNSLISMYAR------SGRMEDARKAFESLFEKNLVSYNTMVDA 463
           V T A +R   LD    NS +  +A         R     K F+ + ++   ++NTM+ A
Sbjct: 63  VLTEAFQR---LDVSENNSPVEAFAYVLELCGKRRAVSQEKVFDEMPDRTAFAWNTMIGA 119

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           Y  N     A  L   +   GV     +F +LL   + +  I  G ++H+ ++K G+ S 
Sbjct: 120 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 179

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKML 582
             I NAL+SMY++  ++ AA ++F   +++ + + W S+++ ++  G +   LE+F +M 
Sbjct: 180 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 239

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR-----MEHYAC--MVDL 635
             G  PN  T ++ L+AC       +G+ + +   + H  V +      E Y C  ++ +
Sbjct: 240 MTGPAPNSYTIVSALTAC-------DGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAM 292

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
             R G + +A   +R M  +ADV+ W + +
Sbjct: 293 YTRCGKMPQAERILRQMN-NADVVTWNSLI 321


>gi|242077758|ref|XP_002448815.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
 gi|241939998|gb|EES13143.1| hypothetical protein SORBIDRAFT_06g033730 [Sorghum bicolor]
          Length = 913

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 259/698 (37%), Positives = 395/698 (56%), Gaps = 29/698 (4%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           ++RA +   ++  G  ++G L K G F SD  +G  LIDM+ K   +L+ A +VF  M +
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLG-FGSDTMLGNNLIDMYAKCG-ELDMAGEVFGGMRD 280

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +N V WT ++    Q G     +RL  +M   S   P+ +TLS  + AC   E   +G  
Sbjct: 281 RNVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVG 340

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD-RMLDHNVMSWTAIITGYV 363
           +H   +RTG      V  SLV +Y+K    G + D+R+VFD   L   + +W A+I+GY 
Sbjct: 341 IHGLCVRTGYEEHYVVASSLVLLYSK---GGRIGDARRVFDCAGLGRGLATWNAMISGYA 397

Query: 364 QSG-GRDKEAVKLFSDMI------QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +G GRD  A+ +F +M       + Q  P+ FTFAS+LKACG L       QV+     
Sbjct: 398 HAGHGRD--ALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAA 455

Query: 417 RG--RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
            G   A +  +  +L+ MY + GR+  A + FE L  KN + + T+V  +A+     +A 
Sbjct: 456 SGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQVMEAL 515

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           EL      +G    A+  +S++   +    + +G Q+H   +KS   ++    N+++ MY
Sbjct: 516 ELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMY 575

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C   + A ++F+E+  RNV+SWT+MI G  KHG    A+ +F +M A G++P+ +TY+
Sbjct: 576 LKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYL 635

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           A+LSACSHAGL+ E  ++F  +  +  +  + EHYACMVDLLGR+G L EA + IR+MP+
Sbjct: 636 ALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPM 695

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
              V VW+T L ACRVH D  +G+ A +++L  D  +P  ++ LSN++A AG W     +
Sbjct: 696 EPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNPVNYVTLSNVFAEAGAWRECHKV 755

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVG--ETSHPKTLEIYAELDQLALKIKE-FGYL 771
           R  M+ R L K+ GCSW+E   +VH F+ G  E +HP+  +I   L  +  +++E  GY 
Sbjct: 756 RDAMRRRGLKKQGGCSWVEIGKEVHFFYGGGDEEAHPQAGDIRRVLRDVETRVREQLGYC 815

Query: 772 P-DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS-------KSKPIRVFKNLRVCGD 823
             D  F LH+++EE + + L  HSE++AV   L+            +PIRV+KNLRVCGD
Sbjct: 816 ADDVQFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGGGHRQPIRVYKNLRVCGD 875

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH   K +S V  R +V+RD+NRFH  + G CSC DYW
Sbjct: 876 CHEFFKGLSAVVRRALVVRDANRFHRFEHGTCSCKDYW 913



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 140/542 (25%), Positives = 256/542 (47%), Gaps = 30/542 (5%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL++  +  +   G  +H  LT+     ++++ N+LI +Y+KCG+L+ A ++F  M   R
Sbjct: 223 LLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKCGELDMAGEVFGGM-RDR 281

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHII 202
           ++VSW++++  ++  G     + +  EM       PNEY  SA ++AC  TE++  G  I
Sbjct: 282 NVVSWTALMVGFLQHGDATGCLRLLGEMRAASEAAPNEYTLSASLKACCVTEDMGAGVGI 341

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD-KMTEKNTVGWTLMITRCTQL 261
           +G  ++ GY +  V V  +L+ ++ KG   +  A +VFD     +    W  MI+     
Sbjct: 342 HGLCVRTGYEEHYV-VASSLVLLYSKGG-RIGDARRVFDCAGLGRGLATWNAMISGYAHA 399

Query: 262 GCPRDAIRLFLDMILSGFL------PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL- 314
           G  RDA+ +F +M            PD FT + ++ AC  L     G Q+H+    +G  
Sbjct: 400 GHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKACGGLGAPREGAQVHAAMAASGFS 459

Query: 315 -ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
            A +  +  +LVDMY KC   G +  + +VF+R+   N + WT ++ G+ Q  G+  EA+
Sbjct: 460 TASNAILAGALVDMYVKC---GRLPVAMQVFERLERKNAIQWTTVVVGHAQE-GQVMEAL 515

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
           +LF    +     +    +S++    +        QV+ + VK     D   GNS++ MY
Sbjct: 516 ELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGTDVSAGNSIVDMY 575

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            + G  ++A + F  +  +N+VS+ TM++   K+    +A  +  E+   GV     T+ 
Sbjct: 576 LKCGLPDEAERMFREIPARNVVSWTTMINGLGKHGLGREAVAMFEEMRAGGVEPDEVTYL 635

Query: 494 SLLSGASSIGAIGKGEQIHA-----RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
           +LLS  S  G + +  +  +     R ++   E     Y  ++ +  R   +  A  + +
Sbjct: 636 ALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEH----YACMVDLLGRAGELREARDLIR 691

Query: 549 EME-DRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAGLI 606
            M  +  V  W ++++    H   A   E    +LA DG  P  + Y+ + +  + AG  
Sbjct: 692 TMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAIDGDNP--VNYVTLSNVFAEAGAW 749

Query: 607 SE 608
            E
Sbjct: 750 RE 751



 Score =  183 bits (465), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 205/400 (51%), Gaps = 20/400 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T S  LK+C  + +   G  +H L  R+  E + V+ +SL+ LYSK G + +A ++
Sbjct: 317 PNEYTLSASLKACCVTEDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRV 376

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML------ELGFCPNEYCFSAVIRA 189
           F   G  R + +W++MIS Y + G   DA+ +F EM       E    P+E+ F+++++A
Sbjct: 377 FDCAGLGRGLATWNAMISGYAHAGHGRDALLVFREMRRRRRRHEDQHQPDEFTFASLLKA 436

Query: 190 CSNTENVAIGHIIYGFLLKCGYFD-SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           C        G  ++  +   G+   S+  +  AL+DM+VK    L  A +VF+++  KN 
Sbjct: 437 CGGLGAPREGAQVHAAMAASGFSTASNAILAGALVDMYVKCG-RLPVAMQVFERLERKNA 495

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           + WT ++    Q G   +A+ LF     SG   D   LS +V   ++  L   G+Q+H +
Sbjct: 496 IQWTTVVVGHAQEGQVMEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCY 555

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +++    DV  G S+VDMY KC   G  D++ ++F  +   NV+SWT +I G  +  G 
Sbjct: 556 GVKSPAGTDVSAGNSIVDMYLKC---GLPDEAERMFREIPARNVVSWTTMINGLGKH-GL 611

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVG 426
            +EAV +F +M  G V P+  T+ ++L AC    L+D     + Y   ++R R +     
Sbjct: 612 GREAVAMFEEMRAGGVEPDEVTYLALLSACSHAGLVDEC---RRYFSCIRRDRTVRPKAE 668

Query: 427 N--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           +   ++ +  R+G + +AR    ++  E  +  + T++ A
Sbjct: 669 HYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA 708



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 205/416 (49%), Gaps = 23/416 (5%)

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
           R  ++ ++ A ++      G QLH    + G   D  +G +L+DMYAKC   G +D + +
Sbjct: 217 RKMIADLLRASAKGSSLRGGVQLHGALTKLGFGSDTMLGNNLIDMYAKC---GELDMAGE 273

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNL 401
           VF  M D NV+SWTA++ G++Q G      ++L  +M    + APN +T ++ LKAC   
Sbjct: 274 VFGGMRDRNVVSWTALMVGFLQHGDATG-CLRLLGEMRAASEAAPNEYTLSASLKACCVT 332

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE-SLFEKNLVSYNTM 460
            D      ++   V+ G      V +SL+ +Y++ GR+ DAR+ F+ +   + L ++N M
Sbjct: 333 EDMGAGVGIHGLCVRTGYEEHYVVASSLVLLYSKGGRIGDARRVFDCAGLGRGLATWNAM 392

Query: 461 VDAYAKNLNSEKAFELLHEI-------EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +  YA   +   A  +  E+       ED       +TFASLL     +GA  +G Q+HA
Sbjct: 393 ISGYAHAGHGRDALLVFREMRRRRRRHEDQHQ-PDEFTFASLLKACGGLGAPREGAQVHA 451

Query: 514 RIIKSGFE--SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
            +  SGF   SN  +  AL+ MY +C  +  A QVF+ +E +N I WT+++ G A+ G  
Sbjct: 452 AMAASGFSTASNAILAGALVDMYVKCGRLPVAMQVFERLERKNAIQWTTVVVGHAQEGQV 511

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYA 630
             ALE+F +    G + +     +++   +   L+ +G + H   +    G    +    
Sbjct: 512 MEALELFRRFWRSGARADAHVLSSIVGVLADFALVEQGRQVHCYGVKSPAGT--DVSAGN 569

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
            +VD+  + G   EA    R +P + +V+ W T +     HG   LG+ A  M  E
Sbjct: 570 SIVDMYLKCGLPDEAERMFREIP-ARNVVSWTTMINGLGKHG---LGREAVAMFEE 621


>gi|242088929|ref|XP_002440297.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
 gi|241945582|gb|EES18727.1| hypothetical protein SORBIDRAFT_09g029295 [Sorghum bicolor]
          Length = 869

 Score =  469 bits (1206), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 283/805 (35%), Positives = 442/805 (54%), Gaps = 17/805 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G++ +A++   L+      PD D Y  L + C   R    G    +            + 
Sbjct: 76  GQLAQALW---LLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLG 132

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+++S+  + G+   A ++F  M  +RD+ SW+ M+  Y   G   +A+ ++  M+  G 
Sbjct: 133 NAMLSMLVRFGETWHAWRVFAKM-PERDVFSWNVMVGGYGKAGLLEEALDLYHRMMWAGV 191

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ Y F  V+R+C    +  +G  ++  +L+ G F  +V V  AL+ M+ K   D+ +A
Sbjct: 192 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG-FAEEVDVLNALMTMYAKCG-DVVAA 249

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            KVFD M   + + W  MI    + G     + LFL M+     P+  T++ V  A   L
Sbjct: 250 RKVFDSMAVMDCISWNAMIAGHFENGECNAGLELFLTMLQDEVQPNLMTITSVTVASGLL 309

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
              T  K++H  A++ G A DV    SL+ MYA     G +  +R VF RM   + MSWT
Sbjct: 310 SDITFAKEMHGLAVKRGFATDVAFCNSLIQMYASL---GMMGQARTVFSRMDTRDAMSWT 366

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I+GY ++G  DK A+++++ M    V+P+  T AS L AC  L   +V  +++  A  
Sbjct: 367 AMISGYEKNGFPDK-ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAES 425

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-LNSEKAFE 475
           +G      V N+L+ MYA+S R++ A + F+ + EK++VS+++M+  +  N  N E  + 
Sbjct: 426 KGFMSYVVVTNALLEMYAKSKRIDKAIEVFKCMPEKDVVSWSSMIAGFCFNHRNFEALYY 485

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
             H + D  V  ++ TF + L+  ++ GA+  G++IHA +++ G      + NALI +Y 
Sbjct: 486 FRHMLAD--VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIAYEGYLPNALIDLYV 543

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C     A+  F     ++V+SW  MI GF  HG    AL  F +M+  G  P+ +T++A
Sbjct: 544 KCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGNGETALSFFNQMVKIGECPDEVTFVA 603

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L ACS  G++SEGW+ F SM D++ IV  ++HYACMVDLL R G LTEA  FI  MP++
Sbjct: 604 LLCACSRGGMVSEGWELFHSMTDKYSIVPNLKHYACMVDLLSRVGQLTEAYNFINEMPIT 663

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            D  VW   L  CR+H   ELG+ AA+ +LE +P D   H+LL +LYA AG W+ +A +R
Sbjct: 664 PDAAVWGALLNGCRIHRHVELGELAAKYVLELEPNDAGYHVLLCDLYADAGIWDKLARVR 723

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K M+E+ L  ++GCSW+E    VH F   + SHP+  EI   L+ +  ++K  G  P  +
Sbjct: 724 KTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGCAPVES 783

Query: 776 FVLHELEEEQKVQYLF-QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
              H  E++     +F  HSE++AVAFGLI+T+    I V KN   C  CH  +K IS +
Sbjct: 784 ---HSPEDKVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISYI 840

Query: 835 TGREIVLRDSNRFHHIKDGKCSCND 859
             R+I++RDS + HH KDG CSC D
Sbjct: 841 VRRDIIVRDSKQVHHFKDGSCSCGD 865


>gi|225448223|ref|XP_002266190.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33990
           [Vitis vinifera]
          Length = 707

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 258/668 (38%), Positives = 388/668 (58%), Gaps = 22/668 (3%)

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK--------NTVGWTLMI 255
           GFLL   +F +       LI ++ K   DL SA  +FD             N+     M+
Sbjct: 52  GFLLHTPHFLA------RLIILYSKLG-DLHSARTLFDHRHHHHHGHTQAPNSFLCNTML 104

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
                 G   +AI L++ M   G   + FT   V+  C+       G+ +H   +RTG  
Sbjct: 105 RAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFG 164

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D+ V  +LVDMYAKC   G + D+ +VFDRML  +V+ WTA+IT Y Q+  R  +A+ L
Sbjct: 165 SDLFVEAALVDMYAKC---GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAE-RPLKALML 220

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  M +     +  T  SV  A G L D  +A  V+ +AV  G   D  VGNS++ MYA+
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNGFIGDVSVGNSIVGMYAK 280

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +E AR  F+ + E+N +S+N+M+  Y +N     A  L ++++ +    +  T   +
Sbjct: 281 CGNVERARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 340

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK--EMEDR 553
           +S  S +G+   G ++H  +I S  + +  + NA++ MY +C +++ A ++F   E+ +R
Sbjct: 341 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 400

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +V SW  +I+G+  HG    ALE+F +M  +G++PN IT+ ++LSACSHAGLI EG K F
Sbjct: 401 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 460

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M  +  +   M+HYACMVD+LGR+G L EA   I+ +P      VW   L ACR+HG+
Sbjct: 461 ADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 519

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
           TELG+ AA  + + +P+    ++L+SN+YA++  W+ V  +R+ MK R L K A  S IE
Sbjct: 520 TELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIE 579

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
              +VH FH  + S P   E+Y +++ LA+++K  GY+PD + VLH++E E K   L  H
Sbjct: 580 FGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYH 639

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+AVAFG++   +  PI+V KNLRVC DCH A K+IS + GR+I++RD NRFHH + G
Sbjct: 640 SEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGG 699

Query: 854 KCSCNDYW 861
           +CSC DYW
Sbjct: 700 RCSCGDYW 707



 Score =  230 bits (586), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 151/500 (30%), Positives = 254/500 (50%), Gaps = 20/500 (4%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLL-TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           Y  LL+ C         KL+HS L TR  L      L  LI LYSK GDL+ A  +F   
Sbjct: 28  YDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84

Query: 140 GNKRDIVSWS-------SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            +     + +       +M+ +Y N G+  +AI +++ M  +G   N + +  V++ C++
Sbjct: 85  HHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                 G +++G +++ G F SD+ V  AL+DM+ K   ++  A++VFD+M  ++ V WT
Sbjct: 145 ELGAVFGEVVHGQVVRTG-FGSDLFVEAALVDMYAKCG-EIGDAHEVFDRMLIRDVVCWT 202

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            MIT   Q   P  A+ LF  M   GFL D  T   V SA  +L        +H +A+  
Sbjct: 203 AMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQLGDGRMAISVHGYAVLN 262

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G   DV VG S+V MYAKC   G+V+ +R VFDRM + N +SW ++++GY Q+ GR  +A
Sbjct: 263 GFIGDVSVGNSIVGMYAKC---GNVERARLVFDRMEERNGISWNSMLSGYTQN-GRPTDA 318

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           + LF+ M   +  PN  T   ++ AC  L   ++  +++   +     +D  + N+++ M
Sbjct: 319 LSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDM 378

Query: 433 YARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           Y + G ++ A + F +  L E+++ S+N ++  Y  + + ++A EL   ++  GV  +  
Sbjct: 379 YMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDI 438

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           TF S+LS  S  G I +G +  A + K         Y  ++ M  R   +  AF++ K++
Sbjct: 439 TFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKI 498

Query: 551 EDRNVIS-WTSMITGFAKHG 569
             R     W +++     HG
Sbjct: 499 PSRPSDEVWGALLLACRIHG 518



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 153/566 (27%), Positives = 256/566 (45%), Gaps = 67/566 (11%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N GR  +AI     M + G   +  TY  +LK C        G++VH  + R+    +  
Sbjct: 109 NAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLF 168

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +L+ +Y+KCG++ +A+++F  M   RD+V W++MI+ Y    + + A+ +F +M E 
Sbjct: 169 VEAALVDMYAKCGEIGDAHEVFDRM-LIRDVVCWTAMITLYEQAERPLKALMLFRKMQEE 227

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           GF  +E    +V  A     +  +   ++G+ +  G F  DV VG +++ M+ K   ++E
Sbjct: 228 GFLGDEITAISVASAVGQLGDGRMAISVHGYAVLNG-FIGDVSVGNSIVGMYAKCG-NVE 285

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  VFD+M E+N + W  M++  TQ G P DA+ LF  M  S   P+  T   +VSACS
Sbjct: 286 RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 345

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLDHNV 352
            L     G++LH++ I + + +D  +  +++DMY KC   G +D + ++F+   + + +V
Sbjct: 346 YLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC---GDLDTAVEMFNNCELGERDV 402

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            SW  +I+GY    G  KEA++LFS M    V PN  TF S+L AC             +
Sbjct: 403 SSWNVLISGY-GVHGHGKEALELFSRMQVEGVEPNDITFTSILSAC-------------S 448

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL----FEKNLVSYNTMVDAYAKNL 468
           HA                      G +++ RK F  +        +  Y  MVD   +  
Sbjct: 449 HA----------------------GLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAG 486

Query: 469 NSEKAFELLHEIEDTGVGT--SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
              +AF L+ +I          A   A  + G + +G I               E  H  
Sbjct: 487 FLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQ-------LEPEHTG 539

Query: 527 YNALISMYSRCAN----VEAAFQVFKEMEDRNVISWTSMITGFAKHGF------AARALE 576
           Y  L+S     +N    VE   Q  K    +   +++ +  G   HGF      +    E
Sbjct: 540 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 599

Query: 577 IFYKMLADGIKPNGITYIAVLSACSH 602
           ++ K+ +  I+   + Y+  LS   H
Sbjct: 600 VYRKVESLAIEMKMVGYVPDLSCVLH 625



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 9/217 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR   A+   + M      P+  T  +++ +C    + HLG+ +H+ +  SK++ +
Sbjct: 309 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 368

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           + + N+++ +Y KCGDL+ A ++F +    +RD+ SW+ +IS Y   G   +A+ +F  M
Sbjct: 369 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 428

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  PN+  F++++ ACS+   +  G   +  + K           C ++DM  +   
Sbjct: 429 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYAC-MVDMLGRAGF 487

Query: 232 DLESAYKVFDKMTEKNTVG-WTLMITRC-----TQLG 262
            L  A+++  K+  + +   W  ++  C     T+LG
Sbjct: 488 -LNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELG 523


>gi|110289149|gb|ABB47711.2| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 697

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 225/572 (39%), Positives = 360/572 (62%), Gaps = 5/572 (0%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           +++AC+        + +H+    +  A  V +  SL+ +Y KC   G+V D+R+VFD M 
Sbjct: 70  LITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKC---GAVADARRVFDGMP 126

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             ++ SWT++I GY Q+   D EA+ L   M++G+  PN FTFAS+LKA G    S + E
Sbjct: 127 ARDMCSWTSLIAGYAQNDMPD-EALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGE 185

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++   VK     D  VG++L+ MYAR GRM+ A   F+ L  KN VS+N ++  +A+  
Sbjct: 186 QIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFARKG 245

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           + E    +  E++  G   + +T++S+ S  + IGA+ +G+ +HA +IKSG   +  + N
Sbjct: 246 DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVGN 305

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            ++ MY++  ++  A +VF  ++ ++V++W SM+T FA++G    A+  F +M   G+  
Sbjct: 306 TILDMYAKSGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGREAVTHFEEMRKCGVHL 365

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N IT++++L+ACSH GL+ EG ++F  M  E+ +   ++HY  +VDLLGR+G L +AL F
Sbjct: 366 NQITFLSILTACSHGGLVKEGKQYF-DMMKEYNLEPEIDHYVTVVDLLGRAGLLNDALVF 424

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I  MP+     VW   LG+CR+H + ++G+ AA+ + E DP D    +LL N+YAS G W
Sbjct: 425 IFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTGQW 484

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           +  A +RK MK   + KE  CSW+E +N VH F   + +HP++ EIY + ++++++I++ 
Sbjct: 485 DAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIRKA 544

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+P+T++VL  ++E+++   L  HSEKIA+AF LI+      IR+ KN+R+CGDCH+A 
Sbjct: 545 GYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHSAF 604

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           +YIS V  REIV+RD+NRFHH   G CSC DY
Sbjct: 605 RYISKVFKREIVVRDTNRFHHFSSGSCSCGDY 636



 Score =  186 bits (471), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 112/322 (34%), Positives = 179/322 (55%), Gaps = 11/322 (3%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y  L+ +C R R+    + +H+ L  S+   +  + NSLI LY KCG + +A ++F  M 
Sbjct: 67  YHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADARRVFDGM- 125

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
             RD+ SW+S+I+ Y       +A+ +   ML   F PN + F+++++A   + +  IG 
Sbjct: 126 PARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGASASSGIGE 185

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            I+   +K  + D DV VG AL+DM+ + G +D+  A  VFD++  KN V W  +I    
Sbjct: 186 QIHALTVKYDWHD-DVYVGSALLDMYARCGRMDM--AIAVFDQLESKNGVSWNALIAGFA 242

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           + G     + +F +M  +GF    FT S V SA + +     GK +H+  I++G  L   
Sbjct: 243 RKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAF 302

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-GRDKEAVKLFSD 378
           VG +++DMYAK    GS+ D+RKVFDR+   +V++W +++T + Q G GR  EAV  F +
Sbjct: 303 VGNTILDMYAK---SGSMIDARKVFDRVDKKDVVTWNSMLTAFAQYGLGR--EAVTHFEE 357

Query: 379 MIQGQVAPNHFTFASVLKACGN 400
           M +  V  N  TF S+L AC +
Sbjct: 358 MRKCGVHLNQITFLSILTACSH 379



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/301 (28%), Positives = 155/301 (51%), Gaps = 11/301 (3%)

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           ++A     + S++ AC      + A  ++ H      A    + NSLI +Y + G + DA
Sbjct: 59  ELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLYCKCGAVADA 118

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R+ F+ +  +++ S+ +++  YA+N   ++A  LL  +       + +TFASLL  A + 
Sbjct: 119 RRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFASLLKAAGAS 178

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            + G GEQIHA  +K  +  +  + +AL+ MY+RC  ++ A  VF ++E +N +SW ++I
Sbjct: 179 ASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALI 238

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHG 621
            GFA+ G     L +F +M  +G +    TY +V SA +  G + +G W H   +     
Sbjct: 239 AGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSG-- 296

Query: 622 IVQRMEHYA--CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
             +R+  +    ++D+  +SGS+ +A +    +    DV+ W + L A   +G   LG+ 
Sbjct: 297 --ERLSAFVGNTILDMYAKSGSMIDARKVFDRVD-KKDVVTWNSMLTAFAQYG---LGRE 350

Query: 680 A 680
           A
Sbjct: 351 A 351



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 152/313 (48%), Gaps = 16/313 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T++ LLK+   S +  +G+ +H+L  +     +  + ++L+ +Y++CG ++ A  +
Sbjct: 163 PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 222

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  + +K   VSW+++I+ +  +G     + MF EM   GF    + +S+V  A +    
Sbjct: 223 FDQLESKNG-VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 281

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++  ++K G   S   VG  ++DM+ K S  +  A KVFD++ +K+ V W  M+
Sbjct: 282 LEQGKWVHAHMIKSGERLS-AFVGNTILDMYAK-SGSMIDARKVFDRVDKKDVVTWNSML 339

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           T   Q G  R+A+  F +M   G   ++ T   +++ACS   L   GKQ         L 
Sbjct: 340 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEYNLE 399

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            ++    ++VD+  +    G ++D+     +M     M  TA + G +    R  +  K+
Sbjct: 400 PEIDHYVTVVDLLGRA---GLLNDALVFIFKM----PMKPTAAVWGALLGSCRMHKNAKI 452

Query: 376 FSDMIQGQVAPNH 388
                 GQ A +H
Sbjct: 453 ------GQFAADH 459



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 53/203 (26%), Positives = 92/203 (45%), Gaps = 6/203 (2%)

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           + L  ++   +  +   + SL++  +   ++     IHA +  S F  +  + N+LI +Y
Sbjct: 50  DTLDSVDARELAATPRLYHSLITACARYRSLDDARAIHAHLAGSQFAGSVFLDNSLIHLY 109

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C  V  A +VF  M  R++ SWTS+I G+A++     AL +   ML    KPNG T+ 
Sbjct: 110 CKCGAVADARRVFDGMPARDMCSWTSLIAGYAQNDMPDEALGLLPGMLRGRFKPNGFTFA 169

Query: 595 AVLSA--CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++L A   S +  I E        YD H  V      + ++D+  R G +  A+     +
Sbjct: 170 SLLKAAGASASSGIGEQIHALTVKYDWHDDVYVG---SALLDMYARCGRMDMAIAVFDQL 226

Query: 653 PLSADVLVWRTFLGACRVHGDTE 675
             S + + W   +      GD E
Sbjct: 227 E-SKNGVSWNALIAGFARKGDGE 248


>gi|297740028|emb|CBI30210.3| unnamed protein product [Vitis vinifera]
          Length = 900

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 271/814 (33%), Positives = 444/814 (54%), Gaps = 45/814 (5%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL   +R  +  L K VH+ +   KL  +  + N+LI  Y K G +  A K+F  +    
Sbjct: 96  LLDLSVRYDDVELIKAVHASIF--KLAEDIHLANALIVAYLKLGMVPNAYKVFVGLSCP- 152

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           ++VS+++MIS +    ++  A+ +F  M   G   NE+ F A++  C    ++ +G  ++
Sbjct: 153 NVVSYTAMISGFAKSNRERQAMEIFFRMRSSGIELNEFSFVAILTVCIRLLDLELGCQLH 212

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             ++K G+ +    V  AL+ ++ K    L+S  ++FD+M  ++   W  +I+   +   
Sbjct: 213 AIVIKMGFLNYTF-VSNALMGLYGKCGY-LDSVLQLFDEMPHRDIASWNTVISSVVKEMM 270

Query: 264 PRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              A  LF DM  + GF  D FTLS ++ A   L     G+++H+  I+ G   ++ V  
Sbjct: 271 YERAFELFRDMRRIDGFRIDHFTLSTILVAARGLASMV-GREIHAHVIKIGFESNISVIN 329

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---------------- 366
           +L+  Y KC   GS+     +F++M   +V++WT +IT Y++ G                
Sbjct: 330 ALIRFYTKC---GSIKHVVALFEKMRVRDVITWTEMITAYMEFGLTDLALEVFDKMPARN 386

Query: 367 --------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
                         G   +A+  F  M++  V    FT   VL ACG L+++ +++Q++ 
Sbjct: 387 SISYNAILSGFCQNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHG 446

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARK--AFESLFEKNLVSYNTMVDAYAKNLNS 470
             +K G   + C+  +L+ M  R GRM DA+K  +  S  +   + + +M+  YA+N   
Sbjct: 447 FILKFGFGSNACIEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQP 506

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK-GEQIHARIIKSGFESNHCIYNA 529
           E+A  L  + +  G        ++ + G     A  + G+QIH   +KSGF S+  + N+
Sbjct: 507 EEAISLFCQSQLEGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFLSDLGVGNS 566

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           +I+MYS+C+N++ A +VF  M   +++SW  +I G   H     AL ++ KM   GIKP+
Sbjct: 567 IITMYSKCSNMDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPD 626

Query: 590 GITYIAVLSACSH--AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            +T++ ++SA  H  + L+    + F SM   + I   +EHY  +V +LG  G L EA E
Sbjct: 627 TVTFVLIISAYRHTNSNLVDNCRRLFLSMKTIYHIDPTVEHYTSLVGVLGYWGLLEEAEE 686

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I  MP+  +  VWR  L ACR+H +T +GK AA+ +L   P DP+ +IL+SNLY++ G 
Sbjct: 687 MINKMPIEPEASVWRALLDACRIHSNTTIGKRAAKHLLAMKPLDPSTYILVSNLYSAYGR 746

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W     +R+ M+ +   K  G SWI  +NKVH F+  + SHP+  +I++ L+ L ++  +
Sbjct: 747 WHCSDMVREEMRVKGFRKHPGRSWIIHENKVHSFYARDKSHPQAKDIHSGLELLIMECLK 806

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY+PDT+FVLHE+EE QK  +LF HS KIA  +GL+ T   +PIR+ KN+ +CGDCHT 
Sbjct: 807 AGYVPDTSFVLHEVEEHQKKDFLFYHSAKIAATYGLLMTRPGRPIRIVKNILLCGDCHTF 866

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +KY+S+VTGREI LRD++  H   +G+CSC DYW
Sbjct: 867 LKYVSIVTGREIFLRDASGHHCFLNGQCSCKDYW 900



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 59/240 (24%), Positives = 112/240 (46%), Gaps = 4/240 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   KA+     M ++G      T + +L +C       + K +H  + +     N+ 
Sbjct: 399 QNGEGSKALAFFCRMVEEGVELTDFTLTGVLNACGLLMEAKISKQIHGFILKFGFGSNAC 458

Query: 115 ILNSLISLYSKCGDLNEANKI-FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE-ML 172
           I  +L+ + ++CG + +A K+  +   ++   + W+SMI  Y    +  +AI +F +  L
Sbjct: 459 IEAALLDMCTRCGRMADAQKMFSQGSFSQSGSIIWTSMICGYARNAQPEEAISLFCQSQL 518

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           E     ++   +AV+  C       +G  I+   LK G+  SD+ VG ++I M+ K S +
Sbjct: 519 EGAMVVDKVASTAVLGVCGTLAFHEMGKQIHCHALKSGFL-SDLGVGNSIITMYSKCS-N 576

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A KVF+ M   + V W  +I          +A+ ++  M  +G  PD  T   ++SA
Sbjct: 577 MDDAIKVFNVMPAHDIVSWNGLIAGHLLHRQGDEALSVWSKMEKAGIKPDTVTFVLIISA 636


>gi|359481040|ref|XP_002266469.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Vitis vinifera]
          Length = 709

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 237/656 (36%), Positives = 383/656 (58%), Gaps = 28/656 (4%)

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           L  +  +F+ + +   T+ W  +I   T  G    ++  F+ M+ SG  PD      V+ 
Sbjct: 55  LHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLK 114

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK------------CTVDGSVDD 339
           +C+ ++    G+ +H   IR G+  D+    +L++MY+K               +G   D
Sbjct: 115 SCTLMKDLRFGESVHGCIIRLGMGFDLYTCNALMNMYSKFWSLEEVNTYKKVFDEGKTSD 174

Query: 340 S--------------RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
                          RKVF+ M   +++SW  +I+G  Q+G  + +A+ +  +M    + 
Sbjct: 175 VYSKKEKESYYLGSLRKVFEMMPKRDIVSWNTVISGNAQNGMHE-DALMMVREMGNADLR 233

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+ FT +SVL      ++    ++++ +A++ G   D  +G+SLI MYA+  R++D+ + 
Sbjct: 234 PDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRNGYDADVFIGSSLIDMYAKCTRVDDSCRV 293

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  L + + +S+N+++    +N   ++  +   ++    +  +  +F+S++   + +  +
Sbjct: 294 FYMLPQHDGISWNSIIAGCVQNGMFDEGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTL 353

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             G+Q+H  II+S F+ N  I +AL+ MY++C N+  A  +F +ME  +++SWT+MI G+
Sbjct: 354 HLGKQLHGYIIRSRFDGNVFIASALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGY 413

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           A HG A  A+ +F +M  +G+KPN + ++AVL+ACSHAGL+ E WK+F SM  ++ I+  
Sbjct: 414 ALHGHAYDAISLFKRMEVEGVKPNYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPG 473

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           +EHYA + DLLGR G L EA EFI  M +     VW T L ACRVH + EL +  ++ + 
Sbjct: 474 LEHYAAVADLLGRVGRLEEAYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLF 533

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
             DPQ+  A++LLSN+Y++AG W+    +R  M+++ + K+  CSWIE  NKVH F  G+
Sbjct: 534 TVDPQNIGAYVLLSNIYSAAGRWKDARKLRIAMRDKGMKKKPACSWIEIKNKVHAFVAGD 593

Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
            SHP    I   L  L  +++  GY+ DT  VLH++EEEQK   L  HSE++A+ FG+IS
Sbjct: 594 KSHPYYDRINEALKVLLEQMEREGYVLDTTEVLHDVEEEQKRYLLCSHSERLAITFGIIS 653

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           T     IRV KNLRVC DCHTA K+IS + GREIV+RD++RFHH KDGKCSC D+W
Sbjct: 654 TPAGTTIRVTKNLRVCVDCHTATKFISKIVGREIVVRDNSRFHHFKDGKCSCGDFW 709



 Score =  218 bits (556), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 152/556 (27%), Positives = 277/556 (49%), Gaps = 53/556 (9%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
            K +H+ + R+ L P+  +L++++S+YS    L+++  IF S+ +    ++W S+I  Y 
Sbjct: 24  AKQLHAQILRTSL-PSPSLLSTILSIYSNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYT 82

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSD 215
           + G  + ++  F++ML  G  P+   F +V+++C+  +++  G  ++G +++ G  FD  
Sbjct: 83  SHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLY 142

Query: 216 VCVGCALIDMFV----------------------------KGSVDLESAYKVFDKMTEKN 247
            C   AL++M+                             K S  L S  KVF+ M +++
Sbjct: 143 TC--NALMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMPKRD 200

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  +I+   Q G   DA+ +  +M  +   PD FTLS V+   +E      GK++H 
Sbjct: 201 IVSWNTVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHG 260

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           +AIR G   DV +G SL+DMYAKCT    VDDS +VF  +  H+ +SW +II G VQ+G 
Sbjct: 261 YAIRNGYDADVFIGSSLIDMYAKCT---RVDDSCRVFYMLPQHDGISWNSIIAGCVQNGM 317

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            D E +K F  M+  ++ PNH +F+S++ AC +L   ++ +Q++ + ++     +  + +
Sbjct: 318 FD-EGLKFFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIAS 376

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           +L+ MYA+ G +  AR  F+ +   ++VS+  M+  YA + ++  A  L   +E  GV  
Sbjct: 377 ALVDMYAKCGNIRTARWIFDKMELYDMVSWTAMIMGYALHGHAYDAISLFKRMEVEGVKP 436

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHCIYNALISMYSRCANVEA 542
           +   F ++L+  S  G + +  +    +     I  G E     Y A+  +  R   +E 
Sbjct: 437 NYVAFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEH----YAAVADLLGRVGRLEE 492

Query: 543 AFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLSAC 600
           A++   +M      S W++++     H     A ++  K+    + P  I  Y+ + +  
Sbjct: 493 AYEFISDMHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFT--VDPQNIGAYVLLSNIY 550

Query: 601 SHAGLISEGWKHFRSM 616
           S AG     WK  R +
Sbjct: 551 SAAG----RWKDARKL 562



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 145/536 (27%), Positives = 258/536 (48%), Gaps = 49/536 (9%)

Query: 1   MMTLSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIY--HLNDGR 58
           ++  SLP+P+ +    S      S  NL   S   F + P+    L+ + I   + + G 
Sbjct: 31  ILRTSLPSPSLLSTILSIY----SNLNLLHDSLLIFNSLPSPPTTLAWKSIIRCYTSHGL 86

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
              ++     M   G +PD + +  +LKSC   ++   G+ VH  + R  +  +    N+
Sbjct: 87  FLHSLSFFIQMLASGKYPDHNVFPSVLKSCTLMKDLRFGESVHGCIIRLGMGFDLYTCNA 146

Query: 119 LISLYSKCGDLNEAN-----------------------------KIFKSMGNKRDIVSWS 149
           L+++YSK   L E N                             K+F+ M  KRDIVSW+
Sbjct: 147 LMNMYSKFWSLEEVNTYKKVFDEGKTSDVYSKKEKESYYLGSLRKVFEMMP-KRDIVSWN 205

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           ++IS     G   DA+ M  EM      P+ +  S+V+   +   N+  G  I+G+ ++ 
Sbjct: 206 TVISGNAQNGMHEDALMMVREMGNADLRPDSFTLSSVLPIFAEYVNLLKGKEIHGYAIRN 265

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
           GY D+DV +G +LIDM+ K +  ++ + +VF  + + + + W  +I  C Q G   + ++
Sbjct: 266 GY-DADVFIGSSLIDMYAKCT-RVDDSCRVFYMLPQHDGISWNSIIAGCVQNGMFDEGLK 323

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
            F  M+++   P+  + S ++ AC+ L     GKQLH + IR+    +V +  +LVDMYA
Sbjct: 324 FFQQMLIAKIKPNHVSFSSIMPACAHLTTLHLGKQLHGYIIRSRFDGNVFIASALVDMYA 383

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           KC   G++  +R +FD+M  ++++SWTA+I GY    G   +A+ LF  M    V PN+ 
Sbjct: 384 KC---GNIRTARWIFDKMELYDMVSWTAMIMGYALH-GHAYDAISLFKRMEVEGVKPNYV 439

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS-MYARSGRMEDARKAFES 448
            F +VL AC +    + A + +    +  R +      + ++ +  R GR+E+A +    
Sbjct: 440 AFMAVLTACSHAGLVDEAWKYFNSMTQDYRIIPGLEHYAAVADLLGRVGRLEEAYEFISD 499

Query: 449 L-FEKNLVSYNTMVDA--YAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +  E     ++T++ A    KN+  +EK  + L  ++   +G  AY   S +  A+
Sbjct: 500 MHIEPTGSVWSTLLAACRVHKNIELAEKVSKKLFTVDPQNIG--AYVLLSNIYSAA 553



 Score = 53.5 bits (127), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 58/109 (53%), Gaps = 2/109 (1%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED- 552
           +LL   SS+ +  + +Q+HA+I+++   S   + + ++S+YS    +  +  +F  +   
Sbjct: 10  TLLQNPSSVKSKSQAKQLHAQILRTSLPSP-SLLSTILSIYSNLNLLHDSLLIFNSLPSP 68

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
              ++W S+I  +  HG    +L  F +MLA G  P+   + +VL +C+
Sbjct: 69  PTTLAWKSIIRCYTSHGLFLHSLSFFIQMLASGKYPDHNVFPSVLKSCT 117


>gi|357440191|ref|XP_003590373.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479421|gb|AES60624.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 840

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/613 (39%), Positives = 364/613 (59%), Gaps = 25/613 (4%)

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
            L M L GF       + +++ C     F  G+++H+  I+T     V +   L+ +Y K
Sbjct: 231 LLQMALHGFNMKFENYNAILNECVNKRAFREGQRVHAHMIKTRYLPSVFLRTRLIVLYTK 290

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM---IQGQVA-- 385
           C    S+ D+  VFD M + NV+SWTA+I+ Y Q G   +     F+D+   + G  A  
Sbjct: 291 C---DSLGDAHNVFDEMPERNVVSWTAMISAYSQRGYASQALNLFFADVKISLTGVYAID 347

Query: 386 ---------------PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
                          PN FTFA+VL +C + L   +  Q+++  +K        VG+SL+
Sbjct: 348 KLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFILGRQIHSLIIKLNYEDHVFVGSSLL 407

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            MYA+ G++ +AR  FE L E+++VS   ++  YA+    E+A EL   ++  G+ ++  
Sbjct: 408 DMYAKDGKIHEARTVFECLPERDVVSCTAIISGYAQLGLDEEALELFRRLQGEGMKSNYV 467

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           T+  +L+  S + A+  G+Q+H  +++S   S   + N+LI MYS+C N+  + ++F  M
Sbjct: 468 TYTGVLTALSGLAALDLGKQVHNHVLRSEIPSFVVLQNSLIDMYSKCGNLTYSRRIFDTM 527

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEG 609
            +R VISW +M+ G++KHG     L++F  M  +  +KP+ +T +AVLS CSH GL  +G
Sbjct: 528 YERTVISWNAMLVGYSKHGEGREVLKLFTLMREETKVKPDSVTILAVLSGCSHGGLEDKG 587

Query: 610 WKHFRSMYDEHGIVQ-RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
              F  M      V+ +MEHY C+VDLLGRSG + EA EFI+ MP      +W + LGAC
Sbjct: 588 LNIFNDMSSGKIEVEPKMEHYGCVVDLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGAC 647

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           RVH + ++G+ A + +LE +P +   +++LSNLYASAG WE V+++R  M ++ + KE G
Sbjct: 648 RVHSNVDIGEFAGQQLLEIEPGNAGNYVILSNLYASAGRWEDVSSLRDLMLKKTVTKEPG 707

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
            S IE D  +H FH  + SHP+  EI  ++ +L+   KE GY+PD + VLH+++EEQK +
Sbjct: 708 RSSIELDQVLHTFHASDRSHPRREEICMKVKELSTSFKEVGYVPDLSCVLHDVDEEQKEK 767

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
            L  HSEK+A++FGLI++  S PIRV KNLR+C DCH   KYIS V GRE+ LRD NRFH
Sbjct: 768 ILLGHSEKLALSFGLIASPASVPIRVIKNLRICVDCHNFAKYISKVYGREVSLRDKNRFH 827

Query: 849 HIKDGKCSCNDYW 861
            I  GKCSC DYW
Sbjct: 828 RIVGGKCSCEDYW 840



 Score =  189 bits (481), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 140/480 (29%), Positives = 246/480 (51%), Gaps = 52/480 (10%)

Query: 40  PTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
           P+ S  LS    + HL    +Q A+   ++          + Y+ +L  C+  R F  G+
Sbjct: 212 PSNSRTLSTFTTHIHLQQPLLQMALHGFNM--------KFENYNAILNECVNKRAFREGQ 263

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
            VH+ + +++  P+  +   LI LY+KC  L +A+ +F  M  +R++VSW++MIS+Y  R
Sbjct: 264 RVHAHMIKTRYLPSVFLRTRLIVLYTKCDSLGDAHNVFDEMP-ERNVVSWTAMISAYSQR 322

Query: 159 GKQVDAIHMF-------------VEMLELG------FC--PNEYCFSAVIRACSNTENVA 197
           G    A+++F             ++ L+L        C  PNE+ F+ V+ +C+++    
Sbjct: 323 GYASQALNLFFADVKISLTGVYAIDKLKLSNPNRPWVCTEPNEFTFATVLTSCTSSLGFI 382

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +G  I+  ++K  Y D  V VG +L+DM+ K    +  A  VF+ + E++ V  T +I+ 
Sbjct: 383 LGRQIHSLIIKLNYEDH-VFVGSSLLDMYAKDG-KIHEARTVFECLPERDVVSCTAIISG 440

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             QLG   +A+ LF  +   G   +  T +GV++A S L     GKQ+H+  +R+ +   
Sbjct: 441 YAQLGLDEEALELFRRLQGEGMKSNYVTYTGVLTALSGLAALDLGKQVHNHVLRSEIPSF 500

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V +  SL+DMY+KC   G++  SR++FD M +  V+SW A++ GY +  G  +E +KLF+
Sbjct: 501 VVLQNSLIDMYSKC---GNLTYSRRIFDTMYERTVISWNAMLVGYSKH-GEGREVLKLFT 556

Query: 378 DMI-QGQVAPNHFTFASVLKAC--GNLLDS--NVAEQVYTHAVKRGRALDD--CVGNSLI 430
            M  + +V P+  T  +VL  C  G L D   N+   + +  ++    ++   CV    +
Sbjct: 557 LMREETKVKPDSVTILAVLSGCSHGGLEDKGLNIFNDMSSGKIEVEPKMEHYGCV----V 612

Query: 431 SMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAFELLHEIEDTGVG 486
            +  RSGR+E+A +  + + FE     + +++ A   + N    E A + L EIE    G
Sbjct: 613 DLLGRSGRVEEAFEFIKKMPFEPTAAIWGSLLGACRVHSNVDIGEFAGQQLLEIEPGNAG 672


>gi|449455158|ref|XP_004145320.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449470513|ref|XP_004152961.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
 gi|449523079|ref|XP_004168552.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 733

 Score =  468 bits (1205), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 244/663 (36%), Positives = 383/663 (57%), Gaps = 38/663 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVS 291
           L+ A  +FD++ + N   W  +I        P  +  +FLD++     LP++FT   V+ 
Sbjct: 75  LDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIK 134

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A SEL+    G  +H  AI+    +D+ +  SLV  Y  C   G +  + ++F  +   +
Sbjct: 135 AASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGAC---GDLSMAERLFKGISCKD 191

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SW ++I+ + Q G   ++A++LF  M +  V PN  T   VL AC   LD      V 
Sbjct: 192 VVSWNSMISAFAQ-GNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVC 250

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK----- 466
           ++  ++G  +D  + N+++ MY + G ++DA+K F+ + E+++ S+  M+D YAK     
Sbjct: 251 SYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYD 310

Query: 467 --------------------------NLNSEKAFELLHEIEDTGVGT-SAYTFASLLSGA 499
                                     N   ++A  + +E++ + +      T  S LS  
Sbjct: 311 AARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSAC 370

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           + +GAI  G  IH  I + G   N  + ++L+ MY++C ++E A +VF  +E+R+V  W+
Sbjct: 371 AQLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWS 430

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G   HG    A+++F++M    +KPN +T+  VL ACSHAGL+ EG   F  M   
Sbjct: 431 AMIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEMEPV 490

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           +G+V  M+HYACMVD+LGR+G L EA+E I  M  +    VW   LGAC +H + ELG+ 
Sbjct: 491 YGVVPEMKHYACMVDILGRAGFLEEAMELINEMSTTPSASVWGALLGACSLHMNVELGEL 550

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           A++ +L+ +P++  A +LLSN+YA  G WE V+ +RK M++  L KE GCS IEA+  VH
Sbjct: 551 ASDQLLKLEPRNHGAIVLLSNIYAKTGRWEKVSELRKLMRDTELKKEPGCSSIEANGNVH 610

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ-KVQYLFQHSEKIA 798
           +F VG+ +HP +  IY++L+++A K+K  GY P+ + +L  +EE+  K Q L  HSEK+A
Sbjct: 611 EFLVGDNTHPLSSNIYSKLEEIATKLKSVGYEPNKSHLLQLIEEDDLKEQALSLHSEKLA 670

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           +AFGL++ + S+PIRV KNLR+CGDCH   K +S V  R+I+LRD  RFHH +DG CSC 
Sbjct: 671 IAFGLVTLAPSQPIRVVKNLRICGDCHAFAKLVSRVYDRDILLRDRYRFHHFRDGHCSCM 730

Query: 859 DYW 861
           DYW
Sbjct: 731 DYW 733



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 141/562 (25%), Positives = 261/562 (46%), Gaps = 80/562 (14%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL--EPNSVILNSLISLYSKCGDLNE 131
           NH  L T    +  C  S+     K VH+ + R+ L  +P S       S  S    L+ 
Sbjct: 25  NHQILST----IDKCSSSKQL---KEVHARMLRTGLFFDPFSASKLFTASALSSFSTLDY 77

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRAC 190
           A  +F  +  + ++ +W+++I +Y +      +  +F+++L+     PN++ F  VI+A 
Sbjct: 78  ARNLFDQIP-QPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAA 136

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
           S  +   +G  ++G  +K   F  D+ +  +L+  F     DL  A ++F  ++ K+ V 
Sbjct: 137 SELKASRVGTAVHGMAIKLS-FGMDLYILNSLVR-FYGACGDLSMAERLFKGISCKDVVS 194

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  MI+   Q  CP DA+ LFL M     +P+  T+ GV+SAC++      G+ + S+  
Sbjct: 195 WNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIE 254

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---- 366
           R G+ +D+ +  +++DMY KC   GSVDD++K+FD M + +V SWT ++ GY + G    
Sbjct: 255 RKGIKVDLTLCNAMLDMYTKC---GSVDDAQKLFDEMPERDVFSWTIMLDGYAKMGDYDA 311

Query: 367 --------------------------GRDKEAVKLFSDMIQGQVA-PNHFTFASVLKACG 399
                                     G+ KEA+ +F+++   ++A P+  T  S L AC 
Sbjct: 312 ARLVFNAMPVKEIAAWNVLISAYEQNGKPKEALAIFNELQLSKIAKPDEVTLVSTLSACA 371

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L   ++   ++ +  + G  L+  + +SL+ MYA+ G +E A + F S+ E+++  ++ 
Sbjct: 372 QLGAIDLGGWIHVYIKREGIVLNCHLISSLVDMYAKCGSLEKALEVFYSVEERDVYVWSA 431

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+     +   + A +L  E+++  V  ++ TF ++L   S  G + +G      +    
Sbjct: 432 MIAGLGMHGRGKAAIDLFFEMQEAKVKPNSVTFTNVLCACSHAGLVDEGRVFFHEM---- 487

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
                                E  + V  EM+      +  M+    + GF   A+E+  
Sbjct: 488 ---------------------EPVYGVVPEMK-----HYACMVDILGRAGFLEEAMELIN 521

Query: 580 KMLADGIKPNGITYIAVLSACS 601
           +M      P+   + A+L ACS
Sbjct: 522 EM---STTPSASVWGALLGACS 540



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/528 (28%), Positives = 247/528 (46%), Gaps = 79/528 (14%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q  +  LDL+ +  + P+  T+  ++K+    +   +G  VH +  +     +  ILNSL
Sbjct: 108 QSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSL 167

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           +  Y  CGDL+ A ++FK +  K D+VSW+SMIS++       DA+ +F++M      PN
Sbjct: 168 VRFYGACGDLSMAERLFKGISCK-DVVSWNSMISAFAQGNCPEDALELFLKMERENVMPN 226

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
                 V+ AC+   ++  G  +  ++ + G    D+ +  A++DM+ K GSVD   A K
Sbjct: 227 SVTMVGVLSACAKKLDLEFGRWVCSYIERKG-IKVDLTLCNAMLDMYTKCGSVD--DAQK 283

Query: 239 VFDKMTEKNTVGWTLM-------------------------------ITRCTQLGCPRDA 267
           +FD+M E++   WT+M                               I+   Q G P++A
Sbjct: 284 LFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKPKEA 343

Query: 268 IRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           + +F ++ LS    PD  TL   +SAC++L     G  +H +  R G+ L+  +  SLVD
Sbjct: 344 LAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHVYIKREGIVLNCHLISSLVD 403

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MYAKC   GS++ + +VF  + + +V  W+A+I G +   GR K A+ LF +M + +V P
Sbjct: 404 MYAKC---GSLEKALEVFYSVEERDVYVWSAMIAG-LGMHGRGKAAIDLFFEMQEAKVKP 459

Query: 387 NHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
           N  TF +VL AC    L+D     +V+ H ++               +Y     M+    
Sbjct: 460 NSVTFTNVLCACSHAGLVDEG---RVFFHEME--------------PVYGVVPEMK---- 498

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
                       Y  MVD   +    E+A EL++E+  T    SA  + +LL   S    
Sbjct: 499 -----------HYACMVDILGRAGFLEEAMELINEMSTT---PSASVWGALLGACSLHMN 544

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +  GE    +++K     NH     L ++Y++    E   ++ K M D
Sbjct: 545 VELGELASDQLLKLE-PRNHGAIVLLSNIYAKTGRWEKVSELRKLMRD 591



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 209/439 (47%), Gaps = 41/439 (9%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K++H+  +RTGL  D      L    A  +   ++D +R +FD++   N+ +W  +I  Y
Sbjct: 42  KEVHARMLRTGLFFDPFSASKLFTASALSSF-STLDYARNLFDQIPQPNLYTWNTLIRAY 100

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
             S    +  V     + + +  PN FTF  V+KA   L  S V   V+  A+K    +D
Sbjct: 101 ASSSDPFQSFVIFLDLLDKCEDLPNKFTFPFVIKAASELKASRVGTAVHGMAIKLSFGMD 160

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             + NSL+  Y   G +  A + F+ +  K++VS+N+M+ A+A+    E A EL  ++E 
Sbjct: 161 LYILNSLVRFYGACGDLSMAERLFKGISCKDVVSWNSMISAFAQGNCPEDALELFLKMER 220

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             V  ++ T   +LS  +    +  G  + + I + G + +  + NA++ MY++C +V+ 
Sbjct: 221 ENVMPNSVTMVGVLSACAKKLDLEFGRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDD 280

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHG--FAAR--------------------------- 573
           A ++F EM +R+V SWT M+ G+AK G   AAR                           
Sbjct: 281 AQKLFDEMPERDVFSWTIMLDGYAKMGDYDAARLVFNAMPVKEIAAWNVLISAYEQNGKP 340

Query: 574 --ALEIFYKM-LADGIKPNGITYIAVLSACSHAGLIS-EGWKHFRSMYDEHGIVQRMEHY 629
             AL IF ++ L+   KP+ +T ++ LSAC+  G I   GW H        GIV      
Sbjct: 341 KEALAIFNELQLSKIAKPDEVTLVSTLSACAQLGAIDLGGWIHV--YIKREGIVLNCHLI 398

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE-QD 688
           + +VD+  + GSL +ALE   S+    DV VW   +    +HG    GK A ++  E Q+
Sbjct: 399 SSLVDMYAKCGSLEKALEVFYSVE-ERDVYVWSAMIAGLGMHGR---GKAAIDLFFEMQE 454

Query: 689 PQDPAAHILLSNLYASAGH 707
            +     +  +N+  +  H
Sbjct: 455 AKVKPNSVTFTNVLCACSH 473



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 94/338 (27%), Positives = 163/338 (48%), Gaps = 20/338 (5%)

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           FS +    +  NH   +++ K C +   S   ++V+   ++ G   D    + L +  A 
Sbjct: 14  FSTLNNNLLFRNHQILSTIDK-CSS---SKQLKEVHARMLRTGLFFDPFSASKLFTASAL 69

Query: 436 SG--RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF----ELLHEIEDTGVGTSA 489
           S    ++ AR  F+ + + NL ++NT++ AYA + +  ++F    +LL + ED     + 
Sbjct: 70  SSFSTLDYARNLFDQIPQPNLYTWNTLIRAYASSSDPFQSFVIFLDLLDKCEDL---PNK 126

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +TF  ++  AS + A   G  +H   IK  F  +  I N+L+  Y  C ++  A ++FK 
Sbjct: 127 FTFPFVIKAASELKASRVGTAVHGMAIKLSFGMDLYILNSLVRFYGACGDLSMAERLFKG 186

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           +  ++V+SW SMI+ FA+      ALE+F KM  + + PN +T + VLSAC+   L  E 
Sbjct: 187 ISCKDVVSWNSMISAFAQGNCPEDALELFLKMERENVMPNSVTMVGVLSACAKK-LDLEF 245

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
            +   S  +  GI   +     M+D+  + GS+ +A +    MP   DV  W   L    
Sbjct: 246 GRWVCSYIERKGIKVDLTLCNAMLDMYTKCGSVDDAQKLFDEMP-ERDVFSWTIMLDGYA 304

Query: 670 VHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASAG 706
             GD +    AA ++    P ++ AA  +L + Y   G
Sbjct: 305 KMGDYD----AARLVFNAMPVKEIAAWNVLISAYEQNG 338


>gi|395146511|gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 253/666 (37%), Positives = 383/666 (57%), Gaps = 41/666 (6%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVS 291
           L+ A KVFD++ + N   W ++I        P  ++ +F+ M+  S F P++FT   ++ 
Sbjct: 189 LDYARKVFDQIPQPNLYSWNILIRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIK 248

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A +E   F  GK +H  AI+T    DV V  SL+  YA C   G +D +  VF+ +  +N
Sbjct: 249 AVAERRCFLVGKAVHGMAIKTSFGDDVFVLNSLIHFYASC---GHLDLAYLVFEMIEGNN 305

Query: 352 --VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             ++SW +++TG+VQ G  DK A+ LF  M    V PN  T  SV+ AC   ++  +  +
Sbjct: 306 KDIVSWNSMVTGFVQGGYPDK-ALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRK 364

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK--- 466
           V  +  +    ++  V N+ I M+ + G +E AR  F+++ ++++VS+ T++D YAK   
Sbjct: 365 VCDYIDRNEMMMNLNVCNATIDMFVKCGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSE 424

Query: 467 ----------------------------NLNSEKAFELLHEIEDT--GVGTSAYTFASLL 496
                                       +   ++A  +  E++ T  G      T  S L
Sbjct: 425 HGIARDIFDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTL 484

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           S  + +GA+  GE IH  I K   + N  +  +LI MYS+  +VE A +VF  + +++V 
Sbjct: 485 SACAQLGAMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNKDVF 544

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
            W++MI G A HG    A+E+F  M    +KPN +T+  +L ACSH+GL+ EG + F  M
Sbjct: 545 VWSAMIAGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLFDEM 604

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
              +G+V + +HY+CMVD+LGR+G L EAL+FI  MPL+    VW   LGAC +HG+ EL
Sbjct: 605 ERVYGVVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLEL 664

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            + A   +LE +P +  A++LLSNLYA  G WE V+ +R++M++  L KE GCS IE D 
Sbjct: 665 AEKACSRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDG 724

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ-KVQYLFQHSE 795
            VH+F VG+ +HP + +IYA+LD++  +++  GY+ +T  +L  +EEE+ K + L  HSE
Sbjct: 725 TVHEFIVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEEMKEKALKLHSE 784

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           K+A+AFGLI     + IR+ KNLRVC DCHT  K +S V GR+IVLRD  RFHH   G C
Sbjct: 785 KMAIAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHC 844

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 845 SCQDYW 850



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 249/537 (46%), Gaps = 92/537 (17%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           +Q  +  + ++      P+  T+ +L+K+    R F +GK VH +  ++    +  +LNS
Sbjct: 221 IQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTSFGDDVFVLNS 280

Query: 119 LISLYSKCGDLNEANKIFKSM-GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           LI  Y+ CG L+ A  +F+ + GN +DIVSW+SM++ +V  G    A+ +F  M   G  
Sbjct: 281 LIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDLFERMRNEGVH 340

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS-----DVCVGCALIDMFVK-GSV 231
           PN     +V+ AC+ T N+ +G  +      C Y D      ++ V  A IDMFVK G V
Sbjct: 341 PNAVTMVSVMSACAKTMNLTLGRKV------CDYIDRNEMMMNLNVCNATIDMFVKCGEV 394

Query: 232 DLES-----------------------------AYKVFDKMTEKNTVGWTLMITRCTQLG 262
           ++                               A  +FD M  K+   W ++I+   Q G
Sbjct: 395 EIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGYEQSG 454

Query: 263 CPRDAIRLFLDMIL--SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            P++A+ +F ++ L  SG  PD+ TL   +SAC++L     G+ +H +  +  + L+  +
Sbjct: 455 RPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIHGYIKKERIQLNRNL 514

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             SL+DMY+K    G V+ + +VF  + + +V  W+A+I G     GR + A++LF DM 
Sbjct: 515 ATSLIDMYSK---SGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMH-GRGEAAIELFLDMQ 570

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           + QV PN  TF ++L AC                                   + SG ++
Sbjct: 571 ETQVKPNSVTFTNLLCAC-----------------------------------SHSGLVD 595

Query: 441 DARKAFESLFEKNLV-----SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
           + ++ F+ +     V      Y+ MVD   +  + E+A +    IE   +  SA  + +L
Sbjct: 596 EGKRLFDEMERVYGVVPKTKHYSCMVDVLGRAGHLEEALKF---IEGMPLAPSASVWGAL 652

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           L      G +   E+  +R+++     NH  Y  L ++Y++  + E   ++ ++M D
Sbjct: 653 LGACCIHGNLELAEKACSRLLEIE-PGNHGAYVLLSNLYAKTGDWEGVSELRQQMRD 708



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 203/447 (45%), Gaps = 46/447 (10%)

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
           F   KQ+H+  +RT    D      L    A  +   ++D +RKVFD++   N+ SW  +
Sbjct: 152 FKQLKQIHAQMLRTNKLHDPYAASELFTAAAFSSF-SALDYARKVFDQIPQPNLYSWNIL 210

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I     S    +  +     +      PN FTF  ++KA        V + V+  A+K  
Sbjct: 211 IRALATSSDPIQSVLVFIRMLHDSPFGPNKFTFPVLIKAVAERRCFLVGKAVHGMAIKTS 270

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESL--FEKNLVSYNTMVDAYAKNLNSEKAFEL 476
              D  V NSLI  YA  G ++ A   FE +    K++VS+N+MV  + +    +KA +L
Sbjct: 271 FGDDVFVLNSLIHFYASCGHLDLAYLVFEMIEGNNKDIVSWNSMVTGFVQGGYPDKALDL 330

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
              + + GV  +A T  S++S  +    +  G ++   I ++    N  + NA I M+ +
Sbjct: 331 FERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVCNATIDMFVK 390

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAK---HGFA---------------------- 571
           C  VE A  +F  ME R+V+SWT++I G+AK   HG A                      
Sbjct: 391 CGEVEIARGLFDNMEKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDIPAWNVLISGY 450

Query: 572 ------ARALEIF--YKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGI 622
                   AL IF   ++   G +P+ +T ++ LSAC+  G +  G W H    Y +   
Sbjct: 451 EQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH---GYIKKER 507

Query: 623 VQRMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           +Q   + A  ++D+  +SG + +A+E   S+  + DV VW   +    +HG    G+ A 
Sbjct: 508 IQLNRNLATSLIDMYSKSGDVEKAIEVFHSIG-NKDVFVWSAMIAGLAMHGR---GEAAI 563

Query: 682 EMILE-QDPQDPAAHILLSNLYASAGH 707
           E+ L+ Q+ Q     +  +NL  +  H
Sbjct: 564 ELFLDMQETQVKPNSVTFTNLLCACSH 590



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 131/282 (46%), Gaps = 36/282 (12%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   KA+   + M  +G HP+  T   ++ +C ++ N  LG+ V   + R+++  N  + 
Sbjct: 322 GYPDKALDLFERMRNEGVHPNAVTMVSVMSACAKTMNLTLGRKVCDYIDRNEMMMNLNVC 381

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN------------------- 157
           N+ I ++ KCG++  A  +F +M  KRD+VSW+++I  Y                     
Sbjct: 382 NATIDMFVKCGEVEIARGLFDNM-EKRDVVSWTTIIDGYAKMSEHGIARDIFDSMPRKDI 440

Query: 158 --------------RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
                         R K+  AI   +++ + G  P++    + + AC+    + IG  I+
Sbjct: 441 PAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLGAMDIGEWIH 500

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G++ K      +  +  +LIDM+ K S D+E A +VF  +  K+   W+ MI      G 
Sbjct: 501 GYIKK-ERIQLNRNLATSLIDMYSK-SGDVEKAIEVFHSIGNKDVFVWSAMIAGLAMHGR 558

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
              AI LFLDM  +   P+  T + ++ ACS   L   GK+L
Sbjct: 559 GEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRL 600



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 54/171 (31%), Positives = 91/171 (53%), Gaps = 4/171 (2%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKA--IFTLDLMTQKGNHPDLDTYSLLLKSCIRSR 92
           F + P    P  N LI  +   GR ++A  IF    +T+ G  PD  T    L +C +  
Sbjct: 432 FDSMPRKDIPAWNVLISGYEQSGRPKEALAIFRELQLTKSGARPDQVTLLSTLSACAQLG 491

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
              +G+ +H  + + +++ N  +  SLI +YSK GD+ +A ++F S+GNK D+  WS+MI
Sbjct: 492 AMDIGEWIHGYIKKERIQLNRNLATSLIDMYSKSGDVEKAIEVFHSIGNK-DVFVWSAMI 550

Query: 153 SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           +     G+   AI +F++M E    PN   F+ ++ ACS++  V  G  ++
Sbjct: 551 AGLAMHGRGEAAIELFLDMQETQVKPNSVTFTNLLCACSHSGLVDEGKRLF 601


>gi|147860004|emb|CAN81045.1| hypothetical protein VITISV_006763 [Vitis vinifera]
          Length = 1321

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 247/667 (37%), Positives = 393/667 (58%), Gaps = 10/667 (1%)

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           GF   +Y FSA +  C     V +G   + F++K G   SD  V  +LIDM+ K G VD 
Sbjct: 109 GFPHRQYVFSA-LSFCGREGCVELGRRWHCFVVKIG-LGSDEFVCTSLIDMYAKCGEVD- 165

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            SA +V+DKMT  +      +I+   + G    A ++F+ +   G  P+ +T S +++ C
Sbjct: 166 -SAVRVYDKMTSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVC 224

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             +     GKQLH+  ++     +  VG +L+ +Y+KC   G ++++  VF+ +   N++
Sbjct: 225 GTISAIQEGKQLHAHVVKMQYLSETAVGNALLTLYSKC---GMMEEAEIVFESLRQRNII 281

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SWTA I G+ Q G   K+A+K FS M +  + PN FTF+ VL +CG + D       +T 
Sbjct: 282 SWTASINGFYQHGDF-KKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQ 340

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEK 472
            +K+G A    VG ++I MY+  G M++A K F+ +    + VS+N ++  Y  N   EK
Sbjct: 341 VIKKGMASGVFVGTAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEK 400

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A E    +    V  + +T++++    SS  ++    QIH+R+IKS  ESN  + ++LI 
Sbjct: 401 AMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLIE 460

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
            Y++C ++E A QVF ++ D +V+SW S+I  ++++G   +A+ +  KM+ +G KP   T
Sbjct: 461 AYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXT 520

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VLSACSH+GL+ EG + F+SM  ++ I     H +CMVD+LGR+G L  AL+FI+ +
Sbjct: 521 FLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHCSCMVDILGRAGQLENALDFIKKL 580

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
            +     +WR  L ACR + + ++ ++ AE IL+ +P D   ++ LSN+YA  G W    
Sbjct: 581 TMKPTASIWRPLLAACRYNSNLQMAEYVAEKILDLEPNDATVYVTLSNMYAEVGRWADAE 640

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           N R+ M+++ + KE GCSWIE +NK++KF   + +HP+  ++Y +L QL  +I++ GY P
Sbjct: 641 NQRRLMEQKEISKEPGCSWIEVNNKMYKFFSHDKAHPEMPKVYEKLKQLVRQIQDIGYSP 700

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
            T  VLH    + K Q +  HSEK+AV FGL+S    KPIRV KNLRVC DC++ +KYIS
Sbjct: 701 PTTTVLHPESRQPKEQLILYHSEKLAVCFGLLSLPPGKPIRVLKNLRVCLDCYSTMKYIS 760

Query: 833 MVTGREI 839
            +T R I
Sbjct: 761 RITDRYI 767



 Score =  310 bits (793), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 165/503 (32%), Positives = 275/503 (54%), Gaps = 35/503 (6%)

Query: 232  DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
             L +A K+FDK+   N   W ++   C + G   +A+  F +M   G  P++F L  ++ 
Sbjct: 853  QLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEGLRPNQFVLPSILK 912

Query: 292  ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            AC  L    +G+ +H+  ++     D  +  +L+ MY+KC   G V+ + +VFD ++D +
Sbjct: 913  ACGHLSDRRTGENMHTVILKNSFESDAYIISALIYMYSKC---GHVEKACRVFDWIVDKD 969

Query: 352  VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++   A+++GY Q G    EA+ L   M Q  V PN  ++ +++     + D ++  +V+
Sbjct: 970  LVVMNAMVSGYAQHGFV-HEALBLVQKMQQAGVKPNVVSWNTLIAGFSQVGDKSMVSEVF 1028

Query: 412  THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
                  G                                E ++VS+ +++  + +N ++ 
Sbjct: 1029 RLMTANG-------------------------------VEPDVVSWTSVISGFVQNFHNH 1057

Query: 472  KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            + F+   E+ D G   S+ T +SLL   +++  +  G++IH   +  G E +  + +AL+
Sbjct: 1058 EGFDAFKEMLDQGFCPSSVTISSLLPACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALV 1117

Query: 532  SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
             MY++C  +  A  +F  M +RN ++W S+I G+A HG+   A+E+F +M     K + +
Sbjct: 1118 DMYAKCGYISEAKILFYMMPERNTVTWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHL 1177

Query: 592  TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
            T+ AVL+ACSHAG++  G   F  M +++ I  R+EHYACMVDLLGR+G L+EA + I++
Sbjct: 1178 TFTAVLNACSHAGMVELGESLFXKMQEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKA 1237

Query: 652  MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
            MP+  D  VW   LGACR HG+ EL + AAE + E +P+ P + +LLSNLYA AG W   
Sbjct: 1238 MPVEPDKFVWGALLGACRNHGNIELAEVAAEHLFELEPESPGSSLLLSNLYADAGRWGNA 1297

Query: 712  ANIRKRMKERNLIKEAGCSWIEA 734
            A ++K MK+R   K  GCSWIEA
Sbjct: 1298 AKMKKMMKQRKFGKFPGCSWIEA 1320



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 146/532 (27%), Positives = 270/532 (50%), Gaps = 18/532 (3%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  P        L  C R     LG+  H  + +  L  +  +  SLI +Y+KCG+++ A
Sbjct: 108 GGFPHRQYVFSALSFCGREGCVELGRRWHCFVVKIGLGSDEFVCTSLIDMYAKCGEVDSA 167

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            +++  M    D  + + +IS+Y   G  V A  +F+++  +G  PN Y +S ++  C  
Sbjct: 168 VRVYDKM-TSLDAATCNCLISAYARNGFFVQAFQVFMQIGNMGTRPNHYTYSTMLAVCGT 226

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
              +  G  ++  ++K  Y  S+  VG AL+ ++ K  + +E A  VF+ + ++N + WT
Sbjct: 227 ISAIQEGKQLHAHVVKMQYL-SETAVGNALLTLYSKCGM-MEEAEIVFESLRQRNIISWT 284

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
             I    Q G  + A++ F  M  SG  P+ FT S V+++C  ++ F  G+  H+  I+ 
Sbjct: 285 ASINGFYQHGDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKK 344

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LDHNVMSWTAIITGYVQSGGRDK 370
           G+A  V VG +++DMY+     G +D++ K F +M     NV SW A+I GYV +   +K
Sbjct: 345 GMASGVFVGTAIIDMYSGL---GEMDEAEKQFKQMGRAASNV-SWNALIAGYVLNEKIEK 400

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
            A++ F  M++  VA N FT++++ KAC +        Q+++  +K     +  V +SLI
Sbjct: 401 -AMEAFCRMVKEDVACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSNVESNLHVASSLI 459

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
             Y + G +E+A + F  + + ++VS+N+++ AY++N +  KA  LL ++ + G   ++ 
Sbjct: 460 EAYTQCGSLENAVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSX 519

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKS---GFESNHCIYNALISMYSRCANVEAAFQVF 547
           TF ++LS  S  G + +G++    +++      E  HC  + ++ +  R   +E A    
Sbjct: 520 TFLTVLSACSHSGLVQEGQEFFKSMVQDYSIQPEETHC--SCMVDILGRAGQLENALDFI 577

Query: 548 KEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           K++  +   S W  ++     +     A  +  K+L   ++PN  T    LS
Sbjct: 578 KKLTMKPTASIWRPLLAACRYNSNLQMAEYVAEKIL--DLEPNDATVYVTLS 627



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 127/536 (23%), Positives = 251/536 (46%), Gaps = 45/536 (8%)

Query: 36   FIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
            +I  P  +      LI   N  RV +     ++ T +      DTY+  +    R R  +
Sbjct: 766  YIPTPLAAAAAMQSLINRANVYRVYR-----NISTHRTFQSSSDTYAKAIDMYARDRALY 820

Query: 96   LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
             G+ +H+ L    L   +     L+S Y++CG L+ A K+F  + N  +I  W  +  + 
Sbjct: 821  RGRALHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNT-NIRRWIVLTGAC 879

Query: 156  VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              RG   +A+  F EM + G  PN++   ++++AC +  +   G  ++  +LK   F+SD
Sbjct: 880  ARRGFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILK-NSFESD 938

Query: 216  VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
              +  ALI M+ K    +E A +VFD + +K+ V    M++   Q G   +A+ L   M 
Sbjct: 939  AYIISALIYMYSKCG-HVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQ 997

Query: 276  LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
             +G  P+  + + +++  S++      K + S                  +++   T +G
Sbjct: 998  QAGVKPNVVSWNTLIAGFSQV----GDKSMVS------------------EVFRLMTANG 1035

Query: 336  SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
                        ++ +V+SWT++I+G+VQ+   + E    F +M+     P+  T +S+L
Sbjct: 1036 ------------VEPDVVSWTSVISGFVQN-FHNHEGFDAFKEMLDQGFCPSSVTISSLL 1082

Query: 396  KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
             AC N+ +    ++++ +A+  G   D  V ++L+ MYA+ G + +A+  F  + E+N V
Sbjct: 1083 PACTNVANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKCGYISEAKILFYMMPERNTV 1142

Query: 456  SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            ++N+++  YA +    +A EL +++E++       TF ++L+  S  G +  GE +  ++
Sbjct: 1143 TWNSLIFGYANHGYCNEAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKM 1202

Query: 516  I-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
              K   E     Y  ++ +  R   +  A+ + K M  + +   W +++     HG
Sbjct: 1203 QEKYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHG 1258



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 104/437 (23%), Positives = 209/437 (47%), Gaps = 43/437 (9%)

Query: 57   GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
            G  ++A+     M ++G  P+      +LK+C    +   G+ +H+++ ++  E ++ I+
Sbjct: 883  GFYEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYII 942

Query: 117  NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++LI +YSKCG + +A ++F  + +K D+V  ++M+S Y   G   +A+ +  +M + G 
Sbjct: 943  SALIYMYSKCGHVEKACRVFDWIVDK-DLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGV 1001

Query: 177  CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             PN   ++ +I   S   + ++   ++  +   G                          
Sbjct: 1002 KPNVVSWNTLIAGFSQVGDKSMVSEVFRLMTANG-------------------------- 1035

Query: 237  YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
                    E + V WT +I+   Q     +    F +M+  GF P   T+S ++ AC+ +
Sbjct: 1036 -------VEPDVVSWTSVISGFVQNFHNHEGFDAFKEMLDQGFCPSSVTISSLLPACTNV 1088

Query: 297  ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                 GK++H +A+  G+  DV V  +LVDMYAKC   G + +++ +F  M + N ++W 
Sbjct: 1089 ANLRHGKEIHGYAMVIGVEKDVYVRSALVDMYAKC---GYISEAKILFYMMPERNTVTWN 1145

Query: 357  AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            ++I GY   G  + EA++LF+ M +     +H TF +VL AC +     + E ++    +
Sbjct: 1146 SLIFGYANHGYCN-EAIELFNQMEESDTKLDHLTFTAVLNACSHAGMVELGESLFXKMQE 1204

Query: 417  RGRALDDCVGNS-LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SE 471
            + R        + ++ +  R+G++ +A    +++  E +   +  ++ A   + N   +E
Sbjct: 1205 KYRIEPRLEHYACMVDLLGRAGKLSEAYDLIKAMPVEPDKFVWGALLGACRNHGNIELAE 1264

Query: 472  KAFELLHEIEDTGVGTS 488
             A E L E+E    G+S
Sbjct: 1265 VAAEHLFELEPESPGSS 1281



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 135/250 (54%), Gaps = 4/250 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  +KA+    +M + G  P+  T+S++L SC   ++F  G++ H+ + +  +     + 
Sbjct: 294 GDFKKALKQFSMMRESGIEPNEFTFSIVLASCGCVKDFIDGRMFHTQVIKKGMASGVFVG 353

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            ++I +YS  G+++EA K FK MG     VSW+++I+ YV   K   A+  F  M++   
Sbjct: 354 TAIIDMYSGLGEMDEAEKQFKQMGRAASNVSWNALIAGYVLNEKIEKAMEAFCRMVKEDV 413

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
             NE+ +S + +ACS+  ++A    I+  L+K    +S++ V  +LI+ + + GS  LE+
Sbjct: 414 ACNEFTYSNIFKACSSFPSLATTVQIHSRLIKSN-VESNLHVASSLIEAYTQCGS--LEN 470

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VF ++++ + V W  +I   +Q G P  AI L   MI  G  P   T   V+SACS 
Sbjct: 471 AVQVFTQISDADVVSWNSIIKAYSQNGDPWKAIFLLRKMIEEGNKPTSXTFLTVLSACSH 530

Query: 296 LELFTSGKQL 305
             L   G++ 
Sbjct: 531 SGLVQEGQEF 540



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 84/323 (26%), Positives = 154/323 (47%), Gaps = 13/323 (4%)

Query: 410  VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
            ++ H V  G A        L+S Y   G++ +ARK F+ +   N+  +  +  A A+   
Sbjct: 825  LHAHLVIIGLARLTYFAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGF 884

Query: 470  SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             E+A     E++  G+  + +   S+L     +     GE +H  I+K+ FES+  I +A
Sbjct: 885  YEEALSAFSEMQKEGLRPNQFVLPSILKACGHLSDRRTGENMHTVILKNSFESDAYIISA 944

Query: 530  LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            LI MYS+C +VE A +VF  + D++++   +M++G+A+HGF   AL++  KM   G+KPN
Sbjct: 945  LIYMYSKCGHVEKACRVFDWIVDKDLVVMNAMVSGYAQHGFVHEALBLVQKMQQAGVKPN 1004

Query: 590  GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
             +++  +++  S  G  S   + FR M   +G+   +  +  ++    ++    E  +  
Sbjct: 1005 VVSWNTLIAGFSQVGDKSMVSEVFRLM-TANGVEPDVVSWTSVISGFVQNFHNHEGFDAF 1063

Query: 650  RSM------PLSADVLVWRTFLGACRVHGDTELGK--HAAEMILEQDPQDPAAHILLSNL 701
            + M      P S  +    + L AC    +   GK  H   M++  + +D      L ++
Sbjct: 1064 KEMLDQGFCPSSVTI---SSLLPACTNVANLRHGKEIHGYAMVIGVE-KDVYVRSALVDM 1119

Query: 702  YASAGHWEYVANIRKRMKERNLI 724
            YA  G+      +   M ERN +
Sbjct: 1120 YAKCGYISEAKILFYMMPERNTV 1142



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 32/137 (23%), Positives = 65/137 (47%), Gaps = 11/137 (8%)

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +N+++ + F+           +S+ T+A  +   +   A+ +G  +HA ++  G      
Sbjct: 791 RNISTHRTFQ-----------SSSDTYAKAIDMYARDRALYRGRALHAHLVIIGLARLTY 839

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
               L+S Y+ C  +  A ++F ++ + N+  W  +    A+ GF   AL  F +M  +G
Sbjct: 840 FAAKLMSFYTECGQLSNARKLFDKIPNTNIRRWIVLTGACARRGFYEEALSAFSEMQKEG 899

Query: 586 IKPNGITYIAVLSACSH 602
           ++PN     ++L AC H
Sbjct: 900 LRPNQFVLPSILKACGH 916


>gi|356534091|ref|XP_003535591.1| PREDICTED: pentatricopeptide repeat-containing protein At5g52850,
           chloroplastic-like [Glycine max]
          Length = 903

 Score =  468 bits (1204), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 263/798 (32%), Positives = 446/798 (55%), Gaps = 21/798 (2%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+   D+M   G  P+  T S  L+SC     F  G  +H+ + +  LE N V+  +L+
Sbjct: 100 EALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKIHASVVKLGLELNHVLGTTLV 159

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            LY+KC    E +K+   + +  D+VSW++MISS V   K  +A+ ++V+M+E G  PNE
Sbjct: 160 DLYTKCDCTVEPHKLLAFVKDG-DVVSWTTMISSLVETSKWSEALQLYVKMIEAGIYPNE 218

Query: 181 YCFSAVIRACSNTE-NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           + F  ++   S        G +++  L+  G  + ++ +  A+I M+ K    +E A KV
Sbjct: 219 FTFVKLLGMPSFLGLGKGYGKVLHSQLITFG-VEMNLMLKTAIICMYAKCR-RMEDAIKV 276

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
             +  + +   WT +I+   Q    R+A+   +DM LSG LP+ FT + +++A S +   
Sbjct: 277 SQQTPKYDVCLWTSIISGFVQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSL 336

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+Q HS  I  GL  D+ VG +LVDMY KC+   +  +  K F  +   NV+SWT++I
Sbjct: 337 ELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCS--HTTTNGVKAFRGIALPNVISWTSLI 394

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            G+ + G  ++E+V+LF++M    V PN FT +++L AC  +      ++++ + +K   
Sbjct: 395 AGFAEHG-FEEESVQLFAEMQAAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKTQV 453

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
            +D  VGN+L+  YA  G  ++A      +  +++++Y T+     +  + E A  ++  
Sbjct: 454 DIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITH 513

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           + +  V    ++ AS +S A+ +G +  G+Q+H    KSGFE  + + N+L+  YS+C +
Sbjct: 514 MCNDEVKMDEFSLASFISAAAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKCGS 573

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +  A++VFK++ + + +SW  +I+G A +G  + AL  F  M   G+KP+ +T+++++ A
Sbjct: 574 MRDAYRVFKDITEPDRVSWNGLISGLASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFA 633

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CS   L+++G  +F SM   + I  +++HY C+VDLLGR G L EA+  I +MP   D +
Sbjct: 634 CSQGSLLNQGLDYFYSMEKTYHITPKLDHYVCLVDLLGRGGRLEEAMGVIETMPFKPDSV 693

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           +++T L AC +HG+  LG+  A   LE DP DPA ++LL++LY +AG  ++    RK M+
Sbjct: 694 IYKTLLNACNLHGNVPLGEDMARRCLELDPCDPAIYLLLASLYDNAGLPDFGDKTRKLMR 753

Query: 720 ERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
           ER L +     W+E  +K++ F   E       EI  +L+ L  +IK  GY         
Sbjct: 754 ERGLRRSPRQCWMEVKSKIYLFSAREKIGND--EINEKLESLITEIKNRGY--------- 802

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
             +E +   Y   HSE++A+AFG++S     PIR+ KN  +C  CH+ I  ++    REI
Sbjct: 803 PYQESEDKLY---HSEQLALAFGVLSVPTLAPIRINKNSLICTHCHSFIMLLTQFVDREI 859

Query: 840 VLRDSNRFHHIKDGKCSC 857
           ++RD  RFH  KDG+CSC
Sbjct: 860 IVRDRKRFHVFKDGQCSC 877



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 288/529 (54%), Gaps = 9/529 (1%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           L + S   S+    G  VHS + +  L+ +  + N+L+ LY+KC  + +A  +F  M + 
Sbjct: 21  LQVLSLCNSQTLKEGACVHSPIIKVGLQHDLYLSNNLLCLYAKCFGVGQARHLFDEMPH- 79

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD+VSW++++S++       +A+ +F  ML  G CPNE+  S+ +R+CS       G  I
Sbjct: 80  RDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEFEFGAKI 139

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  ++K G  + +  +G  L+D++ K    +E  +K+   + + + V WT MI+   +  
Sbjct: 140 HASVVKLG-LELNHVLGTTLVDLYTKCDCTVE-PHKLLAFVKDGDVVSWTTMISSLVETS 197

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS-GKQLHSWAIRTGLALDVCVG 321
              +A++L++ MI +G  P+ FT   ++   S L L    GK LHS  I  G+ +++ + 
Sbjct: 198 KWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFGVEMNLMLK 257

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +++ MYAKC     ++D+ KV  +   ++V  WT+II+G+VQ+  + +EAV    DM  
Sbjct: 258 TAIICMYAKCR---RMEDAIKVSQQTPKYDVCLWTSIISGFVQN-SQVREAVNALVDMEL 313

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR-SGRME 440
             + PN+FT+AS+L A  ++L   + EQ ++  +  G   D  VGN+L+ MY + S    
Sbjct: 314 SGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCSHTTT 373

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +  KAF  +   N++S+ +++  +A++   E++ +L  E++  GV  +++T +++L   S
Sbjct: 374 NGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTILGACS 433

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            + +I + +++H  IIK+  + +  + NAL+  Y+     + A+ V   M  R++I++T+
Sbjct: 434 KMKSIIQTKKLHGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGMMNHRDIITYTT 493

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           +     + G    AL +   M  D +K +  +  + +SA +  G++  G
Sbjct: 494 LAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISAAAGLGIMETG 542



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 149/506 (29%), Positives = 267/506 (52%), Gaps = 24/506 (4%)

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           E C   V+  C N++ +  G  ++  ++K G    D+ +   L+ ++ K    +  A  +
Sbjct: 18  ETCLQ-VLSLC-NSQTLKEGACVHSPIIKVG-LQHDLYLSNNLLCLYAK-CFGVGQARHL 73

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FD+M  ++ V WT +++  T+     +A++LF  M+ SG  P+ FTLS  + +CS L  F
Sbjct: 74  FDEMPHRDVVSWTTLLSAHTRNKHHFEALQLFDMMLGSGQCPNEFTLSSALRSCSALGEF 133

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G ++H+  ++ GL L+  +G +LVD+Y KC  D +V +  K+   + D +V+SWT +I
Sbjct: 134 EFGAKIHASVVKLGLELNHVLGTTLVDLYTKC--DCTV-EPHKLLAFVKDGDVVSWTTMI 190

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL-LDSNVAEQVYTHAVKRG 418
           +  V++  +  EA++L+  MI+  + PN FTF  +L     L L     + +++  +  G
Sbjct: 191 SSLVET-SKWSEALQLYVKMIEAGIYPNEFTFVKLLGMPSFLGLGKGYGKVLHSQLITFG 249

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
             ++  +  ++I MYA+  RMEDA K  +   + ++  + +++  + +N    +A   L 
Sbjct: 250 VEMNLMLKTAIICMYAKCRRMEDAIKVSQQTPKYDVCLWTSIISGFVQNSQVREAVNALV 309

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++E +G+  + +T+ASLL+ +SS+ ++  GEQ H+R+I  G E +  + NAL+ MY +C+
Sbjct: 310 DMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDIYVGNALVDMYMKCS 369

Query: 539 NVEA-AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
           +      + F+ +   NVISWTS+I GFA+HGF   ++++F +M A G++PN  T   +L
Sbjct: 370 HTTTNGVKAFRGIALPNVISWTSLIAGFAEHGFEEESVQLFAEMQAAGVQPNSFTLSTIL 429

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQR------MEHYACMVDLLGRSGSLTEALEFIRS 651
            ACS    I +  K        HG + +      M     +VD     G   EA   I  
Sbjct: 430 GACSKMKSIIQTKKL-------HGYIIKTQVDIDMAVGNALVDAYAGGGMADEAWSVIGM 482

Query: 652 MPLSADVLVWRTFLGACRVHGDTELG 677
           M    D++ + T        GD E+ 
Sbjct: 483 MN-HRDIITYTTLAARLNQQGDHEMA 507



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 216/419 (51%), Gaps = 22/419 (5%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + + +V++A+  L  M   G  P+  TY+ LL +     +  LG+  HS +    LE + 
Sbjct: 296 VQNSQVREAVNALVDMELSGILPNNFTYASLLNASSSVLSLELGEQFHSRVIMVGLEGDI 355

Query: 114 VILNSLISLYSKCG-DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            + N+L+ +Y KC        K F+ +    +++SW+S+I+ +   G + +++ +F EM 
Sbjct: 356 YVGNALVDMYMKCSHTTTNGVKAFRGIALP-NVISWTSLIAGFAEHGFEEESVQLFAEMQ 414

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN +  S ++ ACS  +++     ++G+++K    D D+ VG AL+D +  G + 
Sbjct: 415 AAGVQPNSFTLSTILGACSKMKSIIQTKKLHGYIIKT-QVDIDMAVGNALVDAYAGGGMA 473

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            + A+ V   M  ++ + +T +  R  Q G    A+R+   M       D F+L+  +SA
Sbjct: 474 -DEAWSVIGMMNHRDIITYTTLAARLNQQGDHEMALRVITHMCNDEVKMDEFSLASFISA 532

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L +  +GKQLH ++ ++G      V  SLV  Y+KC   GS+ D+ +VF  + + + 
Sbjct: 533 AAGLGIMETGKQLHCYSFKSGFERCNSVSNSLVHSYSKC---GSMRDAYRVFKDITEPDR 589

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNV---- 406
           +SW  +I+G + S G   +A+  F DM    V P+  TF S++ AC  G+LL+  +    
Sbjct: 590 VSWNGLISG-LASNGLISDALSAFDDMRLAGVKPDSVTFLSLIFACSQGSLLNQGLDYFY 648

Query: 407 -AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
             E+ Y    K    LD  V   L+ +  R GR+E+A    E++ F+ + V Y T+++A
Sbjct: 649 SMEKTYHITPK----LDHYV--CLVDLLGRGGRLEEAMGVIETMPFKPDSVIYKTLLNA 701


>gi|15234831|ref|NP_194799.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208664|sp|Q9SUH6.1|PP341_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g30700; AltName: Full=Protein DYW9
 gi|5725434|emb|CAB52443.1| putative protein [Arabidopsis thaliana]
 gi|7269971|emb|CAB79788.1| putative protein [Arabidopsis thaliana]
 gi|332660398|gb|AEE85798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 792

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 260/749 (34%), Positives = 419/749 (55%), Gaps = 12/749 (1%)

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE- 173
           +L  L    S  G +  A  IF S+  + D+  ++ ++  +        ++ +F  + + 
Sbjct: 54  LLTKLTQRLSDLGAIYYARDIFLSV-QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKS 112

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
               PN   ++  I A S   +   G +I+G  +  G  DS++ +G  ++ M+ K    +
Sbjct: 113 TDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG-CDSELLLGSNIVKMYFK-FWRV 170

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSA 292
           E A KVFD+M EK+T+ W  MI+   +     ++I++F D+I  S    D  TL  ++ A
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            +EL+    G Q+HS A +TG      V    + +Y+KC   G +     +F      ++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC---GKIKMGSALFREFRKPDI 287

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +++ A+I GY  S G  + ++ LF +++         T  S++   G+L+   +   ++ 
Sbjct: 288 VAYNAMIHGYT-SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHG 343

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + +K        V  +L ++Y++   +E ARK F+   EK+L S+N M+  Y +N  +E 
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  L  E++ +    +  T   +LS  + +GA+  G+ +H  +  + FES+  +  ALI 
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++C ++  A ++F  M  +N ++W +MI+G+  HG    AL IFY+ML  GI P  +T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VL ACSHAGL+ EG + F SM   +G    ++HYACMVD+LGR+G L  AL+FI +M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
            +     VW T LGACR+H DT L +  +E + E DP +   H+LLSN++++  ++   A
Sbjct: 584 SIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAA 643

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R+  K+R L K  G + IE     H F  G+ SHP+  EIY +L++L  K++E GY P
Sbjct: 644 TVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQP 703

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           +T   LH++EEE++   +  HSE++A+AFGLI+T     IR+ KNLRVC DCHT  K IS
Sbjct: 704 ETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLIS 763

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +T R IV+RD+NRFHH KDG CSC DYW
Sbjct: 764 KITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 228/459 (49%), Gaps = 35/459 (7%)

Query: 36  FIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F   P     L N +I  Y  N+  V+      DL+ +     D  T   +L +    + 
Sbjct: 177 FDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQE 236

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
             LG  +HSL T++    +  +L   ISLYSKCG +   + +F+    K DIV++++MI 
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF-RKPDIVAYNAMIH 295

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI-GHI-----IYGFLL 207
            Y + G+   ++ +F E++  G         A +R+ +    V + GH+     I+G+ L
Sbjct: 296 GYTSNGETELSLSLFKELMLSG---------ARLRSSTLVSLVPVSGHLMLIYAIHGYCL 346

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           K  +  S   V  AL  ++ K + ++ESA K+FD+  EK+   W  MI+  TQ G   DA
Sbjct: 347 KSNFL-SHASVSTALTTVYSKLN-EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           I LF +M  S F P+  T++ ++SAC++L   + GK +H     T     + V  +L+ M
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 464

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           YAKC   GS+ ++R++FD M   N ++W  +I+GY    G+ +EA+ +F +M+   + P 
Sbjct: 465 YAKC---GSIAEARRLFDLMTKKNEVTWNTMISGY-GLHGQGQEALNIFYEMLNSGITPT 520

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKA 445
             TF  VL AC +       ++++   + R    +  V +   ++ +  R+G ++ A + 
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHR-YGFEPSVKHYACMVDILGRAGHLQRALQF 579

Query: 446 FESL-FEKNLVSYNTMVDA--YAKNLN-----SEKAFEL 476
            E++  E     + T++ A    K+ N     SEK FEL
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 257/535 (48%), Gaps = 33/535 (6%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  TY+  + +    R+   G+++H        +   ++ ++++ +Y K   + +A K+
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC-------FSAVIR 188
           F  M  K D + W++MIS Y      V++I +F +++      NE C          ++ 
Sbjct: 177 FDRMPEK-DTILWNTMISGYRKNEMYVESIQVFRDLI------NESCTRLDTTTLLDILP 229

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A +  + + +G  I+    K G +  D  V    I ++ K G + + SA  +F +  + +
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDY-VLTGFISLYSKCGKIKMGSA--LFREFRKPD 286

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V +  MI   T  G    ++ LF +++LSG      TL  +V     L L  +   +H 
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHG 343

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           + +++       V  +L  +Y+K      ++ +RK+FD   + ++ SW A+I+GY Q+ G
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKL---NEIESARKLFDESPEKSLPSWNAMISGYTQN-G 399

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--V 425
             ++A+ LF +M + + +PN  T   +L AC  L   ++ + V  H + R    +    V
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV--HDLVRSTDFESSIYV 457

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
             +LI MYA+ G + +AR+ F+ + +KN V++NTM+  Y  +   ++A  + +E+ ++G+
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAF 544
             +  TF  +L   S  G + +G++I   +I + GFE +   Y  ++ +  R  +++ A 
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577

Query: 545 QVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           Q  + M  +     W +++     H     A  +  K+    + P+ + Y  +LS
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 4/237 (1%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           S+ N   S+   F   P  S P  N +I  +  +G  + AI     M +    P+  T +
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            +L +C +     LGK VH L+  +  E +  +  +LI +Y+KCG + EA ++F  M  K
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TK 483

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           ++ V+W++MIS Y   G+  +A+++F EML  G  P    F  V+ ACS+   V  G  I
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           +  ++    F+  V     ++D+  +    L+ A +  + M+ E  +  W  ++  C
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAG-HLQRALQFIEAMSIEPGSSVWETLLGAC 599


>gi|242079983|ref|XP_002444760.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
 gi|241941110|gb|EES14255.1| hypothetical protein SORBIDRAFT_07g027560 [Sorghum bicolor]
          Length = 650

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 234/549 (42%), Positives = 334/549 (60%), Gaps = 8/549 (1%)

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G    + V  SLV MYAK    G +DD+ ++FDRM + NV++WT ++     + GR +EA
Sbjct: 110 GAGGGIFVSNSLVSMYAKF---GLLDDALRLFDRMPERNVVTWTTVVAALANADGRKEEA 166

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           ++    M +  VAPN +TF+SVL ACG      V   ++   VK G   D  V +SLI  
Sbjct: 167 LRFLVAMWRDGVAPNAYTFSSVLGACGT---PGVLAALHASTVKVGLDSDVFVRSSLIDA 223

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y + G ++  R+ F+ +  ++LV +N+++  +A++ +   A EL   ++D G   +  T 
Sbjct: 224 YMKLGDLDGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTL 283

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S+L   + +  +  G Q+HA ++K  +E +  ++NAL+ MY +C ++E A  +F  M  
Sbjct: 284 TSVLRACTGMVMLEAGRQVHAHVLK--YERDLILHNALLDMYCKCGSLEDAEALFHRMPQ 341

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           R+VISW++MI+G A++G +A AL +F  M ++G+ PN IT + VL ACSHAGL+ +GW +
Sbjct: 342 RDVISWSTMISGLAQNGKSAEALRVFDLMKSEGVAPNRITMVGVLFACSHAGLVEDGWYY 401

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           FRSM    GI    EH+ CMVDLLGR+G L EA+EFIR M L  D ++WRT LGACR+H 
Sbjct: 402 FRSMKKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHK 461

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
              L  +AA  IL+ +P D  A +LLSN YA    W       K M++R + KE G SWI
Sbjct: 462 SGNLAAYAAREILKLEPDDQGARVLLSNTYADLRQWTDAEKSWKAMRDRGMKKEPGRSWI 521

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E +  VH F  G+ SHP +  I  EL++L  +I   GY+P T FVL +L  EQK   L  
Sbjct: 522 ELEKHVHVFIAGDLSHPCSDTIVQELNRLIGRISALGYVPQTEFVLQDLAIEQKEDLLKY 581

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSEK+A+AFG +     KPIR+ KNLR+CGDCH   K +S   GR I++RD  RFHH +D
Sbjct: 582 HSEKMAIAFGTMHAVGGKPIRIMKNLRICGDCHAFAKLVSKSEGRMIIIRDPVRFHHFQD 641

Query: 853 GKCSCNDYW 861
           G CSC DYW
Sbjct: 642 GACSCGDYW 650



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 146/497 (29%), Positives = 257/497 (51%), Gaps = 39/497 (7%)

Query: 9   PAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLS--NRLIYHLNDGRVQKAIFTL 66
           P ++   S FK    +R      SS P   QP     L+  +RL     +G    A+  L
Sbjct: 4   PIRVLMKSLFKRPPRNRLAATRRSSRPVHTQPPPHPSLAIFSRLCV---EGPFPAALALL 60

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS-LLTRSKLEPNS-------VILNS 118
             +   G   D  + + L+K C+R      G+L+H  +    +L   S        + NS
Sbjct: 61  PDLAAAGLRADPVSLTRLVKLCVRHGTAGDGRLIHRHVEAHGQLSHYSGGAGGGIFVSNS 120

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR-GKQVDAIHMFVEMLELGFC 177
           L+S+Y+K G L++A ++F  M  +R++V+W++++++  N  G++ +A+   V M   G  
Sbjct: 121 LVSMYAKFGLLDDALRLFDRM-PERNVVTWTTVVAALANADGRKEEALRFLVAMWRDGVA 179

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           PN Y FS+V+ AC     +A    ++   +K G  DSDV V  +LID ++K   DL+   
Sbjct: 180 PNAYTFSSVLGACGTPGVLAA---LHASTVKVG-LDSDVFVRSSLIDAYMKLG-DLDGGR 234

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +VFD+M  ++ V W  +I    Q G    AI LF+ M  +GF  ++ TL+ V+ AC+ + 
Sbjct: 235 RVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSANQGTLTSVLRACTGMV 294

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           +  +G+Q+H+  ++     D+ +  +L+DMY KC   GS++D+  +F RM   +V+SW+ 
Sbjct: 295 MLEAGRQVHAHVLK--YERDLILHNALLDMYCKC---GSLEDAEALFHRMPQRDVISWST 349

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ--VYTHAV 415
           +I+G  Q+ G+  EA+++F  M    VAPN  T   VL AC +   + + E    Y  ++
Sbjct: 350 MISGLAQN-GKSAEALRVFDLMKSEGVAPNRITMVGVLFACSH---AGLVEDGWYYFRSM 405

Query: 416 KR--GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA----YAKNL 468
           K+  G   +    N ++ +  R+G++++A +    +  E + V + T++ A     + NL
Sbjct: 406 KKLFGIQPEREHHNCMVDLLGRAGKLDEAVEFIRDMNLEPDAVIWRTLLGACRMHKSGNL 465

Query: 469 NSEKAFELLH-EIEDTG 484
            +  A E+L  E +D G
Sbjct: 466 AAYAAREILKLEPDDQG 482


>gi|359496846|ref|XP_002272372.2| PREDICTED: uncharacterized protein LOC100258406 [Vitis vinifera]
          Length = 1286

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 242/588 (41%), Positives = 369/588 (62%), Gaps = 15/588 (2%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD--VCVGCSLVDMY 328
           LD+I  G L PD    S ++  C+ L     G+ +H+  + +   LD  + +   +V+MY
Sbjct: 75  LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMY 133

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           AKC   G +DD+R++FD M   ++++WTA+I G+ Q+  R ++A+ LF  M++    PNH
Sbjct: 134 AKC---GCLDDARRMFDEMPTKDMVTWTALIAGFSQNN-RPRDALLLFPQMLRLGFQPNH 189

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           FT +S+LKA G+    +   Q++   +K G      VG++L+ MYAR G M+ A+ AF+ 
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           +  K+ VS+N ++  +A+    E A  LL +++      + +T++S+LS  +SIGA+ +G
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG 309

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           + +HA +IKSG +    I N L+ MY++  +++ A +VF  +   +V+SW +M+TG A+H
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G     L+ F +ML  GI+PN I+++ VL+ACSH+GL+ EG  +F  M  ++ +   + H
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPH 428

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y   VDLLGR G L  A  FIR MP+     VW   LGACR+H + ELG +AAE   E D
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P D    +LLSN+YASAG W  VA +RK MKE  + K+  CSW+E +N VH F   + +H
Sbjct: 489 PHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETH 548

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVL---HELEEEQKVQYLFQHSEKIAVAFGLIS 805
           P+  EI  + ++++ KIKE GY+PDT+ VL    + E E+K+QY   HSEK+A+AF L++
Sbjct: 549 PRIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQY---HSEKLALAFALLN 605

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           T    PIR+ KN+RVCGDCH AIK++S V  REI++RD+NRFH  +DG
Sbjct: 606 TPTGSPIRIKKNIRVCGDCHAAIKFVSKVVDREIIVRDTNRFHRFRDG 653



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 140/428 (32%), Positives = 232/428 (54%), Gaps = 24/428 (5%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLI 120
            ++ LDL+ +    PD + YS LLK C R      G++VH+ L  S    N ++L N ++
Sbjct: 71  GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           ++Y+KCG L++A ++F  M  K D+V+W+++I+ +    +  DA+ +F +ML LGF PN 
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNH 189

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKV 239
           +  S++++A  +   +  G  ++ F LK GY  S V VG AL+DM+ + G +D  +A   
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGY-QSSVYVGSALVDMYARCGHMD--AAQLA 246

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FD M  K+ V W  +I+   + G    A+ L   M    F P  FT S V+SAC+ +   
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGAL 306

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GK +H+  I++GL L   +G +L+DMYAK    GS+DD+++VFDR++  +V+SW  ++
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA---GSIDDAKRVFDRLVKPDVVSWNTML 363

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKR 417
           TG  Q  G  KE +  F  M++  + PN  +F  VL AC +  LLD  +    Y   +K+
Sbjct: 364 TGCAQH-GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL---YYFELMKK 419

Query: 418 GRALDDCVGN-SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN---- 469
            +   D     + + +  R G ++ A +    +  E     +  ++ A    KN+     
Sbjct: 420 YKVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVY 479

Query: 470 -SEKAFEL 476
            +E+AFEL
Sbjct: 480 AAERAFEL 487



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 110/383 (28%), Positives = 206/383 (53%), Gaps = 6/383 (1%)

Query: 169 VEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           +++++ G   P+   +S +++ C+    V  G I++  L+   + D+ + +   +++M+ 
Sbjct: 75  LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K    L+ A ++FD+M  K+ V WT +I   +Q   PRDA+ LF  M+  GF P+ FTLS
Sbjct: 135 KCGC-LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGFQPNHFTLS 193

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            ++ A         G QLH++ ++ G    V VG +LVDMYA+C   G +D ++  FD M
Sbjct: 194 SLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC---GHMDAAQLAFDGM 250

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              + +SW A+I+G+ +  G  + A+ L   M +    P HFT++SVL AC ++      
Sbjct: 251 PTKSEVSWNALISGHARK-GEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGALEQG 309

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           + V+ H +K G  L   +GN+L+ MYA++G ++DA++ F+ L + ++VS+NTM+   A++
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              ++  +   ++   G+  +  +F  +L+  S  G + +G      + K   E +   Y
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHY 429

Query: 528 NALISMYSRCANVEAAFQVFKEM 550
              + +  R   ++ A +  +EM
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREM 452



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 66/225 (29%), Positives = 111/225 (49%), Gaps = 5/225 (2%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   PT SE   N LI  H   G  + A+  L  M +K   P   TYS +L +C      
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVLSACASIGAL 306

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             GK VH+ + +S L+  + I N+L+ +Y+K G +++A ++F  +  K D+VSW++M++ 
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLV-KPDVVSWNTMLTG 365

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
               G   + +  F +ML +G  PNE  F  V+ ACS++  +  G + Y  L+K    + 
Sbjct: 366 CAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG-LYYFELMKKYKVEP 424

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           DV      +D+  +  + L+ A +   +M  E     W  ++  C
Sbjct: 425 DVPHYVTFVDLLGRVGL-LDRAERFIREMPIEPTAAVWGALLGAC 468


>gi|347954522|gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 249/661 (37%), Positives = 387/661 (58%), Gaps = 35/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF+ + E N + W  M         P  A+ L++ MI  G LP+ +T   ++ +
Sbjct: 53  LPYAISVFETIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKS 112

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ + F  G+Q+H   ++ G  LD+ V  SL+ MY +   +G ++D+RKVFD+    +V
Sbjct: 113 CAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLISMYVQ---NGRLEDARKVFDQSSHRDV 169

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
           +S+TA+ITGY   G                              G +KEA++LF +M++ 
Sbjct: 170 VSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKT 229

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V P+  T  SV+ AC       +  QV++     G   +  + N+LI +Y + G +E A
Sbjct: 230 NVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETA 289

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              FE L  K+++S+NT++  Y      ++A  L  E+  +G   +  T  S+L   + +
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHL 349

Query: 503 GAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           GAI  G  IH  I K   G  +      +LI MY++C ++EAA QVF  + +R++ SW +
Sbjct: 350 GAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWNA 409

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI GFA HG A  A +IF +M  + I+P+ IT++ +LSACSH+G++  G   FRSM +++
Sbjct: 410 MIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIFRSMKEDY 469

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I  ++EHY CM+DLLG SG   EA E I +M +  D ++W + L AC+++ + ELG+  
Sbjct: 470 KITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMYANVELGESY 529

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +++ +P++P +++LLSN+YA+AG W  VA IR  + ++ + K  GCS IE D+ VH+
Sbjct: 530 AQNLIKIEPKNPGSYVLLSNIYATAGRWNEVAKIRALLNDKGMKKVPGCSSIEIDSVVHE 589

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F +G+  HP+  EIY  L+++ + ++E G++PDT+ VL E+EEE K   L  HSEK+A+A
Sbjct: 590 FIIGDKFHPRNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 649

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLIST     + + KNLRVC +CH A K IS +  REI+ RD  RFHH +DG CSCNDY
Sbjct: 650 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 709

Query: 861 W 861
           W
Sbjct: 710 W 710



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 142/528 (26%), Positives = 260/528 (49%), Gaps = 54/528 (10%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS---LYSKCGDLN 130
           NHP L     LL +C   +     +++H+ + ++ L   +  L+ LI    L      L 
Sbjct: 2   NHPSLS----LLHNC---KTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLP 54

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
            A  +F+++  + +++ W++M   +      V A++++V M+ LG  PN Y F  ++++C
Sbjct: 55  YAISVFETI-QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLLPNCYTFPFLLKSC 113

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD----------------- 232
           + ++    G  I+G +LK GY D D+ V  +LI M+V+ G ++                 
Sbjct: 114 AKSKAFREGQQIHGHVLKLGY-DLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSY 172

Query: 233 ------------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
                       + SA K+FD++  K+ V W  MI+   + G  ++A+ LF +M+ +   
Sbjct: 173 TALITGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVR 232

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD  T+  VVSAC++      G+Q+HSW    G   ++ +  +L+D+Y KC   G V+ +
Sbjct: 233 PDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC---GEVETA 289

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             +F+ +   +V+SW  +I GY       KEA+ LF +M++   +PN  T  S+L AC +
Sbjct: 290 CGLFEGLSYKDVISWNTLIGGYTHM-NLYKEALLLFQEMLRSGESPNDVTMLSILPACAH 348

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESLFEKNLVSYN 458
           L    +   ++ +  KR + + +   +  SLI MYA+ G +E A++ F+S+  ++L S+N
Sbjct: 349 LGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCGDIEAAQQVFDSILNRSLSSWN 408

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  +A +  +  AF++   +    +     TF  LLS  S  G +  G  I  R +K 
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSHSGMLDLGRHIF-RSMKE 467

Query: 519 GFESNHCI--YNALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMI 562
            ++    +  Y  +I +       + A ++    EME   VI W S++
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI-WCSLL 514



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 194/409 (47%), Gaps = 40/409 (9%)

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD---SRKVFDRMLDHNVMSW 355
             S + +H+  I+TGL        +L  +   C +    D    +  VF+ + + N++ W
Sbjct: 15  LQSLRMIHAQMIKTGLH---NTNYALSKLIEFCVLSPHFDGLPYAISVFETIQEPNLLIW 71

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
             +  G+  S      A+ L+  MI   + PN +TF  +LK+C         +Q++ H +
Sbjct: 72  NTMFRGHALSSD-PVSALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVL 130

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAF---------------------------ES 448
           K G  LD  V  SLISMY ++GR+EDARK F                           + 
Sbjct: 131 KLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQK 190

Query: 449 LFE----KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
           +F+    K++VS+N M+  YA+  N+++A EL  E+  T V     T  S++S  +   +
Sbjct: 191 MFDEIPIKDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSAS 250

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           I  G Q+H+ I   GF SN  I NALI +Y +C  VE A  +F+ +  ++VISW ++I G
Sbjct: 251 IELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKDVISWNTLIGG 310

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIV 623
           +        AL +F +ML  G  PN +T +++L AC+H G I  G W H        G+ 
Sbjct: 311 YTHMNLYKEALLLFQEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVA 370

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
               H   ++D+  + G +  A +   S+ L+  +  W   +    +HG
Sbjct: 371 NASSHRTSLIDMYAKCGDIEAAQQVFDSI-LNRSLSSWNAMIFGFAMHG 418



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 103/371 (27%), Positives = 194/371 (52%), Gaps = 38/371 (10%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A++    M   G  P+  T+  LLKSC +S+ F  G+ +H  + +   + +  +  SLIS
Sbjct: 87  ALYLYVCMISLGLLPNCYTFPFLLKSCAKSKAFREGQQIHGHVLKLGYDLDLYVHTSLIS 146

Query: 122 LYSKCGDLNEANKIFKSMGNK------------------------------RDIVSWSSM 151
           +Y + G L +A K+F    ++                              +D+VSW++M
Sbjct: 147 MYVQNGRLEDARKVFDQSSHRDVVSYTALITGYASKGYIASAQKMFDEIPIKDVVSWNAM 206

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           IS Y   G   +A+ +F EM++    P+E    +V+ AC+ + ++ +G  ++ ++   G 
Sbjct: 207 ISGYAETGNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHG- 265

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F S++ +  ALID+++K   ++E+A  +F+ ++ K+ + W  +I   T +   ++A+ LF
Sbjct: 266 FGSNLKIVNALIDLYIKCG-EVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYA 329
            +M+ SG  P+  T+  ++ AC+ L     G+ +H +  +   G+A       SL+DMYA
Sbjct: 325 QEMLRSGESPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYA 384

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           KC   G ++ +++VFD +L+ ++ SW A+I G+    GR   A  +FS M + ++ P+  
Sbjct: 385 KC---GDIEAAQQVFDSILNRSLSSWNAMIFGFAMH-GRANAAFDIFSRMRKNEIEPDDI 440

Query: 390 TFASVLKACGN 400
           TF  +L AC +
Sbjct: 441 TFVGLLSACSH 451



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/250 (28%), Positives = 126/250 (50%), Gaps = 3/250 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M +    PD  T   ++ +C +S +  LG+ VHS +       N  I+
Sbjct: 214 GNNKEALELFKEMMKTNVRPDESTMVSVVSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LY KCG++  A  +F+ +  K D++SW+++I  Y +     +A+ +F EML  G 
Sbjct: 274 NALIDLYIKCGEVETACGLFEGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 332

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG-CALIDMFVKGSVDLES 235
            PN+    +++ AC++   + IG  I+ ++ K     ++      +LIDM+ K   D+E+
Sbjct: 333 SPNDVTMLSILPACAHLGAIEIGRWIHVYINKRLKGVANASSHRTSLIDMYAKCG-DIEA 391

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD +  ++   W  MI      G    A  +F  M  +   PD  T  G++SACS 
Sbjct: 392 AQQVFDSILNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNEIEPDDITFVGLLSACSH 451

Query: 296 LELFTSGKQL 305
             +   G+ +
Sbjct: 452 SGMLDLGRHI 461


>gi|297736528|emb|CBI25399.3| unnamed protein product [Vitis vinifera]
          Length = 846

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 251/689 (36%), Positives = 404/689 (58%), Gaps = 14/689 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--VILNSLISLYSKCGDLNEANKIFKSMGN 141
           +L+ C    +    K VH L+ +S  E     V+ N    +YSKC +   A  +F  M  
Sbjct: 70  VLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDEM-P 128

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R++ SW+ MI      G   D    F EML  G  P+++ +SA+I++C   +++ +G +
Sbjct: 129 QRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLELGKM 188

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++  ++  G F + + V  +L++M+ K GS+  E +Y VF+ MTE N V W  MI+ CT 
Sbjct: 189 VHAQIVMRG-FATHIFVSTSLLNMYAKLGSI--EDSYWVFNMMTEHNQVSWNAMISGCTS 245

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G   +A  LF+ M      P+ +TL  V  A  +L     GK++ + A   G+  +V V
Sbjct: 246 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 305

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFD-RMLDHNVMS-WTAIITGYVQSGGRDKEAVKLFSD 378
           G +L+DMY+KC   GS+ D+R VFD   ++  V + W A+I+GY QSG   +EA++L+  
Sbjct: 306 GTALIDMYSKC---GSLHDARSVFDTNFINCGVNTPWNAMISGYSQSGC-SQEALELYVQ 361

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSG 437
           M Q  +  + +T+ SV  A            V+   +K G  L    V N++   Y++ G
Sbjct: 362 MCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSVNNAIADAYSKCG 421

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            +ED RK F+ + E+++VS+ T+V AY+++   E+A      + + G   + +TF+S+L 
Sbjct: 422 FLEDVRKVFDRMEERDIVSWTTLVTAYSQSSLGEEALATFCLMREEGFAPNQFTFSSVLI 481

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             +S+  +  G Q+H  + K+G ++  CI +ALI MY++C ++  A +VF ++ + +++S
Sbjct: 482 SCASLCFLEYGRQVHGLLCKAGLDTEKCIESALIDMYAKCGSITEAGKVFDKISNPDIVS 541

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           WT++I+G+A+HG    AL++F +M   GIK N +T + VL ACSH G++ EG  +F+ M 
Sbjct: 542 WTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACSHGGMVEEGLFYFQQME 601

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           D +G+V  MEHYAC++DLLGR G L +A+EFIR MP+  + +VW+T LG CRVHG+ ELG
Sbjct: 602 DGYGVVPEMEHYACIIDLLGRVGRLDDAMEFIRKMPMEPNEMVWQTLLGGCRVHGNVELG 661

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           + AA  IL   P+  A ++LLSN Y   G +E   ++R  MK++ + KE G SWI    +
Sbjct: 662 EIAARKILSIRPEYSATYVLLSNTYIETGSYEDGLSLRNVMKDQGVKKEPGYSWISVKGR 721

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIK 766
           VHKF+ G+  HP+  EIY +L++L  KIK
Sbjct: 722 VHKFYSGDQQHPQKKEIYVKLEELREKIK 750



 Score =  229 bits (584), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 155/510 (30%), Positives = 264/510 (51%), Gaps = 20/510 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD   YS +++SCI   +  LGK+VH+ +       +  +  SL+++Y+K G 
Sbjct: 158 MLNSGILPDKFAYSAIIQSCIGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGS 217

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + ++  +F  M  + + VSW++MIS   + G  ++A  +FV M      PN Y   +V +
Sbjct: 218 IEDSYWVFNMM-TEHNQVSWNAMISGCTSNGLHLEAFDLFVRMKNGACTPNMYTLVSVSK 276

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A     +V +G  +     + G  + +V VG ALIDM+ K GS  L  A  VFD      
Sbjct: 277 AVGKLVDVNMGKEVQNCASELG-IEGNVLVGTALIDMYSKCGS--LHDARSVFDTNFINC 333

Query: 248 TVG--WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            V   W  MI+  +Q GC ++A+ L++ M  +G   D +T   V +A +  +    G+ +
Sbjct: 334 GVNTPWNAMISGYSQSGCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVV 393

Query: 306 HSWAIRTGLALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           H   ++ GL L V  V  ++ D Y+KC   G ++D RKVFDRM + +++SWT ++T Y Q
Sbjct: 394 HGMVLKCGLDLMVVSVNNAIADAYSKC---GFLEDVRKVFDRMEERDIVSWTTLVTAYSQ 450

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           S    +EA+  F  M +   APN FTF+SVL +C +L       QV+    K G   + C
Sbjct: 451 S-SLGEEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKC 509

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           + ++LI MYA+ G + +A K F+ +   ++VS+  ++  YA++   E A +L   +E +G
Sbjct: 510 IESALIDMYAKCGSITEAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSG 569

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----ESNHCIYNALISMYSRCANV 540
           +  +A T   +L   S  G + +G   + + ++ G+    E  H  Y  +I +  R   +
Sbjct: 570 IKANAVTLLCVLFACSHGGMVEEG-LFYFQQMEDGYGVVPEMEH--YACIIDLLGRVGRL 626

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHG 569
           + A +  ++M  + N + W +++ G   HG
Sbjct: 627 DDAMEFIRKMPMEPNEMVWQTLLGGCRVHG 656



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/313 (31%), Positives = 166/313 (53%), Gaps = 19/313 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  Q+A+     M Q G   DL TY  +  +   S++   G++VH ++ +  L+   V +
Sbjct: 350 GCSQEALELYVQMCQNGITSDLYTYCSVFNAIAASKSLQFGRVVHGMVLKCGLDLMVVSV 409

Query: 117 NSLIS-LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
           N+ I+  YSKCG L +  K+F  M  +RDIVSW++++++Y       +A+  F  M E G
Sbjct: 410 NNAIADAYSKCGFLEDVRKVFDRM-EERDIVSWTTLVTAYSQSSLGEEALATFCLMREEG 468

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
           F PN++ FS+V+ +C++   +  G  ++G L K G  D++ C+  ALIDM+ K GS+   
Sbjct: 469 FAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAG-LDTEKCIESALIDMYAKCGSIT-- 525

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A KVFDK++  + V WT +I+   Q G   DA++LF  M LSG   +  TL  V+ ACS
Sbjct: 526 EAGKVFDKISNPDIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKANAVTLLCVLFACS 585

Query: 295 -----ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-L 348
                E  LF   +    + +   +    C+    +D+  +    G +DD+ +   +M +
Sbjct: 586 HGGMVEEGLFYFQQMEDGYGVVPEMEHYACI----IDLLGRV---GRLDDAMEFIRKMPM 638

Query: 349 DHNVMSWTAIITG 361
           + N M W  ++ G
Sbjct: 639 EPNEMVWQTLLGG 651



 Score =  128 bits (322), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 181/412 (43%), Gaps = 76/412 (18%)

Query: 324 LVDMYAKCTVDGSVDDSRK-------------------------------------VFDR 346
           L+D+   C   GS+ +++                                      VFD 
Sbjct: 67  LIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKCSEFRAACGVFDE 126

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   NV SWT +I G  +  G   +  K F +M+   + P+ F +++++++C  L    +
Sbjct: 127 MPQRNVFSWTVMIVGSTEH-GLFFDGFKFFCEMLNSGILPDKFAYSAIIQSCIGLDSLEL 185

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + V+   V RG A    V  SL++MYA+ G +ED+   F  + E N VS+N M+     
Sbjct: 186 GKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSYWVFNMMTEHNQVSWNAMISGCTS 245

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N    +AF+L   +++     + YT  S+      +  +  G+++     + G E N  +
Sbjct: 246 NGLHLEAFDLFVRMKNGACTPNMYTLVSVSKAVGKLVDVNMGKEVQNCASELGIEGNVLV 305

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVIS------WTSMITGFAKHGFAARALEIFYK 580
             ALI MYS+C ++  A  VF    D N I+      W +MI+G+++ G +  ALE++ +
Sbjct: 306 GTALIDMYSKCGSLHDARSVF----DTNFINCGVNTPWNAMISGYSQSGCSQEALELYVQ 361

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL---- 636
           M  +GI  +  TY +V +A + +  +  G    R +   HG+V +     C +DL+    
Sbjct: 362 MCQNGITSDLYTYCSVFNAIAASKSLQFG----RVV---HGMVLK-----CGLDLMVVSV 409

Query: 637 --------GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
                    + G L +  +    M    D++ W T + A   +  + LG+ A
Sbjct: 410 NNAIADAYSKCGFLEDVRKVFDRME-ERDIVSWTTLVTA---YSQSSLGEEA 457



 Score = 86.3 bits (212), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 66/206 (32%), Positives = 103/206 (50%), Gaps = 15/206 (7%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++A+ T  LM ++G  P+  T+S +L SC        G+ VH LL ++ L+    I ++L
Sbjct: 455 EEALATFCLMREEGFAPNQFTFSSVLISCASLCFLEYGRQVHGLLCKAGLDTEKCIESAL 514

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I +Y+KCG + EA K+F  + N  DIVSW+++IS Y   G   DA+ +F  M   G   N
Sbjct: 515 IDMYAKCGSITEAGKVFDKISNP-DIVSWTAIISGYAQHGLVEDALQLFRRMELSGIKAN 573

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-----FDSDVCVGCALIDMFVKGSVD-L 233
                 V+ ACS+   V  G + Y   ++ GY      +   C+    ID+   G V  L
Sbjct: 574 AVTLLCVLFACSHGGMVEEG-LFYFQQMEDGYGVVPEMEHYACI----IDLL--GRVGRL 626

Query: 234 ESAYKVFDKM-TEKNTVGWTLMITRC 258
           + A +   KM  E N + W  ++  C
Sbjct: 627 DDAMEFIRKMPMEPNEMVWQTLLGGC 652



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/196 (27%), Positives = 91/196 (46%), Gaps = 6/196 (3%)

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH--CIYNALISMYSRC 537
           I +T   T       +L   +  G+I + + +H  ++KS FE      ++N    +YS+C
Sbjct: 55  ISETYQQTQVQDLIDVLRDCAEKGSIREAKAVHGLVLKSNFEDKDLMVLFNHAAHVYSKC 114

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
           +   AA  VF EM  RNV SWT MI G  +HG      + F +ML  GI P+   Y A++
Sbjct: 115 SEFRAACGVFDEMPQRNVFSWTVMIVGSTEHGLFFDGFKFFCEMLNSGILPDKFAYSAII 174

Query: 598 SACSHAGLIS-EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
            +C   GL S E  K   +     G    +     ++++  + GS+ ++  ++ +M    
Sbjct: 175 QSC--IGLDSLELGKMVHAQIVMRGFATHIFVSTSLLNMYAKLGSIEDSY-WVFNMMTEH 231

Query: 657 DVLVWRTFLGACRVHG 672
           + + W   +  C  +G
Sbjct: 232 NQVSWNAMISGCTSNG 247


>gi|297741272|emb|CBI32403.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 241/624 (38%), Positives = 366/624 (58%), Gaps = 41/624 (6%)

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELEL 298
           FD++ +K+   W  MI+     G   +AI  F  ++L S   PD +T   V+ AC  L  
Sbjct: 74  FDQIPQKDVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACGTL-- 131

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G+++H WA + G   +V V  SL+ MY++    G    +R +FD M   ++ SW A+
Sbjct: 132 -VDGRKIHCWAFKLGFQWNVFVAASLIHMYSRFGFTGI---ARSLFDDMPFRDMGSWNAM 187

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I+G +Q+G    +A+ +  +M    +  N  T  S+L                       
Sbjct: 188 ISGLIQNGNA-AQALDVLDEMRLEGIKMNFVTVVSILPV--------------------- 225

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
                      + MYA+ G ++ A K FE +  K+++S+NT++  YA+N  + +A E+  
Sbjct: 226 ----------FVDMYAKLGLLDSAHKVFEIIPVKDVISWNTLITGYAQNGLASEAIEVYK 275

Query: 479 EIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            +E+   +  +  T+ S+L   + +GA+ +G +IH R+IK+    +  +   LI +Y +C
Sbjct: 276 MMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCLIDVYGKC 335

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             +  A  +F ++   + ++W ++I+    HG A + L++F +ML +G+KP+ +T++++L
Sbjct: 336 GRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDHVTFVSLL 395

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           SACSH+G + EG   FR M  E+GI   ++HY CMVDLLGR+G L  A +FI+ MPL  D
Sbjct: 396 SACSHSGFVEEGKWCFRLM-QEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKDMPLQPD 454

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
             +W   LGACR+HG+ ELGK A++ + E D ++   ++LLSN+YA+ G WE V  +R  
Sbjct: 455 ASIWGALLGACRIHGNIELGKFASDRLFEVDSKNVGYYVLLSNIYANVGKWEGVDKVRSL 514

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
            +ER L K  G S IE + KV  F+ G  SHPK  EIY EL  L  K+K  GY+PD +FV
Sbjct: 515 ARERGLKKTPGWSTIEVNRKVDVFYTGNQSHPKCKEIYEELRVLTAKMKSLGYIPDYSFV 574

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
           L ++EE++K   L  HSE++A+AFG+IST    PIR+FKNLRVCGDCH A K+IS +T R
Sbjct: 575 LQDVEEDEKEHILTSHSERLAIAFGIISTPPKSPIRIFKNLRVCGDCHNATKFISRITQR 634

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           EIV+RDSNRFHH KDG CSC DYW
Sbjct: 635 EIVVRDSNRFHHFKDGICSCGDYW 658



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 133/501 (26%), Positives = 236/501 (47%), Gaps = 49/501 (9%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           GN  +   ++ L  S  ++      K +H+LL  +    +  I   L++LY+  GD++ +
Sbjct: 14  GNQNEEIDFNFLFDSSTKTP---FAKCLHALLVVAGKVQSIFISTRLVNLYANLGDVSLS 70

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACS 191
              F  +  K D+ +W+SMIS+YV+ G   +AI  F ++L +    P+ Y F  V++AC 
Sbjct: 71  RCTFDQIPQK-DVYAWNSMISAYVHNGHFHEAIGCFYQLLLVSEIRPDFYTFPPVLKACG 129

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVG 250
              +   G  I+ +  K G F  +V V  +LI M+ + G   +  A  +FD M  ++   
Sbjct: 130 TLVD---GRKIHCWAFKLG-FQWNVFVAASLIHMYSRFGFTGI--ARSLFDDMPFRDMGS 183

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  MI+   Q G    A+ +  +M L G   +       V+  S L +F           
Sbjct: 184 WNAMISGLIQNGNAAQALDVLDEMRLEGIKMN------FVTVVSILPVF----------- 226

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
                         VDMYAK    G +D + KVF+ +   +V+SW  +ITGY Q+G    
Sbjct: 227 --------------VDMYAKL---GLLDSAHKVFEIIPVKDVISWNTLITGYAQNG-LAS 268

Query: 371 EAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           EA++++  M +  ++ PN  T+ S+L A  ++       +++   +K    LD  V   L
Sbjct: 269 EAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQGMKIHGRVIKTNLHLDVFVATCL 328

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I +Y + GR+ DA   F  + +++ V++N ++  +  + ++EK  +L  E+ D GV    
Sbjct: 329 IDVYGKCGRLVDAMSLFYQVPQESSVTWNAIISCHGIHGHAEKTLKLFGEMLDEGVKPDH 388

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            TF SLLS  S  G + +G+     + + G + +   Y  ++ +  R   +E A+   K+
Sbjct: 389 VTFVSLLSACSHSGFVEEGKWCFRLMQEYGIKPSLKHYGCMVDLLGRAGYLEMAYDFIKD 448

Query: 550 MEDRNVIS-WTSMITGFAKHG 569
           M  +   S W +++     HG
Sbjct: 449 MPLQPDASIWGALLGACRIHG 469



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 136/312 (43%), Gaps = 39/312 (12%)

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           V  G+     +   L+++YA  G +  +R  F+ + +K++ ++N+M+ AY  N +  +A 
Sbjct: 43  VVAGKVQSIFISTRLVNLYANLGDVSLSRCTFDQIPQKDVYAWNSMISAYVHNGHFHEAI 102

Query: 475 ELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
              +++     +    YTF  +L      G +  G +IH    K GF+ N  +  +LI M
Sbjct: 103 GCFYQLLLVSEIRPDFYTFPPVLKAC---GTLVDGRKIHCWAFKLGFQWNVFVAASLIHM 159

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           YSR      A  +F +M  R++ SW +MI+G  ++G AA+AL++  +M  +GIK N +T 
Sbjct: 160 YSRFGFTGIARSLFDDMPFRDMGSWNAMISGLIQNGNAAQALDVLDEMRLEGIKMNFVTV 219

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           +++L                                   VD+  + G L  A +    +P
Sbjct: 220 VSILPV--------------------------------FVDMYAKLGLLDSAHKVFEIIP 247

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL--YASAGHWEYV 711
           +  DV+ W T +     +G         +M+ E     P     +S L  YA  G  +  
Sbjct: 248 VK-DVISWNTLITGYAQNGLASEAIEVYKMMEECKEIIPNQGTWVSILPAYAHVGALQQG 306

Query: 712 ANIRKRMKERNL 723
             I  R+ + NL
Sbjct: 307 MKIHGRVIKTNL 318


>gi|225428334|ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 238/604 (39%), Positives = 361/604 (59%), Gaps = 11/604 (1%)

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
           C Q    R A+R    M   G   D  T S ++  CS       GK++H      G    
Sbjct: 31  CHQWDLHR-AMRAMDAMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPK 89

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           + V  +L++MY K  +   ++++  +FD M + NV+SWT +I+ Y  S   + +A+K   
Sbjct: 90  MFVVNTLLNMYVKFNL---LEEAEDLFDEMPERNVVSWTTMISAY--SNKLNDKALKCLI 144

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M +  V PN FT++SVL+AC  L +     Q++   +K G   D  V ++LI +Y++  
Sbjct: 145 LMFREGVRPNMFTYSSVLRACDGLPN---LRQLHCGIIKTGLESDVFVRSALIDVYSKWS 201

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            +++A   F+ +  ++LV +N+++  +A+N +  +A  L   ++  G      T  S+L 
Sbjct: 202 DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLFKRMKRAGFLADQATLTSVLR 261

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + +  +  G Q+H  ++K  F+ +  + NALI MY +C ++E A   F  M +++VIS
Sbjct: 262 ACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSAFSRMVEKDVIS 319

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W++M+ G A++G++ +ALE+F  M   G +PN IT + VL ACSHAGL+ +GW +FRSM 
Sbjct: 320 WSTMVAGLAQNGYSRQALELFESMKESGSRPNYITVLGVLFACSHAGLVEKGWYYFRSMK 379

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
              G+    EHY C++DLLGR+G L EA++ I  M    D + WRT LGACRVH + +L 
Sbjct: 380 KLFGVDPGREHYGCLIDLLGRAGRLDEAVKLIHEMECEPDSVTWRTLLGACRVHRNVDLA 439

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
            +AA+ I+E +P+D   +ILLSN+YA+   WE VA +RK M  R + K  GCSWIE D +
Sbjct: 440 IYAAKKIIELEPEDAGTYILLSNIYANTQRWEDVAEVRKTMTNRGIRKTPGCSWIEVDKQ 499

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           +H F +G+TSHPK  EI   L+ L  ++   GY+PDTNFVL +LE EQK   L  HSEK+
Sbjct: 500 IHVFILGDTSHPKIEEIVQRLNDLIERVMGVGYVPDTNFVLQDLEGEQKEDSLRYHSEKL 559

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A+ FGL++ S+ K +R+ KNLR+CGDCH   K +S +  R IV+RD  R+HH +DG CSC
Sbjct: 560 AIMFGLMNLSREKTVRIRKNLRICGDCHVFAKVVSRMEHRSIVIRDPIRYHHFQDGVCSC 619

Query: 858 NDYW 861
            DYW
Sbjct: 620 GDYW 623



 Score =  202 bits (515), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 147/468 (31%), Positives = 244/468 (52%), Gaps = 37/468 (7%)

Query: 34  PP--FIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRS 91
           PP  ++A P+   PL N      +   + +A+  +D M + G   D  TYS L+K C   
Sbjct: 12  PPLRYVADPS---PLVNEFANFCHQWDLHRAMRAMDAMERHGVFADAITYSELIKCCSAR 68

Query: 92  RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
                GK VH  +     EP   ++N+L+++Y K   L EA  +F  M  +R++VSW++M
Sbjct: 69  GAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFNLLEEAEDLFDEMP-ERNVVSWTTM 127

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           IS+Y N+     A+   + M   G  PN + +S+V+RAC    N+   H     ++K G 
Sbjct: 128 ISAYSNKLND-KALKCLILMFREGVRPNMFTYSSVLRACDGLPNLRQLHC---GIIKTG- 182

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
            +SDV V  ALID++ K S DL++A  VFD+M  ++ V W  +I    Q     +A+ LF
Sbjct: 183 LESDVFVRSALIDVYSKWS-DLDNALGVFDEMPTRDLVVWNSIIGGFAQNSDGNEALNLF 241

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
             M  +GFL D+ TL+ V+ AC+ L L   G+Q+H   ++     D+ +  +L+DMY KC
Sbjct: 242 KRMKRAGFLADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKC 299

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              GS++D+   F RM++ +V+SW+ ++ G  Q+ G  ++A++LF  M +    PN+ T 
Sbjct: 300 ---GSLEDANSAFSRMVEKDVISWSTMVAGLAQN-GYSRQALELFESMKESGSRPNYITV 355

Query: 392 ASVLKACGNLLDSNVAEQVYTH--------AVKRGRALDDCVGNSLISMYARSGRMEDAR 443
             VL AC +   + + E+ + +         V  GR    C    LI +  R+GR+++A 
Sbjct: 356 LGVLFACSH---AGLVEKGWYYFRSMKKLFGVDPGREHYGC----LIDLLGRAGRLDEAV 408

Query: 444 KAFESL-FEKNLVSYNTMVDAYAKNLNSEKAF---ELLHEIEDTGVGT 487
           K    +  E + V++ T++ A   + N + A    + + E+E    GT
Sbjct: 409 KLIHEMECEPDSVTWRTLLGACRVHRNVDLAIYAAKKIIELEPEDAGT 456


>gi|297835272|ref|XP_002885518.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331358|gb|EFH61777.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 904

 Score =  468 bits (1203), Expect = e-129,   Method: Compositional matrix adjust.
 Identities = 264/799 (33%), Positives = 450/799 (56%), Gaps = 42/799 (5%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCG---DLNEANKIFKSMGNKRDIVSWSSMISS 154
           K+ H  LT+  L+ +   +  L++   + G    L+ A ++F++  +      ++S+I  
Sbjct: 48  KMFHLSLTKQGLDDDVSAITKLVARSCELGTRESLSFAKEVFENGESYGTCFMYNSLIRG 107

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y + G   +AI +F+ M+  G  P++Y F   +  C+ + +   G  I+G ++K  Y   
Sbjct: 108 YASSGLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDY-AK 166

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+ V  +L+  + +   +L+ A KVFD+M+E+N V WT MI    +    +DA+ LF  M
Sbjct: 167 DLFVQNSLVHFYAECG-ELDCARKVFDEMSERNVVSWTSMICGYARREFAKDAVDLFFRM 225

Query: 275 IL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           +     +P+  T+  V+SAC++LE   +G++++ +   +G+ ++  +  +LVDMY KC  
Sbjct: 226 VRDEDVIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMISALVDMYMKCN- 284

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
             ++D ++++FD     N+    A+ + YV+ G   KEA+ + + M+   + P+  +  S
Sbjct: 285 --AIDIAKRLFDEYGASNLDLCNAMASNYVRQG-LTKEALGVLNLMMDSGIRPDRISMLS 341

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR------------------ 435
            + +C  L +    +  + + ++ G    D + N+LI MY +                  
Sbjct: 342 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 401

Query: 436 -------------SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
                        +G ++ A + F ++ EKN+VS+NT++ A  +    E+A E+ H ++ 
Sbjct: 402 VVTWNSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYMQS 461

Query: 483 TG-VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              V     T  S+ S    +GA+   + I+  I K+  + +  +   L+ M+SRC + E
Sbjct: 462 QECVNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPE 521

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           +A  +F  + +R+V +WT+ I   A  G   RA+E+F +M+  G+KP+G+ +I  L+AC 
Sbjct: 522 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACC 581

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H GL+ +G + F SM   HG+     HY CMVDLLGR+G L EAL+ I+ MP   + ++W
Sbjct: 582 HGGLVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIW 641

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            + L ACRV G+ E+   AAE I    P+   +++LLSN+YASAG W  +A +R  MKE+
Sbjct: 642 NSLLAACRVQGNVEMAAFAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 701

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            L K  G S I+   K H+F  G+ SHP+  +I A LD+L+ +  + G++PD + VL ++
Sbjct: 702 GLRKPPGTSVIQIRGKTHEFTSGDESHPEMRKIEAMLDELSQRASDLGHVPDLSNVLMDV 761

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           +E++K+  L +HSEK+A+AFGLIS++K   IR+ KNLRVC  CH+  K+ S V  REI+L
Sbjct: 762 DEQEKIFMLSRHSEKLAMAFGLISSNKGTTIRIVKNLRVCSYCHSFAKFASKVYNREIIL 821

Query: 842 RDSNRFHHIKDGKCSCNDY 860
           RD+NRFH I+ GKCSC+D+
Sbjct: 822 RDNNRFHFIRQGKCSCSDF 840



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 154/563 (27%), Positives = 271/563 (48%), Gaps = 48/563 (8%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++AI     M   G  PD  T+   L  C +SR+   G  +H L+ +     +  + 
Sbjct: 112 GLCKEAILLFIRMMNSGISPDKYTFPFGLSVCAKSRDKGNGIQIHGLIIKMDYAKDLFVQ 171

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELG 175
           NSL+  Y++CG+L+ A K+F  M ++R++VSW+SMI  Y  R    DA+ +F  M+ +  
Sbjct: 172 NSLVHFYAECGELDCARKVFDEM-SERNVVSWTSMICGYARREFAKDAVDLFFRMVRDED 230

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             PN      VI AC+  E++  G  +Y F+   G   +D+ +  AL+DM++K +  ++ 
Sbjct: 231 VIPNSVTMVCVISACAKLEDLETGEKVYDFIRDSGIEVNDLMIS-ALVDMYMKCNA-IDI 288

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++FD+    N      M +   + G  ++A+ +   M+ SG  PDR ++   +S+CS+
Sbjct: 289 AKRLFDEYGASNLDLCNAMASNYVRQGLTKEALGVLNLMMDSGIRPDRISMLSAISSCSQ 348

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     GK  H + +R G      +  +L+DMY KC      D + ++FDRM +  V++W
Sbjct: 349 LRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ---DTAFRIFDRMSNKTVVTW 405

Query: 356 TAIITGYVQSGGRD------------------------------KEAVKLFSDMIQGQ-- 383
            +I+ GY+++G  D                              +EA+++F  M Q Q  
Sbjct: 406 NSIVAGYIENGEVDAAWETFNTMPEKNIVSWNTIISALVQENMYEEAIEVFHYM-QSQEC 464

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           V  +  T  S+  ACG+L   ++A+ +Y +  K    LD  +G +L+ M++R G  E A 
Sbjct: 465 VNVDGVTMMSIASACGHLGALDLAKWIYYYIEKNRIQLDVRLGTTLVDMFSRCGDPESAM 524

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
             F SL  +++ ++   + A A   N E+A EL +E+ + G+      F   L+     G
Sbjct: 525 SIFNSLTNRDVSAWTAAIGAMAMAGNVERAIELFNEMIEQGLKPDGVVFIGALTACCHGG 584

Query: 504 AIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSM 561
            + +G++I   + K  G       Y  ++ +  R   +E A Q+ K+M  + N + W S+
Sbjct: 585 LVQQGKEIFNSMEKLHGVSPEDVHYGCMVDLLGRAGLLEEALQLIKDMPTEPNDVIWNSL 644

Query: 562 ITGFAKHG------FAARALEIF 578
           +      G      FAA  +++ 
Sbjct: 645 LAACRVQGNVEMAAFAAEKIQVL 667


>gi|347954538|gb|AEP33769.1| organelle transcript processing 82, partial [Olimarabidopsis
           pumila]
          Length = 710

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 250/694 (36%), Positives = 400/694 (57%), Gaps = 36/694 (5%)

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCT 259
           II+  ++K G  +++  +   L    +    D L  A  VFD + E   + W  M     
Sbjct: 20  IIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLPYAISVFDTIQEPXLLIWNTMFRGHA 79

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
               P  A++L++ M+  G LP+ +T   ++ +C++   F  G+QLH   ++ G  LD+ 
Sbjct: 80  LSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSCAKSXAFKEGQQLHGQVLKFGFDLDLY 139

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG------------- 366
           +  SL+ MY +   +G ++D++KV D+    +V+S+TA+ITGY   G             
Sbjct: 140 IHTSLISMYVQ---NGRLEDAQKVXDKSSHRDVVSYTALITGYASRGXIESAHKMFDEIP 196

Query: 367 -----------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
                            G  KEA++LF  M++  V P+  T  +VL AC       +  Q
Sbjct: 197 VKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQ 256

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V++     G   +  + N+LI +Y++ G +E A   F+ L  K+++S+NT++  Y     
Sbjct: 257 VHSWINDHGFGXNLKIVNALIDLYSKCGELETACGLFQGLSNKDVISWNTLIGGYTHMNL 316

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK--SGFESNHCIY 527
            ++A  L  ++  +G   +  T  S+LS  + +GAI  G  IH  I K   G  +   + 
Sbjct: 317 YKEALLLFQDMLRSGEKPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLR 376

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
            +LI MY++C ++EAA QVF  M +R++ SW +MI GFA HG A  A +IF +M  +GI+
Sbjct: 377 TSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIE 436

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+ IT++ +LSACSH+G++  G   FRSM  ++ ++ ++EHY CM+DL G SG   EA +
Sbjct: 437 PDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEHYGCMIDLXGHSGLFKEAEK 496

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I +M +  D ++W + L AC++HG+ ELG+  A+ +++ +P++P +++LLSN+YA+A  
Sbjct: 497 MINTMEMEPDGVIWCSLLKACKMHGNVELGESYAQNLIKIEPENPGSYVLLSNIYATAER 556

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W  VA  R  + ++ + K  GCS IE D+ VH+F +G+  HP+  EIY  L+++ + ++E
Sbjct: 557 WNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKFHPRNREIYGMLEEMEVLLEE 616

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            G++PDT+ VL E+EEE K   L  HSEK+A+AFGLIST     + + KNLRVC +CH A
Sbjct: 617 AGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHEA 676

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K IS +  REI+ RD  RFHH +DG+CSCNDYW
Sbjct: 677 TKLISKIYKREIIARDRTRFHHFRDGECSCNDYW 710



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/536 (26%), Positives = 257/536 (47%), Gaps = 56/536 (10%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS---LYSKCGDLN 130
           NHP L     LL  C   +     +++H+ + ++ L   +  L+ L+    L      L 
Sbjct: 2   NHPSLS----LLHXC---KTLQSLRIIHAQMIKTGLHNTNYALSKLLEXCVLSPHFDGLP 54

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
            A  +F ++  +  ++ W++M   +      V A+ ++V M+ LG  PN Y F  ++++C
Sbjct: 55  YAISVFDTI-QEPXLLIWNTMFRGHALSSDPVSALKLYVCMVSLGLLPNSYTFPFLLKSC 113

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD----------------- 232
           + +     G  ++G +LK G FD D+ +  +LI M+V+ G ++                 
Sbjct: 114 AKSXAFKEGQQLHGQVLKFG-FDLDLYIHTSLISMYVQNGRLEDAQKVXDKSSHRDVVSY 172

Query: 233 ------------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
                       +ESA+K+FD++  K+ V W   I+   + G  ++A+ LF  M+ +   
Sbjct: 173 TALITGYASRGXIESAHKMFDEIPVKDVVSWNAXISGYAETGNYKEALELFKKMMKTNVR 232

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD  T+  V+SAC++      G+Q+HSW    G   ++ +  +L+D+Y+KC   G ++ +
Sbjct: 233 PDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIVNALIDLYSKC---GELETA 289

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             +F  + + +V+SW  +I GY       KEA+ LF DM++    PN  T  S+L AC +
Sbjct: 290 CGLFQGLSNKDVISWNTLIGGYTHM-NLYKEALLLFQDMLRSGEKPNDVTMLSILSACAH 348

Query: 401 LLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
           L   ++   ++ +  KR + + +   +  SLI MYA+ G +E A++ F+S+  ++L S+N
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH---ARI 515
            M+  +A +  +  AF++   +   G+     TF  LLS  S  G +  G  I     R 
Sbjct: 409 AMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRD 468

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHG 569
            K   +  H  Y  +I +       + A ++    EME   VI W S++     HG
Sbjct: 469 YKLMPKLEH--YGCMIDLXGHSGLFKEAEKMINTMEMEPDGVI-WCSLLKACKMHG 521



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 77/250 (30%), Positives = 129/250 (51%), Gaps = 3/250 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M +    PD  T   +L +C +S +  LG+ VHS +       N  I+
Sbjct: 214 GNYKEALELFKKMMKTNVRPDESTMVTVLSACAQSGSIELGRQVHSWINDHGFGXNLKIV 273

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LYSKCG+L  A  +F+ + NK D++SW+++I  Y +     +A+ +F +ML  G 
Sbjct: 274 NALIDLYSKCGELETACGLFQGLSNK-DVISWNTLIGGYTHMNLYKEALLLFQDMLRSGE 332

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLES 235
            PN+    +++ AC++   + IG  I+ ++ K      +   +  +LIDM+ K   D+E+
Sbjct: 333 KPNDVTMLSILSACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG-DIEA 391

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD M  ++   W  MI      G    A  +F  M  +G  PD  T  G++SACS 
Sbjct: 392 AQQVFDSMLNRSLSSWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSH 451

Query: 296 LELFTSGKQL 305
             +   G+ +
Sbjct: 452 SGMLDLGRHI 461



 Score = 42.4 bits (98), Expect = 1.2,   Method: Compositional matrix adjust.
 Identities = 30/99 (30%), Positives = 43/99 (43%), Gaps = 1/99 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVI 115
           GR   A      M + G  PD  T+  LL +C  S    LG+ +   +TR  KL P    
Sbjct: 418 GRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTRDYKLMPKLEH 477

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
              +I L    G   EA K+  +M  + D V W S++ +
Sbjct: 478 YGCMIDLXGHSGLFKEAEKMINTMEMEPDGVIWCSLLKA 516


>gi|356498743|ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 221/559 (39%), Positives = 351/559 (62%), Gaps = 5/559 (0%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+  +  G   D+ +   L+  YA+     ++DD+  +FD +   +  +W+ ++ G+
Sbjct: 20  RQVHAHVVANGTLQDLVIANKLLYTYAQ---HKAIDDAYSLFDGLTMRDSKTWSVMVGGF 76

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            ++G         F ++++  V P+++T   V++ C +  D  +   ++   +K G   D
Sbjct: 77  AKAGDH-AGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSD 135

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  SL+ MYA+   +EDA++ FE +  K+LV++  M+ AYA + N+ ++  L   + +
Sbjct: 136 HFVCASLVDMYAKCIVVEDAQRLFERMLSKDLVTWTVMIGAYA-DCNAYESLVLFDRMRE 194

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            GV        ++++  + +GA+ +    +  I+++GF  +  +  A+I MY++C +VE+
Sbjct: 195 EGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVILGTAMIDMYAKCGSVES 254

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A +VF  M+++NVISW++MI  +  HG    A+++F+ ML+  I PN +T++++L ACSH
Sbjct: 255 AREVFDRMKEKNVISWSAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSH 314

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGLI EG + F SM++EH +   ++HY CMVDLLGR+G L EAL  I +M +  D  +W 
Sbjct: 315 AGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWS 374

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             LGACR+H   EL + AA  +LE  PQ+P  ++LLSN+YA AG WE VA  R  M +R 
Sbjct: 375 ALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNIYAKAGKWEKVAKFRDMMTQRK 434

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           L K  G +WIE DNK ++F VG+ SHP++ EIY  L  L  K++  GY+PDT+FVL ++E
Sbjct: 435 LKKIPGWTWIEVDNKTYQFSVGDRSHPQSKEIYEMLMSLIKKLEMAGYVPDTDFVLQDVE 494

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE K + L+ HSEK+A+AFGLI+  + +PIR+ KNLRVCGDCHT  K +S +  R I++R
Sbjct: 495 EEVKQEMLYTHSEKLAIAFGLIAIPEGEPIRISKNLRVCGDCHTFSKMVSSIMRRSIIVR 554

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+NRFHH  DG CSC DYW
Sbjct: 555 DANRFHHFNDGTCSCGDYW 573



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 131/415 (31%), Positives = 222/415 (53%), Gaps = 27/415 (6%)

Query: 86  KSCI----RSRN-FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           +SCI    R RN FH+ + VH+ +  +    + VI N L+  Y++   +++A  +F  + 
Sbjct: 4   ESCIDLLLRCRNVFHI-RQVHAHVVANGTLQDLVIANKLLYTYAQHKAIDDAYSLFDGL- 61

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
             RD  +WS M+  +   G        F E+L  G  P+ Y    VIR C +  ++ IG 
Sbjct: 62  TMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRTCRDRTDLQIGR 121

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           +I+  +LK G   SD  V  +L+DM+ K  V +E A ++F++M  K+ V WT+MI     
Sbjct: 122 VIHDVVLKHGLL-SDHFVCASLVDMYAKCIV-VEDAQRLFERMLSKDLVTWTVMIGAYAD 179

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                +++ LF  M   G +PD+  +  VV+AC++L      +  + + +R G +LDV +
Sbjct: 180 CN-AYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVIL 238

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           G +++DMYAKC   GSV+ +R+VFDRM + NV+SW+A+I  Y    GR K+A+ LF  M+
Sbjct: 239 GTAMIDMYAKC---GSVESAREVFDRMKEKNVISWSAMIAAY-GYHGRGKDAIDLFHMML 294

Query: 381 QGQVAPNHFTFASVLKACGN--LLDSNVA---EQVYTHAVKRGRALDDCVGNSLISMYAR 435
              + PN  TF S+L AC +  L++  +         HAV+       C    ++ +  R
Sbjct: 295 SCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTC----MVDLLGR 350

Query: 436 SGRMEDARKAFESL-FEKNLVSYNTMVDA---YAKNLNSEKAFELLHEIEDTGVG 486
           +GR+++A +  E++  EK+   ++ ++ A   ++K   +EKA   L E++    G
Sbjct: 351 AGRLDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPG 405



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 95/337 (28%), Positives = 174/337 (51%), Gaps = 17/337 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ AY +FD +T +++  W++M+    + G        F +++  G  PD +TL  V+  
Sbjct: 51  IDDAYSLFDGLTMRDSKTWSVMVGGFAKAGDHAGCYATFRELLRCGVTPDNYTLPFVIRT 110

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C +      G+ +H   ++ GL  D  V  SLVDMYAKC V   V+D++++F+RML  ++
Sbjct: 111 CRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIV---VEDAQRLFERMLSKDL 167

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++WT +I  Y        E++ LF  M +  V P+     +V+ AC  L   + A     
Sbjct: 168 VTWTVMIGAYADCNA--YESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFAND 225

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + V+ G +LD  +G ++I MYA+ G +E AR+ F+ + EKN++S++ M+ AY  +   + 
Sbjct: 226 YIVRNGFSLDVILGTAMIDMYAKCGSVESAREVFDRMKEKNVISWSAMIAAYGYHGRGKD 285

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI------ 526
           A +L H +    +  +  TF SLL   S  G I +G     R   S +E  H +      
Sbjct: 286 AIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEG----LRFFNSMWE-EHAVRPDVKH 340

Query: 527 YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMI 562
           Y  ++ +  R   ++ A ++ + M  +++   W++++
Sbjct: 341 YTCMVDLLGRAGRLDEALRLIEAMTVEKDERLWSALL 377



 Score =  129 bits (323), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 173/333 (51%), Gaps = 21/333 (6%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD  T   ++++C    +  +G+++H ++ +  L  +  +  SL+ +Y+KC  + +A
Sbjct: 96  GVTPDNYTLPFVIRTCRDRTDLQIGRVIHDVVLKHGLLSDHFVCASLVDMYAKCIVVEDA 155

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F+ M +K D+V+W+ MI +Y +     +++ +F  M E G  P++     V+ AC+ 
Sbjct: 156 QRLFERMLSK-DLVTWTVMIGAYAD-CNAYESLVLFDRMREEGVVPDKVAMVTVVNACAK 213

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGW 251
              +        ++++ G F  DV +G A+IDM+ K GSV  ESA +VFD+M EKN + W
Sbjct: 214 LGAMHRARFANDYIVRNG-FSLDVILGTAMIDMYAKCGSV--ESAREVFDRMKEKNVISW 270

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS--W- 308
           + MI      G  +DAI LF  M+    LP+R T   ++ ACS   L   G +  +  W 
Sbjct: 271 SAMIAAYGYHGRGKDAIDLFHMMLSCAILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWE 330

Query: 309 --AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQS 365
             A+R  +    C    +VD+  +    G +D++ ++ + M ++ +   W+A++ G  + 
Sbjct: 331 EHAVRPDVKHYTC----MVDLLGRA---GRLDEALRLIEAMTVEKDERLWSALL-GACRI 382

Query: 366 GGRDKEAVKLFSDMIQGQVA-PNHFTFASVLKA 397
             + + A K  + +++ Q   P H+   S + A
Sbjct: 383 HSKMELAEKAANSLLELQPQNPGHYVLLSNIYA 415



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           D    +++   D M ++G  PD      ++ +C +    H  +  +  + R+    + ++
Sbjct: 179 DCNAYESLVLFDRMREEGVVPDKVAMVTVVNACAKLGAMHRARFANDYIVRNGFSLDVIL 238

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             ++I +Y+KCG +  A ++F  M  K +++SWS+MI++Y   G+  DAI +F  ML   
Sbjct: 239 GTAMIDMYAKCGSVESAREVFDRMKEK-NVISWSAMIAAYGYHGRGKDAIDLFHMMLSCA 297

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             PN   F +++ ACS+   +  G   +  + +      DV     ++D+  +    L+ 
Sbjct: 298 ILPNRVTFVSLLYACSHAGLIEEGLRFFNSMWEEHAVRPDVKHYTCMVDLLGRAG-RLDE 356

Query: 236 AYKVFDKMT-EKNTVGWTLMITRC 258
           A ++ + MT EK+   W+ ++  C
Sbjct: 357 ALRLIEAMTVEKDERLWSALLGAC 380


>gi|225436612|ref|XP_002275537.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Vitis vinifera]
          Length = 694

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/698 (34%), Positives = 402/698 (57%), Gaps = 10/698 (1%)

Query: 78  LDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           +DT  LL  LK+CI S+    GKL+H  +    L+ N  +  SLI+LY  C     A  +
Sbjct: 1   MDTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLV 60

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTE 194
           F+++ N  DI  W+ ++++       ++ + +F  +L   +  P+ + + +V++ACS   
Sbjct: 61  FQTIENPLDITLWNGLMAACTKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLG 120

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
            V  G +++  ++K G F  DV V  + + M+ K +V  E A K+FD+M E++   W  +
Sbjct: 121 RVGYGKMVHTHVIKSG-FAMDVVVMSSAVGMYAKCNV-FEDAIKLFDEMPERDVASWNNV 178

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+   Q G P  A+ LF +M +SGF PD  TL+ V+S+C+ L     GK++H   +R+G 
Sbjct: 179 ISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF 238

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           ALD  V  +LVDMY KC   G ++ +++VF+++   NV+SW ++I GY    G  K  ++
Sbjct: 239 ALDGFVSSALVDMYGKC---GCLEMAKEVFEQIQRKNVVSWNSMIAGY-SLKGDSKSCIE 294

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF  M +  + P   T +S+L AC   ++  + + ++ + ++     D  V +SLI +Y 
Sbjct: 295 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYF 354

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +  A   F+++ + N+VS+N M+  Y K  +  +A  +  ++   GV   A TF S
Sbjct: 355 KCGNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTS 414

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   S +  + KG++IH  II+S  E N  +  AL+ MY++C  V+ A  +F ++ +R+
Sbjct: 415 VLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERD 474

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
            +SWTSMI  +  HG A  AL++F KM     KP+ +T++A+LSACSHAGL+ EG  +F 
Sbjct: 475 FVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFN 534

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP-LSADVLVWRTFLGACRVHGD 673
            M  E+G    +EHY+C++DLLGR G L EA E ++  P +  DV +  T   AC +H  
Sbjct: 535 QMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKK 594

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            +LG+    +++E+DP DP+ +I+LSN+YAS   W+ V  +R ++KE  L K  GCSWIE
Sbjct: 595 LDLGEQIGRLLIEKDPDDPSTYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIE 654

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
              ++H F V + SHP+   IY  +  LA  ++++  L
Sbjct: 655 VGKRIHPFVVEDKSHPQADMIYECMSILASHVEKYQVL 692



 Score =  242 bits (618), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 251/478 (52%), Gaps = 8/478 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  +LK+C        GK+VH+ + +S    + V+++S + +Y+KC    +A K+
Sbjct: 104 PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKL 163

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +RD+ SW+++IS Y   G+   A+ +F EM   GF P+    + VI +C+   +
Sbjct: 164 FDEM-PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 222

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+  L++ G F  D  V  AL+DM+ K    LE A +VF+++  KN V W  MI
Sbjct: 223 LERGKEIHMELVRSG-FALDGFVSSALVDMYGKCGC-LEMAKEVFEQIQRKNVVSWNSMI 280

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
              +  G  +  I LF  M   G  P   TLS ++ ACS       GK +H + IR  + 
Sbjct: 281 AGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVE 340

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D+ V  SL+D+Y KC   G++  +  VF  M   NV+SW  +I+GYV+ G    EA+ +
Sbjct: 341 ADIFVNSSLIDLYFKC---GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSY-LEALVI 396

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F+DM +  V P+  TF SVL AC  L      ++++   ++    +++ V  +L+ MYA+
Sbjct: 397 FTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAK 456

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +++A   F  L E++ VS+ +M+ AY  +  + +A +L  +++ +       TF ++
Sbjct: 457 CGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAI 516

Query: 496 LSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           LS  S  G + +G    +  I + GF+     Y+ LI +  R   +  A+++ +   D
Sbjct: 517 LSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 574



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 228/412 (55%), Gaps = 27/412 (6%)

Query: 47  SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           +N +  +  DG+ +KA+   + M   G  PD  T + ++ SC R  +   GK +H  L R
Sbjct: 176 NNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVR 235

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S    +  + ++L+ +Y KCG L  A ++F+ +  ++++VSW+SMI+ Y  +G     I 
Sbjct: 236 SGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI-QRKNVVSWNSMIAGYSLKGDSKSCIE 294

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M E G  P     S+++ ACS + N+ +G  I+G++++    ++D+ V  +LID++
Sbjct: 295 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLY 353

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K   ++ SA  VF  M + N V W +MI+   ++G   +A+ +F DM  +G  PD  T 
Sbjct: 354 FKCG-NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 412

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + V+ ACS+L +   GK++H++ I + L ++  V  +L+DMYAKC   G+VD++  +F++
Sbjct: 413 TSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKC---GAVDEALHIFNQ 469

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDS 404
           + + + +SWT++I  Y  S G+  EA+KLF  M Q    P+  TF ++L AC    L+D 
Sbjct: 470 LPERDFVSWTSMIAAY-GSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDE 528

Query: 405 N-------VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
                   +AE  +  AV+    L D +G        R GR+   R+A+E L
Sbjct: 529 GCYYFNQMIAEYGFKPAVEHYSCLIDLLG--------RVGRL---REAYEIL 569



 Score =  182 bits (463), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/501 (25%), Positives = 246/501 (49%), Gaps = 31/501 (6%)

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D   L  ++  C + +    GK +H   +  GL  ++ +  SL+++Y  C +  S     
Sbjct: 2   DTTKLLSLLKTCIDSKYLKQGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVF 61

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGN 400
           +  +  LD  +  W  ++    ++     E +++F  ++    + P+ FT+ SVLKAC  
Sbjct: 62  QTIENPLD--ITLWNGLMAACTKNFIF-IEGLEVFHRLLHFPYLKPDAFTYPSVLKACSG 118

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L      + V+TH +K G A+D  V +S + MYA+    EDA K F+ + E+++ S+N +
Sbjct: 119 LGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNV 178

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +  Y ++   EKA EL  E++ +G    + T  +++S  + +  + +G++IH  +++SGF
Sbjct: 179 ISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGF 238

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
             +  + +AL+ MY +C  +E A +VF++++ +NV+SW SMI G++  G +   +E+F +
Sbjct: 239 ALDGFVSSALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRR 298

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M  +GI+P   T  ++L ACS +  +  G K        + +   +   + ++DL  + G
Sbjct: 299 MDEEGIRPTLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKCG 357

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD----PAAHI 696
           ++  A    ++MP   +V+ W        + G  ++G +   +++  D +     P A  
Sbjct: 358 NIGSAENVFQNMP-KTNVVSWNVM-----ISGYVKVGSYLEALVIFTDMRKAGVKPDAIT 411

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
             S L A +     +A + K  +  N I E+            K  + E      L++YA
Sbjct: 412 FTSVLPACSQ----LAVLEKGKEIHNFIIES------------KLEINEVVMGALLDMYA 455

Query: 757 ELDQLALKIKEFGYLPDTNFV 777
           +   +   +  F  LP+ +FV
Sbjct: 456 KCGAVDEALHIFNQLPERDFV 476



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/214 (29%), Positives = 112/214 (52%), Gaps = 5/214 (2%)

Query: 31  SSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           S+   F   P T+    N +I  ++  G   +A+     M + G  PD  T++ +L +C 
Sbjct: 361 SAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACS 420

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
           +      GK +H+ +  SKLE N V++ +L+ +Y+KCG ++EA  IF  +  +RD VSW+
Sbjct: 421 QLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQL-PERDFVSWT 479

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           SMI++Y + G+  +A+ +F +M +    P++  F A++ ACS+   V  G   +  ++  
Sbjct: 480 SMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAE 539

Query: 210 GYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDK 242
             F   V     LID+   G V  L  AY++  +
Sbjct: 540 YGFKPAVEHYSCLIDLL--GRVGRLREAYEILQR 571


>gi|413946633|gb|AFW79282.1| hypothetical protein ZEAMMB73_599854 [Zea mays]
          Length = 863

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 282/805 (35%), Positives = 444/805 (55%), Gaps = 17/805 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G++ +A++   L+      PD D Y  L + C   R    G    +            + 
Sbjct: 70  GQLAQALW---LLESSAEPPDEDAYVALFRLCEWRRAVEPGLRACAHADDRHAWFGLRLG 126

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+++S+  + G+   A ++F  M  +RD+ SW+ M+  Y   G   +A+ ++  M+  G 
Sbjct: 127 NAMLSMLVRFGETWHAWRVFAKM-PERDVFSWNVMVGGYGKSGLLDEALDLYHRMMWAGV 185

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ Y F  V+R+C    +  +G  ++  +L+ G F  +V V  AL+ M+ K   D+ +A
Sbjct: 186 RPDVYTFPCVLRSCGGVPDWRMGREVHAHVLRFG-FGEEVDVLNALMTMYAKCG-DVMAA 243

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            KVFD MT  + + W  MI    + G     + LFL M+     P+  T++ V  A   L
Sbjct: 244 RKVFDSMTVMDCISWNAMIAGHFENGECNAGLELFLTMLHDEVQPNLMTITSVTVASGLL 303

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
              T  K++H  A++ G A DV    SL+ MYA     G +  +R VF RM   + M+WT
Sbjct: 304 SDVTFAKEMHGLAVKRGFAGDVAFCNSLIQMYASL---GMMRQARTVFSRMDTRDAMTWT 360

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I+GY ++G  DK A+++++ M    V+P+  T AS L AC  L   +V  +++  A  
Sbjct: 361 AMISGYEKNGFPDK-ALEVYALMEVNNVSPDDITIASALAACACLGSLDVGVKLHELAES 419

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-LNSEKAFE 475
           +G      V N+++ MYA+S R++ A + F+ + EK++VS+++M+  +  N  N E  + 
Sbjct: 420 KGFISYIVVTNAILEMYAKSKRIDKAIEVFKCMHEKDVVSWSSMIAGFCFNHRNFEALYY 479

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
             H + D  V  ++ TF + L+  ++ GA+  G++IHA +++ G E    + NALI +Y 
Sbjct: 480 FRHMLAD--VKPNSVTFIAALAACAATGALRSGKEIHAHVLRCGIEYEGYLPNALIDLYV 537

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C     A+  F     ++V+SW  MI GF  HG    AL  F +M+  G  P+ +T++A
Sbjct: 538 KCGQTGYAWAQFCAHGAKDVVSWNIMIAGFVAHGHGDTALSFFNQMVKIGECPDEVTFVA 597

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L ACS  G++SEGW+ F SM +++ IV  ++HYACMVDLL R+G LTEA  FI  MP++
Sbjct: 598 LLCACSRGGMVSEGWELFHSMTEKYSIVPNLKHYACMVDLLSRAGQLTEAYNFINEMPIT 657

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            D  VW   L  CR+H   ELG+ AA+ +L  +P D   H+LL +LYA A  W+ +A +R
Sbjct: 658 PDAAVWGALLNGCRIHRHVELGELAAKYVLALEPNDAGYHVLLCDLYADACLWDKLARVR 717

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K M+E+ L  ++GCSW+E    VH F   + SHP+  EI   L+ +  ++K  GY P  +
Sbjct: 718 KTMREKGLDHDSGCSWVEVKGVVHAFLTDDESHPQIREINTVLEGIYERMKASGYAPVES 777

Query: 776 FVLHELEEEQKVQYLF-QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
              H  E+E     +F  HSE++AVAFGLI+T+    I V KN   C  CH  +K IS +
Sbjct: 778 ---HCPEDEVLKDDIFCGHSERLAVAFGLINTTPGTSISVTKNQYTCQSCHRILKMISNI 834

Query: 835 TGREIVLRDSNRFHHIKDGKCSCND 859
             R+I++RDS + HH KDG CSC D
Sbjct: 835 VRRDIIVRDSKQLHHFKDGSCSCGD 859


>gi|225432688|ref|XP_002282622.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Vitis vinifera]
          Length = 684

 Score =  467 bits (1202), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 246/643 (38%), Positives = 374/643 (58%), Gaps = 9/643 (1%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           L++M+ K  +D  ++ ++   +T  ++ V WT +I    Q G    A+  F +M      
Sbjct: 48  LVNMYSK--LDRPNSAQLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQ 105

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+ FT      A   L     GKQ+H+ A++ G   DV VGCS  DMY+K    G  +++
Sbjct: 106 PNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDVFVGCSAFDMYSKA---GLTEEA 162

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           RK+FD M + N+ +W A ++  V  G R  +A+  F +       PN  TF + L AC  
Sbjct: 163 RKMFDEMPERNIATWNAYLSNSVLEG-RYDDALTAFIEFRHEGWEPNLITFCAFLNACAG 221

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                +  Q++   ++ G   D  V N LI  Y +  ++  +   F  + + N VS+ +M
Sbjct: 222 ASYLRLGRQLHGFVLQSGFEADVSVANGLIDFYGKCHQVGCSEIIFSGISKPNDVSWCSM 281

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           + +Y +N   EKA  +       G+  + +  +S+LS  + +  +  G+ +H   +K+  
Sbjct: 282 IVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACV 341

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
             N  + +AL+ MY +C ++E A + F EM +RN+++W +MI G+A  G A  A+ +F +
Sbjct: 342 VGNIFVGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDE 401

Query: 581 MLADG--IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
           M      + PN +T++ VLSACS AG ++ G + F SM   +GI    EHYAC+VDLLGR
Sbjct: 402 MTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGR 461

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           +G + +A +FI+ MP+   V VW   LGA ++ G +ELGK AA+ + E DP D   H+LL
Sbjct: 462 AGMVEQAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLL 521

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SN++A+AG WE    +RK MK+  + K AGCSWI A N VH F   +TSH +  EI A L
Sbjct: 522 SNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAML 581

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
            +L  +++  GY+PDT+F L +LEEE+K   ++ HSEKIA+AFGLIS     PIR+ KNL
Sbjct: 582 AKLRGEMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNL 641

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R+CGDCH+AIK+IS + GREI++RD+N FH  +D +CSC DYW
Sbjct: 642 RICGDCHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 684



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 147/498 (29%), Positives = 246/498 (49%), Gaps = 13/498 (2%)

Query: 76  PDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEA 132
           P L   SL  L++S + ++   LG+  H+ + ++   P  S I N L+++YSK    N A
Sbjct: 2   PFLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++  S+   R +V+W+++I+  V  G+   A+  F  M      PN++ F    +A  +
Sbjct: 62  -QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
             +  +G  ++   +K G   SDV VGC+  DM+ K  +  E A K+FD+M E+N   W 
Sbjct: 121 LRSPLVGKQVHALAVKAGQI-SDVFVGCSAFDMYSKAGLT-EEARKMFDEMPERNIATWN 178

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
             ++     G   DA+  F++    G+ P+  T    ++AC+       G+QLH + +++
Sbjct: 179 AYLSNSVLEGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQS 238

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G   DV V   L+D Y KC   G    S  +F  +   N +SW ++I  YVQ+   +K  
Sbjct: 239 GFEADVSVANGLIDFYGKCHQVGC---SEIIFSGISKPNDVSWCSMIVSYVQNDEEEKAC 295

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +       +G + P  F  +SVL AC  L    V + V+T AVK     +  VG++L+ M
Sbjct: 296 LVFLRARKEG-IEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDM 354

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE--DTGVGTSAY 490
           Y + G +EDA +AF+ + E+NLV++N M+  YA    ++ A  L  E+      V  +  
Sbjct: 355 YGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYV 414

Query: 491 TFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           TF  +LS  S  G++  G +I   +  + G E     Y  ++ +  R   VE A+Q  K+
Sbjct: 415 TFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVEQAYQFIKK 474

Query: 550 MEDRNVISWTSMITGFAK 567
           M  R  +S    + G +K
Sbjct: 475 MPIRPTVSVWGALLGASK 492



 Score =  201 bits (512), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/529 (29%), Positives = 247/529 (46%), Gaps = 54/529 (10%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR   A+F    M +    P+  T+    K+    R+  +GK VH+L  ++    + 
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  S   +YSK G   EA K+F  M  +R+I +W++ +S+ V  G+  DA+  F+E   
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEM-PERNIATWNAYLSNSVLEGRYDDALTAFIEFRH 202

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G+ PN   F A + AC+    + +G  ++GF+L+ G F++DV V   LID + K    +
Sbjct: 203 EGWEPNLITFCAFLNACAGASYLRLGRQLHGFVLQSG-FEADVSVANGLIDFYGKCH-QV 260

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             +  +F  +++ N V W  MI    Q      A  +FL     G  P  F +S V+SAC
Sbjct: 261 GCSEIIFSGISKPNDVSWCSMIVSYVQNDEEEKACLVFLRARKEGIEPTDFMVSSVLSAC 320

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + L +   GK +H+ A++  +  ++ VG +LVDMY KC   GS++D+ + FD M + N++
Sbjct: 321 AGLSVLEVGKSVHTLAVKACVVGNIFVGSALVDMYGKC---GSIEDAERAFDEMPERNLV 377

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           +W A+I GY   G  D  AV LF +M  G  +VAPN+ TF  VL AC      NV  +++
Sbjct: 378 TWNAMIGGYAHQGQADM-AVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIF 436

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
                              SM  R G             E     Y  +VD   +    E
Sbjct: 437 E------------------SMRGRYG------------IEPGAEHYACVVDLLGRAGMVE 466

Query: 472 KAFELLHE--IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           +A++ + +  I  T     A   AS + G S +G +          + SG   NH +   
Sbjct: 467 QAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSG---NHVL--- 520

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNV-----ISWTSMITGFAKHGFAAR 573
           L +M++     E A  V KEM+D  +      SW +   G A H F A+
Sbjct: 521 LSNMFAAAGRWEEATLVRKEMKDVGIKKGAGCSWIT--AGNAVHVFQAK 567



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 100/222 (45%), Gaps = 12/222 (5%)

Query: 400 NLLDSNVAEQVYTHAVKRGRA------------LDDCVGNSLISMYARSGRMEDARKAFE 447
           N L S V   V T   + GRA            L   + N L++MY++  R   A+    
Sbjct: 7   NSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLLLS 66

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
               +++V++  ++    +N     A      +    +  + +TF      + S+ +   
Sbjct: 67  LTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLV 126

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+Q+HA  +K+G  S+  +  +   MYS+    E A ++F EM +RN+ +W + ++    
Sbjct: 127 GKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSVL 186

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
            G    AL  F +   +G +PN IT+ A L+AC+ A  +  G
Sbjct: 187 EGRYDDALTAFIEFRHEGWEPNLITFCAFLNACAGASYLRLG 228



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 58/229 (25%), Positives = 106/229 (46%), Gaps = 6/229 (2%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           I++P      S  + Y  ND   +KA        ++G  P     S +L +C       +
Sbjct: 270 ISKPNDVSWCSMIVSYVQNDEE-EKACLVFLRARKEGIEPTDFMVSSVLSACAGLSVLEV 328

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK VH+L  ++ +  N  + ++L+ +Y KCG + +A + F  M  +R++V+W++MI  Y 
Sbjct: 329 GKSVHTLAVKACVVGNIFVGSALVDMYGKCGSIEDAERAFDEM-PERNLVTWNAMIGGYA 387

Query: 157 NRGKQVDAIHMFVEML--ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           ++G+   A+ +F EM        PN   F  V+ ACS   +V +G  I+  +      + 
Sbjct: 388 HQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEP 447

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRCTQLG 262
                  ++D+  +  + +E AY+   KM  + TV  W  ++      G
Sbjct: 448 GAEHYACVVDLLGRAGM-VEQAYQFIKKMPIRPTVSVWGALLGASKMFG 495



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 7/188 (3%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
           S  + ASL+  A S      G   HA+IIK+        IYN L++MYS+     +A  +
Sbjct: 5   SPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLL 64

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS--HAG 604
                +R+V++WT++I G  ++G    AL  F  M  D I+PN  T+     A     + 
Sbjct: 65  LSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSP 124

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+    K   ++  + G +  +       D+  ++G   EA +    MP   ++  W  +
Sbjct: 125 LVG---KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNAY 180

Query: 665 LGACRVHG 672
           L    + G
Sbjct: 181 LSNSVLEG 188


>gi|307136183|gb|ADN34022.1| hypothetical protein [Cucumis melo subsp. melo]
          Length = 773

 Score =  467 bits (1201), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/747 (33%), Positives = 426/747 (57%), Gaps = 31/747 (4%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YS    L+++ ++F ++ +    ++W S+I  Y + G    ++  F+ ML  G  P+  
Sbjct: 51  IYSHINLLHDSLRLFNTL-HFPPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHN 109

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES------ 235
            F +V++AC+   ++ +G  ++G++++ G  D D+  G AL++M+ K     +S      
Sbjct: 110 VFPSVLKACAMLMDLNLGESLHGYIIRVG-LDFDLYTGNALMNMYSKLRFLKKSGRQRLG 168

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +V D+MTE+     T  +    Q     D      D+                 +C  
Sbjct: 169 ASQVLDEMTERTRSVRTASVLVGNQGRKVSDIEAFNYDV-----------------SCRS 211

Query: 296 LELFTSGKQLHSWAIRTGLALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            E      ++          ++ C +G  + D+    +   SVD  RK+F+ M + +++S
Sbjct: 212 REFEAQVLEIDYKPRSEYREMEACNLGQQIKDI----SHSMSVDSVRKIFEMMPEKDLVS 267

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W  II G  ++G    E + +  +M    + P+ FT +SVL      +D +  ++++  +
Sbjct: 268 WNTIIAGNARNGLYG-ETLTMVREMGGANLKPDSFTLSSVLPLIAENVDISKGKEIHGCS 326

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +++G   +  V +SLI MYA+  R+ D+ + F  L E++ +S+N+++    +N   ++  
Sbjct: 327 IRQGLDAEVYVASSLIDMYAKCTRVVDSYRVFTLLTERDGISWNSIIAGCVQNGLFDEGL 386

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           +   ++    +   +Y+F+S++   + +  +  G+Q+H  I ++GF+ N  I ++L+ MY
Sbjct: 387 KFFRQMLMAKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMY 446

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C N+  A Q+F  M  R+++SWT+MI G A HG A  A+E+F +M  +GI+PN + ++
Sbjct: 447 AKCGNIRTARQIFDRMRLRDMVSWTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFM 506

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           AVL+ACSHAGL+ E WK+F SM  + GI   +EHYA + DLLGR+G L EA +FI  MP+
Sbjct: 507 AVLTACSHAGLVDEAWKYFNSMTLDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMPI 566

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
                VW T L ACRVH + ++ +  A  ILE DP++  A+ILL+N+Y++A  W+  A  
Sbjct: 567 GPTGSVWATLLSACRVHKNVDMAEKVANRILEVDPKNTGAYILLANIYSAARRWKEAAKW 626

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R  ++   + K   CSWIE  NKV+ F  G+ SHP   +I   ++ L   +++ GY+PDT
Sbjct: 627 RASLRRTGIRKTPACSWIEVRNKVYAFMAGDESHPCYEKIREAMEVLMELMEKEGYVPDT 686

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           + V H++EEEQK   +  HSE++A+ FG+I+T     IRV KNLRVC DCHTA K+IS +
Sbjct: 687 SEVHHDVEEEQKKYLVCSHSERLAIVFGIINTPAGTTIRVTKNLRVCTDCHTATKFISKI 746

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
            GREIV+RD++RFHH K+G CSC DYW
Sbjct: 747 VGREIVVRDNSRFHHFKNGTCSCGDYW 773



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 247/509 (48%), Gaps = 58/509 (11%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   K++ +   M   G +PD + +  +LK+C    + +LG+ +H  + R  L+ +    
Sbjct: 87  GLPHKSLGSFIGMLASGLYPDHNVFPSVLKACAMLMDLNLGESLHGYIIRVGLDFDLYTG 146

Query: 117 NSLISLYSKCGDLNE-------ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF- 168
           N+L+++YSK   L +       A+++   M  +   V  +S++    N+G++V  I  F 
Sbjct: 147 NALMNMYSKLRFLKKSGRQRLGASQVLDEMTERTRSVRTASVLVG--NQGRKVSDIEAFN 204

Query: 169 -----------VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                       ++LE+ + P                             +  Y + + C
Sbjct: 205 YDVSCRSREFEAQVLEIDYKP-----------------------------RSEYREMEAC 235

Query: 218 -VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +G  + D  +  S+ ++S  K+F+ M EK+ V W  +I    + G   + + +  +M  
Sbjct: 236 NLGQQIKD--ISHSMSVDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYGETLTMVREMGG 293

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +   PD FTLS V+   +E    + GK++H  +IR GL  +V V  SL+DMYAKCT    
Sbjct: 294 ANLKPDSFTLSSVLPLIAENVDISKGKEIHGCSIRQGLDAEVYVASSLIDMYAKCT---R 350

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           V DS +VF  + + + +SW +II G VQ+G  D E +K F  M+  ++ P  ++F+S++ 
Sbjct: 351 VVDSYRVFTLLTERDGISWNSIIAGCVQNGLFD-EGLKFFRQMLMAKIKPKSYSFSSIMP 409

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC +L   ++ +Q++ +  + G   +  + +SL+ MYA+ G +  AR+ F+ +  +++VS
Sbjct: 410 ACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTARQIFDRMRLRDMVS 469

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARI 515
           +  M+   A + ++  A EL  +++  G+  +   F ++L+  S  G + +  +  ++  
Sbjct: 470 WTAMIMGCALHGHALDAIELFEQMKTEGIEPNYVAFMAVLTACSHAGLVDEAWKYFNSMT 529

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAF 544
           +  G       Y A+  +  R   +E A+
Sbjct: 530 LDFGIAPGVEHYAAVSDLLGRAGRLEEAY 558



 Score = 47.8 bits (112), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS-MYSRCANVEAAFQVFKEMED 552
           SLL    SI +  + +Q+HA+++K  F+++     +L+  +YS    +  + ++F  +  
Sbjct: 13  SLLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTLHF 70

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
              ++W S+I  +  HG   ++L  F  MLA G+ P+   + +VL AC+
Sbjct: 71  PPALAWKSVIRCYTSHGLPHKSLGSFIGMLASGLYPDHNVFPSVLKACA 119


>gi|224085073|ref|XP_002307479.1| predicted protein [Populus trichocarpa]
 gi|222856928|gb|EEE94475.1| predicted protein [Populus trichocarpa]
          Length = 1026

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 260/727 (35%), Positives = 412/727 (56%), Gaps = 11/727 (1%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            H   G   +AI     M + G      T   +L +         G LVH+   +  L  N
Sbjct: 302  HAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQGLHSN 361

Query: 113  SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
              + +SL+S+Y+KCG +  A K+F ++ N++++V W++M+  YV  G   + + +F  M 
Sbjct: 362  VYVGSSLVSMYAKCGKMEAAKKVFDTL-NEQNVVLWNAMLGGYVQNGYANEVMELFFNMK 420

Query: 173  ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
              GF P+++ +S+++ AC+  + + +GH ++  ++K   F S++ VG AL+DM+ K    
Sbjct: 421  SCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK-NKFASNLFVGNALVDMYAKSGA- 478

Query: 233  LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            LE A + F+ +  ++ V W ++I    Q     +A  LF  M L G LPD  +L+ ++SA
Sbjct: 479  LEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHLFRRMNLLGILPDEVSLASILSA 538

Query: 293  CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            C+ +     GKQ+H  +++TG    +  G SL+DMYAKC   G++D + K+   M + +V
Sbjct: 539  CASVRGLEQGKQVHCLSVKTGQETKLYSGSSLIDMYAKC---GAIDSAHKILACMPERSV 595

Query: 353  MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            +S  A+I GY Q     ++AV LF DM+   +     TFAS+L AC      N+  Q+++
Sbjct: 596  VSMNALIAGYAQI--NLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHS 653

Query: 413  HAVKRGRALDD-CVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNS 470
              +K G  LDD  +G SL+ MY  S R  DA   F      K+ V +  M+   ++N  S
Sbjct: 654  LILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCS 713

Query: 471  EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
              A +L  E+    V     TF S L   + + +I  G + H+ I  +GF+S+    +AL
Sbjct: 714  VVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTSSAL 773

Query: 531  ISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            + MY++C +V+++ QVFKEM   ++VISW SMI GFAK+G+A  AL +F +M    + P+
Sbjct: 774  VDMYAKCGDVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQSHVTPD 833

Query: 590  GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
             +T++ VL+ACSH+G +SEG   F  M + +G+  R +H ACMVDLLGR GSL EA EFI
Sbjct: 834  DVTFLGVLTACSHSGRVSEGRLIFDMMVNLYGMQPRADHCACMVDLLGRWGSLKEAEEFI 893

Query: 650  RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
              +    D  VW T LGACR+HGD   G+ AAE ++E +PQ+ + ++LLSN+YA++G+W+
Sbjct: 894  NKLNFEPDAKVWATMLGACRIHGDDIRGQQAAEKLIELEPQNSSPYVLLSNIYAASGNWD 953

Query: 710  YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
             V  +R+ M+E+ + K  GCSWI    + + F  G+ SH    EI A L  L   ++E  
Sbjct: 954  EVNTLRREMREKGVKKLPGCSWIVVGQETNMFVAGDKSHHSASEIDAILKDLTPLMREND 1013

Query: 770  YLPDTNF 776
            Y+   +F
Sbjct: 1014 YVVQLDF 1020



 Score =  276 bits (705), Expect = 4e-71,   Method: Compositional matrix adjust.
 Identities = 172/562 (30%), Positives = 300/562 (53%), Gaps = 19/562 (3%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           EP+ V   ++I+ Y   G L+ A+ +F  M N R++V+W+ MIS +   G  V+AI  F 
Sbjct: 258 EPDQVAFVTVINAYVDLGRLDNASDLFSRMPN-RNVVAWNLMISGHAKGGYGVEAIEFFQ 316

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M + G         +V+ A ++   +  G +++   LK G   S+V VG +L+ M+ K 
Sbjct: 317 NMRKAGIKSTRSTLGSVLSAIASLAALDFGLLVHAEALKQG-LHSNVYVGSSLVSMYAKC 375

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              +E+A KVFD + E+N V W  M+    Q G   + + LF +M   GF PD FT S +
Sbjct: 376 G-KMEAAKKVFDTLNEQNVVLWNAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSI 434

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +SAC+ L+    G QLHS  I+   A ++ VG +LVDMYAK    G+++D+R+ F+ + +
Sbjct: 435 LSACACLKYLDLGHQLHSVIIKNKFASNLFVGNALVDMYAK---SGALEDARQQFELIRN 491

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            + +SW  II GYVQ    + EA  LF  M    + P+  + AS+L AC ++      +Q
Sbjct: 492 RDNVSWNVIIVGYVQEED-EVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQ 550

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+  +VK G+      G+SLI MYA+ G ++ A K    + E+++VS N ++  YA+ +N
Sbjct: 551 VHCLSVKTGQETKLYSGSSLIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQ-IN 609

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE-SNHCIYN 528
            E+A  L  ++   G+ ++  TFASLL        +  G QIH+ I+K G +  +  +  
Sbjct: 610 LEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQIHSLILKMGLQLDDEFLGV 669

Query: 529 ALISMYSRCANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           +L+ MY        A  +F E  + ++ + WT+MI+G +++  +  AL+++ +M +  + 
Sbjct: 670 SLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQNDCSVVALQLYKEMRSCNVL 729

Query: 588 PNGITYIAVLSACSHAGLISEGWKH----FRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
           P+  T+++ L AC+    I +G +     F + +D   +       + +VD+  + G + 
Sbjct: 730 PDQATFVSALRACAVVSSIKDGTETHSLIFHTGFDSDELTS-----SALVDMYAKCGDVK 784

Query: 644 EALEFIRSMPLSADVLVWRTFL 665
            +++  + M    DV+ W + +
Sbjct: 785 SSMQVFKEMSRKKDVISWNSMI 806



 Score =  273 bits (698), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 172/551 (31%), Positives = 289/551 (52%), Gaps = 43/551 (7%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  H   G     +    L+   G  P+  T++++L SC R      G+ VH  + +   
Sbjct: 132 LSMHSKQGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGF 191

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E  S    +LI +Y+KC  L +A  IF     + D VSW+SMI  Y+  G   +A+ +F 
Sbjct: 192 ESISYCEGALIGMYAKCNFLTDARSIFDG-AVELDKVSWTSMIGGYIKVGLPEEAVKVFQ 250

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           EM ++G  P++  F  VI A      V +G                              
Sbjct: 251 EMEKVGQEPDQVAFVTVINA-----YVDLGR----------------------------- 276

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              L++A  +F +M  +N V W LMI+   + G   +AI  F +M  +G    R TL  V
Sbjct: 277 ---LDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSV 333

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +SA + L     G  +H+ A++ GL  +V VG SLV MYAKC   G ++ ++KVFD + +
Sbjct: 334 LSAIASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKC---GKMEAAKKVFDTLNE 390

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV+ W A++ GYVQ+G  + E ++LF +M      P+ FT++S+L AC  L   ++  Q
Sbjct: 391 QNVVLWNAMLGGYVQNGYAN-EVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQ 449

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +++  +K   A +  VGN+L+ MYA+SG +EDAR+ FE +  ++ VS+N ++  Y +  +
Sbjct: 450 LHSVIIKNKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEED 509

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +AF L   +   G+     + AS+LS  +S+  + +G+Q+H   +K+G E+     ++
Sbjct: 510 EVEAFHLFRRMNLLGILPDEVSLASILSACASVRGLEQGKQVHCLSVKTGQETKLYSGSS 569

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MY++C  +++A ++   M +R+V+S  ++I G+A+     +A+ +F  ML +GI   
Sbjct: 570 LIDMYAKCGAIDSAHKILACMPERSVVSMNALIAGYAQINL-EQAVNLFRDMLVEGINST 628

Query: 590 GITYIAVLSAC 600
            IT+ ++L AC
Sbjct: 629 EITFASLLDAC 639



 Score =  256 bits (654), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 156/556 (28%), Positives = 287/556 (51%), Gaps = 43/556 (7%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           K++H+   +       V+ N ++ LY+KC D++ A + FK + +K DI++W+S++S +  
Sbjct: 79  KIIHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDK-DILAWNSILSMHSK 137

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
           +G     +  F  +   G  PNE+ F+ V+ +C+  E V  G  ++  ++K G+     C
Sbjct: 138 QGFPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYC 197

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
            G ALI M+ K +  L  A  +FD   E + V WT MI    ++G P +A+++F +M   
Sbjct: 198 EG-ALIGMYAKCNF-LTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKV 255

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           G  PD+     V++A  +L                                      G +
Sbjct: 256 GQEPDQVAFVTVINAYVDL--------------------------------------GRL 277

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           D++  +F RM + NV++W  +I+G+ + GG   EA++ F +M +  +     T  SVL A
Sbjct: 278 DNASDLFSRMPNRNVVAWNLMISGHAK-GGYGVEAIEFFQNMRKAGIKSTRSTLGSVLSA 336

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
             +L   +    V+  A+K+G   +  VG+SL+SMYA+ G+ME A+K F++L E+N+V +
Sbjct: 337 IASLAALDFGLLVHAEALKQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLNEQNVVLW 396

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N M+  Y +N  + +  EL   ++  G     +T++S+LS  + +  +  G Q+H+ IIK
Sbjct: 397 NAMLGGYVQNGYANEVMELFFNMKSCGFYPDDFTYSSILSACACLKYLDLGHQLHSVIIK 456

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           + F SN  + NAL+ MY++   +E A Q F+ + +R+ +SW  +I G+ +      A  +
Sbjct: 457 NKFASNLFVGNALVDMYAKSGALEDARQQFELIRNRDNVSWNVIIVGYVQEEDEVEAFHL 516

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M   GI P+ ++  ++LSAC+    + +G K    +  + G   ++   + ++D+  
Sbjct: 517 FRRMNLLGILPDEVSLASILSACASVRGLEQG-KQVHCLSVKTGQETKLYSGSSLIDMYA 575

Query: 638 RSGSLTEALEFIRSMP 653
           + G++  A + +  MP
Sbjct: 576 KCGAIDSAHKILACMP 591



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/370 (26%), Positives = 169/370 (45%), Gaps = 45/370 (12%)

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
           T+ K +H+ +++ G      +G  +VD+YAKC     VD + + F ++ D ++++W +I+
Sbjct: 76  TTNKIIHAQSLKLGFWSKGVLGNVIVDLYAKC---ADVDYAERAFKQLEDKDILAWNSIL 132

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG- 418
           + + + G      VK F  +    V PN FTFA VL +C  L       QV+ + VK G 
Sbjct: 133 SMHSKQG-FPHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGF 191

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
            ++  C G +LI MYA+   + DAR  F+   E + VS+ +M+  Y K    E+A ++  
Sbjct: 192 ESISYCEG-ALIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQ 250

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           E+E  G                                    E +   +  +I+ Y    
Sbjct: 251 EMEKVGQ-----------------------------------EPDQVAFVTVINAYVDLG 275

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            ++ A  +F  M +RNV++W  MI+G AK G+   A+E F  M   GIK    T  +VLS
Sbjct: 276 RLDNASDLFSRMPNRNVVAWNLMISGHAKGGYGVEAIEFFQNMRKAGIKSTRSTLGSVLS 335

Query: 599 ACSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           A +    +  G   H  ++  + G+   +   + +V +  + G +  A +   ++    +
Sbjct: 336 AIASLAALDFGLLVHAEAL--KQGLHSNVYVGSSLVSMYAKCGKMEAAKKVFDTLN-EQN 392

Query: 658 VLVWRTFLGA 667
           V++W   LG 
Sbjct: 393 VVLWNAMLGG 402



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 75/266 (28%), Positives = 131/266 (49%), Gaps = 4/266 (1%)

Query: 40  PTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKL 99
           P  S    N LI       +++A+     M  +G +    T++ LL +C   +  +LG+ 
Sbjct: 591 PERSVVSMNALIAGYAQINLEQAVNLFRDMLVEGINSTEITFASLLDACHEQQKLNLGRQ 650

Query: 100 VHSLLTRSKLEPNSVILN-SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
           +HSL+ +  L+ +   L  SL+ +Y       +A+ +F    N +  V W++MIS     
Sbjct: 651 IHSLILKMGLQLDDEFLGVSLLGMYMNSLRTTDASVLFSEFSNPKSAVVWTAMISGLSQN 710

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
              V A+ ++ EM      P++  F + +RAC+   ++  G   +  +   G FDSD   
Sbjct: 711 DCSVVALQLYKEMRSCNVLPDQATFVSALRACAVVSSIKDGTETHSLIFHTG-FDSDELT 769

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
             AL+DM+ K   D++S+ +VF +M+ +K+ + W  MI    + G   DA+R+F +M  S
Sbjct: 770 SSALVDMYAKCG-DVKSSMQVFKEMSRKKDVISWNSMIVGFAKNGYAEDALRVFDEMKQS 828

Query: 278 GFLPDRFTLSGVVSACSELELFTSGK 303
              PD  T  GV++ACS     + G+
Sbjct: 829 HVTPDDVTFLGVLTACSHSGRVSEGR 854



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 79/321 (24%), Positives = 157/321 (48%), Gaps = 13/321 (4%)

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++  ++K G      +GN ++ +YA+   ++ A +AF+ L +K+++++N+++  ++K   
Sbjct: 81  IHAQSLKLGFWSKGVLGNVIVDLYAKCADVDYAERAFKQLEDKDILAWNSILSMHSKQGF 140

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
                +    + ++GV  + +TFA +LS  + +  +  G Q+H  ++K GFES      A
Sbjct: 141 PHLVVKYFGLLWNSGVWPNEFTFAIVLSSCARLEMVKCGRQVHCNVVKMGFESISYCEGA 200

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MY++C  +  A  +F    + + +SWTSMI G+ K G    A+++F +M   G +P+
Sbjct: 201 LIGMYAKCNFLTDARSIFDGAVELDKVSWTSMIGGYIKVGLPEEAVKVFQEMEKVGQEPD 260

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            + ++ V++A    G +      F  M + + +      +  M+    + G   EA+EF 
Sbjct: 261 QVAFVTVINAYVDLGRLDNASDLFSRMPNRNVVA-----WNLMISGHAKGGYGVEAIEFF 315

Query: 650 RSMPLSADVLVWRTFLG------ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           ++M   A +   R+ LG      A     D  L  H AE + +    +      L ++YA
Sbjct: 316 QNMR-KAGIKSTRSTLGSVLSAIASLAALDFGLLVH-AEALKQGLHSNVYVGSSLVSMYA 373

Query: 704 SAGHWEYVANIRKRMKERNLI 724
             G  E    +   + E+N++
Sbjct: 374 KCGKMEAAKKVFDTLNEQNVV 394


>gi|115466812|ref|NP_001057005.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|55773756|dbj|BAD72439.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113595045|dbj|BAF18919.1| Os06g0185800 [Oryza sativa Japonica Group]
 gi|125596288|gb|EAZ36068.1| hypothetical protein OsJ_20378 [Oryza sativa Japonica Group]
          Length = 787

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/650 (38%), Positives = 383/650 (58%), Gaps = 13/650 (2%)

Query: 215 DVCVGCALIDM-FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           D  V  AL  + FV   VD   A KVFD +   +TV W  ++   +      +A+  F  
Sbjct: 148 DTFVASALAKLYFVLSRVD--HARKVFDTVPSPDTVLWNTLLAGLSG----SEAVESFAR 201

Query: 274 MILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           M+  G + PD  TL+ V+ A +E+   T G+ +HS+A + GLA    V   L+ +Y+KC 
Sbjct: 202 MVCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHEHVLTGLISLYSKC- 260

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G V+ +R +FD M   +++++ A+I+GY    G    +V LF++++   + PN  T  
Sbjct: 261 --GDVESARCLFDMMEKPDLVAYNALISGY-SVNGMVGSSVNLFTELMTLGLWPNSSTLV 317

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           +++          +A+ ++   +K G   +  V  ++ +++ R   ME ARKAF+++ EK
Sbjct: 318 ALIPVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLNDMESARKAFDTMPEK 377

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
            + S+N M+  YA+N  +E A  L  ++    V  +  T +S LS  + +GA+  G+ +H
Sbjct: 378 TMESWNAMISGYAQNGLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWLH 437

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
             I +   E N  +  ALI MY++C ++  A ++F  M+++NV+SW +MI G+  HG  A
Sbjct: 438 RIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQGA 497

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            AL+++  ML   + P   T+++VL ACSH GL+ EGWK FRSM D++ I   +EH  CM
Sbjct: 498 EALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIEHCTCM 557

Query: 633 VDLLGRSGSLTEALEFIRSMPLSA-DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           VDLLGR+G L EA E I   P SA    VW   LGAC VH D++L K A++ + E DP++
Sbjct: 558 VDLLGRAGQLKEAFELISEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFELDPEN 617

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              ++LLSNL+ S   +   A +R+  K R L+K  G + IE  NK H F  G+ +HP++
Sbjct: 618 SGYYVLLSNLHTSKKQYSEAAVVRQEAKSRKLVKTPGYTLIEIGNKPHVFMAGDRAHPQS 677

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
             IY+ L++L  K+ E GY P+T   L+++EEE+K   +  HSEK+A+AFGL+ST     
Sbjct: 678 EAIYSYLEKLTAKMIEAGYRPETEAALYDVEEEEKEHMVKVHSEKLAIAFGLLSTEPGTE 737

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IR+ KNLRVC DCH A K+IS VT R IV+RD++RFHH +DG CSC DYW
Sbjct: 738 IRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 787



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 149/467 (31%), Positives = 238/467 (50%), Gaps = 37/467 (7%)

Query: 36  FIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNF 94
           F   P+    L N L+  L+     +A+ +   M   G+  PD  T + +L +     + 
Sbjct: 172 FDTVPSPDTVLWNTLLAGLSG---SEAVESFARMVCDGSVRPDATTLASVLPAAAEVADV 228

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            +G+ VHS   +  L  +  +L  LISLYSKCGD+  A  +F  M  K D+V+++++IS 
Sbjct: 229 TMGRCVHSFAEKCGLAEHEHVLTGLISLYSKCGDVESARCLFDMM-EKPDLVAYNALISG 287

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G    ++++F E++ LG  PN     A+I   S   +  +   ++GF+LK G F +
Sbjct: 288 YSVNGMVGSSVNLFTELMTLGLWPNSSTLVALIPVHSPFGHDLLAQCLHGFVLKSG-FTA 346

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           +  V  A+  +  + + D+ESA K FD M EK    W  MI+   Q G    A+ LF  M
Sbjct: 347 NSPVSTAITTLHCRLN-DMESARKAFDTMPEKTMESWNAMISGYAQNGLTEMAVALFEQM 405

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +     P+  T+S  +SAC++L   + GK LH       L  +V V  +L+DMYAKC   
Sbjct: 406 VKLNVRPNPITISSTLSACAQLGALSLGKWLHRIITEEDLEPNVYVMTALIDMYAKC--- 462

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           GS+ ++R++F+ M + NV+SW A+I GY    G+  EA+KL+ DM+   + P   TF SV
Sbjct: 463 GSISEARRIFNTMDNKNVVSWNAMIAGY-GLHGQGAEALKLYKDMLDAHLLPTSATFLSV 521

Query: 395 LKAC--GNLLDSN---VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE-- 447
           L AC  G L++            +A+  G  ++ C    ++ +  R+G++   ++AFE  
Sbjct: 522 LYACSHGGLVEEGWKVFRSMTDDYAINPG--IEHC--TCMVDLLGRAGQL---KEAFELI 574

Query: 448 SLFEKNLVSYNT--------MV--DAYAKNLNSEKAFELLHEIEDTG 484
           S F K+ V            MV  D+    L S+K FEL  + E++G
Sbjct: 575 SEFPKSAVGPGVWGALLGACMVHKDSDLAKLASQKLFEL--DPENSG 619



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 220/450 (48%), Gaps = 21/450 (4%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++ + ++L  LY     ++ A K+F ++ +  D V W+++++         +A+  F  M
Sbjct: 148 DTFVASALAKLYFVLSRVDHARKVFDTVPSP-DTVLWNTLLAGLSGS----EAVESFARM 202

Query: 172 LELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           +  G   P+    ++V+ A +   +V +G  ++ F  KCG  + +  V   LI ++ K  
Sbjct: 203 VCDGSVRPDATTLASVLPAAAEVADVTMGRCVHSFAEKCGLAEHE-HVLTGLISLYSKCG 261

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
            D+ESA  +FD M + + V +  +I+  +  G    ++ LF +++  G  P+  TL  ++
Sbjct: 262 -DVESARCLFDMMEKPDLVAYNALISGYSVNGMVGSSVNLFTELMTLGLWPNSSTLVALI 320

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
              S        + LH + +++G   +  V  ++  ++ +      ++ +RK FD M + 
Sbjct: 321 PVHSPFGHDLLAQCLHGFVLKSGFTANSPVSTAITTLHCRLN---DMESARKAFDTMPEK 377

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
            + SW A+I+GY Q+ G  + AV LF  M++  V PN  T +S L AC  L   ++ + +
Sbjct: 378 TMESWNAMISGYAQN-GLTEMAVALFEQMVKLNVRPNPITISSTLSACAQLGALSLGKWL 436

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +    +     +  V  +LI MYA+ G + +AR+ F ++  KN+VS+N M+  Y  +   
Sbjct: 437 HRIITEEDLEPNVYVMTALIDMYAKCGSISEARRIFNTMDNKNVVSWNAMIAGYGLHGQG 496

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHC 525
            +A +L  ++ D  +  ++ TF S+L   S  G + +G ++   +     I  G E  HC
Sbjct: 497 AEALKLYKDMLDAHLLPTSATFLSVLYACSHGGLVEEGWKVFRSMTDDYAINPGIE--HC 554

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNV 555
               ++ +  R   ++ AF++  E     V
Sbjct: 555 --TCMVDLLGRAGQLKEAFELISEFPKSAV 582


>gi|359483655|ref|XP_003632994.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Vitis vinifera]
          Length = 613

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/560 (41%), Positives = 355/560 (63%), Gaps = 4/560 (0%)

Query: 303 KQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           +Q+H+++IR G+ L +  +G  L+  +   +    +  + ++F ++ + N+ +W  +I G
Sbjct: 57  RQIHAFSIRHGVPLTNPDMGKYLI--FTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRG 114

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y +S      A++L+  M    + P+  T+  +LKA   L+D    E+V++ A++ G   
Sbjct: 115 YAESEN-PMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFES 173

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              V N+L+ MYA  G  E A K FE + E+NLV++N++++ YA N    +A  L  E+ 
Sbjct: 174 LVFVQNTLVHMYAACGHAESAHKLFELMAERNLVTWNSVINGYALNGRPNEALTLFREMG 233

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV    +T  SLLS  + +GA+  G + H  ++K G + N    NAL+ +Y++C ++ 
Sbjct: 234 LRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIR 293

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF EME+++V+SWTS+I G A +GF   ALE+F ++   G+ P+ IT++ VL ACS
Sbjct: 294 QAHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACS 353

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H G++ EG+ +F+ M +E+GIV ++EHY CMVDLLGR+G + +A EFI++MP+  + +VW
Sbjct: 354 HCGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVW 413

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           RT LGAC +HG   LG+ A   +L+ +P+    ++LLSNLYAS   W  V  +R+ M   
Sbjct: 414 RTLLGACTIHGHLALGEVARAQLLQLEPKHSGDYVLLSNLYASEQRWSDVHKVRRTMLRE 473

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + K  G S +E  N++H+F +G+ SHP+T EIY +L ++   +K  GY+P  + VL ++
Sbjct: 474 GVKKTPGHSLVELRNRLHEFVMGDRSHPQTEEIYVKLAEITKLLKLEGYVPHISNVLADI 533

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EEE+K   L  HSEKIA+AF LI+T+   PIRV KNLRVC DCH AIK IS V  REIV+
Sbjct: 534 EEEEKETALSYHSEKIAIAFMLINTAAGIPIRVVKNLRVCADCHLAIKLISKVFDREIVV 593

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD +RFHH KDG CSC DYW
Sbjct: 594 RDRSRFHHFKDGHCSCKDYW 613



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 182/373 (48%), Gaps = 6/373 (1%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+ F ++ G   ++  +G  LI   +     +  A+++F ++   N   W  MI    + 
Sbjct: 59  IHAFSIRHGVPLTNPDMGKYLIFTLLSFCSPMSYAHQIFSQIQNPNIFTWNTMIRGYAES 118

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
             P  A+ L+  M +S   PD  T   ++ A ++L     G+++HS AIR G    V V 
Sbjct: 119 ENPMPALELYRQMHVSCIEPDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQ 178

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +LV MYA C   G  + + K+F+ M + N+++W ++I GY  + GR  EA+ LF +M  
Sbjct: 179 NTLVHMYAAC---GHAESAHKLFELMAERNLVTWNSVINGYALN-GRPNEALTLFREMGL 234

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V P+ FT  S+L AC  L    +  + + + VK G   +   GN+L+ +YA+ G +  
Sbjct: 235 RGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDGNLHAGNALLDLYAKCGSIRQ 294

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A K F+ + EK++VS+ +++   A N   ++A EL  E+E  G+  S  TF  +L   S 
Sbjct: 295 AHKVFDEMEEKSVVSWTSLIVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSH 354

Query: 502 IGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWT 559
            G + +G     R+ +  G       Y  ++ +  R   V+ A +  + M    N + W 
Sbjct: 355 CGMVDEGFDYFKRMKEEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWR 414

Query: 560 SMITGFAKHGFAA 572
           +++     HG  A
Sbjct: 415 TLLGACTIHGHLA 427



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 189/350 (54%), Gaps = 15/350 (4%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           + +L S C  ++ A++IF  + N  +I +W++MI  Y      + A+ ++ +M      P
Sbjct: 80  IFTLLSFCSPMSYAHQIFSQIQNP-NIFTWNTMIRGYAESENPMPALELYRQMHVSCIEP 138

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           + + +  +++A +   +V  G  ++   ++ G F+S V V   L+ M+       ESA+K
Sbjct: 139 DTHTYPFLLKAIAKLMDVREGEKVHSIAIRNG-FESLVFVQNTLVHMYAACG-HAESAHK 196

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +F+ M E+N V W  +I      G P +A+ LF +M L G  PD FT+  ++SAC+EL  
Sbjct: 197 LFELMAERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGA 256

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G++ H + ++ GL  ++  G +L+D+YAKC   GS+  + KVFD M + +V+SWT++
Sbjct: 257 LALGRRAHVYMVKVGLDGNLHAGNALLDLYAKC---GSIRQAHKVFDEMEEKSVVSWTSL 313

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVK 416
           I G +   G  KEA++LF ++ +  + P+  TF  VL AC +  ++D       Y   +K
Sbjct: 314 IVG-LAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEGFD---YFKRMK 369

Query: 417 RGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
               +   + +   ++ +  R+G ++ A +  +++  + N V + T++ A
Sbjct: 370 EEYGIVPKIEHYGCMVDLLGRAGLVKQAHEFIQNMPMQPNAVVWRTLLGA 419



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 74/228 (32%), Positives = 129/228 (56%), Gaps = 5/228 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  LLK+  +  +   G+ VHS+  R+  E    + N+L+ +Y+ CG    A+K+
Sbjct: 138 PDTHTYPFLLKAIAKLMDVREGEKVHSIAIRNGFESLVFVQNTLVHMYAACGHAESAHKL 197

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ M  +R++V+W+S+I+ Y   G+  +A+ +F EM   G  P+ +   +++ AC+    
Sbjct: 198 FELMA-ERNLVTWNSVINGYALNGRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGA 256

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +A+G   + +++K G  D ++  G AL+D++ K GS+    A+KVFD+M EK+ V WT +
Sbjct: 257 LALGRRAHVYMVKVG-LDGNLHAGNALLDLYAKCGSI--RQAHKVFDEMEEKSVVSWTSL 313

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           I      G  ++A+ LF ++   G +P   T  GV+ ACS   +   G
Sbjct: 314 IVGLAVNGFGKEALELFKELERKGLMPSEITFVGVLYACSHCGMVDEG 361



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 63/219 (28%), Positives = 105/219 (47%), Gaps = 18/219 (8%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN GR  +A+     M  +G  PD  T   LL +C       LG+  H  + +  L+ 
Sbjct: 216 YALN-GRPNEALTLFREMGLRGVEPDGFTMVSLLSACAELGALALGRRAHVYMVKVGLDG 274

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N    N+L+ LY+KCG + +A+K+F  M  ++ +VSW+S+I      G   +A+ +F E+
Sbjct: 275 NLHAGNALLDLYAKCGSIRQAHKVFDEM-EEKSVVSWTSLIVGLAVNGFGKEALELFKEL 333

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALID 224
              G  P+E  F  V+ ACS+   V  G          YG + K  ++      GC ++D
Sbjct: 334 ERKGLMPSEITFVGVLYACSHCGMVDEGFDYFKRMKEEYGIVPKIEHY------GC-MVD 386

Query: 225 MFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLG 262
           +  +  + ++ A++    M  + N V W  ++  CT  G
Sbjct: 387 LLGRAGL-VKQAHEFIQNMPMQPNAVVWRTLLGACTIHG 424


>gi|357116318|ref|XP_003559929.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Brachypodium distachyon]
          Length = 646

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 238/588 (40%), Positives = 356/588 (60%), Gaps = 12/588 (2%)

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT--------VDGS 336
           +L G + +C+ L L   G  LH+ A+R+G   D     +L+++Y K          +DGS
Sbjct: 60  SLPGALKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGS 119

Query: 337 ---VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
              ++  RKVFD M + +V+SW  ++ G  +SG R  EA+ L  +M +    P+ FT +S
Sbjct: 120 AVVLESVRKVFDEMPEKDVVSWNTLVLGCAESG-RHGEALGLVREMWRDGCKPDSFTLSS 178

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           VL       D     +++  A + G   D  VG+SLI MYA   R + + K F++L  ++
Sbjct: 179 VLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRD 238

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
            + +N+M+   A+N + ++A  L   +  +G+     TF+SL+    ++ ++  G+Q+HA
Sbjct: 239 AILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHA 298

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
            +I+ GF+ N  I ++LI MY +C NV  A ++F  ++  +++SWT+MI G A HG A  
Sbjct: 299 YVIRGGFDGNVFISSSLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPARE 358

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           AL +F +M    +KPN IT++AVL+ACSHAGL+ +GWK+F SM D +GIV  +EH+A + 
Sbjct: 359 ALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAALA 418

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA 693
           D LGR G L EA  FI  M +     VW T L AC+VH +T L +  A+ I + +P+   
Sbjct: 419 DTLGRPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIFDLEPRSMG 478

Query: 694 AHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLE 753
           +HI+LSN Y+S+G W   A++RK M+++ + KE  CSWIE  NK H F   + SHP    
Sbjct: 479 SHIILSNTYSSSGRWNEAAHLRKSMRKKGMQKEPACSWIEVKNKQHVFVAHDKSHPWYER 538

Query: 754 IYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIR 813
           I   L+  + ++   GY+P+T+ V  ++EEEQK   L  HSEK+A+ FG+IST     IR
Sbjct: 539 IIDALNVFSEQMVRQGYVPNTDDVFQDIEEEQKNSVLCGHSEKLAIVFGIISTPPGTTIR 598

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           V KNLRVC DCHT  K+IS + GREIV+RD+NRFHH KDG CSC D+W
Sbjct: 599 VMKNLRVCVDCHTVTKFISKIVGREIVMRDANRFHHFKDGICSCGDFW 646



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 132/422 (31%), Positives = 208/422 (49%), Gaps = 39/422 (9%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD--------------LN 130
           LKSC       LG  +H+L  RS    +    N+L++LY K                 L 
Sbjct: 65  LKSCAALGLRALGASLHALALRSGAFADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLE 124

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
              K+F  M  K D+VSW++++      G+  +A+ +  EM   G  P+ +  S+V+   
Sbjct: 125 SVRKVFDEMPEK-DVVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIF 183

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
           +   +V  G  ++GF  + G+ D DV VG +LIDM+       + + KVFD +  ++ + 
Sbjct: 184 AEGADVRRGMELHGFATRNGFHD-DVFVGSSLIDMYAN-CTRTDYSVKVFDNLPVRDAIL 241

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  M+  C Q G   +A+ LF  M+ SG  P   T S ++ AC  L     GKQLH++ I
Sbjct: 242 WNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVI 301

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           R G   +V +  SL+DMY KC   G+V  +R++FDR+   +++SWTA+I G+   G   +
Sbjct: 302 RGGFDGNVFISSSLIDMYCKC---GNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPA-R 357

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDS-----NVAEQVY--THAVKRGRAL 421
           EA+ LF  M  G + PNH TF +VL AC    L+D      N     Y    +++   AL
Sbjct: 358 EALVLFDRMELGNLKPNHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPSLEHHAAL 417

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-YNTMVDAYAKNLNSEKAFELLHEI 480
            D +G        R G++E+A      +  K   S ++T++ A   + N+  A E+  +I
Sbjct: 418 ADTLG--------RPGKLEEAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKI 469

Query: 481 ED 482
            D
Sbjct: 470 FD 471



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 140/503 (27%), Positives = 240/503 (47%), Gaps = 42/503 (8%)

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV------IRACSNTENVAIGH 200
           SW+  I    ++G    AI +F+ M      P   C S +      +++C+     A+G 
Sbjct: 21  SWAHQIRVAASQGDFHHAIALFLRMRASD--PAAACSSVLTSLPGALKSCAALGLRALGA 78

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-------------GSVDLESAYKVFDKMTEKN 247
            ++   L+ G F +D     AL++++ K              +V LES  KVFD+M EK+
Sbjct: 79  SLHALALRSGAF-ADRFAANALLNLYCKLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKD 137

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  ++  C + G   +A+ L  +M   G  PD FTLS V+   +E      G +LH 
Sbjct: 138 VVSWNTLVLGCAESGRHGEALGLVREMWRDGCKPDSFTLSSVLPIFAEGADVRRGMELHG 197

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           +A R G   DV VG SL+DMYA CT     D S KVFD +   + + W +++ G  Q+G 
Sbjct: 198 FATRNGFHDDVFVGSSLIDMYANCT---RTDYSVKVFDNLPVRDAILWNSMLAGCAQNGS 254

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
            D EA+ LF  M+   + P   TF+S++ ACGNL    + +Q++ + ++ G   +  + +
Sbjct: 255 VD-EALGLFRRMLHSGIKPMPVTFSSLIPACGNLASLLLGKQLHAYVIRGGFDGNVFISS 313

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           SLI MY + G +  AR+ F+ +   ++VS+  M+  +A +  + +A  L   +E   +  
Sbjct: 314 SLIDMYCKCGNVSIARRIFDRIQSPDIVSWTAMIMGHALHGPAREALVLFDRMELGNLKP 373

Query: 488 SAYTFASLLSGASSIGAIGKGEQI------HARIIKSGFESNHCIYNALISMYSRCANVE 541
           +  TF ++L+  S  G + KG +       H  I+ S  E     + AL     R   +E
Sbjct: 374 NHITFLAVLTACSHAGLVDKGWKYFNSMSDHYGIVPS-LEH----HAALADTLGRPGKLE 428

Query: 542 AAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLSA 599
            A+     M+ +   S W++++     H     A E+  K+    ++P  + ++I + + 
Sbjct: 429 EAYNFISGMKIKPTASVWSTLLRACKVHKNTVLAEEVAKKIF--DLEPRSMGSHIILSNT 486

Query: 600 CSHAGLISEGWKHFRSMYDEHGI 622
            S +G  +E   H R    + G+
Sbjct: 487 YSSSGRWNEA-AHLRKSMRKKGM 508



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 197/452 (43%), Gaps = 56/452 (12%)

Query: 11  KIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLND-GRVQKAIFTLDLM 69
           K+P P S  P       +  S    F   P       N L+    + GR  +A+  +  M
Sbjct: 105 KLPAPPSHSPEMDGSAVVLESVRKVFDEMPEKDVVSWNTLVLGCAESGRHGEALGLVREM 164

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
            + G  PD  T S +L       +   G  +H   TR+    +  + +SLI +Y+ C   
Sbjct: 165 WRDGCKPDSFTLSSVLPIFAEGADVRRGMELHGFATRNGFHDDVFVGSSLIDMYANCTRT 224

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
           + + K+F ++   RD + W+SM++     G   +A+ +F  ML  G  P    FS++I A
Sbjct: 225 DYSVKVFDNL-PVRDAILWNSMLAGCAQNGSVDEALGLFRRMLHSGIKPMPVTFSSLIPA 283

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNT 248
           C N  ++ +G  ++ ++++ G FD +V +  +LIDM+ K G+V +  A ++FD++   + 
Sbjct: 284 CGNLASLLLGKQLHAYVIRGG-FDGNVFISSSLIDMYCKCGNVSI--ARRIFDRIQSPDI 340

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V WT MI      G  R+A+ LF  M L    P+  T   V++ACS              
Sbjct: 341 VSWTAMIMGHALHGPAREALVLFDRMELGNLKPNHITFLAVLTACSHA------------ 388

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH----NVMSWTAIITGYVQ 364
                                     G VD   K F+ M DH      +   A +   + 
Sbjct: 389 --------------------------GLVDKGWKYFNSMSDHYGIVPSLEHHAALADTLG 422

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
             G+ +EA    S M   ++ P    ++++L+AC    ++ +AE+V   A K        
Sbjct: 423 RPGKLEEAYNFISGM---KIKPTASVWSTLLRACKVHKNTVLAEEV---AKKIFDLEPRS 476

Query: 425 VGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
           +G+ +I  + Y+ SGR  +A    +S+ +K +
Sbjct: 477 MGSHIILSNTYSSSGRWNEAAHLRKSMRKKGM 508


>gi|224089505|ref|XP_002308737.1| predicted protein [Populus trichocarpa]
 gi|222854713|gb|EEE92260.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  466 bits (1200), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 229/575 (39%), Positives = 365/575 (63%), Gaps = 7/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++  C+ L     GK +H+  + +    D+ +  +L+++YAKC   G +  +RK+FD M 
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKC---GDLVYARKLFDEMS 77

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +V++WTA+ITGY Q   R ++A+ L  +M++  + PN FT AS+LKA   +  ++V +
Sbjct: 78  SRDVVTWTALITGYSQHD-RPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQ 136

Query: 409 --QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             Q++   ++ G   +  V  +++ MYAR   +E+A+  F+ +  KN VS+N ++  YA+
Sbjct: 137 GRQLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYAR 196

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
               +KAF L   +    V  + +T++S+L   +S+G++ +G+ +HA +IK G +    +
Sbjct: 197 KGQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFV 256

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            N L+ MY++  ++E A +VF  +  R+V+SW SM+TG+++HG    AL+ F +ML   I
Sbjct: 257 GNTLLDMYAKSGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
            PN IT++ VL+ACSHAGL+ EG +H+  M  ++ +  ++ HY  MVDLLGR+G L  A+
Sbjct: 317 APNDITFLCVLTACSHAGLLDEG-RHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAI 375

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           +FI  MP+     VW   LGACR+H + ELG +AAE I E D   P  H+LL N+YA AG
Sbjct: 376 QFISEMPIKPTAAVWGALLGACRMHKNMELGGYAAECIFELDSHYPGTHVLLYNIYALAG 435

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W   A +RK MKE  + KE  CSW+E +N+VH F   + +HP+  EI+   +Q++ KIK
Sbjct: 436 RWNDAAKVRKMMKESGVKKEPACSWVEMENEVHVFVADDDAHPQRREIHNMWEQISDKIK 495

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+PD++ VL  ++++++   L  HSEK+A+AF L++T     IR+ KN+R+CGDCH+
Sbjct: 496 EIGYVPDSSHVLLCMDQQEREAKLQYHSEKLALAFALLNTPPGSTIRIKKNIRICGDCHS 555

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A K++S +  REI++RD+NRFHH  DG CSC DYW
Sbjct: 556 AFKFVSKLVEREIIVRDTNRFHHFCDGACSCEDYW 590



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 158/536 (29%), Positives = 263/536 (49%), Gaps = 87/536 (16%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LLK C      + GK++H+LL  S+   + V+ N+L++LY+KCGDL  A K+F  M + R
Sbjct: 21  LLKRCTHLNKLNEGKIIHALLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSS-R 79

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN--TENVAIGHI 201
           D+V+W+++I+ Y    +  DA+ +  EML +G  PN++  +++++A S   + +V  G  
Sbjct: 80  DVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQ 139

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++G  L+ GY DS+V V CA++DM+ +    LE A  +FD M  KN V W  +I    + 
Sbjct: 140 LHGLCLRYGY-DSNVYVSCAILDMYARCH-HLEEAQLIFDVMVSKNEVSWNALIAGYARK 197

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G    A  LF +M+     P  FT S V+ AC+ +     GK +H+  I+ G  L   VG
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +L+DMYAK    GS++D++KVFDR+   +V+SW +++TGY Q  G  K A++ F +M++
Sbjct: 258 NTLLDMYAK---SGSIEDAKKVFDRLAKRDVVSWNSMLTGYSQH-GLGKVALQRFEEMLR 313

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
            ++APN  TF  VL AC             +HA                      G +++
Sbjct: 314 TRIAPNDITFLCVLTAC-------------SHA----------------------GLLDE 338

Query: 442 ARKAFESL----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            R  F+ +     E  +  Y TMVD   +  + ++A + + E+    +  +A  + +LL 
Sbjct: 339 GRHYFDMMKKYNVEPQISHYVTMVDLLGRAGHLDRAIQFISEMP---IKPTAAVWGALLG 395

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYN----------ALISMYSRCANVEAAFQVF 547
                       ++H  +   G+ +  CI+            L ++Y+       A +V 
Sbjct: 396 AC----------RMHKNMELGGYAAE-CIFELDSHYPGTHVLLYNIYALAGRWNDAAKVR 444

Query: 548 KEMEDRNV-----ISWTSMITGFAKHGFAA--------RALEIFYKMLADGIKPNG 590
           K M++  V      SW  M      H F A        R +   ++ ++D IK  G
Sbjct: 445 KMMKESGVKKEPACSWVEMENEV--HVFVADDDAHPQRREIHNMWEQISDKIKEIG 498



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 163/298 (54%), Gaps = 11/298 (3%)

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFE 451
           ++LK C +L   N  + ++   +   R  DD V  N+L+++YA+ G +  ARK F+ +  
Sbjct: 20  TLLKRCTHLNKLNEGKIIHA-LLLNSRFRDDLVMQNTLLNLYAKCGDLVYARKLFDEMSS 78

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA--IGKGE 509
           +++V++  ++  Y+++   + A  LL E+   G+  + +T ASLL  AS +G+  + +G 
Sbjct: 79  RDVVTWTALITGYSQHDRPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGR 138

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           Q+H   ++ G++SN  +  A++ MY+RC ++E A  +F  M  +N +SW ++I G+A+ G
Sbjct: 139 QLHGLCLRYGYDSNVYVSCAILDMYARCHHLEEAQLIFDVMVSKNEVSWNALIAGYARKG 198

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIVQRMEH 628
              +A  +F  ML + +KP   TY +VL AC+  G + +G W H   +     +V  + +
Sbjct: 199 QGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVGN 258

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
              ++D+  +SGS+ +A +    +    DV+ W + L     HG   LGK A +   E
Sbjct: 259 --TLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHG---LGKVALQRFEE 310



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/249 (30%), Positives = 132/249 (53%), Gaps = 5/249 (2%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLK--SCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           R Q A+  L  M + G  P+  T + LLK  S + S +   G+ +H L  R   + N  +
Sbjct: 96  RPQDALLLLPEMLRIGLKPNQFTLASLLKAASGVGSTDVLQGRQLHGLCLRYGYDSNVYV 155

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +++ +Y++C  L EA  IF  M +K + VSW+++I+ Y  +G+   A  +F  ML   
Sbjct: 156 SCAILDMYARCHHLEEAQLIFDVMVSKNE-VSWNALIAGYARKGQGDKAFCLFSNMLREN 214

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P  + +S+V+ AC++  ++  G  ++  ++K G       VG  L+DM+ K S  +E 
Sbjct: 215 VKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGE-KLVAFVGNTLLDMYAK-SGSIED 272

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A KVFD++ +++ V W  M+T  +Q G  + A++ F +M+ +   P+  T   V++ACS 
Sbjct: 273 AKKVFDRLAKRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRIAPNDITFLCVLTACSH 332

Query: 296 LELFTSGKQ 304
             L   G+ 
Sbjct: 333 AGLLDEGRH 341



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 59/224 (26%), Positives = 104/224 (46%), Gaps = 14/224 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+  KA      M ++   P   TYS +L +C    +   GK VH+L+ +   +  + + 
Sbjct: 198 GQGDKAFCLFSNMLRENVKPTHFTYSSVLCACASMGSLEQGKWVHALMIKWGEKLVAFVG 257

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+ +Y+K G + +A K+F  +  KRD+VSW+SM++ Y   G    A+  F EML    
Sbjct: 258 NTLLDMYAKSGSIEDAKKVFDRLA-KRDVVSWNSMLTGYSQHGLGKVALQRFEEMLRTRI 316

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN+  F  V+ ACS+   +  G   +  + K    +  +     ++D+  +    L+ A
Sbjct: 317 APNDITFLCVLTACSHAGLLDEGRHYFDMMKKYN-VEPQISHYVTMVDLLGRAG-HLDRA 374

Query: 237 YKVFDKMTEKNTVG-WTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            +   +M  K T   W  ++  C          R+  +M L G+
Sbjct: 375 IQFISEMPIKPTAAVWGALLGAC----------RMHKNMELGGY 408


>gi|296090147|emb|CBI39966.3| unnamed protein product [Vitis vinifera]
          Length = 726

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/723 (35%), Positives = 405/723 (56%), Gaps = 44/723 (6%)

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
           C  +  FS++ RA ++       H ++  ++  G   S V     LI  +     D  S+
Sbjct: 10  CSRQTLFSSISRALASAATTTQLHKLHSLIITLGLHHS-VIFSAKLIAKYAHFR-DPTSS 67

Query: 237 YKVFDKMTEKNTVG-WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           + VF   +  N V  W  +I   T  G   +A+ L+ +       PD +T   V++AC+ 
Sbjct: 68  FSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVINACAG 127

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L  F   K +H   +  G   D+ +G +L+DMY +      +D +RKVF+ M   +V+SW
Sbjct: 128 LLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFN---DLDKARKVFEEMPLRDVVSW 184

Query: 356 TAIITGYVQSGGRDK------EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            ++I+GY  +G  ++      +++KLF +M+  Q  P+  T  S+L+ACG+L D    + 
Sbjct: 185 NSLISGYNANGYWNEALEIYYQSIKLFMEMVN-QFKPDLLTITSILQACGHLGDLEFGKY 243

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL- 468
           V+ + +  G   D    N LI+MYA+ G +  +++ F  +  K+ VS+N+M++ Y +N  
Sbjct: 244 VHDYMITSGYECDTTASNILINMYAKCGNLLASQEVFSGMKCKDSVSWNSMINVYIQNGK 303

Query: 469 --NSEKAFE----------------------------LLHEIEDTGVGTSAYTFASLLSG 498
             +S K FE                            ++  +   GV     T  S+L  
Sbjct: 304 MGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSILPV 363

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            S + A  +G++IH  I K G ES+  + N LI MYS+C ++  +FQVFK M+ ++V++W
Sbjct: 364 CSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTW 423

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           T++I+    +G   +A+  F +M A GI P+ + ++A++ ACSH+GL+ EG  +F  M  
Sbjct: 424 TALISACGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKK 483

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           ++ I  R+EHYAC+VDLL RS  L +A +FI SMPL  D  +W   L ACR+ GDTE+ +
Sbjct: 484 DYKIEPRIEHYACVVDLLSRSALLDKAEDFILSMPLKPDSSIWGALLSACRMSGDTEIAE 543

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
             +E I+E +P D   ++L+SN+YA+ G W+ V +IRK +K R L K+ GCSW+E  NKV
Sbjct: 544 RVSERIIELNPDDTGYYVLVSNIYAALGKWDQVRSIRKSIKARGLKKDPGCSWMEIQNKV 603

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           + F  G     +  E+   L  LA  + + GY+ +  FVLH+++E++K   L  HSE++A
Sbjct: 604 YVFGTGTKFFEQFEEVNKLLGMLAGLMAKEGYIANLQFVLHDIDEDEKRDILCGHSERLA 663

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           +AFGL++T    P++V KNLRVC DCHT  KYIS +  RE+++RD+NRFH  KDG CSC 
Sbjct: 664 IAFGLLNTKPGTPLQVMKNLRVCEDCHTVTKYISKIVQRELLVRDANRFHVFKDGACSCG 723

Query: 859 DYW 861
           DYW
Sbjct: 724 DYW 726



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 221/480 (46%), Gaps = 40/480 (8%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +HSL+    L  + +    LI+ Y+   D   +  +F+      ++  W+S+I +  + G
Sbjct: 35  LHSLIITLGLHHSVIFSAKLIAKYAHFRDPTSSFSVFRLASPSNNVYLWNSIIRALTHNG 94

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A+ ++ E   +   P+ Y F +VI AC+   +  +   I+  +L  G F SD+ +G
Sbjct: 95  LFSEALSLYSETQRIRLQPDTYTFPSVINACAGLLDFEMAKSIHDRVLDMG-FGSDLYIG 153

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA-------IRLFL 272
            ALIDM+ + + DL+ A KVF++M  ++ V W  +I+     G   +A       I+LF+
Sbjct: 154 NALIDMYCRFN-DLDKARKVFEEMPLRDVVSWNSLISGYNANGYWNEALEIYYQSIKLFM 212

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC- 331
           +M+ + F PD  T++ ++ AC  L     GK +H + I +G   D      L++MYAKC 
Sbjct: 213 EMV-NQFKPDLLTITSILQACGHLGDLEFGKYVHDYMITSGYECDTTASNILINMYAKCG 271

Query: 332 ---------------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
                                        +G + DS KVF+ M   ++++W  II   V 
Sbjct: 272 NLLASQEVFSGMKCKDSVSWNSMINVYIQNGKMGDSLKVFENMKARDIITWNTIIASCVH 331

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           S   +   +++ S M    V P+  T  S+L  C  L      ++++    K G   D  
Sbjct: 332 SEDCNL-GLRMISRMRTEGVTPDMATMLSILPVCSLLAAKRQGKEIHGCIFKLGLESDVP 390

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           VGN LI MY++ G + ++ + F+ +  K++V++  ++ A       +KA     E+E  G
Sbjct: 391 VGNVLIEMYSKCGSLRNSFQVFKLMKTKDVVTWTALISACGMYGEGKKAVRAFGEMEAAG 450

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAA 543
           +      F +++   S  G + +G     R+ K    E     Y  ++ + SR A ++ A
Sbjct: 451 IVPDHVAFVAIIFACSHSGLVEEGLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 510



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 121/457 (26%), Positives = 224/457 (49%), Gaps = 53/457 (11%)

Query: 29  PPSSSPPF-IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLK 86
           P SS   F +A P+ +  L N +I  L    +     +L   TQ+    PD  T+  ++ 
Sbjct: 64  PTSSFSVFRLASPSNNVYLWNSIIRALTHNGLFSEALSLYSETQRIRLQPDTYTFPSVIN 123

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C    +F + K +H  +       +  I N+LI +Y +  DL++A K+F+ M   RD+V
Sbjct: 124 ACAGLLDFEMAKSIHDRVLDMGFGSDLYIGNALIDMYCRFNDLDKARKVFEEMP-LRDVV 182

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLEL------GFCPNEYCFSAVIRACSNTENVAIGH 200
           SW+S+IS Y   G   +A+ ++ + ++L       F P+    +++++AC +  ++  G 
Sbjct: 183 SWNSLISGYNANGYWNEALEIYYQSIKLFMEMVNQFKPDLLTITSILQACGHLGDLEFGK 242

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++ +++  GY + D      LI+M+ K   +L ++ +VF  M  K++V W  MI    Q
Sbjct: 243 YVHDYMITSGY-ECDTTASNILINMYAKCG-NLLASQEVFSGMKCKDSVSWNSMINVYIQ 300

Query: 261 LGCPRDAIRLFLDM----ILS---------------------------GFLPDRFTLSGV 289
            G   D++++F +M    I++                           G  PD  T+  +
Sbjct: 301 NGKMGDSLKVFENMKARDIITWNTIIASCVHSEDCNLGLRMISRMRTEGVTPDMATMLSI 360

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +  CS L     GK++H    + GL  DV VG  L++MY+KC   GS+ +S +VF  M  
Sbjct: 361 LPVCSLLAAKRQGKEIHGCIFKLGLESDVPVGNVLIEMYSKC---GSLRNSFQVFKLMKT 417

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V++WTA+I+      G  K+AV+ F +M    + P+H  F +++ AC +   S + E+
Sbjct: 418 KDVVTWTALISA-CGMYGEGKKAVRAFGEMEAAGIVPDHVAFVAIIFACSH---SGLVEE 473

Query: 410 --VYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
              Y H +K+   ++  + +   ++ + +RS  ++ A
Sbjct: 474 GLNYFHRMKKDYKIEPRIEHYACVVDLLSRSALLDKA 510


>gi|357480155|ref|XP_003610363.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355511418|gb|AES92560.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 734

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/693 (36%), Positives = 406/693 (58%), Gaps = 11/693 (1%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKR 143
           L  C  ++N   G+ +H+ + ++    +  + N+ ++LY+K   L+ A  +F S+  N +
Sbjct: 18  LIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTNHLSHALTLFDSINDNDK 77

Query: 144 DIVSWSSMISSYVNRGKQVD---AIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIG 199
           D VSW+S+I+++           AI +F  M+      PN +  + V  A SN  +V  G
Sbjct: 78  DDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAGVFSAASNLSDVVAG 137

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
              +   +K G    DV VG +L++M+ K     + A K+FD+M E+NTV W  MI+   
Sbjct: 138 KQAHSVAVKTG-CSGDVYVGSSLLNMYCKTGFVFD-ARKLFDRMPERNTVSWATMISGYA 195

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
                  A+ +F  M     + + F L+ V+SA +      +G+Q+HS AI+ GL   V 
Sbjct: 196 SSDIADKAVEVFELMRREEEIQNEFALTSVLSALTSDVFVYTGRQVHSLAIKNGLLAIVS 255

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  +LV MYAKC   GS+DD+ + F+   D N ++W+A++TGY Q G  DK A+KLF+ M
Sbjct: 256 VANALVTMYAKC---GSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGDSDK-ALKLFNKM 311

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               V P+ FT   V+ AC +L      +Q+++ A K G  L   V ++++ MYA+ G +
Sbjct: 312 HSSGVLPSEFTLVGVINACSDLCAVVEGKQMHSFAFKLGFGLQLYVLSAVVDMYAKCGSL 371

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
            DARK FE + + ++V + +++  Y +N + E    L  +++   V  +  T AS+L   
Sbjct: 372 ADARKGFECVQQPDVVLWTSIITGYVQNGDYEGGLNLYGKMQMERVIPNELTMASVLRAC 431

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           SS+ A+ +G+Q+HARIIK GF+    I +AL +MY++C +++  + +F  M  R+VISW 
Sbjct: 432 SSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLIFWRMPSRDVISWN 491

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI+G +++G   +ALE+F KML +GIKP+ +T++ +LSACSH GL+  GW++F+ M+DE
Sbjct: 492 AMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSHMGLVDRGWEYFKMMFDE 551

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
             I   +EHYACMVD+L R+G L EA EFI S  +   + +WR  LGAC+ H + ELG +
Sbjct: 552 FNIAPMVEHYACMVDILSRAGKLNEAKEFIESATVDHGLCLWRILLGACKNHRNYELGVY 611

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           A E ++E    + +A++LLS++Y + G  E V  +R+ MK R + KE GCSWIE    VH
Sbjct: 612 AGEKLVELGSPESSAYVLLSSIYTALGDRENVERVRRIMKARGVNKEPGCSWIELKGLVH 671

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            F VG+  HP+  EI  EL+ L   + + GY P
Sbjct: 672 VFVVGDNQHPQVDEIRLELELLTKLMIDEGYQP 704



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 123/407 (30%), Positives = 221/407 (54%), Gaps = 16/407 (3%)

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           F P    L   +  C+  +    G+ LH+  ++TG    + V  + +++YAK      + 
Sbjct: 7   FPPQHRQLLQDLIECTHNKNILKGRTLHARILKTGSISSIYVTNTFLNLYAKTN---HLS 63

Query: 339 DSRKVFDRMLDHNV--MSWTAIITGYVQSGGRDKE--AVKLFSDMIQG-QVAPNHFTFAS 393
            +  +FD + D++   +SW ++I  + Q+        A+ LF  M++   V PN  T A 
Sbjct: 64  HALTLFDSINDNDKDDVSWNSLINAFSQNHSSSSSSFAISLFRRMMRANNVIPNAHTLAG 123

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           V  A  NL D    +Q ++ AVK G + D  VG+SL++MY ++G + DARK F+ + E+N
Sbjct: 124 VFSAASNLSDVVAGKQAHSVAVKTGCSGDVYVGSSLLNMYCKTGFVFDARKLFDRMPERN 183

Query: 454 LVSYNTMVDAYAKNLNSEKA---FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            VS+ TM+  YA +  ++KA   FEL+   E+     + +   S+LS  +S   +  G Q
Sbjct: 184 TVSWATMISGYASSDIADKAVEVFELMRREEEI---QNEFALTSVLSALTSDVFVYTGRQ 240

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H+  IK+G  +   + NAL++MY++C +++ A + F+   D+N I+W++M+TG+A+ G 
Sbjct: 241 VHSLAIKNGLLAIVSVANALVTMYAKCGSLDDAVRTFEFSGDKNSITWSAMVTGYAQGGD 300

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
           + +AL++F KM + G+ P+  T + V++ACS    + EG K   S   + G   ++   +
Sbjct: 301 SDKALKLFNKMHSSGVLPSEFTLVGVINACSDLCAVVEG-KQMHSFAFKLGFGLQLYVLS 359

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            +VD+  + GSL +A +    +    DV++W + +     +GD E G
Sbjct: 360 AVVDMYAKCGSLADARKGFECVQ-QPDVVLWTSIITGYVQNGDYEGG 405



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 64/117 (54%), Gaps = 1/117 (0%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T + +L++C        GK +H+ + +   +    I ++L ++Y+KCG L++   I
Sbjct: 419 PNELTMASVLRACSSLAALDQGKQMHARIIKYGFKLEVPIGSALSAMYTKCGSLDDGYLI 478

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
           F  M + RD++SW++MIS     G    A+ +F +ML  G  P+   F  ++ ACS+
Sbjct: 479 FWRMPS-RDVISWNAMISGLSQNGHGNKALELFEKMLLEGIKPDPVTFVNLLSACSH 534


>gi|347954518|gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  466 bits (1199), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/662 (37%), Positives = 385/662 (58%), Gaps = 36/662 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF+   E N + W  M+            + +++ M+  G +P+ +T   ++ +
Sbjct: 33  LPYAVSVFETXQEPNLLIWNTMLRGLASSSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKS 92

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK---------------------C 331
           C++ + F  G+Q+H+  ++ G  LD     SL+ MYA+                     C
Sbjct: 93  CAKSKTFEEGRQIHAQVMKLGCELDRYAHTSLISMYARNGRLEDARKVFDXSSQRDVVSC 152

Query: 332 TV-------DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           T         G V  +RKVFD + + +V+SW A+ITGYV++ G + EA++LF +M++  V
Sbjct: 153 TALITGYASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYE-EALELFKEMMRTNV 211

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKR---GRALDDCVGNSLISMYARSGRMED 441
            P+  T  SVL AC       +  +++T        G +L   + N+ I +Y++ G +E 
Sbjct: 212 RPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLK--IVNAFIGLYSKCGDVEI 269

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   FE L  K++VS+NT++  Y      ++A  L  E+  +G   +  T  S+L   + 
Sbjct: 270 ASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAH 329

Query: 502 IGAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +GAI  G  IH  I K   G  +   +  +LI MY++C ++EAA QVF  M  +++ SW 
Sbjct: 330 LGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWN 389

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI GFA HG A  A ++F +M  +GI+P+ IT + +LSACSH+GL+  G   F+S+  +
Sbjct: 390 AMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQD 449

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           + I  ++EHY CM+DLLG +G   EA E I  MP+  D ++W + L AC++HG+ EL + 
Sbjct: 450 YNITPKLEHYGCMIDLLGHAGLFKEAEEIIHMMPMEPDGVIWCSLLKACKMHGNLELAES 509

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
            A+ ++E +P++  +++LLSN+YA+AG WE VA IR+ +  + + K  GCS IE D+ VH
Sbjct: 510 FAQKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGMKKVPGCSSIEIDSVVH 569

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F +G+  HP++ EIY  L+++ + ++E G++PDT+ VL E+EEE K   L  HSEK+A+
Sbjct: 570 EFIIGDKLHPQSREIYRMLEEMDVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAI 629

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLIST     + V KNLRVC +CH A K IS +  REIV RD  RFHH +DG CSC D
Sbjct: 630 AFGLISTKPGTKLTVVKNLRVCRNCHEATKLISKIYKREIVARDRTRFHHFRDGVCSCCD 689

Query: 860 YW 861
           YW
Sbjct: 690 YW 691



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 133/523 (25%), Positives = 236/523 (45%), Gaps = 53/523 (10%)

Query: 101 HSLLTRSKLEPNSVILNSLISL---YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           H+ + ++ L   +  L+ L+ L         L  A  +F++   + +++ W++M+    +
Sbjct: 2   HAQMVKTGLHNTNYALSKLLELCVVSPHFDGLPYAVSVFETX-QEPNLLIWNTMLRGLAS 60

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG------- 210
               V  + M+V M+  G  PN Y F  ++++C+ ++    G  I+  ++K G       
Sbjct: 61  SSDLVSPLEMYVRMVSXGHVPNAYTFPFLLKSCAKSKTFEEGRQIHAQVMKLGCELDRYA 120

Query: 211 -------------------YFDS----DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
                               FD     DV    ALI  +     D+ SA KVFD +TE++
Sbjct: 121 HTSLISMYARNGRLEDARKVFDXSSQRDVVSCTALITGYASRG-DVRSARKVFDXITERD 179

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  MIT   +     +A+ LF +M+ +   PD  TL  V+SAC++      G+++H+
Sbjct: 180 VVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHT 239

Query: 308 WA-IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
                 G    + +  + + +Y+KC   G V+ +  +F+ +   +V+SW  +I GY    
Sbjct: 240 LVDDHHGFGSSLKIVNAFIGLYSKC---GDVEIASGLFEGLSCKDVVSWNTLIGGYTHM- 295

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--C 424
              KEA+ LF +M++   +PN  T  SVL AC +L   ++   ++ +  KR + + +   
Sbjct: 296 NLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSA 355

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +  SLI MYA+ G +E A + F S+  K+L S+N M+  +A +  +  AF+L   +   G
Sbjct: 356 LRTSLIDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNG 415

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAA 543
           +     T   LLS  S  G +  G  I   + +          Y  +I +       + A
Sbjct: 416 IEPDDITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAGLFKEA 475

Query: 544 FQVFK--EMEDRNVISWTSMITGFAKHG-------FAARALEI 577
            ++     ME   VI W S++     HG       FA + +EI
Sbjct: 476 EEIIHMMPMEPDGVI-WCSLLKACKMHGNLELAESFAQKLMEI 517



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 52/402 (12%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNS 118
           ++A+     M +    PD  T   +L +C +S +  LG+ +H+L+       +S+ I+N+
Sbjct: 197 EEALELFKEMMRTNVRPDEGTLVSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNA 256

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
            I LYSKCGD+  A+ +F+ +  K D+VSW+++I  Y +     +A+ +F EML  G  P
Sbjct: 257 FIGLYSKCGDVEIASGLFEGLSCK-DVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESP 315

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           N+    +V+ AC++   + IG  I+ ++ K      +   +  +LIDM+ K   D+E+A+
Sbjct: 316 NDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNGSALRTSLIDMYAKCG-DIEAAH 374

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +VF+ M  K+   W  MI      G    A  LF  M  +G  PD  TL G++SACS   
Sbjct: 375 QVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDDITLVGLLSACSHSG 434

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           L   G+ +                      +   T D ++    + +  M+D        
Sbjct: 435 LLDLGRHI----------------------FKSVTQDYNITPKLEHYGCMID-------- 464

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHA 414
            + G+    G  KEA ++   M    + P+   + S+LKAC   GNL      E   + A
Sbjct: 465 -LLGH---AGLFKEAEEIIHMM---PMEPDGVIWCSLLKACKMHGNL------ELAESFA 511

Query: 415 VKRGRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
            K      +  G+ ++  ++YA +GR ED  +  E L  K +
Sbjct: 512 QKLMEIEPENSGSYVLLSNIYATAGRWEDVARIREVLNGKGM 553


>gi|357132450|ref|XP_003567843.1| PREDICTED: pentatricopeptide repeat-containing protein At1g15510,
           chloroplastic-like [Brachypodium distachyon]
          Length = 868

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 276/803 (34%), Positives = 443/803 (55%), Gaps = 14/803 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G +Q+A++ L+   +    PD D Y  L   C   R    G         +       + 
Sbjct: 76  GELQQALWLLESSPEP---PDEDAYVALFHLCEWRRAAEHGLRACGHADAAHGTFGLRLG 132

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+++S+  + G+   A K+F  M  +RD+ SW+ M+  Y   G   +A+ ++  ML  G 
Sbjct: 133 NAMLSMLVRFGETWHAWKVFAKM-PERDVFSWNVMVGGYGKAGFLEEALDLYHRMLWAGA 191

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+ Y F  V+R+C    ++ +G  ++  +L+ G    +V V  AL+ M+ K   D+E+A
Sbjct: 192 RPDVYTFPCVLRSCGGVPDLTMGREVHAHVLRFG-LGVEVDVLNALVTMYAKCG-DVEAA 249

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            KVFD M+  + + W  MI    +       + LFL M+     P+  T++ V  A   L
Sbjct: 250 RKVFDGMSLTDCISWNAMIAGHFENHECEAGLELFLHMLEDEVEPNLMTITSVTVASGLL 309

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                 K++H+ A++ G A DV    SL+ MY+     G + ++  VF RM   + MSWT
Sbjct: 310 SDLDFAKEIHALAVKRGFATDVAFCNSLIQMYSSL---GRMGEACTVFSRMETRDAMSWT 366

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+I+GY ++G  DK A+++++ M    V+P+  T AS L AC +L   +V  +++  A  
Sbjct: 367 AMISGYEKNGFPDK-ALEVYALMEVNNVSPDDVTVASALAACASLGRLDVGIKLHELATS 425

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN-LNSEKAFE 475
           +G      V N+L+ MYA+S  +E A + F+ + +K+++S+++M+  +  N  N E  + 
Sbjct: 426 KGFIRYIVVANALVEMYAKSKIIEKAIEVFKYMPDKDVISWSSMIAGFCFNHKNFEALYY 485

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
             H + D  V  ++ TF + L+  ++ G++  G++IHA +++ G  S   + NAL+ +Y 
Sbjct: 486 FRHMLAD--VKPNSVTFIAALAACAATGSLRCGKEIHAHVLRQGIASEGYVPNALLDLYV 543

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C     A+  F     ++V+SW  M+ GF  HG    AL  F +ML  G  P+ +T++A
Sbjct: 544 KCGQTGYAWAQFGAHGTKDVVSWNIMLAGFVAHGHGDIALSFFNEMLETGEHPDEVTFVA 603

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L  CS AG++S+GW+ F SM +++ IV  ++HYACMVDLL R G LTE   FI  MP++
Sbjct: 604 LLCGCSRAGMVSQGWELFHSMTEKYSIVPNLKHYACMVDLLSRVGRLTEGYNFINRMPIT 663

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            D  VW   L  CR+H + ELG+ AA+++LE +P D   H+LLS+LYA AG W  V+ +R
Sbjct: 664 PDAAVWGALLNGCRIHRNIELGELAAKIVLELEPNDAGYHVLLSDLYADAGMWAEVSKVR 723

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K M+ + L  + GCSW+E    +H F   + SHP+  EI   LD +  ++K  G+ P  +
Sbjct: 724 KTMRVKGLEHDYGCSWVEVKGAIHAFLTDDESHPQIKEINDVLDGIYERMKASGFAPVES 783

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
           + L E +E  K   L  HSE++AVAFGLI+T+    I V KN   C  CH  ++ IS + 
Sbjct: 784 YSL-EDKEVSKDDVLCGHSERLAVAFGLINTTPGTSICVTKNQYTCESCHGILRMISKIV 842

Query: 836 GREIVLRDSNRFHHIKDGKCSCN 858
            REI +RD+  FHH +DG CSC 
Sbjct: 843 RREITVRDTKEFHHFRDGSCSCG 865


>gi|359488035|ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/647 (37%), Positives = 379/647 (58%), Gaps = 43/647 (6%)

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  +IT  T+   PR+A+ ++  +    F  D F    V+ AC ++     GK++H + +
Sbjct: 92  WNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVL 151

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           + GL  DV VG +L+ MY +C     V+ +R VFD+M++ +V+SW+ +I    +S  R+K
Sbjct: 152 KKGLDRDVFVGNALMLMYGEC---ACVEYARLVFDKMMERDVVSWSTMI----RSLSRNK 204

Query: 371 E---AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK--RGRALDDCV 425
           E   A++L  +M   QV P+     S++    +  +  + + ++ + ++      +    
Sbjct: 205 EFDMALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPT 264

Query: 426 GNSLISMYA-------------------------------RSGRMEDARKAFESLFEKNL 454
             +L+ MYA                               RS R+E+AR  F+S   +++
Sbjct: 265 TTALLDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDV 324

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           + +  M+ AYA+    ++AF L  ++  +GV  +  T  SLLS  +  GA+  G+ +H+ 
Sbjct: 325 MIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY 384

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           I K   E +  +  AL+ MY++C ++ AA ++F E   R++  W ++ITGFA HG+   A
Sbjct: 385 IDKERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEA 444

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L+IF +M   G+KPN IT+I +L ACSHAGL++EG K F  M    G+V ++EHY CMVD
Sbjct: 445 LDIFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVD 504

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LLGR+G L EA E I+SMP+  + +VW   + ACR+H + +LG+ AA  +LE +P++   
Sbjct: 505 LLGRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGY 564

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           ++L+SN+YA+A  W   A +RK MK   + KE G S IE +  VH+F +G+ SHP+   I
Sbjct: 565 NVLMSNIYAAANRWSDAAGVRKTMKTVGMKKEPGHSVIEVNGTVHEFLMGDQSHPQIRRI 624

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRV 814
              L ++  K+ E GY+PDT+ VL  ++EE+K   L  HSEK+A+AFGLIST+ S PIR+
Sbjct: 625 NEMLAEMRRKLNEAGYVPDTSTVLLNIDEEEKETALTYHSEKLAMAFGLISTAPSTPIRI 684

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            KNLRVC DCH A K +S + GR I++RD NRFHH ++G CSC DYW
Sbjct: 685 VKNLRVCNDCHAATKLLSKIYGRVIIVRDRNRFHHFREGYCSCGDYW 731



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 218/455 (47%), Gaps = 37/455 (8%)

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
            W+ +I+SY  R +  +A++++ ++ ++ F  + +   +V++AC       +G  I+GF+
Sbjct: 91  QWNFVITSYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFV 150

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           LK G  D DV VG AL+ M+ + +  +E A  VFDKM E++ V W+ MI   ++      
Sbjct: 151 LKKG-LDRDVFVGNALMLMYGECAC-VEYARLVFDKMMERDVVSWSTMIRSLSRNKEFDM 208

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSL 324
           A+ L  +M      P    +  +V+  ++      GK +H++ IR      + V    +L
Sbjct: 209 ALELIREMNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTAL 268

Query: 325 VDMYAKCTVDG----------------------------SVDDSRKVFDRMLDHNVMSWT 356
           +DMYAKC   G                             ++++R +FD   + +VM WT
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWT 328

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A+++ Y Q+   D +A  LF  M    V P   T  S+L  C      ++ + V+++ + 
Sbjct: 329 AMLSAYAQANCID-QAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSY-ID 386

Query: 417 RGRALDDCVGNS-LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + R   DC+ N+ L+ MYA+ G +  A + F     +++  +N ++  +A +   E+A +
Sbjct: 387 KERVEVDCILNTALVDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALD 446

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMY 534
           +  E+E  GV  +  TF  LL   S  G + +G+++  +++ + G       Y  ++ + 
Sbjct: 447 IFAEMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLL 506

Query: 535 SRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
            R   ++ A ++ K M  + N I W +++     H
Sbjct: 507 GRAGLLDEAHEMIKSMPIKPNTIVWGALVAACRLH 541



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 139/555 (25%), Positives = 248/555 (44%), Gaps = 73/555 (13%)

Query: 13  PPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLND---GRVQKAIFTLDLM 69
           P P    P++PS+ +L        I          + L   LND   G    A +   + 
Sbjct: 38  PTPLQTPPTSPSQHDLSTLEQTKQIHAHIIKTHFHHALQIPLNDFPSGLSPSAQWNFVIT 97

Query: 70  T-QKGNHPD--LDTYSLL---------------LKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           +  K N P   L+ Y+ L               LK+C +     LGK +H  + +  L+ 
Sbjct: 98  SYTKRNQPRNALNVYAQLRKMDFEVDNFMAPSVLKACGQVSWTQLGKEIHGFVLKKGLDR 157

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD-AIHMFVE 170
           +  + N+L+ +Y +C  +  A  +F  M  +RD+VSWS+MI S ++R K+ D A+ +  E
Sbjct: 158 DVFVGNALMLMYGECACVEYARLVFDKM-MERDVVSWSTMIRS-LSRNKEFDMALELIRE 215

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS-DVCVGCALIDMFVK- 228
           M  +   P+E    +++   ++T N+ +G  ++ ++++    +   V    AL+DM+ K 
Sbjct: 216 MNFMQVRPSEVAMVSMVNLFADTANMRMGKAMHAYVIRNSNNEHMGVPTTTALLDMYAKC 275

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRC------------------------------ 258
           G + L  A ++F+ +T+K  V WT MI  C                              
Sbjct: 276 GHLGL--ARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVMIWTAMLSA 333

Query: 259 -TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q  C   A  LF  M  SG  P + T+  ++S C+       GK +HS+  +  + +D
Sbjct: 334 YAQANCIDQAFNLFDQMRTSGVRPTKVTIVSLLSLCAVAGALDLGKWVHSYIDKERVEVD 393

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             +  +LVDMYAKC   G ++ + ++F   +  ++  W AIITG+    G  +EA+ +F+
Sbjct: 394 CILNTALVDMYAKC---GDINAAGRLFIEAISRDICMWNAIITGFAMH-GYGEEALDIFA 449

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR-GRALDDCVGNSLISMYARS 436
           +M +  V PN  TF  +L AC +       ++++   V   G          ++ +  R+
Sbjct: 450 EMERQGVKPNDITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRA 509

Query: 437 GRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAFELLHEIEDTGVG-----T 487
           G +++A +  +S+  + N + +  +V A   + N    E A   L EIE    G     +
Sbjct: 510 GLLDEAHEMIKSMPIKPNTIVWGALVAACRLHKNPQLGELAATQLLEIEPENCGYNVLMS 569

Query: 488 SAYTFASLLSGASSI 502
           + Y  A+  S A+ +
Sbjct: 570 NIYAAANRWSDAAGV 584


>gi|115475988|ref|NP_001061590.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|38423978|dbj|BAD01706.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|38637396|dbj|BAD03655.1| PPR-repeat protein-like [Oryza sativa Japonica Group]
 gi|113623559|dbj|BAF23504.1| Os08g0340900 [Oryza sativa Japonica Group]
 gi|215686971|dbj|BAG90841.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 819

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 251/693 (36%), Positives = 408/693 (58%), Gaps = 9/693 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L++C +S+   LG+ VH +  +  L+ N  +  +LI+LY+K G ++EA  +F ++   R
Sbjct: 126 VLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKLGCMDEAMLVFHAL-PVR 184

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
             V+W+++I+ Y   G    A+ +F  M   G  P+ +  ++ + ACS    +  G  I+
Sbjct: 185 TPVTWNTVITGYAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIH 244

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G+  +    ++D  V   LID++ K S  L +A K+FD M  +N V WT MI+   Q   
Sbjct: 245 GYAYRSAT-ETDTSVINVLIDLYCKCS-RLSAARKLFDCMEYRNLVSWTTMISGYMQNSF 302

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +AI +F +M  +G+ PD F  + ++++C  L     G+Q+H+  I+  L  D  V  +
Sbjct: 303 NAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNA 362

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD-KEAVKLFSDMIQG 382
           L+DMYAKC     + ++R VFD + + + +S+ A+I GY  S  RD  EAV +F  M   
Sbjct: 363 LIDMYAKCE---HLTEARAVFDALAEDDAISYNAMIEGY--SKNRDLAEAVNIFQRMRFF 417

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            + P+  TF S+L    + L   +++Q++   +K G +LD    ++LI +Y++   + DA
Sbjct: 418 SLRPSLLTFVSLLGVSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDA 477

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           +  F  L  K++V +N+M+  +A+N   E+A +L +++  +G+  + +TF +L++ AS++
Sbjct: 478 KTVFNMLHYKDMVIWNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTL 537

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            ++  G+Q HA IIK+G +++  + NALI MY++C  ++    +F+     +VI W SMI
Sbjct: 538 ASMFHGQQFHAWIIKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMI 597

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           T +A+HG A  AL++F  M    ++PN +T++ VLSAC+HAG + EG  HF SM   + I
Sbjct: 598 TTYAQHGHAEEALQVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEGLNHFNSMKSNYDI 657

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +EHYA +V+L GRSG L  A EFI  MP+     VWR+ L AC + G+ E+G++AAE
Sbjct: 658 EPGIEHYASVVNLFGRSGKLHAAKEFIERMPIKPAAAVWRSLLSACHLFGNAEIGRYAAE 717

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
           M L  DP D   ++LLSN+YAS G W  V N+R++M     +KE GCSWIE   +VH F 
Sbjct: 718 MALLADPTDSGPYVLLSNIYASKGLWADVHNLRQQMDSSGTVKETGCSWIEVTKEVHTFI 777

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           V    HP+   IY+ LD+L   IK  GY+PDT+
Sbjct: 778 VRGREHPEAELIYSVLDELTSLIKNLGYVPDTS 810



 Score =  310 bits (794), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 194/598 (32%), Positives = 320/598 (53%), Gaps = 17/598 (2%)

Query: 84  LLKSCIRSRNFHLGKL---VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           +L SC+ +    L +L   +H+  T +    +  + N L+  YS  G L +A  +F  M 
Sbjct: 21  VLLSCLPTGGDRLRRLNPAIHARATVAGRLDDLFLTNLLLRGYSNLGRLRDARHLFDRMP 80

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC--PNEYCFSAVIRACSNTENVAI 198
           + R++VSW S+IS Y   G+   AI +FV   +   C  PNE+  ++V+RAC+ ++ V++
Sbjct: 81  H-RNLVSWGSVISMYTQHGRDDCAISLFVA-FQKASCEVPNEFLLASVLRACTQSKAVSL 138

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           G  ++G  +K    D++V VG ALI+++ K G +D   A  VF  +  +  V W  +IT 
Sbjct: 139 GEQVHGIAVKLD-LDANVYVGTALINLYAKLGCMD--EAMLVFHALPVRTPVTWNTVITG 195

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             Q+GC   A+ LF  M + G  PDRF L+  VSACS L     G+Q+H +A R+    D
Sbjct: 196 YAQIGCGGVALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETD 255

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             V   L+D+Y KC+    +  +RK+FD M   N++SWT +I+GY+Q+   + EA+ +F 
Sbjct: 256 TSVINVLIDLYCKCS---RLSAARKLFDCMEYRNLVSWTTMISGYMQN-SFNAEAITMFW 311

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           +M Q    P+ F   S+L +CG+L       Q++ H +K     D+ V N+LI MYA+  
Sbjct: 312 NMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIKADLEADEYVKNALIDMYAKCE 371

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            + +AR  F++L E + +SYN M++ Y+KN +  +A  +   +    +  S  TF SLL 
Sbjct: 372 HLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLG 431

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
            +SS  AI   +QIH  IIKSG   +    +ALI +YS+C+ V  A  VF  +  ++++ 
Sbjct: 432 VSSSQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYSKCSLVNDAKTVFNMLHYKDMVI 491

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W SMI G A++     A+++F ++L  G+ PN  T++A+++  S    +  G + F +  
Sbjct: 492 WNSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHG-QQFHAWI 550

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            + G+         ++D+  + G + E      S     DV+ W + +     HG  E
Sbjct: 551 IKAGVDNDPHVSNALIDMYAKCGFIKEGRMLFES-TCGEDVICWNSMITTYAQHGHAE 607



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 138/506 (27%), Positives = 264/506 (52%), Gaps = 11/506 (2%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+   D M  +G  PD    +  + +C        G+ +H    RS  E ++ ++N LI 
Sbjct: 205 ALELFDRMGIEGVRPDRFVLASAVSACSALGFLEGGRQIHGYAYRSATETDTSVINVLID 264

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           LY KC  L+ A K+F  M   R++VSW++MIS Y+      +AI MF  M + G+ P+ +
Sbjct: 265 LYCKCSRLSAARKLFDCM-EYRNLVSWTTMISGYMQNSFNAEAITMFWNMTQAGWQPDGF 323

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
             ++++ +C +   +  G  I+  ++K    ++D  V  ALIDM+ K    L  A  VFD
Sbjct: 324 ACTSILNSCGSLAAIWQGRQIHAHVIKAD-LEADEYVKNALIDMYAKCE-HLTEARAVFD 381

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            + E + + +  MI   ++     +A+ +F  M      P   T   ++   S       
Sbjct: 382 ALAEDDAISYNAMIEGYSKNRDLAEAVNIFQRMRFFSLRPSLLTFVSLLGVSSSQLAIEL 441

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
            KQ+H   I++G +LD+    +L+D+Y+KC++   V+D++ VF+ +   +++ W ++I G
Sbjct: 442 SKQIHGLIIKSGTSLDLYAASALIDVYSKCSL---VNDAKTVFNMLHYKDMVIWNSMIFG 498

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q+  + +EA+KLF+ ++   +APN FTF +++     L      +Q +   +K G   
Sbjct: 499 HAQN-EQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFHGQQFHAWIIKAGVDN 557

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  V N+LI MYA+ G +++ R  FES   ++++ +N+M+  YA++ ++E+A ++   + 
Sbjct: 558 DPHVSNALIDMYAKCGFIKEGRMLFESTCGEDVICWNSMITTYAQHGHAEEALQVFRLMG 617

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCAN 539
           +  V  +  TF  +LS  +  G +G+G   H   +KS ++    I  Y ++++++ R   
Sbjct: 618 EAEVEPNYVTFVGVLSACAHAGFVGEGLN-HFNSMKSNYDIEPGIEHYASVVNLFGRSGK 676

Query: 540 VEAAFQVFKEMEDRNVIS-WTSMITG 564
           + AA +  + M  +   + W S+++ 
Sbjct: 677 LHAAKEFIERMPIKPAAAVWRSLLSA 702



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 243/466 (52%), Gaps = 13/466 (2%)

Query: 222 LIDMFVKGSVDL---ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LS 277
           L ++ ++G  +L     A  +FD+M  +N V W  +I+  TQ G    AI LF+     S
Sbjct: 55  LTNLLLRGYSNLGRLRDARHLFDRMPHRNLVSWGSVISMYTQHGRDDCAISLFVAFQKAS 114

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
             +P+ F L+ V+ AC++ +  + G+Q+H  A++  L  +V VG +L+++YAK    G +
Sbjct: 115 CEVPNEFLLASVLRACTQSKAVSLGEQVHGIAVKLDLDANVYVGTALINLYAKL---GCM 171

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           D++  VF  +     ++W  +ITGY Q G     A++LF  M    V P+ F  AS + A
Sbjct: 172 DEAMLVFHALPVRTPVTWNTVITGYAQIGC-GGVALELFDRMGIEGVRPDRFVLASAVSA 230

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C  L       Q++ +A +     D  V N LI +Y +  R+  ARK F+ +  +NLVS+
Sbjct: 231 CSALGFLEGGRQIHGYAYRSATETDTSVINVLIDLYCKCSRLSAARKLFDCMEYRNLVSW 290

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
            TM+  Y +N  + +A  +   +   G     +   S+L+   S+ AI +G QIHA +IK
Sbjct: 291 TTMISGYMQNSFNAEAITMFWNMTQAGWQPDGFACTSILNSCGSLAAIWQGRQIHAHVIK 350

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +  E++  + NALI MY++C ++  A  VF  + + + IS+ +MI G++K+   A A+ I
Sbjct: 351 ADLEADEYVKNALIDMYAKCEHLTEARAVFDALAEDDAISYNAMIEGYSKNRDLAEAVNI 410

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M    ++P+ +T++++L   S + L  E  K    +  + G    +   + ++D+  
Sbjct: 411 FQRMRFFSLRPSLLTFVSLLGVSS-SQLAIELSKQIHGLIIKSGTSLDLYAASALIDVYS 469

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
           +  SL    + + +M    D+++W + +     H   E G+ A ++
Sbjct: 470 KC-SLVNDAKTVFNMLHYKDMVIWNSMIFG---HAQNEQGEEAIKL 511



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 83/154 (53%), Gaps = 4/154 (2%)

Query: 48  NRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTY-SLLLKSCIRSRNFHLGKLVHSLLT 105
           N +I+ H  + + ++AI   + +   G  P+  T+ +L+  +   +  FH G+  H+ + 
Sbjct: 493 NSMIFGHAQNEQGEEAIKLFNQLLLSGMAPNEFTFVALVTVASTLASMFH-GQQFHAWII 551

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           ++ ++ +  + N+LI +Y+KCG + E   +F+S   + D++ W+SMI++Y   G   +A+
Sbjct: 552 KAGVDNDPHVSNALIDMYAKCGFIKEGRMLFESTCGE-DVICWNSMITTYAQHGHAEEAL 610

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            +F  M E    PN   F  V+ AC++   V  G
Sbjct: 611 QVFRLMGEAEVEPNYVTFVGVLSACAHAGFVGEG 644


>gi|414887370|tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/701 (35%), Positives = 386/701 (55%), Gaps = 74/701 (10%)

Query: 233 LESAYKVFDKM--TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGV 289
           L +A   FD +    ++TV    +I+   +      A+ +F  ++ SG L PD ++ + +
Sbjct: 104 LPAAVSFFDAVPPARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTAL 163

Query: 290 VSACSELELFT--SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           +SA   L   +     QLH   +++G    + V  +LV +Y KC    +  D+RKV D M
Sbjct: 164 LSAGGHLPNISVRHCAQLHCSVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEM 223

Query: 348 LDHNVMSWTAIITGYVQSG------------------------------GRDKEAVKLFS 377
            + + ++WT ++ GYV+ G                              G   EA +LF 
Sbjct: 224 PNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFR 283

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK------RGRALDDCVGNSLIS 431
            M+  +V  + FTF SVL AC N+      + V+   ++         AL   V N+L++
Sbjct: 284 RMVLERVPLDEFTFTSVLSACANVGLFAHGKSVHGQIIRLQPNFVPEAALP--VNNALVT 341

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNT-------------------------------M 460
            Y++ G +  AR+ F+++  K++VS+NT                               M
Sbjct: 342 FYSKCGNIAVARRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVM 401

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           V  Y     +E A +L +++    V    YT+A  ++    +GA+  G+Q+H  I++ GF
Sbjct: 402 VSGYVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGF 461

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
           E ++   NALI+MY+RC  V+ A  +F  M + + +SW +MI+   +HG    ALE+F +
Sbjct: 462 EGSNSAGNALITMYARCGAVKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDR 521

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M+A+GI P+ I+++ VL+AC+H+GL+ EG+++F SM  + GI+   +HY  ++DLLGR+G
Sbjct: 522 MVAEGIYPDRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAG 581

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            + EA + I++MP      +W   L  CR  GD ELG HAA+ + +  PQ    +ILLSN
Sbjct: 582 RIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSN 641

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
            Y++AG W   A +RK M++R + KE GCSWIEA NKVH F VG+T HP+  E+Y  L+ 
Sbjct: 642 TYSAAGCWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFLVGDTKHPEAHEVYKFLEM 701

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +  K+++ GY+PDT  VLH++E  QK   LF HSE++AV FGL++      + V KNLR+
Sbjct: 702 VGAKMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLNLPPGATVTVLKNLRI 761

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           C DCH AI ++S   GREIV+RD  RFHH KDG+CSC +YW
Sbjct: 762 CDDCHAAIMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 154/593 (25%), Positives = 257/593 (43%), Gaps = 89/593 (15%)

Query: 92  RNFHLGKLVHSLLTRSKL---EPNSVILNSLISLYSKCGDLNEANKIFKSMGN-KRDIVS 147
           R  HL  L   L   + L   +P  V   SL++ Y+    L  A   F ++   +RD V 
Sbjct: 64  RLIHLYTLSRDLPAAATLFCADPCPVSATSLVAAYAAADRLPAAVSFFDAVPPARRDTVL 123

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHI--IYG 204
            +++IS+Y        A+ +F  +L  G   P++Y F+A++ A  +  N+++ H   ++ 
Sbjct: 124 HNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTALLSAGGHLPNISVRHCAQLHC 183

Query: 205 FLLKCGYFDS-DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI---TRCTQ 260
            +LK G   +  VC     + M  +       A KV D+M  K+ + WT M+    R   
Sbjct: 184 SVLKSGAGGALSVCNALVALYMKCESPEATRDARKVLDEMPNKDDLTWTTMVVGYVRRGD 243

Query: 261 LGCPR----------------------------DAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +G  R                            +A  LF  M+L     D FT + V+SA
Sbjct: 244 VGAARSVFEEVDGKFDVVWNAMISGYVHSGMAVEAFELFRRMVLERVPLDEFTFTSVLSA 303

Query: 293 CSELELFTSGKQLHSWAIRTGLAL----DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           C+ + LF  GK +H   IR          + V  +LV  Y+KC   G++  +R++FD M 
Sbjct: 304 CANVGLFAHGKSVHGQIIRLQPNFVPEAALPVNNALVTFYSKC---GNIAVARRIFDNMT 360

Query: 349 DHNVMSWTAIITGYVQS------------------------------GGRDKEAVKLFSD 378
             +V+SW  I++GYV+S                              GG  ++A+KLF+ 
Sbjct: 361 LKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAEDALKLFNK 420

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    V P  +T+A  + ACG L      +Q++ H V+ G    +  GN+LI+MYAR G 
Sbjct: 421 MRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGSNSAGNALITMYARCGA 480

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +++A   F  +   + VS+N M+ A  ++ +  +A EL   +   G+     +F ++L+ 
Sbjct: 481 VKEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTA 540

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
            +  G + +G +    + +  G       Y  LI +  R   +  A  + K M      S
Sbjct: 541 CNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPS 600

Query: 558 -WTSMITGFAKHG---FAARALEIFYKMLA--DGIKPNGITYIAVLSACSHAG 604
            W ++++G    G     A A +  +KM    DG      TYI + +  S AG
Sbjct: 601 IWEAILSGCRTSGDMELGAHAADQLFKMTPQHDG------TYILLSNTYSAAG 647



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 89/327 (27%), Positives = 150/327 (45%), Gaps = 49/327 (14%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV------ILNSLISLYSKCGDLNEAN 133
           T++ +L +C     F  GK VH  + R  L+PN V      + N+L++ YSKCG++  A 
Sbjct: 296 TFTSVLSACANVGLFAHGKSVHGQIIR--LQPNFVPEAALPVNNALVTFYSKCGNIAVAR 353

Query: 134 KIFKSMGNKRDIVSWSS-------------------------------MISSYVNRGKQV 162
           +IF +M   +D+VSW++                               M+S YV+ G   
Sbjct: 354 RIFDNM-TLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAE 412

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           DA+ +F +M      P +Y ++  I AC     +  G  ++G +++ G F+     G AL
Sbjct: 413 DALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLG-FEGSNSAGNAL 471

Query: 223 IDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           I M+ + G+V  + A+ +F  M   ++V W  MI+   Q G  R+A+ LF  M+  G  P
Sbjct: 472 ITMYARCGAV--KEAHLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMVAEGIYP 529

Query: 282 DRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           DR +   V++AC+   L   G +   S     G+         L+D+  +    G + ++
Sbjct: 530 DRISFLTVLTACNHSGLVDEGFRYFESMKRDFGIIPGEDHYTRLIDLLGRA---GRIGEA 586

Query: 341 RKVFDRM-LDHNVMSWTAIITGYVQSG 366
           R +   M  +     W AI++G   SG
Sbjct: 587 RDLIKTMPFEPTPSIWEAILSGCRTSG 613



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 39/141 (27%), Positives = 74/141 (52%), Gaps = 1/141 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G  + A+   + M  +   P   TY+  + +C        GK +H  + +   E +
Sbjct: 405 YVHGGFAEDALKLFNKMRSENVKPCDYTYAGAIAACGELGALKHGKQLHGHIVQLGFEGS 464

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +   N+LI++Y++CG + EA+ +F  M N  D VSW++MIS+    G   +A+ +F  M+
Sbjct: 465 NSAGNALITMYARCGAVKEAHLMFLVMPNI-DSVSWNAMISALGQHGHGREALELFDRMV 523

Query: 173 ELGFCPNEYCFSAVIRACSNT 193
             G  P+   F  V+ AC+++
Sbjct: 524 AEGIYPDRISFLTVLTACNHS 544


>gi|225462250|ref|XP_002263297.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
 gi|297736133|emb|CBI24171.3| unnamed protein product [Vitis vinifera]
          Length = 687

 Score =  466 bits (1198), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 241/668 (36%), Positives = 383/668 (57%), Gaps = 40/668 (5%)

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSG 288
           S DL+ A  +FDK+ + +   WT++I+  T+ G   +AI+ + D      + PD+  L  
Sbjct: 24  SGDLQRARHLFDKIPQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVEPDKLLLLS 83

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V  AC+ L    + K++H  AIR G   DV +G +L+DMY KC      + +R VF+ M 
Sbjct: 84  VAKACASLRDVMNAKRVHEDAIRFGFCSDVLLGNALIDMYGKCRCS---EGARLVFEGMP 140

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +V+SWT++ + YV  G   +EA+  F  M      PN  T +S+L AC +L D     
Sbjct: 141 FRDVISWTSMASCYVNCG-LLREALGAFRKMGLNGERPNSVTVSSILPACTDLKDLKSGR 199

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY---- 464
           +V+   V+ G   +  V ++L++MYA    +  A+  F+S+  ++ VS+N ++ AY    
Sbjct: 200 EVHGFVVRNGMGGNVFVSSALVNMYASCLSIRQAQLVFDSMSRRDTVSWNVLITAYFLNK 259

Query: 465 -------------------------------AKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
                                           +N  +EKA E+L  ++++G   +  T  
Sbjct: 260 ECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSGFKPNQITIT 319

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+L   +++ ++  G+QIH  I +  F  +     AL+ MY++C ++E + +VF  M  R
Sbjct: 320 SVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSRRVFSMMTKR 379

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           + +SW +MI   + HG    AL +F +M+  G++PN +T+  VLS CSH+ L+ EG   F
Sbjct: 380 DTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIF 439

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            SM  +H +    +H++CMVD+L R+G L EA EFI+ MP+      W   LG CRV+ +
Sbjct: 440 DSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGALLGGCRVYKN 499

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            ELG+ AA  + E +  +P  ++LLSN+  SA  W   +  RK M++R + K  GCSWI+
Sbjct: 500 VELGRIAANRLFEIESDNPGNYVLLSNILVSAKLWSEASETRKLMRDRGVTKNPGCSWIQ 559

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
             N+VH F VG+ S+ ++ EIY  LD +  K++  GYLP+T+FVL ++++E+K + L  H
Sbjct: 560 VRNRVHTFVVGDKSNDQSDEIYRFLDYMGEKMRIAGYLPNTDFVLQDVDQEEKEEVLCNH 619

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+AVAFG+++ +    IRVFKNLR+CGDCH AIK+++ + G +I++RDS RFHH +DG
Sbjct: 620 SEKLAVAFGVLNLNGESSIRVFKNLRICGDCHNAIKFMAKIVGVKIIVRDSLRFHHFRDG 679

Query: 854 KCSCNDYW 861
            CSC D+W
Sbjct: 680 LCSCQDFW 687



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 132/483 (27%), Positives = 238/483 (49%), Gaps = 43/483 (8%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC- 177
            I +YS  GDL  A  +F  +  + D+ +W+ +IS+    G+ ++AI  + +        
Sbjct: 17  FIKVYSNSGDLQRARHLFDKI-PQPDLPTWTILISALTKHGRSLEAIQYYNDFRHKNCVE 75

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P++    +V +AC++  +V     ++   ++ G F SDV +G ALIDM+ K     E A 
Sbjct: 76  PDKLLLLSVAKACASLRDVMNAKRVHEDAIRFG-FCSDVLLGNALIDMYGKCRCS-EGAR 133

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
            VF+ M  ++ + WT M +     G  R+A+  F  M L+G  P+  T+S ++ AC++L+
Sbjct: 134 LVFEGMPFRDVISWTSMASCYVNCGLLREALGAFRKMGLNGERPNSVTVSSILPACTDLK 193

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SG+++H + +R G+  +V V  +LV+MYA C    S+  ++ VFD M   + +SW  
Sbjct: 194 DLKSGREVHGFVVRNGMGGNVFVSSALVNMYASCL---SIRQAQLVFDSMSRRDTVSWNV 250

Query: 358 IITGYV----------------------------------QSGGRDKEAVKLFSDMIQGQ 383
           +IT Y                                      GR ++A+++ S M    
Sbjct: 251 LITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGCMQNGRTEKALEVLSRMQNSG 310

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
             PN  T  SVL AC NL      +Q++ +  +     D     +L+ MYA+ G +E +R
Sbjct: 311 FKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDLTTTTALVFMYAKCGDLELSR 370

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           + F  + +++ VS+NTM+ A + + N E+A  L  E+ D+GV  ++ TF  +LSG S   
Sbjct: 371 RVFSMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVDSGVRPNSVTFTGVLSGCSHSR 430

Query: 504 AIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSM 561
            + +G  I   + +    E +   ++ ++ + SR   +E A++  K+M  +    +W ++
Sbjct: 431 LVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAGRLEEAYEFIKKMPIEPTAGAWGAL 490

Query: 562 ITG 564
           + G
Sbjct: 491 LGG 493



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 134/489 (27%), Positives = 217/489 (44%), Gaps = 99/489 (20%)

Query: 30  PSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLL---- 85
           P+S PP +A       L    +Y  N G +Q+A    D + Q    PDL T+++L+    
Sbjct: 6   PTSLPPHLA-------LKFIKVYS-NSGDLQRARHLFDKIPQ----PDLPTWTILISALT 53

Query: 86  --------------------------------KSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
                                           K+C   R+    K VH    R     + 
Sbjct: 54  KHGRSLEAIQYYNDFRHKNCVEPDKLLLLSVAKACASLRDVMNAKRVHEDAIRFGFCSDV 113

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           ++ N+LI +Y KC     A  +F+ M   RD++SW+SM S YVN G   +A+  F +M  
Sbjct: 114 LLGNALIDMYGKCRCSEGARLVFEGM-PFRDVISWTSMASCYVNCGLLREALGAFRKMGL 172

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PN    S+++ AC++ +++  G  ++GF+++ G    +V V  AL++M+    + +
Sbjct: 173 NGERPNSVTVSSILPACTDLKDLKSGREVHGFVVRNG-MGGNVFVSSALVNMYAS-CLSI 230

Query: 234 ESAYKVFDKMTEKNTVGWTLMITR-----------------------------------C 258
             A  VFD M+ ++TV W ++IT                                    C
Sbjct: 231 RQAQLVFDSMSRRDTVSWNVLITAYFLNKECEKGLSVFGRMMSEGVGLNYASWNAVIGGC 290

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q G    A+ +   M  SGF P++ T++ V+ AC+ LE    GKQ+H +  R     D+
Sbjct: 291 MQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDL 350

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
               +LV MYAKC   G ++ SR+VF  M   + +SW  +I       G  +EA+ LF +
Sbjct: 351 TTTTALVFMYAKC---GDLELSRRVFSMMTKRDTVSWNTMIIA-TSMHGNGEEALLLFRE 406

Query: 379 MIQGQVAPNHFTFASVLKACGN--LLDSNVA---EQVYTHAVKRGRALDDCVGNSLISMY 433
           M+   V PN  TF  VL  C +  L+D  +         H+V+       C    ++ + 
Sbjct: 407 MVDSGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSC----MVDVL 462

Query: 434 ARSGRMEDA 442
           +R+GR+E+A
Sbjct: 463 SRAGRLEEA 471



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 3/206 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR +KA+  L  M   G  P+  T + +L +C    +   GK +H  + R     + 
Sbjct: 291 MQNGRTEKALEVLSRMQNSGFKPNQITITSVLPACTNLESLRGGKQIHGYIFRHWFFQDL 350

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
               +L+ +Y+KCGDL  + ++F SM  KRD VSW++MI +    G   +A+ +F EM++
Sbjct: 351 TTTTALVFMYAKCGDLELSRRVF-SMMTKRDTVSWNTMIIATSMHGNGEEALLLFREMVD 409

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PN   F+ V+  CS++  V  G +I+  + +    + D      ++D+  +    L
Sbjct: 410 SGVRPNSVTFTGVLSGCSHSRLVDEGLLIFDSMSRDHSVEPDADHHSCMVDVLSRAG-RL 468

Query: 234 ESAYKVFDKMTEKNTVG-WTLMITRC 258
           E AY+   KM  + T G W  ++  C
Sbjct: 469 EEAYEFIKKMPIEPTAGAWGALLGGC 494


>gi|297798898|ref|XP_002867333.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297313169|gb|EFH43592.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 792

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/749 (34%), Positives = 422/749 (56%), Gaps = 12/749 (1%)

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE- 173
           +L  L    S  G +  A  IF S+  + D+  ++ ++  +        ++ +F  + + 
Sbjct: 54  LLTKLTQRLSDLGAIYYARDIFLSV-QRPDVFLFNVLMRGFSVNESPHSSLAVFAHLRKS 112

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
               PN   ++  I A S   +   G +I+G  +  G  DS++ +G  ++ M+ K    +
Sbjct: 113 TDLKPNSSTYAFAISAASGFRDDRAGCVIHGQAIVDG-CDSELLLGSNIVKMYFK-FWRV 170

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSA 292
           E A KVFD+M EK+T+ W  MI+   +     ++I++F D+I  S    D  TL  ++ A
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            +EL+    G Q+HS A +TG      V    + +Y+KC   G +  +  +F      ++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC---GKIKMASTLFREFRRPDI 287

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +++ A+I GY  S G  + ++ LF +++         T  S++   G+L+   +   ++ 
Sbjct: 288 VAYNAMIHGYT-SNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLM---LIYAIHG 343

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +++K        V  +L ++Y++   +E ARK F+   EK+L S+N M+  Y +N  +E 
Sbjct: 344 YSLKSNFLSHTSVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  L  E++++    +  T   +LS  + +GA+  G+ +H  +  + FES+  +  ALI 
Sbjct: 404 AISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++C ++  A ++F  M  +N ++W +MI+G+  HG    AL IF +ML  GI P  +T
Sbjct: 464 MYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVT 523

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VL ACSHAGL+ EG + F SM   +G    ++HYAC+VD+LGR+G L  AL+FI +M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRALQFIEAM 583

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P+     VW T LGACR+H DT L +  +E + E DP +   H+LLSN++++  ++   A
Sbjct: 584 PIQPGPSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAA 643

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R+  K+R L K  G + IE     H F  G+ SHP+   I+ +L++L  K++E GY P
Sbjct: 644 TVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKAIHEKLEKLEGKMREAGYQP 703

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           +T   LH++EEE++   +  HSE++A+AFGLI+T     IR+ KNLRVC DCHTA K IS
Sbjct: 704 ETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTATKLIS 763

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +T R IV+RD+NRFHH KDG CSC DYW
Sbjct: 764 KITERVIVVRDANRFHHFKDGVCSCGDYW 792



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 225/453 (49%), Gaps = 23/453 (5%)

Query: 36  FIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F   P     L N +I  Y  N+  V+      DL+ +     D  T   +L +    + 
Sbjct: 177 FDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQE 236

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
             LG  +HSL T++    +  +L   ISLYSKCG +  A+ +F+    + DIV++++MI 
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMASTLFREF-RRPDIVAYNAMIH 295

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            Y + G+   ++ +F E++  G    +   S ++     + ++ + + I+G+ LK  +  
Sbjct: 296 GYTSNGETELSLSLFKELMLSG---AKLKSSTLVSLVPVSGHLMLIYAIHGYSLKSNFL- 351

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           S   V  AL  ++ K + ++ESA K+FD+  EK+   W  MI+  TQ G   DAI LF +
Sbjct: 352 SHTSVSTALTTVYSKLN-EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFRE 410

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M  S F P+  T++ ++SAC++L   + GK +H     T     + V  +L+ MYAKC  
Sbjct: 411 MQNSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKC-- 468

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            GS+ ++R++FD M   N ++W  +I+GY    G  +EA+ +FS+M+   +AP   TF  
Sbjct: 469 -GSIAEARRLFDFMPKKNEVTWNTMISGY-GLHGHGQEALTIFSEMLNSGIAPTPVTFLC 526

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFE---- 447
           VL AC +       ++++   + R    +  V +   ++ +  R+G ++ A +  E    
Sbjct: 527 VLYACSHAGLVKEGDEIFNSMIHR-YGFEPSVKHYACVVDILGRAGHLQRALQFIEAMPI 585

Query: 448 ----SLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
               S++E  L +     D       SEK FEL
Sbjct: 586 QPGPSVWETLLGACRIHKDTNLARTVSEKLFEL 618



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 128/535 (23%), Positives = 255/535 (47%), Gaps = 33/535 (6%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  TY+  + +    R+   G ++H        +   ++ ++++ +Y K   + +A K+
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGCVIHGQAIVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC-------FSAVIR 188
           F  M  K D + W++MIS Y      V++I +F +++      NE C          ++ 
Sbjct: 177 FDRMPEK-DTILWNTMISGYRKNEMYVESIQVFRDLI------NESCTRLDTTTLLDILP 229

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A +  + + +G  I+    K G +  D  V    I ++ K G + + S   +F +    +
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDY-VLTGFISLYSKCGKIKMAST--LFREFRRPD 286

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V +  MI   T  G    ++ LF +++LSG      TL  +V     L L  +   +H 
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGAKLKSSTLVSLVPVSGHLMLIYA---IHG 343

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           +++++       V  +L  +Y+K      ++ +RK+FD   + ++ SW A+I+GY Q+ G
Sbjct: 344 YSLKSNFLSHTSVSTALTTVYSKL---NEIESARKLFDESPEKSLPSWNAMISGYTQN-G 399

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--V 425
             ++A+ LF +M   + +PN  T   +L AC  L   ++ + V  H + R    +    V
Sbjct: 400 LTEDAISLFREMQNSEFSPNPVTITCILSACAQLGALSLGKWV--HDLVRSTDFESSIYV 457

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
             +LI MYA+ G + +AR+ F+ + +KN V++NTM+  Y  + + ++A  +  E+ ++G+
Sbjct: 458 STALIGMYAKCGSIAEARRLFDFMPKKNEVTWNTMISGYGLHGHGQEALTIFSEMLNSGI 517

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAF 544
             +  TF  +L   S  G + +G++I   +I + GFE +   Y  ++ +  R  +++ A 
Sbjct: 518 APTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACVVDILGRAGHLQRAL 577

Query: 545 QVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           Q  + M  +   S W +++     H     A  +  K+    + P+ + Y  +LS
Sbjct: 578 QFIEAMPIQPGPSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 109/237 (45%), Gaps = 4/237 (1%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           S+ N   S+   F   P  S P  N +I  +  +G  + AI     M      P+  T +
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQNSEFSPNPVTIT 424

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            +L +C +     LGK VH L+  +  E +  +  +LI +Y+KCG + EA ++F  M  K
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDFMPKK 484

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
            + V+W++MIS Y   G   +A+ +F EML  G  P    F  V+ ACS+   V  G  I
Sbjct: 485 NE-VTWNTMISGYGLHGHGQEALTIFSEMLNSGIAPTPVTFLCVLYACSHAGLVKEGDEI 543

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           +  ++    F+  V     ++D+  +    L+ A +  + M  +     W  ++  C
Sbjct: 544 FNSMIHRYGFEPSVKHYACVVDILGRAG-HLQRALQFIEAMPIQPGPSVWETLLGAC 599


>gi|34393605|dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
 gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
          Length = 808

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 243/699 (34%), Positives = 385/699 (55%), Gaps = 70/699 (10%)

Query: 233 LESAYKVFDKM--TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGV 289
           L  A   FD +    ++TV    M++   +      A+ +F  ++ SG L PD ++ + +
Sbjct: 110 LRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTAL 169

Query: 290 VSACSELELFTSG--KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           +SA  ++    +    QLH   +++G A  + V  +L+ +Y KC    +  D+RKV D M
Sbjct: 170 ISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEM 229

Query: 348 LDHNVMSWTAIITGYVQSG------------------------------GRDKEAVKLFS 377
            D + ++WT ++ GYV+ G                              G   +A +LF 
Sbjct: 230 PDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFR 289

Query: 378 DMIQGQVAPNHFTFASVLKACGN----LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            M+  +V  + FTF SVL AC N    +   +V  Q+              V N+L+++Y
Sbjct: 290 RMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLY 349

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNT-------------------------------MVD 462
           ++ G++  A++ F+++  K++VS+NT                               MV 
Sbjct: 350 SKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVS 409

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            Y     SE A +L +++    V    YT+A  ++    +GA+  G Q+HA +++ GFE+
Sbjct: 410 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 469

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           ++   NAL++MY++C  V  A  VF  M + + +SW +MI+   +HG    ALE+F +M+
Sbjct: 470 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 529

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           A+GI P+ I+++ +L+AC+HAGL+ EG+ +F SM  + GI    +HYA ++DLLGRSG +
Sbjct: 530 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 589

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA + I++MP      +W   L  CR +GD E G +AA+ +    PQ    +ILLSN Y
Sbjct: 590 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTY 649

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           ++AG W   A +RK M++R + KE GCSWIE  +K+H F VG+T HP+  E+Y  L+ + 
Sbjct: 650 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIG 709

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
            ++++ GY+PDT FVLH++E  +K   LF HSEK+AV FGL+       + V KNLR+CG
Sbjct: 710 ARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICG 769

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           DCHTA+ ++S   GREIV+RD  RFHH KDG+CSC +YW
Sbjct: 770 DCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 808



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 254/577 (44%), Gaps = 84/577 (14%)

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQV 162
           L RS  +P  V   SL++ ++  G L +A   F ++   +RD V  ++M+S++       
Sbjct: 85  LFRSDPDPGPVAATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAA 144

Query: 163 DAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVG 219
            A+ +F  +L  G   P++Y F+A+I A     N+A  H   ++  +LK G   + + V 
Sbjct: 145 PAVSVFHALLGSGSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGA-AAVLSVS 203

Query: 220 CALIDMFVKGSVDLES--AYKVFDKMTEKNTVGWTLM----------------------- 254
            ALI +++K      S  A KV D+M +K+ + WT M                       
Sbjct: 204 NALIALYMKCDTPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGK 263

Query: 255 --------ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
                   I+   Q G   DA  LF  M+      D FT + V+SAC+    F  GK +H
Sbjct: 264 FDVVWNAMISGYVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVH 323

Query: 307 SWAIRTGLAL----DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
              IR          + V  +LV +Y+K    G +  ++++FD M   +V+SW  I++GY
Sbjct: 324 GQIIRLQPNFVPEAALPVNNALVTLYSK---GGKIVIAKRIFDTMNLKDVVSWNTILSGY 380

Query: 363 VQSGGRDK------------------------------EAVKLFSDMIQGQVAPNHFTFA 392
           + SG  DK                              +A+KLF+ M    V P  +T+A
Sbjct: 381 IDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYA 440

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
             + ACG L       Q++ H V+ G    +  GN+L++MYA+ G + DAR  F  +   
Sbjct: 441 GAIAACGELGALKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNL 500

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           + VS+N M+ A  ++ +  +A EL  ++   G+     +F ++L+  +  G + +G    
Sbjct: 501 DSVSWNAMISALGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYF 560

Query: 513 ARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG- 569
             + +  G       Y  LI +  R   +  A  + K M      S W ++++G   +G 
Sbjct: 561 ESMKRDFGISPGEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGD 620

Query: 570 --FAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
             F A A +  ++M    I  +  TYI + +  S AG
Sbjct: 621 MEFGAYAADQLFRM----IPQHDGTYILLSNTYSAAG 653



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 118/471 (25%), Positives = 208/471 (44%), Gaps = 84/471 (17%)

Query: 76  PDLDTYSLLLKSCIRSRNF---HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN-- 130
           PD  +++ L+ +  +  N    H  +L H  + +S       + N+LI+LY KC      
Sbjct: 161 PDDYSFTALISAVGQMHNLAAPHCTQL-HCSVLKSGAAAVLSVSNALIALYMKCDTPEAS 219

Query: 131 -EANKIFKSMGNKRDIVSWSSMISSYVNRGKQ---------------------------- 161
            +A K+   M +K D+ +W++M+  YV RG                              
Sbjct: 220 WDARKVLDEMPDKDDL-TWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQS 278

Query: 162 ---VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG---YFDSD 215
               DA  +F  M+      +E+ F++V+ AC+N      G  ++G +++       ++ 
Sbjct: 279 GMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAA 338

Query: 216 VCVGCALIDMFVKGS---------------------------VD---LESAYKVFDKMTE 245
           + V  AL+ ++ KG                            +D   L+ A +VF  M  
Sbjct: 339 LPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPY 398

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN + W +M++     G   DA++LF  M      P  +T +G ++AC EL     G+QL
Sbjct: 399 KNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQL 458

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  ++ G       G +L+ MYAKC   G+V+D+R VF  M + + +SW A+I+   Q 
Sbjct: 459 HAHLVQCGFEASNSAGNALLTMYAKC---GAVNDARLVFLVMPNLDSVSWNAMISALGQH 515

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDD 423
            G  +EA++LF  M+   + P+  +F ++L AC    L+D       Y  ++KR   +  
Sbjct: 516 -GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH---YFESMKRDFGISP 571

Query: 424 CVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
              +   LI +  RSGR+ +AR   +++ FE     +  ++     N + E
Sbjct: 572 GEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDME 622



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 72/289 (24%), Positives = 136/289 (47%), Gaps = 57/289 (19%)

Query: 426 GNSLISMYARSGRMEDARKAFESL--FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
             SL++ +A +GR+ DA   F+++    ++ V +N M+ A+A+   +  A  + H +  +
Sbjct: 97  ATSLVAAHAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGS 156

Query: 484 G-VGTSAYTFASLLSGASSIGAIGKGE--QIHARIIKSGFESNHCIYNALISMYSRCANV 540
           G +    Y+F +L+S    +  +      Q+H  ++KSG  +   + NALI++Y +C   
Sbjct: 157 GSLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTP 216

Query: 541 EAAF---QVFKEMEDRNVISWTSM-------------------------------ITGFA 566
           EA++   +V  EM D++ ++WT+M                               I+G+ 
Sbjct: 217 EASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYV 276

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           + G  A A E+F +M+++ +  +  T+ +VLSAC++AG    G    +S+   HG + R+
Sbjct: 277 QSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHG----KSV---HGQIIRL 329

Query: 627 EH----------YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           +              +V L  + G +  A     +M L  DV+ W T L
Sbjct: 330 QPNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTIL 377



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G  + A+   + M  +   P   TY+  + +C        G+ +H+ L +   E +
Sbjct: 411 YVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS 470

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +   N+L+++Y+KCG +N+A  +F  M N  D VSW++MIS+    G   +A+ +F +M+
Sbjct: 471 NSAGNALLTMYAKCGAVNDARLVFLVMPN-LDSVSWNAMISALGQHGHGREALELFDQMV 529

Query: 173 ELGFCPNEYCFSAVIRACSNT 193
             G  P+   F  ++ AC++ 
Sbjct: 530 AEGIDPDRISFLTILTACNHA 550


>gi|359485813|ref|XP_003633340.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 679

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/662 (37%), Positives = 393/662 (59%), Gaps = 16/662 (2%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++ F LK   F+    V   L+ ++    + DL  A  +FD++  ++ + W  +I    +
Sbjct: 32  LHAFSLKTAIFNHPF-VSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVE 90

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                D I LF +++   +LPD FTL  V+  C+ L +   GKQ+H  A++ G   DV V
Sbjct: 91  NQFSHDGIVLFHELVHE-YLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFV 149

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             SLV+MY+KC   G +D +RKVFD M+D +V+ W ++I GY + G  D  A++LF +M 
Sbjct: 150 QGSLVNMYSKC---GEIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDI-ALQLFEEMP 205

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           + + A +       L  CG +     A +++     R         N++I+ Y +SG  +
Sbjct: 206 E-RDAFSWTVLVDGLSKCGKV---ESARKLFDQMPCRNLV----SWNAMINGYMKSGDFD 257

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A + F  +   +LV++N M+  Y  N     A ++   +   G   S  T  S+LS  S
Sbjct: 258 SALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVS 317

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            +  +GKG  IH+ + K+GFE +  +  +LI MY++C  +E+A  VF+ ++ + V  WT+
Sbjct: 318 GLAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKCGCIESALTVFRAIQKKKVGHWTA 377

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I G   HG A  AL +F +M   G+KPN I +I VL+AC+HAGL+ +G ++F  M +E+
Sbjct: 378 IIVGLGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEY 437

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I   +EHY C+VD+L R+G L EA   I +MP+S + ++W + LG  R HG  ++G++A
Sbjct: 438 KIEPTLEHYGCLVDILCRAGHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYA 497

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ ++E  P+    +ILLSN+YA++G WE V+++R+ M +R   K+ GCS +E    +H+
Sbjct: 498 AQRVIEVAPETIGCYILLSNMYAASGMWEKVSHVREMMYKRGFRKDPGCSSVEHKGTLHE 557

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE-EEQKVQYLFQHSEKIAV 799
           F VG+ SHP+T EIYA++ ++  K+K  G++PDT  VL  +E E++K   L  HSE++A+
Sbjct: 558 FIVGDISHPQTKEIYAKMSEMKEKLKCVGHVPDTTQVLLCIEGEKEKEAELENHSERLAI 617

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLI+     PIR+ KNLRVC DCH+  K +S +  REI++RD+ RFHH K+G CSC D
Sbjct: 618 AFGLINVKPGIPIRIMKNLRVCNDCHSVTKLLSKIYSREIIVRDNCRFHHFKNGSCSCMD 677

Query: 860 YW 861
           YW
Sbjct: 678 YW 679



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 146/563 (25%), Positives = 242/563 (42%), Gaps = 96/563 (17%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYS--KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           +H+   ++ +  +  + + L++LYS  K  DL  A  IF  +  +R ++ W+++I  YV 
Sbjct: 32  LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI-QRRSLIHWNTIIKCYVE 90

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                D I +F E++   + P+ +    VI+ C+    V  G  I+G  LK G F SDV 
Sbjct: 91  NQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIG-FGSDVF 148

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V  +L++M+ K   +++ A KVFD M +K+ V W  +I    + G    A++LF +M   
Sbjct: 149 VQGSLVNMYSKCG-EIDCARKVFDGMIDKDVVLWNSLIDGYARCGEIDIALQLFEEM--- 204

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
              P+R                       SW +             LVD  +KC   G V
Sbjct: 205 ---PERDAF--------------------SWTV-------------LVDGLSKC---GKV 225

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSG------------------------------G 367
           + +RK+FD+M   N++SW A+I GY++SG                              G
Sbjct: 226 ESARKLFDQMPCRNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNG 285

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
           +  +AVK+F  M++    P+H T  SVL A   L        ++++  K G  LD  +G 
Sbjct: 286 QFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGT 345

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           SLI MYA+ G +E A   F ++ +K +  +  ++     +  +  A  L  E+  TG+  
Sbjct: 346 SLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKP 405

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
           +A  F  +L+  +  G +  G Q    ++     E     Y  L+ +  R  ++E A   
Sbjct: 406 NAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNT 465

Query: 547 FKEME-DRNVISWTSMITGFAKHG-------FAARALEIFYKMLADGIKPNGITYIAVLS 598
            + M    N + W S++ G   HG        A R +E         + P  I    +LS
Sbjct: 466 IENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIE---------VAPETIGCYILLS 516

Query: 599 ACSHAGLISEGWKHFRSMYDEHG 621
               A  + E   H R M  + G
Sbjct: 517 NMYAASGMWEKVSHVREMMYKRG 539



 Score =  159 bits (403), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 136/487 (27%), Positives = 218/487 (44%), Gaps = 67/487 (13%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T   ++K C R      GK +H L  +     +  +  SL+++YSKCG+++ A K+
Sbjct: 110 PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKV 169

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M +K D+V W+S+I  Y   G+   A+ +F EM E     + + ++ ++   S    
Sbjct: 170 FDGMIDK-DVVLWNSLIDGYARCGEIDIALQLFEEMPE----RDAFSWTVLVDGLSKCGK 224

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGC----ALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
           V     +         FD   C       A+I+ ++K S D +SA ++F +M   + V W
Sbjct: 225 VESARKL---------FDQMPCRNLVSWNAMINGYMK-SGDFDSALELFYQMPIWDLVTW 274

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            LMI      G   DA+++F  M+  G  P   TL  V+SA S L +   G+ +HS+  +
Sbjct: 275 NLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEK 334

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            G  LD  +G SL++MYAKC   G ++ +  VF  +    V  WTAII G +   G    
Sbjct: 335 NGFELDGILGTSLIEMYAKC---GCIESALTVFRAIQKKKVGHWTAIIVG-LGIHGMANH 390

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A+ LF +M +  + PN   F  VL AC +                               
Sbjct: 391 ALALFLEMCKTGLKPNAIIFIGVLNACNH------------------------------- 419

Query: 432 MYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
               +G ++D R+ F+ +      E  L  Y  +VD   +  + E+A    + IE+  + 
Sbjct: 420 ----AGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEA---KNTIENMPIS 472

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            +   + SLL G+ + G I  GE    R+I+   E+  C Y  L +MY+     E    V
Sbjct: 473 PNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGC-YILLSNMYAASGMWEKVSHV 531

Query: 547 FKEMEDR 553
            + M  R
Sbjct: 532 REMMYKR 538



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 49/205 (23%), Positives = 94/205 (45%), Gaps = 4/205 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G+   A+    +M + G+ P   T   +L +         G+ +HS + ++  E 
Sbjct: 281 YELN-GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFEL 339

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           + ++  SLI +Y+KCG +  A  +F+++  K+ +  W+++I      G    A+ +F+EM
Sbjct: 340 DGILGTSLIEMYAKCGCIESALTVFRAI-QKKKVGHWTAIIVGLGIHGMANHALALFLEM 398

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            + G  PN   F  V+ AC++   V  G   +  ++     +  +     L+D+  +   
Sbjct: 399 CKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAG- 457

Query: 232 DLESAYKVFDKM-TEKNTVGWTLMI 255
            LE A    + M    N V W  ++
Sbjct: 458 HLEEAKNTIENMPISPNKVIWMSLL 482



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/218 (19%), Positives = 107/218 (49%), Gaps = 8/218 (3%)

Query: 509 EQIHARIIKSGFESNHCIYNALISMYS--RCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           EQ+HA  +K+   ++  + + L+++YS  +  ++  A  +F  ++ R++I W ++I  + 
Sbjct: 30  EQLHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRIQRRSLIHWNTIIKCYV 89

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           ++ F+   + +F++++ + + P+  T   V+  C+  G++ EG K    +  + G    +
Sbjct: 90  ENQFSHDGIVLFHELVHEYL-PDNFTLPCVIKGCARLGVVQEG-KQIHGLALKIGFGSDV 147

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
                +V++  + G +  A +    M +  DV++W + +      G+ ++   A ++  E
Sbjct: 148 FVQGSLVNMYSKCGEIDCARKVFDGM-IDKDVVLWNSLIDGYARCGEIDI---ALQLFEE 203

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
              +D  +  +L +  +  G  E    +  +M  RNL+
Sbjct: 204 MPERDAFSWTVLVDGLSKCGKVESARKLFDQMPCRNLV 241


>gi|357126882|ref|XP_003565116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 796

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 258/772 (33%), Positives = 434/772 (56%), Gaps = 17/772 (2%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSK--CGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           VH  + R+   P+  + N+L++ Y +   GD ++A ++   M  +R+ VS++ +I +Y  
Sbjct: 32  VHGHIARAHPSPSLFLRNTLLAAYCRLGAGDTHQARRLLDEM-PRRNAVSFNLLIDAYSR 90

Query: 158 RGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
            G+  +++  F+          + + ++A + ACS    +  G +++   +  G  +  V
Sbjct: 91  AGQTEESLETFLHAHRAAEVKADRFTYAAALAACSRAGRLKEGKVVHALAVLEGLAEG-V 149

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  +L+ M+ +   D+  A +VFD   E++ V W  +++   ++G   + +R+F  M  
Sbjct: 150 FVSNSLVSMYARCG-DMGEARRVFDVTEERDDVSWNSLVSGYLRVGAHEEMLRVFALMRR 208

Query: 277 SGFLPDRFTLSGVVSACSELELFTSG--KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
                + F L  V+  CS  +    G  + +H   ++ GL  D+ +  ++VDMYAK    
Sbjct: 209 CAMGLNSFALGSVIKCCSGGDGSVRGIAEAVHGCVVKAGLDTDLFLASAMVDMYAK---R 265

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD-----KEAVKLFSDMIQGQVAPNHF 389
           G++ ++  +F  +LD NV+ + A+I G  +          +EA+ L+S++    + P  F
Sbjct: 266 GALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVHKEVVREALSLYSELQSRGMEPTEF 325

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           TF+SV++AC    D    +Q++   +K     DD +G++LI +Y  S  MED  + F S+
Sbjct: 326 TFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSALIDLYFNSACMEDGFRCFRSV 385

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            ++++V++  M+    +N   E+A  L HE+   G+    +T +S+++  +S+  +  GE
Sbjct: 386 PKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKPDPFTISSVMNACASLAVVRTGE 445

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           Q+     KSGF+    + N+ I MY+R  NVEAA Q F+EME  +V+SW+++I+  A+HG
Sbjct: 446 QMQCFATKSGFDRFTAMGNSCIHMYARSGNVEAAIQRFQEMESHDVVSWSAIISSHAQHG 505

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
            A +AL+ F +M+   + PN IT++ VL+ACSH GL+ EG +++  M  E+G+   ++H 
Sbjct: 506 CARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGLVDEGLRYYEIMKMEYGLCPTVKHC 565

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
            C+VDLLGR+G L +A  FIR      + +VW++ LG+CR+H D E G+  A+ I+E  P
Sbjct: 566 TCVVDLLGRAGRLADAEAFIRDSIFHDEPVVWQSLLGSCRIHRDMERGQLVADRIMELQP 625

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
                ++ L N+Y  AG     + IR  MKER + KE G SWIE  + +H F  G+ SHP
Sbjct: 626 ASSGCYVNLYNMYLDAGELSLGSKIRDLMKERGVKKEPGLSWIELRSGIHSFVAGDKSHP 685

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS 809
           +   IY +L ++  KI +     DT+ +       ++  ++  HSEK+AVA G+I   +S
Sbjct: 686 ECNAIYTKLAEMLSKIDKL-TTTDTSCIEWVETTGREQNWMNCHSEKLAVALGIIHLPQS 744

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            PIRV KNLRVC DCH+ +K IS    REI+LRD  RFHH +DG CSC DYW
Sbjct: 745 APIRVMKNLRVCRDCHSTMKLISKSECREIILRDVIRFHHFRDGSCSCGDYW 796



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 131/244 (53%), Gaps = 3/244 (1%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           V++A+     +  +G  P   T+S ++++C  + +   GK +H  + +   + +  I ++
Sbjct: 305 VREALSLYSELQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           LI LY     + +  + F+S+  K+D+V+W++MIS  V       A+ +F E+L +G  P
Sbjct: 365 LIDLYFNSACMEDGFRCFRSV-PKQDVVTWTAMISGCVQNELFERALALFHELLGVGLKP 423

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           + +  S+V+ AC++   V  G  +  F  K G FD    +G + I M+ + S ++E+A +
Sbjct: 424 DPFTISSVMNACASLAVVRTGEQMQCFATKSG-FDRFTAMGNSCIHMYAR-SGNVEAAIQ 481

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
            F +M   + V W+ +I+   Q GC R A++ F +M+ +  +P+  T  GV++ACS   L
Sbjct: 482 RFQEMESHDVVSWSAIISSHAQHGCARQALQFFNEMVGAKVVPNEITFLGVLTACSHGGL 541

Query: 299 FTSG 302
              G
Sbjct: 542 VDEG 545


>gi|356561853|ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  465 bits (1197), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 244/653 (37%), Positives = 363/653 (55%), Gaps = 74/653 (11%)

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
            +PD F L   + +C+ L     G+QLH++A  +G   D  V  SL  MY KC     + 
Sbjct: 100 LIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCD---RIL 156

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF--------- 389
           D+RK+FDRM D +V+ W+A+I GY + G   +EA +LF +M  G V PN           
Sbjct: 157 DARKLFDRMPDRDVVVWSAMIAGYSRLG-LVEEAKELFGEMRSGGVEPNLVSWNGMLAGF 215

Query: 390 --------------------------TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
                                     T + VL A G L D  V  QV+ + +K+G   D 
Sbjct: 216 GNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDK 275

Query: 424 CVGNSLISMYARSGRMEDARKAFESL---------------------------------- 449
            V ++++ MY + G +++  + F+ +                                  
Sbjct: 276 FVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQ 335

Query: 450 -FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
             E N+V++ +++ + ++N    +A EL  +++  GV  +A T  SL+    +I A+  G
Sbjct: 336 KMELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHG 395

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           ++IH   ++ G   +  + +ALI MY++C  ++ A + F +M   N++SW +++ G+A H
Sbjct: 396 KEIHCFSLRRGIFDDVYVGSALIDMYAKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMH 455

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G A   +E+F+ ML  G KP+ +T+  VLSAC+  GL  EGW+ + SM +EHGI  +MEH
Sbjct: 456 GKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEH 515

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           YAC+V LL R G L EA   I+ MP   D  VW   L +CRVH +  LG+ AAE +   +
Sbjct: 516 YACLVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKLFFLE 575

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P +P  +ILLSN+YAS G W+    IR+ MK + L K  G SWIE  +KVH    G+ SH
Sbjct: 576 PTNPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSH 635

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
           P+  +I  +LD+L +++K+ GYLP TNFVL ++EE+ K Q L  HSEK+AV  GL++TS 
Sbjct: 636 PQMKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAVVLGLLNTSP 695

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +P++V KNLR+C DCH  IK IS + GREI +RD+NRFHH KDG CSC D+W
Sbjct: 696 GQPLQVIKNLRICDDCHAVIKVISRLEGREIYVRDTNRFHHFKDGVCSCGDFW 748



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 144/557 (25%), Positives = 259/557 (46%), Gaps = 76/557 (13%)

Query: 85  LKSCIRSRNFHL--GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN--EANKIFKSMG 140
           L  C+ S    L   +  H+L+ R  L  ++ +  SL+S Y+    L+  + +    S  
Sbjct: 5   LSQCLSSSTASLSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHL 64

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
               + S+SS+I ++         +  F  +  L   P+ +   + I++C++   +  G 
Sbjct: 65  PHPTLFSFSSLIHAFARSHHFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQ 124

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++ F    G+  +D  V  +L  M++K    L+ A K+FD+M +++ V W+ MI   ++
Sbjct: 125 QLHAFAAASGFL-TDSIVASSLTHMYLKCDRILD-ARKLFDRMPDRDVVVWSAMIAGYSR 182

Query: 261 LGCPRDAIRLFLDM-----------------------------------ILSGFLPDRFT 285
           LG   +A  LF +M                                   ++ GF PD  T
Sbjct: 183 LGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGST 242

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC-------------- 331
           +S V+ A   LE    G Q+H + I+ GL  D  V  +++DMY KC              
Sbjct: 243 VSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVE 302

Query: 332 --------------TVDGSVDDSRKVFDRMLDH----NVMSWTAIITGYVQSGGRDKEAV 373
                         + +G VD + +VF++  D     NV++WT+II    Q+G +D EA+
Sbjct: 303 EMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNG-KDLEAL 361

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
           +LF DM    V PN  T  S++ ACGN+      ++++  +++RG   D  VG++LI MY
Sbjct: 362 ELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVYVGSALIDMY 421

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+ GR++ AR+ F+ +   NLVS+N ++  YA +  +++  E+ H +  +G      TF 
Sbjct: 422 AKCGRIQLARRCFDKMSALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQSGQKPDLVTFT 481

Query: 494 SLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME- 551
            +LS  +  G   +G + +  + +  G E     Y  L+++ SR   +E A+ + KEM  
Sbjct: 482 CVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVGKLEEAYSIIKEMPF 541

Query: 552 DRNVISWTSMITGFAKH 568
           + +   W ++++    H
Sbjct: 542 EPDACVWGALLSSCRVH 558



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 225/490 (45%), Gaps = 88/490 (17%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD       +KSC   R    G+ +H+    S    +S++ +SL  +Y KC  + +A K+
Sbjct: 102 PDAFLLPSAIKSCASLRALDPGQQLHAFAAASGFLTDSIVASSLTHMYLKCDRILDARKL 161

Query: 136 FKSMGNKRDIVSWSSMISSYV-----------------------------------NRGK 160
           F  M + RD+V WS+MI+ Y                                    N G 
Sbjct: 162 FDRMPD-RDVVVWSAMIAGYSRLGLVEEAKELFGEMRSGGVEPNLVSWNGMLAGFGNNGF 220

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
             +A+ MF  ML  GF P+    S V+ A    E+V +G  ++G+++K G   SD  V  
Sbjct: 221 YDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQG-LGSDKFVVS 279

Query: 221 ALIDMFVK-------------------GSVD-----------LESAYKVFDKMTEK---- 246
           A++DM+ K                   GS++           +++A +VF+K  ++    
Sbjct: 280 AMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQKMEL 339

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           N V WT +I  C+Q G   +A+ LF DM   G  P+  T+  ++ AC  +     GK++H
Sbjct: 340 NVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIH 399

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            +++R G+  DV VG +L+DMYAKC   G +  +R+ FD+M   N++SW A++ GY    
Sbjct: 400 CFSLRRGIFDDVYVGSALIDMYAKC---GRIQLARRCFDKMSALNLVSWNAVMKGYAMH- 455

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT-----HAVKRGRAL 421
           G+ KE +++F  M+Q    P+  TF  VL AC     +    + Y      H ++     
Sbjct: 456 GKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEH 515

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAFELL 477
             C    L+++ +R G++E+A    + + FE +   +  ++ +   + N    E A E L
Sbjct: 516 YAC----LVTLLSRVGKLEEAYSIIKEMPFEPDACVWGALLSSCRVHNNLSLGEIAAEKL 571

Query: 478 HEIEDTGVGT 487
             +E T  G 
Sbjct: 572 FFLEPTNPGN 581



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 82/353 (23%), Positives = 155/353 (43%), Gaps = 36/353 (10%)

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
            +  +Q H+  +R  L  D  +  SL+  YA      +   S  +   +    + S++++
Sbjct: 16  LSQARQAHALILRLNLFSDTQLTTSLLSFYANALSLSTPQLSLTLSSHLPHPTLFSFSSL 75

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I  + +S       +  FS +   ++ P+ F   S +K+C +L   +  +Q++  A   G
Sbjct: 76  IHAFARSH-HFPHVLTTFSHLHPLRLIPDAFLLPSAIKSCASLRALDPGQQLHAFAAASG 134

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESL----------------------------- 449
              D  V +SL  MY +  R+ DARK F+ +                             
Sbjct: 135 FLTDSIVASSLTHMYLKCDRILDARKLFDRMPDRDVVVWSAMIAGYSRLGLVEEAKELFG 194

Query: 450 ------FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
                  E NLVS+N M+  +  N   ++A  +   +   G      T + +L     + 
Sbjct: 195 EMRSGGVEPNLVSWNGMLAGFGNNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLE 254

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
            +  G Q+H  +IK G  S+  + +A++ MY +C  V+   +VF E+E+  + S  + +T
Sbjct: 255 DVVVGAQVHGYVIKQGLGSDKFVVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLT 314

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           G +++G    ALE+F K     ++ N +T+ +++++CS  G   E  + FR M
Sbjct: 315 GLSRNGMVDTALEVFNKFKDQKMELNVVTWTSIIASCSQNGKDLEALELFRDM 367



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 79/283 (27%), Positives = 134/283 (47%), Gaps = 38/283 (13%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G   +A+    +M  +G  PD  T S +L +     +  +G  VH  + +  L  +  
Sbjct: 217 NNGFYDEAVGMFRMMLVQGFWPDGSTVSCVLPAVGCLEDVVVGAQVHGYVIKQGLGSDKF 276

Query: 115 ILNSLISLYSKCGDLNEANKI----------------------------------FKSMG 140
           ++++++ +Y KCG + E +++                                  FK   
Sbjct: 277 VVSAMLDMYGKCGCVKEMSRVFDEVEEMEIGSLNAFLTGLSRNGMVDTALEVFNKFKDQK 336

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            + ++V+W+S+I+S    GK ++A+ +F +M   G  PN     ++I AC N   +  G 
Sbjct: 337 MELNVVTWTSIIASCSQNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGK 396

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            I+ F L+ G FD DV VG ALIDM+ K G + L  A + FDKM+  N V W  ++    
Sbjct: 397 EIHCFSLRRGIFD-DVYVGSALIDMYAKCGRIQL--ARRCFDKMSALNLVSWNAVMKGYA 453

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
             G  ++ + +F  M+ SG  PD  T + V+SAC++  L   G
Sbjct: 454 MHGKAKETMEMFHMMLQSGQKPDLVTFTCVLSACAQNGLTEEG 496



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 92/205 (44%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+  +A+     M   G  P+  T   L+ +C        GK +H    R  +  +  
Sbjct: 353 QNGKDLEALELFRDMQAYGVEPNAVTIPSLIPACGNISALMHGKEIHCFSLRRGIFDDVY 412

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++LI +Y+KCG +  A + F  M +  ++VSW++++  Y   GK  + + MF  ML+ 
Sbjct: 413 VGSALIDMYAKCGRIQLARRCFDKM-SALNLVSWNAVMKGYAMHGKAKETMEMFHMMLQS 471

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+   F+ V+ AC+       G   Y  + +    +  +     L+ +  +    LE
Sbjct: 472 GQKPDLVTFTCVLSACAQNGLTEEGWRCYNSMSEEHGIEPKMEHYACLVTLLSRVG-KLE 530

Query: 235 SAYKVFDKMT-EKNTVGWTLMITRC 258
            AY +  +M  E +   W  +++ C
Sbjct: 531 EAYSIIKEMPFEPDACVWGALLSSC 555


>gi|297834086|ref|XP_002884925.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330765|gb|EFH61184.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 694

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/632 (37%), Positives = 370/632 (58%), Gaps = 7/632 (1%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+  A +VFD +       W  +I   ++    +DA+ ++  M L+   PD FT   ++ 
Sbjct: 68  DITFARQVFDDLPRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLK 127

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLD 349
           AC  L     G+ +H+   R G   DV V   L+ +YAKC   G    +R VF+   + +
Sbjct: 128 ACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGLIALYAKCRRLGC---ARTVFEGLPLPE 184

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             ++SWTAI++ Y Q+G    EA+++FS M +  V P+     SVL A   L D      
Sbjct: 185 RTIVSWTAIVSAYAQNG-EPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRS 243

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   +K G   +  +  SL +MYA+ G++  A+  F+ +   NL+ +N M+  YAKN  
Sbjct: 244 IHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGF 303

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           ++ A +L HE+ +  V     +  S +S  + +G++ +   +   + +S +  +  I +A
Sbjct: 304 AKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSA 363

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI M+++C +VE A  VF    DR+V+ W++MI G+  HG A  A+ ++  M  DG+ PN
Sbjct: 364 LIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGVHPN 423

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T++ +L AC+H+G++ EGW  F  M D H I  + +HYAC++DLLGR+G L +A E I
Sbjct: 424 DVTFLGLLIACNHSGMVREGWWFFNRMAD-HKINPQQQHYACIIDLLGRAGHLDQAYEVI 482

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           + MP+   V VW   L AC+ H   ELGK+AA+ +   DP +   ++ LSNLYA+A  W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGKYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VA +R RMKE+ L K+ GCSW+E   ++  F VG+ SHP+  EI  +++ +  ++KE G
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEGFRVGDKSHPRYEEIERQVEWIESRLKEGG 602

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++ + +  LH+L +E+  + L  HSE+I +A+GLIST +   +R+ KNLR C +CH A K
Sbjct: 603 FVANKDASLHDLNDEEAEETLCSHSERITIAYGLISTPQGTTLRITKNLRACVNCHAATK 662

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IS + GREIV+RD+NRFHH KDG CSC DYW
Sbjct: 663 LISKLVGREIVVRDTNRFHHFKDGVCSCGDYW 694



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/504 (25%), Positives = 241/504 (47%), Gaps = 14/504 (2%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           L T  G H D   Y+ L+ S          + +H+ L    L+ +  ++  LI   S  G
Sbjct: 12  LYTNSGIHSD-SFYASLIDSSTHKAQL---RQIHARLLVLGLQFSGFLITKLIHASSSYG 67

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           D+  A ++F  +  +  +  W+++I  Y       DA+ M+ +M      P+ + F  ++
Sbjct: 68  DITFARQVFDDL-PRPQVFPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLL 126

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD--KMTE 245
           +AC    ++ +G  ++  + + G F++DV V   LI ++ K    L  A  VF+   + E
Sbjct: 127 KACGGLSHLQMGRFVHAQVFRLG-FEADVFVQNGLIALYAKCR-RLGCARTVFEGLPLPE 184

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +  V WT +++   Q G P +A+ +F  M      PD   L  V++A + L+    G+ +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSI 244

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  ++ GL  +  +  SL  MYAKC   G V  ++ +FD+M   N++ W A+I+GY ++
Sbjct: 245 HASVMKMGLETEPDLLISLNTMYAKC---GQVATAKILFDKMKSPNLILWNAMISGYAKN 301

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G   K+A+ LF +MI   V P+  +  S + AC  +     A  +  +  +     D  +
Sbjct: 302 GFA-KDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFI 360

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            ++LI M+A+ G +E AR  F+   ++++V ++ M+  Y  +  + +A  L   +E  GV
Sbjct: 361 SSALIDMFAKCGSVECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAMERDGV 420

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             +  TF  LL   +  G + +G     R+           Y  +I +  R  +++ A++
Sbjct: 421 HPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYACIIDLLGRAGHLDQAYE 480

Query: 546 VFKEMEDR-NVISWTSMITGFAKH 568
           V K M  +  V  W ++++   KH
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKH 504



 Score =  179 bits (455), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 187/342 (54%), Gaps = 7/342 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q A+     M      PD  T+  LLK+C    +  +G+ VH+ + R   E +  + N L
Sbjct: 101 QDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQVFRLGFEADVFVQNGL 160

Query: 120 ISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           I+LY+KC  L  A  +F+ +   +R IVSW++++S+Y   G+ V+A+ +F +M ++   P
Sbjct: 161 IALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKP 220

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           +     +V+ A +  +++  G  I+  ++K G  +++  +  +L  M+ K    + +A  
Sbjct: 221 DCVALVSVLNAFTCLQDLEQGRSIHASVMKMG-LETEPDLLISLNTMYAKCG-QVATAKI 278

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FDKM   N + W  MI+   + G  +DAI LF +MI     PD  +++  +SAC+++  
Sbjct: 279 LFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGS 338

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
               + +  +  R+    DV +  +L+DM+AKC   GSV+ +R VFDR LD +V+ W+A+
Sbjct: 339 LEQARWMDEYVSRSDYRDDVFISSALIDMFAKC---GSVECARSVFDRTLDRDVVVWSAM 395

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           I GY    G+ +EA+ L+  M +  V PN  TF  +L AC +
Sbjct: 396 IVGYGLH-GQAREAISLYRAMERDGVHPNDVTFLGLLIACNH 436



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 76/267 (28%), Positives = 127/267 (47%), Gaps = 13/267 (4%)

Query: 45  PLSNRLIY--------HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           PL  R I         +  +G   +A+     M +    PD      +L +    ++   
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPVEALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQ 240

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ +H+ + +  LE    +L SL ++Y+KCG +  A  +F  M +  +++ W++MIS Y 
Sbjct: 241 GRSIHASVMKMGLETEPDLLISLNTMYAKCGQVATAKILFDKMKSP-NLILWNAMISGYA 299

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G   DAI +F EM+     P+    ++ I AC+   ++     +  ++ +  Y D DV
Sbjct: 300 KNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRD-DV 358

Query: 217 CVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            +  ALIDMF K GSV  E A  VFD+  +++ V W+ MI      G  R+AI L+  M 
Sbjct: 359 FISSALIDMFAKCGSV--ECARSVFDRTLDRDVVVWSAMIVGYGLHGQAREAISLYRAME 416

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSG 302
             G  P+  T  G++ AC+   +   G
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREG 443



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 78/366 (21%), Positives = 168/366 (45%), Gaps = 40/366 (10%)

Query: 399 GNLLDSNVAE----QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
            +L+DS+  +    Q++   +  G      +   LI   +  G +  AR+ F+ L    +
Sbjct: 25  ASLIDSSTHKAQLRQIHARLLVLGLQFSGFLITKLIHASSSYGDITFARQVFDDLPRPQV 84

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
             +N ++  Y++N + + A  +  +++   V   ++TF  LL     +  +  G  +HA+
Sbjct: 85  FPWNAIIRGYSRNNHFQDALLMYSKMQLARVSPDSFTFPHLLKACGGLSHLQMGRFVHAQ 144

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHGFAA 572
           + + GFE++  + N LI++Y++C  +  A  VF+   + +R ++SWT++++ +A++G   
Sbjct: 145 VFRLGFEADVFVQNGLIALYAKCRRLGCARTVFEGLPLPERTIVSWTAIVSAYAQNGEPV 204

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACS-----------HAGLISEGWK-------HFR 614
            ALEIF +M    +KP+ +  ++VL+A +           HA ++  G +          
Sbjct: 205 EALEIFSQMRKMDVKPDCVALVSVLNAFTCLQDLEQGRSIHASVMKMGLETEPDLLISLN 264

Query: 615 SMYDEHGIV-------QRMEH-----YACMVDLLGRSGSLTEALEFIRSM---PLSADVL 659
           +MY + G V        +M+      +  M+    ++G   +A++    M    +  D +
Sbjct: 265 TMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGFAKDAIDLFHEMINKDVRPDTI 324

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA-AHILLSNLYASAGHWEYVANIRKRM 718
              + + AC   G  E  +   E +   D +D       L +++A  G  E   ++  R 
Sbjct: 325 SITSAISACAQVGSLEQARWMDEYVSRSDYRDDVFISSALIDMFAKCGSVECARSVFDRT 384

Query: 719 KERNLI 724
            +R+++
Sbjct: 385 LDRDVV 390



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 94/209 (44%), Gaps = 4/209 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  + AI     M  K   PD  + +  + +C +  +    + +   ++RS    +
Sbjct: 298 YAKNGFAKDAIDLFHEMINKDVRPDTISITSAISACAQVGSLEQARWMDEYVSRSDYRDD 357

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I ++LI +++KCG +  A  +F    + RD+V WS+MI  Y   G+  +AI ++  M 
Sbjct: 358 VFISSALIDMFAKCGSVECARSVFDRTLD-RDVVVWSAMIVGYGLHGQAREAISLYRAME 416

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN+  F  ++ AC+++  V  G   +  +             C +ID+  +    
Sbjct: 417 RDGVHPNDVTFLGLLIACNHSGMVREGWWFFNRMADHKINPQQQHYAC-IIDLLGRAG-H 474

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRCTQ 260
           L+ AY+V   M  +     W  +++ C +
Sbjct: 475 LDQAYEVIKCMPVQPGVTVWGALLSACKK 503


>gi|297804786|ref|XP_002870277.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297316113|gb|EFH46536.1| hypothetical protein ARALYDRAFT_493409 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 684

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 254/678 (37%), Positives = 379/678 (55%), Gaps = 7/678 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++   +T ++ +G +++  ++K         +   LI+M+ K     ESA  V      
Sbjct: 12  LLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLD-HPESARLVLRLTPA 70

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N V WT +++   Q G    A+  F +M   G  P+ FT   V  A + L L  +GKQ+
Sbjct: 71  RNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPVTGKQI 130

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+ A++ G  LDV VGCS  DMY K  +    DD+RK+FD + + N+ +W A I+  V +
Sbjct: 131 HALAVKCGRILDVFVGCSAFDMYCKTRLR---DDARKLFDEIPERNLETWNAYISNSV-T 186

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
            GR KEA++ F +  +    PN  TF   L AC + L  ++  Q++    + G   D  V
Sbjct: 187 DGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDVSV 246

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            N LI  Y +  ++  +   F  +  KN VS+ ++V AY +N   EKA  L        V
Sbjct: 247 YNGLIDFYGKCKQIRSSEIIFAEMGMKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKEIV 306

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
            TS +  +S+LS  + +  +  G  IHA  +K+  E N  + +AL+ MY +C  +E + Q
Sbjct: 307 ETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCGCIEDSEQ 366

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI--KPNGITYIAVLSACSHA 603
            F EM ++N+++  S+I G+A  G    AL +F  M   G    PN +T++++LSACS A
Sbjct: 367 AFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLSACSRA 426

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           G +  G K F SM   +GI    EHY+C+VD+LGR+G + +A EFI+ MP+   + VW  
Sbjct: 427 GAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKPTISVWGA 486

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
              ACR+HG   LG  AAE + + DP+D   H+LLSN +A+AG W     +R+ MK   +
Sbjct: 487 LQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEANTVREEMKGVGI 546

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K AG SWI   N+VH F   + SH    EI   L +L  K++  GY PD    L++LEE
Sbjct: 547 KKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTKLRNKMEAAGYKPDLKLSLYDLEE 606

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E+K   +  HSEK+A+AFGL++   S PIR+ KNLR+CGDCH+  K++S    REI++RD
Sbjct: 607 EEKAAEVSHHSEKLALAFGLVALPLSVPIRITKNLRICGDCHSFFKFVSGSVKREIIVRD 666

Query: 844 SNRFHHIKDGKCSCNDYW 861
           +NRFH  KDG CSC DYW
Sbjct: 667 NNRFHRFKDGICSCKDYW 684



 Score =  246 bits (627), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 156/496 (31%), Positives = 251/496 (50%), Gaps = 12/496 (2%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFK 137
           D   LLLK+ I + +  LG++VH+ + ++   P    L N LI++YSK  D  E+ ++  
Sbjct: 7   DALGLLLKNAISTSSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL-DHPESARLVL 65

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            +   R++VSW+S++S     G    A+  F EM   G  PN++ F  V +A ++     
Sbjct: 66  RLTPARNVVSWTSLVSGLAQNGHFSTALFEFFEMRREGVAPNDFTFPCVFKAVASLRLPV 125

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  I+   +KCG    DV VGC+  DM+ K  +  + A K+FD++ E+N   W   I+ 
Sbjct: 126 TGKQIHALAVKCGRI-LDVFVGCSAFDMYCKTRLR-DDARKLFDEIPERNLETWNAYISN 183

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
               G P++AI  F++    G  P+  T  G ++ACS+  L   G Q+H    R+G   D
Sbjct: 184 SVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTD 243

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V V   L+D Y KC     +  S  +F  M   N +SW +++  YVQ+   D++A  L+ 
Sbjct: 244 VSVYNGLIDFYGKCK---QIRSSEIIFAEMGMKNAVSWCSLVAAYVQN-HEDEKASVLYL 299

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
              +  V  + F  +SVL AC  +    +   ++ HAVK     +  VG++L+ MY + G
Sbjct: 300 RSRKEIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERNIFVGSALVDMYGKCG 359

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA--YTFASL 495
            +ED+ +AF+ + EKNLV+ N+++  YA     + A  L  ++   G G +    TF SL
Sbjct: 360 CIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSL 419

Query: 496 LSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           LS  S  GA+  G +I   +  + G E     Y+ ++ M  R   VE AF+  K+M  + 
Sbjct: 420 LSACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCIVDMLGRAGMVEQAFEFIKKMPIKP 479

Query: 555 VIS-WTSMITGFAKHG 569
            IS W ++      HG
Sbjct: 480 TISVWGALQNACRMHG 495



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 204/442 (46%), Gaps = 41/442 (9%)

Query: 31  SSSPPFIAQ------PTTSEPLSNRLIYHL-----------------NDGRVQKAIFTLD 67
           S  PPF+A            P S RL+  L                  +G    A+F   
Sbjct: 38  SPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLVSGLAQNGHFSTALFEFF 97

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
            M ++G  P+  T+  + K+    R    GK +H+L  +     +  +  S   +Y K  
Sbjct: 98  EMRREGVAPNDFTFPCVFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
             ++A K+F  +  +R++ +W++ IS+ V  G+  +AI  F+E   +G  PN   F   +
Sbjct: 158 LRDDARKLFDEI-PERNLETWNAYISNSVTDGRPKEAIEAFIEFRRIGGQPNSITFCGFL 216

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            ACS+   + +G  ++G + + G FD+DV V   LID + K    + S+  +F +M  KN
Sbjct: 217 NACSDGLLLDLGMQMHGLVFRSG-FDTDVSVYNGLIDFYGKCK-QIRSSEIIFAEMGMKN 274

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  ++    Q      A  L+L           F +S V+SAC+ +     G+ +H+
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKEIVETSDFMISSVLSACAGMAGLELGRSIHA 334

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            A++  +  ++ VG +LVDMY KC   G ++DS + FD M + N+++  ++I GY   G 
Sbjct: 335 HAVKACVERNIFVGSALVDMYGKC---GCIEDSEQAFDEMPEKNLVTLNSLIGGYAHQGQ 391

Query: 368 RDKEAVKLFSDMIQGQV--APNHFTFASVLKACGNLLDSNVAEQVY-----THAVKRGRA 420
            D  A+ LF DM       APN+ TF S+L AC          +++     T+ ++ G  
Sbjct: 392 VDM-ALALFEDMAPRGCGPAPNYMTFVSLLSACSRAGAVENGMKIFDSMKSTYGIEPGAE 450

Query: 421 LDDCVGNSLISMYARSGRMEDA 442
              C+    + M  R+G +E A
Sbjct: 451 HYSCI----VDMLGRAGMVEQA 468



 Score =  105 bits (262), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 94/409 (22%), Positives = 177/409 (43%), Gaps = 20/409 (4%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + DGR ++AI       + G  P+  T+   L +C       LG  +H L+ RS  + + 
Sbjct: 185 VTDGRPKEAIEAFIEFRRIGGQPNSITFCGFLNACSDGLLLDLGMQMHGLVFRSGFDTDV 244

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + N LI  Y KC  +  +  IF  MG K + VSW S++++YV   +   A  +++   +
Sbjct: 245 SVYNGLIDFYGKCKQIRSSEIIFAEMGMK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
                +++  S+V+ AC+    + +G  I+   +K    + ++ VG AL+DM+ K    +
Sbjct: 304 EIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK-ACVERNIFVGSALVDMYGKCGC-I 361

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF--LPDRFTLSGVVS 291
           E + + FD+M EKN V    +I      G    A+ LF DM   G    P+  T   ++S
Sbjct: 362 EDSEQAFDEMPEKNLVTLNSLIGGYAHQGQVDMALALFEDMAPRGCGPAPNYMTFVSLLS 421

Query: 292 ACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ACS      +G ++      ++ I  G     C+    VDM  +    G V+ + +   +
Sbjct: 422 ACSRAGAVENGMKIFDSMKSTYGIEPGAEHYSCI----VDMLGRA---GMVEQAFEFIKK 474

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM--IQGQVAPNHFTFASVLKACGNLLDS 404
           M     +S    +    +  G+    +    ++  +  + + NH   ++   A G   ++
Sbjct: 475 MPIKPTISVWGALQNACRMHGKPHLGILAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 534

Query: 405 N-VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           N V E++    +K+G         + +  +    R     K  +++  K
Sbjct: 535 NTVREEMKGVGIKKGAGYSWITVKNQVHAFQAKDRSHKMNKEIQTMLTK 583


>gi|302773325|ref|XP_002970080.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
 gi|300162591|gb|EFJ29204.1| hypothetical protein SELMODRAFT_171135 [Selaginella moellendorffii]
          Length = 829

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 257/819 (31%), Positives = 445/819 (54%), Gaps = 22/819 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH-SLLTRSKLEP 111
           +  +G   +A+     M  +G  PD  +   +L +     +   G+  H ++   S L  
Sbjct: 16  YARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQGEFFHRTVCEASGLGS 75

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           + V+  +++++Y++CG ++ A + F +M   R++VSWS+MI++Y  RG   DA+ +FV M
Sbjct: 76  DVVVATAVLTMYNRCGSVSHARRAFDAM-VVRNVVSWSAMIAAYAQRGHPGDALELFVRM 134

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G   N   F +V+ AC++   +A+G  I+  ++  G    DV +G  +++M+ K G 
Sbjct: 135 DHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGE 194

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           VDL  A +VF++M  KN V W  MI  C++    ++A  L  +M L G  P++ TL  V+
Sbjct: 195 VDL--AREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVI 252

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC+ ++    G+ +H      GL  D  V  +LV++Y KC   G +  +R   + +   
Sbjct: 253 DACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKC---GKLRAARHALEGIETR 309

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + +SWT ++  Y + G   K A+ +   M    V  + FTF ++L++C  +    + E++
Sbjct: 310 DKISWTTLLAAYARHG-HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEI 368

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLN 469
           +    + G  LD  +  +L+ MY + G  + AR+AF+ + + +++  +N ++ AY     
Sbjct: 369 HDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQ 428

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            ++   +   +   GV   A TF S+L   +S+ A+G G   H+R+++ G      + +A
Sbjct: 429 GKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASA 488

Query: 530 ------LISMYSRC---ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
                 +I+MY++C   A+ +A F   +     +V++W++M+  +++ G +  AL  FY 
Sbjct: 489 DLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYS 548

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M  +G+KP+ +++++ ++ CSH+GL+ E    F S+  +HGI     H+AC+VDLL R+G
Sbjct: 549 MQQEGVKPDSVSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAG 608

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            + EA   +R  PL A    W T L ACR +GD E  +           +  +A+ LL++
Sbjct: 609 WIREAEALMRRAPLGAHHSTWMTLLSACRTYGDLE--RARRVAARLASLRSGSAYSLLAS 666

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS-HPKTLEIYAELD 759
           ++  +  W+ V N R+ + ER  I + GCSWIE +N+V++F  G+    P+  EI+AEL+
Sbjct: 667 VFCLSRKWDDVRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELE 726

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L ++I++ GY  D    +H+  E++K   L  HSEK+AV FGLIST +  P+R+ KN+ 
Sbjct: 727 RLCVEIRKAGYERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIG 786

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           VC DCH  IK IS V  R I LRD   FH    G CSC 
Sbjct: 787 VCQDCHEVIKCISEVADRVITLRDDRSFHQFSHGSCSCK 825



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 143/485 (29%), Positives = 242/485 (49%), Gaps = 10/485 (2%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M +++   W L I    + G    A+ +F  M L G  PDR +   ++ A + L   + G
Sbjct: 1   MADRSPFSWNLAIAEYARNGHHARALEIFRAMALEGVAPDRVSCIAILDAFASLGDLSQG 60

Query: 303 KQLHSWAIR-TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           +  H      +GL  DV V  +++ MY +C   GSV  +R+ FD M+  NV+SW+A+I  
Sbjct: 61  EFFHRTVCEASGLGSDVVVATAVLTMYNRC---GSVSHARRAFDAMVVRNVVSWSAMIAA 117

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y Q G    +A++LF  M    V  N  TF SVL AC ++    + + ++   V  G   
Sbjct: 118 YAQRG-HPGDALELFVRMDHEGVKANAITFVSVLDACASMRAIALGKSIHERIVADGLLG 176

Query: 422 DDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           DD + GN++++MY + G ++ AR+ FE +  KN V++NTM+ A +++   ++AF LL E+
Sbjct: 177 DDVILGNTIVNMYGKCGEVDLAREVFERMEAKNAVTWNTMIAACSRHDRYKEAFALLGEM 236

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  G+  +  T  S++   + + +I +G  +H  +   G ES++ + NAL+++Y +C  +
Sbjct: 237 DLDGLRPNKITLVSVIDACAWMQSIVRGRIVHEIVAGEGLESDNTVANALVNLYGKCGKL 296

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
            AA    + +E R+ ISWT+++  +A+HG   RA+ +  +M  +G+K +  T++ +L +C
Sbjct: 297 RAARHALEGIETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESC 356

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
                ++ G +       E GI         +VD+ G+ G+   A      M    DV V
Sbjct: 357 VAIAALALG-EEIHDRLAESGIELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTV 415

Query: 661 WRTFLGA--CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           W   L A   R  G   LG   A M L+    D    + + +  AS            RM
Sbjct: 416 WNALLAAYVLRDQGKETLGIF-ARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRM 474

Query: 719 KERNL 723
            ER L
Sbjct: 475 LERGL 479



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 186/420 (44%), Gaps = 59/420 (14%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  +   G  ++AI  +  M  +G   D  T+  LL+SC+      LG+ +H  L  S +
Sbjct: 318 LAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGI 377

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E + V+  +L+ +Y KCG+ + A + F  M + RD+  W++++++YV R +  + + +F 
Sbjct: 378 ELDPVLQTALVDMYGKCGNPDAARRAFDRMSDVRDVTVWNALLAAYVLRDQGKETLGIFA 437

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL-----ID 224
            M   G  P+   F +++ AC++   + +G + +  +L+ G FD        L     I+
Sbjct: 438 RMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVIN 497

Query: 225 MFVK-GSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           M+ K GS+ D ++ +    +    + V W+ M+   +Q G   +A+R F  M   G  PD
Sbjct: 498 MYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPD 557

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV----GCSLVDMYAKCTVDGSVD 338
             +    ++ CS           HS  +R  +A    +    G +  + +  C VD    
Sbjct: 558 SVSFVSAIAGCS-----------HSGLVREAVAFFTSLRHDHGIAPTEAHFACLVD---- 602

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
               +  R              G++    R+ EA+     M +  +  +H T+ ++L AC
Sbjct: 603 ----LLSR-------------AGWI----REAEAL-----MRRAPLGAHHSTWMTLLSAC 636

Query: 399 GNL--LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
                L+          +++ G A      + L S++  S + +D R A +SL E+  ++
Sbjct: 637 RTYGDLERARRVAARLASLRSGSAY-----SLLASVFCLSRKWDDVRNARQSLVERGFIT 691


>gi|125605235|gb|EAZ44271.1| hypothetical protein OsJ_28890 [Oryza sativa Japonica Group]
          Length = 630

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 249/638 (39%), Positives = 379/638 (59%), Gaps = 32/638 (5%)

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-----LDMILSGFLPDR 283
           G V L   Y  FD   EK+ V W  M+    + G   +A  LF      D+I    L   
Sbjct: 20  GLVSLARHY--FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISWNALMSG 77

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           +   G +S   EL     G+ + SW I             +V  YA+    G + ++R++
Sbjct: 78  YVQWGKMSEARELFDRMPGRDVVSWNI-------------MVSGYAR---RGDMVEARRL 121

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           FD     +V +WTA+++GY Q+G  + EA ++F  M +      +   A+ ++    ++D
Sbjct: 122 FDAAPVRDVFTWTAVVSGYAQNGMLE-EARRVFDAMPERNAVSWNAMVAAYIQR--RMMD 178

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
              A++++     R  A      N++++ YA++G +E+A+  F+++ +K+ VS+  M+ A
Sbjct: 179 E--AKELFNMMPCRNVA----SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAA 232

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           Y++   SE+  +L  E+   G   +   FA +LS  + I A+  G Q+H R+I++G+   
Sbjct: 233 YSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVG 292

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
             + NAL++MY +C N+E A   F+EME+R+V+SW +MI G+A+HGF   ALEIF  M  
Sbjct: 293 CFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEIFDMMRT 352

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
              KP+ IT + VL+ACSH+GL+ +G  +F SM+ + G+  + EHY CM+DLLGR+G L 
Sbjct: 353 TSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLA 412

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           EA + ++ MP   D  +W   LGA R+H + ELG+ AAE I E +P++   ++LLSN+YA
Sbjct: 413 EAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVLLSNIYA 472

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
           S+G W     +R  M+ER + K  G SWIE  NKVH F  G+  HP+  +IYA L+ L +
Sbjct: 473 SSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAFLEDLDM 532

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           ++K+ GY+  T+ VLH++EEE+K   L  HSEK+AVA+G+++    +PIRV KNLRVCGD
Sbjct: 533 RMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKNLRVCGD 592

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH A KYIS + GR I+LRDSNRFHH + G CSC DYW
Sbjct: 593 CHNAFKYISAIEGRLILLRDSNRFHHFRGGSCSCGDYW 630



 Score =  149 bits (376), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 216/465 (46%), Gaps = 49/465 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSL-LTRSKLEP 111
           H N G V  A    DL  +K    D  +++ +L + +R+     G++  +  L  S+ E 
Sbjct: 16  HANHGLVSLARHYFDLAPEK----DAVSWNGMLAAYVRN-----GRVEEARGLFNSRTEW 66

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF--- 168
           + +  N+L+S Y + G ++EA ++F  M   RD+VSW+ M+S Y  RG  V+A  +F   
Sbjct: 67  DVISWNALMSGYVQWGKMSEARELFDRMPG-RDVVSWNIMVSGYARRGDMVEARRLFDAA 125

Query: 169 -------VEMLELGFCPN------EYCFSAVIRACSNTENVAIGHIIYGFLLKCG--YFD 213
                     +  G+  N         F A+    + + N  +   I   ++      F+
Sbjct: 126 PVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVAAYIQRRMMDEAKELFN 185

Query: 214 SDVCVGCALIDMFVKGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
              C   A  +  + G      LE A  VFD M +K+ V W  M+   +Q GC  + ++L
Sbjct: 186 MMPCRNVASWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSWAAMLAAYSQGGCSEETLQL 245

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F++M   G   +R   + V+S C+++     G QLH   IR G  +   VG +L+ MY K
Sbjct: 246 FIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFK 305

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G+++D+R  F+ M + +V+SW  +I GY +  G  KEA+++F  M      P+  T
Sbjct: 306 C---GNMEDARNAFEEMEERDVVSWNTMIAGYARH-GFGKEALEIFDMMRTTSTKPDDIT 361

Query: 391 FASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
              VL AC +  L++  ++   Y+     G          +I +  R+GR+ +A    + 
Sbjct: 362 LVGVLAACSHSGLVEKGIS-YFYSMHHDFGVTAKPEHYTCMIDLLGRAGRLAEAHDLMKD 420

Query: 449 L-FEKNLVSYNTMVDAYAKNLN-------SEKAFELLHEIEDTGV 485
           + FE +   +  ++ A   + N       +EK FEL  E E+ G+
Sbjct: 421 MPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFEL--EPENAGM 463



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 110/440 (25%), Positives = 199/440 (45%), Gaps = 54/440 (12%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD V+++ MISS+ N G    A H F    +L    +   ++ ++ A      V      
Sbjct: 4   RDSVTYNVMISSHANHGLVSLARHYF----DLAPEKDAVSWNGMLAAYVRNGRVEEAR-- 57

Query: 203 YGFLLKCGYFDS----DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
                  G F+S    DV    AL+  +V+    +  A ++FD+M  ++ V W +M++  
Sbjct: 58  -------GLFNSRTEWDVISWNALMSGYVQWG-KMSEARELFDRMPGRDVVSWNIMVSGY 109

Query: 259 TQLGCPRDAIRLF----------LDMILSGF---------------LPDRFTLS--GVVS 291
            + G   +A RLF             ++SG+               +P+R  +S   +V+
Sbjct: 110 ARRGDMVEARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAMPERNAVSWNAMVA 169

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A  +  +    K+L           +V    +++  YA+    G +++++ VFD M   +
Sbjct: 170 AYIQRRMMDEAKEL----FNMMPCRNVASWNTMLTGYAQA---GMLEEAKAVFDTMPQKD 222

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            +SW A++  Y Q GG  +E ++LF +M +     N   FA VL  C ++       Q++
Sbjct: 223 AVSWAAMLAAYSQ-GGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLH 281

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              ++ G  +   VGN+L++MY + G MEDAR AFE + E+++VS+NTM+  YA++   +
Sbjct: 282 GRLIRAGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGK 341

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNAL 530
           +A E+   +  T       T   +L+  S  G + KG    ++     G  +    Y  +
Sbjct: 342 EALEIFDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCM 401

Query: 531 ISMYSRCANVEAAFQVFKEM 550
           I +  R   +  A  + K+M
Sbjct: 402 IDLLGRAGRLAEAHDLMKDM 421



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/254 (24%), Positives = 120/254 (47%), Gaps = 18/254 (7%)

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D    N +IS +A  G +  AR  F+   EK+ VS+N M+ AY +N   E+A  L +   
Sbjct: 5   DSVTYNVMISSHANHGLVSLARHYFDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRT 64

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           +  V     ++ +L+SG    G + +  ++  R+      S    +N ++S Y+R  ++ 
Sbjct: 65  EWDV----ISWNALMSGYVQWGKMSEARELFDRMPGRDVVS----WNIMVSGYARRGDMV 116

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A ++F     R+V +WT++++G+A++G    A  +F  M     + N +++ A+++A  
Sbjct: 117 EARRLFDAAPVRDVFTWTAVVSGYAQNGMLEEARRVFDAM----PERNAVSWNAMVAAYI 172

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
              ++ E  + F  M       + +  +  M+    ++G L EA     +MP   D + W
Sbjct: 173 QRRMMDEAKELFNMM-----PCRNVASWNTMLTGYAQAGMLEEAKAVFDTMP-QKDAVSW 226

Query: 662 RTFLGACRVHGDTE 675
              L A    G +E
Sbjct: 227 AAMLAAYSQGGCSE 240


>gi|414867973|tpg|DAA46530.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 923

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/810 (31%), Positives = 451/810 (55%), Gaps = 11/810 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G +++A+     M ++G   + +  + ++  C    +   G  V + +  S L  +  
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSLI+++     + +A ++F  M  +RD +SW++MIS Y +         +  +M   
Sbjct: 182 VANSLITMFGNLRRVQDAERLFDRM-EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+     +++  C++++ VA+G  I+   +  G   S   +  AL++M+      L+
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN-ALVNMYSTAG-KLD 298

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSAC 293
            A  +F  M+ ++ + W  MI+   Q     +A+     ++ +    P+  T S  + AC
Sbjct: 299 EAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S  E   +G+ +H+  ++  L   + +G SL+ MY+KC    S++D+ +VF+ M  ++V+
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCN---SMEDTERVFESMPCYDVV 415

Query: 354 SWTAIITGYVQSGGRD-KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD-SNVAEQVY 411
           S   +  GY  +   D   A+++FS M    + PN+ T  ++   C +L D  +    ++
Sbjct: 416 SCNVLTGGY--AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLH 473

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            +  + G   D+ + NSLI+MYA  G +E +   F  +  K+++S+N ++ A  ++   E
Sbjct: 474 AYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A +L  + +  G     +  A  LS ++++ ++ +G Q+H   +K+G + +  + NA +
Sbjct: 534 EAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM 593

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  ++   +   +   R    W ++I+G+A++G+   A + F  M++ G KP+ +
Sbjct: 594 DMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYV 653

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++A+LSACSHAGLI +G  ++ SM    G+   ++H  C+VDLLGR G   EA +FI  
Sbjct: 654 TFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDE 713

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+  + L+WR+ L + R H + ++G+ AA+ +LE DP D +A++LLSNLYA+   W  V
Sbjct: 714 MPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDV 773

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
             +R  MK   L K   CSW++  N+V  F +G+ SH    +IY +LD++ LK++E GY+
Sbjct: 774 DKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYV 833

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
            DT+  LH+ +EEQK   L+ HSEK+A+A+GL+   +   IR+FKNLRVC DCH   K +
Sbjct: 834 ADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLV 893

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           SMV  REIVLRD  RFH  K G CSC+D+W
Sbjct: 894 SMVFHREIVLRDPYRFHQFKHGSCSCSDFW 923



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 152/581 (26%), Positives = 282/581 (48%), Gaps = 17/581 (2%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G  +H+L  R+ L  N  I  +L+ LY   G +  A ++F  M  +R++VSW++++ +  
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEM-PQRNVVSWTAIMVALS 121

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G   +A+  +  M + G   N    + V+  C   E+   G  +   ++  G   + V
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL-THV 180

Query: 217 CVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            V  +LI MF  G++  ++ A ++FD+M E++ + W  MI+  +          +  DM 
Sbjct: 181 SVANSLITMF--GNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
                PD  TL  +VS C+  +L   G  +HS  + +GL   V +  +LV+MY+     G
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTA---G 295

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASV 394
            +D++  +F  M   +V+SW  +I+ YVQS     EA++    ++Q  +  PN  TF+S 
Sbjct: 296 KLDEAESLFRNMSRRDVISWNTMISSYVQSNS-CVEALETLGQLLQTDEGPPNSMTFSSA 354

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEK 452
           L AC +     +      HA+   R+L +   +GNSL++MY++   MED  + FES+   
Sbjct: 355 LGACSS--PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCY 412

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI-GKGEQI 511
           ++VS N +   YA   +   A  +   +  TG+  +  T  +L     S+G +   G  +
Sbjct: 413 DVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPL 472

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA + ++G  S+  I N+LI+MY+ C ++E++  +F  + +++VISW ++I    +HG  
Sbjct: 473 HAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRG 532

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A+++F      G K +       LS+ ++   + EG +    +  ++G+         
Sbjct: 533 EEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQ-LHGLSVKNGLDCDSHVVNA 591

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            +D+ G+ G +   L+ +   P       W T +     +G
Sbjct: 592 TMDMYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYG 631



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 261/537 (48%), Gaps = 11/537 (2%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN---TENVAIG 199
           R   SW + +S     G +  A  +   M E     + +  ++++ AC +    E  A G
Sbjct: 4   RTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACG 63

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+    + G    +V +G AL+ ++    + L +A ++F +M ++N V WT ++   +
Sbjct: 64  AAIHALTHRAGLM-GNVYIGTALLHLYGSRGLVL-NAQRLFWEMPQRNVVSWTAIMVALS 121

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             GC  +A+  +  M   G + +   L+ VVS C  LE   +G Q+ +  + +GL   V 
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  SL+ M+        V D+ ++FDRM + + +SW A+I+ Y       K  + L SDM
Sbjct: 182 VANSLITMFGNLR---RVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVL-SDM 237

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
             G+V P+  T  S++  C +     +   +++  V  G      + N+L++MY+ +G++
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG-TSAYTFASLLSG 498
           ++A   F ++  ++++S+NTM+ +Y ++ +  +A E L ++  T  G  ++ TF+S L  
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            SS  A+  G  IHA I++   ++   I N+L++MYS+C ++E   +VF+ M   +V+S 
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
             +  G+A     A A+ +F  M   GIKPN IT I +   C   G +        +   
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           + G++        ++ +    G L E+   I S   +  V+ W   + A   HG  E
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDL-ESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 198/420 (47%), Gaps = 19/420 (4%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFL-----DMILSGFLPDRFTLSGVVSACSE-- 295
           M  + +  W   ++ C + G    A  L       D+ LSGF      L+ +V+AC    
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGF-----ALASLVTACEHRG 55

Query: 296 -LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
             E    G  +H+   R GL  +V +G +L+ +Y      G V +++++F  M   NV+S
Sbjct: 56  WQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGS---RGLVLNAQRLFWEMPQRNVVS 112

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTAI+   + S G  +EA+  +  M +  V  N    A+V+  CG L D     QV  H 
Sbjct: 113 WTAIMVA-LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHV 171

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           V  G      V NSLI+M+    R++DA + F+ + E++ +S+N M+  Y+      K F
Sbjct: 172 VVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCF 231

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            +L ++    V     T  SL+S  +S   +  G  IH+  + SG   +  + NAL++MY
Sbjct: 232 IVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMY 291

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML-ADGIKPNGITY 593
           S    ++ A  +F+ M  R+VISW +MI+ + +      ALE   ++L  D   PN +T+
Sbjct: 292 STAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTF 351

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            + L ACS    +  G +   +M  +  +   +     ++ +  +  S+ +      SMP
Sbjct: 352 SSALGACSSPEALMNG-RTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410


>gi|356510758|ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 365/608 (60%), Gaps = 10/608 (1%)

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           ++  C +   P  A+ +   M   G   D  T S ++  C        GK++H      G
Sbjct: 257 LLNHCYRRDLP-SAMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNG 315

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
                 +   L++MY K  +   +++++ +FD+M + NV+SWT +I+ Y  +   D+ A+
Sbjct: 316 YHPKTFLTNILINMYVKFNL---LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDR-AM 371

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
           +L + M +  V PN FTF+SVL+AC  L D    +Q+++  +K G   D  V ++LI +Y
Sbjct: 372 RLLAFMFRDGVMPNMFTFSSVLRACERLYD---LKQLHSWIMKVGLESDVFVRSALIDVY 428

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           ++ G + +A K F  +   + V +N+++ A+A++ + ++A  L   +   G      T  
Sbjct: 429 SKMGELLEALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRRVGFPADQSTLT 488

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+L   +S+  +  G Q H  ++K  F+ +  + NAL+ MY +C ++E A  +F  M  +
Sbjct: 489 SVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKCGSLEDAKFIFNRMAKK 546

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +VISW++MI G A++GF+  AL +F  M   G KPN IT + VL ACSHAGL++EGW +F
Sbjct: 547 DVISWSTMIAGLAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEGWYYF 606

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
           RSM + +GI    EHY CM+DLLGR+  L + ++ I  M    DV+ WRT L ACR   +
Sbjct: 607 RSMNNLYGIDPGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLLDACRARQN 666

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            +L  +AA+ IL+ DPQD  A++LLSN+YA +  W  VA +R+ MK+R + KE GCSWIE
Sbjct: 667 VDLATYAAKEILKLDPQDTGAYVLLSNIYAISKRWNDVAEVRRTMKKRGIRKEPGCSWIE 726

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
            + ++H F +G+ SHP+  EI  +L+Q   ++   GY+PDTNFVL +LE EQ+   L  H
Sbjct: 727 VNKQIHAFILGDKSHPQIDEINRQLNQFICRLAGAGYVPDTNFVLQDLEGEQREDSLRYH 786

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+ FG++S  K K IR++KNL++CGDCH   K I+ +  R IV+RD  R+HH +DG
Sbjct: 787 SEKLAIVFGIMSFPKEKTIRIWKNLKICGDCHKFAKLIAELEQRHIVIRDPIRYHHFQDG 846

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 847 VCSCGDYW 854



 Score =  192 bits (488), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 144/460 (31%), Positives = 230/460 (50%), Gaps = 29/460 (6%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           +  P    P +  L+ H     +  A+  LD M ++G   D  TYS L+K C+       
Sbjct: 244 LVSPHYVPPETESLLNHCYRRDLPSAMHVLDSMERRGVWADSITYSELIKCCLAHGAVRE 303

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK VH  +  +   P + + N LI++Y K   L EA  +F  M  +R++VSW++MIS+Y 
Sbjct: 304 GKRVHRHIFSNGYHPKTFLTNILINMYVKFNLLEEAQVLFDKMP-ERNVVSWTTMISAYS 362

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           N      A+ +   M   G  PN + FS+V+RAC    ++   H    +++K G  +SDV
Sbjct: 363 NAQLNDRAMRLLAFMFRDGVMPNMFTFSSVLRACERLYDLKQLH---SWIMKVG-LESDV 418

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  ALID++ K    LE A KVF +M   ++V W  +I    Q     +A+ L+  M  
Sbjct: 419 FVRSALIDVYSKMGELLE-ALKVFREMMTGDSVVWNSIIAAFAQHSDGDEALHLYKSMRR 477

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
            GF  D+ TL+ V+ AC+ L L   G+Q H   ++     D+ +  +L+DMY KC   GS
Sbjct: 478 VGFPADQSTLTSVLRACTSLSLLELGRQAHVHVLK--FDQDLILNNALLDMYCKC---GS 532

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVL 395
           ++D++ +F+RM   +V+SW+ +I G  Q+G    EA+ LF  M +QG   PNH T   VL
Sbjct: 533 LEDAKFIFNRMAKKDVISWSTMIAGLAQNGF-SMEALNLFESMKVQGP-KPNHITILGVL 590

Query: 396 KACGNLLDSNVAEQVYT-----HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL- 449
            AC +    N     +      + +  GR    C    ++ +  R+ +++D  K    + 
Sbjct: 591 FACSHAGLVNEGWYYFRSMNNLYGIDPGREHYGC----MLDLLGRAEKLDDMVKLIHEMN 646

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-----EDTG 484
            E ++V++ T++DA     N + A     EI     +DTG
Sbjct: 647 CEPDVVTWRTLLDACRARQNVDLATYAAKEILKLDPQDTG 686



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 200/402 (49%), Gaps = 15/402 (3%)

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+H+   M   G   +   +S +I+ C     V  G  ++  +   GY          LI
Sbjct: 269 AMHVLDSMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNI-LI 327

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           +M+VK ++ LE A  +FDKM E+N V WT MI+  +       A+RL   M   G +P+ 
Sbjct: 328 NMYVKFNL-LEEAQVLFDKMPERNVVSWTTMISAYSNAQLNDRAMRLLAFMFRDGVMPNM 386

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           FT S V+ AC  L      KQLHSW ++ GL  DV V  +L+D+Y+K    G + ++ KV
Sbjct: 387 FTFSSVLRACERL---YDLKQLHSWIMKVGLESDVFVRSALIDVYSKM---GELLEALKV 440

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F  M+  + + W +II  + Q    D EA+ L+  M +     +  T  SVL+AC +L  
Sbjct: 441 FREMMTGDSVVWNSIIAAFAQHSDGD-EALHLYKSMRRVGFPADQSTLTSVLRACTSLSL 499

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
             +  Q + H +K  +  D  + N+L+ MY + G +EDA+  F  + +K+++S++TM+  
Sbjct: 500 LELGRQAHVHVLKFDQ--DLILNNALLDMYCKCGSLEDAKFIFNRMAKKDVISWSTMIAG 557

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS--GFE 521
            A+N  S +A  L   ++  G   +  T   +L   S  G + +G   + R + +  G +
Sbjct: 558 LAQNGFSMEALNLFESMKVQGPKPNHITILGVLFACSHAGLVNEG-WYYFRSMNNLYGID 616

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMI 562
                Y  ++ +  R   ++   ++  EM  + +V++W +++
Sbjct: 617 PGREHYGCMLDLLGRAEKLDDMVKLIHEMNCEPDVVTWRTLL 658


>gi|188509949|gb|ACD56635.1| putative pentatricopeptide repeat protein [Gossypium raimondii]
          Length = 667

 Score =  465 bits (1196), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 248/744 (33%), Positives = 406/744 (54%), Gaps = 79/744 (10%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+S Y+ CGDL E  ++F +M  K+++  W+ M+S Y                       
Sbjct: 2   LVSFYATCGDLKEGRRVFDTM-EKKNVYLWNFMVSEYA---------------------- 38

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
                                        K G F   +C+   +++  ++G    ESA +
Sbjct: 39  -----------------------------KIGDFKESICLFKIMVEKGIEGKRS-ESASE 68

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FDK+ +++ + W  MI+     G     + ++  M+  G   D  T+  V+  C++   
Sbjct: 69  LFDKLCDRDVISWNSMISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGT 128

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
            + GK +HS AI++     +    +L+DMY+KC   G +D + +VF++M + NV+SWT++
Sbjct: 129 LSLGKAVHSLAIKSSFERRINFSNTLLDMYSKC---GDLDGALRVFEKMGERNVVSWTSM 185

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I GY + G  D  A+ L   M +  V  +     S+L AC      +  + V+ +     
Sbjct: 186 IAGYTRDGWSDG-AIILLQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANN 244

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
            A +  V N+L+ MYA+ G ME A   F ++  K+++S+NTMV     +           
Sbjct: 245 MASNLFVCNALMDMYAKCGSMEGANSVFSTMVVKDIISWNTMVGELKPD----------- 293

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
                     + T A +L   +S+ A+ +G++IH  I+++G+ S+  + NAL+ +Y +C 
Sbjct: 294 ----------SRTMACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCG 343

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            +  A  +F  +  ++++SWT MI G+  HG+   A+  F +M   GI+P+ +++I++L 
Sbjct: 344 VLGLARLLFDMIPSKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILY 403

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSH+GL+ +GW+ F  M ++  I  ++EHYACMVDLL R+G+L++A +FI ++P++ D 
Sbjct: 404 ACSHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDA 463

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
            +W   L  CR++ D EL +  AE + E +P++   ++LL+N+YA A  WE V  +R+++
Sbjct: 464 TIWGALLCGCRIYHDIELAEKVAERVFELEPENTGYYVLLANIYAEAEKWEEVKRMREKI 523

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVG-ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
            ++ L K  GCSWIE   +V+ F  G  +SHP + +I + L ++  K+KE GY P T + 
Sbjct: 524 GKKGLRKNPGCSWIEIKGRVNLFVSGNNSSHPHSKKIESLLKKMRRKMKEEGYFPKTKYA 583

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
           L   +E QK   L  HSEK+A+AFGL++    K IRV KNLRVCGDCH   K++S  T R
Sbjct: 584 LINADEMQKEMALCGHSEKLAMAFGLLTLPPRKTIRVTKNLRVCGDCHEMAKFMSKETRR 643

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           EIVLRDSNRFHH KDG CSC  +W
Sbjct: 644 EIVLRDSNRFHHFKDGYCSCRGFW 667



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 228/477 (47%), Gaps = 50/477 (10%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-------------------RDIVSWSS 150
           + N  + N ++S Y+K GD  E+  +FK M  K                   RD++SW+S
Sbjct: 24  KKNVYLWNFMVSEYAKIGDFKESICLFKIMVEKGIEGKRSESASELFDKLCDRDVISWNS 83

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           MIS YV+ G     + ++ +M+ LG   +     +V+  C+ +  +++G  ++   +K  
Sbjct: 84  MISGYVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSS 143

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
            F+  +     L+DM+ K   DL+ A +VF+KM E+N V WT MI   T+ G    AI L
Sbjct: 144 -FERRINFSNTLLDMYSKCG-DLDGALRVFEKMGERNVVSWTSMIAGYTRDGWSDGAIIL 201

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
              M   G   D   ++ ++ AC+      +GK +H +     +A ++ V  +L+DMYAK
Sbjct: 202 LQQMEKEGVKLDVVAITSILHACARSGSLDNGKDVHDYIKANNMASNLFVCNALMDMYAK 261

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GS++ +  VF  M+  +++SW  ++                      G++ P+  T
Sbjct: 262 C---GSMEGANSVFSTMVVKDIISWNTMV----------------------GELKPDSRT 296

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
            A +L AC +L      ++++ + ++ G + D  V N+L+ +Y + G +  AR  F+ + 
Sbjct: 297 MACILPACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGLARLLFDMIP 356

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            K+LVS+  M+  Y  +    +A    +E+ D G+     +F S+L   S  G + +G +
Sbjct: 357 SKDLVSWTVMIAGYGMHGYGNEAIATFNEMRDAGIEPDEVSFISILYACSHSGLLEQGWR 416

Query: 511 IHARIIKSGF--ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
               I+K+ F  E     Y  ++ + SR  N+  A++  + +    +   W +++ G
Sbjct: 417 FFY-IMKNDFNIEPKLEHYACMVDLLSRTGNLSKAYKFIETLPIAPDATIWGALLCG 472



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 135/505 (26%), Positives = 230/505 (45%), Gaps = 81/505 (16%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G  ++ +     M   G   DL T   +L  C +S    LGK VHSL  +S  E  
Sbjct: 88  YVSNGLTERGLGIYKQMMYLGIDVDLATIISVLVGCAKSGTLSLGKAVHSLAIKSSFERR 147

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               N+L+ +YSKCGDL+ A ++F+ MG +R++VSW+SMI+ Y   G    AI +  +M 
Sbjct: 148 INFSNTLLDMYSKCGDLDGALRVFEKMG-ERNVVSWTSMIAGYTRDGWSDGAIILLQQME 206

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G   +    ++++ AC+ + ++  G  ++ + +K     S++ V  AL+DM+ K GS 
Sbjct: 207 KEGVKLDVVAITSILHACARSGSLDNGKDVHDY-IKANNMASNLFVCNALMDMYAKCGS- 264

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +E A  VF  M  K+ + W  M+                         PD  T++ ++ 
Sbjct: 265 -MEGANSVFSTMVVKDIISWNTMVGE---------------------LKPDSRTMACILP 302

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ L     GK++H + +R G + D  V  +LVD+Y KC V G    +R +FD +   +
Sbjct: 303 ACASLSALERGKEIHGYILRNGYSSDRHVANALVDLYVKCGVLGL---ARLLFDMIPSKD 359

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SWT +I GY    G   EA+  F++M    + P+  +F S+L AC             
Sbjct: 360 LVSWTVMIAGYGMH-GYGNEAIATFNEMRDAGIEPDEVSFISILYAC------------- 405

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAK 466
                                 + SG +E   + F  +      E  L  Y  MVD  ++
Sbjct: 406 ----------------------SHSGLLEQGWRFFYIMKNDFNIEPKLEHYACMVDLLSR 443

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             N  KA++    IE   +   A  + +LL G      I   E++  R+ +   E  +  
Sbjct: 444 TGNLSKAYKF---IETLPIAPDATIWGALLCGCRIYHDIELAEKVAERVFE--LEPENTG 498

Query: 527 YNALISMYSRCANVEAAFQVFKEME 551
           Y  L+      AN+ A  + ++E++
Sbjct: 499 YYVLL------ANIYAEAEKWEEVK 517


>gi|357506719|ref|XP_003623648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498663|gb|AES79866.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 707

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 263/748 (35%), Positives = 422/748 (56%), Gaps = 66/748 (8%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            S IS Y + GD++ A K+F +    +R I SW++M+S+Y    K  DA+ +F +M +  
Sbjct: 23  TSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMPQ-- 80

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
              N   F+ +I        VA    ++  +      + +V    +++  +V+  + +E 
Sbjct: 81  --RNTVSFNGMISGYVKNGMVADARKVFDVMP-----ERNVVSWTSMVRGYVQEGM-VEE 132

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A K+F +M  +N V WT+MI    +     DA +LF DMI      D   ++ ++    +
Sbjct: 133 AEKLFWEMPRRNVVSWTVMIGGLLKESRIDDAKKLF-DMIPE---KDVVVVTNMIGGYCQ 188

Query: 296 LELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           +      ++L     +R     +V    ++V  YAK   +G VD +RK+F+ M + N +S
Sbjct: 189 VGRLDEARELFDEMKVR-----NVFTWTTMVSGYAK---NGRVDVARKLFEVMPERNEVS 240

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA++ GY QSG R KEA +LF  M      P  +  A                      
Sbjct: 241 WTAMLMGYTQSG-RMKEAFELFEAM------PVKWIVAC--------------------- 272

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                       N +I  +  +G M  AR  FE + E++  ++N M+  + +     +A 
Sbjct: 273 ------------NEMILQFGLAGEMHRARMMFEGMKERDEGTWNAMIKVFERKGLDLEAL 320

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L   ++  GV  +  +  S+LS  +S+ ++  G Q+HAR+++S F+ +  + + LI+MY
Sbjct: 321 GLFARMQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMY 380

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C ++  A  +F     ++V+ W SMITG+++HG    AL +F+ M + G++P+ +T+I
Sbjct: 381 VKCGDLVRAKGIFNRFLFKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFI 440

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            VLSACS++G + EG++ F +M   + +   +EHYACMVDLLGR+G + EA+E +  MP+
Sbjct: 441 GVLSACSYSGKVKEGFEIFEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPM 500

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D +VW   LGACR H   +L + A E + + +P++   ++LLS++YA+ G W  V  +
Sbjct: 501 EPDAIVWGALLGACRNHMKLDLAEVAVEKLAKLEPKNAGPYVLLSHMYATKGRWRDVEVL 560

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPD 773
           RK++  R +IK  GCSWIE + KVH F  G++ SHP+   I   L++L+  ++E GY PD
Sbjct: 561 RKKIN-RRVIKFPGCSWIEVEKKVHMFTGGDSKSHPEQHMITQMLEKLSGFLREAGYCPD 619

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +FVLH+++EE+K   L  HSE++AVA+GL+   +  PIRV KNLRVCGDCH+AIK I+ 
Sbjct: 620 GSFVLHDVDEEEKTHSLGYHSERLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSAIKLIAK 679

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VTGREI+LRD+NRFHH KDG CSC D+W
Sbjct: 680 VTGREIILRDANRFHHFKDGSCSCKDFW 707



 Score =  140 bits (353), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/488 (25%), Positives = 220/488 (45%), Gaps = 65/488 (13%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           LL     + N+V  N +IS Y K G + +A K+F  M  +R++VSW+SM+  YV  G   
Sbjct: 73  LLFDQMPQRNTVSFNGMISGYVKNGMVADARKVFDVM-PERNVVSWTSMVRGYVQEGMVE 131

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD--------- 213
           +A  +F EM                       NV    ++ G LLK    D         
Sbjct: 132 EAEKLFWEM--------------------PRRNVVSWTVMIGGLLKESRIDDAKKLFDMI 171

Query: 214 --SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
              DV V   +I  + +    L+ A ++FD+M  +N   WT M++   + G    A +LF
Sbjct: 172 PEKDVVVVTNMIGGYCQVG-RLDEARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLF 230

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFT-SGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
             M      P+R      VS  + L  +T SG+   ++ +   + +   V C+  +M  +
Sbjct: 231 EVM------PER----NEVSWTAMLMGYTQSGRMKEAFELFEAMPVKWIVACN--EMILQ 278

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
             + G +  +R +F+ M + +  +W A+I  + +  G D EA+ LF+ M +  VA N  +
Sbjct: 279 FGLAGEMHRARMMFEGMKERDEGTWNAMIKVF-ERKGLDLEALGLFARMQREGVALNFPS 337

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
             SVL  C +L   +   QV+   V+     D  V + LI+MY + G +  A+  F    
Sbjct: 338 MISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGDLVRAKGIFNRFL 397

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            K++V +N+M+  Y+++   E+A  + H++  +GV     TF  +LS  S  G + +G +
Sbjct: 398 FKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLSACSYSGKVKEGFE 457

Query: 511 IHARIIKSGFESNHCIYNA---------LISMYSRCANVEAAFQVFKEME-DRNVISWTS 560
           I        FE+  C Y           ++ +  R   V+ A ++ ++M  + + I W +
Sbjct: 458 I--------FEAMKCTYQVEPGIEHYACMVDLLGRAGRVDEAMELVEKMPMEPDAIVWGA 509

Query: 561 MITGFAKH 568
           ++     H
Sbjct: 510 LLGACRNH 517



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 57/193 (29%), Positives = 98/193 (50%), Gaps = 7/193 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G   +  +   +L  C    +   G+ VH+ L RS+ + +  + + LI++Y KCGD
Sbjct: 326 MQREGVALNFPSMISVLSVCASLASLDHGRQVHARLVRSEFDQDLYVASVLITMYVKCGD 385

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A  IF     K D+V W+SMI+ Y   G   +A+++F +M   G  P+E  F  V+ 
Sbjct: 386 LVRAKGIFNRFLFK-DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVQPDEVTFIGVLS 444

Query: 189 ACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVK-GSVDLESAYKVFDKM-TE 245
           ACS +  V  G  I+   +KC Y  +  +     ++D+  + G VD   A ++ +KM  E
Sbjct: 445 ACSYSGKVKEGFEIFE-AMKCTYQVEPGIEHYACMVDLLGRAGRVD--EAMELVEKMPME 501

Query: 246 KNTVGWTLMITRC 258
            + + W  ++  C
Sbjct: 502 PDAIVWGALLGAC 514



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 131/321 (40%), Gaps = 71/321 (22%)

Query: 424 CVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           C   S IS Y R G + +ARK F++  L ++ + S+N MV AY ++     A  L  ++ 
Sbjct: 20  CSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQMP 79

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
                                                  + N   +N +IS Y +   V 
Sbjct: 80  ---------------------------------------QRNTVSFNGMISGYVKNGMVA 100

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF  M +RNV+SWTSM+ G+ + G    A ++F++M     + N +++  ++    
Sbjct: 101 DARKVFDVMPERNVVSWTSMVRGYVQEGMVEEAEKLFWEM----PRRNVVSWTVMIGGLL 156

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG---RSGSLTEALEFIRSMPLSADV 658
               I +  K F  M  E  +V        + +++G   + G L EA E    M +  +V
Sbjct: 157 KESRIDDAKKLF-DMIPEKDVV-------VVTNMIGGYCQVGRLDEARELFDEMKVR-NV 207

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
             W T +     +G  ++ +   E++ E++     A ++    Y  +G          RM
Sbjct: 208 FTWTTMVSGYAKNGRVDVARKLFEVMPERNEVSWTAMLM---GYTQSG----------RM 254

Query: 719 KER-NLIKEAGCSWIEADNKV 738
           KE   L +     WI A N++
Sbjct: 255 KEAFELFEAMPVKWIVACNEM 275



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 55/235 (23%), Positives = 100/235 (42%), Gaps = 17/235 (7%)

Query: 494 SLLSGASSIGAIGKGEQIH-ARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQVFKE 549
           SL S  S+I   G+   IH AR +       +     +NA++S Y        A  +F +
Sbjct: 18  SLCSNTSAISRYGRIGDIHNARKVFDNTPLPQRTIASWNAMVSAYFESHKPRDALLLFDQ 77

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  RN +S+  MI+G+ K+G  A A ++F  M     + N +++ +++      G++ E 
Sbjct: 78  MPQRNTVSFNGMISGYVKNGMVADARKVFDVM----PERNVVSWTSMVRGYVQEGMVEEA 133

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
            K F  M   + +      +  M+  L +   + +A +    +P    V+V     G C+
Sbjct: 134 EKLFWEMPRRNVV-----SWTVMIGGLLKESRIDDAKKLFDMIPEKDVVVVTNMIGGYCQ 188

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           V    E    A E+  E   ++      + + YA  G  +    + + M ERN +
Sbjct: 189 VGRLDE----ARELFDEMKVRNVFTWTTMVSGYAKNGRVDVARKLFEVMPERNEV 239


>gi|356577059|ref|XP_003556647.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Glycine max]
          Length = 821

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 255/765 (33%), Positives = 425/765 (55%), Gaps = 8/765 (1%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           K +H+ + ++ +   S +   LI +YS  G L  A  +F         V  ++MI+ ++ 
Sbjct: 64  KSIHAQIIKNWVSTESFLAAKLIRVYSDLGFLGHARNVFDQCSLPETAVC-NAMIAGFLR 122

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
             + ++   +F  M       N Y     ++AC++  +  +G  I    ++ G F   + 
Sbjct: 123 NQQHMEVPRLFRMMGSCDIEINSYTCMFALKACTDLLDDEVGMEIIRAAVRRG-FHLHLY 181

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           VG ++++  VK    L  A KVFD M EK+ V W  +I    Q G   ++I++FL+MI  
Sbjct: 182 VGSSMVNFLVKRGY-LADAQKVFDGMPEKDVVCWNSIIGGYVQKGLFWESIQMFLEMIGG 240

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           G  P   T++ ++ AC +  L   G   HS+ +  G+  DV V  SLVDMY+     G  
Sbjct: 241 GLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGNDVFVLTSLVDMYSNL---GDT 297

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
             +  VFD M   +++SW A+I+GYVQ+G    E+  LF  ++Q     +  T  S+++ 
Sbjct: 298 GSAALVFDSMCSRSLISWNAMISGYVQNG-MIPESYALFRRLVQSGSGFDSGTLVSLIRG 356

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C    D      +++  +++       +  +++ MY++ G ++ A   F  + +KN++++
Sbjct: 357 CSQTSDLENGRILHSCIIRKELESHLVLSTAIVDMYSKCGAIKQATIVFGRMGKKNVITW 416

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+   ++N  +E A +L  ++++  V  ++ T  SL+   + +G++ KG  +HA  I+
Sbjct: 417 TAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIR 476

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFK-EMEDRNVISWTSMITGFAKHGFAARALE 576
            G+  +  I +ALI MY++C  + +A ++F  E   ++VI   SMI G+  HG    AL 
Sbjct: 477 HGYAFDAVITSALIDMYAKCGKIHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALG 536

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           ++ +M+ + +KPN  T++++L+ACSH+GL+ EG   F SM  +H +  + +HYAC+VDL 
Sbjct: 537 VYSRMIEERLKPNQTTFVSLLTACSHSGLVEEGKALFHSMERDHDVRPQHKHYACLVDLH 596

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
            R+G L EA E ++ MP      V    L  CR H +T +G   A+ ++  D  +   ++
Sbjct: 597 SRAGRLEEADELVKQMPFQPSTDVLEALLSGCRTHKNTNMGIQIADRLISLDYLNSGIYV 656

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           +LSN+YA A  WE V  IR  M+ + + K  G S IE  NKV+ F   + SHP   +IY 
Sbjct: 657 MLSNIYAEARKWESVNYIRGLMRMQGMKKIPGYSLIEVGNKVYTFFASDDSHPSWADIYQ 716

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            L+ L L+++  GY+PDT+ VL ++ E  KV+ L+ HSE++A+AFGL+ST     I++ K
Sbjct: 717 LLENLRLEVEAEGYIPDTSCVLRDVNEPMKVKLLWGHSERLAIAFGLLSTPCGSLIKITK 776

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVC DCH   KYIS +  REI++RD+NRFHH  +GKCSCND+W
Sbjct: 777 NLRVCVDCHNVTKYISKIVQREIIVRDANRFHHFVNGKCSCNDFW 821



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/396 (29%), Positives = 206/396 (52%), Gaps = 20/396 (5%)

Query: 57  GRVQKAIFTLDL-----MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           G VQK +F   +     M   G  P   T + LLK+C +S    +G   HS +    +  
Sbjct: 220 GYVQKGLFWESIQMFLEMIGGGLRPSPVTMANLLKACGQSGLKKVGMCAHSYVLALGMGN 279

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +L SL+ +YS  GD   A  +F SM + R ++SW++MIS YV  G   ++  +F  +
Sbjct: 280 DVFVLTSLVDMYSNLGDTGSAALVFDSMCS-RSLISWNAMISGYVQNGMIPESYALFRRL 338

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           ++ G   +     ++IR CS T ++  G I++  +++    +S + +  A++DM+ K   
Sbjct: 339 VQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIR-KELESHLVLSTAIVDMYSKCGA 397

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            ++ A  VF +M +KN + WT M+   +Q G   DA++LF  M       +  TL  +V 
Sbjct: 398 -IKQATIVFGRMGKKNVITWTAMLVGLSQNGYAEDALKLFCQMQEEKVAANSVTLVSLVH 456

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-H 350
            C+ L   T G+ +H+  IR G A D  +  +L+DMYAKC   G +  + K+F+      
Sbjct: 457 CCAHLGSLTKGRTVHAHFIRHGYAFDAVITSALIDMYAKC---GKIHSAEKLFNNEFHLK 513

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ- 409
           +V+   ++I GY    G  + A+ ++S MI+ ++ PN  TF S+L AC +   S + E+ 
Sbjct: 514 DVILCNSMIMGYGMH-GHGRYALGVYSRMIEERLKPNQTTFVSLLTACSH---SGLVEEG 569

Query: 410 -VYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
               H+++R   +     +   L+ +++R+GR+E+A
Sbjct: 570 KALFHSMERDHDVRPQHKHYACLVDLHSRAGRLEEA 605



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/254 (25%), Positives = 130/254 (51%), Gaps = 4/254 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G + ++      + Q G+  D  T   L++ C ++ +   G+++HS + R +LE +
Sbjct: 322 YVQNGMIPESYALFRRLVQSGSGFDSGTLVSLIRGCSQTSDLENGRILHSCIIRKELESH 381

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V+  +++ +YSKCG + +A  +F  MG K+++++W++M+      G   DA+ +F +M 
Sbjct: 382 LVLSTAIVDMYSKCGAIKQATIVFGRMG-KKNVITWTAMLVGLSQNGYAEDALKLFCQMQ 440

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           E     N     +++  C++  ++  G  ++   ++ GY   D  +  ALIDM+ K    
Sbjct: 441 EEKVAANSVTLVSLVHCCAHLGSLTKGRTVHAHFIRHGY-AFDAVITSALIDMYAKCG-K 498

Query: 233 LESAYKVF-DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           + SA K+F ++   K+ +    MI      G  R A+ ++  MI     P++ T   +++
Sbjct: 499 IHSAEKLFNNEFHLKDVILCNSMIMGYGMHGHGRYALGVYSRMIEERLKPNQTTFVSLLT 558

Query: 292 ACSELELFTSGKQL 305
           ACS   L   GK L
Sbjct: 559 ACSHSGLVEEGKAL 572


>gi|86439692|emb|CAJ19324.1| selenium binding protein [Triticum aestivum]
          Length = 624

 Score =  464 bits (1195), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 231/591 (39%), Positives = 360/591 (60%), Gaps = 6/591 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD++ +G L P        ++AC++ +     +++H+    +  A D  +  SL+ MY K
Sbjct: 39  LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C    SV D+R VFD+M   +++SWT++I GY Q+     EA+ L   M++G+  PN FT
Sbjct: 99  CR---SVLDARNVFDQMRRKDMVSWTSLIAGYAQND-MPVEAIGLLPGMLKGRFKPNGFT 154

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FAS+LKA G   DS    Q++  AVK G   D  VG++L+ MYAR G+M+ A   F+ L 
Sbjct: 155 FASLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            KN VS+N ++  +A+  + E A     E+   G   + +T++S+ S  + +GA+ +G+ 
Sbjct: 215 SKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA +IKS  +    + N L+ MY++  ++  A +VF  ++++++++W SM+T FA++G 
Sbjct: 275 VHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQYGL 334

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+  F +M   G+  N IT++ +L+ACSH GL+ EG ++F  M  E+ +   ++HY 
Sbjct: 335 GKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHYV 393

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
            +V LLGR+G L  AL FI  MP+     VW   L ACR+H + ++G+ AA+ + E DP 
Sbjct: 394 TVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPD 453

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D    +LL N+YAS G W+  A +R  MK   + KE  CSW+E +N VH F   + +HP+
Sbjct: 454 DSGPPVLLYNIYASTGQWDAAARVRMMMKTTGVKKEPACSWVEMENSVHMFVANDDTHPQ 513

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             EIY    +++ KI++ GY+PD ++VL  +++++K   L  HSEK+A+AF LI      
Sbjct: 514 AEEIYKMWGEISKKIRKEGYVPDMDYVLLHVDDQEKEANLQYHSEKLALAFALIEMPAGA 573

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IR+ KN+R+CGDCH+A KYIS V GREIV+RD+NRFHH   G CSC DYW
Sbjct: 574 TIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSSGSCSCGDYW 624



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/336 (33%), Positives = 188/336 (55%), Gaps = 9/336 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           LDL+      P    Y   + +C +S+N    + +H+ L  S+   ++ + NSLI +Y K
Sbjct: 39  LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHLGSSRFAGDAFLDNSLIHMYCK 98

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           C  + +A  +F  M  ++D+VSW+S+I+ Y      V+AI +   ML+  F PN + F++
Sbjct: 99  CRSVLDARNVFDQM-RRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFAS 157

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           +++A     +   G  I+   +KCG+ + DV VG AL+DM+ + G +D+ +A  VFDK+ 
Sbjct: 158 LLKAAGAYADSGTGRQIHALAVKCGWHE-DVYVGSALLDMYARCGKMDMATA--VFDKLD 214

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            KN V W  +I+   + G    A+  F +M+ +GF    FT S V S+ + L     GK 
Sbjct: 215 SKNGVSWNALISGFARKGDGESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  I++   L   VG +L+DMYAK    GS+ D+RKVFDR+ + ++++W +++T + Q
Sbjct: 275 VHAHVIKSRQKLTAFVGNTLLDMYAK---SGSMIDARKVFDRVDNKDLVTWNSMLTAFAQ 331

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             G  KEAV  F +M +  V  N  TF  +L AC +
Sbjct: 332 Y-GLGKEAVSHFEEMRKSGVYLNQITFLCILTACSH 366



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 207/402 (51%), Gaps = 8/402 (1%)

Query: 169 VEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           +++L+ G   P    + + I AC+ ++N+     I+  L     F  D  +  +LI M+ 
Sbjct: 39  LDLLDAGELAPTPRVYRSFITACAQSKNLEDARKIHAHL-GSSRFAGDAFLDNSLIHMYC 97

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K    L+ A  VFD+M  K+ V WT +I    Q   P +AI L   M+   F P+ FT +
Sbjct: 98  KCRSVLD-ARNVFDQMRRKDMVSWTSLIAGYAQNDMPVEAIGLLPGMLKGRFKPNGFTFA 156

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            ++ A        +G+Q+H+ A++ G   DV VG +L+DMYA+C   G +D +  VFD++
Sbjct: 157 SLLKAAGAYADSGTGRQIHALAVKCGWHEDVYVGSALLDMYARC---GKMDMATAVFDKL 213

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              N +SW A+I+G+ + G   + A+  F++M++      HFT++SV  +   L      
Sbjct: 214 DSKNGVSWNALISGFARKGD-GESALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQG 272

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           + V+ H +K  + L   VGN+L+ MYA+SG M DARK F+ +  K+LV++N+M+ A+A+ 
Sbjct: 273 KWVHAHVIKSRQKLTAFVGNTLLDMYAKSGSMIDARKVFDRVDNKDLVTWNSMLTAFAQY 332

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              ++A     E+  +GV  +  TF  +L+  S  G + +G++    + +   E     Y
Sbjct: 333 GLGKEAVSHFEEMRKSGVYLNQITFLCILTACSHGGLVKEGKRYFEMMKEYDLEPEIDHY 392

Query: 528 NALISMYSRCANVEAAFQ-VFKEMEDRNVISWTSMITGFAKH 568
             ++++  R   +  A   +FK   +     W +++     H
Sbjct: 393 VTVVALLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 71/253 (28%), Positives = 128/253 (50%), Gaps = 4/253 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y  ND  V+ AI  L  M +    P+  T++ LLK+     +   G+ +H+L  +     
Sbjct: 127 YAQNDMPVE-AIGLLPGMLKGRFKPNGFTFASLLKAAGAYADSGTGRQIHALAVKCGWHE 185

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  + ++L+ +Y++CG ++ A  +F  + +K   VSW+++IS +  +G    A+  F EM
Sbjct: 186 DVYVGSALLDMYARCGKMDMATAVFDKLDSKNG-VSWNALISGFARKGDGESALMTFAEM 244

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           L  GF    + +S+V  + +    +  G  ++  ++K         VG  L+DM+ K S 
Sbjct: 245 LRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHVIKSRQ-KLTAFVGNTLLDMYAK-SG 302

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +  A KVFD++  K+ V W  M+T   Q G  ++A+  F +M  SG   ++ T   +++
Sbjct: 303 SMIDARKVFDRVDNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGVYLNQITFLCILT 362

Query: 292 ACSELELFTSGKQ 304
           ACS   L   GK+
Sbjct: 363 ACSHGGLVKEGKR 375


>gi|347954520|gb|AEP33760.1| organelle transcript processing 82, partial [Capsella
           bursa-pastoris]
          Length = 706

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 256/691 (37%), Positives = 397/691 (57%), Gaps = 38/691 (5%)

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCT 259
           II+  ++K G  +++  +   +    +    D L  A  VFD + E N + W  M     
Sbjct: 20  IIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLTYAISVFDSIQEPNLLIWNTMFRGHA 79

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
               P  A+ L++ MI  G +P+ +T   ++ AC++ + F  G+Q+H   ++ G  LD+ 
Sbjct: 80  LSSDPVSALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLY 139

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFD---------------------------RMLDH-- 350
           V  SL+ MY K   +G  +D+RKVFD                           +M D   
Sbjct: 140 VHTSLIAMYVK---NGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIP 196

Query: 351 --NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +V+SW A+I+GY ++G   KEA++LF +M++  V P+  T  +VL AC       +  
Sbjct: 197 VKDVVSWNALISGYAETGNY-KEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGR 255

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           QV++     G   +  + N+LI +Y + G +E A   FE L  K+++S+NT++  Y    
Sbjct: 256 QVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKDVISWNTLIGGYTHMN 315

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK--SGFESNHCI 526
             ++A  L  E+  +G   +  T  S+L   + +GAI  G  IH  I K   G  +   +
Sbjct: 316 LYKEALLLFQEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSL 375

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             +LI MY++C ++EAA QVF  M +R++ SW +MI GFA HG A  A +IF +M  DGI
Sbjct: 376 RTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGI 435

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ IT++ +LSACSH+G++  G   FRSM +++ I  ++EHY CM+DLLG SG   EA 
Sbjct: 436 EPDDITFVGLLSACSHSGMLDLGRHIFRSMTEDYKITPKLEHYGCMIDLLGHSGLFKEAE 495

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           E I SM +  D ++W + L AC++HG+ ELG+  A+ +++ +P++  +++LLSN+YA+AG
Sbjct: 496 EMINSMEMDPDGVIWCSLLKACKMHGNVELGESFAQNLIKIEPKNSGSYVLLSNIYATAG 555

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W  VA  R  + ++ + K  GCS IE D+ VH+F +G+  HP+  EIY  L+++ + ++
Sbjct: 556 RWNEVAKRRALLNDKGMKKVPGCSSIEIDSVVHEFIIGDKLHPRNREIYGMLEEMEVLLE 615

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E G++PDT+ VL E+EEE K   L  HSEK+A+AFGLIST     + + KNLRVC +CH 
Sbjct: 616 EAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIAFGLISTKPGTKLTIVKNLRVCRNCHE 675

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A K IS +  REI+ RD  RFHH  DG CSC
Sbjct: 676 ATKLISKIYKREIIARDRTRFHHFXDGVCSC 706



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/587 (25%), Positives = 281/587 (47%), Gaps = 54/587 (9%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS---LYSKCGDLN 130
           NHP L     LL +C   +     +++H+ + ++ L   +  L+ LI    L      L 
Sbjct: 2   NHPSLS----LLHNC---KTLQSLRIIHAKMIKTGLHNTNYALSKLIEFSVLSPHFDGLT 54

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
            A  +F S+  + +++ W++M   +      V A++++V M+ LG  PN Y F  +++AC
Sbjct: 55  YAISVFDSI-QEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLGLVPNSYTFPFLLKAC 113

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD------------------ 232
           + ++    G  I+G +LK G  D D+ V  +LI M+VK                      
Sbjct: 114 AKSKAFREGQQIHGHVLKLG-CDLDLYVHTSLIAMYVKNGRXEDARKVFDQSSHRDVVSY 172

Query: 233 ------------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
                       + SA K+FD++  K+ V W  +I+   + G  ++A+ LF +M+ +   
Sbjct: 173 TALIKGYASNGYIXSAQKMFDEIPVKDVVSWNALISGYAETGNYKEALELFKEMMKTNVK 232

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD  T+  V+SAC++      G+Q+HSW    G   ++ +  +L+D+Y KC   G V+ +
Sbjct: 233 PDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKC---GEVETA 289

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             +F+ +   +V+SW  +I GY       KEA+ LF +M++   +PN  T  S+L AC +
Sbjct: 290 SGLFEGLSYKDVISWNTLIGGYTHM-NLYKEALLLFQEMLRSGESPNEVTMLSILPACAH 348

Query: 401 LLDSNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
           L   ++   ++ +  KR + + +   +  SLI MYA+ G +E A++ F+S+  ++L S+N
Sbjct: 349 LGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDSMLNRSLSSWN 408

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  +A +  +  AF++   +   G+     TF  LLS  S  G +  G  I  R +  
Sbjct: 409 AMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSHSGMLDLGRHIF-RSMTE 467

Query: 519 GFESNHCI--YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARAL 575
            ++    +  Y  +I +       + A ++   ME D + + W S++     HG      
Sbjct: 468 DYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSMEMDPDGVIWCSLLKACKMHGNVELG- 526

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           E F + L      N  +Y+ + +  + AG  +E  K  R++ ++ G+
Sbjct: 527 ESFAQNLIKIEPKNSGSYVLLSNIYATAGRWNEVAKR-RALLNDKGM 572



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/493 (24%), Positives = 228/493 (46%), Gaps = 81/493 (16%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A++    M   G  P+  T+  LLK+C +S+ F  G+ +H  + +   + +  +  SLI+
Sbjct: 87  ALYLYVCMISLGLVPNSYTFPFLLKACAKSKAFREGQQIHGHVLKLGCDLDLYVHTSLIA 146

Query: 122 LYSKCGDLNEANKIFKSMGNK------------------------------RDIVSWSSM 151
           +Y K G   +A K+F    ++                              +D+VSW+++
Sbjct: 147 MYVKNGRXEDARKVFDQSSHRDVVSYTALIKGYASNGYIXSAQKMFDEIPVKDVVSWNAL 206

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           IS Y   G   +A+ +F EM++    P+E     V+ AC+ + ++ +G  ++ ++   G 
Sbjct: 207 ISGYAETGNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHG- 265

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F S++ +  ALID+++K   ++E+A  +F+ ++ K+ + W  +I   T +   ++A+ LF
Sbjct: 266 FGSNLKIVNALIDLYIKCG-EVETASGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLF 324

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYA 329
            +M+ SG  P+  T+  ++ AC+ L     G+ +H +  +   G++    +  SL+DMYA
Sbjct: 325 QEMLRSGESPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYA 384

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           KC   G ++ +++VFD ML+ ++ SW A+I G+    GR   A  +FS M +  + P+  
Sbjct: 385 KC---GDIEAAQQVFDSMLNRSLSSWNAMIFGFAMH-GRANPAFDIFSRMRKDGIEPDDI 440

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           TF  +L AC                                   + SG ++  R  F S+
Sbjct: 441 TFVGLLSAC-----------------------------------SHSGMLDLGRHIFRSM 465

Query: 450 FEK-----NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            E       L  Y  M+D    +   ++A E+++ +E   +      + SLL      G 
Sbjct: 466 TEDYKITPKLEHYGCMIDLLGHSGLFKEAEEMINSME---MDPDGVIWCSLLKACKMHGN 522

Query: 505 IGKGEQIHARIIK 517
           +  GE     +IK
Sbjct: 523 VELGESFAQNLIK 535



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 76/250 (30%), Positives = 127/250 (50%), Gaps = 3/250 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M +    PD  T   +L +C +S +  LG+ VHS +       N  I+
Sbjct: 214 GNYKEALELFKEMMKTNVKPDESTMVTVLSACAQSASIELGRQVHSWIDDHGFGSNLKIV 273

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LY KCG++  A+ +F+ +  K D++SW+++I  Y +     +A+ +F EML  G 
Sbjct: 274 NALIDLYIKCGEVETASGLFEGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 332

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLES 235
            PNE    +++ AC++   + IG  I+ ++ K      +   +  +LIDM+ K   D+E+
Sbjct: 333 SPNEVTMLSILPACAHLGAIDIGRWIHVYIDKRLKGVSNPSSLRTSLIDMYAKCG-DIEA 391

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD M  ++   W  MI      G    A  +F  M   G  PD  T  G++SACS 
Sbjct: 392 AQQVFDSMLNRSLSSWNAMIFGFAMHGRANPAFDIFSRMRKDGIEPDDITFVGLLSACSH 451

Query: 296 LELFTSGKQL 305
             +   G+ +
Sbjct: 452 SGMLDLGRHI 461


>gi|302822426|ref|XP_002992871.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
 gi|300139319|gb|EFJ06062.1| hypothetical protein SELMODRAFT_136134 [Selaginella moellendorffii]
          Length = 716

 Score =  464 bits (1194), Expect = e-128,   Method: Compositional matrix adjust.
 Identities = 253/727 (34%), Positives = 428/727 (58%), Gaps = 27/727 (3%)

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           MI++ V  G+ + A+ ++ EM E G   +++  ++++ AC+  + +  G  ++  L+  G
Sbjct: 1   MIAACVREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG 60

Query: 211 YFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
            F +D+ +  AL+ M+ K GS+D   A +VF+ M  K+   W+ +I    + G    A+ 
Sbjct: 61  -FRTDIPLETALLQMYAKCGSLD--DAKRVFEGMEIKDLFAWSSIIAAYARAGRGEMAVV 117

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
           L+  MI  G  P+  T +  +  C+ +     G+ +H   + + +  D  +  SL++MY 
Sbjct: 118 LYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYL 177

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNH 388
           KC     + ++RKVF+ M   NV S+TA+I+ YVQ+G    EA++LFS M + + + PN 
Sbjct: 178 KCD---EMVEARKVFEGMKARNVRSYTAMISAYVQAG-EHAEALELFSRMSKVEAIEPNA 233

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           +TFA++L A   L +     +V+ H   RG   +  V N+L++MY + G   +ARK F+S
Sbjct: 234 YTFATILGAVEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDS 293

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           +  +N++S+ +M+ AYA++ N ++A  L   ++   V  S  +F+S L+  + +GA+ +G
Sbjct: 294 MTARNVISWTSMIAAYAQHGNPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEG 350

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
            +IH R++++   S   +  +L+SMY+RC +++ A +VF  M+ R+  S  +MI  F +H
Sbjct: 351 REIHHRVVEANLASPQ-METSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQH 409

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G   +AL I+ KM  +GI  +GIT+++VL ACSH  L+++     +S+  +HG+V  +EH
Sbjct: 410 GRKKQALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEH 469

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y CMVD+LGRSG L +A E + +MP  AD + W T L  C+ HGD + G+ AA  + E  
Sbjct: 470 YLCMVDVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHGDLDRGERAARKVFELA 529

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG---- 744
           P +   ++ LSN+YA+A  ++    +RK M+ER + +    S+IE DN++H F  G    
Sbjct: 530 PAETLPYVFLSNMYAAAKRFDDARRVRKEMEERGVTRPVAVSYIEIDNELHMFTSGGRDE 589

Query: 745 --ETSHPKTLE-IYAELDQLALKIKEFGYLPDTNFVLHELE----EEQKVQYLFQHSEKI 797
             E    +T+E + + L +L   +K+ GY+PDT  V  E +    EE+K + L  HSE++
Sbjct: 590 QQEGHDGRTMERVRSLLVELLEPMKQAGYVPDTREVYLEQQGVTSEEEKQRSLCFHSERL 649

Query: 798 AVAFGLISTS---KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           A+A+GLI+      S+P+RV  + RVC  CH+AIK +S +T + I +RD +RFHH + G 
Sbjct: 650 AIAYGLIAAKDPDDSRPLRVVNSHRVCSGCHSAIKLLSDITEKRIFVRDGSRFHHFEKGA 709

Query: 855 CSCNDYW 861
           CSC D+W
Sbjct: 710 CSCGDHW 716



 Score =  209 bits (532), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/519 (26%), Positives = 259/519 (49%), Gaps = 14/519 (2%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR  +A+     M ++G   D    + L+ +C + +    G+ +H  L  +    + 
Sbjct: 6   VREGRPLQALELWGEMEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDI 65

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  +L+ +Y+KCG L++A ++F+ M  K D+ +WSS+I++Y   G+   A+ ++  M+ 
Sbjct: 66  PLETALLQMYAKCGSLDDAKRVFEGMEIK-DLFAWSSIIAAYARAGRGEMAVVLYRRMIA 124

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PN   F+  +  C++   +A G  I+  +L       DV +  +L++M++K   ++
Sbjct: 125 EGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDV-LQDSLLNMYLKCD-EM 182

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSA 292
             A KVF+ M  +N   +T MI+   Q G   +A+ LF  M  +    P+ +T + ++ A
Sbjct: 183 VEARKVFEGMKARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGA 242

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
              L     G+++H      G   +V V  +LV MY KC   GS  ++RKVFD M   NV
Sbjct: 243 VEGLGNLEKGRKVHRHLASRGFDTNVVVQNALVTMYGKC---GSPVEARKVFDSMTARNV 299

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT++I  Y Q G   +EA+ LF  M    V P+  +F+S L AC  L   +   +++ 
Sbjct: 300 ISWTSMIAAYAQHGN-PQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIH- 354

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H V         +  SL+SMYAR G ++DAR+ F  +  ++  S N M+ A+ ++   ++
Sbjct: 355 HRVVEANLASPQMETSLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQ 414

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALI 531
           A  +  ++E  G+     TF S+L   S    +      + + ++  G       Y  ++
Sbjct: 415 ALRIYRKMEQEGIPADGITFVSVLVACSHTSLVADCRDFLQSLVMDHGVVPLVEHYLCMV 474

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
            +  R   +  A ++ + M    + ++W ++++G  +HG
Sbjct: 475 DVLGRSGRLGDAEELVETMPYQADAVAWMTLLSGCKRHG 513



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 150/505 (29%), Positives = 245/505 (48%), Gaps = 56/505 (11%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR + A+     M  +G  P++ T++  L  C        G+ +H  +  SK+  + V+ 
Sbjct: 110 GRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQ 169

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-G 175
           +SL+++Y KC ++ EA K+F+ M   R++ S+++MIS+YV  G+  +A+ +F  M ++  
Sbjct: 170 DSLLNMYLKCDEMVEARKVFEGM-KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEA 228

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             PN Y F+ ++ A     N+  G  ++  L   G FD++V V  AL+ M+ K    +E 
Sbjct: 229 IEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRG-FDTNVVVQNALVTMYGKCGSPVE- 286

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A KVFD MT +N + WT MI    Q G P++A+ LF  M +    P   + S  ++AC+ 
Sbjct: 287 ARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVE---PSGVSFSSALNACAL 343

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     G+++H   +   LA    +  SL+ MYA+C   GS+DD+R+VF+RM   +  S 
Sbjct: 344 LGALDEGREIHHRVVEANLA-SPQMETSLLSMYARC---GSLDDARRVFNRMKTRDAFSC 399

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I  + Q  GR K+A++++  M Q  +  +  TF SVL AC +               
Sbjct: 400 NAMIAAFTQH-GRKKQALRIYRKMEQEGIPADGITFVSVLVACSH--------------- 443

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV-----SYNTMVDAYAKNLNS 470
                       SL++         D R   +SL   + V      Y  MVD   ++   
Sbjct: 444 -----------TSLVA---------DCRDFLQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 483

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
             A EL   +E       A  + +LLSG    G + +GE+  AR +     +    Y  L
Sbjct: 484 GDAEEL---VETMPYQADAVAWMTLLSGCKRHGDLDRGERA-ARKVFELAPAETLPYVFL 539

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNV 555
            +MY+     + A +V KEME+R V
Sbjct: 540 SNMYAAAKRFDDARRVRKEMEERGV 564


>gi|297810463|ref|XP_002873115.1| EMB175 [Arabidopsis lyrata subsp. lyrata]
 gi|297318952|gb|EFH49374.1| EMB175 [Arabidopsis lyrata subsp. lyrata]
          Length = 896

 Score =  464 bits (1194), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 274/822 (33%), Positives = 455/822 (55%), Gaps = 43/822 (5%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +D +  LL+   +  +  + K VH+   + + E  + + N+LIS Y K G   EA  +F 
Sbjct: 80  VDGFFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAFLVFV 138

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENV 196
           S+ +   +VS++++IS +     +++A+ +F  M + G   PNEY F A++ AC      
Sbjct: 139 SLSSP-TVVSYTALISGFSRLNLEIEALKVFFRMRKAGIVQPNEYTFVAILTACVRVSRF 197

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS-VDLESAYKVFDKMTEKNTVGWTLMI 255
           ++G  I+G ++K G+ +S V VG +L+ ++ K S    +   K+FD++  ++   W  +I
Sbjct: 198 SLGIQIHGLIVKSGFLNS-VFVGNSLMSLYSKDSGSSCDDVLKLFDEIPHRDVASWNTVI 256

Query: 256 TRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +   + G    A  LF +M  + G   D FTLS ++S+C++      G++LH  AIR GL
Sbjct: 257 SSLVKEGKSHKAFNLFYEMNRVEGLGVDCFTLSTLLSSCTDSSDLLRGRELHGRAIRIGL 316

Query: 315 ALDVCVGCSLVDMYAKC----------------------------TVDGSVDDSRKVFDR 346
             ++ V  +L+  Y+K                                G VD + ++F+ 
Sbjct: 317 MQELSVNNALIGFYSKFGDMKKVESLYEMMMVQDAVTFTEMITAYMAFGMVDSAVEIFEN 376

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           + + N +++ A++ G+ ++G   K A+KLF++M+Q  V    F+  S + ACG + +  V
Sbjct: 377 ITEKNTITYNALMAGFCRNGHGLK-ALKLFTEMLQRGVELTDFSLTSAVDACGLVSEKRV 435

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL---VSYNTMVDA 463
           +EQ++   +K G  L+ C+  +L+ M  R  RM DA + FE  +  NL    +  +++  
Sbjct: 436 SEQIHGFCIKFGCLLNPCIQTALLDMCTRCERMADAEEMFEQ-WPSNLDRSKATTSILGG 494

Query: 464 YAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
           YA+N   +KA  L H  + +  +     +   +L+   ++G    G QIH   +K+G+ S
Sbjct: 495 YARNGLPDKALSLFHRTLCEEELFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFS 554

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           + C+ N+LISMYS+C + + A +VF  M++ +V+SW S+I+ +        AL ++ +M 
Sbjct: 555 DVCLGNSLISMYSKCCDSDDAIKVFNTMQEHDVVSWNSLISCYILQRNGNEALALWSRMN 614

Query: 583 ADGIKPNGITYIAVLSAC--SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
            + IKP+ IT   V+SA   + +  +S     F SM   + I    EHY   V +LG  G
Sbjct: 615 EEEIKPDMITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWG 674

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            L EA + I SMP   +V V R  L +CRVH +T + K  A+++L   P++P+ +IL SN
Sbjct: 675 LLEEAEDTINSMPFQPEVSVLRALLDSCRVHSNTSVAKRVAKLVLSTKPENPSEYILKSN 734

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +Y+++G W     IR+ M+ER   K    SWI  + KVH FH  +TSHP+  +IY+ L+ 
Sbjct: 735 IYSASGLWHRSEMIREEMRERGYRKHPSKSWIIHEKKVHSFHARDTSHPQEKDIYSGLEI 794

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI-STSKSKPIRVFKNLR 819
           L ++  + GY P+T FVL E++E  K  +LF HS K+AV +G++ S ++ KP+RV KN+ 
Sbjct: 795 LIMECLKSGYEPNTEFVLQEVDEFMKKSFLFHHSAKLAVTYGILTSNTRGKPVRVVKNVM 854

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCH   KY+S+V  REIVLRDS+ FHH  +GKCSC D W
Sbjct: 855 LCGDCHEFFKYVSVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896



 Score =  171 bits (433), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/459 (25%), Positives = 224/459 (48%), Gaps = 40/459 (8%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK--CGDLNEA 132
            P+  T+  +L +C+R   F LG  +H L+ +S    +  + NSL+SLYSK      ++ 
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVGNSLMSLYSKDSGSSCDDV 237

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACS 191
            K+F  + + RD+ SW+++ISS V  GK   A ++F EM  + G   + +  S ++ +C+
Sbjct: 238 LKLFDEIPH-RDVASWNTVISSLVKEGKSHKAFNLFYEMNRVEGLGVDCFTLSTLLSSCT 296

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK----------------------- 228
           ++ ++  G  ++G  ++ G    ++ V  ALI  + K                       
Sbjct: 297 DSSDLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFGDMKKVESLYEMMMVQDAVTFT 355

Query: 229 ---------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
                    G VD  SA ++F+ +TEKNT+ +  ++    + G    A++LF +M+  G 
Sbjct: 356 EMITAYMAFGMVD--SAVEIFENITEKNTITYNALMAGFCRNGHGLKALKLFTEMLQRGV 413

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
               F+L+  V AC  +      +Q+H + I+ G  L+ C+  +L+DM  +C      ++
Sbjct: 414 ELTDFSLTSAVDACGLVSEKRVSEQIHGFCIKFGCLLNPCIQTALLDMCTRCERMADAEE 473

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
             + +   LD +  + T+I+ GY ++G  DK        + + ++  +  +   +L  CG
Sbjct: 474 MFEQWPSNLDRSKAT-TSILGGYARNGLPDKALSLFHRTLCEEELFLDEVSLTLILAVCG 532

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L    +  Q++ +A+K G   D C+GNSLISMY++    +DA K F ++ E ++VS+N+
Sbjct: 533 TLGFREMGYQIHCYALKAGYFSDVCLGNSLISMYSKCCDSDDAIKVFNTMQEHDVVSWNS 592

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           ++  Y    N  +A  L   + +  +     T   ++S 
Sbjct: 593 LISCYILQRNGNEALALWSRMNEEEIKPDMITLTLVISA 631


>gi|449438685|ref|XP_004137118.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
 gi|449528041|ref|XP_004171015.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g02330-like [Cucumis sativus]
          Length = 868

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 257/755 (34%), Positives = 429/755 (56%), Gaps = 9/755 (1%)

Query: 36  FIAQPTTSEPLS-NRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
           F + P   + +S N LI  +L +G +QK+I     M   G   D  T ++ LK C    +
Sbjct: 113 FNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVFLKMRDLGVMFDHTTLAVSLKICSLLED 172

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
             LG  +H +  +   + + V  ++L+ +Y+KC  L ++  +F  + +K + +SWS+ I+
Sbjct: 173 QVLGIQIHGIAVQMGFDYDVVTGSALVDMYAKCNSLEDSLDVFSELPDK-NWISWSAAIA 231

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
             V   + +  + +F EM   G   ++  +++V R+C+      +G  ++   LK   F 
Sbjct: 232 GCVQNDQLLRGLKLFKEMQRKGIGVSQSTYASVFRSCAGLSASRLGTQLHCHALKTD-FG 290

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           SDV VG A +DM+ K   ++  AYK+F  + + N   +  MI    +      A +LFL 
Sbjct: 291 SDVIVGTATLDMYAKCD-NMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQ 349

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           +  + F  D  +LSG +SA + ++  + G QLH  AI++ L+ ++CV  +++DMY KC  
Sbjct: 350 LQKNSFSFDEVSLSGALSAAAVIKGHSEGLQLHGLAIKSNLSSNICVANAILDMYGKC-- 407

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G++ ++  +FD M   + +SW AIIT   Q+    K  +  F  M++ ++ P+ FT+ S
Sbjct: 408 -GALVEASGLFDEMEIRDPVSWNAIITACEQNESEGK-TLSHFGAMLRSKMEPDEFTYGS 465

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           VLKAC      +   +V+   +K G  L   VG++L+ MY++ G ME+A K    L E+ 
Sbjct: 466 VLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGSALVDMYSKCGMMEEAEKIHYRLEEQT 525

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +VS+N ++  ++    SE +      + + GV    +T+A++L   +++  +G G+QIHA
Sbjct: 526 MVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEPDNFTYATVLDTCANLATVGLGKQIHA 585

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
           ++IK    S+  I + L+ MYS+C N+  +  +F++   R+ ++W +MI GFA HG    
Sbjct: 586 QMIKLELLSDVYITSTLVDMYSKCGNMHDSLLMFRKAPKRDSVTWNAMICGFAYHGLGEE 645

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           ALE+F  ML + IKPN  T+++VL ACSH G   +G  +F+ M   + +  ++EHY+CMV
Sbjct: 646 ALELFEHMLHENIKPNHATFVSVLRACSHVGNAKKGLFYFQKMASIYALEPQLEHYSCMV 705

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA 693
           D+LGRSG + EAL  I+ MP  AD ++WRT L  C++ G+ E+ + AA  +L+ DP+D +
Sbjct: 706 DILGRSGQVEEALRLIQDMPFEADAIIWRTLLSICKIQGNVEVAEKAASSLLKLDPEDSS 765

Query: 694 AHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLE 753
           A+ LLSN+YA AG W+ V+ IR+ M+  NL KE GCSWIE  ++VH F V + +HPK   
Sbjct: 766 AYTLLSNIYADAGMWQQVSKIRQTMRSHNLKKEPGCSWIEVKDEVHTFLVCDKAHPKCEM 825

Query: 754 IYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
           IY+ LD L   ++  G  P+ + +  E  EE + Q
Sbjct: 826 IYSLLDLLICDMRRSGCAPEIDTIQVEEVEENRHQ 860



 Score =  268 bits (686), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 171/635 (26%), Positives = 309/635 (48%), Gaps = 42/635 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC------------- 126
           T+S + + C   R    GK  H+ +  S   P   + N LI +Y KC             
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 127 ------------------GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
                             G +  A  +F SM +  D+VSW+S+IS Y+  G    +I +F
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAVF 145

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           ++M +LG   +    +  ++ CS  E+  +G  I+G  ++ G FD DV  G AL+DM+ K
Sbjct: 146 LKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMG-FDYDVVTGSALVDMYAK 204

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            +  LE +  VF ++ +KN + W+  I  C Q       ++LF +M   G    + T + 
Sbjct: 205 CN-SLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYAS 263

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V  +C+ L     G QLH  A++T    DV VG + +DMYAKC    ++ D+ K+F  + 
Sbjct: 264 VFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCD---NMSDAYKLFSLLP 320

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           DHN+ S+ A+I GY ++  +  +A KLF  + +   + +  + +  L A   +   +   
Sbjct: 321 DHNLQSYNAMIIGYARN-EQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGL 379

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++  A+K   + + CV N+++ MY + G + +A   F+ +  ++ VS+N ++ A  +N 
Sbjct: 380 QLHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNE 439

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           +  K       +  + +    +T+ S+L   +   A   G ++H RIIKSG      + +
Sbjct: 440 SEGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGLKMFVGS 499

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ MYS+C  +E A ++   +E++ ++SW ++I+GF+    +  +   F  ML  G++P
Sbjct: 500 ALVDMYSKCGMMEEAEKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGVEP 559

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           +  TY  VL  C++   +  G K   +   +  ++  +   + +VD+  + G++ ++L  
Sbjct: 560 DNFTYATVLDTCANLATVGLG-KQIHAQMIKLELLSDVYITSTLVDMYSKCGNMHDSLLM 618

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            R  P   D + W   +     HG   LG+ A E+
Sbjct: 619 FRKAP-KRDSVTWNAMICGFAYHG---LGEEALEL 649



 Score =  238 bits (606), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 167/543 (30%), Positives = 261/543 (48%), Gaps = 46/543 (8%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           FS + + CSN   +  G   +  ++  G+  +     C LI M+VK    LE AYKVF++
Sbjct: 27  FSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNC-LIQMYVK-CCALEYAYKVFEE 84

Query: 243 MTEKNTVGWTLMITRCT--------------------------------QLGCPRDAIRL 270
           M +++ V W  M+  C                                 Q G  + +I +
Sbjct: 85  MPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQKSIAV 144

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           FL M   G + D  TL+  +  CS LE    G Q+H  A++ G   DV  G +LVDMYAK
Sbjct: 145 FLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMYAK 204

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C    S++DS  VF  + D N +SW+A I G VQ+  +    +KLF +M +  +  +  T
Sbjct: 205 CN---SLEDSLDVFSELPDKNWISWSAAIAGCVQN-DQLLRGLKLFKEMQRKGIGVSQST 260

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           +ASV ++C  L  S +  Q++ HA+K     D  VG + + MYA+   M DA K F  L 
Sbjct: 261 YASVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLP 320

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           + NL SYN M+  YA+N    +AF+L  +++         + +  LS A+ I    +G Q
Sbjct: 321 DHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ 380

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H   IKS   SN C+ NA++ MY +C  +  A  +F EME R+ +SW ++IT   ++  
Sbjct: 381 LHGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIRDPVSWNAIITACEQNES 440

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHY 629
             + L  F  ML   ++P+  TY +VL AC+     S G + H R +    G+  +M   
Sbjct: 441 EGKTLSHFGAMLRSKMEPDEFTYGSVLKACAGQRAFSNGMEVHGRIIKSGMGL--KMFVG 498

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK----HAAEMIL 685
           + +VD+  + G + EA E I        ++ W   +    +   +E  +    H  EM +
Sbjct: 499 SALVDMYSKCGMMEEA-EKIHYRLEEQTMVSWNAIISGFSLQKKSEDSQRFFSHMLEMGV 557

Query: 686 EQD 688
           E D
Sbjct: 558 EPD 560



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 196/416 (47%), Gaps = 32/416 (7%)

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV--------- 333
           R T S +   CS       GK+ H+  I +G    V V   L+ MY KC           
Sbjct: 24  RKTFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFE 83

Query: 334 -------------------DGSVDDSRKVFDRMLDH-NVMSWTAIITGYVQSGGRDKEAV 373
                               G ++ ++ VF+ M  H +V+SW ++I+GY+Q+G   K ++
Sbjct: 84  EMPQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHGDVVSWNSLISGYLQNGDIQK-SI 142

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            +F  M    V  +H T A  LK C  L D  +  Q++  AV+ G   D   G++L+ MY
Sbjct: 143 AVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMY 202

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+   +ED+   F  L +KN +S++  +    +N    +  +L  E++  G+G S  T+A
Sbjct: 203 AKCNSLEDSLDVFSELPDKNWISWSAAIAGCVQNDQLLRGLKLFKEMQRKGIGVSQSTYA 262

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+    + + A   G Q+H   +K+ F S+  +  A + MY++C N+  A+++F  + D 
Sbjct: 263 SVFRSCAGLSASRLGTQLHCHALKTDFGSDVIVGTATLDMYAKCDNMSDAYKLFSLLPDH 322

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           N+ S+ +MI G+A++    +A ++F ++  +    + ++    LSA +     SEG +  
Sbjct: 323 NLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLSGALSAAAVIKGHSEGLQ-L 381

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
             +  +  +   +     ++D+ G+ G+L EA      M +  D + W   + AC 
Sbjct: 382 HGLAIKSNLSSNICVANAILDMYGKCGALVEASGLFDEMEIR-DPVSWNAIITACE 436



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 86/359 (23%), Positives = 144/359 (40%), Gaps = 63/359 (17%)

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           TF+ +    S+  A+  G++ HA +I SGF     + N LI MY +C  +E A++VF+EM
Sbjct: 26  TFSHIFQECSNRRALKPGKEAHAHMILSGFTPTVFVTNCLIQMYVKCCALEYAYKVFEEM 85

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
             R+++SW +M+ G A  G    A  +F  M   G   + +++ +++S     G I +  
Sbjct: 86  PQRDIVSWNTMVFGCAGAGRMELAQAVFNSMPHHG---DVVSWNSLISGYLQNGDIQKSI 142

Query: 611 KHFRSMYDE----------------------------HGIVQRMEH------YACMVDLL 636
             F  M D                             HGI  +M         + +VD+ 
Sbjct: 143 AVFLKMRDLGVMFDHTTLAVSLKICSLLEDQVLGIQIHGIAVQMGFDYDVVTGSALVDMY 202

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
            +  SL ++L+    +P   + + W   +  C V  D  L      + L ++ Q     +
Sbjct: 203 AKCNSLEDSLDVFSELP-DKNWISWSAAIAGC-VQNDQLL----RGLKLFKEMQRKGIGV 256

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
             S  YAS      V      +    L  +  C  ++ D     F         TL++YA
Sbjct: 257 SQST-YAS------VFRSCAGLSASRLGTQLHCHALKTD-----FGSDVIVGTATLDMYA 304

Query: 757 ELDQLALKIKEFGYLPDTNF------VLHELEEEQKVQY--LFQHSEKIAVAFGLISTS 807
           + D ++   K F  LPD N       ++     EQ  Q   LF   +K + +F  +S S
Sbjct: 305 KCDNMSDAYKLFSLLPDHNLQSYNAMIIGYARNEQGFQAFKLFLQLQKNSFSFDEVSLS 363


>gi|356567218|ref|XP_003551818.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Glycine max]
          Length = 727

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/643 (37%), Positives = 380/643 (59%), Gaps = 8/643 (1%)

Query: 222 LIDMFVKGSVDLES---AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
           L+   V GS +L     A K+FD+    +   W  +I   ++    RD + ++  M  +G
Sbjct: 90  LMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTG 149

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD FT   V+ AC+EL  F     +H   I+ G   DV V   LV +YAKC   G + 
Sbjct: 150 VHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKC---GHIG 206

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            ++ VFD +    ++SWT+II+GY Q+G +  EA+++FS M    V P+     S+L+A 
Sbjct: 207 VAKVVFDGLYHRTIVSWTSIISGYAQNG-KAVEALRMFSQMRNNGVKPDWIALVSILRAY 265

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            ++ D      ++   +K G   +  +  SL + YA+ G +  A+  F+ +   N++ +N
Sbjct: 266 TDVDDLEQGRSIHGFVIKMGLEDEPALLISLTAFYAKCGLVTVAKSFFDQMKTTNVIMWN 325

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+  YAKN ++E+A  L H +    +   + T  S +  ++ +G++   + +   + KS
Sbjct: 326 AMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKS 385

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
            + S+  +  +LI MY++C +VE A +VF    D++V+ W++MI G+  HG    A+ ++
Sbjct: 386 NYGSDIFVNTSLIDMYAKCGSVEFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLY 445

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
           + M   G+ PN +T+I +L+AC+H+GL+ EGW+ F  M D   IV R EHY+C+VDLLGR
Sbjct: 446 HVMKQAGVFPNDVTFIGLLTACNHSGLVKEGWELFHCMKDFE-IVPRNEHYSCVVDLLGR 504

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           +G L EA  FI  +P+   V VW   L AC+++    LG++AA  +   DP +   ++ L
Sbjct: 505 AGYLGEACAFIMKIPIEPGVSVWGALLSACKIYRCVTLGEYAANKLFSLDPYNTGHYVQL 564

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           SNLYAS+  W+ VA++R  M+E+ L K+ G S IE + K+  FHVG+ SHP   EI+ EL
Sbjct: 565 SNLYASSCLWDCVAHVRVLMREKGLNKDLGYSVIEINGKLQAFHVGDKSHPMAKEIFDEL 624

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
            +L  ++KE G++P T  VLH+L  E+K + L  HSE+IAVA+GLIST+    +R+ KNL
Sbjct: 625 QRLERRLKEVGFVPYTESVLHDLNYEEKEENLSFHSERIAVAYGLISTAPGTTLRITKNL 684

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R C +CH+AIK IS +  REI++RD+NRFHH KDG CSC DYW
Sbjct: 685 RACVNCHSAIKLISKLVEREIIVRDANRFHHFKDGLCSCGDYW 727



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/521 (27%), Positives = 249/521 (47%), Gaps = 46/521 (8%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+ L+ +    R  HL + +H+ L  S L+ N  ++  L++  S  G +  A K+F    
Sbjct: 59  YASLIDNSTHKR--HLDQ-IHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFC 115

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
              D+  W+++I SY       D + M+  M   G  P+ + F  V++AC+   +  +  
Sbjct: 116 YP-DVFMWNAIIRSYSRNNMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSC 174

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
           II+G ++K G F SDV V   L+ ++ K G + +  A  VFD +  +  V WT +I+   
Sbjct: 175 IIHGQIIKYG-FGSDVFVQNGLVALYAKCGHIGV--AKVVFDGLYHRTIVSWTSIISGYA 231

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q G   +A+R+F  M  +G  PD   L  ++ A ++++    G+ +H + I+ GL  +  
Sbjct: 232 QNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +  SL   YAKC   G V  ++  FD+M   NV+ W A+I+GY ++ G  +EAV LF  M
Sbjct: 292 LLISLTAFYAKC---GLVTVAKSFFDQMKTTNVIMWNAMISGYAKN-GHAEEAVNLFHYM 347

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           I   + P+  T  S + A   +    +A+ +  +  K     D  V  SLI MYA+ G +
Sbjct: 348 ISRNIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNYGSDIFVNTSLIDMYAKCGSV 407

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           E AR+ F+   +K++V ++ M+  Y  +    +A  L H ++  GV  +  TF  LL+  
Sbjct: 408 EFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTAC 467

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +           H+ ++K G+E  HC+ +               F++    E      ++
Sbjct: 468 N-----------HSGLVKEGWELFHCMKD---------------FEIVPRNE-----HYS 496

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
            ++    + G+   A     K+    I+P    + A+LSAC
Sbjct: 497 CVVDLLGRAGYLGEACAFIMKI---PIEPGVSVWGALLSAC 534



 Score =  181 bits (460), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 178/333 (53%), Gaps = 9/333 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G HPD  T+  +LK+C    +F L  ++H  + +     +  + N L++LY+KCG 
Sbjct: 145 MRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQNGLVALYAKCGH 204

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +  A  +F  + + R IVSW+S+IS Y   GK V+A+ MF +M   G  P+     +++R
Sbjct: 205 IGVAKVVFDGLYH-RTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVKPDWIALVSILR 263

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           A ++ +++  G  I+GF++K G  D    +  +L   + K G V +  ++  FD+M   N
Sbjct: 264 AYTDVDDLEQGRSIHGFVIKMGLEDEPALL-ISLTAFYAKCGLVTVAKSF--FDQMKTTN 320

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            + W  MI+   + G   +A+ LF  MI     PD  T+   V A +++      + +  
Sbjct: 321 VIMWNAMISGYAKNGHAEEAVNLFHYMISRNIKPDSVTVRSAVLASAQVGSLELAQWMDD 380

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           +  ++    D+ V  SL+DMYAKC   GSV+ +R+VFDR  D +V+ W+A+I GY    G
Sbjct: 381 YVSKSNYGSDIFVNTSLIDMYAKC---GSVEFARRVFDRNSDKDVVMWSAMIMGY-GLHG 436

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           +  EA+ L+  M Q  V PN  TF  +L AC +
Sbjct: 437 QGWEAINLYHVMKQAGVFPNDVTFIGLLTACNH 469



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/274 (26%), Positives = 140/274 (51%), Gaps = 14/274 (5%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +Q++   V  G   +  +   L++  +  G++  ARK F+     ++  +N ++ +Y++N
Sbjct: 73  DQIHNRLVISGLQHNGFLMTKLVNGSSNLGQICYARKLFDEFCYPDVFMWNAIIRSYSRN 132

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
                  E+   +  TGV    +TF  +L   + +   G    IH +IIK GF S+  + 
Sbjct: 133 NMYRDTVEMYRWMRWTGVHPDGFTFPYVLKACTELLDFGLSCIIHGQIIKYGFGSDVFVQ 192

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           N L+++Y++C ++  A  VF  +  R ++SWTS+I+G+A++G A  AL +F +M  +G+K
Sbjct: 193 NGLVALYAKCGHIGVAKVVFDGLYHRTIVSWTSIISGYAQNGKAVEALRMFSQMRNNGVK 252

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM---EHYACMVDL---LGRSGS 641
           P+ I  +++L A +    + +G    RS+   HG V +M   +  A ++ L     + G 
Sbjct: 253 PDWIALVSILRAYTDVDDLEQG----RSI---HGFVIKMGLEDEPALLISLTAFYAKCGL 305

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           +T A  F   M  + +V++W   +     +G  E
Sbjct: 306 VTVAKSFFDQMK-TTNVIMWNAMISGYAKNGHAE 338



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 123/252 (48%), Gaps = 5/252 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+  +A+     M   G  PD      +L++     +   G+ +H  + +  LE    
Sbjct: 232 QNGKAVEALRMFSQMRNNGVKPDWIALVSILRAYTDVDDLEQGRSIHGFVIKMGLEDEPA 291

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +L SL + Y+KCG +  A   F  M    +++ W++MIS Y   G   +A+++F  M+  
Sbjct: 292 LLISLTAFYAKCGLVTVAKSFFDQM-KTTNVIMWNAMISGYAKNGHAEEAVNLFHYMISR 350

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
              P+     + + A +   ++ +   +  ++ K  Y  SD+ V  +LIDM+ K GSV  
Sbjct: 351 NIKPDSVTVRSAVLASAQVGSLELAQWMDDYVSKSNY-GSDIFVNTSLIDMYAKCGSV-- 407

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A +VFD+ ++K+ V W+ MI      G   +AI L+  M  +G  P+  T  G+++AC
Sbjct: 408 EFARRVFDRNSDKDVVMWSAMIMGYGLHGQGWEAINLYHVMKQAGVFPNDVTFIGLLTAC 467

Query: 294 SELELFTSGKQL 305
           +   L   G +L
Sbjct: 468 NHSGLVKEGWEL 479


>gi|15218216|ref|NP_173004.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75191104|sp|Q9M9E2.1|PPR45_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g15510, chloroplastic; Flags: Precursor
 gi|8072389|gb|AAF71977.1|AC013453_2 Hypothetical protein [Arabidopsis thaliana]
 gi|300825685|gb|ADK35876.1| chloroplast vanilla cream 1 [Arabidopsis thaliana]
 gi|332191210|gb|AEE29331.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 866

 Score =  464 bits (1193), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 270/805 (33%), Positives = 453/805 (56%), Gaps = 11/805 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G++++A+  L+ M +     D D +  L++ C   R    G  V+S+   S       +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+ ++++ + G+L +A  +F  M ++R++ SW+ ++  Y  +G   +A+ ++  ML +G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKM-SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190

Query: 176 FC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+ Y F  V+R C    ++A G  ++  +++ GY + D+ V  ALI M+VK   D++
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCG-DVK 248

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           SA  +FD+M  ++ + W  MI+   + G   + + LF  M      PD  TL+ V+SAC 
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L     G+ +H++ I TG A+D+ V  SL  MY      GS  ++ K+F RM   +++S
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA---GSWREAEKLFSRMERKDIVS 365

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WT +I+GY  +   DK A+  +  M Q  V P+  T A+VL AC  L D +   +++  A
Sbjct: 366 WTTMISGYEYNFLPDK-AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K        V N+LI+MY++   ++ A   F ++  KN++S+ +++     N    +A 
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
             L +++ T +  +A T  + L+  + IGA+  G++IHA ++++G   +  + NAL+ MY
Sbjct: 485 IFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            RC  +  A+  F   + ++V SW  ++TG+++ G  +  +E+F +M+   ++P+ IT+I
Sbjct: 544 VRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 602

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L  CS + ++ +G  +F  M D +G+   ++HYAC+VDLLGR+G L EA +FI+ MP+
Sbjct: 603 SLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 661

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
           + D  VW   L ACR+H   +LG+ +A+ I E D +    +ILL NLYA  G W  VA +
Sbjct: 662 TPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKV 721

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R+ MKE  L  +AGCSW+E   KVH F   +  HP+T EI   L+    K+ E G    +
Sbjct: 722 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKIS 781

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
                +  E  + +    HSE+ A+AFGLI+T    PI V KNL +C +CH  +K+IS  
Sbjct: 782 ESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKT 841

Query: 835 TGREIVLRDSNRFHHIKDGKCSCND 859
             REI +RD+  FHH KDG+CSC D
Sbjct: 842 VRREISVRDAEHFHHFKDGECSCGD 866


>gi|296090522|emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/681 (37%), Positives = 397/681 (58%), Gaps = 45/681 (6%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
           +S++I+ C   +++     I    LK G+  S   +G  LID ++K GSV    A KVFD
Sbjct: 81  YSSLIQQCIGIKSITDITKIQSHALKRGFHHS---LGNKLIDAYLKCGSVVY--ARKVFD 135

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           ++  ++ V W  MI    + G  ++AI ++  M+  G LPD FT S V  A S+L L   
Sbjct: 136 EVPHRHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHE 195

Query: 302 GKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           G++ H  ++  G+ + +V VG +LVDMYAK    G + D+R V D+++  +V+ +TA+I 
Sbjct: 196 GQRAHGQSVVLGVGVSNVFVGSALVDMYAKF---GKMRDARLVSDQVVGKDVVLFTALIV 252

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY   G  D E++++F +M +  +  N +T +SVL  CGNL D      ++   VK G  
Sbjct: 253 GYSHHG-EDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG-- 309

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                             +E A            V++ +++    +N   E A     ++
Sbjct: 310 ------------------LESA------------VTWTSVIVGLVQNGREEIALLKFRQM 339

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
             + +  +++T +S+L   SS+  + +G+QIHA ++K G + +  +  ALI  Y +C + 
Sbjct: 340 LRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKCGST 399

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           E A  VF  + + +V+S  SMI  +A++GF   AL++F  M   G++PN +T++ VLSAC
Sbjct: 400 EIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSAC 459

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++AGL+ EG   F S  +   I    +HYACMVDLLGR+G L EA   I  + +S DV++
Sbjct: 460 NNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNIS-DVVI 518

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           WRT L ACR+HGD E+ K     +++  P+D   H+LLSNLYAS G+W  V  ++  M+E
Sbjct: 519 WRTLLSACRIHGDVEMAKRVMNRVIDLAPEDGGTHVLLSNLYASTGNWSKVIEMKSAMRE 578

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             L K    SW++ + ++H F  G+ SHP   +I  +L++L  K+KE GY+PDT FVL +
Sbjct: 579 MRLKKNPAMSWVDVEREIHTFMAGDWSHPNFRDIREKLEELIEKVKELGYVPDTRFVLQD 638

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLI-STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           L+EE+K++ L+ HSEK+AVAF L  S  K+  IR+ KNLRVCGDCHT +K++S + GR+I
Sbjct: 639 LDEEKKIRSLYYHSEKLAVAFALWRSNYKNTTIRILKNLRVCGDCHTWMKFVSKIVGRDI 698

Query: 840 VLRDSNRFHHIKDGKCSCNDY 860
           + RD  RFHH ++G CSC DY
Sbjct: 699 IARDVKRFHHFRNGLCSCGDY 719



 Score =  209 bits (531), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 146/519 (28%), Positives = 259/519 (49%), Gaps = 44/519 (8%)

Query: 78  LDTYSLLLKSCIRSRNF-HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           L  YS L++ CI  ++   + K+    L R     +  + N LI  Y KCG +  A K+F
Sbjct: 78  LQLYSSLIQQCIGIKSITDITKIQSHALKRG---FHHSLGNKLIDAYLKCGSVVYARKVF 134

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             + + R IV+W+SMI+SY+  G+  +AI ++  M+  G  P+E+ FS+V +A S+   V
Sbjct: 135 DEVPH-RHIVAWNSMIASYIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLV 193

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G   +G  +  G   S+V VG AL+DM+ K    +  A  V D++  K+ V +T +I 
Sbjct: 194 HEGQRAHGQSVVLGVGVSNVFVGSALVDMYAKFG-KMRDARLVSDQVVGKDVVLFTALIV 252

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
             +  G   +++++F +M   G   + +TLS V+  C  LE  TSG+ +H   ++ GL  
Sbjct: 253 GYSHHGEDGESLQVFRNMTKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAGL-- 310

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
                                             + ++WT++I G VQ+ GR++ A+  F
Sbjct: 311 ---------------------------------ESAVTWTSVIVGLVQN-GREEIALLKF 336

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M++  + PN FT +SVL+AC +L      +Q++   +K G  +D  VG +LI  Y + 
Sbjct: 337 RQMLRSSITPNSFTLSSVLRACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC 396

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G  E AR  F  L E ++VS N+M+ +YA+N    +A +L   ++DTG+  +  T+  +L
Sbjct: 397 GSTEIARSVFNGLLEVDVVSVNSMIYSYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVL 456

Query: 497 SGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           S  ++ G + +G  I +    SG  E     Y  ++ +  R   ++ A  +  ++   +V
Sbjct: 457 SACNNAGLLEEGCHIFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDV 516

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           + W ++++    HG    A  +  +++ D    +G T++
Sbjct: 517 VIWRTLLSACRIHGDVEMAKRVMNRVI-DLAPEDGGTHV 554



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 122/434 (28%), Positives = 213/434 (49%), Gaps = 45/434 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR ++AI     M   G  PD  T+S + K+       H G+  H       +  +
Sbjct: 152 YIRNGRSKEAIDIYQRMVPDGILPDEFTFSSVFKAFSDLGLVHEGQRAHGQSVVLGVGVS 211

Query: 113 SVILNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +V + S L+ +Y+K G + +A  +   +  K D+V ++++I  Y + G+  +++ +F  M
Sbjct: 212 NVFVGSALVDMYAKFGKMRDARLVSDQVVGK-DVVLFTALIVGYSHHGEDGESLQVFRNM 270

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            + G   NEY  S+V+  C N E++  G +I+G ++K G                     
Sbjct: 271 TKKGIEANEYTLSSVLVCCGNLEDLTSGRLIHGLIVKAG--------------------- 309

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            LESA            V WT +I    Q G    A+  F  M+ S   P+ FTLS V+ 
Sbjct: 310 -LESA------------VTWTSVIVGLVQNGREEIALLKFRQMLRSSITPNSFTLSSVLR 356

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L +   GKQ+H+  ++ GL +D  VG +L+D Y KC   GS + +R VF+ +L+ +
Sbjct: 357 ACSSLAMLEQGKQIHAIVMKFGLDIDKYVGAALIDFYGKC---GSTEIARSVFNGLLEVD 413

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQ 409
           V+S  ++I  Y Q+ G   EA++LFS M    + PN+ T+  VL AC N  LL+      
Sbjct: 414 VVSVNSMIYSYAQN-GFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGC--H 470

Query: 410 VYTHAVKRGR-ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +++ A   G   L       ++ +  R+GR+++A      +   ++V + T++ A   + 
Sbjct: 471 IFSSARNSGNIELTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACRIHG 530

Query: 469 NSEKAFELLHEIED 482
           + E A  +++ + D
Sbjct: 531 DVEMAKRVMNRVID 544


>gi|297610920|ref|NP_001065364.2| Os10g0558600 [Oryza sativa Japonica Group]
 gi|255679629|dbj|BAF27201.2| Os10g0558600 [Oryza sativa Japonica Group]
          Length = 863

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/737 (34%), Positives = 426/737 (57%), Gaps = 15/737 (2%)

Query: 54  LNDGRVQKAIF--TLDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           L  G  Q+ +F  ++DL   M ++G  PD  T+++LLKSC       LG  VH+L  ++ 
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           LE +    ++L+ +Y KC  L++A   F  M  +R+ VSW + I+  V   + V  + +F
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQNEQYVRGLELF 238

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           +EM  LG   ++  +++  R+C+    +  G  ++   +K   F SD  VG A++D++ K
Sbjct: 239 IEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK-NKFSSDRVVGTAIVDVYAK 297

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            +  L  A + F  +          M+    + G   +A+ LF  MI S    D  +LSG
Sbjct: 298 AN-SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 356

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V SAC+E + +  G+Q+H  AI++G  +D+CV  +++D+Y KC    ++ ++  +F  M 
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCK---ALMEAYLIFQGMK 413

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             + +SW AII    Q+G  D + +  F++M++  + P+ FT+ SVLKAC  L       
Sbjct: 414 QKDSVSWNAIIAALEQNGHYD-DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+   +K G   D  V ++++ MY + G +++A+K  + +  + +VS+N ++  ++ N 
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
            SE+A +   E+ D G+    +TFA++L   +++  I  G+QIH +IIK     +  I +
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            L+ MY++C ++  +  VF+++E R+ +SW +MI G+A HG    AL +F +M  + + P
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVP 652

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N  T++AVL ACSH GL  +G ++F  M   + +  ++EH+ACMVD+LGRS    EA++F
Sbjct: 653 NHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKF 712

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I SMP  AD ++W+T L  C++  D E+ + AA  +L  DP D + +ILLSN+YA +G W
Sbjct: 713 INSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKW 772

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             V+  R+ +K+  L KE GCSWIE  +++H F VG+ +HP++ E+Y  L+ L  ++K  
Sbjct: 773 ADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 832

Query: 769 GYLPDT-NFVLHELEEE 784
           GY PD+ +FV  E++EE
Sbjct: 833 GYEPDSASFV--EVDEE 847



 Score =  249 bits (637), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/572 (26%), Positives = 297/572 (51%), Gaps = 12/572 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++V  N++++ YS  GD++ A  +F  M +  D+VSW++++S Y  RG   +++ +FVEM
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+   F+ ++++CS  E +++G  ++   +K G  + DV  G AL+DM+ K   
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG-LEIDVRTGSALVDMYGKCR- 198

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+ A   F  M E+N V W   I  C Q       + LF++M   G    + + +    
Sbjct: 199 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 258

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +C+ +    +G+QLH+ AI+   + D  VG ++VD+YAK     S+ D+R+ F  + +H 
Sbjct: 259 SCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN---SLTDARRAFFGLPNHT 315

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V +  A++ G V++ G   EA+ LF  MI+  +  +  + + V  AC         +QV+
Sbjct: 316 VETSNAMMVGLVRA-GLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             A+K G  +D CV N+++ +Y +   + +A   F+ + +K+ VS+N ++ A  +N + +
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
                 +E+   G+    +T+ S+L   +++ ++  G  +H ++IKSG  S+  + + ++
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 494

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  ++ A ++   +  + V+SW ++++GF+ +  +  A + F +ML  G+KP+  
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 554

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+  VL  C++   I  G K       +  ++      + +VD+  + G + ++L     
Sbjct: 555 TFATVLDTCANLATIELG-KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 613

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
           +    D + W   +    +HG   LG  A  M
Sbjct: 614 VE-KRDFVSWNAMICGYALHG---LGVEALRM 641



 Score = 62.0 bits (149), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 81/186 (43%), Gaps = 33/186 (17%)

Query: 514 RIIKSGFESNHCIYNALISM-------------------------------YSRCANVEA 542
           R++ SGF     + N L+ M                               YS   ++  
Sbjct: 42  RMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDIST 101

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  +F  M D +V+SW ++++G+ + G    ++++F +M   G+ P+  T+  +L +CS 
Sbjct: 102 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 161

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
              +S G +   ++  + G+   +   + +VD+ G+  SL +AL F   MP   + + W 
Sbjct: 162 LEELSLGVQ-VHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWG 219

Query: 663 TFLGAC 668
             +  C
Sbjct: 220 AAIAGC 225


>gi|449523219|ref|XP_004168621.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 755

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/688 (35%), Positives = 406/688 (59%), Gaps = 19/688 (2%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++ C +        +I+G ++K G F  D+ V   L++++ K  V +ESA+KVFD +  
Sbjct: 70  LLQECIDRNLATEARMIHGHIVKTG-FHEDLFVMTFLVNVYSKCGV-MESAHKVFDNLPR 127

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N   WT ++T   Q   P  A++LF+ M+ +G  P  +TL  V++ACS L+    GKQ+
Sbjct: 128 RNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQV 187

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H++ I+  +  D  +G SL   Y+K      ++ + K F  + + +V+SWT++I+    +
Sbjct: 188 HAYLIKYHIDFDTSIGNSLSSFYSKFR---RLEFAIKAFKIIKEKDVISWTSVISSCCDN 244

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G +   ++  F DM+   + PN +T  SVL AC  +L  ++  Q+++ ++K G      +
Sbjct: 245 G-QAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILI 303

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN-----------SEKAF 474
            NS++ +Y + G + +A+K FE +   NLV++N M+  +AK ++              A 
Sbjct: 304 KNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTAL 363

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            +  ++  +G+    +TF+S+LS  S++ A+ +GEQIH +IIKSG  ++  +  AL+SMY
Sbjct: 364 AMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMY 423

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C +++ A + F EM  R +ISWTSMITGFA+HG + +AL++F  M   GIKPN +T++
Sbjct: 424 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 483

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            VLSACSHAGL  E   +F  M  ++ I   M+H+AC++D+  R G + EA + +  M  
Sbjct: 484 GVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF 543

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             +  +W   +  CR HG ++LG +AAE +L+  P+D   ++ L N++ SAG W+ V+ +
Sbjct: 544 EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKV 603

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP-- 772
           RK MKE  + K    SWI    KV+ F   + SH ++LE+Y  L+ +  ++K  GY P  
Sbjct: 604 RKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIE 663

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D   +  E  EE+ +     HSEK+A+AFGL++   + PIRV K++ +C DCH  I++IS
Sbjct: 664 DVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFIS 723

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           ++ GREIV+RDS + H   +G CSC  Y
Sbjct: 724 LLKGREIVIRDSKQLHKFLNGYCSCGGY 751



 Score =  250 bits (639), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 161/592 (27%), Positives = 300/592 (50%), Gaps = 37/592 (6%)

Query: 35  PFIAQPTTSEPLSNRLIYHLNDGRV--QKAIFTLDLMTQKGNHPDLDT------YSLLLK 86
           P     T S PL+++      D  V  QK    + L       P L T      Y  LL+
Sbjct: 19  PRKRHSTASFPLNDK------DKSVGFQKNHSLIQLNVVDAEEPKLGTRIESSYYFPLLQ 72

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
            CI        +++H  + ++    +  ++  L+++YSKCG +  A+K+F ++  +R++ 
Sbjct: 73  ECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESAHKVFDNLP-RRNVN 131

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           +W+++++ YV     + A+ +F++MLE G  P+ Y    V+ ACS+ +++  G  ++ +L
Sbjct: 132 AWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYL 191

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
           +K  + D D  +G +L   + K    LE A K F  + EK+ + WT +I+ C   G    
Sbjct: 192 IKY-HIDFDTSIGNSLSSFYSKFR-RLEFAIKAFKIIKEKDVISWTSVISSCCDNGQAAR 249

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           ++  F+DM+  G  P+ +TL+ V+SAC  +     G Q+HS +I+ G    + +  S++ 
Sbjct: 250 SLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILIKNSIMY 309

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY----------VQSGGRDKEAVKLF 376
           +Y KC   G + +++K+F+ M   N+++W A+I G+          V +      A+ +F
Sbjct: 310 LYLKC---GWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMF 366

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             + +  + P+ FTF+SVL  C NL+     EQ++   +K G   D  VG +L+SMY + 
Sbjct: 367 QKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC 426

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G ++ A KAF  +  + ++S+ +M+  +A++  S++A +L  ++   G+  +  TF  +L
Sbjct: 427 GSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFVGVL 486

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME-DR 553
           S  S  G +      +  +++  +     +  +  LI MY R   VE AF V  +M  + 
Sbjct: 487 SACSHAG-LADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEP 545

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLSACSHAG 604
           N   W+ +I G   HG +        ++L   +KP  + TY+++L+    AG
Sbjct: 546 NETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLLNMHISAG 595


>gi|224108029|ref|XP_002314694.1| predicted protein [Populus trichocarpa]
 gi|222863734|gb|EEF00865.1| predicted protein [Populus trichocarpa]
          Length = 631

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/632 (38%), Positives = 371/632 (58%), Gaps = 6/632 (0%)

Query: 231 VDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +DL +  ++  ++T  +  V WT +I+   Q G    A+  F  M      P+ FT    
Sbjct: 5   LDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFPCA 64

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
             A + L L  +GKQ+H+ A++ G   D  VGCS  DMY+K    G   +++++FD M  
Sbjct: 65  FKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSK---TGLKFEAQRLFDEMPP 121

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV  W A I+  V  G R  +A+  F +  +    P+  TF + L AC +    ++  Q
Sbjct: 122 RNVAVWNAYISNAVLDG-RPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQ 180

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   ++ G   D  V N +I +Y +   +E A   F  +  +N VS+ TMV A  +N  
Sbjct: 181 LHGLVIRSGFEGDVSVANGIIDVYGKCKEVELAEMVFNGMGRRNSVSWCTMVAACEQNDE 240

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            EKA  +       G+  + Y  +S++S  + I  +  G  +HA  +K+  E +  + +A
Sbjct: 241 KEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGSA 300

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L+ MY +C ++E   QVF EM +RN++SW +MI+G+A  G    A+ +F +M ++ +  N
Sbjct: 301 LVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQSEAV-AN 359

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T I VLSACS  G +  G + F SM D + I    EHYAC+ D+LGR+G +  A EF+
Sbjct: 360 YVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVERAYEFV 419

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           + MP+   + VW   L ACRV+G+ ELGK AA+ + + DP+D   H+LLSN++A+AG W+
Sbjct: 420 QKMPIRPTISVWGALLNACRVYGEPELGKIAADNLFKLDPKDSGNHVLLSNMFAAAGRWD 479

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
               +RK MK+  + K AGCSW+ A NKVH F   +TSH +  EI A L +L  +++  G
Sbjct: 480 EATLVRKEMKDVGIKKGAGCSWVTAKNKVHVFQAKDTSHERNSEIQAMLVKLRTEMQAAG 539

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+PDTN+ L++LEEE+K+  +  HSEKIA+AFGLI+     PIR+ KNLR+CGDCH+A K
Sbjct: 540 YMPDTNYALYDLEEEEKMTEVGYHSEKIALAFGLIALPPGVPIRITKNLRICGDCHSAFK 599

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +IS + GREI++RD+NRFH  +D +CSC D+W
Sbjct: 600 FISGIVGREIIVRDNNRFHRFRDSQCSCRDFW 631



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 129/454 (28%), Positives = 209/454 (46%), Gaps = 18/454 (3%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YSK  DL    ++   +   R +V+W+++IS  V  G    A+  F +M      PN++
Sbjct: 1   MYSKL-DLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDF 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F    +A +       G  I+   LK G  + D  VGC+  DM+ K  +  E A ++FD
Sbjct: 60  TFPCAFKASTALCLPFAGKQIHAIALKLGQIN-DKFVGCSAFDMYSKTGLKFE-AQRLFD 117

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           +M  +N   W   I+     G P  AI  F++    G  PD  T    ++AC++      
Sbjct: 118 EMPPRNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDL 177

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+QLH   IR+G   DV V   ++D+Y KC     V+ +  VF+ M   N +SW  ++  
Sbjct: 178 GRQLHGLVIRSGFEGDVSVANGIIDVYGKCK---EVELAEMVFNGMGRRNSVSWCTMVAA 234

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
             Q+  ++K  V       +G +    +  +SV+ A   +        V+  AVK     
Sbjct: 235 CEQNDEKEKACVVFLMGRKEG-IELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEG 293

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  VG++L+ MY + G +ED  + F  + E+NLVS+N M+  YA   + + A  L  E++
Sbjct: 294 DIFVGSALVDMYGKCGSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDMAMTLFEEMQ 353

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHCIYNALISMYSR 536
              V     T   +LS  S  GA+  G +I   +     I+ G E   CI +    M  R
Sbjct: 354 SEAVANYV-TLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIAD----MLGR 408

Query: 537 CANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG 569
              VE A++  ++M  R  IS W +++     +G
Sbjct: 409 AGMVERAYEFVQKMPIRPTISVWGALLNACRVYG 442



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 200/421 (47%), Gaps = 10/421 (2%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           S+ +LP  +       PT        LI   + +G    A+     M ++   P+  T+ 
Sbjct: 3   SKLDLPNPAQLLLQLTPTRCVVTWTALISGSVQNGYFSSALLYFSKMRRENIKPNDFTFP 62

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
              K+         GK +H++  +     +  +  S   +YSK G   EA ++F  M   
Sbjct: 63  CAFKASTALCLPFAGKQIHAIALKLGQINDKFVGCSAFDMYSKTGLKFEAQRLFDEM-PP 121

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R++  W++ IS+ V  G+   AI  F+E   +G  P+   F A + AC++   + +G  +
Sbjct: 122 RNVAVWNAYISNAVLDGRPGKAIDKFIEFRRVGGEPDLITFCAFLNACADARCLDLGRQL 181

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +G +++ G F+ DV V   +ID++ K   ++E A  VF+ M  +N+V W  M+  C Q  
Sbjct: 182 HGLVIRSG-FEGDVSVANGIIDVYGKCK-EVELAEMVFNGMGRRNSVSWCTMVAACEQND 239

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
               A  +FL     G     + +S V+SA + +     G+ +H+ A++  +  D+ VG 
Sbjct: 240 EKEKACVVFLMGRKEGIELTDYMVSSVISAYAGISGLEFGRSVHALAVKACVEGDIFVGS 299

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +LVDMY KC   GS++D  +VF  M + N++SW A+I+GY   G  D  A+ LF +M Q 
Sbjct: 300 ALVDMYGKC---GSIEDCEQVFHEMPERNLVSWNAMISGYAHQGDVDM-AMTLFEEM-QS 354

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS-MYARSGRMED 441
           +   N+ T   VL AC       +  +++     R R        + I+ M  R+G +E 
Sbjct: 355 EAVANYVTLICVLSACSRGGAVKLGNEIFESMRDRYRIEPGAEHYACIADMLGRAGMVER 414

Query: 442 A 442
           A
Sbjct: 415 A 415


>gi|347954514|gb|AEP33757.1| organelle transcript processing 82, partial [Aethionema
           cordifolium]
          Length = 679

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/655 (38%), Positives = 384/655 (58%), Gaps = 35/655 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF  + E N + W  MI        P  A+ L++ MI  G  P+ +T   +  +
Sbjct: 28  LPYAISVFKSIQEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKS 87

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ +    GKQ+H+  ++ GL +D+ V  SL+ MYA+   +G V+D+ KVFD     +V
Sbjct: 88  CAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQ---NGIVEDAHKVFDTSSHRDV 144

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
           +S+TA+ITGY   G                              GR KEA++LF++M++ 
Sbjct: 145 VSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKM 204

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V P+  T A+VL  C +  +  +  Q+++     G   +  + N+LI +Y++ G ME A
Sbjct: 205 DVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKCGEMERA 264

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              FE L  K+++S+NT++  YA   + ++A  +  E+   G   +  T  S+L   + +
Sbjct: 265 HGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLGETPNDVTMLSILPACAHL 324

Query: 503 GAIGKGEQIHARIIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           GAI  G  IH  I K   G  +N  +  +LI MY++C N+EAA QVF  + ++++ S  +
Sbjct: 325 GAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNA 384

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI GFA HG A  A ++  +M  DGI+P+ IT++ +LSACSHAGL   G K F+SM  ++
Sbjct: 385 MIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDY 444

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I  ++EHY CM+DLLGRSG   EA E I SM +  D ++W + L AC++H + ELG+  
Sbjct: 445 RIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVIWGSLLKACKIHKNLELGELI 504

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +++ +P++P +++LLSN+YA++  W+ VA +R  + ++ L K  GCS IE D+ VH+
Sbjct: 505 AQKLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGLKKVPGCSSIEIDSMVHE 564

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F +G+  HP+  EIY  L+++   + E G++ DT+ VL E+EEE K   L  HSEK+A+A
Sbjct: 565 FLIGDKFHPQNKEIYKMLEEIDSLLAETGFVSDTSEVLQEMEEELKEGALSYHSEKLAIA 624

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           FGLIST     +R+ KNLRVC +CH A K IS +  REI+ RD +RFHH KDG C
Sbjct: 625 FGLISTKPGTKLRIVKNLRVCRNCHEATKLISKIYKREIIARDRSRFHHFKDGMC 679



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 230/472 (48%), Gaps = 42/472 (8%)

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A  +FKS+  + + +SW++MI  +      + A++++V M+ LG  PN Y F  + ++C+
Sbjct: 31  AISVFKSI-QEPNQLSWNTMIRGHALSSDPISALNLYVYMISLGLSPNSYTFPFLFKSCA 89

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV-------------------- 231
            ++    G  I+  +LK G    D+ V  +LI M+ +  +                    
Sbjct: 90  KSKAAQEGKQIHAQILKYG-LTVDLHVHTSLISMYAQNGIVEDAHKVFDTSSHRDVVSYT 148

Query: 232 ----------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
                     +++ A K+FD++  K+ V W  MI+   ++G  ++A+ LF +M+     P
Sbjct: 149 AMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEIGRYKEALELFNEMMKMDVKP 208

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D  T++ V+S C+       G+Q+HSW    G   ++ +  +L+D+Y+KC   G ++ + 
Sbjct: 209 DESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLVNALIDLYSKC---GEMERAH 265

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            +F+ +   +V+SW  +I GY       KEA+ +F +M++    PN  T  S+L AC +L
Sbjct: 266 GLFEGLQYKDVISWNTLIGGYAYI-NHHKEALLVFQEMLKLGETPNDVTMLSILPACAHL 324

Query: 402 LDSNVAEQVYTHAVKRGRAL--DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
              ++   ++ +  K+ + +  +  +  SLI MYA+ G +E A + F+++  K+L S N 
Sbjct: 325 GAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCGNIEAANQVFDTILNKSLSSCNA 384

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKS 518
           M+  +A +  ++ AF+LL  ++  G+     TF  LLS  S  G    G +I   + +  
Sbjct: 385 MIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSHAGLSDLGRKIFKSMTLDY 444

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKE--MEDRNVISWTSMITGFAKH 568
             E     Y  +I +  R    + A ++     ME   VI W S++     H
Sbjct: 445 RIEPKLEHYGCMIDLLGRSGLFKEAEELINSMTMEPDGVI-WGSLLKACKIH 495



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 219/434 (50%), Gaps = 50/434 (11%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  L KSC +S+    GK +H+ + +  L  +  +  SLIS+Y++ G 
Sbjct: 69  MISLGLSPNSYTFPFLFKSCAKSKAAQEGKQIHAQILKYGLTVDLHVHTSLISMYAQNGI 128

Query: 129 LNEANKIFK------------------SMGNK------------RDIVSWSSMISSYVNR 158
           + +A+K+F                   S GN             +D+VSW++MIS Y   
Sbjct: 129 VEDAHKVFDTSSHRDVVSYTAMITGYASRGNMDKAQKMFDEIPIKDVVSWNAMISGYAEI 188

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G+  +A+ +F EM+++   P+E   + V+  C+++ NV +G  I+ ++   G F S++ +
Sbjct: 189 GRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHG-FGSNLKL 247

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             ALID++ K   ++E A+ +F+ +  K+ + W  +I     +   ++A+ +F +M+  G
Sbjct: 248 VNALIDLYSKCG-EMERAHGLFEGLQYKDVISWNTLIGGYAYINHHKEALLVFQEMLKLG 306

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTVDGS 336
             P+  T+  ++ AC+ L     G+ +H +  +   G+  +  +  SL+DMYAKC   G+
Sbjct: 307 ETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKC---GN 363

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           ++ + +VFD +L+ ++ S  A+I G+    GR   A  L S M +  + P+  TF  +L 
Sbjct: 364 IEAANQVFDTILNKSLSSCNAMIFGFAMH-GRADAAFDLLSRMKKDGIEPDDITFVGLLS 422

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL------ISMYARSGRMEDARKAFESL- 449
           AC +   S++  +++     +   LD  +   L      I +  RSG  ++A +   S+ 
Sbjct: 423 ACSHAGLSDLGRKIF-----KSMTLDYRIEPKLEHYGCMIDLLGRSGLFKEAEELINSMT 477

Query: 450 FEKNLVSYNTMVDA 463
            E + V + +++ A
Sbjct: 478 MEPDGVIWGSLLKA 491



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/401 (25%), Positives = 185/401 (46%), Gaps = 45/401 (11%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR ++A+   + M +    PD  T + +L +C  S N  LG+ +HS +       N  ++
Sbjct: 189 GRYKEALELFNEMMKMDVKPDESTMATVLSTCTHSGNVELGRQIHSWIDNHGFGSNLKLV 248

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LYSKCG++  A+ +F+ +  K D++SW+++I  Y       +A+ +F EML+LG 
Sbjct: 249 NALIDLYSKCGEMERAHGLFEGLQYK-DVISWNTLIGGYAYINHHKEALLVFQEMLKLGE 307

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFL-LKCGYFDSDVCVGCALIDMFVKGSVDLES 235
            PN+    +++ AC++   + IG  I+ ++  K     ++  +  +LIDM+ K   ++E+
Sbjct: 308 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGIITNTSLQTSLIDMYAKCG-NIEA 366

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD +  K+      MI      G    A  L   M   G  PD  T  G++SACS 
Sbjct: 367 ANQVFDTILNKSLSSCNAMIFGFAMHGRADAAFDLLSRMKKDGIEPDDITFVGLLSACSH 426

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
             L   G+++                      +   T+D  ++   + +  M+D      
Sbjct: 427 AGLSDLGRKI----------------------FKSMTLDYRIEPKLEHYGCMID------ 458

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
                  +   G  KEA +L + M    + P+   + S+LKAC    +  + E +   A 
Sbjct: 459 ------LLGRSGLFKEAEELINSM---TMEPDGVIWGSLLKACKIHKNLELGELI---AQ 506

Query: 416 KRGRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
           K  +      G+ ++  ++YA S R +D  +    L +K L
Sbjct: 507 KLMKIEPKNPGSYVLLSNIYATSARWDDVARVRTLLNDKGL 547


>gi|356503704|ref|XP_003520645.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 855

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 247/695 (35%), Positives = 401/695 (57%), Gaps = 9/695 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TY  L+ +C   R+   GK +H  + +S  +P+ V+ N ++++Y KCG L +A K F +M
Sbjct: 159 TYGNLILACTSIRSLKYGKKIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM 218

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
              R++VSW+ MIS Y   G++ DAI M+++ML+ G+ P+   F ++I+AC    ++ +G
Sbjct: 219 -QLRNVVSWTIMISGYSQNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLG 277

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             ++G ++K GY D  +    ALI M+ +    +  A  VF  ++ K+ + W  MIT  T
Sbjct: 278 RQLHGHVIKSGY-DHHLIAQNALISMYTRFG-QIVHASDVFTMISTKDLISWASMITGFT 335

Query: 260 QLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           QLG   +A+ LF DM   GF  P+ F    V SAC  L     G+Q+H    + GL  +V
Sbjct: 336 QLGYEIEALYLFRDMFRQGFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFGLGRNV 395

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
             GCSL DMYAK    G +  + + F ++   +++SW AII  +  SG  + EA+  F  
Sbjct: 396 FAGCSLCDMYAKF---GFLPSAIRAFYQIESPDLVSWNAIIAAFSDSGDVN-EAIYFFCQ 451

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M+   + P+  TF S+L ACG+ +  N   Q++++ +K G   +  V NSL++MY +   
Sbjct: 452 MMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCSN 511

Query: 439 MEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           + DA   F+ + E  NLVS+N ++ A  ++  + + F L   +  +       T  ++L 
Sbjct: 512 LHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFRLFKLMLFSENKPDNITITTILG 571

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + + ++  G Q+H   +KSG   +  + N LI MY++C +++ A  VF   ++ +++S
Sbjct: 572 TCAELASLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVS 631

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W+S+I G+A+ G    AL +F  M   G++PN +TY+ VLSACSH GL+ EGW  + +M 
Sbjct: 632 WSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTME 691

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            E GI    EH +CMVDLL R+G L EA  FI+ M  + D+ +W+T L +C+ HG+ ++ 
Sbjct: 692 IELGIPPTREHVSCMVDLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIA 751

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           + AAE IL+ DP + AA +LLSN++AS G+W+ VA +R  MK+  + K  G SWI   ++
Sbjct: 752 ERAAENILKLDPSNSAALVLLSNIHASVGNWKEVARLRNLMKQMGVQKVPGQSWIAVKDQ 811

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           +H F   + SH +  +IY  L+ L L++ + GY P
Sbjct: 812 IHVFFSEDNSHQQRGDIYTMLEDLWLQMLDDGYDP 846



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 154/534 (28%), Positives = 273/534 (51%), Gaps = 14/534 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+   AI     M Q G  PD  T+  ++K+C  + +  LG+ +H  + +S  + + +
Sbjct: 235 QNGQENDAIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLI 294

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
             N+LIS+Y++ G +  A+ +F +M + +D++SW+SMI+ +   G +++A+++F +M   
Sbjct: 295 AQNALISMYTRFGQIVHASDVF-TMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQ 353

Query: 175 GFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           GF  PNE+ F +V  AC +      G  I+G   K G    +V  GC+L DM+ K    L
Sbjct: 354 GFYQPNEFIFGSVFSACRSLLEPEFGRQIHGMCAKFG-LGRNVFAGCSLCDMYAKFGF-L 411

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            SA + F ++   + V W  +I   +  G   +AI  F  M+ +G +PD  T   ++ AC
Sbjct: 412 PSAIRAFYQIESPDLVSWNAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCAC 471

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF-DRMLDHNV 352
                   G Q+HS+ I+ GL  +  V  SL+ MY KC+   ++ D+  VF D   + N+
Sbjct: 472 GSPVTINQGTQIHSYIIKIGLDKEAAVCNSLLTMYTKCS---NLHDAFNVFKDVSENANL 528

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW AI++  +Q   +  E  +LF  M+  +  P++ T  ++L  C  L    V  QV+ 
Sbjct: 529 VSWNAILSACLQH-KQAGEVFRLFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHC 587

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            +VK G  +D  V N LI MYA+ G ++ AR  F S    ++VS+++++  YA+     +
Sbjct: 588 FSVKSGLVVDVSVSNRLIDMYAKCGSLKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHE 647

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALI 531
           A  L   +++ GV  +  T+  +LS  S IG + +G   +  + I+ G        + ++
Sbjct: 648 ALNLFRMMKNLGVQPNEVTYLGVLSACSHIGLVEEGWHFYNTMEIELGIPPTREHVSCMV 707

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKM 581
            + +R   +  A    K+M  + ++  W +++     HG    A RA E   K+
Sbjct: 708 DLLARAGCLYEAENFIKKMGFNPDITMWKTLLASCKTHGNVDIAERAAENILKL 761



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/330 (25%), Positives = 156/330 (47%), Gaps = 18/330 (5%)

Query: 48  NRLIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I   +D G V +AI+    M   G  PD  T+  LL +C      + G  +HS + +
Sbjct: 430 NAIIAAFSDSGDVNEAIYFFCQMMHTGLMPDGITFLSLLCACGSPVTINQGTQIHSYIIK 489

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
             L+  + + NSL+++Y+KC +L++A  +FK +    ++VSW++++S+ +   +  +   
Sbjct: 490 IGLDKEAAVCNSLLTMYTKCSNLHDAFNVFKDVSENANLVSWNAILSACLQHKQAGEVFR 549

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  ML     P+    + ++  C+   ++ +G+ ++ F +K G    DV V   LIDM+
Sbjct: 550 LFKLMLFSENKPDNITITTILGTCAELASLEVGNQVHCFSVKSGLV-VDVSVSNRLIDMY 608

Query: 227 VK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
            K GS  L+ A  VF      + V W+ +I    Q G   +A+ LF  M   G  P+  T
Sbjct: 609 AKCGS--LKHARDVFGSTQNPDIVSWSSLIVGYAQFGLGHEALNLFRMMKNLGVQPNEVT 666

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDS 340
             GV+SACS + L   G   ++        +++ +G      +  C VD     G + ++
Sbjct: 667 YLGVLSACSHIGLVEEGWHFYN-------TMEIELGIPPTREHVSCMVDLLARAGCLYEA 719

Query: 341 RKVFDRM-LDHNVMSWTAIITGYVQSGGRD 369
                +M  + ++  W  ++      G  D
Sbjct: 720 ENFIKKMGFNPDITMWKTLLASCKTHGNVD 749



 Score = 99.0 bits (245), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 128/239 (53%), Gaps = 16/239 (6%)

Query: 455 VSYNTMVDAYAKNLNSEKAFELLH-EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +S N+ ++   K  +  +A +  +   +++ +   + T+ +L+   +SI ++  G++IH 
Sbjct: 122 LSTNSYINLMCKQRHYREALDTFNFHPKNSSIQLESSTYGNLILACTSIRSLKYGKKIHD 181

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
            I+KS  + +  + N +++MY +C +++ A + F  M+ RNV+SWT MI+G++++G    
Sbjct: 182 HILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRNVVSWTIMISGYSQNGQEND 241

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH----FRSMYDEHGIVQRMEHY 629
           A+ ++ +ML  G  P+ +T+ +++ AC  AG I  G +      +S YD H I Q     
Sbjct: 242 AIIMYIQMLQSGYFPDPLTFGSIIKACCIAGDIDLGRQLHGHVIKSGYDHHLIAQN---- 297

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
             ++ +  R G +  A + + +M  + D++ W     A  + G T+LG     + L +D
Sbjct: 298 -ALISMYTRFGQIVHASD-VFTMISTKDLISW-----ASMITGFTQLGYEIEALYLFRD 349


>gi|222613253|gb|EEE51385.1| hypothetical protein OsJ_32436 [Oryza sativa Japonica Group]
          Length = 863

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/737 (34%), Positives = 426/737 (57%), Gaps = 15/737 (2%)

Query: 54  LNDGRVQKAIF--TLDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           L  G  Q+ +F  ++DL   M ++G  PD  T+++LLKSC       LG  VH+L  ++ 
Sbjct: 120 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 179

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           LE +    ++L+ +Y KC  L++A   F  M  +R+ VSW + I+  V   + V  + +F
Sbjct: 180 LEIDVRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQNEQYVRGLELF 238

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           +EM  LG   ++  +++  R+C+    +  G  ++   +K   F SD  VG A++D++ K
Sbjct: 239 IEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK-NKFSSDRVVGTAIVDVYAK 297

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            +  L  A + F  +          M+    + G   +A+ LF  MI S    D  +LSG
Sbjct: 298 AN-SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 356

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V SAC+E + +  G+Q+H  AI++G  +D+CV  +++D+Y KC    ++ ++  +F  M 
Sbjct: 357 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCK---ALMEAYLIFQGMK 413

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             + +SW AII    Q+G  D + +  F++M++  + P+ FT+ SVLKAC  L       
Sbjct: 414 QKDSVSWNAIIAALEQNGHYD-DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 472

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+   +K G   D  V ++++ MY + G +++A+K  + +  + +VS+N ++  ++ N 
Sbjct: 473 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 532

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
            SE+A +   E+ D G+    +TFA++L   +++  I  G+QIH +IIK     +  I +
Sbjct: 533 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 592

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            L+ MY++C ++  +  VF+++E R+ +SW +MI G+A HG    AL +F +M  + + P
Sbjct: 593 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVP 652

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N  T++AVL ACSH GL  +G ++F  M   + +  ++EH+ACMVD+LGRS    EA++F
Sbjct: 653 NHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKF 712

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I SMP  AD ++W+T L  C++  D E+ + AA  +L  DP D + +ILLSN+YA +G W
Sbjct: 713 INSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKW 772

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             V+  R+ +K+  L KE GCSWIE  +++H F VG+ +HP++ E+Y  L+ L  ++K  
Sbjct: 773 ADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 832

Query: 769 GYLPDT-NFVLHELEEE 784
           GY PD+ +FV  E++EE
Sbjct: 833 GYEPDSASFV--EVDEE 847



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 297/573 (51%), Gaps = 12/573 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++V  N++++ YS  GD++ A  +F  M +  D+VSW++++S Y  RG   +++ +FVEM
Sbjct: 82  DTVSWNTMLTAYSHAGDISTAVALFDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEM 140

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+   F+ ++++CS  E +++G  ++   +K G  + DV  G AL+DM+ K   
Sbjct: 141 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG-LEIDVRTGSALVDMYGKCR- 198

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+ A   F  M E+N V W   I  C Q       + LF++M   G    + + +    
Sbjct: 199 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 258

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +C+ +    +G+QLH+ AI+   + D  VG ++VD+YAK     S+ D+R+ F  + +H 
Sbjct: 259 SCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN---SLTDARRAFFGLPNHT 315

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V +  A++ G V++ G   EA+ LF  MI+  +  +  + + V  AC         +QV+
Sbjct: 316 VETSNAMMVGLVRA-GLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 374

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             A+K G  +D CV N+++ +Y +   + +A   F+ + +K+ VS+N ++ A  +N + +
Sbjct: 375 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 434

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
                 +E+   G+    +T+ S+L   +++ ++  G  +H ++IKSG  S+  + + ++
Sbjct: 435 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 494

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  ++ A ++   +  + V+SW ++++GF+ +  +  A + F +ML  G+KP+  
Sbjct: 495 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 554

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+  VL  C++   I  G K       +  ++      + +VD+  + G + ++L     
Sbjct: 555 TFATVLDTCANLATIELG-KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 613

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           +    D + W   +    +HG   LG  A  M 
Sbjct: 614 VE-KRDFVSWNAMICGYALHG---LGVEALRMF 642



 Score =  209 bits (531), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 139/527 (26%), Positives = 260/527 (49%), Gaps = 38/527 (7%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+ +A  +FD M + + V W  +++   Q G  ++++ LF++M   G  PDR T + ++ 
Sbjct: 98  DISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLK 157

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +CS LE  + G Q+H+ A++TGL +DV  G +LVDMY KC    S+DD+   F  M + N
Sbjct: 158 SCSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCR---SLDDALCFFYGMPERN 214

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            +SW A I G VQ+  +    ++LF +M +  +  +  ++AS  ++C  +   N   Q++
Sbjct: 215 WVSWGAAIAGCVQN-EQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLH 273

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            HA+K   + D  VG +++ +YA++  + DAR+AF  L    + + N M+    +     
Sbjct: 274 AHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGI 333

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A  L   +  + +     + + + S  +      +G+Q+H   IKSGF+ + C+ NA++
Sbjct: 334 EAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVL 393

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            +Y +C  +  A+ +F+ M+ ++ +SW ++I    ++G     +  F +ML  G+KP+  
Sbjct: 394 DLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYDDTILHFNEMLRFGMKPDDF 453

Query: 592 TYIAVLSACS----------------HAGLISEGW--KHFRSMYDEHGIV---------- 623
           TY +VL AC+                 +GL S+ +       MY + GI+          
Sbjct: 454 TYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRI 513

Query: 624 --QRMEHYACMVDLLGRSGSLTEALEF---IRSMPLSADVLVWRTFLGACRVHGDTELGK 678
             Q++  +  ++     +    EA +F   +  M L  D   + T L  C      ELGK
Sbjct: 514 GGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGK 573

Query: 679 HAAEMILEQDP-QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
                I++Q+   D      L ++YA  G       + +++++R+ +
Sbjct: 574 QIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEKVEKRDFV 620



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 69/279 (24%), Positives = 133/279 (47%), Gaps = 13/279 (4%)

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M+     PN F    +L+       +  A +V+    +R    D    N++++ Y+ +G 
Sbjct: 43  MVVSGFVPNAFVSNCLLQMYARCAGAACARRVFDAMPRR----DTVSWNTMLTAYSHAGD 98

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +  A   F+ + + ++VS+N +V  Y +    +++ +L  E+   GV     TFA LL  
Sbjct: 99  ISTAVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKS 158

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            S++  +  G Q+HA  +K+G E +    +AL+ MY +C +++ A   F  M +RN +SW
Sbjct: 159 CSALEELSLGVQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMPERNWVSW 218

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
            + I G  ++    R LE+F +M   G+  +  +Y +   +C+    ++ G    R ++ 
Sbjct: 219 GAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFRSCAAMSCLNTG----RQLH- 273

Query: 619 EHGIVQRMEH----YACMVDLLGRSGSLTEALEFIRSMP 653
            H I  +          +VD+  ++ SLT+A      +P
Sbjct: 274 AHAIKNKFSSDRVVGTAIVDVYAKANSLTDARRAFFGLP 312


>gi|14165320|gb|AAK55452.1|AC069300_7 putative PPR repeat protein [Oryza sativa Japonica Group]
 gi|31433484|gb|AAP54989.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 905

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/737 (34%), Positives = 426/737 (57%), Gaps = 15/737 (2%)

Query: 54  LNDGRVQKAIF--TLDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           L  G  Q+ +F  ++DL   M ++G  PD  T+++LLKSC       LG  VH+L  ++ 
Sbjct: 162 LVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG 221

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           LE +    ++L+ +Y KC  L++A   F  M  +R+ VSW + I+  V   + V  + +F
Sbjct: 222 LEIDVRTGSALVDMYGKCRSLDDALCFFYGM-PERNWVSWGAAIAGCVQNEQYVRGLELF 280

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           +EM  LG   ++  +++  R+C+    +  G  ++   +K   F SD  VG A++D++ K
Sbjct: 281 IEMQRLGLGVSQPSYASAFRSCAAMSCLNTGRQLHAHAIK-NKFSSDRVVGTAIVDVYAK 339

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
            +  L  A + F  +          M+    + G   +A+ LF  MI S    D  +LSG
Sbjct: 340 AN-SLTDARRAFFGLPNHTVETSNAMMVGLVRAGLGIEAMGLFQFMIRSSIRFDVVSLSG 398

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V SAC+E + +  G+Q+H  AI++G  +D+CV  +++D+Y KC    ++ ++  +F  M 
Sbjct: 399 VFSACAETKGYFQGQQVHCLAIKSGFDVDICVNNAVLDLYGKCK---ALMEAYLIFQGMK 455

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             + +SW AII    Q+G  D + +  F++M++  + P+ FT+ SVLKAC  L       
Sbjct: 456 QKDSVSWNAIIAALEQNGHYD-DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGL 514

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+   +K G   D  V ++++ MY + G +++A+K  + +  + +VS+N ++  ++ N 
Sbjct: 515 MVHDKVIKSGLGSDAFVASTVVDMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNK 574

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
            SE+A +   E+ D G+    +TFA++L   +++  I  G+QIH +IIK     +  I +
Sbjct: 575 ESEEAQKFFSEMLDMGLKPDHFTFATVLDTCANLATIELGKQIHGQIIKQEMLDDEYISS 634

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            L+ MY++C ++  +  VF+++E R+ +SW +MI G+A HG    AL +F +M  + + P
Sbjct: 635 TLVDMYAKCGDMPDSLLVFEKVEKRDFVSWNAMICGYALHGLGVEALRMFERMQKENVVP 694

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N  T++AVL ACSH GL  +G ++F  M   + +  ++EH+ACMVD+LGRS    EA++F
Sbjct: 695 NHATFVAVLRACSHVGLFDDGCRYFHLMTTHYKLEPQLEHFACMVDILGRSKGPQEAVKF 754

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I SMP  AD ++W+T L  C++  D E+ + AA  +L  DP D + +ILLSN+YA +G W
Sbjct: 755 INSMPFQADAVIWKTLLSICKIRQDVEIAELAASNVLLLDPDDSSVYILLSNVYAESGKW 814

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             V+  R+ +K+  L KE GCSWIE  +++H F VG+ +HP++ E+Y  L+ L  ++K  
Sbjct: 815 ADVSRTRRLLKQGRLKKEPGCSWIEVQSEMHGFLVGDKAHPRSGELYEMLNDLIGEMKLS 874

Query: 769 GYLPDT-NFVLHELEEE 784
           GY PD+ +FV  E++EE
Sbjct: 875 GYEPDSASFV--EVDEE 889



 Score =  250 bits (638), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 152/573 (26%), Positives = 297/573 (51%), Gaps = 12/573 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++V  N++++ YS  GD++ A  +F  M +  D+VSW++++S Y  RG   +++ +FVEM
Sbjct: 124 DTVSWNTMLTAYSHAGDISTAVALFDGMPDP-DVVSWNALVSGYCQRGMFQESVDLFVEM 182

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+   F+ ++++CS  E +++G  ++   +K G  + DV  G AL+DM+ K   
Sbjct: 183 ARRGVSPDRTTFAVLLKSCSALEELSLGVQVHALAVKTG-LEIDVRTGSALVDMYGKCR- 240

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+ A   F  M E+N V W   I  C Q       + LF++M   G    + + +    
Sbjct: 241 SLDDALCFFYGMPERNWVSWGAAIAGCVQNEQYVRGLELFIEMQRLGLGVSQPSYASAFR 300

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +C+ +    +G+QLH+ AI+   + D  VG ++VD+YAK     S+ D+R+ F  + +H 
Sbjct: 301 SCAAMSCLNTGRQLHAHAIKNKFSSDRVVGTAIVDVYAKAN---SLTDARRAFFGLPNHT 357

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V +  A++ G V++ G   EA+ LF  MI+  +  +  + + V  AC         +QV+
Sbjct: 358 VETSNAMMVGLVRA-GLGIEAMGLFQFMIRSSIRFDVVSLSGVFSACAETKGYFQGQQVH 416

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             A+K G  +D CV N+++ +Y +   + +A   F+ + +K+ VS+N ++ A  +N + +
Sbjct: 417 CLAIKSGFDVDICVNNAVLDLYGKCKALMEAYLIFQGMKQKDSVSWNAIIAALEQNGHYD 476

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
                 +E+   G+    +T+ S+L   +++ ++  G  +H ++IKSG  S+  + + ++
Sbjct: 477 DTILHFNEMLRFGMKPDDFTYGSVLKACAALRSLEYGLMVHDKVIKSGLGSDAFVASTVV 536

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  ++ A ++   +  + V+SW ++++GF+ +  +  A + F +ML  G+KP+  
Sbjct: 537 DMYCKCGIIDEAQKLHDRIGGQQVVSWNAILSGFSLNKESEEAQKFFSEMLDMGLKPDHF 596

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+  VL  C++   I  G K       +  ++      + +VD+  + G + ++L     
Sbjct: 597 TFATVLDTCANLATIELG-KQIHGQIIKQEMLDDEYISSTLVDMYAKCGDMPDSLLVFEK 655

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           +    D + W   +    +HG   LG  A  M 
Sbjct: 656 VE-KRDFVSWNAMICGYALHG---LGVEALRMF 684



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 41/186 (22%), Positives = 80/186 (43%), Gaps = 33/186 (17%)

Query: 514 RIIKSGFESNHCIYNALISM-------------------------------YSRCANVEA 542
           R++ SGF     + N L+ M                               YS   ++  
Sbjct: 84  RMVVSGFVPTAFVSNCLLQMYARCAGAACARRVFDAMPRRDTVSWNTMLTAYSHAGDIST 143

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  +F  M D +V+SW ++++G+ + G    ++++F +M   G+ P+  T+  +L +CS 
Sbjct: 144 AVALFDGMPDPDVVSWNALVSGYCQRGMFQESVDLFVEMARRGVSPDRTTFAVLLKSCSA 203

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
              +S G     ++  + G+   +   + +VD+ G+  SL +AL F   MP   + + W 
Sbjct: 204 LEELSLG-VQVHALAVKTGLEIDVRTGSALVDMYGKCRSLDDALCFFYGMP-ERNWVSWG 261

Query: 663 TFLGAC 668
             +  C
Sbjct: 262 AAIAGC 267


>gi|449451892|ref|XP_004143694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like [Cucumis sativus]
          Length = 673

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/630 (38%), Positives = 369/630 (58%), Gaps = 5/630 (0%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+  A+K F +++E + + W  +I   TQ       IR+++DM +S   P+ FT   V+ 
Sbjct: 49  DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 108

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC    +   GKQ+H    + G   +V V  SLV MYAK    G +  +R VFD++ D  
Sbjct: 109 ACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKF---GQISYARIVFDKLHDRT 165

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT+II+GYVQ+G    EA+ +F +M Q  V P+     SV+ A  N+ D    + ++
Sbjct: 166 VVSWTSIISGYVQNGD-PMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 224

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
               K G   +  +  SL +MYA+ G +E AR  F  + + NL+ +N M+  YA N   E
Sbjct: 225 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 284

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A +L  E+    +   + T  S +  ++ +G++     +   I KS +  +  +   LI
Sbjct: 285 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 344

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C ++  A  VF  + D++V+ W+ MI G+  HG    A+ ++ +M   G+ PN  
Sbjct: 345 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 404

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+I +L+AC ++GL+ EGW+ F  M D HGI    +HY+C+VDLLGR+G L +A +FI S
Sbjct: 405 TFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 463

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+   V VW   L AC++H    LG+ AAE +   DP +   ++ LSNLYASA  W  V
Sbjct: 464 MPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRV 523

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           AN+R  M ++ L K+ G S IE +  +  F VG+ SHPK+ EI+ ELD+L  ++K  GY+
Sbjct: 524 ANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYV 583

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           P    VLH+L  E+  + L  HSE++AVA+G+IST+    +R+ KNLR C +CH+AIK I
Sbjct: 584 PHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLI 643

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S +  REI++RD+ RFHH KDG CSC D+W
Sbjct: 644 SKLVDREIIIRDAKRFHHFKDGVCSCGDFW 673



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 232/470 (49%), Gaps = 8/470 (1%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           V+  L  S L     ++   I+     GD+N A+K F+ + ++ DI+ W+++I  Y  + 
Sbjct: 21  VYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREV-SEPDILLWNAIIKGYTQKN 79

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
                I M+++M      PN + F  V++AC  T    IG  I+G   K G F S+V V 
Sbjct: 80  IVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYG-FGSNVFVQ 138

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            +L+ M+ K    +  A  VFDK+ ++  V WT +I+   Q G P +A+ +F +M     
Sbjct: 139 NSLVSMYAKFG-QISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNV 197

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            PD   L  V++A + +E    GK +H    + GL  +  +  SL  MYAK    G V+ 
Sbjct: 198 KPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAK---RGLVEV 254

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +R  F+RM   N++ W A+I+GY  + G  +EA+KLF +MI   +  +  T  S + A  
Sbjct: 255 ARFFFNRMEKPNLILWNAMISGYANN-GYGEEAIKLFREMITKNIRVDSITMRSAVLASA 313

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            +    +A  +  +  K     D  V   LI MYA+ G +  AR  F+ + +K++V ++ 
Sbjct: 314 QVGSLELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVVLWSV 373

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+  Y  + + ++A  L +E++  GV  +  TF  LL+   + G + +G ++   +   G
Sbjct: 374 MIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHG 433

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKH 568
            E +H  Y+ ++ +  R   +  A+     M  +  +S W ++++    H
Sbjct: 434 IEPHHQHYSCVVDLLGRAGYLNQAYDFIMSMPIKPGVSVWGALLSACKIH 483



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 176/327 (53%), Gaps = 9/327 (2%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           HP+  T+  +LK+C  +    +GK +H    +     N  + NSL+S+Y+K G ++ A  
Sbjct: 97  HPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARI 156

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F  + + R +VSW+S+IS YV  G  ++A+++F EM +    P+     +V+ A +N E
Sbjct: 157 VFDKL-HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVE 215

Query: 195 NVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
           ++  G  I+G + K G  F+ D+ +  +L  M+ K  + +E A   F++M + N + W  
Sbjct: 216 DLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGL-VEVARFFFNRMEKPNLILWNA 272

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           MI+     G   +AI+LF +MI      D  T+   V A +++      + L  +  ++ 
Sbjct: 273 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 332

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              D  V   L+DMYAKC   GS+  +R VFDR+ D +V+ W+ +I GY    G  +EA+
Sbjct: 333 YRDDTFVNTGLIDMYAKC---GSIYLARCVFDRVADKDVVLWSVMIMGYGLH-GHGQEAI 388

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGN 400
            L+++M Q  V PN  TF  +L AC N
Sbjct: 389 CLYNEMKQAGVCPNDGTFIGLLTACKN 415



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 161/351 (45%), Gaps = 34/351 (9%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +QVY   +  G      +    I+     G +  A KAF  + E +++ +N ++  Y + 
Sbjct: 19  DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 78

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              +    +  +++ + V  + +TF  +L         G G+QIH +  K GF SN  + 
Sbjct: 79  NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 138

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           N+L+SMY++   +  A  VF ++ DR V+SWTS+I+G+ ++G    AL +F +M    +K
Sbjct: 139 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 198

Query: 588 PNGITYIAVLSACSHA----------GLISEGWKHFR--------SMYDEHGIVQ----- 624
           P+ I  ++V++A ++           GL+++    F         +MY + G+V+     
Sbjct: 199 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 258

Query: 625 --RMEH-----YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDT 674
             RME      +  M+     +G   EA++  R M    +  D +  R+ + A    G  
Sbjct: 259 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 318

Query: 675 ELGKHAAEMILEQDPQDPA-AHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           EL +     I + + +D    +  L ++YA  G       +  R+ +++++
Sbjct: 319 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 369



 Score =  100 bits (248), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 5/254 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G   +A+     M Q    PD      ++ +     +   GK +H L+T+  LE  
Sbjct: 176 YVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFE 235

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+ SL ++Y+K G L E  + F +   K +++ W++MIS Y N G   +AI +F EM+
Sbjct: 236 PDIVISLTTMYAKRG-LVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI 294

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
                 +     + + A +   ++ +   + G++ K  Y D D  V   LIDM+ K GS+
Sbjct: 295 TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRD-DTFVNTGLIDMYAKCGSI 353

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A  VFD++ +K+ V W++MI      G  ++AI L+ +M  +G  P+  T  G+++
Sbjct: 354 YL--ARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 411

Query: 292 ACSELELFTSGKQL 305
           AC    L   G +L
Sbjct: 412 ACKNSGLVKEGWEL 425



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 4/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G  ++AI     M  K    D  T    + +  +  +  L + +   +++S+   ++ 
Sbjct: 279 NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF 338

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +   LI +Y+KCG +  A  +F  + +K D+V WS MI  Y   G   +AI ++ EM + 
Sbjct: 339 VNTGLIDMYAKCGSIYLARCVFDRVADK-DVVLWSVMIMGYGLHGHGQEAICLYNEMKQA 397

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G CPN+  F  ++ AC N+  V  G  ++  +   G         C ++D+  +    L 
Sbjct: 398 GVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSC-VVDLLGRAGY-LN 455

Query: 235 SAYKVFDKMTEKNTVG-WTLMITRC 258
            AY     M  K  V  W  +++ C
Sbjct: 456 QAYDFIMSMPIKPGVSVWGALLSAC 480


>gi|449433141|ref|XP_004134356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  463 bits (1192), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 237/635 (37%), Positives = 379/635 (59%), Gaps = 6/635 (0%)

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLS 287
           GS+ +  AY VF    E + + W  M+        PR A++ + +M+  S  +PDRFT  
Sbjct: 24  GSLGVGYAYSVFAHTRELDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFP 83

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            ++  C+ L  F  GK LH   ++  L  D+ +  +L++MYA C   G +  +R +F+RM
Sbjct: 84  SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC---GDLKSARFLFERM 140

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              N + WT++I+GY+++   + EA+ L+  M +   +P+  T A+++ AC  L D  V 
Sbjct: 141 GHRNKVVWTSMISGYMKNHCPN-EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVG 199

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            ++++H  +    +   +G++L++MYA+ G ++ AR+ F+ L +K++ +++ ++  Y KN
Sbjct: 200 MKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDKLSDKDVYAWSALIFGYVKN 259

Query: 468 LNSEKAFELLHEIED-TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             S +A +L  E+   + +  +  T  +++S  + +G +  G  +H  I ++    +  +
Sbjct: 260 NRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSL 319

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            N+LI M+S+C +++AA ++F  M  +++ISW SM+ GFA HG    AL  F  M    +
Sbjct: 320 NNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDL 379

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ IT+I VL+ACSHAGL+ EG K F  +   +G+  + EHY CMVDLL R+G L EA 
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAR 439

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           EFIR MPL  D  +W + LGACRV+ + ELG+ AA  +L+ +P +   +ILLSN+YA   
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARFLLKLEPTNDGVYILLSNIYAKRK 499

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W  V  +R+ M E+ + K  GCS +  DN  H F  G+ SHP+  EI   L Q+  K+K
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLK 559

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             GY+ DT+ VL  +++ +K + + QHSEK+A+ +GL+ +     I + KNLRVC DCHT
Sbjct: 560 LAGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHT 619

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IK +S +  R+I LRD NRFHH KDG CSC DYW
Sbjct: 620 LIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 212/374 (56%), Gaps = 8/374 (2%)

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF-CPNEYCFSAVIRACSNTENVAIGHII 202
           D+++W+SM+ ++VN      A+  + EMLE     P+ + F ++++ C+      +G ++
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +G ++K     SD+ +   L++M+     DL+SA  +F++M  +N V WT MI+   +  
Sbjct: 102 HGQVVKY-MLHSDLYIETTLLNMYAACG-DLKSARFLFERMGHRNKVVWTSMISGYMKNH 159

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           CP +A+ L+  M   GF PD  T++ +VSAC+EL+    G +LHS      + +   +G 
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGS 219

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +LV+MYAKC   G +  +R+VFD++ D +V +W+A+I GYV++  R  EA++LF ++  G
Sbjct: 220 ALVNMYAKC---GDLKTARQVFDKLSDKDVYAWSALIFGYVKN-NRSTEALQLFREVAGG 275

Query: 383 -QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + PN  T  +V+ AC  L D      V+ +  +  +     + NSLI M+++ G ++ 
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDA 335

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A++ F+S+  K+L+S+N+MV+ +A +    +A      ++ T +     TF  +L+  S 
Sbjct: 336 AKRIFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSH 395

Query: 502 IGAIGKGEQIHARI 515
            G + +G+++   I
Sbjct: 396 AGLVQEGKKLFYEI 409



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/336 (30%), Positives = 191/336 (56%), Gaps = 14/336 (4%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           +++ +  N PD  T+  LLK C     F +GK++H  + +  L  +  I  +L+++Y+ C
Sbjct: 68  EMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC 127

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           GDL  A  +F+ MG++  +V W+SMIS Y+      +A+ ++ +M E GF P+E   + +
Sbjct: 128 GDLKSARFLFERMGHRNKVV-WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATL 186

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVKGSVDLESAYKVFDKMT 244
           + AC+  +++ +G  ++  + +    D  +C  +G AL++M+ K   DL++A +VFDK++
Sbjct: 187 VSACAELKDLGVGMKLHSHIRE---MDMKICAVLGSALVNMYAKCG-DLKTARQVFDKLS 242

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGK 303
           +K+   W+ +I    +     +A++LF ++   S   P+  T+  V+SAC++L    +G+
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            +H +  RT     V +  SL+DM++KC   G +D ++++FD M   +++SW +++ G+ 
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKC---GDIDAAKRIFDSMSYKDLISWNSMVNGFA 359

Query: 364 QSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             G GR  EA+  F  M    + P+  TF  VL AC
Sbjct: 360 LHGLGR--EALAQFRLMQTTDLQPDEITFIGVLTAC 393



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 4/247 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            +A+     M + G  PD  T + L+ +C   ++  +G  +HS +    ++  +V+ ++L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCP 178
           +++Y+KCGDL  A ++F  + +K D+ +WS++I  YV   +  +A+ +F E+       P
Sbjct: 222 VNMYAKCGDLKTARQVFDKLSDK-DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           NE    AVI AC+   ++  G  ++ ++ +     S V +  +LIDMF K   D+++A +
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS-VSLNNSLIDMFSKCG-DIDAAKR 338

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FD M+ K+ + W  M+      G  R+A+  F  M  +   PD  T  GV++ACS   L
Sbjct: 339 IFDSMSYKDLISWNSMVNGFALHGLGREALAQFRLMQTTDLQPDEITFIGVLTACSHAGL 398

Query: 299 FTSGKQL 305
              GK+L
Sbjct: 399 VQEGKKL 405


>gi|297817672|ref|XP_002876719.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297322557|gb|EFH52978.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1005

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 252/751 (33%), Positives = 431/751 (57%), Gaps = 10/751 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G    A+F    M  +G   DL ++ +LLK+C + R+   G  +H +L +      
Sbjct: 137 YVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNST 196

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+N+L+S+Y+K   L+ A ++F +   K D V W+S++SSY   GK ++ + +F EM 
Sbjct: 197 GFIVNALVSMYAKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQ 256

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSV 231
             G   N Y   + + AC       +G  I+  +LK  + F+  VC   ALI M+ +   
Sbjct: 257 MTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCN--ALIAMYARCGK 314

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            LE+  ++   M   + V W  +I    Q    ++A++ F DMI +G  PD  +L+ V++
Sbjct: 315 MLEAG-RILRLMNNADVVTWNSLIKGYVQNLMYKEALQFFCDMIAAGHKPDEVSLTSVIA 373

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A   L    +G +LH++ I+ G   ++ VG +L+DMY+KC +   +    + F  M + +
Sbjct: 374 ASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMG---RAFLMMHEKD 430

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SWT II GY  +     EA++LF D+ + ++  +     S+L+AC  L    + ++++
Sbjct: 431 LISWTTIIAGYALNDCH-VEALQLFRDVAKKRMEIDEMMLGSILRACSVLKSMLIVKEIH 489

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            H +++G  +D  + N L+ +Y +   M  A + FES+  K++VS+ +M+ + A N N  
Sbjct: 490 CHILRKG-LIDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMISSSALNGNEN 548

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A EL   + +TG+   +     +LS A+S+ A+ KG +IH  +++ GF     I  A++
Sbjct: 549 EAVELFRRMAETGLLADSVALLCILSAAASLSALKKGREIHGYLLRKGFCLEGSIAVAVV 608

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY+ C ++++A  VF  +E + ++ +TSMI  +  HG    ++E+F KM  + + P+ I
Sbjct: 609 DMYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKASVELFNKMRHENVSPDHI 668

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           +++A+L ACSHAGL+ EG +  + M  E+ +    EHY C+VD+LGR+  + EA EF++ 
Sbjct: 669 SFLALLYACSHAGLLDEGRRFLKIMELEYKLEPWPEHYVCLVDMLGRANCVVEAFEFVKM 728

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M       VW   L ACR H + E+G+ AA+ +LE +P++P   +L+SN++A  G W  V
Sbjct: 729 MKTEPTTEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDV 788

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGY 770
             +R +MK   + K  GCSWIE D KVHKF   + SHP+T EIY +L ++  K+ +E GY
Sbjct: 789 EKVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPETKEIYEKLSEVTRKLERESGY 848

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
           L DT F+LH ++E +KVQ L  HSE++A+A+
Sbjct: 849 LADTKFILHNVDEGEKVQMLHGHSERLAIAY 879



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 145/573 (25%), Positives = 282/573 (49%), Gaps = 52/573 (9%)

Query: 25  RQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLL 84
           R  L    + P I +P    P  N   +   DG + +A   LD+    GN+  ++ Y+ L
Sbjct: 51  RPKLSRIQTNPSIGKPVQV-PSPNLASF---DGGLNEAFQRLDV---NGNNSPIEAYAYL 103

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L+ C +SR                                         K+F  M + R 
Sbjct: 104 LELCGKSRAL------------------------------------SQEKVFDEMRD-RT 126

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
             +W+++I +YV+ G+   A+ ++  M   G   + Y F  +++AC    ++  G  ++ 
Sbjct: 127 AFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHC 186

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK-NTVGWTLMITRCTQLGC 263
            L+K G F+S   +  AL+ M+ K +  L +A ++FD   EK + V W  +++  +  G 
Sbjct: 187 MLVKLG-FNSTGFIVNALVSMYAK-TDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGK 244

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             + ++LF +M ++G   + +T+   ++AC        GK++H+  +++  + +V V  +
Sbjct: 245 SLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAAVLKSTHSFEVYVCNA 304

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+ MYA+C   G + ++ ++   M + +V++W ++I GYVQ+    KEA++ F DMI   
Sbjct: 305 LIAMYARC---GKMLEAGRILRLMNNADVVTWNSLIKGYVQN-LMYKEALQFFCDMIAAG 360

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
             P+  +  SV+ A G L +     +++ + +K G   +  VGN+LI MY++        
Sbjct: 361 HKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDMYSKCNLTCYMG 420

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           +AF  + EK+L+S+ T++  YA N    +A +L  ++    +        S+L   S + 
Sbjct: 421 RAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMMLGSILRACSVLK 480

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           ++   ++IH  I++ G   +  I N L+ +Y +C N+  A +VF+ ++ ++V+SWTSMI+
Sbjct: 481 SMLIVKEIHCHILRKGL-IDTVIQNELVDVYGKCRNMGYASRVFESIKGKDVVSWTSMIS 539

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
             A +G    A+E+F +M   G+  + +  + +
Sbjct: 540 SSALNGNENEAVELFRRMAETGLLADSVALLCI 572



 Score =  168 bits (426), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 116/461 (25%), Positives = 229/461 (49%), Gaps = 16/461 (3%)

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           S  KVFD+M ++    W  +I      G P  A+ ++ +M + G   D ++   ++ AC 
Sbjct: 114 SQEKVFDEMRDRTAFAWNALIGAYVSNGEPASALFIYRNMRVEGVPLDLYSFPVLLKACG 173

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVM 353
           +L    SG +LH   ++ G      +  +LV MYAK      +  ++++FD   +  + +
Sbjct: 174 KLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMYAK---TDHLSAAKRLFDASQEKGDAV 230

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
            W +I++ Y  S G+  E ++LF +M     A N +T  S L AC     + + ++++  
Sbjct: 231 LWNSILSSYSTS-GKSLETLQLFREMQMTGPASNSYTIVSALTACEGFSYAKLGKEIHAA 289

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K   + +  V N+LI+MYAR G+M +A +    +   ++V++N+++  Y +NL  ++A
Sbjct: 290 VLKSTHSFEVYVCNALIAMYARCGKMLEAGRILRLMNNADVVTWNSLIKGYVQNLMYKEA 349

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
            +   ++   G      +  S+++ +  +  +  G ++HA +IK G++SN  + N LI M
Sbjct: 350 LQFFCDMIAAGHKPDEVSLTSVIAASGRLSNLLAGMELHAYVIKHGWDSNLLVGNTLIDM 409

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           YS+C       + F  M ++++ISWT++I G+A +     AL++F  +    ++ + +  
Sbjct: 410 YSKCNLTCYMGRAFLMMHEKDLISWTTIIAGYALNDCHVEALQLFRDVAKKRMEIDEMML 469

Query: 594 IAVLSACS--HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
            ++L ACS   + LI    K         G++  +     +VD+ G+  ++  A     S
Sbjct: 470 GSILRACSVLKSMLIV---KEIHCHILRKGLIDTVIQNE-LVDVYGKCRNMGYASRVFES 525

Query: 652 MPLSADVLVWRTFLGACRVHGD----TELGKHAAEMILEQD 688
           +    DV+ W + + +  ++G+     EL +  AE  L  D
Sbjct: 526 IK-GKDVVSWTSMISSSALNGNENEAVELFRRMAETGLLAD 565



 Score = 99.4 bits (246), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 121/258 (46%), Gaps = 21/258 (8%)

Query: 421 LDDCVGNSLISMYAR------SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           LD    NS I  YA         R     K F+ + ++   ++N ++ AY  N     A 
Sbjct: 88  LDVNGNNSPIEAYAYLLELCGKSRALSQEKVFDEMRDRTAFAWNALIGAYVSNGEPASAL 147

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            +   +   GV    Y+F  LL     +  I  G ++H  ++K GF S   I NAL+SMY
Sbjct: 148 FIYRNMRVEGVPLDLYSFPVLLKACGKLRDIRSGTELHCMLVKLGFNSTGFIVNALVSMY 207

Query: 535 SRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           ++  ++ AA ++F   +++ + + W S+++ ++  G +   L++F +M   G   N  T 
Sbjct: 208 AKTDHLSAAKRLFDASQEKGDAVLWNSILSSYSTSGKSLETLQLFREMQMTGPASNSYTI 267

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH----YAC--MVDLLGRSGSLTEALE 647
           ++ L+AC       EG+ + +   + H  V +  H    Y C  ++ +  R G + EA  
Sbjct: 268 VSALTAC-------EGFSYAKLGKEIHAAVLKSTHSFEVYVCNALIAMYARCGKMLEAGR 320

Query: 648 FIRSMPLSADVLVWRTFL 665
            +R M  +ADV+ W + +
Sbjct: 321 ILRLMN-NADVVTWNSLI 337


>gi|449491161|ref|XP_004158817.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At3g15930-like [Cucumis
           sativus]
          Length = 744

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/662 (36%), Positives = 373/662 (56%), Gaps = 37/662 (5%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D + A ++FD++ E N   W  MI   ++L  P+  + L+L+M+  G  PDR+T   +  
Sbjct: 88  DFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 147

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
             +       G+QLH   ++ GL  +V V  +LV MY  C   G +D +R VFD     +
Sbjct: 148 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC---GQLDTARGVFDVCPKAD 204

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V++W  II+ Y    G+ +E+ +LF  M   QV P   T   VL AC  L D    ++V+
Sbjct: 205 VITWNMIISAY-NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 263

Query: 412 THAVKRGRALDDCV-GNSLISMYARSGRMEDA---------------------------- 442
           ++ VK  +   + V  N++I MYA  G M+ A                            
Sbjct: 264 SY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEI 322

Query: 443 ---RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
              R  F+ + EK+ VS+  M+D Y ++   ++A EL   ++ T V    +T  S+L+  
Sbjct: 323 DVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTAC 382

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           + +GA+  GE I   I ++  +++  + NALI MY +C +V+ A  +F+EM  R+  +WT
Sbjct: 383 AHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWT 442

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G A +G   +AL++F  ML   I P+ ITYI VLSAC+H GL+ +G K+F  M  +
Sbjct: 443 AMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQ 502

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           HGI   + HY C+VDLL R+G L EA E I +MP+ A+ +VW   L  CRV+ ++++ + 
Sbjct: 503 HGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEM 562

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
             + ILE +P + A ++LL N+YA+   W  +  +R+ M ++ + K  GCS IE + +VH
Sbjct: 563 VVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKXPGCSLIEMNGRVH 622

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F  G+ SHP+T  I A+LD++   +K  GY PD + V  ++ EE K   +F+HSEK+A+
Sbjct: 623 EFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAI 682

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLI++     IR+ KNLR+C DCH   K +S V  RE+++RD  RFHH K G CSC D
Sbjct: 683 AFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKD 742

Query: 860 YW 861
           YW
Sbjct: 743 YW 744



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 264/558 (47%), Gaps = 44/558 (7%)

Query: 100 VHSLLTRSKLEPNSVILNSLISL--YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           VH    +  L  N V+ N +++     + GD   A ++F  +    ++  W++MI  Y  
Sbjct: 58  VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEP-NLFIWNTMIRGYSR 116

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                  + +++EML  G  P+ Y F  + +  +    +  G  ++G +LK G    +V 
Sbjct: 117 LDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG-LQYNVF 175

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V  AL+ M++     L++A  VFD   + + + W ++I+   ++G   ++ RLFL M   
Sbjct: 176 VHTALVQMYLLCG-QLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK 234

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC------ 331
             LP   TL  V+SACS+L+   +GK++HS+     +  ++ +  +++DMYA C      
Sbjct: 235 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 294

Query: 332 ----------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
                                 T  G +D +R  FD+M + + +SWTA+I GY++S  R 
Sbjct: 295 LGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS-NRF 353

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           KEA++LF +M    V P+ FT  SVL AC +L    + E + T+  +     D  V N+L
Sbjct: 354 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 413

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MY + G ++ A   F  + +++  ++  M+   A N + EKA ++   +    +    
Sbjct: 414 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 473

Query: 490 YTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            T+  +LS  +  G + KG +   R+  + G E N   Y  L+ + +R   ++ A++V +
Sbjct: 474 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 533

Query: 549 EMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA---VLSACSHAG 604
            M  + N I W +++ G   +  +  A E+  K + +    NG  Y+    + +AC    
Sbjct: 534 NMPIKANSIVWGALLAGCRVYRESDMA-EMVVKQILELEPDNGAVYVLLCNIYAACKRWN 592

Query: 605 LISEGWKHFRSMYDEHGI 622
            + E     R M  + GI
Sbjct: 593 DLRE----LRQMMMDKGI 606



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 235/519 (45%), Gaps = 74/519 (14%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  PD  T+  L K   R      G+ +H  + +  L+ N  +  +L+ +Y  CG 
Sbjct: 130 MLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ 189

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+ A  +F  +  K D+++W+ +IS+Y   GK  ++  +F+ M +    P       V+ 
Sbjct: 190 LDTARGVF-DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLS 248

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-------------------- 228
           ACS  +++  G  ++ ++  C   +S++ +  A+IDM+                      
Sbjct: 249 ACSKLKDLRTGKKVHSYVKNCK-VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII 307

Query: 229 ------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
                       G +D+   Y  FDKM EK+ V WT MI    +    ++A+ LF +M  
Sbjct: 308 SWTTIVSGFTNLGEIDVARNY--FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 365

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +   PD FT+  V++AC+ L     G+ + ++  R  +  D+ V  +L+DMY KC   G 
Sbjct: 366 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKC---GD 422

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           VD +  +F  M   +  +WTA+I G   +G  +K A+ +FS+M++  + P+  T+  VL 
Sbjct: 423 VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK-ALDMFSNMLKASILPDEITYIGVLS 481

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC            +T  V +GR          + M ++ G             E N+  
Sbjct: 482 AC-----------THTGLVDKGRKY-------FLRMTSQHG------------IEPNIAH 511

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           Y  +VD  A+    ++A+E+   IE+  +  ++  + +LL+G          E +  +I+
Sbjct: 512 YGCLVDLLARAGRLKEAYEV---IENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL 568

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           +     N  +Y  L ++Y+ C       ++ + M D+ +
Sbjct: 569 ELE-PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGI 606



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 192/433 (44%), Gaps = 80/433 (18%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ +++     +M  K   P   T  L+L +C + ++   GK VHS +   K+E N V+ 
Sbjct: 219 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 278

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNK------------------------------RDIV 146
           N++I +Y+ CG+++ A  IF+SM N+                              +D V
Sbjct: 279 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 338

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW++MI  Y+   +  +A+ +F  M      P+E+   +V+ AC++   + +G  I  ++
Sbjct: 339 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 398

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
            +     +D+ V  ALIDM+ K   D++ A  +F +M++++   WT MI      G    
Sbjct: 399 DR-NKIKNDLFVRNALIDMYFKCG-DVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 456

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+ +F +M+ +  LPD  T  GV+SAC+                 TGL            
Sbjct: 457 ALDMFSNMLKASILPDEITYIGVLSACTH----------------TGL------------ 488

Query: 327 MYAKCTVDGSVDDSRKVFDRM-----LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
                     VD  RK F RM     ++ N+  +  ++   +   GR KEA ++  +M  
Sbjct: 489 ----------VDKGRKYFLRMTSQHGIEPNIAHYGCLV-DLLARAGRLKEAYEVIENM-- 535

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             +  N   + ++L  C    +S++AE V    ++     +  V   L ++YA   R  D
Sbjct: 536 -PIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL-EPDNGAVYVLLCNIYAACKRWND 593

Query: 442 ARKAFESLFEKNL 454
            R+  + + +K +
Sbjct: 594 LRELRQMMMDKGI 606



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 142/306 (46%), Gaps = 7/306 (2%)

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA--RSGRMEDA 442
           +P      S+L+ C ++   +  +QV+  A+K+G   +  + N +++       G  + A
Sbjct: 36  SPPTHPLISLLETCESM---DQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYA 92

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R+ F+ + E NL  +NTM+  Y++    +    L  E+   GV    YTF  L  G +  
Sbjct: 93  RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 152

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            A+  G Q+H  ++K G + N  ++ AL+ MY  C  ++ A  VF      +VI+W  +I
Sbjct: 153 IALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 212

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           + + K G    +  +F  M    + P  +T + VLSACS    +  G K   S      +
Sbjct: 213 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNCKV 271

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +     M+D+    G +  AL   RSM  + D++ W T +      G+ ++ ++  +
Sbjct: 272 ESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEIDVARNYFD 330

Query: 683 MILEQD 688
            + E+D
Sbjct: 331 KMPEKD 336



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 14/283 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++   R ++A+     M      PD  T   +L +C       LG+ + + + R+K++ +
Sbjct: 347 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND 406

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+LI +Y KCGD+++A  IF+ M ++RD  +W++MI      G    A+ MF  ML
Sbjct: 407 LFVRNALIDMYFKCGDVDKAESIFREM-SQRDKFTWTAMIVGLAVNGHGEKALDMFSNML 465

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +    P+E  +  V+ AC++T  V  G   +  +      + ++     L+D+  +    
Sbjct: 466 KASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG-R 524

Query: 233 LESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR----FTLS 287
           L+ AY+V + M  K N++ W  ++  C ++    D   + +  IL    PD       L 
Sbjct: 525 LKEAYEVIENMPIKANSIVWGALLAGC-RVYRESDMAEMVVKQILE-LEPDNGAVYVLLC 582

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
            + +AC     +   ++L    +  G+      GCSL++M  +
Sbjct: 583 NIYAACKR---WNDLRELRQMMMDKGIKKX--PGCSLIEMNGR 620


>gi|449528002|ref|XP_004170996.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g12770-like, partial [Cucumis sativus]
          Length = 658

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 243/630 (38%), Positives = 369/630 (58%), Gaps = 5/630 (0%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+  A+K F +++E + + W  +I   TQ       IR+++DM +S   P+ FT   V+ 
Sbjct: 34  DVNYAHKAFREVSEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYVLK 93

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC    +   GKQ+H    + G   +V V  SLV MYAK    G +  +R VFD++ D  
Sbjct: 94  ACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKF---GQISYARIVFDKLHDRT 150

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT+II+GYVQ+G    EA+ +F +M Q  V P+     SV+ A  N+ D    + ++
Sbjct: 151 VVSWTSIISGYVQNGD-PMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 209

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
               K G   +  +  SL +MYA+ G +E AR  F  + + NL+ +N M+  YA N   E
Sbjct: 210 GLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFFFNRMEKPNLILWNAMISGYANNGYGE 269

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A +L  E+    +   + T  S +  ++ +G++     +   I KS +  +  +   LI
Sbjct: 270 EAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVNTGLI 329

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C ++  A  VF  + D++V+ W+ MI G+  HG    A+ ++ +M   G+ PN  
Sbjct: 330 DMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDG 389

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+I +L+AC ++GL+ EGW+ F  M D HGI    +HY+C+VDLLGR+G L +A +FI S
Sbjct: 390 TFIGLLTACKNSGLVKEGWELFHLMPD-HGIEPHHQHYSCVVDLLGRAGYLNQAYDFIMS 448

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+   V VW   L AC++H    LG+ AAE +   DP +   ++ LSNLYASA  W  V
Sbjct: 449 MPIKPGVSVWGALLSACKIHRKVRLGEIAAEQLFILDPYNTGHYVQLSNLYASAHLWTRV 508

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           AN+R  M ++ L K+ G S IE +  +  F VG+ SHPK+ EI+ ELD+L  ++K  GY+
Sbjct: 509 ANVRLMMTQKGLNKDLGHSSIEINGNLETFQVGDRSHPKSKEIFEELDRLEKRLKAAGYV 568

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           P    VLH+L  E+  + L  HSE++AVA+G+IST+    +R+ KNLR C +CH+AIK I
Sbjct: 569 PHMESVLHDLNHEEIEETLCHHSERLAVAYGIISTAPGTTLRITKNLRACINCHSAIKLI 628

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S +  REI++RD+ RFHH KDG CSC D+W
Sbjct: 629 SKLVDREIIIRDAKRFHHFKDGVCSCGDFW 658



 Score =  186 bits (473), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 223/443 (50%), Gaps = 8/443 (1%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           GD+N A+K F+ + ++ DI+ W+++I  Y  +      I M+++M      PN + F  V
Sbjct: 33  GDVNYAHKAFREV-SEPDILLWNAIIKGYTQKNIVDAPIRMYMDMQISQVHPNCFTFLYV 91

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++AC  T    IG  I+G   K G F S+V V  +L+ M+ K    +  A  VFDK+ ++
Sbjct: 92  LKACGGTSVEGIGKQIHGQTFKYG-FGSNVFVQNSLVSMYAKFG-QISYARIVFDKLHDR 149

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
             V WT +I+   Q G P +A+ +F +M      PD   L  V++A + +E    GK +H
Sbjct: 150 TVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIH 209

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
               + GL  +  +  SL  MYAK    G V+ +R  F+RM   N++ W A+I+GY  + 
Sbjct: 210 GLVTKLGLEFEPDIVISLTTMYAK---RGLVEVARFFFNRMEKPNLILWNAMISGYANN- 265

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           G  +EA+KLF +MI   +  +  T  S + A   +    +A  +  +  K     D  V 
Sbjct: 266 GYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTFVN 325

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
             LI MYA+ G +  AR  F+ + +K++V ++ M+  Y  + + ++A  L +E++  GV 
Sbjct: 326 TGLIDMYAKCGSIYLARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVC 385

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            +  TF  LL+   + G + +G ++   +   G E +H  Y+ ++ +  R   +  A+  
Sbjct: 386 PNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSCVVDLLGRAGYLNQAYDF 445

Query: 547 FKEMEDRNVIS-WTSMITGFAKH 568
              M  +  +S W ++++    H
Sbjct: 446 IMSMPIKPGVSVWGALLSACKIH 468



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/327 (32%), Positives = 176/327 (53%), Gaps = 9/327 (2%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           HP+  T+  +LK+C  +    +GK +H    +     N  + NSL+S+Y+K G ++ A  
Sbjct: 82  HPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQNSLVSMYAKFGQISYARI 141

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F  + + R +VSW+S+IS YV  G  ++A+++F EM +    P+     +V+ A +N E
Sbjct: 142 VFDKL-HDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVE 200

Query: 195 NVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
           ++  G  I+G + K G  F+ D+ +  +L  M+ K  + +E A   F++M + N + W  
Sbjct: 201 DLGQGKSIHGLVTKLGLEFEPDIVI--SLTTMYAKRGL-VEVARFFFNRMEKPNLILWNA 257

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           MI+     G   +AI+LF +MI      D  T+   V A +++      + L  +  ++ 
Sbjct: 258 MISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSE 317

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              D  V   L+DMYAKC   GS+  +R VFDR+ D +V+ W+ +I GY    G  +EA+
Sbjct: 318 YRDDTFVNTGLIDMYAKC---GSIYLARCVFDRVADKDVVLWSVMIMGYGLH-GHGQEAI 373

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGN 400
            L+++M Q  V PN  TF  +L AC N
Sbjct: 374 CLYNEMKQAGVCPNDGTFIGLLTACKN 400



 Score =  106 bits (265), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 83/351 (23%), Positives = 161/351 (45%), Gaps = 34/351 (9%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +QVY   +  G      +    I+     G +  A KAF  + E +++ +N ++  Y + 
Sbjct: 4   DQVYVQLIVSGLHKCRFLMIKFINACLHFGDVNYAHKAFREVSEPDILLWNAIIKGYTQK 63

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              +    +  +++ + V  + +TF  +L         G G+QIH +  K GF SN  + 
Sbjct: 64  NIVDAPIRMYMDMQISQVHPNCFTFLYVLKACGGTSVEGIGKQIHGQTFKYGFGSNVFVQ 123

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           N+L+SMY++   +  A  VF ++ DR V+SWTS+I+G+ ++G    AL +F +M    +K
Sbjct: 124 NSLVSMYAKFGQISYARIVFDKLHDRTVVSWTSIISGYVQNGDPMEALNVFKEMRQCNVK 183

Query: 588 PNGITYIAVLSACSHA----------GLISEGWKHFR--------SMYDEHGIVQ----- 624
           P+ I  ++V++A ++           GL+++    F         +MY + G+V+     
Sbjct: 184 PDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFEPDIVISLTTMYAKRGLVEVARFF 243

Query: 625 --RMEH-----YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDT 674
             RME      +  M+     +G   EA++  R M    +  D +  R+ + A    G  
Sbjct: 244 FNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSL 303

Query: 675 ELGKHAAEMILEQDPQDPA-AHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           EL +     I + + +D    +  L ++YA  G       +  R+ +++++
Sbjct: 304 ELARWLDGYISKSEYRDDTFVNTGLIDMYAKCGSIYLARCVFDRVADKDVV 354



 Score =  100 bits (248), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/254 (28%), Positives = 127/254 (50%), Gaps = 5/254 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G   +A+     M Q    PD      ++ +     +   GK +H L+T+  LE  
Sbjct: 161 YVQNGDPMEALNVFKEMRQCNVKPDWIALVSVMTAYTNVEDLGQGKSIHGLVTKLGLEFE 220

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+ SL ++Y+K G L E  + F +   K +++ W++MIS Y N G   +AI +F EM+
Sbjct: 221 PDIVISLTTMYAKRG-LVEVARFFFNRMEKPNLILWNAMISGYANNGYGEEAIKLFREMI 279

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
                 +     + + A +   ++ +   + G++ K  Y D D  V   LIDM+ K GS+
Sbjct: 280 TKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRD-DTFVNTGLIDMYAKCGSI 338

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A  VFD++ +K+ V W++MI      G  ++AI L+ +M  +G  P+  T  G+++
Sbjct: 339 YL--ARCVFDRVADKDVVLWSVMIMGYGLHGHGQEAICLYNEMKQAGVCPNDGTFIGLLT 396

Query: 292 ACSELELFTSGKQL 305
           AC    L   G +L
Sbjct: 397 ACKNSGLVKEGWEL 410



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 93/205 (45%), Gaps = 4/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+G  ++AI     M  K    D  T    + +  +  +  L + +   +++S+   ++ 
Sbjct: 264 NNGYGEEAIKLFREMITKNIRVDSITMRSAVLASAQVGSLELARWLDGYISKSEYRDDTF 323

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +   LI +Y+KCG +  A  +F  + +K D+V WS MI  Y   G   +AI ++ EM + 
Sbjct: 324 VNTGLIDMYAKCGSIYLARCVFDRVADK-DVVLWSVMIMGYGLHGHGQEAICLYNEMKQA 382

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G CPN+  F  ++ AC N+  V  G  ++  +   G         C ++D+  +    L 
Sbjct: 383 GVCPNDGTFIGLLTACKNSGLVKEGWELFHLMPDHGIEPHHQHYSC-VVDLLGRAGY-LN 440

Query: 235 SAYKVFDKMTEKNTVG-WTLMITRC 258
            AY     M  K  V  W  +++ C
Sbjct: 441 QAYDFIMSMPIKPGVSVWGALLSAC 465


>gi|413952892|gb|AFW85541.1| hypothetical protein ZEAMMB73_780855 [Zea mays]
          Length = 787

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 251/670 (37%), Positives = 387/670 (57%), Gaps = 14/670 (2%)

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           + A    ++G  +  GY  +D  V  AL  ++ K S   + A KVFD +   +T+ W  +
Sbjct: 129 DAAAARTLHGLSVAAGY-AADTFVASALAKLYFKLSRG-DDARKVFDTVPSPDTILWNTL 186

Query: 255 ITRCTQLGCP-RDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
           +      G P  +A+  F+ M+ +G + PD  TL+  + A +E      G+ +H + ++ 
Sbjct: 187 LA-----GLPGSEALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVKC 241

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           GLA    V   L+ +Y+KC   G +D ++ +FDRM + +++++ A+I+GY    G  + +
Sbjct: 242 GLAEHEHVVTGLMSLYSKC---GDMDSAQFLFDRMDNPDLVAYNALISGY-SVNGMVESS 297

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           V+LF ++      PN  T  +V+          +A  ++   VK     D  V  +L ++
Sbjct: 298 VELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTL 357

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y R   ME AR  F+++ EK + S+N M+  YA+N  +E A  L   +++  V  +  T 
Sbjct: 358 YCRLNDMESARSIFDAMLEKTMESWNAMISGYAQNGLTEMAVALFQLMQELNVQPNPITI 417

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +S LS  + +GA+  G+ +H  I K   E N  +  ALI MY++C ++  A  +F  M++
Sbjct: 418 SSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDRMDN 477

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           +NV+SW +MI+G+  HG  A AL+++  ML   I P   T+++V+ ACSH GL+ EG K 
Sbjct: 478 KNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKV 537

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA-DVLVWRTFLGACRVH 671
           FR M +E+ I   +EH  CMVDLLGR+G L EALE I   P SA    VW   LGAC VH
Sbjct: 538 FRVMTNEYRITPGIEHCTCMVDLLGRAGKLNEALELISEFPQSAIGPGVWGALLGACMVH 597

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            +++L K A++ + E D ++   ++LLSNLY S  H+   A +R+  K R L+K  GC+ 
Sbjct: 598 KNSDLAKLASQKLFELDSENAGYYVLLSNLYTSKKHYSEAAVVRQEAKTRKLVKTPGCTL 657

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           IE  ++ H F  G+  HP++  IY+ L++L  K+ E GY P T   L+++EEE+K   + 
Sbjct: 658 IEIGDRPHVFMAGDHLHPQSEAIYSYLERLTAKMIEAGYQPVTEAALYDVEEEEKEHMVK 717

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSEK+A+AFGL+ST     IR+ KNLRVC DCH A K+IS VT R IV+RD++RFHH +
Sbjct: 718 VHSEKLAIAFGLLSTEPGTEIRIIKNLRVCLDCHNATKFISKVTQRLIVVRDASRFHHFR 777

Query: 852 DGKCSCNDYW 861
           DG CSC DYW
Sbjct: 778 DGVCSCGDYW 787



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/370 (32%), Positives = 199/370 (53%), Gaps = 12/370 (3%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T +  L++   + +  +G+ VH    +  L  +  ++  L+SLYSKCGD++ A  +
Sbjct: 210 PDSTTLASSLRAAAEASHMAMGRCVHGYGVKCGLAEHEHVVTGLMSLYSKCGDMDSAQFL 269

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M N  D+V+++++IS Y   G    ++ +F E+   G+ PN     AVI   S   +
Sbjct: 270 FDRMDNP-DLVAYNALISGYSVNGMVESSVELFKELTASGWRPNSSTLVAVIPVYSPFGH 328

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
             +   ++ F++K    D+D  V  AL  ++ + + D+ESA  +FD M EK    W  MI
Sbjct: 329 ELLARCLHAFVVK-ARLDADALVSTALTTLYCRLN-DMESARSIFDAMLEKTMESWNAMI 386

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +   Q G    A+ LF  M      P+  T+S  +SAC+ L   + GK +H    +  L 
Sbjct: 387 SGYAQNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLE 446

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           L+V V  +L+DMYAKC   GS+ ++R +FDRM + NV+SW A+I+GY    G+  EA+KL
Sbjct: 447 LNVYVMTALIDMYAKC---GSIAEARSIFDRMDNKNVVSWNAMISGY-GLHGQGAEALKL 502

Query: 376 FSDMIQGQVAPNHFTFASVLKAC--GNLLD-SNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           + DM+  ++ P   TF SV+ AC  G L+D      +V T+  +    ++ C    ++ +
Sbjct: 503 YKDMLDARILPTSSTFLSVIYACSHGGLVDEGQKVFRVMTNEYRITPGIEHC--TCMVDL 560

Query: 433 YARSGRMEDA 442
             R+G++ +A
Sbjct: 561 LGRAGKLNEA 570



 Score =  174 bits (442), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 233/466 (50%), Gaps = 21/466 (4%)

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
           R  +    + +H L   +    ++ + ++L  LY K    ++A K+F ++ +  D + W+
Sbjct: 126 RGNDAAAARTLHGLSVAAGYAADTFVASALAKLYFKLSRGDDARKVFDTVPSP-DTILWN 184

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           ++++         +A+  FV M++ G   P+    ++ +RA +   ++A+G  ++G+ +K
Sbjct: 185 TLLAGLPGS----EALEAFVRMVDAGRVRPDSTTLASSLRAAAEASHMAMGRCVHGYGVK 240

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
           CG  + +  V   L+ ++ K   D++SA  +FD+M   + V +  +I+  +  G    ++
Sbjct: 241 CGLAEHEHVV-TGLMSLYSKCG-DMDSAQFLFDRMDNPDLVAYNALISGYSVNGMVESSV 298

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
            LF ++  SG+ P+  TL  V+   S        + LH++ ++  L  D  V  +L  +Y
Sbjct: 299 ELFKELTASGWRPNSSTLVAVIPVYSPFGHELLARCLHAFVVKARLDADALVSTALTTLY 358

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
            +      ++ +R +FD ML+  + SW A+I+GY Q+ G  + AV LF  M +  V PN 
Sbjct: 359 CRLN---DMESARSIFDAMLEKTMESWNAMISGYAQN-GLTEMAVALFQLMQELNVQPNP 414

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
            T +S L AC +L   ++ + V+    K    L+  V  +LI MYA+ G + +AR  F+ 
Sbjct: 415 ITISSTLSACAHLGALSLGKWVHRIISKEKLELNVYVMTALIDMYAKCGSIAEARSIFDR 474

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           +  KN+VS+N M+  Y  +    +A +L  ++ D  +  ++ TF S++   S  G + +G
Sbjct: 475 MDNKNVVSWNAMISGYGLHGQGAEALKLYKDMLDARILPTSSTFLSVIYACSHGGLVDEG 534

Query: 509 EQIHARI-----IKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +++   +     I  G E  HC    ++ +  R   +  A ++  E
Sbjct: 535 QKVFRVMTNEYRITPGIE--HC--TCMVDLLGRAGKLNEALELISE 576



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 51/149 (34%), Positives = 82/149 (55%), Gaps = 1/149 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  + A+    LM +    P+  T S  L +C       LGK VH ++++ KLE N  
Sbjct: 391 QNGLTEMAVALFQLMQELNVQPNPITISSTLSACAHLGALSLGKWVHRIISKEKLELNVY 450

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++ +LI +Y+KCG + EA  IF  M NK ++VSW++MIS Y   G+  +A+ ++ +ML+ 
Sbjct: 451 VMTALIDMYAKCGSIAEARSIFDRMDNK-NVVSWNAMISGYGLHGQGAEALKLYKDMLDA 509

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIY 203
              P    F +VI ACS+   V  G  ++
Sbjct: 510 RILPTSSTFLSVIYACSHGGLVDEGQKVF 538


>gi|79475105|ref|NP_193221.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122236284|sp|Q0WSH6.1|PP312_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14850; AltName: Full=Protein LOVASTATIN INSENSITIVE
           1
 gi|110735893|dbj|BAE99922.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658109|gb|AEE83509.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 684

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/642 (38%), Positives = 365/642 (56%), Gaps = 7/642 (1%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI+M+ K     ESA  V      +N V WT +I+   Q G    A+  F +M   G +P
Sbjct: 48  LINMYSKLD-HPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP 106

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           + FT      A + L L  +GKQ+H+ A++ G  LDV VGCS  DMY K  +    DD+R
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR---DDAR 163

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           K+FD + + N+ +W A I+  V + GR +EA++ F +  +    PN  TF + L AC + 
Sbjct: 164 KLFDEIPERNLETWNAFISNSV-TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
           L  N+  Q++   ++ G   D  V N LI  Y +  ++  +   F  +  KN VS+ ++V
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
            AY +N   EKA  L        V TS +  +S+LS  + +  +  G  IHA  +K+  E
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
               + +AL+ MY +C  +E + Q F EM ++N+++  S+I G+A  G    AL +F +M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402

Query: 582 LADGI--KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
              G    PN +T++++LSACS AG +  G K F SM   +GI    EHY+C+VD+LGR+
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G +  A EFI+ MP+   + VW     ACR+HG  +LG  AAE + + DP+D   H+LLS
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 522

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N +A+AG W     +R+ +K   + K AG SWI   N+VH F   + SH    EI   L 
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLA 582

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L  +++  GY PD    L++LEEE+K   +  HSEK+A+AFGL+S   S PIR+ KNLR
Sbjct: 583 KLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLR 642

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCH+  K++S    REI++RD+NRFH  KDG CSC DYW
Sbjct: 643 ICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 155/496 (31%), Positives = 247/496 (49%), Gaps = 12/496 (2%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFK 137
           D   LLLK+ I + +  LG++VH+ + ++   P    L N LI++YSK  D  E+ ++  
Sbjct: 7   DALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL-DHPESARLVL 65

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            +   R++VSW+S+IS     G    A+  F EM   G  PN++ F    +A ++     
Sbjct: 66  RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  I+   +KCG    DV VGC+  DM+ K  +  + A K+FD++ E+N   W   I+ 
Sbjct: 126 TGKQIHALAVKCGRI-LDVFVGCSAFDMYCKTRLR-DDARKLFDEIPERNLETWNAFISN 183

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
               G PR+AI  F++       P+  T    ++ACS+      G QLH   +R+G   D
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V V   L+D Y KC     +  S  +F  M   N +SW +++  YVQ+   D++A  L+ 
Sbjct: 244 VSVCNGLIDFYGKCK---QIRSSEIIFTEMGTKNAVSWCSLVAAYVQN-HEDEKASVLYL 299

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
              +  V  + F  +SVL AC  +    +   ++ HAVK        VG++L+ MY + G
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA--YTFASL 495
            +ED+ +AF+ + EKNLV+ N+++  YA     + A  L  E+   G G +    TF SL
Sbjct: 360 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419

Query: 496 LSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           LS  S  GA+  G +I   +  + G E     Y+ ++ M  R   VE A++  K+M  + 
Sbjct: 420 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479

Query: 555 VIS-WTSMITGFAKHG 569
            IS W ++      HG
Sbjct: 480 TISVWGALQNACRMHG 495



 Score =  152 bits (383), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 203/442 (45%), Gaps = 41/442 (9%)

Query: 31  SSSPPFIAQ------PTTSEPLSNRLIYHLNDGR------------VQKAIFTLDL---- 68
           S  PPF+A            P S RL+  L   R             Q   F+  L    
Sbjct: 38  SPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFF 97

Query: 69  -MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
            M ++G  P+  T+    K+    R    GK +H+L  +     +  +  S   +Y K  
Sbjct: 98  EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
             ++A K+F  +  +R++ +W++ IS+ V  G+  +AI  F+E   +   PN   F A +
Sbjct: 158 LRDDARKLFDEI-PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            ACS+  ++ +G  ++G +L+ G FD+DV V   LID + K    + S+  +F +M  KN
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSG-FDTDVSVCNGLIDFYGKCK-QIRSSEIIFTEMGTKN 274

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  ++    Q      A  L+L           F +S V+SAC+ +     G+ +H+
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            A++  +   + VG +LVDMY KC   G ++DS + FD M + N+++  ++I GY   G 
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKC---GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 391

Query: 368 RDKEAVKLFSDMIQGQVA--PNHFTFASVLKACGNLLDSNVAEQVY-----THAVKRGRA 420
            D  A+ LF +M        PN+ TF S+L AC          +++     T+ ++ G  
Sbjct: 392 VDM-ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450

Query: 421 LDDCVGNSLISMYARSGRMEDA 442
              C+    + M  R+G +E A
Sbjct: 451 HYSCI----VDMLGRAGMVERA 468



 Score =  105 bits (263), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 24/377 (6%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + DGR ++AI       +   HP+  T+   L +C    + +LG  +H L+ RS  + + 
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 244

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + N LI  Y KC  +  +  IF  MG K + VSW S++++YV   +   A  +++   +
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
                +++  S+V+ AC+    + +G  I+   +K    +  + VG AL+DM+ K    +
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK-ACVERTIFVGSALVDMYGKCGC-I 361

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF--LPDRFTLSGVVS 291
           E + + FD+M EKN V    +I      G    A+ LF +M   G    P+  T   ++S
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421

Query: 292 ACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ACS      +G ++      ++ I  G     C+    VDM  +    G V+ + +   +
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI----VDMLGRA---GMVERAYEFIKK 474

Query: 347 MLDHNVMSWTAIITGYVQSGGRDK----EAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           M     +S    +    +  G+ +     A  LF   +  + + NH   ++   A G   
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK--LDPKDSGNHVLLSNTFAAAGRWA 532

Query: 403 DSN-VAEQVYTHAVKRG 418
           ++N V E++    +K+G
Sbjct: 533 EANTVREELKGVGIKKG 549



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
           SA     LL  A S  ++  G  +HARI+K+        + N LI+MYS+  + E+A  V
Sbjct: 5   SADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV 64

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            +    RNV+SWTS+I+G A++G  + AL  F++M  +G+ PN  T+     A +   L 
Sbjct: 65  LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLP 124

Query: 607 SEG 609
             G
Sbjct: 125 VTG 127


>gi|79506598|ref|NP_196000.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170265|sp|Q9FFN1.1|PP363_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g03800; AltName: Full=Protein EMBRYO DEFECTIVE 175
 gi|9758009|dbj|BAB08606.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|26449508|dbj|BAC41880.1| unknown protein [Arabidopsis thaliana]
 gi|58013014|gb|AAW62960.1| embryo-defective 175 [Arabidopsis thaliana]
 gi|58013016|gb|AAW62961.1| embryo-defective 175 [Arabidopsis thaliana]
 gi|332003273|gb|AED90656.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 896

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 273/822 (33%), Positives = 456/822 (55%), Gaps = 43/822 (5%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +D +  LL+   +  +  + K VH+   + + E  + + N+LIS Y K G   EA  +F 
Sbjct: 80  IDGFFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFV 138

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENV 196
           S+ +   +VS++++IS +     +++A+ +F  M + G   PNEY F A++ AC      
Sbjct: 139 SLSSP-TVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRF 197

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS-VDLESAYKVFDKMTEKNTVGWTLMI 255
           ++G  I+G ++K G+ +S V V  +L+ ++ K S    +   K+FD++ +++   W  ++
Sbjct: 198 SLGIQIHGLIVKSGFLNS-VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVV 256

Query: 256 TRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +   + G    A  LF +M  + GF  D FTLS ++S+C++  +   G++LH  AIR GL
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGL 316

Query: 315 ALDVCVGCSLVDMYAKC----TVD------------------------GSVDDSRKVFDR 346
             ++ V  +L+  Y+K      V+                        G VD + ++F  
Sbjct: 317 MQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFAN 376

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           + + N +++ A++ G+ ++G   K A+KLF+DM+Q  V    F+  S + ACG + +  V
Sbjct: 377 VTEKNTITYNALMAGFCRNGHGLK-ALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKV 435

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS---YNTMVDA 463
           +EQ++   +K G A + C+  +L+ M  R  RM DA + F+  +  NL S     +++  
Sbjct: 436 SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ-WPSNLDSSKATTSIIGG 494

Query: 464 YAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
           YA+N   +KA  L H  + +  +     +   +L+   ++G    G QIH   +K+G+ S
Sbjct: 495 YARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFS 554

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           +  + N+LISMY++C + + A ++F  M + +VISW S+I+ +        AL ++ +M 
Sbjct: 555 DISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN 614

Query: 583 ADGIKPNGITYIAVLSAC--SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
              IKP+ IT   V+SA   + +  +S     F SM   + I    EHY   V +LG  G
Sbjct: 615 EKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWG 674

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            L EA + I SMP+  +V V R  L +CR+H +T + K  A++IL   P+ P+ +IL SN
Sbjct: 675 LLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSN 734

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +Y+++G W     IR+ M+ER   K    SWI  +NK+H FH  +TSHP+  +IY  L+ 
Sbjct: 735 IYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEI 794

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLR 819
           L ++  + GY P+T +VL E++E  K  +LF HS K+AV +G++S+ ++ KP+RV KN+ 
Sbjct: 795 LIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVM 854

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCH   KYIS+V  REIVLRDS+ FHH  +GKCSC D W
Sbjct: 855 LCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 229/463 (49%), Gaps = 48/463 (10%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK--CGDLNEA 132
            P+  T+  +L +C+R   F LG  +H L+ +S    +  + NSL+SLY K      ++ 
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACS 191
            K+F  +  +RD+ SW++++SS V  GK   A  +F EM  + GF  + +  S ++ +C+
Sbjct: 238 LKLFDEIP-QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK----------------------- 228
           ++  +  G  ++G  ++ G    ++ V  ALI  + K                       
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355

Query: 229 ---------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
                    G VD  SA ++F  +TEKNT+ +  ++    + G    A++LF DM+  G 
Sbjct: 356 EMITAYMSFGMVD--SAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
               F+L+  V AC  +      +Q+H + I+ G A + C+  +L+DM  +C     + D
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE---RMAD 470

Query: 340 SRKVFDRM---LDHNVMSWTAIITGYVQSGGRDKEAVKLF-SDMIQGQVAPNHFTFASVL 395
           + ++FD+    LD +  + T+II GY ++G  DK AV LF   + + ++  +  +   +L
Sbjct: 471 AEEMFDQWPSNLDSSKAT-TSIIGGYARNGLPDK-AVSLFHRTLCEQKLFLDEVSLTLIL 528

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
             CG L    +  Q++ +A+K G   D  +GNSLISMYA+    +DA K F ++ E +++
Sbjct: 529 AVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVI 588

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           S+N+++  Y    N ++A  L   + +  +     T   ++S 
Sbjct: 589 SWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631


>gi|347954526|gb|AEP33763.1| organelle transcript processing 82, partial [Isatis tinctoria]
          Length = 671

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 249/661 (37%), Positives = 388/661 (58%), Gaps = 35/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF+ + E N + W  MI        P  ++ L++ M+  G LP+ +T   ++ +
Sbjct: 14  LPYATSVFETIQEPNQLIWNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLKS 73

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ + FT G+Q+H   ++ G  LD+ V  SL+ MY +   +  ++D+ KVFDR    +V
Sbjct: 74  CAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQ---NWRLEDAYKVFDRSSHRDV 130

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
           +S+TA+ITGY   G                              G  KEA++LF +M++ 
Sbjct: 131 VSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKM 190

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V P+  T+ +VL AC +     +  QV++     G   +  + N+LI +Y++ G +E A
Sbjct: 191 NVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKCGEVETA 250

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              F+ L  K+++S+NT++  Y      ++A  L  E+  +G   +  T  S+L   + +
Sbjct: 251 CGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSVLPACAHL 310

Query: 503 GAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           GAI  G  IH  I K   G  +   +  +LI MY++C ++EAA QVF  M  +++ SW +
Sbjct: 311 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSSWNA 370

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI GFA HG A  + ++F +M   GI+P+ IT++ +LSACSH+G++  G   FRSM  ++
Sbjct: 371 MIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIFRSMTQDY 430

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            +  ++EHY CM+DLLG SG   EA E I +M +  D ++W + L AC++HG+ EL +  
Sbjct: 431 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVIWCSLLKACKMHGNVELAESF 490

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +++ +P++P+++ILLSN+YASAG WE VA IR  +  + + K  GCS IE D+ V +
Sbjct: 491 AQNLIKIEPENPSSYILLSNIYASAGRWEDVARIRALLNGKCMKKVPGCSSIEVDSVVFE 550

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F VG+  HP+  EIY  L+++ + ++E G++PDT+ VL E+EEE K   L  HSEK+A+A
Sbjct: 551 FVVGDKFHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 610

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLIST     + + KNLRVC +CH A K +S +  REIV RD  RFHH +DG CSCNDY
Sbjct: 611 FGLISTKPGTKLTIVKNLRVCRNCHEATKLLSKIYKREIVARDRTRFHHFRDGVCSCNDY 670

Query: 861 W 861
           W
Sbjct: 671 W 671



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 142/512 (27%), Positives = 245/512 (47%), Gaps = 45/512 (8%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A  +F+++     ++ W++MI  +      V ++ ++V M+ LG  PN Y F  +++
Sbjct: 14  LPYATSVFETIQEPNQLI-WNTMIRGHALSSDPVSSLTLYVCMVSLGLLPNSYTFPFLLK 72

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG------------------- 229
           +C+ ++    G  I+G +LK G FD D+ V  +LI M+V+                    
Sbjct: 73  SCAKSKTFTEGQQIHGQVLKLG-FDLDLYVHTSLISMYVQNWRLEDAYKVFDRSSHRDVV 131

Query: 230 -----------SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
                        D+ SA K+FD++  K+ V W  MI+   + GC ++A+ LF +M+   
Sbjct: 132 SYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAETGCYKEALELFEEMMKMN 191

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD  T   V+SAC+       G+Q+HSW    G   ++ +  +L+D+Y+KC   G V+
Sbjct: 192 VRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIVNALIDLYSKC---GEVE 248

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +  +F  +   +V+SW  +I GY       KEA+ LF +M++    PN  T  SVL AC
Sbjct: 249 TACGLFQGLSYKDVISWNTLIGGYTHMNLY-KEALLLFQEMLRSGETPNDVTMLSVLPAC 307

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
            +L   ++   ++ +  KR + + +   +  SLI MYA+ G +E A + F S+  K+L S
Sbjct: 308 AHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSMLHKSLSS 367

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +N M+  +A +  ++ +F+L   +   G+     TF  LLS  S  G +  G  I  R +
Sbjct: 368 WNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSHSGMLDLGRHIF-RSM 426

Query: 517 KSGFESNHCI--YNALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHGFAA 572
              ++    +  Y  +I +       + A ++    EME   VI W S++     HG   
Sbjct: 427 TQDYKMTPKLEHYGCMIDLLGHSGLFKEAEEMINTMEMEPDGVI-WCSLLKACKMHGNVE 485

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            A E F + L      N  +YI + +  + AG
Sbjct: 486 LA-ESFAQNLIKIEPENPSSYILLSNIYASAG 516



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 189/364 (51%), Gaps = 38/364 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  LLKSC +S+ F  G+ +H  + +   + +  +  SLIS+Y +   
Sbjct: 55  MVSLGLLPNSYTFPFLLKSCAKSKTFTEGQQIHGQVLKLGFDLDLYVHTSLISMYVQNWR 114

Query: 129 LNEANKIFK------------------SMGNKR------------DIVSWSSMISSYVNR 158
           L +A K+F                   S G+ R            D+VSW++MIS Y   
Sbjct: 115 LEDAYKVFDRSSHRDVVSYTALITGYASRGDIRSAQKLFDEIPVKDVVSWNAMISGYAET 174

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G   +A+ +F EM+++   P+E  +  V+ AC+++ ++ +G  ++ ++   G FDS++ +
Sbjct: 175 GCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHG-FDSNLKI 233

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             ALID++ K   ++E+A  +F  ++ K+ + W  +I   T +   ++A+ LF +M+ SG
Sbjct: 234 VNALIDLYSKCG-EVETACGLFQGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSG 292

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTVDGS 336
             P+  T+  V+ AC+ L     G+ +H +  +   G+     +  SL+DMYAKC   G 
Sbjct: 293 ETPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKC---GD 349

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           ++ + +VF+ ML  ++ SW A+I G+    GR   +  LFS M +  + P+  TF  +L 
Sbjct: 350 IEAAHQVFNSMLHKSLSSWNAMIFGFAMH-GRADASFDLFSRMRKIGIEPDDITFVGLLS 408

Query: 397 ACGN 400
           AC +
Sbjct: 409 ACSH 412



 Score =  125 bits (314), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 183/392 (46%), Gaps = 47/392 (11%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+   + M +    PD  TY  +L +C  S +  LG+ VHS +     + N  I+
Sbjct: 175 GCYKEALELFEEMMKMNVRPDESTYVTVLSACAHSGSIELGRQVHSWVDDHGFDSNLKIV 234

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LYSKCG++  A  +F+ +  K D++SW+++I  Y +     +A+ +F EML  G 
Sbjct: 235 NALIDLYSKCGEVETACGLFQGLSYK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 293

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLES 235
            PN+    +V+ AC++   + IG  I+ ++ K      +   +  +LIDM+ K   D+E+
Sbjct: 294 TPNDVTMLSVLPACAHLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCG-DIEA 352

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A++VF+ M  K+   W  MI      G    +  LF  M   G  PD  T  G++SACS 
Sbjct: 353 AHQVFNSMLHKSLSSWNAMIFGFAMHGRADASFDLFSRMRKIGIEPDDITFVGLLSACSH 412

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
             +   G+ +                      +   T D  +    + +  M+D      
Sbjct: 413 SGMLDLGRHI----------------------FRSMTQDYKMTPKLEHYGCMID------ 444

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
              + G+    G  KEA ++ + M   ++ P+   + S+LKAC    +  +AE    + +
Sbjct: 445 ---LLGH---SGLFKEAEEMINTM---EMEPDGVIWCSLLKACKMHGNVELAESFAQNLI 495

Query: 416 KRGRALDDCVGNSLI---SMYARSGRMEDARK 444
           K    ++    +S I   ++YA +GR ED  +
Sbjct: 496 K----IEPENPSSYILLSNIYASAGRWEDVAR 523


>gi|357477961|ref|XP_003609266.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355510321|gb|AES91463.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 738

 Score =  463 bits (1191), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/702 (36%), Positives = 404/702 (57%), Gaps = 36/702 (5%)

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM-FVKGSVDLESAYKVFDKMTEK---NTV 249
           +N+     I+  ++K G  ++ V V   LI    V  S DL  A  +F++  +    N  
Sbjct: 39  KNINTFKQIHSLIIKTG-LNNTVFVQSKLIHFCAVSPSGDLSYALSLFEENQQHHKHNVF 97

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  +I   +    P  ++ LF  M+  G  P+  T   +  +C++ +    GKQLH+ A
Sbjct: 98  IWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHA 157

Query: 310 IRTGLALDVCVGCSLVDMYAKC----------------------------TVDGSVDDSR 341
           ++  L  +  V  S++ MYA                                 G +DD+R
Sbjct: 158 LKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDAR 217

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           ++FD +   +V+SW A+I+GYVQSG R +EA+  F +M +  V PN  T   VL ACG+ 
Sbjct: 218 RLFDEIPVKDVVSWNAMISGYVQSG-RFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHT 276

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
               + + + +     G   +  + N+LI MY + G  + AR+ F+ + EK+++S+NTM+
Sbjct: 277 RSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKCGETDIARELFDGIEEKDVISWNTMI 336

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GF 520
             Y+     E+A  L   +  + V  +  TF  +L   + +GA+  G+ +HA I K+   
Sbjct: 337 GGYSYLSLYEEALALFEVMLRSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRN 396

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            SN  ++ +LI MY++C  +EAA +VF+ M  RN+ SW +M++GFA HG A RAL +F +
Sbjct: 397 SSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSE 456

Query: 581 MLADGI-KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           M+  G+ +P+ IT++ VLSAC+ AGL+  G ++FRSM  ++GI  +++HY CM+DLL R+
Sbjct: 457 MVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQDYGISPKLQHYGCMIDLLARA 516

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
               EA   +++M +  D  +W + L AC+ HG  E G++ AE + + +P++  A +LLS
Sbjct: 517 EKFEEAEILMKNMEMEPDGAIWGSLLSACKAHGRVEFGEYVAERLFQLEPENAGAFVLLS 576

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA AG W+ VA IR R+ ++ + K  GC+ IE D  VH+F VG+  HP+   IY  L+
Sbjct: 577 NIYAGAGRWDDVARIRTRLNDKGMKKVPGCTSIEIDGDVHEFLVGDKFHPECNNIYKMLN 636

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           ++   ++E G++P+T+ VL++++EE K   L QHSEK+A++FGLI T     IR+ KNLR
Sbjct: 637 EVDKLLEENGFVPNTSEVLYDMDEEWKEGALSQHSEKLAISFGLIKTKPGTTIRIVKNLR 696

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VCG+CH+A K IS +  REI+ RD NRFHH KDG CSCND W
Sbjct: 697 VCGNCHSATKLISKIFNREIIARDRNRFHHFKDGFCSCNDCW 738



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 148/533 (27%), Positives = 249/533 (46%), Gaps = 50/533 (9%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL--YSKCGDLNEA 132
           HP L+    LL+ C   +N +  K +HSL+ ++ L     + + LI     S  GDL+ A
Sbjct: 29  HPYLN----LLEKC---KNINTFKQIHSLIIKTGLNNTVFVQSKLIHFCAVSPSGDLSYA 81

Query: 133 NKIFK--SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
             +F+     +K ++  W+S+I  Y      + ++H+F  ML  G  PN + F  + ++C
Sbjct: 82  LSLFEENQQHHKHNVFIWNSLIRGYSLSSSPLSSLHLFSRMLYYGVQPNSHTFPFLFKSC 141

Query: 191 SNTENVAIGHIIYGFLLKCGY--------------------------FDS----DVCVGC 220
           +  +    G  ++   LK                             FD     D     
Sbjct: 142 TKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGEMDFARLVFDKSSLRDAVSFT 201

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           ALI  +V     L+ A ++FD++  K+ V W  MI+   Q G   +AI  F +M  +  L
Sbjct: 202 ALITGYVSQGC-LDDARRLFDEIPVKDVVSWNAMISGYVQSGRFEEAIVCFYEMQEANVL 260

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P++ T+  V+SAC        GK + SW    G   ++ +  +L+DMY KC   G  D +
Sbjct: 261 PNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSNLQLTNALIDMYCKC---GETDIA 317

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R++FD + + +V+SW  +I GY      + EA+ LF  M++  V PN  TF  +L AC  
Sbjct: 318 RELFDGIEEKDVISWNTMIGGYSYLSLYE-EALALFEVMLRSNVKPNDVTFLGILHACAC 376

Query: 401 LLDSNVAEQVYTHAVKRGR-ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
           L   ++ + V+ +  K  R + +  +  SLI MYA+ G +E A + F S+  +NL S+N 
Sbjct: 377 LGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGCIEAAERVFRSMHSRNLASWNA 436

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGV-GTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           M+  +A + ++E+A  L  E+ + G+      TF  +LS  +  G +  G Q    +I+ 
Sbjct: 437 MLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLSACTQAGLVDLGHQYFRSMIQD 496

Query: 519 -GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
            G       Y  +I + +R    E A  + K ME + +   W S+++    HG
Sbjct: 497 YGISPKLQHYGCMIDLLARAEKFEEAEILMKNMEMEPDGAIWGSLLSACKAHG 549



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 222/483 (45%), Gaps = 75/483 (15%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  L KSC +++  H GK +H+   +  L  N  +  S+I +Y+  G+
Sbjct: 122 MLYYGVQPNSHTFPFLFKSCTKAKATHEGKQLHAHALKLALHFNPHVHTSVIHMYASVGE 181

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
           ++ A  +F     +                              +D+VSW++MIS YV  
Sbjct: 182 MDFARLVFDKSSLRDAVSFTALITGYVSQGCLDDARRLFDEIPVKDVVSWNAMISGYVQS 241

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G+  +AI  F EM E    PN+     V+ AC +T +  +G  I  ++   G F S++ +
Sbjct: 242 GRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNG-FGSNLQL 300

Query: 219 GCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
             ALIDM+ K G  D+  A ++FD + EK+ + W  MI   + L    +A+ LF  M+ S
Sbjct: 301 TNALIDMYCKCGETDI--ARELFDGIEEKDVISWNTMIGGYSYLSLYEEALALFEVMLRS 358

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL--ALDVCVGCSLVDMYAKCTVDG 335
              P+  T  G++ AC+ L     GK +H++ I   L  + +  +  SL+DMYAKC   G
Sbjct: 359 NVKPNDVTFLGILHACACLGALDLGKWVHAY-IDKNLRNSSNASLWTSLIDMYAKC---G 414

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASV 394
            ++ + +VF  M   N+ SW A+++G+   G  ++ A+ LFS+M+ +G   P+  TF  V
Sbjct: 415 CIEAAERVFRSMHSRNLASWNAMLSGFAMHGHAER-ALALFSEMVNKGLFRPDDITFVGV 473

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L AC      ++  Q +                S+I  Y  S +++              
Sbjct: 474 LSACTQAGLVDLGHQYF---------------RSMIQDYGISPKLQ-------------- 504

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
             Y  M+D  A+    E+A  L+  +E    G     + SLLS   + G +  GE +  R
Sbjct: 505 -HYGCMIDLLARAEKFEEAEILMKNMEMEPDGA---IWGSLLSACKAHGRVEFGEYVAER 560

Query: 515 IIK 517
           + +
Sbjct: 561 LFQ 563



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 73/253 (28%), Positives = 130/253 (51%), Gaps = 3/253 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  GR ++AI     M +    P+  T  ++L +C  +R+  LGK + S +  +    N
Sbjct: 238 YVQSGRFEEAIVCFYEMQEANVLPNKSTMVVVLSACGHTRSGELGKWIGSWVRDNGFGSN 297

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+LI +Y KCG+ + A ++F  +  ++D++SW++MI  Y       +A+ +F  ML
Sbjct: 298 LQLTNALIDMYCKCGETDIARELFDGI-EEKDVISWNTMIGGYSYLSLYEEALALFEVML 356

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
                PN+  F  ++ AC+    + +G  ++ ++ K     S+  +  +LIDM+ K    
Sbjct: 357 RSNVKPNDVTFLGILHACACLGALDLGKWVHAYIDKNLRNSSNASLWTSLIDMYAKCGC- 415

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVS 291
           +E+A +VF  M  +N   W  M++     G    A+ LF +M+  G F PD  T  GV+S
Sbjct: 416 IEAAERVFRSMHSRNLASWNAMLSGFAMHGHAERALALFSEMVNKGLFRPDDITFVGVLS 475

Query: 292 ACSELELFTSGKQ 304
           AC++  L   G Q
Sbjct: 476 ACTQAGLVDLGHQ 488


>gi|242076234|ref|XP_002448053.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
 gi|241939236|gb|EES12381.1| hypothetical protein SORBIDRAFT_06g020256 [Sorghum bicolor]
          Length = 693

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 231/616 (37%), Positives = 371/616 (60%), Gaps = 5/616 (0%)

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +T  + +++      G P DA+ LF++M+ ++   PD+ T++  + +CS +     G+ +
Sbjct: 82  STPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDVGRGI 141

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
            ++A++ GL  D  V  SL+ MYA C     V  ++ +FD + ++ V+ W AIIT Y+++
Sbjct: 142 QAYAVKRGLMADRFVLSSLIHMYASCR---DVAAAQLLFDAVEENGVVMWNAIITAYMKN 198

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G    E V++F  M++  VA +  T  SV+ ACG + D+ + + V  +  ++G   +  +
Sbjct: 199 GNW-MEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRNL 257

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
             +LI MYA+ G +  AR+ F+ +  +++V+++ M+  Y +     +A  L  E++   V
Sbjct: 258 MTALIDMYAKCGELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQLAEV 317

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             +  T  S+LS  + +GA+  G+ +H+ I +        +  AL+  Y++C  ++ A +
Sbjct: 318 EPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKCGCIDDAVE 377

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
            F+ M  +N  +WT++I G A +G    ALE+F  M    I+P  +T+I VL ACSH+ L
Sbjct: 378 AFESMPVKNSWTWTALIKGMATNGRGREALELFSSMRKASIEPTDVTFIGVLMACSHSCL 437

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + EG +HF SM  ++GI  R EHY C+VDLLGR+G + EA +FIR+MP+  + ++WR  L
Sbjct: 438 VEEGRRHFDSMTQDYGIKPRAEHYGCVVDLLGRAGLIDEAYQFIRTMPIEPNAVIWRALL 497

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
            +C VH + E+G+ A + I+  +P     +ILLSN+YAS G W+  A IRK MK+R + K
Sbjct: 498 SSCAVHKNVEIGEEALKQIVSLNPSHSGDYILLSNIYASVGQWKNAAMIRKEMKDRGIEK 557

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
             GCS IE D  V +F   ++ HP+  EIY +++++  +IK  GY+P+T  V  E++E +
Sbjct: 558 TPGCSLIELDGVVVEFFAEDSDHPQLKEIYQKVEEMIDRIKMAGYIPNTADVRLEVDEHE 617

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           K   +  HSEK+A+AFGL+       IR+ KNLRVC DCH+A K IS V  REIV+RD N
Sbjct: 618 KEVSVSHHSEKLAIAFGLMKLDPGATIRLSKNLRVCTDCHSATKLISKVYNREIVVRDRN 677

Query: 846 RFHHIKDGKCSCNDYW 861
           RFHH KDG CSCNDYW
Sbjct: 678 RFHHFKDGTCSCNDYW 693



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 235/453 (51%), Gaps = 25/453 (5%)

Query: 39  QPTTSEPLSNRLIYHL-NDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           +P  S P  N L+  L + G  + A+   ++++      PD  T +  LKSC R     +
Sbjct: 78  RPPLSTPCYNVLMRALLHAGHPEDALHLFVEMLDVASVCPDQHTVACALKSCSRMCTLDV 137

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ + +   +  L  +  +L+SLI +Y+ C D+  A  +F ++  +  +V W+++I++Y+
Sbjct: 138 GRGIQAYAVKRGLMADRFVLSSLIHMYASCRDVAAAQLLFDAV-EENGVVMWNAIITAYM 196

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G  ++ + MF  MLE+G   +E    +V+ AC    +  +G  +  ++ + G   +  
Sbjct: 197 KNGNWMEVVEMFKGMLEVGVAFDEITLVSVVTACGRIGDAKLGKWVAEYVDEKGLVRNRN 256

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +  ALIDM+ K   +L  A ++FD M  ++ V W+ MI+  TQ    R+A+ LF +M L
Sbjct: 257 LM-TALIDMYAKCG-ELGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALALFSEMQL 314

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +   P+  T+  V+SAC+ L    +GK +HS+  R  L+L + +G +LVD YAKC   G 
Sbjct: 315 AEVEPNDVTMVSVLSACAVLGALETGKWVHSYIRRKRLSLTIILGTALVDFYAKC---GC 371

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +DD+ + F+ M   N  +WTA+I G + + GR +EA++LFS M +  + P   TF  VL 
Sbjct: 372 IDDAVEAFESMPVKNSWTWTALIKG-MATNGRGREALELFSSMRKASIEPTDVTFIGVLM 430

Query: 397 ACGNLLDSNVAEQVYTH--------AVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           AC +   S + E+   H         +K       CV    + +  R+G +++A +   +
Sbjct: 431 ACSH---SCLVEEGRRHFDSMTQDYGIKPRAEHYGCV----VDLLGRAGLIDEAYQFIRT 483

Query: 449 L-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           +  E N V +  ++ + A + N E   E L +I
Sbjct: 484 MPIEPNAVIWRALLSSCAVHKNVEIGEEALKQI 516


>gi|449436619|ref|XP_004136090.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Cucumis sativus]
          Length = 723

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 242/662 (36%), Positives = 373/662 (56%), Gaps = 37/662 (5%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D + A ++FD++ E N   W  MI   ++L  P+  + L+L+M+  G  PDR+T   +  
Sbjct: 67  DFQYARRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFK 126

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
             +       G+QLH   ++ GL  +V V  +LV MY  C   G +D +R VFD     +
Sbjct: 127 GFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLC---GQLDTARGVFDVCPKAD 183

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V++W  II+ Y    G+ +E+ +LF  M   QV P   T   VL AC  L D    ++V+
Sbjct: 184 VITWNMIISAY-NKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVH 242

Query: 412 THAVKRGRALDDCV-GNSLISMYARSGRMEDA---------------------------- 442
           ++ VK  +   + V  N++I MYA  G M+ A                            
Sbjct: 243 SY-VKNCKVESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEI 301

Query: 443 ---RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
              R  F+ + EK+ VS+  M+D Y ++   ++A EL   ++ T V    +T  S+L+  
Sbjct: 302 DVARNYFDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTAC 361

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           + +GA+  GE I   I ++  +++  + NALI MY +C +V+ A  +F+EM  R+  +WT
Sbjct: 362 AHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKCGDVDKAESIFREMSQRDKFTWT 421

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G A +G   +AL++F  ML   I P+ ITYI VLSAC+H GL+ +G K+F  M  +
Sbjct: 422 AMIVGLAVNGHGEKALDMFSNMLKASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQ 481

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           HGI   + HY C+VDLL R+G L EA E I +MP+ A+ +VW   L  CRV+ ++++ + 
Sbjct: 482 HGIEPNIAHYGCLVDLLARAGRLKEAYEVIENMPIKANSIVWGALLAGCRVYRESDMAEM 541

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
             + ILE +P + A ++LL N+YA+   W  +  +R+ M ++ + K  GCS IE + +VH
Sbjct: 542 VVKQILELEPDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGIKKTPGCSLIEMNGRVH 601

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F  G+ SHP+T  I A+LD++   +K  GY PD + V  ++ EE K   +F+HSEK+A+
Sbjct: 602 EFVAGDRSHPQTKNIDAKLDKMTQDLKLAGYSPDISEVFLDIAEEDKENSVFRHSEKLAI 661

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLI++     IR+ KNLR+C DCH   K +S V  RE+++RD  RFHH K G CSC D
Sbjct: 662 AFGLINSPPGVTIRITKNLRMCMDCHNMAKLVSKVYNREVIVRDRTRFHHFKHGLCSCKD 721

Query: 860 YW 861
           YW
Sbjct: 722 YW 723



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 146/558 (26%), Positives = 264/558 (47%), Gaps = 44/558 (7%)

Query: 100 VHSLLTRSKLEPNSVILNSLISL--YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           VH    +  L  N V+ N +++     + GD   A ++F  +    ++  W++MI  Y  
Sbjct: 37  VHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYARRLFDEIPEP-NLFIWNTMIRGYSR 95

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                  + +++EML  G  P+ Y F  + +  +    +  G  ++G +LK G    +V 
Sbjct: 96  LDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHG-LQYNVF 154

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V  AL+ M++     L++A  VFD   + + + W ++I+   ++G   ++ RLFL M   
Sbjct: 155 VHTALVQMYLLCG-QLDTARGVFDVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDK 213

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC------ 331
             LP   TL  V+SACS+L+   +GK++HS+     +  ++ +  +++DMYA C      
Sbjct: 214 QVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLENAMIDMYADCGEMDSA 273

Query: 332 ----------------------TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
                                 T  G +D +R  FD+M + + +SWTA+I GY++S  R 
Sbjct: 274 LGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYVSWTAMIDGYIRS-NRF 332

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           KEA++LF +M    V P+ FT  SVL AC +L    + E + T+  +     D  V N+L
Sbjct: 333 KEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNAL 392

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MY + G ++ A   F  + +++  ++  M+   A N + EKA ++   +    +    
Sbjct: 393 IDMYFKCGDVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEKALDMFSNMLKASILPDE 452

Query: 490 YTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            T+  +LS  +  G + KG +   R+  + G E N   Y  L+ + +R   ++ A++V +
Sbjct: 453 ITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAGRLKEAYEVIE 512

Query: 549 EMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA---VLSACSHAG 604
            M  + N I W +++ G   +  +  A E+  K + +    NG  Y+    + +AC    
Sbjct: 513 NMPIKANSIVWGALLAGCRVYRESDMA-EMVVKQILELEPDNGAVYVLLCNIYAACKRWN 571

Query: 605 LISEGWKHFRSMYDEHGI 622
            + E     R M  + GI
Sbjct: 572 DLRE----LRQMMMDKGI 585



 Score =  172 bits (437), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 127/519 (24%), Positives = 235/519 (45%), Gaps = 74/519 (14%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  PD  T+  L K   R      G+ +H  + +  L+ N  +  +L+ +Y  CG 
Sbjct: 109 MLRRGVKPDRYTFPFLFKGFTRDIALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQ 168

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+ A  +F  +  K D+++W+ +IS+Y   GK  ++  +F+ M +    P       V+ 
Sbjct: 169 LDTARGVF-DVCPKADVITWNMIISAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLS 227

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-------------------- 228
           ACS  +++  G  ++ ++  C   +S++ +  A+IDM+                      
Sbjct: 228 ACSKLKDLRTGKKVHSYVKNCK-VESNLVLENAMIDMYADCGEMDSALGIFRSMNNRDII 286

Query: 229 ------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
                       G +D+   Y  FDKM EK+ V WT MI    +    ++A+ LF +M  
Sbjct: 287 SWTTIVSGFTNLGEIDVARNY--FDKMPEKDYVSWTAMIDGYIRSNRFKEALELFRNMQA 344

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +   PD FT+  V++AC+ L     G+ + ++  R  +  D+ V  +L+DMY KC   G 
Sbjct: 345 TNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKNDLFVRNALIDMYFKC---GD 401

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           VD +  +F  M   +  +WTA+I G   +G  +K A+ +FS+M++  + P+  T+  VL 
Sbjct: 402 VDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK-ALDMFSNMLKASILPDEITYIGVLS 460

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC            +T  V +GR          + M ++ G             E N+  
Sbjct: 461 AC-----------THTGLVDKGRKY-------FLRMTSQHG------------IEPNIAH 490

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           Y  +VD  A+    ++A+E+   IE+  +  ++  + +LL+G          E +  +I+
Sbjct: 491 YGCLVDLLARAGRLKEAYEV---IENMPIKANSIVWGALLAGCRVYRESDMAEMVVKQIL 547

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           +     N  +Y  L ++Y+ C       ++ + M D+ +
Sbjct: 548 ELE-PDNGAVYVLLCNIYAACKRWNDLRELRQMMMDKGI 585



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 192/433 (44%), Gaps = 80/433 (18%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ +++     +M  K   P   T  L+L +C + ++   GK VHS +   K+E N V+ 
Sbjct: 198 GKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTGKKVHSYVKNCKVESNLVLE 257

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNK------------------------------RDIV 146
           N++I +Y+ CG+++ A  IF+SM N+                              +D V
Sbjct: 258 NAMIDMYADCGEMDSALGIFRSMNNRDIISWTTIVSGFTNLGEIDVARNYFDKMPEKDYV 317

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW++MI  Y+   +  +A+ +F  M      P+E+   +V+ AC++   + +G  I  ++
Sbjct: 318 SWTAMIDGYIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYI 377

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
            +     +D+ V  ALIDM+ K   D++ A  +F +M++++   WT MI      G    
Sbjct: 378 DR-NKIKNDLFVRNALIDMYFKCG-DVDKAESIFREMSQRDKFTWTAMIVGLAVNGHGEK 435

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+ +F +M+ +  LPD  T  GV+SAC+                 TGL            
Sbjct: 436 ALDMFSNMLKASILPDEITYIGVLSACTH----------------TGL------------ 467

Query: 327 MYAKCTVDGSVDDSRKVFDRM-----LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
                     VD  RK F RM     ++ N+  +  ++   +   GR KEA ++  +M  
Sbjct: 468 ----------VDKGRKYFLRMTSQHGIEPNIAHYGCLV-DLLARAGRLKEAYEVIENM-- 514

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             +  N   + ++L  C    +S++AE V    ++     +  V   L ++YA   R  D
Sbjct: 515 -PIKANSIVWGALLAGCRVYRESDMAEMVVKQILEL-EPDNGAVYVLLCNIYAACKRWND 572

Query: 442 ARKAFESLFEKNL 454
            R+  + + +K +
Sbjct: 573 LRELRQMMMDKGI 585



 Score =  116 bits (290), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 78/306 (25%), Positives = 142/306 (46%), Gaps = 7/306 (2%)

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA--RSGRMEDA 442
           +P      S+L+ C ++   +  +QV+  A+K+G   +  + N +++       G  + A
Sbjct: 15  SPPTHPLISLLETCESM---DQLQQVHCQAIKKGLNANPVLQNRVMTFCCTHEYGDFQYA 71

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R+ F+ + E NL  +NTM+  Y++    +    L  E+   GV    YTF  L  G +  
Sbjct: 72  RRLFDEIPEPNLFIWNTMIRGYSRLDFPQLGVSLYLEMLRRGVKPDRYTFPFLFKGFTRD 131

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            A+  G Q+H  ++K G + N  ++ AL+ MY  C  ++ A  VF      +VI+W  +I
Sbjct: 132 IALEYGRQLHGHVLKHGLQYNVFVHTALVQMYLLCGQLDTARGVFDVCPKADVITWNMII 191

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           + + K G    +  +F  M    + P  +T + VLSACS    +  G K   S      +
Sbjct: 192 SAYNKVGKFEESRRLFLVMEDKQVLPTTVTLVLVLSACSKLKDLRTG-KKVHSYVKNCKV 250

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +     M+D+    G +  AL   RSM  + D++ W T +      G+ ++ ++  +
Sbjct: 251 ESNLVLENAMIDMYADCGEMDSALGIFRSMN-NRDIISWTTIVSGFTNLGEIDVARNYFD 309

Query: 683 MILEQD 688
            + E+D
Sbjct: 310 KMPEKD 315



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 132/283 (46%), Gaps = 14/283 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++   R ++A+     M      PD  T   +L +C       LG+ + + + R+K++ +
Sbjct: 326 YIRSNRFKEALELFRNMQATNVKPDEFTMVSVLTACAHLGALELGEWIRTYIDRNKIKND 385

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+LI +Y KCGD+++A  IF+ M ++RD  +W++MI      G    A+ MF  ML
Sbjct: 386 LFVRNALIDMYFKCGDVDKAESIFREM-SQRDKFTWTAMIVGLAVNGHGEKALDMFSNML 444

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +    P+E  +  V+ AC++T  V  G   +  +      + ++     L+D+  +    
Sbjct: 445 KASILPDEITYIGVLSACTHTGLVDKGRKYFLRMTSQHGIEPNIAHYGCLVDLLARAG-R 503

Query: 233 LESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR----FTLS 287
           L+ AY+V + M  K N++ W  ++  C ++    D   + +  IL    PD       L 
Sbjct: 504 LKEAYEVIENMPIKANSIVWGALLAGC-RVYRESDMAEMVVKQILE-LEPDNGAVYVLLC 561

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
            + +AC     +   ++L    +  G+      GCSL++M  +
Sbjct: 562 NIYAACKR---WNDLRELRQMMMDKGIK--KTPGCSLIEMNGR 599


>gi|357516765|ref|XP_003628671.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
 gi|355522693|gb|AET03147.1| hypothetical protein MTR_8g063290 [Medicago truncatula]
          Length = 659

 Score =  462 bits (1190), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/624 (39%), Positives = 365/624 (58%), Gaps = 38/624 (6%)

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           KVFD+M+++N V + +MI          D + +F +M+  GF PD +T   V+ ACS  E
Sbjct: 74  KVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSE 133

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G  +H   ++ GL  ++ VG  L+ MY KC   G + ++R+VFD M+  +V+SW +
Sbjct: 134 NLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKC---GCLFEARRVFDEMIWKDVVSWNS 190

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           ++ GY  +  R  +A+++  +M      P+  T AS++ A  N    NV           
Sbjct: 191 MVAGYAHNM-RFDDALEICREMEDYGQKPDGCTMASLMPAVANTSSENV----------- 238

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                         +Y          K F +L  KNL+S+N M+  Y KN    +A +L 
Sbjct: 239 --------------LYVE--------KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLY 276

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            ++E   V   A TFAS+L     + A+  G +IH  + K     N  + N+LI MY+RC
Sbjct: 277 LQMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARC 336

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             ++ A +VF  M+ R+V SWTS+I+ +   G    A+ +F +ML  G  P+ I ++A+L
Sbjct: 337 GCLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAIL 396

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           SACSH+GL+ EG  +F+ M D++ I  R+EHYAC+VDLLGR+G + EA   I+ MP+  +
Sbjct: 397 SACSHSGLLDEGRIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPN 456

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
             VW T L +CRV  + ++G  AA+ +L+  P+    ++LLSN+YA AG W+ V  IR  
Sbjct: 457 ERVWATLLSSCRVFTNMDIGILAADNLLQLAPEQSGYYVLLSNIYAKAGRWKEVTEIRSV 516

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
           MK + + K  G S +E +N+VH F  G+TSHP++ EIY EL  L  K+KE GY+P+T+  
Sbjct: 517 MKRKKIRKTPGISNVELNNQVHTFLAGDTSHPQSKEIYEELGVLVAKMKELGYVPETDSA 576

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
           LH++EEE K  +L  HSEK+A+ F L++T + + IR+ KNLRVCGDCH A K IS +  R
Sbjct: 577 LHDVEEEDKEGHLAVHSEKLAIVFALLNTQEYQ-IRITKNLRVCGDCHIAAKLISKIVER 635

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           EI++RD+NRFHH KDG CSC DYW
Sbjct: 636 EIIVRDTNRFHHFKDGVCSCGDYW 659



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 241/489 (49%), Gaps = 44/489 (8%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L ++ LL K+  ++ +    K +H+++       N  +   L+  Y+ CG+     K+F 
Sbjct: 18  LTSFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIKLMRSYAACGEPGLTRKVFD 77

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M + R++V ++ MI SYVN  +  D + +F EM+  GF P+ Y +  V++ACS +EN+ 
Sbjct: 78  EMSD-RNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLR 136

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G +I+G +LK G  D ++ VG  LI M+ K     E A +VFD+M  K+ V W  M+  
Sbjct: 137 YGLLIHGDVLKVG-LDFNLFVGNGLIAMYGKCGCLFE-ARRVFDEMIWKDVVSWNSMVAG 194

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
                   DA+ +  +M   G  PD  T++ ++ A +     TS + +            
Sbjct: 195 YAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVAN----TSSENV------------ 238

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
                    +Y +           K+F  +   N++SW  +I  Y+++     +AV L+ 
Sbjct: 239 ---------LYVE-----------KIFVNLERKNLISWNVMIRVYMKN-SLPTQAVDLYL 277

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M + +V P+  TFASVL ACG+L    +  +++ +  K+    +  + NSLI MYAR G
Sbjct: 278 QMEKCRVEPDAITFASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARCG 337

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            ++DA++ F+ +  +++ S+ +++ AY        A  L  E+ ++G    +  F ++LS
Sbjct: 338 CLDDAKRVFDRMKFRDVASWTSLISAYGMTGQGCNAVALFTEMLNSGQAPDSIAFVAILS 397

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME-DRN 554
             S  G + +G +I+ + +   +     I  Y  L+ +  R   V+ A+ + K+M  + N
Sbjct: 398 ACSHSGLLDEG-RIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEAYNIIKQMPIEPN 456

Query: 555 VISWTSMIT 563
              W ++++
Sbjct: 457 ERVWATLLS 465



 Score =  171 bits (434), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 197/396 (49%), Gaps = 51/396 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+ R    +     M   G  PD  TY  +LK+C  S N   G L+H  + +  L+ N
Sbjct: 94  YVNNHRYDDGLLVFREMVNGGFRPDNYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFN 153

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N LI++Y KCG L EA ++F  M  K D+VSW+SM++ Y +  +  DA+ +  EM 
Sbjct: 154 LFVGNGLIAMYGKCGCLFEARRVFDEMIWK-DVVSWNSMVAGYAHNMRFDDALEICREME 212

Query: 173 ELGFCPNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           + G  P+    ++++ A +NT  ENV                            ++V+  
Sbjct: 213 DYGQKPDGCTMASLMPAVANTSSENV----------------------------LYVE-- 242

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                  K+F  +  KN + W +MI    +   P  A+ L+L M      PD  T + V+
Sbjct: 243 -------KIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITFASVL 295

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC +L     G+++H +  +  L  ++ +  SL+DMYA+C   G +DD+++VFDRM   
Sbjct: 296 PACGDLSALLLGRRIHEYVEKKKLCPNLLLENSLIDMYARC---GCLDDAKRVFDRMKFR 352

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAE 408
           +V SWT++I+ Y  + G+   AV LF++M+    AP+   F ++L AC +  LLD     
Sbjct: 353 DVASWTSLISAYGMT-GQGCNAVALFTEMLNSGQAPDSIAFVAILSACSHSGLLDEG--- 408

Query: 409 QVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
           ++Y   +     +   + +   L+ +  R+GR+++A
Sbjct: 409 RIYFKQMTDDYRITPRIEHYACLVDLLGRAGRVDEA 444



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 92/372 (24%), Positives = 165/372 (44%), Gaps = 37/372 (9%)

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           D++  K+ +  IQ  +     +F  + KA     D    ++++T         +  +G  
Sbjct: 3   DRDICKIITFFIQQILT----SFGLLAKALDQNPDIKTLKKLHTMIFYLNSHQNPSLGIK 58

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           L+  YA  G     RK F+ + ++N+V YN M+ +Y  N   +    +  E+ + G    
Sbjct: 59  LMRSYAACGEPGLTRKVFDEMSDRNVVFYNVMIRSYVNNHRYDDGLLVFREMVNGGFRPD 118

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            YT+  +L   S    +  G  IH  ++K G + N  + N LI+MY +C  +  A +VF 
Sbjct: 119 NYTYPCVLKACSCSENLRYGLLIHGDVLKVGLDFNLFVGNGLIAMYGKCGCLFEARRVFD 178

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           EM  ++V+SW SM+ G+A +     ALEI  +M   G KP+G T  +++ A ++    SE
Sbjct: 179 EMIWKDVVSWNSMVAGYAHNMRFDDALEICREMEDYGQKPDGCTMASLMPAVANTS--SE 236

Query: 609 GWKHFRSMYDEHGIV----QRMEHYACMVDLLGRSGSLTEALEFIRSMP---LSADVLVW 661
                  +Y E   V    + +  +  M+ +  ++   T+A++    M    +  D + +
Sbjct: 237 N-----VLYVEKIFVNLERKNLISWNVMIRVYMKNSLPTQAVDLYLQMEKCRVEPDAITF 291

Query: 662 RTFLGAC----------RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
            + L AC          R+H   E  K    ++LE           L ++YA  G  +  
Sbjct: 292 ASVLPACGDLSALLLGRRIHEYVEKKKLCPNLLLENS---------LIDMYARCGCLDDA 342

Query: 712 ANIRKRMKERNL 723
             +  RMK R++
Sbjct: 343 KRVFDRMKFRDV 354


>gi|326515658|dbj|BAK07075.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 796

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/793 (33%), Positives = 437/793 (55%), Gaps = 21/793 (2%)

Query: 78  LDTYSLL-LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           LD Y L  L+SC   R+      VH+ + R+   P+  + N+L++ Y + G    A ++ 
Sbjct: 16  LDAYYLHHLRSCSAPRH---AAAVHAHIVRAHPSPSLFLRNTLLAAYCRLG--GHARRLL 70

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTEN 195
             M  + + VS++ +I +Y   G+   ++  F       G   + + ++A + ACS    
Sbjct: 71  DEM-PRTNAVSFNLLIDAYSRAGQPEASLETFARARRSAGVRADRFTYAAALAACSRAGR 129

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++   +  G     V V  +L+ M+ +   D+  A +VFD   E++ V W  ++
Sbjct: 130 LREGKAVHALSVLEG-IAGGVFVSNSLVSMYARCG-DMGQARQVFDAADERDDVSWNALV 187

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC--SELELFTSGKQLHSWAIRTG 313
           +   + G   D +R+F  M  SG   + F L  V+  C  S+  +      +H   ++ G
Sbjct: 188 SGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAGSDDPVMDIAAAVHGCVVKAG 247

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ---SGGRD- 369
              DV +  ++V MYAK    G++ ++  +F  +LD NV+ + A+I G  +   + G D 
Sbjct: 248 FDSDVFLASAMVGMYAK---KGALSEAVALFKSVLDPNVVVFNAMIAGLCRDEAAVGTDV 304

Query: 370 -KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            +EA+ L+S++    + P  FTF+SV++AC    D    +Q++   +K     DD +G++
Sbjct: 305 LREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI +Y  SG MED  + F S+ ++++V++  M+    +N   E+A  L HE+   G+   
Sbjct: 365 LIDLYLNSGCMEDGFRCFTSVPKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKPD 424

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            +T +S+++  +S+     GEQI     KSGF     + N+ I MY+R  +V AA + F+
Sbjct: 425 PFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTAMGNSCIHMYARSGDVHAAVRRFQ 484

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           EME  +++SW+++I+  A+HG A  AL  F +M+   + PN IT++ VL+ACSH GL+ E
Sbjct: 485 EMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGLVDE 544

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           G K++ +M +E+ +   ++H  C+VDLLGR+G L +A  FIR      + ++WR+ L +C
Sbjct: 545 GLKYYETMKEEYALSPTIKHCTCVVDLLGRAGRLADAEAFIRDSIFHDEPVIWRSLLASC 604

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           R+H D E G+  A+ I+E  P   A+++ L N+Y  AG     + IR  MKER + KE G
Sbjct: 605 RIHRDMERGQLVADRIMELQPSSSASYVNLYNIYLDAGELSLASKIRDVMKERGVKKEPG 664

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
            SWIE  + VH F  G+ SHP++  IY++L ++  KI +     D +    +     +  
Sbjct: 665 LSWIELRSGVHSFVAGDKSHPESNAIYSKLAEMLSKIDKL-TATDASSTKSDDTIRNEQS 723

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
           ++  HSEK+AVA GLI   +S PIRV KNLRVC DCH  +K IS    REIVLRD+ RFH
Sbjct: 724 WMNWHSEKLAVALGLIHLPQSAPIRVMKNLRVCRDCHLTMKLISKSEKREIVLRDAIRFH 783

Query: 849 HIKDGKCSCNDYW 861
           H +DG CSC DYW
Sbjct: 784 HFRDGSCSCADYW 796



 Score =  213 bits (541), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 237/444 (53%), Gaps = 15/444 (3%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G   D  TY+  L +C R+     GK VH+L     +     + NSL+S+Y++CGD+ +A
Sbjct: 109 GVRADRFTYAAALAACSRAGRLREGKAVHALSVLEGIAGGVFVSNSLVSMYARCGDMGQA 168

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F +  ++RD VSW++++S YV  G Q D + +F  M   G   N +   +VI+ C+ 
Sbjct: 169 RQVFDA-ADERDDVSWNALVSGYVRAGAQDDMLRVFAMMRRSGIGLNSFALGSVIKCCAG 227

Query: 193 TEN--VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
           +++  + I   ++G ++K G FDSDV +  A++ M+ K    L  A  +F  + + N V 
Sbjct: 228 SDDPVMDIAAAVHGCVVKAG-FDSDVFLASAMVGMYAKKGA-LSEAVALFKSVLDPNVVV 285

Query: 251 WTLMITRCTQ----LGCP--RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +  MI    +    +G    R+A+ L+ ++   G  P  FT S V+ AC+       GKQ
Sbjct: 286 FNAMIAGLCRDEAAVGTDVLREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQ 345

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   ++     D  +G +L+D+Y      G ++D  + F  +   +V++WTA+I+G VQ
Sbjct: 346 IHGQVLKHCFQGDDFIGSALIDLYLN---SGCMEDGFRCFTSVPKQDVVTWTAMISGCVQ 402

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +   ++ A+ LF +++   + P+ FT +SV+ AC +L  +   EQ+   A K G      
Sbjct: 403 NELFER-ALTLFHELLGAGLKPDPFTISSVMNACASLAVARTGEQIQCFATKSGFGRFTA 461

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +GNS I MYARSG +  A + F+ +   ++VS++ ++ ++A++  +  A    +E+ D  
Sbjct: 462 MGNSCIHMYARSGDVHAAVRRFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAK 521

Query: 485 VGTSAYTFASLLSGASSIGAIGKG 508
           V  +  TF  +L+  S  G + +G
Sbjct: 522 VVPNEITFLGVLTACSHGGLVDEG 545



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 70/244 (28%), Positives = 128/244 (52%), Gaps = 3/244 (1%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           +++A+     +  +G  P   T+S ++++C  + +   GK +H  + +   + +  I ++
Sbjct: 305 LREALSLYSEVQSRGMEPTEFTFSSVIRACNLAGDIEFGKQIHGQVLKHCFQGDDFIGSA 364

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           LI LY   G + +  + F S+  K+D+V+W++MIS  V       A+ +F E+L  G  P
Sbjct: 365 LIDLYLNSGCMEDGFRCFTSV-PKQDVVTWTAMISGCVQNELFERALTLFHELLGAGLKP 423

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           + +  S+V+ AC++      G  I  F  K G F     +G + I M+ + S D+ +A +
Sbjct: 424 DPFTISSVMNACASLAVARTGEQIQCFATKSG-FGRFTAMGNSCIHMYAR-SGDVHAAVR 481

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
            F +M   + V W+ +I+   Q GC RDA+R F +M+ +  +P+  T  GV++ACS   L
Sbjct: 482 RFQEMESHDIVSWSAVISSHAQHGCARDALRFFNEMVDAKVVPNEITFLGVLTACSHGGL 541

Query: 299 FTSG 302
              G
Sbjct: 542 VDEG 545


>gi|449461407|ref|XP_004148433.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g33170-like [Cucumis sativus]
          Length = 749

 Score =  462 bits (1189), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/688 (35%), Positives = 406/688 (59%), Gaps = 19/688 (2%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++ C +        +I+G ++K G F  D+ V   L++++ K  V +ESA+KVFD +  
Sbjct: 64  LLQECIDRNLATEARMIHGHIVKTG-FHEDLFVMTFLVNVYSKCGV-MESAHKVFDNLPR 121

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N   WT ++T   Q   P  A++LF+ M+ +G  P  +TL  V++ACS L+    GKQ+
Sbjct: 122 RNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSSLQSIEFGKQV 181

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H++ I+  +  D  +G SL   Y+K      ++ + K F  + + +V+SWT++I+    +
Sbjct: 182 HAYLIKYHIDFDTSIGNSLSSFYSKFR---RLEFAIKAFKIIKEKDVISWTSVISSCCDN 238

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G +   ++  F DM+   + PN +T  SVL AC  +L  ++  Q+++ ++K G      +
Sbjct: 239 G-QAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSILI 297

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN-----------SEKAF 474
            NS++ +Y + G + +A+K FE +   NLV++N M+  +AK ++              A 
Sbjct: 298 KNSIMYLYLKCGWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDDVAAHKSGSTAL 357

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            +  ++  +G+    +TF+S+LS  S++ A+ +GEQIH +IIKSG  ++  +  AL+SMY
Sbjct: 358 AMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLADVVVGTALVSMY 417

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C +++ A + F EM  R +ISWTSMITGFA+HG + +AL++F  M   GIKPN +T++
Sbjct: 418 NKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVGIKPNQVTFV 477

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            VLSACSHAGL  E   +F  M  ++ I   M+H+AC++D+  R G + EA + +  M  
Sbjct: 478 GVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNF 537

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             +  +W   +  CR HG ++LG +AAE +L+  P+D   ++ L N++ SAG W+ V+ +
Sbjct: 538 EPNETIWSMLIAGCRSHGKSDLGFYAAEQLLKLKPKDVETYVSLLNMHISAGRWKDVSKV 597

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP-- 772
           RK MKE  + K    SWI    KV+ F   + SH ++LE+Y  L+ +  ++K  GY P  
Sbjct: 598 RKLMKEEKVGKLKDWSWISIKEKVYSFKPNDKSHCQSLEMYKLLETVLNEVKALGYEPIE 657

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D   +  E  EE+ +     HSEK+A+AFGL++   + PIRV K++ +C DCH  I++IS
Sbjct: 658 DVEVIEKEENEERVLSSTVLHSEKLAIAFGLLNLPTATPIRVVKSITMCRDCHNFIRFIS 717

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           ++ GREIV+RDS + H   +G CSC  Y
Sbjct: 718 LLKGREIVIRDSKQLHKFLNGYCSCGGY 745



 Score =  249 bits (637), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 149/546 (27%), Positives = 285/546 (52%), Gaps = 23/546 (4%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G   +   Y  LL+ CI        +++H  + ++    +  ++  L+++YSKCG +  A
Sbjct: 53  GTRIESSYYFPLLQECIDRNLATEARMIHGHIVKTGFHEDLFVMTFLVNVYSKCGVMESA 112

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
           +K+F ++  +R++ +W+++++ YV     + A+ +F++MLE G  P+ Y    V+ ACS+
Sbjct: 113 HKVFDNL-PRRNVNAWTTLLTGYVQNSHPLLALQLFIKMLEAGAYPSNYTLGIVLNACSS 171

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
            +++  G  ++ +L+K  + D D  +G +L   + K    LE A K F  + EK+ + WT
Sbjct: 172 LQSIEFGKQVHAYLIKY-HIDFDTSIGNSLSSFYSKFR-RLEFAIKAFKIIKEKDVISWT 229

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I+ C   G    ++  F+DM+  G  P+ +TL+ V+SAC  +     G Q+HS +I+ 
Sbjct: 230 SVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKL 289

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY---------- 362
           G    + +  S++ +Y KC   G + +++K+F+ M   N+++W A+I G+          
Sbjct: 290 GYGSSILIKNSIMYLYLKC---GWLIEAQKLFEGMETLNLVTWNAMIAGHAKMMDLAEDD 346

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V +      A+ +F  + +  + P+ FTF+SVL  C NL+     EQ++   +K G   D
Sbjct: 347 VAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVLAD 406

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             VG +L+SMY + G ++ A KAF  +  + ++S+ +M+  +A++  S++A +L  ++  
Sbjct: 407 VVVGTALVSMYNKCGSIDKASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRL 466

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANV 540
            G+  +  TF  +LS  S  G +      +  +++  +     +  +  LI MY R   V
Sbjct: 467 VGIKPNQVTFVGVLSACSHAG-LADEALYYFELMQKQYNIKPVMDHFACLIDMYLRLGRV 525

Query: 541 EAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLS 598
           E AF V  +M  + N   W+ +I G   HG +        ++L   +KP  + TY+++L+
Sbjct: 526 EEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSDLGFYAAEQLLK--LKPKDVETYVSLLN 583

Query: 599 ACSHAG 604
               AG
Sbjct: 584 MHISAG 589



 Score =  196 bits (497), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 131/409 (32%), Positives = 215/409 (52%), Gaps = 26/409 (6%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G +P   T  ++L +C   ++   GK VH+ L +  ++ ++ I NSL S YSK   
Sbjct: 150 MLEAGAYPSNYTLGIVLNACSSLQSIEFGKQVHAYLIKYHIDFDTSIGNSLSSFYSKFRR 209

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A K FK +  K D++SW+S+ISS  + G+   ++  F++ML  G  PNEY  ++V+ 
Sbjct: 210 LEFAIKAFKIIKEK-DVISWTSVISSCCDNGQAARSLSFFMDMLSDGMKPNEYTLTSVLS 268

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC     + +G  I+   +K GY  S + +  +++ +++K    +E A K+F+ M   N 
Sbjct: 269 ACCVMLTLDLGAQIHSLSIKLGY-GSSILIKNSIMYLYLKCGWLIE-AQKLFEGMETLNL 326

Query: 249 VGWTLMIT-RCTQLGCPRD----------AIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           V W  MI      +    D          A+ +F  +  SG  PD FT S V+S CS L 
Sbjct: 327 VTWNAMIAGHAKMMDLAEDDVAAHKSGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLV 386

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G+Q+H   I++G+  DV VG +LV MY KC   GS+D + K F  M    ++SWT+
Sbjct: 387 ALEQGEQIHGQIIKSGVLADVVVGTALVSMYNKC---GSIDKASKAFLEMPSRTMISWTS 443

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV--YTHAV 415
           +ITG+ +  G  ++A++LF DM    + PN  TF  VL AC +   + +A++   Y   +
Sbjct: 444 MITGFARH-GLSQQALQLFEDMRLVGIKPNQVTFVGVLSACSH---AGLADEALYYFELM 499

Query: 416 KRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMV 461
           ++   +   + +   LI MY R GR+E+A      + FE N   ++ ++
Sbjct: 500 QKQYNIKPVMDHFACLIDMYLRLGRVEEAFDVVHKMNFEPNETIWSMLI 548



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 102/337 (30%), Positives = 171/337 (50%), Gaps = 37/337 (10%)

Query: 55  NDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           ++G+  +++ F +D+++  G  P+  T + +L +C       LG  +HSL  +     + 
Sbjct: 237 DNGQAARSLSFFMDMLSD-GMKPNEYTLTSVLSACCVMLTLDLGAQIHSLSIKLGYGSSI 295

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD---------- 163
           +I NS++ LY KCG L EA K+F+ M    ++V+W++MI+ +    K +D          
Sbjct: 296 LIKNSIMYLYLKCGWLIEAQKLFEGM-ETLNLVTWNAMIAGH---AKMMDLAEDDVAAHK 351

Query: 164 ----AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
               A+ MF ++   G  P+ + FS+V+  CSN   +  G  I+G ++K G   +DV VG
Sbjct: 352 SGSTALAMFQKLYRSGMKPDLFTFSSVLSVCSNLVALEQGEQIHGQIIKSGVL-ADVVVG 410

Query: 220 CALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
            AL+ M+ K GS+D   A K F +M  +  + WT MIT   + G  + A++LF DM L G
Sbjct: 411 TALVSMYNKCGSID--KASKAFLEMPSRTMISWTSMITGFARHGLSQQALQLFEDMRLVG 468

Query: 279 FLPDRFTLSGVVSACS-----ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
             P++ T  GV+SACS     +  L+        + I+  +    C    L+DMY +   
Sbjct: 469 IKPNQVTFVGVLSACSHAGLADEALYYFELMQKQYNIKPVMDHFAC----LIDMYLRL-- 522

Query: 334 DGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRD 369
            G V+++  V  +M  + N   W+ +I G    G  D
Sbjct: 523 -GRVEEAFDVVHKMNFEPNETIWSMLIAGCRSHGKSD 558


>gi|359497398|ref|XP_002270940.2| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 640

 Score =  462 bits (1188), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 240/662 (36%), Positives = 378/662 (57%), Gaps = 45/662 (6%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           I+  ++K     ++  +   L  +F   S  DL  A  VFD++   +T  W  MI     
Sbjct: 22  IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSPDTFIWNTMIRAYLN 81

Query: 261 LGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
              P++++ LF  M     +P D ++LS V+ AC  L+   +G++LH+  ++ GL  D+ 
Sbjct: 82  SQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIGLGSDLF 141

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  +L++MYAK    G ++ +R + D M   +++ +  ++  YV+ G             
Sbjct: 142 VETALIEMYAKF---GDIEIARNILDEMAHPDLVPYNVLLAEYVRVG------------- 185

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
                                  + N+A  ++    +R    D    N++I  +A  G +
Sbjct: 186 -----------------------EINLAHDLFDRMPER----DLVSWNTMIHGHASLGDV 218

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             A+K F+   E++L+S+++M+ AYAK   S +A  L HE++   V     T  S+LS  
Sbjct: 219 GTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFHEMQLANVLPDKVTMVSVLSAC 278

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
             +GA+G G+ IH  I ++  E +  +  +L+ MY++C +++ + +VF  M +R+V +W+
Sbjct: 279 GDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKCGDIDNSLRVFNGMNNRDVFAWS 338

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G A HGF   AL+ F KM+++ IKPN +T+I VLSACSH GL+ EGW +F SM   
Sbjct: 339 AMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHIGLVDEGWTYFTSMSKV 398

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           + +  ++EHY C+VD+LGR+G L EA+E I+SMP + D +VWR  LGACR++ + E+ + 
Sbjct: 399 YDVSPKIEHYGCVVDILGRAGRLQEAMELIKSMPFAPDAIVWRALLGACRIYKNVEIAEE 458

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           A   +LE +P     ++LLSN+Y+ A  W+ V N+R+ MK  N+ K  G S IE DN VH
Sbjct: 459 ATVNLLELEPHVDGNYVLLSNIYSQAKEWDKVVNVRRMMKNINIQKVPGSSSIEVDNAVH 518

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F  G+ SHP++ +I   L ++  ++K  GY P T  VL + +E++K   L  HSEK+A+
Sbjct: 519 EFVAGDQSHPESKKILRMLSEITARLKANGYAPLTASVLQDFDEKEKENALAHHSEKLAI 578

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGL+ST+    IR+ KNLRVC DCH AIK IS    R I++RD NRFHH  +G CSC D
Sbjct: 579 AFGLLSTAPGSTIRIVKNLRVCDDCHIAIKLISRTYKRRIIVRDRNRFHHFVNGSCSCKD 638

Query: 860 YW 861
           YW
Sbjct: 639 YW 640



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 210/452 (46%), Gaps = 91/452 (20%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNE---ANKIFKSMGNKRDIVSWSSMISSYV 156
           +H+L+ ++ L+ N+ +L  L+     C   N+   A  +F  + +  D   W++MI +Y+
Sbjct: 22  IHALIIKTSLDGNNFVLAKLLRRLFACSSANDLLYARSVFDEIPSP-DTFIWNTMIRAYL 80

Query: 157 NRGKQVDAIHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           N     +++ +F +M      P + Y  S VI+AC   ++   G  ++  +LK G   SD
Sbjct: 81  NSQNPQESMSLFFQMRHQECIPIDSYSLSLVIQACGRLKDPGNGQKLHTQVLKIG-LGSD 139

Query: 216 VCVGCALIDMFVK--------------------------------GSVDLESAYKVFDKM 243
           + V  ALI+M+ K                                G ++L  A+ +FD+M
Sbjct: 140 LFVETALIEMYAKFGDIEIARNILDEMAHPDLVPYNVLLAEYVRVGEINL--AHDLFDRM 197

Query: 244 TEKNTVGWTLMITRCTQLG------------CPRD-------------------AIRLFL 272
            E++ V W  MI     LG            C RD                   A+RLF 
Sbjct: 198 PERDLVSWNTMIHGHASLGDVGTAKKLFDRTCERDLISWSSMIAAYAKARQSNEALRLFH 257

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           +M L+  LPD+ T+  V+SAC ++     GK +H    R  + +D+ +G SLVDMYAKC 
Sbjct: 258 EMQLANVLPDKVTMVSVLSACGDVGALGMGKMIHECIERNRIEIDLKLGTSLVDMYAKC- 316

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G +D+S +VF+ M + +V +W+A+I G + + G  + A+  FS MI   + PN  TF 
Sbjct: 317 --GDIDNSLRVFNGMNNRDVFAWSAMIMG-LANHGFGELALDHFSKMISEDIKPNDVTFI 373

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALD--------DCVGNSLISMYARSGRMEDARK 444
            VL AC ++    + ++ +T+     +  D         CV    + +  R+GR+++A +
Sbjct: 374 GVLSACSHI---GLVDEGWTYFTSMSKVYDVSPKIEHYGCV----VDILGRAGRLQEAME 426

Query: 445 AFESL-FEKNLVSYNTMVDAYAKNLNSEKAFE 475
             +S+ F  + + +  ++ A     N E A E
Sbjct: 427 LIKSMPFAPDAIVWRALLGACRIYKNVEIAEE 458



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 161/353 (45%), Gaps = 48/353 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G ++ A   LD M     HPDL  Y++LL   +R    +L    H L  R   E + V  
Sbjct: 154 GDIEIARNILDEMA----HPDLVPYNVLLAEYVRVGEINLA---HDLFDRMP-ERDLVSW 205

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N++I  ++  GD+  A K+F     +RD++SWSSMI++Y    +  +A+ +F EM     
Sbjct: 206 NTMIHGHASLGDVGTAKKLFDRTC-ERDLISWSSMIAAYAKARQSNEALRLFHEMQLANV 264

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++    +V+ AC +   + +G +I+  + +    + D+ +G +L+DM+ K   D++++
Sbjct: 265 LPDKVTMVSVLSACGDVGALGMGKMIHECIER-NRIEIDLKLGTSLVDMYAKCG-DIDNS 322

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF+ M  ++   W+ MI      G    A+  F  MI     P+  T  GV+SACS +
Sbjct: 323 LRVFNGMNNRDVFAWSAMIMGLANHGFGELALDHFSKMISEDIKPNDVTFIGVLSACSHI 382

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L   G     W   T ++        + D+  K    G V D                 
Sbjct: 383 GLVDEG-----WTYFTSMS-------KVYDVSPKIEHYGCVVD----------------- 413

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             I G     GR +EA++L   M     AP+   + ++L AC    +  +AE+
Sbjct: 414 --ILG---RAGRLQEAMELIKSM---PFAPDAIVWRALLGACRIYKNVEIAEE 458


>gi|302807997|ref|XP_002985693.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
 gi|300146602|gb|EFJ13271.1| hypothetical protein SELMODRAFT_122934 [Selaginella moellendorffii]
          Length = 706

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 244/678 (35%), Positives = 394/678 (58%), Gaps = 13/678 (1%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           VI++C+    +A G  I+  + + G   SDV V   L+ M+ K GS  LE A  VF+   
Sbjct: 40  VIQSCARLGALAEGRRIHQLIRRVG-LGSDVYVSNHLVMMYGKCGS--LEEARLVFEATP 96

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE-LELFTSGK 303
            KN   WT++IT C Q G  ++A+ LF +M+  G  P   + +  ++ACS   E   +G+
Sbjct: 97  AKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGR 156

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            LH+   R G    V    SLV MY+KC   GS+++S K F+ M + N +SW A+I  + 
Sbjct: 157 ALHALLRRYGFQDAVVATTSLVSMYSKC---GSLEESVKTFESMTELNAVSWNAMIAAFA 213

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           +   R  EA++    M    +     T+ +++ A      S +    Y H        D 
Sbjct: 214 EHR-RGLEALRTLQKMFLEGIRACSVTYITLMSAYDQ--PSQLKSARYIHDCILRTGFDQ 270

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N +++MY + G ++DA   F+S+ + +++++NTM+ AY+++ ++ +A      +++ 
Sbjct: 271 DVVNVILNMYGKCGCLQDAEAMFKSMSQPDVIAWNTMIAAYSQHGHTSEALRFYELMQEE 330

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           GV    YT+ S++   +++G +  G+Q+H R+    F+    + N+L++MY +C  ++ A
Sbjct: 331 GVVPDDYTYVSVIDACATLGDMEVGKQVHRRLGDRAFQVTE-LANSLVNMYGKCGILDVA 389

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
             +F +   +  ++W +MI  +A+H    +A E+F  M  DG +P+ IT+++VLSAC++A
Sbjct: 390 RSIFDKTA-KGSVTWNAMIGAYAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANA 448

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL  E   +F  M  +HG+     HY CMV+ LG++G L++A   I+ MP   DVL W +
Sbjct: 449 GLPEEAHSYFVCMQQDHGVRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTS 508

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
           FL  CR HGD + GK AA+  +  DP+    ++ L+ ++A AG ++  + IRK M +R +
Sbjct: 509 FLANCRSHGDMKRGKFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDRGI 568

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K AG S I+    V++F  G+ S+P++ EI+ EL +L  ++K  GY PD   V H++E 
Sbjct: 569 RKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKRAGYDPDMTHVAHDVEA 628

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
            QK   LF HSE++A+AFG+ISTS+  P+R+ KNLRVCGDCH   K  S +T REI++RD
Sbjct: 629 GQKEPLLFAHSERLAIAFGIISTSQGTPLRIMKNLRVCGDCHAMTKLTSKITRREIIVRD 688

Query: 844 SNRFHHIKDGKCSCNDYW 861
           SNRFHH K+G CSC D+W
Sbjct: 689 SNRFHHFKNGSCSCKDFW 706



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 169/584 (28%), Positives = 276/584 (47%), Gaps = 35/584 (5%)

Query: 46  LSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT 105
           LS  L      G++  AI  L    QK    DL     +++SC R      G+ +H L+ 
Sbjct: 6   LSTLLSKRQQLGQIAAAIDAL----QKRKDADLKECVRVIQSCARLGALAEGRRIHQLIR 61

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           R  L  +  + N L+ +Y KCG L EA  +F++   K ++ SW+ +I+     G+  +A+
Sbjct: 62  RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAK-NVFSWTILITVCAQHGRSQEAL 120

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACS-NTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
            +F EML+ G  P+   F+A I ACS   E +  G  ++  L + G+ D+ V    +L+ 
Sbjct: 121 ALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDA-VVATTSLVS 179

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           M+ K GS  LE + K F+ MTE N V W  MI    +     +A+R    M L G     
Sbjct: 180 MYSKCGS--LEESVKTFESMTELNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEGIRACS 237

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            T   ++SA  +     S + +H   +RTG   DV     +++MY KC   G + D+  +
Sbjct: 238 VTYITLMSAYDQPSQLKSARYIHDCILRTGFDQDVV--NVILNMYGKC---GCLQDAEAM 292

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F  M   +V++W  +I  Y Q  G   EA++ +  M +  V P+ +T+ SV+ AC  L D
Sbjct: 293 FKSMSQPDVIAWNTMIAAYSQH-GHTSEALRFYELMQEEGVVPDDYTYVSVIDACATLGD 351

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
             V +QV+     R   + + + NSL++MY + G ++ AR  F+    K  V++N M+ A
Sbjct: 352 MEVGKQVHRRLGDRAFQVTE-LANSLVNMYGKCGILDVARSIFDKT-AKGSVTWNAMIGA 409

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII----KSG 519
           YA++ + ++AFEL   +   G   S  TF S+LS  ++ G     E+ H+  +      G
Sbjct: 410 YAQHSHEQQAFELFLLMRLDGEEPSYITFMSVLSACANAGL---PEEAHSYFVCMQQDHG 466

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIF 578
                  Y  ++    +   +  A  + + M  + +V++WTS +     HG   R     
Sbjct: 467 VRPGGGHYGCMVESLGKAGRLSDAEALIQGMPFEPDVLTWTSFLANCRSHGDMKRG---- 522

Query: 579 YKMLADG---IKPNGIT-YIAVLSACSHAGLISEGWKHFRSMYD 618
            K  A G   I P   T Y+A+    + AG   E  +  + M D
Sbjct: 523 -KFAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLD 565


>gi|34365551|gb|AAQ65087.1| At4g14850 [Arabidopsis thaliana]
          Length = 634

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 245/630 (38%), Positives = 359/630 (56%), Gaps = 6/630 (0%)

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           ESA  V      +N V WT +I+   Q G    A+  F +M   G +P+ FT      A 
Sbjct: 9   ESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAV 68

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + L L  +GKQ+H+ A++ G  LDV VGCS  DMY K  +    DD+RK+FD + + N+ 
Sbjct: 69  ASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR---DDARKLFDEIPERNLE 125

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           +W A I+  V + GR +EA++ F +  +    PN  TF + L AC + L  N+  Q++  
Sbjct: 126 TWNAFISNSV-TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGL 184

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            ++ G   D  V N LI  Y +  ++  +   F  +  KN VS+ ++V AY +N   EKA
Sbjct: 185 VLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKA 244

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             L        V TS +  +S+LS  + +  +  G  IHA  +K+  E    + +AL+ M
Sbjct: 245 SVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDM 304

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI--KPNGI 591
           Y +C  +E + Q F EM ++N+++  S+I G+A  G    AL +F +M   G    PN +
Sbjct: 305 YGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYM 364

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++++LSACS AG +  G K F SM   +GI    EHY+C+VD+LGR+G +  A EFI+ 
Sbjct: 365 TFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKK 424

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+   + VW     ACR+HG  +LG  AAE + + DP+D   H+LLSN +A+AG W   
Sbjct: 425 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLSNTFAAAGRWAEA 484

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
             +R+ +K   + K AG SWI   N+VH F   + SH    EI   L +L  +++  GY 
Sbjct: 485 NTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLAKLRNEMEAAGYK 544

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PD    L++LEEE+K   +  HSEK+A+AFGL+S   S PIR+ KNLR+CGDCH+  K++
Sbjct: 545 PDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLRICGDCHSFFKFV 604

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S    REI++RD+NRFH  KDG CSC DYW
Sbjct: 605 SGSVKREIIVRDNNRFHRFKDGICSCKDYW 634



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 140/452 (30%), Positives = 222/452 (49%), Gaps = 11/452 (2%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YSK  D  E+ ++   +   R++VSW+S+IS     G    A+  F EM   G  PN++
Sbjct: 1   MYSKL-DHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDF 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F    +A ++      G  I+   +KCG    DV VGC+  DM+ K  +  + A K+FD
Sbjct: 60  TFPCAFKAVASLRLPVTGKQIHALAVKCGRI-LDVFVGCSAFDMYCKTRLR-DDARKLFD 117

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           ++ E+N   W   I+     G PR+AI  F++       P+  T    ++ACS+      
Sbjct: 118 EIPERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNL 177

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G QLH   +R+G   DV V   L+D Y KC     +  S  +F  M   N +SW +++  
Sbjct: 178 GMQLHGLVLRSGFDTDVSVCNGLIDFYGKCK---QIRSSEIIFTEMGTKNAVSWCSLVAA 234

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           YVQ+   D++A  L+    +  V  + F  +SVL AC  +    +   ++ HAVK     
Sbjct: 235 YVQN-HEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVER 293

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              VG++L+ MY + G +ED+ +AF+ + EKNLV+ N+++  YA     + A  L  E+ 
Sbjct: 294 TIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMA 353

Query: 482 DTGVGTSA--YTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCA 538
             G G +    TF SLLS  S  GA+  G +I   +  + G E     Y+ ++ M  R  
Sbjct: 354 PRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAG 413

Query: 539 NVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG 569
            VE A++  K+M  +  IS W ++      HG
Sbjct: 414 MVERAYEFIKKMPIQPTISVWGALQNACRMHG 445



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 190/395 (48%), Gaps = 18/395 (4%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G    A+     M ++G  P+  T+    K+    R    GK +H+L  +     +  
Sbjct: 35  QNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVF 94

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  S   +Y K    ++A K+F  +  +R++ +W++ IS+ V  G+  +AI  F+E   +
Sbjct: 95  VGCSAFDMYCKTRLRDDARKLFDEI-PERNLETWNAFISNSVTDGRPREAIEAFIEFRRI 153

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              PN   F A + ACS+  ++ +G  ++G +L+ G FD+DV V   LID + K    + 
Sbjct: 154 DGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSG-FDTDVSVCNGLIDFYGKCK-QIR 211

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           S+  +F +M  KN V W  ++    Q      A  L+L           F +S V+SAC+
Sbjct: 212 SSEIIFTEMGTKNAVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACA 271

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            +     G+ +H+ A++  +   + VG +LVDMY KC   G ++DS + FD M + N+++
Sbjct: 272 GMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKC---GCIEDSEQAFDEMPEKNLVT 328

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVA--PNHFTFASVLKACGNLLDSNVAEQVY- 411
             ++I GY   G  D  A+ LF +M        PN+ TF S+L AC          +++ 
Sbjct: 329 RNSLIGGYAHQGQVDM-ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFD 387

Query: 412 ----THAVKRGRALDDCVGNSLISMYARSGRMEDA 442
               T+ ++ G     C+    + M  R+G +E A
Sbjct: 388 SMRSTYGIEPGAEHYSCI----VDMLGRAGMVERA 418



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 24/377 (6%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + DGR ++AI       +   HP+  T+   L +C    + +LG  +H L+ RS  + + 
Sbjct: 135 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 194

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + N LI  Y KC  +  +  IF  MG K + VSW S++++YV   +   A  +++   +
Sbjct: 195 SVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRK 253

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
                +++  S+V+ AC+    + +G  I+   +K    +  + VG AL+DM+ K    +
Sbjct: 254 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK-ACVERTIFVGSALVDMYGKCGC-I 311

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF--LPDRFTLSGVVS 291
           E + + FD+M EKN V    +I      G    A+ LF +M   G    P+  T   ++S
Sbjct: 312 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 371

Query: 292 ACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ACS      +G ++      ++ I  G     C+    VDM  +    G V+ + +   +
Sbjct: 372 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI----VDMLGRA---GMVERAYEFIKK 424

Query: 347 MLDHNVMSWTAIITGYVQSGGRDK----EAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           M     +S    +    +  G+ +     A  LF   +  + + NH   ++   A G   
Sbjct: 425 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK--LDPKDSGNHVLLSNTFAAAGRWA 482

Query: 403 DSN-VAEQVYTHAVKRG 418
           ++N V E++    +K+G
Sbjct: 483 EANTVREELKGVGIKKG 499



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 52/194 (26%), Positives = 87/194 (44%), Gaps = 7/194 (3%)

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MY++    E AR        +N+VS+ +++   A+N +   A     E+   GV  + +T
Sbjct: 1   MYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFT 60

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           F       +S+     G+QIHA  +K G   +  +  +   MY +    + A ++F E+ 
Sbjct: 61  FPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLRDDARKLFDEIP 120

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           +RN+ +W + I+     G    A+E F +       PN IT+ A L+ACS        W 
Sbjct: 121 ERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSD-------WL 173

Query: 612 HFRSMYDEHGIVQR 625
           H       HG+V R
Sbjct: 174 HLNLGMQLHGLVLR 187


>gi|297844454|ref|XP_002890108.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335950|gb|EFH66367.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 866

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 268/805 (33%), Positives = 453/805 (56%), Gaps = 11/805 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G++++A+  L+ M +     D D +  L++ C   R    G  V+S+   S    +  +
Sbjct: 72  NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAHEEGSKVYSVALSSMNSLSVEL 131

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+ ++++ + G+L +A  +F  M ++R++ SW+ ++  Y  +G   +AI ++  ML +G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKM-SERNLFSWNVLVGGYAKQGYFDEAICLYHRMLWVG 190

Query: 176 FC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+ Y F  V+R C    ++A G  ++  +++ GY + D+ V  ALI M+VK   D++
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGREVHVHVVRYGY-ELDIDVVNALITMYVKCG-DVK 248

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           SA  +FD+M  ++ + W  MI+   + G   + ++LF  M      PD  TL+ V+SAC 
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMGHEGLKLFFAMRGLSVDPDLMTLTSVISACE 308

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L     G+ +H++ I TG A+D+ V  SL  MY      GS  ++ K+F RM   +++S
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLYA---GSWREAEKLFSRMDCKDIVS 365

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WT +I+GY +     ++A+  +  M Q  V P+  T A+VL AC  L D +   +++  A
Sbjct: 366 WTTMISGY-EYNFLPEKAIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K        V N+LI+MY++   ++ A   F ++  KN++S+ +++     N    +A 
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               +++ T +  +A T  + L+  + IGA+  G++IHA ++++G   +  + NAL+ MY
Sbjct: 485 IFFRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            RC  +  A+  F   + ++V SW  ++TG+++ G  +  +E+F +M+   ++P+ IT+I
Sbjct: 544 VRCGRMNIAWNQFNS-QKKDVSSWNILLTGYSERGQGSVVVELFDRMVKARVRPDEITFI 602

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L  C  + ++ +G  +F  M +E+G+   ++HYAC+VDLLGR+G L EA +FI+ MP+
Sbjct: 603 SLLCGCGKSQMVRQGLMYFSKM-EEYGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 661

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
           + D  VW   L ACR+H + +LG+ +A+ I E D      +ILL NLYA  G W  VA +
Sbjct: 662 TPDPAVWGALLNACRIHHNIDLGELSAQRIFELDKGSVGYYILLCNLYADCGKWREVAKV 721

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R+ MKE  L  +AGCSW+E   KVH F   +  HP+T EI   LD    K+ E G    +
Sbjct: 722 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLDGFYEKMSEVGLTTSS 781

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
                +  E  + +    HSE+ A+AFGLI++    PI V KNL +C  CH  +K+IS  
Sbjct: 782 ESSSMDETEISRDEIFCGHSERKAIAFGLINSVPGMPIWVTKNLNMCESCHDTVKFISKT 841

Query: 835 TGREIVLRDSNRFHHIKDGKCSCND 859
             REI +RDS  FHH KDG+CSC D
Sbjct: 842 VRREISVRDSEHFHHFKDGECSCGD 866


>gi|15223099|ref|NP_172286.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08070
 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15 [Arabidopsis thaliana]
 gi|332190118|gb|AEE28239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 741

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/661 (37%), Positives = 382/661 (57%), Gaps = 35/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF  + E N + W  M         P  A++L++ MI  G LP+ +T   V+ +
Sbjct: 84  LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ + F  G+Q+H   ++ G  LD+ V  SL+ MY +   +G ++D+ KVFD+    +V
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ---NGRLEDAHKVFDKSPHRDV 200

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
           +S+TA+I GY   G                              G  KEA++LF DM++ 
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V P+  T  +V+ AC       +  QV+      G   +  + N+LI +Y++ G +E A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              FE L  K+++S+NT++  Y      ++A  L  E+  +G   +  T  S+L   + +
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380

Query: 503 GAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           GAI  G  IH  I K   G  +   +  +LI MY++C ++EAA QVF  +  +++ SW +
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI GFA HG A  + ++F +M   GI+P+ IT++ +LSACSH+G++  G   FR+M  ++
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            +  ++EHY CM+DLLG SG   EA E I  M +  D ++W + L AC++HG+ ELG+  
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE +++ +P++P +++LLSN+YASAG W  VA  R  + ++ + K  GCS IE D+ VH+
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F +G+  HP+  EIY  L+++ + +++ G++PDT+ VL E+EEE K   L  HSEK+A+A
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 680

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLIST     + + KNLRVC +CH A K IS +  REI+ RD  RFHH +DG CSCNDY
Sbjct: 681 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 740

Query: 861 W 861
           W
Sbjct: 741 W 741



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 250/517 (48%), Gaps = 70/517 (13%)

Query: 30  PSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           PSSS PF   P++S+P  + +                       NHP L     LL +C 
Sbjct: 11  PSSSYPFHFLPSSSDPPYDSI----------------------RNHPSLS----LLHNC- 43

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS---LYSKCGDLNEANKIFKSMGNKRDIV 146
             +     +++H+ + +  L   +  L+ LI    L      L  A  +FK++  + +++
Sbjct: 44  --KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI-QEPNLL 100

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
            W++M   +      V A+ ++V M+ LG  PN Y F  V+++C+ ++    G  I+G +
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160

Query: 207 LKCGYFDSDVCVGCALIDMFVK-GSVD-----------------------------LESA 236
           LK G  D D+ V  +LI M+V+ G ++                             +E+A
Sbjct: 161 LKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+FD++  K+ V W  MI+   + G  ++A+ LF DM+ +   PD  T+  VVSAC++ 
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+Q+H W    G   ++ +  +L+D+Y+KC   G ++ +  +F+R+   +V+SW 
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC---GELETACGLFERLPYKDVISWN 336

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I GY       KEA+ LF +M++    PN  T  S+L AC +L   ++   ++ +  K
Sbjct: 337 TLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395

Query: 417 RGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           R + + +   +  SLI MYA+ G +E A + F S+  K+L S+N M+  +A +  ++ +F
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +L   +   G+     TF  LLS  S  G +  G  I
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492


>gi|326519098|dbj|BAJ96548.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 624

 Score =  461 bits (1187), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 229/591 (38%), Positives = 362/591 (61%), Gaps = 6/591 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD++ +G L P        ++AC++ +     +++H+    +  A D  +  SL+ +Y K
Sbjct: 39  LDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GSV ++RKVFD M   +++SWT++I GY Q+    +EA+ L   M++G+  PN FT
Sbjct: 99  C---GSVLEARKVFDEMRRKDMVSWTSLIAGYAQND-MPEEAIGLLPGMLKGRFKPNGFT 154

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FAS+LKA G   DS +  Q++  AVK     D  VG++L+ MYAR G M+ A   F+ L 
Sbjct: 155 FASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARCGMMDMATAVFDKLD 214

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            KN VS+N ++  +A+  + E A     E+   G   + +T++S+ S  + +GA+ +G+ 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA +IKS  +      N L+ MY++  ++  A +VF  ++D+++++W +M+T FA++G 
Sbjct: 275 VHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDDKDLVTWNTMLTAFAQYGL 334

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+  F +M   GI  N +T++ +L+ACSH GL+ EG ++F  M  E+ +   ++H+ 
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRYF-EMMKEYDLEPEIDHFV 393

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
            +V LLGR+G L  AL FI  MP+     VW   L ACR+H + ++G+ AA+ + E DP 
Sbjct: 394 TVVALLGRAGLLNFALVFIFKMPIEPTAAVWGALLAACRMHKNAKVGQFAADHVFELDPD 453

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D    +LL N+YAS G W+  A +R+ MK   + KE  CSW+E +N VH F   + +HP+
Sbjct: 454 DSGPPVLLYNIYASTGQWDAAARVRRIMKTTGVKKEPACSWVEMENSVHMFVANDDTHPR 513

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             EIY    Q++ KI++ GY+PD ++VL  ++++++   L  HSEK+A+AF LI      
Sbjct: 514 AEEIYKMWGQISKKIRKEGYVPDMDYVLLRVDDQEREANLQYHSEKLALAFALIEMPAGA 573

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IR+ KN+R+CGDCH+A KYIS V GREIV+RD+NRFHH  +G CSC DYW
Sbjct: 574 TIRIMKNIRICGDCHSAFKYISKVFGREIVVRDTNRFHHFSNGSCSCADYW 624



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/336 (34%), Positives = 187/336 (55%), Gaps = 9/336 (2%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           LDL+      P    Y   + +C +S+N    + VH+ L  S+   ++ + NSLI LY K
Sbjct: 39  LDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CG + EA K+F  M  ++D+VSW+S+I+ Y       +AI +   ML+  F PN + F++
Sbjct: 99  CGSVLEARKVFDEM-RRKDMVSWTSLIAGYAQNDMPEEAIGLLPGMLKGRFKPNGFTFAS 157

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           +++A     +  IG  I+   +KC + + DV VG AL+DM+ + G +D+ +A  VFDK+ 
Sbjct: 158 LLKAAGAHADSGIGRQIHALAVKCDWHE-DVYVGSALLDMYARCGMMDMATA--VFDKLD 214

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            KN V W  +I+   + G    A+  F +M+ +GF    FT S V S+ + L     GK 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKW 274

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  I++   +    G +L+DMYAK    GS+ D+RKVFDR+ D ++++W  ++T + Q
Sbjct: 275 VHAHMIKSRQKMTAFAGNTLLDMYAK---SGSMIDARKVFDRVDDKDLVTWNTMLTAFAQ 331

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
             G  KEAV  F +M +  +  N  TF  +L AC +
Sbjct: 332 Y-GLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSH 366



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 219/450 (48%), Gaps = 43/450 (9%)

Query: 153 SSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           S+  N      A+   +++L+ G   P    +   I AC+ ++N+     ++  L     
Sbjct: 23  STAANPVPAASAVLRDLDLLDAGELAPTPRVYHTFITACAQSKNLEDARKVHAHL-ASSR 81

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F  D  +  +LI ++ K    LE A KVFD+M  K+ V WT +I    Q   P +AI L 
Sbjct: 82  FAGDAFLDNSLIHLYCKCGSVLE-ARKVFDEMRRKDMVSWTSLIAGYAQNDMPEEAIGLL 140

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
             M+   F P+ FT + ++ A         G+Q+H+ A++     DV VG +L+DMYA+C
Sbjct: 141 PGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSALLDMYARC 200

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +D +  VFD++   N +SW A+I+G+ + G   + A+  F++M++      HFT+
Sbjct: 201 ---GMMDMATAVFDKLDSKNGVSWNALISGFARKGD-GETALMTFAEMLRNGFEATHFTY 256

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           +SV  +   L      + V+ H +K  + +    GN+L+ MYA+SG M DARK F+ + +
Sbjct: 257 SSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAGNTLLDMYAKSGSMIDARKVFDRVDD 316

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           K+LV++NTM+ A+A+    ++A     E+  +G+  +  TF  +L+  S  G + +G++ 
Sbjct: 317 KDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLVKEGKRY 376

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGF 570
                                           F++ KE + +  +  + +++    + G 
Sbjct: 377 --------------------------------FEMMKEYDLEPEIDHFVTVVALLGRAGL 404

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSAC 600
              AL   +KM    I+P    + A+L+AC
Sbjct: 405 LNFALVFIFKM---PIEPTAAVWGALLAAC 431



 Score =  106 bits (264), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 66/245 (26%), Positives = 126/245 (51%), Gaps = 3/245 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++AI  L  M +    P+  T++ LLK+     +  +G+ +H+L  +     +  + ++L
Sbjct: 134 EEAIGLLPGMLKGRFKPNGFTFASLLKAAGAHADSGIGRQIHALAVKCDWHEDVYVGSAL 193

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + +Y++CG ++ A  +F  + +K   VSW+++IS +  +G    A+  F EML  GF   
Sbjct: 194 LDMYARCGMMDMATAVFDKLDSKNG-VSWNALISGFARKGDGETALMTFAEMLRNGFEAT 252

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
            + +S+V  + +    +  G  ++  ++K          G  L+DM+ K S  +  A KV
Sbjct: 253 HFTYSSVFSSIARLGALEQGKWVHAHMIKSRQ-KMTAFAGNTLLDMYAK-SGSMIDARKV 310

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FD++ +K+ V W  M+T   Q G  ++A+  F +M  SG   ++ T   +++ACS   L 
Sbjct: 311 FDRVDDKDLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQVTFLCILTACSHGGLV 370

Query: 300 TSGKQ 304
             GK+
Sbjct: 371 KEGKR 375



 Score = 71.2 bits (173), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 39/136 (28%), Positives = 73/136 (53%), Gaps = 1/136 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  + A+ T   M + G      TYS +  S  R      GK VH+ + +S+ +  +   
Sbjct: 232 GDGETALMTFAEMLRNGFEATHFTYSSVFSSIARLGALEQGKWVHAHMIKSRQKMTAFAG 291

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+ +Y+K G + +A K+F  + +K D+V+W++M++++   G   +A+  F EM + G 
Sbjct: 292 NTLLDMYAKSGSMIDARKVFDRVDDK-DLVTWNTMLTAFAQYGLGKEAVSHFEEMRKSGI 350

Query: 177 CPNEYCFSAVIRACSN 192
             N+  F  ++ ACS+
Sbjct: 351 YLNQVTFLCILTACSH 366


>gi|356567494|ref|XP_003551954.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 259/649 (39%), Positives = 382/649 (58%), Gaps = 16/649 (2%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI+ + K S+ +  A +VFD++ + + V +  +I      G  R A+RLF ++    F  
Sbjct: 81  LINAYAKHSL-IHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFGL 139

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D FTLSGV+ AC +       +QLH + +  G      V  +++  Y++    G ++++R
Sbjct: 140 DGFTLSGVIIACGDDVGLV--RQLHCFVVVCGYDCYASVNNAVLACYSR---KGFLNEAR 194

Query: 342 KVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           +VF  M +    + +SW A+I    Q      EAV+LF +M++  +  + FT ASVL A 
Sbjct: 195 RVFREMGEGGGRDEVSWNAMIVACGQHR-EGLEAVELFREMVRRGLKVDMFTMASVLTAF 253

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR-SGRMEDARKAFESLFEKNLVSY 457
             + D     Q +   +K G   +  VG+ LI +Y++ +G M + RK FE +   +LV +
Sbjct: 254 TCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIAAPDLVLW 313

Query: 458 NTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           NTM+  +++  + SE       E++  G      +F  + S  S++ +   G+Q+HA  I
Sbjct: 314 NTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAI 373

Query: 517 KSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           KS    N   + NAL++MYS+C NV  A +VF  M + N++S  SMI G+A+HG    +L
Sbjct: 374 KSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIAGYAQHGVEVESL 433

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
            +F  ML   I PN IT+IAVLSAC H G + EG K+F  M +   I    EHY+CM+DL
Sbjct: 434 RLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDL 493

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           LGR+G L EA   I +MP +   + W T LGACR HG+ EL   AA   L+ +P + A +
Sbjct: 494 LGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQLEPYNAAPY 553

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           ++LSN+YASA  WE  A +++ M+ER + K+ GCSWIE D KVH F   +TSHP   EI+
Sbjct: 554 VMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIH 613

Query: 756 AELDQLALKIKEFGYLPDTNFVL---HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
             + ++  K+K+ GY+PD  + L    E+E ++K + L  HSEK+AVAFGLIST +  PI
Sbjct: 614 VYMGEILRKMKQAGYVPDIRWALVKDEEVEPDEKERRLLYHSEKLAVAFGLISTEEWVPI 673

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V KNLR+CGDCH AIK IS +TGREI +RD++RFH  K+G CSC DYW
Sbjct: 674 LVVKNLRICGDCHNAIKLISAITGREITVRDTHRFHCFKEGHCSCGDYW 722



 Score =  223 bits (568), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 151/547 (27%), Positives = 276/547 (50%), Gaps = 51/547 (9%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
            L T+  LLK+CI  R+   GK +H+L  +S + P++ + N    LYSKCG L+ A   F
Sbjct: 8   QLQTFRNLLKACIAQRDLITGKTLHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF 67

Query: 137 -----------KSMGN-------------------KRDIVSWSSMISSYVNRGKQVDAIH 166
                       ++ N                   + DIVS++++I++Y +RG+   A+ 
Sbjct: 68  DLTQYPNVFSYNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALR 127

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F E+ EL F  + +  S VI AC +  +V +   ++ F++ CGY D    V  A++  +
Sbjct: 128 LFAEVRELRFGLDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGY-DCYASVNNAVLACY 184

Query: 227 VKGSVDLESAYKVFDKMTE---KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            +    L  A +VF +M E   ++ V W  MI  C Q     +A+ LF +M+  G   D 
Sbjct: 185 SRKGF-LNEARRVFREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDM 243

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           FT++ V++A + ++    G Q H   I++G   +  VG  L+D+Y+KC   G + + RKV
Sbjct: 244 FTMASVLTAFTCVKDLVGGMQFHGMMIKSGFHGNSHVGSGLIDLYSKCA--GGMVECRKV 301

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F+ +   +++ W  +I+G+ Q     ++ +  F +M      P+  +F  V  AC NL  
Sbjct: 302 FEEIAAPDLVLWNTMISGFSQYEDLSEDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSS 361

Query: 404 SNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
            +V +QV+  A+K     +   V N+L++MY++ G + DAR+ F+++ E N+VS N+M+ 
Sbjct: 362 PSVGKQVHALAIKSDIPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNMVSLNSMIA 421

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF-- 520
            YA++    ++  L   +    +  +  TF ++LS     G + +G++ +  ++K  F  
Sbjct: 422 GYAQHGVEVESLRLFELMLQKDIAPNTITFIAVLSACVHTGKVEEGQK-YFNMMKERFRI 480

Query: 521 --ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARA 574
             E+ H  Y+ +I +  R   ++ A ++ + M  +   I W +++    KHG    A +A
Sbjct: 481 EPEAEH--YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKA 538

Query: 575 LEIFYKM 581
              F ++
Sbjct: 539 ANEFLQL 545



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 123/243 (50%), Gaps = 8/243 (3%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+LI+ YA+   +  AR+ F+ + + ++VSYNT++ AYA       A  L  E+ +   G
Sbjct: 79  NTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRFG 138

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              +T + ++        +G   Q+H  ++  G++    + NA+++ YSR   +  A +V
Sbjct: 139 LDGFTLSGVIIACGD--DVGLVRQLHCFVVVCGYDCYASVNNAVLACYSRKGFLNEARRV 196

Query: 547 FKEMED---RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
           F+EM +   R+ +SW +MI    +H     A+E+F +M+  G+K +  T  +VL+A +  
Sbjct: 197 FREMGEGGGRDEVSWNAMIVACGQHREGLEAVELFREMVRRGLKVDMFTMASVLTAFTCV 256

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR-SGSLTEALEFIRSMPLSADVLVWR 662
             +  G + F  M  + G        + ++DL  + +G + E  +    +  + D+++W 
Sbjct: 257 KDLVGGMQ-FHGMMIKSGFHGNSHVGSGLIDLYSKCAGGMVECRKVFEEIA-APDLVLWN 314

Query: 663 TFL 665
           T +
Sbjct: 315 TMI 317



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 107/205 (52%), Gaps = 4/205 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNS 118
           +  I+    M   G HPD  ++  +  +C    +  +GK VH+L  +S +  N V + N+
Sbjct: 328 EDGIWCFREMQHNGFHPDDCSFVCVTSACSNLSSPSVGKQVHALAIKSDIPYNRVSVNNA 387

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+++YSKCG++++A ++F +M  + ++VS +SMI+ Y   G +V+++ +F  ML+    P
Sbjct: 388 LVAMYSKCGNVHDARRVFDTM-PEHNMVSLNSMIAGYAQHGVEVESLRLFELMLQKDIAP 446

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N   F AV+ AC +T  V  G   +  + +    + +      +ID+  +    L+ A +
Sbjct: 447 NTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLGRAG-KLKEAER 505

Query: 239 VFDKMT-EKNTVGWTLMITRCTQLG 262
           + + M     ++ W  ++  C + G
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHG 530



 Score = 47.8 bits (112), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 44/178 (24%), Positives = 72/178 (40%), Gaps = 40/178 (22%)

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           YN LI+ Y++ + +  A QVF E+   +++S+ ++I  +A  G    AL +F ++     
Sbjct: 78  YNTLINAYAKHSLIHLARQVFDEIPQPDIVSYNTLIAAYADRGECRPALRLFAEVRELRF 137

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG--------- 637
             +G T   V+ AC                 D+ G+V+++    C V + G         
Sbjct: 138 GLDGFTLSGVIIACG----------------DDVGLVRQLH---CFVVVCGYDCYASVNN 178

Query: 638 -------RSGSLTEALEFIRSMPLSA--DVLVWRTFLGACRVHGDTELGKHAAEMILE 686
                  R G L EA    R M      D + W   + AC  H +   G  A E+  E
Sbjct: 179 AVLACYSRKGFLNEARRVFREMGEGGGRDEVSWNAMIVACGQHRE---GLEAVELFRE 233



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 26/110 (23%), Positives = 54/110 (49%), Gaps = 1/110 (0%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT-RSKLEPNSVILNSLISLYS 124
            +LM QK   P+  T+  +L +C+ +     G+   +++  R ++EP +   + +I L  
Sbjct: 436 FELMLQKDIAPNTITFIAVLSACVHTGKVEEGQKYFNMMKERFRIEPEAEHYSCMIDLLG 495

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + G L EA +I ++M      + W++++ +    G    A+    E L+L
Sbjct: 496 RAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLQL 545


>gi|449480302|ref|XP_004155856.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Cucumis sativus]
          Length = 654

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 236/635 (37%), Positives = 378/635 (59%), Gaps = 6/635 (0%)

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLS 287
           GS+ +  AY VF      + + W  M+        PR A++ + +M+  S  +PDRFT  
Sbjct: 24  GSLGVGYAYSVFAHTRVLDVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFP 83

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            ++  C+ L  F  GK LH   ++  L  D+ +  +L++MYA C   G +  +R +F+RM
Sbjct: 84  SLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC---GDLKSARFLFERM 140

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              N + WT++I+GY+++   + EA+ L+  M +   +P+  T A+++ AC  L D  V 
Sbjct: 141 GHRNKVVWTSMISGYMKNHCPN-EALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVG 199

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            ++++H  +    +   +G++L++MYA+ G ++ AR+ F+ L +K++ +++ ++  Y KN
Sbjct: 200 MKLHSHIREMDMKICAVLGSALVNMYAKCGDLKTARQVFDQLSDKDVYAWSALIFGYVKN 259

Query: 468 LNSEKAFELLHEIED-TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             S +A +L  E+   + +  +  T  +++S  + +G +  G  +H  I ++    +  +
Sbjct: 260 NRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSL 319

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            N+LI M+S+C +++AA ++F  M  +++ISW SM+ G A HG    AL  F+ M    +
Sbjct: 320 NNSLIDMFSKCGDIDAAKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDL 379

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ IT+I VL+ACSHAGL+ EG K F  +   +G+  + EHY CMVDLL R+G L EA 
Sbjct: 380 QPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRLKSEHYGCMVDLLCRAGLLAEAR 439

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           EFIR MPL  D  +W + LGACRV+ + ELG+ AA  +LE +P +   +ILLSN+YA   
Sbjct: 440 EFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCLLELEPTNDGVYILLSNIYARRK 499

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W  V  +R+ M E+ + K  GCS +  DN  H F  G+ SHP+  EI   L Q+  K+K
Sbjct: 500 MWNEVKKVRELMNEKGIQKTPGCSSVVIDNIAHSFLAGDCSHPEIAEISIMLRQVREKLK 559

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             GY+ DT+ VL  +++ +K + + QHSEK+A+ +GL+ +     I + KNLRVC DCHT
Sbjct: 560 LVGYVADTSEVLLNIDDNKKEESVSQHSEKLALCYGLLKSEIGGRIVILKNLRVCSDCHT 619

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IK +S +  R+I LRD NRFHH KDG CSC DYW
Sbjct: 620 LIKLVSKIYQRQITLRDRNRFHHFKDGSCSCRDYW 654



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/459 (28%), Positives = 238/459 (51%), Gaps = 41/459 (8%)

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF-CPNEYCFSAVIRACSNTENVAIGHII 202
           D+++W+SM+ ++VN      A+  + EMLE     P+ + F ++++ C+      +G ++
Sbjct: 42  DVLTWNSMLRAFVNSNMPRRALQSYTEMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVL 101

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +G ++K     SD+ +   L++M+     DL+SA  +F++M  +N V WT MI+   +  
Sbjct: 102 HGQVVKY-MLHSDLYIETTLLNMYAACG-DLKSARFLFERMGHRNKVVWTSMISGYMKNH 159

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           CP +A+ L+  M   GF PD  T++ +VSAC+EL+    G +LHS      + +   +G 
Sbjct: 160 CPNEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGS 219

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +LV+MYAKC   G +  +R+VFD++ D +V +W+A+I GYV++  R  EA++LF ++  G
Sbjct: 220 ALVNMYAKC---GDLKTARQVFDQLSDKDVYAWSALIFGYVKN-NRSTEALQLFREVAGG 275

Query: 383 -QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             + PN  T  +V+ AC  L D      V+ +  +  +     + NSLI M+++ G ++ 
Sbjct: 276 SNMRPNEVTILAVISACAQLGDLETGRWVHDYITRTQKGHSVSLNNSLIDMFSKCGDIDA 335

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A++ F+S+  K+L+S+N+MV+  A +    +A    H ++ T +     TF  +L+  S 
Sbjct: 336 AKRIFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSH 395

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
            G + +G+++   I                         EA + V  + E      +  M
Sbjct: 396 AGLVQEGKKLFYEI-------------------------EALYGVRLKSE-----HYGCM 425

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           +    + G  A A E    M    ++P+G  + ++L AC
Sbjct: 426 VDLLCRAGLLAEAREFIRVM---PLQPDGAIWGSMLGAC 461



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 226/430 (52%), Gaps = 19/430 (4%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           +++ +  N PD  T+  LLK C     F +GK++H  + +  L  +  I  +L+++Y+ C
Sbjct: 68  EMLERSRNVPDRFTFPSLLKGCALLLEFKVGKVLHGQVVKYMLHSDLYIETTLLNMYAAC 127

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           GDL  A  +F+ MG++  +V W+SMIS Y+      +A+ ++ +M E GF P+E   + +
Sbjct: 128 GDLKSARFLFERMGHRNKVV-WTSMISGYMKNHCPNEALLLYKKMEEDGFSPDEVTMATL 186

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVKGSVDLESAYKVFDKMT 244
           + AC+  +++ +G  ++  + +    D  +C  +G AL++M+ K   DL++A +VFD+++
Sbjct: 187 VSACAELKDLGVGMKLHSHIRE---MDMKICAVLGSALVNMYAKCG-DLKTARQVFDQLS 242

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGK 303
           +K+   W+ +I    +     +A++LF ++   S   P+  T+  V+SAC++L    +G+
Sbjct: 243 DKDVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRPNEVTILAVISACAQLGDLETGR 302

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            +H +  RT     V +  SL+DM++KC   G +D ++++FD M   +++SW +++ G  
Sbjct: 303 WVHDYITRTQKGHSVSLNNSLIDMFSKC---GDIDAAKRIFDSMSYKDLISWNSMVNGLA 359

Query: 364 QSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL-LDSNVAEQVYTHAVKRGRAL 421
             G GR  EA+  F  M    + P+  TF  VL AC +  L     +  Y      G  L
Sbjct: 360 LHGLGR--EALAQFHLMQTTDLQPDEITFIGVLTACSHAGLVQEGKKLFYEIEALYGVRL 417

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN-SEKAFELL 477
                  ++ +  R+G + +AR+    +  + +   + +M+ A     NL   E+A   L
Sbjct: 418 KSEHYGCMVDLLCRAGLLAEAREFIRVMPLQPDGAIWGSMLGACRVYNNLELGEEAARCL 477

Query: 478 HEIEDTGVGT 487
            E+E T  G 
Sbjct: 478 LELEPTNDGV 487



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/247 (29%), Positives = 132/247 (53%), Gaps = 4/247 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            +A+     M + G  PD  T + L+ +C   ++  +G  +HS +    ++  +V+ ++L
Sbjct: 162 NEALLLYKKMEEDGFSPDEVTMATLVSACAELKDLGVGMKLHSHIREMDMKICAVLGSAL 221

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCP 178
           +++Y+KCGDL  A ++F  + +K D+ +WS++I  YV   +  +A+ +F E+       P
Sbjct: 222 VNMYAKCGDLKTARQVFDQLSDK-DVYAWSALIFGYVKNNRSTEALQLFREVAGGSNMRP 280

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           NE    AVI AC+   ++  G  ++ ++ +     S V +  +LIDMF K   D+++A +
Sbjct: 281 NEVTILAVISACAQLGDLETGRWVHDYITRTQKGHS-VSLNNSLIDMFSKCG-DIDAAKR 338

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FD M+ K+ + W  M+      G  R+A+  F  M  +   PD  T  GV++ACS   L
Sbjct: 339 IFDSMSYKDLISWNSMVNGLALHGLGREALAQFHLMQTTDLQPDEITFIGVLTACSHAGL 398

Query: 299 FTSGKQL 305
              GK+L
Sbjct: 399 VQEGKKL 405


>gi|359484341|ref|XP_002280538.2| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Vitis vinifera]
 gi|297738773|emb|CBI28018.3| unnamed protein product [Vitis vinifera]
          Length = 695

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 241/648 (37%), Positives = 376/648 (58%), Gaps = 41/648 (6%)

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV    A++  + K S ++E    VFD+M+  + V +  +I   +  GC   A+  F+ M
Sbjct: 88  DVFSWNAMLSAYSK-SGNVEDLRAVFDQMSVHDAVSYNTVIAGFSGNGCSSQALEFFVRM 146

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
              GF    +T   V+ ACS+L     GKQ+H   + T L   V V  +L +MYAKC   
Sbjct: 147 QEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKC--- 203

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G++D +R +FDRM++ NV+SW ++I+GY+Q+G + +   KLF +M    + P+  T +++
Sbjct: 204 GALDQARWLFDRMVNKNVVSWNSMISGYLQNG-QPETCTKLFCEMQSSGLMPDQVTISNI 262

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L A                                   Y + G +++A K F  + EK+ 
Sbjct: 263 LSA-----------------------------------YFQCGYIDEACKTFREIKEKDK 287

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           V + TM+   A+N   E A  L  E+    V    +T +S++S  + + ++ +G+ +H +
Sbjct: 288 VCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGK 347

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
            +  G + +  + +AL+ MYS+C     A+ VFK M  RNVISW SMI G+A++G    A
Sbjct: 348 AVIFGVDHDLLVSSALVDMYSKCGETADAWIVFKRMLTRNVISWNSMILGYAQNGKDLEA 407

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L ++ +ML + +KP+ IT++ VLSAC HAGL+  G  +F S+   HG+    +HY+CM++
Sbjct: 408 LALYEEMLHENLKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSCMIN 467

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LLGR+G + +A++ I+SM    + L+W T L  CR++ D   G+ AA  + E DP +   
Sbjct: 468 LLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFELDPHNAGP 527

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           +I+LSN+YA+ G W+ VA +R  MK   + K A  SWIE DN+VHKF   + +H +T +I
Sbjct: 528 YIMLSNIYAACGRWKDVAAVRSLMKNNKIKKFAAYSWIEIDNQVHKFVAEDRTHSETEQI 587

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK-PIR 813
           Y EL++L  K++E G+ PDTN VLH++ EE+K   +  HSEK+A+AF LI     + PIR
Sbjct: 588 YEELNRLIKKLQESGFTPDTNLVLHDVVEEEKFDSICYHSEKLALAFWLIKKPHGRTPIR 647

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + KN+RVCGDCH  +K++S +  R I+LRD NRFHH  +G+CSC D W
Sbjct: 648 IMKNIRVCGDCHVFMKFVSKIIRRPIILRDINRFHHFIEGRCSCKDSW 695



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 214/426 (50%), Gaps = 53/426 (12%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G      T+  +L +C +  +   GK +H  +  + L  +  + N+L ++Y+KCG 
Sbjct: 146 MQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGRIVATSLGESVFVWNALTNMYAKCGA 205

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L++A  +F  M NK ++VSW+SMIS Y+  G+      +F EM   G  P++   S ++ 
Sbjct: 206 LDQARWLFDRMVNK-NVVSWNSMISGYLQNGQPETCTKLFCEMQSSGLMPDQVTISNILS 264

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           A                  +CGY D                      A K F ++ EK+ 
Sbjct: 265 A----------------YFQCGYID---------------------EACKTFREIKEKDK 287

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V WT M+  C Q G   DA+ LF +M+L    PD FT+S VVS+C+ L     G+ +H  
Sbjct: 288 VCWTTMMVGCAQNGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGK 347

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           A+  G+  D+ V  +LVDMY+KC   G   D+  VF RML  NV+SW ++I GY Q+ G+
Sbjct: 348 AVIFGVDHDLLVSSALVDMYSKC---GETADAWIVFKRMLTRNVISWNSMILGYAQN-GK 403

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE--QVYTHAVKRGRALDDCVG 426
           D EA+ L+ +M+   + P++ TF  VL AC   + + + E  Q Y +++ +   ++    
Sbjct: 404 DLEALALYEEMLHENLKPDNITFVGVLSAC---MHAGLVERGQGYFYSISKIHGMNPTFD 460

Query: 427 N--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNL---NSEKAFELLHEI 480
           +   +I++  R+G M+ A    +S+ FE N + ++T++     N    N E A   L E+
Sbjct: 461 HYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLSVCRINCDVNNGEMAARHLFEL 520

Query: 481 EDTGVG 486
           +    G
Sbjct: 521 DPHNAG 526



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 143/540 (26%), Positives = 254/540 (47%), Gaps = 80/540 (14%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL- 116
           R+++AI   D +  +G   + ++Y+ LL  C+RS +    K + + +     +P    L 
Sbjct: 6   RLREAI---DALYSRGT-ANSESYTRLLLQCVRSNDVVQAKRLQTHMDLHLYQPTDTFLQ 61

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD------------- 163
           N L+ LY+K G+L++A  +F  M ++RD+ SW++M+S+Y   G   D             
Sbjct: 62  NRLLHLYAKSGNLSDARDLFDKM-SRRDVFSWNAMLSAYSKSGNVEDLRAVFDQMSVHDA 120

Query: 164 ------------------AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
                             A+  FV M E GF   +Y   +V+ ACS   ++  G  I+G 
Sbjct: 121 VSYNTVIAGFSGNGCSSQALEFFVRMQEEGFESTDYTHVSVLHACSQLLDIKRGKQIHGR 180

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
           ++     +S V V  AL +M+ K    L+ A  +FD+M  KN V W  MI+   Q G P 
Sbjct: 181 IVATSLGES-VFVWNALTNMYAKCGA-LDQARWLFDRMVNKNVVSWNSMISGYLQNGQPE 238

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
              +LF +M  SG +PD+ T+S ++SA                                 
Sbjct: 239 TCTKLFCEMQSSGLMPDQVTISNILSA--------------------------------- 265

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
             Y +C   G +D++ K F  + + + + WT ++ G  Q+ G++++A+ LF +M+   V 
Sbjct: 266 --YFQC---GYIDEACKTFREIKEKDKVCWTTMMVGCAQN-GKEEDALLLFREMLLENVR 319

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P++FT +SV+ +C  L      + V+  AV  G   D  V ++L+ MY++ G   DA   
Sbjct: 320 PDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLVSSALVDMYSKCGETADAWIV 379

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F+ +  +N++S+N+M+  YA+N    +A  L  E+    +     TF  +LS     G +
Sbjct: 380 FKRMLTRNVISWNSMILGYAQNGKDLEALALYEEMLHENLKPDNITFVGVLSACMHAGLV 439

Query: 506 GKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
            +G+     I K  G       Y+ +I++  R   ++ A  + K M  + N + W+++++
Sbjct: 440 ERGQGYFYSISKIHGMNPTFDHYSCMINLLGRAGYMDKAVDLIKSMTFEPNCLIWSTLLS 499



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 11/208 (5%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+ + A+     M  +   PD  T S ++ SC R  +   G+ VH       ++ + ++
Sbjct: 300 NGKEEDALLLFREMLLENVRPDNFTISSVVSSCARLASLCQGQAVHGKAVIFGVDHDLLV 359

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++L+ +YSKCG+  +A  +FK M   R+++SW+SMI  Y   GK ++A+ ++ EML   
Sbjct: 360 SSALVDMYSKCGETADAWIVFKRMLT-RNVISWNSMILGYAQNGKDLEALALYEEMLHEN 418

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC----GYFDSDVCVGCALIDMFVKGSV 231
             P+   F  V+ AC +   V  G   +  + K       FD   C    +I++  +   
Sbjct: 419 LKPDNITFVGVLSACMHAGLVERGQGYFYSISKIHGMNPTFDHYSC----MINLLGRAGY 474

Query: 232 DLESAYKVFDKMT-EKNTVGWTLMITRC 258
            ++ A  +   MT E N + W+ +++ C
Sbjct: 475 -MDKAVDLIKSMTFEPNCLIWSTLLSVC 501


>gi|357440933|ref|XP_003590744.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479792|gb|AES60995.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 795

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 267/781 (34%), Positives = 410/781 (52%), Gaps = 86/781 (11%)

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
           Q+ A  +   +L  GF PN +  + +I     + N+     ++  + K      D+    
Sbjct: 21  QIIARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPK-----PDIVART 75

Query: 221 ALIDMFVKGSVDLESAYKVFD--KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
            L+  +   S +++ A ++F+   +T ++TV +  MIT  +       A+ LF+ M   G
Sbjct: 76  TLLSAY-SSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYG 134

Query: 279 FLPDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           FLPD FT S V+SA S + +     + LH   I+ G  L   V  +L+  Y  C     V
Sbjct: 135 FLPDPFTFSSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLV 194

Query: 338 DDS------RKVFDRMLDHNVM--SWTAIITGYVQSG----------------------- 366
             S      RKVFD    + +   SWT +I GYV++                        
Sbjct: 195 KSSQLMASARKVFDETPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAM 254

Query: 367 -------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS----NVAEQVYTH-- 413
                  G  +EA   F  M    +  + +T+ S++ ACG+  +     N   QV+ +  
Sbjct: 255 ISGYVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYIL 314

Query: 414 --AVKRGRALDDCVGNSLISMYARSGRMEDARKAFE------------------------ 447
              V+        V N+LI+ Y +  RM +AR+ F+                        
Sbjct: 315 RTVVEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIE 374

Query: 448 ---SLF----EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
              S+F    E+N++++  M+   A+N   E+  +L ++++  G+    Y FA  ++  S
Sbjct: 375 EANSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACS 434

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            +G++  G+QIH+++I+ G +S     NALI+MYSRC  VE+A  VF  M   + +SW +
Sbjct: 435 VLGSLDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNA 494

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI   A+HG   +A+E+F +M+ + I P+ IT++ +L+AC+HAGLI EG  +F +M   +
Sbjct: 495 MIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRY 554

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI    +HYA ++DLL R+G   +A   I+SMP  A   +W   L  CR+HG+ ELG  A
Sbjct: 555 GITPGEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHGNMELGIQA 614

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +LE  P     +I+LSN+YA+ G W+ VA +R  M+ER + KE GCSW+E +N VH 
Sbjct: 615 ADRLLELIPGQDGTYIILSNMYAALGQWDEVARVRLLMRERGVKKEPGCSWVEVENMVHV 674

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F V +  HP+   +Y  L QL  ++K+ GY+PDT FVLH++E E K   L  HSEK+AV 
Sbjct: 675 FLVDDARHPEVQAVYTYLQQLVNEMKKLGYVPDTKFVLHDMESEHKEHSLSTHSEKLAVV 734

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           +G++       IRVFKNLR+CGDCH A KYIS V  REIV+RD  RFHH K+G+CSC +Y
Sbjct: 735 YGIMKLPLGATIRVFKNLRICGDCHNAFKYISKVVEREIVVRDRKRFHHFKNGECSCGNY 794

Query: 861 W 861
           W
Sbjct: 795 W 795



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 145/588 (24%), Positives = 246/588 (41%), Gaps = 118/588 (20%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF------------------K 137
           + + VH+ +  S  +PN+ ILN LI++Y K  ++  A K+F                   
Sbjct: 23  IARAVHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFDKIPKPDIVARTTLLSAYS 82

Query: 138 SMGNK--------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
           S GN               RD VS+++MI++Y +      A+++FV+M   GF P+ + F
Sbjct: 83  SSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAALNLFVQMKRYGFLPDPFTF 142

Query: 184 SAVIRACS----NTENVAIGH---IIYGFLLKCGYFDSDV-CVGCALIDMFVKGSVDLES 235
           S+V+ A S       +  + H   I  G LL     ++ + C  C      VK S  + S
Sbjct: 143 SSVLSALSLIADEERHCQMLHCEVIKLGTLLIPSVTNALLSCYVCCASSPLVKSSQLMAS 202

Query: 236 AYKVFDKMTEKNT----------------------------------VGWTLMITRCTQL 261
           A KVFD+ T KN                                   V W  MI+   + 
Sbjct: 203 ARKVFDE-TPKNQIYEPSWTTMIAGYVRNDDLVAARELLDGLTYPIDVAWNAMISGYVRR 261

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC----SELELFTSGKQLHSWAIRTGLA-- 315
           G   +A   F  M   G   D +T + ++SAC     ++ +F  G+Q+H + +RT +   
Sbjct: 262 GLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTVVEPS 321

Query: 316 --LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS-------- 365
               + V  +L+  Y K      + ++R+VFD+M   +++SW A+++GYV +        
Sbjct: 322 HHFVLSVNNALITFYTKYD---RMIEARRVFDKMPVRDIISWNAVLSGYVNAQRIEEANS 378

Query: 366 ----------------------GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
                                  G  +E +KLF+ M    + P  + FA  + AC  L  
Sbjct: 379 IFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVLGS 438

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
            +  +Q+++  ++ G       GN+LI+MY+R G +E A   F ++   + VS+N M+ A
Sbjct: 439 LDNGQQIHSQVIRLGHDSGLSAGNALITMYSRCGVVESAESVFLTMPYVDSVSWNAMIAA 498

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFES 522
            A++ +  KA EL  ++    +     TF ++L+  +  G I +G         + G   
Sbjct: 499 LAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRHYFDTMCTRYGITP 558

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
               Y  LI +  R      A  V K M  +     W +++ G   HG
Sbjct: 559 GEDHYARLIDLLCRAGMFLKAQSVIKSMPFEAGAPIWEALLAGCRIHG 606



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 85/291 (29%), Positives = 134/291 (46%), Gaps = 42/291 (14%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN----FHLGKLVHSLLTRSK 108
           ++  G  ++A  T   M   G   D  TY+ L+ +C         F+ G+ VH  + R+ 
Sbjct: 258 YVRRGLYEEAFDTFRRMHSMGIQEDEYTYTSLISACGSCNEKMGMFNCGRQVHGYILRTV 317

Query: 109 LEPNSVIL----NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
           +EP+   +    N+LI+ Y+K   + EA ++F  M   RDI+SW++++S YVN  +  +A
Sbjct: 318 VEPSHHFVLSVNNALITFYTKYDRMIEARRVFDKMP-VRDIISWNAVLSGYVNAQRIEEA 376

Query: 165 IHMFVEMLEL-------------------------------GFCPNEYCFSAVIRACSNT 193
             +F EM E                                G  P +Y F+  I ACS  
Sbjct: 377 NSIFSEMPERNVLTWTVMISGLAQNGFGEEGLKLFNQMKSEGLEPCDYAFAGAITACSVL 436

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            ++  G  I+  +++ G+ DS +  G ALI M+ +  V +ESA  VF  M   ++V W  
Sbjct: 437 GSLDNGQQIHSQVIRLGH-DSGLSAGNALITMYSRCGV-VESAESVFLTMPYVDSVSWNA 494

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           MI    Q G    AI LF  M+    LPDR T   +++AC+   L   G+ 
Sbjct: 495 MIAALAQHGHGVKAIELFEQMMKEDILPDRITFLTILTACNHAGLIKEGRH 545



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 41/164 (25%), Positives = 75/164 (45%), Gaps = 38/164 (23%)

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
           AY + + L+  S+   I +   +HA I+ SGF+ N  I N LI++Y + +N+  A ++F 
Sbjct: 7   AYRYLTQLNHVSTTQIIARA--VHAHILTSGFKPNTFILNRLINIYCKSSNITYARKLFD 64

Query: 549 EMED---------------------------------RNVISWTSMITGFAKHGFAARAL 575
           ++                                   R+ +S+ +MIT ++       AL
Sbjct: 65  KIPKPDIVARTTLLSAYSSSGNVKLAQQLFNATPLTIRDTVSYNAMITAYSHGNDGHAAL 124

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
            +F +M   G  P+  T+ +VLSA S   LI++  +H + ++ E
Sbjct: 125 NLFVQMKRYGFLPDPFTFSSVLSALS---LIADEERHCQMLHCE 165


>gi|357166812|ref|XP_003580863.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Brachypodium distachyon]
          Length = 707

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 256/705 (36%), Positives = 403/705 (57%), Gaps = 36/705 (5%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           ++RA + +  +  G  ++G LLK G F SD  +G  LIDM+ K   +L  A +VF  M E
Sbjct: 10  MLRASAASSAIHGGAQLHGALLKLG-FGSDTMLGNNLIDMYAKCG-ELRMAGEVFGGMPE 67

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +N V WT ++    + G  R+ +RL   M  LS   P+ FTLS  + AC  +    +G  
Sbjct: 68  RNVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVW 127

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   +R G      V  SLV +Y+K    G + D+R+VFD  +  N+++W A+I+GY  
Sbjct: 128 IHGACVRAGFEGHHVVANSLVLLYSK---GGRIGDARRVFDGTVFRNLVTWNAMISGYAH 184

Query: 365 SG-GRDKEAVKLFSDMIQGQV-----APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           +G GRD  ++ +F +M Q +       P+ FTFAS+LKACG+L  +    QV+   V RG
Sbjct: 185 AGHGRD--SLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRG 242

Query: 419 --RALDDCVGNSLISMYARSG-RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
              A +  +  +L+ MY +    +  A + F  L +KN + + T++  +A+    ++A E
Sbjct: 243 VSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQVKEAME 302

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L      +GV    +  +S++   +    + +G Q+H   +K+    +  + N+LI MY 
Sbjct: 303 LFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYH 362

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C   + A + F+E+  RNV+SWT+MI G  KHG    A+ +F +M A+G++P+ + Y+A
Sbjct: 363 KCGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLA 422

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LSACSH+GL+ E  ++F ++  +  +  R EHYACMVDLLGR+G L+EA + + +MP++
Sbjct: 423 LLSACSHSGLVEECRRYFSAIRHDRRLRPRAEHYACMVDLLGRAGELSEAKDLVATMPMA 482

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
             V VW+T L ACRVH +  +G+ A E +L  D  +P  +++LSN++A AG W     +R
Sbjct: 483 PTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNPVNYVMLSNIFAEAGDWRECQRVR 542

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFH-VGETSHPKTLEIYAELDQLALKIKE-FGYLPD 773
             M+ R L K+ GCSW+E   + H F+  G+ SHP+  +I   L  +   ++E  GY P 
Sbjct: 543 GAMRRRGLRKQGGCSWVEVGKEAHFFYGGGDDSHPRAADICCVLRDVERTMRERLGYSPG 602

Query: 774 -----TNFVLHELEEEQKVQYLFQHSEKIAVAF------------GLISTSKSKPIRVFK 816
                +   LH+++EE + + L  HSE++AV              G+  T + + IRV+K
Sbjct: 603 SSSSSSEAALHDVDEESRAESLRAHSERLAVGLWLLLHHDHDHGEGMGGTKRKEVIRVYK 662

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVCGDCH   K +S V GR +V+RD+NRFH  +DG CSC DYW
Sbjct: 663 NLRVCGDCHEFFKGLSSVVGRVLVVRDANRFHRFEDGVCSCKDYW 707



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/536 (25%), Positives = 254/536 (47%), Gaps = 27/536 (5%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L++   S   H G  +H  L +     ++++ N+LI +Y+KCG+L  A ++F  M  +R
Sbjct: 10  MLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKCGELRMAGEVFGGM-PER 68

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHII 202
           ++VSW++++  ++  G   + + +   M  L    PNE+  SA ++AC    ++A G  I
Sbjct: 69  NVVSWTALMVGFLRHGDARECLRLLGAMRSLSDVAPNEFTLSASLKACGVVGDMAAGVWI 128

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +G  ++ G F+    V  +L+ ++ KG   +  A +VFD    +N V W  MI+     G
Sbjct: 129 HGACVRAG-FEGHHVVANSLVLLYSKGG-RIGDARRVFDGTVFRNLVTWNAMISGYAHAG 186

Query: 263 CPRDAIRLFLDMIL-----SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL--A 315
             RD++ +F +M           PD FT + ++ AC  L     G Q+H+  +  G+  A
Sbjct: 187 HGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHAAMVIRGVSTA 246

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            +  +  +L+DMY KC     +  + +VF+R+   N + WT +I G+ Q  G+ KEA++L
Sbjct: 247 SNAILAGALLDMYVKCRC--LLPMAMQVFNRLEQKNAIQWTTVIVGHAQE-GQVKEAMEL 303

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F       V  +    +SV+    +        QV+ + VK    LD  V NSLI MY +
Sbjct: 304 FGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVANSLIDMYHK 363

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G  ++A + F  +  +N+VS+  M++   K+ + ++A  +  E+   GV      + +L
Sbjct: 364 CGLTDEAARRFREVPARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGVEPDEVAYLAL 423

Query: 496 LSGASSIGAIGKGEQI-----HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           LS  S  G + +  +      H R ++   E     Y  ++ +  R   +  A  +   M
Sbjct: 424 LSACSHSGLVEECRRYFSAIRHDRRLRPRAEH----YACMVDLLGRAGELSEAKDLVATM 479

Query: 551 EDRNVIS-WTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAG 604
                +  W ++++    H       E    +LA DG  P  + Y+ + +  + AG
Sbjct: 480 PMAPTVGVWQTLLSACRVHKNVTVGREAGETLLAIDGDNP--VNYVMLSNIFAEAG 533



 Score =  189 bits (481), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 133/459 (28%), Positives = 231/459 (50%), Gaps = 24/459 (5%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +  R  ++ ++ A +       G QLH   ++ G   D  +G +L+DMYAKC   G +  
Sbjct: 1   MERRKMIADMLRASAASSAIHGGAQLHGALLKLGFGSDTMLGNNLIDMYAKC---GELRM 57

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKAC 398
           + +VF  M + NV+SWTA++ G+++ G   +E ++L   M     VAPN FT ++ LKAC
Sbjct: 58  AGEVFGGMPERNVVSWTALMVGFLRHGD-ARECLRLLGAMRSLSDVAPNEFTLSASLKAC 116

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
           G + D      ++   V+ G      V NSL+ +Y++ GR+ DAR+ F+    +NLV++N
Sbjct: 117 GVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRVFDGTVFRNLVTWN 176

Query: 459 TMVDAYAKNLNSEKAFELLHEI-----EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
            M+  YA   +   +  +  E+     E+       +TFASLL    S+GA  +G Q+HA
Sbjct: 177 AMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKACGSLGAAREGAQVHA 236

Query: 514 RIIKSGFE--SNHCIYNALISMYSRC-ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
            ++  G    SN  +  AL+ MY +C   +  A QVF  +E +N I WT++I G A+ G 
Sbjct: 237 AMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAIQWTTVIVGHAQEGQ 296

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHY 629
              A+E+F +  + G++ +G    +V+   +   L+ +G + H  ++    G+   + + 
Sbjct: 297 VKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPAGLDVSVAN- 355

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA-AEMILEQD 688
             ++D+  + G   EA    R +P + +V+ W   +     HG  +   H   EM  E  
Sbjct: 356 -SLIDMYHKCGLTDEAARRFREVP-ARNVVSWTAMINGLGKHGHGQEAIHMFEEMRAEGV 413

Query: 689 PQDPAAHILLSNLYASAGHWE----YVANIR--KRMKER 721
             D  A++ L +  + +G  E    Y + IR  +R++ R
Sbjct: 414 EPDEVAYLALLSACSHSGLVEECRRYFSAIRHDRRLRPR 452



 Score =  175 bits (444), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/378 (30%), Positives = 198/378 (52%), Gaps = 18/378 (4%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T S  LK+C    +   G  +H    R+  E + V+ NSL+ LYSK G + +A ++
Sbjct: 104 PNEFTLSASLKACGVVGDMAAGVWIHGACVRAGFEGHHVVANSLVLLYSKGGRIGDARRV 163

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-----ELGFCPNEYCFSAVIRAC 190
           F      R++V+W++MIS Y + G   D++ +F EM      E    P+E+ F+++++AC
Sbjct: 164 FDGT-VFRNLVTWNAMISGYAHAGHGRDSLLVFREMQQRRQEEEDHQPDEFTFASLLKAC 222

Query: 191 SNTENVAIGHIIYGFLLKCGYFD-SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
            +      G  ++  ++  G    S+  +  AL+DM+VK    L  A +VF+++ +KN +
Sbjct: 223 GSLGAAREGAQVHAAMVIRGVSTASNAILAGALLDMYVKCRCLLPMAMQVFNRLEQKNAI 282

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            WT +I    Q G  ++A+ LF     SG   D   LS VV   ++  L   G+Q+H + 
Sbjct: 283 QWTTVIVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYT 342

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           ++T   LDV V  SL+DMY KC   G  D++ + F  +   NV+SWTA+I G  +  G  
Sbjct: 343 VKTPAGLDVSVANSLIDMYHKC---GLTDEAARRFREVPARNVVSWTAMINGLGKH-GHG 398

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV--YTHAVKRGRALDDCVGN 427
           +EA+ +F +M    V P+   + ++L AC +   S + E+   Y  A++  R L     +
Sbjct: 399 QEAIHMFEEMRAEGVEPDEVAYLALLSACSH---SGLVEECRRYFSAIRHDRRLRPRAEH 455

Query: 428 --SLISMYARSGRMEDAR 443
              ++ +  R+G + +A+
Sbjct: 456 YACMVDLLGRAGELSEAK 473



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 42/144 (29%), Positives = 73/144 (50%), Gaps = 1/144 (0%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ H  +G+V++A+         G   D    S ++           G+ VH    ++  
Sbjct: 288 IVGHAQEGQVKEAMELFGRFWSSGVRADGHVLSSVVGVFADFALVEQGRQVHCYTVKTPA 347

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +  + NSLI +Y KCG  +EA + F+ +   R++VSW++MI+     G   +AIHMF 
Sbjct: 348 GLDVSVANSLIDMYHKCGLTDEAARRFREV-PARNVVSWTAMINGLGKHGHGQEAIHMFE 406

Query: 170 EMLELGFCPNEYCFSAVIRACSNT 193
           EM   G  P+E  + A++ ACS++
Sbjct: 407 EMRAEGVEPDEVAYLALLSACSHS 430


>gi|356498879|ref|XP_003518275.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g27610-like [Glycine max]
          Length = 754

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 246/690 (35%), Positives = 403/690 (58%), Gaps = 18/690 (2%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           +  +++ C +  + +   I++G ++K G  D +  V   L++++ K   ++E A +VF+ 
Sbjct: 67  YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHD-NFFVMSFLVNVYAKCG-NMEDARRVFEN 124

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M  +N V WT ++    Q   P+ AI +F +M+ +G  P  +TLS V+ ACS L+    G
Sbjct: 125 MPRRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLG 184

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
            Q H++ I+  L  D  VG +L  +Y+KC   G ++D+ K F R+ + NV+SWT+ ++  
Sbjct: 185 DQFHAYIIKYHLDFDTSVGSALCSLYSKC---GRLEDALKAFSRIREKNVISWTSAVSAC 241

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
             +G   K  ++LF +MI   + PN FT  S L  C  +    +  QV +  +K G   +
Sbjct: 242 GDNGAPVK-GLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESN 300

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK-------NLNS----E 471
             V NSL+ +Y +SG + +A + F  + + ++V++N M+  +A+       NL++     
Sbjct: 301 LRVRNSLLYLYLKSGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGS 360

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A ++  ++  +G+    +T +S+LS  S + AI +GEQIHA+ IK+GF S+  +  +LI
Sbjct: 361 EALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 420

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           SMY++C ++E A + F EM  R +I+WTSMITGF++HG + +AL IF  M   G++PN +
Sbjct: 421 SMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTV 480

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++ VLSACSHAG++S+   +F  M  ++ I   M+HY CMVD+  R G L +AL FI+ 
Sbjct: 481 TFVGVLSACSHAGMVSQALNYFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIKK 540

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M       +W  F+  CR HG+ ELG +A+E +L   P+DP  ++LL N+Y SA  ++ V
Sbjct: 541 MNYEPSEFIWSNFIAGCRSHGNLELGFYASEQLLSLKPKDPETYVLLLNMYLSADRFDDV 600

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY- 770
           + +RK M+   + K    SWI   +KV+ F   + +HP +  I   L+ L  K K  GY 
Sbjct: 601 SRVRKMMEVEKVGKLKDWSWISIKDKVYSFKTNDKTHPPSSLICKSLEDLLAKAKNLGYE 660

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           + ++  +  E EEE+       HSEK+A+ FGL +   S PIRV K+  +C D H  IK 
Sbjct: 661 MLESVEISDEEEEEKTSSPTIYHSEKLAITFGLENLPNSSPIRVVKSTLICRDSHNFIKC 720

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           +S +TGREI+++DS R H   +G+CSC ++
Sbjct: 721 VSTLTGREIIVKDSKRLHKFVNGECSCGNF 750



 Score =  266 bits (680), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 161/562 (28%), Positives = 296/562 (52%), Gaps = 30/562 (5%)

Query: 22  NPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDT- 80
           +P      PSS PP   Q  + +  S+R   HL+ G          L+ ++G   +    
Sbjct: 16  HPQFPKYSPSSYPPEKGQSISFQK-SHRFT-HLDFGEAL-------LLNKEGTEEEEKLF 66

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y  LL+ C+  R++   ++VH  + ++    N  +++ L+++Y+KCG++ +A ++F++M 
Sbjct: 67  YVPLLQQCLDKRSYSGTQIVHGHVMKTGCHDNFFVMSFLVNVYAKCGNMEDARRVFENMP 126

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            +R++V+W++++  +V   +   AIH+F EML  G  P+ Y  SAV+ ACS+ +++ +G 
Sbjct: 127 -RRNVVAWTTLMVGFVQNSQPKHAIHVFQEMLYAGSYPSIYTLSAVLHACSSLQSLKLGD 185

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
             + +++K  + D D  VG AL  ++ K    LE A K F ++ EKN + WT  ++ C  
Sbjct: 186 QFHAYIIKY-HLDFDTSVGSALCSLYSKCG-RLEDALKAFSRIREKNVISWTSAVSACGD 243

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G P   +RLF++MI     P+ FTL+  +S C E+     G Q+ S  I+ G   ++ V
Sbjct: 244 NGAPVKGLRLFVEMISEDIKPNEFTLTSALSQCCEIPSLELGTQVCSLCIKFGYESNLRV 303

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ----------SGGRDK 370
             SL+ +Y K    G + ++ + F+RM D ++++W A+I G+ Q          +  R  
Sbjct: 304 RNSLLYLYLK---SGFIVEAHRFFNRMDDVSMVTWNAMIAGHAQMMELTKDNLSACQRGS 360

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+K+FS + Q  + P+ FT +SVL  C  +L     EQ++   +K G   D  V  SLI
Sbjct: 361 EALKIFSKLNQSGMKPDLFTLSSVLSVCSRMLAIEQGEQIHAQTIKTGFLSDVIVSTSLI 420

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           SMY + G +E A KAF  +  + ++++ +M+  ++++  S++A  +  ++   GV  +  
Sbjct: 421 SMYNKCGSIERASKAFLEMSTRTMIAWTSMITGFSQHGMSQQALHIFEDMSLAGVRPNTV 480

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFK 548
           TF  +LS  S  G + +    +  I++  ++    +  Y  ++ M+ R   +E A    K
Sbjct: 481 TFVGVLSACSHAGMVSQALN-YFEIMQKKYKIKPVMDHYECMVDMFVRLGRLEQALNFIK 539

Query: 549 EME-DRNVISWTSMITGFAKHG 569
           +M  + +   W++ I G   HG
Sbjct: 540 KMNYEPSEFIWSNFIAGCRSHG 561


>gi|359487704|ref|XP_002276220.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g22070-like [Vitis vinifera]
          Length = 585

 Score =  461 bits (1186), Expect = e-127,   Method: Compositional matrix adjust.
 Identities = 238/589 (40%), Positives = 363/589 (61%), Gaps = 5/589 (0%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M  SG  P++FT S ++SA +   +   G+QLHS   + G   ++ VG +LVDMYAKC  
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKC-- 58

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFA 392
              +  + +VFD+M + N++SW ++I G+  +   D+ AV +F D+++ + V PN  + +
Sbjct: 59  -ADMHSAVRVFDQMPERNLVSWNSMIVGFFHNNLYDR-AVGVFKDVLREKTVIPNEVSVS 116

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           SVL AC N+   N   QV+   VK G      V NSL+ MY +    ++  K F+ + ++
Sbjct: 117 SVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKCRFFDEGVKLFQCVGDR 176

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           ++V++N +V  + +N   E+A      +   G+     +F+++L  ++S+ A+ +G  IH
Sbjct: 177 DVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIH 236

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
            +IIK G+  N CI  +LI+MY++C ++  A+QVF+ +ED NVISWT+MI+ +  HG A 
Sbjct: 237 DQIIKLGYVKNMCILGSLITMYAKCGSLVDAYQVFEGIEDHNVISWTAMISAYQLHGCAN 296

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           + +E+F  ML++GI+P+ +T++ VLSACSH G + EG  HF SM   H +    EHYACM
Sbjct: 297 QVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHFNSMKKIHDMNPGPEHYACM 356

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           VDLLGR+G L EA  FI SMP+     VW   LGACR +G+ ++G+ AAE + E +P +P
Sbjct: 357 VDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFEMEPYNP 416

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
             ++LL+N+   +G  E    +R+ M    + KE GCSWI+  N    F   + SH  + 
Sbjct: 417 GNYVLLANMCTRSGRLEEANEVRRLMGVNGVRKEPGCSWIDVKNMTFVFTAHDRSHSSSD 476

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           EIY  L++L   +K+ GY+ +T FV + LEE ++ Q L+ HSEK+A+AFGL++     PI
Sbjct: 477 EIYKMLEKLEKLVKKKGYVAETEFVTNHLEENEEEQGLWYHSEKLALAFGLLTLPIDSPI 536

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R+ KNLR CG CHT +K  S +  REI++RD NRFH   DG CSC DYW
Sbjct: 537 RIKKNLRTCGHCHTVMKLASKIFDREIIVRDINRFHRFADGFCSCGDYW 585



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 121/428 (28%), Positives = 216/428 (50%), Gaps = 19/428 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G +P+  T+S +L +   +     G+ +HSL+ +   + N  +  +L+ +Y+KC D
Sbjct: 1   MRCSGPYPNQFTFSSILSASAATMMVLHGQQLHSLIHKHGFDANIFVGTALVDMYAKCAD 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVI 187
           ++ A ++F  M  +R++VSW+SMI  + +      A+ +F ++L E    PNE   S+V+
Sbjct: 61  MHSAVRVFDQM-PERNLVSWNSMIVGFFHNNLYDRAVGVFKDVLREKTVIPNEVSVSSVL 119

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            AC+N   +  G  ++G ++K G       +  +L+DM+ K     +   K+F  + +++
Sbjct: 120 SACANMGGLNFGRQVHGVVVKFGLVPLTYVMN-SLMDMYFKCRF-FDEGVKLFQCVGDRD 177

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W +++    Q     +A   F  M   G LPD  + S V+ + + L     G  +H 
Sbjct: 178 VVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTVLHSSASLAALHQGTAIHD 237

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             I+ G   ++C+  SL+ MYAKC   GS+ D+ +VF+ + DHNV+SWTA+I+ Y Q  G
Sbjct: 238 QIIKLGYVKNMCILGSLITMYAKC---GSLVDAYQVFEGIEDHNVISWTAMISAY-QLHG 293

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
              + ++LF  M+   + P+H TF  VL AC +   +   E+   H     +  D   G 
Sbjct: 294 CANQVIELFEHMLSEGIEPSHVTFVCVLSACSH---TGRVEEGLAHFNSMKKIHDMNPGP 350

Query: 428 S----LISMYARSGRMEDARKAFESLFEKNLVS-YNTMVDAYAKNLN---SEKAFELLHE 479
                ++ +  R+G +++A++  ES+  K   S +  ++ A  K  N     +A E L E
Sbjct: 351 EHYACMVDLLGRAGWLDEAKRFIESMPMKPTPSVWGALLGACRKYGNLKMGREAAERLFE 410

Query: 480 IEDTGVGT 487
           +E    G 
Sbjct: 411 MEPYNPGN 418



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/351 (27%), Positives = 172/351 (49%), Gaps = 27/351 (7%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           D++ +K   P+  + S +L +C      + G+ VH ++ +  L P + ++NSL+ +Y KC
Sbjct: 101 DVLREKTVIPNEVSVSSVLSACANMGGLNFGRQVHGVVVKFGLVPLTYVMNSLMDMYFKC 160

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
              +E  K+F+ +G+ RD+V+W+ ++  +V   K  +A + F  M   G  P+E  FS V
Sbjct: 161 RFFDEGVKLFQCVGD-RDVVTWNVLVMGFVQNDKFEEACNYFWVMRREGILPDEASFSTV 219

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           + + ++   +  G  I+  ++K GY   ++C+  +LI M+ K    L  AY+VF+ + + 
Sbjct: 220 LHSSASLAALHQGTAIHDQIIKLGYV-KNMCILGSLITMYAKCG-SLVDAYQVFEGIEDH 277

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE-------LELF 299
           N + WT MI+     GC    I LF  M+  G  P   T   V+SACS        L  F
Sbjct: 278 NVISWTAMISAYQLHGCANQVIELFEHMLSEGIEPSHVTFVCVLSACSHTGRVEEGLAHF 337

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAI 358
            S K++H   +  G     C    +VD+  +    G +D++++  + M +      W A+
Sbjct: 338 NSMKKIHD--MNPGPEHYAC----MVDLLGRA---GWLDEAKRFIESMPMKPTPSVWGAL 388

Query: 359 ITGYVQSG----GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           +    + G    GR+  A +LF   ++     N+   A++    G L ++N
Sbjct: 389 LGACRKYGNLKMGREA-AERLFE--MEPYNPGNYVLLANMCTRSGRLEEAN 436


>gi|125547017|gb|EAY92839.1| hypothetical protein OsI_14639 [Oryza sativa Indica Group]
          Length = 702

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 259/707 (36%), Positives = 404/707 (57%), Gaps = 21/707 (2%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVA----IGHIIYGFLLKCGYFDSDVCVGC-ALIDM 225
           ML  G     +   +V+RA S+    A    +G   + F LK G           AL+ M
Sbjct: 1   MLAGGHPLTSFTLVSVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60

Query: 226 FVKGSVDLESAYKVFDKMT--EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           + +  + +  A ++F   T    + V W  M++   Q G   +A++   DM+  G  PD 
Sbjct: 61  YARLGL-VADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDG 119

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            T +  + ACS LEL   G+++H++ I+   LA +  V  +LVDMYA       V  +R+
Sbjct: 120 VTFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYA---THEQVGKARQ 176

Query: 343 VFDRMLD--HNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACG 399
           VFD + D    +  W A+I GY Q+G  D+EA++LF+ M  +    P   T ASVL AC 
Sbjct: 177 VFDMVPDSGKQLGMWNAMICGYAQAG-MDEEALRLFARMEAEAGFVPCETTMASVLPACA 235

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
                   E V+ + VKRG A +  V N+L+ MYAR G+ + AR+ F  +   ++VS+NT
Sbjct: 236 RSEAFAGKEAVHGYVVKRGMAGNRFVQNALMDMYARLGKTDVARRIFAMVDLPDVVSWNT 295

Query: 460 MVDAYAKNLNSEKAFEL---LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           ++       +   AF+L   + ++E+ GV  +A T  +LL G + + A  +G++IH   +
Sbjct: 296 LITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAV 355

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           +   +++  + +AL+ MY++C  +  +  VF  +  RN I+W  +I  +  HG    A  
Sbjct: 356 RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATV 415

Query: 577 IFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           +F +M A G  +PN +T++A L+ACSH+G++  G + F +M  +HG+    +  AC+VD+
Sbjct: 416 LFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDI 475

Query: 636 LGRSGSLTEALEFIRSMPLS-ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LGR+G L EA   + SM      V  W T LGACR+H +  LG+ A E +LE +P++ + 
Sbjct: 476 LGRAGRLDEAYAMVTSMEAGEQQVSAWSTMLGACRLHRNVHLGEIAGERLLELEPEEASH 535

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           ++LL N+Y++AG W   A +R RM+ R + KE GCSWIE D  +H+F  GE++HP + E+
Sbjct: 536 YVLLCNIYSAAGQWTRAAEVRSRMRRRGVAKEPGCSWIEVDGAIHRFMAGESAHPASEEV 595

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRV 814
           +A ++ L  ++   GY PDT+ VLH++++  K   L  HSEK+A+AFGL+  +    IRV
Sbjct: 596 HAHMEALWGEMVARGYTPDTSCVLHDMDDGDKAAVLRCHSEKLAIAFGLLRAAPGATIRV 655

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            KNLRVC DCH A K++S + GREIVLRD  RFHH ++G+CSC DYW
Sbjct: 656 AKNLRVCNDCHEAAKFLSKMVGREIVLRDVRRFHHFRNGQCSCGDYW 702



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 139/511 (27%), Positives = 259/511 (50%), Gaps = 29/511 (5%)

Query: 73  GNHPDLDTYSLLLKSCIRSRN--------FHLGKLVHSLLTRSKL--EPNSVILNSLISL 122
           G HP L +++L+  S +R+ +          LG+  H+   ++ L         N+L+S+
Sbjct: 4   GGHP-LTSFTLV--SVLRAVSHLPAAAAAVRLGREAHAFALKNGLLHGHQRFAFNALLSM 60

Query: 123 YSKCGDLNEANKIFKSMGNKR-DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           Y++ G + +A ++F      R D+V+W++M+S  V  G   +A+    +M+ LG  P+  
Sbjct: 61  YARLGLVADAQRLFAGATPGRGDVVTWNTMVSVLVQSGMFDEAVQTLYDMVALGVRPDGV 120

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F++ + ACS  E + +G  ++ +++K     ++  V  AL+DM+      +  A +VFD
Sbjct: 121 TFASALPACSRLELLDVGREMHAYVIKDDELAANSFVASALVDMYATHE-QVGKARQVFD 179

Query: 242 KMTE--KNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELEL 298
            + +  K    W  MI    Q G   +A+RLF  M   +GF+P   T++ V+ AC+  E 
Sbjct: 180 MVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARMEAEAGFVPCETTMASVLPACARSEA 239

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
           F   + +H + ++ G+A +  V  +L+DMYA+    G  D +R++F  +   +V+SW  +
Sbjct: 240 FAGKEAVHGYVVKRGMAGNRFVQNALMDMYARL---GKTDVARRIFAMVDLPDVVSWNTL 296

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQ---GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           ITG V   G   +A +L  +M Q   G V PN  T  ++L  C  L      ++++ +AV
Sbjct: 297 ITGCVVQ-GHVADAFQLAREMQQLEEGGVVPNAITLMTLLPGCAILAAPARGKEIHGYAV 355

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           +     D  VG++L+ MYA+ G +  +R  F+ L  +N +++N ++ AY  +    +A  
Sbjct: 356 RHALDTDVAVGSALVDMYAKCGCLALSRAVFDRLPRRNTITWNVLIMAYGMHGLGGEATV 415

Query: 476 LLHEIEDTGVG-TSAYTFASLLSGASSIGAIGKGEQI-HARIIKSGFESNHCIYNALISM 533
           L   +  +G    +  TF + L+  S  G + +G Q+ HA     G E    I   ++ +
Sbjct: 416 LFDRMTASGEARPNEVTFMAALAACSHSGMVDRGLQLFHAMERDHGVEPTPDILACVVDI 475

Query: 534 YSRCANVEAAFQVFKEME--DRNVISWTSMI 562
             R   ++ A+ +   ME  ++ V +W++M+
Sbjct: 476 LGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/422 (29%), Positives = 217/422 (51%), Gaps = 20/422 (4%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR-SKLEPN 112
           +  G   +A+ TL  M   G  PD  T++  L +C R     +G+ +H+ + +  +L  N
Sbjct: 95  VQSGMFDEAVQTLYDMVALGVRPDGVTFASALPACSRLELLDVGREMHAYVIKDDELAAN 154

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           S + ++L+ +Y+    + +A ++F  + +  + +  W++MI  Y   G   +A+ +F  M
Sbjct: 155 SFVASALVDMYATHEQVGKARQVFDMVPDSGKQLGMWNAMICGYAQAGMDEEALRLFARM 214

Query: 172 -LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
             E GF P E   ++V+ AC+ +E  A    ++G+++K G    +  V  AL+DM+ + G
Sbjct: 215 EAEAGFVPCETTMASVLPACARSEAFAGKEAVHGYVVKRG-MAGNRFVQNALMDMYARLG 273

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL---SGFLPDRFTL 286
             D+  A ++F  +   + V W  +IT C   G   DA +L  +M      G +P+  TL
Sbjct: 274 KTDV--ARRIFAMVDLPDVVSWNTLITGCVVQGHVADAFQLAREMQQLEEGGVVPNAITL 331

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
             ++  C+ L     GK++H +A+R  L  DV VG +LVDMYAKC   G +  SR VFDR
Sbjct: 332 MTLLPGCAILAAPARGKEIHGYAVRHALDTDVAVGSALVDMYAKC---GCLALSRAVFDR 388

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSN 405
           +   N ++W  +I  Y    G   EA  LF  M   G+  PN  TF + L AC +    +
Sbjct: 389 LPRRNTITWNVLIMAYGMH-GLGGEATVLFDRMTASGEARPNEVTFMAALAACSHSGMVD 447

Query: 406 VAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESL--FEKNLVSYNTMV 461
              Q++ HA++R   ++    +   ++ +  R+GR+++A     S+   E+ + +++TM+
Sbjct: 448 RGLQLF-HAMERDHGVEPTPDILACVVDILGRAGRLDEAYAMVTSMEAGEQQVSAWSTML 506

Query: 462 DA 463
            A
Sbjct: 507 GA 508


>gi|147770185|emb|CAN69881.1| hypothetical protein VITISV_024112 [Vitis vinifera]
          Length = 734

 Score =  461 bits (1185), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/710 (35%), Positives = 393/710 (55%), Gaps = 38/710 (5%)

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           S   +GK  +A     EM +       + +  +  AC    ++A G +I+  L +     
Sbjct: 61  SLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRRTVKNP 120

Query: 214 SDVCVGCALIDMFVK--GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           S     C L+ M+      +D++   KVFD+M  KN V W ++I+   + G    AIRLF
Sbjct: 121 SGSIENC-LLRMYCDCGSXIDVQ---KVFDEMLMKNLVSWVIVISAYAKNGELEKAIRLF 176

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            DM  SG  P+      ++ +C        GKQ+HS  IR  L  ++ V  ++ +MY +C
Sbjct: 177 SDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQMHSHVIRAQLNANITVETAICNMYVRC 236

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G ++ ++ VFD M   N ++WT ++ GY Q+  + + A++LF+ M    V  + F F
Sbjct: 237 ---GWLEGAKLVFDGMDAQNAVTWTGLMVGYTQAK-KLEVALELFARMAMEGVELDEFVF 292

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           + VLK C  L D ++ +Q+++H VK G   +  VG  L+  Y + G +E A ++F  + E
Sbjct: 293 SIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGTPLVDFYVKCGDIESAYRSFGRISE 352

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            N VS++ ++  ++++   E   ++   +   GV  +++ + S+    ++   +  G Q 
Sbjct: 353 PNDVSWSALISGFSQSGRLEDCIKIFTSLRSEGVVLNSFIYTSVFQACAAQANLNMGSQA 412

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   IK G  S     +A+++MYS+C  ++ A + F+ +++ + ++WT++I+G+A HG A
Sbjct: 413 HGDAIKRGLVSYLYGESAMVTMYSKCGRLDYARRAFESIDEPDAVAWTAIISGYAYHGNA 472

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
           A AL  F +M + G++PN +T+IAVL+ACSH+GL++E  ++  SM  ++G+   ++HY C
Sbjct: 473 AEALGFFRRMQSYGVRPNAVTFIAVLTACSHSGLVAEAKQYLGSMSRDYGVKPTIDHYDC 532

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           M+D   R+G L EALE I  MP   D + W++ LG C  H D +LGK AAE +   DP D
Sbjct: 533 MIDTYSRAGLLXEALELINRMPFEPDAMSWKSLLGGCWAHCDLKLGKIAAENLFRLDPGD 592

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
            A +ILL NLY++ G WE   ++RK M ER L KE  CSWI    +VH          + 
Sbjct: 593 TAGYILLFNLYSAFGKWEEAGHVRKLMAERELKKEVSCSWISVKGQVH----------RP 642

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
           + +  E D ++        LP             + + L  HSEK+A+AFGLIST  + P
Sbjct: 643 VRLLNEEDDVSCS------LP------------ARKEQLLDHSEKLAIAFGLISTEDNAP 684

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           I VFKNLR C DCH   K +SMVTGR+IV+RDS RFHH K GKCSCNDYW
Sbjct: 685 ILVFKNLRACRDCHEFGKQVSMVTGRQIVVRDSTRFHHFKSGKCSCNDYW 734



 Score =  246 bits (628), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 157/548 (28%), Positives = 282/548 (51%), Gaps = 9/548 (1%)

Query: 23  PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           PS  +L  SSS     +    +  +  L+     G++++A   L  M          +Y 
Sbjct: 32  PSWVSLKRSSSTIXTEKIQQGKLENLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQ 91

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            L ++C + R+   G+L+H  L R+   P+  I N L+ +Y  CG   +  K+F  M  K
Sbjct: 92  CLFEACGKLRSLADGRLIHDRLRRTVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMK 151

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
            ++VSW  +IS+Y   G+   AI +F +M   G  PN   + +++++C     + +G  +
Sbjct: 152 -NLVSWVIVISAYAKNGELEKAIRLFSDMQASGIRPNSAVYMSLLQSCLGPSFLELGKQM 210

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  +++    ++++ V  A+ +M+V+    LE A  VFD M  +N V WT ++   TQ  
Sbjct: 211 HSHVIR-AQLNANITVETAICNMYVRCGW-LEGAKLVFDGMDAQNAVTWTGLMVGYTQAK 268

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
               A+ LF  M + G   D F  S V+  C  LE +  GKQ+HS  ++ G   +V VG 
Sbjct: 269 KLEVALELFARMAMEGVELDEFVFSIVLKVCCXLEDWDMGKQIHSHIVKLGXESEVSVGT 328

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
            LVD Y KC   G ++ + + F R+ + N +SW+A+I+G+ QS GR ++ +K+F+ +   
Sbjct: 329 PLVDFYVKC---GDIESAYRSFGRISEPNDVSWSALISGFSQS-GRLEDCIKIFTSLRSE 384

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V  N F + SV +AC    + N+  Q +  A+KRG        +++++MY++ GR++ A
Sbjct: 385 GVVLNSFIYTSVFQACAAQANLNMGSQAHGDAIKRGLVSYLYGESAMVTMYSKCGRLDYA 444

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R+AFES+ E + V++  ++  YA + N+ +A      ++  GV  +A TF ++L+  S  
Sbjct: 445 RRAFESIDEPDAVAWTAIISGYAYHGNAAEALGFFRRMQSYGVRPNAVTFIAVLTACSHS 504

Query: 503 GAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTS 560
           G + + +Q    + +  G +     Y+ +I  YSR   +  A ++   M  + + +SW S
Sbjct: 505 GLVAEAKQYLGSMSRDYGVKPTIDHYDCMIDTYSRAGLLXEALELINRMPFEPDAMSWKS 564

Query: 561 MITGFAKH 568
           ++ G   H
Sbjct: 565 LLGGCWAH 572



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 40/143 (27%), Positives = 77/143 (53%)

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N  + + +K    ++A + L E++D  V  + +++  L      + ++  G  IH R+ +
Sbjct: 56  NLHLVSLSKQGKLKEAHDFLKEMDDADVSVTPHSYQCLFEACGKLRSLADGRLIHDRLRR 115

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +    +  I N L+ MY  C +     +VF EM  +N++SW  +I+ +AK+G   +A+ +
Sbjct: 116 TVKNPSGSIENCLLRMYCDCGSXIDVQKVFDEMLMKNLVSWVIVISAYAKNGELEKAIRL 175

Query: 578 FYKMLADGIKPNGITYIAVLSAC 600
           F  M A GI+PN   Y+++L +C
Sbjct: 176 FSDMQASGIRPNSAVYMSLLQSC 198


>gi|449520177|ref|XP_004167110.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 252/710 (35%), Positives = 387/710 (54%), Gaps = 86/710 (12%)

Query: 232 DLESAYKVFD--KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +LE   ++F+   +  +++V +  MIT     G    A+ LF  M    F PD FT + V
Sbjct: 94  NLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSV 153

Query: 290 VSACSELELFTSGKQ----LHSWAIRTGLALDVCVGCS----LVDMYAKCTVDGSVD--- 338
           +SA   L LF   +Q    +H   ++TG+    CV  S    L+ +Y K   +  +    
Sbjct: 154 LSA---LVLFVGNEQQCGQMHCAVVKTGMG---CVSSSVLNALLSVYVKRASELGISCSA 207

Query: 339 --DSRKVFDRMLDHNVMSWTAIITGYVQS----GGRD----------------------- 369
              +RK+FD M   + ++WT +ITGYV++    G R+                       
Sbjct: 208 MVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHC 267

Query: 370 ---KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK---------- 416
              +EA+ L   M    +  +  T+ +++ AC N+    + +QV+ + +K          
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFC 327

Query: 417 ------------RGRALDDC-------------VGNSLISMYARSGRMEDARKAFESLFE 451
                       +   +D+                N+++S Y  +GRME+A+  FE +  
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           KNL++   M+   A+N   ++  +L  ++   G     + FA  L+  S +GA+  G Q+
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA+++  G+ES+  + NA+ISMY++C  VEAA  VF  M   +++SW SMI    +HG  
Sbjct: 448 HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHG 507

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
            +A+E+F +ML +G+ P+ IT++ VL+ACSHAGL+ +G  +F SM + +GI    +HYA 
Sbjct: 508 VKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYAR 567

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           MVDL  R+G  + A   I SMP      VW   L  CR+HG+ +LG  AAE + +  PQ+
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQN 627

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              ++LLSN+YA  G W  VA +RK M+++ + KE  CSWIE +NKVH F V +  HP+ 
Sbjct: 628 DGTYVLLSNIYADVGRWNEVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEV 687

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
           L +Y  L+QL L++K+ GY+PDT FVLH++E EQK   L  HSEK+AV FG++       
Sbjct: 688 LSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPGAT 747

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +RVFKN+R+CGDCH A K++S V  REI++RD  RFHH K+G CSC DYW
Sbjct: 748 VRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 157/646 (24%), Positives = 268/646 (41%), Gaps = 135/646 (20%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK---------- 142
           +F L + VH+ +  S  +P    LN L+ +Y K  +L  A ++F+ + N           
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNPDAIARTTLIT 87

Query: 143 ----------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
                                 RD V +++MI+ Y + G    A+ +F  M    F P++
Sbjct: 88  AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC---VGC-------ALIDMFVKGS 230
           + F++V+ A           +  G   +CG     V    +GC       AL+ ++VK +
Sbjct: 148 FTFTSVLSALV---------LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRA 198

Query: 231 VDLE-------SAYKVFDKMTEKNTVGWTLMITRCTQ----------------------- 260
            +L        SA K+FD+M +++ + WT MIT   +                       
Sbjct: 199 SELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWN 258

Query: 261 --------LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
                    GC ++A+ L   M   G   D  T + ++SAC+ +  F  GKQ+H++ ++ 
Sbjct: 259 AMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKN 318

Query: 313 GL----ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-- 366
            L    +  + V  +L+ +Y K   +  VD++RK+F  M   N+++W AI++GYV +G  
Sbjct: 319 ELNPNHSFCLSVSNALITLYCK---NNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRM 375

Query: 367 ----------------------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
                                       G   E +KLF  M      P  F FA  L AC
Sbjct: 376 EEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTAC 435

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
             L       Q++   V  G      VGN++ISMYA+ G +E A   F ++   +LVS+N
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           +M+ A  ++ +  KA EL  ++   GV     TF ++L+  S  G + KG      +++S
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555

Query: 519 -GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG---FAAR 573
            G       Y  ++ ++ R      A  V   M  +     W +++ G   HG       
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           A E  +K++      N  TY+ + +  +  G  +E  K  + M D+
Sbjct: 616 AAEQLFKLMPQ----NDGTYVLLSNIYADVGRWNEVAKVRKLMRDQ 657



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 136/570 (23%), Positives = 234/570 (41%), Gaps = 127/570 (22%)

Query: 260 QLGCPRDAIRLFL------DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           QL  P+D     L       MI SGF P    L+ ++    +       +QL        
Sbjct: 19  QLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNLVYARQLFEEIPNP- 77

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLDHNVMSWTAIITGYVQSGGRDKE 371
              D     +L+  Y  C + G+++  R++F+   +   + + + A+ITGY  +G     
Sbjct: 78  ---DAIARTTLITAY--CAL-GNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD-GHS 130

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKA----------CGNL-----------LDSNVAEQV 410
           A++LF  M +    P+ FTF SVL A          CG +           + S+V   +
Sbjct: 131 ALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNAL 190

Query: 411 YTHAVKRGRAL--------------------DDCVGNSLISMYARSGRMEDARKAFESLF 450
            +  VKR   L                    D+    ++I+ Y R+  +  AR+ FE++ 
Sbjct: 191 LSVYVKRASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMV 250

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E    ++N M+  Y      ++A  L  ++   G+     T+ +++S  +++G+   G+Q
Sbjct: 251 ENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQ 310

Query: 511 IHARIIKSGFESNH----CIYNALISMYSRCANVEAAFQVFKEMEDRNVISW-------- 558
           +HA I+K+    NH     + NALI++Y +   V+ A ++F  M  RN+I+W        
Sbjct: 311 VHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYV 370

Query: 559 -----------------------TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
                                  T MI+G A++GF    L++F +M  DG +P    +  
Sbjct: 371 NAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAG 430

Query: 596 VLSACS-----------HAGLISEGWKH-------FRSMYDEHGIVQRME---------- 627
            L+ACS           HA L+  G++          SMY + G+V+  E          
Sbjct: 431 ALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVD 490

Query: 628 --HYACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +  M+  LG+ G   +A+E    M    +  D + + T L AC   G  E G+H   
Sbjct: 491 LVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFN 550

Query: 683 MILEQDPQDPAA--HILLSNLYASAGHWEY 710
            +LE     P    +  + +L+  AG + Y
Sbjct: 551 SMLESYGITPCEDHYARMVDLFCRAGMFSY 580



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/366 (29%), Positives = 168/366 (45%), Gaps = 48/366 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--- 113
           G  Q+A+     M   G   D  TY+ ++ +C    +F +GK VH+ + +++L PN    
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFC 327

Query: 114 -VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM- 171
             + N+LI+LY K   ++EA KIF +M   R+I++W++++S YVN G+  +A   F EM 
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAM-PVRNIITWNAILSGYVNAGRMEEAKSFFEEMP 386

Query: 172 -----------------------LEL-------GFCPNEYCFSAVIRACSNTENVAIGHI 201
                                  L+L       GF P ++ F+  + ACS    +  G  
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++  L+  GY +S + VG A+I M+ K  V +E+A  VF  M   + V W  MI    Q 
Sbjct: 447 LHAQLVHLGY-ESSLSVGNAMISMYAKCGV-VEAAESVFVTMPSVDLVSWNSMIAALGQH 504

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G    AI LF  M+  G  PDR T   V++ACS   L   G+   +  + +   +  C  
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES-YGITPCED 563

Query: 322 --CSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAIITGYVQSGGRD---KEAVKL 375
               +VD++ +    G    +R V D M        W A++ G    G  D   + A +L
Sbjct: 564 HYARMVDLFCRA---GMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620

Query: 376 FSDMIQ 381
           F  M Q
Sbjct: 621 FKLMPQ 626



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 54/320 (16%)

Query: 422 DDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           D     +LI+ Y   G +E  R+ F    L+ ++ V YN M+  YA N +   A EL   
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 480 IEDTGVGTSAYTFASLLSG-ASSIGAIGKGEQIHARIIKSGFES-NHCIYNALISMYSR- 536
           +         +TF S+LS     +G   +  Q+H  ++K+G    +  + NAL+S+Y + 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 537 -------CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
                  C+ + +A ++F EM  R+ ++WT+MITG+ ++     A E+F  M    ++  
Sbjct: 198 ASELGISCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM----VENL 253

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
           G  + A++S   H G   E     R M                                 
Sbjct: 254 GAAWNAMISGYVHCGCFQEALTLCRKM--------------------------------- 280

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL-----LSNLYAS 704
           R + +  D + + T + AC   G  ++GK     IL+ +     +  L     L  LY  
Sbjct: 281 RFLGIQFDDITYTTIISACANVGSFQMGKQVHAYILKNELNPNHSFCLSVSNALITLYCK 340

Query: 705 AGHWEYVANIRKRMKERNLI 724
               +    I   M  RN+I
Sbjct: 341 NNKVDEARKIFYAMPVRNII 360


>gi|242082744|ref|XP_002441797.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
 gi|241942490|gb|EES15635.1| hypothetical protein SORBIDRAFT_08g002505 [Sorghum bicolor]
          Length = 839

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/716 (33%), Positives = 414/716 (57%), Gaps = 8/716 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  PD  T ++LLK+C    +  LG  +H++  ++ LE +    ++L+ +Y KC  
Sbjct: 127 MARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRS 186

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L +A + F  MG +R+ VSW + I+  V   +    + +FV+M  LG   ++  +++V R
Sbjct: 187 LEDALRFFHGMG-ERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFR 245

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           +C+    ++    ++   +K   F +D  VG A++D++ K    L  A + F  +     
Sbjct: 246 SCAAITCLSTARQLHAHAIK-NKFSADRVVGTAIVDVYAKAD-SLVDARRAFFSLPNHTV 303

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
                M+    + G   +A++LF  M  SG   D  +LSGV SAC+E++ +  G Q+H  
Sbjct: 304 QACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCL 363

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           AI++G  +DVCV  +++D+Y KC    ++ ++  VF  M   + +SW AII    Q+   
Sbjct: 364 AIKSGFDVDVCVRNAILDLYGKCK---ALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 420

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           + + +   ++M++  + P+ FT+ SVLKAC  L        V+  A+K G  LD  V ++
Sbjct: 421 E-DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSST 479

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           ++ MY + G + +A+K  + +  + LVS+N+++  ++ N  SE+A +   E+ D GV   
Sbjct: 480 VVDMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPD 539

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            +T+A++L   +++  I  G+QIH +IIK     +  I + L+ MY++C N+  +  +F+
Sbjct: 540 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE 599

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           + +  + +SW +MI G+A HG    ALE+F +M    + PN  T++AVL ACSH GL+ +
Sbjct: 600 KAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLLDD 659

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           G ++F  M   + +  ++EH+ACMVD+LGRS    EAL+FIRSMPL AD ++W+T L  C
Sbjct: 660 GCRYFYLMTSRYKLEPQLEHFACMVDILGRSKGPQEALKFIRSMPLEADAVIWKTLLSIC 719

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           ++  D E+ + AA  +L  DP D + +ILLSN+YA +G W  V+  R+ M++  L KE G
Sbjct: 720 KIRQDVEVAETAASNVLRLDPDDSSVYILLSNVYAESGKWVDVSRTRRLMRQGRLKKEPG 779

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEE 784
           CSWIE  +++H F  G+  HP++ E+Y  L+ L +++K  GY P  + +  E++EE
Sbjct: 780 CSWIEVQSEMHGFLAGDKVHPRSREVYEMLNNLIVEMKLSGYEP-ASALFAEVDEE 834



 Score =  249 bits (635), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 156/573 (27%), Positives = 295/573 (51%), Gaps = 14/573 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++V  N++++ Y+  GD   A  +F +M +  D+VSW++++S Y  RG   D++ + VEM
Sbjct: 69  DTVSWNTMLTAYAHAGDTGAAASLFGAMPDP-DVVSWNALLSGYCQRGMFRDSVGLSVEM 127

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+    + +++AC   E++A+G  I+   +K G  + DV  G AL+DM+ K   
Sbjct: 128 ARRGVAPDRTTLAVLLKACGGLEDLALGVQIHAVAVKTG-LEMDVRAGSALVDMYGK-CR 185

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            LE A + F  M E+N+V W   I  C Q       + LF+ M   G    +   + V  
Sbjct: 186 SLEDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFR 245

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +C+ +   ++ +QLH+ AI+   + D  VG ++VD+YAK     S+ D+R+ F  + +H 
Sbjct: 246 SCAAITCLSTARQLHAHAIKNKFSADRVVGTAIVDVYAKAD---SLVDARRAFFSLPNHT 302

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V +  A++ G V++ G   EA++LF  M +  +  +  + + V  AC  +       QV+
Sbjct: 303 VQACNAMMVGLVRT-GLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVH 361

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             A+K G  +D CV N+++ +Y +   + +A   F+ + +++ VS+N ++ A  +N   E
Sbjct: 362 CLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQNECYE 421

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
                L+E+   G+    +T+ S+L   + + ++  G  +H + IKSG   +  + + ++
Sbjct: 422 DTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTVV 481

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  +  A ++   +  + ++SW S+I+GF+ +  +  A + F +ML  G+KP+  
Sbjct: 482 DMYCKCGMITEAQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPDHF 541

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEFIR 650
           TY  VL  C++   I  G K       +  ++      + +VD+  + G++ ++ L F +
Sbjct: 542 TYATVLDTCANLATIELG-KQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFEK 600

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
           +  L  D + W   +    +HG    G  A EM
Sbjct: 601 AQKL--DFVSWNAMICGYALHGQ---GFEALEM 628



 Score =  179 bits (453), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 113/371 (30%), Positives = 194/371 (52%), Gaps = 10/371 (2%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F + P  +    N ++  L   G   +A+     MT+ G   D+ + S +  +C   + +
Sbjct: 295 FFSLPNHTVQACNAMMVGLVRTGLGAEALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGY 354

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G  VH L  +S  + +  + N+++ LY KC  L EA  +F+ M  +RD VSW+++I++
Sbjct: 355 LQGLQVHCLAIKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAA 413

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
                   D I    EML  G  P+++ + +V++AC+  +++  G +++G  +K G    
Sbjct: 414 LEQNECYEDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSG-LGL 472

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D  V   ++DM+ K  +  E A K+ D++  +  V W  +I+  +      +A + F +M
Sbjct: 473 DAFVSSTVVDMYCKCGMITE-AQKLHDRIGGQELVSWNSIISGFSLNKQSEEAQKFFSEM 531

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +  G  PD FT + V+  C+ L     GKQ+H   I+  +  D  +  +LVDMYAKC   
Sbjct: 532 LDIGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKC--- 588

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G++ DS  +F++    + +SW A+I GY    G+  EA+++F  M Q  V PNH TF +V
Sbjct: 589 GNMPDSLLMFEKAQKLDFVSWNAMICGYALH-GQGFEALEMFERMQQANVVPNHATFVAV 647

Query: 395 LKACGN--LLD 403
           L+AC +  LLD
Sbjct: 648 LRACSHVGLLD 658



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 107/399 (26%), Positives = 192/399 (48%), Gaps = 20/399 (5%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA-LDVCVGCSLVDMYAKCT 332
           M++SGF+P  F     VS C        G   H+  +   +   D     +++  YA   
Sbjct: 30  MLVSGFMPTTF-----VSNCLLQMYARCGGAAHARGVFDVMPHRDTVSWNTMLTAYAHA- 83

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G    +  +F  M D +V+SW A+++GY Q G   +++V L  +M +  VAP+  T A
Sbjct: 84  --GDTGAAASLFGAMPDPDVVSWNALLSGYCQRG-MFRDSVGLSVEMARRGVAPDRTTLA 140

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
            +LKACG L D  +  Q++  AVK G  +D   G++L+ MY +   +EDA + F  + E+
Sbjct: 141 VLLKACGGLEDLALGVQIHAVAVKTGLEMDVRAGSALVDMYGKCRSLEDALRFFHGMGER 200

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           N VS+   +    +N    +  EL  +++  G+G S   +AS+    ++I  +    Q+H
Sbjct: 201 NSVSWGAAIAGCVQNEQYTRGLELFVQMQRLGLGVSQPAYASVFRSCAAITCLSTARQLH 260

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           A  IK+ F ++  +  A++ +Y++  ++  A + F  + +  V +  +M+ G  + G  A
Sbjct: 261 AHAIKNKFSADRVVGTAIVDVYAKADSLVDARRAFFSLPNHTVQACNAMMVGLVRTGLGA 320

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK----HFRSMYDEHGIVQRMEH 628
            AL++F  M   GI  + ++   V SAC+      +G +      +S +D    V+    
Sbjct: 321 EALQLFQFMTRSGIGFDVVSLSGVFSACAEVKGYLQGLQVHCLAIKSGFDVDVCVRN--- 377

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
              ++DL G+  +L EA    + M    D + W   + A
Sbjct: 378 --AILDLYGKCKALVEAYLVFQEME-QRDSVSWNAIIAA 413



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 126/243 (51%), Gaps = 3/243 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           +  I  L+ M + G  PD  TY  +LK+C   ++   G +VH    +S L  ++ + +++
Sbjct: 421 EDTIAYLNEMLRYGMEPDDFTYGSVLKACAGLQSLEYGSVVHGKAIKSGLGLDAFVSSTV 480

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + +Y KCG + EA K+   +G + ++VSW+S+IS +    +  +A   F EML++G  P+
Sbjct: 481 VDMYCKCGMITEAQKLHDRIGGQ-ELVSWNSIISGFSLNKQSEEAQKFFSEMLDIGVKPD 539

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
            + ++ V+  C+N   + +G  I+G ++K      D  +   L+DM+ K   ++  +  +
Sbjct: 540 HFTYATVLDTCANLATIELGKQIHGQIIKQEML-GDEYISSTLVDMYAKCG-NMPDSLLM 597

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F+K  + + V W  MI      G   +A+ +F  M  +  +P+  T   V+ ACS + L 
Sbjct: 598 FEKAQKLDFVSWNAMICGYALHGQGFEALEMFERMQQANVVPNHATFVAVLRACSHVGLL 657

Query: 300 TSG 302
             G
Sbjct: 658 DDG 660



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 86/213 (40%), Gaps = 33/213 (15%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T+ ++    L   +   A+  G+  HAR++ SGF     + N L+ MY+RC     A  V
Sbjct: 2   TATFSHLYQLCAGAGRSALATGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGAAHARGV 61

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIF---------------------------- 578
           F  M  R+ +SW +M+T +A  G    A  +F                            
Sbjct: 62  FDVMPHRDTVSWNTMLTAYAHAGDTGAAASLFGAMPDPDVVSWNALLSGYCQRGMFRDSV 121

Query: 579 ---YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
               +M   G+ P+  T   +L AC     ++ G +   ++  + G+   +   + +VD+
Sbjct: 122 GLSVEMARRGVAPDRTTLAVLLKACGGLEDLALGVQ-IHAVAVKTGLEMDVRAGSALVDM 180

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
            G+  SL +AL F   M    + + W   +  C
Sbjct: 181 YGKCRSLEDALRFFHGMG-ERNSVSWGAAIAGC 212


>gi|15227724|ref|NP_178481.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206038|sp|Q9SI53.1|PP147_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g03880, mitochondrial; Flags: Precursor
 gi|4582435|gb|AAD24821.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|330250668|gb|AEC05762.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  460 bits (1184), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 232/613 (37%), Positives = 370/613 (60%), Gaps = 12/613 (1%)

Query: 252 TLMITRCTQLGCPRDAIRLF--LDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           TL+++  T+L   RD  R    +D + S G   D  T S ++  C        G  +   
Sbjct: 27  TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
               G    + +   L++MY K  +   ++D+ ++FD+M   NV+SWT +I+ Y +    
Sbjct: 87  LYFNGHRPMMFLVNVLINMYVKFNL---LNDAHQLFDQMPQRNVISWTTMISAYSKCKIH 143

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            K A++L   M++  V PN +T++SVL++C  + D      ++   +K G   D  V ++
Sbjct: 144 QK-ALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD---VRMLHCGIIKEGLESDVFVRSA 199

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI ++A+ G  EDA   F+ +   + + +N+++  +A+N  S+ A EL   ++  G    
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             T  S+L   + +  +  G Q H  I+K  ++ +  + NAL+ MY +C ++E A +VF 
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFN 317

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           +M++R+VI+W++MI+G A++G++  AL++F +M + G KPN IT + VL ACSHAGL+ +
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           GW +FRSM   +GI    EHY CM+DLLG++G L +A++ +  M    D + WRT LGAC
Sbjct: 378 GWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           RV  +  L ++AA+ ++  DP+D   + LLSN+YA++  W+ V  IR RM++R + KE G
Sbjct: 438 RVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPG 497

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
           CSWIE + ++H F +G+ SHP+ +E+  +L+QL  ++   GY+P+TNFVL +LE EQ   
Sbjct: 498 CSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMED 557

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
            L  HSEK+A+AFGL++    K IR+ KNLR+CGDCH   K  S +  R IV+RD  R+H
Sbjct: 558 SLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYH 617

Query: 849 HIKDGKCSCNDYW 861
           H +DGKCSC DYW
Sbjct: 618 HFQDGKCSCGDYW 630



 Score =  190 bits (482), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 224/425 (52%), Gaps = 31/425 (7%)

Query: 48  NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS 107
            RL Y  +  R  KA   +D +   G   D  TYS L+K CI +R  H G L+   L  +
Sbjct: 34  TRLCYQRDLPRAMKA---MDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
              P   ++N LI++Y K   LN+A+++F  M  +R+++SW++MIS+Y        A+ +
Sbjct: 91  GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALEL 149

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY----FDSDVCVGCALI 223
            V ML     PN Y +S+V+R+C+   +V + H        CG      +SDV V  ALI
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLH--------CGIIKEGLESDVFVRSALI 201

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           D+F K   + E A  VFD+M   + + W  +I    Q      A+ LF  M  +GF+ ++
Sbjct: 202 DVFAKLG-EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            TL+ V+ AC+ L L   G Q H   ++     D+ +  +LVDMY KC   GS++D+ +V
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKC---GSLEDALRV 315

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--L 401
           F++M + +V++W+ +I+G  Q+ G  +EA+KLF  M      PN+ T   VL AC +  L
Sbjct: 316 FNQMKERDVITWSTMISGLAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYN 458
           L+       Y  ++K+   +D    +   +I +  ++G+++DA K    +  E + V++ 
Sbjct: 375 LEDG---WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431

Query: 459 TMVDA 463
           T++ A
Sbjct: 432 TLLGA 436


>gi|297844796|ref|XP_002890279.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336121|gb|EFH66538.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 953

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/788 (32%), Positives = 425/788 (53%), Gaps = 21/788 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  ++K+C    +  +G  VH L+ ++ L  +  + N+L+S Y   G +++A K+
Sbjct: 185 PDNFTFPCVIKACAGISDVGIGLAVHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKL 244

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +R++VSW+SMI  + + G             +  F P+      V+  C+    
Sbjct: 245 FDIM-PERNLVSWNSMIRVFSDNGD------------DGAFMPDVATVVTVLPVCARERE 291

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +G  ++G+ +K    D ++ V  AL+DM+ K    ++S   +F     KN V W  M+
Sbjct: 292 IGVGKGVHGWAVKLS-LDKELVVNNALMDMYSKWGCIIDSQM-IFKLNNNKNVVSWNTMV 349

Query: 256 TRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
              +  G       L   M+        D  T+   V  C +  +  S K+LH ++++  
Sbjct: 350 GGFSAEGDIHGTFDLLRQMLAGSEDVKADEVTILNAVPVCFDESVLPSLKELHCYSLKQE 409

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              D  +  + V  YAKC   GS+  +++VF  +    + SW A+I GY QS    + ++
Sbjct: 410 FVYDELLANAFVASYAKC---GSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSD-PRLSL 465

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
                M    + P++FT  S+L AC  L    + ++V+   ++     D  V  S++S+Y
Sbjct: 466 DAHLQMKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLY 525

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
              G +   +  F+++ + +LVS+NT++  + +N   E+A  L  ++   G+     +  
Sbjct: 526 IHCGELCTVQVLFDAMEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMM 585

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           ++    S + ++  G + HA  +K   E N  I  ++I MY++   +  + +VF  ++++
Sbjct: 586 TVFGACSLLPSLRLGREAHAYALKHLLEDNAFIACSIIDMYAKNGAITQSSKVFNGLKEK 645

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +  SW +MI G+  HG A  A+++F +M   G  P+ +T++ VL+AC+H+GL+ EG ++ 
Sbjct: 646 SAASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYL 705

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M    G+   ++HYAC++D+LGR+G L  AL     M    DV +W + L  CR+H +
Sbjct: 706 DQMKSSFGLKPNLKHYACVIDMLGRAGQLDNALRVAAEMSEEPDVGIWNSLLSWCRIHQN 765

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            E+G+  A  +   +P+ P  ++LLSNLYA  G W+ V  +R+RMKE +L K+AGCSWIE
Sbjct: 766 LEMGEKVAAKLFVLEPEKPENYVLLSNLYAGLGKWDDVRQVRQRMKEMSLRKDAGCSWIE 825

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
            + KV  F VGE       EI +    L +KI + GY PDT+ V H+L EE+K++ L  H
Sbjct: 826 LNGKVFSFVVGERFLDGFEEIKSLWSILEMKIWKMGYRPDTSSVQHDLSEEEKIEQLRGH 885

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+ +GLI TS+   +RV+KNLR+C DCH A K IS V  REIV+RD+ RFHH   G
Sbjct: 886 SEKLAITYGLIKTSEGTTLRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFNKG 945

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 946 FCSCGDYW 953



 Score =  242 bits (618), Expect = 5e-61,   Method: Compositional matrix adjust.
 Identities = 155/577 (26%), Positives = 308/577 (53%), Gaps = 36/577 (6%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +   LLL++  + ++  +G+ +H L++ S +L  + V+   +I++Y+ CG  +++   F 
Sbjct: 85  EALGLLLQASGKRKDIEMGRKIHHLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFD 144

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENV 196
           ++ +K ++  W+++ISSY       + + MF++M+ +    P+ + F  VI+AC+   +V
Sbjct: 145 ALRSK-NLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDV 203

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
            IG  ++G ++K G  + D+ VG AL+  +   G V    A K+FD M E+N V W  M 
Sbjct: 204 GIGLAVHGLVVKTGLVE-DLFVGNALVSFYGTHGFV--SDALKLFDIMPERNLVSWNSM- 259

Query: 256 TRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
                       IR+F D    G F+PD  T+  V+  C+       GK +H WA++  L
Sbjct: 260 ------------IRVFSDNGDDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSL 307

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             ++ V  +L+DMY+K    G + DS+ +F    + NV+SW  ++ G+  + G       
Sbjct: 308 DKELVVNNALMDMYSKW---GCIIDSQMIFKLNNNKNVVSWNTMVGGF-SAEGDIHGTFD 363

Query: 375 LFSDMIQG--QVAPNHFTFASVLKACGNLLDSNV---AEQVYTHAVKRGRALDDCVGNSL 429
           L   M+ G   V  +  T  + +  C    D +V    ++++ +++K+    D+ + N+ 
Sbjct: 364 LLRQMLAGSEDVKADEVTILNAVPVC---FDESVLPSLKELHCYSLKQEFVYDELLANAF 420

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           ++ YA+ G +  A++ F  +  K L S+N ++  YA++ +   + +   +++++G+    
Sbjct: 421 VASYAKCGSLSYAQRVFHGIRSKTLNSWNALIGGYAQSSDPRLSLDAHLQMKNSGLLPDN 480

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +T  SLLS  S + ++  G+++H  II++  E +  +Y +++S+Y  C  +     +F  
Sbjct: 481 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQVLFDA 540

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           MED +++SW ++ITG  ++GF  RAL +F +M+  GI+P GI+ + V  ACS    +  G
Sbjct: 541 MEDNSLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLG 600

Query: 610 WKHFRSMYDEHGIVQRMEHYAC-MVDLLGRSGSLTEA 645
            +     Y    +++     AC ++D+  ++G++T++
Sbjct: 601 RE--AHAYALKHLLEDNAFIACSIIDMYAKNGAITQS 635



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 170/353 (48%), Gaps = 27/353 (7%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD  T   LL +C + ++  LGK VH  + R+ LE +  +  S++SLY  CG+
Sbjct: 471 MKNSGLLPDNFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGE 530

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L     +F +M +   +VSW+++I+ ++  G    A+ +F +M+  G  P       V  
Sbjct: 531 LCTVQVLFDAMEDN-SLVSWNTVITGHLQNGFPERALGLFRQMVLYGIQPCGISMMTVFG 589

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           ACS   ++ +G   + + LK    + +  + C++IDM+ K     +S+ KVF+ + EK+ 
Sbjct: 590 ACSLLPSLRLGREAHAYALK-HLLEDNAFIACSIIDMYAKNGAITQSS-KVFNGLKEKSA 647

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-----K 303
             W  MI      G  ++AI+LF +M  +G  PD  T  GV++AC+   L   G     +
Sbjct: 648 ASWNAMIMGYGMHGRAKEAIKLFEEMQRTGRNPDDLTFLGVLTACNHSGLLHEGLRYLDQ 707

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-------HNVMSWT 356
              S+ ++  L    CV    +DM  +    G +D++ +V   M +       ++++SW 
Sbjct: 708 MKSSFGLKPNLKHYACV----IDMLGRA---GQLDNALRVAAEMSEEPDVGIWNSLLSWC 760

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            I    ++ G  +K A KLF  +++ +   N+   +++    G   D     Q
Sbjct: 761 RIHQN-LEMG--EKVAAKLF--VLEPEKPENYVLLSNLYAGLGKWDDVRQVRQ 808



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 137/289 (47%), Gaps = 30/289 (10%)

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRAL--DDCVGNSLISMYARSGRMEDARKAFESLFE 451
           +L+A G   D  +  +++ H V     L  DD +   +I+MYA  G  +D+R AF++L  
Sbjct: 90  LLQASGKRKDIEMGRKIH-HLVSGSTRLRSDDVLCTRIITMYAMCGSPDDSRSAFDALRS 148

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFEL-LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           KNL  +N ++ +Y++N    +  E+ +  I  T +    +TF  ++   + I  +G G  
Sbjct: 149 KNLFQWNAVISSYSRNELYHEVLEMFIKMISKTHLLPDNFTFPCVIKACAGISDVGIGLA 208

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H  ++K+G   +  + NAL+S Y     V  A ++F  M +RN++SW SMI  F+ +G 
Sbjct: 209 VHGLVVKTGLVEDLFVGNALVSFYGTHGFVSDALKLFDIMPERNLVSWNSMIRVFSDNG- 267

Query: 571 AARALEIFYKMLADG-IKPNGITYIAVLSACSH-----AGLISEGWKHFRSMYDEHGIVQ 624
                        DG   P+  T + VL  C+       G    GW    S+ D+  +V 
Sbjct: 268 ------------DDGAFMPDVATVVTVLPVCAREREIGVGKGVHGWAVKLSL-DKELVVN 314

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
                  ++D+  + G + ++ + I  +  + +V+ W T +G     GD
Sbjct: 315 N-----ALMDMYSKWGCIIDS-QMIFKLNNNKNVVSWNTMVGGFSAEGD 357



 Score = 73.2 bits (178), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/208 (25%), Positives = 105/208 (50%), Gaps = 5/208 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           HL +G  ++A+     M   G  P   +   +  +C    +  LG+  H+   +  LE N
Sbjct: 556 HLQNGFPERALGLFRQMVLYGIQPCGISMMTVFGACSLLPSLRLGREAHAYALKHLLEDN 615

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I  S+I +Y+K G + +++K+F  +  ++   SW++MI  Y   G+  +AI +F EM 
Sbjct: 616 AFIACSIIDMYAKNGAITQSSKVFNGL-KEKSAASWNAMIMGYGMHGRAKEAIKLFEEMQ 674

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSV 231
             G  P++  F  V+ AC+++  +  G + Y   +K  +    ++     +IDM  +   
Sbjct: 675 RTGRNPDDLTFLGVLTACNHSGLLHEG-LRYLDQMKSSFGLKPNLKHYACVIDMLGRAG- 732

Query: 232 DLESAYKVFDKMTEKNTVG-WTLMITRC 258
            L++A +V  +M+E+  VG W  +++ C
Sbjct: 733 QLDNALRVAAEMSEEPDVGIWNSLLSWC 760


>gi|15223802|ref|NP_173449.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806503|sp|Q9LNU6.2|PPR53_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g20230
 gi|332191832|gb|AEE29953.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 760

 Score =  460 bits (1183), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/693 (34%), Positives = 376/693 (54%), Gaps = 74/693 (10%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           V   + +     ++ +I   T+      +I +F  M   G +PD   L  +   C+EL  
Sbjct: 72  VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-------- 350
           F  GKQ+H  +  +GL +D  V  S+  MY +C   G + D+RKVFDRM D         
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC---GRMGDARKVFDRMSDKDVVTCSAL 188

Query: 351 ---------------------------NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                                      N++SW  I++G+ +SG   KEAV +F  +    
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG-YHKEAVVMFQKIHHLG 247

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM---- 439
             P+  T +SVL + G+    N+   ++ + +K+G   D CV +++I MY +SG +    
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307

Query: 440 ---------------------------EDARKAFE----SLFEKNLVSYNTMVDAYAKNL 468
                                      + A + FE       E N+VS+ +++   A+N 
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              +A EL  E++  GV  +  T  S+L    +I A+G G   H   ++     N  + +
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ALI MY++C  +  +  VF  M  +N++ W S++ GF+ HG A   + IF  ++   +KP
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + I++ ++LSAC   GL  EGWK+F+ M +E+GI  R+EHY+CMV+LLGR+G L EA + 
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ MP   D  VW   L +CR+  + +L + AAE +   +P++P  ++LLSN+YA+ G W
Sbjct: 548 IKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMW 607

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             V +IR +M+   L K  GCSWI+  N+V+    G+ SHP+  +I  ++D+++ ++++ 
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           G+ P+ +F LH++EE+++ Q L+ HSEK+AV FGL++T    P++V KNLR+CGDCH  I
Sbjct: 668 GHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVI 727

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS   GREI +RD+NRFHH KDG CSC D+W
Sbjct: 728 KFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  176 bits (446), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 128/516 (24%), Positives = 241/516 (46%), Gaps = 87/516 (16%)

Query: 50  LIYHLNDGRV-QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           LIY L   ++  ++I     M   G  PD      L K C     F +GK +H +   S 
Sbjct: 87  LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-------------------------- 142
           L+ ++ +  S+  +Y +CG + +A K+F  M +K                          
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206

Query: 143 --------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
                    +IVSW+ ++S +   G   +A+ MF ++  LGFCP++   S+V+ +  ++E
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-----VKGSVDL---------------- 233
            + +G +I+G+++K G    D CV  A+IDM+     V G + L                
Sbjct: 267 MLNMGRLIHGYVIKQGLL-KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYI 325

Query: 234 ---------ESAYKVFDKMTEK----NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
                    + A ++F+   E+    N V WT +I  C Q G   +A+ LF +M ++G  
Sbjct: 326 TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+  T+  ++ AC  +     G+  H +A+R  L  +V VG +L+DMYAKC   G ++ S
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC---GRINLS 442

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           + VF+ M   N++ W +++ G+    G+ KE + +F  +++ ++ P+  +F S+L ACG 
Sbjct: 443 QIVFNMMPTKNLVCWNSLMNGFSMH-GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501

Query: 401 LLDSNVAEQVYT-----HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNL 454
           +  ++   + +      + +K       C    ++++  R+G++++A    + + FE + 
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSC----MVNLLGRAGKLQEAYDLIKEMPFEPDS 557

Query: 455 VSYNTMVDAYAKNLN---SEKAFELLHEIEDTGVGT 487
             +  ++++     N   +E A E L  +E    GT
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593



 Score =  170 bits (430), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 133/530 (25%), Positives = 242/530 (45%), Gaps = 96/530 (18%)

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           H+ + +S  + +  I   LI+ YS     N+A+ + +S+ +   I S+SS+I +      
Sbjct: 38  HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDP-TIYSFSSLIYALTKAKL 96

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
              +I +F  M   G  P+ +    + + C+      +G  I+             CV C
Sbjct: 97  FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH-------------CVSC 143

Query: 221 AL---IDMFVKGSV--------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
                +D FV+GS+         +  A KVFD+M++K+ V  + ++    + GC  + +R
Sbjct: 144 VSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVR 203

Query: 270 LFLDM--------------ILS---------------------GFLPDRFTLSGVVSACS 294
           +  +M              ILS                     GF PD+ T+S V+ +  
Sbjct: 204 ILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVG 263

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK---------------------CTV 333
           + E+   G+ +H + I+ GL  D CV  +++DMY K                     C  
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323

Query: 334 -------DGSVDDSRKVF----DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
                  +G VD + ++F    ++ ++ NV+SWT+II G  Q+ G+D EA++LF +M   
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN-GKDIEALELFREMQVA 382

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMED 441
            V PNH T  S+L ACGN+         +  AV R   LD+  VG++LI MYA+ GR+  
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINL 441

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           ++  F  +  KNLV +N++++ ++ +  +++   +   +  T +     +F SLLS    
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501

Query: 502 IGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           +G   +G +    + +  G +     Y+ ++++  R   ++ A+ + KEM
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 104/448 (23%), Positives = 196/448 (43%), Gaps = 88/448 (19%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q H+  +++G   D  +   L+  Y+        +D+  V   + D  + S++++I    
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNC---FNDADLVLQSIPDPTIYSFSSLIYALT 92

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           ++     +++ +FS M    + P+     ++ K C  L    V +Q++  +   G  +D 
Sbjct: 93  KAK-LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V  S+  MY R GRM DARK F+ + +K++V+ + ++ AYA+    E+   +L E+E +
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211

Query: 484 GVGTSAYTFASLLSG-----------------------------ASSIGAIGKGEQ---- 510
           G+  +  ++  +LSG                             +S + ++G  E     
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271

Query: 511 --IHARIIKSGFESNHCIYNALISMYSRCANV-------------EAA------------ 543
             IH  +IK G   + C+ +A+I MY +  +V             EA             
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331

Query: 544 ---------FQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
                    F++FKE   + NV+SWTS+I G A++G    ALE+F +M   G+KPN +T 
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY------ACMVDLLGRSGSLTEALE 647
            ++L AC +   +  G    RS    HG   R+         + ++D+  + G +  +  
Sbjct: 392 PSMLPACGNIAALGHG----RS---THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTE 675
               MP + +++ W + +    +HG  +
Sbjct: 445 VFNMMP-TKNLVCWNSLMNGFSMHGKAK 471



 Score = 46.2 bits (108), Expect = 0.082,   Method: Compositional matrix adjust.
 Identities = 26/95 (27%), Positives = 47/95 (49%)

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           K  Q HARI+KSG +++  I   LI+ YS       A  V + + D  + S++S+I    
Sbjct: 33  KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           K     +++ +F +M + G+ P+      +   C+
Sbjct: 93  KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA 127


>gi|6714305|gb|AAF26001.1|AC013354_20 F15H18.4 [Arabidopsis thaliana]
          Length = 1702

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 261/799 (32%), Positives = 435/799 (54%), Gaps = 20/799 (2%)

Query: 63   IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
            I T DL+      PD  TY  ++K+C    +  +G  VH L+ ++ L  +  + N+L+S 
Sbjct: 533  ISTTDLL------PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 586

Query: 123  YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----GFCP 178
            Y   G + +A ++F  M  +R++VSW+SMI  + + G   ++  +  EM+E      F P
Sbjct: 587  YGTHGFVTDALQLFDIM-PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 645

Query: 179  NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
            +      V+  C+    + +G  ++G+ +K    D ++ +  AL+DM+ K    + +A  
Sbjct: 646  DVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGC-ITNAQM 703

Query: 239  VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSEL 296
            +F     KN V W  M+   +  G       +   M+  G     D  T+   V  C   
Sbjct: 704  IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 763

Query: 297  ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                S K+LH ++++     +  V  + V  YAKC   GS+  +++VF  +    V SW 
Sbjct: 764  SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC---GSLSYAQRVFHGIRSKTVNSWN 820

Query: 357  AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            A+I G+ QS    + ++     M    + P+ FT  S+L AC  L    + ++V+   ++
Sbjct: 821  ALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 879

Query: 417  RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                 D  V  S++S+Y   G +   +  F+++ +K+LVS+NT++  Y +N   ++A  +
Sbjct: 880  NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 939

Query: 477  LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
              ++   G+     +   +    S + ++  G + HA  +K   E +  I  +LI MY++
Sbjct: 940  FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 999

Query: 537  CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
              ++  + +VF  +++++  SW +MI G+  HG A  A+++F +M   G  P+ +T++ V
Sbjct: 1000 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 1059

Query: 597  LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI-RSMPLS 655
            L+AC+H+GLI EG ++   M    G+   ++HYAC++D+LGR+G L +AL  +   M   
Sbjct: 1060 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 1119

Query: 656  ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            ADV +W++ L +CR+H + E+G+  A  + E +P+ P  ++LLSNLYA  G WE V  +R
Sbjct: 1120 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 1179

Query: 716  KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
            +RM E +L K+AGCSWIE + KV  F VGE       EI +    L +KI + GY PDT 
Sbjct: 1180 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 1239

Query: 776  FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
             V H+L EE+K++ L  HSEK+A+ +GLI TS+   IRV+KNLR+C DCH A K IS V 
Sbjct: 1240 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 1299

Query: 836  GREIVLRDSNRFHHIKDGK 854
             REIV+RD+ RFHH K+G+
Sbjct: 1300 EREIVVRDNKRFHHFKNGE 1318



 Score =  244 bits (622), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 152/617 (24%), Positives = 322/617 (52%), Gaps = 22/617 (3%)

Query: 79   DTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVILNSLISLYSKCGDLNEANKIFK 137
            +   LLL++  + ++  +G+ +H L++ S +L  + V+   +I++Y+ CG  +++  +F 
Sbjct: 440  EALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 499

Query: 138  SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENV 196
            ++ +K ++  W+++ISSY       + +  F+EM+      P+ + +  VI+AC+   +V
Sbjct: 500  ALRSK-NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 558

Query: 197  AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             IG  ++G ++K G  + DV VG AL+  +      +  A ++FD M E+N V W  MI 
Sbjct: 559  GIGLAVHGLVVKTGLVE-DVFVGNALVSFYGTHGF-VTDALQLFDIMPERNLVSWNSMIR 616

Query: 257  RCTQLGCPRDAIRLFLDMIL----SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
              +  G   ++  L  +M+       F+PD  TL  V+  C+       GK +H WA++ 
Sbjct: 617  VFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVKL 676

Query: 313  GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
             L  ++ +  +L+DMY+KC   G + +++ +F    + NV+SW  ++ G+  + G     
Sbjct: 677  RLDKELVLNNALMDMYSKC---GCITNAQMIFKMNNNKNVVSWNTMVGGF-SAEGDTHGT 732

Query: 373  VKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
              +   M+ G   V  +  T  + +  C +       ++++ +++K+    ++ V N+ +
Sbjct: 733  FDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAFV 792

Query: 431  SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            + YA+ G +  A++ F  +  K + S+N ++  +A++ +   + +   +++ +G+   ++
Sbjct: 793  ASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDSF 852

Query: 491  TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            T  SLLS  S + ++  G+++H  II++  E +  +Y +++S+Y  C  +     +F  M
Sbjct: 853  TVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDAM 912

Query: 551  EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
            ED++++SW ++ITG+ ++GF  RAL +F +M+  GI+  GI+ + V  ACS    +  G 
Sbjct: 913  EDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLGR 972

Query: 611  KHFRSMYDEHGIVQRMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
            +     Y    +++     AC ++D+  ++GS+T++ +    +        W   +    
Sbjct: 973  EA--HAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGYG 1029

Query: 670  VHGDTELGKHAAEMILE 686
            +HG   L K A ++  E
Sbjct: 1030 IHG---LAKEAIKLFEE 1043



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 177/337 (52%), Gaps = 12/337 (3%)

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSW-AIRTGLALDVCVGCSLVDMYAKCTVDGS 336
            FL  R  L  ++ A  + +    G+++H   +  T L  D  +   ++ MYA C   GS
Sbjct: 434 AFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC---GS 490

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG-QVAPNHFTFASVL 395
            DDSR VFD +   N+  W A+I+ Y ++   D E ++ F +MI    + P+HFT+  V+
Sbjct: 491 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVI 549

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
           KAC  + D  +   V+   VK G   D  VGN+L+S Y   G + DA + F+ + E+NLV
Sbjct: 550 KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLV 609

Query: 456 SYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGT---SAYTFASLLSGASSIGAIGKGEQI 511
           S+N+M+  ++ N  SE++F LL E +E+ G G       T  ++L   +    IG G+ +
Sbjct: 610 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 669

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   +K   +    + NAL+ MYS+C  +  A  +FK   ++NV+SW +M+ GF+  G  
Sbjct: 670 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 729

Query: 572 ARALEIFYKMLADG--IKPNGITYIAVLSACSHAGLI 606
               ++  +MLA G  +K + +T +  +  C H   +
Sbjct: 730 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 766


>gi|357116509|ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/700 (34%), Positives = 382/700 (54%), Gaps = 71/700 (10%)

Query: 233 LESAYKVFDKM--TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS--GFLPDRFTLSG 288
           L  +   FD +    ++TV    MI+   +      A+ +F  ++ S     PD ++ + 
Sbjct: 105 LRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTS 164

Query: 289 VVSACSELE--LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ++SA  ++     +   QLH    + G    + V  +L+ +Y KC   G   D+RKV D 
Sbjct: 165 LLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDE 224

Query: 347 MLDHNVMSWTAIITGYVQSG------------------------------GRDKEAVKLF 376
           M + + ++WT I+ G+V+ G                              G   EA +LF
Sbjct: 225 MPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELF 284

Query: 377 SDMIQGQVAPNHFTFASVLKACGN----LLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
             M+  ++ P+ FTF S+L AC N    L   +V  Q               V N+L+++
Sbjct: 285 RRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVPEAALPVNNALVTL 344

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNT-------------------------------MV 461
           Y++SG++  A K F+S+  K++VS+NT                               MV
Sbjct: 345 YSKSGKIAVATKIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMV 404

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
             Y     +E A +L +++    V    YT+A  ++    +GA+  G+Q+HA +++ GFE
Sbjct: 405 SGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFE 464

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           +++   NAL++MY+RC  V+ A  VF  M + + +SW +MI+   +HG    ALE+F +M
Sbjct: 465 ASNSAGNALLTMYARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQM 524

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
           +A GI P+ I+++ +L+AC+HAGL+ +G+++F SM  + GI    +HYA ++DLLGR+G 
Sbjct: 525 VAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGR 584

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
           + EA + I++MP      +W   L  CR++GD ELG +AA+ + +  P+    +ILLSN 
Sbjct: 585 IGEARDLIKTMPFEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPEHDGTYILLSNT 644

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           Y++AG W   A +RK M++R + KE GCSWIE  NKVH F VG+T HP   E+Y  L+ +
Sbjct: 645 YSAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGNKVHVFLVGDTKHPDAHEVYRFLEMV 704

Query: 762 ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVC 821
             K+++ GY+PDT F L ++   +K   LF HSE++AV+FGL+       + V KNL++C
Sbjct: 705 GAKMRKLGYVPDTKFALQDMAPHEKEYVLFAHSERLAVSFGLLKLPAGATVTVLKNLKIC 764

Query: 822 GDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GDCHTA+ ++S   GREIV+RD  RFHH KDG+CSC +YW
Sbjct: 765 GDCHTAMMFMSRAVGREIVVRDVRRFHHFKDGECSCGNYW 804



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 154/597 (25%), Positives = 260/597 (43%), Gaps = 96/597 (16%)

Query: 92  RNFHLGKLVHSLLTRSKL---EPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVS 147
           R  HL  L   L T + L   +P  V   SL+S Y+  G L ++   F S+   +RD V 
Sbjct: 65  RLLHLYTLSPDLATPAVLFRADPGPVAATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVL 124

Query: 148 WSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
            ++MIS++        A+ +F  +L  +    P++Y F++++ A     ++A+ H     
Sbjct: 125 HNAMISAFARASLAAPAVSVFRSLLASDDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQ-- 182

Query: 206 LLKCGYFD----SDVCVGCALIDMFVKGSVD--LESAYKVFDKMTEKNTVGWTL------ 253
            L C        + + V  ALI +++K         A KV D+M EK+ + WT       
Sbjct: 183 -LHCAVHKLGAGAVLSVSNALIALYMKCDAPGVTRDARKVLDEMPEKDELTWTTIVVGHV 241

Query: 254 -------------------------MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
                                    MI+   Q G   +A  LF  M+     PD FT + 
Sbjct: 242 RKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCAEAFELFRRMVSKRIPPDEFTFTS 301

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALD------VCVGCSLVDMYAKCTVDGSVDDSRK 342
           ++SAC+    F  GK +H   IR  L  D      + V  +LV +Y+K    G +  + K
Sbjct: 302 LLSACANAGFFLHGKSVHGQFIR--LQPDFVPEAALPVNNALVTLYSK---SGKIAVATK 356

Query: 343 VFDRMLDHNVMSWTAIITGYVQS------------------------------GGRDKEA 372
           +FD M   +V+SW  I++GY++S                              GG  ++A
Sbjct: 357 IFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAEDA 416

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +KLF+ M    V P  +T+A  + ACG L      +Q++ H V+ G    +  GN+L++M
Sbjct: 417 LKLFNQMRSEDVKPCDYTYAGAVAACGELGALKHGKQLHAHLVQCGFEASNSAGNALLTM 476

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YAR G ++DAR  F  +   + VS+N M+ A  ++ +  +A EL  ++   G+     +F
Sbjct: 477 YARCGAVKDARLVFLVMPNVDSVSWNAMISALGQHGHGREALELFDQMVAQGIYPDRISF 536

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            ++L+  +  G +  G Q    + +  G       Y  LI +  R   +  A  + K M 
Sbjct: 537 LTILTACNHAGLVDDGFQYFESMERDFGISPGEDHYARLIDLLGRAGRIGEARDLIKTMP 596

Query: 552 -DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            +     W ++++G   +G     A A +  +KM+ +    +  TYI + +  S AG
Sbjct: 597 FEPTPAIWEAILSGCRINGDMELGAYAADQLFKMVPE----HDGTYILLSNTYSAAG 649



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 95/349 (27%), Positives = 157/349 (44%), Gaps = 49/349 (14%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G   +A      M  K   PD  T++ LL +C  +  F  GK VH    R  L+P+
Sbjct: 271 YVQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIR--LQPD 328

Query: 113 SV------ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS---------------- 150
            V      + N+L++LYSK G +  A KIF SM   +D+VSW++                
Sbjct: 329 FVPEAALPVNNALVTLYSKSGKIAVATKIFDSM-TLKDVVSWNTILSGYIESGCLDNAAR 387

Query: 151 ---------------MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
                          M+S YV+ G   DA+ +F +M      P +Y ++  + AC     
Sbjct: 388 IFKEMPYKSELSWMVMVSGYVHGGLAEDALKLFNQMRSEDVKPCDYTYAGAVAACGELGA 447

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  G  ++  L++CG F++    G AL+ M+ + G+V  + A  VF  M   ++V W  M
Sbjct: 448 LKHGKQLHAHLVQCG-FEASNSAGNALLTMYARCGAV--KDARLVFLVMPNVDSVSWNAM 504

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ-LHSWAIRTG 313
           I+   Q G  R+A+ LF  M+  G  PDR +   +++AC+   L   G Q   S     G
Sbjct: 505 ISALGQHGHGREALELFDQMVAQGIYPDRISFLTILTACNHAGLVDDGFQYFESMERDFG 564

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG 361
           ++        L+D+  +    G + ++R +   M  +     W AI++G
Sbjct: 565 ISPGEDHYARLIDLLGRA---GRIGEARDLIKTMPFEPTPAIWEAILSG 610



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 44/283 (15%)

Query: 426 GNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI--E 481
             SL+S YA +GR+ D+   F+S  +  ++ V +N M+ A+A+   +  A  +   +   
Sbjct: 92  ATSLVSAYAVAGRLRDSAAFFDSVPVARRDTVLHNAMISAFARASLAAPAVSVFRSLLAS 151

Query: 482 DTGVGTSAYTFASLLSGASSIG--AIGKGEQIHARIIKSGFESNHCIYNALISMYSRC-- 537
           D  +    Y+F SLLS    +   A+    Q+H  + K G  +   + NALI++Y +C  
Sbjct: 152 DDSLRPDDYSFTSLLSAVGQMHDLAVSHCTQLHCAVHKLGAGAVLSVSNALIALYMKCDA 211

Query: 538 --------------------------------ANVEAAFQVFKEMEDRNVISWTSMITGF 565
                                            +V AA   F+E++    + W +MI+G+
Sbjct: 212 PGVTRDARKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGY 271

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK---HFRSMYDEHGI 622
            + G  A A E+F +M++  I P+  T+ ++LSAC++AG    G      F  +  +   
Sbjct: 272 VQSGMCAEAFELFRRMVSKRIPPDEFTFTSLLSACANAGFFLHGKSVHGQFIRLQPDFVP 331

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
              +     +V L  +SG +  A +   SM L  DV+ W T L
Sbjct: 332 EAALPVNNALVTLYSKSGKIAVATKIFDSMTLK-DVVSWNTIL 373


>gi|302800064|ref|XP_002981790.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
 gi|300150622|gb|EFJ17272.1| hypothetical protein SELMODRAFT_444974 [Selaginella moellendorffii]
          Length = 611

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/608 (38%), Positives = 384/608 (63%), Gaps = 12/608 (1%)

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL--FTSGKQLHSWAIRTGLALDVC 319
           GC  +A+  F  M  SG  PDR T S +++A +++       G+++H +A  +GL  +V 
Sbjct: 8   GCHSEALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVV 67

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG +++ MY KC   G +DD+R  F+ +   N ++W A++T Y +  GRD+EA++LF +M
Sbjct: 68  VGTAVISMYGKC---GRLDDARAAFEELQWKNSVTWNAMMTNY-KLDGRDREALELFREM 123

Query: 380 IQGQVA--PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL--DDCVGNSLISMYAR 435
            +   +  P+ F+F+  ++AC NL D     +++    + G+ L  D  VG +L++MY++
Sbjct: 124 CERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSK 183

Query: 436 SGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT-GVGTSAYTFA 493
            G +E+ARK F+S+  + + V +N M+ AYA++   ++A +L   + DT  +     TF 
Sbjct: 184 CGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFV 243

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           +++   + + A+ +G  IHAR+  + F++N  + NAL+ MY +C  ++ A  VF  M+ +
Sbjct: 244 TVIDVCAELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKCGCLDEALDVFHSMKLK 303

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           + ISW ++I+ +A HG + +AL ++ +M   G+KP  +T++ +LSACSH GL+++G  +F
Sbjct: 304 DEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLDYF 363

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M D+H I   + H+ C++DLLGR G L EA   ++SMP+ A+ + W + LGAC+ HGD
Sbjct: 364 YRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGACKTHGD 423

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            + G  AA+ ++++ P     ++LLSN+YA+AG W+ V  IRK M  R + K  G SWIE
Sbjct: 424 LKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEKIRKIMAARGVKKSPGKSWIE 483

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
             + VH+F  G+ SHP+  EIY EL ++  ++K  GY+PDT+ V H+LEEE+K   L  H
Sbjct: 484 IGDVVHEFVSGDRSHPQGEEIYVELGKMVEEMKGLGYVPDTSSVFHDLEEEEKEDLLVCH 543

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+ +G +       +R+ KNLRVC DCHTA K++S +TGR+IV+RD+ RFH  ++G
Sbjct: 544 SEKLAIVYGNMVVPGKSMLRIVKNLRVCLDCHTATKFMSRITGRKIVVRDAARFHLFENG 603

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 604 SCSCRDYW 611



 Score =  169 bits (429), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 210/415 (50%), Gaps = 21/415 (5%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL--GKLVHSLLTRSKLEPNSVILNS 118
           +A+     M Q G  PD  T+S++L +  +     +  G+ +H     S L PN V+  +
Sbjct: 12  EALVFFRRMYQSGERPDRVTFSVILAAIAQMGAAAIDQGREIHRYARISGLLPNVVVGTA 71

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC- 177
           +IS+Y KCG L++A   F+ +  K + V+W++M+++Y   G+  +A+ +F EM E     
Sbjct: 72  VISMYGKCGRLDDARAAFEELQWK-NSVTWNAMMTNYKLDGRDREALELFREMCERSRSA 130

Query: 178 -PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLES 235
            P+++ FS  I ACSN E++  G  I+  L + G     DV VG AL++M+ K   DLE 
Sbjct: 131 RPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHKDVVVGTALLNMYSKCG-DLEE 189

Query: 236 AYKVFDKMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSAC 293
           A KVFD +  + ++V W  MI    Q G  + A+ L+  M   +   P + T   V+  C
Sbjct: 190 ARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSMHDTTDLAPKQGTFVTVIDVC 249

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +EL     G+ +H+    T    ++ V  +LV MY KC   G +D++  VF  M   + +
Sbjct: 250 AELSALKQGRAIHARVRATNFDANLLVSNALVHMYGKC---GCLDEALDVFHSMKLKDEI 306

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVY 411
           SW  II+ Y   G  D +A+ L+ +M    V P   TF  +L AC  G L+   +    Y
Sbjct: 307 SWNTIISSYAYHGHSD-QALLLYQEMDLQGVKPTEVTFVGLLSACSHGGLVADGLD---Y 362

Query: 412 THAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            + ++    +   V +   +I +  R GR+ +A    +S+  + N V + +++ A
Sbjct: 363 FYRMQDDHRIKPSVPHFGCIIDLLGRGGRLAEAELVLKSMPIQANAVQWMSLLGA 417



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 107/404 (26%), Positives = 178/404 (44%), Gaps = 65/404 (16%)

Query: 56  DGRVQKAIFTLDLMTQKGN--HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS--KLEP 111
           DGR ++A+     M ++     PD  ++S+ +++C    +   G+ +H +L R   +L  
Sbjct: 110 DGRDREALELFREMCERSRSARPDKFSFSIAIEACSNLEDLEQGREIHEMLRREGKELHK 169

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           + V+  +L+++YSKCGDL EA K+F S+ +  D V W++MI++Y   G+   A+ ++  M
Sbjct: 170 DVVVGTALLNMYSKCGDLEEARKVFDSIRHDADSVCWNAMIAAYAQHGRGKQALDLYRSM 229

Query: 172 LE-LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            +     P +  F  VI  C+    +  G  I+   ++   FD+++ V  AL+ M+ K  
Sbjct: 230 HDTTDLAPKQGTFVTVIDVCAELSALKQGRAIHA-RVRATNFDANLLVSNALVHMYGKCG 288

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             L+ A  VF  M  K+ + W  +I+     G    A+ L+ +M L G  P   T  G++
Sbjct: 289 C-LDEALDVFHSMKLKDEISWNTIISSYAYHGHSDQALLLYQEMDLQGVKPTEVTFVGLL 347

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SACS   L   G                      +D + +   D  +  S   F  ++D 
Sbjct: 348 SACSHGGLVADG----------------------LDYFYRMQDDHRIKPSVPHFGCIID- 384

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
                       +  GGR  EA  +   M    +  N   + S+L AC    D       
Sbjct: 385 -----------LLGRGGRLAEAELVLKSM---PIQANAVQWMSLLGACKTHGD------- 423

Query: 411 YTHAVKRG-RALDDCV--------GNSLIS-MYARSGRMEDARK 444
               +KRG RA D  V        G  L+S +YA +GR +D  K
Sbjct: 424 ----LKRGVRAADQVVDRVPWTSGGYVLLSNIYAAAGRWKDVEK 463


>gi|356511287|ref|XP_003524358.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 674

 Score =  459 bits (1182), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 235/636 (36%), Positives = 374/636 (58%), Gaps = 22/636 (3%)

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           +++ W  +I      G  R ++  F  +   G  PDR     ++ A +  + F   + LH
Sbjct: 40  HSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLH 99

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGS-------------------VDDSRKVFDRM 347
           +  IR G   D+    +L++MY+K     S                   +D  RK+FDRM
Sbjct: 100 AAVIRLGFHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRM 159

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              +V+SW  +I G  Q+G  + EA+ +  +M +  + P+ FT +S+L       +    
Sbjct: 160 PVRDVVSWNTVIAGNAQNGMYE-EALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKG 218

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           ++++ +A++ G   D  +G+SLI MYA+  ++E +  AF  L  ++ +S+N+++    +N
Sbjct: 219 KEIHGYAIRHGFDKDVFIGSSLIDMYAKCTQVELSVCAFHLLSNRDAISWNSIIAGCVQN 278

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              ++       +    V     +F+S++   + + A+  G+Q+HA II+ GF+ N  I 
Sbjct: 279 GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIA 338

Query: 528 NALISMYSRCANVEAAFQVFKEME--DRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           ++L+ MY++C N++ A  +F ++E  DR+++SWT++I G A HG A  A+ +F +ML DG
Sbjct: 339 SSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDG 398

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +KP  + ++AVL+ACSHAGL+ EGWK+F SM  + G+   +EHYA + DLLGR+G L EA
Sbjct: 399 VKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEA 458

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
            +FI +M       VW T L ACR H + EL +     IL  DP +  AH+++SN+Y++A
Sbjct: 459 YDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKILLVDPGNMGAHVIMSNIYSAA 518

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
             W   A +R RM++  L K   CSWIE  NKVH F  G+ SHP   +I   L+ L  ++
Sbjct: 519 QRWRDAAKLRVRMRKTGLKKTPACSWIEVGNKVHTFLAGDKSHPYYDKINEALNILLEQM 578

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           ++ GY+ DTN VLH+++EE K   L  HSE++A+AFG+IST+    IRV KN+RVC DCH
Sbjct: 579 EKEGYVLDTNEVLHDVDEEHKRDLLRTHSERLAIAFGIISTTSGTTIRVIKNIRVCVDCH 638

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           TAIK+++ + GREI++RD++RFHH K+G CSC DYW
Sbjct: 639 TAIKFMAKIVGREIIVRDNSRFHHFKNGSCSCGDYW 674



 Score =  172 bits (435), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 229/478 (47%), Gaps = 38/478 (7%)

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           +I K+       ++W  +I  Y + G    ++  F  +   G  P+ + F +++RA +  
Sbjct: 30  QIVKTTKATPHSLAWICIIKCYASHGLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLF 89

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK---------------------GSVD 232
           ++  +   ++  +++ G F  D+    AL++M+ K                      SV 
Sbjct: 90  KHFNLAQSLHAAVIRLG-FHFDLYTANALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVK 148

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++S  K+FD+M  ++ V W  +I    Q G   +A+ +  +M      PD FTLS ++  
Sbjct: 149 IDSVRKLFDRMPVRDVVSWNTVIAGNAQNGMYEEALNMVKEMGKENLRPDSFTLSSILPI 208

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            +E    T GK++H +AIR G   DV +G SL+DMYAKCT    V+ S   F  + + + 
Sbjct: 209 FTEHANVTKGKEIHGYAIRHGFDKDVFIGSSLIDMYAKCT---QVELSVCAFHLLSNRDA 265

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW +II G VQ+ GR  + +  F  M++ +V P   +F+SV+ AC +L   N+ +Q++ 
Sbjct: 266 ISWNSIIAGCVQN-GRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHA 324

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE--SLFEKNLVSYNTMVDAYAKNLNS 470
           + ++ G   +  + +SL+ MYA+ G ++ AR  F    + ++++VS+  ++   A + ++
Sbjct: 325 YIIRLGFDDNKFIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHA 384

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHC 525
             A  L  E+   GV      F ++L+  S  G + +G +    +     +  G E    
Sbjct: 385 LDAVSLFEEMLVDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQRDFGVAPGLEH--- 441

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKML 582
            Y A+  +  R   +E A+     M +    S W++++     H     A ++  K+L
Sbjct: 442 -YAAVADLLGRAGRLEEAYDFISNMGEEPTGSVWSTLLAACRAHKNIELAEKVVNKIL 498



 Score =  166 bits (420), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 231/452 (51%), Gaps = 37/452 (8%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G ++ ++ + +L+   G  PD   +  LL++    ++F+L + +H+ + R     +    
Sbjct: 55  GLLRHSLASFNLLRSFGISPDRHLFPSLLRASTLFKHFNLAQSLHAAVIRLGFHFDLYTA 114

Query: 117 NSLISLYSK----CGDLNEANKIFKSMGNK-----------------RDIVSWSSMISSY 155
           N+L+++YSK       L+E  +   +  NK                 RD+VSW+++I+  
Sbjct: 115 NALMNMYSKFHPHLSPLHEFPQARHNHNNKYSVKIDSVRKLFDRMPVRDVVSWNTVIAGN 174

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
              G   +A++M  EM +    P+ +  S+++   +   NV  G  I+G+ ++ G FD D
Sbjct: 175 AQNGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHG-FDKD 233

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           V +G +LIDM+ K +  +E +   F  ++ ++ + W  +I  C Q G     +  F  M+
Sbjct: 234 VFIGSSLIDMYAKCT-QVELSVCAFHLLSNRDAISWNSIIAGCVQNGRFDQGLGFFRRML 292

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
                P + + S V+ AC+ L     GKQLH++ IR G   +  +  SL+DMYAKC   G
Sbjct: 293 KEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNKFIASSLLDMYAKC---G 349

Query: 336 SVDDSRKVFDR--MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
           ++  +R +F++  M D +++SWTAII G     G   +AV LF +M+   V P +  F +
Sbjct: 350 NIKMARYIFNKIEMCDRDMVSWTAIIMGCAMH-GHALDAVSLFEEMLVDGVKPCYVAFMA 408

Query: 394 VLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL 449
           VL AC +  L+D       Y ++++R   +   + +  ++  +  R+GR+E+A     ++
Sbjct: 409 VLTACSHAGLVDEGWK---YFNSMQRDFGVAPGLEHYAAVADLLGRAGRLEEAYDFISNM 465

Query: 450 FEKNLVS-YNTMVDAYAKNLNSEKAFELLHEI 480
            E+   S ++T++ A   + N E A +++++I
Sbjct: 466 GEEPTGSVWSTLLAACRAHKNIELAEKVVNKI 497



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/249 (28%), Positives = 127/249 (51%), Gaps = 5/249 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++A+  +  M ++   PD  T S +L       N   GK +H    R   + +  I
Sbjct: 177 NGMYEEALNMVKEMGKENLRPDSFTLSSILPIFTEHANVTKGKEIHGYAIRHGFDKDVFI 236

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            +SLI +Y+KC  +  +   F  + N RD +SW+S+I+  V  G+    +  F  ML+  
Sbjct: 237 GSSLIDMYAKCTQVELSVCAFHLLSN-RDAISWNSIIAGCVQNGRFDQGLGFFRRMLKEK 295

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P +  FS+VI AC++   + +G  ++ ++++ G FD +  +  +L+DM+ K   +++ 
Sbjct: 296 VKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLG-FDDNKFIASSLLDMYAKCG-NIKM 353

Query: 236 AYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           A  +F+K  M +++ V WT +I  C   G   DA+ LF +M++ G  P       V++AC
Sbjct: 354 ARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEMLVDGVKPCYVAFMAVLTAC 413

Query: 294 SELELFTSG 302
           S   L   G
Sbjct: 414 SHAGLVDEG 422



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 101/211 (47%), Gaps = 11/211 (5%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR  + +     M ++   P   ++S ++ +C      +LGK +H+ + R   + N 
Sbjct: 276 VQNGRFDQGLGFFRRMLKEKVKPMQVSFSSVIPACAHLTALNLGKQLHAYIIRLGFDDNK 335

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            I +SL+ +Y+KCG++  A  IF  +    RD+VSW+++I      G  +DA+ +F EML
Sbjct: 336 FIASSLLDMYAKCGNIKMARYIFNKIEMCDRDMVSWTAIIMGCAMHGHALDAVSLFEEML 395

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG----CALIDMFVK 228
             G  P    F AV+ ACS+   V  G   +  + +    D  V  G     A+ D+  +
Sbjct: 396 VDGVKPCYVAFMAVLTACSHAGLVDEGWKYFNSMQR----DFGVAPGLEHYAAVADLLGR 451

Query: 229 GSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
               LE AY     M E+ T   W+ ++  C
Sbjct: 452 AG-RLEEAYDFISNMGEEPTGSVWSTLLAAC 481


>gi|218187045|gb|EEC69472.1| hypothetical protein OsI_38669 [Oryza sativa Indica Group]
          Length = 1084

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/768 (32%), Positives = 431/768 (56%), Gaps = 31/768 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G  ++A++    M + G  P     S +L SC ++  F  G+ VH+   +      
Sbjct: 118 YAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSE 177

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + + N+LI+LY +CG    A ++F  M + RD V+++++IS +        A+ +F EM 
Sbjct: 178 TFVGNALITLYLRCGSFRLAERVFYDMPH-RDTVTFNTLISGHAQCAHGEHALEIFEEMQ 236

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+    S+++ AC++  ++  G  ++ +L K G   SD  +  +L+D++VK   D
Sbjct: 237 SSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAG-MSSDYIMEGSLLDLYVKCG-D 294

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E+A  +F+     N V W L++    Q+     +  LF  M  +G  P++FT   ++  
Sbjct: 295 VETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQTAGIRPNQFTYPCILRT 354

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+       G+Q+HS +++TG   D+ V   L+DMY+K    G ++ +R+V + + + +V
Sbjct: 355 CTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKY---GWLEKARRVLEMLKEKDV 411

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT++I GYVQ     K+A+  F +M +  + P++   AS +  C  +       Q++ 
Sbjct: 412 VSWTSMIAGYVQHE-YCKDALAAFKEMQKCGIWPDNIGLASAISGCAGIKAMRQGLQIHA 470

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                G + D  + N+L+++YAR GR+ +A  +FE +  K+ +++N +V  +A++   E+
Sbjct: 471 RVYVSGYSGDVSIWNALVNLYARCGRIREAFSSFEEIEHKDEITWNGLVSGFAQSGLHEE 530

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++   ++ +GV  + +TF S LS ++++  I +G+QIHAR+IK+G      + NALIS
Sbjct: 531 ALKVFMRMDQSGVKHNVFTFVSALSASANLAEIKQGKQIHARVIKTGHSFETEVGNALIS 590

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y +C + E A   F EM +RN +SW ++IT  ++HG    AL+ F     D +K  G++
Sbjct: 591 LYGKCGSFEDAKMEFSEMSERNEVSWNTIITSCSQHGRGLEALDFF-----DQMKKEGLS 645

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           Y                   F+SM D++GI  R +HYAC++D+ GR+G L  A +F+  M
Sbjct: 646 Y-------------------FKSMSDKYGIRPRPDHYACVIDIFGRAGQLDRAKKFVEEM 686

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P++AD +VWRT L AC+VH + E+G+ AA+ +LE +P D A+++LLSN YA  G W    
Sbjct: 687 PIAADAMVWRTLLSACKVHKNIEVGELAAKHLLELEPHDSASYVLLSNAYAVTGKWANRD 746

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +RK M++R + KE G SWIE  N VH F VG+  HP   +IY  L  +  ++ + GY  
Sbjct: 747 QVRKMMRDRGVRKEPGRSWIEVKNVVHAFFVGDRLHPLAEQIYNFLAVINDRVAKVGYKQ 806

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +   + H+ E+E +      HSEK+AV FGL+S     P+RV KNLRV
Sbjct: 807 EKYHLFHDKEQEGRDPTDLVHSEKLAVTFGLMSLPPCMPLRVIKNLRV 854



 Score =  219 bits (559), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 248/465 (53%), Gaps = 8/465 (1%)

Query: 183 FSAVIRAC-SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
           F+  +RAC  N     +   I+   +  G    D  VG  LID++ K  + L  A +VF+
Sbjct: 44  FACALRACRGNGRRWQVVPEIHAKAITRG-LGKDRIVGNLLIDLYSKNGLVL-PARRVFE 101

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           +++ ++ V W  M++   Q G   +A+ L+  M  +G +P  + LS V+S+C++ ELF  
Sbjct: 102 ELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTPYVLSSVLSSCTKAELFAQ 161

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+ +H+   + G   +  VG +L+ +Y +C   GS   + +VF  M   + +++  +I+G
Sbjct: 162 GRSVHAQGYKQGFCSETFVGNALITLYLRC---GSFRLAERVFYDMPHRDTVTFNTLISG 218

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q     + A+++F +M    ++P+  T +S+L AC +L D     Q++++  K G + 
Sbjct: 219 HAQC-AHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKGTQLHSYLFKAGMSS 277

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  +  SL+ +Y + G +E A   F      N+V +N ++ A+ +  +  K+FEL  +++
Sbjct: 278 DYIMEGSLLDLYVKCGDVETALVIFNLGNRTNVVLWNLILVAFGQINDLAKSFELFCQMQ 337

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             G+  + +T+  +L   +  G I  GEQIH+  +K+GFES+  +   LI MYS+   +E
Sbjct: 338 TAGIRPNQFTYPCILRTCTCTGEIDLGEQIHSLSVKTGFESDMYVSGVLIDMYSKYGWLE 397

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +V + +++++V+SWTSMI G+ +H +   AL  F +M   GI P+ I   + +S C+
Sbjct: 398 KARRVLEMLKEKDVVSWTSMIAGYVQHEYCKDALAAFKEMQKCGIWPDNIGLASAISGCA 457

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
               + +G +    +Y   G    +  +  +V+L  R G + EA 
Sbjct: 458 GIKAMRQGLQIHARVYVS-GYSGDVSIWNALVNLYARCGRIREAF 501



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 90/298 (30%), Positives = 156/298 (52%), Gaps = 3/298 (1%)

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKAC-GNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           + + LF+D  +         FA  L+AC GN     V  +++  A+ RG   D  VGN L
Sbjct: 24  KVLSLFADKARQHGGLGPLDFACALRACRGNGRRWQVVPEIHAKAITRGLGKDRIVGNLL 83

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I +Y+++G +  AR+ FE L  ++ VS+  M+  YA+N   E+A  L  ++   GV  + 
Sbjct: 84  IDLYSKNGLVLPARRVFEELSARDNVSWVAMLSGYAQNGLGEEALWLYRQMHRAGVVPTP 143

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           Y  +S+LS  +      +G  +HA+  K GF S   + NALI++Y RC +   A +VF +
Sbjct: 144 YVLSSVLSSCTKAELFAQGRSVHAQGYKQGFCSETFVGNALITLYLRCGSFRLAERVFYD 203

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  R+ +++ ++I+G A+      ALEIF +M + G+ P+ +T  ++L+AC+  G + +G
Sbjct: 204 MPHRDTVTFNTLISGHAQCAHGEHALEIFEEMQSSGLSPDCVTISSLLAACASLGDLQKG 263

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
                S   + G+         ++DL  + G +  AL  I ++    +V++W   L A
Sbjct: 264 -TQLHSYLFKAGMSSDYIMEGSLLDLYVKCGDVETAL-VIFNLGNRTNVVLWNLILVA 319


>gi|413918675|gb|AFW58607.1| hypothetical protein ZEAMMB73_481408 [Zea mays]
          Length = 694

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 231/602 (38%), Positives = 361/602 (59%), Gaps = 6/602 (0%)

Query: 262 GCPRDAIRLFLDMI--LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           G P DA+ LF++M+   S    D+ T +  + +CS +     G+ + ++A++ GL  D  
Sbjct: 97  GHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALDVGRGVQAYAVKRGLVADRF 156

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  SL+ MYA C   G V  +R VFD   +  V+ W AI+  Y+++G    E V++F  M
Sbjct: 157 VLSSLIHMYASC---GDVAAARLVFDAAEESGVVMWNAIVAAYLKNGDW-MEVVEMFKGM 212

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           ++  VA +  T  SV+ ACG + D+ + + V  H  + G A +  +  +L+ MYA+ G +
Sbjct: 213 LEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNPKLVTALMDMYAKCGEI 272

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
             AR+ F+ +  +++V+++ M+  Y +     +A  L  E++   V  +  T  S+LS  
Sbjct: 273 GKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQLARVEPNDVTMVSVLSAC 332

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           + +GA+  G+ +H+ + +        +  AL+  Y++C  ++ A + F+ M  +N  +WT
Sbjct: 333 AVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKCGCIDDAVEAFESMPVKNSWTWT 392

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           ++I G A +G    ALE+F  M   GI+P  +T+I VL ACSH+ L+ EG +HF SM  +
Sbjct: 393 ALIKGMATNGRGREALELFSSMREAGIEPTDVTFIGVLMACSHSCLVEEGRRHFDSMARD 452

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           +GI  R+EHY CMVDLLGR+G + EA +FIR+MP+  + ++WR  L +C VH +  +G+ 
Sbjct: 453 YGIKPRVEHYGCMVDLLGRAGLVDEAYQFIRTMPIEPNAVIWRALLSSCAVHRNVGIGEE 512

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           A + I+  +P     ++LLSN+YASAG W+  A +RK MK+R + K  GCS IE D  V 
Sbjct: 513 ALKQIISLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGIEKTPGCSLIELDGVVF 572

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F   ++ HP+  EIY +++++  +IK  GY+P+T  V  E+EE +K   +  HSEK+A+
Sbjct: 573 EFFAEDSDHPELREIYQKVEEMIGRIKVAGYVPNTADVRLEVEEREKEVSVSHHSEKLAI 632

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGL+       IR+ KNLRVC DCH+A K IS V  REIV+RD N FHH KDG CSCND
Sbjct: 633 AFGLMKLDPGATIRLSKNLRVCADCHSATKLISKVYDREIVVRDRNIFHHFKDGTCSCND 692

Query: 860 YW 861
           YW
Sbjct: 693 YW 694



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 255/525 (48%), Gaps = 54/525 (10%)

Query: 39  QPTTSEPLSNRLIY-HLNDGRVQKAI--FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           +P  S P  N L+   L+ G  + A+  F   L        D  T +  LKSC R     
Sbjct: 78  RPPLSTPCYNVLMRAFLHAGHPEDALHLFIEMLHAASACPADQHTAACALKSCSRMCALD 137

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           +G+ V +   +  L  +  +L+SLI +Y+ CGD+  A  +F +   +  +V W++++++Y
Sbjct: 138 VGRGVQAYAVKRGLVADRFVLSSLIHMYASCGDVAAARLVFDA-AEESGVVMWNAIVAAY 196

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           +  G  ++ + MF  MLE+G   +E    +V+ AC    +  +G  + G + + G   + 
Sbjct: 197 LKNGDWMEVVEMFKGMLEVGVAFDEVTLVSVVTACGRIGDAKLGKWVAGHVDEEGLARNP 256

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
             V  AL+DM+ K   ++  A ++FD M  ++ V W+ MI+  TQ    R+A+ LF +M 
Sbjct: 257 KLV-TALMDMYAKCG-EIGKARRLFDGMQSRDVVAWSAMISGYTQADQCREALGLFSEMQ 314

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
           L+   P+  T+  V+SAC+ L    +GK +HS+  R  L+L   +G +LVD YAKC   G
Sbjct: 315 LARVEPNDVTMVSVLSACAVLGALETGKWVHSYVRRKRLSLTTILGTALVDFYAKC---G 371

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            +DD+ + F+ M   N  +WTA+I G + + GR +EA++LFS M +  + P   TF  VL
Sbjct: 372 CIDDAVEAFESMPVKNSWTWTALIKG-MATNGRGREALELFSSMREAGIEPTDVTFIGVL 430

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----F 450
            AC +                                   S  +E+ R+ F+S+      
Sbjct: 431 MACSH-----------------------------------SCLVEEGRRHFDSMARDYGI 455

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           +  +  Y  MVD   +    ++A++ +  +    +  +A  + +LLS  +    +G GE+
Sbjct: 456 KPRVEHYGCMVDLLGRAGLVDEAYQFIRTMP---IEPNAVIWRALLSSCAVHRNVGIGEE 512

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
              +II S   S+   Y  L ++Y+     + A  V KEM+DR +
Sbjct: 513 ALKQII-SLNPSHSGDYVLLSNIYASAGQWKDAAMVRKEMKDRGI 556


>gi|449438512|ref|XP_004137032.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
 gi|449526872|ref|XP_004170437.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Cucumis sativus]
          Length = 667

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/627 (37%), Positives = 372/627 (59%), Gaps = 29/627 (4%)

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           C    I+   D   S    D    S ++ +C +L     GKQ+HS  I +G + D  +  
Sbjct: 42  CNDGRIKQAYDTFTSEIWSDPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISN 101

Query: 323 SLVDMYAKC----------------------------TVDGSVDDSRKVFDRMLDHNVMS 354
            L++ Y+K                                G ++ ++K+FD M + N+ +
Sbjct: 102 HLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEMSERNIAT 161

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A+I G  Q    +K+A+ LF +M      P+ FT  SVL+ C  L      ++V+   
Sbjct: 162 WNAMIAGLTQFE-FNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACL 220

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K G  L   VG+SL  MY +SG + D  K  +S+  + +V++NT++   A+N   E+  
Sbjct: 221 LKCGFELSSVVGSSLAHMYIKSGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPEEVL 280

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
              + ++  G      TF S+LS  S +  +G+G+QIHA +IK+G  S   + ++LISMY
Sbjct: 281 NQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMY 340

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           SR   +E + + F + E+ +V+ W+SMI  +  HG    ALE+F++M    ++ N +T++
Sbjct: 341 SRSGCLEDSIKAFVDRENFDVVLWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFL 400

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L ACSH+GL  +G ++F  M  ++ +  R+EHY C+VDLLGR+G L EA   IRSMP+
Sbjct: 401 SLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPV 460

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D ++W+T L AC++H + E+ +  +E I++ DP D A+++LLSN++ASA +W  V+ I
Sbjct: 461 QPDGIIWKTLLAACKLHKEAEMAERISEEIIKLDPLDAASYVLLSNIHASARNWLNVSQI 520

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           RK M++R++ KE G SW+E  N VH+F +G+ SHP+  EI   L +L  ++K+ GY+P+ 
Sbjct: 521 RKAMRDRSVRKEPGISWLELKNLVHQFSMGDKSHPQYFEIDLYLKELMSELKQHGYVPEL 580

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
             VLH+++ E+K   L  HSEK A+AF L++TS++ PIRV KNLRVC DCH AIK IS +
Sbjct: 581 GSVLHDMDNEEKEYNLAHHSEKFAIAFALMNTSENVPIRVMKNLRVCDDCHNAIKCISRI 640

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             REI++RD++RFHH KDG+CSC +YW
Sbjct: 641 RNREIIVRDASRFHHFKDGECSCGNYW 667



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 137/465 (29%), Positives = 227/465 (48%), Gaps = 56/465 (12%)

Query: 55  NDGRVQKA--IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           NDGR+++A   FT ++ +      D   +S LL+SCI+  +   GK VHSL+  S    +
Sbjct: 43  NDGRIKQAYDTFTSEIWS------DPSLFSHLLQSCIKLGSLFGGKQVHSLIITSGGSKD 96

Query: 113 SVILNSLISLYSKCG-------------------------------DLNEANKIFKSMGN 141
             I N L++ YSK G                               DL  A K+F  M +
Sbjct: 97  KFISNHLLNFYSKLGQFKSSLVLFSNMPRRNVMSFNILINGYLQLGDLESAQKLFDEM-S 155

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R+I +W++MI+          A+ +F EM  LGF P+E+   +V+R C+   ++  G  
Sbjct: 156 ERNIATWNAMIAGLTQFEFNKQALSLFKEMYGLGFLPDEFTLGSVLRGCAGLRSLLAGQE 215

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++  LLKCG+  S V VG +L  M++K S  L    K+   M  +  V W  +I    Q 
Sbjct: 216 VHACLLKCGFELSSV-VGSSLAHMYIK-SGSLSDGEKLIKSMPIRTVVAWNTLIAGKAQN 273

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           GCP + +  +  M ++GF PD+ T   V+SACSEL     G+Q+H+  I+ G +  + V 
Sbjct: 274 GCPEEVLNQYNMMKMAGFRPDKITFVSVLSACSELATLGQGQQIHAEVIKAGASSVLAVV 333

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SL+ MY++    G ++DS K F    + +V+ W+++I  Y    GR +EA++LF  M  
Sbjct: 334 SSLISMYSR---SGCLEDSIKAFVDRENFDVVLWSSMIAAY-GFHGRGEEALELFHQMED 389

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD-----DCVGNSLISMYARS 436
            ++  N  TF S+L AC +        + +   VK+ +         CV    + +  R+
Sbjct: 390 LKMEANEVTFLSLLYACSHSGLKEKGTEYFDLMVKKYKLKPRIEHYTCV----VDLLGRA 445

Query: 437 GRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           GR+E+A     S+  + + + + T++ A   +  +E A  +  EI
Sbjct: 446 GRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEMAERISEEI 490



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 125/424 (29%), Positives = 205/424 (48%), Gaps = 16/424 (3%)

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL--- 222
           H+    ++LG         ++I     +++  I + +  F  K G F S + +   +   
Sbjct: 67  HLLQSCIKLGSLFGGKQVHSLIITSGGSKDKFISNHLLNFYSKLGQFKSSLVLFSNMPRR 126

Query: 223 ----IDMFVKGSV---DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
                ++ + G +   DLESA K+FD+M+E+N   W  MI   TQ    + A+ LF +M 
Sbjct: 127 NVMSFNILINGYLQLGDLESAQKLFDEMSERNIATWNAMIAGLTQFEFNKQALSLFKEMY 186

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
             GFLPD FTL  V+  C+ L    +G+++H+  ++ G  L   VG SL  MY K    G
Sbjct: 187 GLGFLPDEFTLGSVLRGCAGLRSLLAGQEVHACLLKCGFELSSVVGSSLAHMYIK---SG 243

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
           S+ D  K+   M    V++W  +I G  Q+G  + E +  ++ M      P+  TF SVL
Sbjct: 244 SLSDGEKLIKSMPIRTVVAWNTLIAGKAQNGCPE-EVLNQYNMMKMAGFRPDKITFVSVL 302

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
            AC  L      +Q++   +K G +    V +SLISMY+RSG +ED+ KAF      ++V
Sbjct: 303 SACSELATLGQGQQIHAEVIKAGASSVLAVVSSLISMYSRSGCLEDSIKAFVDRENFDVV 362

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            +++M+ AY  +   E+A EL H++ED  +  +  TF SLL   S  G   KG +    +
Sbjct: 363 LWSSMIAAYGFHGRGEEALELFHQMEDLKMEANEVTFLSLLYACSHSGLKEKGTEYFDLM 422

Query: 516 IKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAAR 573
           +K    +     Y  ++ +  R   +E A  + + M  + + I W +++     H  A  
Sbjct: 423 VKKYKLKPRIEHYTCVVDLLGRAGRLEEAEGMIRSMPVQPDGIIWKTLLAACKLHKEAEM 482

Query: 574 ALEI 577
           A  I
Sbjct: 483 AERI 486


>gi|242050732|ref|XP_002463110.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
 gi|241926487|gb|EER99631.1| hypothetical protein SORBIDRAFT_02g037960 [Sorghum bicolor]
          Length = 802

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 242/699 (34%), Positives = 383/699 (54%), Gaps = 70/699 (10%)

Query: 233 LESAYKVFDKMTE--KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGV 289
           L +A   FD + +  ++TV    +I+   +      A+ +F  ++ SG L PD ++ + +
Sbjct: 104 LPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVAVFRSLLASGSLRPDDYSFTAL 163

Query: 290 VSACSELELFTSG--KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           +SA   L   +     QL    +++G    + V  +LV +Y KC    +  D+RKV D M
Sbjct: 164 LSAAGHLPNISVRHCAQLQCSVLKSGAGGVLSVSNALVALYMKCEALEATRDARKVLDEM 223

Query: 348 LDHNVMSWTAIITGYVQSG------------------------------GRDKEAVKLFS 377
            D + ++WT ++ GYV+ G                              G   EA +LF 
Sbjct: 224 PDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKFDVVWNAMISGYVHSGMVVEAFELFR 283

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALDDC---VGNSLISMY 433
            M+  +V  + FTF SVL AC N       + V+    + +   + +    V N+L+++Y
Sbjct: 284 RMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITRLQPNFVPEAALPVNNALVTLY 343

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNT-------------------------------MVD 462
           ++ G +  AR+ F+++  K++VS+NT                               MV 
Sbjct: 344 SKCGNIAVARRIFDNMKSKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVS 403

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            Y     SE A +L + +    V    YT+A  +S    +G++  G+Q+H  +++ GFE 
Sbjct: 404 GYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGSLKHGKQLHGHLVQLGFEG 463

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           ++   NALI+MY+RC  V+ A  +F  M + + +SW +MI+   +HG    ALE+F +M+
Sbjct: 464 SNSAGNALITMYARCGAVKEANLMFLVMPNIDSVSWNAMISALGQHGHGREALELFDRMV 523

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           A+GI P+ I+++ VL+AC+H+GL+ EG+++F SM  + GI+   +HY  ++DLLGR+G +
Sbjct: 524 AEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFGIIPGEDHYTRLIDLLGRAGRI 583

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA + I++MP      +W   L  CR  GD ELG HAA+ + +  PQ    +ILLSN Y
Sbjct: 584 GEARDLIKTMPFEPTPSIWEAILSGCRTSGDMELGAHAADQLFKMTPQHDGTYILLSNTY 643

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           ++AG W   A +RK M++R + KE GCSWIEA NKVH F VG+T HP+  ++Y  L+ + 
Sbjct: 644 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEAGNKVHVFVVGDTKHPEAHKVYKFLEMVG 703

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
            ++++ GY+PDT  VLH++E  QK   LF HSE++AV FGL+       + V KNLR+C 
Sbjct: 704 ARMRKLGYVPDTKVVLHDMEPHQKEHILFAHSERLAVGFGLLKLPPGATVTVLKNLRICD 763

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           DCH  + ++S   GREIV+RD  RFHH KDG+CSC +YW
Sbjct: 764 DCHAVMMFMSKAVGREIVVRDVRRFHHFKDGECSCGNYW 802



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 151/578 (26%), Positives = 255/578 (44%), Gaps = 94/578 (16%)

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN-KRDIVSWSSMISSYVNRGKQVDAIH 166
           + +P  V   SL++ Y+  G L  A   F ++   +RD V  +++IS+Y        A+ 
Sbjct: 83  RADPCPVAATSLVAAYAAAGRLPAAVSFFDAVPQARRDTVLHNAVISAYARASHAAPAVA 142

Query: 167 MFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD----VCVGCA 221
           +F  +L  G   P++Y F+A++ A  +  N+++ H      L+C    S     + V  A
Sbjct: 143 VFRSLLASGSLRPDDYSFTALLSAAGHLPNISVRHCAQ---LQCSVLKSGAGGVLSVSNA 199

Query: 222 LIDMFVKGSVDLES---AYKVFDKMTEKNTVGWTLMI---TRCTQLGCPR---------- 265
           L+ +++K    LE+   A KV D+M +K+ + WT M+    R   +G  R          
Sbjct: 200 LVALYMKCEA-LEATRDARKVLDEMPDKDALTWTTMVVGYVRRGDVGAARSVFEEVDVKF 258

Query: 266 ------------------DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
                             +A  LF  M+L     D FT + V+SAC+    F  GK +H 
Sbjct: 259 DVVWNAMISGYVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHG 318

Query: 308 WAIRTGLAL----DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
              R          + V  +LV +Y+KC   G++  +R++FD M   +V+SW  I++GYV
Sbjct: 319 QITRLQPNFVPEAALPVNNALVTLYSKC---GNIAVARRIFDNMKSKDVVSWNTILSGYV 375

Query: 364 QS------------------------------GGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
           +S                              GG  ++A+KLF+ M    V P  +T+A 
Sbjct: 376 ESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAG 435

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            + ACG L      +Q++ H V+ G    +  GN+LI+MYAR G +++A   F  +   +
Sbjct: 436 AISACGELGSLKHGKQLHGHLVQLGFEGSNSAGNALITMYARCGAVKEANLMFLVMPNID 495

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
            VS+N M+ A  ++ +  +A EL   +   G+     +F ++L+  +  G + +G Q   
Sbjct: 496 SVSWNAMISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFE 555

Query: 514 RIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG-- 569
            + +  G       Y  LI +  R   +  A  + K M      S W ++++G    G  
Sbjct: 556 SMKRDFGIIPGEDHYTRLIDLLGRAGRIGEARDLIKTMPFEPTPSIWEAILSGCRTSGDM 615

Query: 570 -FAARALEIFYKMLA--DGIKPNGITYIAVLSACSHAG 604
              A A +  +KM    DG      TYI + +  S AG
Sbjct: 616 ELGAHAADQLFKMTPQHDG------TYILLSNTYSAAG 647



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 99/354 (27%), Positives = 163/354 (46%), Gaps = 49/354 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G V +A      M  +    D  T++ +L +C  +  F  GK VH  +TR  L+PN
Sbjct: 269 YVHSGMVVEAFELFRRMVLERVPLDEFTFTSVLSACANAGFFAHGKSVHGQITR--LQPN 326

Query: 113 SV------ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS---------------- 150
            V      + N+L++LYSKCG++  A +IF +M +K D+VSW++                
Sbjct: 327 FVPEAALPVNNALVTLYSKCGNIAVARRIFDNMKSK-DVVSWNTILSGYVESSCLDKAVE 385

Query: 151 ---------------MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
                          M+S YV+ G   DA+ +F  M      P +Y ++  I AC    +
Sbjct: 386 VFEEMPYKNELSWMVMVSGYVHGGFSEDALKLFNRMRAEDVKPCDYTYAGAISACGELGS 445

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +  G  ++G L++ G F+     G ALI M+ + G+V  + A  +F  M   ++V W  M
Sbjct: 446 LKHGKQLHGHLVQLG-FEGSNSAGNALITMYARCGAV--KEANLMFLVMPNIDSVSWNAM 502

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT-G 313
           I+   Q G  R+A+ LF  M+  G  PDR +   V++AC+   L   G Q      R  G
Sbjct: 503 ISALGQHGHGREALELFDRMVAEGIYPDRISFLTVLTACNHSGLVDEGFQYFESMKRDFG 562

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSG 366
           +         L+D+  +    G + ++R +   M  +     W AI++G   SG
Sbjct: 563 IIPGEDHYTRLIDLLGRA---GRIGEARDLIKTMPFEPTPSIWEAILSGCRTSG 613


>gi|115485519|ref|NP_001067903.1| Os11g0482400 [Oryza sativa Japonica Group]
 gi|77550880|gb|ABA93677.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
 gi|113645125|dbj|BAF28266.1| Os11g0482400 [Oryza sativa Japonica Group]
          Length = 770

 Score =  459 bits (1181), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 244/707 (34%), Positives = 404/707 (57%), Gaps = 26/707 (3%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML  G       +  ++  C  T ++     ++G + K G   +D+ V  +L++ +++ S
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGA-SADMFVATSLVNAYMRCS 127

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                A ++FD M E+N V WT ++T  T    P   + +F++M+  G  P  +TL   +
Sbjct: 128 A-ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +AC        GKQ+H +AI+ G      +G SL  +YAK    GS+D + + F R+ + 
Sbjct: 187 NACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL---GSLDSALRAFWRIPEK 243

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKL----FSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           NV++WT +I+   +    D+E V+L    F DM+   V PN FT  SV+  CG  LD N+
Sbjct: 244 NVITWTTMISACAE----DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNL 299

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            +QV   + K G   +  V NS + +Y R G  ++A + FE + + +++++N M+  YA+
Sbjct: 300 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQ 359

Query: 467 NLNSEK-----------AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            ++S K           A  +  +++ + +    +TF+S+LS  S++ A+ +GEQIHA+ 
Sbjct: 360 IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           IKSGF S+  + +AL++MY++C  ++ A + F EM  R  ++WTSMI+G+++HG    A+
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 479

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           ++F +M   G++PN IT++++LSACS+AGL+ E   +F  M  E+ I   ++HY CM+D+
Sbjct: 480 QLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDM 539

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
             R G + +A  FI+      +  +W + +  CR HG+ EL  +AA+ +LE  P+    +
Sbjct: 540 FVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETY 599

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           ILL N+Y S   W+ VA +RK MK+ ++      SWI   +KV+ F   + +HP+  E+Y
Sbjct: 600 ILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELY 659

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQK--VQYLFQHSEKIAVAFGLISTSKSKPIR 813
             L+ L  K K  GY P  N  L + E+++K     L  HSE++AVA GL+ T     +R
Sbjct: 660 QLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVR 719

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           V KN+ +C DCH++IK  S++  REI++RDS R H  KDG+CSC D+
Sbjct: 720 VTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  259 bits (663), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 293/560 (52%), Gaps = 38/560 (6%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           VQ+A+     M  +G       Y  LL  C+ + +    + VH  + ++    +  +  S
Sbjct: 63  VQEAM----TMLTEGKAVQSAMYVPLLHRCVETGSLGAARAVHGHMAKTGASADMFVATS 118

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L++ Y +C    +A ++F  M  +R++V+W+++++ Y    +    + +FVEMLE+G  P
Sbjct: 119 LVNAYMRCSAARDARRLFDGM-PERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYP 177

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           + Y   A + AC  + +V +G  ++G+ +K G  +S   +G +L  ++ K GS+D  SA 
Sbjct: 178 SHYTLGATLNACLASCDVDLGKQVHGYAIKYGA-ESITSMGNSLCSLYAKLGSLD--SAL 234

Query: 238 KVFDKMTEKNTVGWTLMITRCTQ-LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           + F ++ EKN + WT MI+ C +   C    + LF+DM++ G +P+ FTL+ V+S C   
Sbjct: 235 RAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTR 294

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GKQ+ +++ + G   ++ V  S + +Y +    G  D++ ++F++M D ++++W 
Sbjct: 295 LDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLR---KGETDEAMRLFEQMEDASIITWN 351

Query: 357 AIITGY----------VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           A+I+GY          +Q+  R  +A+ +F D+ +  + P+ FTF+S+L  C  ++    
Sbjct: 352 AMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQ 411

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            EQ++   +K G   D  V ++L++MY + G ++DA KAF  +  +  V++ +M+  Y++
Sbjct: 412 GEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQ 471

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           +   ++A +L  E+   GV  +  TF SLLS  S  G + + E     + K      +CI
Sbjct: 472 HGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK-----EYCI 526

Query: 527 ------YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFY 579
                 Y  +I M+ R   VE AF   K    + N   W+S++ G   HG    A     
Sbjct: 527 EPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586

Query: 580 KMLADGIKPNGI-TYIAVLS 598
           K+L   +KP GI TYI +L+
Sbjct: 587 KLLE--LKPKGIETYILLLN 604


>gi|147854092|emb|CAN83391.1| hypothetical protein VITISV_041405 [Vitis vinifera]
          Length = 886

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/678 (34%), Positives = 391/678 (57%), Gaps = 8/678 (1%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           LGKL+H  +    L+ N  +  SLI+LY  C     A  +F+++ N  DI  W+ ++++ 
Sbjct: 213 LGKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLDITLWNGLMAAC 272

Query: 156 VNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
                 ++ + +F  +L   +  P+ + + +V++ACS    V  G +++  ++K G F  
Sbjct: 273 TKNFIFIEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSG-FAM 331

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV V  + + M+ K +V  E A K+FD+M E++   W  +I+   Q G P  A+ LF +M
Sbjct: 332 DVVVMSSAVGMYAKCNV-FEDAIKLFDEMPERDVASWNNVISCYYQDGQPEKALELFEEM 390

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            +SGF PD  TL+ V+S+C+ L     GK++H   +R+G ALD  V  +LVDMY KC   
Sbjct: 391 KVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSSALVDMYGKC--- 447

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G ++ +++VF+++   NV+SW ++I GY   G   K  ++LF  M +  + P   T +S+
Sbjct: 448 GCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGD-SKSCIELFRRMDEEGIRPTLTTLSSI 506

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L AC   ++  + + ++ + ++     D  V +SLI +Y + G +  A   F+++ + N+
Sbjct: 507 LMACSRSVNLQLGKFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENVFQNMPKTNV 566

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           VS+N M+  Y K  +  +A  +  ++   GV   A TF S+L   S +  + KG++IH  
Sbjct: 567 VSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNF 626

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           II+S  E N  +  AL+ MY++C  V+ A  +F ++ +R+ +SWTSMI  +  HG A  A
Sbjct: 627 IIESKLEINEVVMGALLDMYAKCGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEA 686

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L++F KM     KP+ +T++A+LSACSHAGL+ EG  +F  M  E+G    +EHY+C++D
Sbjct: 687 LKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLID 746

Query: 635 LLGRSGSLTEALEFIRSMP-LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA 693
           LLGR G L EA E ++  P +  DV +  T   AC +H   +LG+    +++E+DP DP+
Sbjct: 747 LLGRVGRLREAYEILQRTPDIREDVGLLSTLFSACHLHKKLDLGEQIGRLLIEKDPDDPS 806

Query: 694 AHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLE 753
            +I+LSN+YAS   W+ V  +R ++KE  L K  GCSWIE   ++H F V + SHP+   
Sbjct: 807 TYIILSNMYASVKKWDEVRKVRLKIKELGLKKNPGCSWIEVGKRIHPFVVEDKSHPQADM 866

Query: 754 IYAELDQLALKIKEFGYL 771
           IY  +  LA  ++++  L
Sbjct: 867 IYECMSILASHVEKYQVL 884



 Score =  243 bits (621), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 149/478 (31%), Positives = 251/478 (52%), Gaps = 8/478 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  +LK+C        GK+VH+ + +S    + V+++S + +Y+KC    +A K+
Sbjct: 296 PDAFTYPSVLKACSGLGRVGYGKMVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKL 355

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +RD+ SW+++IS Y   G+   A+ +F EM   GF P+    + VI +C+   +
Sbjct: 356 FDEM-PERDVASWNNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLD 414

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+  L++ G F  D  V  AL+DM+ K    LE A +VF+++  KN V W  MI
Sbjct: 415 LERGKEIHMELVRSG-FALDGFVSSALVDMYGKCGC-LEMAKEVFEQIQRKNVVSWNSMI 472

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
              +  G  +  I LF  M   G  P   TLS ++ ACS       GK +H + IR  + 
Sbjct: 473 AGYSLKGDSKSCIELFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIRNRVE 532

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D+ V  SL+D+Y KC   G++  +  VF  M   NV+SW  +I+GYV+ G    EA+ +
Sbjct: 533 ADIFVNSSLIDLYFKC---GNIGSAENVFQNMPKTNVVSWNVMISGYVKVGSY-LEALVI 588

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F+DM +  V P+  TF SVL AC  L      ++++   ++    +++ V  +L+ MYA+
Sbjct: 589 FTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAK 648

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +++A   F  L E++ VS+ +M+ AY  +  + +A +L  +++ +       TF ++
Sbjct: 649 CGAVDEALHIFNQLPERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDAKPDKVTFLAI 708

Query: 496 LSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           LS  S  G + +G    +  I + GF+     Y+ LI +  R   +  A+++ +   D
Sbjct: 709 LSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLLGRVGRLREAYEILQRTPD 766



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 132/412 (32%), Positives = 228/412 (55%), Gaps = 27/412 (6%)

Query: 47  SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           +N +  +  DG+ +KA+   + M   G  PD  T + ++ SC R  +   GK +H  L R
Sbjct: 368 NNVISCYYQDGQPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVR 427

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S    +  + ++L+ +Y KCG L  A ++F+ +  ++++VSW+SMI+ Y  +G     I 
Sbjct: 428 SGFALDGFVSSALVDMYGKCGCLEMAKEVFEQI-QRKNVVSWNSMIAGYSLKGDSKSCIE 486

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M E G  P     S+++ ACS + N+ +G  I+G++++    ++D+ V  +LID++
Sbjct: 487 LFRRMDEEGIRPTLTTLSSILMACSRSVNLQLGKFIHGYIIR-NRVEADIFVNSSLIDLY 545

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K   ++ SA  VF  M + N V W +MI+   ++G   +A+ +F DM  +G  PD  T 
Sbjct: 546 FKCG-NIGSAENVFQNMPKTNVVSWNVMISGYVKVGSYLEALVIFTDMRKAGVKPDAITF 604

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + V+ ACS+L +   GK++H++ I + L ++  V  +L+DMYAKC   G+VD++  +F++
Sbjct: 605 TSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVMGALLDMYAKC---GAVDEALHIFNQ 661

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDS 404
           + + + +SWT++I  Y  S G+  EA+KLF  M Q    P+  TF ++L AC    L+D 
Sbjct: 662 LPERDFVSWTSMIAAY-GSHGQAFEALKLFEKMQQSDAKPDKVTFLAILSACSHAGLVDE 720

Query: 405 N-------VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
                   +AE  +  AV+    L D +G        R GR+   R+A+E L
Sbjct: 721 GCYYFNQMIAEYGFKPAVEHYSCLIDLLG--------RVGRL---REAYEIL 761



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/493 (25%), Positives = 245/493 (49%), Gaps = 32/493 (6%)

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           V+A S LE    GK +H   +  GL  ++ +  SL+++Y  C +  S     +  +  LD
Sbjct: 203 VTAGSALEELL-GKLIHQKIVSLGLQNNITLCKSLINLYFSCHLFQSAKLVFQTIENPLD 261

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAE 408
             +  W  ++    ++     E +++F  ++    + P+ FT+ SVLKAC  L      +
Sbjct: 262 --ITLWNGLMAACTKNFIF-IEGLEVFHRLLHFPYLKPDAFTYPSVLKACSGLGRVGYGK 318

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+TH +K G A+D  V +S + MYA+    EDA K F+ + E+++ S+N ++  Y ++ 
Sbjct: 319 MVHTHVIKSGFAMDVVVMSSAVGMYAKCNVFEDAIKLFDEMPERDVASWNNVISCYYQDG 378

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             EKA EL  E++ +G    + T  +++S  + +  + +G++IH  +++SGF  +  + +
Sbjct: 379 QPEKALELFEEMKVSGFKPDSVTLTTVISSCARLLDLERGKEIHMELVRSGFALDGFVSS 438

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ MY +C  +E A +VF++++ +NV+SW SMI G++  G +   +E+F +M  +GI+P
Sbjct: 439 ALVDMYGKCGCLEMAKEVFEQIQRKNVVSWNSMIAGYSLKGDSKSCIELFRRMDEEGIRP 498

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
              T  ++L ACS +  +  G K        + +   +   + ++DL  + G++  A   
Sbjct: 499 TLTTLSSILMACSRSVNLQLG-KFIHGYIIRNRVEADIFVNSSLIDLYFKCGNIGSAENV 557

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD----PAAHILLSNLYAS 704
            ++MP   +V+ W        + G  ++G +   +++  D +     P A    S L A 
Sbjct: 558 FQNMP-KTNVVSWNVM-----ISGYVKVGSYLEALVIFTDMRKAGVKPDAITFTSVLPAC 611

Query: 705 AGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALK 764
           +     +A + K  +  N I E+            K  + E      L++YA+   +   
Sbjct: 612 SQ----LAVLEKGKEIHNFIIES------------KLEINEVVMGALLDMYAKCGAVDEA 655

Query: 765 IKEFGYLPDTNFV 777
           +  F  LP+ +FV
Sbjct: 656 LHIFNQLPERDFV 668



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 58/187 (31%), Positives = 101/187 (54%), Gaps = 4/187 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M + G  PD  T++ +L +C +      GK +H+ +  SKLE N V++
Sbjct: 580 GSYLEALVIFTDMRKAGVKPDAITFTSVLPACSQLAVLEKGKEIHNFIIESKLEINEVVM 639

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+ +Y+KCG ++EA  IF  +  +RD VSW+SMI++Y + G+  +A+ +F +M +   
Sbjct: 640 GALLDMYAKCGAVDEALHIFNQL-PERDFVSWTSMIAAYGSHGQAFEALKLFEKMQQSDA 698

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD-LES 235
            P++  F A++ ACS+   V  G   +  ++    F   V     LID+   G V  L  
Sbjct: 699 KPDKVTFLAILSACSHAGLVDEGCYYFNQMIAEYGFKPAVEHYSCLIDLL--GRVGRLRE 756

Query: 236 AYKVFDK 242
           AY++  +
Sbjct: 757 AYEILQR 763


>gi|356509996|ref|XP_003523727.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15130-like [Glycine max]
          Length = 586

 Score =  459 bits (1180), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 228/584 (39%), Positives = 359/584 (61%), Gaps = 12/584 (2%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L+ +++ CS+  L   GKQ+H    + G  +   VG S++DMY+KC   G V ++ +VF+
Sbjct: 7   LNKILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKC---GMVGEAARVFN 63

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            +   NV+SW A+I GY       +EA+ LF +M +    P+ +T++S LKAC     + 
Sbjct: 64  TLPVRNVISWNAMIAGYTNERN-GEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAG 122

Query: 406 VAEQVYTHAVKRG--RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
              Q++   ++ G        V  +L+ +Y +  RM +ARK F+ + EK+++S++T++  
Sbjct: 123 EGMQIHAALIRHGFPYLAQSAVAGALVDLYVKCRRMAEARKVFDRIEEKSVMSWSTLILG 182

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES- 522
           YA+  N ++A +L  E+ ++      +  +S++   +    + +G+Q+HA  IK  +   
Sbjct: 183 YAQEDNLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLL 242

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
              + N+++ MY +C     A  +F+EM +RNV+SWT MITG+ KHG   +A+E+F +M 
Sbjct: 243 EMSVANSVLDMYMKCGLTVEADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQ 302

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
            +GI+P+ +TY+AVLSACSH+GLI EG K+F  +     I  ++EHYACMVDLLGR G L
Sbjct: 303 ENGIEPDSVTYLAVLSACSHSGLIKEGKKYFSILCSNQKIKPKVEHYACMVDLLGRGGRL 362

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA   I  MPL  +V +W+T L  CR+HGD E+GK   E++L ++  +PA ++++SN+Y
Sbjct: 363 KEAKNLIEKMPLKPNVGIWQTLLSVCRMHGDVEMGKQVGEILLRREGNNPANYVMVSNMY 422

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           A AG+W+    IR+ +K + L KEAG SW+E D ++H F+ G+  HP   EI+  L ++ 
Sbjct: 423 AHAGYWKESEKIRETLKRKGLKKEAGRSWVEMDKEIHIFYNGDGMHPLIEEIHEVLKEME 482

Query: 763 LKIK-EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI----STSKSKPIRVFKN 817
            ++K E GY+   NF LH++EEE K++ L  HSEK+A+   L+         + IR+FKN
Sbjct: 483 KRVKEEMGYVHSINFSLHDVEEESKMESLRVHSEKLAIGLVLVRRGLKLKGERVIRIFKN 542

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVCGDCH  IK +S V     V+RD+NRFH  ++G CSC DYW
Sbjct: 543 LRVCGDCHAFIKGLSKVLKIAFVVRDANRFHRFENGLCSCGDYW 586



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/318 (33%), Positives = 186/318 (58%), Gaps = 10/318 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L  C + R    GK VH ++ +   +   V+ NS+I +YSKCG + EA ++F ++   R
Sbjct: 10  ILNKCSKRRLLDQGKQVHGVVEKLGFDVIXVVGNSMIDMYSKCGMVGEAARVFNTL-PVR 68

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           +++SW++MI+ Y N     +A+++F EM E G  P+ Y +S+ ++ACS  +    G  I+
Sbjct: 69  NVISWNAMIAGYTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIH 128

Query: 204 GFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
             L++ G+ + +   V  AL+D++VK    +  A KVFD++ EK+ + W+ +I    Q  
Sbjct: 129 AALIRHGFPYLAQSAVAGALVDLYVK-CRRMAEARKVFDRIEEKSVMSWSTLILGYAQED 187

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT--GLALDVCV 320
             ++A+ LF ++  S    D F LS ++   ++  L   GKQ+H++ I+   GL L++ V
Sbjct: 188 NLKEAMDLFRELRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGL-LEMSV 246

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             S++DMY KC +    D    +F  ML+ NV+SWT +ITGY + G  +K AV+LF++M 
Sbjct: 247 ANSVLDMYMKCGLTVEAD---ALFREMLERNVVSWTVMITGYGKHGIGNK-AVELFNEMQ 302

Query: 381 QGQVAPNHFTFASVLKAC 398
           +  + P+  T+ +VL AC
Sbjct: 303 ENGIEPDSVTYLAVLSAC 320



 Score =  118 bits (295), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 185/408 (45%), Gaps = 50/408 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE-- 110
           + N+   ++A+     M +KG  PD  TYS  LK+C  +     G  +H+ L R      
Sbjct: 80  YTNERNGEEALNLFREMREKGEVPDGYTYSSSLKACSCADAAGEGMQIHAALIRHGFPYL 139

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
             S +  +L+ LY KC  + EA K+F  +  ++ ++SWS++I  Y       +A+ +F E
Sbjct: 140 AQSAVAGALVDLYVKCRRMAEARKVFDRI-EEKSVMSWSTLILGYAQEDNLKEAMDLFRE 198

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           + E     + +  S++I   ++   +  G  ++ + +K  Y   ++ V  +++DM++K  
Sbjct: 199 LRESRHRMDGFVLSSIIGVFADFALLEQGKQMHAYTIKVPYGLLEMSVANSVLDMYMKCG 258

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           + +E A  +F +M E+N V WT+MIT   + G    A+ LF +M  +G  PD  T   V+
Sbjct: 259 LTVE-ADALFREMLERNVVSWTVMITGYGKHGIGNKAVELFNEMQENGIEPDSVTYLAVL 317

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSL---VDMYAKCTVDGSVDDSRKVFDRM 347
           SACS   L   GK+  S          +C    +   V+ YA C VD             
Sbjct: 318 SACSHSGLIKEGKKYFSI---------LCSNQKIKPKVEHYA-CMVD------------- 354

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
                          +  GGR KEA  L   M    + PN   + ++L  C    D  + 
Sbjct: 355 --------------LLGRGGRLKEAKNLIEKM---PLKPNVGIWQTLLSVCRMHGDVEMG 397

Query: 408 EQVYTHAVKR-GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           +QV    ++R G    + V  S  +MYA +G  +++ K  E+L  K L
Sbjct: 398 KQVGEILLRREGNNPANYVMVS--NMYAHAGYWKESEKIRETLKRKGL 443


>gi|449470118|ref|XP_004152765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Cucumis sativus]
          Length = 797

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 251/710 (35%), Positives = 388/710 (54%), Gaps = 86/710 (12%)

Query: 232 DLESAYKVFD--KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +LE   ++F+   +  +++V +  MIT     G    A+ LF  M    F PD FT + V
Sbjct: 94  NLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDDFTFTSV 153

Query: 290 VSACSELELFTSGKQ----LHSWAIRTGLALDVCVGCS----LVDMYAKCTVD-----GS 336
           +SA   L LF   +Q    +H   ++TG+    CV  S    L+ +Y K   +      +
Sbjct: 154 LSA---LVLFVGNEQQCGQMHCAVVKTGMG---CVSSSVLNALLSVYVKRASELGIPCSA 207

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQS----GGRD----------------------- 369
           +  +RK+FD M   + ++WT +ITGYV++    G R+                       
Sbjct: 208 MVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWNAMISGYVHC 267

Query: 370 ---KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK---------- 416
              +EA+ L   M    +  +  T+ +++ AC N+    + +Q++ + +K          
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFC 327

Query: 417 ------------RGRALDDC-------------VGNSLISMYARSGRMEDARKAFESLFE 451
                       +   +D+                N+++S Y  +GRME+A+  FE +  
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRMEEAKSFFEEMPV 387

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           KNL++   M+   A+N   ++  +L  ++   G     + FA  L+  S +GA+  G Q+
Sbjct: 388 KNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQL 447

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA+++  G+ES+  + NA+ISMY++C  VEAA  VF  M   +++SW SMI    +HG  
Sbjct: 448 HAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWNSMIAALGQHGHG 507

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
            +A+E+F +ML +G+ P+ IT++ VL+ACSHAGL+ +G  +F SM + +GI    +HYA 
Sbjct: 508 VKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLESYGITPCEDHYAR 567

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           MVDL  R+G  + A   I SMP      VW   L  CR+HG+ +LG  AAE + +  PQ+
Sbjct: 568 MVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQLFKLMPQN 627

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              ++LLSN+YA  G W  VA +RK M+++ + KE  CSWIE +NKVH F V +  HP+ 
Sbjct: 628 DGTYVLLSNIYADVGRWNDVAKVRKLMRDQAVRKEPACSWIEVENKVHVFMVDDDVHPEV 687

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
           L +Y  L+QL L++K+ GY+PDT FVLH++E EQK   L  HSEK+AV FG++       
Sbjct: 688 LSVYRYLEQLGLEMKKLGYIPDTKFVLHDMEYEQKEHALSTHSEKLAVGFGIMKLPPDAT 747

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +RVFKN+R+CGDCH A K++S V  REI++RD  RFHH K+G CSC DYW
Sbjct: 748 VRVFKNIRICGDCHNAFKFMSKVARREIIVRDRKRFHHFKNGDCSCRDYW 797



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 155/646 (23%), Positives = 268/646 (41%), Gaps = 135/646 (20%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK---------- 142
           +F L + VH+ +  S  +P    LN L+ +Y K  ++  A ++F+ + N           
Sbjct: 28  SFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNPDAIARTTLIT 87

Query: 143 ----------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
                                 RD V +++MI+ Y + G    A+ +F  M    F P++
Sbjct: 88  AYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRAMRRDDFRPDD 147

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC---VGC-------ALIDMFVKGS 230
           + F++V+ A           +  G   +CG     V    +GC       AL+ ++VK +
Sbjct: 148 FTFTSVLSALV---------LFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKRA 198

Query: 231 VDLE-------SAYKVFDKMTEKNTVGWTLMITRCTQ----------------------- 260
            +L        SA K+FD+M +++ + WT MIT   +                       
Sbjct: 199 SELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMVENLGAAWN 258

Query: 261 --------LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
                    GC ++A+ L   M   G   D  T + ++SAC+ +  F  GKQ+H++ ++ 
Sbjct: 259 AMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKN 318

Query: 313 GL----ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-- 366
            L    +  + V  +L+ +Y K   +  VD++RK+F  M   N+++W AI++GYV +G  
Sbjct: 319 ELNPNHSFCLSVSNALITLYCK---NNKVDEARKIFYAMPVRNIITWNAILSGYVNAGRM 375

Query: 367 ----------------------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
                                       G   E +KLF  M      P  F FA  L AC
Sbjct: 376 EEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTAC 435

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
             L       Q++   V  G      VGN++ISMYA+ G +E A   F ++   +LVS+N
Sbjct: 436 SVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVDLVSWN 495

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           +M+ A  ++ +  KA EL  ++   GV     TF ++L+  S  G + KG      +++S
Sbjct: 496 SMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES 555

Query: 519 -GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG---FAAR 573
            G       Y  ++ ++ R      A  V   M  +     W +++ G   HG       
Sbjct: 556 YGITPCEDHYARMVDLFCRAGMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIE 615

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           A E  +K++      N  TY+ + +  +  G  ++  K  + M D+
Sbjct: 616 AAEQLFKLMPQ----NDGTYVLLSNIYADVGRWNDVAKVRKLMRDQ 657



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 136/570 (23%), Positives = 234/570 (41%), Gaps = 127/570 (22%)

Query: 260 QLGCPRDAIRLFL------DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           QL  P+D     L       MI SGF P    L+ ++    +       +QL        
Sbjct: 19  QLCSPQDPASFSLARAVHAHMIASGFKPRGHFLNRLLEMYCKSSNVVYARQLFEEIPNP- 77

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLDHNVMSWTAIITGYVQSGGRDKE 371
              D     +L+  Y  C + G+++  R++F+   +   + + + A+ITGY  +G     
Sbjct: 78  ---DAIARTTLITAY--CAL-GNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGD-GHS 130

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKA----------CGNL-----------LDSNVAEQV 410
           A++LF  M +    P+ FTF SVL A          CG +           + S+V   +
Sbjct: 131 ALELFRAMRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNAL 190

Query: 411 YTHAVKRGRAL--------------------DDCVGNSLISMYARSGRMEDARKAFESLF 450
            +  VKR   L                    D+    ++I+ Y R+  +  AR+ FE++ 
Sbjct: 191 LSVYVKRASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAMV 250

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E    ++N M+  Y      ++A  L  ++   G+     T+ +++S  +++G+   G+Q
Sbjct: 251 ENLGAAWNAMISGYVHCGCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQ 310

Query: 511 IHARIIKSGFESNH----CIYNALISMYSRCANVEAAFQVFKEMEDRNVISW-------- 558
           +HA I+K+    NH     + NALI++Y +   V+ A ++F  M  RN+I+W        
Sbjct: 311 MHAYILKNELNPNHSFCLSVSNALITLYCKNNKVDEARKIFYAMPVRNIITWNAILSGYV 370

Query: 559 -----------------------TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
                                  T MI+G A++GF    L++F +M  DG +P    +  
Sbjct: 371 NAGRMEEAKSFFEEMPVKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAG 430

Query: 596 VLSACS-----------HAGLISEGWKH-------FRSMYDEHGIVQRME---------- 627
            L+ACS           HA L+  G++          SMY + G+V+  E          
Sbjct: 431 ALTACSVLGALENGRQLHAQLVHLGYESSLSVGNAMISMYAKCGVVEAAESVFVTMPSVD 490

Query: 628 --HYACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              +  M+  LG+ G   +A+E    M    +  D + + T L AC   G  E G+H   
Sbjct: 491 LVSWNSMIAALGQHGHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFN 550

Query: 683 MILEQDPQDPAA--HILLSNLYASAGHWEY 710
            +LE     P    +  + +L+  AG + Y
Sbjct: 551 SMLESYGITPCEDHYARMVDLFCRAGMFSY 580



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 168/366 (45%), Gaps = 48/366 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS--- 113
           G  Q+A+     M   G   D  TY+ ++ +C    +F +GK +H+ + +++L PN    
Sbjct: 268 GCFQEALTLCRKMRFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFC 327

Query: 114 -VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM- 171
             + N+LI+LY K   ++EA KIF +M   R+I++W++++S YVN G+  +A   F EM 
Sbjct: 328 LSVSNALITLYCKNNKVDEARKIFYAM-PVRNIITWNAILSGYVNAGRMEEAKSFFEEMP 386

Query: 172 -----------------------LEL-------GFCPNEYCFSAVIRACSNTENVAIGHI 201
                                  L+L       GF P ++ F+  + ACS    +  G  
Sbjct: 387 VKNLLTLTVMISGLAQNGFGDEGLKLFKQMRLDGFEPCDFAFAGALTACSVLGALENGRQ 446

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++  L+  GY +S + VG A+I M+ K  V +E+A  VF  M   + V W  MI    Q 
Sbjct: 447 LHAQLVHLGY-ESSLSVGNAMISMYAKCGV-VEAAESVFVTMPSVDLVSWNSMIAALGQH 504

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G    AI LF  M+  G  PDR T   V++ACS   L   G+   +  + +   +  C  
Sbjct: 505 GHGVKAIELFDQMLKEGVFPDRITFLTVLTACSHAGLVEKGRHYFNSMLES-YGITPCED 563

Query: 322 --CSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAIITGYVQSGGRD---KEAVKL 375
               +VD++ +    G    +R V D M        W A++ G    G  D   + A +L
Sbjct: 564 HYARMVDLFCRA---GMFSYARIVIDSMPSKPGAPVWEALLAGCRIHGNMDLGIEAAEQL 620

Query: 376 FSDMIQ 381
           F  M Q
Sbjct: 621 FKLMPQ 626



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 130/320 (40%), Gaps = 54/320 (16%)

Query: 422 DDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           D     +LI+ Y   G +E  R+ F    L+ ++ V YN M+  YA N +   A EL   
Sbjct: 78  DAIARTTLITAYCALGNLELGREIFNGTPLYMRDSVFYNAMITGYAHNGDGHSALELFRA 137

Query: 480 IEDTGVGTSAYTFASLLSG-ASSIGAIGKGEQIHARIIKSGFES-NHCIYNALISMYSR- 536
           +         +TF S+LS     +G   +  Q+H  ++K+G    +  + NAL+S+Y + 
Sbjct: 138 MRRDDFRPDDFTFTSVLSALVLFVGNEQQCGQMHCAVVKTGMGCVSSSVLNALLSVYVKR 197

Query: 537 -------CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
                  C+ + +A ++F EM  R+ ++WT+MITG+ ++     A E+F  M    ++  
Sbjct: 198 ASELGIPCSAMVSARKLFDEMPKRDELTWTTMITGYVRNDDLNGAREVFEAM----VENL 253

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
           G  + A++S   H G   E     R M                                 
Sbjct: 254 GAAWNAMISGYVHCGCFQEALTLCRKM--------------------------------- 280

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL-----LSNLYAS 704
           R + +  D + + T + AC   G  ++GK     IL+ +     +  L     L  LY  
Sbjct: 281 RFLGIQFDDITYTTIISACANVGSFQMGKQMHAYILKNELNPNHSFCLSVSNALITLYCK 340

Query: 705 AGHWEYVANIRKRMKERNLI 724
               +    I   M  RN+I
Sbjct: 341 NNKVDEARKIFYAMPVRNII 360


>gi|302820671|ref|XP_002992002.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
 gi|300140244|gb|EFJ06970.1| hypothetical protein SELMODRAFT_134463 [Selaginella moellendorffii]
          Length = 620

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/623 (39%), Positives = 358/623 (57%), Gaps = 38/623 (6%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G  PD+      + AC+       G+Q+HS  + +GL  ++ +  SLV+MY KC  
Sbjct: 1   MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQ- 59

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--------------------------- 366
              V  + KVFD ML  +V+SWTA++  Y Q+G                           
Sbjct: 60  --DVPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINAS 117

Query: 367 ---GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
               + ++A++LF  M    +  N FT  S+L+ACG L D  +A Q++  A   G   + 
Sbjct: 118 VGNSKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNS 177

Query: 424 -CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA--KNLNSEKAFELLHEI 480
             VGNS+++MYAR G + D +KAF+SL EK LV+++ M+ AYA  K+ +  +AF+   E+
Sbjct: 178 TAVGNSVVNMYARCGSLLDTKKAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEM 237

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF-ESNHCIYNALISMYSRCAN 539
           E  G+     TF S L   +++  +  G  +H R   SGF E++  + N +I+MY +C +
Sbjct: 238 EAEGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKCGS 297

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
              A  VF +M ++ +ISW S+I  +A +G A  AL    +ML  G  P+  T +++L  
Sbjct: 298 PSDAKLVFDQMPEKCLISWNSLIVAYAHNGHALEALSSLQEMLLQGFDPDSGTSVSILYG 357

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP-LSADV 658
            SHAGL+  G +HFRS   +HG+        C+VDLL R G L  A E I + P   AD 
Sbjct: 358 LSHAGLLERGVEHFRSSIQDHGLEPSSGQLKCLVDLLARKGFLDAAEELILASPACQADT 417

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           + W T L AC+ +GD + G   AE + E +PQ   + ++L+NLYAS G W   + IRK M
Sbjct: 418 IAWMTLLAACKSYGDPQRGIRCAERVFELEPQHSGSFVVLANLYASVGRWSDASRIRKMM 477

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           +  ++ KE GCSWIE    VH+F  GE+ HPK  EI  EL++L L+++E GY+PDT  V+
Sbjct: 478 ERMSVKKEPGCSWIELSGSVHEFISGESKHPKIREICEELEKLTLRMREAGYVPDTTNVV 537

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H++EE  K + L +HSE++A+ FGL+ST   + IRV KNLRVC DCH A K IS V GRE
Sbjct: 538 HDVEEGDKEEILSRHSERLAIVFGLMSTRPGETIRVVKNLRVCSDCHAATKIISSVVGRE 597

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           IV+RDS+RFHH K G+CSC D+W
Sbjct: 598 IVVRDSSRFHHFKHGQCSCGDFW 620



 Score =  143 bits (360), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 186/414 (44%), Gaps = 47/414 (11%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  PD   + + L +C  S     G+ +HS +  S L  N +I NSL+++Y KC D
Sbjct: 1   MQWEGTRPDKVVFVIALDACAASGELDHGRQIHSSVVDSGLTSNIIISNSLVNMYGKCQD 60

Query: 129 LNEANKIFKSM------------------------------GNKRDIVSWSSMISSYVNR 158
           +  A K+F  M                                ++D VSW+++I++ V  
Sbjct: 61  VPCAEKVFDGMLLRDVVSWTAMLAVYAQNGCWSQALHVFEAMPRKDDVSWNAVINASVGN 120

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
            K  DA+ +F  M   G   NE+   +++ AC   E++ +   I+      G+  +   V
Sbjct: 121 SKFQDALELFHGMELEGLRSNEFTLLSLLEACGGLEDLKLARQIHARAAAGGFGGNSTAV 180

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL--GCPRDAIRLFLDMIL 276
           G ++++M+ +    L++  K FD + EK  V W++M+    Q   G  R A + F +M  
Sbjct: 181 GNSVVNMYARCGSLLDTK-KAFDSLEEKGLVAWSIMLAAYAQSKDGSGRRAFKFFQEMEA 239

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDG 335
            G  P   T    + AC+ +     G+ +H  A  +G     + +G ++++MY KC   G
Sbjct: 240 EGIKPGEVTFVSALDACAAMATLEHGRSMHRRAAASGFVETSLVLGNTIINMYGKC---G 296

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
           S  D++ VFD+M +  ++SW ++I  Y  + G   EA+    +M+     P+  T  S+L
Sbjct: 297 SPSDAKLVFDQMPEKCLISWNSLIVAYAHN-GHALEALSSLQEMLLQGFDPDSGTSVSIL 355

Query: 396 KAC--GNLLDSNVA---EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
                  LL+  V      +  H ++       C    L+ + AR G ++ A +
Sbjct: 356 YGLSHAGLLERGVEHFRSSIQDHGLEPSSGQLKC----LVDLLARKGFLDAAEE 405


>gi|225450539|ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 260/764 (34%), Positives = 415/764 (54%), Gaps = 77/764 (10%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+ + +IF  + N    + W++M+ +Y+       A+ ++  M++    P+ Y +  V++
Sbjct: 91  LDYSLQIFDRIENSNGFM-WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQ 149

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC+       G  I+  +LK G FDSDV V   LI+M+     ++  A K+FD+    ++
Sbjct: 150 ACAVRLLEFGGKEIHDHVLKVG-FDSDVYVQNTLINMYAVCG-NMRDARKLFDESPVLDS 207

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  ++    + G   +A  +F  M      P R     +V++ S + L   GK     
Sbjct: 208 VSWNSILAGYVKKGDVEEAKLIFDQM------PQR----NIVASNSMIVLL--GKM---- 251

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
                                     G V ++ K+F+ M + +++SW+A+I+GY Q+G  
Sbjct: 252 --------------------------GQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMY 285

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG---------- 418
           + EA+ +F +M    +  +     SVL AC +L      + ++   ++ G          
Sbjct: 286 E-EALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNA 344

Query: 419 ---------------------RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
                                  LD    NS+IS   + G +E AR  F+ + EK++VS+
Sbjct: 345 LIHMYSGSGEIMDAQKLFNGSHNLDQISWNSMISGCMKCGSVEKARALFDVMPEKDIVSW 404

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           + ++  YA++    +   L HE++   +        S++S  + + A+ +G+ +HA I K
Sbjct: 405 SAVISGYAQHDCFSETLALFHEMQLGQIRPDETILVSVISACTHLAALDQGKWVHAYIRK 464

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +G + N  +   L+ MY +C  VE A +VF  ME++ V SW ++I G A +G   R+L++
Sbjct: 465 NGLKVNVILGTTLLDMYMKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDM 524

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F +M  +G+ PN IT++ VL AC H GL+ EG  HF SM ++HGI   ++HY CMVDLLG
Sbjct: 525 FSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLG 584

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L EA + I SMP++ DV  W   LGAC+ HGDTE+G+     ++E  P     H+L
Sbjct: 585 RAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDTEMGERVGRKLIELQPDHDGFHVL 644

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN++AS G WE V  +R  MK++ ++K  GCS IEA+  VH+F  G+ +HP   ++   
Sbjct: 645 LSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEANGVVHEFLAGDKTHPWINKVEGM 704

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           L+++A ++K  GY PDTN V  +++EE+K   LF+HSEK+A+AFGL++ S   PIR+ KN
Sbjct: 705 LNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHSEKLAIAFGLLTISPPTPIRIMKN 764

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LR+C DCHTA K IS    REIV+RD +RFH+ K+G CSC DYW
Sbjct: 765 LRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGACSCMDYW 808



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/603 (24%), Positives = 281/603 (46%), Gaps = 77/603 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSC-IRSRNFHLGKLVHSLLTRSKLEP 111
           ++     +KA+    LM +    PD  TY L++++C +R   F  GK +H  + +   + 
Sbjct: 116 YIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG-GKEIHDHVLKVGFDS 174

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  + N+LI++Y+ CG++ +A K+F       D VSW+S+++ YV +G   +A  +F +M
Sbjct: 175 DVYVQNTLINMYAVCGNMRDARKLFDE-SPVLDSVSWNSILAGYVKKGDVEEAKLIFDQM 233

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            +                 SN+  V +G +                           G V
Sbjct: 234 PQRNI------------VASNSMIVLLGKM---------------------------GQV 254

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
               A+K+F++M EK+ V W+ +I+   Q G   +A+ +F++M  +G   D   +  V+S
Sbjct: 255 --MEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLS 312

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY----------------------- 328
           AC+ L +  +GK +H   IR G+   V +  +L+ MY                       
Sbjct: 313 ACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSGSGEIMDAQKLFNGSHNLDQIS 372

Query: 329 -----AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                + C   GSV+ +R +FD M + +++SW+A+I+GY Q      E + LF +M  GQ
Sbjct: 373 WNSMISGCMKCGSVEKARALFDVMPEKDIVSWSAVISGYAQHDCF-SETLALFHEMQLGQ 431

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + P+     SV+ AC +L   +  + V+ +  K G  ++  +G +L+ MY + G +E+A 
Sbjct: 432 IRPDETILVSVISACTHLAALDQGKWVHAYIRKNGLKVNVILGTTLLDMYMKCGCVENAL 491

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           + F  + EK + S+N ++   A N   E++ ++  E+++ GV  +  TF  +L     +G
Sbjct: 492 EVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMG 551

Query: 504 AIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSM 561
            + +G    A +I K G E N   Y  ++ +  R   +  A ++ + M    +V +W ++
Sbjct: 552 LVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGAL 611

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           +    KHG       +  K++   ++P+   +  +LS    +    E     R M  + G
Sbjct: 612 LGACKKHGDTEMGERVGRKLIE--LQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQG 669

Query: 622 IVQ 624
           +V+
Sbjct: 670 VVK 672


>gi|294463969|gb|ADE77505.1| unknown [Picea sitchensis]
          Length = 514

 Score =  458 bits (1179), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/514 (43%), Positives = 324/514 (63%), Gaps = 31/514 (6%)

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M+   V PN FT ++V+KAC ++      +Q + + +K G   D  V  +L+ MYAR G 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED---------------- 482
           +EDA   F+ + E++  ++N M+  +A+N + +KA +L +E+ +                
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 483 ---------------TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
                          TG+ +  +   S+LS  + + A+  G Q HA +++SGF  +  + 
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDIVVG 180

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           +AL+ MY++  ++E A QVF +M  RN +SW S+ITG A+HG    A+ +F +ML  GIK
Sbjct: 181 SALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAGIK 240

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           PN I+++ VLSACSH GL++EG  +F  M   +GIV  + HY CM+DLLGR+G L EA  
Sbjct: 241 PNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLDEAEN 300

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
           FI  MP+  DV VW   LGACR+HG+TEL K  AE +L  + Q    ++LLSN+YA+AG 
Sbjct: 301 FINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGIYVLLSNIYAAAGQ 360

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W+  A +RK MK+R ++K+ G SWIE    +H F  GETSHP+  EI+  L+ L+ K+K 
Sbjct: 361 WDDAAKVRKLMKDRGVMKQPGYSWIEVKTIMHAFVAGETSHPQLKEIHEFLESLSRKMKA 420

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY+P+ NFVL ++E+++K   L  HSEK+A+AFG+I+T+    IRV KNLRVCGDCHT 
Sbjct: 421 AGYVPNKNFVLQDVEDDEKELSLSHHSEKLAIAFGIINTNPGTTIRVAKNLRVCGDCHTV 480

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IK+IS+   R+IV+RD+NRFHH KDG+CSC DYW
Sbjct: 481 IKFISLNFTRKIVVRDANRFHHFKDGRCSCGDYW 514



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 95/260 (36%), Positives = 146/260 (56%), Gaps = 39/260 (15%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M+  G  PN++  S V++AC++  ++  G   + +++K G F+SDV V  AL+ M+ + G
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMG-FESDVVVQTALVHMYARCG 59

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM----------ILSGF 279
           S  LE A  VFDKM+E++T  W  MIT   Q    + A++LF +M          +++G+
Sbjct: 60  S--LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGY 117

Query: 280 L---------------------PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
                                  DRF +  V+SAC++L     G+Q H++ +++G ALD+
Sbjct: 118 AQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALDI 177

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG +LVDMYAK    GS++D+ +VFD+M   N +SW +IITG  Q  GR  +AV LF  
Sbjct: 178 VVGSALVDMYAK---SGSMEDACQVFDKMPQRNEVSWNSIITGCAQH-GRGNDAVLLFEQ 233

Query: 379 MIQGQVAPNHFTFASVLKAC 398
           M+Q  + PN  +F  VL AC
Sbjct: 234 MLQAGIKPNEISFVGVLSAC 253



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 189/385 (49%), Gaps = 39/385 (10%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M+  G  P++FTLS VV AC+ +     GKQ H++ I+ G   DV V  +LV MYA+C  
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARC-- 58

Query: 334 DGSVDDSRKVFDRMLDH-------------------------------NVMSWTAIITGY 362
            GS++D+  VFD+M +                                +V+SWTA+I GY
Sbjct: 59  -GSLEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGY 117

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q+G  D E++ +F+ M +  +  + F   SVL AC +L    +  Q + + V+ G ALD
Sbjct: 118 AQNGYGD-ESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD 176

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             VG++L+ MYA+SG MEDA + F+ + ++N VS+N+++   A++     A  L  ++  
Sbjct: 177 IVVGSALVDMYAKSGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQ 236

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVE 541
            G+  +  +F  +LS  S  G + +G      + ++ G   +   Y  +I +  R   ++
Sbjct: 237 AGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGCLD 296

Query: 542 AAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
            A      M  + +V  W +++     HG    A  I   +L   ++  GI Y+ + +  
Sbjct: 297 EAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRIAEHLLGMEVQIAGI-YVLLSNIY 355

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQR 625
           + AG   +  K  R +  + G++++
Sbjct: 356 AAAGQWDDAAK-VRKLMKDRGVMKQ 379



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 180/371 (48%), Gaps = 42/371 (11%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  KG  P+  T S ++K+C    +   GK  H+ + +   E + V+  +L+ +Y++CG 
Sbjct: 1   MVGKGVKPNQFTLSTVVKACASIASLEQGKQAHNYIIKMGFESDVVVQTALVHMYARCGS 60

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
           L +A  +F  M  +                              RD+VSW+++I+ Y   
Sbjct: 61  LEDAGHVFDKMSERSTRTWNAMITGHAQNRDMKKALKLFYEMSERDVVSWTAVIAGYAQN 120

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           G   +++++F +M + G   + +   +V+ AC++   + +G   + ++++ G F  D+ V
Sbjct: 121 GYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSG-FALDIVV 179

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
           G AL+DM+ K S  +E A +VFDKM ++N V W  +IT C Q G   DA+ LF  M+ +G
Sbjct: 180 GSALVDMYAK-SGSMEDACQVFDKMPQRNEVSWNSIITGCAQHGRGNDAVLLFEQMLQAG 238

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSV 337
             P+  +  GV+SACS   L   G+   +   +  G+  DV     ++D+  +    G +
Sbjct: 239 IKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRA---GCL 295

Query: 338 DDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG---QVAPNHFTFAS 393
           D++    + M ++ +V  W A++      G  + E  K  ++ + G   Q+A  +   ++
Sbjct: 296 DEAENFINGMPVEPDVSVWGALLGACRIHG--NTELAKRIAEHLLGMEVQIAGIYVLLSN 353

Query: 394 VLKACGNLLDS 404
           +  A G   D+
Sbjct: 354 IYAAAGQWDDA 364



 Score = 79.7 bits (195), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 103/219 (47%), Gaps = 3/219 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   +++   + M + G   D      +L +C       LG+  H+ + +S    +
Sbjct: 117 YAQNGYGDESLNVFNQMRKTGMKSDRFIMGSVLSACADLAALELGRQFHAYVVQSGFALD 176

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V+ ++L+ +Y+K G + +A ++F  M  +R+ VSW+S+I+     G+  DA+ +F +ML
Sbjct: 177 IVVGSALVDMYAKSGSMEDACQVFDKM-PQRNEVSWNSIITGCAQHGRGNDAVLLFEQML 235

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           + G  PNE  F  V+ ACS+T  V  G   +  + +      DV     +ID+  +    
Sbjct: 236 QAGIKPNEISFVGVLSACSHTGLVNEGRGYFNLMTQNYGIVPDVSHYTCMIDLLGRAGC- 294

Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRL 270
           L+ A    + M  E +   W  ++  C   G    A R+
Sbjct: 295 LDEAENFINGMPVEPDVSVWGALLGACRIHGNTELAKRI 333


>gi|449459160|ref|XP_004147314.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 695

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 233/648 (35%), Positives = 373/648 (57%), Gaps = 41/648 (6%)

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+    AL+  + K S  +++    FD+M  +++V +   I   +   CP++++ LF  M
Sbjct: 88  DIFSWNALLSAYAK-SGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRM 146

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
              GF P  +T+  +++A ++L     GKQ+H   I      +V +  +L DMYAKC   
Sbjct: 147 QREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC--- 203

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G ++ +R +FD +   N++SW  +I+GY ++G  +K  + L   M      P+  T +++
Sbjct: 204 GEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEK-CIGLLHQMRLSGHMPDQVTMSTI 262

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           + A                                   Y + GR+++AR+ F    EK++
Sbjct: 263 IAA-----------------------------------YCQCGRVDEARRVFSEFKEKDI 287

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           V +  M+  YAKN   E A  L +E+    +   +YT +S++S  + + ++  G+ +H +
Sbjct: 288 VCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGK 347

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
            I +G  +N  + +ALI MYS+C  ++ A  VF  M  RNV+SW +MI G A++G    A
Sbjct: 348 SILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDA 407

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           LE+F  ML    KP+ +T+I +LSAC H   I +G ++F S+ ++HG+   ++HYACMV+
Sbjct: 408 LELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLDHYACMVN 467

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LLGR+G + +A+  I++M    D L+W T L  C   GD    + AA  + E DP     
Sbjct: 468 LLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVP 527

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           +I+LSN+YAS G W+ VA++R  MK +N+ K AG SWIE DN+VH+F   + +HP++ +I
Sbjct: 528 YIMLSNMYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDI 587

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS-KPIR 813
           Y +L+ L  K++E G+ P+TN VLH++ E++K + +  HSEK+A+AFGLI       PIR
Sbjct: 588 YEKLNMLIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIR 647

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + KN+R+C DCH  +K+ S + GR+I+LRDSNRFHH   GKCSCND W
Sbjct: 648 IIKNIRICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 133/519 (25%), Positives = 246/519 (47%), Gaps = 76/519 (14%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFK 137
           + Y+ L+  C+R+   +  K + S +     +P +S + N L+ LY+K G L +A  +F 
Sbjct: 23  EAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFD 82

Query: 138 SMGNKRDIVSWSSMISSYVNRGK-------------------------------QVDAIH 166
            M  KRDI SW++++S+Y   G                                  +++ 
Sbjct: 83  KML-KRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M   GF P EY   +++ A +   ++  G  I+G ++    F  +V +  AL DM+
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSII-VRNFLGNVFIWNALTDMY 200

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K   ++E A  +FD +T+KN V W LMI+   + G P   I L   M LSG +PD+ T+
Sbjct: 201 AKCG-EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           S +++A                                   Y +C   G VD++R+VF  
Sbjct: 260 STIIAA-----------------------------------YCQC---GRVDEARRVFSE 281

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
             + +++ WTA++ GY ++ GR+++A+ LF++M+   + P+ +T +SV+ +C  L   + 
Sbjct: 282 FKEKDIVCWTAMMVGYAKN-GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH 340

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + V+  ++  G   +  V ++LI MY++ G ++DAR  F  +  +N+VS+N M+   A+
Sbjct: 341 GQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQ 400

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHC 525
           N + + A EL   +          TF  +LS       I +G++    I  + G      
Sbjct: 401 NGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSITNQHGMTPTLD 460

Query: 526 IYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMIT 563
            Y  ++++  R   +E A  + K M  D + + W+++++
Sbjct: 461 HYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499



 Score =  175 bits (444), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 213/432 (49%), Gaps = 53/432 (12%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q+++     M ++G  P   T   +L +  +  +   GK +H  +       N  I N+L
Sbjct: 137 QESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGSIIVRNFLGNVFIWNAL 196

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
             +Y+KCG++ +A  +F  +  K+++VSW+ MIS Y   G+    I +  +M   G  P+
Sbjct: 197 TDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           +   S +I A                  +CG  D                      A +V
Sbjct: 256 QVTMSTIIAA----------------YCQCGRVD---------------------EARRV 278

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F +  EK+ V WT M+    + G   DA+ LF +M+L    PD +TLS VVS+C++L   
Sbjct: 279 FSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+ +H  +I  GL  ++ V  +L+DMY+KC   G +DD+R VF+ M   NV+SW A+I
Sbjct: 339 HHGQAVHGKSILAGLNNNLLVSSALIDMYSKC---GFIDDARSVFNLMPTRNVVSWNAMI 395

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE--QVYTHAVKR 417
            G  Q+ G DK+A++LF +M+Q +  P++ TF  +L AC   L  N  E  Q Y  ++  
Sbjct: 396 VGCAQN-GHDKDALELFENMLQQKFKPDNVTFIGILSAC---LHCNWIEQGQEYFDSITN 451

Query: 418 GRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN---LNSE 471
              +   + +   ++++  R+GR+E A    +++  + + + ++T++   +     +N+E
Sbjct: 452 QHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAE 511

Query: 472 KAFELLHEIEDT 483
            A   L E++ T
Sbjct: 512 VAARHLFELDPT 523



 Score =  150 bits (378), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 102/395 (25%), Positives = 184/395 (46%), Gaps = 72/395 (18%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG-------------RD- 369
           L+ +YAK    G + D++ +FD+ML  ++ SW A+++ Y +SG              RD 
Sbjct: 64  LLHLYAKF---GKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120

Query: 370 ----------------KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
                           +E+++LF  M +    P  +T  S+L A   L D    +Q++  
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQIHGS 180

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            + R    +  + N+L  MYA+ G +E AR  F+ L +KNLVS+N M+  YAKN   EK 
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             LLH++  +G      T ++                                   +I+ 
Sbjct: 241 IGLLHQMRLSGHMPDQVTMST-----------------------------------IIAA 265

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y +C  V+ A +VF E ++++++ WT+M+ G+AK+G    AL +F +ML + I+P+  T 
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325

Query: 594 IAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            +V+S+C+    +  G   H +S+    G+   +   + ++D+  + G + +A      M
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILA--GLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           P + +V+ W   +  C  +G  +      E +L+Q
Sbjct: 384 P-TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 194/413 (46%), Gaps = 69/413 (16%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE---PNS 113
           G +++A +  D +T+K    +L +++L++     ++N    K +  LL + +L    P+ 
Sbjct: 204 GEIEQARWLFDCLTKK----NLVSWNLMISG--YAKNGQPEKCI-GLLHQMRLSGHMPDQ 256

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           V ++++I+ Y +CG ++EA ++F     K DIV W++M+  Y   G++ DA+ +F EML 
Sbjct: 257 VTMSTIIAAYCQCGRVDEARRVFSEFKEK-DIVCWTAMMVGYAKNGREEDALLLFNEMLL 315

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
               P+ Y  S+V+ +C+   ++  G  ++G  +  G  ++++ V  ALIDM+ K G +D
Sbjct: 316 EHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG-LNNNLLVSSALIDMYSKCGFID 374

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
              A  VF+ M  +N V W  MI  C Q G  +DA+ LF +M+   F PD  T  G++SA
Sbjct: 375 --DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432

Query: 293 CSELELFTSGKQLH-SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           C           LH +W                            ++  ++ FD + + +
Sbjct: 433 C-----------LHCNW----------------------------IEQGQEYFDSITNQH 453

Query: 352 VMSWT----AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            M+ T    A +   +   GR ++AV L  +M      P+   ++++L  C    D   A
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLSICSTKGDIVNA 510

Query: 408 EQVYTHAVKRGRALDDCVGNSLI---SMYARSGRMEDARKAFESLFEKNLVSY 457
           E    H  +    LD  +    I   +MYA  GR +D       +  KN+  +
Sbjct: 511 EVAARHLFE----LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 129/264 (48%), Gaps = 36/264 (13%)

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK-----NLNS------ 470
           D  + N L+ +YA+ G++ DA+  F+ + ++++ S+N ++ AYAK     NL +      
Sbjct: 57  DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDIFSWNALLSAYAKSGSIQNLKATFDRMP 116

Query: 471 --------------------EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
                               +++ EL   ++  G   + YT  S+L+ ++ +  +  G+Q
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLSDLRYGKQ 176

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IH  II   F  N  I+NAL  MY++C  +E A  +F  +  +N++SW  MI+G+AK+G 
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             + + + ++M   G  P+ +T   +++A    G + E  + F S + E  IV     + 
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVF-SEFKEKDIVC----WT 291

Query: 631 CMVDLLGRSGSLTEALEFIRSMPL 654
            M+    ++G   +AL     M L
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLL 315



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 10/165 (6%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +  +GR + A+   + M  +   PD  T S ++ SC +  + H G+ VH     + L
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             N ++ ++LI +YSKCG +++A  +F  M   R++VSW++MI      G   DA+ +F 
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPT-RNVVSWNAMIVGCAQNGHDKDALELFE 412

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            ML+  F P+   F  ++ AC +   +  G           YFDS
Sbjct: 413 NMLQQKFKPDNVTFIGILSACLHCNWIEQGQ---------EYFDS 448


>gi|242076488|ref|XP_002448180.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
 gi|241939363|gb|EES12508.1| hypothetical protein SORBIDRAFT_06g022530 [Sorghum bicolor]
          Length = 1029

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 256/719 (35%), Positives = 420/719 (58%), Gaps = 13/719 (1%)

Query: 48   NRLIYHLNDGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
            N +I   +   ++  +F L   M ++G  P   T++ +L +      F  G+ +H+   +
Sbjct: 296  NAVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVK 355

Query: 107  SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
              L+ N  + +SLI+LY K G +++A K+F     +++IV W++M+  +V    Q + I 
Sbjct: 356  HGLDANVFVGSSLINLYVKHGCISDAKKVF-DFSTEKNIVMWNAMLYGFVQNDLQEETIQ 414

Query: 167  MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
            MF  M       +++ F +V+ AC N +++ IG  ++   +K    D+D+ V  A++DM+
Sbjct: 415  MFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIK-NSMDADLFVANAMLDMY 473

Query: 227  VK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
             K G++D+  A  +F  +  K++V W  +I          +A+ +   M   G  PD  +
Sbjct: 474  SKLGAIDVAKA--LFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVS 531

Query: 286  LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
             +  ++ACS +    +GKQ+H  +I+  +  +  VG SL+D+Y+K    G V+ SRKV  
Sbjct: 532  FATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKF---GDVESSRKVLA 588

Query: 346  RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
             +   +++   A+ITG VQ+  R+ EA++LF  +++    P++FTFAS+L  C   + S 
Sbjct: 589  HVDASSMVPINALITGLVQNN-REDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSV 647

Query: 406  VAEQVYTHAVKRGRA-LDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDA 463
            + +QV+++ +K      D  +G SL+ +Y +   +EDA K    + + KNLV +   +  
Sbjct: 648  IGKQVHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISG 707

Query: 464  YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
            YA+N  S+++  +   +    V +   TFAS+L   S I A+  G++IH  IIKSGF S 
Sbjct: 708  YAQNGYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSY 767

Query: 524  HCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKML 582
                +AL+ MYS+C +V ++F++FKE++++ N++ W SMI GFAK+G+A  AL +F KM 
Sbjct: 768  ETAASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQ 827

Query: 583  ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
               +KP+ +T + VL ACSHAGLISEG   F SM   +GIV R++HYAC++DLLGR G L
Sbjct: 828  ESQLKPDEVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGRGGHL 887

Query: 643  TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
             EA E I  +P  AD ++W TFL AC++H D E GK AA+ ++E +PQ  + ++ LS+L+
Sbjct: 888  QEAQEVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEMEPQRSSTYVFLSSLH 947

Query: 703  ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
            A+AG+W      R+ M+E+ ++K  GCSWI   NK + F V +T HP TL IY  LD L
Sbjct: 948  AAAGNWVEAKVAREAMREKGVMKFPGCSWITVGNKTNLFVVQDTHHPDTLGIYKMLDDL 1006



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 151/577 (26%), Positives = 304/577 (52%), Gaps = 15/577 (2%)

Query: 96  LGKLVHSLLTRSKLE-----PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
           +G+   +L   S++E     P+ V   ++IS  +  G L++A  + K +      V+W++
Sbjct: 239 VGRYQQALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRI-QMPSTVAWNA 297

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           +ISSY   G + +   ++ +M   G  P    F++++ A ++      G  I+   +K G
Sbjct: 298 VISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHG 357

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             D++V VG +LI+++VK    +  A KVFD  TEKN V W  M+    Q     + I++
Sbjct: 358 -LDANVFVGSSLINLYVKHGC-ISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQEETIQM 415

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M  +    D FT   V+ AC  L+    G+Q+H   I+  +  D+ V  +++DMY+K
Sbjct: 416 FQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDMYSK 475

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
               G++D ++ +F  +   + +SW A+I G   +   ++EAV +   M    +AP+  +
Sbjct: 476 L---GAIDVAKALFSLIPGKDSVSWNALIVGLAHN-EEEEEAVYMLKRMKCYGIAPDEVS 531

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FA+ + AC N+  +   +Q++  ++K     +  VG+SLI +Y++ G +E +RK    + 
Sbjct: 532 FATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVD 591

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
             ++V  N ++    +N   ++A EL  ++   G   S +TFAS+LSG +   +   G+Q
Sbjct: 592 ASSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQ 651

Query: 511 IHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISWTSMITGFAKH 568
           +H+  +KS     +  +  +L+ +Y +C  +E A ++  E+ D +N++ WT+ I+G+A++
Sbjct: 652 VHSYTLKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQN 711

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G++ ++L +F++M +  ++ +  T+ +VL ACS    +++G K    +  + G V     
Sbjct: 712 GYSDQSLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDG-KEIHGLIIKSGFVSYETA 770

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
            + ++D+  + G +  + E  + +    +++ W + +
Sbjct: 771 ASALMDMYSKCGDVISSFEIFKELKNKQNIMPWNSMI 807



 Score =  247 bits (631), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/529 (26%), Positives = 271/529 (51%), Gaps = 42/529 (7%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD    +++L +C R      G+ VH  + +S    ++     L+ +Y+KC ++ +A
Sbjct: 155 GGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCSSAFCQAGLVDMYAKCVEVKDA 214

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F  +    D + W+SMI+ Y   G+   A+ +F  M ++G  P++  +  +I   ++
Sbjct: 215 RRVFDGIACP-DTICWASMIAGYHRVGRYQQALALFSRMEKMGSAPDQVTYVTIISTLAS 273

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                                                   L  A  +  ++   +TV W 
Sbjct: 274 MGR-------------------------------------LSDARTLLKRIQMPSTVAWN 296

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I+  +Q G   +   L+ DM   G +P R T + ++SA + +  F  G+Q+H+ A++ 
Sbjct: 297 AVISSYSQSGLESEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKH 356

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           GL  +V VG SL+++Y K    G + D++KVFD   + N++ W A++ G+VQ+  ++ E 
Sbjct: 357 GLDANVFVGSSLINLYVK---HGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQE-ET 412

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +++F  M +  +  + FTF SVL AC NL   ++  QV+   +K     D  V N+++ M
Sbjct: 413 IQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHCITIKNSMDADLFVANAMLDM 472

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++ G ++ A+  F  +  K+ VS+N ++   A N   E+A  +L  ++  G+     +F
Sbjct: 473 YSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEEAVYMLKRMKCYGIAPDEVSF 532

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           A+ ++  S+I A   G+QIH   IK    SNH + ++LI +YS+  +VE++ +V   ++ 
Sbjct: 533 ATAINACSNIRATETGKQIHCASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDA 592

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            +++   ++ITG  ++     A+E+F ++L DG KP+  T+ ++LS C+
Sbjct: 593 SSMVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCT 641



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 125/509 (24%), Positives = 247/509 (48%), Gaps = 49/509 (9%)

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG----NKRDIVSWSSMISS 154
           ++H+ + R  L     + ++L+ LY + G +  A   ++++G          + SS++S 
Sbjct: 77  VLHARVLRLGLPLRGRLGDALVDLYGRSGRVGYA---WRALGCCTGAPASGAAASSVLSC 133

Query: 155 YVNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
           +   G   D +  F  +   +G  P+++  + V+ ACS    +  G  ++  +LK G+  
Sbjct: 134 HARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFCS 193

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           S  C    L+DM+ K  V+++ A +VFD +   +T+ W  MI    ++G  + A+ LF  
Sbjct: 194 SAFCQA-GLVDMYAK-CVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSR 251

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G  PD+ T   ++S  + +                                     
Sbjct: 252 MEKMGSAPDQVTYVTIISTLASM------------------------------------- 274

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G + D+R +  R+   + ++W A+I+ Y QS G + E   L+ DM +  + P   TFAS
Sbjct: 275 -GRLSDARTLLKRIQMPSTVAWNAVISSYSQS-GLESEVFGLYKDMKRQGLMPTRSTFAS 332

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           +L A  ++   +  +Q++  AVK G   +  VG+SLI++Y + G + DA+K F+   EKN
Sbjct: 333 MLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKN 392

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +V +N M+  + +N   E+  ++   +    +    +TF S+L    ++ ++  G Q+H 
Sbjct: 393 IVMWNAMLYGFVQNDLQEETIQMFQYMRRADLEADDFTFVSVLGACINLDSLDIGRQVHC 452

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
             IK+  +++  + NA++ MYS+   ++ A  +F  +  ++ +SW ++I G A +     
Sbjct: 453 ITIKNSMDADLFVANAMLDMYSKLGAIDVAKALFSLIPGKDSVSWNALIVGLAHNEEEEE 512

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A+ +  +M   GI P+ +++   ++ACS+
Sbjct: 513 AVYMLKRMKCYGIAPDEVSFATAINACSN 541



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 178/371 (47%), Gaps = 12/371 (3%)

Query: 45  PLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL 104
           P++  +   + + R  +AI     + + G  P   T++ +L  C    +  +GK VHS  
Sbjct: 597 PINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFASILSGCTGPVSSVIGKQVHSYT 656

Query: 105 TRSKLEPNSVILN-SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
            +S L      L  SL+ +Y KC  L +ANK+   + + +++V W++ IS Y   G    
Sbjct: 657 LKSALLNQDTSLGISLVGIYLKCKLLEDANKLLAEVPDHKNLVEWTATISGYAQNGYSDQ 716

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           ++ MF  M       +E  F++V++ACS    +  G  I+G ++K G+   +     AL+
Sbjct: 717 SLVMFWRMRSHDVRSDEATFASVLKACSEIAALTDGKEIHGLIIKSGFVSYET-AASALM 775

Query: 224 DMFVKGSVDLESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           DM+ K   D+ S++++F ++  K N + W  MI    + G   +A+ LF  M  S   PD
Sbjct: 776 DMYSKCG-DVISSFEIFKELKNKQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQLKPD 834

Query: 283 RFTLSGVVSACSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
             TL GV+ ACS   L + G+ L  S +   G+   V     L+D+  +    G + +++
Sbjct: 835 EVTLLGVLIACSHAGLISEGRNLFDSMSQVYGIVPRVDHYACLIDLLGR---GGHLQEAQ 891

Query: 342 KVFDRM-LDHNVMSWTAIITG--YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           +V D++    + + W   +      +   R K A K   +M + Q +  +   +S+  A 
Sbjct: 892 EVIDQLPFRADGVIWATFLAACQMHKDEERGKVAAKKLVEM-EPQRSSTYVFLSSLHAAA 950

Query: 399 GNLLDSNVAEQ 409
           GN +++ VA +
Sbjct: 951 GNWVEAKVARE 961



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 112/217 (51%), Gaps = 12/217 (5%)

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE--SLFEKN 453
           +ACG L         +   ++ G  L   +G++L+ +Y RSGR+  A +A    +    +
Sbjct: 73  RACGVL---------HARVLRLGLPLRGRLGDALVDLYGRSGRVGYAWRALGCCTGAPAS 123

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIH 512
             + ++++  +A++ +     +    +  +  GT   +  A +LS  S +GA+ +G Q+H
Sbjct: 124 GAAASSVLSCHARSGSPRDVLDAFQRLRCSIGGTPDQFGLAVVLSACSRLGALEQGRQVH 183

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
             ++KSGF S+      L+ MY++C  V+ A +VF  +   + I W SMI G+ + G   
Sbjct: 184 CDVLKSGFCSSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQ 243

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           +AL +F +M   G  P+ +TY+ ++S  +  G +S+ 
Sbjct: 244 QALALFSRMEKMGSAPDQVTYVTIISTLASMGRLSDA 280



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 83/383 (21%), Positives = 168/383 (43%), Gaps = 19/383 (4%)

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLDHNVMSWTAIITGY 362
           LH+  +R GL L   +G +LVD+Y +    G V  + +          +  + +++++ +
Sbjct: 78  LHARVLRLGLPLRGRLGDALVDLYGR---SGRVGYAWRALGCCTGAPASGAAASSVLSCH 134

Query: 363 VQSGG-RDK-EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            +SG  RD  +A +     I G   P+ F  A VL AC  L       QV+   +K G  
Sbjct: 135 ARSGSPRDVLDAFQRLRCSIGG--TPDQFGLAVVLSACSRLGALEQGRQVHCDVLKSGFC 192

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                   L+ MYA+   ++DAR+ F+ +   + + + +M+  Y +    ++A  L   +
Sbjct: 193 SSAFCQAGLVDMYAKCVEVKDARRVFDGIACPDTICWASMIAGYHRVGRYQQALALFSRM 252

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           E  G      T+ +++S  +S+G +     +  RI       +   +NA+IS YS+    
Sbjct: 253 EKMGSAPDQVTYVTIISTLASMGRLSDARTLLKRIQM----PSTVAWNAVISSYSQSGLE 308

Query: 541 EAAFQVFKEMEDRNVI----SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
              F ++K+M+ + ++    ++ SM++  A         +I    +  G+  N     ++
Sbjct: 309 SEVFGLYKDMKRQGLMPTRSTFASMLSAAASMTAFDEGQQIHAAAVKHGLDANVFVGSSL 368

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           ++     G IS+  K F    +++ ++     Y  + + L       +  +++R   L A
Sbjct: 369 INLYVKHGCISDAKKVFDFSTEKNIVMWNAMLYGFVQNDLQE--ETIQMFQYMRRADLEA 426

Query: 657 DVLVWRTFLGACRVHGDTELGKH 679
           D   + + LGAC      ++G+ 
Sbjct: 427 DDFTFVSVLGACINLDSLDIGRQ 449


>gi|255586261|ref|XP_002533783.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526284|gb|EEF28596.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 672

 Score =  458 bits (1178), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 240/663 (36%), Positives = 397/663 (59%), Gaps = 7/663 (1%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SLI LY++ G + +A ++F  M NK D V W+ M++ +V  G+   A+ +F +M     
Sbjct: 11  SSLIKLYAENGCIEDARRLFDKMPNK-DCVLWNVMLNGFVKCGEPNSAVKVFEDMRNCQT 69

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F++V+  C++      G+ ++G ++ CG F  D  V  AL+ M+ K    L  A
Sbjct: 70  KPNSITFASVLSICASEALSEFGNQLHGLVISCG-FHFDPLVANALVAMYSKFG-QLSDA 127

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+F+ M + N V W  MI    Q G   +A  LF +MI +G  PD  T +  + + +E 
Sbjct: 128 LKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTES 187

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GK++H + +R G+ALDV +  +L+D+Y KC     V  + K+F +  + +++  T
Sbjct: 188 ASLKQGKEIHGYILRHGIALDVFLKSALIDIYFKCR---DVGMACKIFKQSTNVDIVVCT 244

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           AII+GYV +G  + +A+++F  +++ +++PN  T ASVL AC  L   N+ ++++ + +K
Sbjct: 245 AIISGYVLNG-LNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILK 303

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G      VG++++ MYA+ GR++ A + F  + EK+ V +N ++   ++N   ++A +L
Sbjct: 304 HGLDERRHVGSAIMDMYAKCGRLDLAYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDL 363

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             ++   G+     + ++ LS  +++ A+  G+ IH+ +IK  F+S     +ALI MY +
Sbjct: 364 FRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGK 423

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C N+  A  VF  M ++N +SW S+I  +  HG    +L +F+KML DGI+P+ +T++ +
Sbjct: 424 CGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLALFHKMLEDGIQPDHVTFLTI 483

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           LSAC HAG + +G ++FR M +E+GI  RMEHYAC+VDL GR+G L EA E I++MP S 
Sbjct: 484 LSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFETIKNMPFSP 543

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  VW T LGACRVHG+ EL + A+  +L+ DP++   ++LLSN++A AG W  V  IR 
Sbjct: 544 DDGVWGTLLGACRVHGNVELAEVASRCLLDLDPENSGCYVLLSNVHADAGQWGSVRKIRS 603

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            MK+R + K  G SWIE +   H F   + SHP++ +IY+ L+ L L++++ GY P    
Sbjct: 604 LMKKRGVQKVPGYSWIEVNKTTHMFVAADGSHPESAQIYSVLNNLLLELRKEGYCPKPYL 663

Query: 777 VLH 779
            +H
Sbjct: 664 PMH 666



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 157/581 (27%), Positives = 292/581 (50%), Gaps = 22/581 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G    A+   + M      P+  T++ +L  C        G  +H L+       + ++ 
Sbjct: 52  GEPNSAVKVFEDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVA 111

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+++YSK G L++A K+F +M +  ++V+W+ MI+ +V  G   +A  +F EM+  G 
Sbjct: 112 NALVAMYSKFGQLSDALKLFNTMPDT-NVVTWNGMIAGFVQNGFMDEASLLFSEMISAGV 170

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+   F++ + + + + ++  G  I+G++L+ G    DV +  ALID++ K   D+  A
Sbjct: 171 SPDSITFASFLPSVTESASLKQGKEIHGYILRHG-IALDVFLKSALIDIYFK-CRDVGMA 228

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+F + T  + V  T +I+     G   DA+ +F  ++     P+  TL+ V+ AC+ L
Sbjct: 229 CKIFKQSTNVDIVVCTAIISGYVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGL 288

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GK+LH+  ++ GL     VG +++DMYAKC   G +D + ++F RM + + + W 
Sbjct: 289 ATLNLGKELHANILKHGLDERRHVGSAIMDMYAKC---GRLDLAYQIFRRMPEKDAVCWN 345

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           AIIT   Q+ G+ +EA+ LF  M +  ++ +  + ++ L AC NL   +  + +++  +K
Sbjct: 346 AIITNCSQN-GKPQEAIDLFRQMGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIK 404

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                +    ++LI MY + G +  AR  F+ + EKN VS+N+++ AY  + + E +  L
Sbjct: 405 GAFDSEVFAESALIDMYGKCGNLSVARCVFDMMREKNEVSWNSIIAAYGSHGHLEVSLAL 464

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYS 535
            H++ + G+     TF ++LS     G + KG Q    + +  G  +    Y  ++ ++ 
Sbjct: 465 FHKMLEDGIQPDHVTFLTILSACGHAGQVDKGIQYFRCMTEEYGIPARMEHYACIVDLFG 524

Query: 536 RCANVEAAFQVFKEM---EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           R   +  AF+  K M    D  V  W +++     HG    A E+  + L D    N   
Sbjct: 525 RAGRLNEAFETIKNMPFSPDDGV--WGTLLGACRVHGNVELA-EVASRCLLDLDPENSGC 581

Query: 593 YIAVLSACSHAGLISEGW---KHFRSMYDEHGIVQRMEHYA 630
           Y+ + +  + AG     W   +  RS+  + G VQ++  Y+
Sbjct: 582 YVLLSNVHADAG----QWGSVRKIRSLMKKRG-VQKVPGYS 617



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 232/449 (51%), Gaps = 26/449 (5%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P T+    N +I   + +G + +A      M   G  PD  T++  L S   S + 
Sbjct: 131 FNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFLPSVTESASL 190

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             GK +H  + R  +  +  + ++LI +Y KC D+  A KIFK   N  DIV  +++IS 
Sbjct: 191 KQGKEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQSTNV-DIVVCTAIISG 249

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YV  G   DA+ +F  +LE    PN    ++V+ AC+    + +G  ++  +LK G  D 
Sbjct: 250 YVLNGLNNDALEIFRWLLEEKMSPNAVTLASVLPACAGLATLNLGKELHANILKHG-LDE 308

Query: 215 DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
              VG A++DM+ K G +DL  AY++F +M EK+ V W  +IT C+Q G P++AI LF  
Sbjct: 309 RRHVGSAIMDMYAKCGRLDL--AYQIFRRMPEKDAVCWNAIITNCSQNGKPQEAIDLFRQ 366

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G   D  ++S  +SAC+ L     GK +HS+ I+     +V    +L+DMY KC  
Sbjct: 367 MGREGLSYDCVSISAALSACANLPALHHGKAIHSFMIKGAFDSEVFAESALIDMYGKC-- 424

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G++  +R VFD M + N +SW +II  Y  S G  + ++ LF  M++  + P+H TF +
Sbjct: 425 -GNLSVARCVFDMMREKNEVSWNSIIAAY-GSHGHLEVSLALFHKMLEDGIQPDHVTFLT 482

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--------NSLISMYARSGRMEDARKA 445
           +L ACG+      A QV    ++  R + +  G          ++ ++ R+GR+ +A + 
Sbjct: 483 ILSACGH------AGQV-DKGIQYFRCMTEEYGIPARMEHYACIVDLFGRAGRLNEAFET 535

Query: 446 FESL-FEKNLVSYNTMVDAYAKNLNSEKA 473
            +++ F  +   + T++ A   + N E A
Sbjct: 536 IKNMPFSPDDGVWGTLLGACRVHGNVELA 564



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 178/362 (49%), Gaps = 23/362 (6%)

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G  +D+ VG+SLI +YA +G +EDAR+ F+ +  K+ V +N M++ + K      A ++ 
Sbjct: 2   GFNVDEFVGSSLIKLYAENGCIEDARRLFDKMPNKDCVLWNVMLNGFVKCGEPNSAVKVF 61

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            ++ +     ++ TFAS+LS  +S      G Q+H  +I  GF  +  + NAL++MYS+ 
Sbjct: 62  EDMRNCQTKPNSITFASVLSICASEALSEFGNQLHGLVISCGFHFDPLVANALVAMYSKF 121

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             +  A ++F  M D NV++W  MI GF ++GF   A  +F +M++ G+ P+ IT+ + L
Sbjct: 122 GQLSDALKLFNTMPDTNVVTWNGMIAGFVQNGFMDEASLLFSEMISAGVSPDSITFASFL 181

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
            + + +  + +G K        HGI   +   + ++D+  +   +  A +  +    + D
Sbjct: 182 PSVTESASLKQG-KEIHGYILRHGIALDVFLKSALIDIYFKCRDVGMACKIFKQ-STNVD 239

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
           ++V    +    ++G   L   A E+   L ++   P A  L S L A AG         
Sbjct: 240 IVVCTAIISGYVLNG---LNNDALEIFRWLLEEKMSPNAVTLASVLPACAG--------- 287

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             +   NL KE   + I       + HVG       +++YA+  +L L  + F  +P+ +
Sbjct: 288 --LATLNLGKELHAN-ILKHGLDERRHVGSA----IMDMYAKCGRLDLAYQIFRRMPEKD 340

Query: 776 FV 777
            V
Sbjct: 341 AV 342


>gi|224129792|ref|XP_002320672.1| predicted protein [Populus trichocarpa]
 gi|222861445|gb|EEE98987.1| predicted protein [Populus trichocarpa]
          Length = 720

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 249/650 (38%), Positives = 385/650 (59%), Gaps = 17/650 (2%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           ALI  + K S+ +  A+ +FD++ + + V +  +I      G    A+ LF +M   G +
Sbjct: 79  ALIAAYAKESL-IHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV 137

Query: 281 PDRFTLSGVVSAC-SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            D FT SGV++AC + + L    +QLHS A  +G    V V  SL+  Y+K   +G +++
Sbjct: 138 MDGFTFSGVITACCNHVGLI---RQLHSLAFSSGFDSYVSVKNSLLTYYSK---NGILEE 191

Query: 340 SRKVFDRMLDH--NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +  VF+ M +   + +SW ++I  Y Q   R  +A+ L+ DM+      + FT ASVL  
Sbjct: 192 AEMVFNGMGEEVRDEVSWNSMIVAYGQHK-RGLKALALYRDMVHRGFEIDMFTLASVLTT 250

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR-MEDARKAFESLFEKNLVS 456
              + D +   Q +  A+K G   +  VG+ LI MYA+ G  M ++RK FE +   +LV 
Sbjct: 251 FSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEICGSDLVV 310

Query: 457 YNTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           +NTM+  Y++N   S +A E   +++  G      +F   +S  S++ +  +G+Q HA  
Sbjct: 311 WNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPSQGKQFHALA 370

Query: 516 IKSGFESNH-CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           +KS   SN   + NAL++MYS+C N++ A ++F+ M   N ++  S+I G+A+HG    +
Sbjct: 371 MKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGYAQHGIGTES 430

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L +F +MLA  I P  IT +++LSAC+H G + EG K+F  M D  GI    EHY+CM+D
Sbjct: 431 LNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKKYFNMMKDIFGIEPEAEHYSCMID 490

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LLGR+G L+EA   I +MP S     W   LGACR +G+ EL + AA   L+ +P +   
Sbjct: 491 LLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAANQFLQLEPTNAVP 550

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           +I+L+++Y++A  WE  A IRK M++R + K+ GCSWIE + +VH F   + SHP+  EI
Sbjct: 551 YIMLASMYSAARKWEEAARIRKLMRDRGIRKKPGCSWIELNKRVHVFVAEDNSHPRIKEI 610

Query: 755 YAELDQLALKIKEFGYLPDTNFVL---HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
           +  LD++ +K+K  GY+PD  +      E  E++K   L  HSEK+AVAFGL+ T   +P
Sbjct: 611 HMYLDEMFVKMKRAGYVPDVRWAFVKDDETGEQEKEIMLAHHSEKLAVAFGLLFTKHGEP 670

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + V KNLR+CGDCH AIK++S +  R+I +RD+ RFH  +DG+CSC DYW
Sbjct: 671 LLVVKNLRICGDCHNAIKFMSAIARRKITVRDAYRFHCFEDGRCSCGDYW 720



 Score =  220 bits (560), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 162/590 (27%), Positives = 291/590 (49%), Gaps = 57/590 (9%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L ++  +LKSCI +++   GK +H++  +S +  ++ + N  I LYSKC  L  A+  F 
Sbjct: 8   LQSFRQILKSCIANKDLLTGKSLHTIYLKSLIPSSTYLSNHFILLYSKCNLLTTAHHAFN 67

Query: 138 SMGN------------------------------KRDIVSWSSMISSYVNRGKQVDAIHM 167
                                             + D+VS++++I++Y +RG  + A+ +
Sbjct: 68  QTHEPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSL 127

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F EM E+G   + + FS VI AC N  +V +   ++      G FDS V V  +L+  + 
Sbjct: 128 FGEMREMGLVMDGFTFSGVITACCN--HVGLIRQLHSLAFSSG-FDSYVSVKNSLLTYYS 184

Query: 228 KGSVDLESAYKVFDKMTE--KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           K  + LE A  VF+ M E  ++ V W  MI    Q      A+ L+ DM+  GF  D FT
Sbjct: 185 KNGI-LEEAEMVFNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFT 243

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L+ V++  S +E  + G Q H+ AI+TG   +  VG  L+DMYAKC     + +SRKVF+
Sbjct: 244 LASVLTTFSCVEDLSGGLQFHAKAIKTGFNKNRHVGSGLIDMYAKC--GAGMSESRKVFE 301

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            +   +++ W  +I+GY Q+     EA++ F  M +    P+  +F   + AC NL   +
Sbjct: 302 EICGSDLVVWNTMISGYSQNKELSVEALECFRQMQRAGYWPDDCSFVCAISACSNLSSPS 361

Query: 406 VAEQVYTHAVKRGRALDD-CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
             +Q +  A+K     +   V N+L++MY++ G ++DARK F+ + + N V+ N+++  Y
Sbjct: 362 QGKQFHALAMKSEIPSNQISVNNALVTMYSKCGNLQDARKLFQRMPQHNTVTLNSIIAGY 421

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF---- 520
           A++    ++  L  ++    +  ++ T  S+LS  +  G + +G++ +  ++K  F    
Sbjct: 422 AQHGIGTESLNLFEQMLAASIAPTSITLVSILSACAHTGRVEEGKK-YFNMMKDIFGIEP 480

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALE 576
           E+ H  Y+ +I +  R   +  A ++   M       +W +++    K+G    A +A  
Sbjct: 481 EAEH--YSCMIDLLGRAGKLSEAERLIDTMPFSPGSAAWAALLGACRKYGNMELAEKAAN 538

Query: 577 IFYKMLADGIKP-NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            F ++     +P N + YI + S  S A    E  +  R +  + GI ++
Sbjct: 539 QFLQL-----EPTNAVPYIMLASMYSAARKWEEAAR-IRKLMRDRGIRKK 582



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/242 (26%), Positives = 129/242 (53%), Gaps = 7/242 (2%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+LI+ YA+   +  A   F+ + + +LVS+NT+++AYA   ++  A  L  E+ + G+ 
Sbjct: 78  NALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGEMREMGLV 137

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              +TF+ +++   +   +G   Q+H+    SGF+S   + N+L++ YS+   +E A  V
Sbjct: 138 MDGFTFSGVITACCN--HVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILEEAEMV 195

Query: 547 FKEM--EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           F  M  E R+ +SW SMI  + +H    +AL ++  M+  G + +  T  +VL+  S   
Sbjct: 196 FNGMGEEVRDEVSWNSMIVAYGQHKRGLKALALYRDMVHRGFEIDMFTLASVLTTFSCVE 255

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS-LTEALEFIRSMPLSADVLVWRT 663
            +S G + F +   + G  +     + ++D+  + G+ ++E+ +    +   +D++VW T
Sbjct: 256 DLSGGLQ-FHAKAIKTGFNKNRHVGSGLIDMYAKCGAGMSESRKVFEEI-CGSDLVVWNT 313

Query: 664 FL 665
            +
Sbjct: 314 MI 315



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 65/123 (52%), Gaps = 16/123 (13%)

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
           E N   +NALI+ Y++ + +  A  +F ++   +++S+ ++I  +A  G    AL +F +
Sbjct: 71  EPNVFSFNALIAAYAKESLIHVAHHLFDQIPQPDLVSFNTLINAYADRGDTLSALSLFGE 130

Query: 581 MLADGIKPNGITYIAVLSA-CSHAGLI--------SEGWKHFRSM-------YDEHGIVQ 624
           M   G+  +G T+  V++A C+H GLI        S G+  + S+       Y ++GI++
Sbjct: 131 MREMGLVMDGFTFSGVITACCNHVGLIRQLHSLAFSSGFDSYVSVKNSLLTYYSKNGILE 190

Query: 625 RME 627
             E
Sbjct: 191 EAE 193


>gi|212274935|ref|NP_001130299.1| uncharacterized protein LOC100191393 [Zea mays]
 gi|194688780|gb|ACF78474.1| unknown [Zea mays]
 gi|414586171|tpg|DAA36742.1| TPA: hypothetical protein ZEAMMB73_518704 [Zea mays]
          Length = 695

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 253/697 (36%), Positives = 395/697 (56%), Gaps = 26/697 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
            + ++RA + + ++  G  ++G + K G F SD  +G  LIDM+VK G +DL  A +VF 
Sbjct: 7   IAGLLRASARSSSLRGGVQLHGAITKMG-FGSDTMLGNNLIDMYVKCGELDL--ACEVFG 63

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFT 300
            M ++N V WT ++    + G     +RL  +M   S   P+ +TLS  + AC  +    
Sbjct: 64  GMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTA 123

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAII 359
           +G  +H   +R G      V  SLV +Y+K    G + D+R+VFD   L   + +W A++
Sbjct: 124 AGVGIHGLCVRAGYQEHDVVASSLVLVYSK---GGRIGDARRVFDGAGLGSGIATWNAMV 180

Query: 360 TGYVQSG-GRDKEAVKLFSDMI--QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           +GY  +G GRD  A+ +F +M   +GQ  P+ FTFAS+LKAC  L  +    QV+     
Sbjct: 181 SGYAHAGHGRD--ALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTA 238

Query: 417 RG--RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
            G   A +  +  +L+ MY +  R+  A + FE L  KN++ +  +V  +A+     +A 
Sbjct: 239 SGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQWTAVVVGHAQEGQVTEAL 298

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           EL      +G    ++  +S++   +    + +G Q+H   IK    ++    N+++ MY
Sbjct: 299 ELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMY 358

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C   + A ++F+EM   NV+SWT+M+ G  KHG    A+ +F +M A G++P+ +TY+
Sbjct: 359 LKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYL 418

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           A+LSACSHAGL+ E  ++F  +  +  +  + EHYACMVDLLGR+G L EA + IR+MP+
Sbjct: 419 ALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLLGRAGELREARDLIRTMPM 478

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
              V VW+T L ACRVH D  +G+ A +++L  D  +P  ++ LSN+ A AG W     +
Sbjct: 479 EPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYVTLSNVLAEAGEWRECHKV 538

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVG---ETSHPKTLEIYAELDQLALKIKE-FGY 770
           R  M+ R L K+ GCSW+E   +VH F+ G   E +HP+  +I   L  +  +++E  GY
Sbjct: 539 RDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGDIRRVLRDMETRMREQLGY 598

Query: 771 -LPDTNFVLHELEEEQKVQYLFQHSEKIAVAF-----GLISTSKSKPIRVFKNLRVCGDC 824
              D  F LH+++EE + + L  HSE++AV       G+      +PIRV+KNLRVCGDC
Sbjct: 599 NADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGGGHGEPIRVYKNLRVCGDC 658

Query: 825 HTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           H   K +S V  R +V+RD+NRFH  + G CSC DYW
Sbjct: 659 HEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 695



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 144/534 (26%), Positives = 257/534 (48%), Gaps = 26/534 (4%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL++  RS +   G  +H  +T+     ++++ N+LI +Y KCG+L+ A ++F  M   R
Sbjct: 10  LLRASARSSSLRGGVQLHGAITKMGFGSDTMLGNNLIDMYVKCGELDLACEVFGGM-RDR 68

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHII 202
           ++VSW++++  ++  G     + +  EM       PNEY  SA ++AC    + A G  I
Sbjct: 69  NVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNEYTLSASLKACCVVGDTAAGVGI 128

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRCTQL 261
           +G  ++ GY + DV V  +L+ ++ KG   +  A +VFD     + +  W  M++     
Sbjct: 129 HGLCVRAGYQEHDV-VASSLVLVYSKGG-RIGDARRVFDGAGLGSGIATWNAMVSGYAHA 186

Query: 262 GCPRDAIRLFLDMIL--SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL--ALD 317
           G  RDA+ +F +M        PD FT + ++ ACS L     G Q+H+    +G   A +
Sbjct: 187 GHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFSTASN 246

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             +  +LVDMY KC     +  + +VF+R+   NV+ WTA++ G+ Q  G+  EA++LF 
Sbjct: 247 AILAGALVDMYVKCR---RLPVAMQVFERLERKNVIQWTAVVVGHAQE-GQVTEALELFR 302

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
              +    P+    +SV+    +        QV+ + +K     D   GNS++ MY + G
Sbjct: 303 RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIKDPTGTDVSAGNSIVDMYLKCG 362

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
             ++A + F  +   N+VS+ TMV+   K+    +A  L  E+   GV     T+ +LLS
Sbjct: 363 LPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLALLS 422

Query: 498 GASSIGAIGKGEQIHA-----RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME- 551
             S  G + +  +  +     R ++   E     Y  ++ +  R   +  A  + + M  
Sbjct: 423 ACSHAGLVDECRRYFSCIRRDRTVRPKAEH----YACMVDLLGRAGELREARDLIRTMPM 478

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAG 604
           +  V  W ++++    H   A   E    +LA DG  P  + Y+ + +  + AG
Sbjct: 479 EPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNP--VNYVTLSNVLAEAG 530



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 207/405 (51%), Gaps = 16/405 (3%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++ T     P+  T S  LK+C    +   G  +H L  R+  + + V+ +SL+ +YSK 
Sbjct: 95  EMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKG 154

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCFS 184
           G + +A ++F   G    I +W++M+S Y + G   DA+ +F EM   E    P+E+ F+
Sbjct: 155 GRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFA 214

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFD-SDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           ++++ACS       G  ++  +   G+   S+  +  AL+DM+VK    L  A +VF+++
Sbjct: 215 SLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVK-CRRLPVAMQVFERL 273

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
             KN + WT ++    Q G   +A+ LF     SG  PD   LS VV   ++  L   G+
Sbjct: 274 ERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGR 333

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H + I+     DV  G S+VDMY KC   G  D++ ++F  M   NV+SWT ++ G  
Sbjct: 334 QVHCYGIKDPTGTDVSAGNSIVDMYLKC---GLPDEAERMFREMRAPNVVSWTTMVNGLG 390

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRAL 421
           +  G  +EAV LF +M  G V P+  T+ ++L AC    L+D     + Y   ++R R +
Sbjct: 391 KH-GLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDEC---RRYFSCIRRDRTV 446

Query: 422 DDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
                +   ++ +  R+G + +AR    ++  E  +  + T++ A
Sbjct: 447 RPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA 491



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 67/249 (26%), Positives = 127/249 (51%), Gaps = 7/249 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNH-PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE- 110
           H   GR    +F  ++   +G H PD  T++ LLK+C        G  VH+ +T S    
Sbjct: 185 HAGHGRDALLVFR-EMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFST 243

Query: 111 -PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             N+++  +L+ +Y KC  L  A ++F+ +  +++++ W++++  +   G+  +A+ +F 
Sbjct: 244 ASNAILAGALVDMYVKCRRLPVAMQVFERL-ERKNVIQWTAVVVGHAQEGQVTEALELFR 302

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
                G  P+ +  S+V+   ++   V  G  ++ + +K     +DV  G +++DM++K 
Sbjct: 303 RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK-DPTGTDVSAGNSIVDMYLKC 361

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            +  E A ++F +M   N V WT M+    + G  R+A+ LF +M   G  PD  T   +
Sbjct: 362 GLPDE-AERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLAL 420

Query: 290 VSACSELEL 298
           +SACS   L
Sbjct: 421 LSACSHAGL 429


>gi|222637368|gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 241/695 (34%), Positives = 382/695 (54%), Gaps = 70/695 (10%)

Query: 233 LESAYKVFDKM--TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGV 289
           L  A   FD +    ++TV    M++   +      A+ +F  ++ SG L PD ++ + +
Sbjct: 108 LRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSGSLRPDDYSFTAL 167

Query: 290 VSACSELELFTSG--KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           +SA  ++    +    QLH   +++G A  + V  +L+ +Y KC    +  D+RKV D M
Sbjct: 168 ISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPEASWDARKVLDEM 227

Query: 348 LDHNVMSWTAIITGYVQSG------------------------------GRDKEAVKLFS 377
            D + ++WT ++ GYV+ G                              G   +A +LF 
Sbjct: 228 PDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCADAFELFR 287

Query: 378 DMIQGQVAPNHFTFASVLKACGN----LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            M+  +V  + FTF SVL AC N    +   +V  Q+              V N+L+++Y
Sbjct: 288 RMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEAALPVNNALVTLY 347

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNT-------------------------------MVD 462
           ++ G++  A++ F+++  K++VS+NT                               MV 
Sbjct: 348 SKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVS 407

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            Y     SE A +L +++    V    YT+A  ++    +GA+  G Q+HA +++ GFE+
Sbjct: 408 GYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEA 467

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
           ++   NAL++MY++C  V  A  VF  M + + +SW +MI+   +HG    ALE+F +M+
Sbjct: 468 SNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISALGQHGHGREALELFDQMV 527

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           A+GI P+ I+++ +L+AC+HAGL+ EG+ +F SM  + GI    +HYA ++DLLGRSG +
Sbjct: 528 AEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISPGEDHYARLIDLLGRSGRI 587

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            EA + I++MP      +W   L  CR +GD E G +AA+ +    PQ    +ILLSN Y
Sbjct: 588 GEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQLFRMIPQHDGTYILLSNTY 647

Query: 703 ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
           ++AG W   A +RK M++R + KE GCSWIE  +K+H F VG+T HP+  E+Y  L+ + 
Sbjct: 648 SAAGRWVDAARVRKLMRDRGVKKEPGCSWIEVGSKIHVFLVGDTKHPEAQEVYQFLEVIG 707

Query: 763 LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
            ++++ GY+PDT FVLH++E  +K   LF HSEK+AV FGL+       + V KNLR+CG
Sbjct: 708 ARMRKLGYVPDTKFVLHDMEPHEKEYILFAHSEKLAVGFGLLKLPPGATVTVLKNLRICG 767

Query: 823 DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           DCHTA+ ++S   GREIV+RD  RFHH KDG+CSC
Sbjct: 768 DCHTAMMFMSKAVGREIVVRDVRRFHHFKDGECSC 802



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 244/566 (43%), Gaps = 88/566 (15%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            SL++  +  G L +A   F ++   +RD V  ++M+S++        A+ +F  +L  G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 176 -FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD----VCVGCALIDMFVK-- 228
              P++Y F+A+I A     N+A  H      L C    S     + V  ALI +++K  
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQ---LHCSVLKSGAAAVLSVSNALIALYMKCD 212

Query: 229 ----------------------------GSV---DLESAYKVFDKMTEKNTVGWTLMITR 257
                                       G V   D+ +A  VF+++  K  V W  MI+ 
Sbjct: 213 TPEASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISG 272

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL- 316
             Q G   DA  LF  M+      D FT + V+SAC+    F  GK +H   IR      
Sbjct: 273 YVQSGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFV 332

Query: 317 ---DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK--- 370
               + V  +LV +Y+K    G +  ++++FD M   +V+SW  I++GY+ SG  DK   
Sbjct: 333 PEAALPVNNALVTLYSK---GGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVE 389

Query: 371 ---------------------------EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
                                      +A+KLF+ M    V P  +T+A  + ACG L  
Sbjct: 390 VFKVMPYKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGA 449

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
                Q++ H V+ G    +  GN+L++MYA+ G + DAR  F  +   + VS+N M+ A
Sbjct: 450 LKHGRQLHAHLVQCGFEASNSAGNALLTMYAKCGAVNDARLVFLVMPNLDSVSWNAMISA 509

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFES 522
             ++ +  +A EL  ++   G+     +F ++L+  +  G + +G      + +  G   
Sbjct: 510 LGQHGHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFHYFESMKRDFGISP 569

Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG---FAARALEIF 578
               Y  LI +  R   +  A  + K M      S W ++++G   +G   F A A +  
Sbjct: 570 GEDHYARLIDLLGRSGRIGEARDLIKTMPFEPTPSIWEAILSGCRTNGDMEFGAYAADQL 629

Query: 579 YKMLADGIKPNGITYIAVLSACSHAG 604
           ++M    I  +  TYI + +  S AG
Sbjct: 630 FRM----IPQHDGTYILLSNTYSAAG 651



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 202/449 (44%), Gaps = 85/449 (18%)

Query: 76  PDLDTYSLLLKSCIRSRNF---HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           PD  +++ L+ +  +  N    H  +L H  + +S       + N+LI+LY KC D  EA
Sbjct: 159 PDDYSFTALISAVGQMHNLAAPHCTQL-HCSVLKSGAAAVLSVSNALIALYMKC-DTPEA 216

Query: 133 N----KIFKSMGNKRDIVSWSSMISSYVNRGKQ--------------------------- 161
           +    K+   M +K D+ +W++M+  YV RG                             
Sbjct: 217 SWDARKVLDEMPDKDDL-TWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 162 ----VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG---YFDS 214
                DA  +F  M+      +E+ F++V+ AC+N      G  ++G +++       ++
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGFFVHGKSVHGQIIRLQPNFVPEA 335

Query: 215 DVCVGCALIDMFVKGS---------------------------VD---LESAYKVFDKMT 244
            + V  AL+ ++ KG                            +D   L+ A +VF  M 
Sbjct: 336 ALPVNNALVTLYSKGGKIVIAKRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMP 395

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            KN + W +M++     G   DA++LF  M      P  +T +G ++AC EL     G+Q
Sbjct: 396 YKNDLSWMVMVSGYVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQ 455

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH+  ++ G       G +L+ MYAKC   G+V+D+R VF  M + + +SW A+I+   Q
Sbjct: 456 LHAHLVQCGFEASNSAGNALLTMYAKC---GAVNDARLVFLVMPNLDSVSWNAMISALGQ 512

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALD 422
             G  +EA++LF  M+   + P+  +F ++L AC    L+D       Y  ++KR   + 
Sbjct: 513 H-GHGREALELFDQMVAEGIDPDRISFLTILTACNHAGLVDEGFH---YFESMKRDFGIS 568

Query: 423 DCVGN--SLISMYARSGRMEDARKAFESL 449
               +   LI +  RSGR+ +AR   +++
Sbjct: 569 PGEDHYARLIDLLGRSGRIGEARDLIKTM 597



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 136/288 (47%), Gaps = 57/288 (19%)

Query: 427 NSLISMYARSGRMEDARKAFESL--FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
            SL++  A +GR+ DA   F+++    ++ V +N M+ A+A+   +  A  + H +  +G
Sbjct: 96  TSLVAAQAAAGRLRDAAAFFDAVPPARRDTVLHNAMMSAFARASLAAPAVSVFHALLGSG 155

Query: 485 -VGTSAYTFASLLSGASSIGAIGKGE--QIHARIIKSGFESNHCIYNALISMYSRCANVE 541
            +    Y+F +L+S    +  +      Q+H  ++KSG  +   + NALI++Y +C   E
Sbjct: 156 SLRPDDYSFTALISAVGQMHNLAAPHCTQLHCSVLKSGAAAVLSVSNALIALYMKCDTPE 215

Query: 542 AAF---QVFKEMEDRNVISWTS-------------------------------MITGFAK 567
           A++   +V  EM D++ ++WT+                               MI+G+ +
Sbjct: 216 ASWDARKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQ 275

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
            G  A A E+F +M+++ +  +  T+ +VLSAC++AG     + H +S+   HG + R++
Sbjct: 276 SGMCADAFELFRRMVSEKVPLDEFTFTSVLSACANAGF----FVHGKSV---HGQIIRLQ 328

Query: 628 H----------YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
                         +V L  + G +  A     +M L  DV+ W T L
Sbjct: 329 PNFVPEAALPVNNALVTLYSKGGKIVIAKRIFDTMNLK-DVVSWNTIL 375



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/141 (26%), Positives = 75/141 (53%), Gaps = 1/141 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G  + A+   + M  +   P   TY+  + +C        G+ +H+ L +   E +
Sbjct: 409 YVHGGLSEDALKLFNQMRAEDVKPCDYTYAGAIAACGELGALKHGRQLHAHLVQCGFEAS 468

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +   N+L+++Y+KCG +N+A  +F  M N  D VSW++MIS+    G   +A+ +F +M+
Sbjct: 469 NSAGNALLTMYAKCGAVNDARLVFLVMPN-LDSVSWNAMISALGQHGHGREALELFDQMV 527

Query: 173 ELGFCPNEYCFSAVIRACSNT 193
             G  P+   F  ++ AC++ 
Sbjct: 528 AEGIDPDRISFLTILTACNHA 548


>gi|224131918|ref|XP_002328140.1| predicted protein [Populus trichocarpa]
 gi|222837655|gb|EEE76020.1| predicted protein [Populus trichocarpa]
          Length = 534

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 222/538 (41%), Positives = 337/538 (62%), Gaps = 9/538 (1%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L++MY K    G + D++ VFD+M D NV+SWT +I+ Y  +   DK A++    M++  
Sbjct: 6   LINMYVKF---GLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDK-ALEFLVLMLREG 61

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           V PN FT++SVL+AC  L +     Q++   +K G   D  V ++LI +Y+R G +E+A 
Sbjct: 62  VRPNMFTYSSVLRACDGLFN---LRQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENAL 118

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           + F+ +   +LV +++++  +A+N + ++A  L   ++  G      T  S+L   + + 
Sbjct: 119 RVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLA 178

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
            +  G Q+H  ++K  ++ +  + NAL+ MY +C ++E A  VF  M +++VISW++MI 
Sbjct: 179 LLELGRQVHVHVLK--YDQDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVISWSTMIA 236

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           G A++G++  AL++F  M   GIKPN +T + VL ACSHAGL+ EG  +F SM +  GI 
Sbjct: 237 GLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFACSHAGLVEEGLYYFHSMKELFGID 296

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
              EHY CM+DLLGR+G L+EA++ I  M    D + WR  L ACRVH + ++  HAA+ 
Sbjct: 297 PGREHYGCMIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACRVHRNVDVAIHAAKQ 356

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           IL  DPQD   ++LLSN+YA+   W  VA +R+ M  R + KE GCSWIE   ++H F +
Sbjct: 357 ILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGIKKEPGCSWIEVSKQIHAFIL 416

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+ SHP+  EI  +L+QL  K+   GY+PDTNFVL +LE EQ    L  HSEK+A+ FGL
Sbjct: 417 GDRSHPQIREINIQLNQLIYKLMGVGYVPDTNFVLQDLEGEQMQDSLRYHSEKLAIVFGL 476

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +S  + + IR+ KNLR+CGDCH   K ++ +  R IV+RD  R+HH +DG CSC D+W
Sbjct: 477 MSLPRGQTIRIRKNLRICGDCHLFTKLLAKMEQRIIVIRDPVRYHHFQDGLCSCGDFW 534



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 125/375 (33%), Positives = 205/375 (54%), Gaps = 28/375 (7%)

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++N LI++Y K G L++A  +F  M + R++VSW++MIS+Y        A+   V ML  
Sbjct: 2   LINILINMYVKFGLLHDAQDVFDKMPD-RNVVSWTTMISAYSAAKLNDKALEFLVLMLRE 60

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN + +S+V+RAC    N+   H     ++K G  DSDV V  ALID++ +   +LE
Sbjct: 61  GVRPNMFTYSSVLRACDGLFNLRQLHCC---IIKIG-LDSDVFVRSALIDVYSRWG-ELE 115

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           +A +VFD+M   + V W+ +I    Q     +A+RLF  M  +GFL  + TL+ V+ AC+
Sbjct: 116 NALRVFDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACT 175

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L L   G+Q+H   ++     D+ +  +L+DMY KC   GS++D+  VF RM++ +V+S
Sbjct: 176 GLALLELGRQVHVHVLKYD--QDLILNNALLDMYCKC---GSLEDANAVFVRMVEKDVIS 230

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ--VYT 412
           W+ +I G  Q+ G  KEA+KLF  M    + PN+ T   VL AC +   + + E+   Y 
Sbjct: 231 WSTMIAGLAQN-GYSKEALKLFESMKVLGIKPNYVTIVGVLFACSH---AGLVEEGLYYF 286

Query: 413 HAVKR------GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYA 465
           H++K       GR    C    +I +  R+GR+ +A      +  E + V++  +++A  
Sbjct: 287 HSMKELFGIDPGREHYGC----MIDLLGRAGRLSEAVDLINEMECEPDAVTWRALLNACR 342

Query: 466 KNLNSEKAFELLHEI 480
            + N + A     +I
Sbjct: 343 VHRNVDVAIHAAKQI 357



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 114/405 (28%), Positives = 197/405 (48%), Gaps = 58/405 (14%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           LND    KA+  L LM ++G  P++ TYS +L++C     F+L +L H  + +  L+ + 
Sbjct: 46  LND----KALEFLVLMLREGVRPNMFTYSSVLRAC--DGLFNLRQL-HCCIIKIGLDSDV 98

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++LI +YS+ G+L  A ++F  M    D+V WSS+I+ +       +A+ +F  M  
Sbjct: 99  FVRSALIDVYSRWGELENALRVFDEMVTG-DLVVWSSIIAGFAQNSDGDEALRLFKRMKR 157

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            GF   +   ++V+RAC+    + +G  ++  +LK   +D D+ +  AL+DM+ K GS  
Sbjct: 158 AGFLAQQTTLTSVLRACTGLALLELGRQVHVHVLK---YDQDLILNNALLDMYCKCGS-- 212

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           LE A  VF +M EK+ + W+ MI    Q G  ++A++LF  M + G  P+  T+ GV+ A
Sbjct: 213 LEDANAVFVRMVEKDVISWSTMIAGLAQNGYSKEALKLFESMKVLGIKPNYVTIVGVLFA 272

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS   L   G                    S+ +++        +D  R+ +  M+D   
Sbjct: 273 CSHAGLVEEGLYYFH---------------SMKELFG-------IDPGREHYGCMID--- 307

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
                     +   GR  EAV L ++M   +  P+  T+ ++L AC    + +VA     
Sbjct: 308 ---------LLGRAGRLSEAVDLINEM---ECEPDAVTWRALLNACRVHRNVDVA----I 351

Query: 413 HAVKRGRALD--DCVGNSLIS-MYARSGRMEDARKAFESLFEKNL 454
           HA K+   LD  D     L+S +YA + R  D  +   ++  + +
Sbjct: 352 HAAKQILRLDPQDAGTYVLLSNIYANTQRWNDVAEVRRTMTNRGI 396



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/248 (31%), Positives = 132/248 (53%), Gaps = 11/248 (4%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI+MY + G + DA+  F+ + ++N+VS+ TM+ AY+    ++KA E L  +   GV 
Sbjct: 4   NILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREGVR 63

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + +T++S+L     +  +    Q+H  IIK G +S+  + +ALI +YSR   +E A +V
Sbjct: 64  PNMFTYSSVLRACDGLFNL---RQLHCCIIKIGLDSDVFVRSALIDVYSRWGELENALRV 120

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F EM   +++ W+S+I GFA++     AL +F +M   G      T  +VL AC+   L+
Sbjct: 121 FDEMVTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRACTGLALL 180

Query: 607 SEGWK-HFRSM-YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
             G + H   + YD+  I+        ++D+  + GSL +A      M +  DV+ W T 
Sbjct: 181 ELGRQVHVHVLKYDQDLILNN-----ALLDMYCKCGSLEDANAVFVRM-VEKDVISWSTM 234

Query: 665 LGACRVHG 672
           +     +G
Sbjct: 235 IAGLAQNG 242



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 105/237 (44%), Gaps = 47/237 (19%)

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + N LI+MY +   +  A  VF +M DRNV+SWT+MI+ ++      +ALE    ML +G
Sbjct: 2   LINILINMYVKFGLLHDAQDVFDKMPDRNVVSWTTMISAYSAAKLNDKALEFLVLMLREG 61

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMY---DEHGIVQRMEHYACMVDLLGRSGSL 642
           ++PN  TY +VL AC       +G  + R ++    + G+   +   + ++D+  R G L
Sbjct: 62  VRPNMFTYSSVLRAC-------DGLFNLRQLHCCIIKIGLDSDVFVRSALIDVYSRWGEL 114

Query: 643 TEALEFIRSMPLSADVLVW-----------------RTF------------------LGA 667
             AL     M ++ D++VW                 R F                  L A
Sbjct: 115 ENALRVFDEM-VTGDLVVWSSIIAGFAQNSDGDEALRLFKRMKRAGFLAQQTTLTSVLRA 173

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           C      ELG+     +L+ D QD   +  L ++Y   G  E    +  RM E+++I
Sbjct: 174 CTGLALLELGRQVHVHVLKYD-QDLILNNALLDMYCKCGSLEDANAVFVRMVEKDVI 229


>gi|77551591|gb|ABA94388.1| PPR986-12, putative, expressed [Oryza sativa Japonica Group]
          Length = 694

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 247/618 (39%), Positives = 359/618 (58%), Gaps = 7/618 (1%)

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL-SGVVSACSELELFTSGKQL 305
             V +T  I+   Q G P  A+  F  M+  G  P+ FT  S   +A S     T G Q+
Sbjct: 81  TVVSYTAFISGAAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQI 140

Query: 306 HSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           HS AIR G L +D  V C+ +DMY K    G +  +R +F  M + NV++W A++T  V 
Sbjct: 141 HSLAIRFGYLPVDPFVSCAALDMYFK---TGRLKLARHLFGEMPNRNVVAWNAVMTNAVL 197

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
            G R  E ++ +  + +    PN  +  +   AC   +  ++ EQ +   VK G  +D  
Sbjct: 198 DG-RPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVS 256

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V NS++  Y +      AR  F+ +  +N VS+ +MV AYA+N   E+AF        +G
Sbjct: 257 VLNSMVDFYGKCRCAGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 316

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
              + +  +S L+  + +  +  G  +HA  ++S  ++N  + +AL+ MY +C  VE A 
Sbjct: 317 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVEDAE 376

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHA 603
           Q+F E   RN+++W +MI G+A  G A  AL +F  M+  G   PN IT + V+++CS  
Sbjct: 377 QIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCSRG 436

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL  +G++ F +M +  GI  R EHYAC+VDLLGR+G   +A E I+ MP+   + VW  
Sbjct: 437 GLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGA 496

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            LGAC++HG TELG+ AAE + E DPQD   H+LLSN++ASAG W    +IRK MK   +
Sbjct: 497 LLGACKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMFASAGRWAEATDIRKEMKNVGI 556

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K+ GCSW+   N VH F   +T H    EI A L +L  +++  GY+PDT + L++LEE
Sbjct: 557 KKDPGCSWVTWKNVVHVFRAKDTKHEMYNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEE 616

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E+K   +FQHSEK+A+AFGLI      PIR+ KNLR+C DCH A K+IS + GREI++RD
Sbjct: 617 EEKESEVFQHSEKLALAFGLICIPPGVPIRIMKNLRICVDCHRAFKFISGIVGREIIVRD 676

Query: 844 SNRFHHIKDGKCSCNDYW 861
           +NRFHH K  +CSC DYW
Sbjct: 677 NNRFHHFKQYQCSCGDYW 694



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 134/530 (25%), Positives = 240/530 (45%), Gaps = 72/530 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEP-NSV 114
           GR   A+     M + G  P+  T+    K+   +     +G  +HSL  R    P +  
Sbjct: 96  GRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPF 155

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  + + +Y K G L  A  +F  M N R++V+W++++++ V  G+ ++ I  +  + E 
Sbjct: 156 VSCAALDMYFKTGRLKLARHLFGEMPN-RNVVAWNAVMTNAVLDGRPLETIEAYFGLREA 214

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN     A   AC+    +++G   +GF++KCG F+ DV V  +++D + K      
Sbjct: 215 GGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCG-FEMDVSVLNSMVDFYGKCRC-AG 272

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  VFD M  +N+V W  M+    Q G   +A   +L    SG  P  F +S  ++ C+
Sbjct: 273 KARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCA 332

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L     G+ LH+ A+R+ +  ++ V  +LVDMY KC   G V+D+ ++F      N+++
Sbjct: 333 GLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKC---GCVEDAEQIFYETPQRNLVT 389

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           W A+I GY   G   + A+ +F DMI+ G+ APN+ T  +V+ +C               
Sbjct: 390 WNAMIGGYAHIGD-AQNALLVFDDMIRSGETAPNYITLVNVITSC--------------- 433

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNL 468
                               +R G  +D  + FE++ E+  +      Y  +VD   +  
Sbjct: 434 --------------------SRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAG 473

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLS-----GASSIGAIGKGEQIHARIIKSGFESN 523
             E+A+E+   I+   +  S   + +LL      G + +G I   +        SG   N
Sbjct: 474 MEEQAYEV---IQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQDSG---N 527

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNV--------ISWTSMITGF 565
           H +   L +M++       A  + KEM++  +        ++W +++  F
Sbjct: 528 HVL---LSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVF 574



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 67/289 (23%), Positives = 122/289 (42%), Gaps = 5/289 (1%)

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           AL   +   L+++Y++      A  A  S     +VSY   +   A++     A      
Sbjct: 48  ALSPFICAHLVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISGAAQHGRPLPALSAFAG 107

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGK-GEQIHARIIKSGF-ESNHCIYNALISMYSRC 537
           +   G+  + +TF S    A+S       G QIH+  I+ G+   +  +  A + MY + 
Sbjct: 108 MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFKT 167

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             ++ A  +F EM +RNV++W +++T     G     +E ++ +   G  PN ++  A  
Sbjct: 168 GRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAFF 227

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           +AC+ A  +S G + F     + G    +     MVD  G+     +A      M +   
Sbjct: 228 NACAGAMYLSLG-EQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGVRNS 286

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           V  W + + A   +G  E    AA +   +  ++P   ++ S L   AG
Sbjct: 287 V-SWCSMVAAYAQNGAEEEA-FAAYLGARRSGEEPTDFMVSSALTTCAG 333



 Score = 45.8 bits (107), Expect = 0.088,   Method: Compositional matrix adjust.
 Identities = 42/162 (25%), Positives = 69/162 (42%), Gaps = 7/162 (4%)

Query: 508 GEQIHAR---IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           G   HAR   +I        C +  L+++YS+     AA           V+S+T+ I+G
Sbjct: 34  GRAAHARALRLIAPALSPFICAH--LVNLYSKLDLPAAAAAALASDPHPTVVSYTAFISG 91

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
            A+HG    AL  F  ML  G++PN  T+ +   A + A   S       S+    G + 
Sbjct: 92  AAQHGRPLPALSAFAGMLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLP 151

Query: 625 RMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
                +C  +D+  ++G L  A      MP + +V+ W   +
Sbjct: 152 VDPFVSCAALDMYFKTGRLKLARHLFGEMP-NRNVVAWNAVM 192


>gi|297801640|ref|XP_002868704.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
 gi|297314540|gb|EFH44963.1| EMB2744 [Arabidopsis lyrata subsp. lyrata]
          Length = 710

 Score =  457 bits (1177), Expect = e-126,   Method: Compositional matrix adjust.
 Identities = 236/682 (34%), Positives = 396/682 (58%), Gaps = 8/682 (1%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFD--SDVCVGCALIDMFVKGSVDLESAYKVF 240
            + +++ C+N+  +  G  I+G L+         DV    +LI+++VK    +  A KVF
Sbjct: 34  LNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVR-ARKVF 92

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACSELELF 299
           D M E+N V W  M+      G   + ++LF  M+ S    P+ F  + V  +CS     
Sbjct: 93  DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMVFSDESRPNEFVATVVFKSCSSSGRI 152

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GKQ H   +++GL     V  +LV MY+ C+ +G   ++ +V D +   ++  +++ +
Sbjct: 153 EEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNG---EAIRVLDDLPYCDLSVFSSAL 209

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +GY++ G   KE  ++   M +  +  ++ T+ S L+ C NL D N+A Q+++  V+ G 
Sbjct: 210 SGYLECGAF-KEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMVRLGF 268

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
             +     ++I+MY + G++  A++ F++   +N+V   T++DAY ++ + E+A  L  +
Sbjct: 269 NSEVEASGAIINMYGKCGKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFEEALNLFSK 328

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           ++   V  + YTFA  L+  + +  +  G+ +H  ++KSG+ ++  + NAL++MY++  +
Sbjct: 329 MDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +E A + F  M  R++++W +MI GF+ HG     LE F +M+  G  PN IT+I VL A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRITFIGVLQA 448

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CSH G + +G  +F  +  +  +   ++HY C+V LL ++G   +A +F+R+ P+  DV+
Sbjct: 449 CSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
            WR  L AC V  +  LGK  AE  + + P D   ++LLSN++A +  WE VA +R  M 
Sbjct: 509 AWRALLNACYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSNIHAKSREWEGVAEVRSLMN 568

Query: 720 ERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
           +R + KE G SWI   N+ H F   E  HP+   IYA++ ++  KI+  GY PD   V H
Sbjct: 569 KRGVKKEPGVSWIGIRNQTHVFLAEENQHPEITLIYAKIKEVLSKIRPLGYSPDVAGVFH 628

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           +++EEQ+   L  HSEK+AVA+GL+ T ++ P+ V KN+R+C DCH+AIK IS ++ R I
Sbjct: 629 DVDEEQREDNLSYHSEKLAVAYGLMKTPENSPLYVTKNVRICDDCHSAIKLISKISKRYI 688

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           V+RDSNRFHH +DG+CSC DYW
Sbjct: 689 VIRDSNRFHHFRDGQCSCCDYW 710



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 145/563 (25%), Positives = 259/563 (46%), Gaps = 39/563 (6%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLL---TRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           +D  + LLK C  S     G+ +H  L    +S    +   +NSLI+LY KCG+   A K
Sbjct: 31  IDRLNELLKVCANSSYLRTGESIHGHLIVTNQSSRAKDVYQINSLINLYVKCGETVRARK 90

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC----PNEYCFSAVIRAC 190
           +F  M  +R++VSW +M+  Y N G   + + +F  M+   F     PNE+  + V ++C
Sbjct: 91  VFDLMP-ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMV---FSDESRPNEFVATVVFKSC 146

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
           S++  +  G   +G  LK G    +  V   L+ M+   S + E A +V D +   +   
Sbjct: 147 SSSGRIEEGKQFHGCFLKSGLMSHEF-VRNTLVYMYSLCSGNGE-AIRVLDDLPYCDLSV 204

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           ++  ++   + G  ++   +   M     + D  T    +  CS L      +Q+HS  +
Sbjct: 205 FSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMV 264

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           R G   +V    ++++MY KC   G V  +++VFD     N++  T I+  Y Q    + 
Sbjct: 265 RLGFNSEVEASGAIINMYGKC---GKVLYAQRVFDNTHAQNIVLNTTIMDAYFQDKSFE- 320

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+ LFS M   +V PN +TFA  L +   L      + ++   +K G      VGN+L+
Sbjct: 321 EALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYRNHVMVGNALV 380

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           +MYA+SG +EDARKAF  +  +++V++NTM+  ++ +    +  E    +   G   +  
Sbjct: 381 NMYAKSGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRI 440

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           TF  +L   S +G + +G     +++K    + +   Y  ++ + S+         +FK+
Sbjct: 441 TFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLLSKAG-------MFKD 493

Query: 550 MED--------RNVISWTSMITGFAKHGFAARALEIFYKMLADGI--KPNGITYIAVLSA 599
            ED         +V++W +++       +  R   +  K+    I   PN      +LS 
Sbjct: 494 AEDFMRTAPIEWDVVAWRALLNA----CYVRRNFRLGKKVAEYAIYKYPNDSGVYVLLSN 549

Query: 600 CSHAGLISEGWKHFRSMYDEHGI 622
                   EG    RS+ ++ G+
Sbjct: 550 IHAKSREWEGVAEVRSLMNKRGV 572



 Score =  129 bits (324), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 188/391 (48%), Gaps = 11/391 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+    +++ KSC  S     GK  H    +S L  +  + N+L+ +YS C    EA ++
Sbjct: 134 PNEFVATVVFKSCSSSGRIEEGKQFHGCFLKSGLMSHEFVRNTLVYMYSLCSGNGEAIRV 193

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
              +    D+  +SS +S Y+  G   +   +   M +     +   + + +R CSN  +
Sbjct: 194 LDDLPYC-DLSVFSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRD 252

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +   I+  +++ G F+S+V    A+I+M+ K    L  A +VFD    +N V  T ++
Sbjct: 253 LNLARQIHSRMVRLG-FNSEVEASGAIINMYGKCGKVL-YAQRVFDNTHAQNIVLNTTIM 310

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               Q     +A+ LF  M      P+ +T +  +++ +EL L   G  LH   +++G  
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGYR 370

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-GRDKEAVK 374
             V VG +LV+MYAK    GS++D+RK F  M   ++++W  +I G+   G GR  E ++
Sbjct: 371 NHVMVGNALVNMYAK---SGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGR--EGLE 425

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMY 433
            F  M+     PN  TF  VL+AC ++         +   +K+     D    + ++ + 
Sbjct: 426 AFDRMMIAGEIPNRITFIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCIVGLL 485

Query: 434 ARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           +++G  +DA     +   E ++V++  +++A
Sbjct: 486 SKAGMFKDAEDFMRTAPIEWDVVAWRALLNA 516



 Score =  109 bits (272), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 84/329 (25%), Positives = 162/329 (49%), Gaps = 15/329 (4%)

Query: 46  LSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT 105
            S+ L  +L  G  ++    L  M ++    D  TY   L+ C   R+ +L + +HS + 
Sbjct: 205 FSSALSGYLECGAFKEGAEVLRRMAKEDLVLDNITYLSCLRLCSNLRDLNLARQIHSRMV 264

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           R           ++I++Y KCG +  A ++F +  + ++IV  ++++ +Y       +A+
Sbjct: 265 RLGFNSEVEASGAIINMYGKCGKVLYAQRVFDNT-HAQNIVLNTTIMDAYFQDKSFEEAL 323

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
           ++F +M      PNEY F+  + + +    +  G +++G +LK GY  + V VG AL++M
Sbjct: 324 NLFSKMDTKEVPPNEYTFAISLNSIAELSLLKHGDLLHGLVLKSGY-RNHVMVGNALVNM 382

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           + K S  +E A K F  MT ++ V W  MI   +  G  R+ +  F  M+++G +P+R T
Sbjct: 383 YAK-SGSIEDARKAFSGMTFRDIVTWNTMICGFSHHGLGREGLEAFDRMMIAGEIPNRIT 441

Query: 286 LSGVVSACS-----ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
             GV+ ACS     E  L+   + +  + ++  L    C+    V + +K  +    +D 
Sbjct: 442 FIGVLQACSHVGFVEQGLYYFNQLMKKFNVQPDLQHYTCI----VGLLSKAGMFKDAEDF 497

Query: 341 RKVFDRMLDHNVMSWTAIITG-YVQSGGR 368
            +     ++ +V++W A++   YV+   R
Sbjct: 498 MRTAP--IEWDVVAWRALLNACYVRRNFR 524


>gi|356570738|ref|XP_003553542.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53360,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/695 (35%), Positives = 397/695 (57%), Gaps = 10/695 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           TY  L+ +C   R+   GK +H  + +S  +P+ V+ N ++++Y KCG L +A K F +M
Sbjct: 82  TYVNLILACTNVRSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTM 141

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
              R +VSW+ MIS Y   G++ DAI M+++ML  G+ P++  F ++I+AC    ++ +G
Sbjct: 142 -QLRSVVSWTIMISGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLG 200

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             ++G ++K GY D  +    ALI M+ K    +  A  VF  ++ K+ + W  MIT  T
Sbjct: 201 GQLHGHVIKSGY-DHHLIAQNALISMYTKFG-QIAHASDVFTMISTKDLISWASMITGFT 258

Query: 260 QLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           QLG   +A+ LF DM   G + P+ F    V SAC  L     G+Q+     + GL  +V
Sbjct: 259 QLGYEIEALYLFRDMFRQGVYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFGLGRNV 318

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
             GCSL DMYAK    G +  +++ F ++   +++SW AII     S     EA+  F  
Sbjct: 319 FAGCSLCDMYAKF---GFLPSAKRAFYQIESPDLVSWNAIIAALANSDV--NEAIYFFCQ 373

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           MI   + P+  TF ++L ACG+ +  N   Q++++ +K G      V NSL++MY +   
Sbjct: 374 MIHMGLMPDDITFLNLLCACGSPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSN 433

Query: 439 MEDARKAFESLFEK-NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           + DA   F+ + E  NLVS+N ++ A +++    +AF L   +  +       T  ++L 
Sbjct: 434 LHDAFNVFKDISENGNLVSWNAILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILG 493

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + + ++  G Q+H   +KSG   +  + N LI MY++C  ++ A  VF   ++ +++S
Sbjct: 494 TCAELVSLEVGNQVHCFSVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVS 553

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W+S+I G+A+ G    AL +F  M   G++PN +TY+ VLSACSH GL+ EGW  + +M 
Sbjct: 554 WSSLIVGYAQFGLGQEALNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTME 613

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            E GI    EH +CMVDLL R+G L EA  FI+      D+ +W+T L +C+ HG+ ++ 
Sbjct: 614 IELGIPPTREHVSCMVDLLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIA 673

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           + AAE IL+ DP + AA +LLSN++ASAG+W+ VA +R  MK+  + K  G SWIE  ++
Sbjct: 674 ERAAENILKLDPSNSAALVLLSNIHASAGNWKEVARLRNLMKQMGVQKVPGQSWIEVKDQ 733

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           +H F   ++SHP+   IY  L+ L L++ + GY P
Sbjct: 734 IHVFFSEDSSHPQRGNIYTMLEDLWLQMLDDGYDP 768



 Score =  231 bits (590), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 153/533 (28%), Positives = 270/533 (50%), Gaps = 15/533 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+   AI     M + G  PD  T+  ++K+C  + +  LG  +H  + +S  + + + 
Sbjct: 159 NGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYDHHLIA 218

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+LIS+Y+K G +  A+ +F +M + +D++SW+SMI+ +   G +++A+++F +M   G
Sbjct: 219 QNALISMYTKFGQIAHASDVF-TMISTKDLISWASMITGFTQLGYEIEALYLFRDMFRQG 277

Query: 176 -FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
            + PNE+ F +V  AC +      G  I G   K G    +V  GC+L DM+ K    L 
Sbjct: 278 VYQPNEFIFGSVFSACRSLLKPEFGRQIQGMCAKFG-LGRNVFAGCSLCDMYAKFGF-LP 335

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           SA + F ++   + V W  +I          +AI  F  MI  G +PD  T   ++ AC 
Sbjct: 336 SAKRAFYQIESPDLVSWNAIIAALANSDV-NEAIYFFCQMIHMGLMPDDITFLNLLCACG 394

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVM 353
                  G Q+HS+ I+ GL     V  SL+ MY KC+   ++ D+  VF  + ++ N++
Sbjct: 395 SPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCS---NLHDAFNVFKDISENGNLV 451

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SW AI++   Q   +  EA +LF  M+  +  P++ T  ++L  C  L+   V  QV+  
Sbjct: 452 SWNAILSACSQH-KQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCF 510

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           +VK G  +D  V N LI MYA+ G ++ AR  F+S    ++VS+++++  YA+    ++A
Sbjct: 511 SVKSGLVVDVSVSNRLIDMYAKCGLLKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEA 570

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALIS 532
             L   + + GV  +  T+  +LS  S IG + +G  ++  + I+ G        + ++ 
Sbjct: 571 LNLFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYNTMEIELGIPPTREHVSCMVD 630

Query: 533 MYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKM 581
           + +R   +  A    K+   D ++  W +++     HG    A RA E   K+
Sbjct: 631 LLARAGCLYEAENFIKKTGFDPDITMWKTLLASCKTHGNVDIAERAAENILKL 683



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/305 (27%), Positives = 148/305 (48%), Gaps = 9/305 (2%)

Query: 30  PSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           PS+   F    +      N +I  L +  V +AI+    M   G  PD  T+  LL +C 
Sbjct: 335 PSAKRAFYQIESPDLVSWNAIIAALANSDVNEAIYFFCQMIHMGLMPDDITFLNLLCACG 394

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
                + G  +HS + +  L+  + + NSL+++Y+KC +L++A  +FK +    ++VSW+
Sbjct: 395 SPMTLNQGMQIHSYIIKMGLDKVAAVCNSLLTMYTKCSNLHDAFNVFKDISENGNLVSWN 454

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           +++S+     +  +A  +F  ML     P+    + ++  C+   ++ +G+ ++ F +K 
Sbjct: 455 AILSACSQHKQPGEAFRLFKLMLFSENKPDNITITTILGTCAELVSLEVGNQVHCFSVKS 514

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
           G    DV V   LIDM+ K  + L+ A  VFD     + V W+ +I    Q G  ++A+ 
Sbjct: 515 GLV-VDVSVSNRLIDMYAKCGL-LKHARYVFDSTQNPDIVSWSSLIVGYAQFGLGQEALN 572

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
           LF  M   G  P+  T  GV+SACS + L   G  L++        +++ +G      + 
Sbjct: 573 LFRMMRNLGVQPNEVTYLGVLSACSHIGLVEEGWHLYN-------TMEIELGIPPTREHV 625

Query: 330 KCTVD 334
            C VD
Sbjct: 626 SCMVD 630



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 58/250 (23%), Positives = 134/250 (53%), Gaps = 16/250 (6%)

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH-EIEDTGVGTSAYTFASLLSGASSI 502
           +++++ +    +S N+ ++   K  +  +A +  +  ++++ +     T+ +L+   +++
Sbjct: 34  ESYDTNYHGGELSTNSYINLMCKQQHYREALDTFNFHLKNSSIQLEPSTYVNLILACTNV 93

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            ++  G++IH  I+KS  + +  + N +++MY +C +++ A + F  M+ R+V+SWT MI
Sbjct: 94  RSLKYGKRIHDHILKSNCQPDLVLQNHILNMYGKCGSLKDARKAFDTMQLRSVVSWTIMI 153

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH----FRSMYD 618
           +G++++G    A+ ++ +ML  G  P+ +T+ +++ AC  AG I  G +      +S YD
Sbjct: 154 SGYSQNGQENDAIIMYIQMLRSGYFPDQLTFGSIIKACCIAGDIDLGGQLHGHVIKSGYD 213

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
            H I Q       ++ +  + G +  A + + +M  + D++ W     A  + G T+LG 
Sbjct: 214 HHLIAQN-----ALISMYTKFGQIAHASD-VFTMISTKDLISW-----ASMITGFTQLGY 262

Query: 679 HAAEMILEQD 688
               + L +D
Sbjct: 263 EIEALYLFRD 272


>gi|449448280|ref|XP_004141894.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
 gi|449513125|ref|XP_004164238.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Cucumis sativus]
          Length = 645

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/589 (42%), Positives = 355/589 (60%), Gaps = 39/589 (6%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+  +R GL  +  +   L   YA     G +D S  VF+   + NV S++AII  +V
Sbjct: 65  QIHASLLRRGLYHNPILNFKLQRSYAAL---GRLDCSVFVFNTFDEPNVFSFSAIIHSHV 121

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           QS   D+ A   +S M+   V PN FTF+SVLK+C   L+S   + ++  A+K G   D 
Sbjct: 122 QSRLFDR-AFGYYSQMLSCGVEPNAFTFSSVLKSCS--LES--GKVLHCQAIKLGLGSDL 176

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED- 482
            V   L+ +YAR G +  AR+ F+ + E++LVS  TM+  Y+K    +KA  L   +++ 
Sbjct: 177 YVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKER 236

Query: 483 --------------TGVGTSAY----------------TFASLLSGASSIGAIGKGEQIH 512
                         +GV   +                 T  ++LS    +GA+  G  IH
Sbjct: 237 DVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIH 296

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           + I   G + N  +  ALI MYS+C ++E A  VF  + D++V++W SMI G+A HGF+ 
Sbjct: 297 SYIENKGIQINVHVGTALIDMYSKCGSLEDARLVFDRIRDKDVVAWNSMIVGYAMHGFSQ 356

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            AL++F +M   G KP  IT+I +LSAC H GL+ EG   FR M D++GI  ++EHY CM
Sbjct: 357 HALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSFFRLMRDKYGIEPKIEHYGCM 416

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           V+LLGR+G L EA   +++M ++AD ++W T LG CR+H + +LG+  A+ +++Q   + 
Sbjct: 417 VNLLGRAGHLEEAYGLVKNMTIAADPVLWGTLLGCCRLHVNIKLGEEIAKFLVDQKLANS 476

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
             ++LLSN+YA+ G+WE VA +R  MKE  + KE GCS IE DNKVH+F  GE  HPK+ 
Sbjct: 477 GTYVLLSNMYAATGNWEGVAKMRTLMKEHGIEKEHGCSSIEVDNKVHEFVAGERKHPKSK 536

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           EIY  L+++   +K  GY P T+ VLH+L EEQK Q L  HSEK+A+AFGLIST     +
Sbjct: 537 EIYVMLNEINSWLKARGYTPQTDVVLHDLREEQKEQSLEVHSEKLAIAFGLISTKPGTTV 596

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++ KNLRVC DCHT +K IS +TGR+IV+RD NRFHH +DG CSC DYW
Sbjct: 597 KIVKNLRVCSDCHTVMKMISEITGRKIVMRDRNRFHHFEDGLCSCGDYW 645



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 227/491 (46%), Gaps = 84/491 (17%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+ L R  L  N ++   L   Y+  G L+ +  +F +  ++ ++ S+S++I S+V   
Sbjct: 66  IHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTF-DEPNVFSFSAIIHSHVQSR 124

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
               A   + +ML  G  PN + FS+V+++CS    +  G +++   +K G   SD+ V 
Sbjct: 125 LFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS----LESGKVLHCQAIKLG-LGSDLYVR 179

Query: 220 CALIDMFVKGS------------------------------VDLESAYKVFDKMTEKNTV 249
             L+D++ +G                                +L+ A  +F+ M E++ V
Sbjct: 180 TGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKERDVV 239

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W +MI    Q G P ++++LF  M+++  +P+  T+  V+SAC +L    SG+ +HS+ 
Sbjct: 240 CWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWIHSYI 299

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
              G+ ++V VG +L+DMY+KC   GS++D+R VFDR+ D +V++W ++I GY    G  
Sbjct: 300 ENKGIQINVHVGTALIDMYSKC---GSLEDARLVFDRIRDKDVVAWNSMIVGYAMH-GFS 355

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           + A++LF +M +    P   TF  +L ACG+                             
Sbjct: 356 QHALQLFEEMTETGHKPTDITFIGILSACGH----------------------------- 386

Query: 430 ISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
                  G +E+ R  F  +      E  +  Y  MV+   +  + E+A+ L   +++  
Sbjct: 387 ------GGLVEEGRSFFRLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGL---VKNMT 437

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +      + +LL        I  GE+I A+ +     +N   Y  L +MY+   N E   
Sbjct: 438 IAADPVLWGTLLGCCRLHVNIKLGEEI-AKFLVDQKLANSGTYVLLSNMYAATGNWEGVA 496

Query: 545 QVFKEMEDRNV 555
           ++   M++  +
Sbjct: 497 KMRTLMKEHGI 507



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 200/421 (47%), Gaps = 39/421 (9%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ +  VF+   E N   ++ +I    Q      A   +  M+  G  P+ FT S V+ +
Sbjct: 95  LDCSVFVFNTFDEPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKS 154

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK-----CTVD------------- 334
           CS      SGK LH  AI+ GL  D+ V   LVD+YA+     C                
Sbjct: 155 CS----LESGKVLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSL 210

Query: 335 ----------GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
                     G +D +R +F+ M + +V+ W  +I GY QSG  + E++KLF  M+  + 
Sbjct: 211 TTMLTCYSKMGELDKARSLFEGMKERDVVCWNVMIGGYAQSGVPN-ESLKLFRRMLVAKA 269

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            PN  T  +VL ACG L        ++++   +G  ++  VG +LI MY++ G +EDAR 
Sbjct: 270 IPNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARL 329

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F+ + +K++V++N+M+  YA +  S+ A +L  E+ +TG   +  TF  +LS     G 
Sbjct: 330 VFDRIRDKDVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGL 389

Query: 505 IGKGEQIHARII--KSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSM 561
           + +G     R++  K G E     Y  ++++  R  ++E A+ + K M    + + W ++
Sbjct: 390 VEEGRSFF-RLMRDKYGIEPKIEHYGCMVNLLGRAGHLEEAYGLVKNMTIAADPVLWGTL 448

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           + G  +     +  E   K L D    N  TY+ +LS    A    EG    R++  EHG
Sbjct: 449 L-GCCRLHVNIKLGEEIAKFLVDQKLANSGTYV-LLSNMYAATGNWEGVAKMRTLMKEHG 506

Query: 622 I 622
           I
Sbjct: 507 I 507



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 123/284 (43%), Gaps = 38/284 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H+      +A      M   G  P+  T+S +LKSC    +   GK++H    +  L  +
Sbjct: 120 HVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSC----SLESGKVLHCQAIKLGLGSD 175

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------ 142
             +   L+ +Y++ GD+  A ++F  M  +                              
Sbjct: 176 LYVRTGLVDVYARGGDVVCARQLFDKMPERSLVSLTTMLTCYSKMGELDKARSLFEGMKE 235

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD+V W+ MI  Y   G   +++ +F  ML     PNE    AV+ AC     +  G  I
Sbjct: 236 RDVVCWNVMIGGYAQSGVPNESLKLFRRMLVAKAIPNEVTVLAVLSACGQLGALESGRWI 295

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           + ++   G    +V VG ALIDM+ K GS  LE A  VFD++ +K+ V W  MI      
Sbjct: 296 HSYIENKG-IQINVHVGTALIDMYSKCGS--LEDARLVFDRIRDKDVVAWNSMIVGYAMH 352

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           G  + A++LF +M  +G  P   T  G++SAC    L   G+  
Sbjct: 353 GFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGLVEEGRSF 396



 Score = 78.6 bits (192), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 11/210 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T   +L +C +      G+ +HS +    ++ N  +  +LI +YSKCG L +A  +
Sbjct: 271 PNEVTVLAVLSACGQLGALESGRWIHSYIENKGIQINVHVGTALIDMYSKCGSLEDARLV 330

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  + +K D+V+W+SMI  Y   G    A+ +F EM E G  P +  F  ++ AC +   
Sbjct: 331 FDRIRDK-DVVAWNSMIVGYAMHGFSQHALQLFEEMTETGHKPTDITFIGILSACGHGGL 389

Query: 196 VAIGHIIYGFLL-KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTL 253
           V  G   +  +  K G        GC ++++  +    LE AY +   MT   + V W  
Sbjct: 390 VEEGRSFFRLMRDKYGIEPKIEHYGC-MVNLLGRAG-HLEEAYGLVKNMTIAADPVLWG- 446

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
                T LGC R  + + L   ++ FL D+
Sbjct: 447 -----TLLGCCRLHVNIKLGEEIAKFLVDQ 471



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 41/162 (25%), Positives = 75/162 (46%), Gaps = 8/162 (4%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           FASL+  + S+  +    QIHA +++ G   N  +   L   Y+    ++ +  VF   +
Sbjct: 50  FASLIDKSKSVAHL---LQIHASLLRRGLYHNPILNFKLQRSYAALGRLDCSVFVFNTFD 106

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           + NV S++++I    +     RA   + +ML+ G++PN  T+ +VL +CS      E  K
Sbjct: 107 EPNVFSFSAIIHSHVQSRLFDRAFGYYSQMLSCGVEPNAFTFSSVLKSCS-----LESGK 161

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
                  + G+   +     +VD+  R G +  A +    MP
Sbjct: 162 VLHCQAIKLGLGSDLYVRTGLVDVYARGGDVVCARQLFDKMP 203


>gi|297829922|ref|XP_002882843.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297328683|gb|EFH59102.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 627

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/593 (38%), Positives = 360/593 (60%), Gaps = 6/593 (1%)

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
            L+M++ G          +++AC +      G+++H+  I+T       +   L+  Y K
Sbjct: 39  LLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGK 98

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C     ++D+RKV D M + NV+SWTA+I+ Y Q+G    EA+ +F++M++    PN FT
Sbjct: 99  CDC---LEDARKVLDEMPEKNVVSWTAMISRYSQTG-HSSEALSVFAEMMRSDGKPNEFT 154

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FA+VL +C       + +Q++   VK        VG+SL+ MYA++G++E+AR+ FE L 
Sbjct: 155 FATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIEEAREIFECLP 214

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E+++VS   ++  YA+    E+A E+   ++  G+  +  T+ASLL+  S +  +  G+Q
Sbjct: 215 ERDVVSCTAIIAGYAQLGLDEEALEMFQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQ 274

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
            H  +++        + N+LI MYS+C N+  A ++F  M +R  ISW +M+ G++KHG 
Sbjct: 275 AHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMPERTAISWNAMLVGYSKHGL 334

Query: 571 AARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMY-DEHGIVQRMEH 628
               LE+F  M  +  +KP+ +T +AVLS CSH  +   G   +  M   E+GI    EH
Sbjct: 335 GREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEH 394

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y C+VD+LGR+G + EA EFI+ MP      V  + LGACRVH   ++G++    ++E +
Sbjct: 395 YGCIVDMLGRAGRIDEAFEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGEYVGHRLIEIE 454

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P++   +++LSNLYASAG WE V N+R  M ++ + KE G SWI+ +  +H FH  + +H
Sbjct: 455 PENAGNYVILSNLYASAGRWEDVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTH 514

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
           P+  E+ A++ ++++K+K+ GY+PD + VL++++EEQK + L  HSEK+A+ FGLI+T +
Sbjct: 515 PRREEVLAKMKEISIKMKQAGYVPDISCVLYDVDEEQKEKMLLGHSEKLALTFGLITTGE 574

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             PIRVFKNLR+C DCH   K  S V  RE+ LRD NRFH I  G CSC DYW
Sbjct: 575 GIPIRVFKNLRICVDCHNFAKIFSKVFEREVSLRDKNRFHQIVKGICSCGDYW 627



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/415 (30%), Positives = 219/415 (52%), Gaps = 19/415 (4%)

Query: 31  SSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR 90
           SSSP  + Q  T  P+S       ++GR+Q+A+  + ++   G       Y  LL +C+ 
Sbjct: 13  SSSPNSVLQ--TFRPISQLC----SNGRLQEALLEMVML---GPEIGFHCYDALLNACLD 63

Query: 91  SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSS 150
            R    G+ VH+ + +++  P + +   L+  Y KC  L +A K+   M  K ++VSW++
Sbjct: 64  KRALREGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDCLEDARKVLDEMPEK-NVVSWTA 122

Query: 151 MISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCG 210
           MIS Y   G   +A+ +F EM+     PNE+ F+ V+ +C     +A+G  I+G ++K  
Sbjct: 123 MISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWN 182

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
           Y DS + VG +L+DM+ K    +E A ++F+ + E++ V  T +I    QLG   +A+ +
Sbjct: 183 Y-DSHIFVGSSLLDMYAKAG-QIEEAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEM 240

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  +   G  P+  T + +++A S L L   GKQ H   +R  L     +  SL+DMY+K
Sbjct: 241 FQRLQSEGMRPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSK 300

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHF 389
           C   G++  ++++FD M +   +SW A++ GY +  G  +E ++LF  M  + +V P+  
Sbjct: 301 C---GNLSYAQRLFDNMPERTAISWNAMLVGYSKH-GLGREVLELFRLMRDEKRVKPDAV 356

Query: 390 TFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           T  +VL  C  G + D+ ++      A + G   D      ++ M  R+GR+++A
Sbjct: 357 TLLAVLSGCSHGKMEDTGLSIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEA 411



 Score =  188 bits (478), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 122/406 (30%), Positives = 213/406 (52%), Gaps = 14/406 (3%)

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           IS   + G+  +A+   +EM+ LG     +C+ A++ AC +   +  G  ++  ++K  Y
Sbjct: 26  ISQLCSNGRLQEAL---LEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRY 82

Query: 212 FDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             +       LI     G  D LE A KV D+M EKN V WT MI+R +Q G   +A+ +
Sbjct: 83  LPATYLRTRLLI---FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSV 139

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F +M+ S   P+ FT + V+++C        GKQ+H   ++      + VG SL+DMYAK
Sbjct: 140 FAEMMRSDGKPNEFTFATVLTSCIRASGLALGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 199

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
               G ++++R++F+ + + +V+S TAII GY Q  G D+EA+++F  +    + PN+ T
Sbjct: 200 A---GQIEEAREIFECLPERDVVSCTAIIAGYAQL-GLDEEALEMFQRLQSEGMRPNYVT 255

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           +AS+L A   L   +  +Q + H ++R       + NSLI MY++ G +  A++ F+++ 
Sbjct: 256 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYAQRLFDNMP 315

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGE 509
           E+  +S+N M+  Y+K+    +  EL   + D   V   A T  ++LSG S       G 
Sbjct: 316 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGKMEDTGL 375

Query: 510 QIHARII--KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
            I+  ++  + G + +   Y  ++ M  R   ++ AF+  K M  +
Sbjct: 376 SIYDGMVAGEYGIKPDTEHYGCIVDMLGRAGRIDEAFEFIKRMPSK 421



 Score = 87.8 bits (216), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 97/184 (52%), Gaps = 11/184 (5%)

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           E L E+   G     + + +LL+      A+ +G+++HA +IK+ +     +   L+  Y
Sbjct: 37  EALLEMVMLGPEIGFHCYDALLNACLDKRALREGQRVHAHMIKTRYLPATYLRTRLLIFY 96

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C  +E A +V  EM ++NV+SWT+MI+ +++ G ++ AL +F +M+    KPN  T+ 
Sbjct: 97  GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALSVFAEMMRSDGKPNEFTFA 156

Query: 595 AVLSACSHAGLISEGWKHFRSM-----YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            VL++C  A  ++ G K    +     YD H  V      + ++D+  ++G + EA E  
Sbjct: 157 TVLTSCIRASGLALG-KQIHGLIVKWNYDSHIFVG-----SSLLDMYAKAGQIEEAREIF 210

Query: 650 RSMP 653
             +P
Sbjct: 211 ECLP 214


>gi|356528338|ref|XP_003532761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g18750,
           chloroplastic-like [Glycine max]
          Length = 785

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 251/741 (33%), Positives = 418/741 (56%), Gaps = 13/741 (1%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           +L+TY  +L+ C   ++   GK VHS+++ + +  + V+   L+ +Y  CGDL +  +IF
Sbjct: 56  ELNTYCSVLQLCAELKSLEDGKRVHSIISSNGMAIDEVLGAKLVFMYVNCGDLVKGRRIF 115

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             + N + I  W+ ++S Y   G   +++ +F +M ELG   + Y F+ V++  + +  V
Sbjct: 116 DGILNDK-IFLWNLLMSEYAKIGNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKV 174

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
                ++G++LK G+   +  V   +   F  G V  ESA  +FD++++++ V W  MI+
Sbjct: 175 RECKRVHGYVLKLGFGSYNAVVNSLIAAYFKCGEV--ESARILFDELSDRDVVSWNSMIS 232

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
            CT  G  R+ +  F+ M+  G   D  TL  V+ AC+ +   T G+ LH++ ++ G + 
Sbjct: 233 GCTMNGFSRNGLEFFIQMLNLGVDVDSATLVNVLVACANVGNLTLGRALHAYGVKAGFSG 292

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
            V    +L+DMY+KC   G+++ + +VF +M +  ++SWT+II  +V+ G    EA+ LF
Sbjct: 293 GVMFNNTLLDMYSKC---GNLNGANEVFVKMGETTIVSWTSIIAAHVREG-LHYEAIGLF 348

Query: 377 SDMIQGQVAPNHFTFASVLKACG--NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
            +M    + P+ +   SV+ AC   N LD     +V+ H  K     +  V N+L++MYA
Sbjct: 349 DEMQSKGLRPDIYAVTSVVHACACSNSLDK--GREVHNHIKKNNMGSNLPVSNALMNMYA 406

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G ME+A   F  L  KN+VS+NTM+  Y++N    +A +L  +++   +     T A 
Sbjct: 407 KCGSMEEANLIFSQLPVKNIVSWNTMIGGYSQNSLPNEALQLFLDMQKQ-LKPDDVTMAC 465

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   + + A+ KG +IH  I++ G+ S+  +  AL+ MY +C  +  A Q+F  +  ++
Sbjct: 466 VLPACAGLAALEKGREIHGHILRKGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKD 525

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           +I WT MI G+  HGF   A+  F KM   GI+P   ++ ++L AC+H+GL+ EGWK F 
Sbjct: 526 MILWTVMIAGYGMHGFGKEAISTFEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFD 585

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM  E  I  ++EHYACMVDLL RSG+L+ A +FI +MP+  D  +W   L  CR+H D 
Sbjct: 586 SMKSECNIEPKLEHYACMVDLLIRSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIHHDV 645

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           EL +  AE I E +P++   ++LL+N+YA A  WE V  I++R+ +  L  + GCSWIE 
Sbjct: 646 ELAEKVAEHIFELEPENTRYYVLLANVYAEAEKWEEVKKIQRRISKGGLKNDQGCSWIEV 705

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
             K + F  G+TSHP+   I + L +L +K+   GY     + L   ++  K   L  HS
Sbjct: 706 QGKFNIFFAGDTSHPQAKMIDSLLRKLTMKMNRGGYSNKIKYALINADDRLKEVLLCAHS 765

Query: 795 EKIAVAFGLISTSKSKPIRVF 815
           EK+A+   + +T  +K +  F
Sbjct: 766 EKLAM-LQVDATPHTKKVTCF 785



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 141/518 (27%), Positives = 261/518 (50%), Gaps = 18/518 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++++   + M + G   D  T++ +LK    S      K VH  + +      + ++
Sbjct: 137 GNYRESVGLFEKMQELGIRGDSYTFTCVLKGFAASAKVRECKRVHGYVLKLGFGSYNAVV 196

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI+ Y KCG++  A  +F  + + RD+VSW+SMIS     G   + +  F++ML LG 
Sbjct: 197 NSLIAAYFKCGEVESARILFDELSD-RDVVSWNSMISGCTMNGFSRNGLEFFIQMLNLGV 255

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +      V+ AC+N  N+ +G  ++ + +K G F   V     L+DM+ K   +L  A
Sbjct: 256 DVDSATLVNVLVACANVGNLTLGRALHAYGVKAG-FSGGVMFNNTLLDMYSKCG-NLNGA 313

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF KM E   V WT +I    + G   +AI LF +M   G  PD + ++ VV AC+  
Sbjct: 314 NEVFVKMGETTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACS 373

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+++H+   +  +  ++ V  +L++MYAKC   GS++++  +F ++   N++SW 
Sbjct: 374 NSLDKGREVHNHIKKNNMGSNLPVSNALMNMYAKC---GSMEEANLIFSQLPVKNIVSWN 430

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I GY Q+     EA++LF DM Q Q+ P+  T A VL AC  L       +++ H ++
Sbjct: 431 TMIGGYSQN-SLPNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILR 488

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           +G   D  V  +L+ MY + G +  A++ F+ + +K+++ +  M+  Y  +   ++A   
Sbjct: 489 KGYFSDLHVACALVDMYVKCGLLVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAIST 548

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHCIYNALI 531
             ++   G+     +F S+L   +  G + +G ++   +     I+   E   C+ + LI
Sbjct: 549 FEKMRVAGIEPEESSFTSILYACTHSGLLKEGWKLFDSMKSECNIEPKLEHYACMVDLLI 608

Query: 532 SMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
               R  N+  A++  + M  + +   W ++++G   H
Sbjct: 609 ----RSGNLSRAYKFIETMPIKPDAAIWGALLSGCRIH 642



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 148/265 (55%), Gaps = 4/265 (1%)

Query: 41  TTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
           TT    ++ +  H+ +G   +AI   D M  KG  PD+   + ++ +C  S +   G+ V
Sbjct: 323 TTIVSWTSIIAAHVREGLHYEAIGLFDEMQSKGLRPDIYAVTSVVHACACSNSLDKGREV 382

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
           H+ + ++ +  N  + N+L+++Y+KCG + EAN IF  +  K +IVSW++MI  Y     
Sbjct: 383 HNHIKKNNMGSNLPVSNALMNMYAKCGSMEEANLIFSQLPVK-NIVSWNTMIGGYSQNSL 441

Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
             +A+ +F++M +    P++   + V+ AC+    +  G  I+G +L+ GYF SD+ V C
Sbjct: 442 PNEALQLFLDM-QKQLKPDDVTMACVLPACAGLAALEKGREIHGHILRKGYF-SDLHVAC 499

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           AL+DM+VK  + L  A ++FD + +K+ + WT+MI      G  ++AI  F  M ++G  
Sbjct: 500 ALVDMYVKCGL-LVLAQQLFDMIPKKDMILWTVMIAGYGMHGFGKEAISTFEKMRVAGIE 558

Query: 281 PDRFTLSGVVSACSELELFTSGKQL 305
           P+  + + ++ AC+   L   G +L
Sbjct: 559 PEESSFTSILYACTHSGLLKEGWKL 583


>gi|224126883|ref|XP_002319950.1| predicted protein [Populus trichocarpa]
 gi|222858326|gb|EEE95873.1| predicted protein [Populus trichocarpa]
          Length = 746

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/630 (36%), Positives = 370/630 (58%), Gaps = 5/630 (0%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           ++  A K+FDK  + +   W  ++   ++ G    AI ++  M ++   PD F+   V+ 
Sbjct: 122 EVSCARKLFDKFPDPDVFLWNAIVRCYSRHGFFGHAIEMYARMQVACVSPDGFSFPCVLK 181

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS L     G+++H    R G   DV V   LV +YAKC   G +  +  VF R++D  
Sbjct: 182 ACSALPALEMGRRVHGQIFRHGFESDVFVQNGLVALYAKC---GEIVRANAVFGRLVDRT 238

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SWT+II+GY Q+G +  EA+++FS+M +  V P+     SVL+A  ++ D    + ++
Sbjct: 239 IVSWTSIISGYAQNG-QPIEALRIFSEMRKTNVRPDWIALVSVLRAYTDVEDLEHGKSIH 297

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K G   +  +  SL S+YA+ G +  AR  F  +   +L+ +N M+  Y KN  +E
Sbjct: 298 GCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFFNQVENPSLIFWNAMISGYVKNGYAE 357

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A EL   ++   +   + T  S ++  + IG++     +   I  S F ++  +  +LI
Sbjct: 358 EAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYISMSEFRNDVIVNTSLI 417

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
             Y++C +V+ A  VF  + D++V+ W++M+ G+  HG    ++ +F+ M   G+ PN +
Sbjct: 418 DTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESIILFHAMRQAGVSPNDV 477

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++ +L+AC ++GL+ EGW  F  M D +GI  R +HYAC+VDLLGR+G L  A  F+ +
Sbjct: 478 TFVGLLTACKNSGLVEEGWDLFHRMRD-YGIEPRHQHYACVVDLLGRAGHLDRAYNFVMN 536

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+   V VW   L AC++H    LG++AAE +   DP +   ++ LSNLYAS+  W+ V
Sbjct: 537 MPIEPGVSVWGALLSACKIHRHVTLGEYAAERLFSLDPYNTGHYVQLSNLYASSCLWDCV 596

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           A +R  M+E+ L K  G S IE + K+  F  G+ +HP++ EI+ E++ L  ++KE G++
Sbjct: 597 AKVRVLMREKGLTKHLGYSVIEINGKLQAFQAGDKTHPRSKEIFEEVEDLERRLKEAGFV 656

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           P T  VLH+L  E+  + L  HSE++A+A+GLIST     +R+ KNLR C +CH AIK I
Sbjct: 657 PHTESVLHDLNYEETEETLCNHSERLAIAYGLISTPPGTTLRITKNLRACDNCHAAIKLI 716

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S +  REIV+RD+ RFHH KDG CSC DYW
Sbjct: 717 SKLVSREIVVRDACRFHHFKDGACSCGDYW 746



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 150/575 (26%), Positives = 271/575 (47%), Gaps = 27/575 (4%)

Query: 2   MTLSLPAPAKIPPP-SSFKPSNPSRQNLPPSSSPPFIAQPTTSEPL------SNRLIYHL 54
           M  SLP   + P   SSF    P    + P   PPF    +T + L      S  L  H 
Sbjct: 1   MAKSLPFLTRPPNKVSSFIALCPQPFKIRPLDPPPFRFPASTLKFLETHYSSSLNLTTHF 60

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N+ +        D   +    PD    SL+  S  ++   HL ++   LL  + L+    
Sbjct: 61  NNNK--------DDCNESTFKPDKFYASLIDDSIHKT---HLNQIYAKLLV-TGLQYGGF 108

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++  L++  S  G+++ A K+F    +  D+  W++++  Y   G    AI M+  M   
Sbjct: 109 LIAKLVNKASNIGEVSCARKLFDKFPDP-DVFLWNAIVRCYSRHGFFGHAIEMYARMQVA 167

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+ + F  V++ACS    + +G  ++G + + G F+SDV V   L+ ++ K   ++ 
Sbjct: 168 CVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHG-FESDVFVQNGLVALYAKCG-EIV 225

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  VF ++ ++  V WT +I+   Q G P +A+R+F +M  +   PD   L  V+ A +
Sbjct: 226 RANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRPDWIALVSVLRAYT 285

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           ++E    GK +H   I+ GL  +  +  SL  +YAKC   G V  +R  F+++ + +++ 
Sbjct: 286 DVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKC---GHVMVARLFFNQVENPSLIF 342

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A+I+GYV++ G  +EA++LF  M    + P+  T  S + AC  +    +A  +  + 
Sbjct: 343 WNAMISGYVKN-GYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLELARWMDEYI 401

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                  D  V  SLI  YA+ G ++ AR  F+ + +K++V ++ M+  Y  +    ++ 
Sbjct: 402 SMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVVVWSAMMVGYGLHGQGRESI 461

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L H +   GV  +  TF  LL+   + G + +G  +  R+   G E  H  Y  ++ + 
Sbjct: 462 ILFHAMRQAGVSPNDVTFVGLLTACKNSGLVEEGWDLFHRMRDYGIEPRHQHYACVVDLL 521

Query: 535 SRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            R  +++ A+     M  +  V  W ++++    H
Sbjct: 522 GRAGHLDRAYNFVMNMPIEPGVSVWGALLSACKIH 556



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 82/350 (23%), Positives = 162/350 (46%), Gaps = 34/350 (9%)

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q+Y   +  G      +   L++  +  G +  ARK F+   + ++  +N +V  Y+++ 
Sbjct: 93  QIYAKLLVTGLQYGGFLIAKLVNKASNIGEVSCARKLFDKFPDPDVFLWNAIVRCYSRHG 152

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
               A E+   ++   V    ++F  +L   S++ A+  G ++H +I + GFES+  + N
Sbjct: 153 FFGHAIEMYARMQVACVSPDGFSFPCVLKACSALPALEMGRRVHGQIFRHGFESDVFVQN 212

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            L+++Y++C  +  A  VF  + DR ++SWTS+I+G+A++G    AL IF +M    ++P
Sbjct: 213 GLVALYAKCGEIVRANAVFGRLVDRTIVSWTSIISGYAQNGQPIEALRIFSEMRKTNVRP 272

Query: 589 NGITYIAVLSACS-----------HAGLISEGWK-------HFRSMYDE--HGIVQRME- 627
           + I  ++VL A +           H  +I  G +          S+Y +  H +V R+  
Sbjct: 273 DWIALVSVLRAYTDVEDLEHGKSIHGCVIKMGLECEFDLLISLTSLYAKCGHVMVARLFF 332

Query: 628 ---------HYACMVDLLGRSGSLTEALEFIRSMP---LSADVLVWRTFLGACRVHGDTE 675
                     +  M+    ++G   EA+E  R M    +  D +   + + AC   G  E
Sbjct: 333 NQVENPSLIFWNAMISGYVKNGYAEEAIELFRLMKSKNIRPDSITVTSSIAACAQIGSLE 392

Query: 676 LGKHAAEMI-LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           L +   E I + +   D   +  L + YA  G  +    +  R+ +++++
Sbjct: 393 LARWMDEYISMSEFRNDVIVNTSLIDTYAKCGSVDMARFVFDRIPDKDVV 442


>gi|28392910|gb|AAO41891.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 630

 Score =  457 bits (1176), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/613 (37%), Positives = 369/613 (60%), Gaps = 12/613 (1%)

Query: 252 TLMITRCTQLGCPRDAIRLF--LDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           TL+++  T+L   RD  R    +D + S G   D  T S ++  C        G  +   
Sbjct: 27  TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
               G    + +   L++MY K  +   ++D+ ++FD+M   NV+SWT +I+ Y +    
Sbjct: 87  LYFNGHRPMMFLVNVLINMYVKFNL---LNDAHQLFDQMPQRNVISWTTMISAYSKCKIH 143

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
            K A++L   M++  V PN +T++SVL++C  + D      ++   +K G   D  V ++
Sbjct: 144 QK-ALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD---VRMLHCGIIKEGLESDVFVRSA 199

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI ++A+ G  EDA   F+ +   + + +N+++  +A+N  S+ A EL   ++  G    
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             T  S+L   + +  +  G Q H  I+K  ++ +  + NAL+ MY +C ++E A +VF 
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFN 317

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           +M++R+VI+W++MI+G A++G++  AL++F +M + G KPN IT + VL ACSHAGL+ +
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           GW +FRSM   +GI    EHY CM+DLLG++G L +A++ +  M    D + WRT LGAC
Sbjct: 378 GWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           RV  +  L ++AA+ ++  DP+D   + LLSN+YA++  W+ V  IR RM++R + KE G
Sbjct: 438 RVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPG 497

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
           CSWIE + ++H F +G+ SHP+ +E+  +L+QL  ++   GY+P+TNFVL +LE EQ   
Sbjct: 498 CSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMED 557

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
            L  HSEK+A+AFGL++    K IR+ KNLR+CGDCH   K  S +  R IV+R   R+H
Sbjct: 558 SLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRGPIRYH 617

Query: 849 HIKDGKCSCNDYW 861
           H +DGKCSC DYW
Sbjct: 618 HFQDGKCSCGDYW 630



 Score =  190 bits (483), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 136/425 (32%), Positives = 224/425 (52%), Gaps = 31/425 (7%)

Query: 48  NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS 107
            RL Y  +  R  KA   +D +   G   D  TYS L+K CI +R  H G L+   L  +
Sbjct: 34  TRLCYQRDLPRAMKA---MDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
              P   ++N LI++Y K   LN+A+++F  M  +R+++SW++MIS+Y        A+ +
Sbjct: 91  GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALEL 149

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY----FDSDVCVGCALI 223
            V ML     PN Y +S+V+R+C+   +V + H        CG      +SDV V  ALI
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLH--------CGIIKEGLESDVFVRSALI 201

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           D+F K   + E A  VFD+M   + + W  +I    Q      A+ LF  M  +GF+ ++
Sbjct: 202 DVFAKLG-EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            TL+ V+ AC+ L L   G Q H   ++     D+ +  +LVDMY KC   GS++D+ +V
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKC---GSLEDALRV 315

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--L 401
           F++M + +V++W+ +I+G  Q+ G  +EA+KLF  M      PN+ T   VL AC +  L
Sbjct: 316 FNQMKERDVITWSTMISGLAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYN 458
           L+       Y  ++K+   +D    +   +I +  ++G+++DA K    +  E + V++ 
Sbjct: 375 LEDG---WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431

Query: 459 TMVDA 463
           T++ A
Sbjct: 432 TLLGA 436


>gi|413916018|gb|AFW55950.1| hypothetical protein ZEAMMB73_919937 [Zea mays]
          Length = 864

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/704 (34%), Positives = 407/704 (57%), Gaps = 7/704 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M+++G   D  T ++LLKSC    +  LG  +H+L  ++ LE +    ++L+ +Y KC  
Sbjct: 142 MSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTGLETDVRAGSALVDMYGKCRS 201

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L++A + F  MG +R+ VSW + I+  V   +    + +FV+M  LG   ++  +++  R
Sbjct: 202 LDDALRFFHGMG-ERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYASAFR 260

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           +C+    ++    ++   +K   F SD  VG A++D++ K   +L  A + F  +   N 
Sbjct: 261 SCAAMPCLSTARQLHAHAIK-NVFSSDRVVGTAIVDVYAKAG-NLVDARRAFIGLPHHNV 318

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
                M+    + G   +A++LF  M  SG   D  +LSGV SAC+E++ +  G Q+H  
Sbjct: 319 ETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQGLQVHCL 378

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           A+++G  +DVCV  +++D+Y KC    ++ ++  VF  M   + +SW AII    Q+   
Sbjct: 379 AVKSGFDVDVCVRNAILDLYGKCK---ALVEAYLVFQEMEQRDSVSWNAIIAALEQNECY 435

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           + + +   ++M++  + P+ FT+ SVLKAC  L        V+  A+K G  LD  V ++
Sbjct: 436 E-DTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSST 494

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           ++ MY + G + +A+K  + +  + LVS+N+++  ++    SE+A     E+ D GV   
Sbjct: 495 VVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPD 554

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
            +T+A++L   +++  I  G+QIH +IIK     +  I + L+ MY++C N+  +  +F+
Sbjct: 555 HFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLLMFE 614

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           +    + +SW +MI G+A HG    ALE+F +M    + PN  T++AVL ACSH GL+ +
Sbjct: 615 KARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLLDD 674

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           G ++F  M   + +V ++EH+ACMVD+LGRS    EALEFIRSMP+ AD +VW+T L  C
Sbjct: 675 GCQYFHLMTSRYKLVPQLEHFACMVDILGRSKGPQEALEFIRSMPIEADAVVWKTLLSIC 734

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           ++  D E+ + AA  +L  DP D + +ILLSN+YA +G W  V+  R+ M++  L KE G
Sbjct: 735 KIRQDVEVAETAASNVLRLDPDDASVYILLSNVYAGSGKWVDVSRTRRLMRQGRLRKEPG 794

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           CSWIE  +++H F VG+  HP++ E+Y  L+ L  ++K  GY P
Sbjct: 795 CSWIEVQSEMHGFLVGDKVHPRSKEVYEMLNSLIGEMKLSGYEP 838



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 161/637 (25%), Positives = 309/637 (48%), Gaps = 45/637 (7%)

Query: 80  TYSLLLKSCIRSRNFHL--GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           T+S L + C  +    L  G+  H+ +  S   P + + N L+ +Y++CG    A+ +F 
Sbjct: 19  TFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAHGVFD 78

Query: 138 SMGNKR------------------------------DIVSWSSMISSYVNRGKQVDAIHM 167
           +M ++                               D+VSW+++IS Y   G   +++ +
Sbjct: 79  TMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRNSVGL 138

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
            +EM   G   +    + ++++C   +++A+G  I+   +K G  ++DV  G AL+DM+ 
Sbjct: 139 SMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQIHALAVKTG-LETDVRAGSALVDMYG 197

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K    L+ A + F  M E+N+V W   I  C Q       + LF+ M   G    +   +
Sbjct: 198 K-CRSLDDALRFFHGMGERNSVSWGAAIAGCVQNEQYTRGMELFVQMQRLGLGVSQPAYA 256

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
               +C+ +   ++ +QLH+ AI+   + D  VG ++VD+YAK    G++ D+R+ F  +
Sbjct: 257 SAFRSCAAMPCLSTARQLHAHAIKNVFSSDRVVGTAIVDVYAKA---GNLVDARRAFIGL 313

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
             HNV +  A++ G V++ G   EA++LF  M +  V  +  + + V  AC  +      
Sbjct: 314 PHHNVETCNAMMVGLVRT-GLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGYFQG 372

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            QV+  AVK G  +D CV N+++ +Y +   + +A   F+ + +++ VS+N ++ A  +N
Sbjct: 373 LQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEMEQRDSVSWNAIIAALEQN 432

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              E     L+E+  +G+    +T+ S+L   + + ++  G  +H + IKSG   +  + 
Sbjct: 433 ECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVS 492

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           + ++ MY +C  +  A ++   +  + ++SW S+I+GF+    +  A   F +ML  G+K
Sbjct: 493 STVVDMYCKCGAITEAQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVK 552

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-L 646
           P+  TY  VL  C++   I  G K       +  ++      + +VD+  + G++ ++ L
Sbjct: 553 PDHFTYATVLDTCANLATIELG-KQIHGQIIKQEMLGDEYISSTLVDMYAKCGNMPDSLL 611

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            F ++  L  D + W   +    +HG    G  A EM
Sbjct: 612 MFEKARKL--DFVSWNAMICGYALHGQ---GLEALEM 643



 Score =  178 bits (452), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/371 (30%), Positives = 193/371 (52%), Gaps = 10/371 (2%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           FI  P  +    N ++  L   G   +A+     MT+ G   D+ + S +  +C   + +
Sbjct: 310 FIGLPHHNVETCNAMMVGLVRTGLGAEAMQLFQFMTRSGVGFDVISLSGVFSACAEVKGY 369

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G  VH L  +S  + +  + N+++ LY KC  L EA  +F+ M  +RD VSW+++I++
Sbjct: 370 FQGLQVHCLAVKSGFDVDVCVRNAILDLYGKCKALVEAYLVFQEM-EQRDSVSWNAIIAA 428

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
                   D I    EML  G  P+++ + +V++AC+  +++  G +++G  +K G    
Sbjct: 429 LEQNECYEDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSG-LGL 487

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D  V   ++DM+ K     E A K+ D++  +  V W  +I+  +      +A R F +M
Sbjct: 488 DAFVSSTVVDMYCKCGAITE-AQKLHDRIGGQELVSWNSIISGFSLTKQSEEAQRFFSEM 546

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +  G  PD FT + V+  C+ L     GKQ+H   I+  +  D  +  +LVDMYAKC   
Sbjct: 547 LDMGVKPDHFTYATVLDTCANLATIELGKQIHGQIIKQEMLGDEYISSTLVDMYAKC--- 603

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G++ DS  +F++    + +SW A+I GY    G+  EA+++F  M +  V PNH TF +V
Sbjct: 604 GNMPDSLLMFEKARKLDFVSWNAMICGYALH-GQGLEALEMFERMQRANVVPNHATFVAV 662

Query: 395 LKACGN--LLD 403
           L+AC +  LLD
Sbjct: 663 LRACSHVGLLD 673



 Score =  115 bits (288), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 68/245 (27%), Positives = 127/245 (51%), Gaps = 3/245 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           +  I  L+ M + G  PD  TY  +LK+C   ++   G +VH    +S L  ++ + +++
Sbjct: 436 EDTIAHLNEMLRSGMEPDDFTYGSVLKACAGLQSLEYGLVVHGKAIKSGLGLDAFVSSTV 495

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           + +Y KCG + EA K+   +G + ++VSW+S+IS +    +  +A   F EML++G  P+
Sbjct: 496 VDMYCKCGAITEAQKLHDRIGGQ-ELVSWNSIISGFSLTKQSEEAQRFFSEMLDMGVKPD 554

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
            + ++ V+  C+N   + +G  I+G ++K      D  +   L+DM+ K   ++  +  +
Sbjct: 555 HFTYATVLDTCANLATIELGKQIHGQIIKQEML-GDEYISSTLVDMYAKCG-NMPDSLLM 612

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F+K  + + V W  MI      G   +A+ +F  M  +  +P+  T   V+ ACS + L 
Sbjct: 613 FEKARKLDFVSWNAMICGYALHGQGLEALEMFERMQRANVVPNHATFVAVLRACSHVGLL 672

Query: 300 TSGKQ 304
             G Q
Sbjct: 673 DDGCQ 677



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/215 (21%), Positives = 92/215 (42%), Gaps = 33/215 (15%)

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC------- 537
           V T+ ++    L  ++   A+  G+  HAR++ SGF     + N L+ MY+RC       
Sbjct: 15  VATATFSHLYQLCASAGRSALTTGQAAHARMLVSGFMPTTFVSNCLLQMYARCGGTAHAH 74

Query: 538 ------------------------ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
                                    + + A  +F  M D +V+SW ++I+G+ +HG    
Sbjct: 75  GVFDTMPHRDTVSWNTMLTAYVHAGDTDTAASLFGTMPDPDVVSWNTLISGYCQHGMFRN 134

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           ++ +  +M   G+  +  T   +L +C     ++ G +   ++  + G+   +   + +V
Sbjct: 135 SVGLSMEMSRRGVALDRTTLAVLLKSCGGLDDLALGVQ-IHALAVKTGLETDVRAGSALV 193

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           D+ G+  SL +AL F   M    + + W   +  C
Sbjct: 194 DMYGKCRSLDDALRFFHGMG-ERNSVSWGAAIAGC 227


>gi|414869441|tpg|DAA47998.1| TPA: hypothetical protein ZEAMMB73_181337 [Zea mays]
          Length = 639

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 226/542 (41%), Positives = 328/542 (60%), Gaps = 8/542 (1%)

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  SL  MYAK    G +DD+ ++FD M   NV++WT ++     + GR +EA++    M
Sbjct: 106 VSNSLASMYAKF---GLLDDALRMFDGMPVRNVVTWTTVVAALASADGRKQEALRFLVAM 162

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +  VAPN +TF+SVL AC       +   V+   VK G   D  V +SLI  Y + G +
Sbjct: 163 RRDGVAPNAYTFSSVLGACTT---PGMLTAVHASTVKAGLDSDVFVRSSLIDAYVKLGDL 219

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           +  R+ F+ +  ++LV +N+++  +A++ +   A EL   ++D G  ++  T  S+L   
Sbjct: 220 DGGRRVFDEMVTRDLVVWNSIIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRAC 279

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           + +  +  G Q+HA ++K  ++ +  ++NAL+ MY +C ++E A  +F  M  R+VISW+
Sbjct: 280 TGMVMLEAGRQVHAHVLK--YDRDLILHNALLDMYCKCGSLEDADALFHRMPQRDVISWS 337

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +M++G A++G +  AL +F  M + G+ PN +T + VL ACSHAGL+ +GW +FRSM   
Sbjct: 338 TMVSGLAQNGKSVEALRVFDLMKSQGVAPNHVTMVGVLFACSHAGLVEDGWHYFRSMKRL 397

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            GI    EH+ CMVDLLGR+G L EA+EFI  M L  D ++WRT LGACR+H +  L  +
Sbjct: 398 FGIQPEREHHNCMVDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAY 457

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AA  IL+ +P D  A +LLSN YA    W       K M++R + KE G SWIE + +VH
Sbjct: 458 AAREILKLEPDDQGARVLLSNTYADLRQWTDAEKPWKAMRDRGMRKEPGRSWIELEKRVH 517

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
            F  G+ SHP +  I  EL++L  +IK  GY+P T FVL +L  EQK   L  HSEK+A+
Sbjct: 518 VFIAGDLSHPCSDTIIQELNRLIGRIKSLGYVPQTEFVLQDLPTEQKEDLLKYHSEKMAI 577

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
            FG +     KPIR+ KNLR+CGDCH   K +S   GR IV+RD  RFHH +DG CSC D
Sbjct: 578 VFGTMHAVDGKPIRIMKNLRICGDCHAFAKLVSKSEGRVIVIRDPVRFHHFQDGACSCGD 637

Query: 860 YW 861
           YW
Sbjct: 638 YW 639



 Score =  175 bits (444), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 223/412 (54%), Gaps = 26/412 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS-----VILNSLISLYSKCGDLNEANK 134
           + + L+K C+R      G+L+H  +      P+       + NSL S+Y+K G L++A +
Sbjct: 66  SLTRLVKLCVRHGTADHGRLIHRHVEAHGPLPHDGAGGLFVSNSLASMYAKFGLLDDALR 125

Query: 135 IFKSMGNKRDIVSWSSMISSYVNR-GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           +F  M   R++V+W++++++  +  G++ +A+   V M   G  PN Y FS+V+ AC+  
Sbjct: 126 MFDGM-PVRNVVTWTTVVAALASADGRKQEALRFLVAMRRDGVAPNAYTFSSVLGACTTP 184

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
             +     ++   +K G  DSDV V  +LID +VK   DL+   +VFD+M  ++ V W  
Sbjct: 185 GMLTA---VHASTVKAG-LDSDVFVRSSLIDAYVKLG-DLDGGRRVFDEMVTRDLVVWNS 239

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           +I    Q G    AI LF+ M  +GF  ++ TL+ V+ AC+ + +  +G+Q+H+  ++  
Sbjct: 240 IIAGFAQSGDGVGAIELFMRMKDAGFSSNQGTLTSVLRACTGMVMLEAGRQVHAHVLK-- 297

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              D+ +  +L+DMY KC   GS++D+  +F RM   +V+SW+ +++G  Q+ G+  EA+
Sbjct: 298 YDRDLILHNALLDMYCKC---GSLEDADALFHRMPQRDVISWSTMVSGLAQN-GKSVEAL 353

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV--YTHAVKR--GRALDDCVGNSL 429
           ++F  M    VAPNH T   VL AC +   + + E    Y  ++KR  G   +    N +
Sbjct: 354 RVFDLMKSQGVAPNHVTMVGVLFACSH---AGLVEDGWHYFRSMKRLFGIQPEREHHNCM 410

Query: 430 ISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           + +  R+G++++A +    +  E + V + T++ A   + N+  A     EI
Sbjct: 411 VDLLGRAGKLDEAVEFIHGMSLEPDSVIWRTLLGACRMHKNASLAAYAAREI 462


>gi|449520543|ref|XP_004167293.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g68930-like [Cucumis
           sativus]
          Length = 695

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 232/642 (36%), Positives = 371/642 (57%), Gaps = 41/642 (6%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           AL+  + K S  +++    FD+M  +++V +   I   +   CP++++ LF  M   GF 
Sbjct: 94  ALLSAYAK-SGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFE 152

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P  +T+  +++A ++L     GKQ+H   I      +V +  +L DMYAKC   G ++ +
Sbjct: 153 PTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNALTDMYAKC---GEIEQA 209

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R +FD +   N++SW  +I+GY ++G  +K  + L   M      P+  T ++++ A   
Sbjct: 210 RWLFDCLTKKNLVSWNLMISGYAKNGQPEK-CIGLLHQMRLSGHMPDQVTMSTIIAA--- 265

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                                           Y + GR+++AR+ F    EK++V +  M
Sbjct: 266 --------------------------------YCQCGRVDEARRVFSEFKEKDIVCWTAM 293

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +  YAKN   E A  L +E+    +   +YT +S++S  + + ++  G+ +H + I +G 
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            +N  + +ALI MYS+C  ++ A  VF  M  RNV+SW +MI G A++G    ALE+F  
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFEN 413

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           ML    KP+ +T+I +LSAC H   I +G ++F S+ ++HG+   ++HYACMV+LLGR+G
Sbjct: 414 MLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLDHYACMVNLLGRTG 473

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            + +A+  I++M    D L+W T L  C   GD    + AA  + E DP     +I+LSN
Sbjct: 474 RIEQAVALIKNMAHDPDFLIWSTLLSICSTKGDIVNAEVAARHLFELDPTIAVPYIMLSN 533

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +YAS G W+ VA++R  MK +N+ K AG SWIE DN+VH+F   + +HP++ +IY +L+ 
Sbjct: 534 MYASMGRWKDVASVRNLMKSKNVKKFAGFSWIEIDNEVHRFTSEDRTHPESEDIYEKLNM 593

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS-KPIRVFKNLR 819
           L  K++E G+ P+TN VLH++ E++K + +  HSEK+A+AFGLI       PIR+ KN+R
Sbjct: 594 LIGKLQEEGFTPNTNLVLHDVGEDEKFKSICFHSEKLALAFGLIKKPNGISPIRIIKNIR 653

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +C DCH  +K+ S + GR+I+LRDSNRFHH   GKCSCND W
Sbjct: 654 ICNDCHEFMKFASRIIGRQIILRDSNRFHHFSTGKCSCNDNW 695



 Score =  191 bits (486), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/519 (25%), Positives = 245/519 (47%), Gaps = 76/519 (14%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFK 137
           + Y+ L+  C+R+   +  K + S +     +P +S + N L+ LY+K G L +A  +F 
Sbjct: 23  EAYTQLVLECVRTNEINQAKRLQSHMEHHLFQPTDSFLHNQLLHLYAKFGKLRDAQNLFD 82

Query: 138 SMGNKRDIVSWSSMISSYVNRGK-------------------------------QVDAIH 166
            M  KRD  SW++++S+Y   G                                  +++ 
Sbjct: 83  KML-KRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDSVSYNTTIAGFSGNSCPQESLE 141

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M   GF P EY   +++ A +   ++  G  I+G ++   +   +V +  AL DM+
Sbjct: 142 LFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFL-GNVFIWNALTDMY 200

Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            K   ++E A  +FD +T+KN V W LMI+   + G P   I L   M LSG +PD+ T+
Sbjct: 201 AKCG-EIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPDQVTM 259

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           S +++A                                   Y +C   G VD++R+VF  
Sbjct: 260 STIIAA-----------------------------------YCQC---GRVDEARRVFSE 281

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
             + +++ WTA++ GY ++ GR+++A+ LF++M+   + P+ +T +SV+ +C  L   + 
Sbjct: 282 FKEKDIVCWTAMMVGYAKN-GREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHH 340

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            + V+  ++  G   +  V ++LI MY++ G ++DAR  F  +  +N+VS+N M+   A+
Sbjct: 341 GQAVHGKSILAGLNNNLLVSSALIDMYSKCGFIDDARSVFNLMPTRNVVSWNAMIVGCAQ 400

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHC 525
           N + + A EL   +          TF  +LS       I +G++    I  + G      
Sbjct: 401 NGHDKDALELFENMLQQKFKPDNVTFIGILSACLHCNWIEQGQEYFDSISNQHGMTPTLD 460

Query: 526 IYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMIT 563
            Y  ++++  R   +E A  + K M  D + + W+++++
Sbjct: 461 HYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLS 499



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 214/440 (48%), Gaps = 69/440 (15%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q+++     M ++G  P   T   +L +  +  +   GK +H  +       N  I N+L
Sbjct: 137 QESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGSIIVRNFLGNVFIWNAL 196

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
             +Y+KCG++ +A  +F  +  K+++VSW+ MIS Y   G+    I +  +M   G  P+
Sbjct: 197 TDMYAKCGEIEQARWLFDCL-TKKNLVSWNLMISGYAKNGQPEKCIGLLHQMRLSGHMPD 255

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           +   S +I A                  +CG  D                      A +V
Sbjct: 256 QVTMSTIIAA----------------YCQCGRVD---------------------EARRV 278

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F +  EK+ V WT M+    + G   DA+ LF +M+L    PD +TLS VVS+C++L   
Sbjct: 279 FSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASL 338

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+ +H  +I  GL  ++ V  +L+DMY+KC   G +DD+R VF+ M   NV+SW A+I
Sbjct: 339 HHGQAVHGKSILAGLNNNLLVSSALIDMYSKC---GFIDDARSVFNLMPTRNVVSWNAMI 395

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            G  Q+ G DK+A++LF +M+Q +  P++ TF  +L AC           ++ + +++G+
Sbjct: 396 VGCAQN-GHDKDALELFENMLQQKFKPDNVTFIGILSAC-----------LHCNWIEQGQ 443

Query: 420 ALDDCVGNS------------LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
              D + N             ++++  R+GR+E A    +++  + + + ++T++   + 
Sbjct: 444 EYFDSISNQHGMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHDPDFLIWSTLLSICST 503

Query: 467 N---LNSEKAFELLHEIEDT 483
               +N+E A   L E++ T
Sbjct: 504 KGDIVNAEVAARHLFELDPT 523



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 184/395 (46%), Gaps = 72/395 (18%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG-------------RD- 369
           L+ +YAK    G + D++ +FD+ML  +  SW A+++ Y +SG              RD 
Sbjct: 64  LLHLYAKF---GKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMPFRDS 120

Query: 370 ----------------KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
                           +E+++LF  M +    P  +T  S+L A   LLD    +Q++  
Sbjct: 121 VSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQIHGS 180

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            + R    +  + N+L  MYA+ G +E AR  F+ L +KNLVS+N M+  YAKN   EK 
Sbjct: 181 IIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQPEKC 240

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
             LLH++  +G      T ++                                   +I+ 
Sbjct: 241 IGLLHQMRLSGHMPDQVTMST-----------------------------------IIAA 265

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y +C  V+ A +VF E ++++++ WT+M+ G+AK+G    AL +F +ML + I+P+  T 
Sbjct: 266 YCQCGRVDEARRVFSEFKEKDIVCWTAMMVGYAKNGREEDALLLFNEMLLEHIEPDSYTL 325

Query: 594 IAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            +V+S+C+    +  G   H +S+    G+   +   + ++D+  + G + +A      M
Sbjct: 326 SSVVSSCAKLASLHHGQAVHGKSILA--GLNNNLLVSSALIDMYSKCGFIDDARSVFNLM 383

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           P + +V+ W   +  C  +G  +      E +L+Q
Sbjct: 384 P-TRNVVSWNAMIVGCAQNGHDKDALELFENMLQQ 417



 Score =  131 bits (329), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 194/413 (46%), Gaps = 69/413 (16%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE---PNS 113
           G +++A +  D +T+K    +L +++L++     ++N    K +  LL + +L    P+ 
Sbjct: 204 GEIEQARWLFDCLTKK----NLVSWNLMISG--YAKNGQPEKCI-GLLHQMRLSGHMPDQ 256

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           V ++++I+ Y +CG ++EA ++F     K DIV W++M+  Y   G++ DA+ +F EML 
Sbjct: 257 VTMSTIIAAYCQCGRVDEARRVFSEFKEK-DIVCWTAMMVGYAKNGREEDALLLFNEMLL 315

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
               P+ Y  S+V+ +C+   ++  G  ++G  +  G  ++++ V  ALIDM+ K G +D
Sbjct: 316 EHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAG-LNNNLLVSSALIDMYSKCGFID 374

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
              A  VF+ M  +N V W  MI  C Q G  +DA+ LF +M+   F PD  T  G++SA
Sbjct: 375 --DARSVFNLMPTRNVVSWNAMIVGCAQNGHDKDALELFENMLQQKFKPDNVTFIGILSA 432

Query: 293 CSELELFTSGKQLH-SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           C           LH +W                            ++  ++ FD + + +
Sbjct: 433 C-----------LHCNW----------------------------IEQGQEYFDSISNQH 453

Query: 352 VMSWT----AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            M+ T    A +   +   GR ++AV L  +M      P+   ++++L  C    D   A
Sbjct: 454 GMTPTLDHYACMVNLLGRTGRIEQAVALIKNMAHD---PDFLIWSTLLSICSTKGDIVNA 510

Query: 408 EQVYTHAVKRGRALDDCVGNSLI---SMYARSGRMEDARKAFESLFEKNLVSY 457
           E    H  +    LD  +    I   +MYA  GR +D       +  KN+  +
Sbjct: 511 EVAARHLFE----LDPTIAVPYIMLSNMYASMGRWKDVASVRNLMKSKNVKKF 559



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 69/264 (26%), Positives = 128/264 (48%), Gaps = 36/264 (13%)

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK-----NLNS------ 470
           D  + N L+ +YA+ G++ DA+  F+ + +++  S+N ++ AYAK     NL +      
Sbjct: 57  DSFLHNQLLHLYAKFGKLRDAQNLFDKMLKRDXFSWNALLSAYAKSGSIQNLKATFDRMP 116

Query: 471 --------------------EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
                               +++ EL   ++  G   + YT  S+L+ ++ +  +  G+Q
Sbjct: 117 FRDSVSYNTTIAGFSGNSCPQESLELFKRMQREGFEPTEYTIVSILNASAQLLDLRYGKQ 176

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IH  II   F  N  I+NAL  MY++C  +E A  +F  +  +N++SW  MI+G+AK+G 
Sbjct: 177 IHGSIIVRNFLGNVFIWNALTDMYAKCGEIEQARWLFDCLTKKNLVSWNLMISGYAKNGQ 236

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             + + + ++M   G  P+ +T   +++A    G + E  + F S + E  IV     + 
Sbjct: 237 PEKCIGLLHQMRLSGHMPDQVTMSTIIAAYCQCGRVDEARRVF-SEFKEKDIVC----WT 291

Query: 631 CMVDLLGRSGSLTEALEFIRSMPL 654
            M+    ++G   +AL     M L
Sbjct: 292 AMMVGYAKNGREEDALLLFNEMLL 315



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/165 (29%), Positives = 83/165 (50%), Gaps = 10/165 (6%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ +  +GR + A+   + M  +   PD  T S ++ SC +  + H G+ VH     + L
Sbjct: 294 MVGYAKNGREEDALLLFNEMLLEHIEPDSYTLSSVVSSCAKLASLHHGQAVHGKSILAGL 353

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             N ++ ++LI +YSKCG +++A  +F  M   R++VSW++MI      G   DA+ +F 
Sbjct: 354 NNNLLVSSALIDMYSKCGFIDDARSVFNLMPT-RNVVSWNAMIVGCAQNGHDKDALELFE 412

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            ML+  F P+   F  ++ AC +   +  G           YFDS
Sbjct: 413 NMLQQKFKPDNVTFIGILSACLHCNWIEQGQ---------EYFDS 448


>gi|357127001|ref|XP_003565175.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g18485-like [Brachypodium distachyon]
          Length = 849

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 282/834 (33%), Positives = 455/834 (54%), Gaps = 24/834 (2%)

Query: 41  TTSEPLSNRLIYHLND-GRVQKAIFTLD--LMTQKGNHPDLDTYSLLLKSCIRSRNFHLG 97
             S P  N L+  L+  GR   A+  L   L    G  PD  T    LKSC R  +   G
Sbjct: 27  AASLPQWNGLLADLSRAGRHADALAILPRLLAASDGVAPDRFTLPPALKSC-RGDD---G 82

Query: 98  KLVHSLLTRSKL-EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           + VH++  +  L + +  + NSL+S+Y +CG +++A K+F+ M   R++VSW++++++  
Sbjct: 83  RQVHAVAAKLGLADGDPFVGNSLVSMYGRCGRVDDAEKVFEGMAG-RNLVSWNALMAAVA 141

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           +  + ++     +E L     P+E     V+  C+       G  ++G  +K G+ D+  
Sbjct: 142 DPRRGLELFRDCLEDLGGTAAPDEATLVTVLPMCAALAWPETGRAVHGLAVKSGW-DAAP 200

Query: 217 CVGCALIDMFVKGS--VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            V   L+DM+ K     D E A+        +N V W +M+    + G    A  L  +M
Sbjct: 201 RVSNVLVDMYAKCGEMADAECAFLEAPPGAGRNVVSWNVMLGGYARNGEAGAAFGLLREM 260

Query: 275 ILS--GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV-CVGCSLVDMYAKC 331
            +   G   D  T+  V+  CS L      ++LH++ +R GL L    V  +L+  Y +C
Sbjct: 261 QMEERGVPADEITMLSVLPVCSGLPELAKLRELHAFVVRRGLHLTGDMVPNALIAAYGRC 320

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ--GQVAPNHF 389
              G +  + +VFD +    V SW A+I  + Q+G     A++LF +M    GQ  P+ F
Sbjct: 321 ---GCLLHACRVFDGICSKMVSSWNALIGAHAQNG-EASAAIELFREMTNACGQ-KPDWF 375

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           +  S+L ACGNL      +  +   ++ G   D  +  SL+S+Y + GR   AR  F+++
Sbjct: 376 SIGSLLLACGNLKHLLHGKAAHGFILRNGLEKDSFIRVSLLSVYIQCGRESLARVLFDAV 435

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG--TSAYTFASLLSGASSIGAIGK 507
            EK+ VS+NTM+  Y++N    ++ +L  E++    G   S     S L   S + A+  
Sbjct: 436 EEKDEVSWNTMIAGYSQNGLPGESLQLFREMQSKKGGHWPSLLAATSALVACSELPAVRL 495

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+++H   +K+    +  + +++I MYS+C +V+ A   F  ++ ++ +SWT MITG+A 
Sbjct: 496 GKEMHCFALKADLCEDSFLSSSIIDMYSKCGSVDDARVFFDRLKAKDAVSWTVMITGYAV 555

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           +G    A+ ++ KM  +G++P+G TY+ +L AC HAG++ +G   F+ M +   I  ++E
Sbjct: 556 NGRGKEAVGLYDKMGREGMEPDGFTYLGLLMACGHAGMLEDGLCFFQEMRNLPKIEAKLE 615

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HYAC++ +L R+G   +A+  +  MP   D  +  + L AC +HG+ ELGK  A+ +LE 
Sbjct: 616 HYACVIGMLSRAGRFADAVALMEVMPEEPDAKILSSVLSACHMHGEVELGKKVADKLLEL 675

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           +P     ++L SN+YA +  W+ +  +RK +++  + KE GCSWI+   KV+ F  GE S
Sbjct: 676 EPHKAEHYVLASNMYAGSRQWDEMRKVRKMLRDAGVAKEPGCSWIDIAGKVYSFVAGENS 735

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS 807
            P+  ++      L  KI+  GY PDT  +LHELEEE+KV+ L  HSEK A+AFGL+ T+
Sbjct: 736 LPEMHKVRKMWYSLEEKIRAAGYAPDTTVMLHELEEEEKVEALRWHSEKQAIAFGLLRTA 795

Query: 808 KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
               +RVFKN+R+C DCH A K IS V  REIV+RD  RFHH +DG CSC DYW
Sbjct: 796 GPTKVRVFKNIRMCKDCHNAAKLISKVADREIVVRDKKRFHHFRDGLCSCGDYW 849


>gi|356528130|ref|XP_003532658.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Glycine max]
          Length = 674

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/627 (37%), Positives = 377/627 (60%), Gaps = 29/627 (4%)

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           C +  IR   +  LS    +    S ++ AC  L+  + GKQLHS    +G + D  +  
Sbjct: 49  CSKGHIREAFESFLSEIWAEPRLFSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISN 108

Query: 323 SLVDMYAK---------------------CTVD-------GSVDDSRKVFDRMLDHNVMS 354
            L+++Y+K                     C +        G+++ ++ +FD M D NV +
Sbjct: 109 HLLNLYSKFGELQAAVALFDRMPRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVAT 168

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A++TG  +    ++EA+ LFS M +    P+ ++  SVL+ C +L      +QV+ + 
Sbjct: 169 WNAMVTGLTKFE-MNEEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYV 227

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K G   +  VG SL  MY ++G M D  +    + + +LV++NT++   A+    E   
Sbjct: 228 MKCGFECNLVVGCSLAHMYMKAGSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVL 287

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           +    ++  G      TF S++S  S +  + +G+QIHA  +K+G  S   + ++L+SMY
Sbjct: 288 DQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMY 347

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           SRC  ++ + + F E ++R+V+ W+SMI  +  HG    A+++F +M  + +  N IT++
Sbjct: 348 SRCGCLQDSIKTFLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFL 407

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           ++L ACSH GL  +G   F  M  ++G+  R++HY C+VDLLGRSG L EA   IRSMP+
Sbjct: 408 SLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPV 467

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
            AD ++W+T L AC++H + E+ +  A+ +L  DPQD A+++LL+N+Y+SA  W+ V+ +
Sbjct: 468 KADAIIWKTLLSACKIHKNAEIARRVADEVLRIDPQDSASYVLLANIYSSANRWQNVSEV 527

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R+ MK++ + KE G SW+E  N+VH+FH+G+  HPK +EI   L++L  +IK  GY+PDT
Sbjct: 528 RRAMKDKMVKKEPGISWVEVKNQVHQFHMGDECHPKHVEINQYLEELTSEIKRQGYVPDT 587

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           + VLH+++ E+K Q L  HSEK+A+AF L++T +  PIRV KNLRVC DCH AIKYIS +
Sbjct: 588 SSVLHDMDNEEKEQILRHHSEKLAIAFALMNTPEGVPIRVMKNLRVCSDCHVAIKYISEI 647

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
              EI++RDS+RFHH K+G CSC DYW
Sbjct: 648 KKLEIIVRDSSRFHHFKNGTCSCGDYW 674



 Score =  172 bits (435), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 221/432 (51%), Gaps = 38/432 (8%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK--- 137
           +S LL++CI  ++  LGK +HSL+  S    +  I N L++LYSK G+L  A  +F    
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGCSSDKFISNHLLNLYSKFGELQAAVALFDRMP 131

Query: 138 ---------------SMGN------------KRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
                           MGN             R++ +W++M++         +A+ +F  
Sbjct: 132 RRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFSR 191

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M EL F P+EY   +V+R C++   +  G  ++ +++KCG F+ ++ VGC+L  M++K  
Sbjct: 192 MNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCG-FECNLVVGCSLAHMYMKAG 250

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +    +V + M + + V W  +++   Q G     +  +  M ++GF PD+ T   V+
Sbjct: 251 -SMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVI 309

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           S+CSEL +   GKQ+H+ A++ G + +V V  SLV MY++C   G + DS K F    + 
Sbjct: 310 SSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRC---GCLQDSIKTFLECKER 366

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V+ W+++I  Y    G+ +EA+KLF++M Q  +  N  TF S+L AC +    +    +
Sbjct: 367 DVVLWSSMIAAY-GFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGL 425

Query: 411 YTHAVKR-GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNL 468
           +   VK+ G          L+ +  RSG +E+A     S+  + + + + T++ A   + 
Sbjct: 426 FDMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHK 485

Query: 469 NSEKAFELLHEI 480
           N+E A  +  E+
Sbjct: 486 NAEIARRVADEV 497



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 209/427 (48%), Gaps = 37/427 (8%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-------------- 228
           FS +++AC   ++V++G  ++  +   G   SD  +   L++++ K              
Sbjct: 72  FSNLLQACIPLKSVSLGKQLHSLIFTSGC-SSDKFISNHLLNLYSKFGELQAAVALFDRM 130

Query: 229 ----------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
                           G  +LESA  +FD+M ++N   W  M+T  T+     +A+ LF 
Sbjct: 131 PRRNIMSCNIMIKAYLGMGNLESAKNLFDEMPDRNVATWNAMVTGLTKFEMNEEALLLFS 190

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M    F+PD ++L  V+  C+ L    +G+Q+H++ ++ G   ++ VGCSL  MY K  
Sbjct: 191 RMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSLAHMYMKA- 249

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             GS+ D  +V + M D ++++W  +++G  Q G  +   +  +  M      P+  TF 
Sbjct: 250 --GSMHDGERVINWMPDCSLVAWNTLMSGKAQKGYFEG-VLDQYCMMKMAGFRPDKITFV 306

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           SV+ +C  L      +Q++  AVK G + +  V +SL+SMY+R G ++D+ K F    E+
Sbjct: 307 SVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGCLQDSIKTFLECKER 366

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           ++V +++M+ AY  +   E+A +L +E+E   +  +  TF SLL   S  G   KG  + 
Sbjct: 367 DVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLF 426

Query: 513 ARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGF 570
             ++K  G ++    Y  L+ +  R   +E A  + + M  + + I W ++++    H  
Sbjct: 427 DMMVKKYGLKARLQHYTCLVDLLGRSGCLEEAEAMIRSMPVKADAIIWKTLLSACKIHKN 486

Query: 571 AARALEI 577
           A  A  +
Sbjct: 487 AEIARRV 493



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 66/304 (21%), Positives = 130/304 (42%), Gaps = 8/304 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++A+     M +    PD  +   +L+ C        G+ VH+ + +   E N V+  SL
Sbjct: 183 EEALLLFSRMNELSFMPDEYSLGSVLRGCAHLGALLAGQQVHAYVMKCGFECNLVVGCSL 242

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
             +Y K G +++  ++   M +   +V+W++++S    +G     +  +  M   GF P+
Sbjct: 243 AHMYMKAGSMHDGERVINWMPDC-SLVAWNTLMSGKAQKGYFEGVLDQYCMMKMAGFRPD 301

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           +  F +VI +CS    +  G  I+   +K G       V   +      G   L+ + K 
Sbjct: 302 KITFVSVISSCSELAILCQGKQIHAEAVKAGASSEVSVVSSLVSMYSRCGC--LQDSIKT 359

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F +  E++ V W+ MI      G   +AI+LF +M       +  T   ++ ACS   L 
Sbjct: 360 FLECKERDVVLWSSMIAAYGFHGQGEEAIKLFNEMEQENLPGNEITFLSLLYACSHCGLK 419

Query: 300 TSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTA 357
             G  L    ++  GL   +     LVD+  +    G ++++  +   M +  + + W  
Sbjct: 420 DKGLGLFDMMVKKYGLKARLQHYTCLVDLLGR---SGCLEEAEAMIRSMPVKADAIIWKT 476

Query: 358 IITG 361
           +++ 
Sbjct: 477 LLSA 480



 Score = 61.2 bits (147), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 59/211 (27%), Positives = 103/211 (48%), Gaps = 8/211 (3%)

Query: 54  LNDGRVQKAIF--TLD---LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           L  G+ QK  F   LD   +M   G  PD  T+  ++ SC        GK +H+   ++ 
Sbjct: 273 LMSGKAQKGYFEGVLDQYCMMKMAGFRPDKITFVSVISSCSELAILCQGKQIHAEAVKAG 332

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
                 +++SL+S+YS+CG L ++ K F     +RD+V WSSMI++Y   G+  +AI +F
Sbjct: 333 ASSEVSVVSSLVSMYSRCGCLQDSIKTFLEC-KERDVVLWSSMIAAYGFHGQGEEAIKLF 391

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            EM +     NE  F +++ ACS+      G  ++  ++K     + +     L+D+  +
Sbjct: 392 NEMEQENLPGNEITFLSLLYACSHCGLKDKGLGLFDMMVKKYGLKARLQHYTCLVDLLGR 451

Query: 229 GSVDLESAYKVFDKMTEK-NTVGWTLMITRC 258
               LE A  +   M  K + + W  +++ C
Sbjct: 452 SGC-LEEAEAMIRSMPVKADAIIWKTLLSAC 481


>gi|302807080|ref|XP_002985271.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
 gi|300147099|gb|EFJ13765.1| hypothetical protein SELMODRAFT_121697 [Selaginella moellendorffii]
          Length = 744

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 246/749 (32%), Positives = 416/749 (55%), Gaps = 21/749 (2%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y++CG +  A + F +M   R++VSWS+MI++Y  RG   DA+ +FV M   G   N  
Sbjct: 1   MYNRCGSVIHARRAFDAM-VVRNVVSWSAMIAAYAQRGHPADALELFVRMDHEGVKANAI 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
            F +V+ AC++   +A+G  I+  ++  G    DV +G  +++M+ K G VDL  A +VF
Sbjct: 60  TFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCGEVDL--AREVF 117

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           ++M  KNTV W  MI  C++    ++A  L  +M L G  P++ TL  V+ AC+ ++  +
Sbjct: 118 ERMEAKNTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSIS 177

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+ +H      GL  D  V  +LV++Y KC   G +  +R   + +   + +SWT ++ 
Sbjct: 178 RGRIVHEIVAGEGLESDNAVANALVNLYGKC---GKLRAARHALEGIETRDKISWTTLLA 234

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            Y + G   K A+ +   M    V  + FTF ++L++C  +    + E+++    + G  
Sbjct: 235 AYARHG-HGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGIE 293

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           LD  +  +L+ MY + G  + AR+AF+ + + +++  +N ++ AY      ++   +   
Sbjct: 294 LDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFAR 353

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA------LISM 533
           +   GV   A TF S+L   +S+ A+G G   H+R+++ G      + +A      +I+M
Sbjct: 354 MSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINM 413

Query: 534 YSRC---ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           Y++C   A+ +A F   +     +V++W++M+  +++ G +  AL  FY M  +G+KP+ 
Sbjct: 414 YAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPDS 473

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +++++ ++ CSH+GL+ E    F S+  +HGI     H+AC+VDLL R+G + EA   +R
Sbjct: 474 VSFVSAIAGCSHSGLVREAVAFFTSLRHDHGIAPTEAHFACLVDLLSRAGWIREAEALMR 533

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
             PL A    W T L ACR +GD E  +           +  +A+ LL++++  +  W+ 
Sbjct: 534 RAPLGAHHSTWMTLLSACRTYGDLE--RARRVAARLASLRSGSAYSLLASVFCLSRKWDD 591

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS-HPKTLEIYAELDQLALKIKEFG 769
           V N R+ + ER  I + GCSWIE +N+V++F  G+    P+  EI+AEL++L ++I++ G
Sbjct: 592 VRNARQSLVERGFITQPGCSWIEINNRVYEFFAGDDRLLPREEEIFAELERLCVEIRKAG 651

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y  D    +H+  E++K   L  HSEK+AV FGLIST +  P+R+ KN+ VC DCH  IK
Sbjct: 652 YERDPIKKVHDHGEQEKKFLLSYHSEKVAVVFGLISTPEGTPLRIVKNIGVCQDCHEVIK 711

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCN 858
            IS V  R I LRD   FH    G CSC 
Sbjct: 712 CISEVADRVITLRDDRSFHQFSHGSCSCK 740



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 230/448 (51%), Gaps = 18/448 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCG 127
           M  +G   +  T+  +L +C       LGK +H  +    L  + VIL N+++++Y KCG
Sbjct: 49  MDHEGVKANAITFVSVLDACASLGAIALGKSIHERIVADGLLGDDVILGNTIVNMYGKCG 108

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           +++ A ++F+ M  K + V+W++MI++     +  +A  +  EM   G  PN+    +VI
Sbjct: 109 EVDLAREVFERMEAK-NTVTWNTMIAACSRHDRYKEAFALLGEMDLDGLRPNKITLVSVI 167

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            AC+  ++++ G I++  +   G  +SD  V  AL++++ K    L +A    + +  ++
Sbjct: 168 DACAWMQSISRGRIVHEIVAGEG-LESDNAVANALVNLYGKCG-KLRAARHALEGIETRD 225

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            + WT ++    + G  + AI +   M   G   D FT   ++ +C  +     G+++H 
Sbjct: 226 KISWTTLLAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHD 285

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSG 366
               +G+ LD  +  +LVDMY KC   G+ D +R+ FDRM D  +V  W A++  YV   
Sbjct: 286 RLAESGIELDPVLQTALVDMYGKC---GNPDAARRAFDRMRDVRDVTVWNALLAAYVLR- 341

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR------A 420
            + KE + +F+ M    VAP+  TF S+L AC +L    +    ++  ++RG       A
Sbjct: 342 DQGKETLGIFARMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVA 401

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFE---KNLVSYNTMVDAYAKNLNSEKAFELL 477
             D +  S+I+MYA+ G + DA+  F         ++V+++ MV AY++   SE+A    
Sbjct: 402 SADLLTTSVINMYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCF 461

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAI 505
           + ++  GV   + +F S ++G S  G +
Sbjct: 462 YSMQQEGVKPDSVSFVSAIAGCSHSGLV 489



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 174/354 (49%), Gaps = 19/354 (5%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R ++A   L  M   G  P+  T   ++ +C   ++   G++VH ++    LE ++ + N
Sbjct: 140 RYKEAFALLGEMDLDGLRPNKITLVSVIDACAWMQSISRGRIVHEIVAGEGLESDNAVAN 199

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +L++LY KCG L  A    + +   RD +SW++++++Y   G    AI +   M   G  
Sbjct: 200 ALVNLYGKCGKLRAARHALEGI-ETRDKISWTTLLAAYARHGHGKRAIAVIKRMDHEGVK 258

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
            + + F  ++ +C     +A+G  I+  L + G  + D  +  AL+DM+ K G+ D  +A
Sbjct: 259 LDSFTFVNLLESCVAIAALALGEEIHDRLAESG-IELDPVLQTALVDMYGKCGNPD--AA 315

Query: 237 YKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
            + FD+M + ++   W  ++         ++ + +F  M L G  PD  T   ++ AC+ 
Sbjct: 316 RRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFARMSLQGVAPDAVTFLSILDACAS 375

Query: 296 LELFTSGKQLHSWAIRTGL------ALDVCVGCSLVDMYAKCTVDGSVDDSRKVF---DR 346
           L     G+  HS  +  GL      A    +  S+++MYAKC   GS+ D++  F    R
Sbjct: 376 LAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVINMYAKC---GSLADAKAEFAKARR 432

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
               +V++W+A++  Y Q  G  +EA++ F  M Q  V P+  +F S +  C +
Sbjct: 433 ARASDVVAWSAMVAAYSQF-GLSEEALRCFYSMQQEGVKPDSVSFVSAIAGCSH 485



 Score =  123 bits (309), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 186/420 (44%), Gaps = 59/420 (14%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  +   G  ++AI  +  M  +G   D  T+  LL+SC+      LG+ +H  L  S +
Sbjct: 233 LAAYARHGHGKRAIAVIKRMDHEGVKLDSFTFVNLLESCVAIAALALGEEIHDRLAESGI 292

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E + V+  +L+ +Y KCG+ + A + F  M + RD+  W++++++YV R +  + + +F 
Sbjct: 293 ELDPVLQTALVDMYGKCGNPDAARRAFDRMRDVRDVTVWNALLAAYVLRDQGKETLGIFA 352

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL-----ID 224
            M   G  P+   F +++ AC++   + +G + +  +L+ G FD        L     I+
Sbjct: 353 RMSLQGVAPDAVTFLSILDACASLAALGLGRLTHSRMLERGLFDRQAVASADLLTTSVIN 412

Query: 225 MFVK-GSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           M+ K GS+ D ++ +    +    + V W+ M+   +Q G   +A+R F  M   G  PD
Sbjct: 413 MYAKCGSLADAKAEFAKARRARASDVVAWSAMVAAYSQFGLSEEALRCFYSMQQEGVKPD 472

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV----GCSLVDMYAKCTVDGSVD 338
             +    ++ CS           HS  +R  +A    +    G +  + +  C VD    
Sbjct: 473 SVSFVSAIAGCS-----------HSGLVREAVAFFTSLRHDHGIAPTEAHFACLVD---- 517

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
               +  R              G++    R+ EA+     M +  +  +H T+ ++L AC
Sbjct: 518 ----LLSR-------------AGWI----REAEAL-----MRRAPLGAHHSTWMTLLSAC 551

Query: 399 GNL--LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
                L+          +++ G A      + L S++  S + +D R A +SL E+  ++
Sbjct: 552 RTYGDLERARRVAARLASLRSGSAY-----SLLASVFCLSRKWDDVRNARQSLVERGFIT 606


>gi|125575213|gb|EAZ16497.1| hypothetical protein OsJ_31969 [Oryza sativa Japonica Group]
          Length = 617

 Score =  457 bits (1175), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/621 (39%), Positives = 377/621 (60%), Gaps = 6/621 (0%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M  +N V WT +++  +Q     DA+  F  M  +G  P RF LS    A + L     G
Sbjct: 1   MPRRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPG 60

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
            QLH   +R G   ++ V  +L DMY+KC   G + ++ +VFD+M   + ++WTA+I GY
Sbjct: 61  AQLHCVGVRLGFDTELFVASNLADMYSKC---GLLSEACRVFDQMPQKDAVAWTAMIDGY 117

Query: 363 VQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            ++G  +  AV  F DM  +G V  +   F SVL A G L D  +++ ++    K G  L
Sbjct: 118 AKNGSLEA-AVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 176

Query: 422 DDCVGNSLISMYARSGRMEDARKAFE-SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           +  V N+LI MYA+S  +E A +  +      N+VS  +M+D Y +    E+A  +  E+
Sbjct: 177 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 236

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              GV  + +TF+S++ G +    + +G Q+HA++IK+    +  + + L+ MY +C  +
Sbjct: 237 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCGLI 296

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             + Q+F E+E R  I+W ++I  FA+HG    A++ F +M+  GI+PN I ++++L+AC
Sbjct: 297 SLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLTAC 356

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SHAGL+ EG K+F SM + HGI  + EHY+C++D  GR+G L EA +FI  MP+  +   
Sbjct: 357 SHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNAYG 416

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W + LGACR+ G  ELG+ AA+ +++ +P +   H+ LS +YAS G WE V  +RK M++
Sbjct: 417 WCSLLGACRMRGSKELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVKAVRKLMRD 476

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             + K  G SW++++ K H F   + SHP+  +IY +L++L  +IKE GY+PDT+F+   
Sbjct: 477 SRIKKLPGFSWVDSNKKTHVFGSEDWSHPQQKDIYEKLEELTTRIKEEGYIPDTSFLPCN 536

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           LE+  K + L  HSE+IAVAF LIS   +KPI V KNLR+C DCHTA K+I  V  R+I+
Sbjct: 537 LEDIAKERILRYHSERIAVAFALISMPATKPIIVKKNLRICIDCHTAFKFICKVERRDII 596

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD++RFHH  +G+CSC DYW
Sbjct: 597 VRDNSRFHHFVNGRCSCGDYW 617



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 183/351 (52%), Gaps = 16/351 (4%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H +  R   +    + ++L  +YSKCG L+EA ++F  M  K D V+W++MI  Y   G
Sbjct: 63  LHCVGVRLGFDTELFVASNLADMYSKCGLLSEACRVFDQMPQK-DAVAWTAMIDGYAKNG 121

Query: 160 KQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
               A+  F +M   G    +++ F +V+ A    ++  +   I+  + K G F+ +V V
Sbjct: 122 SLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAG-FELEVAV 180

Query: 219 GCALIDMFVKGSVDLESAYKVFD-KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
             ALIDM+ K S+D+ESA +V        N V  T MI    +  C  +A+ +++++   
Sbjct: 181 RNALIDMYAK-SMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVELRRQ 239

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           G  P+ FT S ++  C+   L   G QLH+  I+T L  D  VG +LVDMY KC   G +
Sbjct: 240 GVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKC---GLI 296

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
             S ++F+ +     ++W A+I  + Q  G  +EA++ F  MI   + PNH  F S+L A
Sbjct: 297 SLSMQLFNEIEYRTDIAWNAVINVFAQH-GHGREAIQAFDRMIYSGIRPNHIAFVSLLTA 355

Query: 398 C--GNLLDSNVAEQVYTHAVKRGRALD--DCVGNSLISMYARSGRMEDARK 444
           C    L+D  +    Y +++K    ++  +   + +I  Y R+GR+++A K
Sbjct: 356 CSHAGLVDEGLK---YFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYK 403



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 210/427 (49%), Gaps = 14/427 (3%)

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
           +R+ VSW++++S         DA+  F  M   G  P  +  S+  RA +       G  
Sbjct: 3   RRNAVSWTTLVSGLSQNLMHADALAAFAAMRRAGVAPTRFALSSAARAAAALGAPLPGAQ 62

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++   ++ G FD+++ V   L DM+ K  + L  A +VFD+M +K+ V WT MI    + 
Sbjct: 63  LHCVGVRLG-FDTELFVASNLADMYSKCGL-LSEACRVFDQMPQKDAVAWTAMIDGYAKN 120

Query: 262 GCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
           G    A+  F DM   G +  D+     V+SA   L+     K +H    + G  L+V V
Sbjct: 121 GSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFELEVAV 180

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             +L+DMYAK      V+ + +V    +D    NV+S T++I GY+++   + EA+ ++ 
Sbjct: 181 RNALIDMYAKSM---DVESASRVLK--IDPGGWNVVSGTSMIDGYIETDCVE-EALVIYV 234

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           ++ +  V PN FTF+S++K C          Q++   +K     D  VG++L+ MY + G
Sbjct: 235 ELRRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLIRDSFVGSTLVDMYGKCG 294

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            +  + + F  +  +  +++N +++ +A++ +  +A +    +  +G+  +   F SLL+
Sbjct: 295 LISLSMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLLT 354

Query: 498 GASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NV 555
             S  G + +G +    + ++ G E     Y+ +I  Y R   ++ A++   EM  + N 
Sbjct: 355 ACSHAGLVDEGLKYFYSMKEAHGIEPKEEHYSCIIDTYGRAGRLDEAYKFISEMPIKPNA 414

Query: 556 ISWTSMI 562
             W S++
Sbjct: 415 YGWCSLL 421



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 95/398 (23%), Positives = 179/398 (44%), Gaps = 53/398 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKG-NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           +  +G ++ A+ +   M ++G    D   +  +L +    ++  L K +H  +T++  E 
Sbjct: 117 YAKNGSLEAAVLSFRDMKREGLVGADQHVFCSVLSASGGLKDGWLSKSIHCCVTKAGFEL 176

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              + N+LI +Y+K  D+  A+++ K      ++VS +SMI  Y+      +A+ ++VE+
Sbjct: 177 EVAVRNALIDMYAKSMDVESASRVLKIDPGGWNVVSGTSMIDGYIETDCVEEALVIYVEL 236

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
              G  PNE+ FS++I+ C+    +  G  ++  ++K      D  VG  L+DM+ K G 
Sbjct: 237 RRQGVEPNEFTFSSMIKGCAMQALLEQGAQLHAQVIKTDLI-RDSFVGSTLVDMYGKCGL 295

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           + L  + ++F+++  +  + W  +I    Q G  R+AI+ F  MI SG  P+      ++
Sbjct: 296 ISL--SMQLFNEIEYRTDIAWNAVINVFAQHGHGREAIQAFDRMIYSGIRPNHIAFVSLL 353

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +ACS                                        G VD+  K F  M + 
Sbjct: 354 TACSHA--------------------------------------GLVDEGLKYFYSMKEA 375

Query: 351 NVMS-----WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           + +      ++ II  Y ++G  D EA K  S+M    + PN + + S+L AC  +  S 
Sbjct: 376 HGIEPKEEHYSCIIDTYGRAGRLD-EAYKFISEM---PIKPNAYGWCSLLGAC-RMRGSK 430

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
              +V    + +    +  +  SL  +YA  G+ ED +
Sbjct: 431 ELGEVAAQNLMKLEPGNTGIHVSLSGIYASLGQWEDVK 468


>gi|224138422|ref|XP_002322810.1| predicted protein [Populus trichocarpa]
 gi|222867440|gb|EEF04571.1| predicted protein [Populus trichocarpa]
          Length = 562

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 217/527 (41%), Positives = 338/527 (64%), Gaps = 1/527 (0%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G +D + KVFD ML+ NV +W A+++G +Q    ++  + LF +M +    P+ FT  SV
Sbjct: 37  GDLDSAIKVFDEMLERNVATWNAMVSGLIQFE-FNENGLFLFREMHELGFLPDEFTLGSV 95

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L+ C  L  S   +QV+ + +K G   +  VG+SL  MY +SG + +  K  +++  +N+
Sbjct: 96  LRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKVIKAMRIRNV 155

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           V++NT++   A+N + E   +L + ++ +G+     T  S++S ++ +  + +G+QIHA 
Sbjct: 156 VAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAE 215

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
            IK+G  S   + ++LISMYS+C  +E + +   + E  + + W+SMI  +  HG    A
Sbjct: 216 AIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSMIAAYGFHGRGEEA 275

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           + +F +M  +G+  N +T++++L ACSH GL  +G   F+ M +++G+  R+EHY C+VD
Sbjct: 276 VHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYGLKPRLEHYTCVVD 335

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           LLGRSG L EA   IRSMPL ADV++W+T L ACR+H + ++    AE IL  +PQD A 
Sbjct: 336 LLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIHRNADMATRTAEEILRLNPQDSAT 395

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           ++LLSN++ASA  W+ V+ +R  M++RN+ KE G SW+E  N+V +F +G+ SHP + EI
Sbjct: 396 YVLLSNIHASAKRWKDVSKVRTTMRDRNVKKEPGVSWLEVKNRVFQFSMGDKSHPMSEEI 455

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRV 814
              L +L  ++K  GY+PDT  V H+ + E+K   L  HSEK+A+AFGL++     PIRV
Sbjct: 456 DLYLKELMEEMKLRGYVPDTATVFHDTDSEEKENSLVNHSEKLAIAFGLMNIPPGSPIRV 515

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            KNLR+C DCH AIK IS +  REI++RD++RFHH K GKCSC DYW
Sbjct: 516 MKNLRICSDCHVAIKLISDINNREIIVRDTSRFHHFKHGKCSCGDYW 562



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/350 (30%), Positives = 177/350 (50%), Gaps = 9/350 (2%)

Query: 224 DMFVKGSV---DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           ++ + G V   DL+SA KVFD+M E+N   W  M++   Q     + + LF +M   GFL
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD FTL  V+  C+ L    +GKQ+H++ ++ G   ++ VG SL  MY K    GS+ + 
Sbjct: 87  PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMK---SGSLGEG 143

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            KV   M   NV++W  +I G  Q+G  +   + L++ M    + P+  T  SV+ +   
Sbjct: 144 EKVIKAMRIRNVVAWNTLIAGNAQNGHFEG-VLDLYNMMKMSGLRPDKITLVSVISSSAE 202

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L      +Q++  A+K G      V +SLISMY++ G +ED+ KA       + V +++M
Sbjct: 203 LATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCEHPDSVLWSSM 262

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSG 519
           + AY  +   E+A  L  ++E  G+G +  TF SLL   S  G   KG      ++ K G
Sbjct: 263 IAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLKEKGMGFFKLMVEKYG 322

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            +     Y  ++ +  R   ++ A  + + M  + +V+ W ++++    H
Sbjct: 323 LKPRLEHYTCVVDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIH 372



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 114/373 (30%), Positives = 190/373 (50%), Gaps = 23/373 (6%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI+ + + GDL+ A K+F  M  +R++ +W++M+S  +      + + +F EM ELGF
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEM-LERNVATWNAMVSGLIQFEFNENGLFLFREMHELGF 85

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+E+   +V+R C+       G  ++ ++LK GY + ++ VG +L  M++K S  L   
Sbjct: 86  LPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGY-EFNLVVGSSLAHMYMK-SGSLGEG 143

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            KV   M  +N V W  +I    Q G     + L+  M +SG  PD+ TL  V+S+ +EL
Sbjct: 144 EKVIKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAEL 203

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+Q+H+ AI+ G    V V  SL+ MY+KC   G ++DS K        + + W+
Sbjct: 204 ATLFQGQQIHAEAIKAGANSAVAVLSSLISMYSKC---GCLEDSMKALLDCEHPDSVLWS 260

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ------- 409
           ++I  Y    GR +EAV LF  M Q  +  N  TF S+L AC +   + + E+       
Sbjct: 261 SMIAAY-GFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSH---NGLKEKGMGFFKL 316

Query: 410 -VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN 467
            V  + +K       CV    + +  RSG +++A     S+  E ++V + T++ A   +
Sbjct: 317 MVEKYGLKPRLEHYTCV----VDLLGRSGCLDEAEAMIRSMPLEADVVIWKTLLSACRIH 372

Query: 468 LNSEKAFELLHEI 480
            N++ A     EI
Sbjct: 373 RNADMATRTAEEI 385



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 70/277 (25%), Positives = 140/277 (50%), Gaps = 3/277 (1%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI+ + + G ++ A K F+ + E+N+ ++N MV    +   +E    L  E+ + G  
Sbjct: 27  NILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGFL 86

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              +T  S+L G + + A   G+Q+HA ++K G+E N  + ++L  MY +  ++    +V
Sbjct: 87  PDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEGEKV 146

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            K M  RNV++W ++I G A++G     L+++  M   G++P+ IT ++V+S+ +    +
Sbjct: 147 IKAMRIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATL 206

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            +G +   +   + G    +   + ++ +  + G L ++++ +       D ++W + + 
Sbjct: 207 FQG-QQIHAEAIKAGANSAVAVLSSLISMYSKCGCLEDSMKALLDCE-HPDSVLWSSMIA 264

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           A   HG  E   H  E  +EQ+         LS LYA
Sbjct: 265 AYGFHGRGEEAVHLFEQ-MEQEGLGGNDVTFLSLLYA 300



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 77/308 (25%), Positives = 137/308 (44%), Gaps = 16/308 (5%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           +  +F    M + G  PD  T   +L+ C   R  + GK VH+ + +   E N V+ +SL
Sbjct: 71  ENGLFLFREMHELGFLPDEFTLGSVLRGCAGLRASYAGKQVHAYVLKYGYEFNLVVGSSL 130

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
             +Y K G L E  K+ K+M   R++V+W+++I+     G     + ++  M   G  P+
Sbjct: 131 AHMYMKSGSLGEGEKVIKAM-RIRNVVAWNTLIAGNAQNGHFEGVLDLYNMMKMSGLRPD 189

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           +    +VI + +    +  G  I+   +K G  +S V V  +LI M+ K    LE + K 
Sbjct: 190 KITLVSVISSSAELATLFQGQQIHAEAIKAGA-NSAVAVLSSLISMYSKCGC-LEDSMKA 247

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
                  ++V W+ MI      G   +A+ LF  M   G   +  T   ++ ACS   L 
Sbjct: 248 LLDCEHPDSVLWSSMIAAYGFHGRGEEAVHLFEQMEQEGLGGNDVTFLSLLYACSHNGLK 307

Query: 300 TSGK-----QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVM 353
             G       +  + ++  L    CV    VD+  +    G +D++  +   M L+ +V+
Sbjct: 308 EKGMGFFKLMVEKYGLKPRLEHYTCV----VDLLGR---SGCLDEAEAMIRSMPLEADVV 360

Query: 354 SWTAIITG 361
            W  +++ 
Sbjct: 361 IWKTLLSA 368



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 71/139 (51%), Gaps = 1/139 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  +  +   ++M   G  PD  T   ++ S         G+ +H+   ++       
Sbjct: 167 QNGHFEGVLDLYNMMKMSGLRPDKITLVSVISSSAELATLFQGQQIHAEAIKAGANSAVA 226

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +L+SLIS+YSKCG L ++ K      +  D V WSSMI++Y   G+  +A+H+F +M + 
Sbjct: 227 VLSSLISMYSKCGCLEDSMKALLDCEHP-DSVLWSSMIAAYGFHGRGEEAVHLFEQMEQE 285

Query: 175 GFCPNEYCFSAVIRACSNT 193
           G   N+  F +++ ACS+ 
Sbjct: 286 GLGGNDVTFLSLLYACSHN 304



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/150 (28%), Positives = 77/150 (51%), Gaps = 4/150 (2%)

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +N LI+ + +  ++++A +VF EM +RNV +W +M++G  +  F    L +F +M   G 
Sbjct: 26  HNILINGHVQHGDLDSAIKVFDEMLERNVATWNAMVSGLIQFEFNENGLFLFREMHELGF 85

Query: 587 KPNGITYIAVLSACSHAGL-ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
            P+  T  +VL  C  AGL  S   K   +   ++G    +   + +  +  +SGSL E 
Sbjct: 86  LPDEFTLGSVLRGC--AGLRASYAGKQVHAYVLKYGYEFNLVVGSSLAHMYMKSGSLGEG 143

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            + I++M +  +V+ W T +     +G  E
Sbjct: 144 EKVIKAMRIR-NVVAWNTLIAGNAQNGHFE 172


>gi|449433569|ref|XP_004134570.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Cucumis sativus]
          Length = 705

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/658 (36%), Positives = 378/658 (57%), Gaps = 37/658 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  + ++F+ +     + W  +I   T  G P  ++  F+ M+ SG  PD      V+ +
Sbjct: 56  LHDSLRLFNTIHFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKS 115

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC--------------------- 331
           C+ L     G+ LH + IR GL  D+  G +L++MY+K                      
Sbjct: 116 CALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRFLEESGRQRLGAGEVFDEMT 175

Query: 332 -------TVDGSVDDS-RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                  TV    +DS RK+F+ M + +++SW  II G  ++G  + E +++  +M    
Sbjct: 176 ERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYE-ETLRMIREMGGAN 234

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + P+ FT +SVL      +D +  ++++  ++++G   D  V +SLI MYA+  R+ D+ 
Sbjct: 235 LKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAKCTRVADSC 294

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           + F  L E++ +S+N+++    +N   ++      ++    +   +Y+F+S++   + + 
Sbjct: 295 RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSYSFSSIMPACAHLT 354

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
            +  G+Q+H  I ++GF+ N  I ++L+ MY++C N+  A Q+F  M  R+++SWT+MI 
Sbjct: 355 TLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMRLRDMVSWTAMIM 414

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           G A HG A  A+E+F +M  +GIK       AVL+ACSH GL+ E WK+F SM  + GI 
Sbjct: 415 GCALHGQAPDAIELFEQMETEGIK-------AVLTACSHGGLVDEAWKYFNSMTRDFGIA 467

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             +EHYA + DLLGR+G L EA +FI  M +     +W T L ACRVH + ++ +  A  
Sbjct: 468 PGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSACRVHKNIDMAEKVANR 527

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           ILE DP +  A+ILL+N+Y++A  W+  A  R  M+   + K   CSWIE  NKV+ F  
Sbjct: 528 ILEVDPNNTGAYILLANIYSAARRWKEAAKWRASMRRIGIRKTPACSWIEVKNKVYAFMA 587

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+ SHP   +I   ++ L   +++ GY+PDT+ V H++EEEQK   +  HSE++A+ FG+
Sbjct: 588 GDESHPCYEKIREAMEVLVELMEKEGYVPDTSEVHHDVEEEQKKYLVCSHSERLAIVFGI 647

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           I+T     IRV KNLRVC DCHTA K+IS + GREIV+RD++RFHH K+G CSC DYW
Sbjct: 648 INTPAGMTIRVTKNLRVCTDCHTATKFISKIVGREIVVRDNSRFHHFKNGTCSCGDYW 705



 Score =  182 bits (462), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 210/395 (53%), Gaps = 37/395 (9%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YS    L+++ ++F ++ +    ++W S+I  Y + G    ++  F+ ML  G  P+  
Sbjct: 49  IYSHINLLHDSLRLFNTI-HFPPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHN 107

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK------------G 229
            F +V+++C+   ++ +G  ++G++++ G  D D+  G AL++M+ K            G
Sbjct: 108 VFPSVLKSCALLMDLNLGESLHGYIIRVG-LDFDLYTGNALMNMYSKLRFLEESGRQRLG 166

Query: 230 SVDL-------------------ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
           + ++                   +S  K+F+ M EK+ V W  +I    + G   + +R+
Sbjct: 167 AGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEKDLVSWNTIIAGNARNGLYEETLRM 226

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
             +M  +   PD FTLS V+   +E    + GK++H  +IR GL  D+ V  SL+DMYAK
Sbjct: 227 IREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLIDMYAK 286

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           CT    V DS +VF  + + + +SW +II G VQ+G  D E ++ F  M+  ++ P  ++
Sbjct: 287 CT---RVADSCRVFTLLTERDGISWNSIIAGCVQNGLFD-EGLRFFRQMLMAKIKPKSYS 342

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F+S++ AC +L   ++ +Q++ +  + G   +  + +SL+ MYA+ G +  A++ F+ + 
Sbjct: 343 FSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKCGNIRTAKQIFDRMR 402

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            +++VS+  M+   A +  +  A EL  ++E  G+
Sbjct: 403 LRDMVSWTAMIMGCALHGQAPDAIELFEQMETEGI 437



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 114/410 (27%), Positives = 203/410 (49%), Gaps = 53/410 (12%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G +PD + +  +LKSC    + +LG+ +H  + R  L+ +    N+L+++YSK   
Sbjct: 97  MLASGLYPDHNVFPSVLKSCALLMDLNLGESLHGYIIRVGLDFDLYTGNALMNMYSKLRF 156

Query: 129 LNEA--------------------------------NKIFKSMGNKRDIVSWSSMISSYV 156
           L E+                                 KIF+ M  K D+VSW+++I+   
Sbjct: 157 LEESGRQRLGAGEVFDEMTERTRSVRTVSVLSEDSVRKIFEMMPEK-DLVSWNTIIAGNA 215

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G   + + M  EM      P+ +  S+V+   +   +++ G  I+G  ++ G  D+D+
Sbjct: 216 RNGLYEETLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQG-LDADI 274

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  +LIDM+ K +   +S  +VF  +TE++ + W  +I  C Q G   + +R F  M++
Sbjct: 275 YVASSLIDMYAKCTRVADSC-RVFTLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLM 333

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +   P  ++ S ++ AC+ L     GKQLH +  R G   ++ +  SLVDMYAKC   G+
Sbjct: 334 AKIKPKSYSFSSIMPACAHLTTLHLGKQLHGYITRNGFDENIFIASSLVDMYAKC---GN 390

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +  ++++FDRM   +++SWTA+I G     G+  +A++LF  M    +        +VL 
Sbjct: 391 IRTAKQIFDRMRLRDMVSWTAMIMGCALH-GQAPDAIELFEQMETEGI-------KAVLT 442

Query: 397 AC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
           AC  G L+D       Y +++ R   +   V +  ++  +  R+GR+E+A
Sbjct: 443 ACSHGGLVDE---AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEA 489



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 90/350 (25%), Positives = 162/350 (46%), Gaps = 45/350 (12%)

Query: 65  TLDLMTQKGN---HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           TL ++ + G     PD  T S +L     + +   GK +H    R  L+ +  + +SLI 
Sbjct: 223 TLRMIREMGGANLKPDSFTLSSVLPLIAENVDISRGKEIHGCSIRQGLDADIYVASSLID 282

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y+KC  + ++ ++F ++  +RD +SW+S+I+  V  G   + +  F +ML     P  Y
Sbjct: 283 MYAKCTRVADSCRVF-TLLTERDGISWNSIIAGCVQNGLFDEGLRFFRQMLMAKIKPKSY 341

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            FS+++ AC++   + +G  ++G++ + G FD ++ +  +L+DM+ K   ++ +A ++FD
Sbjct: 342 SFSSIMPACAHLTTLHLGKQLHGYITRNG-FDENIFIASSLVDMYAKCG-NIRTAKQIFD 399

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE------ 295
           +M  ++ V WT MI  C   G   DAI LF  M   G       +  V++ACS       
Sbjct: 400 RMRLRDMVSWTAMIMGCALHGQAPDAIELFEQMETEG-------IKAVLTACSHGGLVDE 452

Query: 296 -----------------LELFTSGKQLHSWAIRTGLALDVCVGCSL-------VDMYAKC 331
                            +E + +   L   A R   A D   G  +         + + C
Sbjct: 453 AWKYFNSMTRDFGIAPGVEHYAAVSDLLGRAGRLEEAYDFICGMHIGPTGSIWATLLSAC 512

Query: 332 TVDGSVDDSRKVFDRML--DHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
            V  ++D + KV +R+L  D N      ++     +  R KEA K  + M
Sbjct: 513 RVHKNIDMAEKVANRILEVDPNNTGAYILLANIYSAARRWKEAAKWRASM 562



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 28/109 (25%), Positives = 59/109 (54%), Gaps = 3/109 (2%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS-MYSRCANVEAAFQVFKEMED 552
           +LL    SI +  + +Q+HA+++K  F+++     +L+  +YS    +  + ++F  +  
Sbjct: 11  ALLRNPLSIKSRSQAQQLHAQVLK--FQASSLCNLSLLLSIYSHINLLHDSLRLFNTIHF 68

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
              ++W S+I  +  HG   ++L  F  MLA G+ P+   + +VL +C+
Sbjct: 69  PPALAWKSVIRCYTSHGLPHQSLGSFIGMLASGLYPDHNVFPSVLKSCA 117


>gi|302763721|ref|XP_002965282.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
 gi|300167515|gb|EFJ34120.1| hypothetical protein SELMODRAFT_83339 [Selaginella moellendorffii]
          Length = 721

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 259/695 (37%), Positives = 384/695 (55%), Gaps = 36/695 (5%)

Query: 183 FSAVIRACSNTENVAIGH--IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           F+A IR+C ++ +V+I H  I    L    Y ++       L+ + +     L  A  +F
Sbjct: 47  FAAAIRSCKDSNSVSIIHQKITRAGLGSSAYLNN-------LLVLMLAKHGSLCEARSIF 99

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D +  KN   W ++I+     G P  A+ LF  M +    P   T +  +SACS L    
Sbjct: 100 DAIQHKNIFSWNIIISAYAHRGHPSTALHLFAKMDVP---PTAMTFATALSACSSLGDLQ 156

Query: 301 SGKQLH-----SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
            G+++H     S  IR  + LD     ++  MYAKC   G +  ++ VFDR+   NV+SW
Sbjct: 157 RGREIHARIKASRGIRPSVILDT----AIFSMYAKC---GDLSTAKSVFDRIPAKNVVSW 209

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I  Y QSG    +A+ LF  M +  V P   TF  VL AC    D    E+++   V
Sbjct: 210 NALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACN---DVTSLEKIHARIV 266

Query: 416 KRGRALD--DC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + G   D  D  V N+L++MYA+ G +E AR  F  +  ++ VS N M+  +A+    ++
Sbjct: 267 ETGLQFDVRDVGVQNALLNMYAKCGSLEVARDIFRKMQRRDQVSMNVMIATFAQQGLGKE 326

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN---- 528
           + ++  E++  G+     TFAS+++  S  GA+  G++IH R+++       C+ N    
Sbjct: 327 SIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVE 386

Query: 529 -ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
            AL+SMY +C  +E A  VFK M  +N +SW +M+   A  G    A         +G++
Sbjct: 387 TALVSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVE 446

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            +  ++I+VL ACSH+G++   + HF+ M  +  +V   E+Y CMVDLL RSG L +A E
Sbjct: 447 LDSASFISVLIACSHSGMLEVAYDHFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADE 506

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            + SMP S D + WRT LG CRV G  E    AAE     +PQ+ A + LLS+LY++ G 
Sbjct: 507 LMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNLEPQNTAPYTLLSSLYSATGK 566

Query: 708 WEYVANIRKRMKERNLIK-EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            + +  +R  MKER L K   G S IE   +VH+F  G++SHP+  +I  ELD L +++K
Sbjct: 567 KDELVELRSSMKERGLRKLVPGRSVIEVHGRVHEFVAGDSSHPQIDKILRELDILNVELK 626

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           + G++P T+ V+H+L+ E K + L  HSEK+AVAFGLIST    P+ V KNLRVC DCH 
Sbjct: 627 QAGFVPSTDGVVHDLKTEDKEEILALHSEKLAVAFGLISTKSGIPLLVLKNLRVCSDCHG 686

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK IS +  R I +RD+NRFH  + G CSC DYW
Sbjct: 687 AIKLISKLRSRVITVRDANRFHRFQSGTCSCGDYW 721



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 152/559 (27%), Positives = 268/559 (47%), Gaps = 36/559 (6%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           D+++  ++SC  S +     ++H  +TR+ L  ++ + N L+ + +K G L EA  IF +
Sbjct: 45  DSFAAAIRSCKDSNSV---SIIHQKITRAGLGSSAYLNNLLVLMLAKHGSLCEARSIFDA 101

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           + +K +I SW+ +IS+Y +RG    A+H+F +M      P    F+  + ACS+  ++  
Sbjct: 102 IQHK-NIFSWNIIISAYAHRGHPSTALHLFAKM---DVPPTAMTFATALSACSSLGDLQR 157

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  I+  +         V +  A+  M+ K   DL +A  VFD++  KN V W  +I   
Sbjct: 158 GREIHARIKASRGIRPSVILDTAIFSMYAKCG-DLSTAKSVFDRIPAKNVVSWNALIAAY 216

Query: 259 TQLG-CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL- 316
            Q G     A+ LF  M   G  P R T  GV+ AC+++   TS +++H+  + TGL   
Sbjct: 217 AQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDV---TSLEKIHARIVETGLQFD 273

Query: 317 --DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             DV V  +L++MYAKC   GS++ +R +F +M   + +S   +I  + Q  G  KE+++
Sbjct: 274 VRDVGVQNALLNMYAKC---GSLEVARDIFRKMQRRDQVSMNVMIATFAQQ-GLGKESIQ 329

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN-----SL 429
           +F +M    +  +  TFASV+ AC         ++++   V+       C+ N     +L
Sbjct: 330 VFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCCLPNVVVETAL 389

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           +SMY + G +E A+  F+++  KN VS+N M+ A A     ++A   L      GV   +
Sbjct: 390 VSMYGKCGTLEQAKAVFKAMTTKNSVSWNAMLAACAHQGQGDEAAAFLRAAACEGVELDS 449

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVF 547
            +F S+L   S  G +      H +++ S F+       Y  ++ + +R   +  A ++ 
Sbjct: 450 ASFISVLIACSHSGMLEVAYD-HFQLMLSDFDLVPAAENYRCMVDLLARSGRLGDADELM 508

Query: 548 KEME-DRNVISWTSMITGFAKHGF---AARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
             M    + I+W +++ G    G    AA A E  + +     +P       +LS+   A
Sbjct: 509 NSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQAFNL-----EPQNTAPYTLLSSLYSA 563

Query: 604 GLISEGWKHFRSMYDEHGI 622
               +     RS   E G+
Sbjct: 564 TGKKDELVELRSSMKERGL 582



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 219/447 (48%), Gaps = 41/447 (9%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK-LEPNSVILNSLISLYSKCGDLNEANK 134
           P   T++  L +C    +   G+ +H+ +  S+ + P+ ++  ++ S+Y+KCGDL+ A  
Sbjct: 137 PTAMTFATALSACSSLGDLQRGREIHARIKASRGIRPSVILDTAIFSMYAKCGDLSTAKS 196

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRG-KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           +F  +  K ++VSW+++I++Y   G     A+ +F +M E G  P    F  V+ AC++ 
Sbjct: 197 VFDRIPAK-NVVSWNALIAAYAQSGHSHHQALDLFEKMAEHGVRPCRATFVGVLGACNDV 255

Query: 194 ENVAIGHIIYGFLLKCGY-FD-SDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVG 250
            ++     I+  +++ G  FD  DV V  AL++M+ K GS  LE A  +F KM  ++ V 
Sbjct: 256 TSL---EKIHARIVETGLQFDVRDVGVQNALLNMYAKCGS--LEVARDIFRKMQRRDQVS 310

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
             +MI    Q G  +++I++F +M L G   D  T + V++ACS       GK++H   +
Sbjct: 311 MNVMIATFAQQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVV 370

Query: 311 RTGLALDVC-----VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
              L    C     V  +LV MY KC   G+++ ++ VF  M   N +SW A++      
Sbjct: 371 EPVLGRKCCLPNVVVETALVSMYGKC---GTLEQAKAVFKAMTTKNSVSWNAMLAACAHQ 427

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G  D+ A  L +   +G V  +  +F SVL AC +   S + E  Y H        D   
Sbjct: 428 GQGDEAAAFLRAAACEG-VELDSASFISVLIACSH---SGMLEVAYDHFQLMLSDFDLVP 483

Query: 426 G----NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTM-----VDAYAKNLNS--EKA 473
                  ++ + ARSGR+ DA +   S+ F  + +++ T+     V    +N  S  E+A
Sbjct: 484 AAENYRCMVDLLARSGRLGDADELMNSMPFSPDAIAWRTLLGGCRVQGSLENAASAAEQA 543

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGAS 500
           F L  +       T+ YT  S L  A+
Sbjct: 544 FNLEPQ------NTAPYTLLSSLYSAT 564



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 77/158 (48%), Gaps = 6/158 (3%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS-----LLTRSKL 109
             G  +++I     M  +G   D  T++ ++ +C        GK +H      +L R   
Sbjct: 320 QQGLGKESIQVFREMDLEGLPQDDTTFASVITACSCCGALEFGKRIHKRVVEPVLGRKCC 379

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
            PN V+  +L+S+Y KCG L +A  +FK+M  K   VSW++M+++  ++G+  +A     
Sbjct: 380 LPNVVVETALVSMYGKCGTLEQAKAVFKAMTTKNS-VSWNAMLAACAHQGQGDEAAAFLR 438

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
                G   +   F +V+ ACS++  + + +  +  +L
Sbjct: 439 AAACEGVELDSASFISVLIACSHSGMLEVAYDHFQLML 476


>gi|226492710|ref|NP_001145953.1| uncharacterized protein LOC100279479 [Zea mays]
 gi|219885099|gb|ACL52924.1| unknown [Zea mays]
          Length = 530

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 219/535 (40%), Positives = 336/535 (62%), Gaps = 5/535 (0%)

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MY KC   G+V D+R VFD+M   +V+SWT +I GY Q+     EA+ L  DM++ +  P
Sbjct: 1   MYCKC---GAVSDARHVFDKMPSRDVVSWTYLIAGYAQNY-MPAEAIGLLPDMLRARFRP 56

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N FTF S+LKA G     ++ EQ++  AVK     D  VG++L+ MYAR  +M+ A   F
Sbjct: 57  NGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCEQMDMAIMVF 116

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + L  KN VS+N ++  +A+  + E       E++  G G + +T++S+ S  + IGA+ 
Sbjct: 117 DRLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALE 176

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G  +HA +IKSG +    + N ++ MY++  ++  A +VF  M+ R++++W +M+T  A
Sbjct: 177 QGRWVHAHLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALA 236

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           ++G    A+  F ++   GI+ N IT+++VL+ACSH GL+ EG KH+  M  ++ +   +
Sbjct: 237 QYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEG-KHYFDMMKDYNVQPEI 295

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           +HY   VDLLGR+G L EAL F+  MP+     VW   LGACR+H + ++G++AA+ + E
Sbjct: 296 DHYVSFVDLLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMHKNAKMGQYAADHVFE 355

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            DP D    +LL N+YAS G W   A +RK MK   + KE  CSW++ +N VH F   + 
Sbjct: 356 LDPDDTGPPVLLYNIYASTGKWNDAARVRKMMKATGVKKEPACSWVQIENSVHMFVADDD 415

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           +HPK+ +IY   +++ ++IK+ GY+P+T  VL  + E+++   L  HSEKIA+AF LI+ 
Sbjct: 416 THPKSGDIYRMWEEINMRIKKAGYVPNTAHVLLHINEQERETKLKYHSEKIALAFALINM 475

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
                IR+ KN+R+CGDCH+A KY+S V  REIV+RD+NRFHH  +G CSC DYW
Sbjct: 476 PAGASIRIMKNIRICGDCHSAFKYVSKVFKREIVVRDTNRFHHFSEGSCSCGDYW 530



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/337 (29%), Positives = 173/337 (51%), Gaps = 5/337 (1%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A  VFDKM  ++ V WT +I    Q   P +AI L  DM+ + F P+ FT + ++ A
Sbjct: 8   VSDARHVFDKMPSRDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGFTFTSLLKA 67

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
                  + G+Q+H+ A++     DV VG +L+DMYA+C     +D +  VFDR++  N 
Sbjct: 68  TGACGGCSIGEQMHALAVKYNWDEDVYVGSALLDMYARCE---QMDMAIMVFDRLVSKNE 124

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW A+I G+ +    +   +K F++M +      HFT++S+  A   +        V+ 
Sbjct: 125 VSWNALIAGFARKADGETTLMK-FAEMQRNGFGATHFTYSSMFSAFARIGALEQGRWVHA 183

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +K G+ L   VGN+++ MYA+SG M DARK F+ + +++LV++NTM+ A A+    ++
Sbjct: 184 HLIKSGQKLTAFVGNTMLGMYAKSGSMVDARKVFDRMDKRDLVTWNTMLTALAQYGLGKE 243

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A     EI   G+  +  TF S+L+  S  G + +G+     +     +     Y + + 
Sbjct: 244 AVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVKEGKHYFDMMKDYNVQPEIDHYVSFVD 303

Query: 533 MYSRCANV-EAAFQVFKEMEDRNVISWTSMITGFAKH 568
           +  R   + EA   VFK   +     W +++     H
Sbjct: 304 LLGRAGLLKEALIFVFKMPMEPTAAVWGALLGACRMH 340



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/277 (32%), Positives = 150/277 (54%), Gaps = 7/277 (2%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y KCG +++A  +F  M + RD+VSW+ +I+ Y       +AI +  +ML   F PN +
Sbjct: 1   MYCKCGAVSDARHVFDKMPS-RDVVSWTYLIAGYAQNYMPAEAIGLLPDMLRARFRPNGF 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F+++++A       +IG  ++   +K  + D DV VG AL+DM+ +    ++ A  VFD
Sbjct: 60  TFTSLLKATGACGGCSIGEQMHALAVKYNW-DEDVYVGSALLDMYARCE-QMDMAIMVFD 117

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           ++  KN V W  +I    +       +  F +M  +GF    FT S + SA + +     
Sbjct: 118 RLVSKNEVSWNALIAGFARKADGETTLMKFAEMQRNGFGATHFTYSSMFSAFARIGALEQ 177

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+ +H+  I++G  L   VG +++ MYAK    GS+ D+RKVFDRM   ++++W  ++T 
Sbjct: 178 GRWVHAHLIKSGQKLTAFVGNTMLGMYAK---SGSMVDARKVFDRMDKRDLVTWNTMLTA 234

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             Q  G  KEAV  F ++ +  +  N  TF SVL AC
Sbjct: 235 LAQY-GLGKEAVAHFEEIRKCGIQLNQITFLSVLTAC 270



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/244 (25%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +AI  L  M +    P+  T++ LLK+        +G+ +H+L  +   + +  + ++L+
Sbjct: 41  EAIGLLPDMLRARFRPNGFTFTSLLKATGACGGCSIGEQMHALAVKYNWDEDVYVGSALL 100

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y++C  ++ A  +F  + +K + VSW+++I+ +  +      +  F EM   GF    
Sbjct: 101 DMYARCEQMDMAIMVFDRLVSKNE-VSWNALIAGFARKADGETTLMKFAEMQRNGFGATH 159

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + +S++  A +    +  G  ++  L+K G       VG  ++ M+ K S  +  A KVF
Sbjct: 160 FTYSSMFSAFARIGALEQGRWVHAHLIKSGQ-KLTAFVGNTMLGMYAK-SGSMVDARKVF 217

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+M +++ V W  M+T   Q G  ++A+  F ++   G   ++ T   V++ACS   L  
Sbjct: 218 DRMDKRDLVTWNTMLTALAQYGLGKEAVAHFEEIRKCGIQLNQITFLSVLTACSHGGLVK 277

Query: 301 SGKQ 304
            GK 
Sbjct: 278 EGKH 281


>gi|15233584|ref|NP_193218.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274931|sp|O23337.1|PP311_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g14820
 gi|2244839|emb|CAB10261.1| hypothetical protein [Arabidopsis thaliana]
 gi|7268228|emb|CAB78524.1| hypothetical protein [Arabidopsis thaliana]
 gi|332658106|gb|AEE83506.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 722

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 236/635 (37%), Positives = 367/635 (57%), Gaps = 41/635 (6%)

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
           PR  I  +  +   G   D+F+   ++ A S++     G +LH  A +     D  V   
Sbjct: 92  PRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETG 151

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
            +DMYA C   G ++ +R VFD M   +V++W  +I  Y + G  D EA KLF +M    
Sbjct: 152 FMDMYASC---GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD-EAFKLFEEMKDSN 207

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA--------- 434
           V P+     +++ ACG   +      +Y   ++    +D  +  +L++MYA         
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267

Query: 435 ----------------------RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                                 + GR++DA+  F+   +K+LV + TM+ AY ++   ++
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  +  E+  +G+     +  S++S  +++G + K + +H+ I  +G ES   I NALI+
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++C  ++A   VF++M  RNV+SW+SMI   + HG A+ AL +F +M  + ++PN +T
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VL  CSH+GL+ EG K F SM DE+ I  ++EHY CMVDL GR+  L EALE I SM
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P++++V++W + + ACR+HG+ ELGK AA+ ILE +P    A +L+SN+YA    WE V 
Sbjct: 508 PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVR 567

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           NIR+ M+E+N+ KE G S I+ + K H+F +G+  H ++ EIYA+LD++  K+K  GY+P
Sbjct: 568 NIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVP 627

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP------IRVFKNLRVCGDCHT 826
           D   VL ++EEE+K   +  HSEK+A+ FGL++  K +       IR+ KNLRVC DCH 
Sbjct: 628 DCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHL 687

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K +S V  REI++RD  RFH  K+G CSC DYW
Sbjct: 688 FFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 146/566 (25%), Positives = 248/566 (43%), Gaps = 99/566 (17%)

Query: 29  PPSSS--PPFIAQPT-TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLL 85
           PP S    PF+   + +SEP +  L Y     R++            G   D  ++  +L
Sbjct: 73  PPESIVFNPFLRDLSRSSEPRATILFYQ----RIRHV----------GGRLDQFSFLPIL 118

Query: 86  KSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDI 145
           K+  +      G  +H +  +     +  +    + +Y+ CG +N A  +F  M + RD+
Sbjct: 119 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-RDV 177

Query: 146 VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           V+W++MI  Y   G   +A  +F EM +    P+E     ++ AC  T N+     IY F
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237

Query: 206 LLKCGYFDSDVCVGCALIDMFV-KGSVD-----------------------------LES 235
           L++      D  +  AL+ M+   G +D                             L+ 
Sbjct: 238 LIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +FD+  +K+ V WT MI+   +   P++A+R+F +M  SG  PD  ++  V+SAC+ 
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L +    K +HS     GL  ++ +  +L++MYAKC   G +D +R VF++M   NV+SW
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKC---GGLDATRDVFEKMPRRNVVSW 413

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           +++I   +   G   +A+ LF+ M Q  V PN  TF  VL  C                 
Sbjct: 414 SSMINA-LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC----------------- 455

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-----NLVSYNTMVDAYAKNLNS 470
                             + SG +E+ +K F S+ ++      L  Y  MVD + +    
Sbjct: 456 ------------------SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLL 497

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
            +A E+   IE   V ++   + SL+S     G +  G+    RI++   E +H     L
Sbjct: 498 REALEV---IESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE--LEPDHDGALVL 552

Query: 531 IS-MYSRCANVEAAFQVFKEMEDRNV 555
           +S +Y+R    E    + + ME++NV
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNV 578


>gi|347954530|gb|AEP33765.1| organelle transcript processing 82, partial [Lepidium sativum]
          Length = 672

 Score =  456 bits (1174), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/661 (36%), Positives = 385/661 (58%), Gaps = 35/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  +F+ + E N + W  M            A++L++ MI  G LP+ ++   ++ +
Sbjct: 15  LSYAISIFETIQEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLKS 74

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ +    G+Q+H   ++ G  LD+ V  SL+ MYA+   +G ++D+ KVFDR    +V
Sbjct: 75  CAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQ---NGRLEDAHKVFDRSSHRHV 131

Query: 353 MSWTAIITGYVQSGGRD------------------------------KEAVKLFSDMIQG 382
           +S+TA+ITGY   G  +                              KEA++L+ DM++ 
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V P+  T  +V+ AC       +  Q+++     G   +  + N LI +Y++ G +E A
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGEVETA 251

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              F+ L +K+++S+NT++  +      ++A  L  E+  +G   +  T  S+L   + +
Sbjct: 252 CGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLPACAHL 311

Query: 503 GAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           GAI  G  IH  I K   G  +   +  +LI MY++C ++EAA QVF  M  R++ SW +
Sbjct: 312 GAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLSSWNA 371

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI GFA HG A  A ++F KM  +GI P+ IT++ +LSACSH+G++  G   FRSM  ++
Sbjct: 372 MIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDY 431

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I  ++EHY CM+DLLG  G   EA E IR+MP+  D ++W + L AC++H + ELG+  
Sbjct: 432 KITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKACKMHNNVELGESY 491

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +++ +P++P +++LLSN+YA+AG W+ VA IR  + ++ + K  GCS IE D+ VH+
Sbjct: 492 AQNLIKIEPENPGSYVLLSNIYATAGRWDQVAKIRTLLNDKGIKKAPGCSSIEIDSVVHE 551

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F +G+  HP+  EIY  L+++ + ++E G++PDT+ VL E+EEE K   L  HSEK+A+A
Sbjct: 552 FIIGDKFHPRNREIYRMLEEMEMLMEETGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 611

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLIST     + + KNLRVC +CH A K IS +  REI+ RD  R H +KDG  SC+DY
Sbjct: 612 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRLHLLKDGVWSCHDY 671

Query: 861 W 861
           W
Sbjct: 672 W 672



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 236/477 (49%), Gaps = 46/477 (9%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+ A  IF+++  + +++ W++M   +      V A+ ++V M+ LG  PN Y F  +++
Sbjct: 15  LSYAISIFETI-QEPNLLIWNTMFRGHALNSDSVTALKLYVCMISLGLLPNSYSFPFLLK 73

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK------ 242
           +C+ ++ +  G  I+G +LK GY D D+ V  +LI M+ +    LE A+KVFD+      
Sbjct: 74  SCAKSKALIEGQQIHGHVLKLGY-DLDMYVNTSLISMYAQNG-RLEDAHKVFDRSSHRHV 131

Query: 243 -------------------------MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
                                    ++ K+ V W  MI+   +    ++A+ L+ DM+ +
Sbjct: 132 VSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVETCNFKEALELYKDMMKT 191

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
              PD  T+  VVSAC++      G+QLHSW    G   ++ +   L+D+Y+KC   G V
Sbjct: 192 NVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKC---GEV 248

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           + +  +F  +   +V+SW  +I G+       KEA+ LF +M++   +PN  T  SVL A
Sbjct: 249 ETACGLFQGLAKKDVISWNTLIGGHTHM-NLYKEALLLFQEMLRSGESPNDVTMLSVLPA 307

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESLFEKNLV 455
           C +L   ++   ++ +  KR + + +      SLI MYA+ G +E A++ F+S+  ++L 
Sbjct: 308 CAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKCGDIEAAKQVFDSMLTRSLS 367

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           S+N M+  +A +  +  AF+L  ++   G+     TF  LLS  S  G +  G  I  R 
Sbjct: 368 SWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIF-RS 426

Query: 516 IKSGFESNHCI--YNALISMYSRCANVEAAFQVFKE--MEDRNVISWTSMITGFAKH 568
           +   ++    +  Y  +I +   C   + A ++ +   ME   VI W S++     H
Sbjct: 427 MSQDYKITPKLEHYGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVI-WCSLLKACKMH 482



 Score =  156 bits (395), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/362 (27%), Positives = 185/362 (51%), Gaps = 38/362 (10%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  ++  LLKSC +S+    G+ +H  + +   + +  +  SLIS+Y++ G 
Sbjct: 56  MISLGLLPNSYSFPFLLKSCAKSKALIEGQQIHGHVLKLGYDLDMYVNTSLISMYAQNGR 115

Query: 129 LNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVNR 158
           L +A+K+F    ++                              +D+VSW++MIS YV  
Sbjct: 116 LEDAHKVFDRSSHRHVVSYTALITGYASRGYINNARKLFDEISVKDVVSWNAMISGYVET 175

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
               +A+ ++ +M++    P+E     V+ AC+ + ++ +G  ++ ++   G F S++ +
Sbjct: 176 CNFKEALELYKDMMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHG-FGSNIKI 234

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
              LID++ K   ++E+A  +F  + +K+ + W  +I   T +   ++A+ LF +M+ SG
Sbjct: 235 VNVLIDLYSKCG-EVETACGLFQGLAKKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSG 293

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDVCVGCSLVDMYAKCTVDGS 336
             P+  T+  V+ AC+ L     G+ +H +  +   G+     +  SL+DMYAKC   G 
Sbjct: 294 ESPNDVTMLSVLPACAHLGAIDIGRWIHVYINKRLKGVTNASSLLTSLIDMYAKC---GD 350

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           ++ +++VFD ML  ++ SW A+I G+    G+   A  LFS M +  + P+  TF  +L 
Sbjct: 351 IEAAKQVFDSMLTRSLSSWNAMIFGFAMH-GKANAAFDLFSKMRKNGIDPDDITFVGLLS 409

Query: 397 AC 398
           AC
Sbjct: 410 AC 411



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 125/239 (52%), Gaps = 5/239 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M +    PD  T   ++ +C +S +  LG+ +HS +       N  I+N LI LYSKCG+
Sbjct: 188 MMKTNVKPDESTMVTVVSACAQSGSIELGRQLHSWIEDHGFGSNIKIVNVLIDLYSKCGE 247

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +  A  +F+ +  K+D++SW+++I  + +     +A+ +F EML  G  PN+    +V+ 
Sbjct: 248 VETACGLFQGLA-KKDVISWNTLIGGHTHMNLYKEALLLFQEMLRSGESPNDVTMLSVLP 306

Query: 189 ACSNTENVAIGHIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           AC++   + IG  I+ ++ K   G  ++   +  +LIDM+ K   D+E+A +VFD M  +
Sbjct: 307 ACAHLGAIDIGRWIHVYINKRLKGVTNASSLL-TSLIDMYAKCG-DIEAAKQVFDSMLTR 364

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +   W  MI      G    A  LF  M  +G  PD  T  G++SACS   +   G+ +
Sbjct: 365 SLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHI 423



 Score = 40.0 bits (92), Expect = 5.4,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 1/99 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK-LVHSLLTRSKLEPNSVI 115
           G+   A      M + G  PD  T+  LL +C  S    LG+ +  S+    K+ P    
Sbjct: 380 GKANAAFDLFSKMRKNGIDPDDITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEH 439

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
              +I L   CG   EA ++ ++M  + D V W S++ +
Sbjct: 440 YGCMIDLLGHCGLFKEAKEMIRTMPMEPDGVIWCSLLKA 478


>gi|115465559|ref|NP_001056379.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|52353535|gb|AAU44101.1| unknown protein [Oryza sativa Japonica Group]
 gi|113579930|dbj|BAF18293.1| Os05g0572900 [Oryza sativa Japonica Group]
 gi|215737011|dbj|BAG95940.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 687

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 250/667 (37%), Positives = 393/667 (58%), Gaps = 12/667 (1%)

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           +++G  ++  +++   FD  V     LI ++VK G + L  A +VFD M  +N V   L+
Sbjct: 32  LSLGKAVHARVVRAARFD--VVQYNNLIALYVKCGRLGL--ARQVFDAMPSRNPVSGNLL 87

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           ++     G  RDA+ L   + ++ F  + + LS  V+A + +  +  G+Q H +AI+ GL
Sbjct: 88  MSGYASSGRHRDALAL---LRVADFGLNEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGL 144

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           A    V  +++ MY +C     +D++ KVFD +   NV ++ ++I G++  G  D  +  
Sbjct: 145 AEHPYVCSAVLHMYCQCA---HMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDG-STS 200

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           +   M++     +H ++ +VL  C +  +  +  QV+T A+KR   L+  VG++L+ MY 
Sbjct: 201 IVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYG 260

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           +     +A + FE L EKN+VS+  ++ AY +N   E A +L  ++E  GV  + +T+A 
Sbjct: 261 KCDFPHEANRVFEVLPEKNIVSWTAIMTAYTQNELFEDALQLFLDMEMEGVRPNEFTYAV 320

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
            L+  + +  +  G  + A  +K+G      + NAL++MYS+  +VE A +VF  M  R+
Sbjct: 321 ALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARRVFLSMPCRD 380

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V+SW S+I G+A HG A  A+E F+ ML     P+ +T+I VLSAC+  GL+ EG+ +  
Sbjct: 381 VVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGLVDEGFYYLN 440

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
            M  E G+    EHY CMV LL R G L EA  FI S  +  DV+ WR+ L +C+V+ + 
Sbjct: 441 IMMKEVGVKPGKEHYTCMVGLLCRVGRLDEAERFIESNCIGTDVVAWRSLLSSCQVYRNY 500

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
            LG   AE I +  P+D   ++LLSN+YA A  W+ V  +R+ M+E  + KE G SWI+ 
Sbjct: 501 GLGHRVAEQIFQLKPKDVGTYVLLSNMYAKANRWDGVVKVRRLMRELGVRKEPGVSWIQV 560

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
            ++VH F   +  HP   +I  +L +L  KIK  GY+P+    LH++E+EQK ++L  HS
Sbjct: 561 GSEVHVFTSEDKKHPYMEQITKKLQELIDKIKVIGYVPNIAVALHDVEDEQKEEHLMYHS 620

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           EK+A+AFGLI T K + IR+ KN+R+C DCH AIK IS+ TGR IV+RD+ RFH I+DG 
Sbjct: 621 EKLALAFGLIRTPKGEAIRIMKNVRICDDCHVAIKLISLATGRRIVVRDTVRFHCIEDGV 680

Query: 855 CSCNDYW 861
           CSC+DYW
Sbjct: 681 CSCDDYW 687



 Score =  188 bits (477), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 143/520 (27%), Positives = 262/520 (50%), Gaps = 45/520 (8%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           LGK VH+ + R+    + V  N+LI+LY KCG L  A ++F +M + R+ VS + ++S Y
Sbjct: 34  LGKAVHARVVRAA-RFDVVQYNNLIALYVKCGRLGLARQVFDAMPS-RNPVSGNLLMSGY 91

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
            + G+  DA+ +   + + G   NEY  S+ + A ++  +  +G   +G+ +K G  +  
Sbjct: 92  ASSGRHRDALALL-RVADFGL--NEYVLSSAVAATAHVRSYDMGRQCHGYAIKAGLAEHP 148

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
             V  A++ M+ +    ++ A KVFD ++  N   +  MI      G    +  +   M+
Sbjct: 149 Y-VCSAVLHMYCQ-CAHMDEAVKVFDNVSSFNVFAFNSMINGFLDRGQMDGSTSIVRSMV 206

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
            +    D  +   V+  C+  +    G Q+H+ A++  L L+V VG +LVDMY KC    
Sbjct: 207 RNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNVYVGSALVDMYGKCDFP- 265

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
              ++ +VF+ + + N++SWTAI+T Y Q+    ++A++LF DM    V PN FT+A  L
Sbjct: 266 --HEANRVFEVLPEKNIVSWTAIMTAYTQN-ELFEDALQLFLDMEMEGVRPNEFTYAVAL 322

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDC-----------VGNSLISMYARSGRMEDARK 444
            +C  L             +K G AL  C           V N+L++MY++SG +EDAR+
Sbjct: 323 NSCAGLA-----------TLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGSVEDARR 371

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F S+  +++VS+N+++  YA +  + +A E  H++       S  TF  +LS  + +G 
Sbjct: 372 VFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSACAQLGL 431

Query: 505 IGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME--DRNVISWTSM 561
           + +G   ++  + + G +     Y  ++ +  R   ++ A + F E      +V++W S+
Sbjct: 432 VDEGFYYLNIMMKEVGVKPGKEHYTCMVGLLCRVGRLDEA-ERFIESNCIGTDVVAWRSL 490

Query: 562 ITG---FAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           ++    +  +G   R  E  +++     KP  +    +LS
Sbjct: 491 LSSCQVYRNYGLGHRVAEQIFQL-----KPKDVGTYVLLS 525



 Score =  115 bits (287), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 70/249 (28%), Positives = 133/249 (53%), Gaps = 3/249 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L+ G++  +   +  M +     D  +Y  +L  C  ++   LG  VH+   + +LE N 
Sbjct: 190 LDRGQMDGSTSIVRSMVRNVGQWDHVSYVAVLGHCASTKEVVLGSQVHTQALKRRLELNV 249

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++L+ +Y KC   +EAN++F+ +  K +IVSW++++++Y       DA+ +F++M  
Sbjct: 250 YVGSALVDMYGKCDFPHEANRVFEVLPEK-NIVSWTAIMTAYTQNELFEDALQLFLDMEM 308

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PNE+ ++  + +C+    +  G+ +    +K G++   + V  AL++M+ K S  +
Sbjct: 309 EGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGL-LPVCNALMNMYSK-SGSV 366

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A +VF  M  ++ V W  +I      G  R+A+  F DM+ +  +P   T  GV+SAC
Sbjct: 367 EDARRVFLSMPCRDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLSAC 426

Query: 294 SELELFTSG 302
           ++L L   G
Sbjct: 427 AQLGLVDEG 435



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 40/140 (28%), Positives = 70/140 (50%), Gaps = 1/140 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P+  TY++ L SC        G  + +   ++       + N+L+++YSK G 
Sbjct: 306 MEMEGVRPNEFTYAVALNSCAGLATLKNGNALGACTMKTGHWGLLPVCNALMNMYSKSGS 365

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A ++F SM   RD+VSW+S+I  Y + G+  +A+  F +ML     P+   F  V+ 
Sbjct: 366 VEDARRVFLSMPC-RDVVSWNSIIIGYAHHGRAREAMEAFHDMLFAEEVPSYVTFIGVLS 424

Query: 189 ACSNTENVAIGHIIYGFLLK 208
           AC+    V  G      ++K
Sbjct: 425 ACAQLGLVDEGFYYLNIMMK 444


>gi|224124638|ref|XP_002330073.1| predicted protein [Populus trichocarpa]
 gi|222871498|gb|EEF08629.1| predicted protein [Populus trichocarpa]
          Length = 793

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 267/765 (34%), Positives = 404/765 (52%), Gaps = 77/765 (10%)

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           ++N++ +IF  + N    +  ++M+  Y+ R     AI ++  MLE     + Y +  + 
Sbjct: 75  NINQSYQIFSHIENPNGFIC-NTMMKGYMQRNSPCKAIWVYKFMLESNVAADNYTYPILF 133

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           ++CS       G  I   +LK G FDSDV +   LI+M+     +L  A KVFD  +  +
Sbjct: 134 QSCSIRLAEFDGKCIQDHVLKVG-FDSDVYIQNTLINMYAVCG-NLSDARKVFDGSSVLD 191

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  M+     +G   +A  ++          DR     V+++ S + LF  GK+   
Sbjct: 192 MVSWNSMLAGYVLVGNVEEAKDVY----------DRMPERNVIASNSMIVLF--GKK--- 236

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
                                      G+V+++ K+F+ M   +++SW+A+I+ Y Q+  
Sbjct: 237 ---------------------------GNVEEACKLFNEMKQKDLVSWSALISCYEQNEM 269

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR-------- 419
            + EA+ LF +M    +  +     SVL AC  LL     + V+   VK G         
Sbjct: 270 YE-EALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQN 328

Query: 420 -----------------------ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
                                   LD    NS+IS Y + G +E AR  F+S+ +K+ VS
Sbjct: 329 ALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVS 388

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           ++ M+  YA+     +   L  E++  G         S++S  + + A+ +G+ IHA I 
Sbjct: 389 WSAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIR 448

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K+G + N  +   LI+MY +   VE A +VFK +E++ V +W ++I G A +G   ++L+
Sbjct: 449 KNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDKSLK 508

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
            F +M   G+ PN IT++AVL AC H GL+ EG +HF SM  EH I   ++HY CMVDLL
Sbjct: 509 TFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLL 568

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GR+G L EA E I SMP++ DV  W   LGAC+ +GD E G+     ++E  P     ++
Sbjct: 569 GRAGMLKEAEELIESMPMAPDVSTWGALLGACKKYGDNETGERIGRKLVELHPDHDGFNV 628

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YAS G+W  V  +R  M++  ++K  GCS IEA  +VH+F  G+ +HP+   I  
Sbjct: 629 LLSNIYASKGNWVDVLEVRGMMRQHGVVKTPGCSMIEAHGRVHEFLAGDKTHPQNEHIEH 688

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            LD++A K+K  GY PDT  V  +++EE+K   LF+HSEK+A+AFGLI+     PIR+ K
Sbjct: 689 MLDEMAKKLKLEGYAPDTREVSLDIDEEEKETTLFRHSEKLAIAFGLIAIDPPTPIRIVK 748

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLR+C DCHTA K IS    REIV+RD +RFHH K G CSC DYW
Sbjct: 749 NLRICNDCHTAAKLISKAFNREIVVRDRHRFHHFKQGSCSCMDYW 793



 Score =  179 bits (454), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 147/597 (24%), Positives = 275/597 (46%), Gaps = 81/597 (13%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSC-IRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           KAI+    M +     D  TY +L +SC IR   F  GK +   + +   + +  I N+L
Sbjct: 109 KAIWVYKFMLESNVAADNYTYPILFQSCSIRLAEFD-GKCIQDHVLKVGFDSDVYIQNTL 167

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I++Y+ CG+L++A K+F    +  D+VSW+SM++ YV  G   +A  ++  M E      
Sbjct: 168 INMYAVCGNLSDARKVFDG-SSVLDMVSWNSMLAGYVLVGNVEEAKDVYDRMPE------ 220

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
                                              +V    ++I +F K   ++E A K+
Sbjct: 221 ----------------------------------RNVIASNSMIVLFGKKG-NVEEACKL 245

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F++M +K+ V W+ +I+   Q     +A+ LF +M  +G + D   +  V+SACS L + 
Sbjct: 246 FNEMKQKDLVSWSALISCYEQNEMYEEALILFKEMNANGIMVDEVVVLSVLSACSRLLVV 305

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT--------------VD----------- 334
            +GK +H   ++ G+   V +  +L+ MY+ C               +D           
Sbjct: 306 ITGKLVHGLVVKVGIETYVNLQNALIHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGY 365

Query: 335 ---GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G ++ +R +FD M D + +SW+A+I+GY Q   R  E + LF +M      P+    
Sbjct: 366 VKCGEIEKARALFDSMPDKDNVSWSAMISGYAQQ-DRFTETLVLFQEMQIEGTKPDETIL 424

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            SV+ AC +L   +  + ++ +  K G  ++  +G +LI+MY + G +EDA + F+ L E
Sbjct: 425 VSVISACTHLAALDQGKWIHAYIRKNGLKINIILGTTLINMYMKLGCVEDALEVFKGLEE 484

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           K + ++N ++   A N   +K+ +   E+++ GV  +  TF ++L     +G + +G + 
Sbjct: 485 KGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRH 544

Query: 512 HARII---KSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAK 567
              +I   K G    H  Y  ++ +  R   ++ A ++ + M    +V +W +++    K
Sbjct: 545 FNSMIQEHKIGPNIKH--YGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGACKK 602

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +G       I  K++   + P+   +  +LS    +          R M  +HG+V+
Sbjct: 603 YGDNETGERIGRKLVE--LHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQHGVVK 657



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 137/502 (27%), Positives = 230/502 (45%), Gaps = 85/502 (16%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E N +  NS+I L+ K G++ EA K+F  M  ++D+VSWS++IS Y       +A+ +F 
Sbjct: 220 ERNVIASNSMIVLFGKKGNVEEACKLFNEM-KQKDLVSWSALISCYEQNEMYEEALILFK 278

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF--- 226
           EM   G   +E    +V+ ACS    V  G +++G ++K G  ++ V +  ALI M+   
Sbjct: 279 EMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVG-IETYVNLQNALIHMYSSC 337

Query: 227 ------------------------VKGSV---DLESAYKVFDKMTEKNTVGWTLMITRCT 259
                                   + G V   ++E A  +FD M +K+ V W+ MI+   
Sbjct: 338 EEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDKDNVSWSAMISGYA 397

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q     + + LF +M + G  PD   L  V+SAC+ L     GK +H++  + GL +++ 
Sbjct: 398 QQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINII 457

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +G +L++MY K    G V+D+ +VF  + +  V +W A+I G   +G  DK ++K FS+M
Sbjct: 458 LGTTLINMYMKL---GCVEDALEVFKGLEEKGVSTWNALILGLAMNGLVDK-SLKTFSEM 513

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +  V PN  TF +VL AC ++                                   G +
Sbjct: 514 KEHGVTPNEITFVAVLGACRHM-----------------------------------GLV 538

Query: 440 EDARKAFESLFEK-----NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           ++  + F S+ ++     N+  Y  MVD   +    ++A EL   IE   +     T+ +
Sbjct: 539 DEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEEL---IESMPMAPDVSTWGA 595

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS-MYSRCANVEAAFQVFKEMEDR 553
           LL      G    GE+I  ++++     +H  +N L+S +Y+   N     +V   M   
Sbjct: 596 LLGACKKYGDNETGERIGRKLVE--LHPDHDGFNVLLSNIYASKGNWVDVLEVRGMMRQH 653

Query: 554 NVISWT--SMITGFAK-HGFAA 572
            V+     SMI    + H F A
Sbjct: 654 GVVKTPGCSMIEAHGRVHEFLA 675



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 174/383 (45%), Gaps = 50/383 (13%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP-------- 111
           ++A+     M   G   D      +L +C R      GKLVH L+ +  +E         
Sbjct: 271 EEALILFKEMNANGIMVDEVVVLSVLSACSRLLVVITGKLVHGLVVKVGIETYVNLQNAL 330

Query: 112 -----------------------NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSW 148
                                  + +  NS+IS Y KCG++ +A  +F SM +K D VSW
Sbjct: 331 IHMYSSCEEVVTAQKLFSESCCLDQISWNSMISGYVKCGEIEKARALFDSMPDK-DNVSW 389

Query: 149 SSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           S+MIS Y  + +  + + +F EM   G  P+E    +VI AC++   +  G  I+ ++ K
Sbjct: 390 SAMISGYAQQDRFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRK 449

Query: 209 CGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
            G    ++ +G  LI+M++K G V  E A +VF  + EK    W  +I      G    +
Sbjct: 450 NG-LKINIILGTTLINMYMKLGCV--EDALEVFKGLEEKGVSTWNALILGLAMNGLVDKS 506

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG-KQLHSWAIRTGLALDVC-VGCSLV 325
           ++ F +M   G  P+  T   V+ AC  + L   G +  +S      +  ++   GC +V
Sbjct: 507 LKTFSEMKEHGVTPNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGC-MV 565

Query: 326 DMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           D+  +    G + ++ ++ + M +  +V +W A++ G  +  G ++   ++   ++  ++
Sbjct: 566 DLLGRA---GMLKEAEELIESMPMAPDVSTWGALL-GACKKYGDNETGERIGRKLV--EL 619

Query: 385 APNHFTF----ASVLKACGNLLD 403
            P+H  F    +++  + GN +D
Sbjct: 620 HPDHDGFNVLLSNIYASKGNWVD 642



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/206 (22%), Positives = 97/206 (47%), Gaps = 3/206 (1%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R  + +     M  +G  PD      ++ +C        GK +H+ + ++ L+ N ++  
Sbjct: 401 RFTETLVLFQEMQIEGTKPDETILVSVISACTHLAALDQGKWIHAYIRKNGLKINIILGT 460

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +LI++Y K G + +A ++FK +  ++ + +W+++I      G    ++  F EM E G  
Sbjct: 461 TLINMYMKLGCVEDALEVFKGL-EEKGVSTWNALILGLAMNGLVDKSLKTFSEMKEHGVT 519

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           PNE  F AV+ AC +   V  GH  +  +++      ++     ++D+  +  + L+ A 
Sbjct: 520 PNEITFVAVLGACRHMGLVDEGHRHFNSMIQEHKIGPNIKHYGCMVDLLGRAGM-LKEAE 578

Query: 238 KVFDKMTEKNTVG-WTLMITRCTQLG 262
           ++ + M     V  W  ++  C + G
Sbjct: 579 ELIESMPMAPDVSTWGALLGACKKYG 604



 Score = 39.7 bits (91), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 55/114 (48%), Gaps = 12/114 (10%)

Query: 48  NRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG------KLV 100
           N LI  L  +G V K++ T   M + G  P+  T+  +L +C      H+G      +  
Sbjct: 491 NALILGLAMNGLVDKSLKTFSEMKEHGVTPNEITFVAVLGAC-----RHMGLVDEGHRHF 545

Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           +S++   K+ PN      ++ L  + G L EA ++ +SM    D+ +W +++ +
Sbjct: 546 NSMIQEHKIGPNIKHYGCMVDLLGRAGMLKEAEELIESMPMAPDVSTWGALLGA 599


>gi|359492976|ref|XP_002283668.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Vitis vinifera]
          Length = 762

 Score =  456 bits (1173), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/693 (35%), Positives = 408/693 (58%), Gaps = 21/693 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           +  +++ C + + V+    I+  ++K G    D  +   L++++ K    +E+A KVFD+
Sbjct: 72  YVPILQECIDKKLVSDAQKIHAHIVKTGA-HKDAFLMTFLVNVYAKCGT-METARKVFDE 129

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           +  +N V WT ++T       P  A+++F +M+ +G  P  +TL   +SA S+L     G
Sbjct: 130 LPRRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLGTALSASSDLHSKELG 189

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+H ++I+  +  D  +G SL  +Y+KC   GS++ + K F R+ D NV+SWT +I+ +
Sbjct: 190 KQIHGYSIKYRIEFDASIGNSLCSLYSKC---GSLECAVKAFRRIRDKNVISWTTVISAW 246

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
               G     ++ F +M+   V PN FT  S L  C  +   ++  Q+++  +K G   +
Sbjct: 247 -GDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGTQIHSLTIKLGFESN 305

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK---------- 472
             + NS++ +Y + G + +A+K F+ +   +LV++N M+  +A+ ++  K          
Sbjct: 306 LPIKNSIMYLYLKCGWIHEAKKLFDEMETISLVTWNAMIAGHARMMDFAKDDLAAHQCGT 365

Query: 473 -AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            A  +  ++  +G+    +TF+S+LS  SS+ A+ +GEQ+HA+ IK+GF S+  +  AL+
Sbjct: 366 EALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQTIKTGFLSDVVVGTALV 425

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           +MY++C ++E A + F EM  R +ISWTSMITG+A++G   +AL +F  M   G++PN I
Sbjct: 426 NMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQALLLFEDMRLAGVRPNKI 485

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++ VLSACSHAG++ E   +F+ M +E+ I   M+HYAC++D+  R G L EA +FI+ 
Sbjct: 486 TFVGVLSACSHAGMVDEALDYFQMMKNEYKITPVMDHYACLIDMFVRLGRLDEAFDFIKE 545

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M L  +  +W   +  CR  G  ELG +AAE +L   P+D   + LL N+Y SAG W+ V
Sbjct: 546 MDLEPNEFIWSILIAGCRSQGKLELGFYAAEQLLNLKPKDTETYNLLLNMYLSAGKWKEV 605

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
           + +RK MKE  L +    SWI   +K++ F     SH ++ E+Y  L  L  K K FGY 
Sbjct: 606 SRVRKMMKEEKLGRLKDWSWISIKDKIYSFKRNARSHAQSGEMYELLGNLHEKAKSFGYE 665

Query: 772 PDTNFVL----HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            + +  +     + +EE+ +  +  HSEK+A+AFGL++TS + PIRV K++ +C DCH  
Sbjct: 666 WEESLEVTDEEEDADEEKALTSIVYHSEKLAIAFGLLNTSNAVPIRVTKSISMCRDCHNF 725

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           I+ IS+++ REI++RDS R H   +G CSC D+
Sbjct: 726 IRIISLLSAREIIIRDSKRLHKFINGHCSCGDF 758



 Score =  222 bits (566), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 293/579 (50%), Gaps = 29/579 (5%)

Query: 5   SLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIF 64
           SLP+ A    P S         +  PS   P ++   +++      +  +++ R      
Sbjct: 3   SLPSVAVTRTPKSESEFRKYSASFLPSEKSPSVSYQRSTQ------LDGVSEARCLDFRE 56

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            L  + ++G   +   Y  +L+ CI  +     + +H+ + ++    ++ ++  L+++Y+
Sbjct: 57  ALSFI-REGTKVESAFYVPILQECIDKKLVSDAQKIHAHIVKTGAHKDAFLMTFLVNVYA 115

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KCG +  A K+F  +  +R++VSW+++++ YV+  K   A+ +F EMLE G  P  Y   
Sbjct: 116 KCGTMETARKVFDELP-RRNVVSWTTLMTGYVHDSKPELAVQVFREMLEAGAYPTNYTLG 174

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKM 243
             + A S+  +  +G  I+G+ +K    + D  +G +L  ++ K GS  LE A K F ++
Sbjct: 175 TALSASSDLHSKELGKQIHGYSIKY-RIEFDASIGNSLCSLYSKCGS--LECAVKAFRRI 231

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            +KN + WT +I+     G     ++ F++M+     P+ FTL+  +S C  ++    G 
Sbjct: 232 RDKNVISWTTVISAWGDNGEAATGLQFFVEMLSECVEPNEFTLTSALSLCCVMQSLDIGT 291

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+HS  I+ G   ++ +  S++ +Y KC   G + +++K+FD M   ++++W A+I G+ 
Sbjct: 292 QIHSLTIKLGFESNLPIKNSIMYLYLKC---GWIHEAKKLFDEMETISLVTWNAMIAGHA 348

Query: 364 QSGGRDK----------EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           +     K          EA+ +F  + +  + P+ FTF+SVL  C +L+     EQV+  
Sbjct: 349 RMMDFAKDDLAAHQCGTEALSIFLKLNRSGMKPDLFTFSSVLSVCSSLVALEQGEQVHAQ 408

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K G   D  VG +L++MY + G +E A KAF  +  + L+S+ +M+  YA+N   ++A
Sbjct: 409 TIKTGFLSDVVVGTALVNMYNKCGSIERASKAFVEMSIRTLISWTSMITGYAQNGQPQQA 468

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALI 531
             L  ++   GV  +  TF  +LS  S  G + +    + +++K+ ++    +  Y  LI
Sbjct: 469 LLLFEDMRLAGVRPNKITFVGVLSACSHAGMVDEALD-YFQMMKNEYKITPVMDHYACLI 527

Query: 532 SMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
            M+ R   ++ AF   KEM+ + N   W+ +I G    G
Sbjct: 528 DMFVRLGRLDEAFDFIKEMDLEPNEFIWSILIAGCRSQG 566


>gi|357117655|ref|XP_003560579.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial-like [Brachypodium distachyon]
          Length = 614

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 220/572 (38%), Positives = 349/572 (61%), Gaps = 5/572 (0%)

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC E +    G+Q+H+  ++      V +   L+ +Y +C   G++DD+R V D M +
Sbjct: 48  ITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRC---GALDDARNVLDGMPE 104

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV+SWTA+I+GY QSG R  EA++LF  M++     N FT A+VL +C         EQ
Sbjct: 105 RNVVSWTAMISGYSQSG-RHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V++  VK        VG+SL+ MY +SG +++ARK F+ L E++ VS   ++  YA+   
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            ++A +L  ++  +G+  +  TF +LL+  S + ++  G+Q+H  I++        + N+
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNS 283

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MYS+C  +  + +VF  M  R+ ISW +M+ G+ +HG     +++F + + + +KP+
Sbjct: 284 LIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLF-RTMTEEVKPD 342

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T +AVLS CSH GL+ EG   F  +  E   V  + HY C++DLLGRSG L +AL+ I
Sbjct: 343 SVTLLAVLSGCSHGGLVDEGLDIFDLIVKEQNAVIHIGHYGCVIDLLGRSGQLQKALDLI 402

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
             MP      +W + LGACRVH +  +G+  A+ +L+ +P +   +++LSN+YA+AG W+
Sbjct: 403 EHMPFEPTPAIWGSLLGACRVHINVSVGEVVAQKLLDMEPGNAGNYVILSNIYAAAGMWK 462

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V  +RK M E  + KE   SWI  D  +H FH  E  HP+  +I A++ ++ + +K  G
Sbjct: 463 DVFRVRKLMLENTVTKEPAKSWIILDKVIHTFHSSERFHPRKKDINAKIKEVYVDVKAAG 522

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++PD + VLH++++EQK + L  HSEK+A+ FGL++T     I+V KNLR+C DCH   K
Sbjct: 523 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIQVMKNLRICVDCHNFAK 582

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++S V GREI LRD NRFH +KDG C+C DYW
Sbjct: 583 FVSKVYGREISLRDKNRFHLLKDGACTCGDYW 614



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 118/394 (29%), Positives = 214/394 (54%), Gaps = 16/394 (4%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y   + +C+  +    G+ VH+ + +++  P   +   LI LY +CG L++A  +   M 
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGM- 102

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            +R++VSW++MIS Y   G+  +A+ +F+ ML  G   NE+  + V+ +C   +++    
Sbjct: 103 PERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVE 162

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++  ++K   F+S + VG +L+DM+ K S +++ A KVFD + E++TV  T +I+   Q
Sbjct: 163 QVHSLVVKTN-FESHMFVGSSLLDMYGK-SGNIQEARKVFDMLPERDTVSCTAIISGYAQ 220

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
           LG   +A+ LF  +  SG   +  T + ++++ S L     GKQ+H   +R  L   + +
Sbjct: 221 LGLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVL 280

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             SL+DMY+KC   G +  SR+VFD M   + +SW A++ GY +  G  +E V+LF  M 
Sbjct: 281 QNSLIDMYSKC---GKLLYSRRVFDNMPQRSAISWNAMLMGYGRH-GIGQEVVQLFRTMT 336

Query: 381 QGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARS 436
           + +V P+  T  +VL  C  G L+D  +   ++   VK   A+   +G+   +I +  RS
Sbjct: 337 E-EVKPDSVTLLAVLSGCSHGGLVDEGL--DIFDLIVKEQNAVIH-IGHYGCVIDLLGRS 392

Query: 437 GRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN 469
           G+++ A    E + FE     + +++ A   ++N
Sbjct: 393 GQLQKALDLIEHMPFEPTPAIWGSLLGACRVHIN 426



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 218/434 (50%), Gaps = 20/434 (4%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           + A I AC   + +  G  ++  ++K  Y    V +   LI ++V+    L+ A  V D 
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARY-RPPVYLATRLIILYVRCGA-LDDARNVLDG 101

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M E+N V WT MI+  +Q G   +A+ LF+ M+ +G   + FTL+ V+++C   +     
Sbjct: 102 MPERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQV 161

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+HS  ++T     + VG SL+DMY K    G++ ++RKVFD + + + +S TAII+GY
Sbjct: 162 EQVHSLVVKTNFESHMFVGSSLLDMYGK---SGNIQEARKVFDMLPERDTVSCTAIISGY 218

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q  G D EA+ LF  +    +  N+ TF ++L +   L   N  +QV+   +++     
Sbjct: 219 AQL-GLDDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFF 277

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             + NSLI MY++ G++  +R+ F+++ +++ +S+N M+  Y ++   ++  +L   + +
Sbjct: 278 IVLQNSLIDMYSKCGKLLYSRRVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE 337

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI----YNALISMYSRCA 538
             V   + T  ++LSG S  G + +G  I   I+K   E N  I    Y  +I +  R  
Sbjct: 338 E-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDLIVK---EQNAVIHIGHYGCVIDLLGRSG 393

Query: 539 NVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            ++ A  + + M  +     W S++     H       E+  + L D    N   Y+ + 
Sbjct: 394 QLQKALDLIEHMPFEPTPAIWGSLLGACRVH-INVSVGEVVAQKLLDMEPGNAGNYVILS 452

Query: 598 SACSHAGLISEGWK 611
           +  + AG+    WK
Sbjct: 453 NIYAAAGM----WK 462



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 72/288 (25%), Positives = 145/288 (50%), Gaps = 14/288 (4%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           + + + AC          QV+ H VK        +   LI +Y R G ++DAR   + + 
Sbjct: 44  YDAAITACVERQALGEGRQVHAHMVKARYRPPVYLATRLIILYVRCGALDDARNVLDGMP 103

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E+N+VS+  M+  Y+++    +A EL   +   G   + +T A++L+      +I + EQ
Sbjct: 104 ERNVVSWTAMISGYSQSGRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQ 163

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H+ ++K+ FES+  + ++L+ MY +  N++ A +VF  + +R+ +S T++I+G+A+ G 
Sbjct: 164 VHSLVVKTNFESHMFVGSSLLDMYGKSGNIQEARKVFDMLPERDTVSCTAIISGYAQLGL 223

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME--- 627
              AL++F ++ + G++ N +T+  +L++ S    ++ G +        HG++ R E   
Sbjct: 224 DDEALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQ-------VHGLILRKELPF 276

Query: 628 ---HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
                  ++D+  + G L  +     +MP     + W   L     HG
Sbjct: 277 FIVLQNSLIDMYSKCGKLLYSRRVFDNMP-QRSAISWNAMLMGYGRHG 323



 Score = 96.7 bits (239), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 69/248 (27%), Positives = 125/248 (50%), Gaps = 8/248 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR  +A+     M + G   +  T + +L SC   ++    + VHSL+ ++  E +  + 
Sbjct: 121 GRHAEALELFIRMLRAGCKANEFTLATVLTSCPVHQSIQQVEQVHSLVVKTNFESHMFVG 180

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SL+ +Y K G++ EA K+F  M  +RD VS +++IS Y   G   +A+ +F ++   G 
Sbjct: 181 SSLLDMYGKSGNIQEARKVF-DMLPERDTVSCTAIISGYAQLGLDDEALDLFRQLYSSGM 239

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVDLE 234
             N   F+ ++ + S   ++  G  ++G +L+    +F   + +  +LIDM+ K    L 
Sbjct: 240 QCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFF---IVLQNSLIDMYSKCGKLLY 296

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           S  +VFD M +++ + W  M+    + G  ++ ++LF  M      PD  TL  V+S CS
Sbjct: 297 SR-RVFDNMPQRSAISWNAMLMGYGRHGIGQEVVQLFRTMT-EEVKPDSVTLLAVLSGCS 354

Query: 295 ELELFTSG 302
              L   G
Sbjct: 355 HGGLVDEG 362



 Score = 67.8 bits (164), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 74/147 (50%), Gaps = 5/147 (3%)

Query: 65  TLDLMTQ---KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
            LDL  Q    G   +  T++ LL S     + + GK VH L+ R +L    V+ NSLI 
Sbjct: 227 ALDLFRQLYSSGMQCNYVTFTTLLTSLSGLASLNYGKQVHGLILRKELPFFIVLQNSLID 286

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +YSKCG L  + ++F +M  +R  +SW++M+  Y   G   + + +F  M E    P+  
Sbjct: 287 MYSKCGKLLYSRRVFDNM-PQRSAISWNAMLMGYGRHGIGQEVVQLFRTMTE-EVKPDSV 344

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLK 208
              AV+  CS+   V  G  I+  ++K
Sbjct: 345 TLLAVLSGCSHGGLVDEGLDIFDLIVK 371


>gi|357118480|ref|XP_003560982.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g30700-like [Brachypodium distachyon]
          Length = 796

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/652 (37%), Positives = 378/652 (57%), Gaps = 11/652 (1%)

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F +D  V  AL  ++   S     A KVFD +   +TV W  ++   +      +A+  F
Sbjct: 154 FAADNFVASALAKLYFTLSRG-NDARKVFDAVPSPDTVLWNTLLAGLSG----SEALEAF 208

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           + M  +G + PD  TL+ V+ A +E+   T G+ +H++  + GLA    V   L+ +YAK
Sbjct: 209 VRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAK 268

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G ++ +R +FDRM   +++++ A+I+GY    G    +V+LF +++   + P+  T
Sbjct: 269 C---GDMECARHLFDRMEGPDLVTYNALISGY-SINGMVGSSVELFKELVGMGLRPSSST 324

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
             +++          +A  ++ H VK G   +  V  +L ++Y R   M+ AR+AF+++ 
Sbjct: 325 LVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFNDMDSARRAFDAMP 384

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           EK + S+N M+  YA+N  +E A  L  +++   V  +  T +S LS  + +GA+  G+ 
Sbjct: 385 EKTMESWNAMISGYAQNGLTEMAVALFQQMQALNVRPNPLTISSALSACAQLGALSLGKW 444

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H  I     E N  +  ALI MY +C ++  A  +F  M+++NV+SW  MI+G+  HG 
Sbjct: 445 VHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWNVMISGYGLHGQ 504

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
            A AL+++  M+   + P   T+++VL ACSH GL+ EG   FRSM  ++GI   +EH  
Sbjct: 505 GAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSDYGITPGIEHCT 564

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSA-DVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
           CMVDLLGR+G L EA E I   P SA    +W   LGAC VH D +L K A++ + E +P
Sbjct: 565 CMVDLLGRAGQLKEAFELISEFPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFELEP 624

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
           ++   ++LLSNLY S   +   A +R+  K R L+K  GC+ IE  ++ H F  G+ +HP
Sbjct: 625 ENTGYYVLLSNLYTSKKQYSEAAVVRQEAKSRKLVKTPGCTLIEIGDRPHVFMAGDRAHP 684

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS 809
           ++  IY  L++L  K+ E GY PDT   L+++EEE+K   +  HSEK+A+AFGL++T   
Sbjct: 685 QSDAIYLYLEKLTAKMIEAGYRPDTEAALYDVEEEEKEHMVKVHSEKLAIAFGLLNTEPG 744

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             IR+ KNLRVC DCH A K IS VT R IV+RD++RFHH +DG CSC DYW
Sbjct: 745 TEIRIIKNLRVCLDCHNATKIISKVTQRLIVVRDASRFHHFRDGVCSCGDYW 796



 Score =  181 bits (459), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 140/465 (30%), Positives = 228/465 (49%), Gaps = 33/465 (7%)

Query: 36  FIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNF 94
           F A P+    L N L+  L+     +A      M   G+  PD  T + +L +     N 
Sbjct: 181 FDAVPSPDTVLWNTLLAGLSGSEALEAFVR---MAGAGSVRPDSTTLASVLPAAAEVANT 237

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            +G+ VH+   +  L  +  ++  LISLY+KCGD+  A  +F  M    D+V+++++IS 
Sbjct: 238 TMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGP-DLVTYNALISG 296

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G    ++ +F E++ +G  P+     A+I   S   +  +   ++  ++K G  D+
Sbjct: 297 YSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAG-LDA 355

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           +  V  AL  ++ + + D++SA + FD M EK    W  MI+   Q G    A+ LF  M
Sbjct: 356 NAPVSTALTTLYCRFN-DMDSARRAFDAMPEKTMESWNAMISGYAQNGLTEMAVALFQQM 414

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
                 P+  T+S  +SAC++L   + GK +H       L L+V V  +L+DMY KC   
Sbjct: 415 QALNVRPNPLTISSALSACAQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKC--- 471

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           GS+ ++R +FD M + NV+SW  +I+GY    G+  EA+KL+ DM+   + P   TF SV
Sbjct: 472 GSIAEARCIFDSMDNKNVVSWNVMISGYGLH-GQGAEALKLYKDMMDAHLHPTSSTFLSV 530

Query: 395 LKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE--SL 449
           L AC   G + +     +  T        ++ C    ++ +  R+G++   ++AFE  S 
Sbjct: 531 LYACSHGGLVKEGTTVFRSMTSDYGITPGIEHC--TCMVDLLGRAGQL---KEAFELISE 585

Query: 450 FEKNLVSYNT--------MV--DAYAKNLNSEKAFELLHEIEDTG 484
           F K+ V            MV  D     L S+K FEL  E E+TG
Sbjct: 586 FPKSAVGPGIWGALLGACMVHKDGDLAKLASQKLFEL--EPENTG 628



 Score =  164 bits (414), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 216/462 (46%), Gaps = 21/462 (4%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+L   S    ++ + ++L  LY      N+A K+F ++ +  D V W+++++      
Sbjct: 145 LHALAVASGFAADNFVASALAKLYFTLSRGNDARKVFDAVPSP-DTVLWNTLLAGLSGS- 202

Query: 160 KQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
              +A+  FV M   G   P+    ++V+ A +   N  +G  ++ F  KCG    +  V
Sbjct: 203 ---EALEAFVRMAGAGSVRPDSTTLASVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVV 259

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
              LI ++ K   D+E A  +FD+M   + V +  +I+  +  G    ++ LF +++  G
Sbjct: 260 -TGLISLYAKCG-DMECARHLFDRMEGPDLVTYNALISGYSINGMVGSSVELFKELVGMG 317

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             P   TL  ++   S          LH+  ++ GL  +  V  +L  +Y +      +D
Sbjct: 318 LRPSSSTLVALIPVHSPFGHEPLAGCLHAHVVKAGLDANAPVSTALTTLYCRFN---DMD 374

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +R+ FD M +  + SW A+I+GY Q+ G  + AV LF  M    V PN  T +S L AC
Sbjct: 375 SARRAFDAMPEKTMESWNAMISGYAQN-GLTEMAVALFQQMQALNVRPNPLTISSALSAC 433

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
             L   ++ + V+         L+  V  +LI MY + G + +AR  F+S+  KN+VS+N
Sbjct: 434 AQLGALSLGKWVHKIIANEKLELNVYVMTALIDMYVKCGSIAEARCIFDSMDNKNVVSWN 493

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI--- 515
            M+  Y  +    +A +L  ++ D  +  ++ TF S+L   S  G + +G  +   +   
Sbjct: 494 VMISGYGLHGQGAEALKLYKDMMDAHLHPTSSTFLSVLYACSHGGLVKEGTTVFRSMTSD 553

Query: 516 --IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
             I  G E  HC    ++ +  R   ++ AF++  E     V
Sbjct: 554 YGITPGIE--HC--TCMVDLLGRAGQLKEAFELISEFPKSAV 591



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 125/247 (50%), Gaps = 26/247 (10%)

Query: 385 APNHFTFA----SVLKAC--GNLLDSNVA----EQVYTHAVKRGRALDDCVGNSLISMYA 434
           +P+ F+FA    S+  +C  G +   + A      ++  AV  G A D+ V ++L  +Y 
Sbjct: 110 SPDSFSFAFAATSLASSCSRGGISPPSAASAALRPLHALAVASGFAADNFVASALAKLYF 169

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFA 493
              R  DARK F+++   + V +NT++      L+  +A E    +   G V   + T A
Sbjct: 170 TLSRGNDARKVFDAVPSPDTVLWNTLL----AGLSGSEALEAFVRMAGAGSVRPDSTTLA 225

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+L  A+ +     G  +HA   K G   +  +   LIS+Y++C ++E A  +F  ME  
Sbjct: 226 SVLPAAAEVANTTMGRCVHAFGEKCGLAQHEHVVTGLISLYAKCGDMECARHLFDRMEGP 285

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV-----------LSACSH 602
           +++++ ++I+G++ +G    ++E+F +++  G++P+  T +A+           L+ C H
Sbjct: 286 DLVTYNALISGYSINGMVGSSVELFKELVGMGLRPSSSTLVALIPVHSPFGHEPLAGCLH 345

Query: 603 AGLISEG 609
           A ++  G
Sbjct: 346 AHVVKAG 352


>gi|334185836|ref|NP_001190038.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
 gi|218546754|sp|P0C899.1|PP271_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g49142
 gi|332644983|gb|AEE78504.1| tetratricopeptide repeat-like family protein [Arabidopsis thaliana]
          Length = 686

 Score =  456 bits (1172), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 244/635 (38%), Positives = 358/635 (56%), Gaps = 42/635 (6%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+ SA KVFD++ E+N +   +MI      G   + +++F  M      PD +T   V+ 
Sbjct: 89  DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS       G+++H  A + GL+  + VG  LV MY KC   G + ++R V D M   +
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKC---GFLSEARLVLDEMSRRD 205

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SW +++ GY Q+  R  +A+++  +M   +++ +  T AS+L A  N    NV     
Sbjct: 206 VVSWNSLVVGYAQNQ-RFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV----- 259

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
                               MY +          F  + +K+LVS+N M+  Y KN    
Sbjct: 260 --------------------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPV 291

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A EL   +E  G    A +  S+L       A+  G++IH  I +     N  + NALI
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C  +E A  VF+ M+ R+V+SWT+MI+ +   G    A+ +F K+   G+ P+ I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
            ++  L+ACSHAGL+ EG   F+ M D + I  R+EH ACMVDLLGR+G + EA  FI+ 
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M +  +  VW   LGACRVH DT++G  AA+ + +  P+    ++LLSN+YA AG WE V
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
            NIR  MK + L K  G S +E +  +H F VG+ SHP++ EIY ELD L  K+KE GY+
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK-----PIRVFKNLRVCGDCHT 826
           PD+   LH++EEE K  +L  HSEK+A+ F L++T + +      IR+ KNLR+CGDCH 
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A K IS +T REI++RD+NRFH  + G CSC DYW
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686



 Score =  153 bits (386), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 58/493 (11%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+G   + +     M      PD  T+  +LK+C  S    +G+ +H   T+  L   
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N L+S+Y KCG L+EA  +   M ++RD+VSW+S++  Y    +  DA+ +  EM 
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 173 ELGFCPNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            +    +    ++++ A SNT  ENV                            M+VK  
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENV----------------------------MYVK-- 263

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                   +F KM +K+ V W +MI    +   P +A+ L+  M   GF PD  +++ V+
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC +    + GK++H +  R  L  ++ +  +L+DMYAKC   G ++ +R VF+ M   
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC---GCLEKARDVFENMKSR 373

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVA 407
           +V+SWTA+I+ Y  S GR  +AV LFS +    + P+   F + L AC   G L +    
Sbjct: 374 DVVSWTAMISAYGFS-GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
            ++ T   K    L+      ++ +  R+G++++A +  + +  E N   +  ++ A   
Sbjct: 433 FKLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490

Query: 467 N-------LNSEKAFELLHEIEDTGVGTS-AYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           +       L ++K F+L  E     V  S  Y  A      ++I  I K + +      S
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550

Query: 519 GFESNHCIYNALI 531
             E N  I+  L+
Sbjct: 551 NVEVNRIIHTFLV 563



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 25/313 (7%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G  L+  YA    +  ARK F+ + E+N++  N M+ +Y  N    +  ++   +    
Sbjct: 76  LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V    YTF  +L   S  G I  G +IH    K G  S   + N L+SMY +C  +  A 
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            V  EM  R+V+SW S++ G+A++     ALE+  +M +  I  +  T  ++L A S+  
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT- 254

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP---LSADVLVW 661
             +E   + + M+ + G  + +  +  M+ +  ++    EA+E    M       D +  
Sbjct: 255 -TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312

Query: 662 RTFLGAC----------RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
            + L AC          ++HG  E  K    ++LE           L ++YA  G  E  
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN---------ALIDMYAKCGCLEKA 363

Query: 712 ANIRKRMKERNLI 724
            ++ + MK R+++
Sbjct: 364 RDVFENMKSRDVV 376


>gi|145333528|ref|NP_001078414.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635630|sp|A8MQA3.2|PP330_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g21065
 gi|332658994|gb|AEE84394.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 595

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/567 (40%), Positives = 350/567 (61%), Gaps = 5/567 (0%)

Query: 299 FTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWT 356
            T  +Q+H+++IR G+++ D  +G  L+           +  + KVF ++    NV  W 
Sbjct: 30  ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89

Query: 357 AIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            +I GY + G     A  L+ +M + G V P+  T+  ++KA   + D  + E +++  +
Sbjct: 90  TLIRGYAEIGN-SISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + G      V NSL+ +YA  G +  A K F+ + EK+LV++N++++ +A+N   E+A  
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  E+   G+    +T  SLLS  + IGA+  G+++H  +IK G   N    N L+ +Y+
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF-YKMLADGIKPNGITYI 594
           RC  VE A  +F EM D+N +SWTS+I G A +GF   A+E+F Y    +G+ P  IT++
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            +L ACSH G++ EG+++FR M +E+ I  R+EH+ CMVDLL R+G + +A E+I+SMP+
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             +V++WRT LGAC VHGD++L + A   IL+ +P     ++LLSN+YAS   W  V  I
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           RK+M    + K  G S +E  N+VH+F +G+ SHP++  IYA+L ++  +++  GY+P  
Sbjct: 449 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 508

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           + V  ++EEE+K   +  HSEKIA+AF LIST +  PI V KNLRVC DCH AIK +S V
Sbjct: 509 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 568

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             REIV+RD +RFHH K+G CSC DYW
Sbjct: 569 YNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 210/392 (53%), Gaps = 18/392 (4%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L TY +   S  + R  H   + H + + S  E    ++  L+SL S    ++ A+K+F 
Sbjct: 22  LQTYGV--SSITKLRQIHAFSIRHGV-SISDAELGKHLIFYLVSLPSP-PPMSYAHKVFS 77

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENV 196
            +    ++  W+++I  Y   G  + A  ++ EM   G   P+ + +  +I+A +   +V
Sbjct: 78  KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
            +G  I+  +++ G F S + V  +L+ ++     D+ SAYKVFDKM EK+ V W  +I 
Sbjct: 138 RLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCG-DVASAYKVFDKMPEKDLVAWNSVIN 195

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              + G P +A+ L+ +M   G  PD FT+  ++SAC+++   T GK++H + I+ GL  
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           ++     L+D+YA+C   G V++++ +FD M+D N +SWT++I G +   G  KEA++LF
Sbjct: 256 NLHSSNVLLDLYARC---GRVEEAKTLFDEMVDKNSVSWTSLIVG-LAVNGFGKEAIELF 311

Query: 377 SDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQV-YTHAVKRGRALDDCVGN--SLISM 432
             M   + + P   TF  +L AC +     V E   Y   ++    ++  + +   ++ +
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHC--GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369

Query: 433 YARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            AR+G+++ A +  +S+  + N+V + T++ A
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 16/318 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  L+K+     +  LG+ +HS++ RS       + NSL+ LY+ CGD+  A K+
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K D+V+W+S+I+ +   GK  +A+ ++ EM   G  P+ +   +++ AC+    
Sbjct: 179 FDKMPEK-DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +G  ++ +++K G    ++     L+D++ +    +E A  +FD+M +KN+V WT +I
Sbjct: 238 LTLGKRVHVYMIKVG-LTRNLHSSNVLLDLYARCG-RVEEAKTLFDEMVDKNSVSWTSLI 295

Query: 256 TRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
                 G  ++AI LF  M    G LP   T  G++ ACS   +   G + +   +R   
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEY 354

Query: 315 ALDVCV---GCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDK 370
            ++  +   GC +VD+ A+    G V  + +    M +  NV+ W  ++      G  D 
Sbjct: 355 KIEPRIEHFGC-MVDLLARA---GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD- 409

Query: 371 EAVKLFSDMIQGQVAPNH 388
             +  F+ +   Q+ PNH
Sbjct: 410 --LAEFARIQILQLEPNH 425



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 6/210 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+ ++A+     M  KG  PD  T   LL +C +     LGK VH  + +  L  N   
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL- 174
            N L+ LY++CG + EA  +F  M +K   VSW+S+I      G   +AI +F  M    
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNS-VSWTSLIVGLAVNGFGKEAIELFKYMESTE 318

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV-CVGCALIDMFVKGSVDL 233
           G  P E  F  ++ ACS+   V  G   +  + +    +  +   GC ++D+  +    +
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC-MVDLLARAG-QV 376

Query: 234 ESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
           + AY+    M  + N V W  ++  CT  G
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406


>gi|15239085|ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65570
 gi|8978285|dbj|BAA98176.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010689|gb|AED98072.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 252/681 (37%), Positives = 397/681 (58%), Gaps = 12/681 (1%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           FS ++R C +  +++    I   +LK G F +++  G  L+D  +K   D++ A +VFD 
Sbjct: 68  FSQLLRQCIDERSISGIKTIQAHMLKSG-FPAEIS-GSKLVDASLKCG-DIDYARQVFDG 124

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M+E++ V W  +I    +    ++A+ ++  MI +  LPD +TLS V  A S+L L    
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184

Query: 303 KQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           ++ H  A+  GL + +V VG +LVDMY K    G   +++ V DR+ + +V+  TA+I G
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKF---GKTREAKLVLDRVEEKDVVLITALIVG 241

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y Q G  D EAVK F  M+  +V PN +T+ASVL +CGNL D    + ++   VK G   
Sbjct: 242 YSQKG-EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
                 SL++MY R   ++D+ + F+ +   N VS+ +++    +N   E A     ++ 
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              +  +++T +S L G S++    +G QIH  + K GF+ +    + LI +Y +C   +
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A  VF  + + +VIS  +MI  +A++GF   AL++F +M+  G++PN +T ++VL AC+
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           ++ L+ EG + F S + +  I+   +HYACMVDLLGR+G L EA E + +  ++ D+++W
Sbjct: 481 NSRLVEEGCELFDS-FRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLW 538

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           RT L AC+VH   E+ +     ILE +P D    IL+SNLYAS G W  V  ++ +MK+ 
Sbjct: 539 RTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598

Query: 722 NLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
            L K    SW+E + + H F  G+  SHP + +I   L++L  K K+ GY+ D + V  +
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQD 658

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +EE  K + L QHSEK+A+AF  +  +    IR+ KNLRVC DCH+ IK +S V  REI+
Sbjct: 659 MEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREII 717

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
            RDS RFHH +DG CSC DYW
Sbjct: 718 CRDSKRFHHFRDGSCSCGDYW 738



 Score =  216 bits (549), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 147/525 (28%), Positives = 268/525 (51%), Gaps = 15/525 (2%)

Query: 64  FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLY 123
            T D +T   N      +S LL+ CI  R+    K + + + +S   P  +  + L+   
Sbjct: 57  ITCDTLTTTHN------FSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDAS 109

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            KCGD++ A ++F  M ++R IV+W+S+I+  +   +  +A+ M+  M+     P+EY  
Sbjct: 110 LKCGDIDYARQVFDGM-SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           S+V +A S+          +G  +  G   S+V VG AL+DM+VK     E A  V D++
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE-AKLVLDRV 227

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            EK+ V  T +I   +Q G   +A++ F  M++    P+ +T + V+ +C  L+   +GK
Sbjct: 228 EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGK 287

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            +H   +++G    +    SL+ MY +C++   VDDS +VF  +   N +SWT++I+G V
Sbjct: 288 LIHGLMVKSGFESALASQTSLLTMYLRCSL---VDDSLRVFKCIEYPNQVSWTSLISGLV 344

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           Q+ GR++ A+  F  M++  + PN FT +S L+ C NL       Q++    K G   D 
Sbjct: 345 QN-GREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDK 403

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
             G+ LI +Y + G  + AR  F++L E +++S NTM+ +YA+N    +A +L   + + 
Sbjct: 404 YAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINL 463

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G+  +  T  S+L   ++   + +G ++     K      +  Y  ++ +  R   +E A
Sbjct: 464 GLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA 523

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
             +  E+ + +++ W ++++    H     A  I  K+L   I+P
Sbjct: 524 EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE--IEP 566



 Score =  170 bits (431), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 219/446 (49%), Gaps = 14/446 (3%)

Query: 48  NRLI-YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N LI Y +   R ++A+    LM      PD  T S + K+          +  H L   
Sbjct: 134 NSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVI 193

Query: 107 SKLEPNSVILNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
             LE ++V + S L+ +Y K G   EA  +   +  ++D+V  +++I  Y  +G+  +A+
Sbjct: 194 LGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV-EEKDVVLITALIVGYSQKGEDTEAV 252

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
             F  ML     PNEY +++V+ +C N +++  G +I+G ++K G F+S +    +L+ M
Sbjct: 253 KAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG-FESALASQTSLLTM 311

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           +++ S+ ++ + +VF  +   N V WT +I+   Q G    A+  F  M+     P+ FT
Sbjct: 312 YLRCSL-VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           LS  +  CS L +F  G+Q+H    + G   D   G  L+D+Y KC   G  D +R VFD
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC---GCSDMARLVFD 427

Query: 346 RMLDHNVMSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
            + + +V+S   +I  Y Q+G GR  EA+ LF  MI   + PN  T  SVL AC N    
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGR--EALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA- 463
               +++    K    L +     ++ +  R+GR+E+A      +   +LV + T++ A 
Sbjct: 486 EEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545

Query: 464 --YAKNLNSEKAFELLHEIEDTGVGT 487
             + K   +E+    + EIE    GT
Sbjct: 546 KVHRKVEMAERITRKILEIEPGDEGT 571


>gi|449500331|ref|XP_004161068.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g33680-like [Cucumis sativus]
          Length = 710

 Score =  455 bits (1171), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 261/704 (37%), Positives = 407/704 (57%), Gaps = 11/704 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P   ++  LL  C R ++   GK +H+ L R+    +  + NSL++LY+KCG + +A  +
Sbjct: 8   PQHRSFVDLLLRCTRQKDLQKGKAIHAQLLRTGSFSSVYLTNSLVNLYAKCGSIVKAKLV 67

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGK--QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           F+S+ NK D+VSW+ +I+ Y  +G       + +F  M      PN + FS V  A S++
Sbjct: 68  FESITNK-DVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSS 126

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
                G   +   +K   F  DV VG +LI+M+ K    L+ A KVFD + E+NTV W  
Sbjct: 127 PETFGGLQAHALAIKTSNF-YDVFVGSSLINMYCKIGCMLD-ARKVFDTIPERNTVSWAT 184

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           +I+         +A  LF  M       D+F  + V+SA +  +L   GKQ+H  A++ G
Sbjct: 185 IISGYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNG 244

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
           L     VG +LV MY KC   G +DD+ K F+   D + ++W+A+ITGY Q+G    EA+
Sbjct: 245 LLSIASVGNALVTMYGKC---GCLDDALKTFELSGDKDDITWSAMITGYAQAGD-SHEAL 300

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            LF +M      P+ FTF  V+ AC ++      +Q++ +++K G         +L+ MY
Sbjct: 301 NLFYNMHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMY 360

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+ G + DARK F+ L E ++V + +M+  YA+N  +E A  L   ++   +     T A
Sbjct: 361 AKCGSLVDARKGFDYLKEPDIVLWTSMISGYAQNGENETALTLYCRMQMERIMPHELTMA 420

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+L   SS+ A+ +G+QIHA+ IK GF     I +AL +MY++C ++E    VF+ M  R
Sbjct: 421 SVLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSR 480

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           ++++W +MI+G +++G   +ALE+F ++     KP+ +T++ VLSACSH GL+  G  +F
Sbjct: 481 DIMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERGKVYF 540

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
           R M DE GIV R+EHYACMVD+L R+G L E  EFI S  +   + +WR  LGACR + +
Sbjct: 541 RMMLDEFGIVPRVEHYACMVDILSRAGKLHETKEFIESATIDHGMCLWRILLGACRNYRN 600

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            ELG +A E ++E   Q+ +A+ILLS++Y + G  + V  +R+ MK R + KE GCSWIE
Sbjct: 601 YELGAYAGEKLMELGSQESSAYILLSSIYTALGRSDDVERVRRLMKLRGVNKEPGCSWIE 660

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY--LPDTN 775
             ++VH F VG+  HP+ ++I +EL +L   +K+  Y    DTN
Sbjct: 661 LKSQVHVFVVGDQIHPQIVKICSELRRLRDHMKDECYESFNDTN 704



 Score =  224 bits (572), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 144/487 (29%), Positives = 262/487 (53%), Gaps = 18/487 (3%)

Query: 44  EPLSNRLIYHLN---DGRVQKAI----FTLDL---MTQKGNHPDLDTYSLLLKSCIRSRN 93
           E ++N+ +   N   +G  QK      F ++L   M  +   P+  T+S +  +   S  
Sbjct: 69  ESITNKDVVSWNCLINGYSQKGTVGYSFVMELFQRMRAENTLPNGHTFSGVFTAASSSPE 128

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
              G   H+L  ++    +  + +SLI++Y K G + +A K+F ++  +R+ VSW+++IS
Sbjct: 129 TFGGLQAHALAIKTSNFYDVFVGSSLINMYCKIGCMLDARKVFDTI-PERNTVSWATIIS 187

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            Y       +A  +F  M       +++ +++V+ A +  + V  G  I+   LK G   
Sbjct: 188 GYAMERMAFEAWELFXLMRREEGAHDKFIYTSVLSALTVPDLVHYGKQIHCLALKNGLL- 246

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           S   VG AL+ M+ K    L+ A K F+   +K+ + W+ MIT   Q G   +A+ LF +
Sbjct: 247 SIASVGNALVTMYGKCGC-LDDALKTFELSGDKDDITWSAMITGYAQAGDSHEALNLFYN 305

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M L+G  P  FT  GV++ACS++     GKQ+H ++++ G    +    +LVDMYAKC  
Sbjct: 306 MHLNGNKPSEFTFVGVINACSDIGALEEGKQIHGYSLKAGYECQIYFMTALVDMYAKC-- 363

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            GS+ D+RK FD + + +++ WT++I+GY Q+ G ++ A+ L+  M   ++ P+  T AS
Sbjct: 364 -GSLVDARKGFDYLKEPDIVLWTSMISGYAQN-GENETALTLYCRMQMERIMPHELTMAS 421

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           VL+AC +L      +Q++   +K G +L+  +G++L +MYA+ G +ED    F  +  ++
Sbjct: 422 VLRACSSLAALEQGKQIHAQTIKYGFSLEVPIGSALSTMYAKCGSLEDGNLVFRRMPSRD 481

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           ++++N M+   ++N    KA EL  E+          TF ++LS  S +G + +G +++ 
Sbjct: 482 IMTWNAMISGLSQNGEGLKALELFEELRHGTTKPDYVTFVNVLSACSHMGLVERG-KVYF 540

Query: 514 RIIKSGF 520
           R++   F
Sbjct: 541 RMMLDEF 547


>gi|302824721|ref|XP_002994001.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
 gi|300138163|gb|EFJ04941.1| hypothetical protein SELMODRAFT_138033 [Selaginella moellendorffii]
          Length = 948

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 248/822 (30%), Positives = 448/822 (54%), Gaps = 25/822 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G   +A+  L L   K    D    ++ +++    R+  LG+  H  + R   + +
Sbjct: 139 YVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLD 198

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSM---GNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + +  SLI +YS CG++  A + F          D+VSW+ ++++       + A+ +F 
Sbjct: 199 AGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFD 258

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            M E G  P+  CF  V+ +     ++A G  I+  +L     + D  VG A++ M+ + 
Sbjct: 259 RMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLD-RELERDSMVGTAVVKMYARI 317

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           GS+  + A + FD++ +     WT+++    +LG     +++   M   G  P+  T   
Sbjct: 318 GSI--QDACRAFDRIDQPGVAAWTVLVGAYCRLGSFNSVMQILERMEAEGVKPNEVTFIT 375

Query: 289 VVSACSELELFTSGKQLHSWA---IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           ++  C  L L   GK++ + A    +  L     +G +++ M+++ +   S+  +R+ FD
Sbjct: 376 ILDTCKNLAL-EDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFS---SMILAREAFD 431

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           ++   +V ++TA+I GY  +  + +EA+ +F +MI+ +VA ++   A  + AC ++ D  
Sbjct: 432 KISQKSVAAYTAMIAGYANNK-QPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLE 490

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             + ++  A+  G   DD V  +L+ MY+R G MEDA   F  +   + V+++ M+ A  
Sbjct: 491 EGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTVAWSAMIAALG 550

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNH 524
           ++ +   A  +   ++  G   S  T   +L+  +  G I +   ++H+ ++  GF+S+ 
Sbjct: 551 RHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAARKVHSLLVDGGFDSDP 610

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF---AKHGFAARALEIFYKM 581
            +  A++ MY++  +++ A   F ++E+ +V +WT+M+  +    K+  + RAL++   M
Sbjct: 611 EVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMM 670

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
             DG+ P+ +T++ +L+AC++ G + E  ++F+ M  ++G+V  MEHY  +VD + R G 
Sbjct: 671 QQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGY 730

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE-QDPQDPAAHILLSN 700
           L EA + IR +PL  + ++W   L  C+   D    +   E+I++  +  DP    L + 
Sbjct: 731 LQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDP----LGTG 786

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
            +  A  WE    +RK M +R + KE G S I   N VH F  G+ SHP T EIYAE+D+
Sbjct: 787 AHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEVDR 846

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +   IK+ GY+PDT +VLH++ E++K + L+ HSE++A+A+G ++T   +P+RV KNLRV
Sbjct: 847 ITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRV 906

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
           CGDCHTA K  + V  REI++RD+ RFHH  KDG CSC DYW
Sbjct: 907 CGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  272 bits (696), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 182/659 (27%), Positives = 320/659 (48%), Gaps = 30/659 (4%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D+D+Y  +L+ C R R    G  VH  + RS++E    + N L+ +Y+  G+  EA +IF
Sbjct: 62  DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             +G+  +++S+++++ +YV  G   +A+ +        F  +    +  + A     ++
Sbjct: 122 DGLGS-HNVLSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPSMLAMAVEAAGMKRDL 180

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD----KMTEKNTVGWT 252
           ++G   +  + +CGY D D  V  +LI M+     ++E+A + FD    +    + V WT
Sbjct: 181 SLGRFFHDTIRRCGY-DLDAGVAISLIGMYSNCG-EIEAAVQAFDRAFLRAPSSDVVSWT 238

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            ++  C +      A+ LF  M   G +PDR     V+ +   L     GK++HS  +  
Sbjct: 239 KILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDR 298

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            L  D  VG ++V MYA+    GS+ D+ + FDR+    V +WT ++  Y + G  +   
Sbjct: 299 ELERDSMVGTAVVKMYARI---GSIQDACRAFDRIDQPGVAAWTVLVGAYCRLGSFN-SV 354

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLI 430
           +++   M    V PN  TF ++L  C NL   +  +     + ++ R+LD    +G ++I
Sbjct: 355 MQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVI 414

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            M++R   M  AR+AF+ + +K++ +Y  M+  YA N    +A  +  E+    V     
Sbjct: 415 GMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNL 474

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
             A  +S  +SI  + +G+ +H   +  G   +  +  AL+ MYSRC ++E A  VF E+
Sbjct: 475 VLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEI 534

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           E  + ++W++MI    +HG    A+ +  +M  DG +P+G T + VL+AC+HAG+I E  
Sbjct: 535 ERPDTVAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPSGATMVGVLAACAHAGMIEEAA 594

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA-CR 669
           +   S+  + G     E    ++ +  + GS+ EA      +  + DV  W T L A CR
Sbjct: 595 RKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCR 653

Query: 670 VHGDTELGKHAAE-------MILEQDPQDPAAHILLSNLYASA--GHWEYVANIRKRMK 719
                 LGK+ A         +++QD   P     +  L A A  GH +      K MK
Sbjct: 654 ------LGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMK 706



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 140/313 (44%), Gaps = 8/313 (2%)

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHF-TFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           +S G D   ++ F  +I  +  P    ++  VL+ C  L       +V+ H  +     +
Sbjct: 38  KSRGEDFRELQEFLRIIDARDEPFDVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAE 97

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             VGN L+ MYA  G   +AR+ F+ L   N++S+  ++ AY    + ++A ++LH    
Sbjct: 98  RFVGNDLVFMYAAFGNPGEARRIFDGLGSHNVLSFTAIMRAYVTAGDPDEALKILHLARL 157

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
                     A  +  A     +  G   H  I + G++ +  +  +LI MYS C  +EA
Sbjct: 158 KAFKADPSMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLDAGVAISLIGMYSNCGEIEA 217

Query: 543 AFQVFKEMEDR----NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           A Q F     R    +V+SWT ++    +H     AL++F +M   G+ P+ I ++ VL 
Sbjct: 218 AVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLD 277

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           +    G I++G K   SM  +  + +       +V +  R GS+ +A      +     V
Sbjct: 278 SVIGLGDIAQG-KRIHSMVLDRELERDSMVGTAVVKMYARIGSIQDACRAFDRID-QPGV 335

Query: 659 LVWRTFLGA-CRV 670
             W   +GA CR+
Sbjct: 336 AAWTVLVGAYCRL 348


>gi|357480897|ref|XP_003610734.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512069|gb|AES93692.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 726

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 241/655 (36%), Positives = 368/655 (56%), Gaps = 36/655 (5%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELE 297
           VF ++   +T     ++   ++   P   I L+ ++  ++ F  DRF+   ++ A S++ 
Sbjct: 76  VFSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVS 135

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
            F  G ++H  A + G   D  +   L+ MYA C     + D+R +FD+M   + ++W  
Sbjct: 136 AFNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCR---RIMDARLLFDKMCHPDAVAWNM 192

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           II GY Q+G  D +A++LF DM    + P+     +VL ACG+  + +    ++      
Sbjct: 193 IIDGYCQNGHYD-DALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDN 251

Query: 418 GRALDDCVGNSLISMYARSGRME-------------------------------DARKAF 446
           G A+D  +  +LI+MYA  G M+                               DAR  F
Sbjct: 252 GYAIDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIF 311

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + + E++LV ++ M+  YA++   ++A +L  E+          T  S++S  S +GA+ 
Sbjct: 312 DQMIERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALA 371

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +   IH  + +SGF     + NALI MY++C N+  A +VF+ M  +NVISW+SMI  FA
Sbjct: 372 QANWIHTYVDRSGFGRALSVNNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFA 431

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            HG A  A+++F +M    I+PNG+T+I VL AC HAGL+ EG K F SM +EHGI    
Sbjct: 432 MHGNADSAIKLFRRMKEVNIEPNGVTFIGVLYACGHAGLVEEGEKLFSSMINEHGISPTR 491

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EHY CMVDL  R+  L +A+E I +MP + +V++W + + AC+VHG+ ELG+ AA+ +LE
Sbjct: 492 EHYGCMVDLYCRANFLRKAIELIETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLE 551

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            +P    A ++LSN+YA    W  V  IRK M  + + KE   S IE +N+VH F + + 
Sbjct: 552 LEPDHDGALVVLSNIYAKEKRWNDVGLIRKSMSYKGISKEKASSRIEINNQVHMFMMADR 611

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
            H ++ EIY +LD++  K+K  GY P T+ +L +LEEE K + +  HSEK+AV +GLIS 
Sbjct: 612 YHKQSDEIYEKLDEVVSKLKLVGYKPSTSGILIDLEEEDKKELVLWHSEKLAVCYGLISR 671

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
                IR+ KNLR+C DCH+ +K +S V   EIV+RD  RFHH   G CSC DYW
Sbjct: 672 RNESCIRIVKNLRICEDCHSFMKLVSKVYQIEIVVRDRTRFHHCSGGICSCRDYW 726



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 233/526 (44%), Gaps = 83/526 (15%)

Query: 36  FIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSL--LLKSCIRSRN 93
           F   P      SN+L+ HL+     +    L    +  N   LD +S   LLK+  +   
Sbjct: 77  FSQIPNPHTHFSNQLLRHLSRSSFPEKTIFLYHNLRAINAFALDRFSFPSLLKAVSKVSA 136

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           F+ G  +H L ++     +  I   LI++Y+ C  + +A  +F  M +  D V+W+ +I 
Sbjct: 137 FNHGLEIHGLASKLGFVDDPFIQTGLIAMYASCRRIMDARLLFDKMCHP-DAVAWNMIID 195

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            Y   G   DA+ +F +M      P+      V+ AC +  N++ G  I+ F+   GY  
Sbjct: 196 GYCQNGHYDDALRLFEDMRSSDMKPDSVILCTVLSACGHAGNLSYGRTIHEFVKDNGY-A 254

Query: 214 SDVCVGCALIDMFVK-GSVDL-----------------------------ESAYKVFDKM 243
            D  +  ALI+M+   G++DL                             + A  +FD+M
Sbjct: 255 IDSHLQTALINMYANCGAMDLARKIYDGLSSKHLIVSTAMLSGYAKLGMVKDARFIFDQM 314

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            E++ V W+ MI+   +   P++A++LF +M+    +PD+ T+  V+SACS +       
Sbjct: 315 IERDLVCWSAMISGYAESDQPQEALKLFDEMLQKRSVPDQITMLSVISACSHVGALAQAN 374

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            +H++  R+G    + V  +L+DMYAKC   G++  +R+VF+ M   NV+SW+++I  + 
Sbjct: 375 WIHTYVDRSGFGRALSVNNALIDMYAKC---GNLVKAREVFENMPRKNVISWSSMINAFA 431

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
             G  D  A+KLF  M +  + PN  TF  VL ACG+                       
Sbjct: 432 MHGNAD-SAIKLFRRMKEVNIEPNGVTFIGVLYACGH----------------------- 467

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNLNSEKAFELLH 478
                       +G +E+  K F S+  ++ +S     Y  MVD Y +     KA EL  
Sbjct: 468 ------------AGLVEEGEKLFSSMINEHGISPTREHYGCMVDLYCRANFLRKAIEL-- 513

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
            IE      +   + SL+S     G    GE    R+++   E +H
Sbjct: 514 -IETMPFAPNVIIWGSLMSACQVHGEAELGEFAAKRLLE--LEPDH 556


>gi|449475140|ref|XP_004154387.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
 gi|449522468|ref|XP_004168248.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Cucumis sativus]
          Length = 574

 Score =  455 bits (1170), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 223/575 (38%), Positives = 351/575 (61%), Gaps = 5/575 (0%)

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + ++ +C   +    GKQLH+   + G++ +  +   LV++Y  C    S+ ++  +FDR
Sbjct: 5   ASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICN---SLTNAHLLFDR 61

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           +   N+  W  +I GY  +G  +  A+ L+  M    + P+ FTF  VLKAC  L     
Sbjct: 62  ISKRNLFLWNVMIRGYAWNGPYEL-AISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEE 120

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            ++++   ++ G   D  VG +LI MYA+ G +E AR+ F+ + E+++V +N+M+  Y++
Sbjct: 121 GKKIHKDVIRSGLESDVFVGAALIDMYAKCGCVESARQVFDKIDERDVVCWNSMLATYSQ 180

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N   +++  L   +   G+  +  TF   ++ ++  G + +G+++H    + GFESN  +
Sbjct: 181 NGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESNDKV 240

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             AL+ MY++  +V  A  +F+ +E++ V+SW +MITG+A HG A  AL++F +M    +
Sbjct: 241 KTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEMKGK-V 299

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
            P+ IT++ VL+ACSH GL++EG  HFRSM  +  I   ++HY CM+DLLG  G L EA 
Sbjct: 300 LPDHITFVGVLAACSHGGLLNEGKMHFRSMISDFNIWPTVQHYTCMIDLLGHCGRLEEAY 359

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           + I  M +  D  VW   L +C++HG+ E+G+ A E ++E +P D   +++LSN+YA AG
Sbjct: 360 KLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPDDGGNYVILSNMYAQAG 419

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W+ VA +R  M  + L K   CSWIE  NKVH F   +TSHPK+  IYAEL +    +K
Sbjct: 420 KWDGVARLRDLMMNKGLKKSIACSWIEVGNKVHAFLSEDTSHPKSEAIYAELKRTGKLMK 479

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY P    V H++E+++KV  +  HSE++A+AFGLISTS    + + KNLR+C DCH 
Sbjct: 480 EAGYAPQVGSVFHDVEDDEKVDMVSCHSERLAIAFGLISTSAGTKLLIIKNLRICEDCHV 539

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           AIK+IS +T REI +RD NR+HH KDG CSC D+W
Sbjct: 540 AIKFISKITEREITIRDVNRYHHFKDGVCSCGDFW 574



 Score =  185 bits (470), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/328 (34%), Positives = 185/328 (56%), Gaps = 10/328 (3%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +  Y+ LL+SC+  +    GK +H+ + +  +  N ++   L++LY  C  L  A+ +F 
Sbjct: 1   MSYYASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFD 60

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            + +KR++  W+ MI  Y   G    AI ++ +M + G  P+++ F  V++ACS    + 
Sbjct: 61  RI-SKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAME 119

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  I+  +++ G  +SDV VG ALIDM+ K    +ESA +VFDK+ E++ V W  M+  
Sbjct: 120 EGKKIHKDVIRSG-LESDVFVGAALIDMYAKCGC-VESARQVFDKIDERDVVCWNSMLAT 177

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
            +Q G P +++ L   M  +G  P   T    ++A ++  L   GK+LH ++ R G   +
Sbjct: 178 YSQNGQPDESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHGYSWRHGFESN 237

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             V  +L+DMYAK    GSV+ +R +F+ + +  V+SW A+ITGY    G   EA+ LF 
Sbjct: 238 DKVKTALMDMYAK---SGSVNVARSLFELLEEKRVVSWNAMITGYAMH-GHANEALDLFK 293

Query: 378 DMIQGQVAPNHFTFASVLKAC--GNLLD 403
           +M +G+V P+H TF  VL AC  G LL+
Sbjct: 294 EM-KGKVLPDHITFVGVLAACSHGGLLN 320



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 197/378 (52%), Gaps = 16/378 (4%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L +A+ +FD+++++N   W +MI      G    AI L+  M   G +PD+FT   V+ A
Sbjct: 52  LTNAHLLFDRISKRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKA 111

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS L     GK++H   IR+GL  DV VG +L+DMYAKC   G V+ +R+VFD++ + +V
Sbjct: 112 CSALSAMEEGKKIHKDVIRSGLESDVFVGAALIDMYAKC---GCVESARQVFDKIDERDV 168

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           + W +++  Y Q+G  D E++ L   M    + P   TF   + A  +       ++++ 
Sbjct: 169 VCWNSMLATYSQNGQPD-ESLALCRVMAFNGLKPTEGTFVISIAASADNGLLPQGKELHG 227

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           ++ + G   +D V  +L+ MYA+SG +  AR  FE L EK +VS+N M+  YA + ++ +
Sbjct: 228 YSWRHGFESNDKVKTALMDMYAKSGSVNVARSLFELLEEKRVVSWNAMITGYAMHGHANE 287

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNAL 530
           A +L  E++   V     TF  +L+  S  G + +G ++H R + S F     +  Y  +
Sbjct: 288 ALDLFKEMKGK-VLPDHITFVGVLAACSHGGLLNEG-KMHFRSMISDFNIWPTVQHYTCM 345

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGI 586
           I +   C  +E A+++  EM  + +   W +++     HG       ALE   ++  D  
Sbjct: 346 IDLLGHCGRLEEAYKLIMEMRVEPDAGVWGALLHSCKIHGNVEMGELALEKLVELEPD-- 403

Query: 587 KPNGITYIAVLSACSHAG 604
             +G  Y+ + +  + AG
Sbjct: 404 --DGGNYVILSNMYAQAG 419



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 50/403 (12%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  + AI     M   G  PD  T+  +LK+C        GK +H  + RS LE +  +
Sbjct: 80  NGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKKIHKDVIRSGLESDVFV 139

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +LI +Y+KCG +  A ++F  + ++RD+V W+SM+++Y   G+  +++ +   M   G
Sbjct: 140 GAALIDMYAKCGCVESARQVFDKI-DERDVVCWNSMLATYSQNGQPDESLALCRVMAFNG 198

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P E  F   I A ++   +  G  ++G+  + G F+S+  V  AL+DM+ K GSV++ 
Sbjct: 199 LKPTEGTFVISIAASADNGLLPQGKELHGYSWRHG-FESNDKVKTALMDMYAKSGSVNV- 256

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +F+ + EK  V W  MIT     G   +A+ LF +M     LPD  T  GV++ACS
Sbjct: 257 -ARSLFELLEEKRVVSWNAMITGYAMHGHANEALDLFKEM-KGKVLPDHITFVGVLAACS 314

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              L   GK +H  ++ +   +   V       +  C +D            +L H    
Sbjct: 315 HGGLLNEGK-MHFRSMISDFNIWPTV------QHYTCMID------------LLGH---- 351

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
                       GR +EA KL  +M   +V P+   + ++L +C   +  NV  ++   A
Sbjct: 352 -----------CGRLEEAYKLIMEM---RVEPDAGVWGALLHSCK--IHGNV--EMGELA 393

Query: 415 VKRGRALD-DCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
           +++   L+ D  GN +I  +MYA++G+ +   +  + +  K L
Sbjct: 394 LEKLVELEPDDGGNYVILSNMYAQAGKWDGVARLRDLMMNKGL 436



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 51/184 (27%), Positives = 89/184 (48%), Gaps = 2/184 (1%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           +ASLL       AI  G+Q+HARI + G   N  +   L+++Y  C ++  A  +F  + 
Sbjct: 4   YASLLQSCVVRKAIEPGKQLHARICQVGISFNPLLATKLVNLYCICNSLTNAHLLFDRIS 63

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            RN+  W  MI G+A +G    A+ ++Y+M   G+ P+  T+  VL ACS    + EG K
Sbjct: 64  KRNLFLWNVMIRGYAWNGPYELAISLYYQMRDYGLVPDKFTFPFVLKACSALSAMEEGKK 123

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
             + +    G+   +   A ++D+  + G +  A +    +    DV+ W + L     +
Sbjct: 124 IHKDVI-RSGLESDVFVGAALIDMYAKCGCVESARQVFDKID-ERDVVCWNSMLATYSQN 181

Query: 672 GDTE 675
           G  +
Sbjct: 182 GQPD 185


>gi|15231358|ref|NP_187990.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75273354|sp|Q9LIC3.1|PP227_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g13770, mitochondrial; Flags: Precursor
 gi|9294022|dbj|BAB01925.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332641888|gb|AEE75409.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 628

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 225/576 (39%), Positives = 352/576 (61%), Gaps = 6/576 (1%)

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            +++AC +      G+++H+  I+T       +   L+  Y KC     ++D+RKV D M
Sbjct: 57  ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC---LEDARKVLDEM 113

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            + NV+SWTA+I+ Y Q+G    EA+ +F++M++    PN FTFA+VL +C       + 
Sbjct: 114 PEKNVVSWTAMISRYSQTG-HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +Q++   VK        VG+SL+ MYA++G++++AR+ FE L E+++VS   ++  YA+ 
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              E+A E+ H +   G+  +  T+ASLL+  S +  +  G+Q H  +++        + 
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-I 586
           N+LI MYS+C N+  A ++F  M +R  ISW +M+ G++KHG     LE+F  M  +  +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMY-DEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           KP+ +T +AVLS CSH  +   G   F  M   E+G     EHY C+VD+LGR+G + EA
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
            EFI+ MP      V  + LGACRVH   ++G+     ++E +P++   +++LSNLYASA
Sbjct: 413 FEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W  V N+R  M ++ + KE G SWI+ +  +H FH  + +HP+  E+ A++ ++++K+
Sbjct: 473 GRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM 532

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           K+ GY+PD + VL++++EEQK + L  HSEK+A+ FGLI+T +  PIRVFKNLR+C DCH
Sbjct: 533 KQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCH 592

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              K  S V  RE+ LRD NRFH I DG CSC DYW
Sbjct: 593 NFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628



 Score =  192 bits (489), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 208/398 (52%), Gaps = 27/398 (6%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++GR+Q+A+  + ++   G       Y  LL +C+  R    G+ VH+ + +++  P + 
Sbjct: 32  SNGRLQEALLEMAML---GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATY 88

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +   L+  Y KC  L +A K+   M  K ++VSW++MIS Y   G   +A+ +F EM+  
Sbjct: 89  LRTRLLIFYGKCDCLEDARKVLDEMPEK-NVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              PNE+ F+ V+ +C     + +G  I+G ++K  Y DS + VG +L+DM+ K    ++
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY-DSHIFVGSSLLDMYAKAG-QIK 205

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A ++F+ + E++ V  T +I    QLG   +A+ +F  +   G  P+  T + +++A S
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L L   GKQ H   +R  L     +  SL+DMY+KC   G++  +R++FD M +   +S
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC---GNLSYARRLFDNMPERTAIS 322

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACG---------NLLDS 404
           W A++ GY +  G  +E ++LF  M  + +V P+  T  +VL  C          N+ D 
Sbjct: 323 WNAMLVGYSKH-GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            VA +   +  K G     C+    + M  R+GR+++A
Sbjct: 382 MVAGE---YGTKPGTEHYGCI----VDMLGRAGRIDEA 412



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 209/410 (50%), Gaps = 22/410 (5%)

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           IS   + G+  +A+   +EM  LG     + + A++ AC +   +  G  ++  ++K  Y
Sbjct: 27  ISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83

Query: 212 FDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
             +       LI     G  D LE A KV D+M EKN V WT MI+R +Q G   +A+ +
Sbjct: 84  LPATYLRTRLLI---FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTV 140

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F +M+ S   P+ FT + V+++C        GKQ+H   ++      + VG SL+DMYAK
Sbjct: 141 FAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 200

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
               G + ++R++F+ + + +V+S TAII GY Q  G D+EA+++F  +    ++PN+ T
Sbjct: 201 A---GQIKEAREIFECLPERDVVSCTAIIAGYAQL-GLDEEALEMFHRLHSEGMSPNYVT 256

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           +AS+L A   L   +  +Q + H ++R       + NSLI MY++ G +  AR+ F+++ 
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGE 509
           E+  +S+N M+  Y+K+    +  EL   + D   V   A T  ++LSG S       G 
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376

Query: 510 QIHARII------KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
            I   ++      K G E   CI    + M  R   ++ AF+  K M  +
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCI----VDMLGRAGRIDEAFEFIKRMPSK 422



 Score = 86.7 bits (213), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 11/184 (5%)

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           E L E+   G     + + +LL+      A+  G+++HA +IK+ +     +   L+  Y
Sbjct: 38  EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C  +E A +V  EM ++NV+SWT+MI+ +++ G ++ AL +F +M+    KPN  T+ 
Sbjct: 98  GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157

Query: 595 AVLSACSHAGLISEGWKHFRSM-----YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            VL++C  A  +  G K    +     YD H  V      + ++D+  ++G + EA E  
Sbjct: 158 TVLTSCIRASGLGLG-KQIHGLIVKWNYDSHIFVG-----SSLLDMYAKAGQIKEAREIF 211

Query: 650 RSMP 653
             +P
Sbjct: 212 ECLP 215


>gi|255543413|ref|XP_002512769.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547780|gb|EEF49272.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 684

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 237/667 (35%), Positives = 384/667 (57%), Gaps = 41/667 (6%)

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S DL+ A  +FDK+ E +   WT++I+  TQ G P+ AI ++  ++     PD+F L  V
Sbjct: 24  SGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSV 83

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
             AC+        K++H  AI+ G   D+ +G +L+DM+ KC     V+ +R VFD M+ 
Sbjct: 84  AKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKF---VNGARCVFDDMVV 140

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT++   YV  G   ++ + LF +M    +  N  T +S+L AC + +   +  +
Sbjct: 141 KDVVSWTSMTYCYVNCG-MCRQGILLFREMGLNGIRANSLTVSSILPACADYI--KLGRE 197

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+   ++     +  V ++L++MYA S  ++ AR  F+S++ +++VS+N M+ AY  N  
Sbjct: 198 VHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVMLTAYFLNKE 257

Query: 470 SEKAFELLHEI-----------------------------------EDTGVGTSAYTFAS 494
            E+   L H++                                   +D+G+  +  T  S
Sbjct: 258 YERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGIKPNRITIVS 317

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
            L G +++ ++  G++IH  + +  F  +  I  AL+ +Y++C ++E +  VF  M  ++
Sbjct: 318 ALPGCTNLESLRGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSRHVFNTMPRKD 377

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V++W +MI   + HG    +L +F KML  G++PN +T+I VLS CSH+ L  EG   F 
Sbjct: 378 VVAWNTMIMANSMHGKGGESLILFNKMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFN 437

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM  EH I    +HY+CMVD+L R+G L EA +FIR MP+      W   LGACRV+ + 
Sbjct: 438 SMSSEHSITPDADHYSCMVDVLSRAGRLEEAYDFIRKMPIEPTAAAWGALLGACRVYKNV 497

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           ELG  AA  + E +P +   ++LLSN+  +A  W   + IRK M+++ L K  G SW++ 
Sbjct: 498 ELGTLAASQLFEIEPDNAGNYVLLSNILVTAKKWVEASEIRKMMRDKGLAKTPGRSWVQV 557

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
            NKV+ F  G+ S+ +   IY  LD++  K++  GY P+T+FVL  +++EQ+ + L  HS
Sbjct: 558 KNKVYSFVTGDKSNEQKDMIYRFLDEIDEKMRLDGYQPNTDFVLQNVDQEQREETLCSHS 617

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           E++AVAFG++++S    +RVFKNLR+CGDCH AIK I+ + G +I++RDS RFHH +DG 
Sbjct: 618 ERLAVAFGILNSSGKTTVRVFKNLRICGDCHNAIKLIAKIVGMQIIVRDSLRFHHFRDGY 677

Query: 855 CSCNDYW 861
           C+CND+W
Sbjct: 678 CTCNDFW 684



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/426 (27%), Positives = 193/426 (45%), Gaps = 45/426 (10%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   G  +KAI     +  +   PD      + K+C  S +  + K +H    +     +
Sbjct: 52  HTQHGFPKKAIDIYSTLLSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKD 111

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V+ N+LI ++ KC  +N A  +F  M  K D+VSW+SM   YVN G     I +F EM 
Sbjct: 112 LVLGNALIDMFGKCKFVNGARCVFDDMVVK-DVVSWTSMTYCYVNCGMCRQGILLFREMG 170

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   N    S+++ AC++   + +G  ++GF+L+    + +V V  AL++M+   S+ 
Sbjct: 171 LNGIRANSLTVSSILPACADY--IKLGREVHGFILR-NEMEGNVYVSSALVNMYA-SSLG 226

Query: 233 LESAYKVFDKMTEKNTVGWTLMITR----------------------------------- 257
           L+ A  VFD M  ++ V W +M+T                                    
Sbjct: 227 LKQARLVFDSMYHRDIVSWNVMLTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISG 286

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
           C Q G    A+ +   M  SG  P+R T+   +  C+ LE    GK++H +  R     D
Sbjct: 287 CMQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIED 346

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V +  +LV +YAKC   G ++ SR VF+ M   +V++W  +I       G+  E++ LF+
Sbjct: 347 VTITTALVLLYAKC---GDLELSRHVFNTMPRKDVVAWNTMIMANSMH-GKGGESLILFN 402

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMYARS 436
            M+   V PN  TF  VL  C +   ++    V+           D    S ++ + +R+
Sbjct: 403 KMLDSGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRA 462

Query: 437 GRMEDA 442
           GR+E+A
Sbjct: 463 GRLEEA 468



 Score =  143 bits (361), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 177/386 (45%), Gaps = 40/386 (10%)

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
           C  + +   C   G +  +  +FD++ + ++ +WT +I+G+ Q  G  K+A+ ++S ++ 
Sbjct: 12  CQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQH-GFPKKAIDIYSTLLS 70

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V P+ F   SV KAC    D  VA++++  A++ G   D  +GN+LI M+ +   +  
Sbjct: 71  RNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFVNG 130

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           AR  F+ +  K++VS+ +M   Y       +   L  E+   G+  ++ T +S+L   + 
Sbjct: 131 ARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPACAD 190

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
              I  G ++H  I+++  E N  + +AL++MY+    ++ A  VF  M  R+++SW  M
Sbjct: 191 Y--IKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSMYHRDIVSWNVM 248

Query: 562 IT-----------------------------------GFAKHGFAARALEIFYKMLADGI 586
           +T                                   G  ++G    AL I  KM   GI
Sbjct: 249 LTAYFLNKEYERGLGLFHQMRKEGIKLNQASWNAAISGCMQNGQHELALGILCKMQDSGI 308

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           KPN IT ++ L  C++   +  G K        H  ++ +     +V L  + G L  + 
Sbjct: 309 KPNRITIVSALPGCTNLESL-RGGKEIHGYVFRHWFIEDVTITTALVLLYAKCGDLELSR 367

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHG 672
               +MP   DV+ W T + A  +HG
Sbjct: 368 HVFNTMP-RKDVVAWNTMIMANSMHG 392



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 120/263 (45%), Gaps = 16/263 (6%)

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           L  C    LI     SG ++ A   F+ + E +L ++  ++  + ++   +KA ++   +
Sbjct: 9   LQPCQSIKLIKTCLNSGDLKRALYLFDKIPEPDLRTWTILISGHTQHGFPKKAIDIYSTL 68

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
               V    +   S+    ++ G +   ++IH   I+ GF  +  + NALI M+ +C  V
Sbjct: 69  LSRNVRPDKFVLLSVAKACAASGDLVVAKKIHDDAIQFGFNKDLVLGNALIDMFGKCKFV 128

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A  VF +M  ++V+SWTSM   +   G   + + +F +M  +GI+ N +T  ++L AC
Sbjct: 129 NGARCVFDDMVVKDVVSWTSMTYCYVNCGMCRQGILLFREMGLNGIRANSLTVSSILPAC 188

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEH------YACMVDLLGRSGSLTEALEFIRSMPL 654
           +          + +   + HG + R E        + +V++   S  L +A     SM  
Sbjct: 189 A---------DYIKLGREVHGFILRNEMEGNVYVSSALVNMYASSLGLKQARLVFDSM-Y 238

Query: 655 SADVLVWRTFLGACRVHGDTELG 677
             D++ W   L A  ++ + E G
Sbjct: 239 HRDIVSWNVMLTAYFLNKEYERG 261



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 2/190 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G+ + A+  L  M   G  P+  T    L  C    +   GK +H  + R     + 
Sbjct: 288 MQNGQHELALGILCKMQDSGIKPNRITIVSALPGCTNLESLRGGKEIHGYVFRHWFIEDV 347

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            I  +L+ LY+KCGDL  +  +F +M  ++D+V+W++MI +    GK  +++ +F +ML+
Sbjct: 348 TITTALVLLYAKCGDLELSRHVFNTMP-RKDVVAWNTMIMANSMHGKGGESLILFNKMLD 406

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PN   F  V+  CS+++    G +++  +        D      ++D+  +    L
Sbjct: 407 SGVEPNSVTFIGVLSGCSHSQLADEGLLVFNSMSSEHSITPDADHYSCMVDVLSRAG-RL 465

Query: 234 ESAYKVFDKM 243
           E AY    KM
Sbjct: 466 EEAYDFIRKM 475


>gi|356533814|ref|XP_003535453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Glycine max]
          Length = 782

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/775 (33%), Positives = 411/775 (53%), Gaps = 86/775 (11%)

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+H    +L  GF P     + +I     + N+     ++  + K      D+     ++
Sbjct: 17  AVH--AHILTSGFKPFPLIINRLIDHYCKSFNIPYARYLFDKIPK-----PDIVAATTML 69

Query: 224 DMFVKGSVDLESAYKVFD--KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
             +   + +++ A+++F+   M+ ++TV +  MIT  +       A++LF+ M   GF+P
Sbjct: 70  SAY-SAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLFVQMKRLGFVP 128

Query: 282 DRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD- 339
           D FT S V+ A S + +  T  +QLH    + G      V  +L+  Y  C     V+  
Sbjct: 129 DPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVSCASSPLVNSC 188

Query: 340 -----SRKVFDR---------------------------------MLDHNVMSWTAIITG 361
                +RK+FD                                  M DH  ++W A+I+G
Sbjct: 189 VLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHIAVAWNAMISG 248

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA----VKR 417
           YV  G  + EA  L   M    +  + +T+ SV+ A  N    N+  QV+ +     V+ 
Sbjct: 249 YVHRGFYE-EAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQP 307

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN------------------- 458
                  V N+LI++Y R G++ +AR+ F+ +  K+LVS+N                   
Sbjct: 308 SGHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIF 367

Query: 459 ------------TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
                        M+   A+N   E+  +L ++++  G+    Y +A  ++  S +G++ 
Sbjct: 368 REMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLD 427

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
            G+Q+H++II+ G +S+  + NALI+MYSRC  VEAA  VF  M   + +SW +MI   A
Sbjct: 428 NGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVDSVSWNAMIAALA 487

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           +HG   +A++++ KML + I P+ IT++ +LSACSHAGL+ EG  +F +M   +GI    
Sbjct: 488 QHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFDTMRVCYGITPEE 547

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           +HY+ ++DLL R+G  +EA     SMP      +W   L  C +HG+ ELG  AA+ +LE
Sbjct: 548 DHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNMELGIQAADRLLE 607

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
             PQ    +I LSN+YA+ G W+ VA +RK M+ER + KE GCSWIE +N VH F V + 
Sbjct: 608 LMPQQDGTYISLSNMYAALGQWDEVARVRKLMRERGVKKEPGCSWIEVENMVHVFLVDDA 667

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
            HP+   +Y  L+QL  ++++ GY+PDT FVLH++E EQK   L  HSEK+AV +G++  
Sbjct: 668 VHPEVHAVYRYLEQLVHEMRKLGYVPDTKFVLHDMESEQKEYALSTHSEKLAVVYGIMKL 727

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
                IRVFKNLR+CGDCH A KYIS V  REI++RD  RFHH ++G+CSC++YW
Sbjct: 728 PLGATIRVFKNLRICGDCHNAFKYISKVVDREIIVRDRKRFHHFRNGECSCSNYW 782



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 140/591 (23%), Positives = 263/591 (44%), Gaps = 83/591 (14%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           +P+ V   +++S YS  G++  A+++F +   + RD VS+++MI+++ +      A+ +F
Sbjct: 59  KPDIVAATTMLSAYSAAGNIKLAHQLFNATPMSIRDTVSYNAMITAFSHSHDGHAALQLF 118

Query: 169 VEMLELGFCPNEYCFSAVIRACS------------NTENVAIGHI----IYGFLLKC--G 210
           V+M  LGF P+ + FS+V+ A S            + E    G +    +   L+ C   
Sbjct: 119 VQMKRLGFVPDPFTFSSVLGALSLIADEETHCQQLHCEVFKWGALSVPSVLNALMSCYVS 178

Query: 211 YFDSDVCVGCALI--------------------DMFVKGSV---DLESAYKVFDKMTEKN 247
              S +   C L+                       + G V   DL +A ++ + MT+  
Sbjct: 179 CASSPLVNSCVLMAAARKLFDEAPPGRRDEPAWTTIIAGYVRNDDLVAARELLEGMTDHI 238

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  MI+     G   +A  L   M   G   D +T + V+SA S   LF  G+Q+H+
Sbjct: 239 AVAWNAMISGYVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHA 298

Query: 308 WAIRTGLA----LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           + +RT +       + V  +L+ +Y +C   G + ++R+VFD+M   +++SW AI++G V
Sbjct: 299 YVLRTVVQPSGHFVLSVNNALITLYTRC---GKLVEARRVFDKMPVKDLVSWNAILSGCV 355

Query: 364 QS------------------------------GGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            +                               G  +E +KLF+ M    + P  + +A 
Sbjct: 356 NARRIEEANSIFREMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAG 415

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            + +C  L   +  +Q+++  ++ G      VGN+LI+MY+R G +E A   F ++   +
Sbjct: 416 AIASCSVLGSLDNGQQLHSQIIQLGHDSSLSVGNALITMYSRCGLVEAADTVFLTMPYVD 475

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
            VS+N M+ A A++ +  +A +L  ++    +     TF ++LS  S  G + +G     
Sbjct: 476 SVSWNAMIAALAQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFD 535

Query: 514 RI-IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFA 571
            + +  G       Y+ LI +  R      A  V + M  +     W +++ G   HG  
Sbjct: 536 TMRVCYGITPEEDHYSRLIDLLCRAGMFSEAKNVTESMPFEPGAPIWEALLAGCWIHGNM 595

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
              ++   ++L    + +G TYI++ +  +  G   E  +  R +  E G+
Sbjct: 596 ELGIQAADRLLELMPQQDG-TYISLSNMYAALGQWDEVAR-VRKLMRERGV 644



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 88/352 (25%), Positives = 160/352 (45%), Gaps = 55/352 (15%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G  ++A   L  M   G   D  TY+ ++ +   +  F++G+ VH+ + R+ ++P+
Sbjct: 249 YVHRGFYEEAFDLLRRMHSLGIQLDEYTYTSVISAASNAGLFNIGRQVHAYVLRTVVQPS 308

Query: 113 SVIL----NSLISLYSKCGDLNEANKIFKSMGNK-------------------------- 142
              +    N+LI+LY++CG L EA ++F  M  K                          
Sbjct: 309 GHFVLSVNNALITLYTRCGKLVEARRVFDKMPVKDLVSWNAILSGCVNARRIEEANSIFR 368

Query: 143 ----RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
               R +++W+ MIS     G   + + +F +M   G  P +Y ++  I +CS   ++  
Sbjct: 369 EMPVRSLLTWTVMISGLAQNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDN 428

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  ++  +++ G+ DS + VG ALI M+ +  + +E+A  VF  M   ++V W  MI   
Sbjct: 429 GQQLHSQIIQLGH-DSSLSVGNALITMYSRCGL-VEAADTVFLTMPYVDSVSWNAMIAAL 486

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q G    AI+L+  M+    LPDR T   ++SACS   L   G+            + V
Sbjct: 487 AQHGHGVQAIQLYEKMLKEDILPDRITFLTILSACSHAGLVKEGRHYFD-------TMRV 539

Query: 319 CVGCS--------LVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG 361
           C G +        L+D+  +    G   +++ V + M  +     W A++ G
Sbjct: 540 CYGITPEEDHYSRLIDLLCRA---GMFSEAKNVTESMPFEPGAPIWEALLAG 588



 Score = 65.5 bits (158), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/214 (25%), Positives = 97/214 (45%), Gaps = 21/214 (9%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++ +   + M  +G  P    Y+  + SC    +   G+ +HS + +   + +  
Sbjct: 387 QNGFGEEGLKLFNQMKLEGLEPCDYAYAGAIASCSVLGSLDNGQQLHSQIIQLGHDSSLS 446

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + N+LI++YS+CG +  A+ +F +M    D VSW++MI++    G  V AI ++ +ML+ 
Sbjct: 447 VGNALITMYSRCGLVEAADTVFLTMPYV-DSVSWNAMIAALAQHGHGVQAIQLYEKMLKE 505

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS-DVCVGCA--------LIDM 225
              P+   F  ++ ACS+   V  G           YFD+  VC G          LID+
Sbjct: 506 DILPDRITFLTILSACSHAGLVKEGR---------HYFDTMRVCYGITPEEDHYSRLIDL 556

Query: 226 FVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
             +  +    A  V + M  E     W  ++  C
Sbjct: 557 LCRAGM-FSEAKNVTESMPFEPGAPIWEALLAGC 589


>gi|302785461|ref|XP_002974502.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
 gi|300158100|gb|EFJ24724.1| hypothetical protein SELMODRAFT_101093 [Selaginella moellendorffii]
          Length = 615

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 228/597 (38%), Positives = 359/597 (60%), Gaps = 5/597 (0%)

Query: 266 DAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           DAIR  +D++  SG       L  ++  C+  +    G+++H W     L     +   L
Sbjct: 23  DAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLL 82

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           VDMY KC   GS+ ++++VFD M   NV SWT ++ G+VQSG R  EA++LF  M Q   
Sbjct: 83  VDMYGKC---GSLVEAKRVFDAMQHKNVFSWTMLMAGFVQSG-RGVEAIQLFHRMCQEGE 138

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            P+       + +CG     +   ++++ A   G   D    N++I+MY + G + +A  
Sbjct: 139 LPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLVTANAIINMYGKCGSIGEAFA 198

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F  + EKN++S++TM+ A+ +N  +++A      ++  G+     T+ S+L   +S+GA
Sbjct: 199 VFTRMPEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGA 258

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           +  G+ +H RI+ +G +++  + N L++MY +C + + A  VF  M ++NV+SW +M+  
Sbjct: 259 LELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSPDDARDVFDSMVEKNVVSWNAMLAA 318

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           + ++G +  AL +F  M  +G++PN IT++ +L  CSH+G   +   HF  M  + GI  
Sbjct: 319 YGQNGRSREALALFDSMDLEGVRPNDITFVTILYCCSHSGKFKDAVSHFVEMRQDFGITP 378

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           R  H+ C++D+LGRSG L EA E I++MP+ AD ++W + L AC  H D +    AAE  
Sbjct: 379 REVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVLWTSLLCACVTHKDEDRAARAAEEA 438

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
            +++P+  AA+I+LSNLYA+   W+  A +RKRM++  + K+AG SWIE D +VH+F  G
Sbjct: 439 FQREPRCAAAYIMLSNLYAALKKWDEAAKVRKRMEQAGVRKQAGRSWIEIDKQVHEFVAG 498

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           ++ HP    I+  L +L  +++  GY PD   V+H +EEE+K + LF HSEK+AVAFG+ 
Sbjct: 499 DSIHPDKSRIFKTLQRLMSEMRIKGYEPDRKVVIHSMEEEEKDEVLFYHSEKLAVAFGIA 558

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ST    P+ + KNLRVC DCH+AIK+IS V GR I +RDSNRFHH   G+CSC DYW
Sbjct: 559 STPPRTPLCIVKNLRVCSDCHSAIKFISGVEGRRITVRDSNRFHHFDRGECSCGDYW 615



 Score =  196 bits (497), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 123/390 (31%), Positives = 198/390 (50%), Gaps = 16/390 (4%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            +DL+ Q G          L++ C  ++    G+ +H  +    L+    + N L+ +Y 
Sbjct: 28  AVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGRRIHRWMDSGTLDRPRFLSNLLVDMYG 87

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           KCG L EA ++F +M +K ++ SW+ +++ +V  G+ V+AI +F  M + G  P+     
Sbjct: 88  KCGSLVEAKRVFDAMQHK-NVFSWTMLMAGFVQSGRGVEAIQLFHRMCQEGELPDRVALL 146

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKM 243
             I +C   + ++ G  I+     CG  DSD+    A+I+M+ K GS+    A+ VF +M
Sbjct: 147 KFIDSCGAAKALSQGREIHSAAASCG-MDSDLVTANAIINMYGKCGSIG--EAFAVFTRM 203

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            EKN + W+ MI    Q     +A+  F  M   G   DR T   V+ A + +     GK
Sbjct: 204 PEKNVISWSTMIAAFCQNELADEALLFFKLMQQEGMELDRITYVSVLDAYTSVGALELGK 263

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            LH   +  GL   + VG +LV+MY KC   GS DD+R VFD M++ NV+SW A++  Y 
Sbjct: 264 ALHVRIVYAGLDTSIVVGNTLVNMYGKC---GSPDDARDVFDSMVEKNVVSWNAMLAAYG 320

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR----GR 419
           Q+ GR +EA+ LF  M    V PN  TF ++L  C +   S   +   +H V+     G 
Sbjct: 321 QN-GRSREALALFDSMDLEGVRPNDITFVTILYCCSH---SGKFKDAVSHFVEMRQDFGI 376

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESL 449
              +     LI M  RSG++E+A +  +++
Sbjct: 377 TPREVHFGCLIDMLGRSGKLEEAEELIQAM 406



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 129/431 (29%), Positives = 210/431 (48%), Gaps = 15/431 (3%)

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGH 200
           +R I  W   +S  +  G  VDAI   V++LE  G          +IR C+  + +  G 
Sbjct: 6   RRAITKW---LSPVLECGG-VDAIREAVDLLEQSGAAGGTGDLEQLIRRCAGAKALEEGR 61

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            I+ ++   G  D    +   L+DM+ K GS  L  A +VFD M  KN   WT+++    
Sbjct: 62  RIHRWM-DSGTLDRPRFLSNLLVDMYGKCGS--LVEAKRVFDAMQHKNVFSWTMLMAGFV 118

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q G   +AI+LF  M   G LPDR  L   + +C   +  + G+++HS A   G+  D+ 
Sbjct: 119 QSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDLV 178

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
              ++++MY KC   GS+ ++  VF RM + NV+SW+ +I  + Q+   D EA+  F  M
Sbjct: 179 TANAIINMYGKC---GSIGEAFAVFTRMPEKNVISWSTMIAAFCQNELAD-EALLFFKLM 234

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            Q  +  +  T+ SVL A  ++    + + ++   V  G      VGN+L++MY + G  
Sbjct: 235 QQEGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAGLDTSIVVGNTLVNMYGKCGSP 294

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           +DAR  F+S+ EKN+VS+N M+ AY +N  S +A  L   ++  GV  +  TF ++L   
Sbjct: 295 DDARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYCC 354

Query: 500 SSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVIS 557
           S  G           + +  G       +  LI M  R   +E A ++ + M    + + 
Sbjct: 355 SHSGKFKDAVSHFVEMRQDFGITPREVHFGCLIDMLGRSGKLEEAEELIQAMPVPADAVL 414

Query: 558 WTSMITGFAKH 568
           WTS++     H
Sbjct: 415 WTSLLCACVTH 425



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 153/315 (48%), Gaps = 14/315 (4%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +  GR  +AI     M Q+G  PD       + SC  ++    G+ +HS      ++ + 
Sbjct: 118 VQSGRGVEAIQLFHRMCQEGELPDRVALLKFIDSCGAAKALSQGREIHSAAASCGMDSDL 177

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           V  N++I++Y KCG + EA  +F  M  K +++SWS+MI+++       +A+  F  M +
Sbjct: 178 VTANAIINMYGKCGSIGEAFAVFTRMPEK-NVISWSTMIAAFCQNELADEALLFFKLMQQ 236

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G   +   + +V+ A ++   + +G  ++  ++  G  D+ + VG  L++M+ K GS D
Sbjct: 237 EGMELDRITYVSVLDAYTSVGALELGKALHVRIVYAG-LDTSIVVGNTLVNMYGKCGSPD 295

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
              A  VFD M EKN V W  M+    Q G  R+A+ LF  M L G  P+  T   ++  
Sbjct: 296 --DARDVFDSMVEKNVVSWNAMLAAYGQNGRSREALALFDSMDLEGVRPNDITFVTILYC 353

Query: 293 CSELELFTSGKQLHSWAIRTGLAL---DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-L 348
           CS    F      H   +R    +   +V  GC L+DM  +    G ++++ ++   M +
Sbjct: 354 CSHSGKFKDAVS-HFVEMRQDFGITPREVHFGC-LIDMLGR---SGKLEEAEELIQAMPV 408

Query: 349 DHNVMSWTAIITGYV 363
             + + WT+++   V
Sbjct: 409 PADAVLWTSLLCACV 423


>gi|147767942|emb|CAN73397.1| hypothetical protein VITISV_016435 [Vitis vinifera]
          Length = 929

 Score =  454 bits (1169), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 262/804 (32%), Positives = 417/804 (51%), Gaps = 99/804 (12%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++ I    LM  +G  PD   +  + K+C   +N+ +GK V+  +     E NS + 
Sbjct: 169 GDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVK 228

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            S++ ++ KCG ++ A + F+ +  K D+  W+ M+S Y ++G+   A+    +M   G 
Sbjct: 229 GSILDMFIKCGRMDIARRFFEEIEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGV 287

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P++  ++A+I                      GY  S                   E A
Sbjct: 288 KPDQVTWNAIIS---------------------GYAQSG----------------QFEEA 310

Query: 237 YKVFDKMT-----EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            K F +M      + N V WT +I    Q G   +A+ +F  M+L G  P+  T++  VS
Sbjct: 311 SKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEGVKPNSITIASAVS 370

Query: 292 ACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           AC+ L L   G+++H + I+   L  D+ VG SLVD YAKC    SV+ +R+ F  +   
Sbjct: 371 ACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAKCR---SVEVARRKFGMIKQT 427

Query: 351 NVMSWTAIITGYVQSG----------------------------------GRDKEAVKLF 376
           +++SW A++ GY   G                                  G  K A++ F
Sbjct: 428 DLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGLVTGFTQYGDGKAALEFF 487

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M    + PN  T +  L ACG + +  + ++++ + ++    L   VG++LISMY+  
Sbjct: 488 QRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGVGSALISMYSGC 547

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
             +E A   F  L  +++V +N+++ A A++  S  A +LL E+  + V  +  T  S L
Sbjct: 548 DSLEVACSVFSELSTRDVVVWNSIISACAQSGRSVNALDLLREMNLSNVEVNTVTMVSAL 607

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              S + A+ +G++IH  II+ G ++ + I N+LI MY RC +++ + ++F  M  R+++
Sbjct: 608 PACSKLAALRQGKEIHQFIIRCGLDTCNFILNSLIDMYGRCGSIQKSRRIFDLMPQRDLV 667

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW  MI+ +  HGF   A+ +F      G+KPN IT+  +LSACSH+GLI EGWK+F+ M
Sbjct: 668 SWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSACSHSGLIEEGWKYFKMM 727

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             E+ +   +E YACMVDLL R+G   E LEFI  MP   +  VW + LGACR+H + +L
Sbjct: 728 KTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKMPFEPNAAVWGSLLGACRIHCNPDL 787

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            ++AA  + E +PQ    ++L++N+Y++AG WE  A IR  MKER + K  GCSWIE   
Sbjct: 788 AEYAARYLFELEPQSSGNYVLMANIYSAAGRWEDAAKIRCLMKERGVTKPPGCSWIEVKR 847

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           K+H F VG+TSHP   +I  +  +L                  +++E++K   L  HSEK
Sbjct: 848 KLHSFVVGDTSHPLMEQISGKDGKL------------------DVDEDEKEFSLCGHSEK 889

Query: 797 IAVAFGLISTSKSKPIRVFKNLRV 820
           IA+AFGLIST+   P+R+ KNLRV
Sbjct: 890 IALAFGLISTTXGTPLRIIKNLRV 913



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 145/572 (25%), Positives = 254/572 (44%), Gaps = 91/572 (15%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + + G  +KA+  +  M   G  PD  T+                               
Sbjct: 266 YTSKGEFKKALKCISDMKLSGVKPDQVTW------------------------------- 294

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRD----IVSWSSMISSYVNRGKQVDAIHMF 168
               N++IS Y++ G   EA+K F  MG  +D    +VSW+++I+     G   +A+ +F
Sbjct: 295 ----NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVF 350

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
            +M+  G  PN    ++ + AC+N   +  G  I+G+ +K    DSD+ VG +L+D + K
Sbjct: 351 RKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYYAK 410

Query: 229 --------------GSVDL----------------ESAYKVFDKM----TEKNTVGWTLM 254
                            DL                E A ++  +M     E + + W  +
Sbjct: 411 CRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWNGL 470

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +T  TQ G  + A+  F  M   G  P+  T+SG ++AC ++     GK++H + +R  +
Sbjct: 471 VTGFTQYGDGKAALEFFQRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHI 530

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            L   VG +L+ MY+ C    S++ +  VF  +   +V+ W +II+   QS GR   A+ 
Sbjct: 531 ELSTGVGSALISMYSGCD---SLEVACSVFSELSTRDVVVWNSIISACAQS-GRSVNALD 586

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISM 432
           L  +M    V  N  T  S L AC  L      ++++   ++ G  LD C  + NSLI M
Sbjct: 587 LLREMNLSNVEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCG--LDTCNFILNSLIDM 644

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y R G ++ +R+ F+ + +++LVS+N M+  Y  +     A  L       G+  +  TF
Sbjct: 645 YGRCGSIQKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITF 704

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEM 550
            +LLS  S  G I +G + + +++K+ +  +  +  Y  ++ + SR        +  ++M
Sbjct: 705 TNLLSACSHSGLIEEGWK-YFKMMKTEYAMDPAVEQYACMVDLLSRAGQFNETLEFIEKM 763

Query: 551 E-DRNVISWTSMITGFAKH------GFAARAL 575
             + N   W S++     H       +AAR L
Sbjct: 764 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYL 795



 Score =  184 bits (467), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 223/443 (50%), Gaps = 51/443 (11%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVKGSVDLESAYKVF 240
           ++++++ C    N+ +G  ++  L+  G    DVC  +G  L++++ +    +E A ++F
Sbjct: 92  YASILQKCRKLYNLRLGFQVHAQLVVNGV---DVCEFLGSRLLEVYCQTGC-VEDARRMF 147

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           DKM+E+N   WT ++     LG   + I+LF  M+  G  PD F    V  ACSEL+ + 
Sbjct: 148 DKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPKVFKACSELKNYR 207

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            GK ++ + +  G   + CV  S++DM+ KC   G +D +R+ F+ +   +V  W  +++
Sbjct: 208 VGKDVYDYMLSIGFEGNSCVKGSILDMFIKC---GRMDIARRFFEEIEFKDVFMWNIMVS 264

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY  S G  K+A+K  SDM    V P+  T+                             
Sbjct: 265 GYT-SKGEFKKALKCISDMKLSGVKPDQVTW----------------------------- 294

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFE 475
                 N++IS YA+SG+ E+A K F  +     F+ N+VS+  ++    +N    +A  
Sbjct: 295 ------NAIISGYAQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALS 348

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMY 534
           +  ++   GV  ++ T AS +S  +++  +  G +IH   IK    +S+  + N+L+  Y
Sbjct: 349 VFRKMVLEGVKPNSITIASAVSACTNLSLLRHGREIHGYCIKVEELDSDLLVGNSLVDYY 408

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C +VE A + F  ++  +++SW +M+ G+A  G    A+E+  +M   GI+P+ IT+ 
Sbjct: 409 AKCRSVEVARRKFGMIKQTDLVSWNAMLAGYALRGSHEEAIELLSEMKFQGIEPDIITWN 468

Query: 595 AVLSACSHAGLISEGWKHFRSMY 617
            +++  +  G      + F+ M+
Sbjct: 469 GLVTGFTQYGDGKAALEFFQRMH 491



 Score =  126 bits (317), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 144/296 (48%)

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G V   G    A  L S M           +AS+L+ C  L +  +  QV+   V  G  
Sbjct: 62  GSVHRNGVLNNAAMLLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVD 121

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           + + +G+ L+ +Y ++G +EDAR+ F+ + E+N+ S+  +++ Y    + E+  +L + +
Sbjct: 122 VCEFLGSRLLEVYCQTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLM 181

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
            + GV    + F  +    S +     G+ ++  ++  GFE N C+  +++ M+ +C  +
Sbjct: 182 VNEGVRPDHFVFPKVFKACSELKNYRVGKDVYDYMLSIGFEGNSCVKGSILDMFIKCGRM 241

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A + F+E+E ++V  W  M++G+   G   +AL+    M   G+KP+ +T+ A++S  
Sbjct: 242 DIARRFFEEIEFKDVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGY 301

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           + +G   E  K+F  M         +  +  ++    ++G   EAL   R M L  
Sbjct: 302 AQSGQFEEASKYFLEMGGLKDFKPNVVSWTALIAGSEQNGYDFEALSVFRKMVLEG 357



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/361 (27%), Positives = 174/361 (48%), Gaps = 29/361 (8%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DG+     F    M   G  P+  T S  L +C + RN  LGK +H  + R+ +E ++ +
Sbjct: 479 DGKAALEFF--QRMHSMGMDPNTTTISGALAACGQVRNLKLGKEIHGYVLRNHIELSTGV 536

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++LIS+YS C  L  A  +F  + + RD+V W+S+IS+    G+ V+A+ +  EM    
Sbjct: 537 GSALISMYSGCDSLEVACSVFSEL-STRDVVVWNSIISACAQSGRSVNALDLLREMNLSN 595

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVK-GSVD 232
              N     + + ACS    +  G  I+ F+++CG    D C  +  +LIDM+ + GS+ 
Sbjct: 596 VEVNTVTMVSALPACSKLAALRQGKEIHQFIIRCGL---DTCNFILNSLIDMYGRCGSI- 651

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            + + ++FD M +++ V W +MI+     G   DA+ LF      G  P+  T + ++SA
Sbjct: 652 -QKSRRIFDLMPQRDLVSWNVMISVYGMHGFGMDAVNLFQXFRTMGLKPNHITFTNLLSA 710

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM 347
           CS   L   G +     ++T  A+D       V+ YA C VD     G  +++ +  ++M
Sbjct: 711 CSHSGLIEEGWKYFK-MMKTEYAMD-----PAVEQYA-CMVDLLSRAGQFNETLEFIEKM 763

Query: 348 -LDHNVMSWTAIITG---YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
             + N   W +++     +      +  A  LF   ++ Q + N+   A++  A G   D
Sbjct: 764 PFEPNAAVWGSLLGACRIHCNPDLAEYAARYLFE--LEPQSSGNYVLMANIYSAAGRWED 821

Query: 404 S 404
           +
Sbjct: 822 A 822



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/261 (22%), Positives = 117/261 (44%), Gaps = 11/261 (4%)

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           LL  ++ T        +AS+L     +  +  G Q+HA+++ +G +    + + L+ +Y 
Sbjct: 76  LLSSMDLTNPDECIEIYASILQKCRKLYNLRLGFQVHAQLVVNGVDVCEFLGSRLLEVYC 135

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +   VE A ++F +M +RNV SWT+++  +   G     +++FY M+ +G++P+   +  
Sbjct: 136 QTGCVEDARRMFDKMSERNVFSWTAIMEMYCGLGDYEETIKLFYLMVNEGVRPDHFVFPK 195

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC----MVDLLGRSGSLTEALEFIRS 651
           V  ACS      + ++  + +YD + +    E  +C    ++D+  + G +  A  F   
Sbjct: 196 VFKACSEL----KNYRVGKDVYD-YMLSIGFEGNSCVKGSILDMFIKCGRMDIARRFFEE 250

Query: 652 MPLSADVLVWRTFLGACRVHGDTELG-KHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           +    DV +W   +      G+ +   K  ++M L     D      + + YA +G +E 
Sbjct: 251 IEFK-DVFMWNIMVSGYTSKGEFKKALKCISDMKLSGVKPDQVTWNAIISGYAQSGQFEE 309

Query: 711 VANIRKRMKERNLIKEAGCSW 731
            +     M      K    SW
Sbjct: 310 ASKYFLEMGGLKDFKPNVVSW 330


>gi|357151953|ref|XP_003575959.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14850-like [Brachypodium distachyon]
          Length = 689

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 239/619 (38%), Positives = 362/619 (58%), Gaps = 8/619 (1%)

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV--VSACSELELFTSGKQ 304
             V +T  I+   Q   P  A+  F  M+  G  P+ FT       +AC+     T G Q
Sbjct: 75  TVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQ 134

Query: 305 LHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           +H+ A+R G L  D  V C+ +DMY K    G +  +R++F+ M + NV++W A++T  V
Sbjct: 135 IHALALRFGYLPGDPFVSCAAMDMYFK---TGCLGLARRLFEEMPNRNVIAWNAVMTNAV 191

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
             G R  E  K +  + +    PN  +  +   AC   +  ++ EQ +   V  G  +D 
Sbjct: 192 IDG-RPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDV 250

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N+++  Y +      AR  F+ +  +N VS+ +M+ AYA++   E A  +     +T
Sbjct: 251 SVSNAMVDFYGKCRCAGKARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNT 310

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           G   + +  +S+L+  + +  +  G  +HA  ++S  ++N  + +AL+ MY +C  VE A
Sbjct: 311 GEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVEDA 370

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML-ADGIKPNGITYIAVLSACSH 602
            QVF +M +RN+++W +MI G+A  G A  AL +F  M+ + G  PN IT + V++ACS 
Sbjct: 371 EQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACSR 430

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
            GL  +G++ F +M +  G+  R EHYAC+VDLLGR+G    A E I+ MP+   + VW 
Sbjct: 431 GGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISVWG 490

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             LGAC++HG TELG+ A+E + E DPQD   H+LLSN+ ASAG W    ++RK MK   
Sbjct: 491 ALLGACKMHGKTELGRIASEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVG 550

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           + KE GCSWI   N VH F+  +T H +  EI A L +L  +++  GY+PDT + L+++E
Sbjct: 551 IKKEPGCSWITWKNVVHVFYAKDTKHDRNSEIQALLAKLKKQMQASGYMPDTQYSLYDVE 610

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE+K   +FQHSEK+A+AFGLI    S PIR+ KNLR+C DCH A K++S + GREI++R
Sbjct: 611 EEEKETEVFQHSEKLALAFGLIHIPPSVPIRITKNLRICVDCHRAFKFVSGIVGREIIVR 670

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+NRFH+ K  +CSC DYW
Sbjct: 671 DNNRFHYFKQFECSCKDYW 689



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/492 (26%), Positives = 231/492 (46%), Gaps = 14/492 (2%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPN--SVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            ++ I SR+  LG+  H+   R  L P     I   L++LYSK      A     S  N 
Sbjct: 16  FEAAISSRSPRLGRAAHARALR-LLSPGLPPFICAHLVNLYSKLDLPAAAASALASDPNP 74

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR--ACSNTENVAIGH 200
             +VS+++ IS      + + A+  F  ML +G  PN++ F +  +  AC+      +G 
Sbjct: 75  -TVVSFTAFISGAAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGP 133

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            I+   L+ GY   D  V CA +DM+ K    L  A ++F++M  +N + W  ++T    
Sbjct: 134 QIHALALRFGYLPGDPFVSCAAMDMYFKTGC-LGLARRLFEEMPNRNVIAWNAVMTNAVI 192

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G P +  + +  +  +G +P+  ++    +AC+     + G+Q H + +  G  +DV V
Sbjct: 193 DGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSV 252

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             ++VD Y KC   G    +R VFD M   N +SW ++I  Y Q G  +++A+ ++    
Sbjct: 253 SNAMVDFYGKCRCAGK---ARAVFDGMRVRNSVSWCSMIVAYAQHGA-EEDALAVYMGAR 308

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
                P  F  +SVL  C  LL  N    ++  AV+     +  V ++L+ MY + G +E
Sbjct: 309 NTGEEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKCGGVE 368

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGA 499
           DA + F  + E+NLV++N M+  YA   +++ A  +    I   G   +  T  ++++  
Sbjct: 369 DAEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITAC 428

Query: 500 SSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS- 557
           S  G    G ++   + +  G E     Y  ++ +  R    E A+++ + M  R  IS 
Sbjct: 429 SRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAGMEERAYEIIQRMPMRPSISV 488

Query: 558 WTSMITGFAKHG 569
           W +++     HG
Sbjct: 489 WGALLGACKMHG 500



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 244/530 (46%), Gaps = 73/530 (13%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKS--CIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           R   A+     M + G  P+  T+    K+  C   R   +G  +H+L  R    P    
Sbjct: 91  RPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVGPQIHALALRFGYLPGDPF 150

Query: 116 LN-SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++ + + +Y K G L  A ++F+ M N R++++W++++++ V  G+ ++    +  + E 
Sbjct: 151 VSCAAMDMYFKTGCLGLARRLFEEMPN-RNVIAWNAVMTNAVIDGRPLETFKAYFGLREA 209

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN     A   AC+    +++G   +GF++ CG FD DV V  A++D + K      
Sbjct: 210 GGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCG-FDMDVSVSNAMVDFYGKCRC-AG 267

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  VFD M  +N+V W  MI    Q G   DA+ +++    +G  P  F +S V++ C+
Sbjct: 268 KARAVFDGMRVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTGEEPTDFMVSSVLTTCA 327

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L     G+ LH+ A+R+ +  ++ V  +LVDMY KC   G V+D+ +VF  M + N+++
Sbjct: 328 GLLGLNFGRALHAVAVRSCIDANIFVASALVDMYGKC---GGVEDAEQVFLDMPERNLVT 384

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           W A+I GY   G   + A+ +F  MI+ G  +PNH T  +V+ AC               
Sbjct: 385 WNAMIGGYAHIGD-AQNALAVFDAMIRSGGTSPNHITLVNVITAC--------------- 428

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNL 468
                               +R G  +D  + F+++ E+  V      Y  +VD   +  
Sbjct: 429 --------------------SRGGLTKDGYELFDTMRERFGVEPRTEHYACVVDLLGRAG 468

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLS-----GASSIGAIGKGEQIHARIIKSGFESN 523
             E+A+E++  +    +  S   + +LL      G + +G I   +        SG   N
Sbjct: 469 MEERAYEIIQRMP---MRPSISVWGALLGACKMHGKTELGRIASEKLFELDPQDSG---N 522

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNV--------ISWTSMITGF 565
           H + + +++   R A    A  V KEM++  +        I+W +++  F
Sbjct: 523 HVLLSNMLASAGRWAE---ATDVRKEMKNVGIKKEPGCSWITWKNVVHVF 569



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 90/373 (24%), Positives = 171/373 (45%), Gaps = 23/373 (6%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DGR  +       + + G  P++ +      +C  +    LG+  H  +     + +  +
Sbjct: 193 DGRPLETFKAYFGLREAGGMPNVVSVCAFFNACAGAMFLSLGEQFHGFVVTCGFDMDVSV 252

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+++  Y KC    +A  +F  M   R+ VSW SMI +Y   G + DA+ +++     G
Sbjct: 253 SNAMVDFYGKCRCAGKARAVFDGM-RVRNSVSWCSMIVAYAQHGAEEDALAVYMGARNTG 311

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P ++  S+V+  C+    +  G  ++   ++    D+++ V  AL+DM+ K    +E 
Sbjct: 312 EEPTDFMVSSVLTTCAGLLGLNFGRALHAVAVR-SCIDANIFVASALVDMYGKCG-GVED 369

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACS 294
           A +VF  M E+N V W  MI     +G  ++A+ +F  MI SG   P+  TL  V++ACS
Sbjct: 370 AEQVFLDMPERNLVTWNAMIGGYAHIGDAQNALAVFDAMIRSGGTSPNHITLVNVITACS 429

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM-L 348
              L   G +L    +R    ++        + YA C VD     G  + + ++  RM +
Sbjct: 430 RGGLTKDGYELFD-TMRERFGVE-----PRTEHYA-CVVDLLGRAGMEERAYEIIQRMPM 482

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAV---KLFSDMIQGQVAPNHFTFASVLKACGNLLD-S 404
             ++  W A++      G  +   +   KLF   +  Q + NH   +++L + G   + +
Sbjct: 483 RPSISVWGALLGACKMHGKTELGRIASEKLFE--LDPQDSGNHVLLSNMLASAGRWAEAT 540

Query: 405 NVAEQVYTHAVKR 417
           +V +++    +K+
Sbjct: 541 DVRKEMKNVGIKK 553



 Score = 44.7 bits (104), Expect = 0.23,   Method: Compositional matrix adjust.
 Identities = 41/171 (23%), Positives = 74/171 (43%), Gaps = 10/171 (5%)

Query: 508 GEQIHAR---IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           G   HAR   ++  G     C +  L+++YS+     AA        +  V+S+T+ I+G
Sbjct: 28  GRAAHARALRLLSPGLPPFICAH--LVNLYSKLDLPAAAASALASDPNPTVVSFTAFISG 85

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVL--SACSHAGLISEGWKHFRSMYDEHGI 622
            A+H     AL  F  ML  G++PN  T+ +    +AC+     + G     ++    G 
Sbjct: 86  AAQHARPLAALSAFAAMLRVGLRPNDFTFPSAFKAAACAPPRCSTVG-PQIHALALRFGY 144

Query: 623 VQRMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           +      +C  +D+  ++G L  A      MP + +V+ W   +    + G
Sbjct: 145 LPGDPFVSCAAMDMYFKTGCLGLARRLFEEMP-NRNVIAWNAVMTNAVIDG 194


>gi|125534384|gb|EAY80932.1| hypothetical protein OsI_36110 [Oryza sativa Indica Group]
          Length = 770

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 242/707 (34%), Positives = 402/707 (56%), Gaps = 26/707 (3%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML  G       +  ++  C    ++     ++G + K G   +D+ V  +L++ +++  
Sbjct: 69  MLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGA-GADMFVATSLVNAYMRCG 127

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                A ++FD M E+N V WT ++T  T    P   + +F++M+  G  P  +TL   +
Sbjct: 128 A-ARDARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATL 186

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +AC        GKQ+H +AI+ G      +G SL  +YAK    GS+D + + F R+ + 
Sbjct: 187 NACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL---GSLDSALRAFWRIPEK 243

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKL----FSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           NV++WT +I+   +    D+E V+L    F DM+   V PN FT  SV+  CG  LD N+
Sbjct: 244 NVITWTTMISACAE----DEECVELGLSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNL 299

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            +QV   + K G   +  V NS + +Y R G  ++A + FE + + +++++N M+  YA+
Sbjct: 300 GKQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQ 359

Query: 467 NLNSEK-----------AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            ++S K           A  +  +++ + +    +TF+S+LS  S++ A+ +GEQIHA+ 
Sbjct: 360 IMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQT 419

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           IKSGF S+  + +AL++MY++C  ++ A + F EM  R  ++WTSMI+G+++HG    A+
Sbjct: 420 IKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAI 479

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
           ++F +M   G++PN IT++++LSACS+AGL+ E   +F  M  E+ I   ++HY CM+D+
Sbjct: 480 QLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDM 539

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
             R G + +A  FI+      +  +W + +  CR HG+ EL  +AA+ +LE  P+    +
Sbjct: 540 FVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETY 599

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           ILL N+Y S   W+ VA +RK MK+ ++      SWI   +KV+ F   + +HP+  E+Y
Sbjct: 600 ILLLNMYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELY 659

Query: 756 AELDQLALKIKEFGYLPDTNFVLHELEEEQK--VQYLFQHSEKIAVAFGLISTSKSKPIR 813
             L+ L  K K  GY P  N  L + E+++K     L  HSE++AVA GL+ T     +R
Sbjct: 660 QLLENLLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVR 719

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           V KN+ +C DCH++IK  S++  REI++RDS R H  KDG+CSC D+
Sbjct: 720 VTKNITMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 766



 Score =  261 bits (668), Expect = 8e-67,   Method: Compositional matrix adjust.
 Identities = 162/567 (28%), Positives = 296/567 (52%), Gaps = 39/567 (6%)

Query: 57  GRVQKAIFTLDL-----MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           G ++  + TLD+     M  +G       Y  LL  C+   +    + VH  + ++    
Sbjct: 52  GGMEAPLRTLDVQEAMTMLTEGKAVQSAMYVPLLHRCVEMGSLGAARAVHGHMAKTGAGA 111

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +  SL++ Y +CG   +A ++F  M  +R++V+W+++++ Y    +    + +FVEM
Sbjct: 112 DMFVATSLVNAYMRCGAARDARRLFDGM-PERNVVTWTALVTGYTLNSQPALGLEVFVEM 170

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
           LE+G  P+ Y   A + AC  + +V +G  ++G+ +K G  +S   +G +L  ++ K GS
Sbjct: 171 LEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGA-ESITSMGNSLCSLYAKLGS 229

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQ-LGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +D  SA + F ++ EKN + WT MI+ C +   C    + LF+DM++ G +P+ FTL+ V
Sbjct: 230 LD--SALRAFWRIPEKNVITWTTMISACAEDEECVELGLSLFIDMLMDGVMPNEFTLTSV 287

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +S C        GKQ+ +++ + G   ++ V  S + +Y +    G  D++ ++F++M D
Sbjct: 288 MSLCGTRLDLNLGKQVQAFSFKIGCETNLPVKNSTMYLYLR---KGETDEAMRLFEQMED 344

Query: 350 HNVMSWTAIITGY----------VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            ++++W A+I+GY          +Q+  R  +A+ +F D+ +  + P+ FTF+S+L  C 
Sbjct: 345 ASIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCS 404

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            ++     EQ++   +K G   D  V ++L++MY + G ++DA KAF  +  +  V++ +
Sbjct: 405 AMMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTS 464

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           M+  Y+++   ++A +L  E+   GV  +  TF SLLS  S  G + + E     + K  
Sbjct: 465 MISGYSQHGQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK-- 522

Query: 520 FESNHCI------YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAA 572
               +CI      Y  +I M+ R   VE AF   K    + N   W+S++ G   HG   
Sbjct: 523 ---EYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNME 579

Query: 573 RALEIFYKMLADGIKPNGI-TYIAVLS 598
            A     K+L   +KP GI TYI +L+
Sbjct: 580 LAFYAADKLLE--LKPKGIETYILLLN 604


>gi|449453744|ref|XP_004144616.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
 gi|449511814|ref|XP_004164061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 681

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 231/631 (36%), Positives = 374/631 (59%), Gaps = 14/631 (2%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L+ A+ +FD + E   V W L+I    +     DAI LF  + L  F+PD FTL  V+ 
Sbjct: 64  NLQYAHSLFDWIQEPTLVSWNLLIKCYIENQRSNDAIALFCKL-LCDFVPDSFTLPCVLK 122

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            C+ L     GKQ+H   ++ G  +D  V  SLV MY+KC   G ++  RKVFDRM D +
Sbjct: 123 GCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKC---GEIELCRKVFDRMEDKD 179

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SW ++I GY + G      ++L  +M +     + F++  ++           A  V+
Sbjct: 180 VVSWNSLIDGYARCG-----EIELALEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVF 234

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
                R    +    N++I+ Y ++G    A++ F+ + E++LV++N+M+  Y +N    
Sbjct: 235 DRMPIR----NSVSWNAMINGYMKAGDSNTAKELFDQMPERSLVTWNSMITGYERNKQFT 290

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           KA +L   +    +  +  T    +S AS + ++G G  +H+ I+KSGF+++  +   LI
Sbjct: 291 KALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLI 350

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MYS+C +V++A +VF+ +  + +  WTS+I G   HG   + LE+F +M   G+KP+ I
Sbjct: 351 EMYSKCGSVKSALRVFRSIPKKKLGHWTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAI 410

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+I VL+ACSHAG   +  ++F+ M  ++GI   +EHY C++D+L R+G L EA + I  
Sbjct: 411 TFIGVLNACSHAGFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKDTIER 470

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+ A+ ++W + L   R HG+  +G++AA+ +++  P     +++LSN+YA+AG WE V
Sbjct: 471 MPIKANKVIWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGLWEKV 530

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
             +R+ MK++ + K+ GCS IE    +H+F VG+ SHP+T EIY +L ++  K+   G++
Sbjct: 531 RQVREMMKKKGMKKDPGCSSIEHQGSIHEFIVGDKSHPQTEEIYIKLCEMKKKLNVAGHI 590

Query: 772 PDTNFVLHELEEE-QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           PDT  VL  LEE+ +K   L  HSE++A+AFGL++     PIR+ KNLR+C DCH   K 
Sbjct: 591 PDTTQVLLCLEEDNEKEAELETHSERLAIAFGLLNIKHGSPIRIIKNLRICNDCHAVTKL 650

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +S +  REI++RD +RFHH K G CSC D+W
Sbjct: 651 LSHIYNREIIIRDGSRFHHFKSGSCSCKDFW 681



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 142/608 (23%), Positives = 281/608 (46%), Gaps = 47/608 (7%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYS--KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           +H+L  ++    +  + + L++LY+  +  +L  A+ +F  +  +  +VSW+ +I  Y+ 
Sbjct: 34  LHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWI-QEPTLVSWNLLIKCYIE 92

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
             +  DAI +F ++L   F P+ +    V++ C+    +  G  I+G +LK G F  D  
Sbjct: 93  NQRSNDAIALFCKLL-CDFVPDSFTLPCVLKGCARLGALQEGKQIHGLVLKIG-FGVDKF 150

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V  +L+ M+ K   ++E   KVFD+M +K+ V W  +I    + G     I L L+M   
Sbjct: 151 VLSSLVSMYSKCG-EIELCRKVFDRMEDKDVVSWNSLIDGYARCG----EIELALEMFEE 205

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHS-WAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
               D F+ + ++   S+     + + +     IR  ++ +     ++++ Y K    G 
Sbjct: 206 MPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRNSVSWN-----AMINGYMKA---GD 257

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
            + ++++FD+M + ++++W ++ITGY +   +  +A+KLF  M++  ++PN+ T    + 
Sbjct: 258 SNTAKELFDQMPERSLVTWNSMITGY-ERNKQFTKALKLFEVMLREDISPNYTTILGAVS 316

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           A   ++       V+++ VK G   D  +G  LI MY++ G ++ A + F S+ +K L  
Sbjct: 317 AASGMVSLGTGRWVHSYIVKSGFKTDGVLGTLLIEMYSKCGSVKSALRVFRSIPKKKLGH 376

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI- 515
           + +++     +   E+  EL  E+  TG+   A TF  +L+  S  G      +    + 
Sbjct: 377 WTSVIVGLGMHGLVEQTLELFDEMCRTGLKPHAITFIGVLNACSHAGFAEDAHRYFKMMT 436

Query: 516 ----IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGF 570
               IK   E     Y  LI +  R  ++E A    + M  + N + WTS+++G  KHG 
Sbjct: 437 YDYGIKPSIEH----YGCLIDVLCRAGHLEEAKDTIERMPIKANKVIWTSLLSGSRKHG- 491

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             R  E   + L D        Y+ + +  + AGL    W+  R + +        +   
Sbjct: 492 NIRMGEYAAQHLIDLAPDTTGCYVILSNMYAAAGL----WEKVRQVREMMKKKGMKKDPG 547

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE-----MIL 685
           C    +   GS+ E +   +S P + ++     ++  C +     +  H  +     + L
Sbjct: 548 C--SSIEHQGSIHEFIVGDKSHPQTEEI-----YIKLCEMKKKLNVAGHIPDTTQVLLCL 600

Query: 686 EQDPQDPA 693
           E+D +  A
Sbjct: 601 EEDNEKEA 608



 Score =  156 bits (394), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 127/476 (26%), Positives = 221/476 (46%), Gaps = 59/476 (12%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T   +LK C R      GK +H L+ +     +  +L+SL+S+YSKCG++    K+
Sbjct: 112 PDSFTLPCVLKGCARLGALQEGKQIHGLVLKIGFGVDKFVLSSLVSMYSKCGEIELCRKV 171

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M +K D+VSW+S+I  Y   G+   A+ MF EM E     + + ++ +I   S +  
Sbjct: 172 FDRMEDK-DVVSWNSLIDGYARCGEIELALEMFEEMPE----KDSFSWTILIDGLSKSGK 226

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +     ++  +        +     A+I+ ++K   D  +A ++FD+M E++ V W  MI
Sbjct: 227 LEAARDVFDRMPIRNSVSWN-----AMINGYMKAG-DSNTAKELFDQMPERSLVTWNSMI 280

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           T   +      A++LF  M+     P+  T+ G VSA S +    +G+ +HS+ +++G  
Sbjct: 281 TGYERNKQFTKALKLFEVMLREDISPNYTTILGAVSAASGMVSLGTGRWVHSYIVKSGFK 340

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D  +G  L++MY+KC   GSV  + +VF  +    +  WT++I G +   G  ++ ++L
Sbjct: 341 TDGVLGTLLIEMYSKC---GSVKSALRVFRSIPKKKLGHWTSVIVG-LGMHGLVEQTLEL 396

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F +M +  + P+  TF  VL AC             +HA                     
Sbjct: 397 FDEMCRTGLKPHAITFIGVLNAC-------------SHA--------------------- 422

Query: 436 SGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            G  EDA + F+ +      + ++  Y  ++D   +  + E+A +    IE   +  +  
Sbjct: 423 -GFAEDAHRYFKMMTYDYGIKPSIEHYGCLIDVLCRAGHLEEAKD---TIERMPIKANKV 478

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + SLLSG+   G I  GE     +I    ++  C Y  L +MY+     E   QV
Sbjct: 479 IWTSLLSGSRKHGNIRMGEYAAQHLIDLAPDTTGC-YVILSNMYAAAGLWEKVRQV 533



 Score = 62.0 bits (149), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 51/222 (22%), Positives = 102/222 (45%), Gaps = 8/222 (3%)

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYS--RCANVEAAFQVFKEMEDRNVISWTS 560
           G   +  Q+HA  IK+   ++  + + L+++Y+  R  N++ A  +F  +++  ++SW  
Sbjct: 26  GTEREANQLHALSIKTASLNHPSVSSRLLALYADPRINNLQYAHSLFDWIQEPTLVSWNL 85

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I  + ++  +  A+ +F K+L D + P+  T   VL  C+  G + EG K    +  + 
Sbjct: 86  LIKCYIENQRSNDAIALFCKLLCDFV-PDSFTLPCVLKGCARLGALQEG-KQIHGLVLKI 143

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           G        + +V +  + G +    +    M    DV+ W + +      G+ EL   A
Sbjct: 144 GFGVDKFVLSSLVSMYSKCGEIELCRKVFDRME-DKDVVSWNSLIDGYARCGEIEL---A 199

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
            EM  E   +D  +  +L +  + +G  E   ++  RM  RN
Sbjct: 200 LEMFEEMPEKDSFSWTILIDGLSKSGKLEAARDVFDRMPIRN 241


>gi|302776474|ref|XP_002971398.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
 gi|300160530|gb|EFJ27147.1| hypothetical protein SELMODRAFT_95698 [Selaginella moellendorffii]
          Length = 562

 Score =  454 bits (1168), Expect = e-125,   Method: Compositional matrix adjust.
 Identities = 229/563 (40%), Positives = 343/563 (60%), Gaps = 7/563 (1%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+++HS     G          LV MYAKC   G +D++R +F+ +L+  V+SW+A+I  
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKC---GCLDEARAIFNGILERTVVSWSAMIGA 60

Query: 362 YVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG-- 418
           Y   G R +EA+ LF  M   G+V PN  TF  V  ACG + D     +++  A+  G  
Sbjct: 61  YALHG-RGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGEL 119

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
           ++ +  + N+L++MY R G +E+ARK F+++   +  S+ +M+ A  +N    +A EL H
Sbjct: 120 KSSNAILENALLNMYVRCGSLEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFH 179

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
            +   G+  ++ T AS+L+  +  GA+  G+QIH+R+  SGF S+     AL+ MY++C 
Sbjct: 180 RMNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCG 239

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           ++E + +VF  ME RN +SWT+MI   A+HG    ALE+F +M  +G+  +  T+I VL 
Sbjct: 240 SLECSSKVFTAMETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLR 299

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSHAGLI E  + F SM +++ I     HY   +D +GR+G L +A E I SMP   + 
Sbjct: 300 ACSHAGLIKESLEFFHSMVEDYAIAPTETHYCRALDTIGRAGRLQDAEELIHSMPFHPET 359

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
           L W+T L ACR+H   E     AE++ +  P+D  A+ LL N+YA+ G +     +RK M
Sbjct: 360 LTWKTLLNACRIHSQAERATKVAELLSKLAPEDSMAYTLLGNVYAATGRYGDQMRVRKGM 419

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
            +R L K  G S+IE  NKVH+F  G+ +HP   EI  EL++L  +++E GY+P+T  VL
Sbjct: 420 TDRGLKKVPGKSFIEVKNKVHEFVAGDRAHPSRDEILLELEKLGGRMREAGYVPNTKDVL 479

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H + EE+K Q +  HSEK+A+AFGLI+T    P+ + KNLRVC DCH A K I+ +  R 
Sbjct: 480 HAVNEEEKEQLIGLHSEKLAIAFGLIATPPGTPLLIVKNLRVCSDCHAATKVIAKIMRRR 539

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           IV+RD++RFHH +DG+CSC DYW
Sbjct: 540 IVVRDTHRFHHFEDGQCSCKDYW 562



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 134/395 (33%), Positives = 204/395 (51%), Gaps = 38/395 (9%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ +HS L+       ++  N L+S+Y+KCG L+EA  IF  +  +R +VSWS+MI +Y 
Sbjct: 4   GRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGI-LERTVVSWSAMIGAYA 62

Query: 157 NRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-DS 214
             G+  +A+ +F  M   G   PN   F+ V  AC   E++  G  I+   +  G    S
Sbjct: 63  LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122

Query: 215 DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +  +  AL++M+V+ GS  LE A KVFD M   +   WT MIT CT+     +A+ LF  
Sbjct: 123 NAILENALLNMYVRCGS--LEEARKVFDTMDHPDAFSWTSMITACTENCELLEALELFHR 180

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M L G  P   TL+ V++AC+       GKQ+HS    +G    V    +L+DMYAKC  
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKC-- 238

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFA 392
            GS++ S KVF  M   N +SWTA+I    Q G  D EA++LF +M ++G VA +  TF 
Sbjct: 239 -GSLECSSKVFTAMETRNSVSWTAMIAALAQHGQGD-EALELFKEMNLEGMVA-DATTFI 295

Query: 393 SVLKACGN-------------LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            VL+AC +             +++        TH     RALD            R+GR+
Sbjct: 296 CVLRACSHAGLIKESLEFFHSMVEDYAIAPTETHYC---RALD---------TIGRAGRL 343

Query: 440 EDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKA 473
           +DA +   S+ F    +++ T+++A   +  +E+A
Sbjct: 344 QDAEELIHSMPFHPETLTWKTLLNACRIHSQAERA 378



 Score = 84.7 bits (208), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/164 (29%), Positives = 85/164 (51%), Gaps = 3/164 (1%)

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G +IH+R+   GF       N L+SMY++C  ++ A  +F  + +R V+SW++MI  +A
Sbjct: 3   EGRRIHSRLSLCGFHRATIAQNGLVSMYAKCGCLDEARAIFNGILERTVVSWSAMIGAYA 62

Query: 567 KHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQ 624
            HG    AL +F++M  DG ++PN +T+  V +AC     + +G + H  +M        
Sbjct: 63  LHGRGQEALLLFHRMRNDGRVEPNAMTFTGVFNACGVIEDLEQGREIHALAMASGELKSS 122

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
                  ++++  R GSL EA +   +M    D   W + + AC
Sbjct: 123 NAILENALLNMYVRCGSLEEARKVFDTMD-HPDAFSWTSMITAC 165



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/124 (32%), Positives = 68/124 (54%), Gaps = 1/124 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P   T + +L +C  S    +GK +HS L  S    + +   +L+ +Y+KCG 
Sbjct: 181 MNLEGIPPTSVTLASVLNACACSGALKVGKQIHSRLDASGFHSSVLAQTALLDMYAKCGS 240

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  ++K+F +M   R+ VSW++MI++    G+  +A+ +F EM   G   +   F  V+R
Sbjct: 241 LECSSKVFTAM-ETRNSVSWTAMIAALAQHGQGDEALELFKEMNLEGMVADATTFICVLR 299

Query: 189 ACSN 192
           ACS+
Sbjct: 300 ACSH 303


>gi|125597850|gb|EAZ37630.1| hypothetical protein OsJ_21964 [Oryza sativa Japonica Group]
          Length = 583

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/572 (38%), Positives = 349/572 (61%), Gaps = 5/572 (0%)

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC E      G+Q+H+  I       V +G  LV MY +C   G++DD+R V DRM +
Sbjct: 17  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRC---GALDDARNVLDRMPE 73

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT +I+GY Q+  R  EA+ LF  M++    PN +T A+VL +C         +Q
Sbjct: 74  RSVVSWTTMISGYSQTE-RHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 132

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V++  VK        VG+SL+ MYA+S  +++AR+ F++L E+++VS   ++  YA+   
Sbjct: 133 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 192

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E+A +L  ++   G+  +  TF +L++  S + ++  G+Q+HA I++        + N+
Sbjct: 193 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 252

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MYS+C  +  + +VF  M +R+V+SW +M+ G+ +HG     + +F K L   +KP+
Sbjct: 253 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPD 311

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T +AVLS CSH GL+ EG   F ++  E   +    HY C++DLLGRSG L +AL  I
Sbjct: 312 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 371

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            +MP  +   +W + LGACRVH +  +G+  A+ +LE +P++   +++LSN+YA+AG W+
Sbjct: 372 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 431

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V  +RK M E+ + KE G SWI  D  +H FH  E  HP   +I A++ ++ + IK  G
Sbjct: 432 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG 491

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++PD + VLH++++EQK + L  HSEK+A+ FGL++T     IRV KNLR+C DCH   K
Sbjct: 492 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAK 551

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++S V  REI LRD NRFH +  G C+C DYW
Sbjct: 552 FVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 583



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/400 (31%), Positives = 215/400 (53%), Gaps = 16/400 (4%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G       Y   + +CI  R    G+ VH+ +  ++  P   +   L+++Y +CG 
Sbjct: 1   MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L++A  +   M  +R +VSW++MIS Y    + V+A+ +F++ML  G  PNEY  + V+ 
Sbjct: 61  LDDARNVLDRM-PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 119

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           +CS  +++  G  ++  L+K   F+S + VG +L+DM+ K S +++ A +VFD + E++ 
Sbjct: 120 SCSGPQSIYQGKQVHSLLVKTN-FESHMFVGSSLLDMYAK-SENIQEARRVFDTLPERDV 177

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V  T +I+   Q G   +A+ LF  +   G   +  T + +V+A S L     GKQ+H+ 
Sbjct: 178 VSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 237

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +R  L   V +  SL+DMY+KC   G +  SR+VFD ML+ +V+SW A++ GY +  G 
Sbjct: 238 ILRKELPFFVALQNSLIDMYSKC---GKLLYSRRVFDNMLERSVVSWNAMLMGYGRH-GL 293

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVG 426
             E + LF D+   +V P+  T  +VL  C  G L+D  +   ++   VK   AL    G
Sbjct: 294 GHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGL--DIFDTVVKEQSALLH-TG 349

Query: 427 N--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           +   +I +  RSGR+E A    E++ FE     + +++ A
Sbjct: 350 HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGA 389



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 228/441 (51%), Gaps = 14/441 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           + A I AC     +  G  ++  ++   Y  + V +G  L+ M+V+    L+ A  V D+
Sbjct: 13  YEAAITACIERRALWEGRQVHARMITARYRPA-VFLGTRLVTMYVRCGA-LDDARNVLDR 70

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M E++ V WT MI+  +Q     +A+ LF+ M+ +G +P+ +TL+ V+++CS  +    G
Sbjct: 71  MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 130

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+HS  ++T     + VG SL+DMYAK     ++ ++R+VFD + + +V+S TAII+GY
Sbjct: 131 KQVHSLLVKTNFESHMFVGSSLLDMYAKSE---NIQEARRVFDTLPERDVVSCTAIISGY 187

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q  G D+EA+ LF  +    +  NH TF +++ A   L   +  +QV+   +++     
Sbjct: 188 AQK-GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF 246

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             + NSLI MY++ G++  +R+ F+++ E+++VS+N M+  Y ++    +   L  ++  
Sbjct: 247 VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK 306

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG---FESNHCIYNALISMYSRCAN 539
             V   + T  ++LSG S  G + +G  I   ++K       + H  Y  +I +  R   
Sbjct: 307 E-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGH--YGCIIDLLGRSGR 363

Query: 540 VEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +E A  + + M   +  S W S++     H       E+  + L +    N   Y+ + +
Sbjct: 364 LEKALNLIENMPFESTPSIWGSLLGACRVHA-NVHVGELVAQKLLEMEPENAGNYVILSN 422

Query: 599 ACSHAGLISEGWKHFRSMYDE 619
             + AG+  + +K  + M ++
Sbjct: 423 IYAAAGMWKDVFKVRKLMLEK 443



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 136/264 (51%), Gaps = 11/264 (4%)

Query: 58  RVQKAIFTLDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           + ++ +  LDL   M + G  P+  T + +L SC   ++ + GK VHSLL ++  E +  
Sbjct: 88  QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMF 147

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + +SL+ +Y+K  ++ EA ++F ++  +RD+VS +++IS Y  +G   +A+ +F ++   
Sbjct: 148 VGSSLLDMYAKSENIQEARRVFDTL-PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE 206

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVD 232
           G   N   F+ ++ A S   ++  G  ++  +L+    +F   V +  +LIDM+ K    
Sbjct: 207 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF---VALQNSLIDMYSKCGKL 263

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L S  +VFD M E++ V W  M+    + G   + I LF D+      PD  TL  V+S 
Sbjct: 264 LYSR-RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSG 321

Query: 293 CSELELFTSGKQLHSWAIRTGLAL 316
           CS   L   G  +    ++   AL
Sbjct: 322 CSHGGLVDEGLDIFDTVVKEQSAL 345


>gi|51090919|dbj|BAD35524.1| selenium-binding protein-like [Oryza sativa Japonica Group]
 gi|51090953|dbj|BAD35556.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 615

 Score =  454 bits (1168), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 222/572 (38%), Positives = 349/572 (61%), Gaps = 5/572 (0%)

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC E      G+Q+H+  I       V +G  LV MY +C   G++DD+R V DRM +
Sbjct: 49  ITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRC---GALDDARNVLDRMPE 105

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT +I+GY Q+  R  EA+ LF  M++    PN +T A+VL +C         +Q
Sbjct: 106 RSVVSWTTMISGYSQTE-RHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQ 164

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V++  VK        VG+SL+ MYA+S  +++AR+ F++L E+++VS   ++  YA+   
Sbjct: 165 VHSLLVKTNFESHMFVGSSLLDMYAKSENIQEARRVFDTLPERDVVSCTAIISGYAQKGL 224

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E+A +L  ++   G+  +  TF +L++  S + ++  G+Q+HA I++        + N+
Sbjct: 225 DEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFFVALQNS 284

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MYS+C  +  + +VF  M +R+V+SW +M+ G+ +HG     + +F K L   +KP+
Sbjct: 285 LIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLF-KDLHKEVKPD 343

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T +AVLS CSH GL+ EG   F ++  E   +    HY C++DLLGRSG L +AL  I
Sbjct: 344 SVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGHYGCIIDLLGRSGRLEKALNLI 403

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            +MP  +   +W + LGACRVH +  +G+  A+ +LE +P++   +++LSN+YA+AG W+
Sbjct: 404 ENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEMEPENAGNYVILSNIYAAAGMWK 463

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V  +RK M E+ + KE G SWI  D  +H FH  E  HP   +I A++ ++ + IK  G
Sbjct: 464 DVFKVRKLMLEKTVTKEPGQSWIILDKVIHTFHSSERFHPSKKDINAKIKEIFVDIKAAG 523

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++PD + VLH++++EQK + L  HSEK+A+ FGL++T     IRV KNLR+C DCH   K
Sbjct: 524 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMNTPPGLTIRVMKNLRICVDCHNFAK 583

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++S V  REI LRD NRFH +  G C+C DYW
Sbjct: 584 FVSKVYEREISLRDKNRFHLLTHGNCTCGDYW 615



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/428 (31%), Positives = 226/428 (52%), Gaps = 25/428 (5%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G       Y   + +CI  R    G+ VH+ +  ++  P   +   L+++Y +CG 
Sbjct: 33  MALPGASARFHEYEAAITACIERRALWEGRQVHARMITARYRPAVFLGTRLVTMYVRCGA 92

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L++A  +   M  +R +VSW++MIS Y    + V+A+ +F++ML  G  PNEY  + V+ 
Sbjct: 93  LDDARNVLDRM-PERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLT 151

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           +CS  +++  G  ++  L+K   F+S + VG +L+DM+ K S +++ A +VFD + E++ 
Sbjct: 152 SCSGPQSIYQGKQVHSLLVKTN-FESHMFVGSSLLDMYAK-SENIQEARRVFDTLPERDV 209

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V  T +I+   Q G   +A+ LF  +   G   +  T + +V+A S L     GKQ+H+ 
Sbjct: 210 VSCTAIISGYAQKGLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHAL 269

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +R  L   V +  SL+DMY+KC   G +  SR+VFD ML+ +V+SW A++ GY +  G 
Sbjct: 270 ILRKELPFFVALQNSLIDMYSKC---GKLLYSRRVFDNMLERSVVSWNAMLMGYGRH-GL 325

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVG 426
             E + LF D+   +V P+  T  +VL  C  G L+D  +   ++   VK   AL    G
Sbjct: 326 GHEVISLFKDL-HKEVKPDSVTLLAVLSGCSHGGLVDEGL--DIFDTVVKEQSALLH-TG 381

Query: 427 N--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA-------YAKNLNSEKAFEL 476
           +   +I +  RSGR+E A    E++ FE     + +++ A       +   L ++K  E+
Sbjct: 382 HYGCIIDLLGRSGRLEKALNLIENMPFESTPSIWGSLLGACRVHANVHVGELVAQKLLEM 441

Query: 477 LHEIEDTG 484
             E E+ G
Sbjct: 442 --EPENAG 447



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/441 (27%), Positives = 228/441 (51%), Gaps = 14/441 (3%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           + A I AC     +  G  ++  ++   Y  + V +G  L+ M+V+    L+ A  V D+
Sbjct: 45  YEAAITACIERRALWEGRQVHARMITARYRPA-VFLGTRLVTMYVRCGA-LDDARNVLDR 102

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M E++ V WT MI+  +Q     +A+ LF+ M+ +G +P+ +TL+ V+++CS  +    G
Sbjct: 103 MPERSVVSWTTMISGYSQTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQG 162

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+HS  ++T     + VG SL+DMYAK     ++ ++R+VFD + + +V+S TAII+GY
Sbjct: 163 KQVHSLLVKTNFESHMFVGSSLLDMYAKSE---NIQEARRVFDTLPERDVVSCTAIISGY 219

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q  G D+EA+ LF  +    +  NH TF +++ A   L   +  +QV+   +++     
Sbjct: 220 AQK-GLDEEALDLFRQLYSEGMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF 278

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             + NSLI MY++ G++  +R+ F+++ E+++VS+N M+  Y ++    +   L  ++  
Sbjct: 279 VALQNSLIDMYSKCGKLLYSRRVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDLHK 338

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG---FESNHCIYNALISMYSRCAN 539
             V   + T  ++LSG S  G + +G  I   ++K       + H  Y  +I +  R   
Sbjct: 339 E-VKPDSVTLLAVLSGCSHGGLVDEGLDIFDTVVKEQSALLHTGH--YGCIIDLLGRSGR 395

Query: 540 VEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +E A  + + M   +  S W S++     H       E+  + L +    N   Y+ + +
Sbjct: 396 LEKALNLIENMPFESTPSIWGSLLGACRVHA-NVHVGELVAQKLLEMEPENAGNYVILSN 454

Query: 599 ACSHAGLISEGWKHFRSMYDE 619
             + AG+  + +K  + M ++
Sbjct: 455 IYAAAGMWKDVFKVRKLMLEK 475



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 136/264 (51%), Gaps = 11/264 (4%)

Query: 58  RVQKAIFTLDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           + ++ +  LDL   M + G  P+  T + +L SC   ++ + GK VHSLL ++  E +  
Sbjct: 120 QTERHVEALDLFIKMLRAGCIPNEYTLATVLTSCSGPQSIYQGKQVHSLLVKTNFESHMF 179

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + +SL+ +Y+K  ++ EA ++F ++  +RD+VS +++IS Y  +G   +A+ +F ++   
Sbjct: 180 VGSSLLDMYAKSENIQEARRVFDTL-PERDVVSCTAIISGYAQKGLDEEALDLFRQLYSE 238

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVD 232
           G   N   F+ ++ A S   ++  G  ++  +L+    +F   V +  +LIDM+ K    
Sbjct: 239 GMQCNHVTFTTLVTALSGLASLDYGKQVHALILRKELPFF---VALQNSLIDMYSKCGKL 295

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L S  +VFD M E++ V W  M+    + G   + I LF D+      PD  TL  V+S 
Sbjct: 296 LYSR-RVFDNMLERSVVSWNAMLMGYGRHGLGHEVISLFKDL-HKEVKPDSVTLLAVLSG 353

Query: 293 CSELELFTSGKQLHSWAIRTGLAL 316
           CS   L   G  +    ++   AL
Sbjct: 354 CSHGGLVDEGLDIFDTVVKEQSAL 377


>gi|225464746|ref|XP_002265138.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic [Vitis vinifera]
          Length = 825

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/781 (33%), Positives = 438/781 (56%), Gaps = 31/781 (3%)

Query: 19  KPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHP 76
           + S+  RQ  P  +   F + P  +  L N +I  +  N+  +   +F   +        
Sbjct: 43  RLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKF 102

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC---------- 126
           D  T+S  LK+C ++R+  LGK +H  + RS    + ++ NSL+++YS C          
Sbjct: 103 DSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTA 162

Query: 127 GDLNEAN---KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            D N  +   ++F +M  KR++V+W++MIS YV   + ++A  MF  M+ +G  P    F
Sbjct: 163 YDFNNCDLVRRVFDTM-RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
             V  A     +    +++YG ++K G  F  D  V  + I M+ + G VD   A ++FD
Sbjct: 222 VNVFPAVWRMSDYDNANVLYGLVVKLGSDFVDDFFVVSSAIFMYAELGCVDF--AREIFD 279

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFT 300
              E+NT  W  MI    Q  CP +AI LF+ ++ S  F+ D  T    ++A S+L+   
Sbjct: 280 CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFVLDDVTFLSALTAISQLQWLE 339

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+QLH++ +++   L V +  +++ MY++C   GS+  S KVF  ML+ +V++W  +++
Sbjct: 340 LGRQLHAYILKSSTILQVVILNAIIVMYSRC---GSIGTSFKVFSNMLERDVVTWNTMVS 396

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            +VQ+G  D+  + +F+   QG +  +  T  ++L    NL    + +Q + + ++ G  
Sbjct: 397 AFVQNGLDDEGLMLVFAMQKQGFMV-DSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ 455

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFE--SLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
            +  + + LI MYA+SG +  A++ FE  S ++++  ++N M+  Y +N  SE+ F +  
Sbjct: 456 FEG-MDSYLIDMYAKSGLITTAQQLFEKNSDYDRDEATWNAMIAGYTQNGLSEEGFAVFR 514

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++ +  V  +A T AS+L   + +G IG G+QIH   I+     N  +  AL+ MYS+  
Sbjct: 515 KMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNRNVFVGTALLDMYSKSG 574

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            +  A  VF E  ++N +++T+MI+ + +HG   RAL +F+ ML  GIKP+ +T++A+LS
Sbjct: 575 AITYAENVFAETLEKNSVTYTTMISSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILS 634

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACS+AGL+ EG + F+SM  E+ I    EHY C+ D+LGR G + EA EF++ +    + 
Sbjct: 635 ACSYAGLVDEGLRIFQSMEREYKIQPSAEHYCCVADMLGRVGRVVEAYEFVKGLGEEGNT 694

Query: 659 L-VWRTFLGACRVHGDTELGKHAAEMILEQDPQD--PAAHILLSNLYASAGHWEYVANIR 715
             +W + LGACR+HG+ ELGK  A  +LE +        H+LLSN+YA+ G+W+ V  +R
Sbjct: 695 FGIWGSLLGACRIHGEFELGKVVANKLLEMEKGSSLTGYHVLLSNIYAAEGNWDNVDRVR 754

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K M+++ L+KEAGCSW+E    V+ F   +  HP+  EIY  L++LA+++K+ GY P  N
Sbjct: 755 KEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLN 814

Query: 776 F 776
            
Sbjct: 815 L 815


>gi|147790104|emb|CAN67593.1| hypothetical protein VITISV_000699 [Vitis vinifera]
          Length = 825

 Score =  454 bits (1167), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 259/781 (33%), Positives = 430/781 (55%), Gaps = 31/781 (3%)

Query: 19  KPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHP 76
           + S+  RQ  P  +   F + P  +  L N +I  +  N+  +   +F   +        
Sbjct: 43  RLSHLCRQGHPHQALHLFDSIPRPTTVLWNTIIIGFICNNMPIDALLFYARMRASPSPKF 102

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC---------- 126
           D  T+S  LK+C ++R+  LGK +H  + RS    + ++ NSL+++YS C          
Sbjct: 103 DSYTFSSTLKACAQARSLKLGKALHCHVLRSHFGSSRIVYNSLLNMYSTCLTEVPYLGTA 162

Query: 127 GDLNEAN---KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            D N  +   ++F +M  KR++V+W++MIS YV   + ++A  MF  M+ +G  P    F
Sbjct: 163 YDFNNCDLVRRVFDTM-RKRNVVAWNTMISWYVKTERLIEAFKMFRTMMRMGIRPTPVSF 221

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCG--YFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
             V  A     +    +++YG ++K G  Y D    V  A+      G VD   A ++FD
Sbjct: 222 VNVFPAVWRMNDYDNANVLYGLVVKLGSDYVDDFFVVSSAIFMYAELGCVDF--AREIFD 279

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFT 300
              E+NT  W  MI    Q  CP +AI LF+ ++ S  F  D  T    ++A S+L+   
Sbjct: 280 CCLERNTEVWNTMIGGYVQNNCPIEAIDLFVQVMESEQFXLDDVTFLSALTAISQLQWLD 339

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+QLH++ +++   L V +  +++ MY++C   GS+  S KVF  ML+ +V++W  +++
Sbjct: 340 LGRQLHAYILKSSTILQVVILNAIIVMYSRC---GSIGTSFKVFSNMLERDVVTWNTMVS 396

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            +VQ+G  D E + L  +M +     +  T  ++L    NL    + +Q + + ++ G  
Sbjct: 397 AFVQNG-LDDEGLMLVFEMQKQGFMVDSVTLTALLSLASNLRSQEIGKQAHAYLIRHGIQ 455

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFE--SLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
            +   G  LI MYA+SG +  A++ FE  S ++++  ++N M+  Y +N  SE+ F +  
Sbjct: 456 FEGMDG-YLIDMYAKSGLITTAQQLFEKNSXYDRDEATWNAMIAGYTQNGLSEEGFAVFR 514

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++ +  V  +A T AS+L   + +G IG G+QIH   I+     N  +  AL+ MYS+  
Sbjct: 515 KMIEQNVRPNAVTLASILPACNPMGTIGLGKQIHGFAIRCFLNQNVFVGTALLDMYSKSG 574

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            +  A  VF E  ++N +++T+MI  + +HG   RAL +F+ ML  GIKP+ +T++A+LS
Sbjct: 575 AITYAENVFAETLEKNSVTYTTMILSYGQHGMGERALSLFHAMLGSGIKPDSVTFVAILS 634

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACS+AGL+ EG + F+SM  E+ I    EHY C+ D+LGR G + EA EF++ +    + 
Sbjct: 635 ACSYAGLVDEGLRIFQSMEREYKIQPSSEHYCCVADMLGRVGRVXEAYEFVKGLGEEGNT 694

Query: 659 L-VWRTFLGACRVHGDTELGKHAAEMILEQDPQD--PAAHILLSNLYASAGHWEYVANIR 715
             +W + LGACR+HG+ ELGK  A  +LE +        H+LLSN+YA+ G+W+ V  +R
Sbjct: 695 FRIWGSLLGACRIHGEFELGKVVANKLLEMEKGSXLTGYHVLLSNIYAAEGNWDNVDRVR 754

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
           K M+++ L+KEAGCSW+E    V+ F   +  HP+  EIY  L++LA+++K+ GY P  N
Sbjct: 755 KEMRQKGLMKEAGCSWVEVAGHVNCFMSRDHKHPQCAEIYQMLEKLAMEMKDAGYKPCLN 814

Query: 776 F 776
            
Sbjct: 815 L 815


>gi|357131819|ref|XP_003567531.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Brachypodium distachyon]
          Length = 822

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 249/714 (34%), Positives = 410/714 (57%), Gaps = 7/714 (0%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+F        G  P+    +  L++C +SR    G+ VH +  R  L+ N  +  +LI+
Sbjct: 98  ALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQQVHGVAVRIGLDGNVYVGTALIN 157

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           LY+K G ++ A  +F ++  K + V+W+++I+ Y   G+   A+ +F +M   G  P+ +
Sbjct: 158 LYAKVGCIDAAMLVFDALPVK-NPVTWTAVITGYSQIGQGGVALELFGKMGLDGVRPDRF 216

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
             ++ + ACS    +  G   +G+  +    ++D  V  ALID++ K S  L  A K+FD
Sbjct: 217 VLASAVSACSALGFLEGGRQTHGYAYRIA-VETDASVINALIDLYCKCS-RLSLARKLFD 274

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            M  +N V WT MI    Q  C  +A+ +F  +   G+ PD F  + ++++C  L     
Sbjct: 275 CMENRNLVSWTTMIAGYMQNSCDAEAMAMFWQLSQEGWQPDVFACASILNSCGSLAAIWQ 334

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+Q+H+ AI+  L  D  V  SL+DMYAKC     + ++R VF+ + + + +S+ A+I G
Sbjct: 335 GRQVHAHAIKANLESDEYVKNSLIDMYAKCE---HLTEARAVFEALAEDDAISYNAMIEG 391

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y + G     A+ +FS M    + P+  TF S+L    +     +++Q++   VK G +L
Sbjct: 392 YSRLGDL-AGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSL 450

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D   G+SLI +Y++   +EDA+  F  +  +++V +N M+   A+N   E+A +L ++++
Sbjct: 451 DLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWNAMIFGLAQNEQGEEAVKLFNQLQ 510

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
            +G+  + +TF +L++ AS++ ++  G+Q HA+IIK+G +S+H + NALI MY++C  ++
Sbjct: 511 VSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGADSDHHVSNALIDMYAKCGFIK 570

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
               +F+    ++VI W SMI+ +A+HG A  AL +F  M   G++PN +T++ VLSAC+
Sbjct: 571 EGRLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACA 630

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGL+ EG +HF  M  ++ I    EHYA +V+L GRSG L  A EFI  MP+     VW
Sbjct: 631 HAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLFGRSGKLHAAKEFIERMPIEPAAAVW 690

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           R+ L AC + G+ E+G++A EM L  DP D    +L+SN+YAS G W     +R+ M   
Sbjct: 691 RSLLSACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLWSDAQKLRQGMDCA 750

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
            ++KE G SWIE   +VH F      HP+   IY+ LD+L   +K  GYLPDT+
Sbjct: 751 GVVKEPGYSWIEVMKEVHTFIARGREHPEADVIYSLLDELTSILKNGGYLPDTS 804



 Score =  319 bits (818), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 199/596 (33%), Positives = 320/596 (53%), Gaps = 14/596 (2%)

Query: 84  LLKSCIRSRNFH-LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
           LL SC+     H L  L H+    +   P+  + N L+  YSK G + +A ++F  M +K
Sbjct: 16  LLLSCLAGDRLHRLLPLAHARAVVTGALPDLFLANLLLRAYSKLGRVRDARRLFDRMPHK 75

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL--GFCPNEYCFSAVIRACSNTENVAIGH 200
            ++VSW S IS +   G + DA+ +F        G  PNE+  ++ +RAC+ +  V+ G 
Sbjct: 76  -NLVSWGSAISMHAQHGCEEDAVALFAAFQRASGGEAPNEFLLASALRACAQSRAVSFGQ 134

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            ++G  ++ G  D +V VG ALI+++ K G +D  +A  VFD +  KN V WT +IT  +
Sbjct: 135 QVHGVAVRIG-LDGNVYVGTALINLYAKVGCID--AAMLVFDALPVKNPVTWTAVITGYS 191

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q+G    A+ LF  M L G  PDRF L+  VSACS L     G+Q H +A R  +  D  
Sbjct: 192 QIGQGGVALELFGKMGLDGVRPDRFVLASAVSACSALGFLEGGRQTHGYAYRIAVETDAS 251

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  +L+D+Y KC+    +  +RK+FD M + N++SWT +I GY+Q+   D EA+ +F  +
Sbjct: 252 VINALIDLYCKCS---RLSLARKLFDCMENRNLVSWTTMIAGYMQNSC-DAEAMAMFWQL 307

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            Q    P+ F  AS+L +CG+L       QV+ HA+K     D+ V NSLI MYA+   +
Sbjct: 308 SQEGWQPDVFACASILNSCGSLAAIWQGRQVHAHAIKANLESDEYVKNSLIDMYAKCEHL 367

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
            +AR  FE+L E + +SYN M++ Y++  +   A ++  ++    +  S  TF SLL  +
Sbjct: 368 TEARAVFEALAEDDAISYNAMIEGYSRLGDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVS 427

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           SS  AI   +QIH  I+KSG   +    ++LI +YS+ + VE A  VF  M +R+++ W 
Sbjct: 428 SSQSAIELSKQIHGLIVKSGTSLDLYAGSSLIDVYSKFSLVEDAKAVFNLMHNRDMVIWN 487

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G A++     A+++F ++   G+ PN  T++A+++  S    +  G + F +   +
Sbjct: 488 AMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHG-QQFHAQIIK 546

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            G          ++D+  + G + E      S  L  DV+ W + +     HG  E
Sbjct: 547 AGADSDHHVSNALIDMYAKCGFIKEGRLLFES-TLGKDVICWNSMISTYAQHGQAE 601



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 94/375 (25%), Positives = 171/375 (45%), Gaps = 24/375 (6%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G +  AI     M      P   T+  LL          L K +H L+ +S    +    
Sbjct: 396 GDLAGAIDVFSKMRYCSLKPSPLTFVSLLGVSSSQSAIELSKQIHGLIVKSGTSLDLYAG 455

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SLI +YSK   + +A  +F  M N RD+V W++MI       +  +A+ +F ++   G 
Sbjct: 456 SSLIDVYSKFSLVEDAKAVFNLMHN-RDMVIWNAMIFGLAQNEQGEEAVKLFNQLQVSGL 514

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PNE+ F A++   S   ++  G   +  ++K G  DSD  V  ALIDM+ K    ++  
Sbjct: 515 APNEFTFVALVTVASTLVSMFHGQQFHAQIIKAGA-DSDHHVSNALIDMYAKCGF-IKEG 572

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +F+    K+ + W  MI+   Q G   +A+ +F  M  +G  P+  T  GV+SAC+  
Sbjct: 573 RLLFESTLGKDVICWNSMISTYAQHGQAEEALYVFRMMGGTGVEPNYVTFVGVLSACAHA 632

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVG--CSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVM 353
            L   G + H   ++T  A++       S+V+++ +    G +  +++  +RM ++    
Sbjct: 633 GLVDEGLR-HFDFMKTKYAIEPGTEHYASVVNLFGR---SGKLHAAKEFIERMPIEPAAA 688

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV--AEQVY 411
            W ++++           A  LF ++  G+ A      A    +  ++L SN+  +  ++
Sbjct: 689 VWRSLLS-----------ACHLFGNVEIGRYATEMALLADPADSGPSVLMSNIYASRGLW 737

Query: 412 THAVKRGRALDDCVG 426
           + A K  + + DC G
Sbjct: 738 SDAQKLRQGM-DCAG 751



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 106/217 (48%), Gaps = 4/217 (1%)

Query: 48  NRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N +I+ L  + + ++A+   + +   G  P+  T+  L+       +   G+  H+ + +
Sbjct: 487 NAMIFGLAQNEQGEEAVKLFNQLQVSGLAPNEFTFVALVTVASTLVSMFHGQQFHAQIIK 546

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           +  + +  + N+LI +Y+KCG + E   +F+S   K D++ W+SMIS+Y   G+  +A++
Sbjct: 547 AGADSDHHVSNALIDMYAKCGFIKEGRLLFESTLGK-DVICWNSMISTYAQHGQAEEALY 605

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M   G  PN   F  V+ AC++   V  G   + F+      +       +++++F
Sbjct: 606 VFRMMGGTGVEPNYVTFVGVLSACAHAGLVDEGLRHFDFMKTKYAIEPGTEHYASVVNLF 665

Query: 227 VKGSVDLESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
            + S  L +A +  ++M  E     W  +++ C   G
Sbjct: 666 GR-SGKLHAAKEFIERMPIEPAAAVWRSLLSACHLFG 701


>gi|413946615|gb|AFW79264.1| putative pentatricopeptide repeat family protein [Zea mays]
          Length = 682

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/664 (36%), Positives = 393/664 (59%), Gaps = 12/664 (1%)

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           G  ++  L+   +FD  V +   LI  + K G V L  A  VFD M  +N V   L+++ 
Sbjct: 30  GKALHARLITAAHFD--VVLHNNLISFYAKCGRVGL--ARTVFDAMPFRNAVSANLLMSG 85

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
               G  +++++L   + +  F  + + LS  VSA + +  +  G+Q H +A++ G A  
Sbjct: 86  YASSGRHKESLQL---LRVVDFGMNEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQ 142

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             V  +++ MY +C     ++D+ KVF+ +   +  ++ ++I GY+  G  D  ++ +  
Sbjct: 143 RYVFNAVLYMYCQCA---HMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDG-SLGIVR 198

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           +M       ++ ++ +VL  C ++ DS +  QV+  A+K+   L+  VG++L+ MY +  
Sbjct: 199 NMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCD 258

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            + DA +AFE L EKN+VS+  ++ AY +N   E A +L  ++E  GV  + +T+A  L+
Sbjct: 259 HVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYEDALQLFLDMEMEGVQPNEFTYAVALN 318

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + + A+  G  + A ++K+G   +  + NAL++MYS+  ++E A +VF  M  R+V+S
Sbjct: 319 SCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVVS 378

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W  +ITG+A HG A   +E F+ ML+  + P+ +T++ VLSAC+  GL+ E + +  +M 
Sbjct: 379 WNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTMM 438

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            E GI    EHY CMV LL R G L EA  FI +  +  DV+ WR+ L +C+V+ +  LG
Sbjct: 439 KEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGLG 498

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
              AE IL+ +P D   ++LLSN+YA A  W+ V  +RK M+ER + K  G SWI   + 
Sbjct: 499 HRVAEQILQLEPSDVGTYVLLSNMYAKANRWDGVVKVRKHMRERAVRKSPGVSWIHVGSD 558

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           VH F   E  HP+  +I  +L++L  +IK  GY+P+   VLH++++E+K ++L  HSEK+
Sbjct: 559 VHVFTSEEKVHPQMDQIAKKLEELIDQIKAIGYVPNFAVVLHDIDDERKEEHLMYHSEKL 618

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A+AFGLI T K   I + KNLR+C DCH AIK IS+VT R+IV+RD+ RFH I+ G CSC
Sbjct: 619 ALAFGLIHTPKGATIHIMKNLRICDDCHVAIKLISVVTSRKIVVRDAVRFHCIEGGICSC 678

Query: 858 NDYW 861
           NDYW
Sbjct: 679 NDYW 682



 Score =  181 bits (458), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 245/486 (50%), Gaps = 18/486 (3%)

Query: 97  GKLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           GK +H+ L+T +  +   V+ N+LIS Y+KCG +  A  +F +M   R+ VS + ++S Y
Sbjct: 30  GKALHARLITAAHFDV--VLHNNLISFYAKCGRVGLARTVFDAM-PFRNAVSANLLMSGY 86

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
            + G+  +++ +   +++ G   NEY  SA + A +N  +  +G   +G+ +K G+ +  
Sbjct: 87  ASSGRHKESLQLL-RVVDFGM--NEYVLSAAVSATANVRSYDMGRQCHGYAVKAGFAEQR 143

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
             V  A++ M+ +    +E A KVF+ ++  +   +  MI      G    ++ +  +M 
Sbjct: 144 Y-VFNAVLYMYCQ-CAHMEDASKVFESVSGFDAFAFNSMINGYLDRGQLDGSLGIVRNMT 201

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
                 D  +   V+  C+ ++    G Q+H+ A++  L L+V VG +LVDMY KC    
Sbjct: 202 GEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELNVYVGSALVDMYGKCD--- 258

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            V D+ + F+ + + NV+SWTA++T Y Q+   + +A++LF DM    V PN FT+A  L
Sbjct: 259 HVHDANRAFEVLPEKNVVSWTAVMTAYTQNELYE-DALQLFLDMEMEGVQPNEFTYAVAL 317

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
            +C  L        +    +K G      V N+L++MY++SG +EDA + F S+  +++V
Sbjct: 318 NSCAGLAALRTGNALGACVMKTGHWDHLLVSNALMNMYSKSGSIEDAHRVFISMPLRDVV 377

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           S+N ++  YA +  + +  E  H +    V  S  TF  +LS  + +G + +       +
Sbjct: 378 SWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSACAQLGLVDEAFYYLNTM 437

Query: 516 IKS-GFESNHCIYNALISMYSRCANVEAAFQ-VFKEMEDRNVISWTSMITG---FAKHGF 570
           +K  G       Y  ++ +  R   ++ A + +       +V++W S++     +  +G 
Sbjct: 438 MKEVGITPGKEHYTCMVGLLCRVGRLDEAERFIVNNCIGTDVVAWRSLLNSCQVYKNYGL 497

Query: 571 AARALE 576
             R  E
Sbjct: 498 GHRVAE 503



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 69/246 (28%), Positives = 138/246 (56%), Gaps = 3/246 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L+ G++  ++  +  MT +    D  +Y  +L  C   ++  LG  VH+   + +LE N
Sbjct: 184 YLDRGQLDGSLGIVRNMTGEAEKWDYVSYVAVLGHCASMKDSVLGAQVHAQALKKRLELN 243

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + ++L+ +Y KC  +++AN+ F+ +  K ++VSW++++++Y       DA+ +F++M 
Sbjct: 244 VYVGSALVDMYGKCDHVHDANRAFEVLPEK-NVVSWTAVMTAYTQNELYEDALQLFLDME 302

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PNE+ ++  + +C+    +  G+ +   ++K G++D  + V  AL++M+ K S  
Sbjct: 303 MEGVQPNEFTYAVALNSCAGLAALRTGNALGACVMKTGHWDH-LLVSNALMNMYSK-SGS 360

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A++VF  M  ++ V W L+IT     G  R+ +  F  M+ +  +P   T  GV+SA
Sbjct: 361 IEDAHRVFISMPLRDVVSWNLIITGYAHHGLAREGMEAFHSMLSAAVIPSYVTFVGVLSA 420

Query: 293 CSELEL 298
           C++L L
Sbjct: 421 CAQLGL 426



 Score = 48.1 bits (113), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 25/76 (32%), Positives = 43/76 (56%), Gaps = 1/76 (1%)

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           G + KG+ +HAR+I +    +  ++N LIS Y++C  V  A  VF  M  RN +S   ++
Sbjct: 25  GDLSKGKALHARLITAA-HFDVVLHNNLISFYAKCGRVGLARTVFDAMPFRNAVSANLLM 83

Query: 563 TGFAKHGFAARALEIF 578
           +G+A  G    +L++ 
Sbjct: 84  SGYASSGRHKESLQLL 99


>gi|225433487|ref|XP_002264838.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06140,
           mitochondrial [Vitis vinifera]
 gi|298205230|emb|CBI17289.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 228/630 (36%), Positives = 372/630 (59%), Gaps = 5/630 (0%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A K F+ +T +N   W  ++   ++  C  D ++LF  M+  G L D F L   V A
Sbjct: 63  LHVASKAFNHITFENLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKA 122

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C  L LF   K  HS AI+  L  D  V  +L+++Y +    GS++++ KVF+ +   N 
Sbjct: 123 CFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTEL---GSLEEAHKVFEEVPLKNS 179

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           + W  +I G++     +    +LFS M +     + F    +++ACGN+      +  + 
Sbjct: 180 VIWGVMIKGHLNFS-EEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHG 238

Query: 413 HAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             +K+     +  +  SL+ MY + G ++ A K FE +  +++V ++ ++  +A+N  + 
Sbjct: 239 LCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRAL 298

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           ++  +  ++    V  ++ TFAS++   SS+G++ +G  +H  +I++G E +   Y + I
Sbjct: 299 ESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGVELDVKNYTSFI 358

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C  +  A++VF ++ ++NV SW++MI GF  HG  A AL +FY+M +    PN +
Sbjct: 359 DMYAKCGCIVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSVNQLPNSV 418

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+++VLSACSH+G I EGW HF+SM  ++GI    EHYACMVDLLGR+G + EAL FI +
Sbjct: 419 TFVSVLSACSHSGRIEEGWSHFKSMSRDYGITPVEEHYACMVDLLGRAGKIDEALSFINN 478

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP       W   LGACR+H   EL +  A+ +L  +      +++LSN+YA  G WE V
Sbjct: 479 MPTEPGASAWGALLGACRIHRRAELAEEVAKKLLPLESDQSGVYVMLSNIYADVGMWEMV 538

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
              R +M E+ + K  G + IE + K++ F   +    K  +I +  + L  +++E GY+
Sbjct: 539 KKTRLKMCEKGIHKIVGFTSIEIEEKLYLFSSEDRFAYKNTQIESLWNSLKERMRELGYV 598

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           PD  FVLH++++E K + L  HSEK+A+ FGL+++ +  PIR+ KN+RVCGDCHTA K+I
Sbjct: 599 PDLRFVLHDVDDEVKQEVLCGHSEKLAIVFGLLNSGEGMPIRITKNMRVCGDCHTASKFI 658

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S++T R+I++RD  RFHH++DG CSC DYW
Sbjct: 659 SLITRRKIIMRDVKRFHHVQDGVCSCGDYW 688



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 195/378 (51%), Gaps = 13/378 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G   D       +K+C     F   KL HSL  + +LE +  +  +L+++Y++ G 
Sbjct: 104 MLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAIKLRLEGDPYVAPALMNVYTELGS 163

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L EA+K+F+ +  K  ++ W  MI  ++N  ++     +F  M   GF  + +    +I+
Sbjct: 164 LEEAHKVFEEVPLKNSVI-WGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQ 222

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC N      G   +G  +K  + DS+  +  +L+DM++K    L+ A K+F++++ ++ 
Sbjct: 223 ACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMYMKCGF-LDFALKLFEEISYRDV 281

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W+ +I    + G   ++I +F  M+     P+  T + +V ACS L     G+ +H +
Sbjct: 282 VVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGY 341

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            IR G+ LDV    S +DMYAKC   G +  + +VF ++ + NV SW+ +I G+    G 
Sbjct: 342 MIRNGVELDVKNYTSFIDMYAKC---GCIVTAYRVFCQIPEKNVFSWSTMINGFGMH-GL 397

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH--AVKRGRALDDCVG 426
             EA+ LF +M      PN  TF SVL AC +   S   E+ ++H  ++ R   +     
Sbjct: 398 CAEALNLFYEMRSVNQLPNSVTFVSVLSACSH---SGRIEEGWSHFKSMSRDYGITPVEE 454

Query: 427 N--SLISMYARSGRMEDA 442
           +   ++ +  R+G++++A
Sbjct: 455 HYACMVDLLGRAGKIDEA 472



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 181/378 (47%), Gaps = 13/378 (3%)

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
             S  QL++  +   L   +  G  +   Y +    GS+  + K F+ +   N+ SW  I
Sbjct: 28  LASNHQLNAQILVNALHRSLLFGPMIFGAYIQL---GSLHVASKAFNHITFENLHSWNTI 84

Query: 359 ITGYVQSGGRDK---EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           +     S  ++K   + ++LF  M++     + F     +KAC  L     A+  ++ A+
Sbjct: 85  LA----SHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLFQGAKLFHSLAI 140

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K     D  V  +L+++Y   G +E+A K FE +  KN V +  M+  +         FE
Sbjct: 141 KLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSVIWGVMIKGHLNFSEEFGVFE 200

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF-ESNHCIYNALISMY 534
           L   +  +G     +    L+    ++ A  +G+  H   IK  F +SN  +  +L+ MY
Sbjct: 201 LFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGKTFHGLCIKKNFIDSNFFLQTSLVDMY 260

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C  ++ A ++F+E+  R+V+ W+++I GFA++G A  ++ +F +MLAD + PN +T+ 
Sbjct: 261 MKCGFLDFALKLFEEISYRDVVVWSAIIAGFARNGRALESISMFRQMLADSVTPNSVTFA 320

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           +++ ACS  G + +G +        +G+   +++Y   +D+  + G +  A      +P 
Sbjct: 321 SIVLACSSLGSLKQG-RSVHGYMIRNGVELDVKNYTSFIDMYAKCGCIVTAYRVFCQIP- 378

Query: 655 SADVLVWRTFLGACRVHG 672
             +V  W T +    +HG
Sbjct: 379 EKNVFSWSTMINGFGMHG 396



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 91/328 (27%), Positives = 162/328 (49%), Gaps = 23/328 (7%)

Query: 45  PLSNRLIY------HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
           PL N +I+      HLN             M + G   D      L+++C        GK
Sbjct: 175 PLKNSVIWGVMIKGHLNFSEEFGVFELFSRMRRSGFELDPFVVEGLIQACGNVYAGKEGK 234

Query: 99  LVHSL-LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
             H L + ++ ++ N  +  SL+ +Y KCG L+ A K+F+ + + RD+V WS++I+ +  
Sbjct: 235 TFHGLCIKKNFIDSNFFLQTSLVDMYMKCGFLDFALKLFEEI-SYRDVVVWSAIIAGFAR 293

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G+ +++I MF +ML     PN   F++++ ACS+  ++  G  ++G++++ G  + DV 
Sbjct: 294 NGRALESISMFRQMLADSVTPNSVTFASIVLACSSLGSLKQGRSVHGYMIRNGV-ELDVK 352

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
              + IDM+ K    + +AY+VF ++ EKN   W+ MI      G   +A+ LF +M   
Sbjct: 353 NYTSFIDMYAKCGC-IVTAYRVFCQIPEKNVFSWSTMINGFGMHGLCAEALNLFYEMRSV 411

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD--- 334
             LP+  T   V+SACS      SG+    W+    ++ D   G + V+ +  C VD   
Sbjct: 412 NQLPNSVTFVSVLSACSH-----SGRIEEGWSHFKSMSRD--YGITPVEEHYACMVDLLG 464

Query: 335 --GSVDDSRKVFDRM-LDHNVMSWTAII 359
             G +D++    + M  +    +W A++
Sbjct: 465 RAGKIDEALSFINNMPTEPGASAWGALL 492



 Score = 40.8 bits (94), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 37/172 (21%), Positives = 74/172 (43%), Gaps = 10/172 (5%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           +LLS       +    Q++A+I+ +    +      +   Y +  ++  A + F  +   
Sbjct: 17  TLLSLFRFTKTLASNHQLNAQILVNALHRSLLFGPMIFGAYIQLGSLHVASKAFNHITFE 76

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           N+ SW +++   +K+      L++F +ML +G   +    +  + AC    L  +G K F
Sbjct: 77  NLHSWNTILASHSKNKCFYDVLQLFKRMLKEGKLVDSFNLVFAVKACFGLSLF-QGAKLF 135

Query: 614 RSMYDEHGIVQRMEH----YACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
            S+     I  R+E        ++++    GSL EA +    +PL   V +W
Sbjct: 136 HSL----AIKLRLEGDPYVAPALMNVYTELGSLEEAHKVFEEVPLKNSV-IW 182


>gi|356530157|ref|XP_003533650.1| PREDICTED: pentatricopeptide repeat-containing protein At1g56690,
           mitochondrial-like [Glycine max]
          Length = 711

 Score =  453 bits (1166), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 251/754 (33%), Positives = 415/754 (55%), Gaps = 83/754 (11%)

Query: 120 ISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           I+ Y++ G L+ A K+F       R + SW++M+++Y    +  +A+ +F +M +     
Sbjct: 29  IACYARNGQLDHARKVFDETPLPHRTVSSWNAMVAAYFEARQPREALLLFEKMPQ----- 83

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-----DSDVCVGCALIDMFVKGSVDL 233
                    R   +   +  GHI  G L +         D +V    +++  +V+   D+
Sbjct: 84  ---------RNTVSWNGLISGHIKNGMLSEARRVFDTMPDRNVVSWTSMVRGYVRNG-DV 133

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A ++F  M  KN V WT+M+    Q G   DA +LF DM     +P++          
Sbjct: 134 AEAERLFWHMPHKNVVSWTVMLGGLLQEGRVDDARKLF-DM-----MPEK---------- 177

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
                                  DV    +++  Y +   +G +D++R +FD M   NV+
Sbjct: 178 -----------------------DVVAVTNMIGGYCE---EGRLDEARALFDEMPKRNVV 211

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDM-----IQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           +WTA+++GY ++G  D  A KLF  M     +        +T +  ++   +L D+   +
Sbjct: 212 TWTAMVSGYARNGKVDV-ARKLFEVMPERNEVSWTAMLLGYTHSGRMREASSLFDAMPVK 270

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V              V N +I  +  +G ++ AR+ F+ + E++  +++ M+  Y +  
Sbjct: 271 PV-------------VVCNEMIMGFGLNGEVDKARRVFKGMKERDNGTWSAMIKVYERKG 317

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              +A  L   ++  G+  +  +  S+LS   S+ ++  G+Q+HA++++S F+ +  + +
Sbjct: 318 YELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVAS 377

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
            LI+MY +C N+  A QVF     ++V+ W SMITG+++HG    AL +F+ M + G+ P
Sbjct: 378 VLITMYVKCGNLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPP 437

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + +T+I VLSACS++G + EG + F +M  ++ +   +EHYAC+VDLLGR+  + EA++ 
Sbjct: 438 DDVTFIGVLSACSYSGKVKEGLELFETMKCKYQVEPGIEHYACLVDLLGRADQVNEAMKL 497

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           +  MP+  D +VW   LGACR H   +L + A E + + +P++   ++LLSN+YA  G W
Sbjct: 498 VEKMPMEPDAIVWGALLGACRTHMKLDLAEVAVEKLAQLEPKNAGPYVLLSNMYAYKGRW 557

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKE 767
             V  +R+++K R++ K  GCSWIE + KVH F  G++  HP+   I   L++L   ++E
Sbjct: 558 RDVEVLREKIKARSVTKLPGCSWIEVEKKVHMFTGGDSKGHPEQPIIMKMLEKLGGLLRE 617

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            GY PD +FVLH+++EE+K   L  HSEK+AVA+GL+   +  PIRV KNLRVCGDCH+A
Sbjct: 618 AGYCPDGSFVLHDVDEEEKTHSLGYHSEKLAVAYGLLKVPEGMPIRVMKNLRVCGDCHSA 677

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IK I+ VTGREI+LRD+NRFHH KDG CSC DYW
Sbjct: 678 IKLIAKVTGREIILRDANRFHHFKDGHCSCKDYW 711



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 127/484 (26%), Positives = 228/484 (47%), Gaps = 57/484 (11%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           LL     + N+V  N LIS + K G L+EA ++F +M + R++VSW+SM+  YV  G   
Sbjct: 76  LLFEKMPQRNTVSWNGLISGHIKNGMLSEARRVFDTMPD-RNVVSWTSMVRGYVRNGDVA 134

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD--------- 213
           +A  +F  M      P+              +NV    ++ G LL+ G  D         
Sbjct: 135 EAERLFWHM------PH--------------KNVVSWTVMLGGLLQEGRVDDARKLFDMM 174

Query: 214 --SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
              DV     +I  + +    L+ A  +FD+M ++N V WT M++   + G    A +LF
Sbjct: 175 PEKDVVAVTNMIGGYCEEG-RLDEARALFDEMPKRNVVTWTAMVSGYARNGKVDVARKLF 233

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFT-SGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
                   +P+R      VS  + L  +T SG+   + ++   + +   V C+  +M   
Sbjct: 234 ------EVMPER----NEVSWTAMLLGYTHSGRMREASSLFDAMPVKPVVVCN--EMIMG 281

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
             ++G VD +R+VF  M + +  +W+A+I  Y +  G + EA+ LF  M +  +A N  +
Sbjct: 282 FGLNGEVDKARRVFKGMKERDNGTWSAMIKVY-ERKGYELEALGLFRRMQREGLALNFPS 340

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
             SVL  C +L   +  +QV+   V+     D  V + LI+MY + G +  A++ F    
Sbjct: 341 LISVLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAKQVFNRFP 400

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            K++V +N+M+  Y+++   E+A  + H++  +GV     TF  +LS  S  G + +G +
Sbjct: 401 LKDVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYSGKVKEGLE 460

Query: 511 IHARI-----IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
           +   +     ++ G E   C    L+ +  R   V  A ++ ++M  + + I W +++  
Sbjct: 461 LFETMKCKYQVEPGIEHYAC----LVDLLGRADQVNEAMKLVEKMPMEPDAIVWGALLGA 516

Query: 565 FAKH 568
              H
Sbjct: 517 CRTH 520



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 81/275 (29%), Positives = 142/275 (51%), Gaps = 23/275 (8%)

Query: 95  HLGKL--VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
           H G++    SL     ++P  V+ N +I  +   G++++A ++FK M  +RD  +WS+MI
Sbjct: 253 HSGRMREASSLFDAMPVKP-VVVCNEMIMGFGLNGEVDKARRVFKGM-KERDNGTWSAMI 310

Query: 153 SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
             Y  +G +++A+ +F  M   G   N     +V+  C +  ++  G  ++  L++   F
Sbjct: 311 KVYERKGYELEALGLFRRMQREGLALNFPSLISVLSVCVSLASLDHGKQVHAQLVR-SEF 369

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           D D+ V   LI M+VK   +L  A +VF++   K+ V W  MIT  +Q G   +A+ +F 
Sbjct: 370 DQDLYVASVLITMYVKCG-NLVRAKQVFNRFPLKDVVMWNSMITGYSQHGLGEEALNVFH 428

Query: 273 DMILSGFLPDRFTLSGVVSACS-------ELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           DM  SG  PD  T  GV+SACS        LELF + K    + +  G+    C    LV
Sbjct: 429 DMCSSGVPPDDVTFIGVLSACSYSGKVKEGLELFETMKC--KYQVEPGIEHYAC----LV 482

Query: 326 DMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAII 359
           D+  +      V+++ K+ ++M ++ + + W A++
Sbjct: 483 DLLGRAD---QVNEAMKLVEKMPMEPDAIVWGALL 514



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 96/187 (51%), Gaps = 8/187 (4%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           N P L +   +L  C+   +   GK VH+ L RS+ + +  + + LI++Y KCG+L  A 
Sbjct: 337 NFPSLIS---VLSVCVSLASLDHGKQVHAQLVRSEFDQDLYVASVLITMYVKCGNLVRAK 393

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F     K D+V W+SMI+ Y   G   +A+++F +M   G  P++  F  V+ ACS +
Sbjct: 394 QVFNRFPLK-DVVMWNSMITGYSQHGLGEEALNVFHDMCSSGVPPDDVTFIGVLSACSYS 452

Query: 194 ENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGW 251
             V  G  ++   +KC Y  +  +     L+D+  +    +  A K+ +KM  E + + W
Sbjct: 453 GKVKEGLELFE-TMKCKYQVEPGIEHYACLVDLLGRAD-QVNEAMKLVEKMPMEPDAIVW 510

Query: 252 TLMITRC 258
             ++  C
Sbjct: 511 GALLGAC 517


>gi|449444429|ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
 gi|449475689|ref|XP_004154524.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 229/581 (39%), Positives = 346/581 (59%), Gaps = 10/581 (1%)

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D  T S ++  C         + +H      G      +  +L++MY K    G +D++R
Sbjct: 15  DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKF---GLLDEAR 71

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            +FD M D NV+SWT +I+ Y  S    K A+     M++  V PN +T++SVL+AC  L
Sbjct: 72  NLFDEMPDRNVVSWTTMISAYSNSNLNHK-ALDFLILMLREGVRPNMYTYSSVLRACDGL 130

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
           L+     Q++   +K G   D  V ++LI  Y++ G   DA   F  +   +LV +N+++
Sbjct: 131 LN---LRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNVFNEMITGDLVVWNSII 187

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
             +A+N + ++   L   ++         T  S+L   + +  +  G Q+H  ++K  ++
Sbjct: 188 GGFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLK--YD 245

Query: 522 SNHCIYNALISMYSRCANVEAAFQVF-KEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            +  + NAL+ MY +C ++E A  +F + M +++VISW++MI G A++GF+A AL++F  
Sbjct: 246 QDLILNNALLDMYCKCGSLEDANLLFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEA 305

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M + G KPN IT + VL ACSHAGL+++GW +F+SM +  GI    EHY C++DLLGR+G
Sbjct: 306 MKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCIIDLLGRAG 365

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            L EA++ I  M    D + WR  LGACRVH + +L  +AA+ IL+ DP D   +ILLSN
Sbjct: 366 KLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEILKLDPADAGTYILLSN 425

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +YA++  WE VA +R++M+ R + K+ GCSWIE   +VH F +G+ SHP+  EI  EL Q
Sbjct: 426 IYANSQKWEDVAEVRRKMRTRGVKKDPGCSWIEVSKQVHAFILGDNSHPRIEEIKRELSQ 485

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           L  ++   GY+PDTNFVL +LE EQ    L  HSEK+A+ FGL+S    K I + KNLR+
Sbjct: 486 LIQRLMRLGYVPDTNFVLQDLEGEQMEDSLQYHSEKLAIVFGLMSLPNQKTIHIRKNLRI 545

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CGDCH   K +S +  R IV+RD  R+HH + G CSC DYW
Sbjct: 546 CGDCHIFAKLVSQLENRVIVIRDPIRYHHFRGGVCSCGDYW 586



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 129/411 (31%), Positives = 214/411 (52%), Gaps = 23/411 (5%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  TYS L+K C+        +LVH  +  +  EP + ++N+LI++Y K G L+EA  +F
Sbjct: 15  DAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFGLLDEARNLF 74

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M + R++VSW++MIS+Y N      A+   + ML  G  PN Y +S+V+RAC    N+
Sbjct: 75  DEMPD-RNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL 133

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
                ++G +LK G  +SDV V  ALID + K   +   A  VF++M   + V W  +I 
Sbjct: 134 ---RQLHGSILKVG-LESDVFVRSALIDTYSKLG-EQHDALNVFNEMITGDLVVWNSIIG 188

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              Q     + + L+  M  + F+ D+ TL+ V+ AC+ L L   G+Q+H   ++     
Sbjct: 189 GFAQNSDGDETLHLYKRMKRADFVADQSTLTSVLRACTGLALLELGRQVHVHVLKYD--Q 246

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTAIITGYVQSGGRDKEAVKL 375
           D+ +  +L+DMY KC   GS++D+  +F RM+ + +V+SW+ +I G  Q+ G   +A+KL
Sbjct: 247 DLILNNALLDMYCKC---GSLEDANLLFTRMMTEKDVISWSTMIAGLAQN-GFSADALKL 302

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVA----EQVYTH-AVKRGRALDDCVGNSLI 430
           F  M      PN+ T   VL AC +    N      + +  H  +  GR    C+    I
Sbjct: 303 FEAMKSKGPKPNYITILGVLFACSHAGLVNDGWYYFQSMKEHFGIDPGREHYGCI----I 358

Query: 431 SMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +  R+G++++A K    +  E + V++  ++ A   + N + A     EI
Sbjct: 359 DLLGRAGKLDEAVKLIHEMNHEPDAVTWRILLGACRVHKNVDLAIYAAKEI 409



 Score =  117 bits (293), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 77/245 (31%), Positives = 131/245 (53%), Gaps = 11/245 (4%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
            KA+  L LM ++G  P++ TYS +L++C    N    + +H  + +  LE +  + ++L
Sbjct: 99  HKALDFLILMLREGVRPNMYTYSSVLRACDGLLNL---RQLHGSILKVGLESDVFVRSAL 155

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I  YSK G+ ++A  +F  M    D+V W+S+I  +       + +H++  M    F  +
Sbjct: 156 IDTYSKLGEQHDALNVFNEMITG-DLVVWNSIIGGFAQNSDGDETLHLYKRMKRADFVAD 214

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
           +   ++V+RAC+    + +G  ++  +LK   +D D+ +  AL+DM+ K GS  LE A  
Sbjct: 215 QSTLTSVLRACTGLALLELGRQVHVHVLK---YDQDLILNNALLDMYCKCGS--LEDANL 269

Query: 239 VFDK-MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F + MTEK+ + W+ MI    Q G   DA++LF  M   G  P+  T+ GV+ ACS   
Sbjct: 270 LFTRMMTEKDVISWSTMIAGLAQNGFSADALKLFEAMKSKGPKPNYITILGVLFACSHAG 329

Query: 298 LFTSG 302
           L   G
Sbjct: 330 LVNDG 334



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 14/211 (6%)

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           KA E +H      +   A T++ L+      GA+ +   +H  +  +G+E    + N LI
Sbjct: 2   KAMEAMHR---NRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLI 58

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           +MY +   ++ A  +F EM DRNV+SWT+MI+ ++      +AL+    ML +G++PN  
Sbjct: 59  NMYVKFGLLDEARNLFDEMPDRNVVSWTTMISAYSNSNLNHKALDFLILMLREGVRPNMY 118

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYD---EHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           TY +VL AC       +G  + R ++    + G+   +   + ++D   + G   +AL  
Sbjct: 119 TYSSVLRAC-------DGLLNLRQLHGSILKVGLESDVFVRSALIDTYSKLGEQHDALNV 171

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
              M ++ D++VW + +G    + D +   H
Sbjct: 172 FNEM-ITGDLVVWNSIIGGFAQNSDGDETLH 201


>gi|357521373|ref|XP_003630975.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524997|gb|AET05451.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 701

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 226/595 (37%), Positives = 362/595 (60%), Gaps = 15/595 (2%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+R     ++ A + L+       LH+  +R GL  D+ +  +L++ YAK    G V D 
Sbjct: 108 PNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDV 167

Query: 341 ------------RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPN 387
                       +KVFD M   +V+SW  +I G+ Q+G    EA+ +  +M + G++ P+
Sbjct: 168 FPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMY-VEALDMVREMGKNGKLKPD 226

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            FT +S+L      +D N  ++++ +AV+ G   D  +G+SLI MYA+  R+E + +AF 
Sbjct: 227 SFTLSSILPIFAEHVDVNKGKEIHGYAVRNGFDGDVFIGSSLIDMYAKCNRLECSLRAFY 286

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            L  K+ +S+N+++    +N   ++       +    V   A +F+S++   + + A+  
Sbjct: 287 ILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSL 346

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G Q+H  I++ GF+ N  I ++L+ MY++C N++ A  VF  ++ R++++WT++I G A 
Sbjct: 347 GRQLHGCIVRLGFDDNEFIASSLVDMYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAM 406

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG A  A+ +F  ML DG++P  + ++AVL+ACSHAGL+ EGW++F SM  + GI   +E
Sbjct: 407 HGHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLE 466

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMP-LSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           HYA + DLLGR+G L EA +FI +M  +     VW   L ACR H   EL +   + +L 
Sbjct: 467 HYAAVADLLGRAGRLEEAYDFISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLS 526

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
            D ++  A++L+SN+Y++A  W+  A +R  M+++ L K   CSWIE  N+VH F  G+ 
Sbjct: 527 VDSENMGAYVLMSNIYSAAQRWKDAARLRIHMRKKGLKKTPACSWIEVGNQVHTFMAGDK 586

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           SHP   +I   LD L  ++++ GY+ DTN VLH+++EE K + L  HSE++A+A+G+IST
Sbjct: 587 SHPYYDKINKALDVLLEQMEKEGYVIDTNQVLHDVDEELKRELLHNHSERLAIAYGIIST 646

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +    IRV KN+RVC DCHTAIK+I+ + GREI +RD++RFHH K+G CSC DYW
Sbjct: 647 TAGTTIRVIKNIRVCADCHTAIKFITKIVGREITVRDNSRFHHFKNGSCSCGDYW 701



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 118/459 (25%), Positives = 220/459 (47%), Gaps = 31/459 (6%)

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           +WSS+I  Y +      +   F  M  L   PN + F ++++A +  ++  + H ++   
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 207 LKCGYFDSDVCVGCALIDMFVK--------------GSVDLESAYKVFDKMTEKNTVGWT 252
           ++ G  DSD+ +  ALI+ + K              G   ++   KVFD M  ++ V W 
Sbjct: 137 VRLG-LDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWN 195

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
            +I    Q G   +A+ +  +M  +G L PD FTLS ++   +E      GK++H +A+R
Sbjct: 196 TVIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKGKEIHGYAVR 255

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            G   DV +G SL+DMYAKC     ++ S + F  +   + +SW +II G VQ+G  D+ 
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCN---RLECSLRAFYILPRKDAISWNSIIAGCVQNGEFDR- 311

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            +  F  M++  V P   +F+SV+ AC +L   ++  Q++   V+ G   ++ + +SL+ 
Sbjct: 312 GLGFFRRMLKENVKPMAVSFSSVIPACAHLTALSLGRQLHGCIVRLGFDDNEFIASSLVD 371

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYA+ G ++ AR  F+ + ++++V++  ++   A + ++  A  L   + + GV      
Sbjct: 372 MYAKCGNIKMARYVFDRIDKRDMVAWTAIIMGCAMHGHALDAVSLFENMLEDGVRPCYVA 431

Query: 492 FASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           F ++L+  S  G + +G +    +     I  G E     Y A+  +  R   +E A+  
Sbjct: 432 FMAVLTACSHAGLVDEGWRYFNSMERDFGIAPGLEH----YAAVADLLGRAGRLEEAYDF 487

Query: 547 FKEMEDRNVIS--WTSMITGFAKHGFAARALEIFYKMLA 583
              M         W+ ++     H     A ++  K+L+
Sbjct: 488 ISNMRGVQPTGSVWSILLAACRAHKSVELAEKVLDKLLS 526



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 196/386 (50%), Gaps = 28/386 (7%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+   +  LLK+    ++  L   +H+   R  L+ +  I N+LI+ Y+K  +  +   +
Sbjct: 108 PNRHVFPSLLKASTLLKHHKLAHSLHACTVRLGLDSDLYIANALINTYAKFHNAGKVFDV 167

Query: 136 FKSMGNK--------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNE 180
           F   G                RD+VSW+++I+ +   G  V+A+ M  EM + G   P+ 
Sbjct: 168 FPKRGESGIDCVKKVFDMMPVRDVVSWNTVIAGFAQNGMYVEALDMVREMGKNGKLKPDS 227

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           +  S+++   +   +V  G  I+G+ ++ G FD DV +G +LIDM+ K +  LE + + F
Sbjct: 228 FTLSSILPIFAEHVDVNKGKEIHGYAVRNG-FDGDVFIGSSLIDMYAKCN-RLECSLRAF 285

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
             +  K+ + W  +I  C Q G     +  F  M+     P   + S V+ AC+ L   +
Sbjct: 286 YILPRKDAISWNSIIAGCVQNGEFDRGLGFFRRMLKENVKPMAVSFSSVIPACAHLTALS 345

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+QLH   +R G   +  +  SLVDMYAKC   G++  +R VFDR+   ++++WTAII 
Sbjct: 346 LGRQLHGCIVRLGFDDNEFIASSLVDMYAKC---GNIKMARYVFDRIDKRDMVAWTAIIM 402

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRG 418
           G     G   +AV LF +M++  V P +  F +VL AC +  L+D       Y ++++R 
Sbjct: 403 GCAMH-GHALDAVSLFENMLEDGVRPCYVAFMAVLTACSHAGLVDEG---WRYFNSMERD 458

Query: 419 RALDDCVGN--SLISMYARSGRMEDA 442
             +   + +  ++  +  R+GR+E+A
Sbjct: 459 FGIAPGLEHYAAVADLLGRAGRLEEA 484



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/238 (21%), Positives = 108/238 (45%), Gaps = 18/238 (7%)

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           ++++++  Y  +     +F   + +    V  + + F SLL  ++ +        +HA  
Sbjct: 77  AWSSIIKCYTSHSLLHLSFSSFNSMRSLSVPPNRHVFPSLLKASTLLKHHKLAHSLHACT 136

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKE---------------MEDRNVISWTS 560
           ++ G +S+  I NALI+ Y++  N    F VF +               M  R+V+SW +
Sbjct: 137 VRLGLDSDLYIANALINTYAKFHNAGKVFDVFPKRGESGIDCVKKVFDMMPVRDVVSWNT 196

Query: 561 MITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +I GFA++G    AL++  +M  +G +KP+  T  ++L   +    +++G K        
Sbjct: 197 VIAGFAQNGMYVEALDMVREMGKNGKLKPDSFTLSSILPIFAEHVDVNKG-KEIHGYAVR 255

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           +G    +   + ++D+  +   L  +L     +P   D + W + +  C  +G+ + G
Sbjct: 256 NGFDGDVFIGSSLIDMYAKCNRLECSLRAFYILP-RKDAISWNSIIAGCVQNGEFDRG 312


>gi|356546516|ref|XP_003541672.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Glycine max]
          Length = 591

 Score =  453 bits (1165), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 224/560 (40%), Positives = 348/560 (62%), Gaps = 4/560 (0%)

Query: 303 KQLHSWAIRTGLALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           KQ+H+++IR G++L+   +G  L+  +   ++   +  +  VF  + + NV +W  II G
Sbjct: 35  KQIHAFSIRHGVSLNNPDMGKHLI--FTIVSLSAPMSYAYNVFTVIHNPNVFTWNTIIRG 92

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y +S      A   +  M+   V P+  T+  +LKA    L+    E +++  ++ G   
Sbjct: 93  YAESDN-PSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFES 151

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              V NSL+ +YA  G  E A K FE + E++LV++N+M++ +A N    +A  L  E+ 
Sbjct: 152 LVFVQNSLLHIYAACGDTESAYKVFELMKERDLVAWNSMINGFALNGRPNEALTLFREMS 211

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV    +T  SLLS ++ +GA+  G ++H  ++K G   N  + N+L+ +Y++C  + 
Sbjct: 212 VEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVTNSLLDLYAKCGAIR 271

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF EM +RN +SWTS+I G A +GF   ALE+F +M   G+ P+ IT++ VL ACS
Sbjct: 272 EAQRVFSEMSERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACS 331

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H G++ EG+++FR M +E GI+ R+EHY CMVDLL R+G + +A E+I++MP+  + ++W
Sbjct: 332 HCGMLDEGFEYFRRMKEECGIIPRIEHYGCMVDLLSRAGLVKQAYEYIQNMPVQPNAVIW 391

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           RT LGAC +HG   LG+ A   +L  +P+    ++LLSNLYAS   W  V  IR+ M + 
Sbjct: 392 RTLLGACTIHGHLGLGEIARSHLLNLEPKHSGDYVLLSNLYASERRWSDVQVIRRSMLKD 451

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + K  G S +E  N+V++F +G+ SHP++ ++YA L+++   +K  GY+P T  VL ++
Sbjct: 452 GVKKTPGYSLVELGNRVYEFTMGDRSHPQSQDVYALLEKITELLKLEGYVPHTANVLADI 511

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EEE+K Q L  HSEK+A+AF L++T    PIRV KNLRVC DCH AIK I+ +  REIV+
Sbjct: 512 EEEEKEQALSYHSEKVAIAFMLLNTPPGTPIRVMKNLRVCADCHMAIKLIAKIYDREIVI 571

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD +RFHH + G CSC DYW
Sbjct: 572 RDRSRFHHFRGGSCSCKDYW 591



 Score =  149 bits (376), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 106/387 (27%), Positives = 203/387 (52%), Gaps = 19/387 (4%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS--LISLYSKCGDLNEANKIFKSMGN 141
           LL+ C  S+  H  K +H+   R  +  N+  +    + ++ S    ++ A  +F  + N
Sbjct: 23  LLQFCASSK--HKLKQIHAFSIRHGVSLNNPDMGKHLIFTIVSLSAPMSYAYNVFTVIHN 80

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
             ++ +W+++I  Y        A   + +M+     P+ + +  +++A S + NV  G  
Sbjct: 81  P-NVFTWNTIIRGYAESDNPSPAFLFYRQMVVSCVEPDTHTYPFLLKAISKSLNVREGEA 139

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+   ++ G F+S V V  +L+ ++     D ESAYKVF+ M E++ V W  MI      
Sbjct: 140 IHSVTIRNG-FESLVFVQNSLLHIYAACG-DTESAYKVFELMKERDLVAWNSMINGFALN 197

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G P +A+ LF +M + G  PD FT+  ++SA +EL     G+++H + ++ GL+ +  V 
Sbjct: 198 GRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHVT 257

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SL+D+YAKC   G++ ++++VF  M + N +SWT++I G +   G  +EA++LF +M  
Sbjct: 258 NSLLDLYAKC---GAIREAQRVFSEMSERNAVSWTSLIVG-LAVNGFGEEALELFKEMEG 313

Query: 382 GQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSG 437
             + P+  TF  VL AC +  +LD       Y   +K    +   + +   ++ + +R+G
Sbjct: 314 QGLVPSEITFVGVLYACSHCGMLDEGFE---YFRRMKEECGIIPRIEHYGCMVDLLSRAG 370

Query: 438 RMEDARKAFESL-FEKNLVSYNTMVDA 463
            ++ A +  +++  + N V + T++ A
Sbjct: 371 LVKQAYEYIQNMPVQPNAVIWRTLLGA 397



 Score =  129 bits (325), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 73/227 (32%), Positives = 123/227 (54%), Gaps = 3/227 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  LLK+  +S N   G+ +HS+  R+  E    + NSL+ +Y+ CGD   A K+
Sbjct: 116 PDTHTYPFLLKAISKSLNVREGEAIHSVTIRNGFESLVFVQNSLLHIYAACGDTESAYKV 175

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ M  +RD+V+W+SMI+ +   G+  +A+ +F EM   G  P+ +   +++ A +    
Sbjct: 176 FELM-KERDLVAWNSMINGFALNGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGA 234

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +G  ++ +LLK G    +  V  +L+D++ K    +  A +VF +M+E+N V WT +I
Sbjct: 235 LELGRRVHVYLLKVG-LSKNSHVTNSLLDLYAKCGA-IREAQRVFSEMSERNAVSWTSLI 292

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
                 G   +A+ LF +M   G +P   T  GV+ ACS   +   G
Sbjct: 293 VGLAVNGFGEEALELFKEMEGQGLVPSEITFVGVLYACSHCGMLDEG 339



 Score = 94.4 bits (233), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 64/209 (30%), Positives = 104/209 (49%), Gaps = 5/209 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +GR  +A+     M+ +G  PD  T   LL +        LG+ VH  L +  L  NS +
Sbjct: 197 NGRPNEALTLFREMSVEGVEPDGFTVVSLLSASAELGALELGRRVHVYLLKVGLSKNSHV 256

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            NSL+ LY+KCG + EA ++F  M ++R+ VSW+S+I      G   +A+ +F EM   G
Sbjct: 257 TNSLLDLYAKCGAIREAQRVFSEM-SERNAVSWTSLIVGLAVNGFGEEALELFKEMEGQG 315

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-KCGYFDSDVCVGCALIDMFVKGSVDLE 234
             P+E  F  V+ ACS+   +  G   +  +  +CG        GC ++D+  +  + ++
Sbjct: 316 LVPSEITFVGVLYACSHCGMLDEGFEYFRRMKEECGIIPRIEHYGC-MVDLLSRAGL-VK 373

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
            AY+    M  + N V W  ++  CT  G
Sbjct: 374 QAYEYIQNMPVQPNAVIWRTLLGACTIHG 402


>gi|356506884|ref|XP_003522204.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 752

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 236/657 (35%), Positives = 393/657 (59%), Gaps = 8/657 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N + LNS +    K G L ++  +F  M   RD +SW+++I+ YVN     +A+ +F  M
Sbjct: 89  NMLELNSELKQLVKQGQLCKSRYMFDKM-THRDEISWTTLIAGYVNASDSYEALILFSNM 147

Query: 172 -LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            ++ G   +++  S  ++AC    N+  G +++GF +K G  +S V V  ALIDM++K  
Sbjct: 148 WVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINS-VFVSSALIDMYMKVG 206

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +E   +VF KMT++N V WT +I      G   +A+  F +M +S    D  T +  +
Sbjct: 207 -KIEQGCRVFKKMTKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIAL 265

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            A ++  L   GK +H+  I+ G      V  +L  MY KC   G  D   ++F++M   
Sbjct: 266 KASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKC---GKADYVMRLFEKMKMP 322

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V+SWT +IT YVQ G  ++ AV+ F  M +  V+PN +TFA+V+ AC NL  +   EQ+
Sbjct: 323 DVVSWTTLITTYVQKG-EEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQI 381

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + H ++ G      V NS++++Y++SG ++ A   F  +  K+++S++T++  Y++   +
Sbjct: 382 HGHVLRLGLVDALSVANSIVTLYSKSGLLKSASLVFHGITRKDIISWSTIIAVYSQGGYA 441

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           ++AF+ L  +   G   + +  +S+LS   S+  + +G+Q+HA ++  G +    +++AL
Sbjct: 442 KEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVHSAL 501

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           ISMYS+C +VE A ++F  M+  N+ISWT+MI G+A+HG++  A+ +F K+ + G+KP+ 
Sbjct: 502 ISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDY 561

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T+I VL+ACSHAG++  G+ +F  M +E+ I    EHY C++DLL R+G L+EA   IR
Sbjct: 562 VTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAEHMIR 621

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           SMP   D +VW T L +CRVHGD + G+  AE +L  DP     HI L+N+YA+ G W+ 
Sbjct: 622 SMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLRLDPNSAGTHIALANIYAAKGRWKE 681

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
            A+IRK MK + +IKE G SW+  ++K++ F  G+ +HP++  I   L+ L+  I +
Sbjct: 682 AAHIRKLMKSKGVIKERGWSWVNVNDKLNAFVAGDQAHPQSEHITTVLELLSANIGD 738



 Score =  210 bits (534), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 154/562 (27%), Positives = 272/562 (48%), Gaps = 15/562 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++  Q G   D    S+ LK+C    N   G+L+H    +S L  +  + ++LI +Y K 
Sbjct: 146 NMWVQPGLQRDQFMISVALKACGLGVNICFGELLHGFSVKSGLINSVFVSSALIDMYMKV 205

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G + +  ++FK M  KR++VSW+++I+  V+ G  ++A+  F EM       + + F+  
Sbjct: 206 GKIEQGCRVFKKM-TKRNVVSWTAIIAGLVHAGYNMEALLYFSEMWISKVGYDSHTFAIA 264

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
           ++A +++  +  G  I+   +K G FD    V   L  M+ K G  D     ++F+KM  
Sbjct: 265 LKASADSSLLHHGKAIHTQTIKQG-FDESSFVINTLATMYNKCGKADY--VMRLFEKMKM 321

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            + V WT +IT   Q G    A+  F  M  S   P+++T + V+SAC+ L +   G+Q+
Sbjct: 322 PDVVSWTTLITTYVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQI 381

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H   +R GL   + V  S+V +Y+K    G +  +  VF  +   +++SW+ II  Y Q 
Sbjct: 382 HGHVLRLGLVDALSVANSIVTLYSK---SGLLKSASLVFHGITRKDIISWSTIIAVYSQ- 437

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           GG  KEA    S M +    PN F  +SVL  CG++      +QV+ H +  G   +  V
Sbjct: 438 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMV 497

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            ++LISMY++ G +E+A K F  +   N++S+  M++ YA++  S++A  L  +I   G+
Sbjct: 498 HSALISMYSKCGSVEEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGL 557

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAF 544
                TF  +L+  S  G +  G      +        +   Y  +I +  R   +  A 
Sbjct: 558 KPDYVTFIGVLTACSHAGMVDLGFYYFMLMTNEYQISPSKEHYGCIIDLLCRAGRLSEAE 617

Query: 545 QVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLSACSH 602
            + + M    + + W++++     HG   R      ++L   + PN   T+IA+ +  + 
Sbjct: 618 HMIRSMPCYTDDVVWSTLLRSCRVHGDVDRGRWTAEQLLR--LDPNSAGTHIALANIYAA 675

Query: 603 AGLISEGWKHFRSMYDEHGIVQ 624
            G   E   H R +    G+++
Sbjct: 676 KGRWKEA-AHIRKLMKSKGVIK 696



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 74/243 (30%), Positives = 121/243 (49%), Gaps = 5/243 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G  + A+     M +    P+  T++ ++ +C        G+ +H  + R  L   
Sbjct: 334 YVQKGEEEHAVEAFKRMRKSNVSPNKYTFAAVISACANLAIAKWGEQIHGHVLRLGLVDA 393

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + NS+++LYSK G L  A+ +F  +  ++DI+SWS++I+ Y   G   +A      M 
Sbjct: 394 LSVANSIVTLYSKSGLLKSASLVFHGI-TRKDIISWSTIIAVYSQGGYAKEAFDYLSWMR 452

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
             G  PNE+  S+V+  C +   +  G  ++  +L C   D +  V  ALI M+ K GSV
Sbjct: 453 REGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVL-CIGIDHEAMVHSALISMYSKCGSV 511

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
             E A K+F+ M   N + WT MI    + G  ++AI LF  +   G  PD  T  GV++
Sbjct: 512 --EEASKIFNGMKINNIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVTFIGVLT 569

Query: 292 ACS 294
           ACS
Sbjct: 570 ACS 572



 Score = 85.9 bits (211), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 103/205 (50%), Gaps = 7/205 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A   L  M ++G  P+    S +L  C        GK VH+ +    ++  +++ 
Sbjct: 439 GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHVLCIGIDHEAMVH 498

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++LIS+YSKCG + EA+KIF  M    +I+SW++MI+ Y   G   +AI++F ++  +G 
Sbjct: 499 SALISMYSKCGSVEEASKIFNGM-KINNIISWTAMINGYAEHGYSQEAINLFEKISSVGL 557

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD---SDVCVGCALIDMFVKGSVDL 233
            P+   F  V+ ACS+   V +G   Y F+L    +    S    GC +ID+  +     
Sbjct: 558 KPDYVTFIGVLTACSHAGMVDLG--FYYFMLMTNEYQISPSKEHYGC-IIDLLCRAGRLS 614

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRC 258
           E+ + +       + V W+ ++  C
Sbjct: 615 EAEHMIRSMPCYTDDVVWSTLLRSC 639


>gi|356561464|ref|XP_003549001.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Glycine max]
          Length = 673

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 244/626 (38%), Positives = 360/626 (57%), Gaps = 38/626 (6%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD + E+N + + +MI          DA+ +F DM+  GF PD +T   V+ ACS 
Sbjct: 86  ARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSC 145

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
            +    G QLH    + GL L++ VG  L+ +Y KC   G + ++R V D M   +V+SW
Sbjct: 146 SDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKC---GCLPEARCVLDEMQSKDVVSW 202

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            +++ GY Q+   D +A+ +  +M   +  P+  T AS+L A  N    NV         
Sbjct: 203 NSMVAGYAQNMQFD-DALDICREMDGVRQKPDACTMASLLPAVTNTSSENV--------- 252

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
                           +Y          + F +L +K+LVS+N M+  Y KN    K+ +
Sbjct: 253 ----------------LYVE--------EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVD 288

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  ++    V   A T AS+L     + A+  G +IH  + +     N  + N+LI MY+
Sbjct: 289 LYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYA 348

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           RC  +E A +VF  M+ R+V SWTS+I+ +   G    A+ +F +M   G  P+ I ++A
Sbjct: 349 RCGCLEDAKRVFDRMKFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSIAFVA 408

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LSACSH+GL++EG  +F+ M D++ I   +EH+AC+VDLLGRSG + EA   I+ MP+ 
Sbjct: 409 ILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMK 468

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            +  VW   L +CRV+ + ++G  AA+ +L+  P++   ++LLSN+YA AG W  V  IR
Sbjct: 469 PNERVWGALLSSCRVYSNMDIGILAADKLLQLAPEESGYYVLLSNIYAKAGRWTEVTAIR 528

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             MK R + K  G S +E +N+VH F  G+T HP++ EIY EL  L  K+KE GY+P T+
Sbjct: 529 SLMKRRRIRKMPGISNVELNNQVHTFLAGDTYHPQSKEIYEELSVLVGKMKELGYVPKTD 588

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
             LH++EEE K  +L  HSEK+A+ F +++T +S PIR+ KNLRVCGDCH A K IS + 
Sbjct: 589 SALHDVEEEDKECHLAVHSEKLAIVFAILNTQES-PIRITKNLRVCGDCHIAAKLISKIV 647

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            REIV+RD+NRFHH KDG CSC DYW
Sbjct: 648 QREIVIRDTNRFHHFKDGICSCGDYW 673



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 194/396 (48%), Gaps = 51/396 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+     A+     M   G  PD  TY  +LK+C  S N  +G  +H  + +  L+ N
Sbjct: 108 YMNNHLYDDALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLN 167

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N LI+LY KCG L EA  +   M +K D+VSW+SM++ Y    +  DA+ +  EM 
Sbjct: 168 LFVGNGLIALYGKCGCLPEARCVLDEMQSK-DVVSWNSMVAGYAQNMQFDDALDICREMD 226

Query: 173 ELGFCPNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            +   P+    ++++ A +NT  ENV                            ++V+  
Sbjct: 227 GVRQKPDACTMASLLPAVTNTSSENV----------------------------LYVE-- 256

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                  ++F  + +K+ V W +MI+   +   P  ++ L+L M      PD  T + V+
Sbjct: 257 -------EMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVL 309

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC +L     G+++H +  R  L  ++ +  SL+DMYA+C   G ++D+++VFDRM   
Sbjct: 310 RACGDLSALLLGRRIHEYVERKKLCPNMLLENSLIDMYARC---GCLEDAKRVFDRMKFR 366

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAE 408
           +V SWT++I+ Y  + G+   AV LF++M     +P+   F ++L AC +  LL+     
Sbjct: 367 DVASWTSLISAYGMT-GQGYNAVALFTEMQNSGQSPDSIAFVAILSACSHSGLLNEG--- 422

Query: 409 QVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDA 442
           + Y   +     +   + +   L+ +  RSGR+++A
Sbjct: 423 KFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEA 458



 Score =  131 bits (330), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 180/402 (44%), Gaps = 47/402 (11%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K +HS         +  +G  L+  YA     G    +R VFD + + NV+ +  +I  Y
Sbjct: 52  KNVHSKVFNLSFHENPSLGIKLMRAYA---ARGEPGLARNVFDVIPERNVIFYNVMIRSY 108

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           + +   D +A+ +F DM+ G  +P+H+T+  VLKAC    +  +  Q++    K G  L+
Sbjct: 109 MNNHLYD-DALLVFRDMVSGGFSPDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLN 167

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             VGN LI++Y + G + +AR   + +  K++VS+N+MV  YA+N+  + A ++  E++ 
Sbjct: 168 LFVGNGLIALYGKCGCLPEARCVLDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREMDG 227

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
                 A T ASLL   ++  +                                  NV  
Sbjct: 228 VRQKPDACTMASLLPAVTNTSS---------------------------------ENVLY 254

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
             ++F  +E ++++SW  MI+ + K+    ++++++ +M    ++P+ IT  +VL AC  
Sbjct: 255 VEEMFMNLEKKSLVSWNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDAITCASVLRACGD 314

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
              +  G +      +   +   M     ++D+  R G L +A      M    DV  W 
Sbjct: 315 LSALLLG-RRIHEYVERKKLCPNMLLENSLIDMYARCGCLEDAKRVFDRMKFR-DVASWT 372

Query: 663 TFLGACRVHGDTELGKHAAEMILE-----QDPQDPAAHILLS 699
           + + A   +G T  G +A  +  E     Q P   A   +LS
Sbjct: 373 SLISA---YGMTGQGYNAVALFTEMQNSGQSPDSIAFVAILS 411



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 207/492 (42%), Gaps = 77/492 (15%)

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDS--------NVAEQVYTHAVKRGRALDDCVG 426
           L S + +  V+P +     VL+  G +LD         NV  +V+  +     +L    G
Sbjct: 17  LVSSIRKSLVSPQNPVL--VLELLGKVLDQYPDIKTLKNVHSKVFNLSFHENPSL----G 70

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
             L+  YA  G    AR  F+ + E+N++ YN M+ +Y  N   + A  +  ++   G  
Sbjct: 71  IKLMRAYAARGEPGLARNVFDVIPERNVIFYNVMIRSYMNNHLYDDALLVFRDMVSGGFS 130

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              YT+  +L   S    +  G Q+H  + K G + N  + N LI++Y +C  +  A  V
Sbjct: 131 PDHYTYPCVLKACSCSDNLRIGLQLHGAVFKVGLDLNLFVGNGLIALYGKCGCLPEARCV 190

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI--KPNGITYIAVLSACSHAG 604
             EM+ ++V+SW SM+ G+A++     AL+I  +M  DG+  KP+  T  ++L A ++  
Sbjct: 191 LDEMQSKDVVSWNSMVAGYAQNMQFDDALDICREM--DGVRQKPDACTMASLLPAVTNTS 248

Query: 605 LISEGWKHFRSMY---DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM---PLSADV 658
             SE   +   M+   ++  +V     +  M+ +  ++    ++++    M    +  D 
Sbjct: 249 --SENVLYVEEMFMNLEKKSLVS----WNVMISVYMKNSMPGKSVDLYLQMGKCEVEPDA 302

Query: 659 LVWRTFLGAC----------RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           +   + L AC          R+H   E  K    M+LE           L ++YA  G  
Sbjct: 303 ITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENS---------LIDMYARCGCL 353

Query: 709 EYVANIRKRMKERN------LIKEAGCSWIEADNKVHKFHVGETS--HPKTLEIYAELDQ 760
           E    +  RMK R+      LI   G +  +  N V  F   + S   P ++   A L  
Sbjct: 354 EDAKRVFDRMKFRDVASWTSLISAYGMTG-QGYNAVALFTEMQNSGQSPDSIAFVAILSA 412

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH----------SEKIAVAFGLISTSKSK 810
            +      G L +  F   ++ ++ K+  + +H          S ++  A+ +I     K
Sbjct: 413 CS----HSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVDEAYNIIKQMPMK 468

Query: 811 PIRVFKNLRVCG 822
           P     N RV G
Sbjct: 469 P-----NERVWG 475



 Score = 93.6 bits (231), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 61/199 (30%), Positives = 103/199 (51%), Gaps = 8/199 (4%)

Query: 65  TLDLMTQKGN---HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           ++DL  Q G     PD  T + +L++C       LG+ +H  + R KL PN ++ NSLI 
Sbjct: 286 SVDLYLQMGKCEVEPDAITCASVLRACGDLSALLLGRRIHEYVERKKLCPNMLLENSLID 345

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y++CG L +A ++F  M   RD+ SW+S+IS+Y   G+  +A+ +F EM   G  P+  
Sbjct: 346 MYARCGCLEDAKRVFDRM-KFRDVASWTSLISAYGMTGQGYNAVALFTEMQNSGQSPDSI 404

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
            F A++ ACS++  +  G   +  +         +     L+D+  + G VD   AY + 
Sbjct: 405 AFVAILSACSHSGLLNEGKFYFKQMTDDYKITPIIEHFACLVDLLGRSGRVD--EAYNII 462

Query: 241 DKMTEK-NTVGWTLMITRC 258
            +M  K N   W  +++ C
Sbjct: 463 KQMPMKPNERVWGALLSSC 481


>gi|297851096|ref|XP_002893429.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297339271|gb|EFH69688.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 790

 Score =  452 bits (1164), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 246/703 (34%), Positives = 384/703 (54%), Gaps = 74/703 (10%)

Query: 229 GSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            S D+  A  VF++  ++ ++TV +  MIT  +       AI LF  M   GF PD FT 
Sbjct: 92  ASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTY 151

Query: 287 SGVVSACSELELFTSGK----QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV-DDSR 341
           + V++    L L    +    Q H+ A+++G      V  +LV +Y++C    S+   +R
Sbjct: 152 ASVLAG---LALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCASSPSLLHSAR 208

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSG-------------------------------GRDK 370
           KVFD + + +  SWT ++TGYV++G                               G  +
Sbjct: 209 KVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQ 268

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+++   M+   +  + FT+ SV++AC N     + +QV+ + ++R         NSL+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRR-EDFSFHFDNSLV 327

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY-------------------------- 464
           ++Y + G+  +AR  FE +  K+LVS+N ++  Y                          
Sbjct: 328 TLYYKCGKFNEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387

Query: 465 -----AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
                A+N   E+  +L   ++  G     Y F+  +   + +GA   G+Q HA+++K G
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIG 447

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F+S+    NALI+MY++C  VE A QVF+ M   + +SW ++I    +HG    A++++ 
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEAQQVFRTMPCLDSVSWNALIAALGQHGHGVEAVDVYE 507

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +ML  GI+P+ IT++ VL+ACSHAGL+ +G K+F SM   + I    +HYA ++DLL RS
Sbjct: 508 EMLKKGIRPDRITFLTVLTACSHAGLVDQGRKYFNSMETVYRIPPGADHYARLIDLLCRS 567

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G  +EA   I S+P      +W   L  CRVHG+ ELG  AA+ +    P+    ++LLS
Sbjct: 568 GKFSEAESIIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLS 627

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA+ G WE VA +RK M++R + KE  CSWIE + +VH F V +TSHP+   +Y  L 
Sbjct: 628 NMYAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYKYLQ 687

Query: 760 QLALKIKEFGYLPDTNFVLHELEEE-QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
            L  +++  GY+PDT+FVLH++E +  K   L  HSEKIAVAFGL+       IR+FKNL
Sbjct: 688 DLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNL 747

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R CGDCH   +++S V  R+I+LRD  RFHH ++G+CSC ++W
Sbjct: 748 RTCGDCHNFFRFLSKVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 142/608 (23%), Positives = 259/608 (42%), Gaps = 124/608 (20%)

Query: 75  HPDL-----DTYSLLLKSCI--RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +PDL     + Y+  L+ C+  R  +  L + VH  +     +P++ ILN LI +Y K  
Sbjct: 4   NPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPHAHILNRLIDVYCKSS 63

Query: 128 DLNEANKIFKSMGNK--------------------------------RDIVSWSSMISSY 155
           +L+ A ++F  +                                   RD V +++MI+ +
Sbjct: 64  ELDYARQLFDEISEPDKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGF 123

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS---NTENVAIGHIIYGFLLKCGYF 212
            +      AI++F +M   GF P+++ +++V+   +   + E   +           GY 
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYV 183

Query: 213 DSDVCVGCALIDMFVKGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQLGC------ 263
            S   V  AL+ ++ + +     L SA KVFD + EK+   WT M+T   + GC      
Sbjct: 184 TS---VSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKE 240

Query: 264 --------------------------PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
                                      ++A+ +   M+ SG   D FT   V+ AC+   
Sbjct: 241 LLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANAR 300

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           L   GKQ+H++ +R           SLV +Y KC   G  +++R +F++M   +++SW A
Sbjct: 301 LLQLGKQVHAYVLRRE-DFSFHFDNSLVTLYYKC---GKFNEARAIFEKMPAKDLVSWNA 356

Query: 358 IITGYVQSG------------------------------GRDKEAVKLFSDMIQGQVAPN 387
           +++GYV SG                              G  +E +KLFS M +    P 
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            + F+  +K+C  L      +Q +   VK G       GN+LI+MYA+ G +E+A++ F 
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKCGVVEEAQQVFR 476

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
           ++   + VS+N ++ A  ++ +  +A ++  E+   G+     TF ++L+  S  G + +
Sbjct: 477 TMPCLDSVSWNALIAALGQHGHGVEAVDVYEEMLKKGIRPDRITFLTVLTACSHAGLVDQ 536

Query: 508 GEQIHARI-----IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSM 561
           G +    +     I  G  ++H  Y  LI +  R      A  + + +  +     W ++
Sbjct: 537 GRKYFNSMETVYRIPPG--ADH--YARLIDLLCRSGKFSEAESIIESLPFKPTAEIWEAL 592

Query: 562 ITGFAKHG 569
           ++G   HG
Sbjct: 593 LSGCRVHG 600



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 208/473 (43%), Gaps = 93/473 (19%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLL----------KSCIRSRNFHLGKLVHS 102
           H NDG    AI     M  +G  PD  TY+ +L          K C++   FH   L   
Sbjct: 125 HNNDG--YSAINLFCKMKHEGFKPDDFTYASVLAGLALVVDDEKQCVQ---FHAAAL--- 176

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGD----LNEANKIF---------------------- 136
              +S     + + N+L+S+YS+C      L+ A K+F                      
Sbjct: 177 ---KSGAGYVTSVSNALVSVYSRCASSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNG 233

Query: 137 ---------KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
                    K M     +V++++MIS YVN G   +A+ M   M+  G   +E+ + +VI
Sbjct: 234 CFDLGKELLKGMDENMKLVAYNAMISGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVI 293

Query: 188 RACSNTENVAIGHIIYGFLL------------------KCGYFDS-----------DVCV 218
           RAC+N   + +G  ++ ++L                  KCG F+            D+  
Sbjct: 294 RACANARLLQLGKQVHAYVLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMPAKDLVS 353

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             AL+  +V  S  +  A  +F +M EKN + W +MI+   + G   + ++LF  M   G
Sbjct: 354 WNALLSGYVS-SGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREG 412

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           F P  +  SG + +C+ L  + +G+Q H+  ++ G    +  G +L+ MYAKC   G V+
Sbjct: 413 FEPCDYAFSGAIKSCAVLGAYCNGQQFHAQLVKIGFDSSLSAGNALITMYAKC---GVVE 469

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           ++++VF  M   + +SW A+I    Q  G   EAV ++ +M++  + P+  TF +VL AC
Sbjct: 470 EAQQVFRTMPCLDSVSWNALIAALGQH-GHGVEAVDVYEEMLKKGIRPDRITFLTVLTAC 528

Query: 399 --GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
               L+D           V R     D     LI +  RSG+  +A    ESL
Sbjct: 529 SHAGLVDQGRKYFNSMETVYRIPPGADHYAR-LIDLLCRSGKFSEAESIIESL 580



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 89/355 (25%), Positives = 150/355 (42%), Gaps = 91/355 (25%)

Query: 422 DDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           D     +++S Y  SG +  AR  FE   +  ++ V YN M+  ++ N +   A  L  +
Sbjct: 79  DKIARTTMVSGYCASGDIALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 480 IEDTGVGTSAYTFASLLSG-ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++  G     +T+AS+L+G A  +    +  Q HA  +KSG      + NAL+S+YSRCA
Sbjct: 139 MKHEGFKPDDFTYASVLAGLALVVDDEKQCVQFHAAALKSGAGYVTSVSNALVSVYSRCA 198

Query: 539 N----VEAAFQVFKEMEDRNVISWTSMITGFAKH-------------------------- 568
           +    + +A +VF ++ +++  SWT+M+TG+ K+                          
Sbjct: 199 SSPSLLHSARKVFDDIPEKDERSWTTMMTGYVKNGCFDLGKELLKGMDENMKLVAYNAMI 258

Query: 569 ------GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
                 G    ALE+  +M++ GI+ +  TY +V+ AC++A L+  G +        H  
Sbjct: 259 SGYVNCGLYQEALEMVRRMVSSGIELDEFTYPSVIRACANARLLQLGKQ-------VHAY 311

Query: 623 VQRMEHYA-----CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           V R E ++      +V L  + G   EA      MP + D++ W   L            
Sbjct: 312 VLRREDFSFHFDNSLVTLYYKCGKFNEARAIFEKMP-AKDLVSWNALLSG---------- 360

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
                                   Y S+GH      I K MKE+N++     SW+
Sbjct: 361 ------------------------YVSSGHIGEAKLIFKEMKEKNIL-----SWM 386



 Score = 52.4 bits (124), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 129/309 (41%), Gaps = 59/309 (19%)

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED------------------ 552
           +H  II  GF+ +  I N LI +Y + + ++ A Q+F E+ +                  
Sbjct: 36  VHGNIITFGFQPHAHILNRLIDVYCKSSELDYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 553 ---------------RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
                          R+ + + +MITGF+ +     A+ +F KM  +G KP+  TY +VL
Sbjct: 96  IALARSVFEETPVSMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDDFTYASVL 155

Query: 598 SACSHAGLISEGWK-----HFRSMYDEHGIVQRMEHYACMVDLLGRSGS----LTEALEF 648
           +  +   L+ +  K     H  ++    G V  + +   +V +  R  S    L  A + 
Sbjct: 156 AGLA---LVVDDEKQCVQFHAAALKSGAGYVTSVSN--ALVSVYSRCASSPSLLHSARKV 210

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
              +P   D   W T +     +G  +LGK   +  ++++ +  A + ++S  Y + G +
Sbjct: 211 FDDIP-EKDERSWTTMMTGYVKNGCFDLGKELLKG-MDENMKLVAYNAMISG-YVNCGLY 267

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           +    + +RM           S IE D   +   +   ++ + L++  ++    L+ ++F
Sbjct: 268 QEALEMVRRMVS---------SGIELDEFTYPSVIRACANARLLQLGKQVHAYVLRREDF 318

Query: 769 GYLPDTNFV 777
            +  D + V
Sbjct: 319 SFHFDNSLV 327


>gi|297740904|emb|CBI31086.3| unnamed protein product [Vitis vinifera]
          Length = 766

 Score =  452 bits (1163), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/719 (34%), Positives = 416/719 (57%), Gaps = 14/719 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L++C        G+  H+ +  + +  N ++   L+ +Y  CG   +A  IF  +   R
Sbjct: 52  ILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLCGAFLDAKNIFYQL---R 108

Query: 144 DIVS--WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
              S  W+ MI  +   G+   A+  + +ML  G  P++Y F  VI+AC    +VA+G +
Sbjct: 109 LWCSEPWNWMIRGFTMMGQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRV 168

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++  +   G F+ DV VG +LI  + +     ++ Y +FD+M  K+ V W +M+    + 
Sbjct: 169 VHDKIQFMG-FELDVFVGSSLIKFYSENGCIHDARY-LFDRMPSKDGVLWNVMLNGYVKN 226

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   +A  +F++M  +   P+  T + V+S C+   +   G QLH   + +GL +D  V 
Sbjct: 227 GDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVA 286

Query: 322 --CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
              +L+D+Y KC     V+ +RK+FD+    +++  TA+I+GYV +G  +  A+++F  +
Sbjct: 287 NTFALIDIYFKCR---DVEMARKIFDQRTPVDIVVCTAMISGYVLNG-MNNNALEIFRWL 342

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           +Q ++  N  T ASVL AC  L    + ++++ H +K G      VG++++ MYA+ GR+
Sbjct: 343 LQERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKCGRL 402

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + A + F  + +K+ V +N+M+ + ++N   E+A +L  ++   G      + ++ LS  
Sbjct: 403 DLAHQTFIGISDKDAVCWNSMITSCSQNGKPEEAIDLFRQMGMAGTKYDCVSISAALSAC 462

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +++ A+  G++IHA +++  F S+    +ALI MYS+C N++ A +VF  ME++N +SW 
Sbjct: 463 ANLPALHYGKEIHAFMMRGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWN 522

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           S+I  +  HG    +L +F+ ML DGI+P+ +T++A++SAC HAG + EG  +FR M +E
Sbjct: 523 SIIAAYGNHGRLKDSLNLFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEE 582

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            GI+ RMEHYACMVDL GR+G L EA   I SMP S D  VW T LGACR+HG+ EL + 
Sbjct: 583 LGIMARMEHYACMVDLFGRAGRLNEAFGMINSMPFSPDAGVWGTLLGACRLHGNVELAEV 642

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           A+  + + DPQ+   ++LLSN++A+AG WE V  IR  MKER + K  GCSWI+ +N  H
Sbjct: 643 ASRNLFDLDPQNSGYYVLLSNVHANAGQWESVLKIRSLMKERGVQKVPGCSWIDVNNTTH 702

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH-ELEEEQKVQYLFQHSEKI 797
            F   + SHP++ +IY  L  L L++++ GY+P     +H +       +  + HS KI
Sbjct: 703 MFVAADRSHPQSSQIYLLLKNLFLELRKEGYVPQLYLPMHPQTMGLHNGRISYYHSSKI 761



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 152/571 (26%), Positives = 273/571 (47%), Gaps = 15/571 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+   A+     M   G  PD  T+  ++K+C    +  LG++VH  +     E +  + 
Sbjct: 126 GQFDFALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVALGRVVHDKIQFMGFELDVFVG 185

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SLI  YS+ G +++A  +F  M +K D V W+ M++ YV  G   +A  +F+EM     
Sbjct: 186 SSLIKFYSENGCIHDARYLFDRMPSK-DGVLWNVMLNGYVKNGDWDNATGVFMEMRRTET 244

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLES 235
            PN   F+ V+  C++   +  G  ++G ++  G   DS V    ALID++ K   D+E 
Sbjct: 245 NPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSPVANTFALIDIYFK-CRDVEM 303

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A K+FD+ T  + V  T MI+     G   +A+ +F  ++      +  TL+ V+ AC+ 
Sbjct: 304 ARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQERMRANSVTLASVLPACAG 363

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L   T GK+LH   ++ G      VG +++DMYAKC   G +D + + F  + D + + W
Sbjct: 364 LAALTLGKELHGHILKNGHGGSCYVGSAIMDMYAKC---GRLDLAHQTFIGISDKDAVCW 420

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            ++IT   Q+ G+ +EA+ LF  M       +  + ++ L AC NL   +  ++++   +
Sbjct: 421 NSMITSCSQN-GKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMM 479

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           +     D    ++LI MY++ G ++ A + F+++ EKN VS+N+++ AY  +   + +  
Sbjct: 480 RGAFRSDLFAESALIDMYSKCGNLDLACRVFDTMEEKNEVSWNSIIAAYGNHGRLKDSLN 539

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMY 534
           L H +   G+     TF +++S     G + +G      + +  G  +    Y  ++ ++
Sbjct: 540 LFHGMLGDGIQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYACMVDLF 599

Query: 535 SRCANVEAAFQVFKEM---EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            R   +  AF +   M    D  V  W +++     HG    A E+  + L D + P   
Sbjct: 600 GRAGRLNEAFGMINSMPFSPDAGV--WGTLLGACRLHGNVELA-EVASRNLFD-LDPQNS 655

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            Y  +LS         E     RS+  E G+
Sbjct: 656 GYYVLLSNVHANAGQWESVLKIRSLMKERGV 686



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 108/393 (27%), Positives = 197/393 (50%), Gaps = 10/393 (2%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L  ++  C++    + G+Q H+  +  G+  +  +G  L+ MY  C   G+  D++ +F 
Sbjct: 49  LVSILQTCTDPSGLSQGRQAHAQMLVNGIGYNGILGTKLLGMYVLC---GAFLDAKNIFY 105

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           ++       W  +I G+   G  D  A+  +  M+     P+ +TF  V+KACG L    
Sbjct: 106 QLRLWCSEPWNWMIRGFTMMGQFDF-ALLFYFKMLGCGTLPDKYTFPYVIKACGGLNSVA 164

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           +   V+      G  LD  VG+SLI  Y+ +G + DAR  F+ +  K+ V +N M++ Y 
Sbjct: 165 LGRVVHDKIQFMGFELDVFVGSSLIKFYSENGCIHDARYLFDRMPSKDGVLWNVMLNGYV 224

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           KN + + A  +  E+  T    ++ TFA +LS  +S   I  G Q+H  ++ SG E +  
Sbjct: 225 KNGDWDNATGVFMEMRRTETNPNSVTFACVLSVCASEIMINFGSQLHGLVVSSGLEMDSP 284

Query: 526 IYN--ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
           + N  ALI +Y +C +VE A ++F +    +++  T+MI+G+  +G    ALEIF  +L 
Sbjct: 285 VANTFALIDIYFKCRDVEMARKIFDQRTPVDIVVCTAMISGYVLNGMNNNALEIFRWLLQ 344

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
           + ++ N +T  +VL AC+    ++ G + H   + + HG    +   + ++D+  + G L
Sbjct: 345 ERMRANSVTLASVLPACAGLAALTLGKELHGHILKNGHGGSCYVG--SAIMDMYAKCGRL 402

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
             A +    +    D + W + + +C  +G  E
Sbjct: 403 DLAHQTFIGIS-DKDAVCWNSMITSCSQNGKPE 434



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/205 (28%), Positives = 99/205 (48%), Gaps = 5/205 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+ ++AI     M   G   D  + S  L +C      H GK +H+ + R     +   
Sbjct: 430 NGKPEEAIDLFRQMGMAGTKYDCVSISAALSACANLPALHYGKEIHAFMMRGAFRSDLFA 489

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++LI +YSKCG+L+ A ++F +M  K + VSW+S+I++Y N G+  D++++F  ML  G
Sbjct: 490 ESALIDMYSKCGNLDLACRVFDTMEEKNE-VSWNSIIAAYGNHGRLKDSLNLFHGMLGDG 548

Query: 176 FCPNEYCFSAVIRACSNTENVAIG-HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
             P+   F A+I AC +   V  G H       + G         C ++D+F +    L 
Sbjct: 549 IQPDHVTFLAIISACGHAGQVDEGIHYFRCMTEELGIMARMEHYAC-MVDLFGRAG-RLN 606

Query: 235 SAYKVFDKMTEKNTVG-WTLMITRC 258
            A+ + + M      G W  ++  C
Sbjct: 607 EAFGMINSMPFSPDAGVWGTLLGAC 631


>gi|224079057|ref|XP_002305733.1| predicted protein [Populus trichocarpa]
 gi|222848697|gb|EEE86244.1| predicted protein [Populus trichocarpa]
          Length = 571

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 227/575 (39%), Positives = 344/575 (59%), Gaps = 9/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++ AC+     + G+ +H   ++  +        +L+DMYAKC   G +D +  VFD M 
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKC---GVLDGAILVFDLMS 60

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
              V++WT++I  Y + G  D EA++LF +M +  V+P+ FT  +VL AC         +
Sbjct: 61  VRTVVTWTSLIAAYAREGLSD-EAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK 119

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+ +  +     +  V N+L+ MYA+ G MEDA   F  +  K+++S+NTM+  Y+KN 
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVKDIISWNTMIGGYSKNS 179

Query: 469 NSEKAFELLHE--IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
              +A  L  +  +E    GT   T A +L   +S+ ++ +G+++H  I+++GF S+  +
Sbjct: 180 LPNEALSLFGDMVLEMKPDGT---TLACILPACASLASLDRGKEVHGHILRNGFFSDQQV 236

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            NAL+ MY +C     A  +F  +  +++I+WT MI G+  HGF   A+  F +M   GI
Sbjct: 237 ANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGI 296

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+ +++I++L ACSH+GL+ EGW+ F  M DE  +  ++EHYAC+VDLL RSG L  A 
Sbjct: 297 EPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACIVDLLARSGKLAMAY 356

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           +FI+SMP+  D  +W   L  CR+H D +L +  AE + E +P++   ++LL+N YA A 
Sbjct: 357 KFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFELEPENTGYYVLLANTYAEAE 416

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE V  +R+++  R L K  GCSWIE  +KVH F  G +SHP+  +I   L +L  K+K
Sbjct: 417 KWEEVKKLRQKIGRRGLKKNPGCSWIEVKSKVHIFLAGNSSHPQAKKIEVLLKRLRSKMK 476

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY P T + L   +  QK   L  HSEK+A+AFG+++   ++ IRV KNLRVCGDCH 
Sbjct: 477 EEGYFPKTRYALINADSLQKETALCGHSEKLAMAFGILNLPPARTIRVSKNLRVCGDCHE 536

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             K+IS   GREIVLRDSNRFHH KDG C C  +W
Sbjct: 537 MAKFISKTLGREIVLRDSNRFHHFKDGVCCCRGFW 571



 Score =  168 bits (426), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/391 (28%), Positives = 202/391 (51%), Gaps = 19/391 (4%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           ++++AC+N  +V++G  ++G  +K C ++ +  C    L+DM+ K  V L+ A  VFD M
Sbjct: 3   SILQACANCGDVSLGRAVHGSGVKACVHWKTTFCN--TLLDMYAKCGV-LDGAILVFDLM 59

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
           + +  V WT +I    + G   +AIRLF +M   G  PD FT++ V+ AC+      +GK
Sbjct: 60  SVRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGK 119

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            +H++     +  ++ V  +L+DMYAKC   GS++D+  VF  M   +++SW  +I GY 
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKC---GSMEDANSVFLEMPVKDIISWNTMIGGYS 176

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           ++     EA+ LF DM+  ++ P+  T A +L AC +L   +  ++V+ H ++ G   D 
Sbjct: 177 KN-SLPNEALSLFGDMVL-EMKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQ 234

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V N+L+ MY + G    AR  F+ +  K+L+++  M+  Y  +     A    +E+   
Sbjct: 235 QVANALVDMYVKCGVPVLARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQA 294

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESNHCIYNALISMYSRCA 538
           G+     +F S+L   S  G + +G +    +     +K   E   CI    + + +R  
Sbjct: 295 GIEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECNVKPKLEHYACI----VDLLARSG 350

Query: 539 NVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
            +  A++  K M  + +   W ++++G   H
Sbjct: 351 KLAMAYKFIKSMPIEPDATIWGALLSGCRIH 381



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 211/416 (50%), Gaps = 31/416 (7%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L++C    +  LG+ VH    ++ +   +   N+L+ +Y+KCG L+ A  +F  M + R
Sbjct: 4   ILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLM-SVR 62

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +V+W+S+I++Y   G   +AI +F EM   G  P+ +  + V+ AC+   ++  G  ++
Sbjct: 63  TVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVH 122

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
            ++ +     S++ V  AL+DM+ K    +E A  VF +M  K+ + W  MI   ++   
Sbjct: 123 NYIRE-NDMQSNIFVCNALMDMYAKCG-SMEDANSVFLEMPVKDIISWNTMIGGYSKNSL 180

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
           P +A+ LF DM+L    PD  TL+ ++ AC+ L     GK++H   +R G   D  V  +
Sbjct: 181 PNEALSLFGDMVLE-MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFFSDQQVANA 239

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           LVDMY KC V      +R +FD +   ++++WT +I GY   G  +  A+  F++M Q  
Sbjct: 240 LVDMYVKCGVPVL---ARLLFDMIPTKDLITWTVMIAGYGMHGFGNN-AITTFNEMRQAG 295

Query: 384 VAPNHFTFASVLKACGN--LLDS-----NVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
           + P+  +F S+L AC +  LLD      NV +      VK       C+    + + ARS
Sbjct: 296 IEPDEVSFISILYACSHSGLLDEGWRFFNVMQDECN--VKPKLEHYACI----VDLLARS 349

Query: 437 GRMEDARKAFESL-FEKNLVSYNTMV-------DAYAKNLNSEKAFELLHEIEDTG 484
           G++  A K  +S+  E +   +  ++       D       +E  FEL  E E+TG
Sbjct: 350 GKLAMAYKFIKSMPIEPDATIWGALLSGCRIHHDVKLAEKVAEHVFEL--EPENTG 403



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 89/312 (28%), Positives = 160/312 (51%), Gaps = 17/312 (5%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G   +AI     M ++G  PD+ T + +L +C  + +   GK VH+ +  + ++ N  +
Sbjct: 77  EGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENGKDVHNYIRENDMQSNIFV 136

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+ +Y+KCG + +AN +F  M  K DI+SW++MI  Y       +A+ +F +M+ L 
Sbjct: 137 CNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGGYSKNSLPNEALSLFGDMV-LE 194

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+    + ++ AC++  ++  G  ++G +L+ G+F SD  V  AL+DM+VK  V +  
Sbjct: 195 MKPDGTTLACILPACASLASLDRGKEVHGHILRNGFF-SDQQVANALVDMYVKCGVPV-L 252

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +FD +  K+ + WT+MI      G   +AI  F +M  +G  PD  +   ++ ACS 
Sbjct: 253 ARLLFDMIPTKDLITWTVMIAGYGMHGFGNNAITTFNEMRQAGIEPDEVSFISILYACSH 312

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRM-LD 349
             L   G +  +      +  D C     ++ YA C VD     G +  + K    M ++
Sbjct: 313 SGLLDEGWRFFN------VMQDECNVKPKLEHYA-CIVDLLARSGKLAMAYKFIKSMPIE 365

Query: 350 HNVMSWTAIITG 361
            +   W A+++G
Sbjct: 366 PDATIWGALLSG 377



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 9/202 (4%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
             S+L   ++ G +  G  +H   +K+         N L+ MY++C  ++ A  VF  M 
Sbjct: 1   MVSILQACANCGDVSLGRAVHGSGVKACVHWKTTFCNTLLDMYAKCGVLDGAILVFDLMS 60

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            R V++WTS+I  +A+ G +  A+ +F++M  +G+ P+  T   VL AC+  G +  G K
Sbjct: 61  VRTVVTWTSLIAAYAREGLSDEAIRLFHEMDREGVSPDIFTITTVLHACACNGSLENG-K 119

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
              +   E+ +   +     ++D+  + GS+ +A      MP+  D++ W T +G    +
Sbjct: 120 DVHNYIRENDMQSNIFVCNALMDMYAKCGSMEDANSVFLEMPVK-DIISWNTMIGG---Y 175

Query: 672 GDTELGKHA----AEMILEQDP 689
               L   A     +M+LE  P
Sbjct: 176 SKNSLPNEALSLFGDMVLEMKP 197


>gi|218546768|sp|Q8S9M4.2|PP198_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g41080
          Length = 650

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 238/631 (37%), Positives = 374/631 (59%), Gaps = 9/631 (1%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L  A++ F      NT  +T  I  CT         +L   +++SGF  D+F  + ++S
Sbjct: 28  NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMS 87

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
             S+L  F S   ++   +R    +   +   L++ Y +    G + ++RKVFD M D  
Sbjct: 88  MYSKLGDFPSAVAVYG-RMRKKNYMSSNI---LINGYVRA---GDLVNARKVFDEMPDRK 140

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           + +W A+I G +Q    ++E + LF +M     +P+ +T  SV      L   ++ +Q++
Sbjct: 141 LTTWNAMIAGLIQFE-FNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 199

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            + +K G  LD  V +SL  MY R+G+++D      S+  +NLV++NT++   A+N   E
Sbjct: 200 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE 259

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
               L   ++ +G   +  TF ++LS  S +   G+G+QIHA  IK G  S   + ++LI
Sbjct: 260 TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 319

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD-GIKPNG 590
           SMYS+C  +  A + F E ED + + W+SMI+ +  HG    A+E+F  M     ++ N 
Sbjct: 320 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 379

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           + ++ +L ACSH+GL  +G + F  M +++G    ++HY C+VDLLGR+G L +A   IR
Sbjct: 380 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 439

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           SMP+  D+++W+T L AC +H + E+ +   + IL+ DP D A ++LL+N++ASA  W  
Sbjct: 440 SMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRD 499

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V+ +RK M+++N+ KEAG SW E   +VH+F +G+ S  K+ EIY+ L +L L++K  GY
Sbjct: 500 VSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 559

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
            PDT  VLH+++EE+K   L QHSEK+AVAF L+   +  PIR+ KNLRVC DCH A KY
Sbjct: 560 KPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKY 619

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IS++  REI LRD +RFHH  +GKCSC DYW
Sbjct: 620 ISVIKNREITLRDGSRFHHFINGKCSCGDYW 650



 Score =  162 bits (410), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 229/484 (47%), Gaps = 58/484 (11%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAI--FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           + +P + +P +  +    + G +++A   F L++ T      +   ++  ++SC   ++ 
Sbjct: 8   VVRPLSVDP-ATAIATLCSKGNLREAFQRFRLNIFT------NTSLFTPFIQSCTTRQSL 60

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSK----------------------------- 125
             GK +H LL  S    +  I N L+S+YSK                             
Sbjct: 61  PSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGY 120

Query: 126 --CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
              GDL  A K+F  M + R + +W++MI+  +      + + +F EM  LGF P+EY  
Sbjct: 121 VRAGDLVNARKVFDEMPD-RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 179

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
            +V    +   +V+IG  I+G+ +K G  + D+ V  +L  M+++    L+    V   M
Sbjct: 180 GSVFSGSAGLRSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMRNG-KLQDGEIVIRSM 237

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
             +N V W  +I    Q GCP   + L+  M +SG  P++ T   V+S+CS+L +   G+
Sbjct: 238 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 297

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+ AI+ G +  V V  SL+ MY+KC   G + D+ K F    D + + W+++I+ Y 
Sbjct: 298 QIHAEAIKIGASSVVAVVSSLISMYSKC---GCLGDAAKAFSEREDEDEVMWSSMISAYG 354

Query: 364 QSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGN--LLDSNVA---EQVYTHAVKR 417
             G  D EA++LF+ M  Q  +  N   F ++L AC +  L D  +      V  +  K 
Sbjct: 355 FHGQGD-EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 413

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           G     CV    + +  R+G ++ A     S+  + ++V + T++ A   + N+E A  +
Sbjct: 414 GLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 469

Query: 477 LHEI 480
             EI
Sbjct: 470 FKEI 473



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 12/227 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSC----IRSRNFHLGKLVHSLLTRSKLE 110
            +G  +  ++   +M   G  P+  T+  +L SC    IR +    G+ +H+   +    
Sbjct: 254 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ----GQQIHAEAIKIGAS 309

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
               +++SLIS+YSKCG L +A K F S     D V WSSMIS+Y   G+  +AI +F  
Sbjct: 310 SVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 368

Query: 171 MLE-LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           M E      NE  F  ++ ACS++     G  ++  +++   F   +     ++D+  + 
Sbjct: 369 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 428

Query: 230 SVDLESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
              L+ A  +   M  K + V W  +++ C        A R+F +++
Sbjct: 429 GC-LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 474


>gi|356526928|ref|XP_003532067.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Glycine max]
          Length = 722

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 254/649 (39%), Positives = 375/649 (57%), Gaps = 16/649 (2%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI+ + K S+ +  A +VFD++ + + V +  +I      G     +RLF ++       
Sbjct: 81  LINAYAKHSL-IHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGL 139

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D FTLSGV++AC +       +QLH + +  G      V  +++  Y++    G + ++R
Sbjct: 140 DGFTLSGVITACGDDVGLV--RQLHCFVVVCGHDCYASVNNAVLACYSR---KGFLSEAR 194

Query: 342 KVFDRMLD---HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           +VF  M +    + +SW A+I    Q      EAV LF +M++  +  + FT ASVL A 
Sbjct: 195 RVFREMGEGGGRDEVSWNAMIVACGQHR-EGMEAVGLFREMVRRGLKVDMFTMASVLTAF 253

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR-SGRMEDARKAFESLFEKNLVSY 457
             + D     Q +   +K G   +  VG+ LI +Y++ +G M + RK FE +   +LV +
Sbjct: 254 TCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCAGSMVECRKVFEEITAPDLVLW 313

Query: 458 NTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           NTM+  ++   + SE       E++  G      +F  + S  S++ +   G+Q+HA  I
Sbjct: 314 NTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAI 373

Query: 517 KSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           KS    N   + NAL++MYS+C NV  A +VF  M + N +S  SMI G+A+HG    +L
Sbjct: 374 KSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIAGYAQHGVEVESL 433

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
            +F  ML   I PN IT+IAVLSAC H G + EG K+F  M +   I    EHY+CM+DL
Sbjct: 434 RLFELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDL 493

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
           LGR+G L EA   I +MP +   + W T LGACR HG+ EL   AA   L  +P + A +
Sbjct: 494 LGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRLEPYNAAPY 553

Query: 696 ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
           ++LSN+YASA  WE  A +++ M+ER + K+ GCSWIE D KVH F   +TSHP   EI+
Sbjct: 554 VMLSNMYASAARWEEAATVKRLMRERGVKKKPGCSWIEIDKKVHVFVAEDTSHPMIKEIH 613

Query: 756 AELDQLALKIKEFGYLPDTNFVL---HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
             + ++  K+K+ GY+PD  + L    E+E +++ + L  HSEK+AVAFGLIST +  PI
Sbjct: 614 VYMGKMLKKMKQAGYVPDIRWALVKDEEVEPDERERRLLYHSEKLAVAFGLISTEEGVPI 673

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V KNLR+CGDCH A+K IS +TGREI +RD++RFH  K+G CSC DYW
Sbjct: 674 LVVKNLRICGDCHNAVKLISALTGREITVRDTHRFHCFKEGHCSCRDYW 722



 Score =  217 bits (552), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 151/550 (27%), Positives = 282/550 (51%), Gaps = 57/550 (10%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
            L T+  LLK+CI  R+   GK++H+L  +S + P++ + N    LYSKCG L+ A   F
Sbjct: 8   QLQTFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSF 67

Query: 137 -----------KSMGN-------------------KRDIVSWSSMISSYVNRGKQVDAIH 166
                       ++ N                   + DIVS++++I++Y +RG+    + 
Sbjct: 68  HLTQYPNVFSYNTLINAYAKHSLIHIARRVFDEIPQPDIVSYNTLIAAYADRGECGPTLR 127

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F E+ EL    + +  S VI AC +  +V +   ++ F++ CG+ D    V  A++  +
Sbjct: 128 LFEEVRELRLGLDGFTLSGVITACGD--DVGLVRQLHCFVVVCGH-DCYASVNNAVLACY 184

Query: 227 VKGSVDLESAYKVFDKMTE---KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            +    L  A +VF +M E   ++ V W  MI  C Q     +A+ LF +M+  G   D 
Sbjct: 185 SRKGF-LSEARRVFREMGEGGGRDEVSWNAMIVACGQHREGMEAVGLFREMVRRGLKVDM 243

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           FT++ V++A + ++    G+Q H   I++G   +  VG  L+D+Y+KC   GS+ + RKV
Sbjct: 244 FTMASVLTAFTCVKDLVGGRQFHGMMIKSGFHGNSHVGSGLIDLYSKCA--GSMVECRKV 301

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F+ +   +++ W  +I+G+       ++ +  F +M +    P+  +F  V  AC NL  
Sbjct: 302 FEEITAPDLVLWNTMISGFSLYEDLSEDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSS 361

Query: 404 SNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
            ++ +QV+  A+K     +   V N+L++MY++ G + DAR+ F+++ E N VS N+M+ 
Sbjct: 362 PSLGKQVHALAIKSDVPYNRVSVNNALVAMYSKCGNVHDARRVFDTMPEHNTVSLNSMIA 421

Query: 463 AYAKN---LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            YA++   + S + FEL+ E +   +  ++ TF ++LS     G + +G++ +  ++K  
Sbjct: 422 GYAQHGVEVESLRLFELMLEKD---IAPNSITFIAVLSACVHTGKVEEGQK-YFNMMKER 477

Query: 520 F----ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FA 571
           F    E+ H  Y+ +I +  R   ++ A ++ + M  +   I W +++    KHG    A
Sbjct: 478 FCIEPEAEH--YSCMIDLLGRAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELA 535

Query: 572 ARALEIFYKM 581
            +A   F ++
Sbjct: 536 VKAANEFLRL 545



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 71/291 (24%), Positives = 140/291 (48%), Gaps = 17/291 (5%)

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           NHFT   +   CG+L ++    Q   H  +          N+LI+ YA+   +  AR+ F
Sbjct: 48  NHFTL--LYSKCGSLHNA----QTSFHLTQYPNVFSY---NTLINAYAKHSLIHIARRVF 98

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + + + ++VSYNT++ AYA          L  E+ +  +G   +T + +++       +G
Sbjct: 99  DEIPQPDIVSYNTLIAAYADRGECGPTLRLFEEVRELRLGLDGFTLSGVITACGD--DVG 156

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED---RNVISWTSMIT 563
              Q+H  ++  G +    + NA+++ YSR   +  A +VF+EM +   R+ +SW +MI 
Sbjct: 157 LVRQLHCFVVVCGHDCYASVNNAVLACYSRKGFLSEARRVFREMGEGGGRDEVSWNAMIV 216

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
              +H     A+ +F +M+  G+K +  T  +VL+A +    +  G + F  M  + G  
Sbjct: 217 ACGQHREGMEAVGLFREMVRRGLKVDMFTMASVLTAFTCVKDLV-GGRQFHGMMIKSGFH 275

Query: 624 QRMEHYACMVDLLGR-SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
                 + ++DL  + +GS+ E  +    +  + D+++W T +    ++ D
Sbjct: 276 GNSHVGSGLIDLYSKCAGSMVECRKVFEEIT-APDLVLWNTMISGFSLYED 325



 Score = 87.4 bits (215), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 106/205 (51%), Gaps = 4/205 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV-ILNS 118
           +  ++    M + G  PD  ++  +  +C    +  LGK VH+L  +S +  N V + N+
Sbjct: 328 EDGLWCFREMQRNGFRPDDCSFVCVTSACSNLSSPSLGKQVHALAIKSDVPYNRVSVNNA 387

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L+++YSKCG++++A ++F +M  + + VS +SMI+ Y   G +V+++ +F  MLE    P
Sbjct: 388 LVAMYSKCGNVHDARRVFDTM-PEHNTVSLNSMIAGYAQHGVEVESLRLFELMLEKDIAP 446

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N   F AV+ AC +T  V  G   +  + +    + +      +ID+  +    L+ A +
Sbjct: 447 NSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLGRAG-KLKEAER 505

Query: 239 VFDKMT-EKNTVGWTLMITRCTQLG 262
           + + M     ++ W  ++  C + G
Sbjct: 506 IIETMPFNPGSIEWATLLGACRKHG 530



 Score = 43.1 bits (100), Expect = 0.74,   Method: Compositional matrix adjust.
 Identities = 47/218 (21%), Positives = 85/218 (38%), Gaps = 44/218 (20%)

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           TF +LL    +   +  G+ +HA   KS    +  + N    +YS+C ++  A   F   
Sbjct: 11  TFRNLLKACIAQRDLITGKILHALYFKSLIPPSTYLSNHFTLLYSKCGSLHNAQTSFHLT 70

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           +  NV S+ ++I  +AKH     A  +F ++     +P+ ++Y  +++A +  G      
Sbjct: 71  QYPNVFSYNTLINAYAKHSLIHIARRVFDEI----PQPDIVSYNTLIAAYADRGECGPTL 126

Query: 611 KHFRSMY-------------------DEHGIVQRMEHYACMVDLLG-------------- 637
           + F  +                    D+ G+V+++    C V + G              
Sbjct: 127 RLFEEVRELRLGLDGFTLSGVITACGDDVGLVRQLH---CFVVVCGHDCYASVNNAVLAC 183

Query: 638 --RSGSLTEALEFIRSMPLSA--DVLVWRTFLGACRVH 671
             R G L+EA    R M      D + W   + AC  H
Sbjct: 184 YSRKGFLSEARRVFREMGEGGGRDEVSWNAMIVACGQH 221



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 25/110 (22%), Positives = 52/110 (47%), Gaps = 1/110 (0%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT-RSKLEPNSVILNSLISLYS 124
            +LM +K   P+  T+  +L +C+ +     G+   +++  R  +EP +   + +I L  
Sbjct: 436 FELMLEKDIAPNSITFIAVLSACVHTGKVEEGQKYFNMMKERFCIEPEAEHYSCMIDLLG 495

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + G L EA +I ++M      + W++++ +    G    A+    E L L
Sbjct: 496 RAGKLKEAERIIETMPFNPGSIEWATLLGACRKHGNVELAVKAANEFLRL 545


>gi|356562443|ref|XP_003549481.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g13650-like [Glycine max]
          Length = 836

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 265/864 (30%), Positives = 438/864 (50%), Gaps = 147/864 (17%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           + + +H+ L  S L+ +  +LN+L+ +YS CG +++A ++F+   N  +I +W++M+ ++
Sbjct: 22  IARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFRE-ANHANIFTWNTMLHAF 80

Query: 156 VNRGKQVDAIHMFVEMLEL------------GFCPN------------------------ 179
            + G+  +A ++F EM  +            G+C N                        
Sbjct: 81  FDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTFMSMLRDSNHDIQNC 140

Query: 180 -EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES-- 235
             + ++  ++AC    +      ++  ++K  +  +  C+  +L+DM++K G++ L    
Sbjct: 141 DPFSYTCTMKACGCLASTRFALQLHAHVIKL-HLGAQTCIQNSLVDMYIKCGAITLAETV 199

Query: 236 ---------------------------AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
                                      A  VF +M E++ V W  +I+  +Q G     +
Sbjct: 200 FLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLISVFSQYGHGIRCL 259

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
             F++M   GF P+  T   V+SAC+ +     G  LH+  +R   +LD  +G  L+DMY
Sbjct: 260 STFVEMCNLGFKPNFMTYGSVLSACASISDLKWGAHLHARILRMEHSLDAFLGSGLIDMY 319

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           AKC   G +  +R+VF+ + + N +SWT +I+G  Q G RD +A+ LF+ M Q  V  + 
Sbjct: 320 AKC---GCLALARRVFNSLGEQNQVSWTCLISGVAQFGLRD-DALALFNQMRQASVVLDE 375

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA------ 442
           FT A++L  C     +   E ++ +A+K G      VGN++I+MYAR G  E A      
Sbjct: 376 FTLATILGVCSGQNYAATGELLHGYAIKSGMDSFVPVGNAIITMYARCGDTEKASLAFRS 435

Query: 443 -------------------------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
                                    R+ F+ + E+N++++N+M+  Y ++  SE+  +L 
Sbjct: 436 MPLRDTISWTAMITAFSQNGDIDRARQCFDMMPERNVITWNSMLSTYIQHGFSEEGMKLY 495

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
             +    V     TFA+ +   + +  I  G Q+ + + K G  S+  + N++++MYSRC
Sbjct: 496 VLMRSKAVKPDWVTFATSIRACADLATIKLGTQVVSHVTKFGLSSDVSVANSIVTMYSRC 555

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             ++ A +VF  +  +N+ISW +M+  FA++G   +A+E +  ML    KP+ I+Y+AVL
Sbjct: 556 GQIKEARKVFDSIHVKNLISWNAMMAAFAQNGLGNKAIETYEDMLRTECKPDHISYVAVL 615

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           S                                   DLLGR+G L +A   I  MP   +
Sbjct: 616 S-----------------------------------DLLGRAGLLDQAKNLIDGMPFKPN 640

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
             VW   LGACR+H D+ L + AA+ ++E + +D   ++LL+N+YA +G  E VA++RK 
Sbjct: 641 ATVWGALLGACRIHHDSILAETAAKKLMELNVEDSGGYVLLANIYAESGELENVADMRKL 700

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
           MK + + K  GCSWIE DN+VH F V ETSHP+  E+Y +L+++  KI++ G        
Sbjct: 701 MKVKGIRKSPGCSWIEVDNRVHVFTVDETSHPQINEVYVKLEEMMKKIEDTGRYVSIVSC 760

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
            H  ++         HSEK+A AFGL+S     PI+V KNLRVC DCH  IK +S+VT R
Sbjct: 761 AHRSQK--------YHSEKLAFAFGLLSLPPWMPIQVTKNLRVCNDCHLVIKLLSLVTSR 812

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           E+++RD  RFHH KDG CSC DYW
Sbjct: 813 ELIMRDGFRFHHFKDGFCSCRDYW 836



 Score =  230 bits (587), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 155/543 (28%), Positives = 270/543 (49%), Gaps = 71/543 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHP----DLDTYSLLLKSC--IRSRNFHLGKLVHSLLTR 106
           +  +G    +I T   M +  NH     D  +Y+  +K+C  + S  F L   +H+ + +
Sbjct: 113 YCQNGLPAHSIKTFMSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQ--LHAHVIK 170

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN------------------------- 141
             L   + I NSL+ +Y KCG +  A  +F ++ +                         
Sbjct: 171 LHLGAQTCIQNSLVDMYIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHV 230

Query: 142 -----KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
                +RD VSW+++IS +   G  +  +  FVEM  LGF PN   + +V+ AC++  ++
Sbjct: 231 FTRMPERDHVSWNTLISVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDL 290

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
             G  ++  +L+  +   D  +G  LIDM+ K    L  A +VF+ + E+N V WT +I+
Sbjct: 291 KWGAHLHARILRMEH-SLDAFLGSGLIDMYAKCGC-LALARRVFNSLGEQNQVSWTCLIS 348

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
              Q G   DA+ LF  M  +  + D FTL+ ++  CS      +G+ LH +AI++G+  
Sbjct: 349 GVAQFGLRDDALALFNQMRQASVVLDEFTLATILGVCSGQNYAATGELLHGYAIKSGMDS 408

Query: 317 DVCVGCSLVDMYAKC----------------------------TVDGSVDDSRKVFDRML 348
            V VG +++ MYA+C                            + +G +D +R+ FD M 
Sbjct: 409 FVPVGNAIITMYARCGDTEKASLAFRSMPLRDTISWTAMITAFSQNGDIDRARQCFDMMP 468

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + NV++W ++++ Y+Q  G  +E +KL+  M    V P+  TFA+ ++AC +L    +  
Sbjct: 469 ERNVITWNSMLSTYIQH-GFSEEGMKLYVLMRSKAVKPDWVTFATSIRACADLATIKLGT 527

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           QV +H  K G + D  V NS+++MY+R G++++ARK F+S+  KNL+S+N M+ A+A+N 
Sbjct: 528 QVVSHVTKFGLSSDVSVANSIVTMYSRCGQIKEARKVFDSIHVKNLISWNAMMAAFAQNG 587

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              KA E   ++  T       ++ ++LS    +G  G  +Q    I    F+ N  ++ 
Sbjct: 588 LGNKAIETYEDMLRTECKPDHISYVAVLSDL--LGRAGLLDQAKNLIDGMPFKPNATVWG 645

Query: 529 ALI 531
           AL+
Sbjct: 646 ALL 648



 Score = 89.7 bits (221), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 82/336 (24%), Positives = 139/336 (41%), Gaps = 84/336 (25%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F    K CG+     +A +++   +  G      + N+L+ MY+  G ++DA + F    
Sbjct: 10  FYDAFKLCGS---PPIARKLHAQLILSGLDASLFLLNNLLHMYSNCGMVDDAFRVFREAN 66

Query: 451 EKNLVSYNTMVDAY---AKNLNSEKAF-ELLHEIEDTGVGT--------------SAYTF 492
             N+ ++NTM+ A+    +   +E  F E+ H + D+   T              S  TF
Sbjct: 67  HANIFTWNTMLHAFFDSGRMREAENLFDEMPHIVRDSVSWTTMISGYCQNGLPAHSIKTF 126

Query: 493 ASLLSGAS----------------SIGAIGKGE---QIHARIIKSGFESNHCIYNALISM 533
            S+L  ++                + G +       Q+HA +IK    +  CI N+L+ M
Sbjct: 127 MSMLRDSNHDIQNCDPFSYTCTMKACGCLASTRFALQLHAHVIKLHLGAQTCIQNSLVDM 186

Query: 534 YSRCA----------NVEA---------------------AFQVFKEMEDRNVISWTSMI 562
           Y +C           N+E+                     A  VF  M +R+ +SW ++I
Sbjct: 187 YIKCGAITLAETVFLNIESPSLFCWNSMIYGYSQLYGPYEALHVFTRMPERDHVSWNTLI 246

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           + F+++G   R L  F +M   G KPN +TY +VLSAC+    +  G  H       H  
Sbjct: 247 SVFSQYGHGIRCLSTFVEMCNLGFKPNFMTYGSVLSACASISDLKWG-AHL------HAR 299

Query: 623 VQRMEHY------ACMVDLLGRSGSLTEALEFIRSM 652
           + RMEH       + ++D+  + G L  A     S+
Sbjct: 300 ILRMEHSLDAFLGSGLIDMYAKCGCLALARRVFNSL 335


>gi|302794420|ref|XP_002978974.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
 gi|300153292|gb|EFJ19931.1| hypothetical protein SELMODRAFT_109721 [Selaginella moellendorffii]
          Length = 948

 Score =  452 bits (1162), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 245/822 (29%), Positives = 448/822 (54%), Gaps = 25/822 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G   +A+  L L   K    D    ++ +++    R+  LG+  H  + R   + +
Sbjct: 139 YVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDLSLGRFFHDTIRRCGYDLD 198

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSM---GNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + +  SLI +YS CG++  A + F          D+VSW+ ++++       + A+ +F 
Sbjct: 199 AGVAISLIGMYSNCGEIEAAVQAFDRAFLRAPSSDVVSWTKILAACNEHRDYIGALDLFD 258

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            M E G  P+  CF  V+ +     ++A G  I+  +L     + D  +G A++ M+ + 
Sbjct: 259 RMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLD-RELERDSMIGTAVVKMYARI 317

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           GS+  + A + FD++ +     WT++I    +LG     +++   M   G  P+  T   
Sbjct: 318 GSI--QDACRAFDRIDQPGVAAWTVLIGAYCRLGSFNSVMQILERMEAEGVKPNEVTFIT 375

Query: 289 VVSACSELELFTSGKQLHSWA---IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           ++  C  L L   GK++ + A    +  L     +G +++ M+++ +   S+  +R+ FD
Sbjct: 376 ILDTCKNLAL-EDGKKIQALASEQQQRSLDASARIGTAVIGMFSRFS---SMILAREAFD 431

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           ++   +V ++TA+I GY  +  + +EA+ +F +MI+ +VA ++   A  + AC ++ D  
Sbjct: 432 KISQKSVAAYTAMIAGYANNK-QPREALAIFQEMIRRRVAADNLVLAVAISACASIPDLE 490

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             + ++  A+  G   DD V  +L+ MY+R G MEDA   F  +   + ++++ M+ A  
Sbjct: 491 EGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEIERPDTIAWSAMIAALG 550

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNH 524
           ++ +   A  +   ++  G   +  T   +L+  +  G + +   ++H+ ++  GF+S+ 
Sbjct: 551 RHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAARKVHSLLVDGGFDSDP 610

Query: 525 CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF---AKHGFAARALEIFYKM 581
            +  A++ MY++  +++ A   F ++E+ +V +WT+M+  +    K+  + RAL++   M
Sbjct: 611 EVKFAVMRMYAKVGSIQEACNAFDKIENPDVKAWTTMLEAYCRLGKYNASDRALKLARMM 670

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
             DG+ P+ +T++ +L+AC++ G + E  ++F+ M  ++G+V  MEHY  +VD + R G 
Sbjct: 671 QQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMKFDYGLVPEMEHYVALVDTVARKGY 730

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE-QDPQDPAAHILLSN 700
           L EA + IR +PL  + ++W   L  C+   D    +   E+I++  +  DP    L + 
Sbjct: 731 LQEAEDLIRMVPLQVNEIIWFALLECCKSQNDAPRTQRVGEIIMKINNKLDP----LGTG 786

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
            +  A  WE    +RK M +R + KE G S I   N VH F  G+ SHP T EIYAE+D+
Sbjct: 787 AHRVAARWEEAKRVRKLMTDRGIKKEPGKSMISIKNTVHGFVAGDRSHPHTREIYAEVDR 846

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +   IK+ GY+PDT +VLH++ E++K + L+ HSE++A+A+G ++T   +P+RV KNLRV
Sbjct: 847 ITALIKKDGYIPDTRYVLHDVPEDKKERLLWYHSERLAMAYGHMNTPPGQPLRVIKNLRV 906

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
           CGDCHTA K  + V  REI++RD+ RFHH  KDG CSC DYW
Sbjct: 907 CGDCHTASKLYAKVMQREIIVRDNRRFHHFAKDGTCSCGDYW 948



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 183/659 (27%), Positives = 319/659 (48%), Gaps = 30/659 (4%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D+D+Y  +L+ C R R    G  VH  + RS++E    + N L+ +Y+  G+  EA +IF
Sbjct: 62  DVDSYQHVLQLCTRLRAMAEGARVHDHIRRSRMEAERFVGNDLVFMYAAFGNPGEARRIF 121

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             +G+  +I+S+++++ +YV  G   +A+ +        F  +    +  + A     ++
Sbjct: 122 DGLGS-HNILSFTAIMRAYVTAGDPDEALKILHLARLKAFKADPPMLAMAVEAAGMKRDL 180

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD----KMTEKNTVGWT 252
           ++G   +  + +CGY D D  V  +LI M+     ++E+A + FD    +    + V WT
Sbjct: 181 SLGRFFHDTIRRCGY-DLDAGVAISLIGMYSNCG-EIEAAVQAFDRAFLRAPSSDVVSWT 238

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            ++  C +      A+ LF  M   G +PDR     V+ +   L     GK++HS  +  
Sbjct: 239 KILAACNEHRDYIGALDLFDRMREQGVVPDRICFVTVLDSVIGLGDIAQGKRIHSMVLDR 298

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            L  D  +G ++V MYA+    GS+ D+ + FDR+    V +WT +I  Y + G  +   
Sbjct: 299 ELERDSMIGTAVVKMYARI---GSIQDACRAFDRIDQPGVAAWTVLIGAYCRLGSFN-SV 354

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLI 430
           +++   M    V PN  TF ++L  C NL   +  +     + ++ R+LD    +G ++I
Sbjct: 355 MQILERMEAEGVKPNEVTFITILDTCKNLALEDGKKIQALASEQQQRSLDASARIGTAVI 414

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            M++R   M  AR+AF+ + +K++ +Y  M+  YA N    +A  +  E+    V     
Sbjct: 415 GMFSRFSSMILAREAFDKISQKSVAAYTAMIAGYANNKQPREALAIFQEMIRRRVAADNL 474

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
             A  +S  +SI  + +G+ +H   +  G   +  +  AL+ MYSRC ++E A  VF E+
Sbjct: 475 VLAVAISACASIPDLEEGKALHCSAMDLGLHRDDVVRTALVDMYSRCGSMEDASAVFGEI 534

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           E  + I+W++MI    +HG    A+ +  +M  DG +P G T + VL+AC+HAG++ E  
Sbjct: 535 ERPDTIAWSAMIAALGRHGDPRGAVAMAARMQQDGWRPTGATMVGVLAACAHAGMMEEAA 594

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA-CR 669
           +   S+  + G     E    ++ +  + GS+ EA      +  + DV  W T L A CR
Sbjct: 595 RKVHSLLVDGGFDSDPEVKFAVMRMYAKVGSIQEACNAFDKIE-NPDVKAWTTMLEAYCR 653

Query: 670 VHGDTELGKHAAE-------MILEQDPQDPAAHILLSNLYASA--GHWEYVANIRKRMK 719
                 LGK+ A         +++QD   P     +  L A A  GH +      K MK
Sbjct: 654 ------LGKYNASDRALKLARMMQQDGVMPDKVTFVDILTACAYGGHLQEAGRYFKDMK 706


>gi|297804050|ref|XP_002869909.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297315745|gb|EFH46168.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 595

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 230/567 (40%), Positives = 349/567 (61%), Gaps = 5/567 (0%)

Query: 299 FTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWT 356
            T  +Q+H+++IR G+++ D  +G  L+           +  + KVF ++    NV  W 
Sbjct: 30  LTKLRQIHAFSIRNGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89

Query: 357 AIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            +I GY + G     AV L+ +M   G V P+  T+  +LKA G + D  + E +++  +
Sbjct: 90  TLIRGYAEIGN-SVSAVSLYREMRASGFVEPDTHTYPFLLKAVGKMADVRLGETIHSVVI 148

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           + G      V NSL+ +YA  G +  A K F+ + EK+LV++N++++ +A+N   E+A  
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  E++  G+    +T  SLLS  + IGA+  G++ H  +IK G   N    N L+ +Y+
Sbjct: 209 LYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYA 268

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYI 594
           RC  VE A  +F EM D+N +SWTS+I G A +G    A+E+F  M + +G+ P  IT++
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGLGKEAIELFKNMESKEGLLPCEITFV 328

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            +L ACSH G++ EG+++FR M +E+ I  R+EH+ CMVDLL R+G + +A E+I  MP+
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGCMVDLLARAGQVKKAYEYILKMPM 388

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             +V++WRT LGAC VHGD++L + A   IL+ +P     ++LLSN+YAS   W  V  I
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAELARMKILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           RK+M    + K  G S +E  N+VH+F +G+ SHP+   IYA+L ++  +++  GY+P  
Sbjct: 449 RKQMLRDGVRKVPGHSLVEVGNRVHEFLMGDKSHPQNDMIYAKLKEMTDRLRLEGYVPQI 508

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           + V  ++EEE+K   L  HSEKIA+AF LIST +  PIRV KNL+VC DCH AIK +S V
Sbjct: 509 SNVYVDVEEEEKENALVYHSEKIAIAFMLISTPERWPIRVVKNLKVCADCHLAIKLVSKV 568

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             REIV+RD +RFHH K+G CSC DYW
Sbjct: 569 YNREIVVRDRSRFHHFKNGSCSCQDYW 595



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 106/354 (29%), Positives = 195/354 (55%), Gaps = 21/354 (5%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC- 177
           L+SL S    ++ A+K+F  +    ++  W+++I  Y   G  V A+ ++ EM   GF  
Sbjct: 60  LVSLPSP-PPMSYAHKVFSKIEKPINVFIWNTLIRGYAEIGNSVSAVSLYREMRASGFVE 118

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+ + +  +++A     +V +G  I+  +++ G F S + V  +L+ ++     D+ SAY
Sbjct: 119 PDTHTYPFLLKAVGKMADVRLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCG-DVASAY 176

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           KVFDKM EK+ V W  +I    + G P +A+ L+ +M L G  PD FT+  ++SAC+++ 
Sbjct: 177 KVFDKMPEKDLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIG 236

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
             T GK+ H + I+ GL  ++     L+D+YA+C   G V++++ +FD M+D N +SWT+
Sbjct: 237 ALTLGKRFHVYMIKVGLTRNLHSSNVLLDLYARC---GRVEEAKTLFDEMVDKNSVSWTS 293

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQV-YTHAV 415
           +I G +   G  KEA++LF +M   + + P   TF  +L AC +     V E   Y   +
Sbjct: 294 LIVG-LAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHC--GMVKEGFEYFRRM 350

Query: 416 KRGRALDDCVGN--SLISMYARSGRMEDARKAFESLF----EKNLVSYNTMVDA 463
                ++  + +   ++ + AR+G++   +KA+E +     + N+V + T++ A
Sbjct: 351 SEEYKIEPRIEHFGCMVDLLARAGQV---KKAYEYILKMPMQPNVVIWRTLLGA 401



 Score =  129 bits (324), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 92/321 (28%), Positives = 159/321 (49%), Gaps = 22/321 (6%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  LLK+  +  +  LG+ +HS++ RS       + NSL+ LY+ CGD+  A K+
Sbjct: 119 PDTHTYPFLLKAVGKMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K D+V+W+S+I+ +   GK  +A+ ++ EM   G  P+ +   +++ AC+    
Sbjct: 179 FDKMPEK-DLVAWNSVINGFAENGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGA 237

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           + +G   + +++K G    ++     L+D++ + G V  E A  +FD+M +KN+V WT +
Sbjct: 238 LTLGKRFHVYMIKVG-LTRNLHSSNVLLDLYARCGRV--EEAKTLFDEMVDKNSVSWTSL 294

Query: 255 ITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSG-----KQLHSW 308
           I      G  ++AI LF +M    G LP   T  G++ ACS   +   G     +    +
Sbjct: 295 IVGLAVNGLGKEAIELFKNMESKEGLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEY 354

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGG 367
            I   +      GC +VD+ A+    G V  + +   +M +  NV+ W  ++      G 
Sbjct: 355 KIEPRIE---HFGC-MVDLLARA---GQVKKAYEYILKMPMQPNVVIWRTLLGACTVHGD 407

Query: 368 RDKEAVKLFSDMIQGQVAPNH 388
            D   +   + M   Q+ PNH
Sbjct: 408 SD---LAELARMKILQLEPNH 425



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 6/210 (2%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+ ++A+     M  KG  PD  T   LL +C +     LGK  H  + +  L  N   
Sbjct: 200 NGKPEEALALYTEMDLKGIKPDGFTIVSLLSACAKIGALTLGKRFHVYMIKVGLTRNLHS 259

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LEL 174
            N L+ LY++CG + EA  +F  M +K   VSW+S+I      G   +AI +F  M  + 
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNS-VSWTSLIVGLAVNGLGKEAIELFKNMESKE 318

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV-CVGCALIDMFVKGSVDL 233
           G  P E  F  ++ ACS+   V  G   +  + +    +  +   GC ++D+  +    +
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMSEEYKIEPRIEHFGC-MVDLLARAG-QV 376

Query: 234 ESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
           + AY+   KM  + N V W  ++  CT  G
Sbjct: 377 KKAYEYILKMPMQPNVVIWRTLLGACTVHG 406


>gi|302771271|ref|XP_002969054.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
 gi|300163559|gb|EFJ30170.1| hypothetical protein SELMODRAFT_90563 [Selaginella moellendorffii]
          Length = 696

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 247/707 (34%), Positives = 414/707 (58%), Gaps = 27/707 (3%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M E G   +++  ++++ AC+  + +  G  ++  L+  G F +D+ +  AL+ M+ K G
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITG-FRTDIPLETALLQMYAKCG 59

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S+D   A +VF+ M  K+   W+ +I+   + G    A+ L+  MI  G  P+  T +  
Sbjct: 60  SLD--DAKRVFEGMEIKDLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACA 117

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +  C+ +     G+ +H   + + +  D  +  SL++MY KC     + ++RKVF+ M  
Sbjct: 118 LGGCASVAGLADGRAIHQRILASKVPQDDVLQDSLLNMYLKCD---EMVEARKVFEGMKA 174

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAE 408
            NV S+TA+I+ YVQ+G    EA++LFS M + + + PN +TFA++L A   L +     
Sbjct: 175 RNVRSYTAMISAYVQAG-EHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGR 233

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +V+ H   RG   +  V N+L++MY + G   +ARK F+S+  +N++S+ +M+ AYA++ 
Sbjct: 234 KVHRHLASRGFDTNVVVQNALVTMYGKCGSPVEARKVFDSMTARNVISWTSMIAAYAQHG 293

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           N ++A  L   ++   V  S  +F+S L+  + +GA+ +G +IH R++++   S   +  
Sbjct: 294 NPQEALNLFKRMD---VEPSGVSFSSALNACALLGALDEGREIHHRVVEAHLASPQ-MET 349

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           +L+SMY+RC +++ A +VF  M+ R+  S  +MI  F +HG   +AL I+ +M  +GI  
Sbjct: 350 SLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPA 409

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           +GIT+++VL ACSH  L+++    F+S+  +HG+V  +EHY CMVD+LGRSG L +A E 
Sbjct: 410 DGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEEL 469

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           + +MP   D + W T L  C+ HGD   G+ AA  + E  P +   ++ LSN+YA+A  +
Sbjct: 470 VETMPYQTDAVAWMTLLSGCKRHGDLNRGERAARKVFELAPAETLPYVFLSNMYAAAKRF 529

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG------ETSHPKTLE-IYAELDQL 761
           +    +RK M+ER +      S+IE DN++H F  G      E    +T+E + + L +L
Sbjct: 530 DDARRVRKEMEERGVTTPVAVSYIEIDNELHMFTSGGRDEQQEGHDGRTMERVRSLLLEL 589

Query: 762 ALKIKEFGYLPDTNFVLHELE----EEQKVQYLFQHSEKIAVAFGLISTS---KSKPIRV 814
              +K+ GY+PDT  V  E +    EE+K + L  HSE++A+A+GLI+      S+P+RV
Sbjct: 590 LEPMKQAGYVPDTREVYLEQQGGTSEEEKQRSLCFHSERLAIAYGLIAAKDPDDSRPLRV 649

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             + RVC DCH+AIK +S +  + I +RD NRFHH + G CSC D+W
Sbjct: 650 VNSHRVCSDCHSAIKLLSDIIEKTIFVRDGNRFHHFEKGACSCGDHW 696



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 137/504 (27%), Positives = 250/504 (49%), Gaps = 14/504 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G   D    + L+ +C + +    G+ +H  L  +    +  +  +L+ +Y+KCG 
Sbjct: 1   MEERGIVADKFIVTSLVAACTKLQALEEGRRLHEHLIITGFRTDIPLETALLQMYAKCGS 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L++A ++F+ M  K D+ +WSS+IS+Y   G+   A+ ++  M+  G  PN   F+  + 
Sbjct: 61  LDDAKRVFEGMEIK-DLFAWSSIISAYARAGRGEMAVVLYRRMIAEGVEPNVVTFACALG 119

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            C++   +A G  I+  +L       DV +  +L++M++K   ++  A KVF+ M  +N 
Sbjct: 120 GCASVAGLADGRAIHQRILASKVPQDDV-LQDSLLNMYLKCD-EMVEARKVFEGMKARNV 177

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
             +T MI+   Q G   +A+ LF  M  +    P+ +T + ++ A   L     G+++H 
Sbjct: 178 RSYTAMISAYVQAGEHAEALELFSRMSKVEAIEPNAYTFATILGAVEGLGNLEKGRKVHR 237

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
                G   +V V  +LV MY KC   GS  ++RKVFD M   NV+SWT++I  Y Q G 
Sbjct: 238 HLASRGFDTNVVVQNALVTMYGKC---GSPVEARKVFDSMTARNVISWTSMIAAYAQHGN 294

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             +EA+ LF  M    V P+  +F+S L AC  L   +   +++ H V         +  
Sbjct: 295 -PQEALNLFKRM---DVEPSGVSFSSALNACALLGALDEGREIH-HRVVEAHLASPQMET 349

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           SL+SMYAR G ++DAR+ F  +  ++  S N M+ A+ ++   ++A  +   +E  G+  
Sbjct: 350 SLLSMYARCGSLDDARRVFNRMKTRDAFSCNAMIAAFTQHGRKKQALRIYRRMEQEGIPA 409

Query: 488 SAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              TF S+L   S    +        + ++  G       Y  ++ +  R   +  A ++
Sbjct: 410 DGITFVSVLVACSHTSLVADCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRLGDAEEL 469

Query: 547 FKEME-DRNVISWTSMITGFAKHG 569
            + M    + ++W ++++G  +HG
Sbjct: 470 VETMPYQTDAVAWMTLLSGCKRHG 493



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 152/507 (29%), Positives = 248/507 (48%), Gaps = 56/507 (11%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           GR + A+     M  +G  P++ T++  L  C        G+ +H  +  SK+  + V+ 
Sbjct: 90  GRGEMAVVLYRRMIAEGVEPNVVTFACALGGCASVAGLADGRAIHQRILASKVPQDDVLQ 149

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-G 175
           +SL+++Y KC ++ EA K+F+ M   R++ S+++MIS+YV  G+  +A+ +F  M ++  
Sbjct: 150 DSLLNMYLKCDEMVEARKVFEGM-KARNVRSYTAMISAYVQAGEHAEALELFSRMSKVEA 208

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             PN Y F+ ++ A     N+  G  ++  L   G FD++V V  AL+ M+ K    +E 
Sbjct: 209 IEPNAYTFATILGAVEGLGNLEKGRKVHRHLASRG-FDTNVVVQNALVTMYGKCGSPVE- 266

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A KVFD MT +N + WT MI    Q G P++A+ LF  M +    P   + S  ++AC+ 
Sbjct: 267 ARKVFDSMTARNVISWTSMIAAYAQHGNPQEALNLFKRMDVE---PSGVSFSSALNACAL 323

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     G+++H   +   LA    +  SL+ MYA+C   GS+DD+R+VF+RM   +  S 
Sbjct: 324 LGALDEGREIHHRVVEAHLA-SPQMETSLLSMYARC---GSLDDARRVFNRMKTRDAFSC 379

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I  + Q  GR K+A++++  M Q  +  +  TF SVL AC +               
Sbjct: 380 NAMIAAFTQH-GRKKQALRIYRRMEQEGIPADGITFVSVLVACSH--------------- 423

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV-----SYNTMVDAYAKNLNS 470
                       SL++         D R  F+SL   + V      Y  MVD   ++   
Sbjct: 424 -----------TSLVA---------DCRDFFQSLVMDHGVVPLVEHYLCMVDVLGRSGRL 463

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
             A EL   +E     T A  + +LLSG    G + +GE+  AR +     +    Y  L
Sbjct: 464 GDAEEL---VETMPYQTDAVAWMTLLSGCKRHGDLNRGERA-ARKVFELAPAETLPYVFL 519

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVIS 557
            +MY+     + A +V KEME+R V +
Sbjct: 520 SNMYAAAKRFDDARRVRKEMEERGVTT 546


>gi|326522845|dbj|BAJ88468.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 776

 Score =  451 bits (1161), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/710 (33%), Positives = 398/710 (56%), Gaps = 25/710 (3%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML  G       +  ++  C     +     ++G ++K G   +D+ V  +L++++++ +
Sbjct: 67  MLRDGQTVQSAMYVPLLHRCVEAGGLGAARALHGHMVKTGT-AADMFVATSLVNVYMRCA 125

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                A ++FD M +KN V WT +IT  T    P  A+ +F++M+  G  P  +TL G++
Sbjct: 126 SS-RDARRLFDGMPDKNVVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGML 184

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           SACS       G+Q+H ++I+ G      +G SL  +Y K    G ++   + F    D 
Sbjct: 185 SACSAARRIDLGQQVHGYSIKYGADTITSMGNSLCRLYCK---SGDLESGLRAFKGTPDK 241

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           NV++WT +I+   +        + LF DM++G V PN FT  SV+  CG  LD ++ +QV
Sbjct: 242 NVITWTTMISSCAEDENYLDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQV 301

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
                K G   +  V NS + +Y R G  ++A + FE +   +++++N M+  YA+ ++S
Sbjct: 302 QAFCYKVGCEANLPVKNSTMYLYLRKGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDS 361

Query: 471 EK-----------AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            K           A +L  ++  + +    +TF+S+LS  S++ A+ +GEQIHA  IK+G
Sbjct: 362 AKDDLHARSRGFQALKLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTG 421

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             S+  + +AL++MY++C ++E A + F EM  R  ++WTSMI+G+++HG +  A+++F 
Sbjct: 422 CLSDVVVNSALVNMYNKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFE 481

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            M+  G +PN IT++++LSACS+AGL+ E  ++F  M +E+ I   ++HY CMVD+  R 
Sbjct: 482 DMVLSGARPNEITFVSLLSACSYAGLVEEAERYFDMMRNEYHIEPLVDHYGCMVDMFVRL 541

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L +A  FI+      +  +W + +  CR HG+ EL  +AA+ +LE  P+    ++LL 
Sbjct: 542 GRLDDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLLELKPKVIETYVLLL 601

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y S G W  VA +RK  K  ++      SWI   +KV+ F   + +HP+  E+Y  L+
Sbjct: 602 NMYISTGRWRDVARVRKLAKHEDVGVLRDRSWIAIRDKVYFFRADDMTHPQATELYQLLE 661

Query: 760 QLALKIKEFGYLPDTN-----FVLHELEEEQKV----QYLFQHSEKIAVAFGLISTSKSK 810
            L  K K  GY P  N     F   E ++++        +  HSE++AVA GL+ T    
Sbjct: 662 NLLEKAKAVGYEPYQNAPELLFDSKEGDDDKPAAAAGSLIKHHSERLAVALGLLETPPGA 721

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
            +RV KN+ +C DCH++IKY S++  REIV+RDS R H  KDG+CSC D+
Sbjct: 722 TVRVTKNITMCRDCHSSIKYFSLLANREIVVRDSKRLHKFKDGRCSCGDF 771



 Score =  251 bits (640), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 158/589 (26%), Positives = 304/589 (51%), Gaps = 29/589 (4%)

Query: 29  PPSSSPPFIA----QPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLL 84
           PP +S  F      Q ++++ L N  + H +  R   A   +  M + G       Y  L
Sbjct: 24  PPPTSAAFDKGTSYQRSSAQALENGRLEHESPPRPLDAQEAMG-MLRDGQTVQSAMYVPL 82

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L  C+ +      + +H  + ++    +  +  SL+++Y +C    +A ++F  M +K +
Sbjct: 83  LHRCVEAGGLGAARALHGHMVKTGTAADMFVATSLVNVYMRCASSRDARRLFDGMPDK-N 141

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           +V+W+++I+ +    +   A+ +FVEMLELG  P+ Y    ++ ACS    + +G  ++G
Sbjct: 142 VVTWTALITGHTLNSEPALALEVFVEMLELGRYPSHYTLGGMLSACSAARRIDLGQQVHG 201

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
           + +K G  D+   +G +L  ++ K S DLES  + F    +KN + WT MI+ C +    
Sbjct: 202 YSIKYGA-DTITSMGNSLCRLYCK-SGDLESGLRAFKGTPDKNVITWTTMISSCAEDENY 259

Query: 265 RD-AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
            D  + LFLDM+  G +P+ FTL+ V+S C      + GKQ+ ++  + G   ++ V  S
Sbjct: 260 LDLGLSLFLDMLEGGVMPNEFTLTSVMSLCGARLDMSLGKQVQAFCYKVGCEANLPVKNS 319

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ----------SGGRDKEAV 373
            + +Y +    G  D++ ++F+ M   ++++W A+I+GY Q          +  R  +A+
Sbjct: 320 TMYLYLR---KGETDEAMRLFEEMDSSSIITWNAMISGYAQIMDSAKDDLHARSRGFQAL 376

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
           KLF D+++ ++ P+ FTF+S+L  C  ++     EQ++ + +K G   D  V ++L++MY
Sbjct: 377 KLFRDLVRSELKPDLFTFSSILSVCSAMMALEQGEQIHANTIKTGCLSDVVVNSALVNMY 436

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            + G +E A KAF  +  +  V++ +M+  Y+++  S+ A +L  ++  +G   +  TF 
Sbjct: 437 NKCGSIECATKAFVEMPTRTPVTWTSMISGYSQHGRSQDAIQLFEDMVLSGARPNEITFV 496

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME 551
           SLLS  S  G + + E+ +  ++++ +     +  Y  ++ M+ R   ++ AF   K   
Sbjct: 497 SLLSACSYAGLVEEAER-YFDMMRNEYHIEPLVDHYGCMVDMFVRLGRLDDAFSFIKRTG 555

Query: 552 -DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLS 598
            + N   W+S++ G   HG    A     ++L   +KP  I TY+ +L+
Sbjct: 556 FEPNEAIWSSLVAGCRSHGNMELAFYAADRLLE--LKPKVIETYVLLLN 602


>gi|413920851|gb|AFW60783.1| hypothetical protein ZEAMMB73_487264 [Zea mays]
          Length = 770

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 240/703 (34%), Positives = 397/703 (56%), Gaps = 18/703 (2%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML  G       +  ++  C  T ++     ++G ++K G   +D+ V  +L++ +++  
Sbjct: 69  MLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGT-SADMFVATSLVNAYMRCG 127

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
              + A  +FD+M EKN V WT +IT  T      +A+ +F++M+ +G  P  +TL  ++
Sbjct: 128 AS-QDARSLFDQMPEKNVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYPSHYTLGAML 186

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           +ACS       G Q+H + I+        +G SL  MYAK    GS++ + + F  + D 
Sbjct: 187 NACSASNNADLGSQVHGYTIKYRALSITSIGNSLCRMYAK---SGSLESAMRAFRMVPDK 243

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           NV++WT +I+   +     +  + LF DM+   V PN FT  SV+  CG  LD N+ +QV
Sbjct: 244 NVITWTTMISACAEDENYTELGLTLFLDMLMDGVLPNEFTLTSVMSLCGTRLDLNLGKQV 303

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
                K G   +  V NS + +Y R G  ++A + FE + + +++++N M+  YA+ + +
Sbjct: 304 QAFCFKIGCQTNIPVKNSTMYLYLRKGETDEAMRFFEEMDDVSIITWNAMISGYAQIMET 363

Query: 471 EK-----------AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            K           A ++   ++ + +    +TF+S+LS  SS+ A+ +GEQIHA+ IK+G
Sbjct: 364 AKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMMALEQGEQIHAQTIKTG 423

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F S+  + +AL++MY++C  +E A + F EM  R +++WTSMI+G+++HG    A+++F 
Sbjct: 424 FLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMISGYSQHGRPQEAIQLFE 483

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            M   G++PN IT++ VLSACS+AGL  +   +F  M +E+ I   ++HY CMVD+  R 
Sbjct: 484 DMRFAGVRPNEITFVCVLSACSYAGLAEKAEHYFDMMKEEYKIEPIVDHYGCMVDMFVRL 543

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L +A  FIR      +  +W + +  CR HG+ EL  +AA+ ++E  P+    ++LL 
Sbjct: 544 GRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADRLIELRPKGIETYVLLL 603

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y S   W  VA +RK MK+  L      SWI   +KV+ F   + +H  + E+Y  L+
Sbjct: 604 NMYISNERWHDVARVRKLMKQEGLGVLMDRSWITIKDKVYFFKANDKTHELSDELYQLLE 663

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQK--VQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            L  K K  GY P  +  L + E+++K     +  HSE++AVA GL+ T     +RV KN
Sbjct: 664 NLLEKAKTIGYEPYQSAELSDSEDDKKPPAGSVRHHSERLAVALGLLQTPPGATVRVTKN 723

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           + +C DCH++IK+ S++  REIV+RDS R H  KDG+CSC D+
Sbjct: 724 ITMCRDCHSSIKFFSLLANREIVVRDSKRLHKFKDGRCSCGDF 766



 Score =  255 bits (652), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 168/620 (27%), Positives = 312/620 (50%), Gaps = 44/620 (7%)

Query: 5   SLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKA-I 63
           S+P+ A     S F  +  +    PP SS             + R I    +G   +A +
Sbjct: 3   SVPSVAVPVAASGFPAAGGADSRRPPPSS----VSAADKNNWNGRSIQAAQNGSTMEAPL 58

Query: 64  FTLDL-----MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
             LD+     M ++G       Y  LL  C+ + +    + +H  + ++    +  +  S
Sbjct: 59  RPLDVGEAMAMLREGKTVQSAMYVPLLHVCVETGSLGGARALHGHMVKTGTSADMFVATS 118

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           L++ Y +CG   +A  +F  M  K ++V+W+++I+ Y    + ++A+ +FVEMLE G  P
Sbjct: 119 LVNAYMRCGASQDARSLFDQMPEK-NVVTWTALITGYTVNSQLLEALEVFVEMLEAGRYP 177

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           + Y   A++ ACS + N  +G  ++G+ +K     S   +G +L  M+ K S  LESA +
Sbjct: 178 SHYTLGAMLNACSASNNADLGSQVHGYTIKYRAL-SITSIGNSLCRMYAK-SGSLESAMR 235

Query: 239 VFDKMTEKNTVGWTLMITRC------TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            F  + +KN + WT MI+ C      T+LG     + LFLDM++ G LP+ FTL+ V+S 
Sbjct: 236 AFRMVPDKNVITWTTMISACAEDENYTELG-----LTLFLDMLMDGVLPNEFTLTSVMSL 290

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C        GKQ+ ++  + G   ++ V  S + +Y +    G  D++ + F+ M D ++
Sbjct: 291 CGTRLDLNLGKQVQAFCFKIGCQTNIPVKNSTMYLYLR---KGETDEAMRFFEEMDDVSI 347

Query: 353 MSWTAIITGYVQ----------SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
           ++W A+I+GY Q          +  R  +A+K+F ++ +  + P+ FTF+S+L  C +++
Sbjct: 348 ITWNAMISGYAQIMETAKDDLHARSRGFQALKVFRNLKRSAMKPDLFTFSSILSVCSSMM 407

Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
                EQ++   +K G   D  V ++L++MY + G +EDA KAF  +  + LV++ +M+ 
Sbjct: 408 ALEQGEQIHAQTIKTGFLSDVVVNSALVNMYNKCGCIEDATKAFVEMSIRTLVTWTSMIS 467

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
            Y+++   ++A +L  ++   GV  +  TF  +LS  S  G   K E  +  ++K  ++ 
Sbjct: 468 GYSQHGRPQEAIQLFEDMRFAGVRPNEITFVCVLSACSYAGLAEKAEH-YFDMMKEEYKI 526

Query: 523 NHCI--YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFY 579
              +  Y  ++ M+ R   ++ AF   +    + N   W+S++ G   HG    A     
Sbjct: 527 EPIVDHYGCMVDMFVRLGRLDDAFAFIRRTGFEPNEAIWSSLVAGCRSHGNMELAFYAAD 586

Query: 580 KMLADGIKPNGI-TYIAVLS 598
           +++   ++P GI TY+ +L+
Sbjct: 587 RLIE--LRPKGIETYVLLLN 604


>gi|15222566|ref|NP_173907.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75172213|sp|Q9FRI5.1|PPR57_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g25360
 gi|11067273|gb|AAG28801.1|AC079374_4 hypothetical protein [Arabidopsis thaliana]
 gi|332192491|gb|AEE30612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 790

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 248/703 (35%), Positives = 384/703 (54%), Gaps = 74/703 (10%)

Query: 229 GSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
            S D+  A  VF+K  +  ++TV +  MIT  +       AI LF  M   GF PD FT 
Sbjct: 92  ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151

Query: 287 SGVVSACSELELFTSGK----QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV-DDSR 341
           + V++    L L    +    Q H+ A+++G      V  +LV +Y+KC    S+   +R
Sbjct: 152 ASVLAG---LALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRD-------------------------------K 370
           KVFD +L+ +  SWT ++TGYV++G  D                               +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+++   M+   +  + FT+ SV++AC       + +QV+ + ++R         NSL+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLV 327

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY-------------------------- 464
           S+Y + G+ ++AR  FE +  K+LVS+N ++  Y                          
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387

Query: 465 -----AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
                A+N   E+  +L   ++  G     Y F+  +   + +GA   G+Q HA+++K G
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F+S+    NALI+MY++C  VE A QVF+ M   + +SW ++I    +HG  A A++++ 
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +ML  GI+P+ IT + VL+ACSHAGL+ +G K+F SM   + I    +HYA ++DLL RS
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRS 567

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G  ++A   I S+P      +W   L  CRVHG+ ELG  AA+ +    P+    ++LLS
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLS 627

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N++A+ G WE VA +RK M++R + KE  CSWIE + +VH F V +TSHP+   +Y  L 
Sbjct: 628 NMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQ 687

Query: 760 QLALKIKEFGYLPDTNFVLHELEEE-QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
            L  +++  GY+PDT+FVLH++E +  K   L  HSEKIAVAFGL+       IR+FKNL
Sbjct: 688 DLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNL 747

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           R CGDCH   +++S V  R+I+LRD  RFHH ++G+CSC ++W
Sbjct: 748 RTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 145/608 (23%), Positives = 256/608 (42%), Gaps = 124/608 (20%)

Query: 75  HPDL-----DTYSLLLKSCI--RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +PDL     + Y+  L+ C+  R  +  L + VH  +     +P + ILN LI +Y K  
Sbjct: 4   NPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSS 63

Query: 128 DLNEANKIFKSMGNK--------------------------------RDIVSWSSMISSY 155
           +LN A ++F  +                                   RD V +++MI+ +
Sbjct: 64  ELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGF 123

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA---CSNTENVAIGHIIYGFLLKCGYF 212
            +      AI++F +M   GF P+ + F++V+      ++ E   +           GY 
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYI 183

Query: 213 DSDVCVGCALIDMFVKGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQ--------- 260
            S   V  AL+ ++ K +     L SA KVFD++ EK+   WT M+T   +         
Sbjct: 184 TS---VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEE 240

Query: 261 -----------------------LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
                                   G  ++A+ +   M+ SG   D FT   V+ AC+   
Sbjct: 241 LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           L   GKQ+H++ +R           SLV +Y KC   G  D++R +F++M   +++SW A
Sbjct: 301 LLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKC---GKFDEARAIFEKMPAKDLVSWNA 356

Query: 358 IITGYVQSG------------------------------GRDKEAVKLFSDMIQGQVAPN 387
           +++GYV SG                              G  +E +KLFS M +    P 
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            + F+  +K+C  L      +Q +   +K G       GN+LI+MYA+ G +E+AR+ F 
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
           ++   + VS+N ++ A  ++ +  +A ++  E+   G+     T  ++L+  S  G + +
Sbjct: 477 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ 536

Query: 508 GEQIHARI-----IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSM 561
           G +    +     I  G  ++H  Y  LI +  R      A  V + +  +     W ++
Sbjct: 537 GRKYFDSMETVYRIPPG--ADH--YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEAL 592

Query: 562 ITGFAKHG 569
           ++G   HG
Sbjct: 593 LSGCRVHG 600



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 91/283 (32%), Positives = 139/283 (49%), Gaps = 35/283 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N G  Q+A+  +  M   G   D  TY  ++++C  +    LGK VH+ + R + + +
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFS 319

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               NSL+SLY KCG  +EA  IF+ M  K D+VSW++++S YV+ G   +A  +F EM 
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMK 378

Query: 173 EL-------------------------------GFCPNEYCFSAVIRACSNTENVAIGHI 201
           E                                GF P +Y FS  I++C+       G  
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
            +  LLK G FDS +  G ALI M+ K  V +E A +VF  M   ++V W  +I    Q 
Sbjct: 439 YHAQLLKIG-FDSSLSAGNALITMYAKCGV-VEEARQVFRTMPCLDSVSWNALIAALGQH 496

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           G   +A+ ++ +M+  G  PDR TL  V++ACS   L   G++
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539



 Score =  103 bits (257), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 92/355 (25%), Positives = 151/355 (42%), Gaps = 91/355 (25%)

Query: 422 DDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           D     +++S Y  SG +  AR  FE   +  ++ V YN M+  ++ N +   A  L  +
Sbjct: 79  DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++  G     +TFAS+L+G + +    K   Q HA  +KSG      + NAL+S+YS+CA
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198

Query: 539 N----VEAAFQVFKEMEDRNVISWTSMITGFAKHG------------------------- 569
           +    + +A +VF E+ +++  SWT+M+TG+ K+G                         
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258

Query: 570 -------FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
                  F   ALE+  +M++ GI+ +  TY +V+ AC+ AGL+  G +        H  
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ-------VHAY 311

Query: 623 VQRMEHYA-----CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           V R E ++      +V L  + G   EA      MP + D++ W   L            
Sbjct: 312 VLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSG---------- 360

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
                                   Y S+GH      I K MKE+N++     SW+
Sbjct: 361 ------------------------YVSSGHIGEAKLIFKEMKEKNIL-----SWM 386



 Score = 66.2 bits (160), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 10/159 (6%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  ++ +     M ++G  P    +S  +KSC     +  G+  H+ L +   + +   
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSA 454

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+LI++Y+KCG + EA ++F++M    D VSW+++I++    G   +A+ ++ EML+ G
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
             P+      V+ ACS+   V  G           YFDS
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGR---------KYFDS 543



 Score = 49.3 bits (116), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 57/308 (18%)

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED------------------ 552
           +H  II  GF+    I N LI +Y + + +  A Q+F E+ +                  
Sbjct: 36  VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95

Query: 553 ---------------RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
                          R+ + + +MITGF+ +     A+ +F KM  +G KP+  T+ +VL
Sbjct: 96  ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155

Query: 598 SACSHAGLISEGWK-----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +  +   L+++  K     H  ++    G +  + +   +V +  +  S    L   R +
Sbjct: 156 AGLA---LVADDEKQCVQFHAAALKSGAGYITSVSN--ALVSVYSKCASSPSLLHSARKV 210

Query: 653 ---PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
               L  D   W T +     +G  +LG+   E +   D     A+  + + Y + G ++
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM--DDNMKLVAYNAMISGYVNRGFYQ 268

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
               + +RM           S IE D   +   +   +    L++  ++    L+ ++F 
Sbjct: 269 EALEMVRRMVS---------SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319

Query: 770 YLPDTNFV 777
           +  D + V
Sbjct: 320 FHFDNSLV 327


>gi|297819536|ref|XP_002877651.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297323489|gb|EFH53910.1| hypothetical protein ARALYDRAFT_485272 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1217

 Score =  451 bits (1160), Expect = e-124,   Method: Compositional matrix adjust.
 Identities = 243/629 (38%), Positives = 358/629 (56%), Gaps = 40/629 (6%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+ +A KVFD++ E+N +   +MI      G  R+ I++F  M      PD +T   V+ 
Sbjct: 90  DVATARKVFDEIPERNVIIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLK 149

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS       GK++H  A + GL+  + VG  LV MY KC   G + ++R V D M   +
Sbjct: 150 ACSCSGNIVIGKKIHGSATKVGLSSTLFVGNGLVSMYGKC---GFLSEARLVLDEMSRRD 206

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SW +++ GY Q+  R  +A+++  +M   +++ +  T AS+L A  N    NV     
Sbjct: 207 VVSWNSLVAGYAQNQ-RFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV----- 260

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
                               MY +          F  + +K+LVS+N M+  Y KN    
Sbjct: 261 --------------------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPV 292

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A EL   +E  G    A +  S+L       A+  G++IH  I +     N  + NALI
Sbjct: 293 EAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 352

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C  ++ A  VF+ M+ R+V+SWT+MI+ +   G    A+ +F KM   G+ P+ I
Sbjct: 353 DMYAKCGCLDRARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKMQDSGLVPDSI 412

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
            ++  L+ACSHAGL+ EG   F+ M D + I  R+EH ACMVDLLGR+G + EA +FI+ 
Sbjct: 413 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYKFIQE 472

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+  +  VW   LGACRVH +T++G  AA+ + +  P+    ++LLSN+YA AG WE V
Sbjct: 473 MPMEPNERVWGALLGACRVHSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 532

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
            NIR  MK + L K  G S +E +  +H F VG+ SHP++ EIY ELD L  K+KE GY+
Sbjct: 533 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSAEIYRELDVLVKKMKELGYV 592

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK---SKPIRVFKNLRVCGDCHTAI 828
           PD+   LH++EEE K  +L  HSEK+A+ F L++T +   +  IR+ KNLR+CGDCH A 
Sbjct: 593 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTEEEDSNNAIRITKNLRICGDCHVAA 652

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           K IS +T REI++RD+NRFH  + G CSC
Sbjct: 653 KLISQITSREIIIRDTNRFHVFRFGVCSC 681



 Score =  163 bits (412), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 139/513 (27%), Positives = 238/513 (46%), Gaps = 62/513 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+G  ++ I     M      PD  T+  +LK+C  S N  +GK +H   T+  L   
Sbjct: 116 YVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGSATKVGLSST 175

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N L+S+Y KCG L+EA  +   M ++RD+VSW+S+++ Y    +  DA+ +  EM 
Sbjct: 176 LFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVAGYAQNQRFDDALEVCREME 234

Query: 173 ELGFCPNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            +    +    ++++ A SNT  ENV                            M+VK  
Sbjct: 235 SVKISHDAGTMASLLPAVSNTTTENV----------------------------MYVK-- 264

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                   +F KM +K+ V W +MI    +   P +A+ L+  M   GF PD  +++ V+
Sbjct: 265 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSGMEADGFEPDAVSITSVL 317

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC +    + GK++H +  R  L  ++ +  +L+DMYAKC   G +D +R VF+ M   
Sbjct: 318 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC---GCLDRARDVFENMKSR 374

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVA 407
           +V+SWTA+I+ Y  S GR  +AV LFS M    + P+   F + L AC   G L +    
Sbjct: 375 DVVSWTAMISAYGFS-GRGCDAVALFSKMQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 433

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
            ++ T   K    L+      ++ +  R+G++++A K  + +  E N   +  ++ A   
Sbjct: 434 FKLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYKFIQEMPMEPNERVWGALLGACRV 491

Query: 467 NLNS-------EKAFELLHEIEDTGVGTS-AYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           + N+       +K F+L  E     V  S  Y  A      ++I  I K + +      S
Sbjct: 492 HSNTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 551

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
             E N  I+  L+   S   + E    +++E++
Sbjct: 552 NVEVNRIIHTFLVGDRSHPQSAE----IYRELD 580



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 179/387 (46%), Gaps = 48/387 (12%)

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           F L  V+    +L+     + +HS  I   L  +  +G  L+  YA       V  +RKV
Sbjct: 44  FMLGQVLDTYPDLKTL---RTVHSRIISEDLRYNSSLGVKLMRAYASLK---DVATARKV 97

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GN 400
           FD + + NV+    +I  YV +G   +E +++F  M    V P+H+TF  VLKAC   GN
Sbjct: 98  FDEIPERNVIIINVMIRSYVNNGFY-REGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGN 156

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           ++   + ++++  A K G +    VGN L+SMY + G + +AR   + +  +++VS+N++
Sbjct: 157 IV---IGKKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSL 213

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           V  YA+N   + A E+  E+E   +   A T ASLL   S+                   
Sbjct: 214 VAGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSN------------------- 254

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
                         +   NV     +F +M  ++++SW  MI  + K+     A+E++  
Sbjct: 255 --------------TTTENVMYVKDMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSG 300

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M ADG +P+ ++  +VL AC     +S G K      +   ++  +     ++D+  + G
Sbjct: 301 MEADGFEPDAVSITSVLPACGDTSALSLG-KKIHGYIERKKLIPNLLLENALIDMYAKCG 359

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGA 667
            L  A +   +M  S DV+ W   + A
Sbjct: 360 CLDRARDVFENMK-SRDVVSWTAMISA 385



 Score =  103 bits (257), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 83/343 (24%), Positives = 152/343 (44%), Gaps = 29/343 (8%)

Query: 399 GNLLDS----NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           G +LD+         V++  +      +  +G  L+  YA    +  ARK F+ + E+N+
Sbjct: 47  GQVLDTYPDLKTLRTVHSRIISEDLRYNSSLGVKLMRAYASLKDVATARKVFDEIPERNV 106

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +  N M+ +Y  N    +  ++   +    V    YTF  +L   S  G I  G++IH  
Sbjct: 107 IIINVMIRSYVNNGFYREGIQVFGTMCSCHVKPDHYTFPCVLKACSCSGNIVIGKKIHGS 166

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
             K G  S   + N L+SMY +C  +  A  V  EM  R+V+SW S++ G+A++     A
Sbjct: 167 ATKVGLSSTLFVGNGLVSMYGKCGFLSEARLVLDEMSRRDVVSWNSLVAGYAQNQRFDDA 226

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           LE+  +M +  I  +  T  ++L A S+    +E   + + M+ + G  + +  +  M+ 
Sbjct: 227 LEVCREMESVKISHDAGTMASLLPAVSNT--TTENVMYVKDMFFKMG-KKSLVSWNVMIG 283

Query: 635 LLGRSGSLTEALEFIRSMP---LSADVLVWRTFLGAC----------RVHGDTELGKHAA 681
           +  ++    EA+E    M       D +   + L AC          ++HG  E  K   
Sbjct: 284 VYMKNAMPVEAVELYSGMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIP 343

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
            ++LE           L ++YA  G  +   ++ + MK R+++
Sbjct: 344 NLLLEN---------ALIDMYAKCGCLDRARDVFENMKSRDVV 377


>gi|15239745|ref|NP_199702.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170778|sp|Q9FI80.1|PP425_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g48910
 gi|10177180|dbj|BAB10314.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|15810559|gb|AAL07167.1| putative selenium-binding protein [Arabidopsis thaliana]
 gi|332008359|gb|AED95742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 646

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 244/607 (40%), Positives = 350/607 (57%), Gaps = 50/607 (8%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-GSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           Q+H+  I++G   D      ++   A   +    +D + K+F++M   N  SW  II G+
Sbjct: 41  QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100

Query: 363 VQSGGRDKE--AVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            +S   DK   A+ LF +M+  + V PN FTF SVLKAC         +Q++  A+K G 
Sbjct: 101 SESD-EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159

Query: 420 ALDDCVGNSLISMYARSGRMEDAR------------------------------------ 443
             D+ V ++L+ MY   G M+DAR                                    
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219

Query: 444 -----KAFESLFEK----NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
                KA   LF+K    ++VS+NTM+  Y+ N   + A E+  E++   +  +  T  S
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   S +G++  GE +H     SG   +  + +ALI MYS+C  +E A  VF+ +   N
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           VI+W++MI GFA HG A  A++ F KM   G++P+ + YI +L+ACSH GL+ EG ++F 
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
            M    G+  R+EHY CMVDLLGRSG L EA EFI +MP+  D ++W+  LGACR+ G+ 
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           E+GK  A ++++  P D  A++ LSN+YAS G+W  V+ +R RMKE+++ K+ GCS I+ 
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
           D  +H+F V + SHPK  EI + L +++ K++  GY P T  VL  LEEE K   L  HS
Sbjct: 520 DGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHS 579

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           EKIA AFGLISTS  KPIR+ KNLR+C DCH++IK IS V  R+I +RD  RFHH +DG 
Sbjct: 580 EKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGS 639

Query: 855 CSCNDYW 861
           CSC DYW
Sbjct: 640 CSCMDYW 646



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 115/480 (23%), Positives = 211/480 (43%), Gaps = 97/480 (20%)

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYV--NRGKQVDAIHMFVEMLELGFC-PNEYCFS 184
           DL+ A+KIF  M  +R+  SW+++I  +   +  K + AI +F EM+   F  PN + F 
Sbjct: 74  DLDYAHKIFNQM-PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132

Query: 185 AVIRACSNTENVAIGHIIYGFLLK-------------------CGYF------------- 212
           +V++AC+ T  +  G  I+G  LK                   CG+              
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192

Query: 213 ------------DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
                       D ++ +   +ID +++   D ++A  +FDKM +++ V W  MI+  + 
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLG-DCKAARMLFDKMRQRSVVSWNTMISGYSL 251

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G  +DA+ +F +M      P+  TL  V+ A S L     G+ LH +A  +G+ +D  +
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           G +L+DMY+KC   G ++ +  VF+R+   NV++W+A+I G+    G+  +A+  F  M 
Sbjct: 312 GSALIDMYSKC---GIIEKAIHVFERLPRENVITWSAMINGFAIH-GQAGDAIDCFCKMR 367

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           Q  V P+   + ++L AC                                   +  G +E
Sbjct: 368 QAGVRPSDVAYINLLTAC-----------------------------------SHGGLVE 392

Query: 441 DARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
           + R+ F  +      E  +  Y  MVD   ++   ++A E    I +  +      + +L
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF---ILNMPIKPDDVIWKAL 449

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L      G +  G+++ A I+      +   Y AL +MY+   N     ++   M+++++
Sbjct: 450 LGACRMQGNVEMGKRV-ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508



 Score = 92.8 bits (229), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 12/283 (4%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           +  R K +   V+ N +I  Y + GD   A  +F  M  +R +VSW++MIS Y   G   
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKM-RQRSVVSWNTMISGYSLNGFFK 256

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           DA+ +F EM +    PN     +V+ A S   ++ +G  ++ +    G    DV +G AL
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSAL 315

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           IDM+ K  + +E A  VF+++  +N + W+ MI      G   DAI  F  M  +G  P 
Sbjct: 316 IDMYSKCGI-IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRT-GLALDV-CVGCSLVDMYAKCTVDGSVDDS 340
                 +++ACS   L   G++  S  +   GL   +   GC +VD+  +    G +D++
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC-MVDLLGR---SGLLDEA 430

Query: 341 RK-VFDRMLDHNVMSWTAIITGYVQSGGRD--KEAVKLFSDMI 380
            + + +  +  + + W A++      G  +  K    +  DM+
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473


>gi|358347043|ref|XP_003637572.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503507|gb|AES84710.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 833

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 261/765 (34%), Positives = 420/765 (54%), Gaps = 76/765 (9%)

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W+ +I   ++      A+ +F  M  L + P+ Y F  V +AC    N  +G  I+G ++
Sbjct: 94  WNQLIRHALHFNSPNTALRLFRRMKTLHWTPDHYTFPFVFKACGEISNFELGASIHGCVI 153

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK---NTVGWTLMITRCTQLGCP 264
           + G F+S+V V  A+I M+ K    +  A KVFD++  +   ++V W  +++  +    P
Sbjct: 154 RLG-FESNVFVCNAVISMYGKCKAVVH-ARKVFDELCYRGICDSVTWNSIVSVYSHCFVP 211

Query: 265 RDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             A+ LF +M +  G LPD   +  ++  C  L L   G+Q+H + +R+GL  DV VG +
Sbjct: 212 NVAVSLFREMTVGYGILPDTVGVVNILPVCGYLGLGLCGRQVHGFCVRSGLVEDVFVGNA 271

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG----------------- 366
           LVDMYAKC   G ++D+ KVF+RM   +V++W A++TGY Q+G                 
Sbjct: 272 LVDMYAKC---GKMEDANKVFERMRFKDVVTWNAMVTGYSQNGRFEDALSLFGKMREEKI 328

Query: 367 -----------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
                            G   EA+ +F  M   +  PN  T  S+L AC ++      ++
Sbjct: 329 ESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGCRCRPNVVTLMSLLSACASVGALLHGKE 388

Query: 410 VYTHAVK---RGRALDD----CVGNSLISMYARSGRMEDARKAFESLF--EKNLVSYNTM 460
            + ++VK   +G   DD     V N+LI MYA+   +E AR  F+ +   ++++V++  M
Sbjct: 389 THCYSVKFILKGEHNDDTDDLAVINALIDMYAKCKSLEVARAMFDEICPKDRDVVTWTVM 448

Query: 461 VDAYAKNLNSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           +  YA++ ++  A +L  E+   D  +  + +T + +L   + + A+  G+QIHA +++ 
Sbjct: 449 IGGYAQHGDANHALQLFSEMFKIDNCIVPNDFTISCVLMACARLAALKFGKQIHAYVLRR 508

Query: 519 GFESNHCIY--NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
               +  ++  N LI MYS+  +V+ A  VF  M  RN +SWTS++TG+  HG +  A  
Sbjct: 509 SRIDSDVLFVANCLIDMYSKSGDVDTAQVVFDSMSKRNAVSWTSLLTGYGMHGRSEDAFR 568

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M  + +  +GIT++ VL ACSH+G+             + G+   +EHYACMVDLL
Sbjct: 569 VFDEMRKEALVLDGITFLVVLYACSHSGM-------------DFGVDPGVEHYACMVDLL 615

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GR+G L EA+  I  MP+    +VW   L ACR+H + EL + AA+ +LE    +   + 
Sbjct: 616 GRAGRLGEAMRLINDMPIEPTPVVWIALLSACRIHSNEELAEFAAKKLLELKADNDGTYT 675

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YA+A  W+ VA I   MK   + K  G SW++    +  F+VG+ +H ++ +IY 
Sbjct: 676 LLSNIYANARRWKDVARIGYLMKRTGIKKIPGWSWVKGRKGMETFYVGDRTHLQSQKIYE 735

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            L  L  +IK        NF LH++++E+K   L +HSEK+A+A+ +++     PIR+ K
Sbjct: 736 TLADLIKRIK-------ANFSLHDVDDEEKGDQLSEHSEKLALAYAILTLPPGAPIRITK 788

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLR+CGD H+AI YISM+   EI+LRDS+RFH  K+G CSC  YW
Sbjct: 789 NLRICGDFHSAITYISMIVEHEIILRDSSRFHQFKNGSCSCKGYW 833



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 155/558 (27%), Positives = 264/558 (47%), Gaps = 76/558 (13%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  + K+C    NF LG  +H  + R   E N  + N++IS+Y KC  +  A K+
Sbjct: 124 PDHYTFPFVFKACGEISNFELGASIHGCVIRLGFESNVFVCNAVISMYGKCKAVVHARKV 183

Query: 136 FKSMGNKR--DIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSN 192
           F  +  +   D V+W+S++S Y +      A+ +F EM +  G  P+      ++  C  
Sbjct: 184 FDELCYRGICDSVTWNSIVSVYSHCFVPNVAVSLFREMTVGYGILPDTVGVVNILPVCGY 243

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                 G  ++GF ++ G  + DV VG AL+DM+ K    +E A KVF++M  K+ V W 
Sbjct: 244 LGLGLCGRQVHGFCVRSGLVE-DVFVGNALVDMYAKCG-KMEDANKVFERMRFKDVVTWN 301

Query: 253 LMITRCTQLGCPRDAIRLFLDM--------------ILSGFL------------------ 280
            M+T  +Q G   DA+ LF  M              ++SG+                   
Sbjct: 302 AMVTGYSQNGRFEDALSLFGKMREEKIESDVVTWSSVISGYAQRGFGCEAMDVFRQMCGC 361

Query: 281 ---PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL-------ALDVCVGCSLVDMYAK 330
              P+  TL  ++SAC+ +     GK+ H ++++  L         D+ V  +L+DMYAK
Sbjct: 362 RCRPNVVTLMSLLSACASVGALLHGKETHCYSVKFILKGEHNDDTDDLAVINALIDMYAK 421

Query: 331 CTVDGSVDDSRKVFDRML--DHNVMSWTAIITGYVQSGGRDKEAVKLFSDM--IQGQVAP 386
           C    S++ +R +FD +   D +V++WT +I GY Q G  +  A++LFS+M  I   + P
Sbjct: 422 CK---SLEVARAMFDEICPKDRDVVTWTVMIGGYAQHGDAN-HALQLFSEMFKIDNCIVP 477

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARK 444
           N FT + VL AC  L      +Q++ + ++R R   D   V N LI MY++SG ++ A+ 
Sbjct: 478 NDFTISCVLMACARLAALKFGKQIHAYVLRRSRIDSDVLFVANCLIDMYSKSGDVDTAQV 537

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F+S+ ++N VS+ +++  Y  +  SE AF +  E+    +     TF  +L   S  G 
Sbjct: 538 VFDSMSKRNAVSWTSLLTGYGMHGRSEDAFRVFDEMRKEALVLDGITFLVVLYACSHSG- 596

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
                      +  G +     Y  ++ +  R   +  A ++  +M  +   + W ++++
Sbjct: 597 -----------MDFGVDPGVEHYACMVDLLGRAGRLGEAMRLINDMPIEPTPVVWIALLS 645

Query: 564 GFAKHG------FAARAL 575
               H       FAA+ L
Sbjct: 646 ACRIHSNEELAEFAAKKL 663


>gi|90399180|emb|CAJ86042.1| H0723C07.12 [Oryza sativa Indica Group]
          Length = 886

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/704 (36%), Positives = 401/704 (56%), Gaps = 25/704 (3%)

Query: 174 LGFCPNEY--CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           LGF P E     + ++RA +   ++  G  ++  L+K G F SD  +   LIDM+ K   
Sbjct: 192 LGFLPMERRRMIADLLRASARGSSLRGGVQLHAALMKLG-FGSDTMLNNNLIDMYAKCG- 249

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L  A +VFD M E+N V WT ++      G  R+ +RLF +M  SG  P+ FTLS  + 
Sbjct: 250 KLHMAGEVFDGMPERNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLK 309

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC       +G Q+H   +RTG      V  SLV MY+K    G   D+R+VFD +   N
Sbjct: 310 ACGGGT--RAGVQIHGVCVRTGFEGHDVVANSLVVMYSKGRWTG---DARRVFDVIPSRN 364

Query: 352 VMSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQ 409
           + +W ++I+GY  +G GRD  ++ +F +M +     P+ FTFAS+LKAC  L  +    Q
Sbjct: 365 LATWNSMISGYAHAGQGRD--SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQ 422

Query: 410 VYTHAVKRG--RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           V+     RG   A +  +  +L+ +Y +  R+  A + F+ L  +N + + T++  +A+ 
Sbjct: 423 VHAAMAVRGVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQE 482

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              ++A  L      +GV    +  +S+++  +    + +G+Q+H    K+    +  + 
Sbjct: 483 GQVKEAMCLFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVA 542

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           N+L+ MY +C     A + F+EM  RNV+SWT+MI G  KHG    A+++F +M A+G++
Sbjct: 543 NSLVDMYLKCGLTGEAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVE 602

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            + + Y+A+LSACSH+GL+ E  ++F  +  +  +  + EHYACMVDLLGR+G L EA E
Sbjct: 603 ADEVAYLALLSACSHSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKE 662

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I SMP+   V VW+T L ACRVH D  +G+   +++L  D  +P  +++LSN+ A AG 
Sbjct: 663 LILSMPMEPTVGVWQTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGE 722

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH-VGETSHPKTLEIYAELDQLALKIK 766
           W     IR  M+ + L K+ GCSW E D +VH F+  G+ +HP+  +I   L ++  +++
Sbjct: 723 WRECQGIRGAMRRKGLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMR 782

Query: 767 E-FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI--------STSKSKPIRVFKN 817
           E  GY  D    LH+++EE +V+ L +HSE++AV   L+             + +RV+KN
Sbjct: 783 ERLGYSGDARCALHDVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKN 842

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LRVCGDCH  +K +S V  R +V+RD+NRFH  ++G CSC DYW
Sbjct: 843 LRVCGDCHEFLKGLSAVVRRVVVVRDANRFHRFQNGACSCRDYW 886



 Score =  201 bits (511), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 261/529 (49%), Gaps = 21/529 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL++  R  +   G  +H+ L +     ++++ N+LI +Y+KCG L+ A ++F  M  +R
Sbjct: 206 LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM-PER 264

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           ++VSW++++  +++ G+  + + +F EM   G  PNE+  SA ++AC       +   I+
Sbjct: 265 NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGVQ--IH 322

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G  ++ G+   DV V  +L+ M+ KG    + A +VFD +  +N   W  MI+     G 
Sbjct: 323 GVCVRTGFEGHDV-VANSLVVMYSKGRWTGD-ARRVFDVIPSRNLATWNSMISGYAHAGQ 380

Query: 264 PRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL--ALDVCV 320
            RD++ +F +M       PD FT + ++ ACS L     G Q+H+     G+  A +  +
Sbjct: 381 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 440

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +L+D+Y KC     +  + +VFD +   N + WT +I G+ Q  G+ KEA+ LF    
Sbjct: 441 AGALLDVYVKCH---RLPVAMQVFDGLERRNAIQWTTVIVGHAQE-GQVKEAMCLFRRFW 496

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              V  +    +SV+    +       +QV+ +  K    LD  V NSL+ MY + G   
Sbjct: 497 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 556

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +A + F  +  +N+VS+  M++   K+ +  +A +L  E++  GV      + +LLS  S
Sbjct: 557 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 616

Query: 501 SIGAIGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
             G + +  +  +RI +      ++ H  Y  ++ +  R   +  A ++   M  +  V 
Sbjct: 617 HSGLVDECRRYFSRICQDRRMRPKAEH--YACMVDLLGRAGELREAKELILSMPMEPTVG 674

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAG 604
            W ++++    H   A   E+   +LA DG  P  + Y+ + +  + AG
Sbjct: 675 VWQTLLSACRVHKDVAVGREVGDVLLAVDGDNP--VNYVMLSNILAEAG 721



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP- 111
           H   GR    +F  ++  +    PD  T++ LLK+C        G  VH+ +    + P 
Sbjct: 377 HAGQGRDSLLVFR-EMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 435

Query: 112 -NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            N+++  +L+ +Y KC  L  A ++F  +  +R+ + W+++I  +   G+  +A+ +F  
Sbjct: 436 SNAILAGALLDVYVKCHRLPVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVKEAMCLFRR 494

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
               G   + +  S+V+   ++   V  G  ++ +  K      DV V  +L+DM++K  
Sbjct: 495 FWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA-GLDVSVANSLVDMYLKCG 553

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           +  E+  + F +M  +N V WT MI    + G  R+AI LF +M   G   D      ++
Sbjct: 554 LTGEAGRR-FREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALL 612

Query: 291 SACS 294
           SACS
Sbjct: 613 SACS 616


>gi|414586388|tpg|DAA36959.1| TPA: hypothetical protein ZEAMMB73_269943 [Zea mays]
          Length = 643

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/629 (38%), Positives = 362/629 (57%), Gaps = 19/629 (3%)

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF--TLSGVVSACSELELFTSGKQLHSW 308
           W   I      G   DA+ LFL M  S         +L   + +C+ L L   G  LH+ 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRMRASAAPRSSVPASLPAALKSCAALGLSALGASLHAL 75

Query: 309 AIRTGLALDVCVGCSLVDMYAK--CT-----------VDGS---VDDSRKVFDRMLDHNV 352
           AIR+G   D     +L+++Y K  C+           V GS    +  RKVFD M++ +V
Sbjct: 76  AIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIERDV 135

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW  ++ G  + G R  EA+     M +    P+ FT ++VL       D     +V+ 
Sbjct: 136 VSWNTLVLGCAEEG-RHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHG 194

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            A + G   D  VG+SLI MYA   R + + K F++L  ++ + +N+++   A+N + E+
Sbjct: 195 FAFRNGFDSDVFVGSSLIDMYANCTRTDYSVKVFDNLPVRDHILWNSLLAGCAQNGSVEE 254

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  +   +   GV     TF+SL+    ++ ++  G+Q+HA +I  GFE N  I ++LI 
Sbjct: 255 ALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFISSSLID 314

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY +C  +  A  +F +M   +V+SWT+MI G+A HG A  AL +F +M     KPN IT
Sbjct: 315 MYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHIT 374

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++AVL+ACSHAGL+ +GWK+F+SM + +GIV  +EH+A + D LGR+G L EA  FI  M
Sbjct: 375 FLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYNFISKM 434

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
            +     VW T L ACRVH +T L +  A+ I+E +P+   +H++LSN+Y+++G W   A
Sbjct: 435 QIKPTASVWSTLLRACRVHKNTMLAEEVAKKIMELEPRSIGSHVVLSNMYSASGRWNEAA 494

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           ++R+ M+++ + K+  CSWIE  +K+H F   + SHP    I   L+  + ++   G++P
Sbjct: 495 HLRESMRKKGMKKDPACSWIEVKSKLHVFVAHDRSHPWYDRIIDALNAFSEQMAREGHVP 554

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           +T  V  ++EEE K   L  HSEK+A+ FG+IST     IRV KNLRVC DCHT  K+IS
Sbjct: 555 NTEDVFQDIEEEHKSYVLCGHSEKLAIVFGIISTPAGTKIRVMKNLRVCIDCHTVTKFIS 614

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +  REIV+RD+NRFHH KDG CSC D+W
Sbjct: 615 KLADREIVVRDANRFHHFKDGNCSCGDFW 643



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 126/474 (26%), Positives = 216/474 (45%), Gaps = 31/474 (6%)

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC---FSAVIRACSNTENVAIGHIIYG 204
           W+  I +    G   DA+ +F+ M      P         A +++C+     A+G  ++ 
Sbjct: 16  WAQQIRAAAAEGHFCDAVSLFLRM-RASAAPRSSVPASLPAALKSCAALGLSALGASLHA 74

Query: 205 FLLKCGYFDSDVCVGCALIDMFVK------------------GSVDLESAYKVFDKMTEK 246
             ++ G F +D     AL++++ K                   S   ES  KVFD+M E+
Sbjct: 75  LAIRSGAF-ADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGSSTAFESVRKVFDEMIER 133

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V W  ++  C + G   +A+     M   GF PD FTLS V+   +E      G ++H
Sbjct: 134 DVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVH 193

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            +A R G   DV VG SL+DMYA CT     D S KVFD +   + + W +++ G  Q+G
Sbjct: 194 GFAFRNGFDSDVFVGSSLIDMYANCT---RTDYSVKVFDNLPVRDHILWNSLLAGCAQNG 250

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
             + EA+ +F  M+Q  V P   TF+S++  CGNL      +Q++ + +  G   +  + 
Sbjct: 251 SVE-EALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVFIS 309

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           +SLI MY + G +  A   F+ +   ++VS+  M+  YA +  + +A  L   +E     
Sbjct: 310 SSLIDMYCKCGEISIAHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAK 369

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQ 545
            +  TF ++L+  S  G + KG +    +    G       + AL     R   ++ A+ 
Sbjct: 370 PNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHFAALADTLGRAGELDEAYN 429

Query: 546 VFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
              +M+ +   S W++++     H     A E+  K++   ++P  I    VLS
Sbjct: 430 FISKMQIKPTASVWSTLLRACRVHKNTMLAEEVAKKIME--LEPRSIGSHVVLS 481



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 109/335 (32%), Positives = 168/335 (50%), Gaps = 26/335 (7%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK--CGDLNEAN--------- 133
           LKSC       LG  +H+L  RS    +    N+L++LY K  C  L+            
Sbjct: 57  LKSCAALGLSALGASLHALAIRSGAFADRFTANALLNLYCKVPCSYLDSTGVAIVDVPGS 116

Query: 134 --------KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
                   K+F  M  +RD+VSW++++      G+  +A+    +M   GF P+ +  S 
Sbjct: 117 STAFESVRKVFDEM-IERDVVSWNTLVLGCAEEGRHHEALGFVRKMCREGFRPDSFTLST 175

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+   +   +V  G  ++GF  + G FDSDV VG +LIDM+       + + KVFD +  
Sbjct: 176 VLPIFAECADVKRGLEVHGFAFRNG-FDSDVFVGSSLIDMYAN-CTRTDYSVKVFDNLPV 233

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           ++ + W  ++  C Q G   +A+ +F  M+ +G  P   T S ++  C  L     GKQL
Sbjct: 234 RDHILWNSLLAGCAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQL 293

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H++ I  G   +V +  SL+DMY KC   G +  +  +FD+M   +V+SWTA+I GY   
Sbjct: 294 HAYVICGGFEDNVFISSSLIDMYCKC---GEISIAHCIFDKMSSPDVVSWTAMIMGYALH 350

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           G   +EA+ LF  M  G   PNH TF +VL AC +
Sbjct: 351 GPA-REALVLFERMELGNAKPNHITFLAVLTACSH 384



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 182/404 (45%), Gaps = 51/404 (12%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +GR  +A+  +  M ++G  PD  T S +L       +   G  VH    R+  + +  +
Sbjct: 148 EGRHHEALGFVRKMCREGFRPDSFTLSTVLPIFAECADVKRGLEVHGFAFRNGFDSDVFV 207

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            +SLI +Y+ C   + + K+F ++   RD + W+S+++     G   +A+ +F  ML+ G
Sbjct: 208 GSSLIDMYANCTRTDYSVKVFDNL-PVRDHILWNSLLAGCAQNGSVEEALGIFRRMLQAG 266

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P    FS++I  C N  ++  G  ++ +++ CG F+ +V +  +LIDM+ K   ++  
Sbjct: 267 VRPVPVTFSSLIPVCGNLASLRFGKQLHAYVI-CGGFEDNVFISSSLIDMYCKCG-EISI 324

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A+ +FDKM+  + V WT MI      G  R+A+ LF  M L    P+  T   V++ACS 
Sbjct: 325 AHCIFDKMSSPDVVSWTAMIMGYALHGPAREALVLFERMELGNAKPNHITFLAVLTACSH 384

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                                                  G VD   K F  M +H  +  
Sbjct: 385 A--------------------------------------GLVDKGWKYFKSMSNHYGIVP 406

Query: 356 T----AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           T    A +   +   G   EA    S M   Q+ P    ++++L+AC    ++ +AE+V 
Sbjct: 407 TLEHFAALADTLGRAGELDEAYNFISKM---QIKPTASVWSTLLRACRVHKNTMLAEEVA 463

Query: 412 THAVK-RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
              ++   R++   V   L +MY+ SGR  +A    ES+ +K +
Sbjct: 464 KKIMELEPRSIGSHV--VLSNMYSASGRWNEAAHLRESMRKKGM 505



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 67/213 (31%), Positives = 101/213 (47%), Gaps = 19/213 (8%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G V++A+     M Q G  P   T+S L+  C    +   GK +H+ +     E N  
Sbjct: 248 QNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPVCGNLASLRFGKQLHAYVICGGFEDNVF 307

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           I +SLI +Y KCG+++ A+ IF  M +  D+VSW++MI  Y   G   +A+ +F E +EL
Sbjct: 308 ISSSLIDMYCKCGEISIAHCIFDKMSSP-DVVSWTAMIMGYALHGPAREALVLF-ERMEL 365

Query: 175 GFC-PNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMF 226
           G   PN   F AV+ ACS+   V  G          YG +    +F        AL D  
Sbjct: 366 GNAKPNHITFLAVLTACSHAGLVDKGWKYFKSMSNHYGIVPTLEHF-------AALADTL 418

Query: 227 VKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
            +   +L+ AY    KM  K T   W+ ++  C
Sbjct: 419 GRAG-ELDEAYNFISKMQIKPTASVWSTLLRAC 450


>gi|296082284|emb|CBI21289.3| unnamed protein product [Vitis vinifera]
          Length = 581

 Score =  450 bits (1158), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 224/552 (40%), Positives = 338/552 (61%), Gaps = 34/552 (6%)

Query: 343 VFDRMLDH-NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           +F++ +D  NV SW ++I    +SG    EA++ FS M +  + PN  TF   +K+C  L
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGD-SVEALRAFSSMRKLSLKPNRSTFPCAIKSCSAL 89

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR------------------ 443
           LD +   Q +  A+  G   D  V ++L+ MY++ G + DAR                  
Sbjct: 90  LDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTLFDEISHRNIVSWTSMI 149

Query: 444 -------------KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSA 489
                        + F+ + E++++S+N+++  YA+N  S ++ E+ H  ++D  +  +A
Sbjct: 150 TGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINYNA 209

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            T +++L   +  G+   G+ IH ++IK G ESN  +  ++I MY +C  VE A + F  
Sbjct: 210 VTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAFDR 269

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M ++NV SW++M+ G+  HG A  ALE+FY+M   G+KPN IT+++VL+ACSHAGL+ EG
Sbjct: 270 MREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLEEG 329

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
           W  F++M  E  +   +EHY CMVDLLGR+G L EA + I+ M L  D +VW   LGACR
Sbjct: 330 WHWFKAMSHEFDVEPGVEHYGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGALLGACR 389

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
           +H + +LG+ +A  + E DP++   ++LLSN+YA AG WE V  +R  MK   L+K  G 
Sbjct: 390 MHKNVDLGEISARKLFELDPKNCGYYVLLSNIYADAGRWEDVERMRILMKNSGLVKPPGF 449

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQY 789
           S ++   +VH F VG+  HP+  +IY  L++L++K++E GY+PD   VLH++  E+K   
Sbjct: 450 SLVDIKGRVHVFLVGDREHPQHEKIYEYLEKLSMKLQEVGYVPDMTSVLHDVGHEEKEMV 509

Query: 790 LFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHH 849
           L  HSEK+AVAFG+++T     I + KNLRVCGDCHTAIK+IS +  REIV+RDS RFHH
Sbjct: 510 LRVHSEKLAVAFGIMNTVPGTTIHIIKNLRVCGDCHTAIKFISKIVDREIVVRDSKRFHH 569

Query: 850 IKDGKCSCNDYW 861
            +DG CSC DYW
Sbjct: 570 FRDGLCSCGDYW 581



 Score =  157 bits (396), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 181/368 (49%), Gaps = 45/368 (12%)

Query: 239 VFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +F+K  +K N   W  +I    + G   +A+R F  M      P+R T    + +CS L 
Sbjct: 31  LFNKYVDKTNVFSWNSVIAELARSGDSVEALRAFSSMRKLSLKPNRSTFPCAIKSCSALL 90

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              SG+Q H  A+  G   D+ V  +LVDMY+KC   G + D+R +FD +   N++SWT+
Sbjct: 91  DLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKC---GELRDARTLFDEISHRNIVSWTS 147

Query: 358 IITGYVQS------------------------------GGRDKEAVKLFSDMIQ-GQVAP 386
           +ITGYVQ+                               G   E++++F  M++ G++  
Sbjct: 148 MITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESMEIFHRMVKDGEINY 207

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N  T ++VL AC +     + + ++   +K G   +  VG S+I MY + G++E ARKAF
Sbjct: 208 NAVTLSAVLLACAHSGSQRLGKCIHDQVIKMGLESNVFVGTSIIDMYCKCGKVEMARKAF 267

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           + + EKN+ S++ MV  Y  + ++++A E+ +E+   GV  +  TF S+L+  S  G + 
Sbjct: 268 DRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYITFVSVLAACSHAGLLE 327

Query: 507 KG-----EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTS 560
           +G        H   ++ G E     Y  ++ +  R   ++ AF + K M+ R + + W +
Sbjct: 328 EGWHWFKAMSHEFDVEPGVEH----YGCMVDLLGRAGYLKEAFDLIKGMKLRPDFVVWGA 383

Query: 561 MITGFAKH 568
           ++     H
Sbjct: 384 LLGACRMH 391



 Score =  125 bits (313), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/330 (29%), Positives = 147/330 (44%), Gaps = 68/330 (20%)

Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQ 161
           +L  +   + N    NS+I+  ++ GD                                 
Sbjct: 30  TLFNKYVDKTNVFSWNSVIAELARSGD--------------------------------S 57

Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
           V+A+  F  M +L   PN   F   I++CS   ++  G   +   L  G F+ D+ V  A
Sbjct: 58  VEALRAFSSMRKLSLKPNRSTFPCAIKSCSALLDLHSGRQAHQQALIFG-FEPDLFVSSA 116

Query: 222 LIDMFVK---------------------------GSV---DLESAYKVFDKMTEKNTVGW 251
           L+DM+ K                           G V   D   A +VFD M E++ + W
Sbjct: 117 LVDMYSKCGELRDARTLFDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISW 176

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAI 310
             +I    Q G   +++ +F  M+  G +  +  TLS V+ AC+       GK +H   I
Sbjct: 177 NSIIAVYAQNGMSTESMEIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVI 236

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           + GL  +V VG S++DMY KC   G V+ +RK FDRM + NV SW+A++ GY    G  K
Sbjct: 237 KMGLESNVFVGTSIIDMYCKC---GKVEMARKAFDRMREKNVKSWSAMVAGYGMH-GHAK 292

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           EA+++F +M    V PN+ TF SVL AC +
Sbjct: 293 EALEVFYEMNMAGVKPNYITFVSVLAACSH 322



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/403 (25%), Positives = 178/403 (44%), Gaps = 77/403 (19%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+   +KSC    + H G+  H        EP+  + ++L+ +YSKCG+L +A  +
Sbjct: 74  PNRSTFPCAIKSCSALLDLHSGRQAHQQALIFGFEPDLFVSSALVDMYSKCGELRDARTL 133

Query: 136 FKSMGNK------------------------------RDIVSWSSMISSYVNRGKQVDAI 165
           F  + ++                              RD++SW+S+I+ Y   G   +++
Sbjct: 134 FDEISHRNIVSWTSMITGYVQNDDAHRALRVFDGMAERDVISWNSIIAVYAQNGMSTESM 193

Query: 166 HMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
            +F  M++ G    N    SAV+ AC+++ +  +G  I+  ++K G  +S+V VG ++ID
Sbjct: 194 EIFHRMVKDGEINYNAVTLSAVLLACAHSGSQRLGKCIHDQVIKMG-LESNVFVGTSIID 252

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K    +E A K FD+M EKN   W+ M+      G  ++A+ +F +M ++G  P+  
Sbjct: 253 MYCKCG-KVEMARKAFDRMREKNVKSWSAMVAGYGMHGHAKEALEVFYEMNMAGVKPNYI 311

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T   V++ACS   L   G     W        DV  G   V+ Y  C VD          
Sbjct: 312 TFVSVLAACSHAGLLEEGWH---WFKAMSHEFDVEPG---VEHYG-CMVD---------- 354

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
                             +   G  KEA  L   M   ++ P+   + ++L AC    + 
Sbjct: 355 -----------------LLGRAGYLKEAFDLIKGM---KLRPDFVVWGALLGACRMHKNV 394

Query: 405 NVAEQVYTHAVKRGRALD--DCVGNSLIS-MYARSGRMEDARK 444
           ++ E     + ++   LD  +C    L+S +YA +GR ED  +
Sbjct: 395 DLGEI----SARKLFELDPKNCGYYVLLSNIYADAGRWEDVER 433


>gi|225441187|ref|XP_002266244.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 722

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/680 (33%), Positives = 390/680 (57%), Gaps = 44/680 (6%)

Query: 222 LIDMF-VKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
           LI  F + GS D L+ +  +F ++   N   W  MI   ++   PR+AI L++ MI  G 
Sbjct: 47  LISFFSLLGSKDGLDHSRLLFSQIDCPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGI 106

Query: 280 LP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
            P + FT   ++++C+ L     G ++HS  I+ G   D+ V  +L+ +Y   +V G+++
Sbjct: 107 APPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLY---SVFGNLN 163

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +R +FD  L  +++S+  +I GY +   + + A+ LF +M    + P+ FTF ++   C
Sbjct: 164 LARTLFDESLVRDLVSYNTMIKGYAEVN-QPESALCLFGEMQNSGILPDEFTFVALFSVC 222

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCV--------------------------------- 425
             L + NV +Q++    K  R++D  +                                 
Sbjct: 223 SVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAA 282

Query: 426 -GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
             +S++  YAR G +  ARK F  + E++++S+  M+  Y++     +A EL  E+E  G
Sbjct: 283 AWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALG 342

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAA 543
           +     T  ++LS  + +GA   G++++ + I++G F  N  +  A++ MY++C ++++A
Sbjct: 343 IKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSA 402

Query: 544 FQVFKEMED--RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            ++F+ +    +    + SMI G A+HG    A+ +F ++++ G+KP+ +T++ VL AC 
Sbjct: 403 LEIFRRVGKNMKTGFVFNSMIAGLAQHGLGETAITVFRELISTGLKPDEVTFVGVLCACG 462

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+GLI EG K F SM++ +GI  +MEHY CMVDLLGR G L EA + ++ MP  A+ ++W
Sbjct: 463 HSGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIW 522

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           R  L ACR HG+ ++G+ A + +LE + Q  A ++LLSN+ A A  WE    +RK M++ 
Sbjct: 523 RALLSACRTHGNVKIGEIAGQKLLEMEAQHGARYVLLSNILADANQWEEARQVRKVMEDH 582

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + K  G S+IE    +H+F   + SHP+  EI   L  +A+++K  GY+P+T  V+ ++
Sbjct: 583 GIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAGYVPNTAQVMFDI 642

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           +EE+K   +  HSEK+A+AFGL+  S +  IR+ KNLR+C DCH A K +S + GREI +
Sbjct: 643 DEEEKESVVSYHSEKLALAFGLMYCSPTDTIRIVKNLRICADCHKAFKLVSEIYGREITV 702

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+ RFHH ++G CSC D+W
Sbjct: 703 RDTMRFHHFRNGSCSCMDFW 722



 Score =  195 bits (496), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 132/432 (30%), Positives = 213/432 (49%), Gaps = 41/432 (9%)

Query: 283 RFTLSGVVSAC--SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           RF L    S C     + F  G Q+H+  I  GL   +     L+  ++       +D S
Sbjct: 4   RFLLENPSSLCLLESCKSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHS 63

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACG 399
           R +F ++   N+  W  +I GY +S    +EA+ L+  MI +G   PN+FTF  +L +C 
Sbjct: 64  RLLFSQIDCPNLFMWNTMIRGYSRSD-NPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCA 122

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L       +V++H +K G   D  V N+LI +Y+  G +  AR  F+    ++LVSYNT
Sbjct: 123 RLSSLEPGHEVHSHIIKHGFESDLFVRNALIHLYSVFGNLNLARTLFDESLVRDLVSYNT 182

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS- 518
           M+  YA+    E A  L  E++++G+    +TF +L S  S +     G+QIHA++ K+ 
Sbjct: 183 MIKGYAEVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNL 242

Query: 519 -GFESNHCIYNALISM--------------------------------YSRCANVEAAFQ 545
              +SN  + +A++ M                                Y+RC  +  A +
Sbjct: 243 RSIDSNILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARK 302

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F  M +R+VISWT+MI+G+++ G  + ALE+F +M A GIKP+ +T +AVLSAC+  G 
Sbjct: 303 LFNHMHERDVISWTAMISGYSQAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGA 362

Query: 606 ISEGWKHFRSMYDEHGIV-QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV-LVWRT 663
              G K     Y E+G+  Q     A ++D+  + GS+  ALE  R +  +     V+ +
Sbjct: 363 FDLG-KRLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRVGKNMKTGFVFNS 421

Query: 664 FLGACRVHGDTE 675
            +     HG  E
Sbjct: 422 MIAGLAQHGLGE 433



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 147/580 (25%), Positives = 287/580 (49%), Gaps = 51/580 (8%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG--DLNEANKIFKSMGN 141
           LL+SC   ++F  G  +H+    + L      ++ LIS +S  G  D  + +++  S  +
Sbjct: 15  LLESC---KSFKQGLQIHAQTIVNGLHHQIFSISRLISFFSLLGSKDGLDHSRLLFSQID 71

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGH 200
             ++  W++MI  Y       +AI +++ M+  G  P N + F  ++ +C+   ++  GH
Sbjct: 72  CPNLFMWNTMIRGYSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGH 131

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            ++  ++K G F+SD+ V  ALI ++ V G+++L  A  +FD+   ++ V +  MI    
Sbjct: 132 EVHSHIIKHG-FESDLFVRNALIHLYSVFGNLNL--ARTLFDESLVRDLVSYNTMIKGYA 188

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD-- 317
           ++  P  A+ LF +M  SG LPD FT   + S CS L     GKQ+H+   +   ++D  
Sbjct: 189 EVNQPESALCLFGEMQNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSN 248

Query: 318 VCVGCSLVDMYAKCTVD-----------------------------GSVDDSRKVFDRML 348
           + +  ++VDMYAKC +                              G ++ +RK+F+ M 
Sbjct: 249 ILLKSAIVDMYAKCGLINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMH 308

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + +V+SWTA+I+GY Q+ G+  EA++LF +M    + P+  T  +VL AC  L   ++ +
Sbjct: 309 ERDVISWTAMISGYSQA-GQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGK 367

Query: 409 QVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVS---YNTMVDAY 464
           ++Y   ++ G    + +   +++ MYA+ G ++ A + F  +  KN+ +   +N+M+   
Sbjct: 368 RLYHQYIENGVFNQNTILTAAVMDMYAKCGSIDSALEIFRRV-GKNMKTGFVFNSMIAGL 426

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESN 523
           A++   E A  +  E+  TG+     TF  +L      G I +G+++   +  + G +  
Sbjct: 427 AQHGLGETAITVFRELISTGLKPDEVTFVGVLCACGHSGLIEEGKKLFESMFNAYGIKPQ 486

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
              Y  ++ +  R   +E A+ + ++M  + N + W ++++    HG   +  EI  + L
Sbjct: 487 MEHYGCMVDLLGRYGCLEEAYDLVQKMPFEANSVIWRALLSACRTHG-NVKIGEIAGQKL 545

Query: 583 ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            +    +G  Y+ + +  + A    E  +  R + ++HGI
Sbjct: 546 LEMEAQHGARYVLLSNILADANQWEEA-RQVRKVMEDHGI 584



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 157/592 (26%), Positives = 266/592 (44%), Gaps = 99/592 (16%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y  +D   +  +  + ++ +    P+  T+  LL SC R  +   G  VHS + +   E 
Sbjct: 85  YSRSDNPREAIVLYMSMIAKGIAPPNNFTFPFLLNSCARLSSLEPGHEVHSHIIKHGFES 144

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  + N+LI LYS  G+LN A  +F      RD+VS+++MI  Y    +   A+ +F EM
Sbjct: 145 DLFVRNALIHLYSVFGNLNLARTLFDE-SLVRDLVSYNTMIKGYAEVNQPESALCLFGEM 203

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGS 230
              G  P+E+ F A+   CS      +G  I+  + K     DS++ +  A++DM+ K  
Sbjct: 204 QNSGILPDEFTFVALFSVCSVLNEPNVGKQIHAQVYKNLRSIDSNILLKSAIVDMYAKCG 263

Query: 231 V-------------------------------DLESAYKVFDKMTEKNTVGWTLMITRCT 259
           +                               ++  A K+F+ M E++ + WT MI+  +
Sbjct: 264 LINIAERVFSTMGTSKSAAAWSSMVCGYARCGEINVARKLFNHMHERDVISWTAMISGYS 323

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL-ALDV 318
           Q G   +A+ LF +M   G  PD  TL  V+SAC+ L  F  GK+L+   I  G+   + 
Sbjct: 324 QAGQCSEALELFKEMEALGIKPDEVTLVAVLSACARLGAFDLGKRLYHQYIENGVFNQNT 383

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS---WTAIITGYVQSGGRDKEAVKL 375
            +  +++DMYAKC   GS+D + ++F R +  N+ +   + ++I G  Q  G  + A+ +
Sbjct: 384 ILTAAVMDMYAKC---GSIDSALEIFRR-VGKNMKTGFVFNSMIAGLAQH-GLGETAITV 438

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F ++I   + P+  TF  VL ACG+                                   
Sbjct: 439 FRELISTGLKPDEVTFVGVLCACGH----------------------------------- 463

Query: 436 SGRMEDARKAFESLF-----EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           SG +E+ +K FES+F     +  +  Y  MVD   +    E+A++L+ ++       ++ 
Sbjct: 464 SGLIEEGKKLFESMFNAYGIKPQMEHYGCMVDLLGRYGCLEEAYDLVQKMP---FEANSV 520

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV-EAAFQVFKE 549
            + +LLS   + G +  GE    ++++   E+ H     L+S     AN  E A QV K 
Sbjct: 521 IWRALLSACRTHGNVKIGEIAGQKLLE--MEAQHGARYVLLSNILADANQWEEARQVRKV 578

Query: 550 MED---RNVISWTSMITGFAKHGFAA--------RALEIFYKMLADGIKPNG 590
           MED   R    W+ +  G A H F A        + +E+  K +A  +K  G
Sbjct: 579 MEDHGIRKPPGWSYIELGGAIHRFVASDKSHPQGKEIELMLKDMAMRLKSAG 630


>gi|356575510|ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Glycine max]
          Length = 618

 Score =  450 bits (1157), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 226/584 (38%), Positives = 360/584 (61%), Gaps = 10/584 (1%)

Query: 282 DRFT-LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           DR + L  ++  C++      G+  H+  IR GL +D+     L++MY+KC++   VD +
Sbjct: 41  DRVSNLHYLLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSL---VDSA 97

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           RK F+ M   +++SW  +I G +     D+EA+KL   M +     N FT +SVL  C  
Sbjct: 98  RKKFNEMPVKSLVSWNTVI-GALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCA- 155

Query: 401 LLDSNVAEQVYTHAVKRGRALD-DC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
                + E +  HA     A+D +C VG +L+ +YA+   ++DA + FES+ EKN V+++
Sbjct: 156 -FKCAILECMQLHAFSIKAAIDSNCFVGTALLHVYAKCSSIKDASQMFESMPEKNAVTWS 214

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           +M+  Y +N   E+A  +    +  G     +  +S +S  + +  + +G+Q+HA   KS
Sbjct: 215 SMMAGYVQNGFHEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKS 274

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKE-MEDRNVISWTSMITGFAKHGFAARALEI 577
           GF SN  + ++LI MY++C  +  A+ VF+  +E R+++ W +MI+GFA+H  A  A+ +
Sbjct: 275 GFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFARHARAPEAMIL 334

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F KM   G  P+ +TY+ VL+ACSH GL  EG K+F  M  +H +   + HY+CM+D+LG
Sbjct: 335 FEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSVLHYSCMIDILG 394

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G + +A + I  MP +A   +W + L +C+++G+ E  + AA+ + E +P +   HIL
Sbjct: 395 RAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFAEIAAKYLFEMEPNNAGNHIL 454

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           L+N+YA+   W+ VA  RK ++E ++ KE G SWIE  NK+H F VGE +HP+  +IYA+
Sbjct: 455 LANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNKIHSFTVGERNHPQIDDIYAK 514

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           LD L +++K+  Y  DT+  LH++EE +K   L  HSEK+A+ FGL+   +  PIR+ KN
Sbjct: 515 LDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKLAITFGLMCLPRDIPIRIIKN 574

Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LR+CGDCHT +K +S  T REI++RD+NRFHH KDG CSC ++W
Sbjct: 575 LRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSCGEFW 618



 Score =  162 bits (409), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/319 (31%), Positives = 176/319 (55%), Gaps = 8/319 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL+ C ++R+   G+  H+ + R  LE + +  N LI++YSKC  ++ A K F  M  K 
Sbjct: 49  LLQLCAKTRSSMGGRACHAQIIRIGLEMDILTSNMLINMYSKCSLVDSARKKFNEMPVK- 107

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW+++I +     +  +A+ + ++M   G   NE+  S+V+  C+    +     ++
Sbjct: 108 SLVSWNTVIGALTQNAEDREALKLLIQMQREGTPFNEFTISSVLCNCAFKCAILECMQLH 167

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
            F +K    DS+  VG AL+ ++ K S  ++ A ++F+ M EKN V W+ M+    Q G 
Sbjct: 168 AFSIKAA-IDSNCFVGTALLHVYAKCS-SIKDASQMFESMPEKNAVTWSSMMAGYVQNGF 225

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ +F +  L GF  D F +S  VSAC+ L     GKQ+H+ + ++G   ++ V  S
Sbjct: 226 HEEALLIFRNAQLMGFDQDPFMISSAVSACAGLATLIEGKQVHAISHKSGFGSNIYVSSS 285

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           L+DMYAKC   G + ++  VF  +L+  +++ W A+I+G+ +   R  EA+ LF  M Q 
Sbjct: 286 LIDMYAKC---GCIREAYLVFQGVLEVRSIVLWNAMISGFARH-ARAPEAMILFEKMQQR 341

Query: 383 QVAPNHFTFASVLKACGNL 401
              P+  T+  VL AC ++
Sbjct: 342 GFFPDDVTYVCVLNACSHM 360



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 83/167 (49%), Gaps = 2/167 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK VH++  +S    N  + +SLI +Y+KCG + EA  +F+ +   R IV W++MIS + 
Sbjct: 264 GKQVHAISHKSGFGSNIYVSSSLIDMYAKCGCIREAYLVFQGVLEVRSIVLWNAMISGFA 323

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              +  +A+ +F +M + GF P++  +  V+ ACS+      G   +  +++       V
Sbjct: 324 RHARAPEAMILFEKMQQRGFFPDDVTYVCVLNACSHMGLHEEGQKYFDLMVRQHNLSPSV 383

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRCTQLG 262
                +ID+  +  + +  AY + ++M    T   W  ++  C   G
Sbjct: 384 LHYSCMIDILGRAGL-VHKAYDLIERMPFNATSSMWGSLLASCKIYG 429


>gi|224091821|ref|XP_002309359.1| predicted protein [Populus trichocarpa]
 gi|222855335|gb|EEE92882.1| predicted protein [Populus trichocarpa]
          Length = 605

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 234/609 (38%), Positives = 359/609 (58%), Gaps = 5/609 (0%)

Query: 254 MITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
           MI+   +  C  D+IR+F DM+L +G   D  T+  V+ A +EL+    G Q+   AI+ 
Sbjct: 1   MISGFVKNSCFEDSIRVFGDMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKC 60

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G    V +   L+ +++KC   G V+ +R +F  +   +++S  A+I+G+    G  +++
Sbjct: 61  GFYSHVSLLTGLISLFSKC---GEVEIARLLFGEIRKKDLISCNAMISGFT-CNGETEDS 116

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           V+LF +++      +  T   ++        S +   ++   VK G      V  +L ++
Sbjct: 117 VRLFKELLSSGERVSSSTIVGLIPVYSPFGHSYLCNCIHGFCVKLGIVSHSSVSTALTTV 176

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y R   M  AR+ F+   EK L S+N M+    +N  ++ A  L   ++   V  +  T 
Sbjct: 177 YCRLNEMIFARQLFDESAEKTLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTV 236

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S+LS  + IGA+  GE +H+ I  + FESN  +  ALI MY++C ++  A ++F  M +
Sbjct: 237 TSILSACAQIGALSLGEWVHSLIKSNRFESNVYVSTALIDMYAKCGSITVARELFDLMPE 296

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           +N ++W +MI+G+  HG    AL++FY ML+  +KP G+T+++VL ACSHAGL+ EG   
Sbjct: 297 KNEVTWNAMISGYGLHGHGQEALKLFYDMLSSSVKPTGLTFLSVLYACSHAGLVKEGDGI 356

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F +M  + G     EHYACMVD+LGR+G L +ALEFI++MP+     VW   LGAC +H 
Sbjct: 357 FHTMVHDFGFEPLAEHYACMVDILGRAGQLKKALEFIKAMPVEPGPPVWGALLGACMIHK 416

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           DT L   A+E + E DP++   ++L+SN+Y+    +   A++R+  K++ L K  GC+ I
Sbjct: 417 DTNLAHVASEKLFELDPENIGYYVLMSNIYSVERKYPQAASVRQVAKKKRLAKTPGCTLI 476

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E     H F  G+ SHP++  IYAELD+L  K+ E G+  +T  VLH+LEEE+K   +  
Sbjct: 477 EIGQVPHVFTSGDQSHPQSKAIYAELDKLTGKMTEAGFQTETTTVLHDLEEEEKELTMKV 536

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSEK+A+AFGLIST     IR+ KNLRVC DCH   K++S +T R IV+RD+NRFHH KD
Sbjct: 537 HSEKLAIAFGLISTEPGAEIRIIKNLRVCLDCHNWTKFLSKITKRVIVVRDANRFHHFKD 596

Query: 853 GKCSCNDYW 861
           G CSC DYW
Sbjct: 597 GLCSCGDYW 605



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 106/332 (31%), Positives = 175/332 (52%), Gaps = 7/332 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           D++   G   DL T   +L +    +   LG  +  L  +     +  +L  LISL+SKC
Sbjct: 20  DMVLGNGPRFDLTTVIAVLPAVAELQELKLGMQILCLAIKCGFYSHVSLLTGLISLFSKC 79

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G++  A  +F  +  K+D++S ++MIS +   G+  D++ +F E+L  G   +      +
Sbjct: 80  GEVEIARLLFGEI-RKKDLISCNAMISGFTCNGETEDSVRLFKELLSSGERVSSSTIVGL 138

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           I   S   +  + + I+GF +K G   S   V  AL  ++ + + ++  A ++FD+  EK
Sbjct: 139 IPVYSPFGHSYLCNCIHGFCVKLGIV-SHSSVSTALTTVYCRLN-EMIFARQLFDESAEK 196

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
               W  MI+ CTQ G    AI LF  M  +   P+  T++ ++SAC+++   + G+ +H
Sbjct: 197 TLASWNAMISGCTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVH 256

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           S         +V V  +L+DMYAKC   GS+  +R++FD M + N ++W A+I+GY    
Sbjct: 257 SLIKSNRFESNVYVSTALIDMYAKC---GSITVARELFDLMPEKNEVTWNAMISGYGLH- 312

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           G  +EA+KLF DM+   V P   TF SVL AC
Sbjct: 313 GHGQEALKLFYDMLSSSVKPTGLTFLSVLYAC 344



 Score = 95.1 bits (235), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/209 (30%), Positives = 107/209 (51%), Gaps = 5/209 (2%)

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           +L   +H    +  +  +S +  +L ++Y +  ++  A ++F     K  + SW++MIS 
Sbjct: 149 YLCNCIHGFCVKLGIVSHSSVSTALTTVYCRLNEMIFARQLFDESAEK-TLASWNAMISG 207

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
               G    AI +F  M +    PN    ++++ AC+    +++G  ++  L+K   F+S
Sbjct: 208 CTQNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHS-LIKSNRFES 266

Query: 215 DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +V V  ALIDM+ K GS+ +  A ++FD M EKN V W  MI+     G  ++A++LF D
Sbjct: 267 NVYVSTALIDMYAKCGSITV--ARELFDLMPEKNEVTWNAMISGYGLHGHGQEALKLFYD 324

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSG 302
           M+ S   P   T   V+ ACS   L   G
Sbjct: 325 MLSSSVKPTGLTFLSVLYACSHAGLVKEG 353



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 46/149 (30%), Positives = 77/149 (51%), Gaps = 1/149 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G    AI     M +   +P+  T + +L +C +     LG+ VHSL+  ++ E N  
Sbjct: 210 QNGLTDAAISLFQTMQKNNVNPNPVTVTSILSACAQIGALSLGEWVHSLIKSNRFESNVY 269

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +LI +Y+KCG +  A ++F  M  K + V+W++MIS Y   G   +A+ +F +ML  
Sbjct: 270 VSTALIDMYAKCGSITVARELFDLMPEKNE-VTWNAMISGYGLHGHGQEALKLFYDMLSS 328

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIY 203
              P    F +V+ ACS+   V  G  I+
Sbjct: 329 SVKPTGLTFLSVLYACSHAGLVKEGDGIF 357


>gi|302785251|ref|XP_002974397.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
 gi|300157995|gb|EFJ24619.1| hypothetical protein SELMODRAFT_101239 [Selaginella moellendorffii]
          Length = 679

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/680 (36%), Positives = 382/680 (56%), Gaps = 44/680 (6%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           VI++C+    +A G  I+  + + G   SDV V   L+ M+ K GS  LE A  VF+   
Sbjct: 40  VIQSCARLGALAEGRRIHQLMRRVG-LGSDVYVSNHLVMMYGKCGS--LEEARLVFEATP 96

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE-LELFTSGK 303
            KN   WT++IT C Q G  ++A+ LF +M+  G  P   + +  ++ACS   E   +G+
Sbjct: 97  AKNVFSWTILITVCAQHGRSQEALALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGR 156

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            LH+   R G    V    SLV MY+KC   GS+++S + F+ M + N +SW A+I  + 
Sbjct: 157 ALHALLRRYGFQDAVVATTSLVSMYSKC---GSLEESMRTFESMTEPNAVSWNAMIAAFA 213

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           +   R  EA++    M           F   ++AC +++                     
Sbjct: 214 EHR-RGLEALRTLQKM-----------FLEGIRACSDVV--------------------- 240

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            VG +L++MYA+   + DA  AF  L E N++++N ++ AY ++   ++A EL   +   
Sbjct: 241 -VGTTLVNMYAKCSGLHDANAAFVKLQEPNIITWNVLISAYVQHCCFKEAMELFRRMLLL 299

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-IYNALISMYSRCANVEA 542
           G+     TF ++L       A+  G  IHA + +    SNH  + N +++MY +C +++ 
Sbjct: 300 GLEMDEVTFINILGACCVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQD 359

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA-CS 601
           A  +FK M   +VI+W +MI  + +HG  + AL  +  M  +G+ P+  TY++V+ A C+
Sbjct: 360 AEAMFKSMSQPDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVIDASCA 419

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           +AGL  E   +F SM  +HG+     HY CMV+ LG++G L++A   I+ MP   DVL W
Sbjct: 420 NAGLPEEAHAYFVSMQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTW 479

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            +FL  CR HGD + GK AA+  +  DP+    ++ L+ ++A AG ++  + IRK M +R
Sbjct: 480 TSFLANCRSHGDMKRGKLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLDR 539

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + K AG S I+    V++F  G+ S+P++ EI+ EL +L  ++K  GY PD   V H++
Sbjct: 540 GIRKNAGRSIIKLGTSVYEFTAGDQSNPRSKEIFDELKRLDKEMKSAGYDPDMAHVAHDV 599

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           E  QK   LF HSE++A+AFG+ISTS   P+R+ KNLRVCGDCHT  K  S +T REI++
Sbjct: 600 EAGQKEPLLFAHSERLAIAFGIISTSPGTPLRIMKNLRVCGDCHTMTKLTSKITRREIIV 659

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RDSNRFHH K+G CSC D+W
Sbjct: 660 RDSNRFHHFKNGSCSCKDFW 679



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 161/598 (26%), Positives = 276/598 (46%), Gaps = 90/598 (15%)

Query: 46  LSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT 105
           LS  L      G++  AI  L    QK    DL     +++SC R      G+ +H L+ 
Sbjct: 6   LSTLLSKRQQLGQIAAAIDAL----QKRKDADLKECVRVIQSCARLGALAEGRRIHQLMR 61

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           R  L  +  + N L+ +Y KCG L EA  +F++   K ++ SW+ +I+     G+  +A+
Sbjct: 62  RVGLGSDVYVSNHLVMMYGKCGSLEEARLVFEATPAK-NVFSWTILITVCAQHGRSQEAL 120

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACS-NTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
            +F EML+ G  P+   F+A I ACS   E +  G  ++  L + G+ D+ V    +L+ 
Sbjct: 121 ALFYEMLKQGIQPHSVSFTAAINACSAGPEFLPAGRALHALLRRYGFQDA-VVATTSLVS 179

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           M+ K GS  LE + + F+ MTE N V W  MI    +     +A+R    M L G     
Sbjct: 180 MYSKCGS--LEESMRTFESMTEPNAVSWNAMIAAFAEHRRGLEALRTLQKMFLEG----- 232

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
                 + ACS                      DV VG +LV+MYAKC+    + D+   
Sbjct: 233 ------IRACS----------------------DVVVGTTLVNMYAKCS---GLHDANAA 261

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F ++ + N+++W  +I+ YVQ     KEA++LF  M+   +  +  TF ++L AC     
Sbjct: 262 FVKLQEPNIITWNVLISAYVQHCCF-KEAMELFRRMLLLGLEMDEVTFINILGAC----- 315

Query: 404 SNVAEQVYTHAVKRGRALDDCV------------GNSLISMYARSGRMEDARKAFESLFE 451
                     A++ GRA+  CV             N +++MY + G ++DA   F+S+ +
Sbjct: 316 ------CVPVALEDGRAIHACVREHPLASNHAPLENVILNMYGKCGSLQDAEAMFKSMSQ 369

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            +++++NTM+ AY ++ ++ +A      +++ GV    YT+ S++   +S    G  E+ 
Sbjct: 370 PDVIAWNTMIAAYGQHGHTSEALRFYELMQEEGVVPDDYTYVSVID--ASCANAGLPEEA 427

Query: 512 HARIIKSGFESNHCI------YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
           HA  +    + +H +      Y  ++    +   +  A  + + M  + +V++WTS +  
Sbjct: 428 HAYFVS--MQQDHGVRPGGGHYGCMVESLGKAGRLSDAETLIQCMPFEPDVLTWTSFLAN 485

Query: 565 FAKHGFAARALEIFYKMLADG---IKPNGIT-YIAVLSACSHAGLISEGWKHFRSMYD 618
              HG   R      K+ A G   I P   T Y+A+    + AG   E  +  + M D
Sbjct: 486 CRSHGDMKRG-----KLAAKGAIRIDPEASTGYVALARIHADAGDFQEASRIRKLMLD 538


>gi|297836116|ref|XP_002885940.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331780|gb|EFH62199.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 944

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/733 (33%), Positives = 424/733 (57%), Gaps = 14/733 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N+V  N++IS Y K GDL+ A  +F +M + R +V+W+ ++  Y       +A  +F +M
Sbjct: 74  NTVSTNTMISGYVKMGDLSSARHLFDAMPD-RTVVTWTILMGWYAGNNHFDEAFKLFRQM 132

Query: 172 LELGFCPNEYCFSAVIRACSN-TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
                 P+   F+ ++  C++     A+G + + F +K G FD+++ +   + ++ +K  
Sbjct: 133 CRSCTLPDYVTFTTLLPGCNDAVPQNAVGQV-HAFAVKLG-FDTNLFL--TVCNVLLKSY 188

Query: 231 VD---LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
            +   L+ A  +F+++ +K++V +  +IT   + G   +AI LFL M  SG  P  FT S
Sbjct: 189 CEVRRLDLACVLFEEILDKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFS 248

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           GV+ A   L  F  G+QLH  ++ TG + D  VG  ++  Y+K      V ++R +F+ M
Sbjct: 249 GVLKAVVGLHDFALGQQLHGLSVTTGFSRDASVGNQILHFYSK---HDRVLETRNLFNEM 305

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            + + +S+  +I+ Y Q+  + +E++ LF +M        +F FA++L    NL    V 
Sbjct: 306 PELDFVSYNVVISSYSQAE-QYEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVG 364

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            QV+  A+         VGNSL+ MYA+    ++A   F+SL +++ VS+  ++  Y + 
Sbjct: 365 RQVHCQAIVATADSILHVGNSLVDMYAKCEMFDEAELIFKSLSQRSTVSWTALISGYVQK 424

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
                  +L  ++    +     TFA++L  ++   ++  G+Q+HA II+SG   N    
Sbjct: 425 GLHGAGLKLFTKMRGANLRADQSTFATVLKASAGFASLLLGKQLHAFIIRSGNLENVFSG 484

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           + L+ MY++C +++ A QVF+EM DRN +SW ++I+ +A +G    A+  F KM+  G++
Sbjct: 485 SGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAYADNGDGEAAIGAFTKMIQSGLQ 544

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+ ++ + VL ACSH G + +G + F++M   +GI  + +HYACM+DLLGR+G   EA +
Sbjct: 545 PDSVSILGVLIACSHCGFVEQGTEFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEK 604

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASAG 706
            +  MP   D ++W + L ACR++ +  L + AAE +   +  +D AA++ +SN+YA+AG
Sbjct: 605 LMDEMPFEPDEIMWSSVLNACRIYKNQSLAERAAEQLFSMEKLRDAAAYVSMSNIYAAAG 664

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            WE V +++K M+ER + K    SW+E ++K+H F   + +HP   EI  ++++L  +I+
Sbjct: 665 KWENVRHVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVKKINELTTEIE 724

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
             GY PDT+ V+ +++E+ K++ L  HSE++AVAF LIST +  PI V KNLR C DCH 
Sbjct: 725 REGYKPDTSSVVQDIDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCHA 784

Query: 827 AIKYISMVTGREI 839
           AIK IS +  R I
Sbjct: 785 AIKLISKIVKRVI 797



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 123/438 (28%), Positives = 224/438 (51%), Gaps = 26/438 (5%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DG   +AI     M Q G+ P   T+S +LK+ +   +F LG+ +H L   +    ++ +
Sbjct: 222 DGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQLHGLSVTTGFSRDASV 281

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N ++  YSK   + E   +F  M  + D VS++ +ISSY    +  +++++F EM  +G
Sbjct: 282 GNQILHFYSKHDRVLETRNLFNEM-PELDFVSYNVVISSYSQAEQYEESLNLFREMQCMG 340

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
           F    + F+ ++   +N  ++ +G  ++   +     DS + VG +L+DM+ K  +  + 
Sbjct: 341 FDRRNFPFATMLSIAANLSSLQVGRQVHCQAI-VATADSILHVGNSLVDMYAKCEM-FDE 398

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +F  +++++TV WT +I+   Q G     ++LF  M  +    D+ T + V+ A + 
Sbjct: 399 AELIFKSLSQRSTVSWTALISGYVQKGLHGAGLKLFTKMRGANLRADQSTFATVLKASAG 458

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 GKQLH++ IR+G   +V  G  LVDMYAKC   GS+ D+ +VF+ M D N +SW
Sbjct: 459 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC---GSIKDAVQVFEEMPDRNAVSW 515

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I+ Y  +G   + A+  F+ MIQ  + P+  +   VL AC +       EQ      
Sbjct: 516 NALISAYADNGD-GEAAIGAFTKMIQSGLQPDSVSILGVLIACSH---CGFVEQ----GT 567

Query: 416 KRGRALDDCVGNS--------LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--- 463
           +  +A+    G +        ++ +  R+GR  +A K  + + FE + + ++++++A   
Sbjct: 568 EFFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI 627

Query: 464 YAKNLNSEKAFELLHEIE 481
           Y     +E+A E L  +E
Sbjct: 628 YKNQSLAERAAEQLFSME 645



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 80/339 (23%), Positives = 147/339 (43%), Gaps = 35/339 (10%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +++ +  I+TG   D C     V+   +    G V  + KV+D M   N +S   +I+GY
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLR---RGQVSAALKVYDEMPHKNTVSTNTMISGY 85

Query: 363 VQSGGRDK------------------------------EAVKLFSDMIQGQVAPNHFTFA 392
           V+ G                                  EA KLF  M +    P++ TF 
Sbjct: 86  VKMGDLSSARHLFDAMPDRTVVTWTILMGWYAGNNHFDEAFKLFRQMCRSCTLPDYVTFT 145

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRG--RALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           ++L  C + +  N   QV+  AVK G    L   V N L+  Y    R++ A   FE + 
Sbjct: 146 TLLPGCNDAVPQNAVGQVHAFAVKLGFDTNLFLTVCNVLLKSYCEVRRLDLACVLFEEIL 205

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           +K+ V++NT++  Y K+    +A  L  ++  +G   S +TF+ +L     +     G+Q
Sbjct: 206 DKDSVTFNTLITGYEKDGLYTEAIHLFLKMRQSGHKPSDFTFSGVLKAVVGLHDFALGQQ 265

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H   + +GF  +  + N ++  YS+   V     +F EM + + +S+  +I+ +++   
Sbjct: 266 LHGLSVTTGFSRDASVGNQILHFYSKHDRVLETRNLFNEMPELDFVSYNVVISSYSQAEQ 325

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
              +L +F +M   G       +  +LS  ++   +  G
Sbjct: 326 YEESLNLFREMQCMGFDRRNFPFATMLSIAANLSSLQVG 364



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 4/108 (3%)

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
            ++ ARIIK+GF ++ C  N  +    R   V AA +V+ EM  +N +S  +MI+G+ K 
Sbjct: 29  RRVDARIIKTGFNTDTCRSNFTVEDLLRRGQVSAALKVYDEMPHKNTVSTNTMISGYVKM 88

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           G  + A  +F  M    +    +T+  ++   +      E +K FR M
Sbjct: 89  GDLSSARHLFDAMPDRTV----VTWTILMGWYAGNNHFDEAFKLFRQM 132


>gi|297832866|ref|XP_002884315.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330155|gb|EFH60574.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 861

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/761 (33%), Positives = 435/761 (57%), Gaps = 37/761 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +G   K+I     M + G   D  T++++LK C    +  LG  +H ++ R   + +
Sbjct: 113 YLQNGETLKSIEVFVDMGRAGTEFDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGCDTD 172

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V  ++L+ +Y+K     E+ ++F+ +  K   VSWS++I+  V       A+  F EM 
Sbjct: 173 VVAASALLDMYAKGKRFVESLRVFQGIPEKNS-VSWSAIIAGCVQNNLLSLALKFFKEMQ 231

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           ++    ++  +++V+R+C+    + +G  ++   LK   F +D  V  A +DM+ K   +
Sbjct: 232 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCD-N 289

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A  +FDK    N   +  MIT  +Q      A+ LF  ++ SG   D  +LSGV  A
Sbjct: 290 MQDAQILFDKSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 349

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ ++  + G Q++  AI++ L+LDVCV  + +DMY KC    ++ ++ +VFD M   + 
Sbjct: 350 CALVKGLSEGLQIYDLAIKSSLSLDVCVANAAIDMYGKCQ---ALAEAFRVFDEMRRRDA 406

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQV 410
           +SW AII  + Q+G +  E + LF  M++ ++ P+ FTF SVLKAC  G+L       ++
Sbjct: 407 VSWNAIIAAHEQNG-KGYETLFLFVSMLRSRIEPDEFTFGSVLKACTGGSL---GYGMEI 462

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN----------------- 453
           ++  VK G A +  VG SLI MY++ G +E+A K     F++                  
Sbjct: 463 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRL 522

Query: 454 ---LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
               VS+N+++  Y     SE A  L   + + G+    +T+A++L   +++ + G G+Q
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 582

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IHA++IK   +S+  I + L+ MYS+C ++  +  +F++   R+ ++W +MI G+A HG 
Sbjct: 583 IHAQVIKKELQSDVYISSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK 642

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+++F +M+ + IKPN +T+I++L AC+H GLI +G ++F  M  ++G+  ++ HY+
Sbjct: 643 GEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 702

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH-GDTELGKHAAEMILEQDP 689
            MVD+LG+SG +  ALE IR MP  AD ++WRT LG C +H  + E+ + A   +L  DP
Sbjct: 703 NMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 762

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
           QD +A+ LLSN+YA AG WE V+++R+ M+   L KE GCSW+E  +++H F VG+ +HP
Sbjct: 763 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 822

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLH-ELEEEQKVQY 789
           +  EIY EL  +  ++K F    D++FV   E+EEE +  Y
Sbjct: 823 RWEEIYEELGLIYSEMKPF---DDSSFVPGVEVEEEDQWCY 860



 Score =  253 bits (647), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 182/652 (27%), Positives = 317/652 (48%), Gaps = 64/652 (9%)

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG------- 140
           C +     LGK  H+ +  S   P + +LN L+ +Y+   D   A+ +F  M        
Sbjct: 16  CAKQGALELGKQAHAHMILSGFRPTTFVLNCLLQVYTNSRDFVSASMVFDRMPLRDVVSW 75

Query: 141 NK-----------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           NK                       RD+VSW+SM+S Y+  G+ + +I +FV+M   G  
Sbjct: 76  NKMINGYAKSNNMVKASFFFNMMPVRDVVSWNSMLSGYLQNGETLKSIEVFVDMGRAGTE 135

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
            +   F+ +++ CS  E+ ++G  I+G +++ G  D+DV    AL+DM+ KG   +ES  
Sbjct: 136 FDGRTFAIILKVCSCLEDTSLGMQIHGVVVRVGC-DTDVVAASALLDMYAKGKRFVES-L 193

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +VF  + EKN+V W+ +I  C Q      A++ F +M        +   + V+ +C+ L 
Sbjct: 194 RVFQGIPEKNSVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALS 253

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               G QLH+ A+++  A D  V  + +DMYAKC    ++ D++ +FD+  + N  S+ A
Sbjct: 254 ELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCD---NMQDAQILFDKSENLNRQSYNA 310

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +ITGY Q     K A+ LF  ++   +  +  + + V +AC  +   +   Q+Y  A+K 
Sbjct: 311 MITGYSQEEHGFK-ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYDLAIKS 369

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
             +LD CV N+ I MY +   + +A + F+ +  ++ VS+N ++ A+ +N    +   L 
Sbjct: 370 SLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLF 429

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
             +  + +    +TF S+L   +  G++G G +IH+ I+KSG  SN  +  +LI MYS+C
Sbjct: 430 VSMLRSRIEPDEFTFGSVLKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKC 488

Query: 538 ANVEAAFQV----------------FKEMEDRNV----ISWTSMITGFAKHGFAARALEI 577
             +E A ++                 ++M ++ +    +SW S+I+G+     +  A  +
Sbjct: 489 GMIEEAEKIHSRFFQRTNVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQML 548

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGW-KHFRSMYDEHGIVQRMEHYACMVDLL 636
           F +M+  GI P+  TY  VL  C  A L S G  K   +   +  +   +   + +VD+ 
Sbjct: 549 FTRMMEMGITPDKFTYATVLDTC--ANLASAGLGKQIHAQVIKKELQSDVYISSTLVDMY 606

Query: 637 GRSGSLTEA-LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE-MILE 686
            + G L ++ L F +S  L  D + W   +     HG  E      E MILE
Sbjct: 607 SKCGDLHDSRLMFEKS--LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 656


>gi|224140095|ref|XP_002323422.1| predicted protein [Populus trichocarpa]
 gi|222868052|gb|EEF05183.1| predicted protein [Populus trichocarpa]
          Length = 574

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/559 (38%), Positives = 353/559 (63%), Gaps = 4/559 (0%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+H+    TG+  D+ V   L+ M   C     +  +  +F++M + + +SW+ +I G+
Sbjct: 20  KQVHAQVTTTGIIHDLIVANKLLYM---CAKHKDLVTAHLLFNKMEERDPVSWSVMIGGF 76

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V++G  ++   + F ++I+    P++F+   V+KAC + +   +   +++  +K G  LD
Sbjct: 77  VKNGDYER-CFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLD 135

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
           + V ++L+ MYA+ G +++A++ F+ + +K+LV+   M+  YA+     +++ L  ++  
Sbjct: 136 NFVCSTLVDMYAKCGMIDNAKQLFDRMPKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR 195

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G         ++++  + +GA+ K   +H  +    +  +  +  A+I MY++C ++++
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDS 255

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           + ++F  ME +NVISW++MI  +  HG    ALE+F+ ML  GI PN IT+I++L ACSH
Sbjct: 256 SREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSH 315

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGL+ +G + F  M   +G+   ++HY CMVDLLGR+G L +AL  I +M +  D  +W 
Sbjct: 316 AGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENMEVEKDEGIWC 375

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
            FLGACR+H   +L + AA+++L    Q+P  +ILLSN+YA+AG W+ VA IR  M +R 
Sbjct: 376 AFLGACRIHRQVDLAEKAAKLLLSLQTQNPGHYILLSNIYANAGRWKDVAKIRNLMAKRR 435

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           L K  G +WIE DN +++F  G+ SH ++ EIY  L  L+ K++  GY+PDTN VLH+++
Sbjct: 436 LKKIPGYTWIEVDNIIYRFGAGDNSHLRSNEIYEMLKSLSQKLESAGYVPDTNSVLHDVD 495

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE K+  L  HSEK+A+AFGLI+T    PIR+ KNLRVCGDCH+  K +S +T R+I++R
Sbjct: 496 EEVKLGILHAHSEKLAIAFGLIATPDGTPIRITKNLRVCGDCHSFCKLVSAITQRDIIVR 555

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+NRFHH K+G CSC DYW
Sbjct: 556 DANRFHHFKEGICSCGDYW 574



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/371 (32%), Positives = 207/371 (55%), Gaps = 14/371 (3%)

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
             + +  + RN    K VH+ +T + +  + ++ N L+ + +K  DL  A+ +F  M  +
Sbjct: 5   FFISTLFKCRNIFQIKQVHAQVTTTGIIHDLIVANKLLYMCAKHKDLVTAHLLFNKM-EE 63

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD VSWS MI  +V  G        F E++  G  P+ +    VI+AC +T  + +G +I
Sbjct: 64  RDPVSWSVMIGGFVKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLI 123

Query: 203 YGFLLKCG-YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +  +LK G + D+ VC    L+DM+ K  + +++A ++FD+M +K+ V  T+MI    + 
Sbjct: 124 HSTVLKNGLHLDNFVC--STLVDMYAKCGM-IDNAKQLFDRMPKKDLVTRTVMIAGYAEC 180

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G P ++  LF  M   GF+PD+  +  +V+AC++L      + +H +      +LDV +G
Sbjct: 181 GKPNESWVLFDQMRRDGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRYSLDVELG 240

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +++DMYAKC   GS+D SR++FDRM   NV+SW+A+I  Y    G+ +EA++LF  M+ 
Sbjct: 241 TAMIDMYAKC---GSIDSSREIFDRMEQKNVISWSAMIGAY-GYHGQGREALELFHMMLN 296

Query: 382 GQVAPNHFTFASVLKAC--GNLLDSNVAEQVYT-HAVKRGRALDDCVGNSLISMYARSGR 438
             + PN  TF S+L AC    L+D  +  Q+++  +V  G   D      ++ +  R+GR
Sbjct: 297 SGIIPNRITFISLLYACSHAGLVDDGL--QLFSLMSVSYGVRPDVKHYTCMVDLLGRAGR 354

Query: 439 MEDARKAFESL 449
           ++ A +  E++
Sbjct: 355 LDQALRLIENM 365



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 102/338 (30%), Positives = 184/338 (54%), Gaps = 6/338 (1%)

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+ V   L+ M  K   DL +A+ +F+KM E++ V W++MI    + G      + F ++
Sbjct: 34  DLIVANKLLYMCAKHK-DLVTAHLLFNKMEERDPVSWSVMIGGFVKNGDYERCFQTFREL 92

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           I +G  PD F+L  V+ AC +      G+ +HS  ++ GL LD  V  +LVDMYAKC   
Sbjct: 93  IRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDNFVCSTLVDMYAKC--- 149

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G +D+++++FDRM   ++++ T +I GY +  G+  E+  LF  M +    P+     ++
Sbjct: 150 GMIDNAKQLFDRMPKKDLVTRTVMIAGYAEC-GKPNESWVLFDQMRRDGFVPDKVAMVTI 208

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           + AC  L   N A  V+ +   R  +LD  +G ++I MYA+ G ++ +R+ F+ + +KN+
Sbjct: 209 VNACAKLGAMNKARLVHDYVCARRYSLDVELGTAMIDMYAKCGSIDSSREIFDRMEQKNV 268

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           +S++ M+ AY  +    +A EL H + ++G+  +  TF SLL   S  G +  G Q+ + 
Sbjct: 269 ISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYACSHAGLVDDGLQLFSL 328

Query: 515 I-IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           + +  G   +   Y  ++ +  R   ++ A ++ + ME
Sbjct: 329 MSVSYGVRPDVKHYTCMVDLLGRAGRLDQALRLIENME 366



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 182/350 (52%), Gaps = 16/350 (4%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G  ++   T   + + G+ PD  +   ++K+C  +    +G+L+HS + ++ L  ++
Sbjct: 77  VKNGDYERCFQTFRELIRAGSKPDNFSLPFVIKACRDTMGLIMGRLIHSTVLKNGLHLDN 136

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++L+ +Y+KCG ++ A ++F  M  K+D+V+ + MI+ Y   GK  ++  +F +M  
Sbjct: 137 FVCSTLVDMYAKCGMIDNAKQLFDRM-PKKDLVTRTVMIAGYAECGKPNESWVLFDQMRR 195

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            GF P++     ++ AC+    +    +++ ++    Y   DV +G A+IDM+ K GS+D
Sbjct: 196 DGFVPDKVAMVTIVNACAKLGAMNKARLVHDYVCARRY-SLDVELGTAMIDMYAKCGSID 254

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
             S+ ++FD+M +KN + W+ MI      G  R+A+ LF  M+ SG +P+R T   ++ A
Sbjct: 255 --SSREIFDRMEQKNVISWSAMIGAYGYHGQGREALELFHMMLNSGIIPNRITFISLLYA 312

Query: 293 CSELELFTSGKQLHS-WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDH 350
           CS   L   G QL S  ++  G+  DV     +VD+  +    G +D + ++ + M ++ 
Sbjct: 313 CSHAGLVDDGLQLFSLMSVSYGVRPDVKHYTCMVDLLGRA---GRLDQALRLIENMEVEK 369

Query: 351 NVMSWTAIITG---YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +   W A +     + Q    +K A  L S   Q    P H+   S + A
Sbjct: 370 DEGIWCAFLGACRIHRQVDLAEKAAKLLLSLQTQN---PGHYILLSNIYA 416


>gi|242055643|ref|XP_002456967.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
 gi|241928942|gb|EES02087.1| hypothetical protein SORBIDRAFT_03g046490 [Sorghum bicolor]
          Length = 785

 Score =  449 bits (1155), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 259/791 (32%), Positives = 438/791 (55%), Gaps = 20/791 (2%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK--CGDLNEANKIFKS 138
           Y  LL+SC    +      VH+ + R+    +  + NSL++ Y +   G    A ++   
Sbjct: 5   YLDLLRSCTALPHV---AAVHAHIARAHPTASLFLRNSLLAAYCRLGVGAPLHAARLIDE 61

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVA 197
           M  +R+ VS++ +ISSY   G    A+  F       G   + + ++A + ACS   ++ 
Sbjct: 62  M-PRRNAVSYNLLISSYSRAGLPGRALETFARARAAAGLRVDRFTYAAALAACSRALDLR 120

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  ++   +  G   + V +  +L  M+     ++  A +VFD   E + V W  +++ 
Sbjct: 121 TGKAVHAMTVLDG-LGNGVFLSNSLASMYASCG-EMGEARRVFDAAEEHDDVSWNSLLSG 178

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS--GKQLHSWAIRTGLA 315
             + G   + +++F  M   G   + F L  ++  C+          + +H   ++ GL 
Sbjct: 179 YVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCASGSDVGRHIAEAVHGCVVKAGLD 238

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ---SGGRD--K 370
            D+ +  +++DMYAK    G++ ++  +F  + D NV+ + A+I G+ +   + G++  +
Sbjct: 239 ADLFLASAMIDMYAK---RGALTNAVALFKSVPDPNVIVFNAMIAGFCRDEAAVGKEVSR 295

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+ L+S+M    + P+ FTF+S+L+AC    +    +Q++   +K     DD +G++LI
Sbjct: 296 EALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALI 355

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            +Y+ SG MED  + F SL ++++V++ +M+    +N   EKA  L  E    G+    +
Sbjct: 356 DLYSDSGCMEDGYRCFRSLPKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLF 415

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           T +S+++  +S+     GEQI    IK GF     + N+ I M +R  +V+A  + F+EM
Sbjct: 416 TMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTAMGNSFIHMCARSGDVDAVTRRFQEM 475

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           E R+V+SW+++I+  A+HG A  AL IF +M+   + PN +T++ VL+ACSH GL+ +G 
Sbjct: 476 ESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDGL 535

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
           +++  M +E+G+   ++H  C+VDLLGR+G L +A  FIR      D +VWR+ L +CR+
Sbjct: 536 RYYEIMKNEYGLSPTIKHVTCVVDLLGRAGRLADAEAFIRDSAFHDDAVVWRSLLASCRI 595

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           HGD E G+  A+ I++ +P   A++++L N+Y  AG     +  R  MKER + KE G S
Sbjct: 596 HGDMERGQLVADQIMDLEPTSSASYVILYNMYLDAGELSLASKTRDLMKERGVKKEPGLS 655

Query: 731 WIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYL 790
           WIE  + VH F  G+ SHP++  IY +L ++  KI++     + +     +   ++   +
Sbjct: 656 WIELRSGVHSFVAGDKSHPESNAIYKKLAEMLSKIEKLANTDNASTGSDGISSSEQ-NLV 714

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
             HSEKIAVAFG+I   +S PIRV KNLRVC DCH+ +K IS    REI+LRD  RFHH 
Sbjct: 715 GCHSEKIAVAFGMIHLPQSAPIRVMKNLRVCRDCHSTMKLISGSENREIILRDGIRFHHF 774

Query: 851 KDGKCSCNDYW 861
           + G CSC DYW
Sbjct: 775 RGGSCSCGDYW 785



 Score =  206 bits (523), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 149/563 (26%), Positives = 284/563 (50%), Gaps = 25/563 (4%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G   D  TY+  L +C R+ +   GK VH++     L     + NSL S+Y+ CG++ EA
Sbjct: 98  GLRVDRFTYAAALAACSRALDLRTGKAVHAMTVLDGLGNGVFLSNSLASMYASCGEMGEA 157

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F +   + D VSW+S++S YV  G + + + +F  M   G   N +   ++I+ C++
Sbjct: 158 RRVFDA-AEEHDDVSWNSLLSGYVRAGAREETLKVFSLMCHHGLGWNSFALGSIIKCCAS 216

Query: 193 TENVA--IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
             +V   I   ++G ++K G  D+D+ +  A+IDM+ K    L +A  +F  + + N + 
Sbjct: 217 GSDVGRHIAEAVHGCVVKAG-LDADLFLASAMIDMYAKRGA-LTNAVALFKSVPDPNVIV 274

Query: 251 WTLMITR-CTQLGC-----PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +  MI   C           R+A+ L+ +M   G  P  FT S ++ AC+    F  GKQ
Sbjct: 275 FNAMIAGFCRDEAAVGKEVSREALSLYSEMQSRGMQPSEFTFSSILRACNLAGEFGFGKQ 334

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   ++     D  +G +L+D+Y+     G ++D  + F  +   ++++WT++I+G VQ
Sbjct: 335 IHGQVLKHSFHDDDYIGSALIDLYSD---SGCMEDGYRCFRSLPKQDIVTWTSMISGCVQ 391

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +   +K A++LF + I   + P+ FT +SV+ AC +L  +   EQ+   A+K G      
Sbjct: 392 NELFEK-ALRLFQESICYGLKPDLFTMSSVMNACASLAVARTGEQIQCLAIKYGFNRFTA 450

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +GNS I M ARSG ++   + F+ +  +++VS++ ++ ++A++  +  A  + +E+ +  
Sbjct: 451 MGNSFIHMCARSGDVDAVTRRFQEMESRDVVSWSAVISSHAQHGCARDALRIFNEMMNAK 510

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA-----LISMYSRCAN 539
           V  +  TF ++L+  S  G +  G + +  I+K+ +  +  I +      L+    R A+
Sbjct: 511 VAPNEVTFLNVLTACSHGGLVDDGLRYY-EIMKNEYGLSPTIKHVTCVVDLLGRAGRLAD 569

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
            EA  +     +D   + W S++     HG   R  ++    + D    +  +Y+ + + 
Sbjct: 570 AEAFIRDSAFHDD--AVVWRSLLASCRIHGDMERG-QLVADQIMDLEPTSSASYVILYNM 626

Query: 600 CSHAGLISEGWKHFRSMYDEHGI 622
              AG +S   K  R +  E G+
Sbjct: 627 YLDAGELSLASKT-RDLMKERGV 648



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 71/234 (30%), Positives = 123/234 (52%), Gaps = 3/234 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  P   T+S +L++C  +  F  GK +H  + +     +  I ++LI LYS  G 
Sbjct: 304 MQSRGMQPSEFTFSSILRACNLAGEFGFGKQIHGQVLKHSFHDDDYIGSALIDLYSDSGC 363

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +  + F+S+  K+DIV+W+SMIS  V       A+ +F E +  G  P+ +  S+V+ 
Sbjct: 364 MEDGYRCFRSL-PKQDIVTWTSMISGCVQNELFEKALRLFQESICYGLKPDLFTMSSVMN 422

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC++      G  I    +K G F+    +G + I M  + S D+++  + F +M  ++ 
Sbjct: 423 ACASLAVARTGEQIQCLAIKYG-FNRFTAMGNSFIHMCAR-SGDVDAVTRRFQEMESRDV 480

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           V W+ +I+   Q GC RDA+R+F +M+ +   P+  T   V++ACS   L   G
Sbjct: 481 VSWSAVISSHAQHGCARDALRIFNEMMNAKVAPNEVTFLNVLTACSHGGLVDDG 534


>gi|147771387|emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 216/504 (42%), Positives = 328/504 (65%), Gaps = 1/504 (0%)

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           ++ GY+  G   K+A++LFS + +     +  T A+  KACG L+  +  +Q++ HA+K 
Sbjct: 1   MMFGYI-IGNDGKKALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKA 59

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G   D  V + ++ MY + G M +A   F  +   + V++ +M+     N N ++A  + 
Sbjct: 60  GFDSDLHVNSGILDMYIKCGDMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQALRIY 119

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
           H +  + V    YTFA+L+  +S + A+ +G Q+HA +IK    S+  +  +L+ MY++C
Sbjct: 120 HRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMYAKC 179

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
            N+E A+++FK+M  RN+  W +M+ G A+HG A  A+ +F  M + GI+P+ +++I +L
Sbjct: 180 GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGIL 239

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           SACSHAGL SE +++  SM +++GI   +EHY+C+VD LGR+G + EA + I +MP  A 
Sbjct: 240 SACSHAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKVIETMPFKAS 299

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
             + R  LGACR+ GD E GK  A  +   +P D AA++LLSN+YA+A  W+ V + RK 
Sbjct: 300 ASINRALLGACRIQGDVEXGKRVAARLFALEPFDSAAYVLLSNIYAAANRWDDVTDARKM 359

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
           MK +N+ K+ G SWI+  N +H F V + SHP+   IY +++++   I+E GY+PDT FV
Sbjct: 360 MKRKNVKKDPGFSWIDVKNMLHLFVVDDRSHPQADIIYDKVEEMMKTIREDGYVPDTEFV 419

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
           L ++E+E+K + L+ HSEK+A+A+GLIST  S  IRV KNLRVCGDCH AIKYIS V  R
Sbjct: 420 LLDVEDEEKERSLYYHSEKLAIAYGLISTPASTTIRVIKNLRVCGDCHNAIKYISKVFER 479

Query: 838 EIVLRDSNRFHHIKDGKCSCNDYW 861
           EIVLRD+NRFHH +DG CSC DYW
Sbjct: 480 EIVLRDANRFHHFRDGVCSCGDYW 503



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 94/313 (30%), Positives = 161/313 (51%), Gaps = 15/313 (4%)

Query: 151 MISSYV--NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           M+  Y+  N GK+  A+ +F  + + G   ++   +   +AC     +  G  I+   +K
Sbjct: 1   MMFGYIIGNDGKK--ALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIK 58

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
            G FDSD+ V   ++DM++K   D+ +A  VF+ ++  + V WT MI+ C   G    A+
Sbjct: 59  AG-FDSDLHVNSGILDMYIKCG-DMVNAGIVFNYISAPDDVAWTSMISGCVDNGNEDQAL 116

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
           R++  M  S  +PD +T + ++ A S +     G+QLH+  I+     D  VG SLVDMY
Sbjct: 117 RIYHRMRQSRVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCVSDPFVGTSLVDMY 176

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           AKC   G+++D+ ++F +M   N+  W A++ G  Q G  + EAV LF  M    + P+ 
Sbjct: 177 AKC---GNIEDAYRLFKKMNVRNIALWNAMLVGLAQHGNAE-EAVNLFKSMKSHGIEPDR 232

Query: 389 FTFASVLKACGNL-LDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKA 445
            +F  +L AC +  L S   E  Y H++     ++  + +   L+    R+G +++A K 
Sbjct: 233 VSFIGILSACSHAGLTSEAYE--YLHSMPNDYGIEPEIEHYSCLVDALGRAGLVQEADKV 290

Query: 446 FESLFEKNLVSYN 458
            E++  K   S N
Sbjct: 291 IETMPFKASASIN 303



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/294 (29%), Positives = 146/294 (49%), Gaps = 9/294 (3%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           NDG+  KA+    L+ + G   D  T +   K+C        GK +H+   ++  + +  
Sbjct: 9   NDGK--KALELFSLIHKSGEKSDQITLATAAKACGCLVLLDQGKQIHAHAIKAGFDSDLH 66

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + + ++ +Y KCGD+  A  +F  +    D V+W+SMIS  V+ G +  A+ ++  M + 
Sbjct: 67  VNSGILDMYIKCGDMVNAGIVFNYISAPDD-VAWTSMISGCVDNGNEDQALRIYHRMRQS 125

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+EY F+ +I+A S    +  G  ++  ++K     SD  VG +L+DM+ K   ++E
Sbjct: 126 RVMPDEYTFATLIKASSCVTALEQGRQLHANVIKLDCV-SDPFVGTSLVDMYAKCG-NIE 183

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            AY++F KM  +N   W  M+    Q G   +A+ LF  M   G  PDR +  G++SACS
Sbjct: 184 DAYRLFKKMNVRNIALWNAMLVGLAQHGNAEEAVNLFKSMKSHGIEPDRVSFIGILSACS 243

Query: 295 ELELFTSGKQ-LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
              L +   + LHS     G+  ++     LVD   +    G V ++ KV + M
Sbjct: 244 HAGLTSEAYEYLHSMPNDYGIEPEIEHYSCLVDALGRA---GLVQEADKVIETM 294



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 38/142 (26%), Positives = 75/142 (52%), Gaps = 5/142 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK--SCIRSRNFHLGKLVHSLLTRSKLEP 111
           +++G   +A+     M Q    PD  T++ L+K  SC+ +     G+ +H+ + +     
Sbjct: 107 VDNGNEDQALRIYHRMRQSRVMPDEYTFATLIKASSCVTA--LEQGRQLHANVIKLDCVS 164

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  +  SL+ +Y+KCG++ +A ++FK M N R+I  W++M+      G   +A+++F  M
Sbjct: 165 DPFVGTSLVDMYAKCGNIEDAYRLFKKM-NVRNIALWNAMLVGLAQHGNAEEAVNLFKSM 223

Query: 172 LELGFCPNEYCFSAVIRACSNT 193
              G  P+   F  ++ ACS+ 
Sbjct: 224 KSHGIEPDRVSFIGILSACSHA 245


>gi|224091973|ref|XP_002309422.1| predicted protein [Populus trichocarpa]
 gi|222855398|gb|EEE92945.1| predicted protein [Populus trichocarpa]
          Length = 582

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 227/590 (38%), Positives = 358/590 (60%), Gaps = 10/590 (1%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M+ SG  P+ FT    + +C+ L L  +GKQLH    +TG  L+  V  SL+ MY KC++
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLHCHVFKTGCLLEPFVQTSLISMYGKCSL 60

Query: 334 DGSVDDSRKVFDRMLDHNVMS--WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              +D++RK+FD       ++  + ++++GY  +  R K+ V LF +M +  V  N  T 
Sbjct: 61  ---IDNARKLFDENPQSRKLTVCYNSLLSGYALNS-RVKDVVVLFCEMRELGVEINGVTM 116

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
             +++ CG   +  +   V+   VK G  +D  VGN L++MY +SG ++  RK F+ +  
Sbjct: 117 LGLVQPCGIPGNLGLGMCVHGFCVKFGLDMDSSVGNCLLTMYVKSGEIDCGRKLFDEMPR 176

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           K L+++N M++ YA+N  +    EL  E+E  G      T   +LS  + +GA+  G+++
Sbjct: 177 KGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSVGKEV 236

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
             ++   GF SN  + NAL++MY+RC N++ A  +F  M  ++V+SWT++I G+  HG  
Sbjct: 237 ERKMEGFGFSSNPFLNNALVNMYARCGNLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQG 296

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A+ +F +M+  GIKP+G  +++VLSACSHAGL ++G  +F  M  ++G+    EHY+C
Sbjct: 297 EVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSC 356

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           MVDLLGR+G L EA E I SM + AD  +W   LGAC++H + EL + A E ++E +P +
Sbjct: 357 MVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELAELAFEQVIELEPTN 416

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              ++LLSN+Y  AG+ E +  +R  M++R L K+ GCS++E   +VH F  G+ +HP+T
Sbjct: 417 TGYYVLLSNVYTEAGNLEGILRVRMLMRKRKLKKDPGCSYVEFKGRVHLFFAGDRNHPQT 476

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
            EIY +L++L   +K+       +   HE  EE  +  +  HSEK+AVAF L++T K   
Sbjct: 477 NEIYKKLNELENLVKDLDGCKKND---HERREEY-LNSMGVHSEKLAVAFALLNTRKETE 532

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           I + KNLR+CGDCH  IK +S +  R+ V+RD+ RFHH K+G CSC +YW
Sbjct: 533 IIIIKNLRICGDCHLFIKLVSKIVDRQFVVRDATRFHHFKNGFCSCKEYW 582



 Score =  192 bits (488), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 142/453 (31%), Positives = 227/453 (50%), Gaps = 41/453 (9%)

Query: 69  MTQKGNHPDLDTYSLLLKSC------IRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           M + G  P+  T+   +KSC      I  +  H     H   T   LEP   +  SLIS+
Sbjct: 1   MLRSGASPNAFTFPFAIKSCAALSLPITGKQLH----CHVFKTGCLLEP--FVQTSLISM 54

Query: 123 YSKCGDLNEANKIFKSMGNKRDI-VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           Y KC  ++ A K+F      R + V ++S++S Y    +  D + +F EM ELG   N  
Sbjct: 55  YGKCSLIDNARKLFDENPQSRKLTVCYNSLLSGYALNSRVKDVVVLFCEMRELGVEINGV 114

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
               +++ C    N+ +G  ++GF +K G  D D  VG  L+ M+VK S +++   K+FD
Sbjct: 115 TMLGLVQPCGIPGNLGLGMCVHGFCVKFG-LDMDSSVGNCLLTMYVK-SGEIDCGRKLFD 172

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
           +M  K  + W  MI    Q G   + + L+ +M   GF PD  TL GV+S+C+ L   + 
Sbjct: 173 EMPRKGLITWNAMINGYAQNGLANNVLELYKEMESKGFCPDPLTLVGVLSSCAHLGALSV 232

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           GK++       G + +  +  +LV+MYA+C   G++  +R +FD M   +V+SWTAII G
Sbjct: 233 GKEVERKMEGFGFSSNPFLNNALVNMYARC---GNLKKARDIFDGMPVKSVVSWTAIIGG 289

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN-------VAEQVYTHA 414
           Y    G+ + AV LF +MI+G + P+   F SVL AC +   +N       V E+ Y   
Sbjct: 290 YGMH-GQGEVAVGLFDEMIRGGIKPDGTAFVSVLSACSHAGLTNKGLDYFGVMERKY--G 346

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---S 470
           ++ G     C    ++ +  R+GR+ +AR+  ES+    +   +  ++ A   + N   +
Sbjct: 347 LRPGAEHYSC----MVDLLGRAGRLNEARELIESMQVRADGALWGALLGACKIHRNVELA 402

Query: 471 EKAFELLHEIEDTGVG-----TSAYTFASLLSG 498
           E AFE + E+E T  G     ++ YT A  L G
Sbjct: 403 ELAFEQVIELEPTNTGYYVLLSNVYTEAGNLEG 435



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 144/301 (47%), Gaps = 16/301 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN  RV+  +     M + G   +  T   L++ C    N  LG  VH    +  L+ 
Sbjct: 88  YALNS-RVKDVVVLFCEMRELGVEINGVTMLGLVQPCGIPGNLGLGMCVHGFCVKFGLDM 146

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +S + N L+++Y K G+++   K+F  M  ++ +++W++MI+ Y   G   + + ++ EM
Sbjct: 147 DSSVGNCLLTMYVKSGEIDCGRKLFDEM-PRKGLITWNAMINGYAQNGLANNVLELYKEM 205

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              GFCP+      V+ +C++   +++G  +   +   G F S+  +  AL++M+ +   
Sbjct: 206 ESKGFCPDPLTLVGVLSSCAHLGALSVGKEVERKMEGFG-FSSNPFLNNALVNMYARCG- 263

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L+ A  +FD M  K+ V WT +I      G    A+ LF +MI  G  PD      V+S
Sbjct: 264 NLKKARDIFDGMPVKSVVSWTAIIGGYGMHGQGEVAVGLFDEMIRGGIKPDGTAFVSVLS 323

Query: 292 ACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ACS   L   G          + +R G     C    +VD+  +    G ++++R++ + 
Sbjct: 324 ACSHAGLTNKGLDYFGVMERKYGLRPGAEHYSC----MVDLLGRA---GRLNEARELIES 376

Query: 347 M 347
           M
Sbjct: 377 M 377


>gi|357129947|ref|XP_003566620.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Brachypodium distachyon]
          Length = 902

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 256/700 (36%), Positives = 404/700 (57%), Gaps = 12/700 (1%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  P   T++ +L +   +  F  G+ VH+   R  L+ N  + +SLI+LY+KCG + +A
Sbjct: 195 GLWPTRSTFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDA 254

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
             +F   G K ++V W++M++  V    QV+AI MF+ M  LG   +E+ + +V+ AC++
Sbjct: 255 ILVFDCSGEK-NVVMWNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAH 313

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGW 251
            ++  +G  +    +K    D+ + V  A +DM  K G++D   A  +F+ +T K+TV W
Sbjct: 314 LDSHCLGRQVQCVTIK-NCMDASLFVANATLDMHSKFGAID--DAKTLFNLITYKDTVSW 370

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
             ++   T      +AI +   M L G  PD  + + V++ACS +    +GKQ+H  A++
Sbjct: 371 NALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMK 430

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
             +  +  VG SL+D Y+K    G V+  RKV  ++   +++    +I G VQ+  R+ E
Sbjct: 431 HSICSNHAVGSSLIDFYSK---HGDVESCRKVLAQVDASSIVPRNVLIAGLVQNN-REDE 486

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLI 430
           A+ LF  +++  + P+ FTF+S+L  C  LL S + +QV+ + +K G   DD  VG SL+
Sbjct: 487 AIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLV 546

Query: 431 SMYARSGRMEDARKAF-ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
             Y ++   EDA K   E    KNLV +  +V  YA+N  S ++      +    V    
Sbjct: 547 GTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDE 606

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            TFAS+L   S + A+  G++IH  IIKSGF S     +A+I MYS+C ++ ++F+ FKE
Sbjct: 607 VTFASILKACSEMTALSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKE 666

Query: 550 MEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           ++ +  I+ W SMI GFAK+G+A  AL +F KM    IK + +T++ VL AC+HAGLISE
Sbjct: 667 LKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLIACAHAGLISE 726

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           G  +F SM   +GI+ R++HYAC +DLLGR G L EA E I  +P   D ++W T+L AC
Sbjct: 727 GRHYFDSMSKVYGIMPRVDHYACFIDLLGRGGHLQEAQEVINELPFRPDGVIWATYLAAC 786

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           R+H D E G+ AA+ ++E +PQ+ + ++LLSN+YA+AG+W      R+ M+E+   K  G
Sbjct: 787 RMHKDEERGEIAAKELVELEPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKFPG 846

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           CSWI   NK   F V + +H   L IY  LD L   + ++
Sbjct: 847 CSWITVGNKTSLFLVQDKNHLGALRIYEMLDNLTRMMHKY 886



 Score =  239 bits (610), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 145/593 (24%), Positives = 303/593 (51%), Gaps = 10/593 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD   ++ ++    R+  F     + + + +    P+ V   +++   +  G L +A  +
Sbjct: 95  PDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCALTALGRLEDARTL 154

Query: 136 FKSMGNKRDIVSWSSMISSYVNR-GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
              M      V+W+++IS Y  + G + +   ++ +M   G  P    F++++ A +N  
Sbjct: 155 LHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANAT 214

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
               G  ++   ++ G  D++V VG +LI+++ K    +  A  VFD   EKN V W  M
Sbjct: 215 AFIEGRQVHAAAVRHG-LDANVFVGSSLINLYAKCGC-IGDAILVFDCSGEKNVVMWNAM 272

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +    +     +AI++FL M   G   D FT   V+ AC+ L+    G+Q+    I+  +
Sbjct: 273 LNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCM 332

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
              + V  + +DM++K    G++DD++ +F+ +   + +SW A++ G   +   D+EA+ 
Sbjct: 333 DASLFVANATLDMHSKF---GAIDDAKTLFNLITYKDTVSWNALLVGLTHN-EEDEEAIH 388

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           +   M    V P+  +FA+V+ AC N+  +   +Q++  A+K     +  VG+SLI  Y+
Sbjct: 389 MLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYS 448

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +E  RK    +   ++V  N ++    +N   ++A +L  ++   G+  S++TF+S
Sbjct: 449 KHGDVESCRKVLAQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSS 508

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGF-ESNHCIYNALISMYSRCANVEAAFQVFKEMED- 552
           +LSG + + +   G+Q+H   +KSGF   +  +  +L+  Y +    E A ++  EM D 
Sbjct: 509 ILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMPEDANKLLIEMPDH 568

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           +N++ WT++++G+A++G++ ++L  F++M +  + P+ +T+ ++L ACS    +S+G K 
Sbjct: 569 KNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDG-KE 627

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
              +  + G        + ++D+  + G +  + E  + +    D+ +W + +
Sbjct: 628 IHGLIIKSGFGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMI 680



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 150/537 (27%), Positives = 265/537 (49%), Gaps = 46/537 (8%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD    +  L +C R      GK  H    +  L   +    +L+++Y++CG + +A
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGDA 85

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F  + +  D V W+SMIS Y   G+  +A+ +F  M ++G  P+     AV+     
Sbjct: 86  RRVFGGI-SLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV----- 139

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGW 251
                                      CAL  +       LE A  +  +M    +TV W
Sbjct: 140 ---------------------------CALTALG-----RLEDARTLLHRMPAPSSTVAW 167

Query: 252 TLMIT-RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
             +I+    Q G   +   L+ DM   G  P R T + ++SA +    F  G+Q+H+ A+
Sbjct: 168 NAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHAAAV 227

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           R GL  +V VG SL+++YAKC   G + D+  VFD   + NV+ W A++ G V++     
Sbjct: 228 RHGLDANVFVGSSLINLYAKC---GCIGDAILVFDCSGEKNVVMWNAMLNGLVRN-EYQV 283

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           EA+++F  M +  +  + FT+ SVL AC +L    +  QV    +K        V N+ +
Sbjct: 284 EAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATL 343

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            M+++ G ++DA+  F  +  K+ VS+N ++     N   E+A  +L  +   GV     
Sbjct: 344 DMHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEV 403

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           +FA++++  S+I A   G+QIH   +K    SNH + ++LI  YS+  +VE+  +V  ++
Sbjct: 404 SFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQV 463

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           +  +++    +I G  ++     A+++F ++L DG+KP+  T+ ++LS C+  GL+S
Sbjct: 464 DASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCT--GLLS 518



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 153/549 (27%), Positives = 270/549 (49%), Gaps = 13/549 (2%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +AI     M + G   D  TY  +L +C    +  LG+ V  +  ++ ++ +  + N+ +
Sbjct: 284 EAIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATL 343

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            ++SK G +++A  +F  +  K D VSW++++    +  +  +AIHM   M   G  P+E
Sbjct: 344 DMHSKFGAIDDAKTLFNLITYK-DTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDE 402

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             F+ VI ACSN      G  I+   +K     S+  VG +LID + K   D+ES  KV 
Sbjct: 403 VSFATVINACSNIRATETGKQIHCLAMKHSIC-SNHAVGSSLIDFYSKHG-DVESCRKVL 460

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
            ++   + V   ++I    Q     +AI LF  ++  G  P  FT S ++S C+ L    
Sbjct: 461 AQVDASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSI 520

Query: 301 SGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAI 358
            GKQ+H + +++G L  D  VG SLV  Y K  +    +D+ K+   M DH N++ WTAI
Sbjct: 521 IGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMP---EDANKLLIEMPDHKNLVEWTAI 577

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           ++GY Q+ G   +++  F  M    V P+  TFAS+LKAC  +   +  ++++   +K G
Sbjct: 578 VSGYAQN-GYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSG 636

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-YNTMVDAYAKNLNSEKAFELL 477
                   +++I MY++ G +  + +AF+ L  K  ++ +N+M+  +AKN  +++A  L 
Sbjct: 637 FGSYKTATSAIIDMYSKCGDIISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLF 696

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSR 536
            +++D+ + +   TF  +L   +  G I +G      + K  G       Y   I +  R
Sbjct: 697 QKMQDSQIKSDEVTFLGVLIACAHAGLISEGRHYFDSMSKVYGIMPRVDHYACFIDLLGR 756

Query: 537 CANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
             +++ A +V  E+  R + + W + +     H    R  EI  K L +    N  TY+ 
Sbjct: 757 GGHLQEAQEVINELPFRPDGVIWATYLAACRMHKDEERG-EIAAKELVELEPQNSSTYVL 815

Query: 596 VLSACSHAG 604
           + +  + AG
Sbjct: 816 LSNMYAAAG 824



 Score =  156 bits (394), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 174/343 (50%), Gaps = 8/343 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           ++AI  L  M   G  PD  +++ ++ +C   R    GK +H L  +  +  N  + +SL
Sbjct: 384 EEAIHMLKGMNLDGVTPDEVSFATVINACSNIRATETGKQIHCLAMKHSICSNHAVGSSL 443

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I  YSK GD+    K+   + +   IV  + +I+  V   ++ +AI +F ++L  G  P+
Sbjct: 444 IDFYSKHGDVESCRKVLAQV-DASSIVPRNVLIAGLVQNNREDEAIDLFQQVLRDGLKPS 502

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
            + FS+++  C+   +  IG  ++ + LK G+ + D  VG +L+  ++K  +  E A K+
Sbjct: 503 SFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDDTSVGVSLVGTYLKARMP-EDANKL 561

Query: 240 FDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
             +M + KN V WT +++   Q G    ++  F  M      PD  T + ++ ACSE+  
Sbjct: 562 LIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMRSYDVHPDEVTFASILKACSEMTA 621

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTA 357
            + GK++H   I++G         +++DMY+KC   G +  S + F  +    ++  W +
Sbjct: 622 LSDGKEIHGLIIKSGFGSYKTATSAIIDMYSKC---GDIISSFEAFKELKSKQDITLWNS 678

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           +I G+ ++G  D EA+ LF  M   Q+  +  TF  VL AC +
Sbjct: 679 MILGFAKNGYAD-EALLLFQKMQDSQIKSDEVTFLGVLIACAH 720



 Score =  155 bits (392), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 227/503 (45%), Gaps = 46/503 (9%)

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P+++  +A + ACS    +  G   +    K G      C   AL++M+ + G V  
Sbjct: 26  GVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAA-ALVNMYARCGRVG- 83

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A +VF  ++  +TV W  MI+   + G  ++A+ LF  M   G  PDR T   VV A 
Sbjct: 84  -DARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVVCAL 142

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
           + L                                      G ++D+R +  RM    + 
Sbjct: 143 TAL--------------------------------------GRLEDARTLLHRMPAPSST 164

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W A+I+GY Q  G + E   L+ DM    + P   TFAS+L A  N        QV+ 
Sbjct: 165 VAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRSTFASMLSAAANATAFIEGRQVHA 224

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
            AV+ G   +  VG+SLI++YA+ G + DA   F+   EKN+V +N M++   +N    +
Sbjct: 225 AAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCSGEKNVVMWNAMLNGLVRNEYQVE 284

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A ++   ++  G+    +T+ S+L   + + +   G Q+    IK+  +++  + NA + 
Sbjct: 285 AIQMFLYMKRLGLEADEFTYVSVLGACAHLDSHCLGRQVQCVTIKNCMDASLFVANATLD 344

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           M+S+   ++ A  +F  +  ++ +SW +++ G   +     A+ +   M  DG+ P+ ++
Sbjct: 345 MHSKFGAIDDAKTLFNLITYKDTVSWNALLVGLTHNEEDEEAIHMLKGMNLDGVTPDEVS 404

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +  V++ACS+      G K    +  +H I       + ++D   + G +    + +  +
Sbjct: 405 FATVINACSNIRATETG-KQIHCLAMKHSICSNHAVGSSLIDFYSKHGDVESCRKVLAQV 463

Query: 653 PLSADVLVWRTFLGACRVHGDTE 675
             S+  +V R  L A  V  + E
Sbjct: 464 DASS--IVPRNVLIAGLVQNNRE 484



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 172/408 (42%), Gaps = 46/408 (11%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK-LEPN 112
           + + R  +AI     + + G  P   T+S +L  C    +  +GK VH    +S  L  +
Sbjct: 479 VQNNREDEAIDLFQQVLRDGLKPSSFTFSSILSGCTGLLSSIIGKQVHCYTLKSGFLNDD 538

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + +  SL+  Y K     +ANK+   M + +++V W++++S Y   G    ++  F  M 
Sbjct: 539 TSVGVSLVGTYLKARMPEDANKLLIEMPDHKNLVEWTAIVSGYAQNGYSYQSLLSFWRMR 598

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
                P+E  F+++++ACS    ++ G  I+G ++K G F S      A+IDM+ K   D
Sbjct: 599 SYDVHPDEVTFASILKACSEMTALSDGKEIHGLIIKSG-FGSYKTATSAIIDMYSKCG-D 656

Query: 233 LESAYKVFDKMTEKNTVG-WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           + S+++ F ++  K  +  W  MI    + G   +A+ LF  M  S    D  T  GV+ 
Sbjct: 657 IISSFEAFKELKSKQDITLWNSMILGFAKNGYADEALLLFQKMQDSQIKSDEVTFLGVLI 716

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LD 349
           AC+   L + G+                                  D   KV+  M  +D
Sbjct: 717 ACAHAGLISEGRHY-------------------------------FDSMSKVYGIMPRVD 745

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           H      A     +  GG  +EA ++ +++      P+   +A+ L AC    D    E 
Sbjct: 746 H-----YACFIDLLGRGGHLQEAQEVINEL---PFRPDGVIWATYLAACRMHKDEERGEI 797

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
                V+     +      L +MYA +G   +A+ A E++ EK    +
Sbjct: 798 AAKELVEL-EPQNSSTYVLLSNMYAAAGNWVEAKMAREAMREKGATKF 844



 Score = 73.9 bits (180), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/295 (22%), Positives = 135/295 (45%), Gaps = 16/295 (5%)

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
           G V P+ F  A+ L AC  L      +Q +  A KRG         +L++MYAR GR+ D
Sbjct: 25  GGVRPDQFDLAATLSACSRLGALVSGKQAHCDAEKRGLGSGAFCAAALVNMYARCGRVGD 84

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           AR+ F  +   + V + +M+  Y +    ++A  L   +E  G      T  +++    +
Sbjct: 85  ARRVFGGISLPDTVCWASMISGYHRAGRFQEAVCLFTRMEKMGSSPDRVTCVAVV---CA 141

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE-AAFQVFKEMEDRNVI---- 556
           + A+G+ E     + +    S+   +NA+IS Y++ + +E   F ++K+M    +     
Sbjct: 142 LTALGRLEDARTLLHRMPAPSSTVAWNAVISGYAQQSGIEHEVFGLYKDMRCWGLWPTRS 201

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           ++ SM++  A         ++    +  G+  N     ++++  +  G I +    F   
Sbjct: 202 TFASMLSAAANATAFIEGRQVHAAAVRHGLDANVFVGSSLINLYAKCGCIGDAILVFDCS 261

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALE---FIRSMPLSADVLVWRTFLGAC 668
            +++ ++     +  M++ L R+    EA++   +++ + L AD   + + LGAC
Sbjct: 262 GEKNVVM-----WNAMLNGLVRNEYQVEAIQMFLYMKRLGLEADEFTYVSVLGAC 311


>gi|15242443|ref|NP_198784.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171206|sp|Q9FK93.1|PP406_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39680; AltName: Full=Protein EMBRYO DEFECTIVE 2744
 gi|9758344|dbj|BAB08900.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332007080|gb|AED94463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 238/682 (34%), Positives = 389/682 (57%), Gaps = 8/682 (1%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFD--SDVCVGCALIDMFVKGSVDLESAYKVF 240
            + +++ C+N+  + IG  I+  L+         D     +LI+++VK    +  A K+F
Sbjct: 34  LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR-ARKLF 92

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACSELELF 299
           D M E+N V W  M+      G   + ++LF  M  SG   P+ F  + V  +CS     
Sbjct: 93  DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GKQ H   ++ GL     V  +LV MY+ C+ +G   ++ +V D +   ++  +++ +
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG---EAIRVLDDLPYCDLSVFSSAL 209

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +GY++ G   KE + +           N+ T+ S L+   NL D N+A QV++  V+ G 
Sbjct: 210 SGYLECGAF-KEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
             +     +LI+MY + G++  A++ F+    +N+    T++DAY ++ + E+A  L  +
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           ++   V  + YTFA LL+  + +  + +G+ +H  ++KSG+ ++  + NAL++MY++  +
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +E A + F  M  R++++W +MI+G + HG    ALE F +M+  G  PN IT+I VL A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CSH G + +G  +F  +  +  +   ++HY C+V LL ++G   +A +F+R+ P+  DV+
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
            WRT L AC V  +  LGK  AE  +E+ P D   ++LLSN++A +  WE VA +R  M 
Sbjct: 509 AWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMN 568

Query: 720 ERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
            R + KE G SWI   N+ H F   +  HP+   IYA++ ++  KIK  GY PD     H
Sbjct: 569 NRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFH 628

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           +++EEQ+   L  HSEK+AVA+GLI T +  P+ V KN+R+C DCH+AIK IS ++ R I
Sbjct: 629 DVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYI 688

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           V+RDSNRFHH  DG+CSC DYW
Sbjct: 689 VIRDSNRFHHFLDGQCSCCDYW 710



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 149/561 (26%), Positives = 261/561 (46%), Gaps = 35/561 (6%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLL---TRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           +D  + LLK C  S    +G+ +H+ L    +S    ++  +NSLI+LY KC +   A K
Sbjct: 31  IDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARK 90

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNT 193
           +F  M  +R++VSW +M+  Y N G   + + +F  M   G   PNE+  + V ++CSN+
Sbjct: 91  LFDLMP-ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
             +  G   +G  LK G    +  V   L+ M+   S + E A +V D +   +   ++ 
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGE-AIRVLDDLPYCDLSVFSS 207

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
            ++   + G  ++ + +        F+ +  T    +   S L       Q+HS  +R G
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              +V    +L++MY KC   G V  +++VFD     N+   T I+  Y Q    + EA+
Sbjct: 268 FNAEVEACGALINMYGKC---GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE-EAL 323

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            LFS M   +V PN +TFA +L +   L      + ++   +K G      VGN+L++MY
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+SG +EDARKAF  +  +++V++NTM+   + +    +A E    +  TG   +  TF 
Sbjct: 384 AKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME 551
            +L   S IG + +G     +++K  F+    I  Y  ++ + S+         +FK+ E
Sbjct: 444 GVLQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAG-------MFKDAE 495

Query: 552 D--------RNVISWTSMITGFAKHGFAARALEIFYKMLADGIK--PNGITYIAVLSACS 601
           D         +V++W +++       +  R   +  K+    I+  PN      +LS   
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNA----CYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIH 551

Query: 602 HAGLISEGWKHFRSMYDEHGI 622
                 EG    RS+ +  G+
Sbjct: 552 AKSREWEGVAKVRSLMNNRGV 572



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 188/390 (48%), Gaps = 9/390 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+    +++ KSC  S     GK  H    +  L  +  + N+L+ +YS C    EA ++
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
              +    D+  +SS +S Y+  G   + + +  +     F  N   + + +R  SN  +
Sbjct: 194 LDDLP-YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +   ++  +++ G F+++V    ALI+M+ K    L  A +VFD    +N    T ++
Sbjct: 253 LNLALQVHSRMVRFG-FNAEVEACGALINMYGKCGKVL-YAQRVFDDTHAQNIFLNTTIM 310

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               Q     +A+ LF  M      P+ +T + ++++ +EL L   G  LH   +++G  
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
             V VG +LV+MYAK    GS++D+RK F  M   ++++W  +I+G     G  +EA++ 
Sbjct: 371 NHVMVGNALVNMYAK---SGSIEDARKAFSGMTFRDIVTWNTMISG-CSHHGLGREALEA 426

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMYA 434
           F  MI     PN  TF  VL+AC ++         +   +K+     D    + ++ + +
Sbjct: 427 FDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486

Query: 435 RSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           ++G  +DA     +   E ++V++ T+++A
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 1/206 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  D   ++A+     M  K   P+  T+++LL S         G L+H L+ +S    +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ N+L+++Y+K G + +A K F  M   RDIV+W++MIS   + G   +A+  F  M+
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGM-TFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN   F  V++ACS+   V  G   +  L+K      D+     ++ +  K  + 
Sbjct: 432 FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMF 491

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRC 258
            ++   +     E + V W  ++  C
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNAC 517


>gi|224080790|ref|XP_002306231.1| predicted protein [Populus trichocarpa]
 gi|222849195|gb|EEE86742.1| predicted protein [Populus trichocarpa]
          Length = 480

 Score =  449 bits (1154), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 204/479 (42%), Positives = 326/479 (68%), Gaps = 5/479 (1%)

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + PN FT++++L A   +       +++  A+KR       VG +L+  Y + G +++A 
Sbjct: 6   IKPNDFTYSTILTAQPGV----SPFEMHAQAIKRNYVKSPSVGTALLDAYVKRGNVDEAS 61

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG-ASSI 502
           K F+ + EK++V+++ M+  YA+  ++E A  +  ++    +  + YTF+ +++  A+  
Sbjct: 62  KVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPT 121

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
             + +G+Q+HA  IKS F +  C+ +AL++MYS+  ++E+AF+VFK   +R+++SW S+I
Sbjct: 122 AGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSKRGDIESAFEVFKRQRERDLVSWNSII 181

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           +G+A+HG+  +ALE+F +M    ++ +G+T+I V+SAC+H GL +EG ++F  M  +H I
Sbjct: 182 SGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHI 241

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
             RMEHY+CMVDL GR+G L +A+E I  MP  A   VWRT L A  +H + E+GK AA+
Sbjct: 242 EPRMEHYSCMVDLYGRAGMLVKAMEIINEMPFPASANVWRTLLAASCIHRNLEVGKLAAD 301

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            ++   PQ+PA+++LL+N+YAS G+W+  A +RK M+E+ + K AG SWIE  NK + F 
Sbjct: 302 KLISLQPQNPASYVLLTNMYASVGNWKERAKVRKLMEEKKVKKVAGYSWIEVKNKTYTFL 361

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
            G+ SHP + +IYA+L++L+ ++K  GY PDT++V  +++EE K   L QHSE++A+AFG
Sbjct: 362 AGDVSHPLSNQIYAKLEELSCQLKGAGYQPDTSYVFQDVDEEHKEAILSQHSERLAIAFG 421

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LI T    P+++ KNLRVCGDCH+ IK IS++ GR+IV+RDSNRFHH K G CSC DYW
Sbjct: 422 LIGTPPGTPLQIVKNLRVCGDCHSVIKLISILEGRDIVVRDSNRFHHFKGGLCSCGDYW 480



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 186/387 (48%), Gaps = 47/387 (12%)

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M   G  PN++ +S ++ A        +    +   +K  Y  S   VG AL+D +VK G
Sbjct: 1   MSREGIKPNDFTYSTILTAQPGVSPFEM----HAQAIKRNYVKSP-SVGTALLDAYVKRG 55

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +VD   A KVF ++ EK+ V W+ MI    Q+G    A+R+F+ M      P+ +T SG+
Sbjct: 56  NVD--EASKVFQRIEEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGI 113

Query: 290 VSACSELEL-FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++AC+        GKQLH+W+I++     +CV  +L+ MY+K    G ++ + +VF R  
Sbjct: 114 INACAAPTAGVEQGKQLHAWSIKSRFNNALCVSSALLTMYSK---RGDIESAFEVFKRQR 170

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + +++SW +II+GY Q  G  ++A+++F +M +  +  +  TF  V+ AC +   +N  +
Sbjct: 171 ERDLVSWNSIISGYAQH-GYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQ 229

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           + +   VK                              +   E  +  Y+ MVD Y +  
Sbjct: 230 RYFDIMVK------------------------------DHHIEPRMEHYSCMVDLYGRAG 259

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              KA E+++E+       SA  + +LL+ AS I    +  ++ A  + S    N   Y 
Sbjct: 260 MLVKAMEIINEMP---FPASANVWRTLLA-ASCIHRNLEVGKLAADKLISLQPQNPASYV 315

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNV 555
            L +MY+   N +   +V K ME++ V
Sbjct: 316 LLTNMYASVGNWKERAKVRKLMEEKKV 342



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 75/237 (31%), Positives = 129/237 (54%), Gaps = 8/237 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M+++G  P+  TYS +L +      F +    H+   +     +  +  +L+  Y K G+
Sbjct: 1   MSREGIKPNDFTYSTILTAQPGVSPFEM----HAQAIKRNYVKSPSVGTALLDAYVKRGN 56

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           ++EA+K+F+ +  ++DIV+WS+MI  Y   G    A+ +FV+M +    PNEY FS +I 
Sbjct: 57  VDEASKVFQRI-EEKDIVAWSAMICGYAQIGDTEGAVRIFVQMAKEKIKPNEYTFSGIIN 115

Query: 189 ACSN-TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           AC+  T  V  G  ++ + +K   F++ +CV  AL+ M+ K   D+ESA++VF +  E++
Sbjct: 116 ACAAPTAGVEQGKQLHAWSIK-SRFNNALCVSSALLTMYSKRG-DIESAFEVFKRQRERD 173

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            V W  +I+   Q G  R A+ +F +M       D  T  GV+SAC+   L   G++
Sbjct: 174 LVSWNSIISGYAQHGYGRKALEVFEEMQRQNLEMDGVTFIGVISACTHTGLANEGQR 230



 Score = 69.3 bits (168), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 94/188 (50%), Gaps = 3/188 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEPNSVI 115
           G  + A+     M ++   P+  T+S ++ +C   +     GK +H+   +S+      +
Sbjct: 86  GDTEGAVRIFVQMAKEKIKPNEYTFSGIINACAAPTAGVEQGKQLHAWSIKSRFNNALCV 145

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++L+++YSK GD+  A ++FK    +RD+VSW+S+IS Y   G    A+ +F EM    
Sbjct: 146 SSALLTMYSKRGDIESAFEVFKRQ-RERDLVSWNSIISGYAQHGYGRKALEVFEEMQRQN 204

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
              +   F  VI AC++T     G   +  ++K  + +  +     ++D++ +  + L  
Sbjct: 205 LEMDGVTFIGVISACTHTGLANEGQRYFDIMVKDHHIEPRMEHYSCMVDLYGRAGM-LVK 263

Query: 236 AYKVFDKM 243
           A ++ ++M
Sbjct: 264 AMEIINEM 271


>gi|125577145|gb|EAZ18367.1| hypothetical protein OsJ_33897 [Oryza sativa Japonica Group]
          Length = 730

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 232/642 (36%), Positives = 376/642 (58%), Gaps = 24/642 (3%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++FD M E+N V WT ++T  T    P   + +F++M+  G  P  +TL   ++AC  
Sbjct: 92  ARRLFDGMPERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNACLA 151

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 GKQ+H +AI+ G      +G SL  +YAK    GS+D + + F R+ + NV++W
Sbjct: 152 SCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKL---GSLDSALRAFWRIPEKNVITW 208

Query: 356 TAIITGYVQSGGRDKEAVKL----FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           T +I+   +    D+E V+L    F DM+   V PN FT  SV+  CG  LD N+ +QV 
Sbjct: 209 TTMISACAE----DEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQ 264

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             + K G   +  V NS + +Y R G  ++A + FE + + +++++N M+  YA+ ++S 
Sbjct: 265 AFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQMEDASIITWNAMISGYAQIMDSA 324

Query: 472 K-----------AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           K           A  +  +++ + +    +TF+S+LS  S++ A+ +GEQIHA+ IKSGF
Sbjct: 325 KDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSGF 384

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            S+  + +AL++MY++C  ++ A + F EM  R  ++WTSMI+G+++HG    A+++F +
Sbjct: 385 LSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFEE 444

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M   G++PN IT++++LSACS+AGL+ E   +F  M  E+ I   ++HY CM+D+  R G
Sbjct: 445 MRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKKEYCIEPVVDHYGCMIDMFVRLG 504

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            + +A  FI+      +  +W + +  CR HG+ EL  +AA+ +LE  P+    +ILL N
Sbjct: 505 RVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLELKPKGIETYILLLN 564

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +Y S   W+ VA +RK MK+ ++      SWI   +KV+ F   + +HP+  E+Y  L+ 
Sbjct: 565 MYISTERWQDVARVRKLMKQEDVGILRDRSWITIKDKVYFFRANDRTHPQATELYQLLEN 624

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQK--VQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
           L  K K  GY P  N  L + E+++K     L  HSE++AVA GL+ T     +RV KN+
Sbjct: 625 LLEKAKAIGYEPYQNAELSDSEDDEKPAAGSLKHHSERLAVALGLLQTPPGATVRVTKNI 684

Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
            +C DCH++IK  S++  REI++RDS R H  KDG+CSC D+
Sbjct: 685 TMCRDCHSSIKLFSLLENREIIVRDSKRLHKFKDGRCSCGDF 726



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 145/488 (29%), Positives = 263/488 (53%), Gaps = 34/488 (6%)

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
           +A ++F  M  +R++V+W+++++ Y    +    + +FVEMLE+G  P+ Y   A + AC
Sbjct: 91  DARRLFDGM-PERNVVTWTALVTGYTLNSQPALGLEVFVEMLEMGRYPSHYTLGATLNAC 149

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTV 249
             + +V +G  ++G+ +K G  +S   +G +L  ++ K GS+D  SA + F ++ EKN +
Sbjct: 150 LASCDVDLGKQVHGYAIKYGA-ESITSMGNSLCSLYAKLGSLD--SALRAFWRIPEKNVI 206

Query: 250 GWTLMITRCTQ-LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
            WT MI+ C +   C    + LF+DM++ G +P+ FTL+ V+S C        GKQ+ ++
Sbjct: 207 TWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVMSLCGTRLDLNLGKQVQAF 266

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY------ 362
           + + G   ++ V  S + +Y +    G  D++ ++F++M D ++++W A+I+GY      
Sbjct: 267 SFKIGCETNLPVKNSTMYLYLR---KGETDEAMRLFEQMEDASIITWNAMISGYAQIMDS 323

Query: 363 ----VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
               +Q+  R  +A+ +F D+ +  + P+ FTF+S+L  C  ++     EQ++   +K G
Sbjct: 324 AKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSAMMALEQGEQIHAQTIKSG 383

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  V ++L++MY + G ++DA KAF  +  +  V++ +M+  Y+++   ++A +L  
Sbjct: 384 FLSDVVVNSALVNMYNKCGCIQDANKAFLEMPTRTFVTWTSMISGYSQHGQPQEAIQLFE 443

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI------YNALIS 532
           E+   GV  +  TF SLLS  S  G + + E     + K      +CI      Y  +I 
Sbjct: 444 EMRLAGVRPNEITFVSLLSACSYAGLVEEAEHYFDMMKK-----EYCIEPVVDHYGCMID 498

Query: 533 MYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
           M+ R   VE AF   K    + N   W+S++ G   HG    A     K+L   +KP GI
Sbjct: 499 MFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMELAFYAADKLLE--LKPKGI 556

Query: 592 -TYIAVLS 598
            TYI +L+
Sbjct: 557 ETYILLLN 564



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 132/438 (30%), Positives = 228/438 (52%), Gaps = 28/438 (6%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G +P   T    L +C+ S +  LGK VH    +   E  + + NSL SLY+K G 
Sbjct: 130 MLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLYAKLGS 189

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD-AIHMFVEMLELGFCPNEYCFSAVI 187
           L+ A + F  +  K ++++W++MIS+     + V+  + +F++ML  G  PNE+  ++V+
Sbjct: 190 LDSALRAFWRIPEK-NVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTLTSVM 248

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV-KGSVDLESAYKVFDKMTEK 246
             C    ++ +G  +  F  K G  ++++ V  + + +++ KG  D   A ++F++M + 
Sbjct: 249 SLCGTRLDLNLGKQVQAFSFKIG-CETNLPVKNSTMYLYLRKGETD--EAMRLFEQMEDA 305

Query: 247 NTVGWTLMITRCTQ-LGCPRD----------AIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           + + W  MI+   Q +   +D          A+ +F D+  S   PD FT S ++S CS 
Sbjct: 306 SIITWNAMISGYAQIMDSAKDDLQARSRGFQALTIFRDLKRSVMKPDLFTFSSILSVCSA 365

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           +     G+Q+H+  I++G   DV V  +LV+MY KC   G + D+ K F  M     ++W
Sbjct: 366 MMALEQGEQIHAQTIKSGFLSDVVVNSALVNMYNKC---GCIQDANKAFLEMPTRTFVTW 422

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           T++I+GY Q  G+ +EA++LF +M    V PN  TF S+L AC        AE  Y   +
Sbjct: 423 TSMISGYSQH-GQPQEAIQLFEEMRLAGVRPNEITFVSLLSACSYAGLVEEAEH-YFDMM 480

Query: 416 KRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEK 472
           K+   ++  V +   +I M+ R GR+EDA    +   FE N   ++++V     + N E 
Sbjct: 481 KKEYCIEPVVDHYGCMIDMFVRLGRVEDAFSFIKRTGFEPNEAIWSSLVAGCRSHGNMEL 540

Query: 473 AF---ELLHEIEDTGVGT 487
           AF   + L E++  G+ T
Sbjct: 541 AFYAADKLLELKPKGIET 558



 Score = 98.6 bits (244), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 121/252 (48%), Gaps = 8/252 (3%)

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +  G+A+   +   L+   AR     DAR+ F+ + E+N+V++  +V  Y  N       
Sbjct: 70  LTEGKAVQSAMYVPLLHRAAR-----DARRLFDGMPERNVVTWTALVTGYTLNSQPALGL 124

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
           E+  E+ + G   S YT  + L+   +   +  G+Q+H   IK G ES   + N+L S+Y
Sbjct: 125 EVFVEMLEMGRYPSHYTLGATLNACLASCDVDLGKQVHGYAIKYGAESITSMGNSLCSLY 184

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR-ALEIFYKMLADGIKPNGITY 593
           ++  ++++A + F  + ++NVI+WT+MI+  A+        + +F  ML DG+ PN  T 
Sbjct: 185 AKLGSLDSALRAFWRIPEKNVITWTTMISACAEDEECVELGMSLFIDMLMDGVMPNEFTL 244

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            +V+S C     ++ G K  ++   + G    +      + L  R G   EA+     M 
Sbjct: 245 TSVMSLCGTRLDLNLG-KQVQAFSFKIGCETNLPVKNSTMYLYLRKGETDEAMRLFEQME 303

Query: 654 LSADVLVWRTFL 665
             A ++ W   +
Sbjct: 304 -DASIITWNAMI 314


>gi|225441775|ref|XP_002277828.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Vitis vinifera]
          Length = 773

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 257/764 (33%), Positives = 431/764 (56%), Gaps = 29/764 (3%)

Query: 7   PAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTL 66
           P   +I    +F P      N   +S P   AQ   S+   + ++Y  +D          
Sbjct: 22  PHSTEILNSPAFSPLKARPANTGFNSYPGHNAQDPNSKTTHSSMVYCNSD---------- 71

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
                   +P  + +  LL+  I S +  LG+ +H+ L +   + ++   N+L++LY K 
Sbjct: 72  -----SDQNPLFNDWPQLLQISIGSGDLMLGQAIHAFLAKLGYQNDAFRGNNLVNLYGKF 126

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
             L +A  +F  M   R+ ++W+++I  ++          +  EM  +G   NE+  S +
Sbjct: 127 NKLGDAQSVFDEM-LVRNTITWTTLIKGHLQVNDVESVFRIAREMYWVGEEFNEHTCSVI 185

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++AC + EN+  G  I+GF++K G FD DV VG +LI M+ +   DL +A KV+  +  K
Sbjct: 186 LQACDSLENLVRGEQIHGFVIKRG-FDEDVFVGTSLISMYSRCG-DLGAAEKVYSNLAYK 243

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS---ELELFTSGK 303
           +      MI+   + GC   AI +FL ++ SG  P+ +T + V+SAC+   ++E+    +
Sbjct: 244 DVRCLNFMISEYGKAGCGEKAIGVFLHLLGSGLEPNDYTFTNVISACNGDIDVEVL---R 300

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
            LH   I+ G   ++ VG ++V +Y K    G ++++ K F  M + N++SWTA+++GYV
Sbjct: 301 VLHGMCIKCGCGDEISVGNAIVSVYVK---HGMLEEAEKSFCGMGERNLVSWTALLSGYV 357

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           ++G   K+A++ FS +++  V  +   FA++L  C    +  +  Q++   VK G   D 
Sbjct: 358 KNG-NGKKALEGFSQILELGVGFDSCCFATLLDGCSECKNLGLGLQIHGFVVKLGYVHDV 416

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            VG +LI +YA+  ++  AR  F SL +KN+VS+N ++  Y    + E A  L  ++   
Sbjct: 417 SVGTALIDLYAKCRKLRSARLVFHSLLDKNIVSFNAILSGYI-GADEEDAMALFSQLRLA 475

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
            +   + TFA LLS ++    + KG+ +HA IIK+GFE+N  + NA+I+MY++C ++  A
Sbjct: 476 DIKPDSVTFARLLSLSADQACLVKGKCLHAYIIKTGFEANPSVGNAVITMYAKCGSIGDA 535

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            Q+F  M   + ISW ++I+ +A HG   +AL +F +M  +   P+ IT ++VL ACS++
Sbjct: 536 CQLFYSMNYLDSISWNAVISAYALHGQGRKALILFEEMKKEEFVPDEITILSVLQACSYS 595

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL+ EG+  F  M  ++GI   +EH+ACMVDLLGR+G L+EA+ FI   P S   L+WRT
Sbjct: 596 GLLEEGFCLFNDMESKYGIKPEIEHFACMVDLLGRAGYLSEAMSFINRSPFSGSPLLWRT 655

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            +  C++HGD   G+ A++ +L+  P++  ++IL+SNLYA  G     A +R  M +  +
Sbjct: 656 LVHVCKLHGDLNFGQIASKHLLDLAPEEAGSYILVSNLYAGGGMLNEAARVRTVMNDLKV 715

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
            KEAG SWIE DNKVH+F   +  HP++ EIYA+LD L  ++K+
Sbjct: 716 SKEAGSSWIEIDNKVHQFVASDKDHPESKEIYAKLDLLKSEMKQ 759


>gi|449479821|ref|XP_004155717.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 745

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 247/718 (34%), Positives = 402/718 (55%), Gaps = 29/718 (4%)

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGF 205
           +++ +ISSY N      + + ++ M        + +   ++++AC+   +  +G  ++GF
Sbjct: 54  NYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQASSGDLGRELHGF 113

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
             K G F SDV V  AL++M+ K    L SA  VFD+M E++ V WT M+    +     
Sbjct: 114 AQKNG-FASDVFVCNALMNMYEKCGC-LVSARLVFDQMPERDVVSWTTMLGCYVRSKAFG 171

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT--GLALDVCVGCS 323
           +A+RL  +M   G       L  +++    L    SG+ +H + +R      ++V +  +
Sbjct: 172 EALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVGDEKMEVSMTTA 231

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMY K    G +  ++++FDR+   +V+SWT +I G ++S  R  E  K F+ M++ +
Sbjct: 232 LIDMYCK---GGCLASAQRLFDRLSKRSVVSWTVMIAGCIRSC-RLDEGAKNFNRMLEEK 287

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + PN  T  S++  CG +   ++ +  + + ++ G  +   +  +LI MY + G++  AR
Sbjct: 288 LFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGKCGQVGYAR 347

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
             F  + +K++  ++ ++ AYA     ++ F L  E+ +  V  +  T  SLLS  +  G
Sbjct: 348 ALFNGVKKKDVKIWSVLISAYAHVSCMDQVFNLFVEMLNNDVKPNNVTMVSLLSLCAEAG 407

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           A+  G+  HA I + G E +  +  ALI+MY++C +V  A  +F E   R++  W +M+ 
Sbjct: 408 ALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAMQRDIRMWNTMMA 467

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           GF+ HG    ALE+F +M + G++PN IT++++  ACSH+GL                  
Sbjct: 468 GFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGL------------------ 509

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             MEHY C+VDLLGR+G L EA   I +MP+  + ++W   L AC++H +  LG+ AA  
Sbjct: 510 --MEHYGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLHKNLALGEVAARK 567

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           ILE DPQ+    +L SN+YASA  W  V ++R+ M    + KE G SWIE    VH F  
Sbjct: 568 ILELDPQNCGYSVLKSNIYASAKRWNDVTSVREAMSHSGMKKEPGLSWIEVSGSVHHFKS 627

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+ +  +T ++Y  + ++ +K++E GY P+T  VL  ++EE+K   L  HSEK+A AFGL
Sbjct: 628 GDKACTQTTKVYEMVTEMCIKLRESGYTPNTAAVLLNIDEEEKESALSYHSEKLATAFGL 687

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IST+   PIR+ KNLR+C DCH A K +S + GR I++RD NRFHH  +G CSC  YW
Sbjct: 688 ISTAPGTPIRIVKNLRICDDCHAATKLLSKIYGRTIIVRDRNRFHHFSEGYCSCMGYW 745



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 260/539 (48%), Gaps = 30/539 (5%)

Query: 35  PFIAQPT-TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSL--LLKSCIRS 91
           PF +Q   T E   N LI    +  + +A F   L  +  +   LD + L  LLK+C ++
Sbjct: 42  PFFSQSHFTPEANYNLLISSYTNNHLPQASFNCYLHMRSNDAAALDNFILPSLLKACAQA 101

Query: 92  RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
            +  LG+ +H    ++    +  + N+L+++Y KCG L  A  +F  M  +RD+VSW++M
Sbjct: 102 SSGDLGRELHGFAQKNGFASDVFVCNALMNMYEKCGCLVSARLVFDQM-PERDVVSWTTM 160

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CG 210
           +  YV      +A+ +  EM  +G   +     ++I    N  ++  G  ++G++++  G
Sbjct: 161 LGCYVRSKAFGEALRLVREMQFVGVKLSGVALISLIAVFGNLLDMKSGRAVHGYIVRNVG 220

Query: 211 YFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
               +V +  ALIDM+ KG   L SA ++FD++++++ V WT+MI  C +     +  + 
Sbjct: 221 DEKMEVSMTTALIDMYCKGGC-LASAQRLFDRLSKRSVVSWTVMIAGCIRSCRLDEGAKN 279

Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           F  M+     P+  TL  +++ C  +     GK  H++ +R G  + + +  +L+DMY K
Sbjct: 280 FNRMLEEKLFPNEITLLSLITECGFVGTLDLGKWFHAYLLRNGFGMSLALVTALIDMYGK 339

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   G V  +R +F+ +   +V  W+ +I+ Y      D +   LF +M+   V PN+ T
Sbjct: 340 C---GQVGYARALFNGVKKKDVKIWSVLISAYAHVSCMD-QVFNLFVEMLNNDVKPNNVT 395

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
             S+L  C      ++ +  + +  + G  +D  +  +LI+MYA+ G +  AR  F    
Sbjct: 396 MVSLLSLCAEAGALDLGKWTHAYINRHGLEVDVILETALINMYAKCGDVTIARSLFNEAM 455

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           ++++  +NTM+  ++ +   ++A EL  E+E  GV  +  TF S+    S  G +     
Sbjct: 456 QRDIRMWNTMMAGFSMHGCGKEALELFSEMESHGVEPNDITFVSIFHACSHSGLMEH--- 512

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
                           Y  L+ +  R  +++ A  + + M  R N I W +++     H
Sbjct: 513 ----------------YGCLVDLLGRAGHLDEAHNIIENMPMRPNTIIWGALLAACKLH 555


>gi|224143620|ref|XP_002325018.1| predicted protein [Populus trichocarpa]
 gi|222866452|gb|EEF03583.1| predicted protein [Populus trichocarpa]
          Length = 695

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 230/642 (35%), Positives = 372/642 (57%), Gaps = 41/642 (6%)

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           A++ ++ K  + +E    +FD M  +++V +  +I+     G    A+ +FL M   G  
Sbjct: 94  AMLSLYAKSGL-VEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLK 152

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P  +T   V++AC++L     GKQ+H   I   L  +V V  +L D+YA+C   G +D +
Sbjct: 153 PTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFVCNALTDLYARC---GEIDQA 209

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R++FDRM+  NV++W  +I+GY+++   +K  + LF +M    + P+  T +SVL A   
Sbjct: 210 RRLFDRMVIRNVVTWNLMISGYLKNRQPEK-CIDLFHEMQVSNLKPDQVTASSVLGA--- 265

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                                           Y ++G +++ARK F  + EK+ V +  M
Sbjct: 266 --------------------------------YIQAGYIDEARKVFGEIREKDEVCWTIM 293

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +   A+N   E A  L  E+         YT +S++S  + + ++  G+ +H +    G 
Sbjct: 294 IVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHGQVVHGKAFLMGV 353

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
             +  + +AL+ MY +C     A+ +F  M+ RNV+SW SMI G+A +G    AL ++  
Sbjct: 354 NDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALNGQDLEALSLYEN 413

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           ML + +KP+ +T++ VLSAC HAGL+ EG ++F SM D+HG+    +HYACMV+L GRSG
Sbjct: 414 MLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSG 473

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            + +A++ I SM    + L+W T L  C + GD + G+ AA  ++E +P +   +I+LSN
Sbjct: 474 HMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCLIELNPFNAVPYIMLSN 533

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           +YA+ G W+ VA+IR  MK +++ K +  SWIE DN+VHKF   + +HP    I+ +L++
Sbjct: 534 MYAARGRWKDVASIRSLMKSKHVKKFSAYSWIEIDNEVHKFVADDRTHPDAKIIHVQLNR 593

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS-KPIRVFKNLR 819
           L  K++E G+ P+TN VLH+  E++K++ +  HSEK+A+A+GLI       PIR+ KN+R
Sbjct: 594 LIRKLQEAGFSPNTNLVLHDFGEDEKLESINYHSEKLALAYGLIKKPHGVTPIRIIKNIR 653

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            C DCH  +K++S +T R ++LRDSNRFHH  +GKCSC DYW
Sbjct: 654 TCADCHIFMKFVSNITRRPVILRDSNRFHHFVEGKCSCKDYW 695



 Score =  182 bits (461), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 136/536 (25%), Positives = 250/536 (46%), Gaps = 80/536 (14%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN-SVILNSLISLYSKCGDLNEANKIFK 137
           + Y+ L   C R+ +    K + S +     +PN + I N L++LY+K G+++ A K+F 
Sbjct: 23  ECYTRLALECFRASDVDQAKRLKSHMHLHLFKPNDTFIHNRLLNLYAKSGEISHARKLFD 82

Query: 138 SMGNK------------------------------RDIVSWSSMISSYVNRGKQVDAIHM 167
            M  +                              RD VS++++IS +   G+   A+ +
Sbjct: 83  EMTQRDNFSWNAMLSLYAKSGLVEDLRVIFDNMPSRDSVSYNTVISGFAGNGRGGPALGV 142

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F+ M + G  P EY   +V+ AC+   ++  G  I+G ++ C     +V V  AL D++ 
Sbjct: 143 FLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICN-LGGNVFVCNALTDLYA 201

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           +   +++ A ++FD+M  +N V W LMI+   +   P   I LF +M +S   PD+ T S
Sbjct: 202 RCG-EIDQARRLFDRMVIRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSNLKPDQVTAS 260

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            V+ A                                   Y +    G +D++RKVF  +
Sbjct: 261 SVLGA-----------------------------------YIQA---GYIDEARKVFGEI 282

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            + + + WT +I G  Q+ G++++A+ LFS+M+     P+ +T +SV+ +C  L      
Sbjct: 283 REKDEVCWTIMIVGCAQN-GKEEDALLLFSEMLLENARPDGYTISSVVSSCAKLASLYHG 341

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           + V+  A   G   D  V ++L+ MY + G   DA   F ++  +N+VS+N+M+  YA N
Sbjct: 342 QVVHGKAFLMGVNDDLLVSSALVDMYCKCGVTRDAWTIFSTMQTRNVVSWNSMIGGYALN 401

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCI 526
               +A  L   + +  +   + TF  +LS     G + +G++    +  + G E     
Sbjct: 402 GQDLEALSLYENMLEENLKPDSVTFVGVLSACVHAGLVEEGKEYFCSMSDQHGLEPTPDH 461

Query: 527 YNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMIT-----GFAKHG-FAARAL 575
           Y  +++++ R  +++ A  +   M ++ N + WT++++     G  KHG  AAR L
Sbjct: 462 YACMVNLFGRSGHMDKAVDLISSMSQEPNSLIWTTVLSVCVMKGDIKHGEMAARCL 517



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 197/409 (48%), Gaps = 65/409 (15%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +GR   A+     M ++G  P   T+  +L +C +  +   GK +H  +    L  N  +
Sbjct: 133 NGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRRGKQIHGRIIICNLGGNVFV 192

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L  LY++CG++++A ++F  M   R++V+W+ MIS Y+   +    I +F EM    
Sbjct: 193 CNALTDLYARCGEIDQARRLFDRMV-IRNVVTWNLMISGYLKNRQPEKCIDLFHEMQVSN 251

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P++   S+V+                G  ++ GY D                      
Sbjct: 252 LKPDQVTASSVL----------------GAYIQAGYIDE--------------------- 274

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A KVF ++ EK+ V WT+MI  C Q G   DA+ LF +M+L    PD +T+S VVS+C++
Sbjct: 275 ARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENARPDGYTISSVVSSCAK 334

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     G+ +H  A   G+  D+ V  +LVDMY KC   G   D+  +F  M   NV+SW
Sbjct: 335 LASLYHGQVVHGKAFLMGVNDDLLVSSALVDMYCKC---GVTRDAWTIFSTMQTRNVVSW 391

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            ++I GY  + G+D EA+ L+ +M++  + P+  TF  VL AC           V+   V
Sbjct: 392 NSMIGGYALN-GQDLEALSLYENMLEENLKPDSVTFVGVLSAC-----------VHAGLV 439

Query: 416 KRGR----ALDDCVG--------NSLISMYARSGRMEDARKAFESLFEK 452
           + G+    ++ D  G          +++++ RSG M+ A     S+ ++
Sbjct: 440 EEGKEYFCSMSDQHGLEPTPDHYACMVNLFGRSGHMDKAVDLISSMSQE 488



 Score =  130 bits (328), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 97/403 (24%), Positives = 181/403 (44%), Gaps = 72/403 (17%)

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG---------- 366
           D  +   L+++YAK    G +  +RK+FD M   +  SW A+++ Y +SG          
Sbjct: 57  DTFIHNRLLNLYAK---SGEISHARKLFDEMTQRDNFSWNAMLSLYAKSGLVEDLRVIFD 113

Query: 367 --------------------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
                               GR   A+ +F  M +  + P  +T  SVL AC  LLD   
Sbjct: 114 NMPSRDSVSYNTVISGFAGNGRGGPALGVFLRMQKEGLKPTEYTHVSVLNACTQLLDLRR 173

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            +Q++   +      +  V N+L  +YAR G ++ AR+ F+ +  +N+V++N M+  Y K
Sbjct: 174 GKQIHGRIIICNLGGNVFVCNALTDLYARCGEIDQARRLFDRMVIRNVVTWNLMISGYLK 233

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N   EK  +L HE++ + +     T +S+L                   I++G+      
Sbjct: 234 NRQPEKCIDLFHEMQVSNLKPDQVTASSVLGA----------------YIQAGY------ 271

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
                        ++ A +VF E+ +++ + WT MI G A++G    AL +F +ML +  
Sbjct: 272 -------------IDEARKVFGEIREKDEVCWTIMIVGCAQNGKEEDALLLFSEMLLENA 318

Query: 587 KPNGITYIAVLSACSHAGLISEGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +P+G T  +V+S+C+    +  G   H ++     G+   +   + +VD+  + G   +A
Sbjct: 319 RPDGYTISSVVSSCAKLASLYHGQVVHGKAFL--MGVNDDLLVSSALVDMYCKCGVTRDA 376

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
                +M  + +V+ W + +G   ++G         E +LE++
Sbjct: 377 WTIFSTMQ-TRNVVSWNSMIGGYALNGQDLEALSLYENMLEEN 418


>gi|356568485|ref|XP_003552441.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 243/684 (35%), Positives = 381/684 (55%), Gaps = 46/684 (6%)

Query: 222  LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
            L+ ++ K S ++  A K+FD++ ++NT  WT++I+   + G       LF +M   G  P
Sbjct: 330  LLTLYAK-SNNMAHAQKLFDEIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACP 388

Query: 282  DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV-------- 333
            +++TLS V+  CS       GK +H+W +R G+ +DV +G S++D+Y KC V        
Sbjct: 389  NQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLF 448

Query: 334  --------------------DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
                                 G V+ S  +F R+   +V+SW  I+ G +Q G  ++ A+
Sbjct: 449  ELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCG-YERHAL 507

Query: 374  KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            +    M++     +  TF+  L    +L    +  Q++   +K G   D  + +SL+ MY
Sbjct: 508  EQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVEMY 567

Query: 434  ARSGRMEDA------------RKAFESLFEK----NLVSYNTMVDAYAKNLNSEKAFELL 477
             + GRM+ A            RK    +  K     +VS+ +MV  Y  N   E   +  
Sbjct: 568  CKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNGKYEDGLKTF 627

Query: 478  HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
              +    V     T  +++S  ++ G +  G  +HA + K G   +  + ++LI MYS+ 
Sbjct: 628  RLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLIDMYSKS 687

Query: 538  ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             +++ A+ VF++  + N++ WTSMI+G+A HG    A+ +F +ML  GI PN +T++ VL
Sbjct: 688  GSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEVTFLGVL 747

Query: 598  SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
            +ACSHAGLI EG ++FR M D + I   +EH   MVDL GR+G LT+   FI    +S  
Sbjct: 748  NACSHAGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTKTKNFIFKNGISHL 807

Query: 658  VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
              VW++FL +CR+H + E+GK  +EM+L+  P DP A++LLSN+ AS   W+  A +R  
Sbjct: 808  TSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSL 867

Query: 718  MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
            M +R + K+ G SWI+  +++H F +G+ SHP+  EIY+ LD L  ++KE GY  D   V
Sbjct: 868  MHQRGVKKQPGQSWIQLKDQIHTFVMGDRSHPQDDEIYSYLDILIGRLKEIGYSFDVKLV 927

Query: 778  LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
            + ++EEEQ    +  HSEK+AV FG+I+T+   PIR+ KNLR+C DCH  IKY S +  R
Sbjct: 928  MQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDR 987

Query: 838  EIVLRDSNRFHHIKDGKCSCNDYW 861
            EI++RD +RFHH K G CSC DYW
Sbjct: 988  EIIVRDIHRFHHFKHGSCSCGDYW 1011



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 124/474 (26%), Positives = 224/474 (47%), Gaps = 59/474 (12%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N L++LY+K  ++  A K+F  +  +R+  +W+ +IS +   G      ++F EM   G 
Sbjct: 328 NHLLTLYAKSNNMAHAQKLFDEI-PQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGA 386

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV----- 231
           CPN+Y  S+V++ CS   N+ +G  ++ ++L+ G  D DV +G +++D+++K  V     
Sbjct: 387 CPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNG-IDVDVVLGNSILDLYLKCKVFEYAE 445

Query: 232 -------------------------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
                                    D+E +  +F ++  K+ V W  ++    Q G  R 
Sbjct: 446 RLFELMNEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQCGYERH 505

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+     M+  G      T S  +   S L     G+QLH   ++ G   D  +  SLV+
Sbjct: 506 ALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDGFIRSSLVE 565

Query: 327 MYAKCTVDGSVDDSRKVF-DRMLD---------------HNVMSWTAIITGYVQSGGRDK 370
           MY KC   G +D +  +  D  LD                 ++SW ++++GYV + G+ +
Sbjct: 566 MYCKC---GRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWN-GKYE 621

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           + +K F  M++  V  +  T  +++ AC N         V+ +  K G  +D  VG+SLI
Sbjct: 622 DGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGSSLI 681

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            MY++SG ++DA   F    E N+V + +M+  YA +     A  L  E+ + G+  +  
Sbjct: 682 DMYSKSGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQGIIPNEV 741

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESN----HCIYNALISMYSRCANV 540
           TF  +L+  S  G I +G + + R++K  +  N    HC   +++ +Y R  ++
Sbjct: 742 TFLGVLNACSHAGLIEEGCR-YFRMMKDAYCINPGVEHC--TSMVDLYGRAGHL 792



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 215/443 (48%), Gaps = 63/443 (14%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  KG  P+  T S +LK C    N  LGK VH+ + R+ ++ + V+ NS++ LY KC  
Sbjct: 381 MQAKGACPNQYTLSSVLKCCSLDNNLQLGKGVHAWMLRNGIDVDVVLGNSILDLYLKCKV 440

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE---------------MLE 173
              A ++F+ M N+ D+VSW+ MI +Y+  G    ++ MF                 +L+
Sbjct: 441 FEYAERLFELM-NEGDVVSWNIMIGAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLLQ 499

Query: 174 LGF-------------CPNEY---CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G+             C  E+    FS  +   S+  +V +G  ++G +LK G FDSD  
Sbjct: 500 CGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFG-FDSDGF 558

Query: 218 VGCALIDMFVK-GSVDLESAY--------------KVFDKMTEKNTVGWTLMITRCTQLG 262
           +  +L++M+ K G +D  S                +V  K  +   V W  M++     G
Sbjct: 559 IRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWNG 618

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              D ++ F  M+    + D  T++ ++SAC+   +   G+ +H++  + G  +D  VG 
Sbjct: 619 KYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGHRIDAYVGS 678

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           SL+DMY+K    GS+DD+  VF +  + N++ WT++I+GY    G+   A+ LF +M+  
Sbjct: 679 SLIDMYSK---SGSLDDAWMVFRQSNEPNIVMWTSMISGYALH-GQGMHAIGLFEEMLNQ 734

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRALDDCVGN--SLISMYARSGR 438
            + PN  TF  VL AC +   + + E+   Y   +K    ++  V +  S++ +Y R+G 
Sbjct: 735 GIIPNEVTFLGVLNACSH---AGLIEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGH 791

Query: 439 MEDARKAFESLFEKNLVSYNTMV 461
           +   +    +   KN +S+ T V
Sbjct: 792 LTKTK----NFIFKNGISHLTSV 810



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 100/355 (28%), Positives = 168/355 (47%), Gaps = 33/355 (9%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L  G  + A+  L  M + G      T+S+ L       +  LG+ +H ++ +   + + 
Sbjct: 498 LQCGYERHALEQLYCMVECGTEFSAVTFSIALILASSLSHVELGRQLHGMVLKFGFDSDG 557

Query: 114 VILNSLISLYSKCGDLNEANKIFKSM-------GNKR--------DIVSWSSMISSYVNR 158
            I +SL+ +Y KCG +++A+ I + +       GN R         IVSW SM+S YV  
Sbjct: 558 FIRSSLVEMYCKCGRMDKASIILRDVPLDVLRKGNARVSYKEPKAGIVSWGSMVSGYVWN 617

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
           GK  D +  F  M+      +    + +I AC+N   +  G  ++ ++ K G+   D  V
Sbjct: 618 GKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYVQKIGH-RIDAYV 676

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
           G +LIDM+ K S  L+ A+ VF +  E N V WT MI+     G    AI LF +M+  G
Sbjct: 677 GSSLIDMYSK-SGSLDDAWMVFRQSNEPNIVMWTSMISGYALHGQGMHAIGLFEEMLNQG 735

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLH-----SWAIRTGLALDVCVGCSLVDMYAKCTV 333
            +P+  T  GV++ACS   L   G +       ++ I  G  ++ C   S+VD+Y +   
Sbjct: 736 IIPNEVTFLGVLNACSHAGLIEEGCRYFRMMKDAYCINPG--VEHCT--SMVDLYGRA-- 789

Query: 334 DGSVDDSRK-VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
            G +  ++  +F   + H    W + ++       ++ E  K  S+M+  QVAP+
Sbjct: 790 -GHLTKTKNFIFKNGISHLTSVWKSFLSSCRLH--KNVEMGKWVSEMLL-QVAPS 840



 Score = 90.1 bits (222), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/269 (24%), Positives = 128/269 (47%), Gaps = 31/269 (11%)

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
           HFT ++     G L         +   VK G        N L+++YA+S  M  A+K F+
Sbjct: 298 HFTLSNSPPPLGTL---------HALYVKNGSLQTLNPANHLLTLYAKSNNMAHAQKLFD 348

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            + ++N  ++  ++  +A+  +SE  F L  E++  G   + YT +S+L   S    +  
Sbjct: 349 EIPQRNTQTWTILISGFARAGSSEMVFNLFREMQAKGACPNQYTLSSVLKCCSLDNNLQL 408

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+ +HA ++++G + +  + N+++ +Y +C   E A ++F+ M + +V+SW  MI  + +
Sbjct: 409 GKGVHAWMLRNGIDVDVVLGNSILDLYLKCKVFEYAERLFELMNEGDVVSWNIMIGAYLR 468

Query: 568 HGFAARALEIFYKM-LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
            G   ++L++F ++   D +  N I            GL+  G       Y+ H     +
Sbjct: 469 AGDVEKSLDMFRRLPYKDVVSWNTIV----------DGLLQCG-------YERHA----L 507

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           E   CMV+      ++T ++  I +  LS
Sbjct: 508 EQLYCMVECGTEFSAVTFSIALILASSLS 536


>gi|334187432|ref|NP_196098.3| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635619|sp|Q9LZ19.2|PP364_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g04780
 gi|332003400|gb|AED90783.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 635

 Score =  448 bits (1153), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 220/585 (37%), Positives = 361/585 (61%), Gaps = 4/585 (0%)

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           S    +R  +  ++  C+        K  H   IR  L  DV +   L++ Y+KC   G 
Sbjct: 55  SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC---GF 111

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           V+ +R+VFD ML+ +++SW  +I  Y ++   + EA+ +F +M       + FT +SVL 
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNR-MESEALDIFLEMRNEGFKFSEFTISSVLS 170

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           ACG   D+   ++++  +VK    L+  VG +L+ +YA+ G ++DA + FES+ +K+ V+
Sbjct: 171 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 230

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +++MV  Y +N N E+A  L    +   +  + +T +S++   S++ A+ +G+Q+HA I 
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           KSGF SN  + ++ + MY++C ++  ++ +F E++++N+  W ++I+GFAKH      + 
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 350

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F KM  DG+ PN +T+ ++LS C H GL+ EG + F+ M   +G+   + HY+CMVD+L
Sbjct: 351 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GR+G L+EA E I+S+P      +W + L +CRV+ + EL + AAE + E +P++   H+
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHV 470

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+YA+   WE +A  RK +++ ++ K  G SWI+  +KVH F VGE+ HP+  EI +
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICS 530

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            LD L +K ++FGY P     LH++E  +K + L QHSEK+A+ FGL+   +S P+R+ K
Sbjct: 531 TLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMK 590

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLR+C DCH  +K  SM T R I++RD NRFHH  DG CSC D+W
Sbjct: 591 NLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/402 (29%), Positives = 198/402 (49%), Gaps = 47/402 (11%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L+ C R+      K  H  + R  LE +  +LN LI+ YSKCG +  A ++F  M  +R
Sbjct: 67  ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML-ER 125

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW++MI  Y     + +A+ +F+EM   GF  +E+  S+V+ AC    +      ++
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
              +K    D ++ VG AL+D++ K  + ++ A +VF+ M +K++V W+ M+    Q   
Sbjct: 186 CLSVK-TCIDLNLYVGTALLDLYAKCGM-IKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ L+          ++FTLS V+ ACS L     GKQ+H+   ++G   +V V  S
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
            VDMYAKC   GS+ +S  +F  + + N+  W  II+G+ +   R KE + LF  M Q  
Sbjct: 304 AVDMYAKC---GSLRESYIIFSEVQEKNLELWNTIISGFAKH-ARPKEVMILFEKMQQDG 359

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + PN  TF+S+L  CG+                                   +G +E+ R
Sbjct: 360 MHPNEVTFSSLLSVCGH-----------------------------------TGLVEEGR 384

Query: 444 KAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           + F+ +        N+V Y+ MVD   +     +A+EL+  I
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 3/163 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK +H+++ +S    N  + +S + +Y+KCG L E+  IF  +  K ++  W+++IS + 
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFA 340

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              +  + + +F +M + G  PNE  FS+++  C +T  V  G   +  +        +V
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 400

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
                ++D+  +  + L  AY++   +    T   W  ++  C
Sbjct: 401 VHYSCMVDILGRAGL-LSEAYELIKSIPFDPTASIWGSLLASC 442



 Score = 41.2 bits (95), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL-TRSKLEPNSVI 115
            R ++ +   + M Q G HP+  T+S LL  C  +     G+    L+ T   L PN V 
Sbjct: 343 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 402

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            + ++ +  + G L+EA ++ KS+        W S+++S
Sbjct: 403 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441


>gi|22093801|dbj|BAC07088.1| selenium-binding protein-like [Oryza sativa Japonica Group]
          Length = 643

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/632 (38%), Positives = 360/632 (56%), Gaps = 24/632 (3%)

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILS----GFLPDRFTLSGVVSACSELELFTSGKQLH 306
           W   I      G    AI LFL M  S      +P   +L   + +C+ L L T    LH
Sbjct: 15  WAYQIRMAASQGQFLHAISLFLQMRASVAPRSSVPA--SLPAALKSCAGLGLCTLAASLH 72

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKC------------TVDGSVDDS-----RKVFDRMLD 349
           + AIR+G   D     +L+++  K             + +G ++ +     RKVFD ML+
Sbjct: 73  ALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEMLE 132

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            + +SW  +I G  +   R +EA+ +  +M +    P+ FT ++VL       D      
Sbjct: 133 RDAVSWNTLILGCAEHK-RHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV 191

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+ +A+K G   D  VG+SLI MYA   +M+ + K F+S  + + V +N+M+  YA+N +
Sbjct: 192 VHGYAIKNGFDNDVFVGSSLIDMYANCTQMDYSMKVFDSFSDCDAVLWNSMLAGYAQNGS 251

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E+A  +   +   GV     TF+SL+    ++  +  G+Q+HA +I++ F  N  I ++
Sbjct: 252 VEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDNIFISSS 311

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MY +C NV+ A +VF  ++  +++SWT+MI G+A HG    A  +F +M    +KPN
Sbjct: 312 LIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPN 371

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            IT++AVL+ACSHAGL+  GWK+F SM +++G V  +EH A + D LGR+G L EA  FI
Sbjct: 372 HITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAGDLDEAYNFI 431

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
             M +     VW T L ACRVH +T L +  A+ I E +P+   +H++LSN+Y+++G W 
Sbjct: 432 SEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFELEPKSMGSHVILSNMYSASGRWN 491

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
             A +RK M+ + + KE  CSWIE  NK+H F   + SHP    I   L+  + ++   G
Sbjct: 492 EAAQLRKSMRIKGMKKEPACSWIEVKNKLHVFIAHDKSHPWYDRIIDALNVYSEQMIRQG 551

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+P+   VL ++EEEQK + L  HSEK+A+ FG+IST     IRV KNLRVC DCH A K
Sbjct: 552 YVPNMEDVLQDIEEEQKREVLCGHSEKLAIVFGIISTPPGTTIRVMKNLRVCVDCHIATK 611

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +IS +  REIV+RD NRFH  KDG CSC D+W
Sbjct: 612 FISKIVAREIVVRDVNRFHRFKDGNCSCGDFW 643



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 236/479 (49%), Gaps = 38/479 (7%)

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC---FSAVIRACSNTENVAIGHIIY 203
           SW+  I    ++G+ + AI +F++M      P         A +++C+      +   ++
Sbjct: 14  SWAYQIRMAASQGQFLHAISLFLQM-RASVAPRSSVPASLPAALKSCAGLGLCTLAASLH 72

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVK--------------GSVDLESA-----YKVFDKMT 244
              ++ G F +D     AL+++ +K              G   LESA      KVFD+M 
Sbjct: 73  ALAIRSGSF-ADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGLESAAYESMRKVFDEML 131

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           E++ V W  +I  C +    ++A+ +  +M   GF+PD FTLS V+   +E      G  
Sbjct: 132 ERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMV 191

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H +AI+ G   DV VG SL+DMYA CT    +D S KVFD   D + + W +++ GY Q
Sbjct: 192 VHGYAIKNGFDNDVFVGSSLIDMYANCT---QMDYSMKVFDSFSDCDAVLWNSMLAGYAQ 248

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +G  + EA+ +F  M+Q  V P   TF+S++ A GNL    + +Q++ + + R R  D+ 
Sbjct: 249 NGSVE-EALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLI-RARFNDNI 306

Query: 425 -VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            + +SLI MY + G ++ AR+ F  +   ++VS+  M+  YA +  + +AF L   +E  
Sbjct: 307 FISSSLIDMYCKCGNVDIARRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELG 366

Query: 484 GVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESN--HCIYNALISMYSRCANV 540
            V  +  TF ++L+  S  G +  G +  ++   + GF  +  HC   AL     R  ++
Sbjct: 367 NVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCA--ALADTLGRAGDL 424

Query: 541 EAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           + A+    EM+ +   S W++++     H     A E+  K+    ++P  +    +LS
Sbjct: 425 DEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIFE--LEPKSMGSHVILS 481



 Score =  166 bits (420), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 169/334 (50%), Gaps = 27/334 (8%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC---------------GDL 129
           LKSC       L   +H+L  RS    +    N+L++L  K                G L
Sbjct: 56  LKSCAGLGLCTLAASLHALAIRSGSFADRFTANALLNLCIKLPGFHHPFGTNGPSGEGGL 115

Query: 130 NEA-----NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
             A      K+F  M  +RD VSW+++I       +  +A+ M  EM   GF P+ +  S
Sbjct: 116 ESAAYESMRKVFDEM-LERDAVSWNTLILGCAEHKRHQEALSMVREMWRDGFMPDTFTLS 174

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            V+   +   ++  G +++G+ +K G FD+DV VG +LIDM+      ++ + KVFD  +
Sbjct: 175 TVLPIFAECADIKRGMVVHGYAIKNG-FDNDVFVGSSLIDMYAN-CTQMDYSMKVFDSFS 232

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           + + V W  M+    Q G   +A+ +F  M+ +G  P   T S ++ A   L L   GKQ
Sbjct: 233 DCDAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQ 292

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH++ IR     ++ +  SL+DMY KC   G+VD +R+VF+ +   +++SWTA+I GY  
Sbjct: 293 LHAYLIRARFNDNIFISSSLIDMYCKC---GNVDIARRVFNGIQSPDIVSWTAMIMGYAL 349

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            G    EA  LF  M  G V PNH TF +VL AC
Sbjct: 350 HGP-TTEAFVLFERMELGNVKPNHITFLAVLTAC 382



 Score =  113 bits (283), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 102/400 (25%), Positives = 184/400 (46%), Gaps = 47/400 (11%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R Q+A+  +  M + G  PD  T S +L       +   G +VH    ++  + +  + +
Sbjct: 150 RHQEALSMVREMWRDGFMPDTFTLSTVLPIFAECADIKRGMVVHGYAIKNGFDNDVFVGS 209

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           SLI +Y+ C  ++ + K+F S  +  D V W+SM++ Y   G   +A+ +F  ML+ G  
Sbjct: 210 SLIDMYANCTQMDYSMKVFDSFSDC-DAVLWNSMLAGYAQNGSVEEALGIFRRMLQAGVR 268

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
           P    FS++I A  N   + +G  ++ +L++   F+ ++ +  +LIDM+ K G+VD+  A
Sbjct: 269 PVPVTFSSLIPAFGNLSLLRLGKQLHAYLIR-ARFNDNIFISSSLIDMYCKCGNVDI--A 325

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF+ +   + V WT MI      G   +A  LF  M L    P+  T   V++ACS  
Sbjct: 326 RRVFNGIQSPDIVSWTAMIMGYALHGPTTEAFVLFERMELGNVKPNHITFLAVLTACSHA 385

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L  +G +  +               S+ + Y               F   L+H      
Sbjct: 386 GLVDNGWKYFN---------------SMSNQYG--------------FVPSLEH-----C 411

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           A +   +   G   EA    S+M   ++ P    ++++L+AC    ++ +AE+V   A K
Sbjct: 412 AALADTLGRAGDLDEAYNFISEM---KIKPTSSVWSTLLRACRVHKNTVLAEEV---AKK 465

Query: 417 RGRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
                   +G+ +I  +MY+ SGR  +A +  +S+  K +
Sbjct: 466 IFELEPKSMGSHVILSNMYSASGRWNEAAQLRKSMRIKGM 505



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 143/318 (44%), Gaps = 17/318 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G V++A+     M Q G  P   T+S L+ +        LGK +H+ L R++   N
Sbjct: 246 YAQNGSVEEALGIFRRMLQAGVRPVPVTFSSLIPAFGNLSLLRLGKQLHAYLIRARFNDN 305

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I +SLI +Y KCG+++ A ++F  + +  DIVSW++MI  Y   G   +A  +F E +
Sbjct: 306 IFISSSLIDMYCKCGNVDIARRVFNGIQSP-DIVSWTAMIMGYALHGPTTEAFVLF-ERM 363

Query: 173 ELGFC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           ELG   PN   F AV+ ACS+   V  G   +  +     F   +    AL D   +   
Sbjct: 364 ELGNVKPNHITFLAVLTACSHAGLVDNGWKYFNSMSNQYGFVPSLEHCAALADTLGRAG- 422

Query: 232 DLESAYKVFDKMTEKNTVG-WTLMITRC----TQLGCPRDAIRLFLDMILSGFLPDRFTL 286
           DL+ AY    +M  K T   W+ ++  C      +     A ++F   +    +     L
Sbjct: 423 DLDEAYNFISEMKIKPTSSVWSTLLRACRVHKNTVLAEEVAKKIF--ELEPKSMGSHVIL 480

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           S + SA      +    QL       G+  +    CS +++  K  V  + D S   +DR
Sbjct: 481 SNMYSASGR---WNEAAQLRKSMRIKGMKKE--PACSWIEVKNKLHVFIAHDKSHPWYDR 535

Query: 347 MLDH-NVMSWTAIITGYV 363
           ++D  NV S   I  GYV
Sbjct: 536 IIDALNVYSEQMIRQGYV 553


>gi|255545098|ref|XP_002513610.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547518|gb|EEF49013.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 660

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 246/661 (37%), Positives = 378/661 (57%), Gaps = 41/661 (6%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++G +L   Y   +  VG  L+ ++   G   L  A  +FD++T+KN V + +MI     
Sbjct: 40  LHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGL--ARHIFDEITDKNVVFFNVMIRSYVN 97

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
               +DA+ ++  M   GF+PD +T   V+ A S  +    G Q+H   ++ GL L++ V
Sbjct: 98  NHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLNLYV 157

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           G  L+ MY KC    S+ ++++V D +   +V+SW ++++ Y Q+G R  +A++L  +M 
Sbjct: 158 GNGLIAMYGKCK---SLKEAQQVLDEIPCRDVVSWNSMVSVYAQNG-RFNDALELCREME 213

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              + PN  T AS+L A  N    NV                         +Y +     
Sbjct: 214 ALNLKPNDCTMASLLPAVTNTTSDNV-------------------------LYVK----- 243

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
              + F  L +K+++S+N M+  Y  N   ++A  L  ++E  GV     +  S+L    
Sbjct: 244 ---EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYG 300

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            + A+  G ++H    +     N  + NALI MY++C  +  A  VF +M+ R+V+SWTS
Sbjct: 301 DLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTS 360

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I+ + K G    A+ +F +M   G+ P+ I +++VL+ACSHAGL+ +G  +F  M  E 
Sbjct: 361 IISAYGKCGQGRDAVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLM-AEC 419

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI  ++EH+AC+VDLLGR+G + EA  FIR MPL  D  VW   L ACRV+ +  +G  A
Sbjct: 420 GITPKLEHFACVVDLLGRAGKIDEAYGFIRQMPLEPDERVWGPLLSACRVYSNMNIGILA 479

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +L  +P+    ++LLSN+YA AG W  VA IR  M+ + + K  G S +E ++ VH 
Sbjct: 480 ADKLLMLNPEHSGYYVLLSNIYAKAGRWADVAAIRSIMERKGIKKLPGISNVELNDGVHT 539

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F  G+ SHP++ +IY ELD L  K+KE GY+P+T+  LH++EEE K  +L  HSEK+AVA
Sbjct: 540 FLAGDHSHPQSKKIYEELDVLVGKMKELGYMPETDSALHDVEEEDKEYHLAVHSEKLAVA 599

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           F +I+T    PIRV KNLRVCGDCH A K IS +  REI++RD++RFHH ++G CSC DY
Sbjct: 600 FAIINTKPGTPIRVTKNLRVCGDCHVAAKLISKIAEREIIIRDTHRFHHFQEGCCSCGDY 659

Query: 861 W 861
           W
Sbjct: 660 W 660



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/354 (30%), Positives = 184/354 (51%), Gaps = 44/354 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+   + A+     M  +G  PD+ TY  +LK+  RS +  +G  +H  + +  L+ N
Sbjct: 95  YVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDLN 154

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N LI++Y KC  L EA ++   +   RD+VSW+SM+S Y   G+  DA+ +  EM 
Sbjct: 155 LYVGNGLIAMYGKCKSLKEAQQVLDEIPC-RDVVSWNSMVSVYAQNGRFNDALELCREME 213

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            L   PN+   ++++ A +NT +  +                          ++VK    
Sbjct: 214 ALNLKPNDCTMASLLPAVTNTTSDNV--------------------------LYVK---- 243

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
                ++F K+T+K+ + W +MI        P++A+ L+  M  +G  PD  ++  V+ A
Sbjct: 244 -----EMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPA 298

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
             +L   + G+++H +A R  L  ++ +  +L+DMYAKC   G + D+R VF++M   +V
Sbjct: 299 YGDLSALSLGRRVHKFAERKKLLPNLLLENALIDMYAKC---GCLRDARAVFNQMQFRDV 355

Query: 353 MSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLD 403
           +SWT+II+ Y + G GRD  AV +F++M    + P+   F SVL AC    LLD
Sbjct: 356 VSWTSIISAYGKCGQGRD--AVAVFAEMRNSGLNPDSIAFVSVLAACSHAGLLD 407



 Score =  154 bits (389), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 224/488 (45%), Gaps = 56/488 (11%)

Query: 64  FTLDLMTQ-KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           FT DL  +    +PD++T               L KL   +L    L  N  +   L+ +
Sbjct: 19  FTEDLCNRILDQYPDINT---------------LKKLHGKVLNDQYLRWNPSVGIKLMRV 63

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
           Y+ CG+   A  IF  + +K ++V ++ MI SYVN     DA+ ++  M   GF P+ Y 
Sbjct: 64  YAACGEPGLARHIFDEITDK-NVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYT 122

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           +  V++A S ++++ +G  I+G +LK G  D ++ VG  LI M+ K    L+ A +V D+
Sbjct: 123 YPCVLKASSRSDSLWVGLQIHGAVLKIG-LDLNLYVGNGLIAMYGKCK-SLKEAQQVLDE 180

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           +  ++ V W  M++   Q G   DA+ L  +M      P+  T++ ++ A +        
Sbjct: 181 IPCRDVVSWNSMVSVYAQNGRFNDALELCREMEALNLKPNDCTMASLLPAVTN------- 233

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
                                        T   +V   +++F ++   +V+SW  +I  Y
Sbjct: 234 -----------------------------TTSDNVLYVKEMFLKLTKKSVISWNVMIAMY 264

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V +    KEAV L+S M    V P+  +  SVL A G+L   ++  +V+  A ++    +
Sbjct: 265 VNN-SMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPN 323

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             + N+LI MYA+ G + DAR  F  +  +++VS+ +++ AY K      A  +  E+ +
Sbjct: 324 LLLENALIDMYAKCGCLRDARAVFNQMQFRDVVSWTSIISAYGKCGQGRDAVAVFAEMRN 383

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           +G+   +  F S+L+  S  G +  G      + + G       +  ++ +  R   ++ 
Sbjct: 384 SGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKIDE 443

Query: 543 AFQVFKEM 550
           A+   ++M
Sbjct: 444 AYGFIRQM 451



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 173/385 (44%), Gaps = 43/385 (11%)

Query: 303 KQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           K+LH   +    L  +  VG  L+ +YA C   G    +R +FD + D NV+ +  +I  
Sbjct: 38  KKLHGKVLNDQYLRWNPSVGIKLMRVYAAC---GEPGLARHIFDEITDKNVVFFNVMIRS 94

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           YV +    K+A+ ++  M      P+ +T+  VLKA        V  Q++   +K G  L
Sbjct: 95  YVNNHLY-KDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQIHGAVLKIGLDL 153

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  VGN LI+MY +   +++A++  + +  +++VS+N+MV  YA+N     A EL  E+E
Sbjct: 154 NLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGRFNDALELCREME 213

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              +  +  T ASLL   ++                                 +   NV 
Sbjct: 214 ALNLKPNDCTMASLLPAVTN---------------------------------TTSDNVL 240

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
              ++F ++  ++VISW  MI  +  +     A+ ++ +M A+G++P+ ++ ++VL A  
Sbjct: 241 YVKEMFLKLTKKSVISWNVMIAMYVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYG 300

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
               +S G +      +   ++  +     ++D+  + G L +A      M    DV+ W
Sbjct: 301 DLSALSLG-RRVHKFAERKKLLPNLLLENALIDMYAKCGCLRDARAVFNQMQFR-DVVSW 358

Query: 662 RTFLGACRVHGDTELGKHAAEMILE 686
            + + A   +G    G+ A  +  E
Sbjct: 359 TSIISA---YGKCGQGRDAVAVFAE 380



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 65/212 (30%), Positives = 110/212 (51%), Gaps = 9/212 (4%)

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDD-------CVGNSLISMYARSGRMEDARKAFESLF 450
           C  +LD      + T     G+ L+D        VG  L+ +YA  G    AR  F+ + 
Sbjct: 24  CNRILDQ--YPDINTLKKLHGKVLNDQYLRWNPSVGIKLMRVYAACGEPGLARHIFDEIT 81

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           +KN+V +N M+ +Y  N   + A  +   +   G     YT+  +L  +S   ++  G Q
Sbjct: 82  DKNVVFFNVMIRSYVNNHLYKDALLVYKTMYTQGFVPDMYTYPCVLKASSRSDSLWVGLQ 141

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IH  ++K G + N  + N LI+MY +C +++ A QV  E+  R+V+SW SM++ +A++G 
Sbjct: 142 IHGAVLKIGLDLNLYVGNGLIAMYGKCKSLKEAQQVLDEIPCRDVVSWNSMVSVYAQNGR 201

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSH 602
              ALE+  +M A  +KPN  T  ++L A ++
Sbjct: 202 FNDALELCREMEALNLKPNDCTMASLLPAVTN 233



 Score = 97.1 bits (240), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 102/207 (49%), Gaps = 4/207 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+   ++A+     M   G  PD+ +   +L +        LG+ VH    R KL PN
Sbjct: 264 YVNNSMPKEAVVLYSQMEANGVEPDVVSIVSVLPAYGDLSALSLGRRVHKFAERKKLLPN 323

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ N+LI +Y+KCG L +A  +F  M   RD+VSW+S+IS+Y   G+  DA+ +F EM 
Sbjct: 324 LLLENALIDMYAKCGCLRDARAVFNQM-QFRDVVSWTSIISAYGKCGQGRDAVAVFAEMR 382

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+   F +V+ ACS+   +  G   +  + +CG         C +  +   G +D
Sbjct: 383 NSGLNPDSIAFVSVLAACSHAGLLDDGRYYFNLMAECGITPKLEHFACVVDLLGRAGKID 442

Query: 233 LESAYKVFDKMT-EKNTVGWTLMITRC 258
              AY    +M  E +   W  +++ C
Sbjct: 443 --EAYGFIRQMPLEPDERVWGPLLSAC 467


>gi|225430696|ref|XP_002266026.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840 [Vitis vinifera]
          Length = 713

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 242/691 (35%), Positives = 404/691 (58%), Gaps = 13/691 (1%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
           N +L + +H  ++++ L  ++  L  L+    K G L  A ++F  M  K D +SW+++I
Sbjct: 34  NDNLSQNIH-FISQTDLPESNKQLKELV----KTGHLGNARRMFDKMSQK-DEISWTTLI 87

Query: 153 SSYVNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           S YVN     +A+ +F  M +E G   + +  S   +AC    +V  G +++G+ +K G 
Sbjct: 88  SGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGL 147

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
            +S V VG AL+DM+ K     E   +VF +M  +N V WT +IT   + G  ++A+  F
Sbjct: 148 VNS-VFVGSALLDMYTKNGKIFE-GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYF 205

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            +M  S    D +T +  + AC++      G+++H+ A++ G  +   V  +L  MY KC
Sbjct: 206 SEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC 265

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G ++    +F++M   +V+SWT IIT  VQ G +++ AV+ F  M +  V+PN +TF
Sbjct: 266 ---GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG-QEECAVQAFIRMRESDVSPNEYTF 321

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           A+V+  C NL      EQ++   +  G A    V NS+++MYA+ G++  +   F  +  
Sbjct: 322 AAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTR 381

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +++VS++T++  Y++  +  +AFELL  +   G   + +  AS+LS   ++  +  G+Q+
Sbjct: 382 RDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL 441

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA ++  G E    + +ALI+MY +C ++E A ++F   E+ +++SWT+MI G+A+HG++
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
              +++F K+   G++P+ +T+I VLSACSHAGL+  G+++F +M  ++ I    EHY C
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGC 561

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           M+DLL R+G L++A   I +MP   D +VW T L ACRVHGD E G+  AE IL+ +P  
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              HI L+N+YAS G W   A+IRK MK + +IKE G SWI+  + V  F  G+ SHP+ 
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQG 681

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
            +IY  LD LA + +    + +T F+ ++LE
Sbjct: 682 EDIYNMLDLLASRTELADCVQETGFLPYDLE 712



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 262/525 (49%), Gaps = 11/525 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++  + G   D    SL  K+C  + + + G+L+H    ++ L  +  + ++L+ +Y+K 
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G + E  ++F  M   R++VSW+++I+  V  G   +A+  F EM       + Y F+  
Sbjct: 165 GKIFEGRRVFHEM-PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++AC+++  +  G  I+   +K G FD    V   L  M+ K    LE    +F+KM+ +
Sbjct: 224 LKACADSGALNYGREIHAQAMKKG-FDVSSFVANTLATMYNKCG-KLEYGLTLFEKMSMR 281

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V WT +IT   Q+G    A++ F+ M  S   P+ +T + V+S C+ L     G+QLH
Sbjct: 282 DVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLH 341

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           +  +  GLA  + V  S++ MYAKC   G +  S  +F  M   +++SW+ II GY Q G
Sbjct: 342 ALILHLGLAASLSVENSIMTMYAKC---GQLTSSSVIFHEMTRRDIVSWSTIIAGYSQ-G 397

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           G   EA +L S M      P  F  ASVL ACGN+      +Q++ + +  G      V 
Sbjct: 398 GHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVL 457

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           ++LI+MY + G +E+A + F++    ++VS+  M++ YA++  S +  +L  +I   G+ 
Sbjct: 458 SALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517

Query: 487 TSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             + TF  +LS  S  G +  G    +A   K     +   Y  +I +  R   +  A  
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577

Query: 546 VFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + + M   R+ + W++++     HG   R      ++L   ++PN
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQ--LEPN 620



 Score =  122 bits (306), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 163/355 (45%), Gaps = 27/355 (7%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ + A+     M +    P+  T++ ++  C        G+ +H+L+    L  +  + 
Sbjct: 297 GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVE 356

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NS++++Y+KCG L  ++ IF  M  +RDIVSWS++I+ Y   G   +A  +   M   G 
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEM-TRRDIVSWSTIIAGYSQGGHVSEAFELLSWMRMEGP 415

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            P E+  ++V+ AC N   +  G  ++ ++L  G  +    V  ALI+M+ K GS+  E 
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYVLSIG-LEHTAMVLSALINMYCKCGSI--EE 472

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++FD     + V WT MI    + G  R+ I LF  +   G  PD  T  GV+SACS 
Sbjct: 473 ASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSH 532

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRMLDH 350
             L   G        R   A+      S    +  C +D     G + D+  + + M  H
Sbjct: 533 AGLVDLG-------FRYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFH 585

Query: 351 -NVMSWTAI-----ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            + + W+ +     + G V+ G R  E +      ++   A  H T A++  + G
Sbjct: 586 RDDVVWSTLLRACRVHGDVERGRRTAERIL----QLEPNCAGTHITLANIYASKG 636


>gi|449494221|ref|XP_004159483.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  448 bits (1152), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 214/573 (37%), Positives = 359/573 (62%), Gaps = 4/573 (0%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++  C++ +L   GK  H+  +  GL  D+     L++MY+KC   GSVD +R+VFD M 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKC---GSVDFARQVFDEMP 126

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +++SW  +I G +   G + EA+ L   M +     + FT +SVL AC      +  +
Sbjct: 127 SRSLVSWNTMI-GSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQ 185

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            ++  A+K    L+  V  +L+ +YA+ G M+DA   FES+ ++++V++++M   Y +N 
Sbjct: 186 LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A  L  +  +TG+    +  +S++   + + A+ +G+Q++A + KSGF SN  + +
Sbjct: 246 MYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVAS 305

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           +LI MY++C  +E +++VF+++E RNV+ W +MI+G ++H  +   + +F KM   G+ P
Sbjct: 306 SLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSP 365

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N +T+++VLSAC H GL+ +G K+F  M  EH +   + HY+CMVD L R+G + EA + 
Sbjct: 366 NDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDL 425

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I  +P +A   +W + L +CR HG+ EL + AA+ + + +P +   ++LLSN+YA+ G W
Sbjct: 426 ISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKW 485

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           + VA +RK +KE ++ KE G SWIE  +KVH F VGE +HPK +EIY++L+++  ++++ 
Sbjct: 486 DEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKL 545

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY  +T   LH++ E  K + L  HSEK+A   GL+    + PIR+ KNLR+CGDCH+ +
Sbjct: 546 GYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFM 605

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K  S    R++++RD+NRFHH K+G CSC D+W
Sbjct: 606 KLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 213/426 (50%), Gaps = 40/426 (9%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +LK C + +    GK  H+ +    L+ + +  N LI++YSKCG ++ A ++F  M + R
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-R 128

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW++MI S    G++ +A+ + ++M   G   +E+  S+V+ AC+    ++   +++
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
            F +K    D +V V  AL+D++ K  + ++ A  VF+ M +++ V W+ M     Q   
Sbjct: 189 AFAIKAA-MDLNVFVATALLDVYAKCGL-MKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
              A+ LF     +G   D+F +S V+ AC+ L     GKQ+++   ++G   ++ V  S
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIFVASS 306

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMYAKC   G +++S KVF  +   NV+ W A+I+G +    R  E + LF  M Q  
Sbjct: 307 LIDMYAKC---GGIEESYKVFRDVEKRNVVLWNAMISG-LSRHARSLEVMILFEKMQQMG 362

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           ++PN  TF SVL ACG++             VK+G+   D +                  
Sbjct: 363 LSPNDVTFVSVLSACGHM-----------GLVKKGQKYFDLMTK---------------- 395

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
              E     N+  Y+ MVD  ++     +A++L+ ++       SA  + SLL+   + G
Sbjct: 396 ---EHHLAPNVFHYSCMVDTLSRAGQIFEAYDLISKLP---FNASASMWGSLLASCRTHG 449

Query: 504 AIGKGE 509
            +   E
Sbjct: 450 NLELAE 455



 Score =  162 bits (409), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 209/407 (51%), Gaps = 12/407 (2%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           +++ C+  + +  G   +  +L  G   +D+     LI+M+ K GSVD   A +VFD+M 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMG-LKTDLLTSNILINMYSKCGSVDF--ARQVFDEMP 126

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++ V W  MI   TQ G   +A+ L L M   G     FT+S V+ AC+     +  + 
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH++AI+  + L+V V  +L+D+YAKC   G + D+  VF+ M D +V++W+++  GYVQ
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKC---GLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +   + +A+ LF    +  +  + F  +SV+ AC  L      +QV     K G   +  
Sbjct: 244 NEMYE-QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSGFCSNIF 302

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V +SLI MYA+ G +E++ K F  + ++N+V +N M+   +++  S +   L  +++  G
Sbjct: 303 VASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG 362

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAA 543
           +  +  TF S+LS    +G + KG++    + K      N   Y+ ++   SR   +  A
Sbjct: 363 LSPNDVTFVSVLSACGHMGLVKKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422

Query: 544 FQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + +  ++  + +   W S++     HG    A E+  K L D I+P+
Sbjct: 423 YDLISKLPFNASASMWGSLLASCRTHGNLELA-EVAAKKLFD-IEPH 467



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 4/270 (1%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P+ S    N +I  L  +G   +A+  L  M ++G      T S +L +C      
Sbjct: 122 FDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCAL 181

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
              +L+H+   ++ ++ N  +  +L+ +Y+KCG + +A  +F+SM + R +V+WSSM + 
Sbjct: 182 SECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD-RSVVTWSSMAAG 240

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YV       A+ +F +  E G   +++  S+VI AC+    +  G  +   L K G F S
Sbjct: 241 YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQVNALLSKSG-FCS 299

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           ++ V  +LIDM+ K    +E +YKVF  + ++N V W  MI+  ++     + + LF  M
Sbjct: 300 NIFVASSLIDMYAKCG-GIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKM 358

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
              G  P+  T   V+SAC  + L   G++
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVKKGQK 388


>gi|225431281|ref|XP_002268784.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Vitis vinifera]
          Length = 647

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 241/612 (39%), Positives = 356/612 (58%), Gaps = 42/612 (6%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD-SRKVF 344
           L  V+  C+ +      KQ+H+   R GL     V   L+    K  +D  +D   R VF
Sbjct: 42  LVSVLHGCTHINQV---KQVHAHIFRKGLEQCCFVLAKLLRTLTK--LDVPMDPYPRLVF 96

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
            ++   N   WTA+I GY   G    E+V L++ M +  + P  FTF ++LKAC   LD 
Sbjct: 97  QQVEYPNPFLWTALIRGYALQGPF-MESVLLYNSMRRQGIGPVSFTFTALLKACSAALDV 155

Query: 405 NVAEQVYTHAVKRGRALDDC-VGNSLISMY------------------------------ 433
           N+  QV+T  +  G    D  VGN+LI MY                              
Sbjct: 156 NLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVA 215

Query: 434 -ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
            A+ G ME A + F+ L  K++V++  MV  YA+N    +A E+   ++  GV T   T 
Sbjct: 216 YAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTL 275

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGF--ESNHCIYNALISMYSRCANVEAAFQVFKEM 550
             ++S  + +GA      +     +SGF   SN  + +ALI MY++C +VE A++VF+ M
Sbjct: 276 VGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKVFERM 335

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           E+RNV S++SMI GFA HG A  A+E+F +ML   IKPN +T+I VL+ACSHAG++ +G 
Sbjct: 336 EERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQ 395

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
           + F  M + HG+    +HYACMVDLLGR+G L EAL  ++ MP++    VW   LGACR+
Sbjct: 396 QLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLGACRI 455

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           HG+ ++ + AA  + E +P     +ILLSN+YASAG W+ V+ +RK M+ + L K  GCS
Sbjct: 456 HGNPDMAQIAASHLFELEPNGIGNYILLSNIYASAGRWDDVSKVRKLMRAKGLKKNPGCS 515

Query: 731 WIEADNK-VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQY 789
           W+E     +H+F  G+ SHPK+ EI   L+ L  ++K  GY P+ + V +++ +E+K + 
Sbjct: 516 WVEGKKGIIHEFFAGDMSHPKSREIKQALEDLLDRLKYLGYQPNLSSVAYDISDEEKKRL 575

Query: 790 LFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHH 849
           L  HSEK+A+AFGL++T+    IR+ KNLR+C DCH+ +   S +TGREIV+RD+ RFHH
Sbjct: 576 LMSHSEKLALAFGLLTTNAGCTIRIVKNLRICEDCHSVMCGASQITGREIVVRDNMRFHH 635

Query: 850 IKDGKCSCNDYW 861
            +DG+CSC ++W
Sbjct: 636 FRDGRCSCGNFW 647



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/386 (27%), Positives = 191/386 (49%), Gaps = 52/386 (13%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCG-DLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           K VH+ + R  LE    +L  L+   +K    ++   ++        +   W+++I  Y 
Sbjct: 56  KQVHAHIFRKGLEQCCFVLAKLLRTLTKLDVPMDPYPRLVFQQVEYPNPFLWTALIRGYA 115

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
            +G  ++++ ++  M   G  P  + F+A+++ACS   +V +G  ++   +  G F SD+
Sbjct: 116 LQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDL 175

Query: 217 CVGCALIDMFVKGSV------------------------------DLESAYKVFDKMTEK 246
            VG  LIDM+VK                                 ++E+A ++FD +  K
Sbjct: 176 YVGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMK 235

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V WT M+T   Q   PR+A+ +F  M  +G   D  TL GV+SAC++L        + 
Sbjct: 236 DMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVR 295

Query: 307 SWAIRTGLAL--DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
             A ++G     +V VG +L+DMYAKC   GSV+D+ KVF+RM + NV S++++I G+  
Sbjct: 296 DVAEQSGFGPTSNVVVGSALIDMYAKC---GSVEDAYKVFERMEERNVYSYSSMIVGFAM 352

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
             G    A++LF +M++ ++ PN  TF  VL AC +       +Q++         +++C
Sbjct: 353 H-GLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFA-------MMEEC 404

Query: 425 VGNS--------LISMYARSGRMEDA 442
            G +        ++ +  R+GR+E+A
Sbjct: 405 HGVAPSEDHYACMVDLLGRAGRLEEA 430



 Score =  144 bits (363), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 183/395 (46%), Gaps = 40/395 (10%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VF ++   N   WT +I      G   +++ L+  M   G  P  FT + ++ ACS    
Sbjct: 95  VFQQVEYPNPFLWTALIRGYALQGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALD 154

Query: 299 FTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              G+Q+H+  I  G    D+ VG +L+DMY KC   G +    +VFD MLD +V+SWT+
Sbjct: 155 VNLGRQVHTQTILIGGFGSDLYVGNTLIDMYVKC---GCLGCGHRVFDEMLDRDVISWTS 211

Query: 358 IITGYVQSG------------------------------GRDKEAVKLFSDMIQGQVAPN 387
           +I  Y + G                               R +EA+++F  M    V  +
Sbjct: 212 LIVAYAKVGNMEAASELFDGLPMKDMVAWTAMVTGYAQNARPREALEVFERMQAAGVKTD 271

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRG--RALDDCVGNSLISMYARSGRMEDARKA 445
             T   V+ AC  L  +  A  V   A + G     +  VG++LI MYA+ G +EDA K 
Sbjct: 272 EVTLVGVISACAQLGAAKYANWVRDVAEQSGFGPTSNVVVGSALIDMYAKCGSVEDAYKV 331

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           FE + E+N+ SY++M+  +A +  +  A EL  E+  T +  +  TF  +L+  S  G +
Sbjct: 332 FERMEERNVYSYSSMIVGFAMHGLAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMV 391

Query: 506 GKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
            +G+Q+ A + +  G   +   Y  ++ +  R   +E A  + K M  + +   W +++ 
Sbjct: 392 EQGQQLFAMMEECHGVAPSEDHYACMVDLLGRAGRLEEALNLVKMMPMNPHGGVWGALLG 451

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
               HG    A +I    L + ++PNGI    +LS
Sbjct: 452 ACRIHGNPDMA-QIAASHLFE-LEPNGIGNYILLS 484



 Score =  119 bits (299), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 105/434 (24%), Positives = 192/434 (44%), Gaps = 77/434 (17%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS-LLTRSKLEPNSV 114
            G   +++   + M ++G  P   T++ LLK+C  + + +LG+ VH+  +       +  
Sbjct: 117 QGPFMESVLLYNSMRRQGIGPVSFTFTALLKACSAALDVNLGRQVHTQTILIGGFGSDLY 176

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNK------------------------------RD 144
           + N+LI +Y KCG L   +++F  M ++                              +D
Sbjct: 177 VGNTLIDMYVKCGCLGCGHRVFDEMLDRDVISWTSLIVAYAKVGNMEAASELFDGLPMKD 236

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
           +V+W++M++ Y    +  +A+ +F  M   G   +E     VI AC+        + +  
Sbjct: 237 MVAWTAMVTGYAQNARPREALEVFERMQAAGVKTDEVTLVGVISACAQLGAAKYANWVRD 296

Query: 205 FLLKCGYF-DSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
              + G+   S+V VG ALIDM+ K GSV  E AYKVF++M E+N   ++ MI      G
Sbjct: 297 VAEQSGFGPTSNVVVGSALIDMYAKCGSV--EDAYKVFERMEERNVYSYSSMIVGFAMHG 354

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
               A+ LF +M+ +   P+R T  GV++ACS   +   G+QL +        ++ C G 
Sbjct: 355 LAGAAMELFDEMLKTEIKPNRVTFIGVLTACSHAGMVEQGQQLFA-------MMEECHGV 407

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +  + +  C VD                            +   GR +EA+ L   M   
Sbjct: 408 APSEDHYACMVD---------------------------LLGRAGRLEEALNLVKMM--- 437

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI--SMYARSGRME 440
            + P+   + ++L AC    + ++A+   +H  +      + +GN ++  ++YA +GR +
Sbjct: 438 PMNPHGGVWGALLGACRIHGNPDMAQIAASHLFELE---PNGIGNYILLSNIYASAGRWD 494

Query: 441 DARKAFESLFEKNL 454
           D  K  + +  K L
Sbjct: 495 DVSKVRKLMRAKGL 508


>gi|414586383|tpg|DAA36954.1| TPA: hypothetical protein ZEAMMB73_991125 [Zea mays]
          Length = 1021

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 249/709 (35%), Positives = 411/709 (57%), Gaps = 12/709 (1%)

Query: 69   MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
            M ++G  P   T++ +L +      F  G+ +H+   +  L+ N  + +SLI+LY K G 
Sbjct: 315  MKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGC 374

Query: 129  LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
            +++A K+F     +++IV W++++  +V    Q + I MF  M       +++ F +V+ 
Sbjct: 375  ISDAKKVF-DFSTEKNIVMWNAILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLG 433

Query: 189  ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
            AC N  ++ +G  ++   +K G  D+D+ V  A++DM+ K G++D+  A  +F  +  K+
Sbjct: 434  ACINLYSLDLGRQVHCITIKNG-MDADLFVANAMLDMYSKLGAIDVAKA--LFSLIPVKD 490

Query: 248  TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            +V W  +I          +AI +   M   G   D  + +  ++ACS +    +GKQ+HS
Sbjct: 491  SVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSFATAINACSNIWAIETGKQIHS 550

Query: 308  WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
             +I+  +  +  VG SL+D+Y+K    G V+ SRKV   +   +++   A+ITG VQ+  
Sbjct: 551  ASIKYNVCSNHAVGSSLIDLYSKF---GDVESSRKVLAHVDASSIVPINALITGLVQNN- 606

Query: 368  RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG-RALDDCVG 426
            R+ EA++LF  +++    P++FTF S+L  C   + S + +QV+ + +K      D  +G
Sbjct: 607  REDEAIELFQQVLKDGFKPSNFTFTSILSGCTRPVSSVIGKQVHCYTLKSAILNQDTSLG 666

Query: 427  NSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
             SL+ +Y +   +EDA K  E + + KNLV +   +  YA+N  S ++  +   +    V
Sbjct: 667  ISLVGIYLKCKLLEDANKLLEEVPDHKNLVEWTATISGYAQNGYSVQSLVMFWRMRSYDV 726

Query: 486  GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             +   TF S+L   S + A+  G++IH  I+KSGF S     +AL+ MYS+C +V ++F+
Sbjct: 727  RSDEATFTSVLKACSEMAALTDGKEIHGLIVKSGFVSYETATSALMDMYSKCGDVISSFE 786

Query: 546  VFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            +FKE+++R N++ W SMI GFAK+G+A  AL +F KM    IKP+ +T + VL ACSHAG
Sbjct: 787  IFKELKNRQNIMPWNSMIVGFAKNGYANEALLLFQKMQESQIKPDDVTLLGVLIACSHAG 846

Query: 605  LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            LISEG   F SM   +GIV R++HYAC++DLLGR G L +A E I  +P  AD ++W T+
Sbjct: 847  LISEGLHFFDSMSQVYGIVPRVDHYACLIDLLGRGGHLQKAQEVIDQLPFRADGVIWATY 906

Query: 665  LGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
            L AC++H D E GK AA+ ++E +PQ  + ++ LS+L+A+AG+W      R+ M+E+ ++
Sbjct: 907  LAACQMHKDEERGKVAAKKLVEMEPQSSSTYVFLSSLHAAAGNWVEAKVAREAMREKGVM 966

Query: 725  KEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
            K  GCSWI   NK   F V +T HP  L IY  LD L   + + G + +
Sbjct: 967  KFPGCSWITVGNKQSVFVVQDTHHPDALSIYKMLDDLTGMMNKDGRIKE 1015



 Score =  253 bits (646), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 147/529 (27%), Positives = 273/529 (51%), Gaps = 42/529 (7%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G+ PD    +++L +C R      G+ VH  + +S    +      L+ +Y+KCG++++A
Sbjct: 152 GSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFCQAGLVDMYAKCGEVDDA 211

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F  +    D + W+SMI+ Y   G+   A+ +F  M ++G  P++            
Sbjct: 212 RRMFDGIACP-DTICWTSMIAGYHRVGRYQQALALFSRMEKMGSVPDQ------------ 258

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                                    V C  I   +     L  A  +  ++   +TV W 
Sbjct: 259 -------------------------VTCVTIISTLASMGRLGDARTLLKRIRMTSTVAWN 293

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I   +Q G   +   L+ DM   G +P R T + ++SA + +  F  G+Q+H+ A++ 
Sbjct: 294 AVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAANMTAFDEGRQIHATAVKH 353

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           GL  +V VG SL+++Y K    G + D++KVFD   + N++ W AI+ G+VQ+  ++ E 
Sbjct: 354 GLDANVFVGSSLINLYVK---HGCISDAKKVFDFSTEKNIVMWNAILYGFVQNELQE-ET 409

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +++F  M +  +  + FTF SVL AC NL   ++  QV+   +K G   D  V N+++ M
Sbjct: 410 IQMFQYMRRADLEADDFTFVSVLGACINLYSLDLGRQVHCITIKNGMDADLFVANAMLDM 469

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++ G ++ A+  F  +  K+ VS+N ++   A N    +A  +L  ++  G+     +F
Sbjct: 470 YSKLGAIDVAKALFSLIPVKDSVSWNALIVGLAHNEEEGEAINMLKRMKFYGIALDEVSF 529

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           A+ ++  S+I AI  G+QIH+  IK    SNH + ++LI +YS+  +VE++ +V   ++ 
Sbjct: 530 ATAINACSNIWAIETGKQIHSASIKYNVCSNHAVGSSLIDLYSKFGDVESSRKVLAHVDA 589

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            +++   ++ITG  ++     A+E+F ++L DG KP+  T+ ++LS C+
Sbjct: 590 SSIVPINALITGLVQNNREDEAIELFQQVLKDGFKPSNFTFTSILSGCT 638



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 203/405 (50%), Gaps = 42/405 (10%)

Query: 262 GCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
           G PRD +  F  +  S G  PD+F ++ V+SACS L     G+Q+H   +++G    V  
Sbjct: 135 GSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVHCDVLKSGFCSSVFC 194

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
              LVDMYAKC   G VDD+R++FD +   + + WT++I GY    GR ++A+ LFS M 
Sbjct: 195 QAGLVDMYAKC---GEVDDARRMFDGIACPDTICWTSMIAGY-HRVGRYQQALALFSRME 250

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +    P+  T                                 CV  ++IS  A  GR+ 
Sbjct: 251 KMGSVPDQVT---------------------------------CV--TIISTLASMGRLG 275

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           DAR   + +   + V++N ++ +Y+++    + F L  +++  G+  +  TFAS+LS A+
Sbjct: 276 DARTLLKRIRMTSTVAWNAVIASYSQSGLDSEVFGLYKDMKKQGLMPTRSTFASILSAAA 335

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++ A  +G QIHA  +K G ++N  + ++LI++Y +   +  A +VF    ++N++ W +
Sbjct: 336 NMTAFDEGRQIHATAVKHGLDANVFVGSSLINLYVKHGCISDAKKVFDFSTEKNIVMWNA 395

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           ++ GF ++      +++F  M    ++ +  T+++VL AC +   +  G +    +  ++
Sbjct: 396 ILYGFVQNELQEETIQMFQYMRRADLEADDFTFVSVLGACINLYSLDLG-RQVHCITIKN 454

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           G+   +     M+D+  + G++  A      +P+  D + W   +
Sbjct: 455 GMDADLFVANAMLDMYSKLGAIDVAKALFSLIPVK-DSVSWNALI 498



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 56/217 (25%), Positives = 108/217 (49%), Gaps = 12/217 (5%)

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE--SLFEKN 453
           +ACG L         +   ++ G  L   +G++L+ +Y RSGR+  A +A    +    +
Sbjct: 70  RACGVL---------HARILRLGLPLRGRLGDALVDLYGRSGRVGYAWRALACCTGAPAS 120

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIE-DTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
             + ++++  +A++ +     +    I    G     +  A +LS  S +GA+  G Q+H
Sbjct: 121 SAAASSVLSCHARSGSPRDVLDAFQRIRCSIGSTPDQFGIAVVLSACSRLGALEHGRQVH 180

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
             ++KSGF S+      L+ MY++C  V+ A ++F  +   + I WTSMI G+ + G   
Sbjct: 181 CDVLKSGFCSSVFCQAGLVDMYAKCGEVDDARRMFDGIACPDTICWTSMIAGYHRVGRYQ 240

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           +AL +F +M   G  P+ +T + ++S  +  G + + 
Sbjct: 241 QALALFSRMEKMGSVPDQVTCVTIISTLASMGRLGDA 277


>gi|20146226|dbj|BAB89008.1| PPR repeat protein-like [Oryza sativa Japonica Group]
 gi|125573391|gb|EAZ14906.1| hypothetical protein OsJ_04836 [Oryza sativa Japonica Group]
          Length = 785

 Score =  447 bits (1151), Expect = e-123,   Method: Compositional matrix adjust.
 Identities = 255/753 (33%), Positives = 419/753 (55%), Gaps = 22/753 (2%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L++ Y + G    A ++   M  +R+ VS++ +I +Y   G    ++         G 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEM-PRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGV 105

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             + + ++A + ACS   ++  G  ++   +  G   S V V  +L+ M+ K   ++  A
Sbjct: 106 DVDRFSYAAALAACSRAGHLRAGRAVHALAILDG-LSSGVFVSNSLVSMYSKCG-EMGEA 163

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VFD   E++ V W  +++   + G   + +R+F  M   G   + F L  V+  CS  
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 297 ELFTS--GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              T    + +H   I+ GL  DV +  +++DMYAK    G++ ++  +F  + + NV+ 
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAK---KGALVEAAALFRSVQEPNVVM 280

Query: 355 WTAIITGYVQSG---GRD--KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           +  +I G+ ++    G++   EA+ L+S++    + P  FTF+SVL+AC         +Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   +K     DD +G++LI +Y  SG MED  + F S  + ++V++  MV    +N  
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            EKA  L HE    G+    +T +S+++  +S+     GEQI     KSGF+    + N+
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            + MY+R  +V+AA + F+EME  +V+SW+++I+  A+HG A  AL  F +M+   + PN
Sbjct: 461 CVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPN 520

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            IT++ VL+ACSH GL+ EG +++ +M  ++G+   ++H  C+VDLLGR+G L +A  FI
Sbjct: 521 EITFLGVLTACSHGGLVDEGLRYYETMTKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFI 580

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            +    AD ++WR+ L +CR+H D E G+  A  I+E +P   A++++L N+Y  AG   
Sbjct: 581 SNSIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELS 640

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
             +  R  MK+R + KE G SWIE    VH F  G+ SHP++  IY +L+++  +I++  
Sbjct: 641 LASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLA 700

Query: 770 YLPDTNFVLHELEEEQKVQYLFQ-HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
              DT       E  ++ Q L   HSEK+AVA G+I   +S PIRV KNLRVC DCH+ +
Sbjct: 701 -TTDT-------EISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTM 752

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IS    REI+LRD  RFHH +DG CSC DYW
Sbjct: 753 KLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 146/498 (29%), Positives = 256/498 (51%), Gaps = 22/498 (4%)

Query: 35  PFIAQPTTSE-PLSNRLIYHL------NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           P  A+    E P  N + ++L       +G    ++ TL    + G   D  +Y+  L +
Sbjct: 59  PLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAA 118

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C R+ +   G+ VH+L     L     + NSL+S+YSKCG++ EA ++F  +  +RD VS
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF-DVAEERDDVS 177

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN--VAIGHIIYGF 205
           W+S++S YV  G + + + +F  M   G   N +   +VI+ CS   +  + I   ++G 
Sbjct: 178 WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGC 237

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR-C---TQL 261
           ++K G  DSDV +  A+IDM+ K    +E+A  +F  + E N V +  MI   C   T +
Sbjct: 238 VIKAG-LDSDVFLVSAMIDMYAKKGALVEAA-ALFRSVQEPNVVMFNTMIAGFCRTETVI 295

Query: 262 G--CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           G     +A+ L+ ++   G  P  FT S V+ AC+       GKQ+H   I+     D  
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF 355

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +G +L+D+Y      G ++D  + F     H++++WTA+++G VQ+   +K A+ LF + 
Sbjct: 356 IGSALIDLYFN---SGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK-ALSLFHES 411

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           +   + P+ FT +SV+ AC +L  +   EQ+   A K G      +GNS + MYARSG +
Sbjct: 412 LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + A + F+ +   ++VS++ ++  +A++  +  A     E+ D  V  +  TF  +L+  
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 500 SSIGAIGKGEQIHARIIK 517
           S  G + +G + +  + K
Sbjct: 532 SHGGLVDEGLRYYETMTK 549


>gi|15217508|ref|NP_172412.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806401|sp|Q56XI1.2|PPR25_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09410
 gi|3482916|gb|AAC33201.1| Hypothetical protein [Arabidopsis thaliana]
 gi|91805759|gb|ABE65608.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332190317|gb|AEE28438.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 705

 Score =  447 bits (1151), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 262/748 (35%), Positives = 417/748 (55%), Gaps = 66/748 (8%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N  I+  S+ G ++EA K+F S  +K  I SW+SM++ Y       DA  +F EM +   
Sbjct: 21  NVRITHLSRIGKIHEARKLFDSCDSK-SISSWNSMVAGYFANLMPRDARKLFDEMPD--- 76

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV-KGSVDLES 235
             N   ++ ++        +     ++  +      + +V    AL+  +V  G VD+  
Sbjct: 77  -RNIISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALVKGYVHNGKVDV-- 128

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +F KM EKN V WT+M+    Q G   DA +L+ +MI     PD+  ++        
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMI-----PDKDNIA-------- 174

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                          RT +   +C              +G VD++R++FD M + +V++W
Sbjct: 175 ---------------RTSMIHGLCK-------------EGRVDEAREIFDEMSERSVITW 206

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           T ++TGY Q+  R  +A K+F  M +        ++ S+L   G + +  + +      V
Sbjct: 207 TTMVTGYGQNN-RVDDARKIFDVMPE----KTEVSWTSML--MGYVQNGRIEDAEELFEV 259

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
              + +  C  N++IS   + G +  AR+ F+S+ E+N  S+ T++  + +N    +A +
Sbjct: 260 MPVKPVIAC--NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L   ++  GV  +  T  S+LS  +S+ ++  G+Q+HA++++  F+ +  + + L++MY 
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM-LADGIKPNGITYI 594
           +C  +  +  +F     +++I W S+I+G+A HG    AL++F +M L+   KPN +T++
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           A LSACS+AG++ EG K + SM    G+     HYACMVD+LGR+G   EA+E I SM +
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D  VW + LGACR H   ++ +  A+ ++E +P++   +ILLSN+YAS G W  VA +
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAEL 557

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGE-TSHPKTLEIYAELDQLALKIKEFGYLPD 773
           RK MK R + K  GCSW E +NKVH F  G   SHP+   I   LD+L   ++E GY PD
Sbjct: 558 RKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPD 617

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            ++ LH+++EE+KV  L  HSE++AVA+ L+  S+  PIRV KNLRVC DCHTAIK IS 
Sbjct: 618 CSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISK 677

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           V  REI+LRD+NRFHH ++G+CSC DYW
Sbjct: 678 VKEREIILRDANRFHHFRNGECSCKDYW 705



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 223/487 (45%), Gaps = 29/487 (5%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N L+S Y K G+++EA K+F  M  +R++VSW++++  YV+ GK   A  +F +M
Sbjct: 78  NIISWNGLVSGYMKNGEIDEARKVFDLMP-ERNVVSWTALVKGYVHNGKVDVAESLFWKM 136

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
            E     N+  ++ ++        +     +Y  +      D D     ++I    K G 
Sbjct: 137 PE----KNKVSWTVMLIGFLQDGRIDDACKLYEMIP-----DKDNIARTSMIHGLCKEGR 187

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           VD   A ++FD+M+E++ + WT M+T   Q     DA ++F        +P++  +S   
Sbjct: 188 VD--EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTS 239

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
                ++   +G+   +  +   + +   + C+   M +     G +  +R+VFD M + 
Sbjct: 240 MLMGYVQ---NGRIEDAEELFEVMPVKPVIACNA--MISGLGQKGEIAKARRVFDSMKER 294

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           N  SW  +I  + +  G + EA+ LF  M +  V P   T  S+L  C +L   +  +QV
Sbjct: 295 NDASWQTVIKIH-ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   V+    +D  V + L++MY + G +  ++  F+    K+++ +N+++  YA +   
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413

Query: 471 EKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYN 528
           E+A ++  E+  +G    +  TF + LS  S  G + +G +I+  +    G +     Y 
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473

Query: 529 ALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
            ++ M  R      A ++   M  + +   W S++     H     A E   K L +   
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA-EFCAKKLIEIEP 532

Query: 588 PNGITYI 594
            N  TYI
Sbjct: 533 ENSGTYI 539



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 4/208 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H  +G   +A+    LM ++G  P   T   +L  C    + H GK VH+ L R + + +
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD 365

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM- 171
             + + L+++Y KCG+L ++  IF    +K DI+ W+S+IS Y + G   +A+ +F EM 
Sbjct: 366 VYVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHGLGEEALKVFCEMP 424

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           L     PNE  F A + ACS    V  G  IY  +               ++DM  +   
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG- 483

Query: 232 DLESAYKVFDKMT-EKNTVGWTLMITRC 258
               A ++ D MT E +   W  ++  C
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGAC 511


>gi|302820798|ref|XP_002992065.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
 gi|300140187|gb|EFJ06914.1| hypothetical protein SELMODRAFT_134581 [Selaginella moellendorffii]
          Length = 771

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 273/786 (34%), Positives = 447/786 (56%), Gaps = 37/786 (4%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           +++C   R  H  K++H  + RS    N  + N LI L+ KCGD + A  +F  +    +
Sbjct: 14  IRACAIGRKLHEAKILHDEIARSPHGDNRRLTNLLIDLFGKCGDPDAARAVFNRVRLPNE 73

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
             SWS +I +YV+  +  DA  +F  M   GF  + + ++ +I A +    +     ++ 
Sbjct: 74  -YSWSCIIQAYVSSSRIHDARALFDSMP--GF--DAFTWNIMIAAYARINRLDDARELFH 128

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
            ++       DV     L+  + +    LE A  +F +M   +TV  T ++      G  
Sbjct: 129 GMIS----GRDVVSWAILVAGYARHD-RLEEASALFRRMPLWDTVTCTSVLQGYAHNGHL 183

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH---SWAIRTGLALDVCVG 321
            +A  LF D I  G   DR       +AC+ + +   GK      +  +   + L     
Sbjct: 184 AEAQELF-DRI--GGAGDRDA-----TACNAM-IAAYGKNARVDLAEGLFAQIKLRNAAS 234

Query: 322 CSLVDM-YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
            SL+ + YA+   +G +D ++K FDRM   + +++TA+ T  +   G  + A     +M+
Sbjct: 235 WSLLLLTYAQ---NGHLDLAKKSFDRMPQRDSIAFTAM-TAVLSDQGELRGA----REML 286

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +   A +   + ++L+      D +   ++++ A++        V  +L+++Y + GR++
Sbjct: 287 RYLSAVDVIAWNALLEGYSRTGDLDEVRRLFS-AMEHRTVATTVVAGTLVNLYGKCGRVD 345

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           DAR+  +++  +  VS+  M+ AYA+N N+ +A  L   ++  G   S  T  S++   +
Sbjct: 346 DARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCA 405

Query: 501 SIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQVFKE--MEDRNVIS 557
            +G +  G++IHARI  S  F  +  + NA+I+MY +C N+E A +VF+   +  R+V++
Sbjct: 406 VLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVT 465

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           WT+MI  +A++G    A+E+F +M+ DG  +PN +T+++VLSACSH G + + W+HF SM
Sbjct: 466 WTAMIRAYAQNGVGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSHLGQLEQAWEHFCSM 525

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGDTE 675
             + G+    +HY C+VDLLGR+G L EA + + R     ADV+ W  FL AC+++GD E
Sbjct: 526 GPDFGVPPAGDHYCCLVDLLGRAGRLGEAEKLLLRHKDFEADVVCWIAFLSACQMNGDLE 585

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
             + AA+ + E +P++ A  +LLSN+YA+ G    VA IR  MK   + K AG SWIE +
Sbjct: 586 RSQRAAKRVSELEPENVAGRVLLSNVYAAKGRRADVARIRNEMKSSGVKKFAGRSWIEIN 645

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           N+VH+F V + SHP+ LEIY+EL++L  +IKE GY+PDT  VL +++EE+K Q L  HSE
Sbjct: 646 NRVHEFMVSDVSHPRKLEIYSELERLHREIKEAGYVPDTKMVLRDVDEEKKAQLLGYHSE 705

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           ++A+A G+IST     +RV KNLRVC DCH A K+IS + GR+I++RD++RFHH KDG C
Sbjct: 706 RLAMALGIISTPPGTTLRVVKNLRVCSDCHAATKFISQIVGRQIIVRDTSRFHHFKDGVC 765

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 766 SCGDYW 771



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 237/514 (46%), Gaps = 45/514 (8%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           F   IRAC+    +    I++  + +  + D+       LID+F K   D ++A  VF++
Sbjct: 10  FEERIRACAIGRKLHEAKILHDEIARSPHGDNRRLTNL-LIDLFGKCG-DPDAARAVFNR 67

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL------ 296
           +   N   W+ +I          DA  LF  M   GF  D FT + +++A + +      
Sbjct: 68  VRLPNEYSWSCIIQAYVSSSRIHDARALFDSM--PGF--DAFTWNIMIAAYARINRLDDA 123

Query: 297 -ELF---TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            ELF    SG+ + SWAI             LV  YA+      ++++  +F RM   + 
Sbjct: 124 RELFHGMISGRDVVSWAI-------------LVAGYAR---HDRLEEASALFRRMPLWDT 167

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++ T+++ GY  + G   EA +LF D I G    +     +++ A G     ++AE ++ 
Sbjct: 168 VTCTSVLQGYAHN-GHLAEAQELF-DRIGGAGDRDATACNAMIAAYGKNARVDLAEGLFA 225

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
               R  A      + L+  YA++G ++ A+K+F+ + +++ +++  M    +       
Sbjct: 226 QIKLRNAA----SWSLLLLTYAQNGHLDLAKKSFDRMPQRDSIAFTAMTAVLSDQGELRG 281

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A E+L  +    V      + +LL G S  G + +  ++ + +      +   +   L++
Sbjct: 282 AREMLRYLSAVDV----IAWNALLEGYSRTGDLDEVRRLFSAMEHRTVATT-VVAGTLVN 336

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           +Y +C  V+ A +V   M  R  +SWT+MI  +A++G AA A+ +F  M  +G +P+ IT
Sbjct: 337 LYGKCGRVDDARRVLDAMPVRTSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDIT 396

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            I+V+ +C+  G +S G +    +       Q +     ++ + G+ G+L  A E   S+
Sbjct: 397 LISVVDSCAVLGTLSLGKRIHARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESV 456

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           PL    +V  T+    R +    +G+ A E+  E
Sbjct: 457 PLRTRSVV--TWTAMIRAYAQNGVGEEAIELFQE 488



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/154 (31%), Positives = 83/154 (53%), Gaps = 3/154 (1%)

Query: 42  TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH 101
           TS   +  +  +  +G   +AI     M  +G  P   T   ++ SC       LGK +H
Sbjct: 358 TSVSWTAMIAAYAQNGNAAEAINLFQCMDLEGAEPSDITLISVVDSCAVLGTLSLGKRIH 417

Query: 102 SLLTRSKLEPNSV-ILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRG 159
           + +  S L   S+ +LN++I++Y KCG+L  A ++F+S+    R +V+W++MI +Y   G
Sbjct: 418 ARIRSSPLFSQSLMLLNAVITMYGKCGNLELAREVFESVPLRTRSVVTWTAMIRAYAQNG 477

Query: 160 KQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSN 192
              +AI +F EM ++ G  PN   F +V+ ACS+
Sbjct: 478 VGEEAIELFQEMVIDGGTEPNRVTFLSVLSACSH 511


>gi|225424252|ref|XP_002280792.1| PREDICTED: pentatricopeptide repeat-containing protein At2g01510,
           mitochondrial [Vitis vinifera]
 gi|297737690|emb|CBI26891.3| unnamed protein product [Vitis vinifera]
          Length = 610

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 219/529 (41%), Positives = 330/529 (62%), Gaps = 3/529 (0%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G +  +R++FD M       W  I+ GYV++G  DK AV ++  M    V P+ FTF  V
Sbjct: 83  GDMSYARQLFDEMHKPRPFLWNTIMKGYVKNGIPDK-AVSVYGKMRHLGVRPDPFTFPFV 141

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           +KAC  L +      ++ H VK G      V   L+ MY + G +  A   F S+ E++L
Sbjct: 142 IKACAELAELWAGLGMHGHVVKHGLEFVAAVRTELMIMYVKFGELGCAEFLFGSMVERDL 201

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           V++N ++    +   S KA +   E+   G+   + T  S LS    +G +  GE+I+  
Sbjct: 202 VAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEF 261

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
             + G +SN  ++NA + M ++C +++ A  +F EM  RNVISW+++I G+A +G + +A
Sbjct: 262 AREEGIDSNIIVHNARLDMCAKCGDMDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKA 321

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY--DEHGIVQRMEHYACM 632
           L +F +M   G++PN +T++AVLSACSH G ++EGW++F  M   D+  I  R EHYACM
Sbjct: 322 LALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQSDDKNIQPRKEHYACM 381

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           VDLLGRSG L EA  FI+ MP+ AD  +W   LGAC +H + +LG+H A+++ E  P+  
Sbjct: 382 VDLLGRSGHLEEAYNFIKIMPIEADPGIWGALLGACAIHQNIKLGQHVADLLFELAPEIA 441

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
           + H+LLSN+YA+AG W  V  +R+RMK++   K A  S +E + ++H  + G+ SHP++ 
Sbjct: 442 SYHVLLSNMYAAAGRWHCVEKVRQRMKKKGARKVAAYSSVEFNGEIHILYGGDKSHPQSA 501

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
            I A+L+ L  ++K  GY+P+T+ V H++E+E+K   L  HSEK+A+AF LI+ S   PI
Sbjct: 502 SILAKLEDLLKQMKSMGYIPETDSVFHDVEDEEKESTLSTHSEKLAIAFSLINGSPKFPI 561

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RV KNLR+CGDCHT  K +S +T REI++RD NRFHH K+G CSC D+W
Sbjct: 562 RVMKNLRICGDCHTFCKLVSRITMREIIMRDKNRFHHFKNGICSCKDFW 610



 Score =  150 bits (380), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 165/327 (50%), Gaps = 26/327 (7%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           GD++ A ++F  M   R  + W++++  YV  G    A+ ++ +M  LG  P+ + F  V
Sbjct: 83  GDMSYARQLFDEMHKPRPFL-WNTIMKGYVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFV 141

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           I+AC+    +  G  ++G ++K G  +    V   L+ M+VK   +L  A  +F  M E+
Sbjct: 142 IKACAELAELWAGLGMHGHVVKHG-LEFVAAVRTELMIMYVKFG-ELGCAEFLFGSMVER 199

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V W  +I  C Q G    A++ F +M ++G  PD  T+   +SAC  L    +G++++
Sbjct: 200 DLVAWNALIAVCVQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIY 259

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            +A   G+  ++ V  + +DM AKC   G +D +  +FD M   NV+SW+ +I GY  +G
Sbjct: 260 EFAREEGIDSNIIVHNARLDMCAKC---GDMDKAMNLFDEMPQRNVISWSTVIGGYAVNG 316

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--- 423
             +K A+ LFS M    V PN+ TF +VL AC +    N   Q +    +     DD   
Sbjct: 317 ESEK-ALALFSRMKNQGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFMAQS----DDKNI 371

Query: 424 --------CVGNSLISMYARSGRMEDA 442
                   C    ++ +  RSG +E+A
Sbjct: 372 QPRKEHYAC----MVDLLGRSGHLEEA 394



 Score =  105 bits (261), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 73/252 (28%), Positives = 119/252 (47%), Gaps = 3/252 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G   KA+     M   G  PD  T+  ++K+C        G  +H  + +  LE  
Sbjct: 110 YVKNGIPDKAVSVYGKMRHLGVRPDPFTFPFVIKACAELAELWAGLGMHGHVVKHGLEFV 169

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + +   L+ +Y K G+L  A  +F SM  +RD+V+W+++I+  V  G    A+  F EM 
Sbjct: 170 AAVRTELMIMYVKFGELGCAEFLFGSM-VERDLVAWNALIAVCVQTGFSSKALQSFREMG 228

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+     + + AC +   +  G  IY F  + G  DS++ V  A +DM  K   D
Sbjct: 229 MAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEG-IDSNIIVHNARLDMCAKCG-D 286

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A  +FD+M ++N + W+ +I      G    A+ LF  M   G  P+  T   V+SA
Sbjct: 287 MDKAMNLFDEMPQRNVISWSTVIGGYAVNGESEKALALFSRMKNQGVQPNYVTFLAVLSA 346

Query: 293 CSELELFTSGKQ 304
           CS       G Q
Sbjct: 347 CSHTGRVNEGWQ 358



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/153 (28%), Positives = 75/153 (49%), Gaps = 1/153 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +  G   KA+ +   M   G  PD  T    L +C        G+ ++       ++ N 
Sbjct: 212 VQTGFSSKALQSFREMGMAGIKPDSVTIVSALSACGHLGCLETGEEIYEFAREEGIDSNI 271

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           ++ N+ + + +KCGD+++A  +F  M  +R+++SWS++I  Y   G+   A+ +F  M  
Sbjct: 272 IVHNARLDMCAKCGDMDKAMNLFDEM-PQRNVISWSTVIGGYAVNGESEKALALFSRMKN 330

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
            G  PN   F AV+ ACS+T  V  G   + F+
Sbjct: 331 QGVQPNYVTFLAVLSACSHTGRVNEGWQYFNFM 363


>gi|297737063|emb|CBI26264.3| unnamed protein product [Vitis vinifera]
          Length = 583

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 235/578 (40%), Positives = 349/578 (60%), Gaps = 12/578 (2%)

Query: 287 SGVVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           S V + CS L     G+  H+  I+T    L   +   LV+MY+K     S   ++ +  
Sbjct: 15  SAVSTQCSRL-----GRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNS---AQLLLS 66

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
              + +V++WTA+I G VQ+G R   A+  FS+M +  + PN FTF    KA G+L    
Sbjct: 67  LTPNRSVVTWTALIAGSVQNG-RFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPL 125

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           V +QV+  AVK G+  D  VG S   MY+++G  E+ARK F+ + E+N+ ++N  +    
Sbjct: 126 VGKQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMPERNIATWNAYLSNSV 185

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
                + A     E    G+  + +  +S+LS  + +  +  G+ +H   +K+    N  
Sbjct: 186 LEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVVGNIF 245

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + +AL+ MY +C ++E A + F EM +RN+++W +MI G+A  G A  A+ +F +M    
Sbjct: 246 VGSALVDMYGKCGSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGS 305

Query: 586 --IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
             + PN +T++ VLSACS AG ++ G + F SM   +GI    EHYAC+VDLLGR+G + 
Sbjct: 306 HRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVVDLLGRAGMVE 365

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           +A +FI+ MP+   V VW   LGA ++ G +ELGK AA+ + E DP D   H+LLSN++A
Sbjct: 366 QAYQFIKKMPIRPTVSVWGALLGASKMFGKSELGKVAADNLFELDPLDSGNHVLLSNMFA 425

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
           +AG WE    +RK MK+  + K AGCSWI A N VH F   +TSH +  EI A L +L  
Sbjct: 426 AAGRWEEATLVRKEMKDVGIKKGAGCSWITAGNAVHVFQAKDTSHERNSEIQAMLAKLRG 485

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           +++  GY+PDT+F L +LEEE+K   ++ HSEKIA+AFGLIS     PIR+ KNLR+CGD
Sbjct: 486 EMEAAGYIPDTSFALFDLEEEEKAMEVWYHSEKIALAFGLISIPAGVPIRITKNLRICGD 545

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH+AIK+IS + GREI++RD+N FH  +D +CSC DYW
Sbjct: 546 CHSAIKFISGIVGREIIVRDNNLFHRFRDNQCSCRDYW 583



 Score =  197 bits (501), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 150/510 (29%), Positives = 240/510 (47%), Gaps = 57/510 (11%)

Query: 76  PDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEA 132
           P L   SL  L++S + ++   LG+  H+ + ++   P  S I N L+++YSK    N A
Sbjct: 2   PFLSPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSA 61

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++  S+   R +V+W+++I+  V  G+   A+  F  M      PN++ F    +A  +
Sbjct: 62  -QLLLSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGS 120

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
             +  +G  ++   +K G   SDV VGC+  DM+ K  +  E A K+FD+M E+N   W 
Sbjct: 121 LRSPLVGKQVHALAVKAGQI-SDVFVGCSAFDMYSKAGLT-EEARKMFDEMPERNIATWN 178

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
             ++     G   DA+  F++    G  P  F +S V+SAC+ L +   GK +H+ A++ 
Sbjct: 179 AYLSNSVLEGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKA 238

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            +  ++ VG +LVDMY KC   GS++D+ + FD M + N+++W A+I GY   G  D  A
Sbjct: 239 CVVGNIFVGSALVDMYGKC---GSIEDAERAFDEMPERNLVTWNAMIGGYAHQGQADM-A 294

Query: 373 VKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
           V LF +M  G  +VAPN+ TF  VL AC      NV  +++                   
Sbjct: 295 VTLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFE------------------ 336

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE--IEDTGVGTS 488
           SM  R G             E     Y  +VD   +    E+A++ + +  I  T     
Sbjct: 337 SMRGRYG------------IEPGAEHYACVVDLLGRAGMVEQAYQFIKKMPIRPTVSVWG 384

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
           A   AS + G S +G +          + SG   NH +   L +M++     E A  V K
Sbjct: 385 ALLGASKMFGKSELGKVAADNLFELDPLDSG---NHVL---LSNMFAAAGRWEEATLVRK 438

Query: 549 EMEDRNV-----ISWTSMITGFAKHGFAAR 573
           EM+D  +      SW +   G A H F A+
Sbjct: 439 EMKDVGIKKGAGCSWIT--AGNAVHVFQAK 466



 Score =  112 bits (281), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 169/364 (46%), Gaps = 35/364 (9%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR   A+F    M +    P+  T+    K+    R+  +GK VH+L  ++    + 
Sbjct: 84  VQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSPLVGKQVHALAVKAGQISDV 143

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  S   +YSK G   EA K+F  M  +R+I +W++ +S+ V  G+  DA+  F+E  +
Sbjct: 144 FVGCSAFDMYSKAGLTEEARKMFDEM-PERNIATWNAYLSNSVLEGRYDDALTAFIEARK 202

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
            G  P ++  S+V+ AC+    + +G  ++   +K      ++ VG AL+DM+ K GS+ 
Sbjct: 203 EGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAVKACVV-GNIFVGSALVDMYGKCGSI- 260

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVV 290
            E A + FD+M E+N V W  MI      G    A+ LF +M        P+  T   V+
Sbjct: 261 -EDAERAFDEMPERNLVTWNAMIGGYAHQGQADMAVTLFDEMTCGSHRVAPNYVTFVCVL 319

Query: 291 SACSE-------LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           SACS        +E+F S +    + I  G     CV    VD+  +    G V+ + + 
Sbjct: 320 SACSRAGSVNVGMEIFESMRG--RYGIEPGAEHYACV----VDLLGRA---GMVEQAYQF 370

Query: 344 FDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
             +M +   V  W A++            A K+F     G+VA ++      L +  ++L
Sbjct: 371 IKKMPIRPTVSVWGALLG-----------ASKMFGKSELGKVAADNLFELDPLDSGNHVL 419

Query: 403 DSNV 406
            SN+
Sbjct: 420 LSNM 423



 Score = 76.3 bits (186), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 104/220 (47%), Gaps = 9/220 (4%)

Query: 46  LSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT 105
           LSN ++    +GR   A+       ++G  P     S +L +C       +GK VH+L  
Sbjct: 181 LSNSVL----EGRYDDALTAFIEARKEGIEPTDFMVSSVLSACAGLSVLEVGKSVHTLAV 236

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           ++ +  N  + ++L+ +Y KCG + +A + F  M  +R++V+W++MI  Y ++G+   A+
Sbjct: 237 KACVVGNIFVGSALVDMYGKCGSIEDAERAFDEM-PERNLVTWNAMIGGYAHQGQADMAV 295

Query: 166 HMFVEML--ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
            +F EM        PN   F  V+ ACS   +V +G  I+  +      +        ++
Sbjct: 296 TLFDEMTCGSHRVAPNYVTFVCVLSACSRAGSVNVGMEIFESMRGRYGIEPGAEHYACVV 355

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRCTQLG 262
           D+  +  + +E AY+   KM  + TV  W  ++      G
Sbjct: 356 DLLGRAGM-VEQAYQFIKKMPIRPTVSVWGALLGASKMFG 394



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 83/188 (44%), Gaps = 7/188 (3%)

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
           S  + ASL+  A S      G   HA+IIK+        IYN L++MYS+     +A  +
Sbjct: 5   SPNSLASLVESAVSTQCSRLGRAAHAQIIKTLDNPLPSFIYNHLVNMYSKLDRPNSAQLL 64

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS--HAG 604
                +R+V++WT++I G  ++G    AL  F  M  D I+PN  T+     A     + 
Sbjct: 65  LSLTPNRSVVTWTALIAGSVQNGRFTSALFHFSNMRRDSIQPNDFTFPCAFKASGSLRSP 124

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
           L+    K   ++  + G +  +       D+  ++G   EA +    MP   ++  W  +
Sbjct: 125 LVG---KQVHALAVKAGQISDVFVGCSAFDMYSKAGLTEEARKMFDEMP-ERNIATWNAY 180

Query: 665 LGACRVHG 672
           L    + G
Sbjct: 181 LSNSVLEG 188


>gi|125529196|gb|EAY77310.1| hypothetical protein OsI_05285 [Oryza sativa Indica Group]
          Length = 785

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 255/753 (33%), Positives = 419/753 (55%), Gaps = 22/753 (2%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L++ Y + G    A ++   M  +R+ VS++ +I +Y   G    ++         G 
Sbjct: 47  NTLLAAYCRLGGPLPARRLLDEM-PRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGV 105

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             + + ++A + ACS   ++  G  ++   +  G   S V V  +L+ M+ K   ++  A
Sbjct: 106 DVDRFSYAAALAACSRAGHLRAGRAVHALAILDG-LSSGVFVSNSLVSMYSKCG-EMGEA 163

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VFD   E++ V W  +++   + G   + +R+F  M   G   + F L  V+  CS  
Sbjct: 164 RRVFDVAEERDDVSWNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGR 223

Query: 297 ELFTS--GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              T    + +H   I+ GL  DV +  +++DMYAK    G++ ++  +F  + + NV+ 
Sbjct: 224 GDGTMDIAEAVHGCVIKAGLDSDVFLVSAMIDMYAK---KGALVEAAALFRSVQEPNVVM 280

Query: 355 WTAIITGYVQSG---GRD--KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           +  +I G+ ++    G++   EA+ L+S++    + P  FTF+SVL+AC         +Q
Sbjct: 281 FNTMIAGFCRTETVIGKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQ 340

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++   +K     DD +G++LI +Y  SG MED  + F S  + ++V++  MV    +N  
Sbjct: 341 IHGQVIKYTFQEDDFIGSALIDLYFNSGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNEL 400

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            EKA  L HE    G+    +T +S+++  +S+     GEQI     KSGF+    + N+
Sbjct: 401 HEKALSLFHESLGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNS 460

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            + MY+R  +V+AA + F+EME  +V+SW+++I+  A+HG A  AL  F +M+   + PN
Sbjct: 461 CVHMYARSGDVDAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPN 520

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            IT++ VL+ACSH GL+ EG +++ +M  ++G+   ++H  C+VDLLGR+G L +A  FI
Sbjct: 521 EITFLGVLTACSHGGLVDEGLRYYETMNKDYGLSPTIKHCTCVVDLLGRAGRLADAEAFI 580

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            +    AD ++WR+ L +CR+H D E G+  A  I+E +P   A++++L N+Y  AG   
Sbjct: 581 SNGIFHADPVIWRSLLASCRIHRDLERGQLVANRIMELEPTSSASYVILYNMYLDAGELS 640

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
             +  R  MK+R + KE G SWIE    VH F  G+ SHP++  IY +L+++  +I++  
Sbjct: 641 LASKTRDLMKQRGVKKEPGLSWIELKCGVHSFVAGDKSHPESSAIYTKLEEMLSRIEKLA 700

Query: 770 YLPDTNFVLHELEEEQKVQYLFQ-HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
              DT       E  ++ Q L   HSEK+AVA G+I   +S PIRV KNLRVC DCH+ +
Sbjct: 701 -TTDT-------EISKREQNLMNCHSEKLAVALGMIHLPQSAPIRVMKNLRVCRDCHSTM 752

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IS    REI+LRD  RFHH +DG CSC DYW
Sbjct: 753 KLISKSENREIILRDPIRFHHFRDGSCSCADYW 785



 Score =  213 bits (543), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 145/489 (29%), Positives = 252/489 (51%), Gaps = 22/489 (4%)

Query: 35  PFIAQPTTSE-PLSNRLIYHL------NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           P  A+    E P  N + ++L       +G    ++ TL    + G   D  +Y+  L +
Sbjct: 59  PLPARRLLDEMPRRNAVSFNLLIDAYSREGLAPLSLETLARARRAGVDVDRFSYAAALAA 118

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVS 147
           C R+ +   G+ VH+L     L     + NSL+S+YSKCG++ EA ++F  +  +RD VS
Sbjct: 119 CSRAGHLRAGRAVHALAILDGLSSGVFVSNSLVSMYSKCGEMGEARRVF-DVAEERDDVS 177

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN--VAIGHIIYGF 205
           W+S++S YV  G + + + +F  M   G   N +   +VI+ CS   +  + I   ++G 
Sbjct: 178 WNSLVSGYVRAGAREEMVRVFAMMRRGGMGLNSFALGSVIKCCSGRGDGTMDIAEAVHGC 237

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR-C---TQL 261
           ++K G  DSDV +  A+IDM+ K    +E+A  +F  + E N V +  MI   C   T +
Sbjct: 238 VIKAG-LDSDVFLVSAMIDMYAKKGALVEAA-ALFRSVQEPNVVMFNTMIAGFCRTETVI 295

Query: 262 G--CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           G     +A+ L+ ++   G  P  FT S V+ AC+       GKQ+H   I+     D  
Sbjct: 296 GKEVASEALTLYSEVQSRGMQPTEFTFSSVLRACNLAGYLEFGKQIHGQVIKYTFQEDDF 355

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +G +L+D+Y      G ++D  + F     H++++WTA+++G VQ+   +K A+ LF + 
Sbjct: 356 IGSALIDLYFN---SGCMEDGFRCFRSSPKHDIVTWTAMVSGCVQNELHEK-ALSLFHES 411

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           +   + P+ FT +SV+ AC +L  +   EQ+   A K G      +GNS + MYARSG +
Sbjct: 412 LGAGLKPDLFTISSVMNACASLAVARAGEQIQCFATKSGFDRFTVMGNSCVHMYARSGDV 471

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + A + F+ +   ++VS++ ++  +A++  +  A     E+ D  V  +  TF  +L+  
Sbjct: 472 DAATRRFQEMESHDVVSWSAVISCHAQHGCARDALHFFDEMVDAKVVPNEITFLGVLTAC 531

Query: 500 SSIGAIGKG 508
           S  G + +G
Sbjct: 532 SHGGLVDEG 540


>gi|227463000|gb|ACP39952.1| pentatricopeptide repeat protein [Gossypium hirsutum]
 gi|227463002|gb|ACP39953.1| pentatricopeptide repeat protein [Gossypium hirsutum]
          Length = 592

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/567 (40%), Positives = 359/567 (63%), Gaps = 18/567 (3%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDM-YAKCTVDGSVDDSRKVF------DRMLDHNVMSW 355
           +Q+H+  I TGL     +   L+   YA  +    +  +R++F      D  L H++++ 
Sbjct: 36  QQIHARIIITGLGRTRSLITKLLSFAYAAAS---PISYTRRLFFSIPKPDTFLFHSLITL 92

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           T+  +         +E++  +  M+   ++ +++TF++V+K+  +L   ++ E ++ H  
Sbjct: 93  TSKFS-------FPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVY 145

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
             G  LD  V  +L+S YA+SG +  ARK F+ + EK +V++N+M+  Y +N   ++A E
Sbjct: 146 ICGYGLDAYVQAALVSFYAKSGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVE 205

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L   ++D GV   + TF SLLS  + +GAIG G  +H  I ++ F+ N  +  AL++MYS
Sbjct: 206 LFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYS 265

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           RC NV  A +VF  ME++N+++WT+MI+G+  HG  ++A+E+F +M  DG +PN +T++A
Sbjct: 266 RCGNVSKAREVFDSMEEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFDGPRPNNVTFVA 325

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM-PL 654
           VLSAC+HAGL+ EG + F +M  E+G+V  +EH  CMVD+LGR+G L EA +FI++  P 
Sbjct: 326 VLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQFIKNTSPK 385

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
                VW   LGAC++H + +LG   AE +L  +P++P  +++LSN+YA AG  + V  I
Sbjct: 386 EPAPAVWTAMLGACKMHKNFDLGVEVAEHLLSIEPENPGHYVMLSNIYALAGRMDRVEKI 445

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R  M    L KE G S I+ D+KV+ F +G+ SHPKT +IY  LD+L  + +E GY+P +
Sbjct: 446 RNIMIRNRLKKEVGYSTIDVDHKVYLFSMGDKSHPKTNQIYLYLDELMSRCREAGYIPAS 505

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
             V+HE+EEE++   L  HSEK+A+AFGL+ T     IR+ KNLR+C DCHTAIKYIS++
Sbjct: 506 ESVMHEVEEEEREYALRYHSEKLAIAFGLLKTGSGVAIRIVKNLRMCEDCHTAIKYISII 565

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             REI +RD  RFHH KDG CSC DYW
Sbjct: 566 ANREINVRDRLRFHHFKDGSCSCQDYW 592



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/348 (29%), Positives = 181/348 (52%), Gaps = 11/348 (3%)

Query: 100 VHSLLTRSKLEPNSVILNSLISL-YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
           +H+ +  + L     ++  L+S  Y+    ++   ++F S+  K D   + S+I+     
Sbjct: 38  IHARIIITGLGRTRSLITKLLSFAYAAASPISYTRRLFFSI-PKPDTFLFHSLITLTSKF 96

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
               +++  +  ML      + Y FSAVI++ ++    +IG  I+  +  CGY   D  V
Sbjct: 97  SFPQESLLCYRRMLLANISSSNYTFSAVIKSSADLTAFSIGETIHCHVYICGY-GLDAYV 155

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             AL+  + K S  +  A KVFDKM EK  V W  MI+   Q G  ++A+ LF  M   G
Sbjct: 156 QAALVSFYAK-SGHVMIARKVFDKMPEKTVVAWNSMISGYEQNGFGKEAVELFFLMQDLG 214

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD  T   ++SAC+++     G  +H +  R    L+V +G +L++MY++C   G+V 
Sbjct: 215 VKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVVLGTALMNMYSRC---GNVS 271

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +R+VFD M + N+++WTA+I+GY    G   +A++LF++M      PN+ TF +VL AC
Sbjct: 272 KAREVFDSMEEKNIVAWTAMISGYGMH-GHGSQAIELFNEMSFDGPRPNNVTFVAVLSAC 330

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNS--LISMYARSGRMEDARK 444
            +    +   Q++T  +K+   L   V +   ++ M  R+G + +A +
Sbjct: 331 AHAGLVDEGRQIFT-TMKQEYGLVPSVEHQVCMVDMLGRAGHLNEAYQ 377



 Score = 92.4 bits (228), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 4/206 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++A+    LM   G  PD  T+  LL +C +     LG  VH  + R+  + N V
Sbjct: 196 QNGFGKEAVELFFLMQDLGVKPDSSTFVSLLSACAQVGAIGLGFWVHEYIARNCFDLNVV 255

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +L+++YS+CG++++A ++F SM  +++IV+W++MIS Y   G    AI +F EM   
Sbjct: 256 LGTALMNMYSRCGNVSKAREVFDSM-EEKNIVAWTAMISGYGMHGHGSQAIELFNEMSFD 314

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN   F AV+ AC++   V  G  I+  + +       V     ++DM  +    L 
Sbjct: 315 GPRPNNVTFVAVLSACAHAGLVDEGRQIFTTMKQEYGLVPSVEHQVCMVDMLGRAG-HLN 373

Query: 235 SAYKVFDKMTEKNTVG--WTLMITRC 258
            AY+     + K      WT M+  C
Sbjct: 374 EAYQFIKNTSPKEPAPAVWTAMLGAC 399


>gi|356519952|ref|XP_003528632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 693

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/630 (36%), Positives = 365/630 (57%), Gaps = 42/630 (6%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E+ + VFD+M  +++V +  +I      G    A+++ + M   GF P +++    + A
Sbjct: 105 VENLHVVFDQMPYRDSVSYNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQA 164

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS+L     GKQ+H   +   L  +  V  ++ DMYAKC   G +D +R +FD M+D NV
Sbjct: 165 CSQLLDLRHGKQIHGRIVVADLGENTFVRNAMTDMYAKC---GDIDKARLLFDGMIDKNV 221

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW  +I+GYV+ G  + E + LF++M    + P+  T ++VL A               
Sbjct: 222 VSWNLMISGYVKMGNPN-ECIHLFNEMQLSGLKPDLVTVSNVLNA--------------- 265

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
                               Y R GR++DAR  F  L +K+ + + TM+  YA+N   E 
Sbjct: 266 --------------------YFRCGRVDDARNLFIKLPKKDEICWTTMIVGYAQNGREED 305

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A+ L  ++    V   +YT +S++S  + + ++  G+ +H +++  G +++  + +AL+ 
Sbjct: 306 AWMLFGDMLRRNVKPDSYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVD 365

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY +C     A  +F+ M  RNVI+W +MI G+A++G    AL ++ +M  +  KP+ IT
Sbjct: 366 MYCKCGVTLDARVIFETMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNIT 425

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++ VLSAC +A ++ EG K+F S+  EHGI   ++HYACM+ LLGRSGS+ +A++ I+ M
Sbjct: 426 FVGVLSACINADMVKEGQKYFDSI-SEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGM 484

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P   +  +W T L  C   GD +  + AA  + E DP++   +I+LSNLYA+ G W+ VA
Sbjct: 485 PHEPNYRIWSTLLSVC-AKGDLKNAELAASHLFELDPRNAGPYIMLSNLYAACGRWKDVA 543

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R  MKE+N  K A  SW+E  NKVH+F   +  HP+  +IY EL++L   +++ GY P
Sbjct: 544 VVRSLMKEKNAKKFAAYSWVEVGNKVHRFVSEDHYHPEVGKIYGELNRLISILQQIGYNP 603

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS-KPIRVFKNLRVCGDCHTAIKYI 831
           DTN VLH + EE+K + +  HSEK+A+AF LI       PIR+ KN+RVC DCH  +K+ 
Sbjct: 604 DTNIVLHNVGEEEKFRSISYHSEKLALAFALIRKPNGVAPIRIIKNIRVCDDCHVFMKFA 663

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S+   R I++RDSNRFHH   GKCSCND W
Sbjct: 664 SITISRPIIMRDSNRFHHFFGGKCSCNDNW 693



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 145/541 (26%), Positives = 252/541 (46%), Gaps = 76/541 (14%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP-NSVILNS 118
           QK    +DL+   G     D Y+ L+  C R+ +F   K + S +  +  +P +S I N 
Sbjct: 5   QKLHQAIDLLYSHG-LASFDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQ 63

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV---------------------- 156
           L+ LY+K G L++A  +F +M  KRD+ SW++++S+Y                       
Sbjct: 64  LLHLYAKFGKLSDAQNVFDNM-TKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVS 122

Query: 157 ---------NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
                    + G    A+ + V M E GF P +Y     ++ACS   ++  G  I+G ++
Sbjct: 123 YNTLIACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIV 182

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
                  +  V  A+ DM+ K   D++ A  +FD M +KN V W LMI+   ++G P + 
Sbjct: 183 -VADLGENTFVRNAMTDMYAKCG-DIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNEC 240

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           I LF +M LSG  PD  T+S V++A                                   
Sbjct: 241 IHLFNEMQLSGLKPDLVTVSNVLNA----------------------------------- 265

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           Y +C   G VDD+R +F ++   + + WT +I GY Q+ GR+++A  LF DM++  V P+
Sbjct: 266 YFRC---GRVDDARNLFIKLPKKDEICWTTMIVGYAQN-GREEDAWMLFGDMLRRNVKPD 321

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            +T +S++ +C  L      + V+   V  G      V ++L+ MY + G   DAR  FE
Sbjct: 322 SYTISSMVSSCAKLASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFE 381

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
           ++  +N++++N M+  YA+N    +A  L   ++         TF  +LS   +   + +
Sbjct: 382 TMPIRNVITWNAMILGYAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKE 441

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFA 566
           G++    I + G       Y  +I++  R  +V+ A  + + M  + N   W+++++  A
Sbjct: 442 GQKYFDSISEHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCA 501

Query: 567 K 567
           K
Sbjct: 502 K 502



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 126/434 (29%), Positives = 205/434 (47%), Gaps = 45/434 (10%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G   KA+  L  M + G  P   ++   L++C +  +   GK +H  +  + L  N+ +
Sbjct: 133 NGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLGENTFV 192

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N++  +Y+KCGD+++A  +F  M +K ++VSW+ MIS YV  G   + IH+F EM   G
Sbjct: 193 RNAMTDMYAKCGDIDKARLLFDGMIDK-NVVSWNLMISGYVKMGNPNECIHLFNEMQLSG 251

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P+    S V+ A                  +CG  D                      
Sbjct: 252 LKPDLVTVSNVLNA----------------YFRCGRVD---------------------D 274

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  +F K+ +K+ + WT MI    Q G   DA  LF DM+     PD +T+S +VS+C++
Sbjct: 275 ARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAK 334

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     G+ +H   +  G+   + V  +LVDMY KC   G   D+R +F+ M   NV++W
Sbjct: 335 LASLYHGQVVHGKVVVMGIDNSMLVSSALVDMYCKC---GVTLDARVIFETMPIRNVITW 391

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I GY Q+ G+  EA+ L+  M Q    P++ TF  VL AC N       ++ +    
Sbjct: 392 NAMILGYAQN-GQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSIS 450

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN--LNSEK 472
           + G A        +I++  RSG ++ A    + +  E N   ++T++   AK    N+E 
Sbjct: 451 EHGIAPTLDHYACMITLLGRSGSVDKAVDLIQGMPHEPNYRIWSTLLSVCAKGDLKNAEL 510

Query: 473 AFELLHEIEDTGVG 486
           A   L E++    G
Sbjct: 511 AASHLFELDPRNAG 524



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/425 (22%), Positives = 178/425 (41%), Gaps = 71/425 (16%)

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS-WAIRTGLALDVCVGCSLVDMYAK 330
           +D++ S  L      + +V  C+    F   K+L S   +      D  +   L+ +YAK
Sbjct: 11  IDLLYSHGLASFDDYTRLVLHCARANDFIQAKRLQSHMELNLFQPKDSFIHNQLLHLYAK 70

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG------------------------ 366
               G + D++ VFD M   +V SW  +++ Y + G                        
Sbjct: 71  F---GKLSDAQNVFDNMTKRDVYSWNTLLSAYAKMGMVENLHVVFDQMPYRDSVSYNTLI 127

Query: 367 ------GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
                 G   +A+K+   M +    P  ++  + L+AC  LLD    +Q++   V     
Sbjct: 128 ACFASNGHSGKALKVLVRMQEDGFQPTQYSHVNALQACSQLLDLRHGKQIHGRIVVADLG 187

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +  V N++  MYA+ G ++ AR  F+ + +KN+VS+N M+  Y K  N  +   L +E+
Sbjct: 188 ENTFVRNAMTDMYAKCGDIDKARLLFDGMIDKNVVSWNLMISGYVKMGNPNECIHLFNEM 247

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           + +G+     T +++L+                                    Y RC  V
Sbjct: 248 QLSGLKPDLVTVSNVLNA-----------------------------------YFRCGRV 272

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  +F ++  ++ I WT+MI G+A++G    A  +F  ML   +KP+  T  +++S+C
Sbjct: 273 DDARNLFIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSC 332

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           +    +  G +         GI   M   + +VD+  + G   +A     +MP+  +V+ 
Sbjct: 333 AKLASLYHG-QVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMPIR-NVIT 390

Query: 661 WRTFL 665
           W   +
Sbjct: 391 WNAMI 395



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 111/227 (48%), Gaps = 5/227 (2%)

Query: 36  FIAQPTTSEP-LSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           FI  P   E   +  ++ +  +GR + A      M ++   PD  T S ++ SC +  + 
Sbjct: 279 FIKLPKKDEICWTTMIVGYAQNGREEDAWMLFGDMLRRNVKPDSYTISSMVSSCAKLASL 338

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           + G++VH  +    ++ + ++ ++L+ +Y KCG   +A  IF++M   R++++W++MI  
Sbjct: 339 YHGQVVHGKVVVMGIDNSMLVSSALVDMYCKCGVTLDARVIFETMP-IRNVITWNAMILG 397

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G+ ++A+ ++  M +  F P+   F  V+ AC N + V  G   +  + + G   +
Sbjct: 398 YAQNGQVLEALTLYERMQQENFKPDNITFVGVLSACINADMVKEGQKYFDSISEHGIAPT 457

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRCTQ 260
                C +  +   GSVD   A  +   M  E N   W+ +++ C +
Sbjct: 458 LDHYACMITLLGRSGSVD--KAVDLIQGMPHEPNYRIWSTLLSVCAK 502


>gi|297800728|ref|XP_002868248.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314084|gb|EFH44507.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 725

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/637 (37%), Positives = 364/637 (57%), Gaps = 41/637 (6%)

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G PR  I  +  +   G   DR +   ++ A S++     G +LH +A +     D  V 
Sbjct: 93  GEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGMELHGFAFKIATLSDPFVE 152

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
             L+DMYA C   G ++ +R VFD M   +V++W  +I  Y + G  D EA KLF +M  
Sbjct: 153 TGLMDMYAAC---GRINYARNVFDEMSQRDVVTWNTMIERYCRFGLLD-EAFKLFEEMKD 208

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA------- 434
             V P+     +++ ACG   +      +Y   ++    +D  +  +L++MYA       
Sbjct: 209 SNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLLTALVTMYAGAGCMDM 268

Query: 435 ------------------------RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
                                   ++GR++DAR  F+    K+LV + TM+ AYA++ + 
Sbjct: 269 AMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLVCWTTMISAYAESDHP 328

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           ++A  +  E+  +G+     T  S++S   ++G + K + +H     +G ES   I NAL
Sbjct: 329 QEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYTHLNGLESVLPIDNAL 388

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           I+MY++C  ++AA  VF++M  RNV+SW+SMI  FA HG A+ +L +F +M  + ++PN 
Sbjct: 389 INMYAKCGGLDAARDVFEKMPTRNVVSWSSMINAFAMHGEASDSLSLFAQMKQENVEPNE 448

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T++ VL  CSH+GL+ EG K F SM DE+ I  ++EHY CMVDL GR+  L EALE I 
Sbjct: 449 VTFVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEVIE 508

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           SMP++ +V++W + + ACRVHG+ ELG+ AA+ IL+ +P    A +L+SN+YA    W+Y
Sbjct: 509 SMPMAPNVVIWGSLMSACRVHGELELGELAAKRILKLEPDHDGALVLMSNIYAREYRWDY 568

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V  IR  M+++ + KE G S I+ + K H+F +G+  H ++ EIY +L ++  K+K  GY
Sbjct: 569 VRIIRWIMEKKKVFKEKGLSRIDLNGKSHEFLIGDKRHKQSNEIYTKLYEVVSKLKLAGY 628

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP------IRVFKNLRVCGDC 824
           +PD   VL ++EEE+K   +  HSEK+A+ FGL++  K +       IR+ KNLRVC DC
Sbjct: 629 VPDGGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNKEKEEEKGSCGVIRIVKNLRVCEDC 688

Query: 825 HTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           H   K +S V   EI++RD  RFH  KDG CSC DYW
Sbjct: 689 HAFFKLVSKVYELEIIVRDRTRFHRYKDGLCSCRDYW 725



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 134/520 (25%), Positives = 224/520 (43%), Gaps = 80/520 (15%)

Query: 40  PTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
           P     + N L+  L+  G  +  I     +   G   D  ++  +LK+  +      G 
Sbjct: 75  PLPESIVFNSLLRDLSRSGEPRATILFYQRIRHVGGRFDRISFPPILKAVSKVSALFEGM 134

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
            +H    +     +  +   L+ +Y+ CG +N A  +F  M ++RD+V+W++MI  Y   
Sbjct: 135 ELHGFAFKIATLSDPFVETGLMDMYAACGRINYARNVFDEM-SQRDVVTWNTMIERYCRF 193

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVC 217
           G   +A  +F EM +    P+E     ++ AC  T N+     IY FL++     D+ + 
Sbjct: 194 GLLDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYDFLIENDVRMDTHLL 253

Query: 218 V-------GCALIDM----FVKGSV-----------------DLESAYKVFDKMTEKNTV 249
                   G   +DM    F K SV                  L+ A  +FD+   K+ V
Sbjct: 254 TALVTMYAGAGCMDMAMEFFRKMSVRNLFVSTAMVSGYSKAGRLDDARVIFDQTEMKDLV 313

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            WT MI+   +   P++A+R+F +M  SG  PD  T+  V+SAC  L      K +H + 
Sbjct: 314 CWTTMISAYAESDHPQEALRVFEEMCCSGIKPDVVTMLSVISACVNLGTLDKAKWVHRYT 373

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
              GL   + +  +L++MYAKC   G +D +R VF++M   NV+SW+++I  +    G  
Sbjct: 374 HLNGLESVLPIDNALINMYAKC---GGLDAARDVFEKMPTRNVVSWSSMINAFAMH-GEA 429

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
            +++ LF+ M Q  V PN  TF  VL  C                               
Sbjct: 430 SDSLSLFAQMKQENVEPNEVTFVGVLYGC------------------------------- 458

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNLNSEKAFELLHEIEDTG 484
               + SG +E+ +K F S+ ++  ++     Y  MVD + +     +A E+   IE   
Sbjct: 459 ----SHSGLVEEGKKIFASMTDEYNITPKIEHYGCMVDLFGRANLLREALEV---IESMP 511

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
           +  +   + SL+S     G +  GE    RI+K   E +H
Sbjct: 512 MAPNVVIWGSLMSACRVHGELELGELAAKRILK--LEPDH 549


>gi|302755875|ref|XP_002961361.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
 gi|300170020|gb|EFJ36621.1| hypothetical protein SELMODRAFT_76175 [Selaginella moellendorffii]
          Length = 1121

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 266/824 (32%), Positives = 439/824 (53%), Gaps = 27/824 (3%)

Query: 55   NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF--HLGKLVHSLLTRSKLEPN 112
             +GR ++    L  M  +G  PD      LL  C  SR        + H  +    L+  
Sbjct: 308  ENGRRRETWGLLRSMAVEGIKPDKVLLLTLLNVC-SSRGVLDEDSWMAHDYIVGGGLDRE 366

Query: 113  SVILNSLISLYSKCGDLNEANKIFKSMGN--KRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            +V+  +L+S++++CG +++A +IF+ + +   + I  W++MI++Y +RG   +A+ +   
Sbjct: 367  AVVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDS 426

Query: 171  MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            +   G  PN   F + + ACS+ ++   G  ++  + + G FD +V V  AL+ M+ K  
Sbjct: 427  LQLQGVKPNCITFISSLGACSSLQD---GRALHLLIHESG-FDQEVSVANALVTMYGKCG 482

Query: 231  VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
              L+SA K+F +M EK+   W   I   +  G   + I+L   M   GFL ++ T    +
Sbjct: 483  SLLDSA-KLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTAL 541

Query: 291  SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            ++C++      G  +H   ++ G   D  V  ++++MY +C   G +D +R++F R+   
Sbjct: 542  NSCTDPASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRC---GGLDRAREIFTRVKTF 598

Query: 351  NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
            +V+ WT ++T Y Q G R K+ ++ F  M+   + P   T  +++    +    +  + V
Sbjct: 599  DVILWTGMLTVYCQLG-RTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGV 657

Query: 411  YTHAV--KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN- 467
            +  ++  + G   +  V NSLI M++    +  AR  F+   EK++  + TM+ AY K  
Sbjct: 658  WISSLAWESGLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGE 717

Query: 468  LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
               E A  L   +   G+  S+ T  + +S    +      +++H R  + G ES  C+ 
Sbjct: 718  RGKEAALTLFARMLLEGLEPSSVTLVTAMSACGGLADPSSSKRVHERARELGLESETCVA 777

Query: 528  NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
            N L+ MY +  +V+ A  +F     RNV +W +M   + + G     L +   M  DG +
Sbjct: 778  NGLVDMYGKAGDVDTARYIFDRALRRNVTTWNAMAGAYRQCGVTRGVLWLVRTMQRDGYR 837

Query: 588  PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
            P+ +T++++LS C H+GL+ E   +F +M  E GI    +HY+C++DLL R+G L +A +
Sbjct: 838  PDSVTFVSLLSVCGHSGLLEEARYNFVAMRREFGIDPSPKHYSCVIDLLARAGELQQAED 897

Query: 648  FIRSMPLS--ADVLVWRTFLGACRVHGDTELGKHA-------AEMILEQDPQDP-AAHIL 697
            FI  + +S  A   +W   LGACR  G++              E +  +   DP AAH+ 
Sbjct: 898  FIARISVSSPASSPMWMALLGACRSLGNSSSRARRAARNAMDVEKMEPRSQHDPSAAHVA 957

Query: 698  LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
            L+N+ A++G+W+   +IRK M E+ L KE G S I   N++H+F  G+  HP+  EIYAE
Sbjct: 958  LANICAASGNWDEALSIRKAMAEKGLRKEPGRSLIAVKNRLHEFVAGDRDHPRREEIYAE 1017

Query: 758  LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
            L +L   + + GY+ DT  V H + E  K   L  HSEK+AVAFG++ST     +R+ KN
Sbjct: 1018 LRRLERAMVDRGYVVDTGMVTHNVGEADKRDLLGCHSEKLAVAFGVLSTPPGSSLRIIKN 1077

Query: 818  LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            LR CGDCHTAIK IS + GREIV+RDSNRFHH ++G CSC DYW
Sbjct: 1078 LRACGDCHTAIKLISAIEGREIVVRDSNRFHHFRNGSCSCGDYW 1121



 Score =  271 bits (694), Expect = 8e-70,   Method: Compositional matrix adjust.
 Identities = 196/697 (28%), Positives = 354/697 (50%), Gaps = 45/697 (6%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ + + G   +A+     M + G  PD   Y+ LLK C R  +   GK +H+ +  S L
Sbjct: 94  LVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGRLGDLAQGKRLHAQIRESGL 153

Query: 110 ------EPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
                 E  +  L N L+ +Y KCG  +EA + F S+ +K +I SW+S++ +Y + G   
Sbjct: 154 LLDDREESGARFLGNCLVQMYGKCGRTDEAQRAFDSIAHK-NIFSWTSILVAYFHAGLHA 212

Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
            A+  F +M++ G  P+   F A +  C   + +  G  I+   ++    DSD+ +G AL
Sbjct: 213 QALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIH-RQIQDKPLDSDLEIGNAL 271

Query: 223 IDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           + M+ K G +DL  A ++FD +  +N + WT++++   + G  R+   L   M + G  P
Sbjct: 272 VSMYGKCGRLDL--AKELFDCLERRNVISWTILVSVFAENGRRRETWGLLRSMAVEGIKP 329

Query: 282 DRFTLSGVVSACSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           D+  L  +++ CS   +      + H + +  GL  +  V  +L+ M+A+C   G VD +
Sbjct: 330 DKVLLLTLLNVCSSRGVLDEDSWMAHDYIVGGGLDREAVVATALLSMFARC---GRVDKA 386

Query: 341 RKVFDRMLDHN---VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           R++F+++ DH+   +  W A+IT Y   G   KEA+ L   +    V PN  TF S L A
Sbjct: 387 REIFEKVADHSAQVIECWNAMITAYAHRGC-SKEALFLLDSLQLQGVKPNCITFISSLGA 445

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L D   A  +  H  + G   +  V N+L++MY + G + D+ K F  + EK+L S+
Sbjct: 446 CSSLQDGR-ALHLLIH--ESGFDQEVSVANALVTMYGKCGSLLDSAKLFSEMAEKDLASW 502

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N+ + A++ +  S++  +LL ++   G      TF + L+  +   ++  G  +H +I++
Sbjct: 503 NSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQ 562

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
            G+E++  + +A+I+MY RC  ++ A ++F  ++  +VI WT M+T + + G   + +E 
Sbjct: 563 CGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGMLTVYCQLGRTKQVMEH 622

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR------SMYDEHGIVQRMEHYAC 631
           F  ML +G+KP G+T + +++  + +GL     +HFR      S+  E G+         
Sbjct: 623 FRSMLHEGLKPTGVTLVNLITCVADSGL-----EHFRDGVWISSLAWESGLESETMVANS 677

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA-----AEMILE 686
           ++++     SL++A       P  +  L   T + A  V G  E GK A     A M+LE
Sbjct: 678 LIEMFSEFRSLSQARAIFDRNPEKSVAL--HTTMLAAYVKG--ERGKEAALTLFARMLLE 733

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
               +P++  L++ + A  G  +  ++ R   + R L
Sbjct: 734 --GLEPSSVTLVTAMSACGGLADPSSSKRVHERAREL 768



 Score =  239 bits (611), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 169/631 (26%), Positives = 312/631 (49%), Gaps = 41/631 (6%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKL------EPNSVIL-NSLISLYSKCGDLNEA 132
           +Y+ LLK C R  +   GK +H+ +  S L      E  +  L N L+ +Y KCG  +EA
Sbjct: 16  SYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 75

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            + F S+ +K +I SW+S++ +Y + G    A+  F +M++ G  P+   ++ +++ C  
Sbjct: 76  QRAFDSIAHK-NIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVYARLLKECGR 134

Query: 193 TENVAIGHIIYGFLLKCGYFDSDV------CVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
             ++A G  ++  + + G    D        +G  L+ M+ K G  D   A + FD +  
Sbjct: 135 LGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTD--EAQRAFDSIAH 192

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           KN   WT ++      G    A+  F  MI +G  PDR      ++ C  L+    G  +
Sbjct: 193 KNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGI 252

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H       L  D+ +G +LV MY KC   G +D ++++FD +   NV+SWT +++ + ++
Sbjct: 253 HRQIQDKPLDSDLEIGNALVSMYGKC---GRLDLAKELFDCLERRNVISWTILVSVFAEN 309

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDD 423
            GR +E   L   M    + P+     ++L  C +  +LD + +   + + V  G   + 
Sbjct: 310 -GRRRETWGLLRSMAVEGIKPDKVLLLTLLNVCSSRGVLDED-SWMAHDYIVGGGLDREA 367

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKN---LVSYNTMVDAYAKNLNSEKAFELLHEI 480
            V  +L+SM+AR GR++ AR+ FE + + +   +  +N M+ AYA    S++A  LL  +
Sbjct: 368 VVATALLSMFARCGRVDKAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSL 427

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  GV  +  TF S L   SS   +  G  +H  I +SGF+    + NAL++MY +C ++
Sbjct: 428 QLQGVKPNCITFISSLGACSS---LQDGRALHLLIHESGFDQEVSVANALVTMYGKCGSL 484

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             + ++F EM ++++ SW S I   + HG +   +++  +M  +G     +T++  L++C
Sbjct: 485 LDSAKLFSEMAEKDLASWNSAIAAHSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSC 544

Query: 601 SHAGLISEG----WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           +    + +G     K  +  Y+   +V      + ++++ GR G L  A E    +  + 
Sbjct: 545 TDPASLQDGVLMHEKIVQCGYEADTVVA-----SAVINMYGRCGGLDRAREIFTRVK-TF 598

Query: 657 DVLVWRTFLGA-CRVHGDTELGKHAAEMILE 686
           DV++W   L   C++    ++ +H   M+ E
Sbjct: 599 DVILWTGMLTVYCQLGRTKQVMEHFRSMLHE 629



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 165/638 (25%), Positives = 292/638 (45%), Gaps = 31/638 (4%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L+ + + G   +A+     M + G  PD   +   L  C   +    G  +H  +    L
Sbjct: 202 LVAYFHAGLHAQALERFHQMIKAGVEPDRLVFLAALNVCGILKRLEDGAGIHRQIQDKPL 261

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + +  I N+L+S+Y KCG L+ A ++F  +  +R+++SW+ ++S +   G++ +   +  
Sbjct: 262 DSDLEIGNALVSMYGKCGRLDLAKELFDCL-ERRNVISWTILVSVFAENGRRRETWGLLR 320

Query: 170 EMLELGFCPNEYCFSAVIRACSNT----ENVAIGH-IIYGFLLKCGYFDSDVCVGCALID 224
            M   G  P++     ++  CS+     E+  + H  I G     G  D +  V  AL+ 
Sbjct: 321 SMAVEGIKPDKVLLLTLLNVCSSRGVLDEDSWMAHDYIVG-----GGLDREAVVATALLS 375

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTV---GWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
           MF + G VD   A ++F+K+ + +      W  MIT     GC ++A+ L   + L G  
Sbjct: 376 MFARCGRVD--KAREIFEKVADHSAQVIECWNAMITAYAHRGCSKEALFLLDSLQLQGVK 433

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+  T    + ACS L+    G+ LH     +G   +V V  +LV MY KC   GS+ DS
Sbjct: 434 PNCITFISSLGACSSLQ---DGRALHLLIHESGFDQEVSVANALVTMYGKC---GSLLDS 487

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            K+F  M + ++ SW + I  +    GR  E +KL   M          TF + L +C +
Sbjct: 488 AKLFSEMAEKDLASWNSAIAAHSYH-GRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTD 546

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                    ++   V+ G   D  V +++I+MY R G ++ AR+ F  +   +++ +  M
Sbjct: 547 PASLQDGVLMHEKIVQCGYEADTVVASAVINMYGRCGGLDRAREIFTRVKTFDVILWTGM 606

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA--IGKGEQIHARIIKS 518
           +  Y +   +++  E    +   G+  +  T  +L++  +  G      G  I +   +S
Sbjct: 607 LTVYCQLGRTKQVMEHFRSMLHEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWES 666

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK--HGFAARALE 576
           G ES   + N+LI M+S   ++  A  +F    +++V   T+M+  + K   G  A AL 
Sbjct: 667 GLESETMVANSLIEMFSEFRSLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEA-ALT 725

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +ML +G++P+ +T +  +SAC      S   K       E G+         +VD+ 
Sbjct: 726 LFARMLLEGLEPSSVTLVTAMSACGGLADPSSS-KRVHERARELGLESETCVANGLVDMY 784

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           G++G +  A  +I    L  +V  W    GA R  G T
Sbjct: 785 GKAGDVDTA-RYIFDRALRRNVTTWNAMAGAYRQCGVT 821



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 119/401 (29%), Positives = 188/401 (46%), Gaps = 25/401 (6%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H   GR  + I  LD M  +G   +  T+   L SC    +   G L+H  + +   E +
Sbjct: 509 HSYHGRSDECIKLLDQMRGEGFLYEKVTFLTALNSCTDPASLQDGVLMHEKIVQCGYEAD 568

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +V+ +++I++Y +CG L+ A +IF  +    D++ W+ M++ Y   G+    +  F  ML
Sbjct: 569 TVVASAVINMYGRCGGLDRAREIFTRV-KTFDVILWTGMLTVYCQLGRTKQVMEHFRSML 627

Query: 173 ELGFCPNEYCFSAVIR--ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
             G  P       +I   A S  E+   G  I     + G  +S+  V  +LI+MF +  
Sbjct: 628 HEGLKPTGVTLVNLITCVADSGLEHFRDGVWISSLAWESG-LESETMVANSLIEMFSEFR 686

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD-AIRLFLDMILSGFLPDRFTLSGV 289
             L  A  +FD+  EK+    T M+    +    ++ A+ LF  M+L G  P   TL   
Sbjct: 687 -SLSQARAIFDRNPEKSVALHTTMLAAYVKGERGKEAALTLFARMLLEGLEPSSVTLVTA 745

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           +SAC  L   +S K++H  A   GL  + CV   LVDMY K    G VD +R +FDR L 
Sbjct: 746 MSACGGLADPSSSKRVHERARELGLESETCVANGLVDMYGKA---GDVDTARYIFDRALR 802

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV +W A+   Y Q  G  +  + L   M +    P+  TF S+L  CG+   S + E+
Sbjct: 803 RNVTTWNAMAGAYRQC-GVTRGVLWLVRTMQRDGYRPDSVTFVSLLSVCGH---SGLLEE 858

Query: 410 VYTH--AVKRGRALD------DCVGNSLISMYARSGRMEDA 442
              +  A++R   +D       CV    I + AR+G ++ A
Sbjct: 859 ARYNFVAMRREFGIDPSPKHYSCV----IDLLARAGELQQA 895



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 57/202 (28%), Positives = 102/202 (50%), Gaps = 16/202 (7%)

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF------ESN-HCIYNALIS 532
           I  +GV  +  ++A LL     +G + +G+++HA+I +SG       ES    + N L+ 
Sbjct: 5   ISRSGVDDACRSYARLLKECGRLGDLAQGKRLHAQIRESGLLLDDREESGARFLGNCLVQ 64

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY +C   + A + F  +  +N+ SWTS++  +   G  A+ALE F++M+  G++P+ + 
Sbjct: 65  MYGKCGRTDEAQRAFDSIAHKNIFSWTSILVAYFHAGLHAQALERFHQMIKAGVEPDRLV 124

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIV--QRMEHYA-----CMVDLLGRSGSLTEA 645
           Y  +L  C   G +++G K   +   E G++   R E  A     C+V + G+ G   EA
Sbjct: 125 YARLLKECGRLGDLAQG-KRLHAQIRESGLLLDDREESGARFLGNCLVQMYGKCGRTDEA 183

Query: 646 LEFIRSMPLSADVLVWRTFLGA 667
                S+    ++  W + L A
Sbjct: 184 QRAFDSIA-HKNIFSWTSILVA 204


>gi|297794157|ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310798|gb|EFH41222.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 720

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 252/683 (36%), Positives = 394/683 (57%), Gaps = 12/683 (1%)

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + FS ++R C +  +++    I   +LK G F  ++  G  L+D  +K   ++  A ++F
Sbjct: 48  HTFSQLLRQCIDERSISGIKNIQAQMLKSG-FPVELS-GSKLVDASLKCG-EIGYARQLF 104

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D M E++ V W  +I    +    ++A+ ++  MI +  LPD +TLS V  A S+L L  
Sbjct: 105 DGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEK 164

Query: 301 SGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             ++ H  A+  GL + +V VG +LVDMY K    G   +++ V DR+ + +V+  TA+I
Sbjct: 165 EAQRSHGLAVILGLEVSNVFVGSALVDMYVKF---GKTREAKLVLDRVEEKDVVLITALI 221

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            GY Q G  D EAVK F  M+  +V PN +T+ASVL +CGNL D    + ++   VK G 
Sbjct: 222 VGYSQKG-EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGF 280

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
                   SL++MY R   ++D+   F+ +   N V++ +++    +N   E A     +
Sbjct: 281 ESALASQTSLLTMYLRCSLVDDSLLVFKCIKYPNQVTWTSLISGLVQNGREETALIEFRK 340

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +    V  +++T +S L G S++    +G Q+H  + K GF+ +    + LI +Y +C  
Sbjct: 341 MMRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGC 400

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
            + A  VF  + + +VIS  +MI  +A++GF   ALE+F +M+  G++PN +T ++VL A
Sbjct: 401 SDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLA 460

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           C+++GL+ EG + F S + +  I+   +HYACMVD+LGR+G L EA E + +   + D++
Sbjct: 461 CNNSGLVEEGCELFDS-FRKDKIMLTNDHYACMVDMLGRAGRLEEA-EMLITEVTNPDLV 518

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           +WRT L AC+VH   E+ +     ILE  P D    ILLSNLYAS G W+ V  ++ +MK
Sbjct: 519 LWRTLLSACKVHRKVEMAERITRKILEIAPGDEGTLILLSNLYASTGKWKRVIEMKSKMK 578

Query: 720 ERNLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           E  L K    SW+E D + H F  G+  SHP + +I   L++L  K K+ GY+ D + V 
Sbjct: 579 EMKLKKNPAMSWVEIDKETHTFMAGDLFSHPNSEQILENLEELIKKAKDLGYVEDKSCVF 638

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
            ++EE  K + L QHSEK+A+AF  +  +    IR+ KNLRVC DCH+ IK +S +  RE
Sbjct: 639 QDMEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRIIKRE 697

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I+ RDS RFHH +DG CSC DYW
Sbjct: 698 IICRDSKRFHHFRDGSCSCGDYW 720



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 146/503 (29%), Positives = 260/503 (51%), Gaps = 7/503 (1%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S LL+ CI  R+    K + + + +S   P  +  + L+    KCG++  A ++F  M
Sbjct: 49  TFSQLLRQCIDERSISGIKNIQAQMLKSGF-PVELSGSKLVDASLKCGEIGYARQLFDGM 107

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +R IV+W+S+I+ Y+   +  +A+ M+  M+     P+EY  S+V +A S+       
Sbjct: 108 P-ERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLEKEA 166

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
              +G  +  G   S+V VG AL+DM+VK     E A  V D++ EK+ V  T +I   +
Sbjct: 167 QRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE-AKLVLDRVEEKDVVLITALIVGYS 225

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q G   +A++ F  M++    P+ +T + V+ +C  L+   +GK +H   +++G    + 
Sbjct: 226 QKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALA 285

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
              SL+ MY +C++   VDDS  VF  +   N ++WT++I+G VQ+ GR++ A+  F  M
Sbjct: 286 SQTSLLTMYLRCSL---VDDSLLVFKCIKYPNQVTWTSLISGLVQN-GREETALIEFRKM 341

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           ++  V PN FT +S L+ C NL       QV+    K G   D   G+ LI +Y + G  
Sbjct: 342 MRDSVKPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYGFDRDKYAGSGLIELYGKCGCS 401

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           + AR  F++L E +++S NTM+ +YA+N    +A EL   + + G+  +  T  S+L   
Sbjct: 402 DMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLAC 461

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           ++ G + +G ++     K      +  Y  ++ M  R   +E A  +  E+ + +++ W 
Sbjct: 462 NNSGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWR 521

Query: 560 SMITGFAKHGFAARALEIFYKML 582
           ++++    H     A  I  K+L
Sbjct: 522 TLLSACKVHRKVEMAERITRKIL 544



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 149/306 (48%), Gaps = 8/306 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   +A+     M  +   P+  TY+ +L SC   ++   GKL+H L+ +S  E      
Sbjct: 228 GEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFESALASQ 287

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            SL+++Y +C  ++++  +FK +      V+W+S+IS  V  G++  A+  F +M+    
Sbjct: 288 TSLLTMYLRCSLVDDSLLVFKCIKYPNQ-VTWTSLISGLVQNGREETALIEFRKMMRDSV 346

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN +  S+ +R CSN      G  ++G + K G FD D   G  LI+++ K G  D+  
Sbjct: 347 KPNSFTLSSALRGCSNLAMFEEGRQVHGIVSKYG-FDRDKYAGSGLIELYGKCGCSDM-- 403

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD ++E + +    MI    Q G  R+A+ LF  MI  G  P+  T+  V+ AC+ 
Sbjct: 404 ARLVFDTLSEVDVISLNTMIYSYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNN 463

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
             L   G +L     +  + L       +VDM  +    G ++++  +   + + +++ W
Sbjct: 464 SGLVEEGCELFDSFRKDKIMLTNDHYACMVDMLGRA---GRLEEAEMLITEVTNPDLVLW 520

Query: 356 TAIITG 361
             +++ 
Sbjct: 521 RTLLSA 526



 Score = 63.2 bits (152), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 55/222 (24%), Positives = 102/222 (45%), Gaps = 17/222 (7%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T+ +TF+ LL       +I   + I A+++KSGF       + L+    +C  +  A Q+
Sbjct: 45  TTTHTFSQLLRQCIDERSISGIKNIQAQMLKSGFPV-ELSGSKLVDASLKCGEIGYARQL 103

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  M +R++++W S+I  + KH  +  A+E++  M+++ + P+  T  +V  A S   L 
Sbjct: 104 FDGMPERHIVTWNSIIAYYIKHRRSKEAVEMYRLMISNNVLPDEYTLSSVFKAFSDLSLE 163

Query: 607 SEGWKHFRSMYDEHGI-------VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
            E  +        HG+       V  +   + +VD+  + G   EA   +  +     VL
Sbjct: 164 KEAQR-------SHGLAVILGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRVEEKDVVL 216

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILE--QDPQDPAAHILLS 699
           +    +G  +   DTE  K    M++E  Q  +   A +L+S
Sbjct: 217 ITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLIS 258


>gi|359483597|ref|XP_002272690.2| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial [Vitis vinifera]
          Length = 676

 Score =  447 bits (1150), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/632 (38%), Positives = 352/632 (55%), Gaps = 45/632 (7%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DL  A K+FD+M E++ V WT MI    Q G    A  LF  M      P R        
Sbjct: 88  DLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM------PFR-------- 133

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
                                    D+    S++  Y  C  +G V+D  ++F  M   N
Sbjct: 134 -------------------------DIAAWNSMI--YGYC-CNGRVEDGLRLFQEMPCRN 165

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQ 409
           V+SWT++I G  Q G R +EA+ LF  M+    +V P   T+  V+ AC N        Q
Sbjct: 166 VISWTSMIGGLDQHG-RSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQ 224

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++ H  K G + D  +  +LI+ YA   +MED+ + F      N+V +  +V  Y  N  
Sbjct: 225 IHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK 284

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E A ++  E+   GV  +  +F S L+    + A+  G +IH   +K G E++  + N+
Sbjct: 285 HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNS 344

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MY RC N+     +FK +  +N++SW S+I G A+HG    AL  F +M+   ++P+
Sbjct: 345 LIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPD 404

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            IT+  +LSACSH+G+  +G   F+   +      +++HYACMVD+LGRSG L EA E I
Sbjct: 405 EITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELI 464

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           R+MP+ A+ +VW   L AC +H   E+ + AA+ I++ +P   +A++LLSNLYASA  W 
Sbjct: 465 RNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWS 524

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V+ IR+ MK+R + K+ G SWI      ++F  G+ SHP +  IY +L+ L  K+KE G
Sbjct: 525 DVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELG 584

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+PD  F LH++E+EQK   L  HSE++A+ FGLIST +   I V KNLRVCGDCH+AIK
Sbjct: 585 YVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIK 644

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            I+ +  R+I++RDS RFHH  DG+CSC DYW
Sbjct: 645 LIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 676



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 236/526 (44%), Gaps = 70/526 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF-HLGKLVHSLLTRSKLEP 111
           HL + R+ +A    D    K + PD+  Y++++    R+  F H  +L + +  +  +  
Sbjct: 21  HLRNQRIDEARTVFD----KVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 76

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           NS+I          C DL  A K+F  M  +R +VSW++MI+ ++  GK   A  +F +M
Sbjct: 77  NSMIKGCF-----DCADLTMARKLFDEM-PERSVVSWTTMINGFLQFGKIEVAEGLFYKM 130

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
                                 +  A   +IYG+           C G            
Sbjct: 131 -------------------PFRDIAAWNSMIYGY----------CCNG------------ 149

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGV 289
            +E   ++F +M  +N + WT MI    Q G   +A+ LF  M+  G    P   T   V
Sbjct: 150 RVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCV 209

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC+       G Q+H+   + G + D  +  +L+  YA C     ++DS +VF   L 
Sbjct: 210 ITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK---QMEDSLRVFHGKLH 266

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV+ WTA++TGY     + ++A+K+F +M++  V PN  +F S L +C  L   +   +
Sbjct: 267 MNVVIWTALVTGY-GLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGRE 325

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++T AVK G   D  VGNSLI MY R G + D    F+ + +KN+VS+N+++   A++  
Sbjct: 326 IHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGC 385

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--- 526
              A    +++  + V     TF  LLS  S  G   KG     R +   F  N      
Sbjct: 386 GMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKG-----RCLFKYFSENKSAEVK 440

Query: 527 ---YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
              Y  ++ +  R   +E A ++ + M  + N + W  +++    H
Sbjct: 441 LDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 486



 Score =  122 bits (305), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 180/366 (49%), Gaps = 38/366 (10%)

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +D++R VFD++   +V  +T +ITGY ++  R   A++LF +M    V     ++ S++K
Sbjct: 27  IDEARTVFDKVSFPDVYLYTMMITGYARN-YRFDHALQLFYEMPVKDVV----SWNSMIK 81

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRA---------------------------LDDCVGNSL 429
            C +  D  +A +++    +R                               D    NS+
Sbjct: 82  GCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSM 141

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT-- 487
           I  Y  +GR+ED  + F+ +  +N++S+ +M+    ++  SE+A  L  ++   GV    
Sbjct: 142 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 201

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           ++ T+  +++  ++  A+ +G QIHA + K G+  +  I  ALI+ Y+ C  +E + +VF
Sbjct: 202 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 261

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
                 NV+ WT+++TG+  +     AL++F +M+ +G+ PN  ++ + L++C   GL +
Sbjct: 262 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC--CGLEA 319

Query: 608 EGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             W +   +   + G+   +     ++ +  R G+L + +   + +    +++ W + + 
Sbjct: 320 LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIV 378

Query: 667 ACRVHG 672
            C  HG
Sbjct: 379 GCAQHG 384



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 102/212 (48%), Gaps = 33/212 (15%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
            S+I+ + R+ R+++AR  F+ +   ++  Y  M+  YA+N   + A +L +E+    V 
Sbjct: 15  QSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVV 74

Query: 487 T---------------------------SAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           +                           S  ++ ++++G    G I   E +  ++    
Sbjct: 75  SWNSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRD 134

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
             +    +N++I  Y     VE   ++F+EM  RNVISWTSMI G  +HG +  AL +F 
Sbjct: 135 IAA----WNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFR 190

Query: 580 KMLADG--IKPNGITYIAVLSACSHAGLISEG 609
           +M+  G  +KP   TY  V++AC++A  + +G
Sbjct: 191 QMMGCGVEVKPTSSTYCCVITACANASALYQG 222



 Score = 45.4 bits (106), Expect = 0.14,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 14/152 (9%)

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           +Y  +I+ Y+R    + A Q+F EM  ++V+SW SMI G     F    L +  K+  + 
Sbjct: 44  LYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGC----FDCADLTMARKLFDEM 99

Query: 586 IKPNGITYIAVLSACSHAGLI--SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
            + + +++  +++     G I  +EG  +     D       +  Y C       +G + 
Sbjct: 100 PERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCC-------NGRVE 152

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           + L   + MP   +V+ W + +G    HG +E
Sbjct: 153 DGLRLFQEMPCR-NVISWTSMIGGLDQHGRSE 183



 Score = 40.4 bits (93), Expect = 4.4,   Method: Compositional matrix adjust.
 Identities = 34/151 (22%), Positives = 69/151 (45%), Gaps = 10/151 (6%)

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           Y ++I+ + R   ++ A  VF ++   +V  +T MITG+A++     AL++FY+M    +
Sbjct: 14  YQSMITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDV 73

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
               +++ +++  C     ++   K F  M  E  +V     +  M++   + G +  A 
Sbjct: 74  ----VSWNSMIKGCFDCADLTMARKLFDEM-PERSVVS----WTTMINGFLQFGKIEVAE 124

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
                MP   D+  W + +     +G  E G
Sbjct: 125 GLFYKMPFR-DIAAWNSMIYGYCCNGRVEDG 154


>gi|449446466|ref|XP_004140992.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Cucumis sativus]
          Length = 638

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 214/573 (37%), Positives = 359/573 (62%), Gaps = 4/573 (0%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++  C++ +L   GK  H+  +  GL  D+     L++MY+KC   GSVD +R+VFD M 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKC---GSVDFARQVFDEMP 126

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +++SW  +I G +   G + EA+ L   M +     + FT +SVL AC      +  +
Sbjct: 127 SRSLVSWNTMI-GSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQ 185

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            ++  A+K    L+  V  +L+ +YA+ G M+DA   FES+ ++++V++++M   Y +N 
Sbjct: 186 LLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPDRSVVTWSSMAAGYVQNE 245

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             E+A  L  +  +TG+    +  +S++   + + A+ +G+Q++A + KSGF SN  + +
Sbjct: 246 MYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVAS 305

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           +LI MY++C  +E +++VF+++E RNV+ W +MI+G ++H  +   + +F KM   G+ P
Sbjct: 306 SLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMGLSP 365

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N +T+++VLSAC H GL+ +G K+F  M  EH +   + HY+CMVD L R+G + EA + 
Sbjct: 366 NDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEAYDL 425

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I  +P +A   +W + L +CR HG+ EL + AA+ + + +P +   ++LLSN+YA+ G W
Sbjct: 426 ISKLPFNASASMWGSLLASCRTHGNLELAEVAAKKLFDIEPHNSGNYLLLSNMYAANGKW 485

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           + VA +RK +KE ++ KE G SWIE  +KVH F VGE +HPK +EIY++L+++  ++++ 
Sbjct: 486 DEVAKMRKLLKESDVKKERGKSWIEIKDKVHLFMVGERNHPKIVEIYSKLNEVMDELQKL 545

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY  +T   LH++ E  K + L  HSEK+A   GL+    + PIR+ KNLR+CGDCH+ +
Sbjct: 546 GYKVETQHDLHQVGESIKQELLRHHSEKLAFTMGLLFLPPNAPIRIMKNLRICGDCHSFM 605

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K  S    R++++RD+NRFHH K+G CSC D+W
Sbjct: 606 KLASKFFCRDVIVRDTNRFHHFKNGCCSCGDFW 638



 Score =  167 bits (424), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/318 (32%), Positives = 177/318 (55%), Gaps = 7/318 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +LK C + +    GK  H+ +    L+ + +  N LI++YSKCG ++ A ++F  M + R
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMGLKTDLLTSNILINMYSKCGSVDFARQVFDEMPS-R 128

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW++MI S    G++ +A+ + ++M   G   +E+  S+V+ AC+    ++   +++
Sbjct: 129 SLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQLLH 188

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
            F +K    D +V V  AL+D++ K  + ++ A  VF+ M +++ V W+ M     Q   
Sbjct: 189 AFAIKAA-MDLNVFVATALLDVYAKCGL-MKDAVCVFESMPDRSVVTWSSMAAGYVQNEM 246

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
              A+ LF     +G   D+F +S V+ AC+ L     GKQ+++   ++G   ++ V  S
Sbjct: 247 YEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIFVASS 306

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMYAKC   G +++S KVF  +   NV+ W A+I+G +    R  E + LF  M Q  
Sbjct: 307 LIDMYAKC---GGIEESYKVFRDVEKRNVVLWNAMISG-LSRHARSLEVMILFEKMQQMG 362

Query: 384 VAPNHFTFASVLKACGNL 401
           ++PN  TF SVL ACG++
Sbjct: 363 LSPNDVTFVSVLSACGHM 380



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 209/407 (51%), Gaps = 12/407 (2%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
           +++ C+  + +  G   +  +L  G   +D+     LI+M+ K GSVD   A +VFD+M 
Sbjct: 70  ILKLCAKRKLLLQGKACHAQILLMG-LKTDLLTSNILINMYSKCGSVDF--ARQVFDEMP 126

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            ++ V W  MI   TQ G   +A+ L L M   G     FT+S V+ AC+     +  + 
Sbjct: 127 SRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCALSECQL 186

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           LH++AI+  + L+V V  +L+D+YAKC   G + D+  VF+ M D +V++W+++  GYVQ
Sbjct: 187 LHAFAIKAAMDLNVFVATALLDVYAKC---GLMKDAVCVFESMPDRSVVTWSSMAAGYVQ 243

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           +   + +A+ LF    +  +  + F  +SV+ AC  L      +Q+     K G   +  
Sbjct: 244 NEMYE-QALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSGFCSNIF 302

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V +SLI MYA+ G +E++ K F  + ++N+V +N M+   +++  S +   L  +++  G
Sbjct: 303 VASSLIDMYAKCGGIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKMQQMG 362

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAA 543
           +  +  TF S+LS    +G + KG++    + K      N   Y+ ++   SR   +  A
Sbjct: 363 LSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNVFHYSCMVDTLSRAGQIFEA 422

Query: 544 FQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + +  ++  + +   W S++     HG    A E+  K L D I+P+
Sbjct: 423 YDLISKLPFNASASMWGSLLASCRTHGNLELA-EVAAKKLFD-IEPH 467



 Score =  108 bits (269), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/270 (28%), Positives = 136/270 (50%), Gaps = 4/270 (1%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P+ S    N +I  L  +G   +A+  L  M ++G      T S +L +C      
Sbjct: 122 FDEMPSRSLVSWNTMIGSLTQNGEENEALDLLLQMQREGTPFSEFTISSVLCACAAKCAL 181

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
              +L+H+   ++ ++ N  +  +L+ +Y+KCG + +A  +F+SM + R +V+WSSM + 
Sbjct: 182 SECQLLHAFAIKAAMDLNVFVATALLDVYAKCGLMKDAVCVFESMPD-RSVVTWSSMAAG 240

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YV       A+ +F +  E G   +++  S+VI AC+    +  G  +   L K G F S
Sbjct: 241 YVQNEMYEQALALFRKAWETGLKHDQFLMSSVICACAGLAAMIEGKQMNALLSKSG-FCS 299

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           ++ V  +LIDM+ K    +E +YKVF  + ++N V W  MI+  ++     + + LF  M
Sbjct: 300 NIFVASSLIDMYAKCG-GIEESYKVFRDVEKRNVVLWNAMISGLSRHARSLEVMILFEKM 358

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
              G  P+  T   V+SAC  + L   G++
Sbjct: 359 QQMGLSPNDVTFVSVLSACGHMGLVRKGQK 388



 Score = 75.1 bits (183), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/167 (26%), Positives = 86/167 (51%), Gaps = 3/167 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK +++LL++S    N  + +SLI +Y+KCG + E+ K+F+ +  KR++V W++MIS   
Sbjct: 285 GKQMNALLSKSGFCSNIFVASSLIDMYAKCGGIEESYKVFRDV-EKRNVVLWNAMISGLS 343

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              + ++ + +F +M ++G  PN+  F +V+ AC +   V  G   +  + K  +   +V
Sbjct: 344 RHARSLEVMILFEKMQQMGLSPNDVTFVSVLSACGHMGLVRKGQKYFDLMTKEHHLAPNV 403

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRCTQLG 262
                ++D   +     E AY +  K+    +   W  ++  C   G
Sbjct: 404 FHYSCMVDTLSRAGQIFE-AYDLISKLPFNASASMWGSLLASCRTHG 449


>gi|296089800|emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 236/607 (38%), Positives = 349/607 (57%), Gaps = 43/607 (7%)

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C  L+ F    ++ S  I TG   D      L+         G +D S ++FDR+ + N 
Sbjct: 39  CHNLKQFN---RILSQMILTGFISDTFAASRLLKFSTDSPFIG-LDYSLQIFDRIENSNG 94

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
             W  ++  Y+QS   +K A+ L+  M++  V P+++T+  V++AC   L     ++++ 
Sbjct: 95  FMWNTMMRAYIQSNSAEK-ALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFGGKEIHD 153

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES------------------------ 448
           H +K G   D  V N+LI+MYA  G M DARK F+                         
Sbjct: 154 HVLKVGFDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQ 213

Query: 449 ------LF----EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
                 LF    EK++VS++ ++  Y +N   E+A  +  E+   G+        S+LS 
Sbjct: 214 VMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSA 273

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS----RCANVEAAFQVFKEMEDRN 554
            + +  +  G+ IH  +I+ G ES   + NALI MYS    +C  VE A +VF  ME++ 
Sbjct: 274 CAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKCGCVENALEVFNGMEEKG 333

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           V SW ++I G A +G   R+L++F +M  +G+ PN IT++ VL AC H GL+ EG  HF 
Sbjct: 334 VSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFA 393

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM ++HGI   ++HY CMVDLLGR+G L EA + I SMP++ DV  W   LGAC+ HGDT
Sbjct: 394 SMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPMAPDVATWGALLGACKKHGDT 453

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
           E+G+     ++E  P     H+LLSN++AS G WE V  +R  MK++ ++K  GCS IEA
Sbjct: 454 EMGERVGRKLIELQPDHDGFHVLLSNIFASKGDWEDVLEVRGMMKQQGVVKTPGCSLIEA 513

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
           +  VH+F  G+ +HP   ++   L+++A ++K  GY PDTN V  +++EE+K   LF+HS
Sbjct: 514 NGVVHEFLAGDKTHPWINKVEGMLNEMAKRLKMEGYAPDTNEVSLDIDEEEKETTLFRHS 573

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           EK+A+AFGL++ S   PIR+ KNLR+C DCHTA K IS    REIV+RD +RFH+ K+G 
Sbjct: 574 EKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKEGA 633

Query: 855 CSCNDYW 861
           CSC DYW
Sbjct: 634 CSCMDYW 640



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 105/433 (24%), Positives = 196/433 (45%), Gaps = 44/433 (10%)

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           + L+ + ++FD++   N   W  M+    Q      A+ L+  M+ +   PD +T   VV
Sbjct: 77  IGLDYSLQIFDRIENSNGFMWNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVV 136

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC+   L   GK++H   ++ G   DV V  +L++MYA C   G++ D+RK+FD     
Sbjct: 137 QACAVRLLEFGGKEIHDHVLKVGFDSDVYVQNTLINMYAVC---GNMRDARKLFDESPVL 193

Query: 351 NVMSWTAIITGYVQSG--GRDKEAVKLFSDMIQGQVAP---------------------- 386
           + +SW +I+ GYV+ G  G+  EA KLF++M +  +                        
Sbjct: 194 DSVSWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFI 253

Query: 387 ---------NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA--- 434
                    +     SVL AC +L      + ++   ++ G      + N+LI MY+   
Sbjct: 254 EMNANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMY 313

Query: 435 -RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
            + G +E+A + F  + EK + S+N ++   A N   E++ ++  E+++ GV  +  TF 
Sbjct: 314 MKCGCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVERSLDMFSEMKNNGVIPNEITFM 373

Query: 494 SLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEME- 551
            +L     +G + +G    A +I K G E N   Y  ++ +  R   +  A ++ + M  
Sbjct: 374 GVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGCMVDLLGRAGLLNEAEKLIESMPM 433

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
             +V +W +++    KHG       +  K++   ++P+   +  +LS    +    E   
Sbjct: 434 APDVATWGALLGACKKHGDTEMGERVGRKLIE--LQPDHDGFHVLLSNIFASKGDWEDVL 491

Query: 612 HFRSMYDEHGIVQ 624
             R M  + G+V+
Sbjct: 492 EVRGMMKQQGVVK 504



 Score =  132 bits (332), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 188/386 (48%), Gaps = 53/386 (13%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+ + +IF  + N    + W++M+ +Y+       A+ ++  M++    P+ Y +  V++
Sbjct: 79  LDYSLQIFDRIENSNGFM-WNTMMRAYIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQ 137

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-----------------VKGSV 231
           AC+       G  I+  +LK G FDSDV V   LI+M+                 V  SV
Sbjct: 138 ACAVRLLEFGGKEIHDHVLKVG-FDSDVYVQNTLINMYAVCGNMRDARKLFDESPVLDSV 196

Query: 232 DLES----------------AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
              S                A+K+F++M EK+ V W+ +I+   Q G   +A+ +F++M 
Sbjct: 197 SWNSILAGYVKKGDMGQVMEAWKLFNEMDEKDMVSWSALISGYEQNGMYEEALVMFIEMN 256

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV----DMYAKC 331
            +G   D   +  V+SAC+ L +  +GK +H   IR G+   V +  +L+    DMY KC
Sbjct: 257 ANGMRLDEVVVVSVLSACAHLSIVKTGKMIHGLVIRMGIESYVNLQNALIHMYSDMYMKC 316

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G V+++ +VF+ M +  V SW A+I G   +G  ++ ++ +FS+M    V PN  TF
Sbjct: 317 ---GCVENALEVFNGMEEKGVSSWNALIIGLAVNGLVER-SLDMFSEMKNNGVIPNEITF 372

Query: 392 ASVLKACGN--LLDS---NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
             VL AC +  L+D    + A  +  H ++       C    ++ +  R+G + +A K  
Sbjct: 373 MGVLGACRHMGLVDEGRCHFASMIEKHGIEPNVKHYGC----MVDLLGRAGLLNEAEKLI 428

Query: 447 ESL-FEKNLVSYNTMVDAYAKNLNSE 471
           ES+    ++ ++  ++ A  K+ ++E
Sbjct: 429 ESMPMAPDVATWGALLGACKKHGDTE 454



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 187/384 (48%), Gaps = 51/384 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSC-IRSRNFHLGKLVHSLLTRSKLEP 111
           ++     +KA+    LM +    PD  TY L++++C +R   F  GK +H  + +   + 
Sbjct: 104 YIQSNSAEKALLLYKLMVKNNVGPDNYTYPLVVQACAVRLLEFG-GKEIHDHVLKVGFDS 162

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKS---------------------MG---------- 140
           +  + N+LI++Y+ CG++ +A K+F                       MG          
Sbjct: 163 DVYVQNTLINMYAVCGNMRDARKLFDESPVLDSVSWNSILAGYVKKGDMGQVMEAWKLFN 222

Query: 141 --NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
             +++D+VSWS++IS Y   G   +A+ MF+EM   G   +E    +V+ AC++   V  
Sbjct: 223 EMDEKDMVSWSALISGYEQNGMYEEALVMFIEMNANGMRLDEVVVVSVLSACAHLSIVKT 282

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALI----DMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           G +I+G +++ G  +S V +  ALI    DM++K    +E+A +VF+ M EK    W  +
Sbjct: 283 GKMIHGLVIRMG-IESYVNLQNALIHMYSDMYMKCGC-VENALEVFNGMEEKGVSSWNAL 340

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK-QLHSWAIRTG 313
           I      G    ++ +F +M  +G +P+  T  GV+ AC  + L   G+    S   + G
Sbjct: 341 IIGLAVNGLVERSLDMFSEMKNNGVIPNEITFMGVLGACRHMGLVDEGRCHFASMIEKHG 400

Query: 314 LALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKE 371
           +  +V   GC +VD+  +    G ++++ K+ + M +  +V +W A++ G  +  G  + 
Sbjct: 401 IEPNVKHYGC-MVDLLGRA---GLLNEAEKLIESMPMAPDVATWGALL-GACKKHGDTEM 455

Query: 372 AVKLFSDMIQGQVAPNHFTFASVL 395
             ++   +I+ Q  P+H  F  +L
Sbjct: 456 GERVGRKLIELQ--PDHDGFHVLL 477


>gi|297844988|ref|XP_002890375.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297336217|gb|EFH66634.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 760

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 231/693 (33%), Positives = 376/693 (54%), Gaps = 74/693 (10%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +   + +     ++ +I   T+      +I +F  M   G +PD   L  +   C+EL  
Sbjct: 72  ILQSIPDPTVYSFSSLIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSA 131

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM----------- 347
           F +GKQ+H  A  +GL +D  V  SL  MY +C   G + D+RKVFDRM           
Sbjct: 132 FKAGKQIHCVACVSGLDMDAFVQGSLFHMYMRC---GRMGDARKVFDRMSEKDVVTCSAL 188

Query: 348 ------------------------LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
                                   ++ N++SW  I++G+ +SG   KEAV +F  M    
Sbjct: 189 LCGYARKGCLEEVVRILSEMEKSGIEPNIVSWNGILSGFNRSG-YHKEAVIMFQKMHHLG 247

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
             P+  T +SVL + G+  + N+  Q++ + +K+G   D CV ++++ MY +SG +    
Sbjct: 248 FCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGII 307

Query: 444 KAF-----------------------------------ESLFEKNLVSYNTMVDAYAKNL 468
           K F                                   E   E N+VS+ +++   A+N 
Sbjct: 308 KLFDEFEMMETGVCNAYITGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNG 367

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
              +A EL  E++  GV  +  T  S+L    +I A+G G   H   ++     +  + +
Sbjct: 368 KDIEALELFREMQVAGVKPNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGS 427

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           ALI MY++C  ++ +  VF  M  +N++ W S++ G++ HG A   + IF  ++   +KP
Sbjct: 428 ALIDMYAKCGRIKMSQIVFNMMPTKNLVCWNSLMNGYSMHGKAKEVMSIFESLMRTRLKP 487

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + I++ ++LSAC   GL  EGWK+F  M +E+GI  R+EHY+CMV+LLGR+G L EA + 
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFNMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+ +P   D  VW   L +CR+  + +L + AA+ +   +P++P  ++L+SN+YA+ G W
Sbjct: 548 IKEIPFEPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMW 607

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             V +IR +M+   L K  GCSWI+  NKV+     + SHP+  +I  ++D+++ ++++ 
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNKVYTLLACDKSHPQIDQITEKMDEISEEMRKS 667

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           G+ P+ +F L ++EE+++ Q L+ HSEK+AV FGL++T    P++V KNLR+CGDCH  I
Sbjct: 668 GHRPNLDFALQDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVI 727

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K+IS   GREI +RD+NRFHH KDG CSC D+W
Sbjct: 728 KFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 153/620 (24%), Positives = 261/620 (42%), Gaps = 146/620 (23%)

Query: 50  LIYHLNDGRV-QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           LIY L   ++  ++I     M   G  PD      L K C     F  GK +H +   S 
Sbjct: 87  LIYALTKAKLFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSG 146

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR------------------------- 143
           L+ ++ +  SL  +Y +CG + +A K+F  M  K                          
Sbjct: 147 LDMDAFVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILS 206

Query: 144 ---------DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
                    +IVSW+ ++S +   G   +A+ MF +M  LGFCP++   S+V+ +  ++E
Sbjct: 207 EMEKSGIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSE 266

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-----VKGSVDL---------------- 233
           N+ +G  I+G+++K G    D CV  A++DM+     V G + L                
Sbjct: 267 NLNMGRQIHGYVIKQGLL-KDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYI 325

Query: 234 ---------ESAYKVF----DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
                    + A ++F    ++  E N V WT +I  C Q G   +A+ LF +M ++G  
Sbjct: 326 TGLSRNGLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P+R T+  ++ AC  +     G+  H +A+R  L  DV VG +L+DMYAKC   G +  S
Sbjct: 386 PNRVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDDVHVGSALIDMYAKC---GRIKMS 442

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           + VF+ M   N++ W +++ GY    G+ KE + +F  +++ ++ P+  +F S+L ACG 
Sbjct: 443 QIVFNMMPTKNLVCWNSLMNGYSMH-GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           +  ++   + +               N +   Y    R+E                Y+ M
Sbjct: 502 VGLTDEGWKYF---------------NMMSEEYGIKPRLE---------------HYSCM 531

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           V+   +    ++A++L+ EI                                       F
Sbjct: 532 VNLLGRAGKLQEAYDLIKEIP--------------------------------------F 553

Query: 521 ESNHCIYNALISMYSRCANV---EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           E + C++ AL++      NV   E A Q    +E  N  ++  M   +A  G       I
Sbjct: 554 EPDSCVWGALLNSCRLQNNVDLAEIAAQKLFHLEPENPGTYVLMSNIYAAKGMWTEVDSI 613

Query: 578 FYKMLADGIKPN-GITYIAV 596
             KM + G+K N G ++I V
Sbjct: 614 RNKMESLGLKKNPGCSWIQV 633



 Score =  133 bits (335), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 102/448 (22%), Positives = 192/448 (42%), Gaps = 88/448 (19%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q H+  +++G   D  +   L+  Y+        +D+  +   + D  V S++++I    
Sbjct: 36  QAHARILKSGAQNDGYISAKLIASYSNYNC---FNDADLILQSIPDPTVYSFSSLIYALT 92

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           ++     +++ +FS M    + P+     ++ K C  L      +Q++  A   G  +D 
Sbjct: 93  KAK-LFSQSIGVFSRMFSHGLIPDTHVLPNLFKVCAELSAFKAGKQIHCVACVSGLDMDA 151

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V  SL  MY R GRM DARK F+ + EK++V+ + ++  YA+    E+   +L E+E +
Sbjct: 152 FVQGSLFHMYMRCGRMGDARKVFDRMSEKDVVTCSALLCGYARKGCLEEVVRILSEMEKS 211

Query: 484 GVGTSAYTFASLLSG-----------------------------ASSIGAIGK------G 508
           G+  +  ++  +LSG                             +S + ++G       G
Sbjct: 212 GIEPNIVSWNGILSGFNRSGYHKEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMG 271

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME----------------- 551
            QIH  +IK G   + C+ +A++ MY +  +V    ++F E E                 
Sbjct: 272 RQIHGYVIKQGLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRN 331

Query: 552 ------------------DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
                             + NV+SWTS+I G A++G    ALE+F +M   G+KPN +T 
Sbjct: 332 GLVDKALEMFGLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTI 391

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY------ACMVDLLGRSGSLTEALE 647
            ++L AC +   +  G    RS    HG   R+         + ++D+  + G +  +  
Sbjct: 392 PSMLPACGNIAALGHG----RS---THGFAVRVHLLDDVHVGSALIDMYAKCGRIKMSQI 444

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTE 675
               MP + +++ W + +    +HG  +
Sbjct: 445 VFNMMP-TKNLVCWNSLMNGYSMHGKAK 471



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 72/290 (24%), Positives = 129/290 (44%), Gaps = 44/290 (15%)

Query: 48  NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS 107
           NR  YH      ++A+     M   G  PD  T S +L S   S N ++G+ +H  + + 
Sbjct: 228 NRSGYH------KEAVIMFQKMHHLGFCPDQVTVSSVLPSVGDSENLNMGRQIHGYVIKQ 281

Query: 108 KLEPNSVILNSLISLYSKCGDLN----------------------------------EAN 133
            L  +  ++++++ +Y K G +                                   E  
Sbjct: 282 GLLKDKCVISAMLDMYGKSGHVYGIIKLFDEFEMMETGVCNAYITGLSRNGLVDKALEMF 341

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
            +FK    + ++VSW+S+I+     GK ++A+ +F EM   G  PN     +++ AC N 
Sbjct: 342 GLFKEQKMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNRVTIPSMLPACGNI 401

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWT 252
             +  G   +GF ++    D DV VG ALIDM+ K G + +     VF+ M  KN V W 
Sbjct: 402 AALGHGRSTHGFAVRVHLLD-DVHVGSALIDMYAKCGRIKMSQI--VFNMMPTKNLVCWN 458

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
            ++   +  G  ++ + +F  ++ +   PD  + + ++SAC ++ L   G
Sbjct: 459 SLMNGYSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQVGLTDEG 508


>gi|357507741|ref|XP_003624159.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87162577|gb|ABD28372.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355499174|gb|AES80377.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 755

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/686 (35%), Positives = 383/686 (55%), Gaps = 49/686 (7%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL-GCPRDAIRLFLDMILSGFL 280
           L+ ++VK S +L+ A+K+FD++T KNT  WT++I+   +  G       LF +M   G  
Sbjct: 73  LLTLYVKSS-NLDHAHKLFDEITHKNTQTWTILISGFARAAGSSELVFSLFREMQADGAC 131

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT-------- 332
           P+++TLS V+  CS       GK +H+W +R G+  DV +  S++D+Y KC         
Sbjct: 132 PNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESF 191

Query: 333 --------------------VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
                                +G V+ S ++F    + +V+SW  II G +Q G      
Sbjct: 192 FELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYERLAL 251

Query: 373 VKLFSDMIQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
            +L+  +  G + +P  F+ A +L +  +L++  V  Q++   +  G   D  + +SL+ 
Sbjct: 252 EQLYCMVAHGTEFSPVTFSIALILVSSLSLVE--VGRQLHGRVLTFGLNSDGYIRSSLVE 309

Query: 432 MYARSGRMEDARKAFESLF----------------EKNLVSYNTMVDAYAKNLNSEKAFE 475
           MY + GRM+ A    + +                 +  +VS+++MV  Y  N   E   +
Sbjct: 310 MYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNGKYEDGMK 369

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
               +    +     T A+++S  ++ G +  G+QIHA I K G   +  + ++LI MYS
Sbjct: 370 TFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGSSLIDMYS 429

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +  +++ A  +F+++++ NV+ WTSMI+G A HG    A+ +F  ML  GI PN +T++ 
Sbjct: 430 KSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGIIPNEVTFVG 489

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VL+ACSH GLI EG ++FR M D + I   +EHY  MV+L GR+G L EA  FI    +S
Sbjct: 490 VLNACSHVGLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAKNFIFENSIS 549

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
               VWR+FL +CR+H +  +GK  +EM+L+  P DP A+ILLSN+ +S   W+  A +R
Sbjct: 550 HFTSVWRSFLSSCRLHKNFNMGKSVSEMLLQSAPSDPDAYILLSNMCSSNHQWDEAAIVR 609

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             M +R + K+ G SW++  +++H F VG+ SHP+  EIY+ LD L  ++KE GY  D  
Sbjct: 610 SLMYQRGVKKQPGQSWVQLKDQIHSFTVGDRSHPQDKEIYSYLDSLIGRLKEIGYSLDAK 669

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
            V+ ++EEEQ    +  HSEK+A+ F +I+TS   PIR+ KNLR+C DCH   KY S + 
Sbjct: 670 LVMQDVEEEQGEVLISHHSEKLALVFSIINTSPRTPIRIMKNLRICNDCHNFFKYASQLL 729

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            REI++RD++RFHH K   CSC +YW
Sbjct: 730 EREIIVRDTHRFHHFKQSSCSCGEYW 755



 Score =  173 bits (439), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 133/505 (26%), Positives = 244/505 (48%), Gaps = 63/505 (12%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH-MFVEMLELG 175
           N L++LY K  +L+ A+K+F  + +K +  +W+ +IS +       + +  +F EM   G
Sbjct: 71  NYLLTLYVKSSNLDHAHKLFDEITHK-NTQTWTILISGFARAAGSSELVFSLFREMQADG 129

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
            CPN+Y  S+V++ CS   N+  G  I+ ++L+ G    DV +  +++D+++K   + E 
Sbjct: 130 ACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNG-VGGDVVLENSILDLYLKCK-EFEY 187

Query: 236 AYKVFDKMTEKNTVGWTLMITR-------------------------------CTQLGCP 264
           A   F+ M EK+ V W +MI                                   Q G  
Sbjct: 188 AESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVSWNTIIDGLIQCGYE 247

Query: 265 RDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           R A+     M+  G  F P  F+++ ++   S L L   G+QLH   +  GL  D  +  
Sbjct: 248 RLALEQLYCMVAHGTEFSPVTFSIALIL--VSSLSLVEVGRQLHGRVLTFGLNSDGYIRS 305

Query: 323 SLVDMYAKCTVDGSVDDSRKV-------FDRMLDHNV---------MSWTAIITGYVQSG 366
           SLV+MY KC   G +D +  +       F R  +  V         +SW+++++GYV + 
Sbjct: 306 SLVEMYGKC---GRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWN- 361

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           G+ ++ +K F  M+   +  +  T A+++ AC N       +Q++ +  K G  +D  VG
Sbjct: 362 GKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVG 421

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           +SLI MY++SG ++DA   FE + E N+V + +M+   A +   ++A  L   + + G+ 
Sbjct: 422 SSLIDMYSKSGSLDDALMIFEQIKEPNVVLWTSMISGCALHGQGKEAISLFEGMLNLGII 481

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCAN-VEAA 543
            +  TF  +L+  S +G I +G + + R++K  +  N  +  Y +++++Y R  + +EA 
Sbjct: 482 PNEVTFVGVLNACSHVGLIEEGCR-YFRMMKDTYHINPEVEHYTSMVNLYGRAGHLIEAK 540

Query: 544 FQVFKEMEDRNVISWTSMITGFAKH 568
             +F+         W S ++    H
Sbjct: 541 NFIFENSISHFTSVWRSFLSSCRLH 565



 Score =  154 bits (390), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 222/458 (48%), Gaps = 62/458 (13%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC-- 126
           M   G  P+  T S +LK C R  N   GK +H+ + R+ +  + V+ NS++ LY KC  
Sbjct: 125 MQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLENSILDLYLKCKE 184

Query: 127 -----------------------------GDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
                                        GD+ ++ ++F++  NK D+VSW+++I   + 
Sbjct: 185 FEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNK-DVVSWNTIIDGLIQ 243

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G +  A+     M+  G   +   FS  +   S+   V +G  ++G +L  G  +SD  
Sbjct: 244 CGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVLTFG-LNSDGY 302

Query: 218 VGCALIDMFVK-GSVDLESA--------------YKVFDKMTEKNTVGWTLMITRCTQLG 262
           +  +L++M+ K G +D  S               + V  K  +   V W+ M++     G
Sbjct: 303 IRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKEPKARMVSWSSMVSGYVWNG 362

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              D ++ F  M+    + D  T++ ++SAC+   +   GKQ+H++  + GL +D  VG 
Sbjct: 363 KYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGKQIHAYIQKIGLRIDAYVGS 422

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           SL+DMY+K    GS+DD+  +F+++ + NV+ WT++I+G     G+ KEA+ LF  M+  
Sbjct: 423 SLIDMYSK---SGSLDDALMIFEQIKEPNVVLWTSMISGCALH-GQGKEAISLFEGMLNL 478

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQ--VYTHAVKRGRALDDCVGN--SLISMYARSGR 438
            + PN  TF  VL AC ++    + E+   Y   +K    ++  V +  S++++Y R+G 
Sbjct: 479 GIIPNEVTFVGVLNACSHV---GLIEEGCRYFRMMKDTYHINPEVEHYTSMVNLYGRAGH 535

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           + +A+     +FE ++  + ++  ++  +    K F +
Sbjct: 536 LIEAKNF---IFENSISHFTSVWRSFLSSCRLHKNFNM 570



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 90/317 (28%), Positives = 151/317 (47%), Gaps = 38/317 (11%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM-------GN------- 141
           +G+ +H  +    L  +  I +SL+ +Y KCG +++A+ I K +       GN       
Sbjct: 284 VGRQLHGRVLTFGLNSDGYIRSSLVEMYGKCGRMDKASTILKDVPLNFLRKGNFGVTCKE 343

Query: 142 -KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            K  +VSWSSM+S YV  GK  D +  F  M+      +    + +I AC+N   +  G 
Sbjct: 344 PKARMVSWSSMVSGYVWNGKYEDGMKTFRSMVCELIVVDIRTVATIISACANAGILEFGK 403

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            I+ ++ K G    D  VG +LIDM+ K S  L+ A  +F+++ E N V WT MI+ C  
Sbjct: 404 QIHAYIQKIG-LRIDAYVGSSLIDMYSK-SGSLDDALMIFEQIKEPNVVLWTSMISGCAL 461

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT-GLALDVC 319
            G  ++AI LF  M+  G +P+  T  GV++ACS + L   G +       T  +  +V 
Sbjct: 462 HGQGKEAISLFEGMLNLGIIPNEVTFVGVLNACSHVGLIEEGCRYFRMMKDTYHINPEVE 521

Query: 320 VGCSLVDMYAKCTVDGSVDDSRK-VFDRMLDHNVMSWTAIITG----------------Y 362
              S+V++Y +    G + +++  +F+  + H    W + ++                  
Sbjct: 522 HYTSMVNLYGRA---GHLIEAKNFIFENSISHFTSVWRSFLSSCRLHKNFNMGKSVSEML 578

Query: 363 VQSGGRDKEAVKLFSDM 379
           +QS   D +A  L S+M
Sbjct: 579 LQSAPSDPDAYILLSNM 595



 Score = 92.8 bits (229), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 64/282 (22%), Positives = 133/282 (47%), Gaps = 41/282 (14%)

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL- 468
           ++ H  K+G        N L+++Y +S  ++ A K F+ +  KN  ++  ++  +A+   
Sbjct: 54  LHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHKNTQTWTILISGFARAAG 113

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           +SE  F L  E++  G   + YT +S+L   S    I  G+ IHA I+++G   +  + N
Sbjct: 114 SSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFGKGIHAWILRNGVGGDVVLEN 173

Query: 529 ALISMYSRC-------------------------------ANVEAAFQVFKEMEDRNVIS 557
           +++ +Y +C                                +VE + ++F+   +++V+S
Sbjct: 174 SILDLYLKCKEFEYAESFFELMIEKDVVSWNIMIGAYLREGDVEKSLEMFRNFPNKDVVS 233

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSM 616
           W ++I G  + G+   ALE  Y M+A G + + +T+   L   S   L+  G + H R +
Sbjct: 234 WNTIIDGLIQCGYERLALEQLYCMVAHGTEFSPVTFSIALILVSSLSLVEVGRQLHGRVL 293

Query: 617 ---YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
               +  G ++     + +V++ G+ G + +A   ++ +PL+
Sbjct: 294 TFGLNSDGYIR-----SSLVEMYGKCGRMDKASTILKDVPLN 330



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 52/183 (28%), Positives = 84/183 (45%), Gaps = 3/183 (1%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S L   +SIG+      +H    K G        N L+++Y + +N++ A ++F E+  +
Sbjct: 37  SFLHSTTSIGSPPSLRALHGHYFKKGSLQILNSANYLLTLYVKSSNLDHAHKLFDEITHK 96

Query: 554 NVISWTSMITGFAK-HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           N  +WT +I+GFA+  G +     +F +M ADG  PN  T  +VL  CS    I  G K 
Sbjct: 97  NTQTWTILISGFARAAGSSELVFSLFREMQADGACPNQYTLSSVLKCCSRENNIQFG-KG 155

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
             +    +G+   +     ++DL  +      A  F   M +  DV+ W   +GA    G
Sbjct: 156 IHAWILRNGVGGDVVLENSILDLYLKCKEFEYAESFFELM-IEKDVVSWNIMIGAYLREG 214

Query: 673 DTE 675
           D E
Sbjct: 215 DVE 217


>gi|302799324|ref|XP_002981421.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
 gi|300150961|gb|EFJ17609.1| hypothetical protein SELMODRAFT_114363 [Selaginella moellendorffii]
          Length = 789

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 260/791 (32%), Positives = 437/791 (55%), Gaps = 20/791 (2%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +D++  L +    S +   G+ +H  +  S    +  + N L+ +Y++     +A  +  
Sbjct: 12  VDSWRDLARLVDESTSLEQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLD 71

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M  +R+ +SW+++I +    G    ++  F  ML+ G  P+   F ++I+A    +   
Sbjct: 72  RM-PRRNALSWNAVIRANAQAGDFPRSLLFFQRMLQDGSLPDAVVFLSLIKAPRTIQE-- 128

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G I+  F  K G FD    VG ALI M+ +    L+ A   FD++ E+  V W  +IT 
Sbjct: 129 -GEIVQEFAEKSG-FDRSFVVGTALIGMYGRCG-RLDRAKDAFDRIQERGVVSWNALITV 185

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLA 315
            ++      ++R+F +M+L G  P+  T+  + SA + +  ++ T G  +HS +I +GL 
Sbjct: 186 YSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHSCSIDSGLI 245

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
               V  S+++++ +    G++  +  +F++M   +V SW  +I+ + Q+G     A+ L
Sbjct: 246 SVTTVANSIINLFGR---GGNITRANDIFEKMDRRDVCSWNTMISAFAQNG-HSSGALDL 301

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           +  M    + P+  TF +VL+AC    D    E ++      G   D  V  +L+SMY R
Sbjct: 302 YGRMT---IRPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYRR 358

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR++ A + F ++    +++ N ++ A+A+   ++ +     ++   G+  S +T  ++
Sbjct: 359 CGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAV 418

Query: 496 LSGASSIGAIGKGEQIHARIIKS--GFESNH--CIYNALISMYSRCANVEAAFQVFKEME 551
           L   ++ GA     +   R +    G    H   + NAL++MY++C +++AA  +F    
Sbjct: 419 LGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAP 478

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
             NV +W +++ G+A+HG+A  A+ + Y+M   GI P+ I++ A LSA SHA  + +G +
Sbjct: 479 QGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGAR 538

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
            F ++  ++G++  +EHY  +VDLLGR+G L EA  F+RSM ++AD   W   LGACR+H
Sbjct: 539 IFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIH 598

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            D +    AAE I+  DP   A++ +LSN+Y++AG W+    IR+RM E    KE G SW
Sbjct: 599 KDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMSENGARKEPGRSW 658

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK-EFGYLPDTNFVLHELEEEQKVQYL 790
           IE  N+VH+F V + SHP+T EIY  LD+L + +K E  Y+PD   VLH++E+E +   L
Sbjct: 659 IEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLL 718

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
           + HSEK+A+ FGLI T +   I + KNLR+C DCH  +K  S  T REIV+RD  RFHH 
Sbjct: 719 WHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHF 778

Query: 851 KDGKCSCNDYW 861
             G CSC+D W
Sbjct: 779 NGGACSCSDCW 789



 Score = 90.1 bits (222), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 126/244 (51%), Gaps = 5/244 (2%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            LDL  +    PD  T+  +L++C    +   G+ +H  +     + + ++  +L+S+Y 
Sbjct: 298 ALDLYGRMTIRPDGVTFVNVLEACDCPDDLERGESIHRDVRAHGYDSDLIVATALVSMYR 357

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           +CG L+ A ++F ++ +   +++ +++I+++   G+   ++  F +ML+LG  P+++   
Sbjct: 358 RCGRLDRAAEVFAAIQHP-GVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLV 416

Query: 185 AVI-RACSNTENVAIGHIIYGFLLKC-GYFDS-DVCVGCALIDMFVKGSVDLESAYKVFD 241
           AV+    ++    + G  ++ ++ +C G  D  D+ V  AL++M+ K   DL++A  +FD
Sbjct: 417 AVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCG-DLDAARGIFD 475

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
              + N   W  ++    Q G    A+RL  +M L+G  PD  + +  +SA S       
Sbjct: 476 AAPQGNVSTWNAIMAGYAQHGYANMAVRLLYEMQLAGISPDPISFTAALSASSHARQVED 535

Query: 302 GKQL 305
           G ++
Sbjct: 536 GARI 539


>gi|297738895|emb|CBI28140.3| unnamed protein product [Vitis vinifera]
          Length = 580

 Score =  447 bits (1149), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 221/559 (39%), Positives = 349/559 (62%), Gaps = 36/559 (6%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           GS+  +R VF+++ +    +  +II GY       ++A+  +  M+   + P+ FTF S+
Sbjct: 26  GSLPYARLVFNQIPNPTTFTCNSIIRGYTNKN-LPRQAILFYQLMMLQGLDPDRFTFPSL 84

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
            K+CG L +    +Q++ H+ K G A D  + N+L++MY+  G +  ARK F+ +  K++
Sbjct: 85  FKSCGVLCE---GKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNKSV 141

Query: 455 VSYNTMVDAYAK------------------NL--------------NSEKAFELLHEIED 482
           VS+ TM+ AYA+                  NL              + E+A  L +E++ 
Sbjct: 142 VSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQL 201

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           +GV     T ASLL   + +GA+  G+ +H  I K   E +  +  AL+ MY++C ++E+
Sbjct: 202 SGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAKCGSIES 261

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A +VF+EM +++V++WT++I G A  G   +ALE+F++M    +KP+ IT++ VL+ACSH
Sbjct: 262 AMRVFQEMPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSH 321

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGL++EG  +F SM +++GI   +EHY CMVD+LGR+G + EA + I++MP++ D  V  
Sbjct: 322 AGLVNEGIAYFNSMPNKYGIQPSIEHYGCMVDMLGRAGRIAEAEDLIQNMPMAPDYFVLV 381

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             L ACR+HG+  + + AA+ ++E DP++   ++LLSN+Y+S  +WE    +R+ M ERN
Sbjct: 382 GLLSACRIHGNLVVAERAAQQLIELDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERN 441

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           + K  GCS IE    VH+F  G+ SHP++ EIY  LD +  ++K  GY+PD + VL +++
Sbjct: 442 IKKPPGCSAIEVGGVVHEFVKGDVSHPQSSEIYETLDDMMRRLKSAGYVPDKSEVLFDMD 501

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           E++K   L  HSEK+A+AFGL+ST+   PIRV KNLRVC DCH+A+K+IS V  REI++R
Sbjct: 502 EKEKENELSLHSEKLAIAFGLLSTTPGTPIRVVKNLRVCSDCHSAMKFISEVYNREIIVR 561

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D NRFHH   G CSC D+W
Sbjct: 562 DRNRFHHFTKGSCSCRDFW 580



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 172/382 (45%), Gaps = 47/382 (12%)

Query: 205 FLLKCGYFD----SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            L  C + D    S +   CAL D     S  L  A  VF+++    T     +I   T 
Sbjct: 1   MLRTCLFVDPFSASKIVAFCALHD-----SGSLPYARLVFNQIPNPTTFTCNSIIRGYTN 55

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
              PR AI  +  M+L G  PDRFT   +  +C  L     GKQLH  + + G A D  +
Sbjct: 56  KNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSCGVL---CEGKQLHCHSTKLGFASDAYI 112

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ---------------- 364
             +L++MY+ C   G +  +RKVFD+M++ +V+SW  +I  Y Q                
Sbjct: 113 QNTLMNMYSNC---GCLVSARKVFDKMVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEI 169

Query: 365 ---------------SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
                               +EA+ LF++M    V  +  T AS+L AC +L    + + 
Sbjct: 170 ASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTMASLLIACTHLGALELGKW 229

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++ +  K    +D  +G +L+ MYA+ G +E A + F+ + EK+++++  ++   A    
Sbjct: 230 LHVYIEKEKIEVDVALGTALVDMYAKCGSIESAMRVFQEMPEKDVMTWTALIVGLAMCGQ 289

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYN 528
             KA EL HE++ + V   A TF  +L+  S  G + +G    ++   K G + +   Y 
Sbjct: 290 GLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEGIAYFNSMPNKYGIQPSIEHYG 349

Query: 529 ALISMYSRCANVEAAFQVFKEM 550
            ++ M  R   +  A  + + M
Sbjct: 350 CMVDMLGRAGRIAEAEDLIQNM 371



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 127/467 (27%), Positives = 202/467 (43%), Gaps = 88/467 (18%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L  A  +F  + N     + +S+I  Y N+     AI  +  M+  G  P+ + F ++
Sbjct: 26  GSLPYARLVFNQIPNPTTF-TCNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSL 84

Query: 187 IRACSNTENVAIGHIIYGFLLKCGY----FDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            ++C        G +  G  L C      F SD  +   L++M+      L SA KVFDK
Sbjct: 85  FKSC--------GVLCEGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGC-LVSARKVFDK 135

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFL------------------------------ 272
           M  K+ V W  MI    Q   P +AI+LF                               
Sbjct: 136 MVNKSVVSWATMIGAYAQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSL 195

Query: 273 --DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
             +M LSG   D+ T++ ++ AC+ L     GK LH +  +  + +DV +G +LVDMYAK
Sbjct: 196 FNEMQLSGVKGDKVTMASLLIACTHLGALELGKWLHVYIEKEKIEVDVALGTALVDMYAK 255

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GS++ + +VF  M + +VM+WTA+I G     G+  +A++LF +M   +V P+  T
Sbjct: 256 C---GSIESAMRVFQEMPEKDVMTWTALIVGLAMC-GQGLKALELFHEMQMSEVKPDAIT 311

Query: 391 FASVLKACGNLLDSNVAEQVYTHA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           F  VL AC             +HA  V  G A      NS+ + Y               
Sbjct: 312 FVGVLAAC-------------SHAGLVNEGIAY----FNSMPNKYG-------------- 340

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
             + ++  Y  MVD   +     +A +L   I++  +    +    LLS     G +   
Sbjct: 341 -IQPSIEHYGCMVDMLGRAGRIAEAEDL---IQNMPMAPDYFVLVGLLSACRIHGNLVVA 396

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           E+   ++I+     N   Y  L ++YS   N EAA ++ + M +RN+
Sbjct: 397 ERAAQQLIELD-PKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442



 Score =  120 bits (300), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 125/460 (27%), Positives = 200/460 (43%), Gaps = 97/460 (21%)

Query: 37  IAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
           I  PTT     N +I  + N    ++AI    LM  +G  PD  T+  L KSC       
Sbjct: 38  IPNPTTFT--CNSIIRGYTNKNLPRQAILFYQLMMLQGLDPDRFTFPSLFKSC---GVLC 92

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
            GK +H   T+     ++ I N+L+++YS CG L  A K+F  M NK  +VSW++MI +Y
Sbjct: 93  EGKQLHCHSTKLGFASDAYIQNTLMNMYSNCGCLVSARKVFDKMVNK-SVVSWATMIGAY 151

Query: 156 --------------------------------VNRGKQVDAIHMFVEMLELGFCPNEYCF 183
                                           V      +A+ +F EM   G   ++   
Sbjct: 152 AQWDLPHEAIKLFRRMEIASNLFCWNIMINGHVEDSDYEEALSLFNEMQLSGVKGDKVTM 211

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDK 242
           ++++ AC++   + +G  ++ ++ K    + DV +G AL+DM+ K GS+  ESA +VF +
Sbjct: 212 ASLLIACTHLGALELGKWLHVYIEK-EKIEVDVALGTALVDMYAKCGSI--ESAMRVFQE 268

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M EK+ + WT +I      G    A+ LF +M +S   PD  T  GV++ACS   L   G
Sbjct: 269 MPEKDVMTWTALIVGLAMCGQGLKALELFHEMQMSEVKPDAITFVGVLAACSHAGLVNEG 328

Query: 303 -KQLHSWAIRTGLALDV-CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
               +S   + G+   +   GC +VDM  +                              
Sbjct: 329 IAYFNSMPNKYGIQPSIEHYGC-MVDMLGR------------------------------ 357

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKR 417
                 GR  EA  L  +M    +AP++F    +L AC   GNL+   VAE+     ++ 
Sbjct: 358 -----AGRIAEAEDLIQNM---PMAPDYFVLVGLLSACRIHGNLV---VAERAAQQLIE- 405

Query: 418 GRALDDCVGNSLI---SMYARSGRMEDARKAFESLFEKNL 454
              LD   G + +   ++Y+     E A+K  E + E+N+
Sbjct: 406 ---LDPKNGGTYVLLSNIYSSMKNWEAAKKMRELMVERNI 442


>gi|302821737|ref|XP_002992530.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
 gi|300139732|gb|EFJ06468.1| hypothetical protein SELMODRAFT_135370 [Selaginella moellendorffii]
          Length = 849

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 265/813 (32%), Positives = 436/813 (53%), Gaps = 27/813 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK-LEPN 112
           L+D  V++ + +L+   QK +  D   Y  LLK   ++ +    K + + ++ SK    +
Sbjct: 59  LSDEDVKQRLASLEEQNQKSDFVDPAAYVSLLK---QAGDVTALKTIQAHISHSKRFSGD 115

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++LN ++  Y KCG + +A  +F S+ +  ++ SW+ ++++Y   G     + +  +M 
Sbjct: 116 RLLLNCVVEAYGKCGCVKDARLVFSSIRHP-NVYSWTILLAAYAQNGHHKTVLELLRQMD 174

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            LG  PN    + VI A S   +      I+           DV +  ALIDM+ K   D
Sbjct: 175 LLGVWPNAVTLATVIGAVSELGDWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCG-D 233

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A  VFD+   K+      MI+   QLG   DA+  F  +  SG  P++ T + +  A
Sbjct: 234 IFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRA 293

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+   +++  +  H   I + L  DV V  +LV MY++C   GS++D+R+VFDRM   NV
Sbjct: 294 CATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRC---GSLEDARRVFDRMPGKNV 350

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W  +I GY Q G  D EA++L+  M    V P+  TF +VL++C           ++ 
Sbjct: 351 VTWNVMIAGYAQEGYTD-EALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNS 470
           H V  G      V ++LI+MY+  G + DA   F        +++S+  M+ A  +N   
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
             A  L  +++  GV  +  TF S +   SSIGA+ +G  I  R+I +G+  +  +  +L
Sbjct: 470 RSALALFRKMDLEGVKANVVTFVSTIDACSSIGALVEGHAIFERVIVTGYLIDVVLGTSL 529

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           I++Y +C  ++ A +VF  +  +N+++W +++   +++G    + E+  +M  DG +PN 
Sbjct: 530 INLYGKCGRLDYALEVFHHLSFKNIVTWNTILAASSQNGEETLSAELLQEMDLDGAQPNE 589

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T + +L  CSH GL+++   +FRSM   H +V   EHY C+VDLLGRSG L E   FI 
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFIS 649

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           S P S D ++W + LG+C +H D E G  AA  +L  DP++ + ++LLSN++A+ G  + 
Sbjct: 650 SKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDA 709

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V ++ K   ER + KE   S+IE +  VH+F V    H    +I A+L + + +++E G+
Sbjct: 710 VKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGF 769

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +P     LH++           H EK+A+AFG IS+    P+ V KNLR+C  CH  IK+
Sbjct: 770 VP-----LHDVRG--------YHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKH 816

Query: 831 ISMVTGREIVLRDSNRFHHIK--DGKCSCNDYW 861
           I  +TGR+I +R+ NR HH +  D  CSC DYW
Sbjct: 817 ICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849


>gi|6522552|emb|CAB61996.1| putative protein [Arabidopsis thaliana]
          Length = 1229

 Score =  446 bits (1148), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/631 (38%), Positives = 355/631 (56%), Gaps = 42/631 (6%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+ SA KVFD++ E+N +   +MI      G   + +++F  M      PD +T   V+ 
Sbjct: 89  DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS       G+++H  A + GL+  + VG  LV MY KC   G + ++R V D M   +
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKC---GFLSEARLVLDEMSRRD 205

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SW +++ GY Q+  R  +A+++  +M   +++ +  T AS+L A  N    NV     
Sbjct: 206 VVSWNSLVVGYAQNQ-RFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV----- 259

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
                               MY +          F  + +K+LVS+N M+  Y KN    
Sbjct: 260 --------------------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPV 291

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A EL   +E  G    A +  S+L       A+  G++IH  I +     N  + NALI
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY++C  +E A  VF+ M+ R+V+SWT+MI+ +   G    A+ +F K+   G+ P+ I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
            ++  L+ACSHAGL+ EG   F+ M D + I  R+EH ACMVDLLGR+G + EA  FI+ 
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           M +  +  VW   LGACRVH DT++G  AA+ + +  P+    ++LLSN+YA AG WE V
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
            NIR  MK + L K  G S +E +  +H F VG+ SHP++ EIY ELD L  K+KE GY+
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP-----IRVFKNLRVCGDCHT 826
           PD+   LH++EEE K  +L  HSEK+A+ F L++T + +      IR+ KNLR+CGDCH 
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A K IS +T REI++RD+NRFH  + G CSC
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSC 682



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 102/348 (29%), Positives = 170/348 (48%), Gaps = 44/348 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+G   + +     M      PD  T+  +LK+C  S    +G+ +H   T+  L   
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N L+S+Y KCG L+EA  +   M ++RD+VSW+S++  Y    +  DA+ +  EM 
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233

Query: 173 ELGFCPNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            +    +    ++++ A SNT  ENV                            M+VK  
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENV----------------------------MYVK-- 263

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                   +F KM +K+ V W +MI    +   P +A+ L+  M   GF PD  +++ V+
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC +    + GK++H +  R  L  ++ +  +L+DMYAKC   G ++ +R VF+ M   
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC---GCLEKARDVFENMKSR 373

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           +V+SWTA+I+ Y  S GR  +AV LFS +    + P+   F + L AC
Sbjct: 374 DVVSWTAMISAYGFS-GRGCDAVALFSKLQDSGLVPDSIAFVTTLAAC 420



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 25/313 (7%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G  L+  YA    +  ARK F+ + E+N++  N M+ +Y  N    +  ++   +    
Sbjct: 76  LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V    YTF  +L   S  G I  G +IH    K G  S   + N L+SMY +C  +  A 
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            V  EM  R+V+SW S++ G+A++     ALE+  +M +  I  +  T  ++L A S+  
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT- 254

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP---LSADVLVW 661
             +E   + + M+ + G  + +  +  M+ +  ++    EA+E    M       D +  
Sbjct: 255 -TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312

Query: 662 RTFLGAC----------RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
            + L AC          ++HG  E  K    ++LE           L ++YA  G  E  
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN---------ALIDMYAKCGCLEKA 363

Query: 712 ANIRKRMKERNLI 724
            ++ + MK R+++
Sbjct: 364 RDVFENMKSRDVV 376


>gi|297740626|emb|CBI30808.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 241/632 (38%), Positives = 352/632 (55%), Gaps = 45/632 (7%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DL  A K+FD+M E++ V WT MI    Q G    A  LF  M      P R        
Sbjct: 72  DLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKM------PFR-------- 117

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
                                    D+    S++  Y  C  +G V+D  ++F  M   N
Sbjct: 118 -------------------------DIAAWNSMI--YGYCC-NGRVEDGLRLFQEMPCRN 149

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQ 409
           V+SWT++I G  Q G R +EA+ LF  M+    +V P   T+  V+ AC N        Q
Sbjct: 150 VISWTSMIGGLDQHG-RSEEALGLFRQMMGCGVEVKPTSSTYCCVITACANASALYQGVQ 208

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++ H  K G + D  +  +LI+ YA   +MED+ + F      N+V +  +V  Y  N  
Sbjct: 209 IHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVFHGKLHMNVVIWTALVTGYGLNCK 268

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E A ++  E+   GV  +  +F S L+    + A+  G +IH   +K G E++  + N+
Sbjct: 269 HEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGREIHTAAVKLGLETDVFVGNS 328

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MY RC N+     +FK +  +N++SW S+I G A+HG    AL  F +M+   ++P+
Sbjct: 329 LIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGCGMWALAFFNQMVRSMVEPD 388

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            IT+  +LSACSH+G+  +G   F+   +      +++HYACMVD+LGRSG L EA E I
Sbjct: 389 EITFTGLLSACSHSGMSQKGRCLFKYFSENKSAEVKLDHYACMVDILGRSGKLEEAEELI 448

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           R+MP+ A+ +VW   L AC +H   E+ + AA+ I++ +P   +A++LLSNLYASA  W 
Sbjct: 449 RNMPVKANSMVWLVLLSACTMHSKLEVAERAAKCIIDLEPHCSSAYVLLSNLYASASRWS 508

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V+ IR+ MK+R + K+ G SWI      ++F  G+ SHP +  IY +L+ L  K+KE G
Sbjct: 509 DVSRIRREMKQRGITKQPGRSWITIKGWRNEFLSGDRSHPSSDRIYQKLEWLGGKLKELG 568

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+PD  F LH++E+EQK   L  HSE++A+ FGLIST +   I V KNLRVCGDCH+AIK
Sbjct: 569 YVPDQRFALHDVEDEQKEVMLSYHSERLAIGFGLISTVEGSTITVMKNLRVCGDCHSAIK 628

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            I+ +  R+I++RDS RFHH  DG+CSC DYW
Sbjct: 629 LIAKIVRRKIIVRDSTRFHHFMDGRCSCGDYW 660



 Score =  173 bits (438), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 140/526 (26%), Positives = 236/526 (44%), Gaps = 70/526 (13%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF-HLGKLVHSLLTRSKLEP 111
           HL + R+ +A    D    K + PD+  Y++++    R+  F H  +L + +  +  +  
Sbjct: 5   HLRNQRIDEARTVFD----KVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 60

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           NS+I          C DL  A K+F  M  +R +VSW++MI+ ++  GK   A  +F +M
Sbjct: 61  NSMIKGCF-----DCADLTMARKLFDEM-PERSVVSWTTMINGFLQFGKIEVAEGLFYKM 114

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
                                 +  A   +IYG+           C G            
Sbjct: 115 -------------------PFRDIAAWNSMIYGY----------CCNG------------ 133

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGV 289
            +E   ++F +M  +N + WT MI    Q G   +A+ LF  M+  G    P   T   V
Sbjct: 134 RVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKPTSSTYCCV 193

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC+       G Q+H+   + G + D  +  +L+  YA C     ++DS +VF   L 
Sbjct: 194 ITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCK---QMEDSLRVFHGKLH 250

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV+ WTA++TGY     + ++A+K+F +M++  V PN  +F S L +C  L   +   +
Sbjct: 251 MNVVIWTALVTGY-GLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSCCGLEALDWGRE 309

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++T AVK G   D  VGNSLI MY R G + D    F+ + +KN+VS+N+++   A++  
Sbjct: 310 IHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRISKKNIVSWNSVIVGCAQHGC 369

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--- 526
              A    +++  + V     TF  LLS  S  G   KG     R +   F  N      
Sbjct: 370 GMWALAFFNQMVRSMVEPDEITFTGLLSACSHSGMSQKG-----RCLFKYFSENKSAEVK 424

Query: 527 ---YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKH 568
              Y  ++ +  R   +E A ++ + M  + N + W  +++    H
Sbjct: 425 LDHYACMVDILGRSGKLEEAEELIRNMPVKANSMVWLVLLSACTMH 470



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 86/366 (23%), Positives = 180/366 (49%), Gaps = 38/366 (10%)

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +D++R VFD++   +V  +T +ITGY ++  R   A++LF +M    V     ++ S++K
Sbjct: 11  IDEARTVFDKVSFPDVYLYTMMITGYARN-YRFDHALQLFYEMPVKDVV----SWNSMIK 65

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRA---------------------------LDDCVGNSL 429
            C +  D  +A +++    +R                               D    NS+
Sbjct: 66  GCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSM 125

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT-- 487
           I  Y  +GR+ED  + F+ +  +N++S+ +M+    ++  SE+A  L  ++   GV    
Sbjct: 126 IYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQMMGCGVEVKP 185

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           ++ T+  +++  ++  A+ +G QIHA + K G+  +  I  ALI+ Y+ C  +E + +VF
Sbjct: 186 TSSTYCCVITACANASALYQGVQIHAHVFKLGYSFDAYISAALITFYANCKQMEDSLRVF 245

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
                 NV+ WT+++TG+  +     AL++F +M+ +G+ PN  ++ + L++C   GL +
Sbjct: 246 HGKLHMNVVIWTALVTGYGLNCKHEDALKVFGEMMREGVLPNQSSFTSALNSC--CGLEA 303

Query: 608 EGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             W +   +   + G+   +     ++ +  R G+L + +   + +    +++ W + + 
Sbjct: 304 LDWGREIHTAAVKLGLETDVFVGNSLIVMYYRCGNLNDGVVIFKRIS-KKNIVSWNSVIV 362

Query: 667 ACRVHG 672
            C  HG
Sbjct: 363 GCAQHG 368



 Score = 85.1 bits (209), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 33/210 (15%)

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT- 487
           +I+ + R+ R+++AR  F+ +   ++  Y  M+  YA+N   + A +L +E+    V + 
Sbjct: 1   MITDHLRNQRIDEARTVFDKVSFPDVYLYTMMITGYARNYRFDHALQLFYEMPVKDVVSW 60

Query: 488 --------------------------SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
                                     S  ++ ++++G    G I   E +  ++      
Sbjct: 61  NSMIKGCFDCADLTMARKLFDEMPERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIA 120

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           +    +N++I  Y     VE   ++F+EM  RNVISWTSMI G  +HG +  AL +F +M
Sbjct: 121 A----WNSMIYGYCCNGRVEDGLRLFQEMPCRNVISWTSMIGGLDQHGRSEEALGLFRQM 176

Query: 582 LADG--IKPNGITYIAVLSACSHAGLISEG 609
           +  G  +KP   TY  V++AC++A  + +G
Sbjct: 177 MGCGVEVKPTSSTYCCVITACANASALYQG 206



 Score = 45.1 bits (105), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 36/152 (23%), Positives = 68/152 (44%), Gaps = 14/152 (9%)

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           +Y  +I+ Y+R    + A Q+F EM  ++V+SW SMI G     F    L +  K+  + 
Sbjct: 28  LYTMMITGYARNYRFDHALQLFYEMPVKDVVSWNSMIKGC----FDCADLTMARKLFDEM 83

Query: 586 IKPNGITYIAVLSACSHAGLI--SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
            + + +++  +++     G I  +EG  +     D       +  Y C       +G + 
Sbjct: 84  PERSVVSWTTMINGFLQFGKIEVAEGLFYKMPFRDIAAWNSMIYGYCC-------NGRVE 136

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           + L   + MP   +V+ W + +G    HG +E
Sbjct: 137 DGLRLFQEMPCR-NVISWTSMIGGLDQHGRSE 167


>gi|302773067|ref|XP_002969951.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
 gi|300162462|gb|EFJ29075.1| hypothetical protein SELMODRAFT_92231 [Selaginella moellendorffii]
          Length = 789

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 260/791 (32%), Positives = 439/791 (55%), Gaps = 20/791 (2%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           +D++  L +    S +   G+ +H  +  S    +  + N L+ +Y++     +A  +  
Sbjct: 12  VDSWRDLARLVDESTSLDQGRKIHRRVIESGYGDHLFLSNHLLHMYARLESSRDAELLLD 71

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M  +R+ VSW+++I +    G    ++  F  ML+ G  P+   F ++I+A    +   
Sbjct: 72  RM-PRRNAVSWNAVIRANAQAGDFPRSLLFFQRMLQDGSVPDAVVFLSLIKAPGTIQE-- 128

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G I+  F  K G FD    VG ALI M+ +    L+ A   FD++ E+  V W  +IT 
Sbjct: 129 -GEIVQDFAKKSG-FDRSFVVGTALIGMYGRCG-RLDRAKDAFDRIQERGVVSWNALITV 185

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLA 315
            ++      ++R+F +M+L G  P+  T+  + SA + +  ++ T G  +H+ +I +GL 
Sbjct: 186 YSRGDEKEQSLRVFREMLLQGIAPNAVTIICIASAVAGIAAKITTCGNLIHACSIDSGLI 245

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
               V  S+++++ +    G++  + ++F+++   +V SW  +I  + ++G    EA+ L
Sbjct: 246 SVTTVANSIINLFGR---GGNISRANEIFEKVDQRDVCSWNTMIAAFAKNG-HVFEALDL 301

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           +  M    + P+  TF +VL+AC    D    E ++  A   G   D  V  +L+SMY R
Sbjct: 302 YGRMT---IRPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYRR 358

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR++ A + F ++    +++ N ++ A+A+   ++ +     ++   G+  S +T  ++
Sbjct: 359 CGRLDRAAEVFAAIQHPGVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLVAV 418

Query: 496 LSGASSIGAIGKGEQIHARIIKS--GFESNH--CIYNALISMYSRCANVEAAFQVFKEME 551
           L   ++ GA     +   R +    G    H   + NAL++MY++C +++AA  +F    
Sbjct: 419 LGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCGDLDAARGIFDAAP 478

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
             NV +W +++ G+A+HG+A  A+ + Y+M   GI P+ I++ A LSA SHA  + +G +
Sbjct: 479 QGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVEDGAR 538

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
            F ++  ++G++  +EHY  +VDLLGR+G L EA  F+RSM ++AD   W   LGACR+H
Sbjct: 539 IFYAISRDYGLIPSVEHYGAVVDLLGRAGWLEEAEGFLRSMAIAADAAAWMALLGACRIH 598

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            D +    AAE I+  DP   A++ +LSN+Y++AG W+    IR+RM E    KE G SW
Sbjct: 599 KDQDRAMRAAEAIVAIDPSHGASYTVLSNVYSAAGRWDEAEEIRRRMGENGARKEPGRSW 658

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK-EFGYLPDTNFVLHELEEEQKVQYL 790
           IE  N+VH+F V + SHP+T EIY  LD+L + +K E  Y+PD   VLH++E+E +   L
Sbjct: 659 IEVKNRVHEFAVKDRSHPRTGEIYERLDELRVVLKSEEDYVPDVGSVLHDVEDEHRENLL 718

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
           + HSEK+A+ FGLI T +   I + KNLR+C DCH  +K  S  T REIV+RD  RFHH 
Sbjct: 719 WHHSEKLALGFGLIGTKEGSKITIIKNLRICEDCHVVMKLTSKNTKREIVVRDCYRFHHF 778

Query: 851 KDGKCSCNDYW 861
             G CSC+D W
Sbjct: 779 NGGACSCSDCW 789



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 59/244 (24%), Positives = 125/244 (51%), Gaps = 5/244 (2%)

Query: 65  TLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
            LDL  +    PD  T+  +L++C    +   G+ +H        + + ++  +L+S+Y 
Sbjct: 298 ALDLYGRMTIRPDGVTFVNVLEACDCPDDLERGESIHRDARAHGYDSDLIVATALVSMYR 357

Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
           +CG L+ A ++F ++ +   +++ +++I+++   G+   ++  F +ML+LG  P+++   
Sbjct: 358 RCGRLDRAAEVFAAIQHP-GVITLNAIIAAHAQFGRADGSLLHFRQMLQLGIRPSKFTLV 416

Query: 185 AVI-RACSNTENVAIGHIIYGFLLKC-GYFDS-DVCVGCALIDMFVKGSVDLESAYKVFD 241
           AV+    ++    + G  ++ ++ +C G  D  D+ V  AL++M+ K   DL++A  +FD
Sbjct: 417 AVLGACATSGAAASAGRDLHRWMAECPGDCDPHDILVRNALVNMYAKCG-DLDAARGIFD 475

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
              + N   W  ++    Q G    A+RL  +M L+G  PD  + +  +SA S       
Sbjct: 476 AAPQGNVSTWNAIMAGYAQHGYADMAVRLLYEMQLAGISPDPISFTAALSASSHARQVED 535

Query: 302 GKQL 305
           G ++
Sbjct: 536 GARI 539


>gi|414591609|tpg|DAA42180.1| TPA: hypothetical protein ZEAMMB73_073969 [Zea mays]
          Length = 696

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 246/618 (39%), Positives = 357/618 (57%), Gaps = 7/618 (1%)

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL-SGVVSACSELELFTSGKQL 305
             V +T  I+   Q   P  A+  F  M+  G  P+ FT  S   +A S      +G QL
Sbjct: 83  TVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASAPPRSAAGTQL 142

Query: 306 HSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           H+ A+R G L  D  V C+ +DMY K    G +  +R++FD M + NV++W A++T  V 
Sbjct: 143 HALALRFGYLPDDAFVSCAALDMYFK---TGCLALARRLFDEMPNRNVVAWNAVMTNAVL 199

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
            G R  E V+ +  +      PN  +  +   AC  + + ++ EQ Y    K G   D  
Sbjct: 200 DG-RPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCGFGKDVS 258

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           V NS++  Y +   +  AR  F+ +  +N VS+ +MV AYA+N   E+AF +       G
Sbjct: 259 VSNSVVDFYGKCRCVGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGARRAG 318

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
              + +  +S+L+  + +  +  G  +HA  ++S  +SN  + +AL+ MY +C  +E A 
Sbjct: 319 EEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKCGGIEDAE 378

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM-LADGIKPNGITYIAVLSACSHA 603
           QVF EM  RN+++W +MI G+A  G A  AL +F KM +     PN IT + VL+ACS  
Sbjct: 379 QVFFEMPQRNLVTWNAMIGGYAHIGDAHNALSVFDKMIMGQETAPNYITLVNVLTACSRG 438

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           GL  EG++ F++M    GI  R+EHYAC+VDLL R+G    A + I+ MP+   + VW  
Sbjct: 439 GLTKEGYELFQTMKWRFGIEPRIEHYACVVDLLCRAGMEERAYKIIQGMPMRPSISVWGA 498

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            LG C++HG TELG+ AAE + E DPQD   H+LLSN+ ASAG W    ++RK MK   +
Sbjct: 499 LLGGCKMHGKTELGRIAAEKLFELDPQDSGNHVLLSNMLASAGRWAEATDVRKEMKNVGI 558

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            K+ G SWI   N VH F   +T+H    EI A L +L  +++  GY+PDT + L++LEE
Sbjct: 559 KKDPGRSWITWKNVVHVFQAKDTTHDMNREIQALLAKLKGQMQAAGYMPDTQYALYDLEE 618

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
           E+K   +FQHSEK+A+AFGLI      PIR+ KNLR+C DCH A K+IS + GREI++RD
Sbjct: 619 EEKESEVFQHSEKLALAFGLICIPPGIPIRIMKNLRICVDCHRAFKFISGIAGREIIVRD 678

Query: 844 SNRFHHIKDGKCSCNDYW 861
           +N FHH K+ +CSC DYW
Sbjct: 679 NNMFHHFKNYECSCKDYW 696



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/486 (25%), Positives = 225/486 (46%), Gaps = 65/486 (13%)

Query: 97  GKLVHSLLTRSKLEPNSVILN-SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           G  +H+L  R    P+   ++ + + +Y K G L  A ++F  M N R++V+W++++++ 
Sbjct: 139 GTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMPN-RNVVAWNAVMTNA 197

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           V  G+ ++ +  +  +   G  PN     A   AC+   N+++G   YGF+ KCG F  D
Sbjct: 198 VLDGRPLETVEAYFGLRGAGGMPNVVSVCAFFNACAGMTNLSLGEQFYGFVAKCG-FGKD 256

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           V V  +++D + K    +  A  VFD M  +N V W  M+    Q G   +A  ++L   
Sbjct: 257 VSVSNSVVDFYGKCRC-VGKARAVFDGMGVRNNVSWCSMVVAYAQNGAEEEAFFVYLGAR 315

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
            +G  P  F +S V++ C+ L     G+ LH+ A+R+ +  ++ V  +LVDMY KC   G
Sbjct: 316 RAGEEPTDFMVSSVLTTCAGLLGLDLGRALHAVAVRSCIDSNIFVASALVDMYGKC---G 372

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASV 394
            ++D+ +VF  M   N+++W A+I GY    G    A+ +F  MI GQ  APN+ T  +V
Sbjct: 373 GIEDAEQVFFEMPQRNLVTWNAMIGGYAHI-GDAHNALSVFDKMIMGQETAPNYITLVNV 431

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL----- 449
           L AC                                   +R G  ++  + F+++     
Sbjct: 432 LTAC-----------------------------------SRGGLTKEGYELFQTMKWRFG 456

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
            E  +  Y  +VD   +    E+A+++   I+   +  S   + +LL G    G    G 
Sbjct: 457 IEPRIEHYACVVDLLCRAGMEERAYKI---IQGMPMRPSISVWGALLGGCKMHGKTELGR 513

Query: 510 QIHARIIKSGFE--SNHCIYNALISMYSRCANVEAAFQVFKEMED--------RNVISWT 559
               ++ +   +   NH + + +++   R A    A  V KEM++        R+ I+W 
Sbjct: 514 IAAEKLFELDPQDSGNHVLLSNMLASAGRWAE---ATDVRKEMKNVGIKKDPGRSWITWK 570

Query: 560 SMITGF 565
           +++  F
Sbjct: 571 NVVHVF 576



 Score = 40.4 bits (93), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 77/183 (42%), Gaps = 11/183 (6%)

Query: 491 TFASLLSGASSIGAIGK----GEQIHAR---IIKSGFESNHCIYNALISMYSRCANVEAA 543
           T A LL+GA       +    G   HAR   ++        C +  L+++YS+     AA
Sbjct: 15  TDAQLLAGAVEAAIATRSARLGRAAHARALRLLSPALPPFLCAH--LVNLYSKLDLPGAA 72

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
                      V+S+T+ I+G A+H    +AL  F  ML  G++PN  T+ +   A + A
Sbjct: 73  AASLAADPSPTVVSYTAFISGAAQHARPLQALSAFAAMLRLGLRPNDFTFPSAFKAAASA 132

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
              S       ++    G +      +C  +D+  ++G L  A      MP + +V+ W 
Sbjct: 133 PPRSAAGTQLHALALRFGYLPDDAFVSCAALDMYFKTGCLALARRLFDEMP-NRNVVAWN 191

Query: 663 TFL 665
             +
Sbjct: 192 AVM 194


>gi|357141866|ref|XP_003572374.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Brachypodium distachyon]
          Length = 642

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 233/601 (38%), Positives = 347/601 (57%), Gaps = 14/601 (2%)

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH------SWAIRTGLALDVCV 320
           A+ L  D+  +G   D  +L  ++  C        G+ +H      +          + V
Sbjct: 50  ALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGATHGSLFV 109

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             SLV MYAK    G +DD+ ++F  M   NV+SWT ++     + GR KEA++   +M 
Sbjct: 110 SNSLVSMYAKF---GMLDDALELFGGMPQRNVVSWTTVVAALANAPGRKKEALRFLVEMR 166

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +  VA N +TF+SVL ACG      V   ++   +K G   D  V +SLI  Y + G ++
Sbjct: 167 RDGVAANSYTFSSVLGACGT---PGVLAAMHADIIKVGLDSDVFVRSSLIDAYMKLGDLD 223

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
             R  F+ +   +LV +N+++  +A++ +   A EL   ++++G   +  T  S+L   +
Sbjct: 224 SGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTSVLRACT 283

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            +  +  G Q+HA ++K  ++ +  ++NAL+ MY +C  +  A  +F  M DR+VISW++
Sbjct: 284 GMVMLEVGRQVHAHVLK--YDRDLILHNALLDMYCKCGCLLDADALFSRMHDRDVISWST 341

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI+G A++G +  AL++F  M A+G  PN IT + VL ACSHAGL+ +GW +FRSM    
Sbjct: 342 MISGLAQNGRSVEALKVFDLMKAEGPTPNNITMVGVLFACSHAGLVEDGWHYFRSMDKLF 401

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI    EH  CMVDLLGR+G L EA++FI  M    D ++WRT LGACR+H +  L  +A
Sbjct: 402 GIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRTLLGACRMHKNATLASYA 461

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A  IL+ +P+D  A ILLSN+YA    W       K M+++ + KE G SWIE    VH 
Sbjct: 462 ATEILKLEPEDQGARILLSNIYADLRQWSNAEKSWKTMRDQGVKKEPGRSWIELGKLVHV 521

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F  GE SHP +  I  EL++L  + K+ GY+P T FVL +L  EQK   L  HSEK+A+A
Sbjct: 522 FIAGELSHPCSDRIVQELNRLIRRAKDLGYVPQTEFVLQDLGTEQKEDLLKYHSEKLAIA 581

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FG +++ + KP+R+ KNLR+CGDCH   K +S   G+ I++RD  RFHH + G CSC DY
Sbjct: 582 FGTMNSMEGKPVRIMKNLRICGDCHAFAKLVSKTEGKAIIIRDPVRFHHFQHGVCSCGDY 641

Query: 861 W 861
           W
Sbjct: 642 W 642



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 234/450 (52%), Gaps = 40/450 (8%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT------RSKL 109
           DG    A+  L  +   G   D  +   L+K C+R      G+ +H  ++          
Sbjct: 44  DGPFTAALALLPDIAAAGVRADPVSLCRLIKLCVRHGTVGDGRAIHRHVSLCAHGGGGAT 103

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR-GKQVDAIHMF 168
             +  + NSL+S+Y+K G L++A ++F  M  +R++VSW++++++  N  G++ +A+   
Sbjct: 104 HGSLFVSNSLVSMYAKFGMLDDALELFGGM-PQRNVVSWTTVVAALANAPGRKKEALRFL 162

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           VEM   G   N Y FS+V+ AC     +A  H     ++K G  DSDV V  +LID ++K
Sbjct: 163 VEMRRDGVAANSYTFSSVLGACGTPGVLAAMH---ADIIKVG-LDSDVFVRSSLIDAYMK 218

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
              DL+S   VFD+M   + V W  +I    Q G    A+ LF+ M  SGFL ++ TL+ 
Sbjct: 219 LG-DLDSGRGVFDEMVTCDLVVWNSIIAGFAQSGDGVGAMELFMRMKESGFLANQGTLTS 277

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+ AC+ + +   G+Q+H+  ++     D+ +  +L+DMY KC   G + D+  +F RM 
Sbjct: 278 VLRACTGMVMLEVGRQVHAHVLKYD--RDLILHNALLDMYCKC---GCLLDADALFSRMH 332

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           D +V+SW+ +I+G  Q+ GR  EA+K+F  M      PN+ T   VL AC +   + + E
Sbjct: 333 DRDVISWSTMISGLAQN-GRSVEALKVFDLMKAEGPTPNNITMVGVLFACSH---AGLVE 388

Query: 409 QVYTHAVKRGRALDDCVG--------NSLISMYARSGRMEDARKAF-ESLFEKNLVSYNT 459
             + +     R++D   G        N ++ +  R+G++++A K   E  FE + V + T
Sbjct: 389 DGWHYF----RSMDKLFGIQPEREHCNCMVDLLGRAGKLDEAMKFIGEMKFEPDSVIWRT 444

Query: 460 MVDA--YAKN--LNSEKAFELLH-EIEDTG 484
           ++ A    KN  L S  A E+L  E ED G
Sbjct: 445 LLGACRMHKNATLASYAATEILKLEPEDQG 474


>gi|225460265|ref|XP_002278647.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Vitis vinifera]
          Length = 610

 Score =  446 bits (1147), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 232/607 (38%), Positives = 360/607 (59%), Gaps = 41/607 (6%)

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCS--LVDMYAKCTVDGSVDDSRKVFDRM 347
           + AC+  +    GK+LH   I+TG+  D C   S  L++MY KC   G + D+  +F+++
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGI--DQCKSLSNNLINMYGKC---GLIQDALNLFNQL 64

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNV 406
              + +SW +I+T   Q+       + +F  M  Q  + P+H+ FA ++KAC  L     
Sbjct: 65  PHRDPISWASILTANNQAN-LPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQ 123

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA- 465
            +QV+   +    + DD V +SL+ MYA+ G  +  R  F+S+  KN +S+  M+  YA 
Sbjct: 124 GKQVHATFIVSPVSDDDVVKSSLVDMYAKCGLPDIGRVVFDSISSKNSISWTAMISGYAQ 183

Query: 466 ----------------KNLNSEKA--------------FELLHEIEDTGVG-TSAYTFAS 494
                           KNL S  A              F L  E+   G+     +  +S
Sbjct: 184 SGRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSS 243

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           ++  ++++  +G G+QIH  +I  G+ES+  + NAL+ MY++C++V AA ++F  M  R+
Sbjct: 244 IIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKIFGRMVQRD 303

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
           ++SWTS+I G A+HG A  AL ++ +ML+ G+KPN +T++ ++ ACSH GL+S+G   F 
Sbjct: 304 IVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYFFN 363

Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
           SM  ++GI   ++HY C++DLL RSG L EA   I++MP   D   W   L AC  H +T
Sbjct: 364 SMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSACNHHRNT 423

Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
            +G   A+ +L   P+DP+ +ILLSN+YASA  WE V+ +R+ M    + KE G S I  
Sbjct: 424 LIGIRVADHLLSLKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAMEVKKEPGYSCIVL 483

Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
             +   F  GETSHP   EI+  L++L  ++K+ GY+PDT+ VLH+LE+++K + LF HS
Sbjct: 484 GKESQVFLAGETSHPAKEEIFGLLEELDAEMKKRGYIPDTSSVLHDLEQQEKERQLFWHS 543

Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
           E++AVA+GL+       + + KNLRVCGDCHT +K+IS++  REIV+RD+NR+HH KDGK
Sbjct: 544 ERLAVAYGLLKGIPGMVLHIVKNLRVCGDCHTVLKFISIIVKREIVVRDANRYHHFKDGK 603

Query: 855 CSCNDYW 861
           CSCN++W
Sbjct: 604 CSCNNFW 610



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 212/427 (49%), Gaps = 54/427 (12%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L++C R ++  +GK +H  + ++ ++    + N+LI++Y KCG + +A  +F  + + RD
Sbjct: 10  LQACARHQSPPIGKKLHCHIIKTGIDQCKSLSNNLINMYGKCGLIQDALNLFNQLPH-RD 68

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +SW+S++++          + MF  M +  G  P+ Y F+ +++AC+    +  G  ++
Sbjct: 69  PISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILGAMKQGKQVH 128

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
              +     D DV V  +L+DM+ K G  D+     VFD ++ KN++ WT MI+   Q G
Sbjct: 129 ATFIVSPVSDDDV-VKSSLVDMYAKCGLPDIGRV--VFDSISSKNSISWTAMISGYAQSG 185

Query: 263 CPRDAIRLFLDM----------ILSGFLP----------------------DRFTLSGVV 290
              DAI+LF  M          ++SG +                       D F LS ++
Sbjct: 186 RKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDIVDPFILSSII 245

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            A + L +   GKQ+H   I  G    + V  +LVDMYAKC+    V  ++K+F RM+  
Sbjct: 246 GASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCS---DVLAAKKIFGRMVQR 302

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +++SWT+II G  Q  G  +EA+ L++ M+   + PN  TF  ++ AC ++   +     
Sbjct: 303 DIVSWTSIIVGTAQH-GLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLVSKGRYF 361

Query: 411 YTHAVKRGRALDDCVGNS------LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           +   +K     D  +  S      L+ + +RSG +E+A    +++ F+ +  ++  ++ A
Sbjct: 362 FNSMIK-----DYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLSA 416

Query: 464 YAKNLNS 470
              + N+
Sbjct: 417 CNHHRNT 423



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 128/504 (25%), Positives = 236/504 (46%), Gaps = 49/504 (9%)

Query: 182 CFSAVI---RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           C+S ++   +AC+  ++  IG  ++  ++K G  D    +   LI+M+ K  + ++ A  
Sbjct: 2   CYSHLVYQLQACARHQSPPIGKKLHCHIIKTG-IDQCKSLSNNLINMYGKCGL-IQDALN 59

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELE 297
           +F+++  ++ + W  ++T   Q   P   + +F  M    G  PD +  + +V AC+ L 
Sbjct: 60  LFNQLPHRDPISWASILTANNQANLPHLTLSMFPAMFKQDGLQPDHYVFACLVKACAILG 119

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
               GKQ+H+  I + ++ D  V  SLVDMYAKC   G  D  R VFD +   N +SWTA
Sbjct: 120 AMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKC---GLPDIGRVVFDSISSKNSISWTA 176

Query: 358 IITGYVQSGGRDKEAVKLFSDM-----------IQGQVAPNH------------------ 388
           +I+GY QS GR  +A++LF  M           I G V   +                  
Sbjct: 177 MISGYAQS-GRKLDAIQLFQKMPVKNLLSWTALISGLVQSGNWVDSFYLFMEMRSKGIDI 235

Query: 389 ---FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
              F  +S++ A  NL    + +Q++   +  G      V N+L+ MYA+   +  A+K 
Sbjct: 236 VDPFILSSIIGASANLAVLGLGKQIHCLVILLGYESSLFVSNALVDMYAKCSDVLAAKKI 295

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  + ++++VS+ +++   A++  +E+A  L + +  TG+  +  TF  L+   S +G +
Sbjct: 296 FGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRMLSTGLKPNEVTFVGLIYACSHVGLV 355

Query: 506 GKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMIT 563
            KG      +IK  G   +   Y  L+ + SR  ++E A  + K M  + +  +W ++++
Sbjct: 356 SKGRYFFNSMIKDYGINPSLQHYTCLLDLLSRSGHLEEAENLIKAMPFKPDEATWAALLS 415

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
               H      + +   +L+  +KP   +   +LS    +  + E     R +      V
Sbjct: 416 ACNHHRNTLIGIRVADHLLS--LKPEDPSTYILLSNIYASAAMWESVSKVRRLMAAME-V 472

Query: 624 QRMEHYACMVDLLGRSGSLTEALE 647
           ++   Y+C+V  LG+   +  A E
Sbjct: 473 KKEPGYSCIV--LGKESQVFLAGE 494



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 85/332 (25%), Positives = 159/332 (47%), Gaps = 48/332 (14%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +  Q G  PD   ++ L+K+C        GK VH+    S +  + V+ +SL+ +Y+KCG
Sbjct: 95  MFKQDGLQPDHYVFACLVKACAILGAMKQGKQVHATFIVSPVSDDDVVKSSLVDMYAKCG 154

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI---------------------- 165
             +    +F S+ +K  I SW++MIS Y   G+++DAI                      
Sbjct: 155 LPDIGRVVFDSISSKNSI-SWTAMISGYAQSGRKLDAIQLFQKMPVKNLLSWTALISGLV 213

Query: 166 ---------HMFVEMLELGF-CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
                    ++F+EM   G    + +  S++I A +N   + +G  I+  ++  GY +S 
Sbjct: 214 QSGNWVDSFYLFMEMRSKGIDIVDPFILSSIIGASANLAVLGLGKQIHCLVILLGY-ESS 272

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           + V  AL+DM+ K S D+ +A K+F +M +++ V WT +I    Q G   +A+ L+  M+
Sbjct: 273 LFVSNALVDMYAKCS-DVLAAKKIFGRMVQRDIVSWTSIIVGTAQHGLAEEALSLYNRML 331

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGK-----QLHSWAIRTGLALDVCVGCSLVDMYAK 330
            +G  P+  T  G++ ACS + L + G+      +  + I   L    C    L+D+ ++
Sbjct: 332 STGLKPNEVTFVGLIYACSHVGLVSKGRYFFNSMIKDYGINPSLQHYTC----LLDLLSR 387

Query: 331 CTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG 361
               G ++++  +   M    +  +W A+++ 
Sbjct: 388 ---SGHLEEAENLIKAMPFKPDEATWAALLSA 416


>gi|10092182|gb|AAG12601.1|AC068900_7 hypothetical protein; 7123-4412 [Arabidopsis thaliana]
          Length = 861

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/761 (33%), Positives = 435/761 (57%), Gaps = 37/761 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +G   K+I     M ++G   D  T++++LK C    +  LG  +H ++ R   + +
Sbjct: 113 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 172

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V  ++L+ +Y+K     E+ ++F+ +  K   VSWS++I+  V       A+  F EM 
Sbjct: 173 VVAASALLDMYAKGKRFVESLRVFQGIPEKNS-VSWSAIIAGCVQNNLLSLALKFFKEMQ 231

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           ++    ++  +++V+R+C+    + +G  ++   LK   F +D  V  A +DM+ K   +
Sbjct: 232 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCD-N 289

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A  +FD     N   +  MIT  +Q      A+ LF  ++ SG   D  +LSGV  A
Sbjct: 290 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 349

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ ++  + G Q++  AI++ L+LDVCV  + +DMY KC    ++ ++ +VFD M   + 
Sbjct: 350 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ---ALAEAFRVFDEMRRRDA 406

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQV 410
           +SW AII  + Q+G +  E + LF  M++ ++ P+ FTF S+LKAC  G+L       ++
Sbjct: 407 VSWNAIIAAHEQNG-KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL---GYGMEI 462

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN----------------- 453
           ++  VK G A +  VG SLI MY++ G +E+A K     F++                  
Sbjct: 463 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 522

Query: 454 ---LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
               VS+N+++  Y     SE A  L   + + G+    +T+A++L   +++ + G G+Q
Sbjct: 523 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 582

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IHA++IK   +S+  I + L+ MYS+C ++  +  +F++   R+ ++W +MI G+A HG 
Sbjct: 583 IHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK 642

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+++F +M+ + IKPN +T+I++L AC+H GLI +G ++F  M  ++G+  ++ HY+
Sbjct: 643 GEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 702

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH-GDTELGKHAAEMILEQDP 689
            MVD+LG+SG +  ALE IR MP  AD ++WRT LG C +H  + E+ + A   +L  DP
Sbjct: 703 NMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 762

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
           QD +A+ LLSN+YA AG WE V+++R+ M+   L KE GCSW+E  +++H F VG+ +HP
Sbjct: 763 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 822

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLH-ELEEEQKVQY 789
           +  EIY EL  +  ++K F    D++FV   E+EEE +  Y
Sbjct: 823 RWEEIYEELGLIYSEMKPF---DDSSFVRGVEVEEEDQWCY 860



 Score =  256 bits (653), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 187/642 (29%), Positives = 320/642 (49%), Gaps = 41/642 (6%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI-LNSLISLYSKCG 127
           M   G  P     + LL+    SR+F     V + +   K+    V+  N +I+ YSK  
Sbjct: 32  MIISGFRPTTFVLNCLLQVYTNSRDF-----VSASMVFDKMPLRDVVSWNKMINGYSKSN 86

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           D+ +AN  F  M   RD+VSW+SM+S Y+  G+ + +I +FV+M   G   +   F+ ++
Sbjct: 87  DMFKANSFFNMM-PVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIIL 145

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           + CS  E+ ++G  I+G +++ G  D+DV    AL+DM+ KG   +ES  +VF  + EKN
Sbjct: 146 KVCSFLEDTSLGMQIHGIVVRVGC-DTDVVAASALLDMYAKGKRFVES-LRVFQGIPEKN 203

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
           +V W+ +I  C Q      A++ F +M        +   + V+ +C+ L     G QLH+
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHA 263

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
            A+++  A D  V  + +DMYAKC    ++ D++ +FD   + N  S+ A+ITGY Q   
Sbjct: 264 HALKSDFAADGIVRTATLDMYAKCD---NMQDAQILFDNSENLNRQSYNAMITGYSQEEH 320

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             K A+ LF  ++   +  +  + + V +AC  +   +   Q+Y  A+K   +LD CV N
Sbjct: 321 GFK-ALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVAN 379

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           + I MY +   + +A + F+ +  ++ VS+N ++ A+ +N    +   L   +  + +  
Sbjct: 380 AAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEP 439

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC---------- 537
             +TF S+L   +  G++G G +IH+ I+KSG  SN  +  +LI MYS+C          
Sbjct: 440 DEFTFGSILKACTG-GSLGYGMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIH 498

Query: 538 ------ANVEAAFQVFKEMEDRNV----ISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
                 ANV    +  ++M ++ +    +SW S+I+G+     +  A  +F +M+  GI 
Sbjct: 499 SRFFQRANVSGTMEELEKMHNKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGIT 558

Query: 588 PNGITYIAVLSACSHAGLISEGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA- 645
           P+  TY  VL  C  A L S G  K   +   +  +   +   + +VD+  + G L ++ 
Sbjct: 559 PDKFTYATVLDTC--ANLASAGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSR 616

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE-MILE 686
           L F +S  L  D + W   +     HG  E      E MILE
Sbjct: 617 LMFEKS--LRRDFVTWNAMICGYAHHGKGEEAIQLFERMILE 656



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 139/488 (28%), Positives = 242/488 (49%), Gaps = 19/488 (3%)

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL-LKCGYFDSDVC 217
           GKQ  A HM +     GF P  +  + +++  +N+ +     +++  + L+      DV 
Sbjct: 25  GKQAHA-HMIIS----GFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLR------DVV 73

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
               +I+ + K S D+  A   F+ M  ++ V W  M++   Q G    +I +F+DM   
Sbjct: 74  SWNKMINGYSK-SNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGRE 132

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           G   D  T + ++  CS LE  + G Q+H   +R G   DV    +L+DMYAK       
Sbjct: 133 GIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAK---GKRF 189

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            +S +VF  + + N +SW+AII G VQ+      A+K F +M +     +   +ASVL++
Sbjct: 190 VESLRVFQGIPEKNSVSWSAIIAGCVQNNLLSL-ALKFFKEMQKVNAGVSQSIYASVLRS 248

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C  L +  +  Q++ HA+K   A D  V  + + MYA+   M+DA+  F++    N  SY
Sbjct: 249 CAALSELRLGGQLHAHALKSDFAADGIVRTATLDMYAKCDNMQDAQILFDNSENLNRQSY 308

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N M+  Y++  +  KA  L H +  +G+G    + + +    + +  + +G QI+   IK
Sbjct: 309 NAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRACALVKGLSEGLQIYGLAIK 368

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           S    + C+ NA I MY +C  +  AF+VF EM  R+ +SW ++I    ++G     L +
Sbjct: 369 SSLSLDVCVANAAIDMYGKCQALAEAFRVFDEMRRRDAVSWNAIIAAHEQNGKGYETLFL 428

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F  ML   I+P+  T+ ++L AC+  G +  G +   S+  + G+         ++D+  
Sbjct: 429 FVSMLRSRIEPDEFTFGSILKACT-GGSLGYGMEIHSSIV-KSGMASNSSVGCSLIDMYS 486

Query: 638 RSGSLTEA 645
           + G + EA
Sbjct: 487 KCGMIEEA 494



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/227 (22%), Positives = 101/227 (44%), Gaps = 31/227 (13%)

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           + +Q + H +  G      V N L+ +Y  S     A   F+ +  +++VS+N M++ Y+
Sbjct: 24  LGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYS 83

Query: 466 K-------------------------------NLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           K                               N  S K+ E+  ++   G+     TFA 
Sbjct: 84  KSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAI 143

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L   S +     G QIH  +++ G +++    +AL+ MY++      + +VF+ + ++N
Sbjct: 144 ILKVCSFLEDTSLGMQIHGIVVRVGCDTDVVAASALLDMYAKGKRFVESLRVFQGIPEKN 203

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            +SW+++I G  ++   + AL+ F +M       +   Y +VL +C+
Sbjct: 204 SVSWSAIIAGCVQNNLLSLALKFFKEMQKVNAGVSQSIYASVLRSCA 250



 Score = 67.4 bits (163), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 49/203 (24%), Positives = 87/203 (42%), Gaps = 45/203 (22%)

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           GA+  G+Q HA +I SGF     + N L+ +Y+   +  +A  VF +M  R+V+SW  MI
Sbjct: 20  GALELGKQAHAHMIISGFRPTTFVLNCLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMI 79

Query: 563 TGFAK-------------------------------HGFAARALEIFYKMLADGIKPNGI 591
            G++K                               +G + +++E+F  M  +GI+ +G 
Sbjct: 80  NGYSKSNDMFKANSFFNMMPVRDVVSWNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGR 139

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME------HYACMVDLLGRSGSLTEA 645
           T+  +L  CS     S G +        HGIV R+         + ++D+  +     E+
Sbjct: 140 TFAIILKVCSFLEDTSLGMQI-------HGIVVRVGCDTDVVAASALLDMYAKGKRFVES 192

Query: 646 LEFIRSMPLSADVLVWRTFLGAC 668
           L   + +P   + + W   +  C
Sbjct: 193 LRVFQGIP-EKNSVSWSAIIAGC 214


>gi|147812559|emb|CAN70631.1| hypothetical protein VITISV_020725 [Vitis vinifera]
          Length = 713

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 242/691 (35%), Positives = 402/691 (58%), Gaps = 13/691 (1%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
           N +L + +H  ++++ L  ++  L  L+    K G L  A ++F  M  K D +SW+++I
Sbjct: 34  NDNLSQNIH-FISQTDLPESNKQLKELV----KTGHLGNARRMFDKMSQK-DEISWTTLI 87

Query: 153 SSYVNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           S YVN     +A+ +F  M +E G   + +  S   +AC    +V  G +++G+ +K G 
Sbjct: 88  SGYVNANDSSEALLLFKNMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGL 147

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
            +S V VG AL+DM+ K     E   +VF +M  +N V WT +IT   + G  ++A+  F
Sbjct: 148 VNS-VFVGSALLDMYTKNGKIFE-GRRVFHEMPMRNVVSWTAIITGLVRAGYNKEALVYF 205

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            +M  S    D +T +  + AC++      G+++H+ A++ G  +   V  +L  MY KC
Sbjct: 206 SEMWRSRVEYDSYTFAIALKACADSGALNYGREIHAQAMKKGFDVSSFVANTLATMYNKC 265

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G ++    +F++M   +V+SWT IIT  VQ G +++ AV+ F  M +  V+PN +TF
Sbjct: 266 ---GKLEYGLTLFEKMSMRDVVSWTTIITTLVQMG-QEECAVQAFIRMRESDVSPNEYTF 321

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           A+V+  C NL      EQ++   +  G A    V NS+++MYA+ G++  +   F  +  
Sbjct: 322 AAVISGCANLARIEWGEQLHALILHLGLAASLSVENSIMTMYAKCGQLTSSSVIFHEMTR 381

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +++VS++T++  Y +  +  +AFELL  +   G   + +  AS+LS   ++  +  G+Q+
Sbjct: 382 RDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQL 441

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA ++  G E    + +ALI+MY +C ++E A ++F   E+ +++SWT+MI G+A+HG++
Sbjct: 442 HAYVLSIGLEHTAMVLSALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYS 501

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
              +++F K+   G++P+ +T+I VLSACSHAGL+  G+ +F +M  ++ I    EHY C
Sbjct: 502 REVIDLFEKIPRVGLRPDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGC 561

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           M+DLL R+G L++A   I +MP   D +VW T L ACRVHGD E G+  AE IL+ +P  
Sbjct: 562 MIDLLCRAGRLSDAEHMIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQLEPNC 621

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              HI L+N+YAS G W   A+IRK MK + +IKE G SWI+  + V  F  G+ SHP+ 
Sbjct: 622 AGTHITLANIYASKGKWREAADIRKLMKSKGVIKEPGWSWIKVKDLVFAFVAGDRSHPQG 681

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
            +IY  LD LA + +    + +T F+ ++LE
Sbjct: 682 EDIYNMLDLLASRTELADCVQETGFLPYDLE 712



 Score =  221 bits (563), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 148/525 (28%), Positives = 262/525 (49%), Gaps = 11/525 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++  + G   D    SL  K+C  + + + G+L+H    ++ L  +  + ++L+ +Y+K 
Sbjct: 105 NMRVESGLRIDPFILSLAHKACGLNSDVNYGELLHGYAVKTGLVNSVFVGSALLDMYTKN 164

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G + E  ++F  M   R++VSW+++I+  V  G   +A+  F EM       + Y F+  
Sbjct: 165 GKIFEGRRVFHEM-PMRNVVSWTAIITGLVRAGYNKEALVYFSEMWRSRVEYDSYTFAIA 223

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           ++AC+++  +  G  I+   +K G FD    V   L  M+ K    LE    +F+KM+ +
Sbjct: 224 LKACADSGALNYGREIHAQAMKKG-FDVSSFVANTLATMYNKCG-KLEYGLTLFEKMSMR 281

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V WT +IT   Q+G    A++ F+ M  S   P+ +T + V+S C+ L     G+QLH
Sbjct: 282 DVVSWTTIITTLVQMGQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLH 341

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           +  +  GLA  + V  S++ MYAKC   G +  S  +F  M   +++SW+ II GY Q G
Sbjct: 342 ALILHLGLAASLSVENSIMTMYAKC---GQLTSSSVIFHEMTRRDIVSWSTIIAGYXQ-G 397

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           G   EA +L S M      P  F  ASVL ACGN+      +Q++ + +  G      V 
Sbjct: 398 GHVSEAFELLSWMRMEGPKPTEFALASVLSACGNMAILEHGKQLHAYVLSIGLEHTAMVL 457

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           ++LI+MY + G +E+A + F++    ++VS+  M++ YA++  S +  +L  +I   G+ 
Sbjct: 458 SALINMYCKCGSIEEASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLR 517

Query: 487 TSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
             + TF  +LS  S  G +  G    +A   K     +   Y  +I +  R   +  A  
Sbjct: 518 PDSVTFIGVLSACSHAGLVDLGFHYFNAMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEH 577

Query: 546 VFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + + M   R+ + W++++     HG   R      ++L   ++PN
Sbjct: 578 MIEAMPFHRDDVVWSTLLRACRVHGDVERGRRTAERILQ--LEPN 620



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 95/355 (26%), Positives = 163/355 (45%), Gaps = 27/355 (7%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ + A+     M +    P+  T++ ++  C        G+ +H+L+    L  +  + 
Sbjct: 297 GQEECAVQAFIRMRESDVSPNEYTFAAVISGCANLARIEWGEQLHALILHLGLAASLSVE 356

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NS++++Y+KCG L  ++ IF  M  +RDIVSWS++I+ Y   G   +A  +   M   G 
Sbjct: 357 NSIMTMYAKCGQLTSSSVIFHEM-TRRDIVSWSTIIAGYXQGGHVSEAFELLSWMRMEGP 415

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            P E+  ++V+ AC N   +  G  ++ ++L  G  +    V  ALI+M+ K GS+  E 
Sbjct: 416 KPTEFALASVLSACGNMAILEHGKQLHAYVLSIG-LEHTAMVLSALINMYCKCGSI--EE 472

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++FD     + V WT MI    + G  R+ I LF  +   G  PD  T  GV+SACS 
Sbjct: 473 ASRIFDAAENDDIVSWTAMINGYAEHGYSREVIDLFEKIPRVGLRPDSVTFIGVLSACSH 532

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDRMLDH 350
             L   G    +       A+      S    +  C +D     G + D+  + + M  H
Sbjct: 533 AGLVDLGFHYFN-------AMSKKYQISPSKEHYGCMIDLLCRAGRLSDAEHMIEAMPFH 585

Query: 351 -NVMSWTAI-----ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            + + W+ +     + G V+ G R  E +      ++   A  H T A++  + G
Sbjct: 586 RDDVVWSTLLRACRVHGDVERGRRTAERIL----QLEPNCAGTHITLANIYASKG 636


>gi|302763761|ref|XP_002965302.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
 gi|300167535|gb|EFJ34140.1| hypothetical protein SELMODRAFT_83034 [Selaginella moellendorffii]
          Length = 600

 Score =  446 bits (1146), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 220/575 (38%), Positives = 346/575 (60%), Gaps = 6/575 (1%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++  C++ +    GK++HS  ++ G A D  +   L++MY KC   G + ++R VFD++ 
Sbjct: 30  LLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKC---GGIAEARSVFDQIQ 86

Query: 349 DHN--VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           + N  V+SW  II  Y Q+G   KEA+ LF  M    V  N  T  + + AC +L     
Sbjct: 87  EKNADVISWNGIIGAYTQNG-LGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
              V+  AV +    D  VG SL++M+ +   ++ AR  F+SL  KNLV++N MV  Y++
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N   +KA ++   ++  GV   A TF +++   +++ A  +G  +H  I  SG   +  +
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIPMDVAL 265

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             A++  Y +C  ++ A  +F  +  +N ++W++++  +A++G+   A+E++++M+  G+
Sbjct: 266 GTAVMHFYGKCGRLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQGGL 325

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           + NGIT++ +L ACSHAG   +G  +F SM  + G+V   EHY  ++DLLGRSG L  + 
Sbjct: 326 EVNGITFLGLLFACSHAGRSMDGVDYFVSMIRDFGVVPVFEHYLNLIDLLGRSGQLQLSE 385

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
           + I SMP   D   W   LGACR+HGD + G   AE+I E DP+D   +ILLSNLY+S G
Sbjct: 386 DLINSMPYEPDSSAWLALLGACRMHGDVDRGARIAELIYELDPEDSGPYILLSNLYSSTG 445

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
             +     RK M+ R + K+ G S IE  ++VH+F   +  HP+   I+AE+++L  ++K
Sbjct: 446 RMDEARRTRKAMRLRGITKQPGLSSIEVKDRVHEFMAAQKLHPQLGRIHAEIERLKARVK 505

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           E GY+ D   VL ++EEE+K Q L+ HSE++A+AFGLIST     + + KNLRVC DCH 
Sbjct: 506 EAGYVADVRAVLRDVEEEEKEQLLWYHSERLAIAFGLISTPPGTALHIVKNLRVCFDCHA 565

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A+K IS V GR+IV+RD+ RFHH ++G CSC DYW
Sbjct: 566 AVKAISKVVGRKIVVRDAIRFHHFENGACSCGDYW 600



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 107/323 (33%), Positives = 176/323 (54%), Gaps = 7/323 (2%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           ++ TY LLLK C  S+    GK VHS L +     + +I N LI +Y KCG + EA  +F
Sbjct: 23  EISTYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVF 82

Query: 137 KSMGNKR-DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
             +  K  D++SW+ +I +Y   G   +A+H+F  M   G   N+      I AC++  +
Sbjct: 83  DQIQEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPS 142

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
              G I++   +     +SD  VG +L++MF K   ++++A  VFD +  KN V W  M+
Sbjct: 143 EEEGRIVHAIAVD-KRLESDTMVGTSLVNMFGKCK-NVDAARAVFDSLPRKNLVTWNNMV 200

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
              +Q    + AI++F  M L G  PD  T   ++ AC+ L   T G+ +H     +G+ 
Sbjct: 201 AVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASGIP 260

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           +DV +G +++  Y KC   G +D++R +FD +   N ++W+AI+  Y Q+ G + EA++L
Sbjct: 261 MDVALGTAVMHFYGKC---GRLDNARAIFDSLGKKNTVTWSAILAAYAQN-GYETEAIEL 316

Query: 376 FSDMIQGQVAPNHFTFASVLKAC 398
           + +M+QG +  N  TF  +L AC
Sbjct: 317 YHEMVQGGLEVNGITFLGLLFAC 339



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/301 (25%), Positives = 157/301 (52%), Gaps = 11/301 (3%)

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
           T+  +LK C +       ++V++  VK G A D  + N LI MY + G + +AR  F+ +
Sbjct: 26  TYVLLLKKCADSKALLEGKRVHSCLVKDGYASDRLIANLLIEMYGKCGGIAEARSVFDQI 85

Query: 450 FEKN--LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            EKN  ++S+N ++ AY +N   ++A  L   ++  GV  +  T  + +   +S+ +  +
Sbjct: 86  QEKNADVISWNGIIGAYTQNGLGKEALHLFKTMDLEGVIANQVTLINAIDACASLPSEEE 145

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G  +HA  +    ES+  +  +L++M+ +C NV+AA  VF  +  +N+++W +M+  +++
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSLPRKNLVTWNNMVAVYSQ 205

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE---HGIVQ 624
           +    +A+++F  M  +G++P+ +T++ ++ AC+     +EG    R ++D+    GI  
Sbjct: 206 NWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEG----RMVHDDITASGIPM 261

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG-DTELGKHAAEM 683
            +     ++   G+ G L  A     S+    + + W   L A   +G +TE  +   EM
Sbjct: 262 DVALGTAVMHFYGKCGRLDNARAIFDSLG-KKNTVTWSAILAAYAQNGYETEAIELYHEM 320

Query: 684 I 684
           +
Sbjct: 321 V 321



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 109/198 (55%), Gaps = 3/198 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G++VH++    +LE ++++  SL++++ KC +++ A  +F S+  ++++V+W++M++ Y 
Sbjct: 146 GRIVHAIAVDKRLESDTMVGTSLVNMFGKCKNVDAARAVFDSL-PRKNLVTWNNMVAVYS 204

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              +   AI +F  M   G  P+   F  +I AC+       G +++  +   G    DV
Sbjct: 205 QNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITASG-IPMDV 263

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +G A++  + K    L++A  +FD + +KNTV W+ ++    Q G   +AI L+ +M+ 
Sbjct: 264 ALGTAVMHFYGKCG-RLDNARAIFDSLGKKNTVTWSAILAAYAQNGYETEAIELYHEMVQ 322

Query: 277 SGFLPDRFTLSGVVSACS 294
            G   +  T  G++ ACS
Sbjct: 323 GGLEVNGITFLGLLFACS 340



 Score = 79.3 bits (194), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 47  SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           +N +  +  + + +KAI     M  +G  PD  T+  ++ +C        G++VH  +T 
Sbjct: 197 NNMVAVYSQNWQCKKAIQVFRFMDLEGVQPDAVTFLTIIDACAALAAHTEGRMVHDDITA 256

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           S +  +  +  +++  Y KCG L+ A  IF S+G K++ V+WS+++++Y   G + +AI 
Sbjct: 257 SGIPMDVALGTAVMHFYGKCGRLDNARAIFDSLG-KKNTVTWSAILAAYAQNGYETEAIE 315

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++ EM++ G   N   F  ++ ACS+ 
Sbjct: 316 LYHEMVQGGLEVNGITFLGLLFACSHA 342


>gi|225438894|ref|XP_002279137.1| PREDICTED: pentatricopeptide repeat-containing protein At4g37380,
           chloroplastic-like [Vitis vinifera]
          Length = 628

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/589 (39%), Positives = 344/589 (58%), Gaps = 39/589 (6%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+   R GL     +   L   YA     G +D S  +F R  + +V  WTAII G+ 
Sbjct: 48  QIHAVLFRHGLDHHPILNFKLQRSYASL---GRLDYSVALFGRTQNPSVFFWTAIIHGHA 104

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
             G   ++A+  ++ M+   V PN FTF+S+LK C         + +++ AVK G   D 
Sbjct: 105 LRG-LHEQALNFYAQMLTQGVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDL 159

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVS--------------------------- 456
            V   L+ +YAR G +  A++ F+++ EK+LVS                           
Sbjct: 160 YVRTGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEER 219

Query: 457 ----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
               +N M+D Y +N    +A  L   +       +  T  S+LS    +GA+  G  +H
Sbjct: 220 DGVCWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVH 279

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           + I  +G + N  +  AL+ MYS+C ++E A  VF +++D++V++W SMI G+A HGF+ 
Sbjct: 280 SYIENNGIQFNVHVGTALVDMYSKCGSLEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQ 339

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            AL++F  M   G+ P  IT+I +LSAC H+G ++EGW  F  M DE+GI  ++EHY CM
Sbjct: 340 EALQLFKSMCRMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHYGCM 399

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           V+LLGR+G + +A E +++M +  D ++W T LGACR+HG   LG+   E++++Q+  + 
Sbjct: 400 VNLLGRAGHVEQAYELVKNMNIEPDPVLWGTLLGACRLHGKIALGEKIVELLVDQNLANS 459

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
             +ILLSN+YA+ G+W+ VA +R  MK+  + KE GCS IE +NKVH+F  G  +HPK  
Sbjct: 460 GTYILLSNIYAAVGNWDGVARLRTMMKDSGVKKEPGCSSIEVNNKVHEFLAGGLNHPKRK 519

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           EIY  L+++   +K  GY P T+ VLH++ E +K + L  HSEK+A+AFGLI+T     I
Sbjct: 520 EIYMMLEEINGWLKSHGYTPQTDIVLHDIGETEKERSLEVHSEKLAIAFGLINTQPGTTI 579

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++ KNLRVC DCH   K IS +TGR+IV+RD NRFHH  +G CSC DYW
Sbjct: 580 KIVKNLRVCADCHEVTKLISKITGRKIVVRDRNRFHHFVNGSCSCGDYW 628



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 230/486 (47%), Gaps = 74/486 (15%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H++L R  L+ + ++   L   Y+  G L+ +  +F    N   +  W+++I  +  RG
Sbjct: 49  IHAVLFRHGLDHHPILNFKLQRSYASLGRLDYSVALFGRTQNP-SVFFWTAIIHGHALRG 107

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
               A++ + +ML  G  PN + FS++++ C     +  G  ++   +K G FDSD+ V 
Sbjct: 108 LHEQALNFYAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLG-FDSDLYVR 162

Query: 220 CALIDMFVKGS------------------------------VDLESAYKVFDKMTEKNTV 249
             L+D++ +G                                +L++A  +FD M E++ V
Sbjct: 163 TGLLDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGV 222

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W +MI   TQ G P +A+ LF  M+ +   P+  T+  V+SAC +L    SG+ +HS+ 
Sbjct: 223 CWNVMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYI 282

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
              G+  +V VG +LVDMY+KC   GS++D+R VFD++ D +V++W ++I GY    G  
Sbjct: 283 ENNGIQFNVHVGTALVDMYSKC---GSLEDARLVFDKIDDKDVVAWNSMIVGYAMH-GFS 338

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           +EA++LF  M +  + P + TF  +L ACG           ++  V  G  + +      
Sbjct: 339 QEALQLFKSMCRMGLHPTNITFIGILSACG-----------HSGWVTEGWDIFN------ 381

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
                   +M+D     E   E  +  Y  MV+   +  + E+A+EL   +++  +    
Sbjct: 382 --------KMKD-----EYGIEPKIEHYGCMVNLLGRAGHVEQAYEL---VKNMNIEPDP 425

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
             + +LL      G I  GE+I   ++     +N   Y  L ++Y+   N +   ++   
Sbjct: 426 VLWGTLLGACRLHGKIALGEKIVELLVDQNL-ANSGTYILLSNIYAAVGNWDGVARLRTM 484

Query: 550 MEDRNV 555
           M+D  V
Sbjct: 485 MKDSGV 490



 Score =  103 bits (258), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 39/274 (14%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q   F   ++TQ G  P+  T+S +LK C        GK +HS   +   + +  +   L
Sbjct: 111 QALNFYAQMLTQ-GVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGL 165

Query: 120 ISLYSKCGDLNEANKIFKSMGNK------------------------------RDIVSWS 149
           + +Y++ GD+  A ++F +M  K                              RD V W+
Sbjct: 166 LDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN 225

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
            MI  Y   G   +A+ +F  ML+    PNE    +V+ AC     +  G  ++ ++   
Sbjct: 226 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 285

Query: 210 GYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
           G    +V VG AL+DM+ K GS  LE A  VFDK+ +K+ V W  MI      G  ++A+
Sbjct: 286 G-IQFNVHVGTALVDMYSKCGS--LEDARLVFDKIDDKDVVAWNSMIVGYAMHGFSQEAL 342

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           +LF  M   G  P   T  G++SAC      T G
Sbjct: 343 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG 376



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/212 (26%), Positives = 97/212 (45%), Gaps = 17/212 (8%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M +    P+  T   +L +C +      G+ VHS +  + ++ N  
Sbjct: 233 QNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVH 292

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +L+ +YSKCG L +A  +F  + +K D+V+W+SMI  Y   G   +A+ +F  M  +
Sbjct: 293 VGTALVDMYSKCGSLEDARLVFDKIDDK-DVVAWNSMIVGYAMHGFSQEALQLFKSMCRM 351

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFV 227
           G  P    F  ++ AC ++  V  G  I       YG   K  ++      GC +  +  
Sbjct: 352 GLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY------GCMVNLLGR 405

Query: 228 KGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
            G V  E AY++   M  E + V W  ++  C
Sbjct: 406 AGHV--EQAYELVKNMNIEPDPVLWGTLLGAC 435


>gi|334185027|ref|NP_186882.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546764|sp|Q9FWA6.2|PP207_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g02330
 gi|332640272|gb|AEE73793.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 903

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 253/761 (33%), Positives = 435/761 (57%), Gaps = 37/761 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L +G   K+I     M ++G   D  T++++LK C    +  LG  +H ++ R   + +
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V  ++L+ +Y+K     E+ ++F+ +  K   VSWS++I+  V       A+  F EM 
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEKNS-VSWSAIIAGCVQNNLLSLALKFFKEMQ 273

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           ++    ++  +++V+R+C+    + +G  ++   LK   F +D  V  A +DM+ K   +
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCD-N 331

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A  +FD     N   +  MIT  +Q      A+ LF  ++ SG   D  +LSGV  A
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ ++  + G Q++  AI++ L+LDVCV  + +DMY KC    ++ ++ +VFD M   + 
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ---ALAEAFRVFDEMRRRDA 448

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQV 410
           +SW AII  + Q+G +  E + LF  M++ ++ P+ FTF S+LKAC  G+L       ++
Sbjct: 449 VSWNAIIAAHEQNG-KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL---GYGMEI 504

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN----------------- 453
           ++  VK G A +  VG SLI MY++ G +E+A K     F++                  
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564

Query: 454 ---LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
               VS+N+++  Y     SE A  L   + + G+    +T+A++L   +++ + G G+Q
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IHA++IK   +S+  I + L+ MYS+C ++  +  +F++   R+ ++W +MI G+A HG 
Sbjct: 625 IHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK 684

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+++F +M+ + IKPN +T+I++L AC+H GLI +G ++F  M  ++G+  ++ HY+
Sbjct: 685 GEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 744

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH-GDTELGKHAAEMILEQDP 689
            MVD+LG+SG +  ALE IR MP  AD ++WRT LG C +H  + E+ + A   +L  DP
Sbjct: 745 NMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 804

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
           QD +A+ LLSN+YA AG WE V+++R+ M+   L KE GCSW+E  +++H F VG+ +HP
Sbjct: 805 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLH-ELEEEQKVQY 789
           +  EIY EL  +  ++K F    D++FV   E+EEE +  Y
Sbjct: 865 RWEEIYEELGLIYSEMKPF---DDSSFVRGVEVEEEDQWCY 902



 Score =  260 bits (665), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 190/682 (27%), Positives = 326/682 (47%), Gaps = 65/682 (9%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           RV    +  D + Q  N      +S + K C +     LGK  H+ +  S   P + +LN
Sbjct: 29  RVPSFSYFTDFLNQV-NSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLN 87

Query: 118 SLISLYSKCGDLNEANKIFKSMG-------NK-----------------------RDIVS 147
            L+ +Y+   D   A+ +F  M        NK                       RD+VS
Sbjct: 88  CLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVS 147

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W+SM+S Y+  G+ + +I +FV+M   G   +   F+ +++ CS  E+ ++G  I+G ++
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           + G  D+DV    AL+DM+ KG   +ES  +VF  + EKN+V W+ +I  C Q      A
Sbjct: 208 RVGC-DTDVVAASALLDMYAKGKRFVES-LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           ++ F +M        +   + V+ +C+ L     G QLH+ A+++  A D  V  + +DM
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           YAKC    ++ D++ +FD   + N  S+ A+ITGY Q     K A+ LF  ++   +  +
Sbjct: 326 YAKCD---NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK-ALLLFHRLMSSGLGFD 381

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
             + + V +AC  +   +   Q+Y  A+K   +LD CV N+ I MY +   + +A + F+
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            +  ++ VS+N ++ A+ +N    +   L   +  + +    +TF S+L   +  G++G 
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGY 500

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRC----------------ANVEAAFQVFKEME 551
           G +IH+ I+KSG  SN  +  +LI MYS+C                ANV    +  ++M 
Sbjct: 501 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560

Query: 552 DRNV----ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           ++ +    +SW S+I+G+     +  A  +F +M+  GI P+  TY  VL  C  A L S
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLAS 618

Query: 608 EGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEFIRSMPLSADVLVWRTFL 665
            G  K   +   +  +   +   + +VD+  + G L ++ L F +S  L  D + W   +
Sbjct: 619 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS--LRRDFVTWNAMI 676

Query: 666 GACRVHGDTELGKHAAE-MILE 686
                HG  E      E MILE
Sbjct: 677 CGYAHHGKGEEAIQLFERMILE 698


>gi|115456187|ref|NP_001051694.1| Os03g0816600 [Oryza sativa Japonica Group]
 gi|113550165|dbj|BAF13608.1| Os03g0816600, partial [Oryza sativa Japonica Group]
          Length = 708

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/585 (38%), Positives = 346/585 (59%), Gaps = 8/585 (1%)

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           SG   DRFT + ++ A ++L   T+ ++L     R  +        S   ++     +G 
Sbjct: 132 SGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVM-------SWNILFGGYIKNGD 184

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +  +RK+FD M + NV +W A++ G    G  D+E++  F DM +  + P+ F   SV +
Sbjct: 185 LGGARKLFDEMPERNVATWNAMVAGLTNLG-FDEESLGFFLDMRREGMHPDEFGLGSVFR 243

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
            C  L D     QV+ + V+ G   D CVG+SL  MY R G +++       L   ++VS
Sbjct: 244 CCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVS 303

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
            NT++    +N +SE A E    +   GV     TF S +S  S + A+ +G+QIH +++
Sbjct: 304 CNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVM 363

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K+G +    +   L+ MYSRC  +  + +VF      +    ++MI+ +  HG   +A+E
Sbjct: 364 KAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIE 423

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M+  G +P+ +T++A+L ACSH+GL  EG   F  M   +G+   ++HY C+VDLL
Sbjct: 424 LFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLL 483

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GRSG L EA   I SMPL+ D ++W+T L AC+   + ++ +  A+ ++E DP D A+++
Sbjct: 484 GRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYV 543

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+ A++  W  V+ +RK M++ N+ KE G SW+E    +H+F  G+ SHP+  EI  
Sbjct: 544 LLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDE 603

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            L+++  KI++ GY PD + VLH++E+E+K   L  HSEK+A+AF  +S  +  PIRV K
Sbjct: 604 CLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMK 663

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVC DCH AIK +S VTGREIV+RD +RFHH KDG+CSC DYW
Sbjct: 664 NLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 708



 Score =  142 bits (358), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 95/335 (28%), Positives = 161/335 (48%), Gaps = 8/335 (2%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DL  A K+FD+M E+N   W  M+   T LG   +++  FLDM   G  PD F L  V  
Sbjct: 184 DLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFR 243

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            C+ L    +G+Q+H++ +R+GL  D+CVG SL  MY +C   G + +   V   +   +
Sbjct: 244 CCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC---GCLQEGEAVLRMLPSLS 300

Query: 352 VMSWTAIITGYVQSGGRDKE-AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           ++S   II G  Q+G  D E A++ F  M    VA +  TF S + +C +L      +Q+
Sbjct: 301 IVSCNTIIAGRTQNG--DSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 358

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   +K G      V   L+ MY+R G + D+ + F      +    + M+ AY  + + 
Sbjct: 359 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 418

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNA 529
           +KA EL  ++ + G   S  TF +LL   S  G   +G      + K+ G + +   Y  
Sbjct: 419 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTC 478

Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
           ++ +  R   ++ A  +   M    + + W ++++
Sbjct: 479 VVDLLGRSGCLDEAEALILSMPLTPDGVIWKTLLS 513



 Score =  132 bits (333), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/289 (28%), Positives = 144/289 (49%), Gaps = 7/289 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N L   Y K GDL  A K+F  M  +R++ +W++M++   N G   +++  F++M
Sbjct: 168 NVMSWNILFGGYIKNGDLGGARKLFDEM-PERNVATWNAMVAGLTNLGFDEESLGFFLDM 226

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+E+   +V R C+   +V  G  ++ ++++ G  D D+CVG +L  M+++   
Sbjct: 227 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGC 285

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+    V   +   + V    +I   TQ G    A+  F  M   G   D  T    +S
Sbjct: 286 -LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 344

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +CS+L     G+Q+H   ++ G+   V V   LV MY++C   G + DS +VF      +
Sbjct: 345 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC---GCLGDSERVFFGYCGSD 401

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
               +A+I+ Y    G  ++A++LF  M+ G   P+  TF ++L AC +
Sbjct: 402 TFLLSAMISAY-GFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSH 449



 Score = 99.8 bits (247), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 77/346 (22%), Positives = 152/346 (43%), Gaps = 41/346 (11%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F+ + +AC  L       Q++  A   G A D    N L+  YA  G +  AR+ FE + 
Sbjct: 109 FSHLFRACRAL---RPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 165

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT----------------------- 487
            +N++S+N +   Y KN +   A +L  E+ +  V T                       
Sbjct: 166 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 225

Query: 488 --------SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
                     +   S+    + +  +  G Q+HA +++SG + + C+ ++L  MY RC  
Sbjct: 226 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 285

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           ++    V + +   +++S  ++I G  ++G +  ALE F  M + G+  + +T+++ +S+
Sbjct: 286 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 345

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CS    +++G +       + G+ + +    C+V +  R G L ++ E +      +D  
Sbjct: 346 CSDLAALAQG-QQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDS-ERVFFGYCGSDTF 403

Query: 660 VWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYA 703
           +    + A   HG    G+ A E+   +     +P+    L+ LYA
Sbjct: 404 LLSAMISAYGFHGH---GQKAIELFKQMMNGGAEPSDVTFLALLYA 446



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 4/239 (1%)

Query: 64  FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLY 123
           F LD M ++G HPD      + + C   R+   G+ VH+ + RS L+ +  + +SL  +Y
Sbjct: 222 FFLD-MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMY 280

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            +CG L E   + + M     IVS +++I+     G    A+  F  M  +G   +   F
Sbjct: 281 MRCGCLQEGEAVLR-MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTF 339

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
            + I +CS+   +A G  I+G ++K G  D  V V   L+ M+ +    L  + +VF   
Sbjct: 340 VSAISSCSDLAALAQGQQIHGQVMKAG-VDKVVPVMTCLVHMYSRCGC-LGDSERVFFGY 397

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
              +T   + MI+     G  + AI LF  M+  G  P   T   ++ ACS   L   G
Sbjct: 398 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 456



 Score = 58.5 bits (140), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 1/204 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  + A+    +M   G   D+ T+   + SC        G+ +H  + ++ ++    
Sbjct: 313 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 372

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++  L+ +YS+CG L ++ ++F       D    S+MIS+Y   G    AI +F +M+  
Sbjct: 373 VMTCLVHMYSRCGCLGDSERVFFGYCGS-DTFLLSAMISAYGFHGHGQKAIELFKQMMNG 431

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P++  F A++ ACS++     G   +  + K       V     ++D+  +     E
Sbjct: 432 GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDE 491

Query: 235 SAYKVFDKMTEKNTVGWTLMITRC 258
           +   +       + V W  +++ C
Sbjct: 492 AEALILSMPLTPDGVIWKTLLSAC 515


>gi|108711755|gb|ABF99550.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215697380|dbj|BAG91374.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 646

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 223/585 (38%), Positives = 348/585 (59%), Gaps = 8/585 (1%)

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           SG   DRFT + ++ A ++L   T+ ++L     R  +        S   ++     +G 
Sbjct: 70  SGAATDRFTANHLMLAYADLGDLTAARELFERIPRRNVM-------SWNILFGGYIKNGD 122

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +  +RK+FD M + NV +W A++ G + + G D+E++  F DM +  + P+ F   SV +
Sbjct: 123 LGGARKLFDEMPERNVATWNAMVAG-LTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFR 181

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
            C  L D     QV+ + V+ G   D CVG+SL  MY R G +++       L   ++VS
Sbjct: 182 CCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGCLQEGEAVLRMLPSLSIVS 241

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
            NT++    +N +SE A E    +   GV     TF S +S  S + A+ +G+QIH +++
Sbjct: 242 CNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVM 301

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K+G +    +   L+ MYSRC  +  + +VF      +    ++MI+ +  HG   +A+E
Sbjct: 302 KAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHGQKAIE 361

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M+  G +P+ +T++A+L ACSH+GL  EG   F  M   +G+   ++HY C+VDLL
Sbjct: 362 LFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLL 421

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GRSG L EA   I SMPL+ D ++W+T L AC+   + ++ +  A+ ++E DP D A+++
Sbjct: 422 GRSGCLDEAEALILSMPLTPDGVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYV 481

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           LLSN+ A++  W  V+ +RK M++ N+ KE G SW+E    +H+F  G+ SHP+  EI  
Sbjct: 482 LLSNIRATSRRWGDVSEVRKAMRDNNVRKEPGVSWVELKGHIHQFCTGDESHPRQKEIDE 541

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            L+++  KI++ GY PD + VLH++E+E+K   L  HSEK+A+AF  +S  +  PIRV K
Sbjct: 542 CLEEMMAKIRQCGYSPDMSMVLHDMEDEEKEVSLSHHSEKLAIAFAFLSLPEGVPIRVMK 601

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVC DCH AIK +S VTGREIV+RD +RFHH KDG+CSC DYW
Sbjct: 602 NLRVCDDCHLAIKLMSQVTGREIVVRDVSRFHHFKDGRCSCRDYW 646



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 93/314 (29%), Positives = 152/314 (48%), Gaps = 7/314 (2%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DL  A K+FD+M E+N   W  M+   T LG   +++  FLDM   G  PD F L  V  
Sbjct: 122 DLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLDMRREGMHPDEFGLGSVFR 181

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            C+ L    +G+Q+H++ +R+GL  D+CVG SL  MY +C   G + +   V   +   +
Sbjct: 182 CCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC---GCLQEGEAVLRMLPSLS 238

Query: 352 VMSWTAIITGYVQSGGRDKE-AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           ++S   II G  Q+G  D E A++ F  M    VA +  TF S + +C +L      +Q+
Sbjct: 239 IVSCNTIIAGRTQNG--DSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQI 296

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   +K G      V   L+ MY+R G + D+ + F      +    + M+ AY  + + 
Sbjct: 297 HGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDSERVFFGYCGSDTFLLSAMISAYGFHGHG 356

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNA 529
           +KA EL  ++ + G   S  TF +LL   S  G   +G      + K+ G + +   Y  
Sbjct: 357 QKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTC 416

Query: 530 LISMYSRCANVEAA 543
           ++ +  R   ++ A
Sbjct: 417 VVDLLGRSGCLDEA 430



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/287 (28%), Positives = 143/287 (49%), Gaps = 7/287 (2%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N L   Y K GDL  A K+F  M  +R++ +W++M++   N G   +++  F++M
Sbjct: 106 NVMSWNILFGGYIKNGDLGGARKLFDEM-PERNVATWNAMVAGLTNLGFDEESLGFFLDM 164

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+E+   +V R C+   +V  G  ++ ++++ G  D D+CVG +L  M+++   
Sbjct: 165 RREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGC 223

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L+    V   +   + V    +I   TQ G    A+  F  M   G   D  T    +S
Sbjct: 224 -LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAIS 282

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           +CS+L     G+Q+H   ++ G+   V V   LV MY++C   G + DS +VF      +
Sbjct: 283 SCSDLAALAQGQQIHGQVMKAGVDKVVPVMTCLVHMYSRC---GCLGDSERVFFGYCGSD 339

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
               +A+I+ Y    G  ++A++LF  M+ G   P+  TF ++L AC
Sbjct: 340 TFLLSAMISAY-GFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYAC 385



 Score = 99.8 bits (247), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 97/465 (20%), Positives = 187/465 (40%), Gaps = 60/465 (12%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           F+ + +AC  L       Q++  A   G A D    N L+  YA  G +  AR+ FE + 
Sbjct: 47  FSHLFRACRAL---RPLRQLHAFAATSGAATDRFTANHLMLAYADLGDLTAARELFERIP 103

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT----------------------- 487
            +N++S+N +   Y KN +   A +L  E+ +  V T                       
Sbjct: 104 RRNVMSWNILFGGYIKNGDLGGARKLFDEMPERNVATWNAMVAGLTNLGFDEESLGFFLD 163

Query: 488 --------SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
                     +   S+    + +  +  G Q+HA +++SG + + C+ ++L  MY RC  
Sbjct: 164 MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGC 223

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           ++    V + +   +++S  ++I G  ++G +  ALE F  M + G+  + +T+++ +S+
Sbjct: 224 LQEGEAVLRMLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTFVSAISS 283

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CS    +++G +       + G+ + +    C+V +  R G L ++ E +      +D  
Sbjct: 284 CSDLAALAQG-QQIHGQVMKAGVDKVVPVMTCLVHMYSRCGCLGDS-ERVFFGYCGSDTF 341

Query: 660 VWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
           +    + A   HG    G+ A E+   +     +P+    L+ LYA +            
Sbjct: 342 LLSAMISAYGFHGH---GQKAIELFKQMMNGGAEPSDVTFLALLYACS------------ 386

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE---LDQLALKIKEFGYLPDT 774
               + +KE G    E   K +        +   +++      LD+    I      PD 
Sbjct: 387 ---HSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDEAEALILSMPLTPD- 442

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
             +   L    K Q  F  +E+IA     +    S    +  N+R
Sbjct: 443 GVIWKTLLSACKTQKNFDMAERIAKRVIELDPHDSASYVLLSNIR 487



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 68/239 (28%), Positives = 110/239 (46%), Gaps = 4/239 (1%)

Query: 64  FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLY 123
           F LD M ++G HPD      + + C   R+   G+ VH+ + RS L+ +  + +SL  +Y
Sbjct: 160 FFLD-MRREGMHPDEFGLGSVFRCCAGLRDVVTGRQVHAYVVRSGLDRDMCVGSSLAHMY 218

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            +CG L E   + + M     IVS +++I+     G    A+  F  M  +G   +   F
Sbjct: 219 MRCGCLQEGEAVLR-MLPSLSIVSCNTIIAGRTQNGDSEGALEYFCMMRSVGVAADVVTF 277

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
            + I +CS+   +A G  I+G ++K G  D  V V   L+ M+ +    L  + +VF   
Sbjct: 278 VSAISSCSDLAALAQGQQIHGQVMKAG-VDKVVPVMTCLVHMYSRCGC-LGDSERVFFGY 335

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
              +T   + MI+     G  + AI LF  M+  G  P   T   ++ ACS   L   G
Sbjct: 336 CGSDTFLLSAMISAYGFHGHGQKAIELFKQMMNGGAEPSDVTFLALLYACSHSGLKEEG 394



 Score = 57.8 bits (138), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 43/204 (21%), Positives = 89/204 (43%), Gaps = 1/204 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  + A+    +M   G   D+ T+   + SC        G+ +H  + ++ ++    
Sbjct: 251 QNGDSEGALEYFCMMRSVGVAADVVTFVSAISSCSDLAALAQGQQIHGQVMKAGVDKVVP 310

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++  L+ +YS+CG L ++ ++F       D    S+MIS+Y   G    AI +F +M+  
Sbjct: 311 VMTCLVHMYSRCGCLGDSERVFFGYCGS-DTFLLSAMISAYGFHGHGQKAIELFKQMMNG 369

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P++  F A++ ACS++     G   +  + K       V     ++D+  +     E
Sbjct: 370 GAEPSDVTFLALLYACSHSGLKEEGMDCFELMTKTYGMQPSVKHYTCVVDLLGRSGCLDE 429

Query: 235 SAYKVFDKMTEKNTVGWTLMITRC 258
           +   +       + V W  +++ C
Sbjct: 430 AEALILSMPLTPDGVIWKTLLSAC 453


>gi|147780607|emb|CAN69113.1| hypothetical protein VITISV_031840 [Vitis vinifera]
          Length = 714

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/601 (38%), Positives = 367/601 (61%), Gaps = 11/601 (1%)

Query: 265 RDAIRLFLDMIL-SGFLPDRFTLSGV--VSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           R  + +FL  +  S  L D    S V  +S+C+ +   ++   +H+  I++    D  +G
Sbjct: 121 RTKVAVFLGKLHNSSLLADSIVQSLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIG 177

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-I 380
             LV MY K   D   +D++++FD M + +++SW ++++G +   G     +  F  M  
Sbjct: 178 DRLVSMYFKLGYD---EDAQRLFDEMPNRDLVSWNSLMSG-LSGRGYLGACLNAFCRMRT 233

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +    PN  T  SV+ AC  +   +  + ++   VK G +    V NSLI+MY + G ++
Sbjct: 234 ESGRQPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLD 293

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A + FE +  ++LVS+N+MV  +  N  +EK  +L + ++  G+     T  +LL   +
Sbjct: 294 AASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACT 353

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
             G   + E IHA I + GF ++  I  AL+++Y++   + A+  +F+E++DR+ I+WT+
Sbjct: 354 DTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKLGRLNASEDIFEEIKDRDTIAWTA 413

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           M+ G+A H     A+++F  M+ +G++ + +T+  +LSACSH+GL+ EG K+F  M + +
Sbjct: 414 MLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVY 473

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            +  R++HY+CMVDLLGRSG L +A E I+SMP+     VW   LGACRV+G+ ELGK  
Sbjct: 474 RVEPRLDHYSCMVDLLGRSGRLEDAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEV 533

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           AE +L  DP D   +I+LSN+Y++AG W   + +R  MKER L +  GCS+IE  NK+H+
Sbjct: 534 AEQLLSLDPSDHRNYIMLSNIYSAAGLWRXASKVRXLMKERRLTRNPGCSFIEHGNKIHR 593

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F VG+  HP++ EI+ +L++L  KI E G  P T FVLH+++EE KV  + +HSEK+A+A
Sbjct: 594 FVVGDQLHPRSDEIHTKLEELIRKIXEAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIA 653

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGL+ T    P+ + KNLR+CGDCH+  K+ S++  R I++RDS RFHH  DG CSC DY
Sbjct: 654 FGLLVTGSGVPLIITKNLRICGDCHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDY 713

Query: 861 W 861
           W
Sbjct: 714 W 714



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 148/565 (26%), Positives = 257/565 (45%), Gaps = 83/565 (14%)

Query: 13  PPPSSFKPSNPSRQNLPPSSSPPF---IAQPTTSEPLSNRLIYHLNDG----RVQKAIFT 65
           P P+  +P    R +L   SS PF   +A PT +      L    N      R + A+F 
Sbjct: 73  PSPAPKQP----RVSLGIPSSLPFDVGLAFPTIAPSRFGTLTSFPNSSNDSTRTKVAVFL 128

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKL--------VHSLLTRSKLEPNSVILN 117
                       L   SLL  S ++S  F +           +H+ + +S    +  I +
Sbjct: 129 ----------GKLHNSSLLADSIVQSLVFAISSCTSVSYCSAIHARVIKSLNYSDGFIGD 178

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGF 176
            L+S+Y K G   +A ++F  M N RD+VSW+S++S    RG     ++ F  M  E G 
Sbjct: 179 RLVSMYFKLGYDEDAQRLFDEMPN-RDLVSWNSLMSGLSGRGYLGACLNAFCRMRTESGR 237

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PNE    +V+ AC+    +  G  ++G ++K G       V  +LI+M+ K    L++A
Sbjct: 238 QPNEVTLLSVVSACAXMGALDEGKSLHGVVVKLGMSGKAKVVN-SLINMYGKLGF-LDAA 295

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            ++F++M  ++ V W  M+      G     + LF  M  +G  PD+ T+  ++ AC++ 
Sbjct: 296 SQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDT 355

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L    + +H++  R G   D+ +  +L+++YAK    G ++ S  +F+ + D + ++WT
Sbjct: 356 GLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL---GRLNASEDIFEEIKDRDTIAWT 412

Query: 357 AIITGY-VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           A++ GY V + GR  EA+KLF  M++  V  +H TF  +L AC                 
Sbjct: 413 AMLAGYAVHACGR--EAIKLFDLMVKEGVEVDHVTFTHLLSAC----------------- 453

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNS 470
                             + SG +E+ +K FE +      E  L  Y+ MVD   ++   
Sbjct: 454 ------------------SHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRL 495

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E A+EL   I+   +  S+  + +LL      G +  G+++  +++ S   S+H  Y  L
Sbjct: 496 EDAYEL---IKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLL-SLDPSDHRNYIML 551

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNV 555
            ++YS       A +V   M++R +
Sbjct: 552 SNIYSAAGLWRXASKVRXLMKERRL 576


>gi|110739044|dbj|BAF01440.1| hypothetical protein [Arabidopsis thaliana]
          Length = 720

 Score =  445 bits (1145), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/726 (33%), Positives = 398/726 (54%), Gaps = 13/726 (1%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----GFCPNEYCFSAVIRACSNTENVAI 198
           R+ VSW+SMI  + + G   ++  +  EM+E      F P+      V+  C+    + +
Sbjct: 1   RNFVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGL 60

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  ++G+ +K    D ++ +  AL+DM+ K    + +A  +F     KN V W  M+   
Sbjct: 61  GKGVHGWAVKL-RLDKELVLNNALMDMYSKCGC-ITNAQMIFKMNNNKNVVSWNTMVGGF 118

Query: 259 TQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
           +  G       +   M+  G     D  T+   V  C       S K+LH ++++     
Sbjct: 119 SAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVY 178

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           +  V  + V  YAKC   GS+  +++VF  +    V SW A+I G+ QS    + ++   
Sbjct: 179 NELVANAFVASYAKC---GSLSYAQRVFHGIRSKTVNSWNALIGGHAQSND-PRLSLDAH 234

Query: 377 SDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARS 436
             M    + P+ FT  S+L AC  L    + ++V+   ++     D  V  S++S+Y   
Sbjct: 235 LQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC 294

Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
           G +   +  F+++ +K+LVS+NT++  Y +N   ++A  +  ++   G+     +   + 
Sbjct: 295 GELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVF 354

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              S + ++  G + HA  +K   E +  I  +LI MY++  ++  + +VF  +++++  
Sbjct: 355 GACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTA 414

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW +MI G+  HG A  A+++F +M   G  P+ +T++ VL+AC+H+GLI EG ++   M
Sbjct: 415 SWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQM 474

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI-RSMPLSADVLVWRTFLGACRVHGDTE 675
               G+   ++HYAC++D+LGR+G L +AL  +   M   ADV +W++ L +CR+H + E
Sbjct: 475 KSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIHQNLE 534

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           +G+  A  + E +P+ P  ++LLSNLYA  G WE V  +R+RM E +L K+AGCSWIE +
Sbjct: 535 MGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVRQRMNEMSLRKDAGCSWIELN 594

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
            KV  F VGE       EI +    L +KI + GY PDT  V H+L EE+K++ L  HSE
Sbjct: 595 RKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTMSVQHDLSEEEKIEQLRGHSE 654

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           K+A+ +GLI TS+   IRV+KNLR+C DCH A K IS V  REIV+RD+ RFHH K+G C
Sbjct: 655 KLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVMEREIVVRDNKRFHHFKNGVC 714

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 715 SCGDYW 720



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 152/532 (28%), Positives = 261/532 (49%), Gaps = 19/532 (3%)

Query: 48  NRLIYHLNDGRVQKAIFTL--DLMTQKGN---HPDLDTYSLLLKSCIRSRNFHLGKLVHS 102
           N +I   +D    +  F L  ++M + G+    PD+ T   +L  C R R   LGK VH 
Sbjct: 7   NSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHG 66

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
              + +L+   V+ N+L+ +YSKCG +  A  IFK M N +++VSW++M+  +   G   
Sbjct: 67  WAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFK-MNNNKNVVSWNTMVGGFSAEGDTH 125

Query: 163 DAIHMFVEMLELG--FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
               +  +ML  G     +E      +  C +   +     ++ + LK  +  +++ V  
Sbjct: 126 GTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNEL-VAN 184

Query: 221 ALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
           A +  + K GS  L  A +VF  +  K    W  +I    Q   PR ++   L M +SG 
Sbjct: 185 AFVASYAKCGS--LSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGL 242

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           LPD FT+  ++SACS+L+    GK++H + IR  L  D+ V  S++ +Y  C   G +  
Sbjct: 243 LPDSFTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHC---GELCT 299

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            + +FD M D +++SW  +ITGY+Q+G  D+ A+ +F  M+   +     +   V  AC 
Sbjct: 300 VQALFDAMEDKSLVSWNTVITGYLQNGFPDR-ALGVFRQMVLYGIQLCGISMMPVFGACS 358

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            L    +  + + +A+K     D  +  SLI MYA++G +  + K F  L EK+  S+N 
Sbjct: 359 LLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLKEKSTASWNA 418

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS- 518
           M+  Y  +  +++A +L  E++ TG      TF  +L+  +  G I +G +   ++  S 
Sbjct: 419 MIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSF 478

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKE--MEDRNVISWTSMITGFAKH 568
           G + N   Y  +I M  R   ++ A +V  E   E+ +V  W S+++    H
Sbjct: 479 GLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSSCRIH 530


>gi|298204424|emb|CBI16904.3| unnamed protein product [Vitis vinifera]
          Length = 843

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 248/748 (33%), Positives = 422/748 (56%), Gaps = 55/748 (7%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F A P       N LI  +L++G  +K I     M + G   D  T++++LKSC    + 
Sbjct: 131 FDAMPERDVVSWNSLISGYLHNGDHRKVIDVFLQMGRMGTVFDRTTFAVVLKSCSSLEDH 190

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G  +H L  +   + + V  ++L+ +Y+KC  L+ + + F SM  K + VSWS++I+ 
Sbjct: 191 GGGIQIHGLAVKMGFDCDVVTGSALLDMYAKCKKLDCSIQFFHSMPEK-NWVSWSAIIAG 249

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            V        + +F EM + G   ++  F++V R+C+    + +G  ++G  LK   F +
Sbjct: 250 CVQNDDLRGGLELFKEMQKAGVGVSQSTFASVFRSCAGLSALRLGSQLHGHALKTD-FGT 308

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV +G A +DM++K + +L  A K+F+ +   N   +  +I     +G  R    L LD 
Sbjct: 309 DVVIGTATLDMYMKCN-NLSDAQKLFNSLPNHNLQSYNAII-----VGYARSDKGLGLDE 362

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +         +LSG   AC+ ++    G Q+H  ++++    ++CV  +++DMY KC   
Sbjct: 363 V---------SLSGAFRACAVIKGDLEGLQVHGLSMKSLCQSNICVANAILDMYGKC--- 410

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G++ ++  VF+ M+  + +SW AII  + Q+G  +K  + LF                  
Sbjct: 411 GALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNEEK-TLSLF------------------ 451

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
                          ++   +K    LD  VG +LI MY++ G ME A K  + L E+ +
Sbjct: 452 ---------------IHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQTV 496

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           VS+N ++  ++    SE+A +   ++ + GV    +T+A++L   +++  +  G+QIHA+
Sbjct: 497 VSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQ 556

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           IIK   +S+  I + L+ MYS+C N++    +F++  +R+ ++W +M+ G+A+HG    A
Sbjct: 557 IIKKELQSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFVTWNAMVCGYAQHGLGEEA 616

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           L+IF  M  + +KPN  T++AVL AC H GL+ +G  +F SM   +G+  ++EHY+C+VD
Sbjct: 617 LKIFEYMQLENVKPNHATFLAVLRACGHMGLVEKGLHYFHSMLSNYGLDPQLEHYSCVVD 676

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           ++GRSG +++ALE I  MP  AD ++WRT L  C++HG+ E+ + AA  IL+ +P+D AA
Sbjct: 677 IMGRSGQVSKALELIEGMPFEADAVIWRTLLSICKIHGNVEVAEKAAYSILQLEPEDSAA 736

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           ++LLSN+YA+AG W  V  +RK M+   L KE GCSWIE  ++VH F VG+ +HP++ EI
Sbjct: 737 YVLLSNIYANAGMWNEVTKLRKMMRFNGLKKEPGCSWIEIKSEVHAFLVGDKAHPRSKEI 796

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELE 782
           Y  LD L  ++K  GY+PDT+F+L++ E
Sbjct: 797 YENLDVLTDEMKWVGYMPDTDFILNDDE 824



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 170/634 (26%), Positives = 294/634 (46%), Gaps = 88/634 (13%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+S + + C   +    GK  H+ +  ++ +P   + N LI +Y KC DL  A K+F  M
Sbjct: 44  TFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKVFDGM 103

Query: 140 GNK------------------------------RDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +                              RD+VSW+S+IS Y++ G     I +F+
Sbjct: 104 PQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVFL 163

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M  +G   +   F+ V+++CS+ E+   G  I+G  +K G FD DV  G AL+DM+ K 
Sbjct: 164 QMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMG-FDCDVVTGSALLDMYAKC 222

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              L+ + + F  M EKN V W+ +I  C Q    R  + LF +M  +G    + T + V
Sbjct: 223 K-KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDLRGGLELFKEMQKAGVGVSQSTFASV 281

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
             +C+ L     G QLH  A++T    DV +G + +DMY KC    ++ D++K+F+ + +
Sbjct: 282 FRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCN---NLSDAQKLFNSLPN 338

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           HN+ S+ AII GY +S   DK             +  +  + +   +AC  +       Q
Sbjct: 339 HNLQSYNAIIVGYARS---DK------------GLGLDEVSLSGAFRACAVIKGDLEGLQ 383

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+  ++K     + CV N+++ MY + G + +A   FE +  ++ VS+N ++ A+ +N N
Sbjct: 384 VHGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGN 443

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            EK   L                                  IH RIIKS    +  +  A
Sbjct: 444 EEKTLSLF---------------------------------IHNRIIKSRLGLDSFVGIA 470

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MYS+C  +E A ++   + ++ V+SW ++I+GF+    +  A + F KML  G+ P+
Sbjct: 471 LIDMYSKCGMMEKAEKLHDRLAEQTVVSWNAIISGFSLQKQSEEAQKTFSKMLEMGVDPD 530

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
             TY  +L  C++   +  G K   +   +  +       + +VD+  + G++ +  + I
Sbjct: 531 NFTYATILDTCANLVTVELG-KQIHAQIIKKELQSDAYISSTLVDMYSKCGNMQD-FQLI 588

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
                + D + W   +     HG   LG+ A ++
Sbjct: 589 FEKAPNRDFVTWNAMVCGYAQHG---LGEEALKI 619



 Score =  207 bits (528), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 156/576 (27%), Positives = 262/576 (45%), Gaps = 56/576 (9%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           FS + + CS+ + +  G   +  ++    F   V V   LI M++K S DLE A+KVFD 
Sbjct: 45  FSHIFQECSDRKALCPGKQAHARMI-LTEFKPTVFVTNCLIQMYIKCS-DLEFAFKVFDG 102

Query: 243 MTEKNTVGWTLM-------------------------------ITRCTQLGCPRDAIRLF 271
           M +++TV W  M                               I+     G  R  I +F
Sbjct: 103 MPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVIDVF 162

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           L M   G + DR T + V+ +CS LE    G Q+H  A++ G   DV  G +L+DMYAKC
Sbjct: 163 LQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQIHGLAVKMGFDCDVVTGSALLDMYAKC 222

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
                +D S + F  M + N +SW+AII G VQ+    +  ++LF +M +  V  +  TF
Sbjct: 223 K---KLDCSIQFFHSMPEKNWVSWSAIIAGCVQNDDL-RGGLELFKEMQKAGVGVSQSTF 278

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           ASV ++C  L    +  Q++ HA+K     D  +G + + MY +   + DA+K F SL  
Sbjct: 279 ASVFRSCAGLSALRLGSQLHGHALKTDFGTDVVIGTATLDMYMKCNNLSDAQKLFNSLPN 338

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            NL SYN ++  YA++              D G+G    + +      + I    +G Q+
Sbjct: 339 HNLQSYNAIIVGYARS--------------DKGLGLDEVSLSGAFRACAVIKGDLEGLQV 384

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   +KS  +SN C+ NA++ MY +C  +  A  VF+EM  R+ +SW ++I    ++G  
Sbjct: 385 HGLSMKSLCQSNICVANAILDMYGKCGALVEACLVFEEMVSRDAVSWNAIIAAHEQNGNE 444

Query: 572 ARALEIFY--KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
            + L +F   +++   +  +    IA++   S  G++ +  K    + ++   V      
Sbjct: 445 EKTLSLFIHNRIIKSRLGLDSFVGIALIDMYSKCGMMEKAEKLHDRLAEQ--TVVSWNAI 502

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
                L  +S    +    +  M +  D   + T L  C      ELGK     I++++ 
Sbjct: 503 ISGFSLQKQSEEAQKTFSKMLEMGVDPDNFTYATILDTCANLVTVELGKQIHAQIIKKEL 562

Query: 690 Q-DPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           Q D      L ++Y+  G+ +    I ++   R+ +
Sbjct: 563 QSDAYISSTLVDMYSKCGNMQDFQLIFEKAPNRDFV 598



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 55/233 (23%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T   TF+ +    S   A+  G+Q HAR+I + F+    + N LI MY +C+++E AF+V
Sbjct: 40  TKKKTFSHIFQECSDRKALCPGKQAHARMILTEFKPTVFVTNCLIQMYIKCSDLEFAFKV 99

Query: 547 FKEMEDRNVISWTSMITGFAKHG--------FAA-----------------------RAL 575
           F  M  R+ +SW +M+ G+A  G        F A                       + +
Sbjct: 100 FDGMPQRDTVSWNAMLFGYAGRGDIGVAQKLFDAMPERDVVSWNSLISGYLHNGDHRKVI 159

Query: 576 EIFYKMLADGIKPNGITYIAVLSACS----HAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
           ++F +M   G   +  T+  VL +CS    H G I             HG+  +M  + C
Sbjct: 160 DVFLQMGRMGTVFDRTTFAVVLKSCSSLEDHGGGIQ-----------IHGLAVKM-GFDC 207

Query: 632 -------MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
                  ++D+  +   L  +++F  SMP   + + W   +  C  + D   G
Sbjct: 208 DVVTGSALLDMYAKCKKLDCSIQFFHSMP-EKNWVSWSAIIAGCVQNDDLRGG 259


>gi|449435936|ref|XP_004135750.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 238/723 (32%), Positives = 410/723 (56%), Gaps = 7/723 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+   A+     M   G  PD  T+  ++K+C   ++  +GK+VH  +    L+ +  + 
Sbjct: 37  GQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG 96

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SLI LY++ G L++A  +F ++  K D V W+ M++ YV  G   +AI +F+EM     
Sbjct: 97  SSLIKLYAENGHLSDAQYLFDNIPQK-DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEI 155

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F+ V+  C++   + +G  ++G  + CG  + D  V   L+ M+ K    L++A
Sbjct: 156 KPNSVTFACVLSVCASEAMLDLGTQLHGIAVSCG-LELDSPVANTLLAMYSKCQC-LQAA 213

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+FD   + + V W  +I+   Q G   +A  LF  MI +G  PD  T +  +   +EL
Sbjct: 214 RKLFDTSPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNEL 273

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                 K++H + IR  + LDV +  +L+D+Y KC     V+ ++K+  +    + +  T
Sbjct: 274 LSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR---DVEMAQKILCQSSSFDTVVCT 330

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I+GYV +G ++KEA++ F  ++Q ++ P   TF+S+  A   L   N+ ++++   +K
Sbjct: 331 TMISGYVLNG-KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                   VG++++ MYA+ GR++ A + F  + EK+ + +N+M+ + ++N    +A  L
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             ++   G      + +  LS  +++ A+  G++IH  +IK    S+    ++LI MY++
Sbjct: 450 FRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAK 509

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C N+  + +VF  M++RN +SW S+I+ +  HG     L +F++ML +GI+P+ +T++ +
Sbjct: 510 CGNLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGI 569

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           +SAC HAG + EG +++  M +E+GI  RMEHYAC+ D+ GR+G L EA E I SMP   
Sbjct: 570 ISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLDEAFETINSMPFPP 629

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  VW T LGAC +HG+ EL + A++ + + DP +   ++LL+N+ A AG W  V  +R 
Sbjct: 630 DAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRS 689

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            MKER + K  G SWIE +N  H F   + SHP T +IY+ LD L L++K+ GY+P    
Sbjct: 690 IMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYL 749

Query: 777 VLH 779
            +H
Sbjct: 750 PMH 752



 Score =  236 bits (601), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 282/552 (51%), Gaps = 9/552 (1%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y + G L +A  +F ++       +W+ MI  +   G+   A+  +++ML  G  P++Y
Sbjct: 1   MYVRTGSLKDAKNLFYTL-QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKY 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F  V++AC   ++V +G I++  +   G    DV VG +LI ++ +    L  A  +FD
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMG-LKEDVFVGSSLIKLYAENG-HLSDAQYLFD 117

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            + +K++V W +M+    + G   +AI++FL+M  S   P+  T + V+S C+   +   
Sbjct: 118 NIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G QLH  A+  GL LD  V  +L+ MY+KC     +  +RK+FD     +++SW  II+G
Sbjct: 178 GTQLHGIAVSCGLELDSPVANTLLAMYSKCQC---LQAARKLFDTSPQSDLVSWNGIISG 234

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           YVQ+G    EA  LF  MI   + P+  TFAS L     LL     ++++ + ++    L
Sbjct: 235 YVQNGLMG-EAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL 293

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  + ++LI +Y +   +E A+K        + V   TM+  Y  N  +++A E    + 
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKILCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLV 353

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              +  ++ TF+S+    + + A+  G+++H  IIK+  +    + +A++ MY++C  ++
Sbjct: 354 QERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLD 413

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF  + +++ I W SMIT  +++G    A+ +F +M  +G + + ++    LSAC+
Sbjct: 414 LACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACA 473

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           +   +  G K    +  +  +   +   + ++D+  + G+L  +      M    +V  W
Sbjct: 474 NLPALHYG-KEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQERNEV-SW 531

Query: 662 RTFLGACRVHGD 673
            + + A   HGD
Sbjct: 532 NSIISAYGNHGD 543



 Score =  116 bits (291), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 133/242 (54%), Gaps = 4/242 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G+ ++A+     + Q+   P   T+S +  +       +LGK +H  + ++KL+ 
Sbjct: 336 YVLN-GKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDE 394

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              + ++++ +Y+KCG L+ A ++F  +  ++D + W+SMI+S    G+  +AI++F +M
Sbjct: 395 KCHVGSAILDMYAKCGRLDLACRVFNRI-TEKDAICWNSMITSCSQNGRPGEAINLFRQM 453

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G   +    S  + AC+N   +  G  I+G ++K G   SD+    +LIDM+ K   
Sbjct: 454 GMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIK-GPLRSDLYAESSLIDMYAKCG- 511

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L  + +VFD+M E+N V W  +I+     G  ++ + LF +M+ +G  PD  T  G++S
Sbjct: 512 NLNFSRRVFDRMQERNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIIS 571

Query: 292 AC 293
           AC
Sbjct: 572 AC 573



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 100/210 (47%), Gaps = 13/210 (6%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +GR  +AI     M  +G   D  + S  L +C      H GK +H L+ +  L  +  
Sbjct: 439 QNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLY 498

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
             +SLI +Y+KCG+LN + ++F  M  +R+ VSW+S+IS+Y N G   + + +F EML  
Sbjct: 499 AESSLIDMYAKCGNLNFSRRVFDRM-QERNEVSWNSIISAYGNHGDLKECLALFHEMLRN 557

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-----FDSDVCVGCALIDMFVKG 229
           G  P+   F  +I AC +   V  G I Y  L+   Y      +   CV     DMF + 
Sbjct: 558 GIQPDHVTFLGIISACGHAGQVDEG-IRYYHLMTEEYGIPARMEHYACVA----DMFGRA 612

Query: 230 SVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
              L+ A++  + M      G W  ++  C
Sbjct: 613 G-RLDEAFETINSMPFPPDAGVWGTLLGAC 641


>gi|414872095|tpg|DAA50652.1| TPA: hypothetical protein ZEAMMB73_776700 [Zea mays]
          Length = 647

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 222/581 (38%), Positives = 349/581 (60%), Gaps = 10/581 (1%)

Query: 282 DRFTLSGVVSACSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           DRFT + ++ A ++L  F + + L      R  ++ ++ +G      Y K   +G ++ +
Sbjct: 76  DRFTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIG-----GYVK---NGDLETA 127

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           RK+FD M   NV +W A++ G   SG  ++E++  F  M +  + P+ +   S+ + C  
Sbjct: 128 RKLFDEMPARNVATWNAMVAGLTNSG-LNEESLGFFFAMRREGMQPDEYGLGSLFRCCAG 186

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L D     QV+ + V+ G   D CVG+SL  MY R G + D   A  +L   N+VS NT 
Sbjct: 187 LRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTT 246

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +    +N ++E A E    +   GV  +A TF S ++  S + A+ +G+QIHA  IK+G 
Sbjct: 247 ISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTGV 306

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
           +    +  +L+ MYSRC  +  + +V  E    +++  ++MI+ +  HG   +A+ +F +
Sbjct: 307 DKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQ 366

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M+A G +PN +T++ +L ACSH+GL  EG   F  M   +G+   ++HY C+VDLLGRSG
Sbjct: 367 MMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSG 426

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            L EA + I SMP+  D ++W+T L AC+     ++ +  AE ++E DP D A+++LLSN
Sbjct: 427 CLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAERVIELDPHDSASYVLLSN 486

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           + A++  WE V+ +R+ M+E+N+ KE G SW+E   ++H+F  G+ SH +  EI   L++
Sbjct: 487 IRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCTGDESHSRQREIVECLEE 546

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +  +I++ GY PD + V H++E+E+K   L  HSEK+A+AF  +S  +  PIRV KNLRV
Sbjct: 547 MMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAFLSLPEGVPIRVMKNLRV 606

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           C DCH AIK +S V GREIV+RD +RFHH KDGKCSC DYW
Sbjct: 607 CDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 647



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 163/345 (47%), Gaps = 9/345 (2%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI  +VK   DLE+A K+FD+M  +N   W  M+   T  G   +++  F  M   G  P
Sbjct: 114 LIGGYVKNG-DLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQP 172

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D + L  +   C+ L    SG+Q+H++ +R+GL  D+CVG SL  MY +C   G + D  
Sbjct: 173 DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC---GFLRDGE 229

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKE-AVKLFSDMIQGQVAPNHFTFASVLKACGN 400
                +   N++S    I+G  Q+G  D E A++ F  M    V  N  TF S + +C +
Sbjct: 230 AALRALPSLNIVSCNTTISGRTQNG--DAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 287

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L      +Q++  A+K G      V  SL+ MY+R G + D+ +        +LV  + M
Sbjct: 288 LAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAM 347

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-G 519
           + AY  + + +KA  L  ++   G   +  TF +LL   S  G   +G      + K+ G
Sbjct: 348 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYG 407

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMIT 563
            + +   Y  ++ +  R   +  A  +   M  + + + W ++++
Sbjct: 408 LQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 452



 Score =  136 bits (342), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 147/289 (50%), Gaps = 11/289 (3%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N LI  Y K GDL  A K+F  M   R++ +W++M++   N G   +++  F  M
Sbjct: 107 NVMSWNILIGGYVKNGDLETARKLFDEM-PARNVATWNAMVAGLTNSGLNEESLGFFFAM 165

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+EY   ++ R C+   +V  G  ++ ++++ G  D D+CVG +L  M+++   
Sbjct: 166 RREGMQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGF 224

Query: 232 --DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             D E+A +    +   N V     I+  TQ G    A+  F  M  +G   +  T    
Sbjct: 225 LRDGEAALRALPSL---NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSA 281

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           V++CS+L     G+Q+H+ AI+TG+   V V  SLV MY++C   G + DS +V      
Sbjct: 282 VTSCSDLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRC---GCLGDSERVCLEYSG 338

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +++  +A+I+ Y    G  ++AV LF  M+     PN  TF ++L AC
Sbjct: 339 TDLVLCSAMISAY-GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYAC 386



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/313 (23%), Positives = 141/313 (45%), Gaps = 40/313 (12%)

Query: 365 SGGRDKEAV-KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           S GR KEA+ + F + +  +       F+ + +AC  L    +  Q++  A   G A D 
Sbjct: 25  STGRVKEALHRRFREGLWSEPG----LFSHIFRACQAL---PLLRQLHAFAATSGAAADR 77

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
              N L+  YA  G    AR  FE + ++N++S+N ++  Y KN + E A +L  E+   
Sbjct: 78  FTANHLLLAYADLGDFPTARGLFERIPKRNVMSWNILIGGYVKNGDLETARKLFDEMPAR 137

Query: 484 GVGT-------------------------------SAYTFASLLSGASSIGAIGKGEQIH 512
            V T                                 Y   SL    + +  +  G Q+H
Sbjct: 138 NVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDVVSGRQVH 197

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           A +++SG + + C+ ++L  MY RC  +       + +   N++S  + I+G  ++G A 
Sbjct: 198 AYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSLNIVSCNTTISGRTQNGDAE 257

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
            ALE F  M   G++ N +T+++ +++CS    +++G +   ++  + G+ + +     +
Sbjct: 258 GALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQG-QQIHALAIKTGVDKVVPVMTSL 316

Query: 633 VDLLGRSGSLTEA 645
           V +  R G L ++
Sbjct: 317 VHMYSRCGCLGDS 329



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 58/428 (13%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P  +    N ++  L N G  ++++     M ++G  PD      L + C   R+ 
Sbjct: 131 FDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDV 190

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G+ VH+ + RS L+ +  + +SL  +Y +CG L +     +++ +  +IVS ++ IS 
Sbjct: 191 VSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPSL-NIVSCNTTISG 249

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
               G    A+  F  M   G   N   F + + +CS+   +A G  I+   +K G  D 
Sbjct: 250 RTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTG-VDK 308

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            V V  +L+ M+ +    L  + +V  + +  + V  + MI+     G  + A+ LF  M
Sbjct: 309 VVPVMTSLVHMYSRCGC-LGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQM 367

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           + +G  P+  T   ++ ACS           HS                           
Sbjct: 368 MAAGAEPNEVTFLTLLYACS-----------HS--------------------------- 389

Query: 335 GSVDDSRKVFDRM-----LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           G  D+    F+ M     L  +V  +T I+    +SG  + EA  L   M    V P+  
Sbjct: 390 GLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLN-EAEDLILSM---PVQPDGV 445

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALD--DCVGNSLIS-MYARSGRMEDARKAF 446
            + ++L AC      ++AE++    ++    LD  D     L+S + A S R ED  K  
Sbjct: 446 IWKTLLSACKTQKKFDMAERIAERVIE----LDPHDSASYVLLSNIRATSSRWEDVSKVR 501

Query: 447 ESLFEKNL 454
           E++ E+N+
Sbjct: 502 ETMREQNV 509


>gi|413954823|gb|AFW87472.1| hypothetical protein ZEAMMB73_326917 [Zea mays]
          Length = 610

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 217/574 (37%), Positives = 349/574 (60%), Gaps = 7/574 (1%)

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++ C        G+Q+H+  +  G    + +   LV MYA+C   G+++D+  V D M +
Sbjct: 42  ITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARC---GALEDAHNVLDGMPE 98

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVA 407
            NV+SWTA+I+GY Q+  R  EA  LF  M++    PN FT ASVL +C     +  +  
Sbjct: 99  RNVVSWTAMISGYSQNE-RPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQI 157

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           +QV+  A+K+   L   VG+SL+ MYARS  +++AR+ F+ L  +++VSY T++  Y + 
Sbjct: 158 KQVHAFAIKKNFELHMFVGSSLLDMYARSENIQEARRVFDMLPARDVVSYTTILSGYTRL 217

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              E+A  L  ++ + G+  +  TF+ LL+  S + ++  G+Q+H  I++        + 
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 277

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           N+LI MYS+C  +  + +VF  M +R+V+SW +M+ G+ +HG A   +++F + + D +K
Sbjct: 278 NSLIDMYSKCGKLLYSRRVFDNMPERSVVSWNAMLMGYGRHGMAYEVVQLF-RFMCDKVK 336

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+ +T +AVL   SH GL+ EG   F  +  E   +   +HY C++DLLGRSG L +AL 
Sbjct: 337 PDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGCVIDLLGRSGQLEKALL 396

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I+ MP      +W + LGACRVH +  +G+  A+ + + +P++   +++LSN+YA+A  
Sbjct: 397 LIQKMPFQPTRAIWGSLLGACRVHANVHVGEFVAQKLFDIEPENAGNYVILSNIYAAARM 456

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           W+ V  +RK M ++ +IKE G SW+  D  +H FH  E  HP+  +I  +++++   IK 
Sbjct: 457 WKDVFRLRKLMLKKTVIKEPGRSWMILDKVIHTFHSSERFHPRKEDINVKINEIYAAIKA 516

Query: 768 FGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
            G++PD + VLH++++EQK + L  HSEK+A+ FGL+ST     I+V KNLR+C DCH  
Sbjct: 517 AGFVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNF 576

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K++S V GREI LRD NRFH I +G C+C DYW
Sbjct: 577 AKFVSKVYGREISLRDKNRFHLITEGACTCGDYW 610



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 110/367 (29%), Positives = 199/367 (54%), Gaps = 15/367 (4%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y   +  C+  R    G+ VH+ +  +   P   +   L+ +Y++CG L +A+ +   M 
Sbjct: 38  YDAAITECVGRRALREGRQVHARMVTAGYRPALYLATRLVIMYARCGALEDAHNVLDGM- 96

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            +R++VSW++MIS Y    +  +A  +F+ ML  G  PNE+  ++V+ +C+ ++ +    
Sbjct: 97  PERNVVSWTAMISGYSQNERPAEAWDLFIMMLRAGCEPNEFTLASVLTSCTGSQGIHQHQ 156

Query: 201 I--IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           I  ++ F +K   F+  + VG +L+DM+ + S +++ A +VFD +  ++ V +T +++  
Sbjct: 157 IKQVHAFAIKKN-FELHMFVGSSLLDMYAR-SENIQEARRVFDMLPARDVVSYTTILSGY 214

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           T+LG   +A+ LF  +   G   ++ T S +++A S L     GKQ+H   +R  L   +
Sbjct: 215 TRLGLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFM 274

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +  SL+DMY+KC   G +  SR+VFD M + +V+SW A++ GY +  G   E V+LF  
Sbjct: 275 ALQNSLIDMYSKC---GKLLYSRRVFDNMPERSVVSWNAMLMGYGRH-GMAYEVVQLFRF 330

Query: 379 MIQGQVAPNHFTFASVL--KACGNLLDSNVAEQVYTHAVKRGRALDDCVG-NSLISMYAR 435
           M   +V P+  T  +VL   + G L+D  +   ++ H VK    L +      +I +  R
Sbjct: 331 MCD-KVKPDSVTLLAVLLGYSHGGLVDEGL--DMFDHIVKEQSTLLNTQHYGCVIDLLGR 387

Query: 436 SGRMEDA 442
           SG++E A
Sbjct: 388 SGQLEKA 394



 Score = 59.7 bits (143), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 6/204 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     +  +G   +  T+S+LL +     +   GK VH L+ R +L     + 
Sbjct: 218 GLDEEALNLFRQLYNEGMQCNQVTFSVLLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 277

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI +YSKCG L  + ++F +M  +R +VSW++M+  Y   G   + + +F  M +   
Sbjct: 278 NSLIDMYSKCGKLLYSRRVFDNM-PERSVVSWNAMLMGYGRHGMAYEVVQLFRFMCD-KV 335

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLES 235
            P+     AV+   S+   V  G  ++  ++K      +    GC +ID+  + S  LE 
Sbjct: 336 KPDSVTLLAVLLGYSHGGLVDEGLDMFDHIVKEQSTLLNTQHYGC-VIDLLGR-SGQLEK 393

Query: 236 AYKVFDKMTEKNTVG-WTLMITRC 258
           A  +  KM  + T   W  ++  C
Sbjct: 394 ALLLIQKMPFQPTRAIWGSLLGAC 417


>gi|302816964|ref|XP_002990159.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
 gi|300142014|gb|EFJ08719.1| hypothetical protein SELMODRAFT_131170 [Selaginella moellendorffii]
          Length = 849

 Score =  445 bits (1144), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 267/813 (32%), Positives = 434/813 (53%), Gaps = 27/813 (3%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK-LEPN 112
           L+D  V++ + +L+   QK    D   Y  LLK   +S +    K + + ++ SK    +
Sbjct: 59  LSDEDVKQKLASLEEQNQKSGFVDPAAYVSLLK---QSGDVTALKTIQAHISHSKRFAGD 115

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++LN ++  Y KCG + +A  +F S+ +  ++ SW+ ++++Y   G     + +  +M 
Sbjct: 116 RLLLNCVVEAYGKCGCVKDARLVFSSIRHP-NVYSWTILLAAYAQNGHHKTVLELLRQMD 174

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            LG  PN    + VI A S   N      I+           DV +  ALIDM+ K   D
Sbjct: 175 LLGVWPNAVTLATVIGAVSELGNWDEARKIHARAAATCQLTYDVVLVTALIDMYAKCG-D 233

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A  VFD+   K+      MI+   QLG   DA+  F  +  SG  P++ T + +  A
Sbjct: 234 IFHAEVVFDQARNKDLACCNAMISAYIQLGYTVDAVSTFNRIQPSGLQPNQVTYALLFRA 293

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+   +++  +  H   I + L  DV V  +LV MY++C   GS++D+R+VFDRM   NV
Sbjct: 294 CATNGVYSDARVAHMCFILSKLRPDVVVNTALVSMYSRC---GSLEDARRVFDRMPGKNV 350

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W  +I GY Q G  D EA++L+  M    V P+  TF +VL++C           ++ 
Sbjct: 351 VTWNVMIAGYAQEGYTD-EALQLYVSMEAAGVEPDEITFVNVLESCSLAEHLAAGRDIHK 409

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNS 470
           H V  G      V ++LI+MY+  G + DA   F        +++S+  M+ A  +N   
Sbjct: 410 HVVDAGYDSSLTVLSALITMYSACGSLGDAVDVFHKGVTTHSSVISWTAMLTALTRNGEG 469

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
             A  L  +++  GV  +  TF S +   SSIGA+ +G  I  R+I +G   +  +  +L
Sbjct: 470 RSALALFRKMDLEGVRANVVTFVSTIDACSSIGALVEGHAIFERVIVTGHLIDVVLGTSL 529

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           I++Y +C  ++ A +VF  +  +N+++W +++   +++G    + E+  +M  DG +PN 
Sbjct: 530 INLYGKCGRLDYALEVFHYLSFKNIVTWNTILAASSQNGEETLSDELLQEMDLDGAQPNE 589

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           +T + +L  CSH GL+++   +FRSM   H +V   EHY C+VDLLGRSG L E   FI 
Sbjct: 590 MTLLNMLFGCSHNGLVAKAVSYFRSMVYGHCLVPTSEHYGCLVDLLGRSGQLEEVEAFIS 649

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           S P S D ++W + LG+C +H D E G  AA  +L  DP++ + ++LLSN++A+ G  + 
Sbjct: 650 SKPFSLDSVLWMSLLGSCVIHSDVERGLRAARRVLGLDPKNASPYVLLSNMFAAIGMLDA 709

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           V ++ K   ER + KE   S+IE +  VH+F V    H    +I A+L + + +++E G+
Sbjct: 710 VKSLAKLAGERAMKKEQSRSYIEVNGVVHEFGVRAGLHRLGEKIGAQLREWSEEMEEAGF 769

Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           +P     LH++           H EK+A+AFG IS+    P+ V KNLR+C  CH  IK+
Sbjct: 770 VP-----LHDVRG--------YHDEKLAIAFGAISSPPGVPLFVVKNLRMCVCCHGEIKH 816

Query: 831 ISMVTGREIVLRDSNRFHHIK--DGKCSCNDYW 861
           I  +TGR+I +R+ NR HH +  D  CSC DYW
Sbjct: 817 ICKMTGRDISVREGNRVHHFRPMDASCSCGDYW 849


>gi|125577630|gb|EAZ18852.1| hypothetical protein OsJ_34389 [Oryza sativa Japonica Group]
          Length = 587

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 239/591 (40%), Positives = 348/591 (58%), Gaps = 7/591 (1%)

Query: 274 MILSGFLPDRFTL-SGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKC 331
           M+  G  P+ FT  S   +A S     T G Q+HS AIR G L +D  V C+ +DMY K 
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFK- 59

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              G +  +R +F  M + NV++W A++T  V  G R  E ++ +  + +    PN  + 
Sbjct: 60  --TGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDG-RPLETIEAYFGLREAGGLPNVVSA 116

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            +   AC   +  ++ EQ +   VK G  +D  V NS++  Y +      AR  F+ +  
Sbjct: 117 CAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGKARAVFDGMGV 176

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +N VS+ +MV AYA+N   E+AF        +G   + +  +S L+  + +  +  G  +
Sbjct: 177 RNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRAL 236

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA  ++S  ++N  + +AL+ MY +C  VE A Q+F E   RN+++W +MI G+A  G A
Sbjct: 237 HAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGDA 296

Query: 572 ARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             AL +F  M+  G   PN IT + V+++CS  GL  +G++ F +M +  GI  R EHYA
Sbjct: 297 QNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHYA 356

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           C+VDLLGR+G   +A E I+ MP+   + VW   LGAC++HG TELG+ AAE + E DPQ
Sbjct: 357 CVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHGKTELGRIAAEKLFELDPQ 416

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D   H+LLSN++ASAG W    +IRK MK   + K+ GCSW+   N VH F   +T H  
Sbjct: 417 DSGNHVLLSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSWVTWKNVVHVFRAKDTKHEM 476

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             EI A L +L  +++  GY+PDT + L++LEEE+K   +FQHSEK+A+AFGLI      
Sbjct: 477 YNEIQALLSKLRKQMQAAGYMPDTQYSLYDLEEEEKESEVFQHSEKLALAFGLICIPPGV 536

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           PIR+ KNLR+C DCH A K+IS + GREI++RD+NRFHH K  +CSC DYW
Sbjct: 537 PIRIMKNLRICVDCHRAFKFISGIVGREIIVRDNNRFHHFKQYQCSCGDYW 587



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 193/403 (47%), Gaps = 9/403 (2%)

Query: 171 MLELGFCPNEYCF-SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           ML LG  PN++ F SA   A S      IG  I+   ++ GY   D  V CA +DM+ K 
Sbjct: 1   MLRLGLRPNDFTFPSAFKAAASAPPRSTIGPQIHSLAIRFGYLPVDPFVSCAALDMYFK- 59

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +  L+ A  +F +M  +N V W  ++T     G P + I  +  +  +G LP+  +    
Sbjct: 60  TGRLKLARHLFGEMPNRNVVAWNAVMTNAVLDGRPLETIEAYFGLREAGGLPNVVSACAF 119

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
            +AC+     + G+Q H + ++ G  +DV V  S+VD Y KC   G    +R VFD M  
Sbjct: 120 FNACAGAMYLSLGEQFHGFVVKCGFEMDVSVLNSMVDFYGKCRCAGK---ARAVFDGMGV 176

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            N +SW +++  Y Q+G  ++EA   +    +    P  F  +S L  C  LL  ++   
Sbjct: 177 RNSVSWCSMVAAYAQNGA-EEEAFAAYLGARRSGEEPTDFMVSSALTTCAGLLGLHLGRA 235

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++  AV+     +  V ++L+ MY + G +EDA + F    ++NLV++N M+  YA   +
Sbjct: 236 LHAVAVRSCIDANIFVASALVDMYGKCGCVEDAEQIFYETPQRNLVTWNAMIGGYAHIGD 295

Query: 470 SEKAFELLHEIEDTGVGTSAY-TFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIY 527
           ++ A  +  ++  +G     Y T  ++++  S  G    G ++   + +  G E     Y
Sbjct: 296 AQNALLVFDDMIRSGETAPNYITLVNVITSCSRGGLTKDGYELFETMRERFGIEPRTEHY 355

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHG 569
             ++ +  R    E A++V + M  R  IS W +++     HG
Sbjct: 356 ACVVDLLGRAGMEEQAYEVIQGMPMRPSISVWGALLGACKMHG 398



 Score =  158 bits (400), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 226/490 (46%), Gaps = 71/490 (14%)

Query: 96  LGKLVHSLLTRSKLEP-NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           +G  +HSL  R    P +  +  + + +Y K G L  A  +F  M N R++V+W++++++
Sbjct: 29  IGPQIHSLAIRFGYLPVDPFVSCAALDMYFKTGRLKLARHLFGEMPN-RNVVAWNAVMTN 87

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            V  G+ ++ I  +  + E G  PN     A   AC+    +++G   +GF++KCG F+ 
Sbjct: 88  AVLDGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCG-FEM 146

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           DV V  +++D + K       A  VFD M  +N+V W  M+    Q G   +A   +L  
Sbjct: 147 DVSVLNSMVDFYGKCRC-AGKARAVFDGMGVRNSVSWCSMVAAYAQNGAEEEAFAAYLGA 205

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             SG  P  F +S  ++ C+ L     G+ LH+ A+R+ +  ++ V  +LVDMY KC   
Sbjct: 206 RRSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKC--- 262

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFAS 393
           G V+D+ ++F      N+++W A+I GY    G  + A+ +F DMI+ G+ APN+ T  +
Sbjct: 263 GCVEDAEQIFYETPQRNLVTWNAMIGGYAHI-GDAQNALLVFDDMIRSGETAPNYITLVN 321

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           V+ +C                                   +R G  +D  + FE++ E+ 
Sbjct: 322 VITSC-----------------------------------SRGGLTKDGYELFETMRERF 346

Query: 454 LVS-----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS-----GASSIG 503
            +      Y  +VD   +    E+A+E+   I+   +  S   + +LL      G + +G
Sbjct: 347 GIEPRTEHYACVVDLLGRAGMEEQAYEV---IQGMPMRPSISVWGALLGACKMHGKTELG 403

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV-------- 555
            I   +        SG   NH +   L +M++       A  + KEM++  +        
Sbjct: 404 RIAAEKLFELDPQDSG---NHVL---LSNMFASAGRWAEATDIRKEMKNVGIKKDPGCSW 457

Query: 556 ISWTSMITGF 565
           ++W +++  F
Sbjct: 458 VTWKNVVHVF 467



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/251 (26%), Positives = 124/251 (49%), Gaps = 4/251 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           DGR  + I     + + G  P++ +      +C  +    LG+  H  + +   E +  +
Sbjct: 91  DGRPLETIEAYFGLREAGGLPNVVSACAFFNACAGAMYLSLGEQFHGFVVKCGFEMDVSV 150

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
           LNS++  Y KC    +A  +F  MG  R+ VSW SM+++Y   G + +A   ++     G
Sbjct: 151 LNSMVDFYGKCRCAGKARAVFDGMG-VRNSVSWCSMVAAYAQNGAEEEAFAAYLGARRSG 209

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
             P ++  S+ +  C+    + +G  ++   ++    D+++ V  AL+DM+ K    +E 
Sbjct: 210 EEPTDFMVSSALTTCAGLLGLHLGRALHAVAVR-SCIDANIFVASALVDMYGKCGC-VED 267

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACS 294
           A ++F +  ++N V W  MI     +G  ++A+ +F DMI SG   P+  TL  V+++CS
Sbjct: 268 AEQIFYETPQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITSCS 327

Query: 295 ELELFTSGKQL 305
              L   G +L
Sbjct: 328 RGGLTKDGYEL 338



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 94/194 (48%), Gaps = 4/194 (2%)

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN 130
           + G  P     S  L +C      HLG+ +H++  RS ++ N  + ++L+ +Y KCG + 
Sbjct: 207 RSGEEPTDFMVSSALTTCAGLLGLHLGRALHAVAVRSCIDANIFVASALVDMYGKCGCVE 266

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRA 189
           +A +IF     +R++V+W++MI  Y + G   +A+ +F +M+  G   PN      VI +
Sbjct: 267 DAEQIFYET-PQRNLVTWNAMIGGYAHIGDAQNALLVFDDMIRSGETAPNYITLVNVITS 325

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
           CS       G+ ++  + +    +        ++D+  +  ++ E AY+V   M  + ++
Sbjct: 326 CSRGGLTKDGYELFETMRERFGIEPRTEHYACVVDLLGRAGME-EQAYEVIQGMPMRPSI 384

Query: 250 G-WTLMITRCTQLG 262
             W  ++  C   G
Sbjct: 385 SVWGALLGACKMHG 398


>gi|347954534|gb|AEP33767.1| organelle transcript processing 82, partial [Matthiola incana]
          Length = 694

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 244/657 (37%), Positives = 388/657 (59%), Gaps = 41/657 (6%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD + E N + W  M         P  A++L+L MI  G LPD +T   ++ +C++
Sbjct: 42  AISVFDTIQEPNLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAK 101

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD---------- 345
            ++   G+Q+H   ++ G  LD+ V  SL+ MYA+   +G ++D+RKVFD          
Sbjct: 102 SKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQ---NGRLEDARKVFDISSHRDVVSY 158

Query: 346 -----------------RMLDH----NVMSWTAIITGYVQSGGRDKEAVKLFSD-MIQGQ 383
                            ++ D     +V+SW A+I+GYV++G   KEA++LF + M+   
Sbjct: 159 TALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVETGNY-KEALELFKEMMMMTN 217

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           V P+  T  +V+ AC       +   V++     G A +  + N+LI +Y++ G +E A 
Sbjct: 218 VRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETAC 277

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
           + F+ L+ K+++S+NT++  Y      ++A  L  E+  +G   +  T  S+L   + +G
Sbjct: 278 ELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLG 337

Query: 504 AIGKGEQIHARIIK--SGFESN-HCIYNALISMYSRCANVEAAFQVF-KEMEDRNVISWT 559
           AI  G  IH  I K   G  +N   +  +LI MY++C +++AA QVF   M +R++ +W 
Sbjct: 338 AIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWN 397

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI+GFA HG A  A +IF +M  +GI+P+ IT++ +LSACSH+G++  G   FRSM   
Sbjct: 398 AMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMTRG 457

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           + I  ++EHY CM+DLLG SG   EA E I +MP+  D ++W + L AC++HG+ ELG+ 
Sbjct: 458 YEITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELGES 517

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA-GCSWIEADNKV 738
            A+ +++ +P +  +++LLSN+YA+AG W  VA IR  + ++ + K+  GCS IE D+ V
Sbjct: 518 FAKKLIKIEPGNSGSYVLLSNIYAAAGRWNEVAKIRALLNDKGMKKKVPGCSSIEIDSVV 577

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
           H+F +G+  HP+  EIY  L+++ + ++E G++PDT+ VL E+EEE +   L  HSEK+A
Sbjct: 578 HEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWREGALRHHSEKLA 637

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
           +AFGLIST     + + KNLRVC +CH A K IS +  REI+ RD  RF H +DG C
Sbjct: 638 IAFGLISTKPGTKLTIMKNLRVCKNCHEATKLISKIYKREIIARDRTRFXHFRDGVC 694



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 138/522 (26%), Positives = 258/522 (49%), Gaps = 48/522 (9%)

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           +++ W++M   +      V A+ +++ M+ LG  P+ Y F  ++++C+ ++    G  I+
Sbjct: 53  NLLIWNTMFRGHALSSDPVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIH 112

Query: 204 GFLLKCGYFDSDVCVGCALIDMF---------------------------VKGSVD---L 233
           G +LK G FD D+ V  +LI M+                           + G V    +
Sbjct: 113 GHVLKLG-FDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYI 171

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD-MILSGFLPDRFTLSGVVSA 292
           ESA K+FD++  K+ V W  MI+   + G  ++A+ LF + M+++   PD  T+  VVSA
Sbjct: 172 ESAQKLFDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSA 231

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ +    G+ +HSW    G A ++ +  +L+D+Y+K    G V+ + ++FD + + +V
Sbjct: 232 CAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF---GEVETACELFDGLWNKDV 288

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW  +I GY       KEA+ LF +M++    PN  T  S+L AC +L   ++   ++ 
Sbjct: 289 ISWNTLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHV 347

Query: 413 HAVKRGRALDDCVGN---SLISMYARSGRMEDARKAFE-SLFEKNLVSYNTMVDAYAKNL 468
           +  K+ + +   V +   SLI MYA+ G ++ A++ F+ S+  ++L ++N M+  +A + 
Sbjct: 348 YINKKLKGVVTNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHG 407

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI-- 526
            +  AF++   +   G+     TF  LLS  S  G +  G  I  R +  G+E    +  
Sbjct: 408 RANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGRNIF-RSMTRGYEITPKLEH 466

Query: 527 YNALISMYSRCANVEAAFQVFKE--MEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
           Y  +I +       + A ++     ME   VI W S++     HG      E F K L  
Sbjct: 467 YGCMIDLLGHSGLFKEAEEMINTMPMEPDGVI-WCSLLKACKIHGNLELG-ESFAKKLIK 524

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
               N  +Y+ + +  + AG  +E  K  R++ ++ G+ +++
Sbjct: 525 IEPGNSGSYVLLSNIYAAAGRWNEVAK-IRALLNDKGMKKKV 565



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 194/410 (47%), Gaps = 41/410 (10%)

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD---SRKVFDRMLDHNVMSWT 356
           +S + +H+  I+TGL        +L  +   C V    D    +  VFD + + N++ W 
Sbjct: 2   SSVRXIHAQMIKTGLH---NTNYALSKLLEFCVVSPHFDGFPYAISVFDTIQEPNLLIWN 58

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +  G+  S      A+KL+  MI   + P+ +TF  +LK+C         +Q++ H +K
Sbjct: 59  TMFRGHALSSD-PVSALKLYLVMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLK 117

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAF---------------------------ESL 449
            G  LD  V  SLISMYA++GR+EDARK F                           + L
Sbjct: 118 LGFDLDIYVHTSLISMYAQNGRLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKL 177

Query: 450 FE----KNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGA 504
           F+    K++VS+N M+  Y +  N ++A EL  E +  T V     T  +++S  +   +
Sbjct: 178 FDEIPGKDVVSWNAMISGYVETGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDS 237

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           I  G  +H+ I   GF SN  I NALI +YS+   VE A ++F  + +++VISW ++I G
Sbjct: 238 IELGRHVHSWINDHGFASNLKIVNALIDLYSKFGEVETACELFDGLWNKDVISWNTLIGG 297

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIV 623
           +        AL +F +ML  G  PN +T +++L AC+H G I  G W H        G+V
Sbjct: 298 YTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVV 357

Query: 624 QRMEHY-ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
             +      ++D+  + G +  A +   S   +  +  W   +    +HG
Sbjct: 358 TNVSSLQTSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHG 407



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/366 (28%), Positives = 191/366 (52%), Gaps = 41/366 (11%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +M   G  PD  T+  LLKSC +S+    G+ +H  + +   + +  +  SLIS+Y++ G
Sbjct: 79  VMISLGLLPDSYTFPFLLKSCAKSKIRKEGQQIHGHVLKLGFDLDIYVHTSLISMYAQNG 138

Query: 128 DLNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVN 157
            L +A K+F    ++                              +D+VSW++MIS YV 
Sbjct: 139 RLEDARKVFDISSHRDVVSYTALIAGYVSRGYIESAQKLFDEIPGKDVVSWNAMISGYVE 198

Query: 158 RGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
            G   +A+ +F EM+ +    P+E     V+ AC+ ++++ +G  ++ ++   G F S++
Sbjct: 199 TGNYKEALELFKEMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHG-FASNL 257

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +  ALID++ K   ++E+A ++FD +  K+ + W  +I   T +   ++A+ LF +M+ 
Sbjct: 258 KIVNALIDLYSKFG-EVETACELFDGLWNKDVISWNTLIGGYTHMNLYKEALLLFQEMLR 316

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR--TGLALDV-CVGCSLVDMYAKCTV 333
           SG  P+  T+  ++ AC+ L     G+ +H +  +   G+  +V  +  SL+DMYAKC  
Sbjct: 317 SGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKC-- 374

Query: 334 DGSVDDSRKVFD-RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
            G +D +++VFD  M + ++ +W A+I+G+    GR   A  +FS M    + P+  TF 
Sbjct: 375 -GDIDAAQQVFDSSMSNRSLSTWNAMISGFAMH-GRANAAFDIFSRMRMNGIEPDDITFV 432

Query: 393 SVLKAC 398
            +L AC
Sbjct: 433 GLLSAC 438



 Score =  119 bits (298), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 73/242 (30%), Positives = 128/242 (52%), Gaps = 5/242 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++M      PD  T   ++ +C +S +  LG+ VHS +       N  I+N+LI LYSK 
Sbjct: 211 EMMMMTNVRPDESTMVTVVSACAQSDSIELGRHVHSWINDHGFASNLKIVNALIDLYSKF 270

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G++  A ++F  + NK D++SW+++I  Y +     +A+ +F EML  G  PN+    ++
Sbjct: 271 GEVETACELFDGLWNK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSI 329

Query: 187 IRACSNTENVAIGHIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD-KM 243
           + AC++   + IG  I+ ++ K   G   +   +  +LIDM+ K   D+++A +VFD  M
Sbjct: 330 LPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQTSLIDMYAKCG-DIDAAQQVFDSSM 388

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
           + ++   W  MI+     G    A  +F  M ++G  PD  T  G++SACS   +   G+
Sbjct: 389 SNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGIEPDDITFVGLLSACSHSGMLDLGR 448

Query: 304 QL 305
            +
Sbjct: 449 NI 450



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 97/204 (47%), Gaps = 7/204 (3%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR---SKLEPNSVIL 116
           ++A+     M + G  P+  T   +L +C       +G+ +H  + +     +   S + 
Sbjct: 305 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYINKKLKGVVTNVSSLQ 364

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            SLI +Y+KCGD++ A ++F S  + R + +W++MIS +   G+   A  +F  M   G 
Sbjct: 365 TSLIDMYAKCGDIDAAQQVFDSSMSNRSLSTWNAMISGFAMHGRANAAFDIFSRMRMNGI 424

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC--VGCALIDMFVKGSVDLE 234
            P++  F  ++ ACS++  + +G  I+  + + GY  +      GC +ID+     +  E
Sbjct: 425 EPDDITFVGLLSACSHSGMLDLGRNIFRSMTR-GYEITPKLEHYGC-MIDLLGHSGLFKE 482

Query: 235 SAYKVFDKMTEKNTVGWTLMITRC 258
           +   +     E + V W  ++  C
Sbjct: 483 AEEMINTMPMEPDGVIWCSLLKAC 506


>gi|222616424|gb|EEE52556.1| hypothetical protein OsJ_34807 [Oryza sativa Japonica Group]
          Length = 1215

 Score =  444 bits (1143), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 245/753 (32%), Positives = 425/753 (56%), Gaps = 12/753 (1%)

Query: 55   NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            ++G +++A+     M + G   + + ++ ++  C    N   G  V S +  S L+    
Sbjct: 424  SNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVS 483

Query: 115  ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
            + NSLI+++   G +++A K+F  M  + D +SW++MIS Y ++G       +F +M   
Sbjct: 484  VANSLITMFGNLGRVHDAEKLFDRM-EEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 542

Query: 175  GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
            G  P+     +++  C+++++ + G  I+   L+    DS V V  AL++M+   +  L 
Sbjct: 543  GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSS-LDSSVTVINALVNMY-SAAGKLS 600

Query: 235  SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
             A  +F  M+ ++ + W  MI+   Q     DA++    +  +   P+  T S  + ACS
Sbjct: 601  DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 660

Query: 295  ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                   GK +H+  ++  L  ++ VG SL+ MY KC    S++D+ KVF  M  H+++S
Sbjct: 661  SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCN---SMEDAEKVFQSMPTHDIVS 717

Query: 355  WTAIITGY--VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD-SNVAEQVY 411
            +  +I GY  ++ G    +A+++FS M    + PN+ T  ++  +  +  D  N    ++
Sbjct: 718  YNVLIGGYAVLEDG---TKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLH 774

Query: 412  THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             + ++ G   D+ V NSLI+MYA+ G +E +   F S+  KN+VS+N ++ A  +  + E
Sbjct: 775  AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGE 834

Query: 472  KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
            +A +L  +++  G        A  LS  +S+ ++ +G Q+H   +KSG +S+  + NA +
Sbjct: 835  EALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM 894

Query: 532  SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
             MY +C  ++   QV  +   R    W ++I+G+AK+G+   A E F +M+A G KP+ +
Sbjct: 895  DMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYV 954

Query: 592  TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
            T++A+LSACSHAGL+ +G  ++ SM    G+   ++H  C+VDLLGR G   EA +FI  
Sbjct: 955  TFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEE 1014

Query: 652  MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
            MP+  + L+WR+ L + R H + E+G+  A+ +LE DP D +A++LLSNLYA+   W  V
Sbjct: 1015 MPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADV 1074

Query: 712  ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
              +R  MK  N+ K   CSW++  N+V  F +G+  H    +IYA+LD++ LK++E GY+
Sbjct: 1075 DKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYI 1134

Query: 772  PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
             DT+  LH+ +EEQK Q L+ HSEK+A+A+GLI
Sbjct: 1135 ADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 1167



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 164/565 (29%), Positives = 288/565 (50%), Gaps = 17/565 (3%)

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
           R      G  +H+L  R+ L  N  I  +L+ LY   G +++A ++F  M  +R++VSW+
Sbjct: 358 RDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEM-PERNVVSWT 416

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           +++ +  + G   +A+  + +M   G   N   F+ V+  C + EN   G  +   ++  
Sbjct: 417 ALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVS 476

Query: 210 GYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
           G   + V V  +LI MF  G++  +  A K+FD+M E +T+ W  MI+  +  G      
Sbjct: 477 G-LQNQVSVANSLITMF--GNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCF 533

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
            +F DM   G  PD  TL  ++S C+  + F+ G  +HS  +R+ L   V V  +LV+MY
Sbjct: 534 LVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMY 593

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           +     G + D+  +F  M   +++SW  +I+ YVQ+     +A+K    +     +PNH
Sbjct: 594 SAA---GKLSDAEFLFWNMSRRDLISWNTMISSYVQN-CNSTDALKTLGQLFHTNESPNH 649

Query: 389 FTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            TF+S L AC   G L+D  +   +      +   L   VGNSLI+MY +   MEDA K 
Sbjct: 650 LTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL---VGNSLITMYGKCNSMEDAEKV 706

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL-SGASSIGA 504
           F+S+   ++VSYN ++  YA   +  KA ++   +   G+  +  T  ++  S ASS   
Sbjct: 707 FQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDL 766

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
              G  +HA II++GF S+  + N+LI+MY++C N+E++  +F  + ++N++SW ++I  
Sbjct: 767 HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 826

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
             + G    AL++F  M   G K + +     LS+C+    + EG +    +  + G+  
Sbjct: 827 NVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDS 885

Query: 625 RMEHYACMVDLLGRSGSLTEALEFI 649
                   +D+ G+ G + E L+ +
Sbjct: 886 DSYVVNAAMDMYGKCGKMDEMLQVV 910



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/505 (29%), Positives = 259/505 (51%), Gaps = 17/505 (3%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK---IFKSMGNKRDIVSWSSMISSYV 156
           +H L  R  L  ++   N+L++ Y +  D + A     +F  M + R   +W + +S  V
Sbjct: 261 IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMAD-RTPSTWYTAVSGCV 319

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC---SNTENVAIGHIIYGFLLKCGYFD 213
             G    A  M   M E G   + +  ++++ AC      E +A G  I+    + G   
Sbjct: 320 RCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLM- 378

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
            +V +G AL+ ++    + +  A ++F +M E+N V WT ++   +  G   +A+R +  
Sbjct: 379 GNVYIGTALLHLYGSRGI-VSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQ 437

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G   +    + VVS C  LE    G Q+ S  I +GL   V V  SL+ M+     
Sbjct: 438 MRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNL-- 495

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G V D+ K+FDRM +H+ +SW A+I+ Y   G   K    +FSDM    + P+  T  S
Sbjct: 496 -GRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSK-CFLVFSDMRHHGLRPDATTLCS 553

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESLFE 451
           ++  C +    + +     H++    +LD  V   N+L++MY+ +G++ DA   F ++  
Sbjct: 554 LMSVCAS--SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDAEFLFWNMSR 611

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           ++L+S+NTM+ +Y +N NS  A + L ++  T    +  TF+S L   SS GA+  G+ +
Sbjct: 612 RDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACSSPGALIDGKMV 671

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA +++   + N  + N+LI+MY +C ++E A +VF+ M   +++S+  +I G+A     
Sbjct: 672 HAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVSYNVLIGGYAVLEDG 731

Query: 572 ARALEIFYKMLADGIKPNGITYIAV 596
            +A+++F  M + GIKPN IT I +
Sbjct: 732 TKAMQVFSWMRSAGIKPNYITMINI 756



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 218/438 (49%), Gaps = 9/438 (2%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL-- 296
           +FD+M ++    W   ++ C + G    A  +   M   G     F L+ +V+AC     
Sbjct: 299 LFDEMADRTPSTWYTAVSGCVRCGSHGKAFEMLRGMREPGVPLSGFALASLVTACERRGR 358

Query: 297 -ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
            E    G  +H+   R GL  +V +G +L+ +Y      G V D++++F  M + NV+SW
Sbjct: 359 DEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGS---RGIVSDAQRLFWEMPERNVVSW 415

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           TA++   + S G  +EA++ +  M +  V  N   FA+V+  CG+L +     QV +  +
Sbjct: 416 TALMVA-LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVI 474

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
             G      V NSLI+M+   GR+ DA K F+ + E + +S+N M+  Y+      K F 
Sbjct: 475 VSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFL 534

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           +  ++   G+   A T  SL+S  +S      G  IH+  ++S  +S+  + NAL++MYS
Sbjct: 535 VFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYS 594

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
               +  A  +F  M  R++ISW +MI+ + ++  +  AL+   ++      PN +T+ +
Sbjct: 595 AAGKLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSS 654

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
            L ACS  G + +G K   ++  +  + + +     ++ + G+  S+ +A +  +SMP +
Sbjct: 655 ALGACSSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP-T 712

Query: 656 ADVLVWRTFLGACRVHGD 673
            D++ +   +G   V  D
Sbjct: 713 HDIVSYNVLIGGYAVLED 730



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 133/597 (22%), Positives = 254/597 (42%), Gaps = 40/597 (6%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK---IFKSMGNKRDIVSWSSMISSYV 156
           +H L  R  L  ++   N+L++ Y +  D + A     +F  M + R   +W + +S  V
Sbjct: 38  IHGLAVRLALPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMAD-RTPSTWYTAVSGCV 96

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC---SNTENVAIGHIIYGFLLKCGYFD 213
             G+   A  M   M E G   + +  ++++ AC      E +A G  I+    + G   
Sbjct: 97  RCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLM- 155

Query: 214 SDVCVGCALIDM--------FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
            +V +G AL+ +            S+   SA+         +         R   L  PR
Sbjct: 156 GNVYIGRALLHLPQIRRREALDAVSLSPSSAHPAAGHPPPSHPPAAATPPPRHHFLLLPR 215

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELF------------TSGKQLHSWAIRTG 313
           +  RL   M      P  ++                             + +H  A+R  
Sbjct: 216 NHYRLHATM------PSIYSRPPRRPPAPGRRGVPARRLLPPRRPPLLARAIHGLAVRLA 269

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
           L L      +L+  Y +     +   +  +FD M D    +W   ++G V+ G   K A 
Sbjct: 270 LPLSAFHRNTLLAFYFRQRDASAAAAALHLFDEMADRTPSTWYTAVSGCVRCGSHGK-AF 328

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNL-LDSNVAEQVYTHAV--KRGRALDDCVGNSLI 430
           ++   M +  V  + F  AS++ AC     D  +A     HA+  + G   +  +G +L+
Sbjct: 329 EMLRGMREPGVPLSGFALASLVTACERRGRDEGIACGAAIHALTHRAGLMGNVYIGTALL 388

Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
            +Y   G + DA++ F  + E+N+VS+  ++ A + N   E+A     ++   GV  +A 
Sbjct: 389 HLYGSRGIVSDAQRLFWEMPERNVVSWTALMVALSSNGYLEEALRAYRQMRRDGVPCNAN 448

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            FA+++S   S+     G Q+ +++I SG ++   + N+LI+M+     V  A ++F  M
Sbjct: 449 AFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVSVANSLITMFGNLGRVHDAEKLFDRM 508

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
           E+ + ISW +MI+ ++  G  ++   +F  M   G++P+  T  +++S C+ +   S G 
Sbjct: 509 EEHDTISWNAMISMYSHQGICSKCFLVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHG- 567

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
               S+     +   +     +V++   +G L++A EF+       D++ W T + +
Sbjct: 568 SGIHSLCLRSSLDSSVTVINALVNMYSAAGKLSDA-EFLFWNMSRRDLISWNTMISS 623


>gi|357129337|ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 247/654 (37%), Positives = 347/654 (53%), Gaps = 79/654 (12%)

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           F PD   L   + +C    L    + LH+ A+ +GLA D  V  SL+  Y +    G+  
Sbjct: 16  FPPDPHLLPSALKSCPAQPL---ARALHAAAVVSGLAEDPFVASSLLHSYIRLGATGA-- 70

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV-KLFSDMIQGQVAPNHFTF------ 391
            +R VFDRM + NV+ W+A+I GY   G  D EA   L   M    V PN  T+      
Sbjct: 71  -ARSVFDRMPEKNVVGWSALIAGYSARG--DAEAAWGLLEQMRSAGVEPNVITWNGLVSG 127

Query: 392 -----------------------------ASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
                                        +  L A G++ + +V +QV+ + VK G  LD
Sbjct: 128 LNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAGCRLD 187

Query: 423 DCVGNSLISMYARSGRMEDARKAF-------------------------ESLF------- 450
            CV  +LI MY + GR ++  + F                         E+L        
Sbjct: 188 ACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFIC 247

Query: 451 ---EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
              E N+VS+ ++V    +N    +A +L   ++  GV  ++ T   +L   +++ A+  
Sbjct: 248 RGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMH 307

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G   H   ++ GF  +  + +AL+ MY++C     A  +F  M  RNV+SW +MI G+A 
Sbjct: 308 GRSAHCFSLRKGFLHDVYVGSALVDMYAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAM 367

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG AA A+++F  M     KP+ +T+  VL ACS AGL  EG ++F  M   HGI  RME
Sbjct: 368 HGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQGHGISPRME 427

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HYACMV LLGRSG L EA + I  MP   D  +W + LG+CRV+G+  L + AAE + + 
Sbjct: 428 HYACMVTLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQL 487

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           +P +   ++LLSN+YAS   W+ V  +R  MK   L KE GCSWIE  NKVH    G+ S
Sbjct: 488 EPGNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNS 547

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS 807
           HP    I  +L+QL +++   G+ P  +FVLH++EE++K   L  HSEK+AVA GLIST 
Sbjct: 548 HPMMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAVALGLISTR 607

Query: 808 KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              P+RV KNLR+CGDCH A+K+IS    REI +RD+NRFHH KDGKCSC DYW
Sbjct: 608 PGTPLRVIKNLRICGDCHEAMKFISSFEQREISVRDTNRFHHFKDGKCSCGDYW 661



 Score =  152 bits (384), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 197/421 (46%), Gaps = 49/421 (11%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSM---GNKRDIVSWSSMISSYVNRGKQVDAIH 166
           E N V  ++LI+ YS  GD   A  + + M   G + ++++W+ ++S     G+ +DA+ 
Sbjct: 80  EKNVVGWSALIAGYSARGDAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVT 139

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
             V M   GF P+    S  + A  + + V++G  ++G+++K G    D CV  ALIDM+
Sbjct: 140 ALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVKAG-CRLDACVVTALIDMY 198

Query: 227 VK-GSVD-----------------------------LESAYKVFDKM----TEKNTVGWT 252
            K G  D                             +  A  +F +      E N V WT
Sbjct: 199 GKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWT 258

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            ++  C Q G   +A+ LF  M   G  P+  T+  V+ A + +     G+  H +++R 
Sbjct: 259 SIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRK 318

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G   DV VG +LVDMYAKC   G    +R +FD M   NV+SW A+I GY   G     A
Sbjct: 319 GFLHDVYVGSALVDMYAKC---GKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDA-ANA 374

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLI 430
           V+LF  M + +  P+  TF  VL AC     +    + Y + +++G  +   + +   ++
Sbjct: 375 VQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR-YFNEMQQGHGISPRMEHYACMV 433

Query: 431 SMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA---YAKNLNSEKAFELLHEIEDTGVG 486
           ++  RSG++++A      + FE +   + +++ +   Y   L +E A E L ++E    G
Sbjct: 434 TLLGRSGKLDEAYDLINEMPFEPDSCIWGSLLGSCRVYGNVLLAEVAAEKLFQLEPGNAG 493

Query: 487 T 487
            
Sbjct: 494 N 494



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 171/372 (45%), Gaps = 45/372 (12%)

Query: 232 DLESAYKVFDKM----TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           D E+A+ + ++M     E N + W  +++   + G   DA+   + M   GF PD   +S
Sbjct: 98  DAEAAWGLLEQMRSAGVEPNVITWNGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVS 157

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD-- 345
             +SA  +++  + GKQ+H + ++ G  LD CV  +L+DMY KC   G  D+  +VF   
Sbjct: 158 CALSAVGDVKEVSVGKQVHGYVVKAGCRLDACVVTALIDMYGKC---GRADEIVRVFHES 214

Query: 346 ---------------------------------RMLDHNVMSWTAIITGYVQSGGRDKEA 372
                                            R ++ NV+SWT+I+   VQ+ GRD EA
Sbjct: 215 SHMDVASCNALVAGLSRNAQVSEALLLFREFICRGVELNVVSWTSIVACCVQN-GRDLEA 273

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           V LF  M    V PN  T   VL A  N+         +  ++++G   D  VG++L+ M
Sbjct: 274 VDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDVYVGSALVDM 333

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+ G+   AR  F+++  +N+VS+N M+  YA + ++  A +L   ++         TF
Sbjct: 334 YAKCGKARHARTIFDAMPSRNVVSWNAMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTF 393

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
             +L   S  G   +G +    + +  G       Y  ++++  R   ++ A+ +  EM 
Sbjct: 394 TCVLGACSQAGLTEEGRRYFNEMQQGHGISPRMEHYACMVTLLGRSGKLDEAYDLINEMP 453

Query: 552 -DRNVISWTSMI 562
            + +   W S++
Sbjct: 454 FEPDSCIWGSLL 465



 Score =  109 bits (273), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 78/292 (26%), Positives = 127/292 (43%), Gaps = 37/292 (12%)

Query: 48  NRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N L+  LN  GR   A+  L  M  +G  PD    S  L +    +   +GK VH  + +
Sbjct: 122 NGLVSGLNRSGRALDAVTALVRMHSEGFFPDATGVSCALSAVGDVKEVSVGKQVHGYVVK 181

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKS---------------------------- 138
           +    ++ ++ +LI +Y KCG  +E  ++F                              
Sbjct: 182 AGCRLDACVVTALIDMYGKCGRADEIVRVFHESSHMDVASCNALVAGLSRNAQVSEALLL 241

Query: 139 ------MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
                  G + ++VSW+S+++  V  G+ ++A+ +F  M  +G  PN      V+ A +N
Sbjct: 242 FREFICRGVELNVVSWTSIVACCVQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFAN 301

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
              +  G   + F L+ G+   DV VG AL+DM+ K       A  +FD M  +N V W 
Sbjct: 302 VAALMHGRSAHCFSLRKGFLH-DVYVGSALVDMYAKCG-KARHARTIFDAMPSRNVVSWN 359

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            MI      G   +A++LF  M      PD  T + V+ ACS+  L   G++
Sbjct: 360 AMIGGYAMHGDAANAVQLFCSMQKCKQKPDLVTFTCVLGACSQAGLTEEGRR 411



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 50/210 (23%), Positives = 92/210 (43%), Gaps = 3/210 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +GR  +A+     M   G  P+  T   +L +         G+  H    R     + 
Sbjct: 265 VQNGRDLEAVDLFRTMQSIGVEPNSVTIPCVLPAFANVAALMHGRSAHCFSLRKGFLHDV 324

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++L+ +Y+KCG    A  IF +M + R++VSW++MI  Y   G   +A+ +F  M +
Sbjct: 325 YVGSALVDMYAKCGKARHARTIFDAMPS-RNVVSWNAMIGGYAMHGDAANAVQLFCSMQK 383

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
               P+   F+ V+ ACS       G   +  + + G+  S      A +   +  S  L
Sbjct: 384 CKQKPDLVTFTCVLGACSQAGLTEEGRRYFNEMQQ-GHGISPRMEHYACMVTLLGRSGKL 442

Query: 234 ESAYKVFDKMT-EKNTVGWTLMITRCTQLG 262
           + AY + ++M  E ++  W  ++  C   G
Sbjct: 443 DEAYDLINEMPFEPDSCIWGSLLGSCRVYG 472


>gi|297745590|emb|CBI40755.3| unnamed protein product [Vitis vinifera]
          Length = 789

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 258/792 (32%), Positives = 436/792 (55%), Gaps = 87/792 (10%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           +K C   R+  + + +H+ L    L+ +  + N L+++YS CG +++A ++F  +    +
Sbjct: 11  MKECASLRSIPIARKLHAQLIFMGLKSSIFLQNHLLNMYSNCGLISDAYRVFGGIMFP-N 69

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLEL----------GFCPNEYCFSAVIRACSNTE 194
           + SW++MIS + + G+  +A  +F +M E           G+  N     A I+A  +  
Sbjct: 70  VYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNGE-LEATIKASGSLG 128

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD--------------------- 232
            + +   ++GF  K   F  D CV  +++DM++K G++D                     
Sbjct: 129 YLKLALQLHGFAEKFD-FGIDTCVETSVLDMYIKCGAMDFAQKVFCRTPNPSLFCWNSMI 187

Query: 233 --------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
                   ++ A ++F KM E++TV W  MI+  +Q G   + +  FL+M   GF P+  
Sbjct: 188 YGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQGFRPNSM 247

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T + V+SAC+ +     G  LH+  +R    LDV  GC L+DMYAKC   G ++ +R+VF
Sbjct: 248 TYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKC---GRLESARQVF 304

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           D + +HN +SWT++I G  Q+G ++ EA+ LF+ M +  VA + FT A+VL  C +  D 
Sbjct: 305 DGLTEHNAVSWTSLIGGVAQAGFQE-EALVLFNQMREVPVASDQFTLATVLGVCLSQKDI 363

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYAR----------------------------- 435
           ++ EQ++ H + RG      V N+L++MYA+                             
Sbjct: 364 SIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAF 423

Query: 436 --SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
             +G +E AR+ F+ + E+N++S+N+M+  Y +    E+  ++  ++   GV T   TF+
Sbjct: 424 SQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFS 483

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           + +S  + +  +  G QI A+  K GF SN  + N++++MYSRC  +E A ++F  +  +
Sbjct: 484 TSISACADLAVLILGNQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK 543

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           N++SW +M+ G+A++G   + +EIF KML  G  P+ I+Y++VLS CSH+G +SEG  +F
Sbjct: 544 NLVSWNAMMAGYAQNGQGRKVIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYF 603

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            SM  +HGI    EH+ CMVDLLGR+G L +A   I  MP   +  +W   L ACR+HG+
Sbjct: 604 LSMTKDHGISPMSEHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAACRIHGN 663

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
           T+L + A + +LE D + P ++ LL+N+Y+ +G  + V N+RK M+++ + K  GCSWIE
Sbjct: 664 TKLAELAVKNLLELDAEGPGSYCLLANIYSESGKIQGVTNVRKLMRDKGVRKNPGCSWIE 723

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
            DN+VH F V +T+HP+  +++  L+++  KI+E     +       +   +   Y   H
Sbjct: 724 VDNRVHVFTVDDTNHPQIKDVHRMLEEIIKKIEEIKNYANV------MNSGRSHNY---H 774

Query: 794 SEKIAVAFGLIS 805
           SEK+AV   LIS
Sbjct: 775 SEKLAVPLRLIS 786



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 143/562 (25%), Positives = 253/562 (45%), Gaps = 79/562 (14%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           F   ++ C++  ++ I   ++  L+  G   S + +   L++M+    + +  AY+VF  
Sbjct: 7   FYESMKECASLRSIPIARKLHAQLIFMG-LKSSIFLQNHLLNMYSNCGL-ISDAYRVFGG 64

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM----------ILSGFLPDRFTLSGVVSA 292
           +   N   W  MI+     G  R+A +LF  M          ++SG+  +   L   + A
Sbjct: 65  IMFPNVYSWNTMISGFADSGQMREAEKLFEKMPERDSVSWNSMMSGYFHNG-ELEATIKA 123

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
              L       QLH +A +    +D CV  S++DMY KC   G++D ++KVF R  + ++
Sbjct: 124 SGSLGYLKLALQLHGFAEKFDFGIDTCVETSVLDMYIKC---GAMDFAQKVFCRTPNPSL 180

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
             W ++I GY + G                              G   E +  F +M   
Sbjct: 181 FCWNSMIYGYSKYGSVKKALELFAKMPERDTVSWNTMISILSQHGFGAETLNTFLEMWNQ 240

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
              PN  T+ASVL AC ++ D      ++   V+    LD   G  LI MYA+ GR+E A
Sbjct: 241 GFRPNSMTYASVLSACTSIYDLEWGAHLHARIVRMEPCLDVYAGCGLIDMYAKCGRLESA 300

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           R+ F+ L E N VS+ +++   A+    E+A  L +++ +  V +  +T A++L    S 
Sbjct: 301 RQVFDGLTEHNAVSWTSLIGGVAQAGFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQ 360

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
             I  GEQ+HA  I  G +S+  + NAL++MY++C +V  A   F+ M  R++ISWT+MI
Sbjct: 361 KDISIGEQLHAHTITRGLDSSVPVANALVTMYAKCGDVWKANHAFELMPIRDIISWTAMI 420

Query: 563 TGFA-------------------------------KHGFAARALEIFYKMLADGIKPNGI 591
           T F+                               + G+    L+++ +ML +G+K + I
Sbjct: 421 TAFSQAGDVEKAREYFDKMPERNVISWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWI 480

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+   +SAC+   ++  G     +  ++ G    +     +V +  R G + EA +   S
Sbjct: 481 TFSTSISACADLAVLILG-NQILAQAEKLGFSSNVSVANSVVTMYSRCGQIEEAQKMFSS 539

Query: 652 MPLSADVLVWRTFLGACRVHGD 673
           + +  +++ W   +     +G 
Sbjct: 540 IVMK-NLVSWNAMMAGYAQNGQ 560



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 81/341 (23%), Positives = 159/341 (46%), Gaps = 45/341 (13%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+   + M +     D  T + +L  C+  ++  +G+ +H+      L+ +  + 
Sbjct: 326 GFQEEALVLFNQMREVPVASDQFTLATVLGVCLSQKDISIGEQLHAHTITRGLDSSVPVA 385

Query: 117 NSLISLYSKCGDLNEANKIFKSM------------------GN------------KRDIV 146
           N+L+++Y+KCGD+ +AN  F+ M                  G+            +R+++
Sbjct: 386 NALVTMYAKCGDVWKANHAFELMPIRDIISWTAMITAFSQAGDVEKAREYFDKMPERNVI 445

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW+SM+++Y+ RG   + + ++++ML  G   +   FS  I AC++   + +G+ I    
Sbjct: 446 SWNSMLATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQA 505

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
            K G F S+V V  +++ M+ +    +E A K+F  +  KN V W  M+    Q G  R 
Sbjct: 506 EKLG-FSSNVSVANSVVTMYSRCG-QIEEAQKMFSSIVMKNLVSWNAMMAGYAQNGQGRK 563

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
            I +F  M+  G +PD+ +   V+S CS     + G+          L++    G S + 
Sbjct: 564 VIEIFEKMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYF-------LSMTKDHGISPMS 616

Query: 327 MYAKCTVD-----GSVDDSRKVFDRM-LDHNVMSWTAIITG 361
            +  C VD     G ++ ++ + ++M    N   W A++  
Sbjct: 617 EHFVCMVDLLGRAGQLEQAKNLINQMPFKPNAAIWGALLAA 657



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 52/214 (24%), Positives = 104/214 (48%), Gaps = 11/214 (5%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  ++  G  ++ +     M ++G   D  T+S  + +C       LG  + +   +   
Sbjct: 451 LATYMQRGYWEEGLKVYIQMLREGVKTDWITFSTSISACADLAVLILGNQILAQAEKLGF 510

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             N  + NS++++YS+CG + EA K+F S+  K ++VSW++M++ Y   G+    I +F 
Sbjct: 511 SSNVSVANSVVTMYSRCGQIEEAQKMFSSIVMK-NLVSWNAMMAGYAQNGQGRKVIEIFE 569

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK----CGYFDSDVCVGCALIDM 225
           +ML +G  P++  + +V+  CS++  V+ G   +  + K        +  VC    ++D+
Sbjct: 570 KMLNIGNVPDQISYVSVLSGCSHSGFVSEGQYYFLSMTKDHGISPMSEHFVC----MVDL 625

Query: 226 FVKGSVDLESAYKVFDKMTEK-NTVGWTLMITRC 258
             +    LE A  + ++M  K N   W  ++  C
Sbjct: 626 LGRAG-QLEQAKNLINQMPFKPNAAIWGALLAAC 658


>gi|297798134|ref|XP_002866951.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312787|gb|EFH43210.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 630

 Score =  444 bits (1142), Expect = e-122,   Method: Compositional matrix adjust.
 Identities = 230/591 (38%), Positives = 349/591 (59%), Gaps = 38/591 (6%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+  +R  L +        + ++      G +  S  +F + +D ++  +TA I    
Sbjct: 45  QIHAAILRHNLLIHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 104

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            +G +D +A  L+  ++  Q+ PN FTF+S+LK+C     +   + ++TH +K G  LD 
Sbjct: 105 INGLKD-QAFLLYVQLLSSQINPNEFTFSSILKSC----STKSGKLIHTHVLKFGLGLDP 159

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V   L+ +YA+ G +  A+K F+ + E++LVS   M+  YAK  N E A  L   + + 
Sbjct: 160 YVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDRMCER 219

Query: 484 GV--------GTSAYTFAS------------------------LLSGASSIGAIGKGEQI 511
            +        G S + F S                         LS  S IGA+  G  I
Sbjct: 220 DIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALETGRWI 279

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H  +  S    N  +  ALI MYS+C ++E A  VF +   +++++W +MITG+A HG++
Sbjct: 280 HVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMITGYAMHGYS 339

Query: 572 ARALEIFYKMLA-DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             AL +F +M    G++P  IT+I  L AC+HAGL++EG + F SM  E+GI  ++EHY 
Sbjct: 340 QDALRLFDEMQGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEYGIKPKIEHYG 399

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           C+V LLGR+G L  A E I++M + AD ++W + LG+C++HG+  LGK  AE ++ Q+  
Sbjct: 400 CLVSLLGRAGQLKRAYEIIKNMNMEADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNIS 459

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           +   ++LLSN+YA  G +E VA +R  MKE+ ++KE G S IE DNKVH+F  G+  H K
Sbjct: 460 NSGIYVLLSNIYALVGDYEGVAKVRNLMKEKGIVKEPGISTIEIDNKVHEFRAGDREHLK 519

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + EIY  L +++ +IK  GY+P+TN VLH+LEE +K + L  HSE++A+A+GLIST    
Sbjct: 520 SKEIYTMLRKMSERIKSHGYVPNTNTVLHDLEETEKERSLQVHSERLAIAYGLISTKPGS 579

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           P+++FKNLRVC DCHT  K IS +TGR+IV+RD NRFHH  DG CSC+D+W
Sbjct: 580 PLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFSDGSCSCDDFW 630



 Score =  139 bits (350), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 230/503 (45%), Gaps = 93/503 (18%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILN-SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
             H   L H+LL    + P   +LN  L   Y+  G +  +  +F    +  D+  +++ 
Sbjct: 45  QIHAAILRHNLL----IHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDP-DLFLFTAA 99

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           I++    G +  A  ++V++L     PNE+ FS+++++CS       G +I+  +LK G 
Sbjct: 100 INTASINGLKDQAFLLYVQLLSSQINPNEFTFSSILKSCSTKS----GKLIHTHVLKFG- 154

Query: 212 FDSDVCVGCALIDMFVKG------------------------------SVDLESAYKVFD 241
              D  V   L+D++ KG                                ++E+A  +FD
Sbjct: 155 LGLDPYVATGLVDIYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFD 214

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF-LPDRFTLSGVVSACSELELFT 300
           +M E++ V W +MI   +Q G P DA+ LF  ++  G   PD  T+   +SACS++    
Sbjct: 215 RMCERDIVSWNVMIDGYSQHGFPSDALMLFQKLLADGKPKPDEITVVAALSACSQIGALE 274

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           +G+ +H +   + + L+V V  +L+DMY+KC   GS++++  VF+     ++++W A+IT
Sbjct: 275 TGRWIHVFVNSSRIRLNVKVCTALIDMYSKC---GSLEEAVLVFNDTPRKDIVAWNAMIT 331

Query: 361 GYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVY-----TH 413
           GY    G  ++A++LF +M QG   + P   TF   L+AC +    N   Q++      +
Sbjct: 332 GYAMH-GYSQDALRLFDEM-QGITGLQPTDITFIGTLQACAHAGLVNEGIQIFESMGQEY 389

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K       C    L+S+  R+G++   ++A+E +                KN+N E  
Sbjct: 390 GIKPKIEHYGC----LVSLLGRAGQL---KRAYEII----------------KNMNME-- 424

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
                          +  ++S+L      G    G++I   +I     SN  IY  L ++
Sbjct: 425 -------------ADSVLWSSVLGSCKLHGEFMLGKEIAEYLIGQNI-SNSGIYVLLSNI 470

Query: 534 YSRCANVEAAFQVFKEMEDRNVI 556
           Y+   + E   +V   M+++ ++
Sbjct: 471 YALVGDYEGVAKVRNLMKEKGIV 493



 Score = 78.6 bits (192), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 94/196 (47%), Gaps = 18/196 (9%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T    L +C +      G+ +H  +  S++  N  +  +LI +YSKCG L EA  +
Sbjct: 255 PDEITVVAALSACSQIGALETGRWIHVFVNSSRIRLNVKVCTALIDMYSKCGSLEEAVLV 314

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTE 194
           F     ++DIV+W++MI+ Y   G   DA+ +F EM  + G  P +  F   ++AC++  
Sbjct: 315 FNDT-PRKDIVAWNAMITGYAMHGYSQDALRLFDEMQGITGLQPTDITFIGTLQACAHAG 373

Query: 195 NVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EK 246
            V  G  I       YG   K  ++      GC L+ +  +    L+ AY++   M  E 
Sbjct: 374 LVNEGIQIFESMGQEYGIKPKIEHY------GC-LVSLLGRAG-QLKRAYEIIKNMNMEA 425

Query: 247 NTVGWTLMITRCTQLG 262
           ++V W+ ++  C   G
Sbjct: 426 DSVLWSSVLGSCKLHG 441


>gi|218195864|gb|EEC78291.1| hypothetical protein OsI_18005 [Oryza sativa Indica Group]
          Length = 690

 Score =  444 bits (1142), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/690 (36%), Positives = 395/690 (57%), Gaps = 23/690 (3%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           ++RA +   ++  G  ++  L+K G F SD  +   LIDM+ K    L  A +VFD M E
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLG-FGSDTMLNNNLIDMYAKCG-KLHMAGEVFDGMPE 67

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N V WT ++      G  R+ +RLF +M  SG  P+ FTLS  + AC       +G Q+
Sbjct: 68  RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQI 125

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H   +RTG      V  SLV MY+K    G   D+R+VFD +   N+ +W ++I+GY  +
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTG---DARRVFDVIPSRNLATWNSMISGYAHA 182

Query: 366 G-GRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG--RAL 421
           G GRD  ++ +F +M +     P+ FTFAS+LKAC  L  +    QV+     RG   A 
Sbjct: 183 GQGRD--SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPAS 240

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  +  +L+ +Y +  R+  A + F+ L  +N + + T++  +A+    ++A  L     
Sbjct: 241 NAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFW 300

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
            +GV    +  +S+++  +    + +G+Q+H    K+    +  + N+L+ MY +C    
Sbjct: 301 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 360

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A + F+EM  RNV+SWT+MI G  KHG    A+++F +M A+G++ + + Y+A+LSACS
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 420

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+GL+ E  ++F  +  +  +  + EHYACMVDLLGR+G L EA E I SMP+   V VW
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           +T L ACRVH D  +G+   +++L  D  +P  +++LSN+ A AG W     IR  M+ +
Sbjct: 481 QTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRK 540

Query: 722 NLIKEAGCSWIEADNKVHKFH-VGETSHPKTLEIYAELDQLALKIKE-FGYLPDTNFVLH 779
            L K+ GCSW E D +VH F+  G+ +HP+  +I   L ++  +++E  GY  D    LH
Sbjct: 541 GLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALH 600

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLI--------STSKSKPIRVFKNLRVCGDCHTAIKYI 831
           +++EE +V+ L +HSE++AV   L+             + +RV+KNLRVCGDCH  +K +
Sbjct: 601 DVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGL 660

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S V  R +V+RD+NRFH  ++G CSC DYW
Sbjct: 661 SAVVRRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  199 bits (507), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 261/529 (49%), Gaps = 21/529 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL++  R  +   G  +H+ L +     ++++ N+LI +Y+KCG L+ A ++F  M  +R
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM-PER 68

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           ++VSW++++  +++ G+  + + +F EM   G  PNE+  SA ++AC       +   I+
Sbjct: 69  NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGV--QIH 126

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G  ++ G+   DV V  +L+ M+ KG    + A +VFD +  +N   W  MI+     G 
Sbjct: 127 GVCVRTGFEGHDV-VANSLVVMYSKGRWTGD-ARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 264 PRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL--ALDVCV 320
            RD++ +F +M       PD FT + ++ ACS L     G Q+H+     G+  A +  +
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 244

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +L+D+Y KC     +  + +VFD +   N + WT +I G+ Q  G+ KEA+ LF    
Sbjct: 245 AGALLDVYVKCH---RLPVAMQVFDGLERRNAIQWTTVIVGHAQE-GQVKEAMCLFRRFW 300

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              V  +    +SV+    +       +QV+ +  K    LD  V NSL+ MY + G   
Sbjct: 301 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 360

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +A + F  +  +N+VS+  M++   K+ +  +A +L  E++  GV      + +LLS  S
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALLSACS 420

Query: 501 SIGAIGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
             G + +  +  +RI +      ++ H  Y  ++ +  R   +  A ++   M  +  V 
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEH--YACMVDLLGRAGELREAKELILSMPMEPTVG 478

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAG 604
            W ++++    H   A   E+   +LA DG  P  + Y+ + +  + AG
Sbjct: 479 VWQTLLSACRVHKDVAVGREVGDVLLAVDGDNP--VNYVMLSNILAEAG 525



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 220/435 (50%), Gaps = 20/435 (4%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +  R  ++ ++ A +       G QLH+  ++ G   D  +  +L+DMYAKC   G +  
Sbjct: 1   MERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKC---GKLHM 57

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           + +VFD M + NV+SWTA++ G++   G  +E ++LF +M     +PN FT ++ LKACG
Sbjct: 58  AGEVFDGMPERNVVSWTALMVGFLHH-GEARECLRLFGEMRGSGTSPNEFTLSATLKACG 116

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
               + V  Q++   V+ G    D V NSL+ MY++     DAR+ F+ +  +NL ++N+
Sbjct: 117 GGTRAGV--QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNS 174

Query: 460 MVDAYAKNLNSEKAFELLHEIEDT-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           M+  YA       +  +  E++         +TFASLL   S +GA  +G Q+HA +   
Sbjct: 175 MISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR 234

Query: 519 GFE--SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           G    SN  +  AL+ +Y +C  +  A QVF  +E RN I WT++I G A+ G    A+ 
Sbjct: 235 GVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMC 294

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDL 635
           +F +  + G++ +G    +V++  +   L+ +G + H  +     G+   + +   +VD+
Sbjct: 295 LFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN--SLVDM 352

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ----D 691
             + G   EA    R MP + +V+ W   +     HG    G+ A ++  E   +    D
Sbjct: 353 YLKCGLTGEAGRRFREMP-ARNVVSWTAMINGVGKHGH---GREAIDLFEEMQAEGVEAD 408

Query: 692 PAAHILLSNLYASAG 706
             A++ L +  + +G
Sbjct: 409 EVAYLALLSACSHSG 423



 Score = 92.4 bits (228), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP- 111
           H   GR    +F  ++  +    PD  T++ LLK+C        G  VH+ +    + P 
Sbjct: 181 HAGQGRDSLLVFR-EMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 239

Query: 112 -NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            N+++  +L+ +Y KC  L  A ++F  +  +R+ + W+++I  +   G+  +A+ +F  
Sbjct: 240 SNAILAGALLDVYVKCHRLPVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVKEAMCLFRR 298

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
               G   + +  S+V+   ++   V  G  ++ +  K      DV V  +L+DM++K  
Sbjct: 299 FWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA-GLDVSVANSLVDMYLKCG 357

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           +  E+  + F +M  +N V WT MI    + G  R+AI LF +M   G   D      ++
Sbjct: 358 LTGEAGRR-FREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQAEGVEADEVAYLALL 416

Query: 291 SACS 294
           SACS
Sbjct: 417 SACS 420


>gi|357125908|ref|XP_003564631.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g41080-like [Brachypodium distachyon]
          Length = 647

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/581 (38%), Positives = 346/581 (59%), Gaps = 10/581 (1%)

Query: 282 DRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           DRFT + ++ A ++L +L T+       + R  ++ ++ +G         C  +G +  +
Sbjct: 76  DRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIG--------GCIKNGDLGSA 127

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           R++FD+M   NV +W A++ G    G  D+++++ F  M +  + P+ F   SV + C  
Sbjct: 128 RELFDKMPTRNVATWNAMVAGLTNVG-LDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAG 186

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           LLD     QV+ + V+ G   D CVGNSL  MY R G + +      +L    +VS+NT 
Sbjct: 187 LLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTT 246

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +    +N +SE A E    +    V     TF S +S  S + A+ +G+Q+HA++IK+G 
Sbjct: 247 IAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKAGV 306

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
           +    +  +L+ MYSRC  +  + +V+      ++   ++MI+    HG   +A+E+F +
Sbjct: 307 DKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVELFKQ 366

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M+  G +PN +T++A+L ACSH+GL  EG + F  M   +G    ++HY C+VDLLGRSG
Sbjct: 367 MMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGRSG 426

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
            L EA   I SMP+ AD ++W+T L AC+   + ++ +  AE ++E DP+D A ++LLSN
Sbjct: 427 CLDEAEALILSMPVRADGVIWKTLLSACKTQKNFDMAERIAERVIESDPRDSAPYVLLSN 486

Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
           + A++  W  V  +RK M+E+++ KE G SW+E   +VH+F  G+ SHP+  EI   L +
Sbjct: 487 IRATSKRWGDVTEVRKIMREKDIRKEPGVSWVEHKGQVHQFCTGDKSHPRQGEIDEYLKE 546

Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRV 820
           +  KI++ GY PD   V H++E+E+K   L  HSEK+A+AF  ++  +  PIRV KNLRV
Sbjct: 547 MMGKIRQCGYAPDMTMVFHDMEDEEKEVSLTHHSEKLAIAFAFLNLPEGVPIRVMKNLRV 606

Query: 821 CGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           C DCH AIK IS VTGREIV+RD +RFHH +DG+CSC DYW
Sbjct: 607 CDDCHVAIKLISQVTGREIVVRDVSRFHHFRDGRCSCGDYW 647



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 98/335 (29%), Positives = 166/335 (49%), Gaps = 8/335 (2%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DL SA ++FDKM  +N   W  M+   T +G   D+++ FL M   G  PD F L  V  
Sbjct: 123 DLGSARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFR 182

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            C+ L    SG+Q+H++ +R+G+  D+CVG SL  MY +C   G + +   V   +    
Sbjct: 183 CCAGLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRC---GCLAEGEAVLRALPSLT 239

Query: 352 VMSWTAIITGYVQSGGRDKE-AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           ++S+   I G  Q+G  D E A++ FS M   +VAP+  TF S +  C +L      +QV
Sbjct: 240 IVSFNTTIAGRTQNG--DSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQV 297

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +   +K G      V  SL+ MY+R G + D+ + ++     +L   + M+ A   +   
Sbjct: 298 HAQVIKAGVDKVVPVITSLVHMYSRCGCLGDSERVYDGYCGLDLFLLSAMISACGFHGQG 357

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNA 529
            KA EL  ++ + G   +  TF +LL   S  G   +G +    + K+ GF+ +   YN 
Sbjct: 358 HKAVELFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKTYGFQPSVKHYNC 417

Query: 530 LISMYSRCANVEAAFQVFKEMEDR-NVISWTSMIT 563
           ++ +  R   ++ A  +   M  R + + W ++++
Sbjct: 418 IVDLLGRSGCLDEAEALILSMPVRADGVIWKTLLS 452



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 115/459 (25%), Positives = 202/459 (44%), Gaps = 58/459 (12%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N +  N LI    K GDL  A ++F  M   R++ +W++M++   N G   D++  F+ M
Sbjct: 107 NVMSWNILIGGCIKNGDLGSARELFDKMPT-RNVATWNAMVAGLTNVGLDEDSLQFFLAM 165

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+E+   +V R C+   +V  G  ++ ++++ G  DSD+CVG +L  M+++   
Sbjct: 166 RREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHAYVVRSG-MDSDMCVGNSLAHMYMRCGC 224

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            L     V   +     V +   I   TQ G    A+  F  M      PD  T    +S
Sbjct: 225 -LAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAIS 283

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            CS+L     G+Q+H+  I+ G+   V V  SLV MY++C   G + DS +V+D     +
Sbjct: 284 CCSDLAALAQGQQVHAQVIKAGVDKVVPVITSLVHMYSRC---GCLGDSERVYDGYCGLD 340

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           +   +A+I+      G+  +AV+LF  M+ G   PN  TF ++L AC             
Sbjct: 341 LFLLSAMISA-CGFHGQGHKAVELFKQMMNGGAEPNEVTFLALLYAC------------- 386

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAK 466
                                 + SG  ++  + FE +     F+ ++  YN +VD   +
Sbjct: 387 ----------------------SHSGLKDEGLEFFELMTKTYGFQPSVKHYNCIVDLLGR 424

Query: 467 N--LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN- 523
           +  L+  +A  L   +   GV      + +LLS   +       E+I  R+I+S    + 
Sbjct: 425 SGCLDEAEALILSMPVRADGV-----IWKTLLSACKTQKNFDMAERIAERVIESDPRDSA 479

Query: 524 -HCIYNALISMYSRCANVEAAFQVFKEMEDRNV--ISWT 559
            + + + + +   R  +V    ++ +E + R    +SW 
Sbjct: 480 PYVLLSNIRATSKRWGDVTEVRKIMREKDIRKEPGVSWV 518



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 83/372 (22%), Positives = 160/372 (43%), Gaps = 44/372 (11%)

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           S GR K+A+       +G +  +   F+ + +AC  +    +  Q++  A   G A D  
Sbjct: 25  SSGRLKDALH---HPFRGVLWSDASLFSHIFRACRAI---PLLRQLHAFAATSGAAADRF 78

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
             N+L+  YA  G +  AR  FE + ++N++S+N ++    KN +   A EL  ++    
Sbjct: 79  TTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKMPTRN 138

Query: 485 VGT-------------------------------SAYTFASLLSGASSIGAIGKGEQIHA 513
           V T                                 +   S+    + +  +  G Q+HA
Sbjct: 139 VATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCAGLLDVVSGRQVHA 198

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
            +++SG +S+ C+ N+L  MY RC  +     V + +    ++S+ + I G  ++G +  
Sbjct: 199 YVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSLTIVSFNTTIAGRTQNGDSEG 258

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           ALE F  M    + P+ +T+++ +S CS    +++G +   +   + G+ + +     +V
Sbjct: 259 ALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQG-QQVHAQVIKAGVDKVVPVITSLV 317

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQD 691
            +  R G L ++ E +       D+ +    + AC  HG    G  A E+   +     +
Sbjct: 318 HMYSRCGCLGDS-ERVYDGYCGLDLFLLSAMISACGFHGQ---GHKAVELFKQMMNGGAE 373

Query: 692 PAAHILLSNLYA 703
           P     L+ LYA
Sbjct: 374 PNEVTFLALLYA 385



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 69/283 (24%), Positives = 126/283 (44%), Gaps = 4/283 (1%)

Query: 31  SSSPPFIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           S+   F   PT +    N ++  L N G  + ++     M ++G HPD      + + C 
Sbjct: 126 SARELFDKMPTRNVATWNAMVAGLTNVGLDEDSLQFFLAMRREGMHPDEFGLGSVFRCCA 185

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
              +   G+ VH+ + RS ++ +  + NSL  +Y +CG L E   + +++ +   IVS++
Sbjct: 186 GLLDVVSGRQVHAYVVRSGMDSDMCVGNSLAHMYMRCGCLAEGEAVLRALPSL-TIVSFN 244

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           + I+     G    A+  F  M  +   P+   F + I  CS+   +A G  ++  ++K 
Sbjct: 245 TTIAGRTQNGDSEGALEYFSMMRGVEVAPDVVTFVSAISCCSDLAALAQGQQVHAQVIKA 304

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
           G  D  V V  +L+ M+ +    L  + +V+D     +    + MI+ C   G    A+ 
Sbjct: 305 G-VDKVVPVITSLVHMYSRCGC-LGDSERVYDGYCGLDLFLLSAMISACGFHGQGHKAVE 362

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
           LF  M+  G  P+  T   ++ ACS   L   G +      +T
Sbjct: 363 LFKQMMNGGAEPNEVTFLALLYACSHSGLKDEGLEFFELMTKT 405



 Score = 44.3 bits (103), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 39/158 (24%), Positives = 73/158 (46%), Gaps = 7/158 (4%)

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
           D + +  +S +  + LH      + + A  F+ +     +I  +    Q+HA    SG  
Sbjct: 18  DEFIRLCSSGRLKDALHHPFRGVLWSDASLFSHIFRACRAIPLL---RQLHAFAATSGAA 74

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           ++    N L+  Y+   ++  A  +F+ +  RNV+SW  +I G  K+G    A E+F KM
Sbjct: 75  ADRFTTNNLLLAYADLGDLPTARHLFEGISKRNVMSWNILIGGCIKNGDLGSARELFDKM 134

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
                  N  T+ A+++  ++ GL  +  + F +M  E
Sbjct: 135 PTR----NVATWNAMVAGLTNVGLDEDSLQFFLAMRRE 168


>gi|77552605|gb|ABA95402.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 1000

 Score =  444 bits (1141), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 245/753 (32%), Positives = 425/753 (56%), Gaps = 12/753 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G +++A+     M + G   + + ++ ++  C    N   G  V S +  S L+    
Sbjct: 122 SNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVS 181

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSLI+++   G +++A K+F  M  + D +SW++MIS Y ++G       +F +M   
Sbjct: 182 VANSLITMFGNLGRVHDAEKLFDRM-EEHDTISWNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+     +++  C+++++ + G  I+   L+    DS V V  AL++M+   +  L 
Sbjct: 241 GLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSS-LDSSVTVINALVNMY-SAAGKLS 298

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +F  M+ ++ + W  MI+   Q     DA++    +  +   P+  T S  + ACS
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGACS 358

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                  GK +H+  ++  L  ++ VG SL+ MY KC    S++D+ KVF  M  H+++S
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCN---SMEDAEKVFQSMPTHDIVS 415

Query: 355 WTAIITGY--VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD-SNVAEQVY 411
           +  +I GY  ++ G +   A+++FS M    + PN+ T  ++  +  +  D  N    ++
Sbjct: 416 YNVLIGGYAVLEDGTK---AMQVFSWMRSAGIKPNYITMINIHGSFASSNDLHNYGRPLH 472

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            + ++ G   D+ V NSLI+MYA+ G +E +   F S+  KN+VS+N ++ A  +  + E
Sbjct: 473 AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANVQLGHGE 532

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A +L  +++  G        A  LS  +S+ ++ +G Q+H   +KSG +S+  + NA +
Sbjct: 533 EALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM 592

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  ++   QV  +   R    W ++I+G+AK+G+   A E F +M+A G KP+ +
Sbjct: 593 DMYGKCGKMDEMLQVVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVATGRKPDYV 652

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++A+LSACSHAGL+ +G  ++ SM    G+   ++H  C+VDLLGR G   EA +FI  
Sbjct: 653 TFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAEKFIEE 712

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+  + L+WR+ L + R H + E+G+  A+ +LE DP D +A++LLSNLYA+   W  V
Sbjct: 713 MPVLPNDLIWRSLLSSSRTHKNLEIGRKTAKKLLELDPFDDSAYVLLSNLYATNARWADV 772

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
             +R  MK  N+ K   CSW++  N+V  F +G+  H    +IYA+LD++ LK++E GY+
Sbjct: 773 DKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYI 832

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
            DT+  LH+ +EEQK Q L+ HSEK+A+A+GLI
Sbjct: 833 ADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 865



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 167/588 (28%), Positives = 294/588 (50%), Gaps = 18/588 (3%)

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
           R      G  +H+L  R+ L  N  I  +L+ LY   G +++A ++F  M  +R++VSW+
Sbjct: 56  RDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDAQRLFWEM-PERNVVSWT 114

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           +++ +  + G   +A+  + +M   G   N   F+ V+  C + EN   G  +   ++  
Sbjct: 115 ALMVALSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVS 174

Query: 210 GYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
           G   + V V  +LI MF  G++  +  A K+FD+M E +T+ W  MI+  +  G      
Sbjct: 175 G-LQNQVSVANSLITMF--GNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCF 231

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
            +F DM   G  PD  TL  ++S C+  + F+ G  +HS  +R+ L   V V  +LV+MY
Sbjct: 232 LVFSDMRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMY 291

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           +     G + D+  +F  M   +++SW  +I+ YVQ+     +A+K    +     +PNH
Sbjct: 292 SAA---GKLSDAEFLFWNMSRRDLISWNTMISSYVQN-CNSTDALKTLGQLFHTNESPNH 347

Query: 389 FTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            TF+S L AC   G L+D  +   +      +   L   VGNSLI+MY +   MEDA K 
Sbjct: 348 LTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL---VGNSLITMYGKCNSMEDAEKV 404

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL-SGASSIGA 504
           F+S+   ++VSYN ++  YA   +  KA ++   +   G+  +  T  ++  S ASS   
Sbjct: 405 FQSMPTHDIVSYNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINIHGSFASSNDL 464

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
              G  +HA II++GF S+  + N+LI+MY++C N+E++  +F  + ++N++SW ++I  
Sbjct: 465 HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 524

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
             + G    AL++F  M   G K + +     LS+C+    + EG +    +  + G+  
Sbjct: 525 NVQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDS 583

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
                   +D+ G+ G + E L+ +    +      W T +     +G
Sbjct: 584 DSYVVNAAMDMYGKCGKMDEMLQVVPDQAIRPQQ-CWNTLISGYAKYG 630



 Score =  214 bits (545), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 137/459 (29%), Positives = 239/459 (52%), Gaps = 13/459 (2%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC---SNTENVAIG 199
           R   +W + +S  V  G+   A  M   M E G   + +  ++++ AC      E +A G
Sbjct: 4   RTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGIACG 63

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+    + G    +V +G AL+ ++    + +  A ++F +M E+N V WT ++   +
Sbjct: 64  AAIHALTHRAGLM-GNVYIGTALLHLYGSRGI-VSDAQRLFWEMPERNVVSWTALMVALS 121

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             G   +A+R +  M   G   +    + VVS C  LE    G Q+ S  I +GL   V 
Sbjct: 122 SNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGLQNQVS 181

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  SL+ M+      G V D+ K+FDRM +H+ +SW A+I+ Y   G   K    +FSDM
Sbjct: 182 VANSLITMFGNL---GRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSK-CFLVFSDM 237

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--NSLISMYARSG 437
               + P+  T  S++  C +    + +     H++    +LD  V   N+L++MY+ +G
Sbjct: 238 RHHGLRPDATTLCSLMSVCAS--SDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAG 295

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           ++ DA   F ++  ++L+S+NTM+ +Y +N NS  A + L ++  T    +  TF+S L 
Sbjct: 296 KLSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALG 355

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             SS GA+  G+ +HA +++   + N  + N+LI+MY +C ++E A +VF+ M   +++S
Sbjct: 356 ACSSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDIVS 415

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           +  +I G+A      +A+++F  M + GIKPN IT I +
Sbjct: 416 YNVLIGGYAVLEDGTKAMQVFSWMRSAGIKPNYITMINI 454



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 117/434 (26%), Positives = 214/434 (49%), Gaps = 9/434 (2%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL---ELF 299
           M ++    W   ++ C + G    A  +   M   G     F L+ +V+AC      E  
Sbjct: 1   MADRTPSTWYTAVSGCVRCGRDGTAFEMLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G  +H+   R GL  +V +G +L+ +Y      G V D++++F  M + NV+SWTA++
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGS---RGIVSDAQRLFWEMPERNVVSWTALM 117

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
              + S G  +EA++ +  M +  V  N   FA+V+  CG+L +     QV +  +  G 
Sbjct: 118 VA-LSSNGYLEEALRAYRQMRRDGVPCNANAFATVVSLCGSLENEVPGLQVASQVIVSGL 176

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
                V NSLI+M+   GR+ DA K F+ + E + +S+N M+  Y+      K F +  +
Sbjct: 177 QNQVSVANSLITMFGNLGRVHDAEKLFDRMEEHDTISWNAMISMYSHQGICSKCFLVFSD 236

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +   G+   A T  SL+S  +S      G  IH+  ++S  +S+  + NAL++MYS    
Sbjct: 237 MRHHGLRPDATTLCSLMSVCASSDHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 296

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +  A  +F  M  R++ISW +MI+ + ++  +  AL+   ++      PN +T+ + L A
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNESPNHLTFSSALGA 356

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CS  G + +G K   ++  +  + + +     ++ + G+  S+ +A +  +SMP + D++
Sbjct: 357 CSSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP-THDIV 414

Query: 660 VWRTFLGACRVHGD 673
            +   +G   V  D
Sbjct: 415 SYNVLIGGYAVLED 428


>gi|359492337|ref|XP_002284789.2| PREDICTED: pentatricopeptide repeat-containing protein At5g40410,
           mitochondrial-like [Vitis vinifera]
          Length = 694

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/578 (38%), Positives = 360/578 (62%), Gaps = 8/578 (1%)

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           +L   +S+C+ +   ++   +H+  I++    D  +G  LV MY K   D   +D++++F
Sbjct: 124 SLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYD---EDAQRLF 177

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLD 403
           D M + +++SW ++++G +   G     +  F  M  +    PN  T  SV+ AC ++  
Sbjct: 178 DEMPNKDLVSWNSLMSG-LSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGA 236

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
            +  + ++   VK G +    V NSLI+MY + G ++ A + FE +  ++LVS+N+MV  
Sbjct: 237 LDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVI 296

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           +  N  +EK  +L + ++  G+     T  +LL   +  G   + E IHA I + GF ++
Sbjct: 297 HNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNAD 356

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
             I  AL+++Y++   + A+  +F+E++DR+ I+WT+M+ G+A H     A+++F  M+ 
Sbjct: 357 IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK 416

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
           +G++ + +T+  +LSACSH+GL+ EG K+F  M + + +  R++HY+CMVDLLGRSG L 
Sbjct: 417 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 476

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           +A E I+SMP+     VW   LGACRV+G+ ELGK  AE +L  DP D   +I+LSN+Y+
Sbjct: 477 DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 536

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
           +AG W   + +R  MKER L +  GCS+IE  NK+H+F VG+  HP++ EI+ +L++L  
Sbjct: 537 AAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 596

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           KI+E G  P T FVLH+++EE KV  + +HSEK+A+AFGL+ T    P+ + KNLR+CGD
Sbjct: 597 KIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 656

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH+  K+ S++  R I++RDS RFHH  DG CSC DYW
Sbjct: 657 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 694



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 224/463 (48%), Gaps = 54/463 (11%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+ + +S    +  I + L+S+Y K G   +A ++F  M NK D+VSW+S++S    RG
Sbjct: 141 IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK-DLVSWNSLMSGLSGRG 199

Query: 160 KQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
                ++ F  M  E G  PNE    +V+ AC++   +  G  ++G ++K G       V
Sbjct: 200 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 259

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             +LI+M+ K    L++A ++F++M  ++ V W  M+      G     + LF  M  +G
Sbjct: 260 N-SLINMYGKLGF-LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 317

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD+ T+  ++ AC++  L    + +H++  R G   D+ +  +L+++YAK    G ++
Sbjct: 318 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL---GRLN 374

Query: 339 DSRKVFDRMLDHNVMSWTAIITGY-VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            S  +F+ + D + ++WTA++ GY V + GR  EA+KLF  M++  V  +H TF  +L A
Sbjct: 375 ASEDIFEEIKDRDRIAWTAMLAGYAVHACGR--EAIKLFDLMVKEGVEVDHVTFTHLLSA 432

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEK 452
           C                                   + SG +E+ +K FE +      E 
Sbjct: 433 C-----------------------------------SHSGLVEEGKKYFEIMSEVYRVEP 457

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
            L  Y+ MVD   ++   E A+EL   I+   +  S+  + +LL      G +  G+++ 
Sbjct: 458 RLDHYSCMVDLLGRSGRLEDAYEL---IKSMPMEPSSGVWGALLGACRVYGNVELGKEVA 514

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
            +++ S   S+H  Y  L ++YS       A +V   M++R +
Sbjct: 515 EQLL-SLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 556



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 3/237 (1%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           + T+ G  P+  T   ++ +C        GK +H ++ +  +   + ++NSLI++Y K G
Sbjct: 211 MRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG 270

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            L+ A+++F+ M   R +VSW+SM+  + + G     + +F  M   G  P++    A++
Sbjct: 271 FLDAASQLFEEM-PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALL 329

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           RAC++T        I+ ++ +CG F++D+ +  AL++++ K    L ++  +F+++ +++
Sbjct: 330 RACTDTGLGRQAESIHAYIHRCG-FNADIIIATALLNLYAKLG-RLNASEDIFEEIKDRD 387

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            + WT M+       C R+AI+LF  M+  G   D  T + ++SACS   L   GK+
Sbjct: 388 RIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 444



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 108/214 (50%), Gaps = 3/214 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ H ++G  +K +   +LM + G +PD  T   LL++C  +      + +H+ + R   
Sbjct: 294 VVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGF 353

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             + +I  +L++LY+K G LN +  IF+ + + RD ++W++M++ Y       +AI +F 
Sbjct: 354 NADIIIATALLNLYAKLGRLNASEDIFEEIKD-RDRIAWTAMLAGYAVHACGREAIKLFD 412

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M++ G   +   F+ ++ ACS++  V  G   +  + +    +  +     ++D+  + 
Sbjct: 413 LMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR- 471

Query: 230 SVDLESAYKVFDKMTEKNTVG-WTLMITRCTQLG 262
           S  LE AY++   M  + + G W  ++  C   G
Sbjct: 472 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYG 505


>gi|297814704|ref|XP_002875235.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321073|gb|EFH51494.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 579

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/534 (39%), Positives = 339/534 (63%), Gaps = 9/534 (1%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L++MY K  +   ++D+ ++FD+M   NV+SWT +I+ Y +     K A++L   M++  
Sbjct: 54  LINMYVKFNL---LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQK-ALELLVLMLRDG 109

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           V PN +T++SVL+AC  + D      ++   +K G   D  V ++LI ++A+ G  EDA 
Sbjct: 110 VRPNVYTYSSVLRACNGMSD---VRMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDAL 166

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
             F+ +   + + +N+++  +A+N  S+ A EL   ++  G      T  S+L   + + 
Sbjct: 167 SVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLA 226

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
            +  G Q H  I+K  ++ +  + NAL+ MY +C ++E A +VF +M++R+VI+W++MI+
Sbjct: 227 LLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDARRVFNQMKERDVITWSTMIS 284

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
           G A++G++  AL++F  M + G KPN IT + VL ACSHAGL+ +GW +FRSM   +GI 
Sbjct: 285 GLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGIN 344

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
              EHY CM+DLLG++G L +A++ +  M    D + WRT LGACRV  +  L ++AA+ 
Sbjct: 345 PGREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGACRVQRNMVLAEYAAKK 404

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           ++  DP+D   + +LSN+YA++  W+ V  IRKRM++  + KE GCSWIE + ++H F +
Sbjct: 405 VIALDPEDAGTYTVLSNIYANSQKWDSVEEIRKRMRDIGIKKEPGCSWIEVNKQIHAFII 464

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+ SHP+ +E+  +L+QL  ++   GY+P+TNFVL +LE EQ    L  HSEK+A+AFGL
Sbjct: 465 GDESHPQIVEVNKKLNQLIHRLIGIGYVPETNFVLQDLEGEQMEDSLRHHSEKLALAFGL 524

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           ++    K IR+ KNLR+CGDCH   K  S +  R IV+RD  R+HH +DGKCSC
Sbjct: 525 MTLPSEKVIRIRKNLRICGDCHVFCKLASKLENRNIVIRDPIRYHHFQDGKCSC 578



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/404 (32%), Positives = 218/404 (53%), Gaps = 22/404 (5%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           +D +   G   D  TYS L+K C+  R  H G L+   L  +  +P   ++N LI++Y K
Sbjct: 1   MDSLQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVK 60

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
              LN+A+++F  M  +R+++SW++MIS+Y        A+ + V ML  G  PN Y +S+
Sbjct: 61  FNLLNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSS 119

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+RAC+   +V + H     ++K G  +SDV V  ALID+F K   + E A  VFD+M  
Sbjct: 120 VLRACNGMSDVRMLHC---GIIKEG-LESDVYVRSALIDVFAKLG-EPEDALSVFDEMVT 174

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            + + W  +I    Q      A+ LF  M  +GF+ ++ TL+ V+ AC+ L L   G Q 
Sbjct: 175 GDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLELGMQA 234

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H   ++     D+ +  +LVDMY KC   GS++D+R+VF++M + +V++W+ +I+G  Q+
Sbjct: 235 HVHIVKYD--QDLILNNALVDMYCKC---GSLEDARRVFNQMKERDVITWSTMISGLAQN 289

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSN---VAEQVYTHAVKRGRA 420
            G  +EA+KLF  M      PN+ T   VL AC +  LL+            + +  GR 
Sbjct: 290 -GYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGLLEDGWYYFRSMKKLYGINPGRE 348

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
              C    +I +  ++G+++DA K    +  E + V++ T++ A
Sbjct: 349 HYGC----MIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGA 388



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 89/309 (28%), Positives = 164/309 (53%), Gaps = 27/309 (8%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           QKA+  L LM + G  P++ TYS +L++C    +    +++H  + +  LE +  + ++L
Sbjct: 96  QKALELLVLMLRDGVRPNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSAL 152

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           I +++K G+  +A  +F  M    D + W+S+I  +    +   A+ +F  M   GF   
Sbjct: 153 IDVFAKLGEPEDALSVFDEMVTG-DAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 211

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYK 238
           +   ++V+RAC+    + +G   +  ++K   +D D+ +  AL+DM+ K GS  LE A +
Sbjct: 212 QATLTSVLRACTGLALLELGMQAHVHIVK---YDQDLILNNALVDMYCKCGS--LEDARR 266

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VF++M E++ + W+ MI+   Q G  ++A++LF  M  SG  P+  T+ GV+ ACS   L
Sbjct: 267 VFNQMKERDVITWSTMISGLAQNGYSQEALKLFELMKSSGTKPNYITIVGVLFACSHAGL 326

Query: 299 -------FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDH 350
                  F S K+L  + I  G       GC ++D+  K    G +DD+ K+ + M  + 
Sbjct: 327 LEDGWYYFRSMKKL--YGINPGREH---YGC-MIDLLGKA---GKLDDAVKLLNEMECEP 377

Query: 351 NVMSWTAII 359
           + ++W  ++
Sbjct: 378 DAVTWRTLL 386



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/251 (30%), Positives = 130/251 (51%), Gaps = 11/251 (4%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI+MY +   + DA + F+ + ++N++S+ TM+ AY+K    +KA ELL  +   GV 
Sbjct: 52  NVLINMYVKFNLLNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVR 111

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            + YT++S+L   + +  +     +H  IIK G ES+  + +ALI ++++    E A  V
Sbjct: 112 PNVYTYSSVLRACNGMSDV---RMLHCGIIKEGLESDVYVRSALIDVFAKLGEPEDALSV 168

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F EM   + I W S+I GFA++  +  ALE+F +M   G      T  +VL AC+   L+
Sbjct: 169 FDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALL 228

Query: 607 SEGWKHFRSM--YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
             G +    +  YD+  I+        +VD+  + GSL +A      M    DV+ W T 
Sbjct: 229 ELGMQAHVHIVKYDQDLILNN-----ALVDMYCKCGSLEDARRVFNQMK-ERDVITWSTM 282

Query: 665 LGACRVHGDTE 675
           +     +G ++
Sbjct: 283 ISGLAQNGYSQ 293



 Score = 96.7 bits (239), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 77/288 (26%), Positives = 127/288 (44%), Gaps = 57/288 (19%)

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           ++  G+   + T++ L+    S  A+ +G  I   +  +G +    + N LI+MY +   
Sbjct: 4   LQSHGLWADSATYSELIKCCLSHRAVHEGNLICRHLYFNGHQPMMFLVNVLINMYVKFNL 63

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +  A Q+F +M  RNVISWT+MI+ ++K     +ALE+   ML DG++PN  TY +VL A
Sbjct: 64  LNDAHQLFDQMPQRNVISWTTMISAYSKCKIHQKALELLVLMLRDGVRPNVYTYSSVLRA 123

Query: 600 CS--------HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           C+        H G+I EG         E  +  R    + ++D+  + G   +AL     
Sbjct: 124 CNGMSDVRMLHCGIIKEGL--------ESDVYVR----SALIDVFAKLGEPEDALSVFDE 171

Query: 652 MPLSADVLVWRTFLG-----------------------------------ACRVHGDTEL 676
           M ++ D +VW + +G                                   AC      EL
Sbjct: 172 M-VTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQATLTSVLRACTGLALLEL 230

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
           G  A   I++ D QD   +  L ++Y   G  E    +  +MKER++I
Sbjct: 231 GMQAHVHIVKYD-QDLILNNALVDMYCKCGSLEDARRVFNQMKERDVI 277


>gi|357454909|ref|XP_003597735.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87240430|gb|ABD32288.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486783|gb|AES67986.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 620

 Score =  443 bits (1140), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 217/578 (37%), Positives = 348/578 (60%), Gaps = 5/578 (0%)

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           +  + ++ +C + +    GKQLH+     G+A +  +   LV +YA   V  S+ ++R +
Sbjct: 48  YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYA---VSNSLLNARNL 104

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           FD++   N+  W  +I GY  +G  D  A+ L+  M+   + P++FT   VLKAC  L  
Sbjct: 105 FDKIPKQNLFLWNVLIRGYAWNGPHDN-AIILYHKMLDYGLRPDNFTLPFVLKACSALSA 163

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
                 ++ + +K G   D  VG +LI MYA+ G + DA + F+ +  ++ V +N+M+ A
Sbjct: 164 IGEGRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAA 223

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           YA+N + +++  L  E+   GV  +  T  +++S ++ +  +  G +IH    + GF+SN
Sbjct: 224 YAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSN 283

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
             +  ALI MY++C +V+ A  +F+ + ++ V+SW ++ITG+A HG A  AL++F KM  
Sbjct: 284 DKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDKMRK 343

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
           +  +P+ IT++ VL+ACS   L+ EG   +  M  ++GI   ++HY CM+DLLG  G L 
Sbjct: 344 ED-RPDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHCGQLD 402

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           EA + IR+M +  D  VW   L +C++HG+ EL + A E ++E +P D   +++L+N+YA
Sbjct: 403 EAYDLIRNMSVKPDSGVWGALLNSCKIHGNVELAELALEKLIELEPDDSGNYVILANMYA 462

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
            +G WE V  +R+ M ++ + K   CSWIE  NKV+ F  G+ SH  +  IYAEL +L  
Sbjct: 463 QSGKWEGVEKLRQVMIDKRIKKNIACSWIEVKNKVYAFLAGDVSHSNSDAIYAELKRLEG 522

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
            + E GY PDT  V H++EE++K   +  HSE++A+AFGLISTS    + + KNLR+C D
Sbjct: 523 LMHEAGYAPDTGSVFHDVEEDEKTSMVCSHSERLAIAFGLISTSPGTRLLITKNLRICED 582

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH AIK+IS +  REI +RD NR+H  K G CSC D+W
Sbjct: 583 CHVAIKFISKIMEREITVRDVNRYHSFKHGMCSCGDHW 620



 Score =  174 bits (441), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/475 (27%), Positives = 230/475 (48%), Gaps = 42/475 (8%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+ LL+SCI S+  + GK +H+      +  N  +   L+ LY+    L  A  +F  + 
Sbjct: 50  YTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFDKI- 108

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            K+++  W+ +I  Y   G   +AI ++ +ML+ G  P+ +    V++ACS    +  G 
Sbjct: 109 PKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGR 168

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            I+ +++K G+ + D+ VG ALIDM+ K    +++  +VFDK+  ++ V W  M+    Q
Sbjct: 169 SIHEYVIKSGW-ERDLFVGAALIDMYAKCGCVMDAG-RVFDKIVVRDAVLWNSMLAAYAQ 226

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G P ++I L  +M  +G  P   TL  V+S+ +++     G+++H +  R G   +  V
Sbjct: 227 NGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGFQSNDKV 286

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +L+DMYAKC   GSV  +  +F+R+ +  V+SW AIITGY    G    A+ LF D +
Sbjct: 287 KTALIDMYAKC---GSVKVALALFERLREKRVVSWNAIITGYAMH-GLAVGALDLF-DKM 341

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           + +  P+H TF  VL AC                  RGR LD+  G +L ++  R     
Sbjct: 342 RKEDRPDHITFVGVLAAC-----------------SRGRLLDE--GRALYNLMVR----- 377

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
                 +      +  Y  M+D        ++A++L   I +  V   +  + +LL+   
Sbjct: 378 ------DYGITPTVQHYTCMIDLLGHCGQLDEAYDL---IRNMSVKPDSGVWGALLNSCK 428

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
             G +   E    ++I+   + +   Y  L +MY++    E   ++ + M D+ +
Sbjct: 429 IHGNVELAELALEKLIELEPDDSGN-YVILANMYAQSGKWEGVEKLRQVMIDKRI 482



 Score =  151 bits (382), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 108/414 (26%), Positives = 204/414 (49%), Gaps = 22/414 (5%)

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKV 239
           Y +++++++C +++ +  G  ++      G  ++ D+     L+ ++   S  L +A  +
Sbjct: 48  YGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLAT--KLVHLYAV-SNSLLNARNL 104

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           FDK+ ++N   W ++I      G   +AI L+  M+  G  PD FTL  V+ ACS L   
Sbjct: 105 FDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAI 164

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+ +H + I++G   D+ VG +L+DMYAKC   G V D+ +VFD+++  + + W +++
Sbjct: 165 GEGRSIHEYVIKSGWERDLFVGAALIDMYAKC---GCVMDAGRVFDKIVVRDAVLWNSML 221

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
             Y Q+G  D E++ L  +M    V P   T  +V+ +  ++       +++    + G 
Sbjct: 222 AAYAQNGHPD-ESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGF 280

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
             +D V  +LI MYA+ G ++ A   FE L EK +VS+N ++  YA +  +  A +L  +
Sbjct: 281 QSNDKVKTALIDMYAKCGSVKVALALFERLREKRVVSWNAIITGYAMHGLAVGALDLFDK 340

Query: 480 I--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSR 536
           +  ED        TF  +L+  S    + +G  ++  +++  G       Y  +I +   
Sbjct: 341 MRKEDR---PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGH 397

Query: 537 CANVEAAFQVFKEME---DRNVISWTSMITGFAKHG---FAARALEIFYKMLAD 584
           C  ++ A+ + + M    D  V  W +++     HG    A  ALE   ++  D
Sbjct: 398 CGQLDEAYDLIRNMSVKPDSGV--WGALLNSCKIHGNVELAELALEKLIELEPD 449



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/317 (25%), Positives = 156/317 (49%), Gaps = 5/317 (1%)

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
           H+ + S+L++C +    N  +Q++      G A +  +   L+ +YA S  + +AR  F+
Sbjct: 47  HYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNLFD 106

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            + ++NL  +N ++  YA N   + A  L H++ D G+    +T   +L   S++ AIG+
Sbjct: 107 KIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGE 166

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G  IH  +IKSG+E +  +  ALI MY++C  V  A +VF ++  R+ + W SM+  +A+
Sbjct: 167 GRSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVRDAVLWNSMLAAYAQ 226

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           +G    ++ +  +M A+G++P   T + V+S+ +    +  G +        HG     +
Sbjct: 227 NGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYG-REIHGFGWRHGFQSNDK 285

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
               ++D+  + GS+  AL     +     V+ W   +    +HG   L   A ++  + 
Sbjct: 286 VKTALIDMYAKCGSVKVALALFERLR-EKRVVSWNAIITGYAMHG---LAVGALDLFDKM 341

Query: 688 DPQDPAAHILLSNLYAS 704
             +D   HI    + A+
Sbjct: 342 RKEDRPDHITFVGVLAA 358



 Score =  120 bits (301), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 181/404 (44%), Gaps = 52/404 (12%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G    AI     M   G  PD  T   +LK+C        G+ +H  + +S  E +  +
Sbjct: 126 NGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAIGEGRSIHEYVIKSGWERDLFV 185

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +LI +Y+KCG + +A ++F  +   RD V W+SM+++Y   G   ++I +  EM   G
Sbjct: 186 GAALIDMYAKCGCVMDAGRVFDKI-VVRDAVLWNSMLAAYAQNGHPDESISLCREMAANG 244

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P E     VI + ++   +  G  I+GF  + G F S+  V  ALIDM+ K GSV + 
Sbjct: 245 VRPTEATLVTVISSSADVACLPYGREIHGFGWRHG-FQSNDKVKTALIDMYAKCGSVKV- 302

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +F+++ EK  V W  +IT     G    A+ LF D +     PD  T  GV++ACS
Sbjct: 303 -ALALFERLREKRVVSWNAIITGYAMHGLAVGALDLF-DKMRKEDRPDHITFVGVLAACS 360

Query: 295 ELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
              L   G+ L++  +R  G+   V     ++D+   C                      
Sbjct: 361 RGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHC---------------------- 398

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
                        G+  EA  L  +M    V P+   + ++L +C    +  +AE     
Sbjct: 399 -------------GQLDEAYDLIRNM---SVKPDSGVWGALLNSCKIHGNVELAEL---- 438

Query: 414 AVKRGRALD-DCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
           A+++   L+ D  GN +I  +MYA+SG+ E   K  + + +K +
Sbjct: 439 ALEKLIELEPDDSGNYVILANMYAQSGKWEGVEKLRQVMIDKRI 482



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 94/189 (49%), Gaps = 8/189 (4%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           T+ Y + SLL       A+  G+Q+HA+    G   N  +   L+ +Y+   ++  A  +
Sbjct: 45  TTHYGYTSLLQSCIDSKALNPGKQLHAQFYHLGIAYNQDLATKLVHLYAVSNSLLNARNL 104

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F ++  +N+  W  +I G+A +G    A+ +++KML  G++P+  T   VL ACS    I
Sbjct: 105 FDKIPKQNLFLWNVLIRGYAWNGPHDNAIILYHKMLDYGLRPDNFTLPFVLKACSALSAI 164

Query: 607 SEGWKHFRSMYD---EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
            EG    RS+++   + G  + +   A ++D+  + G + +A      + +  D ++W +
Sbjct: 165 GEG----RSIHEYVIKSGWERDLFVGAALIDMYAKCGCVMDAGRVFDKIVVR-DAVLWNS 219

Query: 664 FLGACRVHG 672
            L A   +G
Sbjct: 220 MLAAYAQNG 228



 Score = 65.1 bits (157), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 91/210 (43%), Gaps = 4/210 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           L  +  +G   ++I     M   G  P   T   ++ S         G+ +H    R   
Sbjct: 221 LAAYAQNGHPDESISLCREMAANGVRPTEATLVTVISSSADVACLPYGREIHGFGWRHGF 280

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           + N  +  +LI +Y+KCG +  A  +F+ +  KR +VSW+++I+ Y   G  V A+ +F 
Sbjct: 281 QSNDKVKTALIDMYAKCGSVKVALALFERLREKR-VVSWNAIITGYAMHGLAVGALDLFD 339

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M +    P+   F  V+ ACS    +  G  +Y  +++       V     +ID+    
Sbjct: 340 KMRKEDR-PDHITFVGVLAACSRGRLLDEGRALYNLMVRDYGITPTVQHYTCMIDLLGHC 398

Query: 230 SVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
              L+ AY +   M+ K   G W  ++  C
Sbjct: 399 G-QLDEAYDLIRNMSVKPDSGVWGALLNSC 427


>gi|302141697|emb|CBI18900.3| unnamed protein product [Vitis vinifera]
          Length = 637

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/578 (38%), Positives = 360/578 (62%), Gaps = 8/578 (1%)

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           +L   +S+C+ +   ++   +H+  I++    D  +G  LV MY K   D   +D++++F
Sbjct: 67  SLVFAISSCTSVSYCSA---IHARVIKSLNYSDGFIGDRLVSMYFKLGYD---EDAQRLF 120

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLD 403
           D M + +++SW ++++G +   G     +  F  M  +    PN  T  SV+ AC ++  
Sbjct: 121 DEMPNKDLVSWNSLMSG-LSGRGYLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGA 179

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
            +  + ++   VK G +    V NSLI+MY + G ++ A + FE +  ++LVS+N+MV  
Sbjct: 180 LDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLGFLDAASQLFEEMPVRSLVSWNSMVVI 239

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           +  N  +EK  +L + ++  G+     T  +LL   +  G   + E IHA I + GF ++
Sbjct: 240 HNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNAD 299

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
             I  AL+++Y++   + A+  +F+E++DR+ I+WT+M+ G+A H     A+++F  M+ 
Sbjct: 300 IIIATALLNLYAKLGRLNASEDIFEEIKDRDRIAWTAMLAGYAVHACGREAIKLFDLMVK 359

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
           +G++ + +T+  +LSACSH+GL+ EG K+F  M + + +  R++HY+CMVDLLGRSG L 
Sbjct: 360 EGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGRSGRLE 419

Query: 644 EALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           +A E I+SMP+     VW   LGACRV+G+ ELGK  AE +L  DP D   +I+LSN+Y+
Sbjct: 420 DAYELIKSMPMEPSSGVWGALLGACRVYGNVELGKEVAEQLLSLDPSDHRNYIMLSNIYS 479

Query: 704 SAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLAL 763
           +AG W   + +R  MKER L +  GCS+IE  NK+H+F VG+  HP++ EI+ +L++L  
Sbjct: 480 AAGLWRDASKVRALMKERRLTRNPGCSFIEHGNKIHRFVVGDQLHPRSDEIHTKLEELIR 539

Query: 764 KIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
           KI+E G  P T FVLH+++EE KV  + +HSEK+A+AFGL+ T    P+ + KNLR+CGD
Sbjct: 540 KIREAGCAPKTEFVLHDIDEEVKVDMINKHSEKLAIAFGLLVTGSGVPLIITKNLRICGD 599

Query: 824 CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           CH+  K+ S++  R I++RDS RFHH  DG CSC DYW
Sbjct: 600 CHSTAKFASLLEKRTIIIRDSKRFHHFADGLCSCRDYW 637



 Score =  152 bits (384), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 224/463 (48%), Gaps = 54/463 (11%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+ + +S    +  I + L+S+Y K G   +A ++F  M NK D+VSW+S++S    RG
Sbjct: 84  IHARVIKSLNYSDGFIGDRLVSMYFKLGYDEDAQRLFDEMPNK-DLVSWNSLMSGLSGRG 142

Query: 160 KQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
                ++ F  M  E G  PNE    +V+ AC++   +  G  ++G ++K G       V
Sbjct: 143 YLGACLNAFCRMRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVV 202

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             +LI+M+ K    L++A ++F++M  ++ V W  M+      G     + LF  M  +G
Sbjct: 203 N-SLINMYGKLGF-LDAASQLFEEMPVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAG 260

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD+ T+  ++ AC++  L    + +H++  R G   D+ +  +L+++YAK    G ++
Sbjct: 261 INPDQATMVALLRACTDTGLGRQAESIHAYIHRCGFNADIIIATALLNLYAKL---GRLN 317

Query: 339 DSRKVFDRMLDHNVMSWTAIITGY-VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            S  +F+ + D + ++WTA++ GY V + GR  EA+KLF  M++  V  +H TF  +L A
Sbjct: 318 ASEDIFEEIKDRDRIAWTAMLAGYAVHACGR--EAIKLFDLMVKEGVEVDHVTFTHLLSA 375

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEK 452
           C                                   + SG +E+ +K FE +      E 
Sbjct: 376 C-----------------------------------SHSGLVEEGKKYFEIMSEVYRVEP 400

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
            L  Y+ MVD   ++   E A+EL   I+   +  S+  + +LL      G +  G+++ 
Sbjct: 401 RLDHYSCMVDLLGRSGRLEDAYEL---IKSMPMEPSSGVWGALLGACRVYGNVELGKEVA 457

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
            +++ S   S+H  Y  L ++YS       A +V   M++R +
Sbjct: 458 EQLL-SLDPSDHRNYIMLSNIYSAAGLWRDASKVRALMKERRL 499



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 129/237 (54%), Gaps = 3/237 (1%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           + T+ G  P+  T   ++ +C        GK +H ++ +  +   + ++NSLI++Y K G
Sbjct: 154 MRTESGRQPNEVTLLSVVSACADMGALDEGKSLHGVVVKLGMSGKAKVVNSLINMYGKLG 213

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            L+ A+++F+ M   R +VSW+SM+  + + G     + +F  M   G  P++    A++
Sbjct: 214 FLDAASQLFEEM-PVRSLVSWNSMVVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALL 272

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
           RAC++T        I+ ++ +CG F++D+ +  AL++++ K    L ++  +F+++ +++
Sbjct: 273 RACTDTGLGRQAESIHAYIHRCG-FNADIIIATALLNLYAKLG-RLNASEDIFEEIKDRD 330

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
            + WT M+       C R+AI+LF  M+  G   D  T + ++SACS   L   GK+
Sbjct: 331 RIAWTAMLAGYAVHACGREAIKLFDLMVKEGVEVDHVTFTHLLSACSHSGLVEEGKK 387



 Score = 76.6 bits (187), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 51/214 (23%), Positives = 108/214 (50%), Gaps = 3/214 (1%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           ++ H ++G  +K +   +LM + G +PD  T   LL++C  +      + +H+ + R   
Sbjct: 237 VVIHNHNGYAEKGMDLFNLMKRAGINPDQATMVALLRACTDTGLGRQAESIHAYIHRCGF 296

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             + +I  +L++LY+K G LN +  IF+ + + RD ++W++M++ Y       +AI +F 
Sbjct: 297 NADIIIATALLNLYAKLGRLNASEDIFEEIKD-RDRIAWTAMLAGYAVHACGREAIKLFD 355

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M++ G   +   F+ ++ ACS++  V  G   +  + +    +  +     ++D+  + 
Sbjct: 356 LMVKEGVEVDHVTFTHLLSACSHSGLVEEGKKYFEIMSEVYRVEPRLDHYSCMVDLLGR- 414

Query: 230 SVDLESAYKVFDKMTEKNTVG-WTLMITRCTQLG 262
           S  LE AY++   M  + + G W  ++  C   G
Sbjct: 415 SGRLEDAYELIKSMPMEPSSGVWGALLGACRVYG 448


>gi|225428647|ref|XP_002281535.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
 gi|297741370|emb|CBI32501.3| unnamed protein product [Vitis vinifera]
          Length = 697

 Score =  443 bits (1139), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/632 (35%), Positives = 375/632 (59%), Gaps = 9/632 (1%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A ++F     KN V WT++I+   +  C  +AI +F +MI+  F P+  T+S V+ A
Sbjct: 72  LADAKQIFHHTPYKNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPA 131

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L L    K +H + +R G   +V V  +LVDMY+K    G +  +R++F+ M + NV
Sbjct: 132 FANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF---GCMGVARQLFESMSERNV 188

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W AI++GY    G  +EA+ LF+ M +  +  + +T  S++ A  ++    V   ++ 
Sbjct: 189 VTWNAIVSGY-SDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHG 247

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             ++ G   D  +  +L+ +Y     ++DA + F  +  K++ ++  M+  ++   + ++
Sbjct: 248 FIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMSVKDVAAWTLMLTGFSSGRHWDR 307

Query: 473 A---FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           A   F  +  I++  + + A     +LS  S  GA+ +G ++HA  IK+ F +N  + +A
Sbjct: 308 AIKHFNKMLGIQNLKLDSIA--LMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSA 365

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           +I MY+ C N+E A + F  M +++V+ W +MI G   +G+   A+++F +M   G+ P+
Sbjct: 366 VIDMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPD 425

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
             T+++VL ACSHAG++ EG + F  M     ++  ++HYAC++D+LGR+G L  A  FI
Sbjct: 426 ESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDILGRAGQLDAAYSFI 485

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            +MP   D  V+ T LGACR+HG+ +LG   ++ I E +P D   ++LLSN+YA AG+WE
Sbjct: 486 NNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWE 545

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V   R  ++ + + K+ G S IE + +++ F  GE  HP+  +I   L  L LKIK+ G
Sbjct: 546 GVKMTRASLRSKRMKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAG 605

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+P+TN +L ++ ++ K   L+ HSEK+A+AFGL+ T     IR+ KNLR C DCHTA K
Sbjct: 606 YVPNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPETIIRITKNLRTCDDCHTASK 665

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++S V GR +V++D+NRFH  +DG CSC DYW
Sbjct: 666 FVSKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  197 bits (500), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 146/506 (28%), Positives = 251/506 (49%), Gaps = 20/506 (3%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+ +  S L  N+ + NSL++ Y  CG L +A +IF     K ++VSW+ +IS      
Sbjct: 43  IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPYK-NVVSWTILISGLAKND 101

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
             V+AI +F EM+   F PN    S+V+ A +N   + I   ++ F ++ G F+ +V V 
Sbjct: 102 CFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG-FEGNVFVE 160

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            AL+DM+ K    +  A ++F+ M+E+N V W  +++  +  G   +AI LF  M   G 
Sbjct: 161 TALVDMYSKFGC-MGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           L D +T+  ++ A   +     G  +H + IRTG   D  +  +L+D+Y        VDD
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVS---HNCVDD 276

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKAC 398
           + +VF  M   +V +WT ++TG+  SG     A+K F+ M+  Q +  +      +L +C
Sbjct: 277 AHRVFSEMSVKDVAAWTLMLTGF-SSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSC 335

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +        +V+  A+K   A +  VG+++I MYA  G +EDA++ F  + EK++V +N
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+     N     A +L  +++ +G+     TF S+L   S  G + +G QI   ++K 
Sbjct: 396 AMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVK- 454

Query: 519 GFESNHCI-----YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK-HGFAA 572
              ++H I     Y  +I +  R   ++AA+     M  +      S + G  + HG   
Sbjct: 455 ---TSHVIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIK 511

Query: 573 RALEIFYKMLADGIKPNGITYIAVLS 598
              EI  K+    ++PN   Y  +LS
Sbjct: 512 LGHEISQKIFE--MEPNDAGYYVLLS 535



 Score =  189 bits (480), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 216/404 (53%), Gaps = 12/404 (2%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+  I +GL  +  +  SL++ Y  C   G + D++++F      NV+SWT +I+G 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYC---GLLADAKQIFHHTPYKNVVSWTILISGL 97

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            ++     EA+ +F +MI G   PN  T +SVL A  NL    +A+ V+   V+ G   +
Sbjct: 98  AKNDCF-VEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN 156

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  +L+ MY++ G M  AR+ FES+ E+N+V++N +V  Y+ +  SE+A +L + +  
Sbjct: 157 VFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRR 216

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G+    YT  SL+  + S+G +  G  IH  II++G+E++  I  AL+ +Y     V+ 
Sbjct: 217 KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDD 276

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACS 601
           A +VF EM  ++V +WT M+TGF+      RA++ F KML    +K + I  + +LS+CS
Sbjct: 277 AHRVFSEMSVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCS 336

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+G + +G +   ++  +      +   + ++D+    G+L +A  F   M    DV+ W
Sbjct: 337 HSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCW 394

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQ--DPAAHILLSNLYA 703
              +    ++G    G  A ++ L+      DP     +S LYA
Sbjct: 395 NAMIAGNGMNG---YGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435



 Score =  169 bits (428), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 222/419 (52%), Gaps = 19/419 (4%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T S +L +        + K VH    R   E N  +  +L+ +YSK G +  A ++
Sbjct: 120 PNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQL 179

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+SM ++R++V+W++++S Y + G   +AI +F  M   G   + Y   ++I A  +   
Sbjct: 180 FESM-SERNVVTWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGC 238

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +G  I+GF+++ GY ++D  +  AL+D++V  +  ++ A++VF +M+ K+   WTLM+
Sbjct: 239 LQVGTGIHGFIIRTGY-ENDKHIKTALMDIYVSHNC-VDDAHRVFSEMSVKDVAAWTLML 296

Query: 256 TRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           T  +       AI+ F  M+ +     D   L G++S+CS       G+++H+ AI+T  
Sbjct: 297 TGFSSGRHWDRAIKHFNKMLGIQNLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTCF 356

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           A ++ VG +++DMYA C   G+++D+++ F  M + +V+ W A+I G   + G   +A+ 
Sbjct: 357 ANNIFVGSAVIDMYANC---GNLEDAKRFFYGMGEKDVVCWNAMIAGNGMN-GYGTDAID 412

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMY 433
           LF  M    + P+  TF SVL AC +        Q++ H VK    + +    + +I + 
Sbjct: 413 LFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSHVIPNLQHYACVIDIL 472

Query: 434 ARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN-------SEKAFELLHEIEDTG 484
            R+G+++ A     ++ F+ +   Y+T++ A   + N       S+K FE+  E  D G
Sbjct: 473 GRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEM--EPNDAG 529



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 60/218 (27%), Positives = 117/218 (53%), Gaps = 3/218 (1%)

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           AS+L+    L D    +Q++   +  G   +  + NSL++ Y   G + DA++ F     
Sbjct: 28  ASILR---KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPY 84

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           KN+VS+  ++   AKN    +A ++  E+       +A T +S+L   +++G I   + +
Sbjct: 85  KNVVSWTILISGLAKNDCFVEAIDVFREMIMGNFKPNAVTISSVLPAFANLGLIRIAKSV 144

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H   ++ GFE N  +  AL+ MYS+   +  A Q+F+ M +RNV++W ++++G++ HGF+
Sbjct: 145 HCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVTWNAIVSGYSDHGFS 204

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
             A+++F  M   G+  +  T ++++ A    G +  G
Sbjct: 205 EEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 6/258 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++AI   +LM +KG   D  T   L+ + +      +G  +H  + R+  E +  I 
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK 261

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD-AIHMFVEMLEL- 174
            +L+ +Y     +++A+++F  M  K D+ +W+ M++ + + G+  D AI  F +ML + 
Sbjct: 262 TALMDIYVSHNCVDDAHRVFSEMSVK-DVAAWTLMLTGF-SSGRHWDRAIKHFNKMLGIQ 319

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               +      ++ +CS++  +  G  ++   +K   F +++ VG A+IDM+     +LE
Sbjct: 320 NLKLDSIALMGILSSCSHSGALQQGRRVHALAIKTC-FANNIFVGSAVIDMYANCG-NLE 377

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A + F  M EK+ V W  MI      G   DAI LFL M  SG  PD  T   V+ ACS
Sbjct: 378 DAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACS 437

Query: 295 ELELFTSGKQLHSWAIRT 312
              +   G Q+    ++T
Sbjct: 438 HAGMVYEGLQIFYHMVKT 455


>gi|212720716|ref|NP_001132746.1| uncharacterized protein LOC100194233 [Zea mays]
 gi|194695290|gb|ACF81729.1| unknown [Zea mays]
          Length = 539

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 213/538 (39%), Positives = 329/538 (61%), Gaps = 4/538 (0%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+  Y K   +G ++ +RK+FD M   NV +W A++ G   SG  ++E++  F  M +  
Sbjct: 6   LIGGYVK---NGDLETARKLFDEMPARNVATWNAMVAGLTNSG-LNEESLGFFFAMRREG 61

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + P+ +   S+ + C  L D     QV+ + V+ G   D CVG+SL  MY R G + D  
Sbjct: 62  MQPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGE 121

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
            A  +L   N+VS NT +    +N ++E A E    +   GV  +A TF S ++  S + 
Sbjct: 122 AALRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLA 181

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           A+ +G+QIHA  IK+G +    +  +L+ MYSRC  +  + +V  E    +++  ++MI+
Sbjct: 182 ALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAMIS 241

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
            +  HG   +A+ +F +M+A G +PN +T++ +L ACSH+GL  EG   F  M   +G+ 
Sbjct: 242 AYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYGLQ 301

Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             ++HY C+VDLLGRSG L EA + I SMP+  D ++W+T L AC+     ++ +  AE 
Sbjct: 302 PSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLSACKTQKKFDMAERIAER 361

Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
           ++E DP D A+++LLSN+ A++  WE V+ +R+ M+E+N+ KE G SW+E   ++H+F  
Sbjct: 362 VIELDPHDSASYVLLSNIRATSSRWEDVSKVRETMREQNVRKEPGVSWVELKGQIHQFCT 421

Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
           G+ SH +  EI   L+++  +I++ GY PD + V H++E+E+K   L  HSEK+A+AF  
Sbjct: 422 GDESHSRQREIVECLEEMMTRIRQCGYAPDMSMVFHDMEDEEKEVSLAHHSEKLAIAFAF 481

Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +S  +  PIRV KNLRVC DCH AIK +S V GREIV+RD +RFHH KDGKCSC DYW
Sbjct: 482 LSLPEGVPIRVMKNLRVCDDCHVAIKLMSKVIGREIVVRDVSRFHHFKDGKCSCGDYW 539



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/345 (27%), Positives = 163/345 (47%), Gaps = 9/345 (2%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI  +VK   DLE+A K+FD+M  +N   W  M+   T  G   +++  F  M   G  P
Sbjct: 6   LIGGYVKNG-DLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQP 64

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D + L  +   C+ L    SG+Q+H++ +R+GL  D+CVG SL  MY +C   G + D  
Sbjct: 65  DEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRC---GFLRDGE 121

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKE-AVKLFSDMIQGQVAPNHFTFASVLKACGN 400
                +   N++S    I+G  Q+G  D E A++ F  M    V  N  TF S + +C +
Sbjct: 122 AALRALPSLNIVSCNTTISGRTQNG--DAEGALEFFCLMRGAGVEANAVTFVSAVTSCSD 179

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L      +Q++  A+K G      V  SL+ MY+R G + D+ +        +LV  + M
Sbjct: 180 LAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDSERVCLEYSGTDLVLCSAM 239

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-G 519
           + AY  + + +KA  L  ++   G   +  TF +LL   S  G   +G      + K+ G
Sbjct: 240 ISAYGFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYACSHSGLKDEGMNCFELMTKTYG 299

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMIT 563
            + +   Y  ++ +  R   +  A  +   M  + + + W ++++
Sbjct: 300 LQPSVKHYTCIVDLLGRSGCLNEAEDLILSMPVQPDGVIWKTLLS 344



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 88/284 (30%), Positives = 145/284 (51%), Gaps = 11/284 (3%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI  Y K GDL  A K+F  M   R++ +W++M++   N G   +++  F  M   G 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEM-PARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 62

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV--DLE 234
            P+EY   ++ R C+   +V  G  ++ ++++ G  D D+CVG +L  M+++     D E
Sbjct: 63  QPDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSG-LDRDMCVGSSLAHMYMRCGFLRDGE 121

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           +A +    +   N V     I+  TQ G    A+  F  M  +G   +  T    V++CS
Sbjct: 122 AALRALPSL---NIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCS 178

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           +L     G+Q+H+ AI+TG+   V V  SLV MY++C   G + DS +V       +++ 
Sbjct: 179 DLAALAQGQQIHALAIKTGVDKVVPVMTSLVHMYSRC---GCLGDSERVCLEYSGTDLVL 235

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            +A+I+ Y    G  ++AV LF  M+     PN  TF ++L AC
Sbjct: 236 CSAMISAY-GFHGHGQKAVGLFKQMMAAGAEPNEVTFLTLLYAC 278



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 53/219 (24%), Positives = 112/219 (51%), Gaps = 1/219 (0%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI  Y ++G +E ARK F+ +  +N+ ++N MV     +  +E++      +   G+ 
Sbjct: 4   NILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQ 63

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              Y   SL    + +  +  G Q+HA +++SG + + C+ ++L  MY RC  +      
Sbjct: 64  PDEYGLGSLFRCCAGLRDVVSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAA 123

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            + +   N++S  + I+G  ++G A  ALE F  M   G++ N +T+++ +++CS    +
Sbjct: 124 LRALPSLNIVSCNTTISGRTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAAL 183

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           ++G +   ++  + G+ + +     +V +  R G L ++
Sbjct: 184 AQG-QQIHALAIKTGVDKVVPVMTSLVHMYSRCGCLGDS 221



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 102/428 (23%), Positives = 179/428 (41%), Gaps = 58/428 (13%)

Query: 36  FIAQPTTSEPLSNRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P  +    N ++  L N G  ++++     M ++G  PD      L + C   R+ 
Sbjct: 23  FDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGMQPDEYGLGSLFRCCAGLRDV 82

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G+ VH+ + RS L+ +  + +SL  +Y +CG L +     +++ +  +IVS ++ IS 
Sbjct: 83  VSGRQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGEAALRALPS-LNIVSCNTTISG 141

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
               G    A+  F  M   G   N   F + + +CS+   +A G  I+   +K G  D 
Sbjct: 142 RTQNGDAEGALEFFCLMRGAGVEANAVTFVSAVTSCSDLAALAQGQQIHALAIKTG-VDK 200

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
            V V  +L+ M+ +    L  + +V  + +  + V  + MI+     G  + A+ LF  M
Sbjct: 201 VVPVMTSLVHMYSRCGC-LGDSERVCLEYSGTDLVLCSAMISAYGFHGHGQKAVGLFKQM 259

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           + +G  P+  T   ++ ACS           HS                           
Sbjct: 260 MAAGAEPNEVTFLTLLYACS-----------HS--------------------------- 281

Query: 335 GSVDDSRKVFDRM-----LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           G  D+    F+ M     L  +V  +T I+    +SG  + EA  L   M    V P+  
Sbjct: 282 GLKDEGMNCFELMTKTYGLQPSVKHYTCIVDLLGRSGCLN-EAEDLILSM---PVQPDGV 337

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALD--DCVGNSLIS-MYARSGRMEDARKAF 446
            + ++L AC      ++AE++    ++    LD  D     L+S + A S R ED  K  
Sbjct: 338 IWKTLLSACKTQKKFDMAERIAERVIE----LDPHDSASYVLLSNIRATSSRWEDVSKVR 393

Query: 447 ESLFEKNL 454
           E++ E+N+
Sbjct: 394 ETMREQNV 401



 Score = 55.8 bits (133), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 2/149 (1%)

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           +N LI  Y +  ++E A ++F EM  RNV +W +M+ G    G    +L  F+ M  +G+
Sbjct: 3   WNILIGGYVKNGDLETARKLFDEMPARNVATWNAMVAGLTNSGLNEESLGFFFAMRREGM 62

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
           +P+     ++   C+    +  G +   +     G+ + M   + +  +  R G L +  
Sbjct: 63  QPDEYGLGSLFRCCAGLRDVVSG-RQVHAYVVRSGLDRDMCVGSSLAHMYMRCGFLRDGE 121

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTE 675
             +R++P S +++   T +     +GD E
Sbjct: 122 AALRALP-SLNIVSCNTTISGRTQNGDAE 149


>gi|449461477|ref|XP_004148468.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
 gi|449515698|ref|XP_004164885.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g39530-like [Cucumis sativus]
          Length = 837

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 250/724 (34%), Positives = 419/724 (57%), Gaps = 13/724 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           G  +KA+    L  Q+     L+ Y L  ++++C++      G  VHS + +S    +  
Sbjct: 120 GYNEKALLYF-LEFQRTCVDKLNEYILASIIRACVQRDGGEPGSQVHSYVIKSGFGEDVY 178

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  SL+ LY+K G++++A  +F  +  K   V+W+++I+ Y   G+   ++ +F  M+E 
Sbjct: 179 VGTSLVVLYAKHGEIDKARLVFDGLVLKTP-VTWTAIITGYTKSGRSEVSLQLFNLMMES 237

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
              P++Y  S+++ ACS    +  G  I+ ++L+      DV     LID + K G V  
Sbjct: 238 NVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSET-KMDVSTYNVLIDFYTKCGRVKA 296

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A  +FD++  KN + WT MI    Q     +A+ L  +M   G+ PD +  S V+++C
Sbjct: 297 GKA--LFDRLDVKNIISWTTMIAGYMQNSYDWEAVELVGEMFRMGWKPDEYACSSVLTSC 354

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
             ++    G+Q+HS+ I+  L  D  V  +L+DMY+KC    ++DD+++VFD +  H+V+
Sbjct: 355 GSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCN---ALDDAKRVFDVVTCHSVV 411

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
            + A+I GY + G     A+++F +M    V+P+  TF S+L     LL   +++Q++  
Sbjct: 412 YYNAMIEGYSRQGYLCG-ALEVFQEMRLKHVSPSFLTFVSLLGLSAALLCLQLSKQIHGL 470

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
            +K G +LD    ++LI +Y++   + DAR  FE    K++V +N++   Y   L SE+A
Sbjct: 471 IIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNSLFSGYNLQLKSEEA 530

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
           F+L  +++ +    + +TFA+L + AS + ++  G+Q H +++K G ES+  I NAL+ M
Sbjct: 531 FKLYSDLQLSRERPNEFTFAALTTAASILASLPHGQQFHNQVMKMGLESDPFITNALVDM 590

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y++C +VE A ++F     ++   W SMI+ +A+HG    AL +F  M+++ I PN +T+
Sbjct: 591 YAKCGSVEEAEKIFSSSVWKDTACWNSMISMYAQHGKVEEALRMFETMVSNNINPNYVTF 650

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           ++VLSACSH G + +G +H+ SM   +GI   +EHYA +V LLGR+G LTEA EFI  M 
Sbjct: 651 VSVLSACSHVGFVEDGLQHYNSM-ARYGIEPGIEHYASVVTLLGRAGRLTEAREFIEKMT 709

Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
           +    LVWR+ L ACRV G+ EL KHAAEM +  DP D  ++++LSN++AS G W  V  
Sbjct: 710 IRPAALVWRSLLSACRVFGNVELAKHAAEMAISIDPMDSGSYVMLSNIFASKGMWGDVKR 769

Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
           +R +M    ++KE G SWIE + +VH F   +  H +T  IY  LD+L  ++K+ G + D
Sbjct: 770 LRLKMDVNGVVKEPGQSWIEVNGEVHIFVSRDKVHDETDLIYLALDELTTQMKDVGCVHD 829

Query: 774 TNFV 777
           T  +
Sbjct: 830 TTIL 833



 Score =  268 bits (685), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 176/595 (29%), Positives = 314/595 (52%), Gaps = 14/595 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL + + +++    + VH  +    L+ +  + N L+  Y K G + +A  +F  M N R
Sbjct: 46  LLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYFKIGSVFDAGTLFDKMPN-R 104

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP---NEYCFSAVIRACSNTENVAIGH 200
           ++VSWSS++S Y   G    A+  F+E      C    NEY  +++IRAC   +    G 
Sbjct: 105 NLVSWSSVVSMYTQLGYNEKALLYFLEFQRT--CVDKLNEYILASIIRACVQRDGGEPGS 162

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++ +++K G F  DV VG +L+ ++ K   +++ A  VFD +  K  V WT +IT  T+
Sbjct: 163 QVHSYVIKSG-FGEDVYVGTSLVVLYAKHG-EIDKARLVFDGLVLKTPVTWTAIITGYTK 220

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G    +++LF  M+ S  +PD++ LS +++ACS L     GKQ+H++ +R+   +DV  
Sbjct: 221 SGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIHAYVLRSETKMDVST 280

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
              L+D Y KC   G V   + +FDR+   N++SWT +I GY+Q+   D EAV+L  +M 
Sbjct: 281 YNVLIDFYTKC---GRVKAGKALFDRLDVKNIISWTTMIAGYMQN-SYDWEAVELVGEMF 336

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           +    P+ +  +SVL +CG++       Q++++ +K     D+ V N+LI MY++   ++
Sbjct: 337 RMGWKPDEYACSSVLTSCGSVDALQHGRQIHSYVIKVCLEHDNFVTNALIDMYSKCNALD 396

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           DA++ F+ +   ++V YN M++ Y++      A E+  E+    V  S  TF SLL  ++
Sbjct: 397 DAKRVFDVVTCHSVVYYNAMIEGYSRQGYLCGALEVFQEMRLKHVSPSFLTFVSLLGLSA 456

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++  +   +QIH  IIK GF  +    +ALI +YS+C+ +  A  VF+   +++++ W S
Sbjct: 457 ALLCLQLSKQIHGLIIKYGFSLDKFTSSALIDVYSKCSCIRDARYVFEGTTNKDIVVWNS 516

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           + +G+     +  A +++  +     +PN  T+ A+ +A S    +  G + F +   + 
Sbjct: 517 LFSGYNLQLKSEEAFKLYSDLQLSRERPNEFTFAALTTAASILASLPHG-QQFHNQVMKM 575

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           G+         +VD+  + GS+ EA E I S  +  D   W + +     HG  E
Sbjct: 576 GLESDPFITNALVDMYAKCGSVEEA-EKIFSSSVWKDTACWNSMISMYAQHGKVE 629



 Score = 53.9 bits (128), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 57/284 (20%), Positives = 116/284 (40%), Gaps = 35/284 (12%)

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           +L       V       A+LL    S  +I    ++H +++  G + +  + N L+  Y 
Sbjct: 27  MLPSFSSQNVKVKGRALANLLLAPVSNKSILYYRKVHCQVVLWGLQYDVFLSNLLLHSYF 86

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI-KPNGITYI 594
           +  +V  A  +F +M +RN++SW+S+++ + + G+  +AL  F +     + K N     
Sbjct: 87  KIGSVFDAGTLFDKMPNRNLVSWSSVVSMYTQLGYNEKALLYFLEFQRTCVDKLNEYILA 146

Query: 595 AVLSAC-----------SHAGLISEGWKH-------FRSMYDEHGIVQRME--------- 627
           +++ AC            H+ +I  G+            +Y +HG + +           
Sbjct: 147 SIIRACVQRDGGEPGSQVHSYVIKSGFGEDVYVGTSLVVLYAKHGEIDKARLVFDGLVLK 206

Query: 628 ---HYACMVDLLGRSGSLTEALEFIRSMPLS---ADVLVWRTFLGACRVHGDTELGKHAA 681
               +  ++    +SG    +L+    M  S    D  V  + L AC V G  + GK   
Sbjct: 207 TPVTWTAIITGYTKSGRSEVSLQLFNLMMESNVIPDKYVLSSILNACSVLGYLKGGKQIH 266

Query: 682 EMILEQDPQ-DPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
             +L  + + D + + +L + Y   G  +    +  R+  +N+I
Sbjct: 267 AYVLRSETKMDVSTYNVLIDFYTKCGRVKAGKALFDRLDVKNII 310


>gi|449434238|ref|XP_004134903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 224/561 (39%), Positives = 347/561 (61%), Gaps = 5/561 (0%)

Query: 303 KQLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           KQ+H+++IR G+   +      L+  +A  ++   +  + ++F+++   N+ +W  +I G
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLI--FALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRG 109

Query: 362 YVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           + +S      AV+LFS M     + P+  TF  + KA   L+D ++ E +++  V+ G  
Sbjct: 110 FAESEN-PSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFD 168

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
               V NSL+ MY+  G  E A + FE +  ++ V++N++++ +A N    +A  L  E+
Sbjct: 169 SLRFVQNSLVHMYSVFGFAESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              GV    +T  SLLS    +GA+  GE++H  ++K G   N    NAL+ +YS+C N 
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A +VF EME+R+V+SWTS+I G A +G    AL++F ++   G+KP+ IT++ VL AC
Sbjct: 289 RDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SH G++ EG+ +FR M +E+GI+ R+EH+ CMVDLL R+G + +A ++IR+MP+  + ++
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVI 408

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           WRT LGAC +HG  ELG+ A   I   + +     +LLSNLYAS   W  V N+RK M  
Sbjct: 409 WRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLM 468

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           + + K  G S +E  N+V++F +G+ SHP++ E YA L ++   +K  GY+P T  VL +
Sbjct: 469 KGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLAD 528

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +EEE+K   L  H+EK+A+AF L++T    PIR+ KNLRVC DCH AIK IS V  REI+
Sbjct: 529 IEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREII 588

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD +RFHH KDG CSC DYW
Sbjct: 589 VRDRSRFHHFKDGSCSCKDYW 609



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 193/375 (51%), Gaps = 20/375 (5%)

Query: 98  KLVHSLLTRSKLEPNSVILNS--LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           K +H+   R  + P +   N   + +L S    ++ A +IF  +    +I +W++MI  +
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQI-QAPNIFTWNTMIRGF 110

Query: 156 VNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
                   A+ +F +M       P+ + F  + +A +   +V++G  I+  +++ G FDS
Sbjct: 111 AESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG-FDS 169

Query: 215 DVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
              V  +L+ M+ V G    ESAY+VF+ M+ ++ V W  +I      G P +A+ L+ +
Sbjct: 170 LRFVQNSLVHMYSVFGFA--ESAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYRE 227

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G  PD FT+  ++SAC EL     G+++H + ++ GL  +     +L+D+Y+KC  
Sbjct: 228 MGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC-- 285

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G+  D++KVFD M + +V+SWT++I G +   G   EA+KLF ++ +  + P+  TF  
Sbjct: 286 -GNFRDAQKVFDEMEERSVVSWTSLIVG-LAVNGLGNEALKLFGELERQGLKPSEITFVG 343

Query: 394 VLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNS--LISMYARSGRMEDARKAFESL 449
           VL AC +  +LD       Y   +K    +   + +   ++ +  R+G++ DA     ++
Sbjct: 344 VLYACSHCGMLDEGFN---YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM 400

Query: 450 -FEKNLVSYNTMVDA 463
               N V + T++ A
Sbjct: 401 PVPPNAVIWRTLLGA 415



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 119/227 (52%), Gaps = 3/227 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  L K+  +  +  LG+ +HS++ R+  +    + NSL+ +YS  G    A ++
Sbjct: 134 PDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVFGFAESAYQV 193

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ M + RD V+W+S+I+ +   G   +A+ ++ EM   G  P+ +   +++ AC     
Sbjct: 194 FEIM-SYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGA 252

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +A+G  ++ +++K G   +      AL+D++ K   +   A KVFD+M E++ V WT +I
Sbjct: 253 LALGERVHMYMVKVGLVQNQHASN-ALLDLYSKCG-NFRDAQKVFDEMEERSVVSWTSLI 310

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
                 G   +A++LF ++   G  P   T  GV+ ACS   +   G
Sbjct: 311 VGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 17/215 (7%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G   +A+     M  +G  PD  T   LL +C+      LG+ VH  + +  L  N   
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+ LYSKCG+  +A K+F  M  +R +VSW+S+I      G   +A+ +F E+   G
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEM-EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFVK 228
             P+E  F  V+ ACS+   +  G          YG L +  +       GC ++D+  +
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH------GC-MVDLLCR 386

Query: 229 GSVDLESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
               +  AY     M    N V W  ++  CT  G
Sbjct: 387 AG-KVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420


>gi|297810061|ref|XP_002872914.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297318751|gb|EFH49173.1| hypothetical protein ARALYDRAFT_327675 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1305

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 260/833 (31%), Positives = 435/833 (52%), Gaps = 82/833 (9%)

Query: 69   MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE-PNSVILNSLISLYSKCG 127
            +  KG + D    +++ + C       LG  +H  L +  L+  ++ ++++L+  Y +C 
Sbjct: 515  LQNKGVNFDEVVLAMVFRICAVLMYRFLGFTIHGGLIKRGLDNSDTRVVSALMGFYGRCV 574

Query: 128  DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
             L+ ANKIF  M  KRD ++W+ ++   +  G    A+ +F  M   G    +     ++
Sbjct: 575  SLDLANKIFDEMP-KRDDLAWNEIVMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLL 633

Query: 188  RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
            + CSN E  A G  I+G++L+ G F+S+V +  +LI M+ +    LES+ KVF+ M ++N
Sbjct: 634  QVCSNKEGFAQGRQIHGYVLRLG-FESNVSMCNSLIVMYSRNG-KLESSRKVFNSMVDRN 691

Query: 248  TVGWTLMITRCTQLG-----------------------------------CPRDAIRLFL 272
               W  +++  T+LG                                     RDAI +  
Sbjct: 692  LSSWNSIVSSYTRLGYVDDAMGLLDEMETCGLKPDIVTWNSLLSGYASKALSRDAIAVLK 751

Query: 273  DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
             + ++G  P+  ++S ++ A  E  L   GK +H + IR  L  DV V  +L+DMY K  
Sbjct: 752  RIQIAGLKPNTSSISSLLQAVYEPGLVKLGKAIHGYVIRNQLWYDVYVETTLIDMYIKT- 810

Query: 333  VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
              G +  +R VFD M + N+++W ++I+G +   G  KEA  L S M +  +  N  T+ 
Sbjct: 811  --GYLPYARMVFDMMDEKNIVAWNSLISG-LSYTGLLKEAEALISRMEKEGIKSNAVTW- 866

Query: 393  SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR----KAFES 448
                                              NSL+S YA  G+ E A     K  ++
Sbjct: 867  ----------------------------------NSLVSGYATWGKTEKALAVVGKMKKN 892

Query: 449  LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
              E N+VS+  ++   +KN N     ++  ++++ GV  ++ T +SLL     +  +  G
Sbjct: 893  GVEPNVVSWTAILSGCSKNGNFGNGLKIFLKMQEEGVSPNSATISSLLRILGCLSLLYSG 952

Query: 509  EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
            +++H+  +K+    +  +  AL+ MY++  ++++A ++F  ++++ + SW  MI G+A  
Sbjct: 953  KEVHSFCLKNNLTRDAHVATALVDMYAKSGDLQSAAEIFWGIKNKPLASWNCMIMGYAMF 1012

Query: 569  GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
                  + +F  ML  GI+P+ IT+ +VLS C ++GL+ EGWK+F  M   +G++  +EH
Sbjct: 1013 RRGEEGIAVFNAMLEAGIEPDAITFTSVLSVCKNSGLVREGWKYFDLMRSHYGVIPTIEH 1072

Query: 629  YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
             +CMV+LLGRSG L EA +FIR+MPL  D  +W  FL +C++H D EL + A + +   +
Sbjct: 1073 CSCMVELLGRSGYLDEAWDFIRTMPLKPDATIWGAFLSSCKIHRDLELAEIAWKRLQVLE 1132

Query: 689  PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
            P + A ++++ NLY++   W  V  IR  M    +  +   SWI+ D  VH F+    +H
Sbjct: 1133 PHNSANYMMMINLYSNLNRWGDVERIRNSMSNNRVRVQDLWSWIQIDQTVHIFYAEGKAH 1192

Query: 749  PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
            P   EIY EL +L  ++K+ GY+PDT  +   + E +K + L  H+EK+A+ +GLI    
Sbjct: 1193 PDEGEIYFELYKLVSEMKKSGYMPDTRCIHQNVSESEKEKLLMGHTEKLAMTYGLIKKKG 1252

Query: 809  SKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              PIRV KN  +C DCHT  KYIS++  REIVL++  R HH +DGKCSCN+ W
Sbjct: 1253 IAPIRVVKNTNLCSDCHTVAKYISVLRNREIVLQEGARVHHFRDGKCSCNNSW 1305



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 139/539 (25%), Positives = 239/539 (44%), Gaps = 78/539 (14%)

Query: 50   LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
            ++ +L  G  +KA+    +M   G      T   LL+ C     F  G+ +H  + R   
Sbjct: 598  VMVNLQSGNWEKAVKLFRVMRFSGAKAYDSTMVKLLQVCSNKEGFAQGRQIHGYVLRLGF 657

Query: 110  EPNSVILNSLISLYSKCGDLNEANKIFKSM------------------------------ 139
            E N  + NSLI +YS+ G L  + K+F SM                              
Sbjct: 658  ESNVSMCNSLIVMYSRNGKLESSRKVFNSMVDRNLSSWNSIVSSYTRLGYVDDAMGLLDE 717

Query: 140  ----GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
                G K DIV+W+S++S Y ++    DAI +   +   G  PN    S++++A      
Sbjct: 718  METCGLKPDIVTWNSLLSGYASKALSRDAIAVLKRIQIAGLKPNTSSISSLLQAVYEPGL 777

Query: 196  VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
            V +G  I+G++++   +  DV V   LIDM++K    L  A  VFD M EKN V W  +I
Sbjct: 778  VKLGKAIHGYVIRNQLW-YDVYVETTLIDMYIKTGY-LPYARMVFDMMDEKNIVAWNSLI 835

Query: 256  TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
            +  +  G  ++A  L   M   G   +  T + +VS  +            +W  +T  A
Sbjct: 836  SGLSYTGLLKEAEALISRMEKEGIKSNAVTWNSLVSGYA------------TWG-KTEKA 882

Query: 316  LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            L V           K   +G            ++ NV+SWTAI++G  ++G      +K+
Sbjct: 883  LAVV---------GKMKKNG------------VEPNVVSWTAILSGCSKNGNFGN-GLKI 920

Query: 376  FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
            F  M +  V+PN  T +S+L+  G L      ++V++  +K     D  V  +L+ MYA+
Sbjct: 921  FLKMQEEGVSPNSATISSLLRILGCLSLLYSGKEVHSFCLKNNLTRDAHVATALVDMYAK 980

Query: 436  SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            SG ++ A + F  +  K L S+N M+  YA     E+   + + + + G+   A TF S+
Sbjct: 981  SGDLQSAAEIFWGIKNKPLASWNCMIMGYAMFRRGEEGIAVFNAMLEAGIEPDAITFTSV 1040

Query: 496  LSGASSIGAIGKGEQIHARIIKSGF----ESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            LS   + G + +G + +  +++S +       HC  + ++ +  R   ++ A+   + M
Sbjct: 1041 LSVCKNSGLVREGWK-YFDLMRSHYGVIPTIEHC--SCMVELLGRSGYLDEAWDFIRTM 1096


>gi|302753382|ref|XP_002960115.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
 gi|300171054|gb|EFJ37654.1| hypothetical protein SELMODRAFT_70183 [Selaginella moellendorffii]
          Length = 653

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 235/654 (35%), Positives = 377/654 (57%), Gaps = 29/654 (4%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD++ ++N   W++++    Q    ++A+ ++ +M+      D +TLS V++AC++
Sbjct: 1   ARQVFDRIKQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTK 60

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC------------------------ 331
           L     G+ +   A   G   DV V  SL+ ++AKC                        
Sbjct: 61  LLDVEEGRMVQRKAEELGFEKDVVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTA 120

Query: 332 ---TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
                 GS+ DS+ +F  M   +V+SW A+I  Y   G  DK+A  LF  M      P+ 
Sbjct: 121 MIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYG-HDKDAFSLFHRMCTLGHTPDI 179

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           +TF+S+L AC +         ++     RG   D  + N+LISMY R G +E AR+ F S
Sbjct: 180 YTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRCGSLESARRYFYS 239

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           + +K L ++NTM+ AYA+    + A  L   +   G     +TF+S++   +S+GA+ +G
Sbjct: 240 IEKKELGAWNTMLAAYAQFDKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREG 299

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           + IH      GFE +  +  AL++MY++C ++  A + F  + +++V+SW++MI   A+H
Sbjct: 300 KFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMIAASAQH 359

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G A  ALE+ + M   GI  N +T  +VL ACSH G + EG  +F  +  + GI +  E+
Sbjct: 360 GHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEEN 419

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
               +DLLGR+G L EA   + +MP     +   T LG C+VHGD   GK   + I+  +
Sbjct: 420 TVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTKRIVALE 479

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P++P +++LL+N+YA+AG W+ VA +R+ M+++ + ++ GCS IE  +K+++F VG+TS+
Sbjct: 480 PENPGSYVLLNNMYAAAGRWDDVAKLRRYMRKKGVKRQTGCSSIEYRDKIYEFSVGDTSN 539

Query: 749 PKTLEIYAELDQLALKIK-EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS 807
           P+ LEI AEL++L  ++K E GY+PDT  V H++ +++K + L  HSEK+A+ FGLI++ 
Sbjct: 540 PRNLEIRAELERLYSRMKEEEGYVPDTRDVFHDVSDDKKEELLKFHSEKMAMGFGLITSP 599

Query: 808 KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
               +R+ KNLRVC DCHT  K  S +TGR I++RD  RFHH + G CSC DYW
Sbjct: 600 PGSTLRIIKNLRVCSDCHTVGKLASKITGRRIIVRDGTRFHHFEGGICSCGDYW 653



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 135/443 (30%), Positives = 220/443 (49%), Gaps = 43/443 (9%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +   Q+A+     M ++    D  T S +L +C +  +   G++V         E +
Sbjct: 23  YVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACTKLLDVEEGRMVQRKAEELGFEKD 82

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDI--------------------------- 145
            V+  SLI L++KCG L EA  +F+SMG  RDI                           
Sbjct: 83  VVVATSLIHLFAKCGCLEEAESVFRSMGAMRDIISVTAMIGAYCGSLKDSKSLFLTMDVK 142

Query: 146 --VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
             VSW++MI++Y   G   DA  +F  M  LG  P+ Y FS+++ AC++ + +  G +++
Sbjct: 143 DVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTPDIYTFSSILGACASPKRLEDGRMLH 202

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
             +   G FD D  +   LI M+ + GS  LESA + F  + +K    W  M+    Q  
Sbjct: 203 VRITARG-FDRDFAMQNNLISMYTRCGS--LESARRYFYSIEKKELGAWNTMLAAYAQFD 259

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             +DA+ L+ +M+L GF PDRFT S VV +C+ L     GK +H  +   G   DV +G 
Sbjct: 260 KGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASLGALREGKFIHECSTSCGFEKDVILGT 319

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +LV+MYAKC   GS+ D++K FD + + +V+SW+A+I    Q  G  +EA++L   M   
Sbjct: 320 ALVNMYAKC---GSLADAKKSFDGISNKDVVSWSAMIAASAQH-GHAEEALELSHLMNLQ 375

Query: 383 QVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
            +A N  T +SVL AC   G L +        +      R  ++ VG   I +  R+G +
Sbjct: 376 GIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGIERDEENTVG--FIDLLGRAGWL 433

Query: 440 EDARKAFESL-FEKNLVSYNTMV 461
           ++A     ++ F+ + V+  T++
Sbjct: 434 KEAEHVLHTMPFKVSFVALVTLL 456



 Score =  162 bits (410), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 224/484 (46%), Gaps = 39/484 (8%)

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A ++F  +  +R+  SWS ++  YV      +A+ ++ EM+      + Y  S+V+ AC+
Sbjct: 1   ARQVFDRI-KQRNAFSWSILVECYVQNAMYQEALEVYKEMVREEISIDAYTLSSVLAACT 59

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE------ 245
              +V  G ++     + G F+ DV V  +LI +F K    LE A  VF  M        
Sbjct: 60  KLLDVEEGRMVQRKAEELG-FEKDVVVATSLIHLFAKCGC-LEEAESVFRSMGAMRDIIS 117

Query: 246 ------------------------KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
                                   K+ V W  MI   T  G  +DA  LF  M   G  P
Sbjct: 118 VTAMIGAYCGSLKDSKSLFLTMDVKDVVSWNAMIAAYTLYGHDKDAFSLFHRMCTLGHTP 177

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D +T S ++ AC+  +    G+ LH      G   D  +  +L+ MY +C   GS++ +R
Sbjct: 178 DIYTFSSILGACASPKRLEDGRMLHVRITARGFDRDFAMQNNLISMYTRC---GSLESAR 234

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           + F  +    + +W  ++  Y Q   + K+A+ L+ +M+     P+ FTF+SV+ +C +L
Sbjct: 235 RYFYSIEKKELGAWNTMLAAYAQF-DKGKDALFLYKNMLLEGFTPDRFTFSSVVDSCASL 293

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
                 + ++  +   G   D  +G +L++MYA+ G + DA+K+F+ +  K++VS++ M+
Sbjct: 294 GALREGKFIHECSTSCGFEKDVILGTALVNMYAKCGSLADAKKSFDGISNKDVVSWSAMI 353

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GF 520
            A A++ ++E+A EL H +   G+  +  T +S+L   S  G + +G      + +  G 
Sbjct: 354 AASAQHGHAEEALELSHLMNLQGIAQNEVTASSVLHACSHGGRLYEGIDYFMGLSQDFGI 413

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFY 579
           E +       I +  R   ++ A  V   M  + + ++  +++ G   HG   R      
Sbjct: 414 ERDEENTVGFIDLLGRAGWLKEAEHVLHTMPFKVSFVALVTLLGGCKVHGDVRRGKAFTK 473

Query: 580 KMLA 583
           +++A
Sbjct: 474 RIVA 477


>gi|356531902|ref|XP_003534515.1| PREDICTED: putative pentatricopeptide repeat-containing protein
            At3g23330-like [Glycine max]
          Length = 1011

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 242/684 (35%), Positives = 383/684 (55%), Gaps = 46/684 (6%)

Query: 222  LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
            L+ ++VK S +++ A K+FD++ ++NT  WT++I+  ++ G      +LF +M   G  P
Sbjct: 330  LLTLYVKSS-NMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGACP 388

Query: 282  DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV-------- 333
            +++TLS +   CS       GK +H+W +R G+  DV +G S++D+Y KC V        
Sbjct: 389  NQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKVFEYAERVF 448

Query: 334  --------------------DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
                                 G V+ S  +F R+   +V+SW  I+ G +Q G  +++A+
Sbjct: 449  ELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFG-YERQAL 507

Query: 374  KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            +    M++     +  TF+  L    +L    +  Q++   +K G   D  + +SL+ MY
Sbjct: 508  EQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLVEMY 567

Query: 434  ARSGRMEDARKAFESL---FEKN-------------LVSYNTMVDAYAKNLNSEKAFELL 477
             + GRM++A    + +   F KN             +VS+  MV  Y  N   E   +  
Sbjct: 568  CKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNGKYEDGLKTF 627

Query: 478  HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
              +    V     T  +++S  ++ G +  G  +HA   K G   +  + ++LI MYS+ 
Sbjct: 628  RLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSLIDMYSKS 687

Query: 538  ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             +++ A+ +F++  + N++ WTSMI+G A HG   +A+ +F +ML  GI PN +T++ VL
Sbjct: 688  GSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNEVTFLGVL 747

Query: 598  SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
            +AC HAGL+ EG ++FR M D + I   +EH   MVDL GR+G LTE   FI    +S  
Sbjct: 748  NACCHAGLLEEGCRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTETKNFIFENGISHL 807

Query: 658  VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
              VW++FL +CR+H + E+GK  +EM+L+  P DP A++LLSN+ AS   W+  A +R  
Sbjct: 808  TSVWKSFLSSCRLHKNVEMGKWVSEMLLQVAPSDPGAYVLLSNMCASNHRWDEAARVRSL 867

Query: 718  MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
            M +R + K+ G SWI+  +++H F +G+ SHP+  EIY+ LD L  ++KE GY  D   V
Sbjct: 868  MHQRGIKKQPGQSWIQLKDQIHTFIMGDRSHPQDEEIYSYLDILIGRLKEIGYSFDVKLV 927

Query: 778  LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
            + ++EEEQ    +  HSEK+AV FG+I+T+   PIR+ KNLR+C DCH  IKY S +  R
Sbjct: 928  MQDVEEEQGEVLISHHSEKLAVVFGIINTANRTPIRIIKNLRICTDCHNFIKYASQLLDR 987

Query: 838  EIVLRDSNRFHHIKDGKCSCNDYW 861
            EI+LRD +RFHH K G CSC DYW
Sbjct: 988  EIILRDIHRFHHFKHGGCSCGDYW 1011



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 229/475 (48%), Gaps = 61/475 (12%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N L++LY K  +++ A K+F  +  +R+  +W+ +IS +   G       +F EM   G 
Sbjct: 328 NYLLTLYVKSSNMDHARKLFDEI-PQRNTQTWTILISGFSRAGSSEVVFKLFREMRAKGA 386

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
           CPN+Y  S++ + CS   N+ +G  ++ ++L+ G  D+DV +G +++D+++K  V  E A
Sbjct: 387 CPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNG-IDADVVLGNSILDLYLKCKV-FEYA 444

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF----------LDMILSGFLPDRF-- 284
            +VF+ M E + V W +MI+   + G    ++ +F           + I+ G +   +  
Sbjct: 445 ERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQFGYER 504

Query: 285 ----TLSGVVSACSELELFTS---------------GKQLHSWAIRTGLALDVCVGCSLV 325
                L  +V   +E  + T                G+QLH   ++ G   D  +  SLV
Sbjct: 505 QALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFGFCRDGFIRSSLV 564

Query: 326 DMYAKCTVDGSVDDSRKVFD----------------RMLDHNVMSWTAIITGYVQSGGRD 369
           +MY KC   G +D++  V                  + L   ++SW  +++GYV + G+ 
Sbjct: 565 EMYCKC---GRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWN-GKY 620

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           ++ +K F  M++  V  +  T  +++ AC N         V+ +  K G  +D  VG+SL
Sbjct: 621 EDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGSSL 680

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MY++SG ++DA   F    E N+V + +M+   A +   ++A  L  E+ + G+  + 
Sbjct: 681 IDMYSKSGSLDDAWTIFRQTNEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQGIIPNE 740

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESN----HCIYNALISMYSRCANV 540
            TF  +L+     G + +G + + R++K  +  N    HC   +++ +Y R  ++
Sbjct: 741 VTFLGVLNACCHAGLLEEGCR-YFRMMKDAYCINPGVEHC--TSMVDLYGRAGHL 792



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 122/458 (26%), Positives = 216/458 (47%), Gaps = 62/458 (13%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  KG  P+  T S L K C    N  LGK VH+ + R+ ++ + V+ NS++ LY KC  
Sbjct: 381 MRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDLYLKCKV 440

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE---------------MLE 173
              A ++F+ M N+ D+VSW+ MIS+Y+  G    ++ MF                 +++
Sbjct: 441 FEYAERVFELM-NEGDVVSWNIMISAYLRAGDVEKSLDMFRRLPYKDVVSWNTIVDGLMQ 499

Query: 174 LGF-------------CPNEY---CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G+             C  E+    FS  +   S+   V +G  ++G +LK G F  D  
Sbjct: 500 FGYERQALEQLYCMVECGTEFSVVTFSIALILSSSLSLVELGRQLHGMVLKFG-FCRDGF 558

Query: 218 VGCALIDMFVK-GSVDLESAY--------------KVFDKMTEKNTVGWTLMITRCTQLG 262
           +  +L++M+ K G +D  S                 V  K  +   V W LM++     G
Sbjct: 559 IRSSLVEMYCKCGRMDNASIVLKDVPLDFLKNGNAGVTCKELKAGIVSWGLMVSGYVWNG 618

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
              D ++ F  M+    + D  T++ ++SAC+   +   G+ +H++  + G  +D  VG 
Sbjct: 619 KYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYVGS 678

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           SL+DMY+K    GS+DD+  +F +  + N++ WT++I+G     G+ K+A+ LF +M+  
Sbjct: 679 SLIDMYSK---SGSLDDAWTIFRQTNEPNIVFWTSMISGCALH-GQGKQAICLFEEMLNQ 734

Query: 383 QVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGR 438
            + PN  TF  VL AC    LL+       Y   +K    ++  V +  S++ +Y R+G 
Sbjct: 735 GIIPNEVTFLGVLNACCHAGLLEEGCR---YFRMMKDAYCINPGVEHCTSMVDLYGRAGH 791

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           + + +     +FE  +    ++  ++  +    K  E+
Sbjct: 792 LTETKNF---IFENGISHLTSVWKSFLSSCRLHKNVEM 826



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 44/168 (26%), Positives = 96/168 (57%)

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           +VK G        N L+++Y +S  M+ ARK F+ + ++N  ++  ++  +++  +SE  
Sbjct: 315 SVKNGSLQTLNSANYLLTLYVKSSNMDHARKLFDEIPQRNTQTWTILISGFSRAGSSEVV 374

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
           F+L  E+   G   + YT +SL    S    +  G+ +HA ++++G +++  + N+++ +
Sbjct: 375 FKLFREMRAKGACPNQYTLSSLFKCCSLDINLQLGKGVHAWMLRNGIDADVVLGNSILDL 434

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           Y +C   E A +VF+ M + +V+SW  MI+ + + G   ++L++F ++
Sbjct: 435 YLKCKVFEYAERVFELMNEGDVVSWNIMISAYLRAGDVEKSLDMFRRL 482



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 100/204 (49%), Gaps = 3/204 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+ +  + T  LM ++    D+ T + ++ +C  +     G+ VH+   +     ++ +
Sbjct: 617 NGKYEDGLKTFRLMVRELVVVDIRTVTTIISACANAGILEFGRHVHAYNHKIGHRIDAYV 676

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            +SLI +YSK G L++A  IF+   N+ +IV W+SMIS     G+   AI +F EML  G
Sbjct: 677 GSSLIDMYSKSGSLDDAWTIFRQT-NEPNIVFWTSMISGCALHGQGKQAICLFEEMLNQG 735

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC-ALIDMFVKGSVDLE 234
             PNE  F  V+ AC +   +  G   Y  ++K  Y  +     C +++D++ +     E
Sbjct: 736 IIPNEVTFLGVLNACCHAGLLEEG-CRYFRMMKDAYCINPGVEHCTSMVDLYGRAGHLTE 794

Query: 235 SAYKVFDKMTEKNTVGWTLMITRC 258
           +   +F+      T  W   ++ C
Sbjct: 795 TKNFIFENGISHLTSVWKSFLSSC 818


>gi|356546093|ref|XP_003541466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33680-like [Glycine max]
          Length = 775

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 251/728 (34%), Positives = 407/728 (55%), Gaps = 26/728 (3%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L  C R +    G+ +H+ +  +    ++ I NSLI+LY+KC   ++AN +F S+ NK D
Sbjct: 17  LVHCTRHKQLRKGRALHARILVTGSFSSTQIANSLINLYAKCSHFSKANLVFDSINNK-D 75

Query: 145 IVSWSSMISSYVNRGKQVDAIHMF-----VEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
           +VSW+ +I+++  +     ++H+      + M      PN +  + V  A S   +   G
Sbjct: 76  VVSWNCLINAFSQQQAHAPSLHVMHLFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAG 135

Query: 200 HIIYGFLLK--CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
              +   +K  C +   DV    +L++M+ K  +  E A  +FD+M E+N V W  MI+ 
Sbjct: 136 RQAHALAVKTACSH---DVFAASSLLNMYCKTGLVFE-ARDLFDEMPERNAVSWATMISG 191

Query: 258 CTQLGCPRDAIRLFLDMI--LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
                   +A  LF  M     G   + F  + V+SA +   L  +G+Q+HS A++ GL 
Sbjct: 192 YASQELADEAFELFKLMRHEEKGKNENEFVFTSVLSALTCYMLVNTGRQVHSLAMKNGLV 251

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
             V V  +LV MY KC   GS++D+ K F+   + N ++W+A++TG+ Q G  DK A+KL
Sbjct: 252 CIVSVANALVTMYVKC---GSLEDALKTFELSGNKNSITWSAMVTGFAQFGDSDK-ALKL 307

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F DM Q    P+ FT   V+ AC +        Q++ +++K G  L   V ++L+ MYA+
Sbjct: 308 FYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVLSALVDMYAK 367

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G + DARK FE + + ++V + +++  Y +N + E A  L  +++  GV  +  T AS+
Sbjct: 368 CGSIVDARKGFECIQQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGVIPNDLTMASV 427

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   S++ A+ +G+Q+HA IIK  F     I +AL +MY++C +++  +++F  M  R+V
Sbjct: 428 LKACSNLAALDQGKQMHAGIIKYNFSLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDV 487

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           ISW +MI+G +++G     LE+F KM  +G KP+ +T++ +LSACSH GL+  GW +F+ 
Sbjct: 488 ISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKM 547

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M+DE  I   +EHYACMVD+L R+G L EA EFI S  +   + +WR  L A + H D +
Sbjct: 548 MFDEFNIAPTVEHYACMVDILSRAGKLHEAKEFIESATVDHGLCLWRILLAASKNHRDYD 607

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           LG +A E ++E    + +A++LLS++Y + G WE V  +R  MK R + KE GCSWIE  
Sbjct: 608 LGAYAGEKLMELGSLESSAYVLLSSIYTALGKWEDVERVRGMMKARGVTKEPGCSWIELK 667

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV--------LHELEEEQKV 787
           +  H F VG+  HP+  EI   L  L   +K+ GY P  + +        L + E+  ++
Sbjct: 668 SLTHVFVVGDNMHPQIDEIRLGLKLLTKLMKDEGYQPLLDSLPPETISDDLKDQEDSHEI 727

Query: 788 QYLFQHSE 795
           Q  F + E
Sbjct: 728 QLRFIYGE 735



 Score =  241 bits (614), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 159/512 (31%), Positives = 270/512 (52%), Gaps = 15/512 (2%)

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           +F   +M  K   P+  T + +  +     +   G+  H+L  ++    +    +SL+++
Sbjct: 101 LFRQLVMAHKTIVPNAHTLTGVFTAASTLSDSRAGRQAHALAVKTACSHDVFAASSLLNM 160

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNE 180
           Y K G + EA  +F  M  +R+ VSW++MIS Y ++    +A  +F  M   E G   NE
Sbjct: 161 YCKTGLVFEARDLFDEM-PERNAVSWATMISGYASQELADEAFELFKLMRHEEKGKNENE 219

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKV 239
           + F++V+ A +    V  G  ++   +K G     V V  AL+ M+VK GS  LE A K 
Sbjct: 220 FVFTSVLSALTCYMLVNTGRQVHSLAMKNGLV-CIVSVANALVTMYVKCGS--LEDALKT 276

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F+    KN++ W+ M+T   Q G    A++LF DM  SG LP  FTL GV++ACS+    
Sbjct: 277 FELSGNKNSITWSAMVTGFAQFGDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAI 336

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+Q+H ++++ G  L + V  +LVDMYAKC   GS+ D+RK F+ +   +V+ WT+II
Sbjct: 337 VEGRQMHGYSLKLGYELQLYVLSALVDMYAKC---GSIVDARKGFECIQQPDVVLWTSII 393

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           TGYVQ+G  +  A+ L+  M  G V PN  T ASVLKAC NL   +  +Q++   +K   
Sbjct: 394 TGYVQNGDYEG-ALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNF 452

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
           +L+  +G++L +MYA+ G ++D  + F  +  ++++S+N M+   ++N    +  EL  +
Sbjct: 453 SLEIPIGSALSAMYAKCGSLDDGYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEK 512

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRC 537
           +   G      TF +LLS  S +G + +G  ++ +++   F     +  Y  ++ + SR 
Sbjct: 513 MCLEGTKPDNVTFVNLLSACSHMGLVDRG-WVYFKMMFDEFNIAPTVEHYACMVDILSRA 571

Query: 538 ANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
             +  A +  +    D  +  W  ++     H
Sbjct: 572 GKLHEAKEFIESATVDHGLCLWRILLAASKNH 603



 Score =  116 bits (290), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 153/312 (49%), Gaps = 18/312 (5%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G   KA+     M Q G  P   T   ++ +C  +     G+ +H    +   E    +L
Sbjct: 299 GDSDKALKLFYDMHQSGELPSEFTLVGVINACSDACAIVEGRQMHGYSLKLGYELQLYVL 358

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           ++L+ +Y+KCG + +A K F+ +  + D+V W+S+I+ YV  G    A++++ +M   G 
Sbjct: 359 SALVDMYAKCGSIVDARKGFECI-QQPDVVLWTSIITGYVQNGDYEGALNLYGKMQLGGV 417

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PN+   ++V++ACSN   +  G  ++  ++K   F  ++ +G AL  M+ K GS+D   
Sbjct: 418 IPNDLTMASVLKACSNLAALDQGKQMHAGIIKYN-FSLEIPIGSALSAMYAKCGSLD--D 474

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
            Y++F +M  ++ + W  MI+  +Q G   + + LF  M L G  PD  T   ++SACS 
Sbjct: 475 GYRIFWRMPARDVISWNAMISGLSQNGRGNEGLELFEKMCLEGTKPDNVTFVNLLSACSH 534

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-----GSVDDSRKVFDR-MLD 349
           + L   G     W +   +  D       V+ YA C VD     G + ++++  +   +D
Sbjct: 535 MGLVDRG-----W-VYFKMMFDEFNIAPTVEHYA-CMVDILSRAGKLHEAKEFIESATVD 587

Query: 350 HNVMSWTAIITG 361
           H +  W  ++  
Sbjct: 588 HGLCLWRILLAA 599



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 40/155 (25%), Positives = 77/155 (49%), Gaps = 1/155 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G  + A+     M   G  P+  T + +LK+C        GK +H+ + +      
Sbjct: 396 YVQNGDYEGALNLYGKMQLGGVIPNDLTMASVLKACSNLAALDQGKQMHAGIIKYNFSLE 455

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I ++L ++Y+KCG L++  +IF  M   RD++SW++MIS     G+  + + +F +M 
Sbjct: 456 IPIGSALSAMYAKCGSLDDGYRIFWRM-PARDVISWNAMISGLSQNGRGNEGLELFEKMC 514

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
             G  P+   F  ++ ACS+   V  G + +  + 
Sbjct: 515 LEGTKPDNVTFVNLLSACSHMGLVDRGWVYFKMMF 549


>gi|225439325|ref|XP_002267596.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g06540-like [Vitis vinifera]
          Length = 623

 Score =  442 bits (1138), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 228/613 (37%), Positives = 359/613 (58%), Gaps = 40/613 (6%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS-VDD 339
           P  F+L      CS+L   T  K +H++ IRT +  DV     L+      +   S +D 
Sbjct: 19  PKLFSLE----TCSDL---THLKIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDY 71

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           + ++F ++ + N+  + A+I G+  S   D +A   +    +  + P++ TF  ++K+C 
Sbjct: 72  ASRIFSQIQNPNLFIFNAMIRGHSGSKNPD-QAFHFYVQSQRQGLLPDNLTFPFLVKSCT 130

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA------------------------- 434
            L   ++  Q + H +K G   D  V NSL+ MYA                         
Sbjct: 131 KLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTS 190

Query: 435 ------RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
                 + G +E ARK F+ + EKNLV+++TM+  YA+N + +KA EL   ++  GV  +
Sbjct: 191 MIRGFNKCGDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRAN 250

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
                S++S  + +GA+  GE+ H  ++K+G   N  +  AL+ MY+RC +++ A  VF+
Sbjct: 251 ETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFE 310

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           ++ +R+ +SWT++I G A HG++ R+L+ F  M+  G+ P  IT+ AVLSACSH GL+  
Sbjct: 311 DLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVER 370

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           G++ F SM  +H +  R+EHY CMVDLLGR+G L EA  F+  MP+  +  VW   LGAC
Sbjct: 371 GFQIFESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGAC 430

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           R+H + E+G+   +++++  PQ    ++LLSN+YA+A  WE V  +R+ MK + L K  G
Sbjct: 431 RIHKNAEIGERVGKILIQLLPQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPG 490

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
            S IE D +VHKF +G++SHP+  +I    +++ ++I+  GY  +T   L +++EE+K  
Sbjct: 491 HSLIELDGRVHKFTIGDSSHPEMDKIERMWEEILMRIRAAGYRGNTADALFDIDEEEKES 550

Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
            L +HSEK+A+AFG++ +    PIR+ KNLRVC DCHTA K IS V GRE+++RD NRFH
Sbjct: 551 ALHRHSEKLAIAFGMMRSEAGTPIRIVKNLRVCEDCHTATKLISKVFGRELIVRDRNRFH 610

Query: 849 HIKDGKCSCNDYW 861
           H + G CSC DYW
Sbjct: 611 HFRQGLCSCMDYW 623



 Score =  145 bits (365), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 97/385 (25%), Positives = 195/385 (50%), Gaps = 47/385 (12%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISL----YSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           K++H+ + R+ +  +    + LI+      S    ++ A++IF  + N  ++  +++MI 
Sbjct: 34  KIIHAYMIRTHIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQIQNP-NLFIFNAMIR 92

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            +        A H +V+    G  P+   F  ++++C+    +++G   +G ++K G F+
Sbjct: 93  GHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHG-FE 151

Query: 214 SDVCVGCALIDMF---------------------------VKG---SVDLESAYKVFDKM 243
            DV V  +L+ M+                           ++G     D+ESA K+FD+M
Sbjct: 152 KDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQM 211

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            EKN V W+ MI+   Q      A+ LF  +   G   +   +  V+S+C+ L     G+
Sbjct: 212 PEKNLVTWSTMISGYAQNNHFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGE 271

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           + H + ++ G+ L++ +G +LVDMYA+C   GS+D +  VF+ + + + +SWTA+I G  
Sbjct: 272 RAHDYVVKNGMTLNLILGTALVDMYARC---GSIDKAVWVFEDLPERDTLSWTALIAGLA 328

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRAL 421
             G  ++ ++K F+ M++  + P   TF +VL AC  G L++     Q++  ++KR   +
Sbjct: 329 MHGYSER-SLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGF--QIF-ESMKRDHRV 384

Query: 422 DDCVGN--SLISMYARSGRMEDARK 444
           +  + +   ++ +  R+G++E+A +
Sbjct: 385 EPRLEHYGCMVDLLGRAGKLEEAER 409



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 123/496 (24%), Positives = 215/496 (43%), Gaps = 54/496 (10%)

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV---KGSVDLESAYKVFDKM 243
           +  CS+  ++ I   I+ ++++  +   DV     LI   V    G+  ++ A ++F ++
Sbjct: 24  LETCSDLTHLKI---IHAYMIRT-HIICDVFAASRLIAFCVDPSSGTSLIDYASRIFSQI 79

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
              N   +  MI   +    P  A   ++     G LPD  T   +V +C++L   + G 
Sbjct: 80  QNPNLFIFNAMIRGHSGSKNPDQAFHFYVQSQRQGLLPDNLTFPFLVKSCTKLHCISMGS 139

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYA-------------------------------KCT 332
           Q H   I+ G   DV V  SLV MYA                               KC 
Sbjct: 140 QAHGHIIKHGFEKDVYVQNSLVHMYATFGDTEAATLIFQRMYYVDVVSWTSMIRGFNKC- 198

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G V+ +RK+FD+M + N+++W+ +I+GY Q+   DK AV+LF  +    V  N     
Sbjct: 199 --GDVESARKLFDQMPEKNLVTWSTMISGYAQNNHFDK-AVELFKVLQSQGVRANETVMV 255

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           SV+ +C +L    + E+ + + VK G  L+  +G +L+ MYAR G ++ A   FE L E+
Sbjct: 256 SVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALVDMYARCGSIDKAVWVFEDLPER 315

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           + +S+  ++   A +  SE++ +    + + G+     TF ++LS  S  G + +G QI 
Sbjct: 316 DTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRDITFTAVLSACSHGGLVERGFQIF 375

Query: 513 ARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGF 570
             + +    E     Y  ++ +  R   +E A +   +M  + N   W +++     H  
Sbjct: 376 ESMKRDHRVEPRLEHYGCMVDLLGRAGKLEEAERFVLKMPVKPNAPVWGALLGACRIHKN 435

Query: 571 A---ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           A    R  +I  ++L     P    Y  +LS         E     R M    G+ +   
Sbjct: 436 AEIGERVGKILIQLL-----PQHSGYYVLLSNIYANAKEWEKVTEMRQMMKAKGLKKPPG 490

Query: 628 HYACMVDLLGRSGSLT 643
           H   +++L GR    T
Sbjct: 491 H--SLIELDGRVHKFT 504



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/267 (26%), Positives = 125/267 (46%), Gaps = 36/267 (13%)

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS------ 124
           ++G  PD  T+  L+KSC +     +G   H  + +   E +  + NSL+ +Y+      
Sbjct: 112 RQGLLPDNLTFPFLVKSCTKLHCISMGSQAHGHIIKHGFEKDVYVQNSLVHMYATFGDTE 171

Query: 125 -------------------------KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
                                    KCGD+  A K+F  M  K ++V+WS+MIS Y    
Sbjct: 172 AATLIFQRMYYVDVVSWTSMIRGFNKCGDVESARKLFDQMPEK-NLVTWSTMISGYAQNN 230

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
               A+ +F  +   G   NE    +VI +C++   + +G   + +++K G    ++ +G
Sbjct: 231 HFDKAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNG-MTLNLILG 289

Query: 220 CALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
            AL+DM+ + GS+D   A  VF+ + E++T+ WT +I      G    +++ F  M+ +G
Sbjct: 290 TALVDMYARCGSID--KAVWVFEDLPERDTLSWTALIAGLAMHGYSERSLKYFATMVEAG 347

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQL 305
             P   T + V+SACS   L   G Q+
Sbjct: 348 LTPRDITFTAVLSACSHGGLVERGFQI 374



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 72/324 (22%), Positives = 134/324 (41%), Gaps = 24/324 (7%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           KA+    ++  +G   +      ++ SC       LG+  H  + ++ +  N ++  +L+
Sbjct: 234 KAVELFKVLQSQGVRANETVMVSVISSCAHLGALELGERAHDYVVKNGMTLNLILGTALV 293

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y++CG +++A  +F+ +  +RD +SW+++I+     G    ++  F  M+E G  P +
Sbjct: 294 DMYARCGSIDKAVWVFEDL-PERDTLSWTALIAGLAMHGYSERSLKYFATMVEAGLTPRD 352

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             F+AV+ ACS+   V  G  I+  + +    +  +     ++D+  +    LE A +  
Sbjct: 353 ITFTAVLSACSHGGLVERGFQIFESMKRDHRVEPRLEHYGCMVDLLGRAG-KLEEAERFV 411

Query: 241 DKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR----FTLSGVVSACSE 295
            KM  K N   W  ++  C          R  +  IL   LP        LS + +   E
Sbjct: 412 LKMPVKPNAPVWGALLGACRIHKNAEIGER--VGKILIQLLPQHSGYYVLLSNIYANAKE 469

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDM---YAKCTVDGSVDDSRKVFDRMLDHNV 352
            E  T  +Q+          L    G SL+++     K T+  S        +RM     
Sbjct: 470 WEKVTEMRQM-----MKAKGLKKPPGHSLIELDGRVHKFTIGDSSHPEMDKIERM----- 519

Query: 353 MSWTAIITGYVQSGGRDKEAVKLF 376
             W  I+     +G R   A  LF
Sbjct: 520 --WEEILMRIRAAGYRGNTADALF 541


>gi|449490721|ref|XP_004158687.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g21065-like [Cucumis sativus]
          Length = 609

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 223/561 (39%), Positives = 347/561 (61%), Gaps = 5/561 (0%)

Query: 303 KQLHSWAIRTGLA-LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           KQ+H+++IR G+   +      L+  +A  ++   +  + ++F+++   N+ +W  +I G
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLI--FALVSLSAPMSFAAQIFNQIQAPNIFTWNTMIRG 109

Query: 362 YVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           + +S      AV+LFS M     + P+  TF  + KA   L+D ++ E +++  V+ G  
Sbjct: 110 FAESEN-PSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFD 168

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
               V NSL+ MY+  G +  A + FE +  ++ V++N++++ +A N    +A  L  E+
Sbjct: 169 SLRFVQNSLVHMYSVLGSLXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYREM 228

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              GV    +T  SLLS    +GA+  GE++H  ++K G   N    NAL+ +YS+C N 
Sbjct: 229 GSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKCGNF 288

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A +VF EME+R+V+SWTS+I G A +G    AL++F ++   G+KP+ IT++ VL AC
Sbjct: 289 RDAQKVFDEMEERSVVSWTSLIVGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYAC 348

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SH G++ EG+ +FR M +E+GI+ R+EH+ CMVDLL R+G + +A ++IR+MP+  + ++
Sbjct: 349 SHCGMLDEGFNYFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNMPVPPNAVI 408

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           WRT LGAC +HG  ELG+ A   I   + +     +LLSNLYAS   W  V N+RK M  
Sbjct: 409 WRTLLGACTIHGHLELGEVARAEIQRLEQRHSGDFVLLSNLYASERRWLDVQNVRKIMLM 468

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           + + K  G S +E  N+V++F +G+ SHP++ E YA L ++   +K  GY+P T  VL +
Sbjct: 469 KGVKKTPGYSLVELKNRVYEFIMGDRSHPQSEETYAMLAKITQLLKIEGYVPRTVNVLAD 528

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +EEE+K   L  H+EK+A+AF L++T    PIR+ KNLRVC DCH AIK IS V  REI+
Sbjct: 529 IEEEEKETALSHHTEKVAIAFMLVNTPPGTPIRIMKNLRVCADCHLAIKLISKVFEREII 588

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD +RFHH KDG CSC DYW
Sbjct: 589 VRDRSRFHHFKDGSCSCKDYW 609



 Score =  147 bits (370), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 105/375 (28%), Positives = 194/375 (51%), Gaps = 20/375 (5%)

Query: 98  KLVHSLLTRSKLEPNSVILNS--LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           K +H+   R  + P +   N   + +L S    ++ A +IF  +    +I +W++MI  +
Sbjct: 52  KQIHAFSIRHGVPPQNPDFNKHLIFALVSLSAPMSFAAQIFNQI-QAPNIFTWNTMIRGF 110

Query: 156 VNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
                   A+ +F +M       P+ + F  + +A +   +V++G  I+  +++ G FDS
Sbjct: 111 AESENPSPAVELFSQMHAASSILPDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNG-FDS 169

Query: 215 DVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
              V  +L+ M+ V GS  L SAY+VF+ M+ ++ V W  +I      G P +A+ L+ +
Sbjct: 170 LRFVQNSLVHMYSVLGS--LXSAYQVFEIMSYRDRVAWNSVINGFALNGMPNEALTLYRE 227

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G  PD FT+  ++SAC EL     G+++H + ++ GL  +     +L+D+Y+KC  
Sbjct: 228 MGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHASNALLDLYSKC-- 285

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G+  D++KVFD M + +V+SWT++I G +   G   EA+KLF ++ +  + P+  TF  
Sbjct: 286 -GNFRDAQKVFDEMEERSVVSWTSLIVG-LAVNGLGNEALKLFGELERQGLKPSEITFVG 343

Query: 394 VLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNS--LISMYARSGRMEDARKAFESL 449
           VL AC +  +LD       Y   +K    +   + +   ++ +  R+G++ DA     ++
Sbjct: 344 VLYACSHCGMLDEGFN---YFRRMKEEYGILPRIEHHGCMVDLLCRAGKVGDAYDYIRNM 400

Query: 450 -FEKNLVSYNTMVDA 463
               N V + T++ A
Sbjct: 401 PVPPNAVIWRTLLGA 415



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/227 (29%), Positives = 120/227 (52%), Gaps = 3/227 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  L K+  +  +  LG+ +HS++ R+  +    + NSL+ +YS  G L  A ++
Sbjct: 134 PDTHTFPFLFKAVAKLMDVSLGEGIHSVVVRNGFDSLRFVQNSLVHMYSVLGSLXSAYQV 193

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ M + RD V+W+S+I+ +   G   +A+ ++ EM   G  P+ +   +++ AC     
Sbjct: 194 FEIM-SYRDRVAWNSVINGFALNGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGA 252

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +A+G  ++ +++K G   +      AL+D++ K   +   A KVFD+M E++ V WT +I
Sbjct: 253 LALGERVHMYMVKVGLVQNQHASN-ALLDLYSKCG-NFRDAQKVFDEMEERSVVSWTSLI 310

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
                 G   +A++LF ++   G  P   T  GV+ ACS   +   G
Sbjct: 311 VGLAVNGLGNEALKLFGELERQGLKPSEITFVGVLYACSHCGMLDEG 357



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 62/215 (28%), Positives = 97/215 (45%), Gaps = 17/215 (7%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G   +A+     M  +G  PD  T   LL +C+      LG+ VH  + +  L  N   
Sbjct: 215 NGMPNEALTLYREMGSEGVEPDGFTMVSLLSACVELGALALGERVHMYMVKVGLVQNQHA 274

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            N+L+ LYSKCG+  +A K+F  M  +R +VSW+S+I      G   +A+ +F E+   G
Sbjct: 275 SNALLDLYSKCGNFRDAQKVFDEM-EERSVVSWTSLIVGLAVNGLGNEALKLFGELERQG 333

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFVK 228
             P+E  F  V+ ACS+   +  G          YG L +  +       GC ++D+  +
Sbjct: 334 LKPSEITFVGVLYACSHCGMLDEGFNYFRRMKEEYGILPRIEHH------GC-MVDLLCR 386

Query: 229 GSVDLESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
               +  AY     M    N V W  ++  CT  G
Sbjct: 387 AG-KVGDAYDYIRNMPVPPNAVIWRTLLGACTIHG 420


>gi|115461454|ref|NP_001054327.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|38345824|emb|CAE01858.2| OSJNBa0070M12.7 [Oryza sativa Japonica Group]
 gi|113565898|dbj|BAF16241.1| Os04g0686500 [Oryza sativa Japonica Group]
 gi|215766744|dbj|BAG98972.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222629815|gb|EEE61947.1| hypothetical protein OsJ_16704 [Oryza sativa Japonica Group]
          Length = 690

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 249/690 (36%), Positives = 394/690 (57%), Gaps = 23/690 (3%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           ++RA +   ++  G  ++  L+K G F SD  +   LIDM+ K    L  A +VFD M E
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLG-FGSDTMLNNNLIDMYAKCG-KLHMAGEVFDGMPE 67

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N V WT ++      G  R+ +RLF +M  SG  P+ FTLS  + AC       +G Q+
Sbjct: 68  RNVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGT--RAGVQI 125

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H   +RTG      V  SLV MY+K    G   D+R+VFD +   N+ +W ++I+GY  +
Sbjct: 126 HGVCVRTGFEGHDVVANSLVVMYSKGRWTG---DARRVFDVIPSRNLATWNSMISGYAHA 182

Query: 366 G-GRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG--RAL 421
           G GRD  ++ +F +M +     P+ FTFAS+LKAC  L  +    QV+     RG   A 
Sbjct: 183 GQGRD--SLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPAS 240

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  +  +L+ +Y +  R+  A + F+ L  +N + + T++  +A+    ++A  L     
Sbjct: 241 NAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMCLFRRFW 300

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
            +GV    +  +S+++  +    + +G+Q+H    K+    +  + N+L+ MY +C    
Sbjct: 301 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 360

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A + F+EM  RNV+SWT+MI G  KHG    A+++F +M  +G++ + + Y+A+LSACS
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACS 420

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+GL+ E  ++F  +  +  +  + EHYACMVDLLGR+G L EA E I SMP+   V VW
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEHYACMVDLLGRAGELREAKELILSMPMEPTVGVW 480

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           +T L ACRVH D  +G+   +++L  D  +P  +++LSN+ A AG W     IR  M+ +
Sbjct: 481 QTLLSACRVHKDVAVGREVGDVLLAVDGDNPVNYVMLSNILAEAGEWRECQGIRGAMRRK 540

Query: 722 NLIKEAGCSWIEADNKVHKFH-VGETSHPKTLEIYAELDQLALKIKE-FGYLPDTNFVLH 779
            L K+ GCSW E D +VH F+  G+ +HP+  +I   L ++  +++E  GY  D    LH
Sbjct: 541 GLRKQGGCSWTEVDKEVHFFYGGGDDAHPQAGDIRRALREVEARMRERLGYSGDARCALH 600

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLI--------STSKSKPIRVFKNLRVCGDCHTAIKYI 831
           +++EE +V+ L +HSE++AV   L+             + +RV+KNLRVCGDCH  +K +
Sbjct: 601 DVDEESRVESLREHSERLAVGLWLLRDGTGDDGGGGGGEVVRVYKNLRVCGDCHEFLKGL 660

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S V  R +V+RD+NRFH  ++G CSC DYW
Sbjct: 661 SAVVRRVVVVRDANRFHRFQNGACSCRDYW 690



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 141/529 (26%), Positives = 262/529 (49%), Gaps = 21/529 (3%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL++  R  +   G  +H+ L +     ++++ N+LI +Y+KCG L+ A ++F  M  +R
Sbjct: 10  LLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKCGKLHMAGEVFDGM-PER 68

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           ++VSW++++  +++ G+  + + +F EM   G  PNE+  SA ++AC       +   I+
Sbjct: 69  NVVSWTALMVGFLHHGEARECLRLFGEMRGSGTSPNEFTLSATLKACGGGTRAGV--QIH 126

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           G  ++ G+   DV V  +L+ M+ KG    + A +VFD +  +N   W  MI+     G 
Sbjct: 127 GVCVRTGFEGHDV-VANSLVVMYSKGRWTGD-ARRVFDVIPSRNLATWNSMISGYAHAGQ 184

Query: 264 PRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL--ALDVCV 320
            RD++ +F +M       PD FT + ++ ACS L     G Q+H+     G+  A +  +
Sbjct: 185 GRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPASNAIL 244

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +L+D+Y KC     +  + +VFD +   N + WT +I G+ Q  G+ KEA+ LF    
Sbjct: 245 AGALLDVYVKCH---RLPVAMQVFDGLERRNAIQWTTVIVGHAQE-GQVKEAMCLFRRFW 300

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              V  +    +SV+    +       +QV+ +  K    LD  V NSL+ MY + G   
Sbjct: 301 SSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVANSLVDMYLKCGLTG 360

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +A + F  +  +N+VS+  M++   K+ +  +A +L  E+++ GV      + +LLS  S
Sbjct: 361 EAGRRFREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALLSACS 420

Query: 501 SIGAIGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
             G + +  +  +RI +      ++ H  Y  ++ +  R   +  A ++   M  +  V 
Sbjct: 421 HSGLVDECRRYFSRICQDRRMRPKAEH--YACMVDLLGRAGELREAKELILSMPMEPTVG 478

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHAG 604
            W ++++    H   A   E+   +LA DG  P  + Y+ + +  + AG
Sbjct: 479 VWQTLLSACRVHKDVAVGREVGDVLLAVDGDNP--VNYVMLSNILAEAG 525



 Score =  187 bits (476), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/435 (28%), Positives = 220/435 (50%), Gaps = 20/435 (4%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           +  R  ++ ++ A +       G QLH+  ++ G   D  +  +L+DMYAKC   G +  
Sbjct: 1   MERRRMIADLLRASARGSSLRGGVQLHAALMKLGFGSDTMLNNNLIDMYAKC---GKLHM 57

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           + +VFD M + NV+SWTA++ G++   G  +E ++LF +M     +PN FT ++ LKACG
Sbjct: 58  AGEVFDGMPERNVVSWTALMVGFLHH-GEARECLRLFGEMRGSGTSPNEFTLSATLKACG 116

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
               + V  Q++   V+ G    D V NSL+ MY++     DAR+ F+ +  +NL ++N+
Sbjct: 117 GGTRAGV--QIHGVCVRTGFEGHDVVANSLVVMYSKGRWTGDARRVFDVIPSRNLATWNS 174

Query: 460 MVDAYAKNLNSEKAFELLHEIEDT-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           M+  YA       +  +  E++         +TFASLL   S +GA  +G Q+HA +   
Sbjct: 175 MISGYAHAGQGRDSLLVFREMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVR 234

Query: 519 GFE--SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           G    SN  +  AL+ +Y +C  +  A QVF  +E RN I WT++I G A+ G    A+ 
Sbjct: 235 GVSPASNAILAGALLDVYVKCHRLPVAMQVFDGLERRNAIQWTTVIVGHAQEGQVKEAMC 294

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDL 635
           +F +  + G++ +G    +V++  +   L+ +G + H  +     G+   + +   +VD+
Sbjct: 295 LFRRFWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPAGLDVSVAN--SLVDM 352

Query: 636 LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ----D 691
             + G   EA    R MP + +V+ W   +     HG    G+ A ++  E   +    D
Sbjct: 353 YLKCGLTGEAGRRFREMP-ARNVVSWTAMINGVGKHGH---GREAIDLFEEMQEEGVEAD 408

Query: 692 PAAHILLSNLYASAG 706
             A++ L +  + +G
Sbjct: 409 EVAYLALLSACSHSG 423



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/244 (26%), Positives = 117/244 (47%), Gaps = 6/244 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP- 111
           H   GR    +F  ++  +    PD  T++ LLK+C        G  VH+ +    + P 
Sbjct: 181 HAGQGRDSLLVFR-EMQRRHDEQPDEFTFASLLKACSGLGAAREGAQVHAAMAVRGVSPA 239

Query: 112 -NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
            N+++  +L+ +Y KC  L  A ++F  +  +R+ + W+++I  +   G+  +A+ +F  
Sbjct: 240 SNAILAGALLDVYVKCHRLPVAMQVFDGL-ERRNAIQWTTVIVGHAQEGQVKEAMCLFRR 298

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
               G   + +  S+V+   ++   V  G  ++ +  K      DV V  +L+DM++K  
Sbjct: 299 FWSSGVRADGHVLSSVVAVFADFALVEQGKQVHCYTAKTPA-GLDVSVANSLVDMYLKCG 357

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           +  E+  + F +M  +N V WT MI    + G  R+AI LF +M   G   D      ++
Sbjct: 358 LTGEAGRR-FREMPARNVVSWTAMINGVGKHGHGREAIDLFEEMQEEGVEADEVAYLALL 416

Query: 291 SACS 294
           SACS
Sbjct: 417 SACS 420


>gi|359482011|ref|XP_002276416.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g11460-like [Vitis vinifera]
          Length = 629

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 234/621 (37%), Positives = 360/621 (57%), Gaps = 13/621 (2%)

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           +  T  W   +    +    ++A+ L+  M+ SG  P+ FT      +C+ L L  +G Q
Sbjct: 18  QNTTASWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQ 77

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN----VMSWTAIIT 360
           LH   I+TG   +  V  SL+ MY KC+   ++  +RKVFD   +H+     + + A+I 
Sbjct: 78  LHGHVIKTGCEPEPFVQTSLISMYCKCS---TIASARKVFDE--NHHSRNLAVCYNALIA 132

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY  +  R  +AV LF  M +  V+ N  T   ++  C   +       ++  +V+ G  
Sbjct: 133 GYSLNS-RFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLD 191

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            D  VGN L++MY R G ++ ARK F+ + EK L+++N M+  YA+N  +    +L  ++
Sbjct: 192 GDLSVGNCLLTMYVRCGSVDFARKLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKM 251

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           E TG+     T   +LS  + +GA   G ++  RI  SGF  N  + NALI+MY+RC N+
Sbjct: 252 EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNL 311

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A  +F  M ++NVISWT++I G+  HG    A+++F +M++    P+G  +++VLSAC
Sbjct: 312 VKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSAC 371

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SHAGL  +G  +F +M  ++G+    EHY+C+VDLLGR+G L EA + I SM +  D  V
Sbjct: 372 SHAGLTEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAV 431

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W   LGAC++H + EL + A E ++E +P +   ++LLSN+++ AG+ E +  +R  M+E
Sbjct: 432 WGALLGACKIHRNVELAELAFEKVIEFEPTNIGYYVLLSNIFSEAGNMEGILRVRVMMRE 491

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           R L KE GCS++E   ++H F  G+ +HP+  EIY  LD L   IK  G   D +    E
Sbjct: 492 RKLKKEPGCSYVEYQGRIHLFLAGDRTHPQAQEIYHMLDGLEDIIKRRGGSNDND---QE 548

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
              E+ +  +  HSEK+A+AFGLI+T     I V KNLRVCGDCH  +K +S +  R++V
Sbjct: 549 SRNEELITGMGVHSEKLAIAFGLINTEPGTEITVIKNLRVCGDCHLFLKLVSEIVDRQLV 608

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD+ RFHH K+G CSC DYW
Sbjct: 609 VRDATRFHHFKNGVCSCKDYW 629



 Score =  191 bits (485), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 224/441 (50%), Gaps = 28/441 (6%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q+A+     M   G+ P+  T+    KSC        G  +H  + ++  EP   +  SL
Sbjct: 38  QEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHVIKTGCEPEPFVQTSL 97

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDI-VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           IS+Y KC  +  A K+F    + R++ V ++++I+ Y    +  DA+ +F +M + G   
Sbjct: 98  ISMYCKCSTIASARKVFDENHHSRNLAVCYNALIAGYSLNSRFSDAVLLFRQMRKEGVSV 157

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
           N      +I  C+   ++  G  ++   ++ G  D D+ VG  L+ M+V+ GSVD   A 
Sbjct: 158 NAVTMLGLIPVCAGPIHLGFGTSLHACSVRFG-LDGDLSVGNCLLTMYVRCGSVDF--AR 214

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           K+FD M EK  + W  MI+   Q G     + L+  M  +G +PD  TL GV+S+C+ L 
Sbjct: 215 KLFDGMPEKGLITWNAMISGYAQNGLAGHVLDLYRKMEFTGIVPDPVTLVGVLSSCAHLG 274

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
              +G+++      +G   +  +  +L++MYA+C   G++  +R +FD M + NV+SWTA
Sbjct: 275 AHAAGREVEQRIELSGFGFNPFLKNALINMYARC---GNLVKARAIFDGMTEKNVISWTA 331

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ--VYTHAV 415
           II GY    G+ + AV+LF +MI     P+   F SVL AC +   + + E+   Y  A+
Sbjct: 332 IIAGYGMH-GQGELAVQLFDEMISSDELPDGAAFVSVLSACSH---AGLTEKGLYYFTAM 387

Query: 416 KRGRALD------DCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNL 468
           +R   L        CV    + +  R+GR+E+ARK   S+  E +   +  ++ A   + 
Sbjct: 388 ERDYGLQPGPEHYSCV----VDLLGRAGRLEEARKLIGSMSVEPDGAVWGALLGACKIHR 443

Query: 469 N---SEKAFELLHEIEDTGVG 486
           N   +E AFE + E E T +G
Sbjct: 444 NVELAELAFEKVIEFEPTNIG 464



 Score =  159 bits (402), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 222/478 (46%), Gaps = 14/478 (2%)

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           SW++ +     +    +A++++ +ML  G  PN + F    ++C++      G  ++G +
Sbjct: 23  SWNARLRELARQRHFQEALNLYCQMLASGDSPNAFTFPFAFKSCASLSLPLAGSQLHGHV 82

Query: 207 LKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCP 264
           +K G  + +  V  +LI M+ K S  + SA KVFD+   +    V +  +I   +     
Sbjct: 83  IKTG-CEPEPFVQTSLISMYCKCST-IASARKVFDENHHSRNLAVCYNALIAGYSLNSRF 140

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
            DA+ LF  M   G   +  T+ G++  C+       G  LH+ ++R GL  D+ VG  L
Sbjct: 141 SDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDGDLSVGNCL 200

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           + MY +C   GSVD +RK+FD M +  +++W A+I+GY Q+ G     + L+  M    +
Sbjct: 201 LTMYVRC---GSVDFARKLFDGMPEKGLITWNAMISGYAQN-GLAGHVLDLYRKMEFTGI 256

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            P+  T   VL +C +L       +V       G   +  + N+LI+MYAR G +  AR 
Sbjct: 257 VPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSGFGFNPFLKNALINMYARCGNLVKARA 316

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F+ + EKN++S+  ++  Y  +   E A +L  E+  +        F S+LS  S  G 
Sbjct: 317 IFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLSACSHAGL 376

Query: 505 IGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMI 562
             KG      + +  G +     Y+ ++ +  R   +E A ++   M  + +   W +++
Sbjct: 377 TEKGLYYFTAMERDYGLQPGPEHYSCVVDLLGRAGRLEEARKLIGSMSVEPDGAVWGALL 436

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC-SHAGLISEGWKHFRSMYDE 619
                H     A   F K++    +P  I Y  +LS   S AG + EG    R M  E
Sbjct: 437 GACKIHRNVELAELAFEKVIE--FEPTNIGYYVLLSNIFSEAGNM-EGILRVRVMMRE 491



 Score =  102 bits (254), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 83/314 (26%), Positives = 145/314 (46%), Gaps = 17/314 (5%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN  R   A+     M ++G   +  T   L+  C    +   G  +H+   R  L+ 
Sbjct: 134 YSLNS-RFSDAVLLFRQMRKEGVSVNAVTMLGLIPVCAGPIHLGFGTSLHACSVRFGLDG 192

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           +  + N L+++Y +CG ++ A K+F  M  K  +++W++MIS Y   G     + ++ +M
Sbjct: 193 DLSVGNCLLTMYVRCGSVDFARKLFDGMPEK-GLITWNAMISGYAQNGLAGHVLDLYRKM 251

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  P+      V+ +C++    A G  +   +   G F  +  +  ALI+M+ +   
Sbjct: 252 EFTGIVPDPVTLVGVLSSCAHLGAHAAGREVEQRIELSG-FGFNPFLKNALINMYARCG- 309

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L  A  +FD MTEKN + WT +I      G    A++LF +MI S  LPD      V+S
Sbjct: 310 NLVKARAIFDGMTEKNVISWTAIIAGYGMHGQGELAVQLFDEMISSDELPDGAAFVSVLS 369

Query: 292 ACSELELFTSG-----KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           ACS   L   G          + ++ G     CV    VD+  +    G ++++RK+   
Sbjct: 370 ACSHAGLTEKGLYYFTAMERDYGLQPGPEHYSCV----VDLLGRA---GRLEEARKLIGS 422

Query: 347 M-LDHNVMSWTAII 359
           M ++ +   W A++
Sbjct: 423 MSVEPDGAVWGALL 436


>gi|449488546|ref|XP_004158080.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g21300-like [Cucumis sativus]
          Length = 762

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 237/723 (32%), Positives = 410/723 (56%), Gaps = 7/723 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+   A+     M   G  PD  T+  ++K+C   ++  +GK+VH  +    L+ +  + 
Sbjct: 37  GQFNYALLFYLKMLGAGVSPDKYTFPYVVKACCGLKSVKMGKIVHETVNLMGLKEDVFVG 96

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +SLI LY++ G L++A  +F ++  K D V W+ M++ YV  G   +AI +F+EM     
Sbjct: 97  SSLIKLYAENGHLSDAQYLFDNIPQK-DSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEI 155

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F+ V+  C++   + +G  ++G  + CG  + D  V   L+ M+ K    L++A
Sbjct: 156 KPNSVTFACVLSVCASEAMLDLGTQLHGIAVGCG-LELDSPVANTLLAMYSKCQC-LQAA 213

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+FD + + + V W  +I+   Q G   +A  LF  MI +G  PD  T +  +   +EL
Sbjct: 214 RKLFDTLPQSDLVSWNGIISGYVQNGLMGEAEHLFRGMISAGIKPDSITFASFLPCVNEL 273

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                 K++H + IR  + LDV +  +L+D+Y KC     V+ ++K   +    + +  T
Sbjct: 274 LSLKHCKEIHGYIIRHAVVLDVFLKSALIDIYFKCR---DVEMAQKNLCQSSSFDTVVCT 330

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +I+GYV +G ++KEA++ F  ++Q ++ P   TF+S+  A   L   N+ ++++   +K
Sbjct: 331 TMISGYVLNG-KNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIK 389

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                   VG++++ MYA+ GR++ A + F  + EK+ + +N+M+ + ++N    +A  L
Sbjct: 390 TKLDEKCHVGSAILDMYAKCGRLDLACRVFNRITEKDAICWNSMITSCSQNGRPGEAINL 449

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
             ++   G      + +  LS  +++ A+  G++IH  +IK    S+    ++LI MY++
Sbjct: 450 FRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLYAESSLIDMYAK 509

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C N+  + +VF  M+++N +SW S+I+ +  HG     L +F++ML +GI+P+ +T++ +
Sbjct: 510 CGNLNFSRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGI 569

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           +SAC HAG + EG +++  M +E+GI  RMEHYAC+ D+ GR+G L EA E I SMP   
Sbjct: 570 ISACGHAGQVDEGIRYYHLMTEEYGIPARMEHYACVADMFGRAGRLHEAFETINSMPFPP 629

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           D  VW T LGAC +HG+ EL + A++ + + DP +   ++LL+N+ A AG W  V  +R 
Sbjct: 630 DAGVWGTLLGACHIHGNVELAEVASKHLFDLDPLNSGYYVLLANVQAGAGKWRKVLKVRS 689

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            MKER + K  G SWIE +N  H F   + SHP T +IY+ LD L L++K+ GY+P    
Sbjct: 690 IMKERGVRKVPGYSWIEVNNATHMFVAADGSHPLTAQIYSVLDSLLLELKKEGYVPQLYL 749

Query: 777 VLH 779
            +H
Sbjct: 750 PMH 752



 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 149/552 (26%), Positives = 283/552 (51%), Gaps = 9/552 (1%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           +Y + G L +A  +F ++       +W+ MI  +   G+   A+  +++ML  G  P++Y
Sbjct: 1   MYVRTGSLKDAKNLFYTL-QLGCTSAWNWMIRGFTMMGQFNYALLFYLKMLGAGVSPDKY 59

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F  V++AC   ++V +G I++  +   G    DV VG +LI ++ +    L  A  +FD
Sbjct: 60  TFPYVVKACCGLKSVKMGKIVHETVNLMG-LKEDVFVGSSLIKLYAENG-HLSDAQYLFD 117

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            + +K++V W +M+    + G   +AI++FL+M  S   P+  T + V+S C+   +   
Sbjct: 118 NIPQKDSVLWNVMLNGYVKNGDSGNAIKIFLEMRHSEIKPNSVTFACVLSVCASEAMLDL 177

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G QLH  A+  GL LD  V  +L+ MY+KC     +  +RK+FD +   +++SW  II+G
Sbjct: 178 GTQLHGIAVGCGLELDSPVANTLLAMYSKCQC---LQAARKLFDTLPQSDLVSWNGIISG 234

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           YVQ+G    EA  LF  MI   + P+  TFAS L     LL     ++++ + ++    L
Sbjct: 235 YVQNGLMG-EAEHLFRGMISAGIKPDSITFASFLPCVNELLSLKHCKEIHGYIIRHAVVL 293

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  + ++LI +Y +   +E A+K        + V   TM+  Y  N  +++A E    + 
Sbjct: 294 DVFLKSALIDIYFKCRDVEMAQKNLCQSSSFDTVVCTTMISGYVLNGKNKEALEAFRWLV 353

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              +  ++ TF+S+    + + A+  G+++H  IIK+  +    + +A++ MY++C  ++
Sbjct: 354 QERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHVGSAILDMYAKCGRLD 413

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF  + +++ I W SMIT  +++G    A+ +F +M  +G + + ++    LSAC+
Sbjct: 414 LACRVFNRITEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEGTRYDCVSISGALSACA 473

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           +   +  G K    +  +  +   +   + ++D+  + G+L  +      M    +V  W
Sbjct: 474 NLPALHYG-KEIHGLMIKGPLRSDLYAESSLIDMYAKCGNLNFSRRVFDRMQEKNEV-SW 531

Query: 662 RTFLGACRVHGD 673
            + + A   HGD
Sbjct: 532 NSIISAYGNHGD 543



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 70/238 (29%), Positives = 131/238 (55%), Gaps = 3/238 (1%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G+ ++A+     + Q+   P   T+S +  +       +LGK +H  + ++KL+    +
Sbjct: 339 NGKNKEALEAFRWLVQERMKPTSVTFSSIFPAFAGLAALNLGKELHGSIIKTKLDEKCHV 398

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            ++++ +Y+KCG L+ A ++F  +  ++D + W+SMI+S    G+  +AI++F +M   G
Sbjct: 399 GSAILDMYAKCGRLDLACRVFNRI-TEKDAICWNSMITSCSQNGRPGEAINLFRQMGMEG 457

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
              +    S  + AC+N   +  G  I+G ++K G   SD+    +LIDM+ K   +L  
Sbjct: 458 TRYDCVSISGALSACANLPALHYGKEIHGLMIK-GPLRSDLYAESSLIDMYAKCG-NLNF 515

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           + +VFD+M EKN V W  +I+     G  ++ + LF +M+ +G  PD  T  G++SAC
Sbjct: 516 SRRVFDRMQEKNEVSWNSIISAYGNHGDLKECLALFHEMLRNGIQPDHVTFLGIISAC 573



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/210 (30%), Positives = 98/210 (46%), Gaps = 13/210 (6%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +GR  +AI     M  +G   D  + S  L +C      H GK +H L+ +  L  +  
Sbjct: 439 QNGRPGEAINLFRQMGMEGTRYDCVSISGALSACANLPALHYGKEIHGLMIKGPLRSDLY 498

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
             +SLI +Y+KCG+LN + ++F  M  K + VSW+S+IS+Y N G   + + +F EML  
Sbjct: 499 AESSLIDMYAKCGNLNFSRRVFDRMQEKNE-VSWNSIISAYGNHGDLKECLALFHEMLRN 557

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-----FDSDVCVGCALIDMFVKG 229
           G  P+   F  +I AC +   V  G I Y  L+   Y      +   CV     DMF + 
Sbjct: 558 GIQPDHVTFLGIISACGHAGQVDEG-IRYYHLMTEEYGIPARMEHYACVA----DMFGRA 612

Query: 230 SVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
              L  A++  + M      G W  ++  C
Sbjct: 613 G-RLHEAFETINSMPFPPDAGVWGTLLGAC 641


>gi|356557279|ref|XP_003546945.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g23330-like [Glycine max]
          Length = 631

 Score =  442 bits (1137), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 214/580 (36%), Positives = 349/580 (60%), Gaps = 5/580 (0%)

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           + +  + ++ +C   +    GKQLH+   + G+A ++ +   LV+ Y+ C    S+ ++ 
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCN---SLRNAH 113

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            +FD++   N+  W  +I  Y  +G  +  A+ L+  M++  + P++FT   VLKAC  L
Sbjct: 114 HLFDKIPKGNLFLWNVLIRAYAWNGPHET-AISLYHQMLEYGLKPDNFTLPFVLKACSAL 172

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
                   ++   ++ G   D  VG +L+ MYA+ G + DAR  F+ + +++ V +N+M+
Sbjct: 173 STIGEGRVIHERVIRSGWERDVFVGAALVDMYAKCGCVVDARHVFDKIVDRDAVLWNSML 232

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
            AYA+N + +++  L  E+   GV  +  T  +++S ++ I  +  G +IH    + GF+
Sbjct: 233 AAYAQNGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQ 292

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
            N  +  ALI MY++C +V+ A  +F+ + ++ V+SW ++ITG+A HG A  AL++F +M
Sbjct: 293 YNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERM 352

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
           + +  +P+ IT++  L+ACS   L+ EG   +  M  +  I   +EHY CMVDLLG  G 
Sbjct: 353 MKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRDCRINPTVEHYTCMVDLLGHCGQ 411

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
           L EA + IR M +  D  VW   L +C+ HG+ EL + A E ++E +P D   +++L+N+
Sbjct: 412 LDEAYDLIRQMDVMPDSGVWGALLNSCKTHGNVELAEVALEKLIELEPDDSGNYVILANM 471

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           YA +G WE VA +R+ M ++ + K   CSWIE  NKV+ F  G+ SHP +  IYAEL +L
Sbjct: 472 YAQSGKWEGVARLRQLMIDKGIKKNIACSWIEVKNKVYAFLSGDVSHPNSGAIYAELKRL 531

Query: 762 ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVC 821
              ++E GY+PDT  V H++EE++K   +  HSE++A+AFGLIST     + + KNLR+C
Sbjct: 532 EGLMREAGYVPDTGSVFHDVEEDEKTDMVCSHSERLAIAFGLISTLPGTRLLITKNLRIC 591

Query: 822 GDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            DCH AIK+IS +T REI +RD NR+HH + G CSC DYW
Sbjct: 592 EDCHVAIKFISKITEREITVRDVNRYHHFRHGLCSCGDYW 631



 Score =  189 bits (480), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 134/478 (28%), Positives = 237/478 (49%), Gaps = 48/478 (10%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+ LL+SCI ++    GK +H+ L +  +  N  +   L++ YS C  L  A+ +F  + 
Sbjct: 61  YASLLESCISAKALEPGKQLHARLCQLGIAYNLDLATKLVNFYSVCNSLRNAHHLFDKI- 119

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            K ++  W+ +I +Y   G    AI ++ +MLE G  P+ +    V++ACS    +  G 
Sbjct: 120 PKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGR 179

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           +I+  +++ G+ + DV VG AL+DM+ K    ++ A  VFDK+ +++ V W  M+    Q
Sbjct: 180 VIHERVIRSGW-ERDVFVGAALVDMYAKCGCVVD-ARHVFDKIVDRDAVLWNSMLAAYAQ 237

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G P +++ L  +M   G  P   TL  V+S+ +++     G+++H +  R G   +  V
Sbjct: 238 NGHPDESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDKV 297

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +L+DMYAKC   GSV  +  +F+R+ +  V+SW AIITGY    G   EA+ LF  M+
Sbjct: 298 KTALIDMYAKC---GSVKVACVLFERLREKRVVSWNAIITGYAMH-GLAVEALDLFERMM 353

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
           + +  P+H TF   L AC                  RGR LD+  G +L ++  R  R+ 
Sbjct: 354 K-EAQPDHITFVGALAAC-----------------SRGRLLDE--GRALYNLMVRDCRI- 392

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE---DTGVGTSAYTFASLLS 497
                        +  Y  MVD        ++A++L+ +++   D+GV      + +LL+
Sbjct: 393 ----------NPTVEHYTCMVDLLGHCGQLDEAYDLIRQMDVMPDSGV------WGALLN 436

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
              + G +   E    ++I+   + +   Y  L +MY++    E   ++ + M D+ +
Sbjct: 437 SCKTHGNVELAEVALEKLIELEPDDSGN-YVILANMYAQSGKWEGVARLRQLMIDKGI 493



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 118/452 (26%), Positives = 217/452 (48%), Gaps = 23/452 (5%)

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N Y +++++ +C + + +  G  ++  L + G    ++ +   L++ F      L +A+ 
Sbjct: 57  NHYYYASLLESCISAKALEPGKQLHARLCQLG-IAYNLDLATKLVN-FYSVCNSLRNAHH 114

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FDK+ + N   W ++I      G    AI L+  M+  G  PD FTL  V+ ACS L  
Sbjct: 115 LFDKIPKGNLFLWNVLIRAYAWNGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALST 174

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G+ +H   IR+G   DV VG +LVDMYAKC   G V D+R VFD+++D + + W ++
Sbjct: 175 IGEGRVIHERVIRSGWERDVFVGAALVDMYAKC---GCVVDARHVFDKIVDRDAVLWNSM 231

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           +  Y Q+G  D E++ L  +M    V P   T  +V+ +  ++       +++    + G
Sbjct: 232 LAAYAQNGHPD-ESLSLCCEMAAKGVRPTEATLVTVISSSADIACLPHGREIHGFGWRHG 290

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              +D V  +LI MYA+ G ++ A   FE L EK +VS+N ++  YA +  + +A +L  
Sbjct: 291 FQYNDKVKTALIDMYAKCGSVKVACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFE 350

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSR 536
            +          TF   L+  S    + +G  ++  +++     N  +  Y  ++ +   
Sbjct: 351 RMMKEA-QPDHITFVGALAACSRGRLLDEGRALYNLMVRD-CRINPTVEHYTCMVDLLGH 408

Query: 537 CANVEAAFQVFKEME---DRNVISWTSMITGFAKHG---FAARALEIFYKMLADGIKPNG 590
           C  ++ A+ + ++M+   D  V  W +++     HG    A  ALE   ++  D    + 
Sbjct: 409 CGQLDEAYDLIRQMDVMPDSGV--WGALLNSCKTHGNVELAEVALEKLIELEPD----DS 462

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
             Y+ + +  + +G   EG    R +  + GI
Sbjct: 463 GNYVILANMYAQSGKW-EGVARLRQLMIDKGI 493



 Score =  118 bits (296), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 105/402 (26%), Positives = 182/402 (45%), Gaps = 48/402 (11%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G  + AI     M + G  PD  T   +LK+C        G+++H  + RS  E +  +
Sbjct: 137 NGPHETAISLYHQMLEYGLKPDNFTLPFVLKACSALSTIGEGRVIHERVIRSGWERDVFV 196

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             +L+ +Y+KCG + +A  +F  + + RD V W+SM+++Y   G   +++ +  EM   G
Sbjct: 197 GAALVDMYAKCGCVVDARHVFDKIVD-RDAVLWNSMLAAYAQNGHPDESLSLCCEMAAKG 255

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P E     VI + ++   +  G  I+GF  + G+  +D  V  ALIDM+ K GSV + 
Sbjct: 256 VRPTEATLVTVISSSADIACLPHGREIHGFGWRHGFQYNDK-VKTALIDMYAKCGSVKV- 313

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +F+++ EK  V W  +IT     G   +A+ LF  M+     PD  T  G ++ACS
Sbjct: 314 -ACVLFERLREKRVVSWNAIITGYAMHGLAVEALDLFERMMKEA-QPDHITFVGALAACS 371

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              L   G+ L++  +R                   C ++ +V+    + D +L H    
Sbjct: 372 RGRLLDEGRALYNLMVR------------------DCRINPTVEHYTCMVD-LLGH---- 408

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
                       G+  EA  L   M    V P+   + ++L +C    +  +AE      
Sbjct: 409 -----------CGQLDEAYDLIRQM---DVMPDSGVWGALLNSCKTHGNVELAEVALEKL 454

Query: 415 VKRGRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
           ++      D  GN +I  +MYA+SG+ E   +  + + +K +
Sbjct: 455 IELE---PDDSGNYVILANMYAQSGKWEGVARLRQLMIDKGI 493


>gi|147855060|emb|CAN82371.1| hypothetical protein VITISV_027622 [Vitis vinifera]
          Length = 697

 Score =  442 bits (1136), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 222/630 (35%), Positives = 372/630 (59%), Gaps = 5/630 (0%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A ++F     KN V WT++I+   +  C  +AI +F +M +  F P+  T+S V+ A
Sbjct: 72  LADAKQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPA 131

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
            + L L    K +H + +R G   +V V  +LVDMY+K    G +  +R++F+ M + NV
Sbjct: 132 FANLGLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKF---GCMGVARQLFESMSERNV 188

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW AI++GY    G  +EA+ LF+ M +  +  + +T  S++ A  ++    V   ++ 
Sbjct: 189 VSWNAIVSGY-SDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHG 247

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             ++ G   D  +  +L+ +Y     ++DA + F  +F K++ ++  M+  ++   + ++
Sbjct: 248 FIIRTGYENDKHIKTALMDIYVSHNCVDDAHRVFSEMFVKDVAAWTLMLTGFSSGRHWDR 307

Query: 473 AFELLHEIEDT-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           A +  +++     +   +     +LS  S  GA+ +G ++HA  IK+ F +N  + +A+I
Sbjct: 308 AIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTCFANNIFVGSAVI 367

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY+ C N+E A + F  M +++V+ W +MI G   +G+   A+++F +M   G+ P+  
Sbjct: 368 DMYANCGNLEDAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDES 427

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T+++VL ACSHAG++ EG + F  M      +  ++HYAC++D+LGR+G L  A  FI +
Sbjct: 428 TFVSVLYACSHAGMVYEGLQIFYHMVKTSHDIPNLQHYACVIDILGRAGQLDAAYSFINN 487

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP   D  V+ T LGACR+HG+ +LG   ++ I E +P D   ++LLSN+YA AG+WE V
Sbjct: 488 MPFQPDFDVYSTLLGACRIHGNIKLGHEISQKIFEMEPNDAGYYVLLSNMYALAGNWEGV 547

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
              R  ++ + L K+ G S IE + +++ F  GE  HP+  +I   L  L LKIK+ GY+
Sbjct: 548 KMTRASLRSKRLKKDPGFSSIEINQEIYTFMAGEKDHPQYFKIEGILKGLILKIKKAGYV 607

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
           P+TN +L ++ ++ K   L+ HSEK+A+AFGL+ T     IR+ KNLR C DCH+A K++
Sbjct: 608 PNTNVLLQDVSDDMKKDILYHHSEKMAIAFGLMRTKPGTIIRITKNLRTCNDCHSASKFV 667

Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S V GR +V++D+NRFH  +DG CSC DYW
Sbjct: 668 SKVFGRVLVIKDANRFHVFQDGVCSCRDYW 697



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 145/502 (28%), Positives = 249/502 (49%), Gaps = 12/502 (2%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+ +  S L  N+ + NSL++ Y  CG L +A +IF     K ++VSW+ +IS      
Sbjct: 43  IHAQIITSGLTHNTFLSNSLMNAYVYCGLLADAKQIFHHTPCK-NVVSWTILISGLAKND 101

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
             V+AI +F EM    F PN    S+V+ A +N   + I   ++ F ++ G F+ +V V 
Sbjct: 102 CFVEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGG-FEGNVFVE 160

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            AL+DM+ K    +  A ++F+ M+E+N V W  +++  +  G   +AI LF  M   G 
Sbjct: 161 TALVDMYSKFGC-MGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGL 219

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           L D +T+  ++ A   +     G  +H + IRTG   D  +  +L+D+Y        VDD
Sbjct: 220 LVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVS---HNCVDD 276

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKAC 398
           + +VF  M   +V +WT ++TG+  SG     A+K F+ M+  Q +  +      +L +C
Sbjct: 277 AHRVFSEMFVKDVAAWTLMLTGF-SSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSC 335

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +        +V+  A+K   A +  VG+++I MYA  G +EDA++ F  + EK++V +N
Sbjct: 336 SHSGALQQGRRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMGEKDVVCWN 395

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+     N     A +L  +++ +G+     TF S+L   S  G + +G QI   ++K+
Sbjct: 396 AMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKT 455

Query: 519 GFE-SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK-HGFAARALE 576
             +  N   Y  +I +  R   ++AA+     M  +      S + G  + HG      E
Sbjct: 456 SHDIPNLQHYACVIDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLGHE 515

Query: 577 IFYKMLADGIKPNGITYIAVLS 598
           I  K+    ++PN   Y  +LS
Sbjct: 516 ISQKIFE--MEPNDAGYYVLLS 535



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 215/404 (53%), Gaps = 12/404 (2%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+  I +GL  +  +  SL++ Y  C   G + D++++F      NV+SWT +I+G 
Sbjct: 41  QQIHAQIITSGLTHNTFLSNSLMNAYVYC---GLLADAKQIFHHTPCKNVVSWTILISGL 97

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            ++     EA+ +F +M  G   PN  T +SVL A  NL    +A+ V+   V+ G   +
Sbjct: 98  AKNDCF-VEAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGN 156

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  +L+ MY++ G M  AR+ FES+ E+N+VS+N +V  Y+ +  SE+A +L + +  
Sbjct: 157 VFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRR 216

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G+    YT  SL+  + S+G +  G  IH  II++G+E++  I  AL+ +Y     V+ 
Sbjct: 217 KGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIKTALMDIYVSHNCVDD 276

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACS 601
           A +VF EM  ++V +WT M+TGF+      RA++ F KML    +K + I  + +LS+CS
Sbjct: 277 AHRVFSEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCS 336

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H+G + +G +   ++  +      +   + ++D+    G+L +A  F   M    DV+ W
Sbjct: 337 HSGALQQG-RRVHALAIKTCFANNIFVGSAVIDMYANCGNLEDAKRFFYGMG-EKDVVCW 394

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQ--DPAAHILLSNLYA 703
              +    ++G    G  A ++ L+      DP     +S LYA
Sbjct: 395 NAMIAGNGMNG---YGTDAIDLFLQMKGSGLDPDESTFVSVLYA 435



 Score =  169 bits (429), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 226/438 (51%), Gaps = 27/438 (6%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +AI     MT     P+  T S +L +        + K VH    R   E N  +  +L+
Sbjct: 105 EAIDVFREMTMGNFKPNAVTISSVLPAFANLGLIRIAKSVHCFWVRGGFEGNVFVETALV 164

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +YSK G +  A ++F+SM ++R++VSW++++S Y + G   +AI +F  M   G   + 
Sbjct: 165 DMYSKFGCMGVARQLFESM-SERNVVSWNAIVSGYSDHGFSEEAIDLFNLMRRKGLLVDF 223

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           Y   ++I A  +   + +G  I+GF+++ GY ++D  +  AL+D++V  +  ++ A++VF
Sbjct: 224 YTIMSLIPASLSVGCLQVGTGIHGFIIRTGY-ENDKHIKTALMDIYVSHNC-VDDAHRVF 281

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELF 299
            +M  K+   WTLM+T  +       AI+ F  M+ +     D   L G++S+CS     
Sbjct: 282 SEMFVKDVAAWTLMLTGFSSGRHWDRAIKHFNKMLGIQNLKLDSIVLMGILSSCSHSGAL 341

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+++H+ AI+T  A ++ VG +++DMYA C   G+++D+++ F  M + +V+ W A+I
Sbjct: 342 QQGRRVHALAIKTCFANNIFVGSAVIDMYANC---GNLEDAKRFFYGMGEKDVVCWNAMI 398

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            G   + G   +A+ LF  M    + P+  TF SVL AC +        Q++ H VK   
Sbjct: 399 AGNGMN-GYGTDAIDLFLQMKGSGLDPDESTFVSVLYACSHAGMVYEGLQIFYHMVKTSH 457

Query: 420 ALDD-----CVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---- 469
            + +     CV    I +  R+G+++ A     ++ F+ +   Y+T++ A   + N    
Sbjct: 458 DIPNLQHYACV----IDILGRAGQLDAAYSFINNMPFQPDFDVYSTLLGACRIHGNIKLG 513

Query: 470 ---SEKAFELLHEIEDTG 484
              S+K FE+  E  D G
Sbjct: 514 HEISQKIFEM--EPNDAG 529



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/227 (27%), Positives = 121/227 (53%), Gaps = 3/227 (1%)

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           ++ P   + AS+L+    L D    +Q++   +  G   +  + NSL++ Y   G + DA
Sbjct: 19  RLCPLAQSHASILR---KLKDLKPLQQIHAQIITSGLTHNTFLSNSLMNAYVYCGLLADA 75

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           ++ F     KN+VS+  ++   AKN    +A ++  E+       +A T +S+L   +++
Sbjct: 76  KQIFHHTPCKNVVSWTILISGLAKNDCFVEAIDVFREMTMGNFKPNAVTISSVLPAFANL 135

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           G I   + +H   ++ GFE N  +  AL+ MYS+   +  A Q+F+ M +RNV+SW +++
Sbjct: 136 GLIRIAKSVHCFWVRGGFEGNVFVETALVDMYSKFGCMGVARQLFESMSERNVVSWNAIV 195

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           +G++ HGF+  A+++F  M   G+  +  T ++++ A    G +  G
Sbjct: 196 SGYSDHGFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVG 242



 Score = 95.9 bits (237), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 73/258 (28%), Positives = 127/258 (49%), Gaps = 6/258 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++AI   +LM +KG   D  T   L+ + +      +G  +H  + R+  E +  I 
Sbjct: 202 GFSEEAIDLFNLMRRKGLLVDFYTIMSLIPASLSVGCLQVGTGIHGFIIRTGYENDKHIK 261

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD-AIHMFVEMLEL- 174
            +L+ +Y     +++A+++F  M  K D+ +W+ M++ + + G+  D AI  F +ML + 
Sbjct: 262 TALMDIYVSHNCVDDAHRVFSEMFVK-DVAAWTLMLTGF-SSGRHWDRAIKHFNKMLGIQ 319

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
               +      ++ +CS++  +  G  ++   +K   F +++ VG A+IDM+     +LE
Sbjct: 320 NLKLDSIVLMGILSSCSHSGALQQGRRVHALAIKTC-FANNIFVGSAVIDMYANCG-NLE 377

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A + F  M EK+ V W  MI      G   DAI LFL M  SG  PD  T   V+ ACS
Sbjct: 378 DAKRFFYGMGEKDVVCWNAMIAGNGMNGYGTDAIDLFLQMKGSGLDPDESTFVSVLYACS 437

Query: 295 ELELFTSGKQLHSWAIRT 312
              +   G Q+    ++T
Sbjct: 438 HAGMVYEGLQIFYHMVKT 455


>gi|356555170|ref|XP_003545909.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 741

 Score =  441 bits (1135), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 230/665 (34%), Positives = 367/665 (55%), Gaps = 39/665 (5%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A ++FD + + +    + +I+  T  G P +AIRL+  +   G  P       V  
Sbjct: 81  DFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTVAK 140

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC      +  K++H  AIR G+  D  +G +L+  Y KC     V+ +R+VFD ++  +
Sbjct: 141 ACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKC---VEGARRVFDDLVVKD 197

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT++ + YV  G   +  + +F +M    V PN  T +S+L AC  L D      ++
Sbjct: 198 VVSWTSMSSCYVNCG-LPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIH 256

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY------- 464
             AV+ G   +  V ++L+S+YAR   ++ AR  F+ +  +++VS+N ++ AY       
Sbjct: 257 GFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYD 316

Query: 465 ----------------------------AKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
                                        +N  +EKA E+L ++++ G   +  T +S L
Sbjct: 317 KGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFL 376

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              S + ++  G+++H  + +     +     AL+ MY++C ++  +  VF  +  ++V+
Sbjct: 377 PACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRKDVV 436

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           +W +MI   A HG     L +F  ML  GIKPN +T+  VLS CSH+ L+ EG + F SM
Sbjct: 437 AWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIFNSM 496

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +H +     HYACMVD+  R+G L EA EFI+ MP+      W   LGACRV+ + EL
Sbjct: 497 GRDHLVEPDANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVEL 556

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            K +A  + E +P +P  ++ L N+  +A  W   +  R  MKER + K  GCSW++  +
Sbjct: 557 AKISANKLFEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGD 616

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           +VH F VG+ ++ ++ +IY  LD+L  K+K  GY PDT++VL ++++E+K + L  HSEK
Sbjct: 617 RVHTFVVGDKNNMESDKIYNFLDELGEKMKSAGYKPDTDYVLQDIDQEEKAESLCSHSEK 676

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +AVAFG+++ +    IRVFKNLR+CGDCH AIKY+S V G  I++RDS RFHH ++G CS
Sbjct: 677 LAVAFGILNLNGQSSIRVFKNLRICGDCHNAIKYVSKVVGVTIIVRDSLRFHHFRNGNCS 736

Query: 857 CNDYW 861
           C D W
Sbjct: 737 CQDLW 741



 Score =  187 bits (474), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 140/536 (26%), Positives = 250/536 (46%), Gaps = 48/536 (8%)

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           GD   A ++F ++  + D  + S++IS++  RG   +AI ++  +   G  P+   F  V
Sbjct: 80  GDFRRAQQLFDNIP-QPDPTTCSTLISAFTTRGLPNEAIRLYASLRARGIKPHNSVFLTV 138

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
            +AC  + + +    ++   ++CG   SD  +G ALI  + K    +E A +VFD +  K
Sbjct: 139 AKACGASGDASRVKEVHDDAIRCGMM-SDAFLGNALIHAYGKCKC-VEGARRVFDDLVVK 196

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V WT M +     G PR  + +F +M  +G  P+  TLS ++ ACSEL+   SG+ +H
Sbjct: 197 DVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIH 256

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS- 365
            +A+R G+  +V V  +LV +YA+C    SV  +R VFD M   +V+SW  ++T Y  + 
Sbjct: 257 GFAVRHGMIENVFVCSALVSLYARCL---SVKQARLVFDLMPHRDVVSWNGVLTAYFTNR 313

Query: 366 ---------------------------------GGRDKEAVKLFSDMIQGQVAPNHFTFA 392
                                             G+ ++AV++   M      PN  T +
Sbjct: 314 EYDKGLALFSQMSSKGVEADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITIS 373

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           S L AC  L    + ++V+ +  +     D     +L+ MYA+ G +  +R  F+ +  K
Sbjct: 374 SFLPACSILESLRMGKEVHCYVFRHWLIGDLTTMTALVYMYAKCGDLNLSRNVFDMICRK 433

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           ++V++NTM+ A A + N  +   L   +  +G+  ++ TF  +LSG S    + +G QI 
Sbjct: 434 DVVAWNTMIIANAMHGNGREVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIF 493

Query: 513 ARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
             + +      ++NH  Y  ++ ++SR   +  A++  + M      S    + G  +  
Sbjct: 494 NSMGRDHLVEPDANH--YACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVY 551

Query: 570 FAARALEIFYKMLADGIKPNGI-TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
                 +I    L + I+PN    Y+++ +    A L SE     R +  E GI +
Sbjct: 552 KNVELAKISANKLFE-IEPNNPGNYVSLFNILVTAKLWSEA-SEARILMKERGITK 605



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 147/555 (26%), Positives = 244/555 (43%), Gaps = 77/555 (13%)

Query: 40  PTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKL 99
           PTT   L +        G   +AI     +  +G  P    +  + K+C  S +    K 
Sbjct: 97  PTTCSTLISAFTTR---GLPNEAIRLYASLRARGIKPHNSVFLTVAKACGASGDASRVKE 153

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           VH    R  +  ++ + N+LI  Y KC  +  A ++F  +  K D+VSW+SM S YVN G
Sbjct: 154 VHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGARRVFDDLVVK-DVVSWTSMSSCYVNCG 212

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
                + +F EM   G  PN    S+++ ACS  +++  G  I+GF ++ G  + +V V 
Sbjct: 213 LPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELKDLKSGRAIHGFAVRHGMIE-NVFVC 271

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR---------------------- 257
            AL+ ++ +  + ++ A  VFD M  ++ V W  ++T                       
Sbjct: 272 SALVSLYAR-CLSVKQARLVFDLMPHRDVVSWNGVLTAYFTNREYDKGLALFSQMSSKGV 330

Query: 258 -------------CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
                        C + G    A+ +   M   GF P++ T+S  + ACS LE    GK+
Sbjct: 331 EADEATWNAVIGGCMENGQTEKAVEMLRKMQNLGFKPNQITISSFLPACSILESLRMGKE 390

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW-TAIITGYV 363
           +H +  R  L  D+    +LV MYAKC   G ++ SR VFD +   +V++W T II   +
Sbjct: 391 VHCYVFRHWLIGDLTTMTALVYMYAKC---GDLNLSRNVFDMICRKDVVAWNTMIIANAM 447

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
              GR  E + LF  M+Q  + PN  TF  VL  C +        Q++ +++ R   ++ 
Sbjct: 448 HGNGR--EVLLLFESMLQSGIKPNSVTFTGVLSGCSHSRLVEEGLQIF-NSMGRDHLVEP 504

Query: 424 CVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKA---FELL 477
              +   ++ +++R+GR+ +A +  + +  E    ++  ++ A     N E A      L
Sbjct: 505 DANHYACMVDVFSRAGRLHEAYEFIQRMPMEPTASAWGALLGACRVYKNVELAKISANKL 564

Query: 478 HEIEDTGVGTSAYTF-----ASLLSGASSIGAIGK---------------GEQIHARII- 516
            EIE    G     F     A L S AS    + K               G+++H  ++ 
Sbjct: 565 FEIEPNNPGNYVSLFNILVTAKLWSEASEARILMKERGITKTPGCSWLQVGDRVHTFVVG 624

Query: 517 -KSGFESNHCIYNAL 530
            K+  ES+  IYN L
Sbjct: 625 DKNNMESDK-IYNFL 638



 Score = 96.3 bits (238), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 61/243 (25%), Positives = 115/243 (47%), Gaps = 2/243 (0%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G  L+      G    A++ F+++ + +  + +T++ A+       +A  L   +   G
Sbjct: 68  LGLRLLKAALNVGDFRRAQQLFDNIPQPDPTTCSTLISAFTTRGLPNEAIRLYASLRARG 127

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +      F ++     + G   + +++H   I+ G  S+  + NALI  Y +C  VE A 
Sbjct: 128 IKPHNSVFLTVAKACGASGDASRVKEVHDDAIRCGMMSDAFLGNALIHAYGKCKCVEGAR 187

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           +VF ++  ++V+SWTSM + +   G     L +F +M  +G+KPN +T  ++L ACS   
Sbjct: 188 RVFDDLVVKDVVSWTSMSSCYVNCGLPRLGLAVFCEMGWNGVKPNSVTLSSILPACSELK 247

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            +  G +        HG+++ +   + +V L  R  S+ +A      MP   DV+ W   
Sbjct: 248 DLKSG-RAIHGFAVRHGMIENVFVCSALVSLYARCLSVKQARLVFDLMP-HRDVVSWNGV 305

Query: 665 LGA 667
           L A
Sbjct: 306 LTA 308


>gi|15237290|ref|NP_200097.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171558|sp|Q9FLX6.1|PP430_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g52850, chloroplastic; Flags: Precursor
 gi|10177099|dbj|BAB10433.1| selenium-binding protein-like [Arabidopsis thaliana]
 gi|332008885|gb|AED96268.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 893

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 260/800 (32%), Positives = 434/800 (54%), Gaps = 26/800 (3%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           A+   + M   G HP+  T+S +++SC   R+   G  VH  + ++  E NSV+ +SL  
Sbjct: 108 ALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSD 167

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           LYSKCG   EA ++F S+ N  D +SW+ MISS V   K  +A+  + EM++ G  PNE+
Sbjct: 168 LYSKCGQFKEACELFSSLQNA-DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEF 226

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            F  ++ A S+   +  G  I+  ++  G    +V +  +L+D + + S  +E A +V +
Sbjct: 227 TFVKLLGA-SSFLGLEFGKTIHSNIIVRG-IPLNVVLKTSLVDFYSQFS-KMEDAVRVLN 283

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
              E++   WT +++   +    ++A+  FL+M   G  P+ FT S ++S CS +     
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           GKQ+HS  I+ G      VG +LVDMY KC+   S  ++ +VF  M+  NV+SWT +I G
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCS--ASEVEASRVFGAMVSPNVVSWTTLILG 401

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            V  G   ++   L  +M++ +V PN  T + VL+AC  L       +++ + ++R    
Sbjct: 402 LVDHGFV-QDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDG 460

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  VGNSL+  YA S +++ A     S+  ++ ++Y ++V  + +    E A  +++ + 
Sbjct: 461 EMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY 520

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             G+     +    +S ++++GA+  G+ +H   +KSGF     + N+L+ MYS+C ++E
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLE 580

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A +VF+E+   +V+SW  +++G A +GF + AL  F +M     +P+ +T++ +LSACS
Sbjct: 581 DAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           +  L   G ++F+ M   + I  ++EHY  +V +LGR+G L EA   + +M L  + +++
Sbjct: 641 NGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIF 700

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           +T L ACR  G+  LG+  A   L   P DPA +ILL++LY  +G  E     R  M E+
Sbjct: 701 KTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEK 760

Query: 722 NLIKEAGCSWIEADNKVHKFHVGE--TSHPKTLEIYAELDQLALKIKEFG--YLPDTNFV 777
            L K+ G S +E   KVH F V E  T   KT  IYAE++ +  +IK FG  Y  + N  
Sbjct: 761 RLSKKLGKSTVEVQGKVHSF-VSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENAS 819

Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
                          HS K AV +G I  S   P+ V KN  +C DCH  +  ++ +  +
Sbjct: 820 F--------------HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDK 865

Query: 838 EIVLRDSNRFHHIKDGKCSC 857
           +I +RD N+ H  K+G+CSC
Sbjct: 866 KITVRDGNQVHIFKNGECSC 885



 Score =  255 bits (652), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 171/625 (27%), Positives = 323/625 (51%), Gaps = 19/625 (3%)

Query: 84  LLKSCIRSRNF------HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L KSCIR  +F       +G  +H  + +  L  N  + N+L+SLY K   +  A K+F 
Sbjct: 23  LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M + R + +W+ MIS++    +   A+ +F EM+  G  PNE+ FS+V+R+C+   +++
Sbjct: 83  EMSH-RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDIS 141

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
            G  ++G ++K G F+ +  VG +L D++ K     + A ++F  +   +T+ WT+MI+ 
Sbjct: 142 YGGRVHGSVIKTG-FEGNSVVGSSLSDLYSKCG-QFKEACELFSSLQNADTISWTMMISS 199

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
                  R+A++ + +M+ +G  P+ FT   ++ A S L L   GK +HS  I  G+ L+
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLN 258

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V +  SLVD Y++ +    ++D+ +V +   + +V  WT++++G+V++  R KEAV  F 
Sbjct: 259 VVLKTSLVDFYSQFS---KMEDAVRVLNSSGEQDVFLWTSVVSGFVRN-LRAKEAVGTFL 314

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           +M    + PN+FT++++L  C  +   +  +Q+++  +K G      VGN+L+ MY +  
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCS 374

Query: 438 RME-DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
             E +A + F ++   N+VS+ T++     +   +  F LL E+    V  +  T + +L
Sbjct: 375 ASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVL 434

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              S +  + +  +IHA +++   +    + N+L+  Y+    V+ A+ V + M+ R+ I
Sbjct: 435 RACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI 494

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           ++TS++T F + G    AL +   M  DGI+ + ++    +SA ++ G +  G KH    
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-KHLHCY 553

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG--DT 674
             + G          +VD+  + GSL +A +    +  + DV+ W   +     +G   +
Sbjct: 554 SVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISS 612

Query: 675 ELGKHAAEMILEQDPQDPAAHILLS 699
            L       + E +P      ILLS
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLS 637



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 225/418 (53%), Gaps = 14/418 (3%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R ++A+ T   M   G  P+  TYS +L  C   R+   GK +HS   +   E ++ + N
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364

Query: 118 SLISLYSKCGDLN-EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +L+ +Y KC     EA+++F +M +  ++VSW+++I   V+ G   D   + +EM++   
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSP-NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN    S V+RACS   +V     I+ +LL+  + D ++ VG +L+D +   S  ++ A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR-RHVDGEMVVGNSLVDAYAS-SRKVDYA 481

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           + V   M  ++ + +T ++TR  +LG    A+ +   M   G   D+ +L G +SA + L
Sbjct: 482 WNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANL 541

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
               +GK LH +++++G +    V  SLVDMY+KC   GS++D++KVF+ +   +V+SW 
Sbjct: 542 GALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKC---GSLEDAKKVFEEIATPDVVSWN 598

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            +++G + S G    A+  F +M   +  P+  TF  +L AC N   +++  + Y   +K
Sbjct: 599 GLVSG-LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMK 656

Query: 417 RGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN 469
           +   ++  V +   L+ +  R+GR+E+A    E++  + N + + T++ A  Y  NL+
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLS 714



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 105/414 (25%), Positives = 185/414 (44%), Gaps = 58/414 (14%)

Query: 50  LIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
           LI  L D G VQ     L  M ++   P++ T S +L++C + R+      +H+ L R  
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
           ++   V+ NSL+  Y+    ++ A  + +SM  +RD ++++S+++ +   GK   A+ + 
Sbjct: 458 VDGEMVVGNSLVDAYASSRKVDYAWNVIRSM-KRRDNITYTSLVTRFNELGKHEMALSVI 516

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
             M   G   ++      I A +N   +  G  ++ + +K G F     V  +L+DM+ K
Sbjct: 517 NYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSG-FSGAASVLNSLVDMYSK 575

Query: 229 -GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
            GS  LE A KVF+++   + V W  +++     G    A+  F +M +    PD  T  
Sbjct: 576 CGS--LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFL 633

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            ++SACS   L             T L L+          Y +          +K+++  
Sbjct: 634 ILLSACSNGRL-------------TDLGLE----------YFQVM--------KKIYN-- 660

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL-LD 403
           ++  V  +  ++ G +   GR +EA  +   M    + PN   F ++L+AC   GNL L 
Sbjct: 661 IEPQVEHYVHLV-GILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACRYRGNLSLG 716

Query: 404 SNVAEQVYTHAVKRGRAL---DDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
            ++A         +G AL   D  +   L  +Y  SG+ E A+K    + EK L
Sbjct: 717 EDMA--------NKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762


>gi|357154074|ref|XP_003576661.1| PREDICTED: pentatricopeptide repeat-containing protein At3g24000,
           mitochondrial-like [Brachypodium distachyon]
          Length = 802

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 221/571 (38%), Positives = 352/571 (61%), Gaps = 6/571 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           LD + SG L P        ++AC++ +     +++H+    +  A D  +  SL+ +Y K
Sbjct: 39  LDHLDSGELAPTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCK 98

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C   GSV ++ KVFD+M + +++SWT++I GY Q+     EA+ L   M++G+  PN FT
Sbjct: 99  C---GSVVEAHKVFDKMRNKDMVSWTSLIAGYAQND-MPAEAIGLLPGMLKGRFKPNGFT 154

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           FAS+LKA G   DS +  Q++  AVK     D  VG++L+ MYAR G+M+ A   F+ L 
Sbjct: 155 FASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARCGKMDMATAVFDKLD 214

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            KN VS+N ++  +A+  + E A  +  E++  G   + +T++S+ S  + IGA+ +G+ 
Sbjct: 215 SKNGVSWNALISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKW 274

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +HA +IKS  +    + N ++ MY++  ++  A +VF+ + ++++++W SM+T FA++G 
Sbjct: 275 VHAHMIKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGL 334

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A+  F +M   GI  N I+++ +L+ACSH GL+ EG KH+  M  E+ +   +EHY 
Sbjct: 335 GKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVKEG-KHYFDMIKEYNLEPEIEHYV 393

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
            +VDLLGR+G L  AL FI  MP+     VW   L ACR+H + ++G+ AA+ + + DP 
Sbjct: 394 TVVDLLGRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMHKNAKVGQFAADHVFQLDPD 453

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           D    +LL N+YAS GHW+  A +RK MK   + KE  CSW+E +N VH F   + +HP+
Sbjct: 454 DSGPPVLLYNIYASTGHWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPR 513

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
             EIY   D++++KI++ GY+PD ++VL  ++E+++   L  HSEKIA+AF LI      
Sbjct: 514 AEEIYKMWDEISMKIRKEGYVPDMDYVLLHVDEQEREANLQYHSEKIALAFALIQMPAGA 573

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
            IR+ KN+R+CGDCH+A KYIS V  REIV+
Sbjct: 574 TIRIMKNIRICGDCHSAFKYISKVFEREIVI 604



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/326 (34%), Positives = 187/326 (57%), Gaps = 9/326 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P    Y   + +C +S+N    + +H+ L  S+   ++ + NSLI LY KCG + EA+K+
Sbjct: 49  PTPRVYHAFITACAQSKNLDDARKIHAHLASSRFAGDAFLDNSLIHLYCKCGSVVEAHKV 108

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M NK D+VSW+S+I+ Y       +AI +   ML+  F PN + F+++++A     +
Sbjct: 109 FDKMRNK-DMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVGAYAD 167

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
             IG  I+   +KC + + DV VG AL+DM+ + G +D+ +A  VFDK+  KN V W  +
Sbjct: 168 SGIGGQIHALAVKCDWHE-DVYVGSALLDMYARCGKMDMATA--VFDKLDSKNGVSWNAL 224

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+   + G    A+ +F +M  +GF    FT S + SA + +     GK +H+  I++  
Sbjct: 225 ISGFARKGDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQ 284

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            L   VG +++DMYAK    GS+ D+RKVF+R+L+ ++++W +++T + Q  G  KEAV 
Sbjct: 285 KLTAFVGNTMLDMYAKS---GSMIDARKVFERVLNKDLVTWNSMLTAFAQY-GLGKEAVS 340

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGN 400
            F +M +  +  N  +F  +L AC +
Sbjct: 341 HFEEMRKSGIYLNQISFLCILTACSH 366



 Score =  183 bits (464), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 199/395 (50%), Gaps = 9/395 (2%)

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
             P    + A I AC+ ++N+     I+  L     F  D  +  +LI ++ K GSV   
Sbjct: 47  LAPTPRVYHAFITACAQSKNLDDARKIHAHL-ASSRFAGDAFLDNSLIHLYCKCGSV--V 103

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A+KVFDKM  K+ V WT +I    Q   P +AI L   M+   F P+ FT + ++ A  
Sbjct: 104 EAHKVFDKMRNKDMVSWTSLIAGYAQNDMPAEAIGLLPGMLKGRFKPNGFTFASLLKAVG 163

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                  G Q+H+ A++     DV VG +L+DMYA+C   G +D +  VFD++   N +S
Sbjct: 164 AYADSGIGGQIHALAVKCDWHEDVYVGSALLDMYARC---GKMDMATAVFDKLDSKNGVS 220

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A+I+G+ + G   + A+ +F++M +      HFT++S+  A   +      + V+ H 
Sbjct: 221 WNALISGFARKGD-GETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHM 279

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           +K  + L   VGN+++ MYA+SG M DARK FE +  K+LV++N+M+ A+A+    ++A 
Sbjct: 280 IKSRQKLTAFVGNTMLDMYAKSGSMIDARKVFERVLNKDLVTWNSMLTAFAQYGLGKEAV 339

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               E+  +G+  +  +F  +L+  S  G + +G+     I +   E     Y  ++ + 
Sbjct: 340 SHFEEMRKSGIYLNQISFLCILTACSHGGLVKEGKHYFDMIKEYNLEPEIEHYVTVVDLL 399

Query: 535 SRCANVEAAFQ-VFKEMEDRNVISWTSMITGFAKH 568
            R   +  A   +FK   +     W +++     H
Sbjct: 400 GRAGLLNYALVFIFKMPMEPTAAVWGALLAACRMH 434



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/271 (24%), Positives = 132/271 (48%), Gaps = 3/271 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +AI  L  M +    P+  T++ LLK+     +  +G  +H+L  +     +  + ++L+
Sbjct: 135 EAIGLLPGMLKGRFKPNGFTFASLLKAVGAYADSGIGGQIHALAVKCDWHEDVYVGSALL 194

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y++CG ++ A  +F  + +K   VSW+++IS +  +G    A+ +F EM   GF    
Sbjct: 195 DMYARCGKMDMATAVFDKLDSKNG-VSWNALISGFARKGDGETALMVFAEMQRNGFEATH 253

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           + +S++  A +    +  G  ++  ++K         VG  ++DM+ K S  +  A KVF
Sbjct: 254 FTYSSIFSALAGIGALEQGKWVHAHMIKSRQ-KLTAFVGNTMLDMYAK-SGSMIDARKVF 311

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           +++  K+ V W  M+T   Q G  ++A+  F +M  SG   ++ +   +++ACS   L  
Sbjct: 312 ERVLNKDLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGIYLNQISFLCILTACSHGGLVK 371

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            GK          L  ++    ++VD+  + 
Sbjct: 372 EGKHYFDMIKEYNLEPEIEHYVTVVDLLGRA 402



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 96/202 (47%), Gaps = 2/202 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  + A+     M + G      TYS +  +         GK VH+ + +S+ +  + + 
Sbjct: 232 GDGETALMVFAEMQRNGFEATHFTYSSIFSALAGIGALEQGKWVHAHMIKSRQKLTAFVG 291

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+++ +Y+K G + +A K+F+ + NK D+V+W+SM++++   G   +A+  F EM + G 
Sbjct: 292 NTMLDMYAKSGSMIDARKVFERVLNK-DLVTWNSMLTAFAQYGLGKEAVSHFEEMRKSGI 350

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             N+  F  ++ ACS+   V  G   +  ++K    + ++     ++D+  +  +   + 
Sbjct: 351 YLNQISFLCILTACSHGGLVKEGKHYFD-MIKEYNLEPEIEHYVTVVDLLGRAGLLNYAL 409

Query: 237 YKVFDKMTEKNTVGWTLMITRC 258
             +F    E     W  ++  C
Sbjct: 410 VFIFKMPMEPTAAVWGALLAAC 431


>gi|359497567|ref|XP_002265980.2| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like, partial [Vitis vinifera]
          Length = 599

 Score =  441 bits (1134), Expect = e-121,   Method: Compositional matrix adjust.
 Identities = 236/636 (37%), Positives = 367/636 (57%), Gaps = 58/636 (9%)

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S DL SA +VF+ MT K TV W  M+   +         R   D I     PD F+ + +
Sbjct: 18  SGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDRIPE---PDIFSYN-I 73

Query: 290 VSACSELELFTSGKQLHSWAIRTGL----ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           + AC           LH+  + +       + V    S   M +  + +G +D +R++F 
Sbjct: 74  MLAC----------YLHNADVESARLFFDQMPVKDTASWNTMISGFSQNGMMDQARELFL 123

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M   N +SW A+I+GYV+SG  D  A +LF      +VAP     A             
Sbjct: 124 VMPVRNSVSWNAMISGYVESGDLDL-AKQLF------EVAPVRSVVA------------- 163

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
                                 ++I+ + + G++E A K FE +  KNLV++N M+  Y 
Sbjct: 164 --------------------WTAMITGFMKFGKIELAEKYFEEMPMKNLVTWNAMIAGYI 203

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +N  +E   +L   + ++G   +  + +S+L G S++ A+  G+Q+H  I KS    N  
Sbjct: 204 ENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNIT 263

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
              +L+SMY +C ++E A+++F  M  ++V++W +MI+G+A+HG   +AL +F KM  +G
Sbjct: 264 AGTSLLSMYCKCGDLEDAWKLFLVMPQKDVVTWNAMISGYAQHGAGEKALYLFDKMRDEG 323

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +KP+ IT++AVLSAC+HAG +  G ++F SM  ++G+  + +HY C+VDLLGR G L EA
Sbjct: 324 MKPDWITFVAVLSACNHAGFVDLGIEYFNSMVRDYGVEAKPDHYTCVVDLLGRGGKLVEA 383

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
           ++ I+ MP      ++ T LGACR+H + EL + AA+ +L  DP+  A ++ L+N+YA+ 
Sbjct: 384 VDLIKKMPFKPHSAIFGTLLGACRIHKNLELAEFAAKNLLNLDPESAAGYVQLANVYAAM 443

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
             W++VA +R+ MK+  +IK  G SWIE  + VH+F  G+  HP+   I+ +L++L  K+
Sbjct: 444 NRWDHVAMVRRSMKDNKVIKTPGYSWIEVKSVVHEFRSGDRIHPELAFIHEKLNELERKM 503

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           +  GY+PD  + LH++ EEQK Q L +HSEK+A+A+GLI      PIRVFKNLRVCGDCH
Sbjct: 504 RLAGYVPDLEYALHDVGEEQKKQILLRHSEKLAIAYGLIRMPLGTPIRVFKNLRVCGDCH 563

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +A KYIS + GR I++RD+ RFHH + G+CSC DYW
Sbjct: 564 SATKYISAIEGRVIIVRDTTRFHHFRQGECSCGDYW 599



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 168/354 (47%), Gaps = 25/354 (7%)

Query: 47  SNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT 105
           SNR+I  H+  G +  A+   + MT K       T++ +L      R     K+   L  
Sbjct: 8   SNRVITNHIRSGDLNSALRVFESMTVKTT----VTWNSMLAGYSNRRG--KIKVARQLFD 61

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           R   EP+    N +++ Y    D+  A   F  M  K D  SW++MIS +   G    A 
Sbjct: 62  RIP-EPDIFSYNIMLACYLHNADVESARLFFDQMPVK-DTASWNTMISGFSQNGMMDQAR 119

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F+ M       N   ++A+I     + ++ +   ++            V    A+I  
Sbjct: 120 ELFLVMP----VRNSVSWNAMISGYVESGDLDLAKQLFEVAPV-----RSVVAWTAMITG 170

Query: 226 FVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           F+K G ++L  A K F++M  KN V W  MI    +     + ++LF  M+ SGF P+  
Sbjct: 171 FMKFGKIEL--AEKYFEEMPMKNLVTWNAMIAGYIENCQAENGLKLFKRMVESGFRPNPS 228

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           +LS V+  CS L     GKQ+H    ++ ++ ++  G SL+ MY KC   G ++D+ K+F
Sbjct: 229 SLSSVLLGCSNLSALKLGKQVHQLICKSPVSWNITAGTSLLSMYCKC---GDLEDAWKLF 285

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             M   +V++W A+I+GY Q G  +K A+ LF  M    + P+  TF +VL AC
Sbjct: 286 LVMPQKDVVTWNAMISGYAQHGAGEK-ALYLFDKMRDEGMKPDWITFVAVLSAC 338



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 63/282 (22%), Positives = 118/282 (41%), Gaps = 53/282 (18%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N +I+ + RSG +  A + FES+  K  V++N+M+  Y+                     
Sbjct: 9   NRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRR------------------ 50

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
                           G I    Q+  RI +    S    YN +++ Y   A+VE+A   
Sbjct: 51  ----------------GKIKVARQLFDRIPEPDIFS----YNIMLACYLHNADVESARLF 90

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F +M  ++  SW +MI+GF+++G   +A E+F  M       N +++ A++S    +G +
Sbjct: 91  FDQMPVKDTASWNTMISGFSQNGMMDQARELFLVMPVR----NSVSWNAMISGYVESGDL 146

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
               + F     E   V+ +  +  M+    + G +  A ++   MP+  +++ W   + 
Sbjct: 147 DLAKQLF-----EVAPVRSVVAWTAMITGFMKFGKIELAEKYFEEMPMK-NLVTWNAMIA 200

Query: 667 A----CRVHGDTELGKHAAEMILEQDPQDPAAHIL-LSNLYA 703
                C+     +L K   E     +P   ++ +L  SNL A
Sbjct: 201 GYIENCQAENGLKLFKRMVESGFRPNPSSLSSVLLGCSNLSA 242



 Score = 45.1 bits (105), Expect = 0.15,   Method: Compositional matrix adjust.
 Identities = 36/163 (22%), Positives = 74/163 (45%), Gaps = 11/163 (6%)

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA-KHGFAARALEIFYK 580
           SN    N +I+ + R  ++ +A +VF+ M  +  ++W SM+ G++ + G    A ++F +
Sbjct: 3   SNVISSNRVITNHIRSGDLNSALRVFESMTVKTTVTWNSMLAGYSNRRGKIKVARQLFDR 62

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           +     +P+  +Y  +L+   H   +       R  +D+   V+    +  M+    ++G
Sbjct: 63  I----PEPDIFSYNIMLACYLHNADVESA----RLFFDQMP-VKDTASWNTMISGFSQNG 113

Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
            + +A E    MP+   V  W   +      GD +L K   E+
Sbjct: 114 MMDQARELFLVMPVRNSV-SWNAMISGYVESGDLDLAKQLFEV 155


>gi|224067848|ref|XP_002302563.1| predicted protein [Populus trichocarpa]
 gi|222844289|gb|EEE81836.1| predicted protein [Populus trichocarpa]
          Length = 514

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 213/509 (41%), Positives = 328/509 (64%), Gaps = 1/509 (0%)

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW ++I G V+ G  +++A+  F  M    +  + +T  SVL +  ++     A  V+ 
Sbjct: 7   VSWNSLILGCVREG-FEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVHC 65

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             +K G      V N+LI MYA+ G+++ A   F  + +K++VS+ ++V  Y+ N + E+
Sbjct: 66  LIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGSYEE 125

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A +L  ++  +GV       AS+LS  + +  +  G+QIHA ++KSG ES+  + N+L++
Sbjct: 126 AIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNSLVT 185

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY++C ++  A + F  M  R+VISWT++I G+A++G    +L+ + +M+A G KP+ IT
Sbjct: 186 MYAKCGSIVDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATGTKPDYIT 245

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +I +L ACSH GL+  G  +F +M   +GI    EHYACM+DLLGRSG L EA   +  M
Sbjct: 246 FIGLLFACSHNGLLGSGRAYFEAMDKVYGIKPGPEHYACMIDLLGRSGKLAEAKGLLNQM 305

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
            ++ D +VW+  L ACRVH + ELG+ AA+ + E +P +   +++LSN+Y++AG WE  A
Sbjct: 306 VVAPDAVVWKALLAACRVHKELELGEMAAKNLFELEPMNSMPYVMLSNMYSAAGKWEDAA 365

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            IR+ M+ R + KE G SWIE ++KV  F   + +HP   EIY+++D++ + IKE GY+P
Sbjct: 366 RIRRLMRSRGICKEPGYSWIETNSKVSTFMSEDRNHPLRNEIYSKIDEIIMLIKEAGYVP 425

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D +F LH+ ++E K   L  HSEK+AVAFGL++  +  PIR+FKNLRVCGDCHTA+KY S
Sbjct: 426 DMSFALHDTDDEVKELGLAYHSEKLAVAFGLLTVPQGAPIRIFKNLRVCGDCHTAMKYTS 485

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            V  R I+LRDSN FHH  +G+CSC DYW
Sbjct: 486 KVYARHIILRDSNCFHHFTEGRCSCGDYW 514



 Score =  166 bits (419), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 106/307 (34%), Positives = 172/307 (56%), Gaps = 19/307 (6%)

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           D VSW+S+I   V  G + DA+  F +M       +EY   +V+ + ++ + +     ++
Sbjct: 5   DEVSWNSLILGCVREGFEEDALSFFQKMRSRDMKIDEYTLPSVLNSFASMKVMQNAISVH 64

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             ++K G F++   V  ALIDM+ K    L+ A  VF KM +K+ V WT ++T  +  G 
Sbjct: 65  CLIIKTG-FEAYKLVNNALIDMYAKQG-KLDCAIMVFSKMVDKDVVSWTSLVTGYSHNGS 122

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +AI+LF  M +SG  PD+  ++ V+SAC+EL +   G+Q+H+  +++GL   + V  S
Sbjct: 123 YEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLSVDNS 182

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           LV MYAKC   GS+ D+ + FD M   +V+SWTA+I GY Q+ GR K +++ +  MI   
Sbjct: 183 LVTMYAKC---GSIVDANRAFDNMPTRDVISWTALIVGYAQN-GRGKHSLQFYDQMIATG 238

Query: 384 VAPNHFTFASVLKACGN--LLDSNVA-----EQVYTHAVKRGRALDDCVGNSLISMYARS 436
             P++ TF  +L AC +  LL S  A     ++VY   +K G     C    +I +  RS
Sbjct: 239 TKPDYITFIGLLFACSHNGLLGSGRAYFEAMDKVY--GIKPGPEHYAC----MIDLLGRS 292

Query: 437 GRMEDAR 443
           G++ +A+
Sbjct: 293 GKLAEAK 299



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 89/346 (25%), Positives = 160/346 (46%), Gaps = 43/346 (12%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           VH L+ ++  E   ++ N+LI +Y+K G L+ A  +F  M +K D+VSW+S+++ Y + G
Sbjct: 63  VHCLIIKTGFEAYKLVNNALIDMYAKQGKLDCAIMVFSKMVDK-DVVSWTSLVTGYSHNG 121

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +AI +F +M   G  P++   ++V+ AC+    +  G  I+  L+K G  +S + V 
Sbjct: 122 SYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSG-LESSLSVD 180

Query: 220 CALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
            +L+ M+ K GS+    A + FD M  ++ + WT +I    Q G  + +++ +  MI +G
Sbjct: 181 NSLVTMYAKCGSI--VDANRAFDNMPTRDVISWTALIVGYAQNGRGKHSLQFYDQMIATG 238

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD  T  G++ ACS   L  SG+           A+D   G      +  C +D    
Sbjct: 239 TKPDYITFIGLLFACSHNGLLGSGRAYFE-------AMDKVYGIKPGPEHYACMID---- 287

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
                                   +   G+  EA  L + M+   VAP+   + ++L AC
Sbjct: 288 -----------------------LLGRSGKLAEAKGLLNQMV---VAPDAVVWKALLAAC 321

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
               +  + E    +  +    ++      L +MY+ +G+ EDA +
Sbjct: 322 RVHKELELGEMAAKNLFEL-EPMNSMPYVMLSNMYSAAGKWEDAAR 366



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 40/139 (28%), Positives = 77/139 (55%), Gaps = 1/139 (0%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G  ++AI     M   G +PD    + +L +C        G+ +H+ L +S LE +  
Sbjct: 119 HNGSYEEAIKLFCKMRISGVYPDQIAVASVLSACAELTVMDFGQQIHATLVKSGLESSLS 178

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSL+++Y+KCG + +AN+ F +M   RD++SW+++I  Y   G+   ++  + +M+  
Sbjct: 179 VDNSLVTMYAKCGSIVDANRAFDNMPT-RDVISWTALIVGYAQNGRGKHSLQFYDQMIAT 237

Query: 175 GFCPNEYCFSAVIRACSNT 193
           G  P+   F  ++ ACS+ 
Sbjct: 238 GTKPDYITFIGLLFACSHN 256


>gi|449437940|ref|XP_004136748.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g52630-like [Cucumis sativus]
          Length = 598

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/560 (41%), Positives = 348/560 (62%), Gaps = 5/560 (0%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G QLH+  ++ GL     V  +L+++Y+K  +      S +VFD     +  +W+++I+ 
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLF---SLQVFDETPKKSSTTWSSVISA 100

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q+      A++ F  M+   V P+   + S  KACG L  S+V + V+  AVK G   
Sbjct: 101 FAQNEA-PLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYC 159

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  VG+SL+ MYA+ G + DAR  F+ + E+N+VS++ M+  YA+  +  +A  L  +  
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQAL 219

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              V  + +TF+S++   SS   +  G+ IH   +K  F+S+  + +ALIS+YS+C  +E
Sbjct: 220 IEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIE 279

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A+QVF E+  RN+  W SM+   A+H    R   +F +M   G+KPN I++++VL ACS
Sbjct: 280 GAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACS 339

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGL+ +G ++F  M D +GI    EHYA +VDLLGR+G L EA+  I+ MP+     VW
Sbjct: 340 HAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              L  CR+H DTE+    A+ ILE D      H+LLSN YA+AG +E  A +RK +++R
Sbjct: 399 GALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + KE G SW+E  NKVH F  G+ SH K +EIY +L++L  ++++ GY+ DT+FVL  +
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           + E+K + +  HSE++A+AFGLI+    +PIRV KNLRVCGDCH AIK++S   GR +++
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFH  +DGKCSC DYW
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598



 Score =  178 bits (452), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 207/402 (51%), Gaps = 8/402 (1%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI+++ K  + L S  +VFD+  +K++  W+ +I+   Q   P  A++ F  M+  G  P
Sbjct: 66  LINLYSKTQLPLFS-LQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRP 124

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D         AC  L     GK +H  A++TG   DV VG SLVDMYAKC   G + D+R
Sbjct: 125 DDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKC---GEIGDAR 181

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            +FD M + NV+SW+ +I GY Q      EA+ LF   +   V  N FTF+SV++ C + 
Sbjct: 182 HLFDEMPERNVVSWSGMIYGYAQLDD-GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
               + + ++   +K        VG++LIS+Y++ G +E A + F+ +  +NL  +N+M+
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
            A A++ ++++ F L  E+ + G+  +  +F S+L   S  G + KG +  + +   G E
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYK 580
                Y +L+ +  R   ++ A  V K+M  R   S W +++TG   H     A  +  +
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           +L      +G+ ++ + +A + AG   E  +  R M  + G+
Sbjct: 421 ILEMDSSSSGL-HVLLSNAYAAAGRYEEAAR-MRKMLRDRGV 460



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 175/359 (48%), Gaps = 7/359 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL S  RSR+   G  +H+ + +  L+   ++ ++LI+LYSK      + ++F     K+
Sbjct: 31  LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDET-PKK 89

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
              +WSS+IS++      + A+  F  ML  G  P+++ + +  +AC       +G  ++
Sbjct: 90  SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
              +K GY+  DV VG +L+DM+ K   ++  A  +FD+M E+N V W+ MI    QL  
Sbjct: 150 CLAVKTGYY-CDVFVGSSLVDMYAKCG-EIGDARHLFDEMPERNVVSWSGMIYGYAQLDD 207

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ LF   ++     + FT S V+  CS       GK +H   ++        VG +
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSA 267

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+ +Y+KC   G ++ + +VFD +   N+  W +++    Q     +    LF +M    
Sbjct: 268 LISLYSKC---GVIEGAYQVFDEIPTRNLGLWNSMLIACAQH-AHTQRVFGLFEEMGNVG 323

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           + PN  +F SVL AC +        + ++     G   +     SL+ +  R+G++++A
Sbjct: 324 MKPNFISFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEA 382



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 148/294 (50%), Gaps = 7/294 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD   Y    K+C   R   +GK VH L  ++    +  + +SL+ +Y+KCG+
Sbjct: 117 MLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGE 176

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A  +F  M  +R++VSWS MI  Y      V+A+ +F + L      N++ FS+VIR
Sbjct: 177 IGDARHLFDEM-PERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIR 235

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            CS++  + +G +I+G  LK   FDS   VG ALI ++ K  V +E AY+VFD++  +N 
Sbjct: 236 VCSSSTFLELGKLIHGLCLKMS-FDSSSFVGSALISLYSKCGV-IEGAYQVFDEIPTRNL 293

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
             W  M+  C Q    +    LF +M   G  P+  +   V+ ACS   L   G++  S 
Sbjct: 294 GLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFISFLSVLYACSHAGLVEKGREYFSL 353

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS-WTAIITG 361
               G+  +     SLVD+  +    G + ++  V  +M      S W A++TG
Sbjct: 354 MRDYGIEPETEHYASLVDLLGRA---GKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 6/160 (3%)

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           ++ +G Q+HA I+K G ++   + + LI++YS+      + QVF E   ++  +W+S+I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI--SEGWKHFRSMYDEHG 621
            FA++     AL+ F +ML DG++P+   Y +   AC   G +  S+  K    +  + G
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC---GFLRRSDVGKSVHCLAVKTG 156

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
               +   + +VD+  + G + +A      MP   +V+ W
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSW 195


>gi|356502930|ref|XP_003520267.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 780

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/660 (36%), Positives = 362/660 (54%), Gaps = 38/660 (5%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACS 294
           A  VF+++ + N   W  +I        P  +  +FL M+ S    P++FT   +  A S
Sbjct: 125 AKNVFNQIPQPNLYCWNTLIRGYASSSDPTQSFLIFLHMLHSCSEFPNKFTFPFLFKAAS 184

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
            L++   G  LH   I+  L+ D+ +  SL++ Y      G+ D + +VF  M   +V+S
Sbjct: 185 RLKVLHLGSVLHGMVIKASLSSDLFILNSLINFYGS---SGAPDLAHRVFTNMPGKDVVS 241

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           W A+I  +   G  DK A+ LF +M    V PN  T  SVL AC   +D      + ++ 
Sbjct: 242 WNAMINAFALGGLPDK-ALLLFQEMEMKDVKPNVITMVSVLSACAKKIDLEFGRWICSYI 300

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD------------ 462
              G      + N+++ MY + G + DA+  F  + EK++VS+ TM+D            
Sbjct: 301 ENNGFTEHLILNNAMLDMYVKCGCINDAKDLFNKMSEKDIVSWTTMLDGHAKLGNYDEAH 360

Query: 463 -------------------AYAKNLNSEKAFELLHEIE-DTGVGTSAYTFASLLSGASSI 502
                              AY +N     A  L HE++          T    L  ++ +
Sbjct: 361 CIFDAMPHKWTAAWNALISAYEQNGKPRVALSLFHEMQLSKDAKPDEVTLICALCASAQL 420

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
           GAI  G  IH  I K     N  +  +L+ MY++C N+  A +VF  +E ++V  W++MI
Sbjct: 421 GAIDFGHWIHVYIKKHDINLNCHLATSLLDMYAKCGNLNKAMEVFHAVERKDVYVWSAMI 480

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
              A +G    AL++F  ML   IKPN +T+  +L AC+HAGL++EG + F  M   +GI
Sbjct: 481 GALAMYGQGKAALDLFSSMLEAYIKPNAVTFTNILCACNHAGLVNEGEQLFEQMEPLYGI 540

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
           V +++HY C+VD+ GR+G L +A  FI  MP+     VW   LGAC  HG+ EL + A +
Sbjct: 541 VPQIQHYVCVVDIFGRAGLLEKAASFIEKMPIPPTAAVWGALLGACSRHGNVELAELAYQ 600

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            +LE +P +  A +LLSN+YA AG WE V+N+RK M++ ++ KE  CS I+ +  VH+F 
Sbjct: 601 NLLELEPCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSIDVNGIVHEFL 660

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV-QYLFQHSEKIAVAF 801
           VG+ SHP + +IY++LD+++ K K  GY PD + +L   EE+  + Q L  HSEK+A+AF
Sbjct: 661 VGDNSHPFSQKIYSKLDEISEKFKPIGYKPDMSNLLQLSEEDNLMEQSLNVHSEKLAIAF 720

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GLIST+ S+PIR+ KN+R+CGDCH   K +S +  R+I+LRD  RFHH + GKCSC DYW
Sbjct: 721 GLISTASSQPIRIVKNIRICGDCHAFAKLVSQLYDRDILLRDRYRFHHFRGGKCSCLDYW 780



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 139/538 (25%), Positives = 242/538 (44%), Gaps = 75/538 (13%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
            Q  +  L ++      P+  T+  L K+  R +  HLG ++H ++ ++ L  +  ILNS
Sbjct: 154 TQSFLIFLHMLHSCSEFPNKFTFPFLFKAASRLKVLHLGSVLHGMVIKASLSSDLFILNS 213

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           LI+ Y   G  + A+++F +M  K D+VSW++MI+++   G    A+ +F EM      P
Sbjct: 214 LINFYGSSGAPDLAHRVFTNMPGK-DVVSWNAMINAFALGGLPDKALLLFQEMEMKDVKP 272

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N     +V+ AC+   ++  G  I  ++   G F   + +  A++DM+VK    +  A  
Sbjct: 273 NVITMVSVLSACAKKIDLEFGRWICSYIENNG-FTEHLILNNAMLDMYVKCGC-INDAKD 330

Query: 239 VFDKMTEKNTVGWTLM-------------------------------ITRCTQLGCPRDA 267
           +F+KM+EK+ V WT M                               I+   Q G PR A
Sbjct: 331 LFNKMSEKDIVSWTTMLDGHAKLGNYDEAHCIFDAMPHKWTAAWNALISAYEQNGKPRVA 390

Query: 268 IRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           + LF +M LS    PD  TL   + A ++L     G  +H +  +  + L+  +  SL+D
Sbjct: 391 LSLFHEMQLSKDAKPDEVTLICALCASAQLGAIDFGHWIHVYIKKHDINLNCHLATSLLD 450

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MYAKC   G+++ + +VF  +   +V  W+A+I G +   G+ K A+ LFS M++  + P
Sbjct: 451 MYAKC---GNLNKAMEVFHAVERKDVYVWSAMI-GALAMYGQGKAALDLFSSMLEAYIKP 506

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           N  TF ++L AC +    N  EQ++                 +  +Y    +++      
Sbjct: 507 NAVTFTNILCACNHAGLVNEGEQLFEQ---------------MEPLYGIVPQIQH----- 546

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
                     Y  +VD + +    EKA      IE   +  +A  + +LL   S  G + 
Sbjct: 547 ----------YVCVVDIFGRAGLLEKAASF---IEKMPIPPTAAVWGALLGACSRHGNVE 593

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS--WTSMI 562
             E  +  +++     NH  +  L ++Y++  + E    + K M D +V    W S I
Sbjct: 594 LAELAYQNLLELE-PCNHGAFVLLSNIYAKAGDWEKVSNLRKLMRDSDVKKEPWCSSI 650


>gi|116792842|gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score =  441 bits (1133), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 198/370 (53%), Positives = 266/370 (71%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            A +L   +S+ A+ +G+Q+HA IIK GFE +  + N L+ MY +C  +E A +VF ++ 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           + +V SW +MI+G A+HG    A+ +F +ML  G+KPN IT++ VLS CSHAGL+ EG  
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           +F SM  +HGI  + EHY+CMVDL GR+G L EAL FI  MP+  +  VW + LGACRVH
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
           G+ EL + A E ++E  P++P  ++LLSN+YA+AG W+    +RK MK+R++ KE GCSW
Sbjct: 181 GNIELAERAVEQLIELTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSVKKEPGCSW 240

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           IE  NKVH F VG++SHP+  EIY  L+ L L++K  GY+P+TNFVLH++EEEQK   L 
Sbjct: 241 IEVQNKVHPFIVGDSSHPQIEEIYETLETLTLQMKAAGYIPNTNFVLHDVEEEQKEWILG 300

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSEK+A+AFG+IST     IRV KNLRVCGDCHTA K+IS +  REIVLRD++RFHH K
Sbjct: 301 HHSEKLAIAFGIISTPPGTTIRVVKNLRVCGDCHTATKFISRIVSREIVLRDTHRFHHFK 360

Query: 852 DGKCSCNDYW 861
           DG+CSC DYW
Sbjct: 361 DGQCSCGDYW 370



 Score =  109 bits (273), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/275 (29%), Positives = 133/275 (48%), Gaps = 48/275 (17%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           ++G++ AC+ +     GKQ+H+  I+ G  LDV V   LVDMY KC   G ++D+++VF 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKC---GRIEDAQEVFS 57

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           ++L+ +V SW A+I+G  Q G   KEAV LF  M+Q  V PN  TF  VL  C       
Sbjct: 58  KLLEPDVASWNAMISGLAQHGC-GKEAVLLFEQMLQTGVKPNQITFVVVLSGC------- 109

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNTM 460
                 +HA                      G +++ R  F+S+   + +S     Y+ M
Sbjct: 110 ------SHA----------------------GLVDEGRNYFDSMTRDHGISPKAEHYSCM 141

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           VD + +    ++A   ++++    V  +A  + SLL      G I   E+   ++I+   
Sbjct: 142 VDLFGRAGCLDEALNFINQMP---VEPNASVWGSLLGACRVHGNIELAERAVEQLIELTP 198

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           E N   Y  L ++Y+     + A +V K M+DR+V
Sbjct: 199 E-NPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSV 232



 Score = 94.7 bits (234), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 62/233 (26%), Positives = 111/233 (47%), Gaps = 9/233 (3%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
            A +L+AC ++      +QV+   +K G  LD  V N L+ MY + GR+EDA++ F  L 
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKLL 60

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           E ++ S+N M+   A++   ++A  L  ++  TGV  +  TF  +LSG S  G + +G  
Sbjct: 61  EPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRN 120

Query: 511 IHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
               + +  G       Y+ ++ ++ R   ++ A     +M  + N   W S++     H
Sbjct: 121 YFDSMTRDHGISPKAEHYSCMVDLFGRAGCLDEALNFINQMPVEPNASVWGSLLGACRVH 180

Query: 569 G---FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           G    A RA+E   ++  +    N  TY+ + +  + AG   +  K  + M D
Sbjct: 181 GNIELAERAVEQLIELTPE----NPGTYVLLSNIYAAAGRWDDAGKVRKMMKD 229



 Score = 78.2 bits (191), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 125/279 (44%), Gaps = 54/279 (19%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
            + ++RAC++   +  G  ++  ++K G F+ DV V   L+DM+ K    +E A +VF K
Sbjct: 1   MAGILRACASVAALEQGKQVHADIIKIG-FELDVSVSNGLVDMYGKCG-RIEDAQEVFSK 58

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           + E +   W  MI+   Q GC ++A+ LF  M+ +G  P++ T   V+S CS        
Sbjct: 59  LLEPDVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHA------ 112

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMS----WTA 357
                                           G VD+ R  FD M  DH +      ++ 
Sbjct: 113 --------------------------------GLVDEGRNYFDSMTRDHGISPKAEHYSC 140

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           ++  + ++G  D EA+   + M    V PN   + S+L AC    +  +AE+     ++ 
Sbjct: 141 MVDLFGRAGCLD-EALNFINQM---PVEPNASVWGSLLGACRVHGNIELAERAVEQLIE- 195

Query: 418 GRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKNL 454
                +  G  ++  ++YA +GR +DA K  + + ++++
Sbjct: 196 --LTPENPGTYVLLSNIYAAAGRWDDAGKVRKMMKDRSV 232



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 44/176 (25%), Positives = 83/176 (47%), Gaps = 3/176 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L++C        GK VH+ + +   E +  + N L+ +Y KCG + +A ++F  +  + 
Sbjct: 4   ILRACASVAALEQGKQVHADIIKIGFELDVSVSNGLVDMYGKCGRIEDAQEVFSKL-LEP 62

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           D+ SW++MIS     G   +A+ +F +ML+ G  PN+  F  V+  CS+   V  G   +
Sbjct: 63  DVASWNAMISGLAQHGCGKEAVLLFEQMLQTGVKPNQITFVVVLSGCSHAGLVDEGRNYF 122

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
             + +             ++D+F +    L+ A    ++M  E N   W  ++  C
Sbjct: 123 DSMTRDHGISPKAEHYSCMVDLFGRAGC-LDEALNFINQMPVEPNASVWGSLLGAC 177


>gi|147812499|emb|CAN61868.1| hypothetical protein VITISV_002466 [Vitis vinifera]
          Length = 440

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 203/439 (46%), Positives = 298/439 (67%)

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
           + V N+L+ MYA+ G  + A   FE + +K+++S+ ++V     N + E+A  L  E+  
Sbjct: 2   ELVNNALVDMYAKXGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRI 61

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G+       A++LS  + +  +  G+Q+HA  +KSG  S+  + N+L+SMY++C  +E 
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCIED 121

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A +VF  ME ++VI+WT++I G+A++G    +L  +  M+A G+KP+ IT+I +L ACSH
Sbjct: 122 ANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFACSH 181

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGL+  G  +F+SM + +GI    EHYACM+DLLGRSG L EA E +  M +  D  VW+
Sbjct: 182 AGLVEHGRSYFQSMEEVYGIKPGPEHYACMIDLLGRSGKLMEAKELLNQMAVQPDATVWK 241

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             L ACRVHG+ ELG+ AA  + E +P++   ++LLSNLY++AG WE  A  R+ MK R 
Sbjct: 242 ALLAACRVHGNVELGERAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRG 301

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           + KE GCSWIE  +KVH+F   + SHP+T EIY+++D++ + IKE GY+PD NF LH+++
Sbjct: 302 VSKEPGCSWIEMSSKVHRFMSEDRSHPRTAEIYSKVDEIMILIKEAGYVPDMNFALHDMD 361

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE K   L  HSEK+AVAFGL++     PIR+FKNLR+CGDCHTA+KY+S V  R ++LR
Sbjct: 362 EEGKELGLAYHSEKLAVAFGLLTMPPGAPIRIFKNLRICGDCHTAMKYVSGVFHRHVILR 421

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           DSN FHH ++G CSC+DYW
Sbjct: 422 DSNCFHHFREGACSCSDYW 440



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 112/357 (31%), Positives = 176/357 (49%), Gaps = 60/357 (16%)

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V  AL+DM+ K     + A+ VF+KMT+K+ + WT ++T C   G   +A+RLF +M + 
Sbjct: 4   VNNALVDMYAKXGY-FDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYEEALRLFCEMRIM 62

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           G  PD+  ++ V+SAC+EL +   GKQ+H+  +++GL   + V  SLV MYAKC   G +
Sbjct: 63  GIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKC---GCI 119

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           +D+ KVFD M   +V++WTA+I GY Q+ GR +E++  ++BMI   V P+  TF  +L A
Sbjct: 120 EDANKVFDSMEIQDVITWTALIVGYAQN-GRGRESLNFYNBMIASGVKPDFITFIGLLFA 178

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS- 456
           C             +HA                      G +E  R  F+S+ E   +  
Sbjct: 179 C-------------SHA----------------------GLVEHGRSYFQSMEEVYGIKP 203

Query: 457 ----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
               Y  M+D   ++    +A ELL+++    V   A  + +LL+     G +  GE   
Sbjct: 204 GPEHYACMIDLLGRSGKLMEAKELLNQM---AVQPDATVWKALLAACRVHGNVELGE--- 257

Query: 513 ARIIKSGFE---SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV-----ISWTSM 561
            R   + FE    N   Y  L ++YS     E A +  + M+ R V      SW  M
Sbjct: 258 -RAANNLFELEPKNAVPYVLLSNLYSAAGKWEEAAKTRRLMKLRGVSKEPGCSWIEM 313



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 154/309 (49%), Gaps = 27/309 (8%)

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  +LVDMYAK    G  D +  VF++M D +V+SWT+++TG V +G  + EA++LF +M
Sbjct: 4   VNNALVDMYAK---XGYFDYAFDVFEKMTDKDVISWTSLVTGCVHNGSYE-EALRLFCEM 59

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               + P+    A+VL AC  L      +QV+ + +K G      V NSL+SMYA+ G +
Sbjct: 60  RIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSLSVDNSLVSMYAKCGCI 119

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           EDA K F+S+  ++++++  ++  YA+N    ++    +++  +GV     TF  LL   
Sbjct: 120 EDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFAC 179

Query: 500 SSIGAIGKG-------EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           S  G +  G       E+++   IK G E   C    +I +  R   +  A ++  +M  
Sbjct: 180 SHAGLVEHGRSYFQSMEEVYG--IKPGPEHYAC----MIDLLGRSGKLMEAKELLNQMAV 233

Query: 553 R-NVISWTSMITGFAKHG---FAARALEIFYKMLADGIKP-NGITYIAVLSACSHAGLIS 607
           + +   W +++     HG      RA    +++     +P N + Y+ + +  S AG   
Sbjct: 234 QPDATVWKALLAACRVHGNVELGERAANNLFEL-----EPKNAVPYVLLSNLYSAAGKWE 288

Query: 608 EGWKHFRSM 616
           E  K  R M
Sbjct: 289 EAAKTRRLM 297



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 72/266 (27%), Positives = 137/266 (51%), Gaps = 21/266 (7%)

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           ++ N+L+ +Y+K G  + A  +F+ M +K D++SW+S+++  V+ G   +A+ +F EM  
Sbjct: 3   LVNNALVDMYAKXGYFDYAFDVFEKMTDK-DVISWTSLVTGCVHNGSYEEALRLFCEMRI 61

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           +G  P++   +AV+ AC+    +  G  ++   LK G   S + V  +L+ M+ K    +
Sbjct: 62  MGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSG-LGSSLSVDNSLVSMYAKCGC-I 119

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A KVFD M  ++ + WT +I    Q G  R+++  + BMI SG  PD  T  G++ AC
Sbjct: 120 EDANKVFDSMEIQDVITWTALIVGYAQNGRGRESLNFYNBMIASGVKPDFITFIGLLFAC 179

Query: 294 SELELFTSGKQLHS-----WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM- 347
           S   L   G+         + I+ G     C    ++D+  +    G + +++++ ++M 
Sbjct: 180 SHAGLVEHGRSYFQSMEEVYGIKPGPEHYAC----MIDLLGR---SGKLMEAKELLNQMA 232

Query: 348 LDHNVMSWTAIIT-----GYVQSGGR 368
           +  +   W A++      G V+ G R
Sbjct: 233 VQPDATVWKALLAACRVHGNVELGER 258



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 81/146 (55%), Gaps = 1/146 (0%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +++G  ++A+     M   G HPD    + +L +C        GK VH+   +S L  + 
Sbjct: 44  VHNGSYEEALRLFCEMRIMGIHPDQIVIAAVLSACAELTVLEFGKQVHANFLKSGLGSSL 103

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + NSL+S+Y+KCG + +ANK+F SM   +D+++W+++I  Y   G+  ++++ + +M+ 
Sbjct: 104 SVDNSLVSMYAKCGCIEDANKVFDSM-EIQDVITWTALIVGYAQNGRGRESLNFYNBMIA 162

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIG 199
            G  P+   F  ++ ACS+   V  G
Sbjct: 163 SGVKPDFITFIGLLFACSHAGLVEHG 188


>gi|226505202|ref|NP_001141725.1| uncharacterized protein LOC100273856 [Zea mays]
 gi|194705708|gb|ACF86938.1| unknown [Zea mays]
 gi|413956425|gb|AFW89074.1| hypothetical protein ZEAMMB73_742653 [Zea mays]
          Length = 635

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/548 (39%), Positives = 344/548 (62%), Gaps = 6/548 (1%)

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           DVC   +LV    +      +  +R +FDRM   +  SW+AI++ +V+ G + + A+ ++
Sbjct: 91  DVCSYNTLVAALGRSP--RGLASARALFDRMPRRDHFSWSAIVSAHVRHG-QPRAALAIY 147

Query: 377 SDMIQ---GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
             M++   G  A N FT +S L A      +    +++ H V+RG   D  V ++L  MY
Sbjct: 148 RRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMY 207

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+ GR++DAR  F+ +  +++VS+  M+D Y       + F L   +  +G+  + +T+A
Sbjct: 208 AKFGRLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFRLFVRMMRSGILPNEFTYA 267

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
            +L   +   +   G+Q+H R+ KS    +    +AL+ MYS+  ++  A +VF+ M   
Sbjct: 268 GVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYSKYGDMGTAMRVFRGMPKP 327

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +++SWT+MI+G+A++G    AL  F  +L+ G +P+ +T++ VLSAC+HAGL+ +G   F
Sbjct: 328 DLVSWTAMISGYAQNGQPDEALHCFDMLLSSGFRPDHVTFVGVLSACAHAGLVDKGLGIF 387

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            S+ D++GI    +HYAC++DLL RSG    A + I +MP+  +  +W + LG CR+H +
Sbjct: 388 HSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDMINTMPVKPNKFLWASLLGGCRIHKN 447

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
             L   AAE + E +P++PA ++ L+N+YAS G ++ V N+R+ M+ R + K    SWIE
Sbjct: 448 VRLAWWAAEALFEIEPENPATYVTLANIYASVGLFDEVENMRRTMELRGITKMPASSWIE 507

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
              +VH F VG+ SHP+  EIYA L +L +K++E GY+ DT FVLH++E+EQK Q +  H
Sbjct: 508 VGTRVHVFLVGDKSHPQAEEIYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYH 567

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SE++AVAFG+I+T K  PI+VFKNLR+CGDCHT IK IS +  REI++RDSNRFHH K+G
Sbjct: 568 SERLAVAFGIIATPKGSPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNG 627

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 628 SCSCRDYW 635



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 124/430 (28%), Positives = 209/430 (48%), Gaps = 27/430 (6%)

Query: 95  HLGKLVHSLLTRSKLEPNSVI-LNSLISLYSKCG-DLNEANKIFKSMGNKRDIVSWSSMI 152
           H   L  +L   S L    V   N+L++   +    L  A  +F  M  +RD  SWS+++
Sbjct: 73  HPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRM-PRRDHFSWSAIV 131

Query: 153 SSYVNRGKQVDAIHMFVEML-ELGF--CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           S++V  G+   A+ ++  ML E G     NE+  S+ + A +       G  ++  +++ 
Sbjct: 132 SAHVRHGQPRAALAIYRRMLREPGGSGADNEFTASSALAAATAARCARAGRELHCHVVRR 191

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
           G  D+D  V  AL DM+ K    L+ A  VFD+M  ++ V WT M+ R    G   +  R
Sbjct: 192 G-IDADAVVWSALADMYAKFG-RLDDARSVFDRMPVRDVVSWTAMLDRYFDAGRDGEGFR 249

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
           LF+ M+ SG LP+ FT +GV+ AC+E      GKQ+H    ++        G +LV MY+
Sbjct: 250 LFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDSCFAGSALVHMYS 309

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           K    G +  + +VF  M   +++SWTA+I+GY Q+G  D EA+  F  ++     P+H 
Sbjct: 310 KY---GDMGTAMRVFRGMPKPDLVSWTAMISGYAQNGQPD-EALHCFDMLLSSGFRPDHV 365

Query: 390 TFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKA 445
           TF  VL AC +  L+D  +      H++K    ++    +   +I + +RSG  E A   
Sbjct: 366 TFVGVLSACAHAGLVDKGLG---IFHSIKDKYGIEHTADHYACVIDLLSRSGLFERAEDM 422

Query: 446 FESL-FEKNLVSYNTMVDAYAKNLNSEKAF---ELLHEIEDTGVGTSAYTFASLLSGASS 501
             ++  + N   + +++     + N   A+   E L EIE      +  T+ +L +  +S
Sbjct: 423 INTMPVKPNKFLWASLLGGCRIHKNVRLAWWAAEALFEIEP----ENPATYVTLANIYAS 478

Query: 502 IGAIGKGEQI 511
           +G   + E +
Sbjct: 479 VGLFDEVENM 488



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 60/208 (28%), Positives = 103/208 (49%), Gaps = 5/208 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + + GR  +       M + G  P+  TY+ +L++C    +  LGK VH  + +S+   +
Sbjct: 238 YFDAGRDGEGFRLFVRMMRSGILPNEFTYAGVLRACAEFTSEKLGKQVHGRMAKSRTGDS 297

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
               ++L+ +YSK GD+  A ++F+ M  K D+VSW++MIS Y   G+  +A+H F  +L
Sbjct: 298 CFAGSALVHMYSKYGDMGTAMRVFRGM-PKPDLVSWTAMISGYAQNGQPDEALHCFDMLL 356

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG-HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
             GF P+   F  V+ AC++   V  G  I +    K G   +     C +ID+  +  +
Sbjct: 357 SSGFRPDHVTFVGVLSACAHAGLVDKGLGIFHSIKDKYGIEHTADHYAC-VIDLLSRSGL 415

Query: 232 DLESAYKVFDKMTEK-NTVGWTLMITRC 258
             E A  + + M  K N   W  ++  C
Sbjct: 416 -FERAEDMINTMPVKPNKFLWASLLGGC 442


>gi|224117876|ref|XP_002317690.1| predicted protein [Populus trichocarpa]
 gi|222860755|gb|EEE98302.1| predicted protein [Populus trichocarpa]
          Length = 706

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 241/704 (34%), Positives = 410/704 (58%), Gaps = 7/704 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD  T+  ++K C    N  LGK++  ++     + +  + +SLI LY+  G 
Sbjct: 1   MLGCGVFPDKYTFPPVIKCCTGLNNVRLGKVIQDMILEMGFDLDMFVASSLIKLYADNGC 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A + F  M +K D V W+ MI+ YV  G+   AI +F +M+     P+   F+ V+ 
Sbjct: 61  IEDARRFFDKMIDK-DCVLWNVMINGYVQCGESDSAIKLFKDMMSSEAKPDSVTFACVLS 119

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
              +   V  G  ++G +++ G  D    VG  L+ ++ KG   L  A K+FD M + + 
Sbjct: 120 ISCSEAMVEYGRQLHGLVVRSG-LDFVPLVGNTLVTVYSKGR-QLGDARKLFDMMPQIDL 177

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  MI    Q G   DA  LF +MI +G  PD  T +  + + +E       K++H +
Sbjct: 178 VVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSLKQIKEIHGY 237

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
            +R G+ LDV +  +L+D+Y KC  D  +  + K+F+     +++ +TA+I+GYV +G  
Sbjct: 238 IVRHGVILDVYLNSALIDLYFKCR-DAVM--ACKMFNLSTKFDIVIYTAMISGYVLNG-M 293

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
           +K+A+++F  ++Q ++ PN  TF+S+L AC  L    +  +++ + +K        VG++
Sbjct: 294 NKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIKNELEEKCPVGSA 353

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           +++MYA+ GR++ A   F  +  K+ + +N+++ +++++   E+A  L  ++   GV   
Sbjct: 354 IMNMYAKCGRLDLAHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQMGMEGVKYD 413

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             T ++ LS  ++I A+  G++IH  +IK  FES+    +ALI+MY++C  +  A  VF 
Sbjct: 414 CVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKCGKLNIARLVFN 473

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
            M+++N ++W S+I  +  HG+ A +L +F+ ML +GI+P+ IT++ +LS+C HAG + +
Sbjct: 474 LMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQPDHITFLTILSSCGHAGQVED 533

Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
           G ++FR M +E+GI  +MEHYACM DL GR+G L EA E I SMP      VW T LGAC
Sbjct: 534 GVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEVITSMPFPPAASVWGTLLGAC 593

Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
           RVHG+ EL + A+  +L+ +P++   ++LL+++ A AG W  V  I+  MKER + K  G
Sbjct: 594 RVHGNVELAEVASRYLLDLEPKNSGYYLLLTHVLADAGKWRSVHKIQHLMKERGVQKVPG 653

Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           CSWIE +N    F   + SHP++ +IY+ L  L L++++ GY+P
Sbjct: 654 CSWIEVNNTTCVFFAADGSHPESPQIYSLLKSLLLELRKVGYVP 697



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 146/540 (27%), Positives = 270/540 (50%), Gaps = 11/540 (2%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           D+M+ +   PD  T++ +L           G+ +H L+ RS L+   ++ N+L+++YSK 
Sbjct: 101 DMMSSEAK-PDSVTFACVLSISCSEAMVEYGRQLHGLVVRSGLDFVPLVGNTLVTVYSKG 159

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
             L +A K+F  M  + D+V W+ MI  YV  G   DA  +F EM+  G  P+   F++ 
Sbjct: 160 RQLGDARKLFDMM-PQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSF 218

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           + + + + ++     I+G++++ G    DV +  ALID++ K   D   A K+F+  T+ 
Sbjct: 219 LPSLAESSSLKQIKEIHGYIVRHGVI-LDVYLNSALIDLYFKCR-DAVMACKMFNLSTKF 276

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + V +T MI+     G  +DA+ +F  ++    +P+  T S ++ AC+ L     G++LH
Sbjct: 277 DIVIYTAMISGYVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELH 336

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
            + I+  L     VG ++++MYAKC   G +D +  +F R+   + + W +IIT + Q  
Sbjct: 337 GYIIKNELEEKCPVGSAIMNMYAKC---GRLDLAHLIFGRISIKDAICWNSIITSFSQD- 392

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           G+ +EA+ LF  M    V  +  T ++ L AC N+   +  ++++   +K     D    
Sbjct: 393 GKPEEAIYLFRQMGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDM 452

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           ++LI+MYA+ G++  AR  F  + EKN V++N+++ AY  +     +  L H + + G+ 
Sbjct: 453 SALINMYAKCGKLNIARLVFNLMQEKNEVAWNSIIAAYGYHGYLADSLALFHNMLEEGIQ 512

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQ 545
               TF ++LS     G +  G +    + +  G  +    Y  +  ++ R  +++ AF+
Sbjct: 513 PDHITFLTILSSCGHAGQVEDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFE 572

Query: 546 VFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           V   M      S W +++     HG    A E+  + L D    N   Y+ +    + AG
Sbjct: 573 VITSMPFPPAASVWGTLLGACRVHGNVELA-EVASRYLLDLEPKNSGYYLLLTHVLADAG 631



 Score =  179 bits (455), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 231/449 (51%), Gaps = 26/449 (5%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P     + NR+I  ++ +G +  A    + M   G  PD  T++  L S   S + 
Sbjct: 169 FDMMPQIDLVVWNRMIGGYVQNGFMDDASMLFNEMISAGIKPDSITFTSFLPSLAESSSL 228

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
              K +H  + R  +  +  + ++LI LY KC D   A K+F ++  K DIV +++MIS 
Sbjct: 229 KQIKEIHGYIVRHGVILDVYLNSALIDLYFKCRDAVMACKMF-NLSTKFDIVIYTAMISG 287

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YV  G   DA+ +F  +L+    PN   FS+++ AC+    + +G  ++G+++K    + 
Sbjct: 288 YVLNGMNKDALEIFRWLLQKKMIPNALTFSSILPACAGLAAIKLGRELHGYIIK-NELEE 346

Query: 215 DVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
              VG A+++M+ K G +DL  A+ +F +++ K+ + W  +IT  +Q G P +AI LF  
Sbjct: 347 KCPVGSAIMNMYAKCGRLDL--AHLIFGRISIKDAICWNSIITSFSQDGKPEEAIYLFRQ 404

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M + G   D  T+S  +SAC+ +     GK++H + I+     D+    +L++MYAKC  
Sbjct: 405 MGMEGVKYDCVTVSAALSACANIPALHYGKEIHGFMIKGAFESDLFDMSALINMYAKC-- 462

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G ++ +R VF+ M + N ++W +II  Y    G   +++ LF +M++  + P+H TF +
Sbjct: 463 -GKLNIARLVFNLMQEKNEVAWNSIIAAYGYH-GYLADSLALFHNMLEEGIQPDHITFLT 520

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--------NSLISMYARSGRMEDARKA 445
           +L +CG+      A QV    V+  R + +  G          +  ++ R+G +++A + 
Sbjct: 521 ILSSCGH------AGQV-EDGVRYFRCMTEEYGIPAQMEHYACMADLFGRAGHLDEAFEV 573

Query: 446 FESL-FEKNLVSYNTMVDAYAKNLNSEKA 473
             S+ F      + T++ A   + N E A
Sbjct: 574 ITSMPFPPAASVWGTLLGACRVHGNVELA 602


>gi|356528966|ref|XP_003533068.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930-like [Glycine max]
          Length = 712

 Score =  440 bits (1132), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 237/661 (35%), Positives = 372/661 (56%), Gaps = 43/661 (6%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A +VFD + +     W  MI   +++  P++ + ++L M+ S   PDRFT   ++   + 
Sbjct: 60  ARQVFDAIPQPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTR 119

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
                 GK L + A++ G   ++ V  + + M++ C +   VD +RKVFD      V++W
Sbjct: 120 NMALQYGKVLLNHAVKHGFDSNLFVQKAFIHMFSLCRL---VDLARKVFDMGDAWEVVTW 176

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA- 414
             +++GY +   + K++  LF +M +  V+PN  T   +L AC  L D    + +Y +  
Sbjct: 177 NIMLSGYNRVK-QFKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYIN 235

Query: 415 ---VKRGRALDDCVGNSLISMYARSGRMEDA----------------------------- 442
              V+R   L+    N LI M+A  G M++A                             
Sbjct: 236 GGIVERNLILE----NVLIDMFAACGEMDEAQSVFDNMKNRDVISWTSIVTGFANIGQID 291

Query: 443 --RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
             RK F+ + E++ VS+  M+D Y +     +A  L  E++ + V    +T  S+L+  +
Sbjct: 292 LARKYFDQIPERDYVSWTAMIDGYLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACA 351

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            +GA+  GE +   I K+  +++  + NALI MY +C NV  A +VFKEM  ++  +WT+
Sbjct: 352 HLGALELGEWVKTYIDKNSIKNDTFVGNALIDMYFKCGNVGKAKKVFKEMHHKDKFTWTA 411

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI G A +G    AL +F  M+   I P+ ITYI VL AC+HAG++ +G   F SM  +H
Sbjct: 412 MIVGLAINGHGEEALAMFSNMIEASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQH 471

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI   + HY CMVDLLGR+G L EA E I +MP+  + +VW + LGACRVH + +L + A
Sbjct: 472 GIKPNVTHYGCMVDLLGRAGRLEEAHEVIVNMPVKPNSIVWGSLLGACRVHKNVQLAEMA 531

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ ILE +P++ A ++LL N+YA+   WE +  +RK M ER + K  GCS +E +  V++
Sbjct: 532 AKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGIKKTPGCSLMELNGNVYE 591

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F  G+ SHP++ EIYA+L+ +   + + GY PDT+ V  +L EE K   L++HSEK+A+A
Sbjct: 592 FVAGDQSHPQSKEIYAKLENMMQDLIKAGYSPDTSEVFLDLGEEDKETALYRHSEKLAIA 651

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           + LIS+     IR+ KNLR+C DCH   K +S    RE+++RD  RFHH + G CSCN++
Sbjct: 652 YALISSGPGITIRIVKNLRMCVDCHHMAKLVSEAYNRELIVRDKTRFHHFRHGSCSCNNF 711

Query: 861 W 861
           W
Sbjct: 712 W 712



 Score =  177 bits (448), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 145/531 (27%), Positives = 243/531 (45%), Gaps = 80/531 (15%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q  +    LM      PD  T+  LLK   R+     GK++ +   +   + N  +  + 
Sbjct: 89  QNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFDSNLFVQKAF 148

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM-FVEMLELGFCP 178
           I ++S C  ++ A K+F  MG+  ++V+W+ M+S Y NR KQ     M F+EM + G  P
Sbjct: 149 IHMFSLCRLVDLARKVF-DMGDAWEVVTWNIMLSGY-NRVKQFKKSKMLFIEMEKRGVSP 206

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK---------- 228
           N      ++ ACS  +++  G  IY ++   G  + ++ +   LIDMF            
Sbjct: 207 NSVTLVLMLSACSKLKDLEGGKHIYKYI-NGGIVERNLILENVLIDMFAACGEMDEAQSV 265

Query: 229 ----------------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD 266
                                 G +DL  A K FD++ E++ V WT MI    ++    +
Sbjct: 266 FDNMKNRDVISWTSIVTGFANIGQIDL--ARKYFDQIPERDYVSWTAMIDGYLRMNRFIE 323

Query: 267 AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVD 326
           A+ LF +M +S   PD FT+  +++AC+ L     G+ + ++  +  +  D  VG +L+D
Sbjct: 324 ALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKNDTFVGNALID 383

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
           MY KC   G+V  ++KVF  M   +  +WTA+I G +   G  +EA+ +FS+MI+  + P
Sbjct: 384 MYFKC---GNVGKAKKVFKEMHHKDKFTWTAMIVG-LAINGHGEEALAMFSNMIEASITP 439

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHA--VKRGRALDDCVGNSLISMYARSGRMEDARK 444
           +  T+  VL AC             THA  V++G++         ISM  + G       
Sbjct: 440 DEITYIGVLCAC-------------THAGMVEKGQSF-------FISMTMQHG------- 472

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
                 + N+  Y  MVD   +    E+A E+   I +  V  ++  + SLL GA  +  
Sbjct: 473 -----IKPNVTHYGCMVDLLGRAGRLEEAHEV---IVNMPVKPNSIVWGSLL-GACRVHK 523

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
             +  ++ A+ I      N  +Y  L ++Y+ C   E   QV K M +R +
Sbjct: 524 NVQLAEMAAKQILELEPENGAVYVLLCNIYAACKRWENLRQVRKLMMERGI 574



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 185/406 (45%), Gaps = 39/406 (9%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTV--DGSVDDSRKVFDRMLDHNVMSWTAIIT 360
           KQ+HS  I+ GL+ D      ++   A C     G +  +R+VFD +    +  W  +I 
Sbjct: 24  KQIHSHTIKMGLSSDPLFQKRVI---AFCCAHESGKMIYARQVFDAIPQPTLFIWNTMIK 80

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GY +     +  V ++  M+   + P+ FTF  +LK     +     + +  HAVK G  
Sbjct: 81  GYSRI-NHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKVLLNHAVKHGFD 139

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +  V  + I M++    ++ ARK F+      +V++N M+  Y +    +K+  L  E+
Sbjct: 140 SNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQFKKSKMLFIEM 199

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           E  GV  ++ T   +LS  S +  +  G+ I+  I     E N  + N LI M++ C  +
Sbjct: 200 EKRGVSPNSVTLVLMLSACSKLKDLEGGKHIYKYINGGIVERNLILENVLIDMFAACGEM 259

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFA--AR------------------------- 573
           + A  VF  M++R+VISWTS++TGFA  G    AR                         
Sbjct: 260 DEAQSVFDNMKNRDVISWTSIVTGFANIGQIDLARKYFDQIPERDYVSWTAMIDGYLRMN 319

Query: 574 ----ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
               AL +F +M    +KP+  T +++L+AC+H G +  G +  ++  D++ I       
Sbjct: 320 RFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELG-EWVKTYIDKNSIKNDTFVG 378

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
             ++D+  + G++ +A +  + M    D   W   +    ++G  E
Sbjct: 379 NALIDMYFKCGNVGKAKKVFKEMH-HKDKFTWTAMIVGLAINGHGE 423



 Score =  111 bits (277), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/301 (26%), Positives = 150/301 (49%), Gaps = 13/301 (4%)

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA--RSGRMEDARKAFESLF 450
           S+L+ C ++      +Q+++H +K G + D      +I+      SG+M  AR+ F+++ 
Sbjct: 12  SLLEKCKSMYQ---LKQIHSHTIKMGLSSDPLFQKRVIAFCCAHESGKMIYARQVFDAIP 68

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           +  L  +NTM+  Y++  + +    +   +  + +    +TF  LL G +   A+  G+ 
Sbjct: 69  QPTLFIWNTMIKGYSRINHPQNGVSMYLLMLASNIKPDRFTFPFLLKGFTRNMALQYGKV 128

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +    +K GF+SN  +  A I M+S C  V+ A +VF   +   V++W  M++G+ +   
Sbjct: 129 LLNHAVKHGFDSNLFVQKAFIHMFSLCRLVDLARKVFDMGDAWEVVTWNIMLSGYNRVKQ 188

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR---ME 627
             ++  +F +M   G+ PN +T + +LSACS    + EG KH    Y   GIV+R   +E
Sbjct: 189 FKKSKMLFIEMEKRGVSPNSVTLVLMLSACSKLKDL-EGGKHIYK-YINGGIVERNLILE 246

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           +   ++D+    G + EA     +M  + DV+ W + +      G  +L +   + I E+
Sbjct: 247 N--VLIDMFAACGEMDEAQSVFDNMK-NRDVISWTSIVTGFANIGQIDLARKYFDQIPER 303

Query: 688 D 688
           D
Sbjct: 304 D 304



 Score = 79.3 bits (194), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 102/208 (49%), Gaps = 5/208 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +L   R  +A+     M      PD  T   +L +C       LG+ V + + ++ ++ +
Sbjct: 315 YLRMNRFIEALALFREMQMSNVKPDEFTMVSILTACAHLGALELGEWVKTYIDKNSIKND 374

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + + N+LI +Y KCG++ +A K+FK M +K D  +W++MI      G   +A+ MF  M+
Sbjct: 375 TFVGNALIDMYFKCGNVGKAKKVFKEMHHK-DKFTWTAMIVGLAINGHGEEALAMFSNMI 433

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIY-GFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           E    P+E  +  V+ AC++   V  G   +    ++ G   +    GC ++D+  +   
Sbjct: 434 EASITPDEITYIGVLCACTHAGMVEKGQSFFISMTMQHGIKPNVTHYGC-MVDLLGRAG- 491

Query: 232 DLESAYKVFDKMTEK-NTVGWTLMITRC 258
            LE A++V   M  K N++ W  ++  C
Sbjct: 492 RLEEAHEVIVNMPVKPNSIVWGSLLGAC 519


>gi|224065851|ref|XP_002301973.1| predicted protein [Populus trichocarpa]
 gi|222843699|gb|EEE81246.1| predicted protein [Populus trichocarpa]
          Length = 716

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 239/662 (36%), Positives = 365/662 (55%), Gaps = 72/662 (10%)

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           IR+F  M+  G +PD   L  V+  C+ L    +GKQ+H +A+ +GL LD  V  SL+ M
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 328 YAKCTVDGSVDDSRKVFDRM-----------------------------------LDHNV 352
           Y +      + D+R VFD++                                   ++ N+
Sbjct: 119 YVQFD---HLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNL 175

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW  +I+G+ +SG    +AV +F +M    + P+  + +SVL A G+L    +  Q++ 
Sbjct: 176 VSWNGMISGFNRSGSY-LDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHC 234

Query: 413 HAVKRGRALDDCVGNSLISMY-------------------------------ARSGRMED 441
           + +K+G   D  V ++LI MY                               +R+G +++
Sbjct: 235 YVIKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDN 294

Query: 442 ARKAFESL--FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           A + F+     + N+VS+ +M+ + ++N    +A EL  E++  GV  ++ T   LL   
Sbjct: 295 ALEVFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPAC 354

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
            +I A+  G+  H   +++G  ++  + +ALI MY++C  + A+   F  M +RN++SW 
Sbjct: 355 GNIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWN 414

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           S++ G+A HG    A+ IF  M   G KP+ +++  VLSAC+  GL  EGW +F SM   
Sbjct: 415 SLMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRN 474

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           HG+  RMEHY+CMV LLGRSG L EA   I+ MP   D  VW   L +CRVH   +LG+ 
Sbjct: 475 HGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVHNRVDLGEI 534

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           AA+ + E +P++P  +ILLSN+YAS   W  V  +R  M+ R L K  G SWIE  NKVH
Sbjct: 535 AAKRVFELEPRNPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVH 594

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
               G++SHP+  +I  +L +L +++K+ GY+P T+FVL ++EE+ K Q L  HSEK+AV
Sbjct: 595 MLLAGDSSHPQMPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAV 654

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
             GL++T    P++V KNLR+C DCH  IK+IS    REI +RD+NRFH  K G CSC D
Sbjct: 655 VLGLLNTKPGFPLQVIKNLRICRDCHAVIKFISDFEKREIFVRDTNRFHQFKGGVCSCGD 714

Query: 860 YW 861
           YW
Sbjct: 715 YW 716



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 124/471 (26%), Positives = 214/471 (45%), Gaps = 70/471 (14%)

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           I +F  ML  G  P+      VI+ C+    +  G  ++ F L  G    D  V  +L+ 
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSG-LGLDSVVLSSLLH 117

Query: 225 MFVKGSVDLESAYKVFDKM-----------------------------------TEKNTV 249
           M+V+    L+ A  VFDK+                                    E N V
Sbjct: 118 MYVQFD-HLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLV 176

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  MI+   + G   DA+ +F +M L G  PD  ++S V+ A  +L++   G Q+H + 
Sbjct: 177 SWNGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYV 236

Query: 310 IRTGLALDVCVGCSLVDMYAKCTV----------------------------DGSVDDSR 341
           I+ GL  D  V  +L+DMY KC                              +G VD++ 
Sbjct: 237 IKQGLGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNAL 296

Query: 342 KVFDRM--LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +VF +   +D NV+SWT++I    Q+G +D EA++LF +M    V PN  T   +L ACG
Sbjct: 297 EVFKQFKGMDLNVVSWTSMIASCSQNG-KDMEALELFREMQIEGVKPNSVTIPCLLPACG 355

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
           N+      +  +  +++ G   D  VG++LI MYA+ GRM  +R  F+ +  +NLVS+N+
Sbjct: 356 NIAALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKCGRMLASRLCFDMMPNRNLVSWNS 415

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS- 518
           ++  YA +  + +A  +   ++  G      +F  +LS  +  G   +G      + ++ 
Sbjct: 416 LMAGYAMHGKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNH 475

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
           G E+    Y+ ++++  R   +E A+ + K+M  + +   W ++++    H
Sbjct: 476 GVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSSCRVH 526



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 214/472 (45%), Gaps = 79/472 (16%)

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           I     M  +G  PD      ++K+C        GK +H     S L  +SV+L+SL+ +
Sbjct: 59  IRVFSYMLTQGIVPDSRVLPTVIKTCAALSALQTGKQMHCFALVSGLGLDSVVLSSLLHM 118

Query: 123 YSKCGDLNEANKIF----------------------------------KSMGNKRDIVSW 148
           Y +   L +A  +F                                  + +G + ++VSW
Sbjct: 119 YVQFDHLKDARNVFDKLPQPGVVTSSALISRFARKGRVKETKELFYQTRDLGVELNLVSW 178

Query: 149 SSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
           + MIS +   G  +DA+ MF  M   G  P+    S+V+ A  + +   +G  I+ +++K
Sbjct: 179 NGMISGFNRSGSYLDAVLMFQNMHLEGLKPDGTSVSSVLPAVGDLDMPLMGIQIHCYVIK 238

Query: 209 CGYFDSDVCVGCALIDMFVKGS--------------VDL----------------ESAYK 238
            G    D  V  ALIDM+ K +              VD+                ++A +
Sbjct: 239 QG-LGPDKFVVSALIDMYGKCACASEMSGVFNEMDEVDVGACNALVTGLSRNGLVDNALE 297

Query: 239 VFD--KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           VF   K  + N V WT MI  C+Q G   +A+ LF +M + G  P+  T+  ++ AC  +
Sbjct: 298 VFKQFKGMDLNVVSWTSMIASCSQNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNI 357

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GK  H +++R G+  DV VG +L+DMYAKC   G +  SR  FD M + N++SW 
Sbjct: 358 AALLHGKAAHCFSLRNGIFNDVYVGSALIDMYAKC---GRMLASRLCFDMMPNRNLVSWN 414

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHA 414
           +++ GY    G+  EA+ +F  M +    P+H +F  VL AC  G L +       Y  +
Sbjct: 415 SLMAGYAMH-GKTFEAINIFELMQRCGQKPDHVSFTCVLSACTQGGLTEEG---WFYFDS 470

Query: 415 VKRGRALDDCVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           + R   ++  +   + ++++  RSGR+E+A    + + FE +   +  ++ +
Sbjct: 471 MSRNHGVEARMEHYSCMVTLLGRSGRLEEAYAMIKQMPFEPDSCVWGALLSS 522



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 50/205 (24%), Positives = 97/205 (47%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+  +A+     M  +G  P+  T   LL +C        GK  H    R+ +  +  
Sbjct: 321 QNGKDMEALELFREMQIEGVKPNSVTIPCLLPACGNIAALLHGKAAHCFSLRNGIFNDVY 380

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++LI +Y+KCG +  +   F  M N R++VSW+S+++ Y   GK  +AI++F  M   
Sbjct: 381 VGSALIDMYAKCGRMLASRLCFDMMPN-RNLVSWNSLMAGYAMHGKTFEAINIFELMQRC 439

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+   F+ V+ AC+       G   +  + +    ++ +     ++ +  + S  LE
Sbjct: 440 GQKPDHVSFTCVLSACTQGGLTEEGWFYFDSMSRNHGVEARMEHYSCMVTLLGR-SGRLE 498

Query: 235 SAYKVFDKMT-EKNTVGWTLMITRC 258
            AY +  +M  E ++  W  +++ C
Sbjct: 499 EAYAMIKQMPFEPDSCVWGALLSSC 523


>gi|449457327|ref|XP_004146400.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 245/661 (37%), Positives = 389/661 (58%), Gaps = 23/661 (3%)

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           D +V     LI  + K S  +E A+++FD+M + ++V +  +I    + G  + A +LFL
Sbjct: 71  DCNVFSFNTLISAYAKESY-VEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 273 DMILSGFLPDRFTLSGVVSACS-ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           +M  +    D FTLSG+++AC   + L    +QLH+ ++ TGL   V VG +L+  Y+K 
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSK- 185

Query: 332 TVDGSVDDSRKVFDRML-DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
             +G + ++R++F  +  D + +SW +++  Y+Q     K A++L+ +M    +  + FT
Sbjct: 186 --NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSK-ALELYLEMTVRGLIVDIFT 242

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR-MEDARKAFESL 449
            ASVL A  N+ D     Q +   +K G   +  VG+ LI +Y++ G  M D RK F+ +
Sbjct: 243 LASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEI 302

Query: 450 FEKNLVSYNTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
              +LV +NTM+  Y+   + S++A E   +++  G      +   ++S  S++ +  +G
Sbjct: 303 SNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQG 362

Query: 509 EQIHARIIKSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
            Q+H   +K    SN   + NALI+MYS+C N+  A  +F  M + N +S+ SMI G+A+
Sbjct: 363 RQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQ 422

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG   ++L +F +ML  G  P  IT+I+VL+AC+H G + +G  +F  M  + GI     
Sbjct: 423 HGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAG 482

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           H++CM+DLLGR+G L+EA   I ++P       W   LGACR+HG+ EL   AA  +L+ 
Sbjct: 483 HFSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANRLLQL 542

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           DP + A +++L+N+Y+  G  +  A++RK M++R + K+ GCSWIE + ++H F   +T 
Sbjct: 543 DPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTF 602

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVL-------HELEEEQKVQYLFQHSEKIAVA 800
           HP   +I   L+++  KIK+ GY P+    L        + EEE +   L  HSEK+AV+
Sbjct: 603 HPMIKKIQEYLEEMMRKIKKVGYTPEVRSALVGGDDRVWQREEELR---LGHHSEKLAVS 659

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGL+ST + +PI VFKNLR+C DCH AIKYIS V  REI +RDS+RFH  KDG+CSC  Y
Sbjct: 660 FGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGY 719

Query: 861 W 861
           W
Sbjct: 720 W 720



 Score =  199 bits (506), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 150/586 (25%), Positives = 282/586 (48%), Gaps = 50/586 (8%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L  +   LK+CI  R+   GK +H+L  +S +  ++ + N  + LYSKC  L+ A ++F 
Sbjct: 8   LHNFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67

Query: 138 SMGN------------------------------KRDIVSWSSMISSYVNRGKQVDAIHM 167
              +                              + D VS++++I++Y  RG    A  +
Sbjct: 68  HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F+EM E     + +  S +I AC    NV +   ++   +  G  DS V VG ALI  + 
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACG--INVGLIRQLHALSVVTG-LDSYVSVGNALITSYS 184

Query: 228 KGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
           K    L+ A ++F  ++E ++ V W  M+    Q      A+ L+L+M + G + D FTL
Sbjct: 185 KNGF-LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTL 243

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + V++A + ++    G Q H+  I++G   +  VG  L+D+Y+KC   G + D RKVFD 
Sbjct: 244 ASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKC--GGCMLDCRKVFDE 301

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           + + +++ W  +I+GY        EA++ F  +      P+  +   V+ AC N+   + 
Sbjct: 302 ISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQ 361

Query: 407 AEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             QV+  A+K     +   V N+LI+MY++ G + DA+  F+++ E N VSYN+M+  YA
Sbjct: 362 GRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYA 421

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----E 521
           ++    ++  L   + + G   +  TF S+L+  +  G +  G +I+  ++K  F    E
Sbjct: 422 QHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPE 480

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYK 580
           + H  ++ +I +  R   +  A ++ + +  D     W++++     HG    A++   +
Sbjct: 481 AGH--FSCMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIKAANR 538

Query: 581 MLADGIKP-NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           +L   + P N   Y+ + +  S  G + +     R +  + G+ ++
Sbjct: 539 LLQ--LDPLNAAPYVMLANIYSDNGRLQDA-ASVRKLMRDRGVKKK 581



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 220/409 (53%), Gaps = 21/409 (5%)

Query: 77  DLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           D+D ++L  ++ +C    N  L + +H+L   + L+    + N+LI+ YSK G L EA +
Sbjct: 137 DMDGFTLSGIITAC--GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           IF  +   RD VSW+SM+ +Y+   +   A+ +++EM   G   + +  ++V+ A +N +
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G   +  L+K GY  +   VG  LID++ K    +    KVFD+++  + V W  M
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNS-HVGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTM 313

Query: 255 ITRCTQLGCPRD-AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           I+  +      D A+  F  + + G  PD  +L  V+SACS +   + G+Q+H  A++  
Sbjct: 314 ISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLD 373

Query: 314 LALD-VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           +  + + V  +L+ MY+KC   G++ D++ +FD M +HN +S+ ++I GY Q  G   ++
Sbjct: 374 IPSNRISVNNALIAMYSKC---GNLRDAKTLFDTMPEHNTVSYNSMIAGYAQH-GMGFQS 429

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGN-- 427
           + LF  M++    P + TF SVL AC   G + D     ++Y + +K+   ++   G+  
Sbjct: 430 LHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDG----KIYFNMMKQKFGIEPEAGHFS 485

Query: 428 SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFE 475
            +I +  R+G++ +A +  E++ F+     ++ ++ A   + N E A +
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFFWSALLGACRIHGNVELAIK 534



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 86/317 (27%), Positives = 152/317 (47%), Gaps = 10/317 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           MT +G   D+ T + +L +    ++   G   H+ L +S    NS + + LI LYSKCG 
Sbjct: 231 MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGG 290

Query: 129 -LNEANKIFKSMGNKRDIVSWSSMISSY-VNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
            + +  K+F  + N  D+V W++MIS Y +      +A+  F ++  +G  P++     V
Sbjct: 291 CMLDCRKVFDEISNP-DLVLWNTMISGYSLYEDLSDEALECFRQLQVVGHRPDDCSLVCV 349

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           I ACSN  + + G  ++G  LK     + + V  ALI M+ K   +L  A  +FD M E 
Sbjct: 350 ISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCG-NLRDAKTLFDTMPEH 408

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK-QL 305
           NTV +  MI    Q G    ++ LF  M+  GF P   T   V++AC+       GK   
Sbjct: 409 NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMGFTPTNITFISVLAACAHTGRVEDGKIYF 468

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQ 364
           +    + G+  +      ++D+  +    G + ++ ++ + +  D     W+A++ G  +
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRA---GKLSEAERLIETIPFDPGFFFWSALL-GACR 524

Query: 365 SGGRDKEAVKLFSDMIQ 381
             G  + A+K  + ++Q
Sbjct: 525 IHGNVELAIKAANRLLQ 541



 Score = 57.0 bits (136), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
           R+     + N   +N LIS Y++ + VE A Q+F EM   + +S+ ++I  +A+ G    
Sbjct: 64  RVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQP 123

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACS-HAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           A ++F +M    +  +G T   +++AC  + GLI    +   ++    G+   +     +
Sbjct: 124 AFQLFLEMREAFLDMDGFTLSGIITACGINVGLI----RQLHALSVVTGLDSYVSVGNAL 179

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           +    ++G L EA      +    D + W + + A   H +   G  A E+ LE
Sbjct: 180 ITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHRE---GSKALELYLE 230


>gi|224121210|ref|XP_002318526.1| predicted protein [Populus trichocarpa]
 gi|222859199|gb|EEE96746.1| predicted protein [Populus trichocarpa]
          Length = 552

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 219/551 (39%), Positives = 335/551 (60%), Gaps = 37/551 (6%)

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD-KEAVKLFSDMIQGQVAPNHFTFASVLK 396
           D +R +FD+M + ++ SW  ++TGYV++  RD K A  LF  M +  +   +   +   +
Sbjct: 12  DLARDLFDKMPERDLFSWNVMLTGYVRN--RDLKTARALFERMPERDIVSWNAMLSGYAQ 69

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
              N       E  Y   +K G +      N L++ Y ++GR+EDA++ FES  +  LVS
Sbjct: 70  ---NGFVDEAREIFYKMPLKNGISW-----NGLLAAYVQNGRIEDAKRLFESKMDWTLVS 121

Query: 457 YN--------------------------TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           +N                           M+  Y++N  SE+A     E++      +  
Sbjct: 122 WNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEMQRDCERLNRS 181

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           +F   LS  S+I A+  G Q+H R++K+G+++   + NAL++MY +C +++ A   F+E+
Sbjct: 182 SFTCALSTCSNIAALELGRQLHCRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEI 241

Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
            +++V+SW +MI G+A+HGF   AL +F  M   GI+P+  T ++VL+ACSHAGL+ +G 
Sbjct: 242 LEKDVVSWNTMIHGYARHGFGEEALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGS 301

Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
           ++F SM  ++GI  ++ HY CMVDLLGR+G L EA   +++MP   D   W   LGA R+
Sbjct: 302 EYFYSMNRDYGITAKLVHYTCMVDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRI 361

Query: 671 HGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCS 730
           HG+TELG+ AA++I E +P +   +ILLS LYA++G W     +R  M+ + + K  G S
Sbjct: 362 HGNTELGEKAAQIIFEMEPHNSGMYILLSKLYAASGRWSDAGKMRLEMRNKGVKKVPGYS 421

Query: 731 WIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYL 790
           W+E  NK+H F VG+TSHP T +IY  L+++ LK+K+ GY+  TN V H++EEE+KV  L
Sbjct: 422 WLEVQNKIHTFKVGDTSHPHTDKIYTFLEEMDLKLKQEGYISSTNLVFHDVEEEEKVHML 481

Query: 791 FQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI 850
             HSEK+AVA+G++     +PIRV KNLRVC DCH AIKYIS + GR I+LRD++RFH+ 
Sbjct: 482 KYHSEKLAVAYGILYIPAGRPIRVIKNLRVCEDCHNAIKYISKIVGRLIILRDNHRFHYF 541

Query: 851 KDGKCSCNDYW 861
           + G CSC D+W
Sbjct: 542 EGGSCSCRDFW 552



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 173/355 (48%), Gaps = 22/355 (6%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           DL++A  +F++M E++ V W  M++   Q G   +A  +F  M L     +  + +G+++
Sbjct: 41  DLKTARALFERMPERDIVSWNAMLSGYAQNGFVDEAREIFYKMPLK----NGISWNGLLA 96

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           A  +       K+L           +  +  +LV     C + G V   R +FD M   +
Sbjct: 97  AYVQNGRIEDAKRL----------FESKMDWTLVSW--NCLMGGFVRKRRNLFDNMPQRD 144

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            +SW+A+I GY Q+G  + EA+  F +M +     N  +F   L  C N+    +  Q++
Sbjct: 145 SISWSAMIAGYSQNGCSE-EALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLH 203

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              VK G      VGN+L++MY + G +++AR AF+ + EK++VS+NTM+  YA++   E
Sbjct: 204 CRLVKAGYQTGWYVGNALLAMYCKCGSIDEARDAFQEILEKDVVSWNTMIHGYARHGFGE 263

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNAL 530
           +A  +   ++ TG+     T  S+L+  S  G + +G E  ++     G  +    Y  +
Sbjct: 264 EALTVFELMKTTGIRPDDATMVSVLAACSHAGLVDQGSEYFYSMNRDYGITAKLVHYTCM 323

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKM 581
           + +  R   +E A  + K M  + +  +W +++     HG      +A +I ++M
Sbjct: 324 VDLLGRAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEM 378



 Score =  133 bits (335), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 204/430 (47%), Gaps = 64/430 (14%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           DL +++++L   +R+R+    K   +L  R   E + V  N+++S Y++ G ++EA +IF
Sbjct: 25  DLFSWNVMLTGYVRNRDL---KTARALFERMP-ERDIVSWNAMLSGYAQNGFVDEAREIF 80

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
             M  K  I SW+ ++++YV  G+  DA  +F   ++         ++ V   C      
Sbjct: 81  YKMPLKNGI-SWNGLLAAYVQNGRIEDAKRLFESKMD---------WTLVSWNC------ 124

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
                                    L+  FV+   +L      FD M +++++ W+ MI 
Sbjct: 125 -------------------------LMGGFVRKRRNL------FDNMPQRDSISWSAMIA 153

Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
             +Q GC  +A+  F++M       +R + +  +S CS +     G+QLH   ++ G   
Sbjct: 154 GYSQNGCSEEALHFFVEMQRDCERLNRSSFTCALSTCSNIAALELGRQLHCRLVKAGYQT 213

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
              VG +L+ MY KC   GS+D++R  F  +L+ +V+SW  +I GY +  G  +EA+ +F
Sbjct: 214 GWYVGNALLAMYCKC---GSIDEARDAFQEILEKDVVSWNTMIHGYARH-GFGEEALTVF 269

Query: 377 SDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
             M    + P+  T  SVL AC +  L+D   +E  Y+     G          ++ +  
Sbjct: 270 ELMKTTGIRPDDATMVSVLAACSHAGLVDQG-SEYFYSMNRDYGITAKLVHYTCMVDLLG 328

Query: 435 RSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNS---EKAFELLHEIEDTGVGTSAY 490
           R+G++E+A+   +++ FE +  ++  ++ A   + N+   EKA +++ E+E    G   Y
Sbjct: 329 RAGQLEEAQNLMKNMPFEPDAATWGALLGASRIHGNTELGEKAAQIIFEMEPHNSGM--Y 386

Query: 491 TFASLLSGAS 500
              S L  AS
Sbjct: 387 ILLSKLYAAS 396



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 124/274 (45%), Gaps = 38/274 (13%)

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           +IS Y R+ + + AR  F+ + E++L S+N M+  Y +N + + A  L   + +  +   
Sbjct: 1   MISGYLRNHKFDLARDLFDKMPERDLFSWNVMLTGYVRNRDLKTARALFERMPERDI--- 57

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             ++ ++LSG +  G + +  +I  ++ +K+G       +N L++ Y +   +E A ++F
Sbjct: 58  -VSWNAMLSGYAQNGFVDEAREIFYKMPLKNGIS-----WNGLLAAYVQNGRIEDAKRLF 111

Query: 548 K--------------------------EMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
           +                           M  R+ ISW++MI G++++G +  AL  F +M
Sbjct: 112 ESKMDWTLVSWNCLMGGFVRKRRNLFDNMPQRDSISWSAMIAGYSQNGCSEEALHFFVEM 171

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
             D  + N  ++   LS CS+   +  G +       + G          ++ +  + GS
Sbjct: 172 QRDCERLNRSSFTCALSTCSNIAALELG-RQLHCRLVKAGYQTGWYVGNALLAMYCKCGS 230

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           + EA +  + + L  DV+ W T +     HG  E
Sbjct: 231 IDEARDAFQEI-LEKDVVSWNTMIHGYARHGFGE 263


>gi|296088012|emb|CBI35295.3| unnamed protein product [Vitis vinifera]
          Length = 645

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 234/626 (37%), Positives = 355/626 (56%), Gaps = 42/626 (6%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++FD++   + + W  +I      G    AI L+  M+  G  P+++T   V+ ACS 
Sbjct: 62  ARRLFDEIPNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSG 121

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L     G ++HS A   GL  DV V  +LVD YAKC   G + +++++F  M   +V++W
Sbjct: 122 LLAIEDGVEIHSHAKMFGLESDVFVCTALVDFYAKC---GILVEAQRLFSSMSHRDVVAW 178

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I G    G  D +AV+L   M +  + PN  T   VL  C  LL             
Sbjct: 179 NAMIAGCSLYGLCD-DAVQLIMQMQEEGICPNSSTIVGVLPTCQCLLY------------ 225

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
                                     ARK F+ +  +N VS++ M+  Y  +   ++A +
Sbjct: 226 --------------------------ARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALD 259

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           +   ++ +G+     T   +L   S + A+  G   H  +I  GF ++  I NALI MYS
Sbjct: 260 IFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYS 319

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  +  A +VF  M+  +++SW +MI G+  HG    AL +F+ +LA G+KP+ IT+I 
Sbjct: 320 KCGKISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFIC 379

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +LS+CSH+GL+ EG   F +M  +  IV RMEH  CMVD+LGR+G + EA  FIR+MP  
Sbjct: 380 LLSSCSHSGLVMEGRLWFDAMSRDFSIVPRMEHCICMVDILGRAGLIDEAHHFIRNMPFE 439

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            DV +W   L ACR+H + ELG+  ++ I    P+     +LLSN+Y++AG W+  A+IR
Sbjct: 440 PDVRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTGNFVLLSNIYSAAGRWDDAAHIR 499

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
              K+  L K  GCSWIE +  VH F  G+ SH +  +I  +L++L +++K  GY  + +
Sbjct: 500 ITQKDWGLKKIPGCSWIEINGIVHAFVGGDQSHLQLSQINRKLEELLVEMKRLGYQAECS 559

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
           FV  ++EEE+K Q L  HSEK+A+AFG+++    +PI V KNLRVCGDCHTAIK+++++T
Sbjct: 560 FVFQDVEEEEKEQILLYHSEKLAIAFGILNLKAGRPILVTKNLRVCGDCHTAIKFMTLIT 619

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            REI +RD+NRFHH K+G C+C D+W
Sbjct: 620 KREITVRDANRFHHFKNGTCNCGDFW 645



 Score =  180 bits (456), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 138/516 (26%), Positives = 234/516 (45%), Gaps = 51/516 (9%)

Query: 79  DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           + Y  LL++CI+S++    K +H    ++    +S +L+ L  LY  C  +  A ++F  
Sbjct: 9   NNYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDE 68

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           + N   ++ W+ +I +Y   G    AI ++  ML LG  PN+Y +  V++ACS    +  
Sbjct: 69  IPNP-SVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIED 127

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           G  I+      G  +SDV V  AL+D + K  + +E A ++F  M+ ++ V W  MI  C
Sbjct: 128 GVEIHSHAKMFG-LESDVFVCTALVDFYAKCGILVE-AQRLFSSMSHRDVVAWNAMIAGC 185

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           +  G   DA++L + M   G  P+  T+ GV+  C  L                      
Sbjct: 186 SLYGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTCQCL---------------------- 223

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
                   +YA           RK+FD M   N +SW+A+I GYV S    KEA+ +F  
Sbjct: 224 --------LYA-----------RKIFDVMGVRNEVSWSAMIGGYVASDCM-KEALDIFRM 263

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    + P+  T   VL AC +L         + + + RG A D  + N+LI MY++ G+
Sbjct: 264 MQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKCGK 323

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +  AR+ F  +   ++VS+N M+  Y  +    +A  L H++   G+     TF  LLS 
Sbjct: 324 ISFAREVFNRMDRHDIVSWNAMIIGYGIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 383

Query: 499 ASSIGAIGKGE---QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRN 554
            S  G + +G       +R         HCI   ++ +  R   ++ A    + M  + +
Sbjct: 384 CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI--CMVDILGRAGLIDEAHHFIRNMPFEPD 441

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           V  W+++++    H       E+  K+ + G +  G
Sbjct: 442 VRIWSALLSACRIHKNIELGEEVSKKIQSLGPESTG 477



 Score =  169 bits (427), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 209/451 (46%), Gaps = 54/451 (11%)

Query: 40  PTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG 97
           P  S  L N++I  Y  N G    AI     M   G  P+  TY  +LK+C        G
Sbjct: 70  PNPSVILWNQIIRAYAWN-GPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDG 128

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
             +HS      LE +  +  +L+  Y+KCG L EA ++F SM + RD+V+W++MI+    
Sbjct: 129 VEIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSH-RDVVAWNAMIAGCSL 187

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G   DA+ + ++M E G CPN      V+  C                 +C        
Sbjct: 188 YGLCDDAVQLIMQMQEEGICPNSSTIVGVLPTC-----------------QC-------- 222

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
                          L  A K+FD M  +N V W+ MI       C ++A+ +F  M LS
Sbjct: 223 ---------------LLYARKIFDVMGVRNEVSWSAMIGGYVASDCMKEALDIFRMMQLS 267

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
           G  PD  T+ GV+ ACS L     G   H + I  G A D  +  +L+DMY+KC   G +
Sbjct: 268 GIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIVRGFATDTLICNALIDMYSKC---GKI 324

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
             +R+VF+RM  H+++SW A+I GY    G   EA+ LF D++   + P+  TF  +L +
Sbjct: 325 SFAREVFNRMDRHDIVSWNAMIIGY-GIHGLGMEALGLFHDLLALGLKPDDITFICLLSS 383

Query: 398 C---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKN 453
           C   G +++  +     +        ++ C+   ++ +  R+G +++A     ++ FE +
Sbjct: 384 CSHSGLVMEGRLWFDAMSRDFSIVPRMEHCI--CMVDILGRAGLIDEAHHFIRNMPFEPD 441

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +  ++ ++ A   + N E   E+  +I+  G
Sbjct: 442 VRIWSALLSACRIHKNIELGEEVSKKIQSLG 472



 Score =  117 bits (292), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 157/339 (46%), Gaps = 12/339 (3%)

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
            +  +L+AC        A++++ H +K     D  V + L  +Y    ++  AR+ F+ +
Sbjct: 10  NYLHLLEACIQSKSLTEAKKIHQHFLKNTSNADSSVLHKLTRLYLSCNQVVLARRLFDEI 69

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
              +++ +N ++ AYA N   + A +L H +   GV  + YT+  +L   S + AI  G 
Sbjct: 70  PNPSVILWNQIIRAYAWNGPFDGAIDLYHSMLHLGVRPNKYTYPFVLKACSGLLAIEDGV 129

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           +IH+     G ES+  +  AL+  Y++C  +  A ++F  M  R+V++W +MI G + +G
Sbjct: 130 EIHSHAKMFGLESDVFVCTALVDFYAKCGILVEAQRLFSSMSHRDVVAWNAMIAGCSLYG 189

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
               A+++  +M  +GI PN  T + VL  C       +   + R ++D  G+   +  +
Sbjct: 190 LCDDAVQLIMQMQEEGICPNSSTIVGVLPTC-------QCLLYARKIFDVMGVRNEVS-W 241

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSA---DVLVWRTFLGACRVHGDTELGKHA-AEMIL 685
           + M+     S  + EAL+  R M LS    D+      L AC      + G  +   +I+
Sbjct: 242 SAMIGGYVASDCMKEALDIFRMMQLSGIDPDLTTMLGVLPACSHLAALQHGFCSHGYLIV 301

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
                D      L ++Y+  G   +   +  RM   +++
Sbjct: 302 RGFATDTLICNALIDMYSKCGKISFAREVFNRMDRHDIV 340


>gi|15231970|ref|NP_187494.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207322|sp|Q9SR82.1|PP219_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g08820
 gi|6403507|gb|AAF07847.1|AC010871_23 unknown protein [Arabidopsis thaliana]
 gi|12322725|gb|AAG51349.1|AC012562_10 unknown protein; 90102-88045 [Arabidopsis thaliana]
 gi|332641162|gb|AEE74683.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 685

 Score =  440 bits (1131), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 220/596 (36%), Positives = 354/596 (59%), Gaps = 4/596 (0%)

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           + + LFL +   G     FT   V+ AC+       G  LHS  ++ G   DV    SL+
Sbjct: 94  ETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLL 153

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
            +Y+     G ++D+ K+FD + D +V++WTA+ +GY  SG R +EA+ LF  M++  V 
Sbjct: 154 SIYSG---SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG-RHREAIDLFKKMVEMGVK 209

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+ +    VL AC ++ D +  E +  +  +     +  V  +L+++YA+ G+ME AR  
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F+S+ EK++V+++TM+  YA N   ++  EL  ++    +    ++    LS  +S+GA+
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             GE   + I +  F +N  + NALI MY++C  +   F+VFKEM++++++   + I+G 
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           AK+G    +  +F +    GI P+G T++ +L  C HAGLI +G + F ++   + + + 
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           +EHY CMVDL GR+G L +A   I  MP+  + +VW   L  CR+  DT+L +   + ++
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
             +P +   ++ LSN+Y+  G W+  A +R  M ++ + K  G SWIE + KVH+F   +
Sbjct: 510 ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADD 569

Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
            SHP + +IYA+L+ L  +++  G++P T FV  ++EEE+K + L  HSEK+AVA GLIS
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIS 629

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           T   + IRV KNLRVCGDCH  +K IS +T REIV+RD+NRFH   +G CSCNDYW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/410 (28%), Positives = 211/410 (51%), Gaps = 26/410 (6%)

Query: 48  NRLIYH-LNDGRVQKAIF--TLDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH 101
           N  +Y+ L +G V   +F  TLDL   + + G +    T+ L+LK+C R+ +  LG  +H
Sbjct: 75  NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134

Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQ 161
           SL+ +     +   + SL+S+YS  G LN+A+K+F  + + R +V+W+++ S Y   G+ 
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRH 193

Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
            +AI +F +M+E+G  P+ Y    V+ AC +  ++  G  I  ++ +      +  V   
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME-MQKNSFVRTT 252

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           L++++ K    +E A  VFD M EK+ V W+ MI        P++ I LFL M+     P
Sbjct: 253 LVNLYAKCG-KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D+F++ G +S+C+ L     G+   S   R     ++ +  +L+DMYAKC   G++    
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC---GAMARGF 368

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--- 398
           +VF  M + +++   A I+G  ++ G  K +  +F    +  ++P+  TF  +L  C   
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKN-GHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427

Query: 399 GNLLDS----NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
           G + D     N    VY  A+KR      C    ++ ++ R+G ++DA +
Sbjct: 428 GLIQDGLRFFNAISCVY--ALKRTVEHYGC----MVDLWGRAGMLDDAYR 471



 Score =  103 bits (256), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 50/314 (15%)

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           N+  YN++++ +  N    +  +L   I   G+    +TF  +L   +   +   G  +H
Sbjct: 75  NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           + ++K GF  +     +L+S+YS    +  A ++F E+ DR+V++WT++ +G+   G   
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-W--KHFRSMYDEHGIVQRMEHY 629
            A+++F KM+  G+KP+    + VLSAC H G +  G W  K+   M  +     R    
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR---- 250

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT-------------------------- 663
             +V+L  + G + +A     SM +  D++ W T                          
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309

Query: 664 ---------FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN----LYASAGHWEY 710
                    FL +C   G  +LG+    +I   D  +   ++ ++N    +YA  G    
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLI---DRHEFLTNLFMANALIDMYAKCGAMAR 366

Query: 711 VANIRKRMKERNLI 724
              + K MKE++++
Sbjct: 367 GFEVFKEMKEKDIV 380



 Score = 48.9 bits (115), Expect = 0.011,   Method: Compositional matrix adjust.
 Identities = 64/310 (20%), Positives = 122/310 (39%), Gaps = 48/310 (15%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           +L+S A ++  +   +QIH  +I      +  + N L+         + ++ +F   +  
Sbjct: 18  TLISVACTVNHL---KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP 74

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS-----------H 602
           N+  + S+I GF  +      L++F  +   G+  +G T+  VL AC+           H
Sbjct: 75  NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134

Query: 603 AGLISEGWKH-------FRSMY-------DEHGIVQRMEH-----YACMVDLLGRSGSLT 643
           + ++  G+ H         S+Y       D H +   +       +  +      SG   
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194

Query: 644 EALEFIR---SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLS 699
           EA++  +    M +  D       L AC   GD + G+   + + E + Q +      L 
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT-LEIYAEL 758
           NLYA  G  E   ++   M E++++  +      A N          S PK  +E++ ++
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN----------SFPKEGIELFLQM 304

Query: 759 DQLALKIKEF 768
            Q  LK  +F
Sbjct: 305 LQENLKPDQF 314


>gi|414867972|tpg|DAA46529.1| TPA: hypothetical protein ZEAMMB73_503614 [Zea mays]
          Length = 993

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 246/795 (30%), Positives = 440/795 (55%), Gaps = 11/795 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G +++A+     M ++G   + +  + ++  C    +   G  V + +  S L  +  
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSLI+++     + +A ++F  M  +RD +SW++MIS Y +         +  +M   
Sbjct: 182 VANSLITMFGNLRRVQDAERLFDRM-EERDRISWNAMISMYSHEEVYSKCFIVLSDMRHG 240

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              P+     +++  C++++ VA+G  I+   +  G   S   +  AL++M+      L+
Sbjct: 241 EVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLIN-ALVNMYSTAG-KLD 298

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSAC 293
            A  +F  M+ ++ + W  MI+   Q     +A+     ++ +    P+  T S  + AC
Sbjct: 299 EAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGAC 358

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S  E   +G+ +H+  ++  L   + +G SL+ MY+KC    S++D+ +VF+ M  ++V+
Sbjct: 359 SSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCN---SMEDTERVFESMPCYDVV 415

Query: 354 SWTAIITGYVQSGGRD-KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD-SNVAEQVY 411
           S   +  GY  +   D   A+++FS M    + PN+ T  ++   C +L D  +    ++
Sbjct: 416 SCNVLTGGY--AALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLH 473

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            +  + G   D+ + NSLI+MYA  G +E +   F  +  K+++S+N ++ A  ++   E
Sbjct: 474 AYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A +L  + +  G     +  A  LS ++++ ++ +G Q+H   +K+G + +  + NA +
Sbjct: 534 EAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQLHGLSVKNGLDCDSHVVNATM 593

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  ++   +   +   R    W ++I+G+A++G+   A + F  M++ G KP+ +
Sbjct: 594 DMYGKCGKMDCMLKTLPDPAHRPTQCWNTLISGYARYGYFKEAEDTFKHMVSVGQKPDYV 653

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++A+LSACSHAGLI +G  ++ SM    G+   ++H  C+VDLLGR G   EA +FI  
Sbjct: 654 TFVALLSACSHAGLIDKGMDYYNSMAPTFGVSPGIKHCVCIVDLLGRLGKFAEAEKFIDE 713

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+  + L+WR+ L + R H + ++G+ AA+ +LE DP D +A++LLSNLYA+   W  V
Sbjct: 714 MPVLPNDLIWRSLLSSSRTHKNLDIGRKAAKNLLELDPFDDSAYVLLSNLYATNARWVDV 773

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
             +R  MK   L K   CSW++  N+V  F +G+ SH    +IY +LD++ LK++E GY+
Sbjct: 774 DKLRSHMKTIKLNKRPACSWLKLKNEVSTFGIGDRSHMHAEKIYVKLDEILLKLREVGYV 833

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
            DT+  LH+ +EEQK   L+ HSEK+A+A+GL+   +   IR+FKNLRVC DCH   K +
Sbjct: 834 ADTSSALHDTDEEQKEHNLWNHSEKLALAYGLLVVPEGSTIRIFKNLRVCADCHLVFKLV 893

Query: 832 SMVTGREIVLRDSNR 846
           SMV  REIVLRD  R
Sbjct: 894 SMVFHREIVLRDPYR 908



 Score =  206 bits (523), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 152/581 (26%), Positives = 282/581 (48%), Gaps = 17/581 (2%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G  +H+L  R+ L  N  I  +L+ LY   G +  A ++F  M  +R++VSW++++ +  
Sbjct: 63  GAAIHALTHRAGLMGNVYIGTALLHLYGSRGLVLNAQRLFWEM-PQRNVVSWTAIMVALS 121

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G   +A+  +  M + G   N    + V+  C   E+   G  +   ++  G   + V
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLL-THV 180

Query: 217 CVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            V  +LI MF  G++  ++ A ++FD+M E++ + W  MI+  +          +  DM 
Sbjct: 181 SVANSLITMF--GNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVLSDMR 238

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
                PD  TL  +VS C+  +L   G  +HS  + +GL   V +  +LV+MY   +  G
Sbjct: 239 HGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMY---STAG 295

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASV 394
            +D++  +F  M   +V+SW  +I+ YVQS     EA++    ++Q  +  PN  TF+S 
Sbjct: 296 KLDEAESLFRNMSRRDVISWNTMISSYVQSNS-CVEALETLGQLLQTDEGPPNSMTFSSA 354

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEK 452
           L AC +     +      HA+   R+L +   +GNSL++MY++   MED  + FES+   
Sbjct: 355 LGACSS--PEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCY 412

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI-GKGEQI 511
           ++VS N +   YA   +   A  +   +  TG+  +  T  +L     S+G +   G  +
Sbjct: 413 DVVSCNVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPL 472

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HA + ++G  S+  I N+LI+MY+ C ++E++  +F  + +++VISW ++I    +HG  
Sbjct: 473 HAYVTQTGLLSDEYITNSLITMYATCGDLESSTGIFSRINNKSVISWNAIIAANVRHGRG 532

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A+++F      G K +       LS+ ++   + EG +    +  ++G+         
Sbjct: 533 EEAIKLFMDSQHAGNKLDRFCLAECLSSSANLASLEEGMQ-LHGLSVKNGLDCDSHVVNA 591

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
            +D+ G+ G +   L+ +   P       W T +     +G
Sbjct: 592 TMDMYGKCGKMDCMLKTLPD-PAHRPTQCWNTLISGYARYG 631



 Score =  192 bits (489), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 142/537 (26%), Positives = 261/537 (48%), Gaps = 11/537 (2%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN---TENVAIG 199
           R   SW + +S     G +  A  +   M E     + +  ++++ AC +    E  A G
Sbjct: 4   RTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGFALASLVTACEHRGWQEGAACG 63

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+    + G    +V +G AL+ ++    + L +A ++F +M ++N V WT ++   +
Sbjct: 64  AAIHALTHRAGLM-GNVYIGTALLHLYGSRGLVL-NAQRLFWEMPQRNVVSWTAIMVALS 121

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             GC  +A+  +  M   G + +   L+ VVS C  LE   +G Q+ +  + +GL   V 
Sbjct: 122 SNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHVVVSGLLTHVS 181

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  SL+ M+        V D+ ++FDRM + + +SW A+I+ Y       K  + L SDM
Sbjct: 182 VANSLITMFGNLR---RVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCFIVL-SDM 237

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
             G+V P+  T  S++  C +     +   +++  V  G      + N+L++MY+ +G++
Sbjct: 238 RHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMYSTAGKL 297

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG-TSAYTFASLLSG 498
           ++A   F ++  ++++S+NTM+ +Y ++ +  +A E L ++  T  G  ++ TF+S L  
Sbjct: 298 DEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTFSSALGA 357

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            SS  A+  G  IHA I++   ++   I N+L++MYS+C ++E   +VF+ M   +V+S 
Sbjct: 358 CSSPEALMNGRTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMPCYDVVSC 417

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
             +  G+A     A A+ +F  M   GIKPN IT I +   C   G +        +   
Sbjct: 418 NVLTGGYAALEDVANAMRVFSWMRGTGIKPNYITMINLQGTCKSLGDLHSYGMPLHAYVT 477

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           + G++        ++ +    G L E+   I S   +  V+ W   + A   HG  E
Sbjct: 478 QTGLLSDEYITNSLITMYATCGDL-ESSTGIFSRINNKSVISWNAIIAANVRHGRGE 533



 Score =  163 bits (413), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 198/420 (47%), Gaps = 19/420 (4%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFL-----DMILSGFLPDRFTLSGVVSACSE-- 295
           M  + +  W   ++ C + G    A  L       D+ LSGF      L+ +V+AC    
Sbjct: 1   MPHRTSSSWYTAVSGCARCGLESTAFTLLRVMRERDVPLSGF-----ALASLVTACEHRG 55

Query: 296 -LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
             E    G  +H+   R GL  +V +G +L+ +Y      G V +++++F  M   NV+S
Sbjct: 56  WQEGAACGAAIHALTHRAGLMGNVYIGTALLHLYGS---RGLVLNAQRLFWEMPQRNVVS 112

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTAI+   + S G  +EA+  +  M +  V  N    A+V+  CG L D     QV  H 
Sbjct: 113 WTAIMVA-LSSNGCMEEALVAYRRMRKEGVMCNANALATVVSLCGALEDEVAGLQVTAHV 171

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           V  G      V NSLI+M+    R++DA + F+ + E++ +S+N M+  Y+      K F
Sbjct: 172 VVSGLLTHVSVANSLITMFGNLRRVQDAERLFDRMEERDRISWNAMISMYSHEEVYSKCF 231

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            +L ++    V     T  SL+S  +S   +  G  IH+  + SG   +  + NAL++MY
Sbjct: 232 IVLSDMRHGEVKPDVTTLCSLVSVCASSDLVALGSGIHSLCVSSGLHCSVPLINALVNMY 291

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML-ADGIKPNGITY 593
           S    ++ A  +F+ M  R+VISW +MI+ + +      ALE   ++L  D   PN +T+
Sbjct: 292 STAGKLDEAESLFRNMSRRDVISWNTMISSYVQSNSCVEALETLGQLLQTDEGPPNSMTF 351

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            + L ACS    +  G +   +M  +  +   +     ++ +  +  S+ +      SMP
Sbjct: 352 SSALGACSSPEALMNG-RTIHAMILQRSLQNVLLIGNSLLTMYSKCNSMEDTERVFESMP 410


>gi|449516914|ref|XP_004165491.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At5g52630-like [Cucumis
           sativus]
          Length = 598

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 230/560 (41%), Positives = 347/560 (61%), Gaps = 5/560 (0%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G QLH+  ++ GL     V  +L+++Y+K  +      S +VFD     +  +W+++I+ 
Sbjct: 44  GLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLF---SLQVFDETPKKSSTTWSSVISA 100

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q+      A++ F  M+   V P+   + S  KACG L  S+V + V+  AVK G   
Sbjct: 101 FAQNEA-PLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYC 159

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  VG+SL+ MYA+ G + DAR  F+ + E+N+VS++ M+  YA+  +  +A  L  +  
Sbjct: 160 DVFVGSSLVDMYAKCGEIGDARHLFDEMPERNVVSWSGMIYGYAQLDDGVEALTLFKQAL 219

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              V  + +TF+S++   SS   +  G+ IH   +K  F+S+  + +ALIS+YS+C  +E
Sbjct: 220 IEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIE 279

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A+QVF E+  RN+  W SM+   A+H    R   +F +M   G+KPN I +++VL ACS
Sbjct: 280 GAYQVFDEIPTRNLGLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACS 339

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGL+ +G ++F  M D +GI    EHYA +VDLLGR+G L EA+  I+ MP+     VW
Sbjct: 340 HAGLVEKGREYFSLMRD-YGIEPETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVW 398

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              L  CR+H DTE+    A+ ILE D      H+LLSN YA+AG +E  A +RK +++R
Sbjct: 399 GALLTGCRIHKDTEMAAFVADRILEMDSSSSGLHVLLSNAYAAAGRYEEAARMRKMLRDR 458

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + KE G SW+E  NKVH F  G+ SH K +EIY +L++L  ++++ GY+ DT+FVL  +
Sbjct: 459 GVKKETGLSWVEEGNKVHTFTAGDRSHAKWVEIYEKLEELEEEMEKAGYVADTSFVLRAV 518

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           + E+K + +  HSE++A+AFGLI+    +PIRV KNLRVCGDCH AIK++S   GR +++
Sbjct: 519 DGEEKNETIRYHSERLAIAFGLITFPPGRPIRVMKNLRVCGDCHAAIKFMSKCCGRVLIV 578

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFH  +DGKCSC DYW
Sbjct: 579 RDNNRFHRFEDGKCSCGDYW 598



 Score =  177 bits (450), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 206/402 (51%), Gaps = 8/402 (1%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI+++ K  + L S  +VFD+  +K++  W+ +I+   Q   P  A++ F  M+  G  P
Sbjct: 66  LINLYSKTQLPLFS-LQVFDETPKKSSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRP 124

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D         AC  L     GK +H  A++TG   DV VG SLVDMYAKC   G + D+R
Sbjct: 125 DDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKC---GEIGDAR 181

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            +FD M + NV+SW+ +I GY Q      EA+ LF   +   V  N FTF+SV++ C + 
Sbjct: 182 HLFDEMPERNVVSWSGMIYGYAQLDD-GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSS 240

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
               + + ++   +K        VG++LIS+Y++ G +E A + F+ +  +NL  +N+M+
Sbjct: 241 TFLELGKLIHGLCLKMSFDSSSFVGSALISLYSKCGVIEGAYQVFDEIPTRNLGLWNSML 300

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
            A A++ ++++ F L  E+ + G+  +   F S+L   S  G + KG +  + +   G E
Sbjct: 301 IACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIE 360

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKHGFAARALEIFYK 580
                Y +L+ +  R   ++ A  V K+M  R   S W +++TG   H     A  +  +
Sbjct: 361 PETEHYASLVDLLGRAGKLQEAVSVIKQMPMRPTESVWGALLTGCRIHKDTEMAAFVADR 420

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
           +L      +G+ ++ + +A + AG   E  +  R M  + G+
Sbjct: 421 ILEMDSSSSGL-HVLLSNAYAAAGRYEEAAR-MRKMLRDRGV 460



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 174/359 (48%), Gaps = 7/359 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL S  RSR+   G  +H+ + +  L+   ++ ++LI+LYSK      + ++F     K+
Sbjct: 31  LLLSFTRSRSLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDET-PKK 89

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
              +WSS+IS++      + A+  F  ML  G  P+++ + +  +AC       +G  ++
Sbjct: 90  SSTTWSSVISAFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKACGFLRRSDVGKSVH 149

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
              +K GY+  DV VG +L+DM+ K   ++  A  +FD+M E+N V W+ MI    QL  
Sbjct: 150 CLAVKTGYY-CDVFVGSSLVDMYAKCG-EIGDARHLFDEMPERNVVSWSGMIYGYAQLDD 207

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ LF   ++     + FT S V+  CS       GK +H   ++        VG +
Sbjct: 208 GVEALTLFKQALIEDVDVNDFTFSSVIRVCSSSTFLELGKLIHGLCLKMSFDSSSFVGSA 267

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+ +Y+KC   G ++ + +VFD +   N+  W +++    Q     +    LF +M    
Sbjct: 268 LISLYSKC---GVIEGAYQVFDEIPTRNLGLWNSMLIACAQH-AHTQRVFGLFEEMGNVG 323

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           + PN   F SVL AC +        + ++     G   +     SL+ +  R+G++++A
Sbjct: 324 MKPNFIXFLSVLYACSHAGLVEKGREYFSLMRDYGIEPETEHYASLVDLLGRAGKLQEA 382



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 93/294 (31%), Positives = 147/294 (50%), Gaps = 7/294 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD   Y    K+C   R   +GK VH L  ++    +  + +SL+ +Y+KCG+
Sbjct: 117 MLNDGVRPDDHIYPSATKACGFLRRSDVGKSVHCLAVKTGYYCDVFVGSSLVDMYAKCGE 176

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A  +F  M  +R++VSWS MI  Y      V+A+ +F + L      N++ FS+VIR
Sbjct: 177 IGDARHLFDEM-PERNVVSWSGMIYGYAQLDDGVEALTLFKQALIEDVDVNDFTFSSVIR 235

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
            CS++  + +G +I+G  LK   FDS   VG ALI ++ K  V +E AY+VFD++  +N 
Sbjct: 236 VCSSSTFLELGKLIHGLCLKMS-FDSSSFVGSALISLYSKCGV-IEGAYQVFDEIPTRNL 293

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
             W  M+  C Q    +    LF +M   G  P+      V+ ACS   L   G++  S 
Sbjct: 294 GLWNSMLIACAQHAHTQRVFGLFEEMGNVGMKPNFIXFLSVLYACSHAGLVEKGREYFSL 353

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS-WTAIITG 361
               G+  +     SLVD+  +    G + ++  V  +M      S W A++TG
Sbjct: 354 MRDYGIEPETEHYASLVDLLGRA---GKLQEAVSVIKQMPMRPTESVWGALLTG 404



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/160 (26%), Positives = 83/160 (51%), Gaps = 6/160 (3%)

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           ++ +G Q+HA I+K G ++   + + LI++YS+      + QVF E   ++  +W+S+I+
Sbjct: 40  SLRQGLQLHAHILKFGLQTIPLVSHNLINLYSKTQLPLFSLQVFDETPKKSSTTWSSVIS 99

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI--SEGWKHFRSMYDEHG 621
            FA++     AL+ F +ML DG++P+   Y +   AC   G +  S+  K    +  + G
Sbjct: 100 AFAQNEAPLLALQFFRRMLNDGVRPDDHIYPSATKAC---GFLRRSDVGKSVHCLAVKTG 156

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
               +   + +VD+  + G + +A      MP   +V+ W
Sbjct: 157 YYCDVFVGSSLVDMYAKCGEIGDARHLFDEMP-ERNVVSW 195


>gi|302788234|ref|XP_002975886.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
 gi|300156162|gb|EFJ22791.1| hypothetical protein SELMODRAFT_104103 [Selaginella moellendorffii]
          Length = 679

 Score =  439 bits (1130), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 254/686 (37%), Positives = 383/686 (55%), Gaps = 16/686 (2%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           F+++++ C  + ++  G  I+  ++  G    D+ +G  LI M+ K    +E A  VF+K
Sbjct: 3   FASLLQQCGRSRSLPEGRRIHAEIVDTG-LGKDLFLGNHLIQMYGKCGA-MEEARAVFEK 60

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           +   N   W+++I  C   G  R A+ L+  M   G   D   L   VSACS L     G
Sbjct: 61  IESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHG 120

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTAIITG 361
           + L +     G  L   V  SL++MY K    GS+D++RK F  M  D +V+SWTA+I+G
Sbjct: 121 RALEARITSMGFHLHPVVWNSLLNMYCKA---GSIDNARKFFQDMAGDQSVVSWTAMISG 177

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL--KACGNLLDSNVAEQVYTHAVKRGR 419
           +   G  D  A+  F  M+   V PN  TF S+L  +AC NL  + +A     H +    
Sbjct: 178 FALHGCEDL-ALDFFRKMVAEGVRPNEVTFVSILALEACSNL--NLLAAGKKLHELILDA 234

Query: 420 ALDDC-VGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELL 477
            LD   V NSL++MY + G +++AR+ FE   + +NL++++TM+ AY+ N +  +A  L 
Sbjct: 235 GLDSSIVRNSLLNMYGKCGGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLY 294

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
            +++  G+    YTF SLL   S  G  + +G  +H R+   G E    +  ALI+MY R
Sbjct: 295 KKMDLEGLEPDEYTFTSLLDACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGR 354

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
              +E A +VF++M   N+++WT++I  FA+HG    A+++ ++M  +G++ + I +++V
Sbjct: 355 YGQLEDALRVFEKMNHWNLVAWTALIAAFAQHG-NVHAIDLSWRMHLEGVQADNIVFLSV 413

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L ACSHA ++  G   F+ M  + G+     HY+CMVDLL R G + EA E + SMP   
Sbjct: 414 LHACSHAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEP 473

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
             +  +T L ACRV GDT  G   A +     P D A ++L+S+ YA+   W+ VA +++
Sbjct: 474 AHMEMKTLLAACRVSGDTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVQE 533

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETS-HPKTLEIYAELDQLALKIKEFGYLPDTN 775
           RM +  + K  G S +E  N+VH+F  G  S H +  EI  EL +L   +KE GY+PDT 
Sbjct: 534 RMAKLGVKKPRGWSCVEVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEGGYIPDTG 593

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
            + H LEE+ K   L  HSE++A+AFGL+      PI V KNLRVC DCH   K IS   
Sbjct: 594 QIGHRLEEDGKEDLLALHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSV 653

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
           GR IV+RD+ RFH  ++G CSC DYW
Sbjct: 654 GRRIVVRDAYRFHRFENGTCSCGDYW 679



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 239/479 (49%), Gaps = 19/479 (3%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
            ++ LL+ C RSR+   G+ +H+ +  + L  +  + N LI +Y KCG + EA  +F+ +
Sbjct: 2   AFASLLQQCGRSRSLPEGRRIHAEIVDTGLGKDLFLGNHLIQMYGKCGAMEEARAVFEKI 61

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
               +I SWS +I + V+ G    A+ ++  M   G   +       + ACS+  ++  G
Sbjct: 62  -ESPNIFSWSIIIGACVDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHG 120

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMT-EKNTVGWTLMITR 257
             +   +   G+    V V  +L++M+ K GS+D  +A K F  M  +++ V WT MI+ 
Sbjct: 121 RALEARITSMGFHLHPV-VWNSLLNMYCKAGSID--NARKFFQDMAGDQSVVSWTAMISG 177

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS--ACSELELFTSGKQLHSWAIRTGLA 315
               GC   A+  F  M+  G  P+  T   +++  ACS L L  +GK+LH   +  GL 
Sbjct: 178 FALHGCEDLALDFFRKMVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLD 237

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVK 374
             + V  SL++MY KC   G +D++R+VF+R  D  N+++W+ +I  Y  +G   ++A+ 
Sbjct: 238 SSI-VRNSLLNMYGKC---GGLDEARRVFERCGDCRNLITWSTMIAAYSLNGD-GRQALS 292

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISM 432
           L+  M    + P+ +TF S+L AC ++    + E    H     + L+    +  +LI+M
Sbjct: 293 LYKKMDLEGLEPDEYTFTSLLDAC-SIAGDTLTEGRALHRRLEAKGLEKKMVLATALINM 351

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y R G++EDA + FE +   NLV++  ++ A+A++ N   A +L   +   GV      F
Sbjct: 352 YGRYGQLEDALRVFEKMNHWNLVAWTALIAAFAQHGNVH-AIDLSWRMHLEGVQADNIVF 410

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            S+L   S    +  G      ++   G       Y+ ++ + +RC  V  A ++   M
Sbjct: 411 LSVLHACSHAVVLEAGLSCFQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSM 469



 Score =  160 bits (406), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 216/420 (51%), Gaps = 22/420 (5%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +++G  ++A+     M  +G   D+      + +C    +   G+ + + +T      + 
Sbjct: 77  VDNGLARRALELYHWMDHEGVRLDMVVLINPVSACSSLGSLDHGRALEARITSMGFHLHP 136

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           V+ NSL+++Y K G ++ A K F+ M   + +VSW++MIS +   G +  A+  F +M+ 
Sbjct: 137 VVWNSLLNMYCKAGSIDNARKFFQDMAGDQSVVSWTAMISGFALHGCEDLALDFFRKMVA 196

Query: 174 LGFCPNEYCFSAV--IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            G  PNE  F ++  + ACSN   +A G  ++  +L  G  DS + V  +L++M+ K   
Sbjct: 197 EGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAG-LDSSI-VRNSLLNMYGKCG- 253

Query: 232 DLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
            L+ A +VF++  + +N + W+ MI   +  G  R A+ L+  M L G  PD +T + ++
Sbjct: 254 GLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSLL 313

Query: 291 SACS-ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
            ACS   +  T G+ LH      GL   + +  +L++MY +    G ++D+ +VF++M  
Sbjct: 314 DACSIAGDTLTEGRALHRRLEAKGLEKKMVLATALINMYGRY---GQLEDALRVFEKMNH 370

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVA 407
            N+++WTA+I  + Q G  +  A+ L   M    V  ++  F SVL AC +  +L++ ++
Sbjct: 371 WNLVAWTALIAAFAQHG--NVHAIDLSWRMHLEGVQADNIVFLSVLHACSHAVVLEAGLS 428

Query: 408 ---EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
              E V    V+ G A   C    ++ + AR GR+ +A +   S+ FE   +   T++ A
Sbjct: 429 CFQEMVADFGVRGGAAHYSC----MVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAA 484



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 95/329 (28%), Positives = 163/329 (49%), Gaps = 22/329 (6%)

Query: 69  MTQKGNHPDLDTYS--LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           M  +G  P+  T+   L L++C        GK +H L+  + L+ +S++ NSL+++Y KC
Sbjct: 194 MVAEGVRPNEVTFVSILALEACSNLNLLAAGKKLHELILDAGLD-SSIVRNSLLNMYGKC 252

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G L+EA ++F+  G+ R++++WS+MI++Y   G    A+ ++ +M   G  P+EY F+++
Sbjct: 253 GGLDEARRVFERCGDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLEPDEYTFTSL 312

Query: 187 IRACS-NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           + ACS   + +  G  ++  L   G  +  + +  ALI+M+ +    LE A +VF+KM  
Sbjct: 313 LDACSIAGDTLTEGRALHRRLEAKG-LEKKMVLATALINMYGRYG-QLEDALRVFEKMNH 370

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG--- 302
            N V WT +I    Q G    AI L   M L G   D      V+ ACS   +  +G   
Sbjct: 371 WNLVAWTALIAAFAQHGNVH-AIDLSWRMHLEGVQADNIVFLSVLHACSHAVVLEAGLSC 429

Query: 303 --KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAII 359
             + +  + +R G A   C    +VD+ A+C   G V ++ ++   M  +   M    ++
Sbjct: 430 FQEMVADFGVRGGAAHYSC----MVDLLARC---GRVAEAEELLHSMPFEPAHMEMKTLL 482

Query: 360 TGYVQSGG--RDKEAVKLFSDMIQGQVAP 386
                SG   R     +L S +I    AP
Sbjct: 483 AACRVSGDTPRGARVARLASGLIPHDAAP 511


>gi|77553706|gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
 gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group]
 gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 218/597 (36%), Positives = 353/597 (59%), Gaps = 10/597 (1%)

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           ++ +R+  D+I      D FTL  ++  C++      GK  H  AI  GL  D      L
Sbjct: 44  KNLVRVERDLI------DVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNIL 97

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           +++Y KC   G  D +R+VFD M   +++SW  +I GY  +   D EA+KLFS M +   
Sbjct: 98  INLYTKC---GQNDCARRVFDAMSVRSIISWNTMIAGYTHNR-EDVEALKLFSRMHREGT 153

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
               FT +S L AC         +Q++T A+K        VG + + +YA+   ++DA  
Sbjct: 154 QMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFLDVYAKCNMIKDACW 213

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            FE++ EK  V+++++   + +N   E+   L    +  G+  + +T +S+LS  +S+  
Sbjct: 214 VFENMPEKTSVTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLAL 273

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           I +G Q+HA I+K GF  N  +  +L+ +Y++C  +E +++VF +ME++NV+ W +MI  
Sbjct: 274 IIEGTQVHAVIVKHGFHRNLFVATSLVDVYAKCGQIEKSYEVFADMEEKNVVLWNAMIAS 333

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           F++H  +  A+ +F KM   GI PN +TY+++LSACSH GL+ EG  +F  +  +     
Sbjct: 334 FSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVEEGRHYFNLLLSDRTAEP 393

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
            + HY+CMVD+LGRSG   EA + +  MP      +W + LG+ R+H +  L + AAE +
Sbjct: 394 NVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLARIAAEQL 453

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
              +P++   H+LLSN+YA++G+WE V   RK +++    KE G SWIEA  K+H F  G
Sbjct: 454 FRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKIHVFVAG 513

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           E  HP   ++Y +L+++  ++++  +  +T   LH++  +QK + L  HSEK+A AFGLI
Sbjct: 514 EREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLAFAFGLI 573

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           S   + PI ++KNLR+CGDCH+ +K +S +T R++++RD NRFHH KDG CSC D+W
Sbjct: 574 SLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCGDFW 630



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 200/407 (49%), Gaps = 49/407 (12%)

Query: 78  LDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           +D ++L  LL+ C + R+  +GK  H L     L  ++V  N LI+LY+KCG  + A ++
Sbjct: 54  IDVFTLHELLQLCAKRRSLLVGKSCHGLAIHFGLVTDTVTCNILINLYTKCGQNDCARRV 113

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F +M + R I+SW++MI+ Y +  + V+A+ +F  M   G    E+  S+ + AC+    
Sbjct: 114 FDAM-SVRSIISWNTMIAGYTHNREDVEALKLFSRMHREGTQMTEFTLSSTLCACAAKYA 172

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +     ++   +K    DS   VG A +D++ K ++ ++ A  VF+ M EK +V W+ + 
Sbjct: 173 IIECKQLHTIAIKLA-LDSSSFVGTAFLDVYAKCNM-IKDACWVFENMPEKTSVTWSSLF 230

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               Q G   + + LF      G     FT+S ++S C+ L L   G Q+H+  ++ G  
Sbjct: 231 AGFVQNGLHEEVLCLFQSTQREGMQLTEFTVSSILSTCASLALIIEGTQVHAVIVKHGFH 290

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            ++ V  SLVD+YAKC   G ++ S +VF  M + NV+ W A+I  + +      EA+ L
Sbjct: 291 RNLFVATSLVDVYAKC---GQIEKSYEVFADMEEKNVVLWNAMIASFSRH-AHSWEAMIL 346

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  M Q  + PN  T+ S+L AC                                   + 
Sbjct: 347 FEKMQQVGIFPNEVTYLSILSAC-----------------------------------SH 371

Query: 436 SGRMEDARKAFESLF-----EKNLVSYNTMVDAYAKNLNSEKAFELL 477
           +G +E+ R  F  L      E N++ Y+ MVD   ++  +++A++LL
Sbjct: 372 TGLVEEGRHYFNLLLSDRTAEPNVLHYSCMVDVLGRSGKTDEAWKLL 418



 Score = 99.8 bits (247), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 165/355 (46%), Gaps = 15/355 (4%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+     M ++G      T S  L +C         K +H++  +  L+ +S +  + +
Sbjct: 140 EALKLFSRMHREGTQMTEFTLSSTLCACAAKYAIIECKQLHTIAIKLALDSSSFVGTAFL 199

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
            +Y+KC  + +A  +F++M  K   V+WSS+ + +V  G   + + +F      G    E
Sbjct: 200 DVYAKCNMIKDACWVFENMPEKTS-VTWSSLFAGFVQNGLHEEVLCLFQSTQREGMQLTE 258

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           +  S+++  C++   +  G  ++  ++K G F  ++ V  +L+D++ K    +E +Y+VF
Sbjct: 259 FTVSSILSTCASLALIIEGTQVHAVIVKHG-FHRNLFVATSLVDVYAKCG-QIEKSYEVF 316

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
             M EKN V W  MI   ++     +A+ LF  M   G  P+  T   ++SACS   L  
Sbjct: 317 ADMEEKNVVLWNAMIASFSRHAHSWEAMILFEKMQQVGIFPNEVTYLSILSACSHTGLVE 376

Query: 301 SGKQLHSWAI--RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTA 357
            G+   +  +  RT     +   C +VD+  +    G  D++ K+ D+M  +     W +
Sbjct: 377 EGRHYFNLLLSDRTAEPNVLHYSC-MVDVLGR---SGKTDEAWKLLDKMPFEPTASMWGS 432

Query: 358 II-TGYVQSGGRDKE--AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
           ++ +  +    R     A +LF   ++ +   NH   ++V  A GN  +  VA +
Sbjct: 433 LLGSSRIHKNIRLARIAAEQLFR--LEPENGGNHVLLSNVYAASGNWENVVVARK 485


>gi|357507131|ref|XP_003623854.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498869|gb|AES80072.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 865

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/665 (34%), Positives = 371/665 (55%), Gaps = 39/665 (5%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A ++FD + + +    + +I+  T  G   +AI+++  +   G  PD         
Sbjct: 113 DFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAK 172

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+        K++H  A R G+  DV VG +L+  Y KC     V+ +R+VFD ++  +
Sbjct: 173 ACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCK---CVEGARRVFDDLVVRD 229

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT++ + YV+ G   ++ + +F +M    V PN  T +S+L AC  L D    ++++
Sbjct: 230 VVSWTSLSSCYVKCGF-PRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 288

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             AV+ G  ++  V ++L+S+YA+   + +AR  F+ +  +++VS+N ++ AY KN   E
Sbjct: 289 GFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYE 348

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN-------- 523
           K F L  ++   GV     T+ +++ G    G   +  ++  ++ K GF+ N        
Sbjct: 349 KGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSIL 408

Query: 524 ---------------HCIY------------NALISMYSRCANVEAAFQVFKEMEDRNVI 556
                          HC               AL+ MY++C ++  +  VF  M  ++V+
Sbjct: 409 PACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVV 468

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           +W +MI   A HG    AL +F KML   ++PN +T+  VLS CSH+ L+ EG + F SM
Sbjct: 469 AWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 528

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +H +     HY+C+VD+  R+G L EA +FI+ MP+      W   L ACRV+ + EL
Sbjct: 529 GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVEL 588

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            K +A+ + E +P +P  ++ L N+  +A  W   + +R  MKER + K  GCSW++  N
Sbjct: 589 AKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGN 648

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           KVH F VG+ S+ ++ +IY  LD+L  K+K  GY PDT++VL ++++E+K + L  HSEK
Sbjct: 649 KVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEK 708

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +AVAFG+++ +    IRVFKNLR+CGDCH AIKY+S V G  IV+RDS RFHH K+G CS
Sbjct: 709 LAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCS 768

Query: 857 CNDYW 861
           C D W
Sbjct: 769 CKDLW 773



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 153/579 (26%), Positives = 281/579 (48%), Gaps = 57/579 (9%)

Query: 92  RNFHLGKLVHSLLTRSKLEPNSVILN-------SLISLYSKCGDLNEANKIFKSMGNKRD 144
           + F L      LL+   + P S+  N        LI +    GD N A ++F ++  + D
Sbjct: 70  KRFELSNGAEFLLSTEAMVPPSLPTNIPSHLGLRLIRVALNVGDFNRARQLFDNIP-QPD 128

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
             + S++IS+    G   +AI ++  + E G  P+   F A  +AC+ + +      ++ 
Sbjct: 129 PTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKEVHD 188

Query: 205 FLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCP 264
              +CG   SDV VG ALI  + K    +E A +VFD +  ++ V WT + +   + G P
Sbjct: 189 DATRCGVM-SDVFVGNALIHAYGKCKC-VEGARRVFDDLVVRDVVSWTSLSSCYVKCGFP 246

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           R  + +F +M  SG  P+  T+S ++ AC+EL+   SGK++H +A+R G+ +++ V  +L
Sbjct: 247 RKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMVVNLFVCSAL 306

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS------------------- 365
           V +YAKC    SV ++R VFD M   +V+SW  ++T Y ++                   
Sbjct: 307 VSLYAKCL---SVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGVR 363

Query: 366 ---------------GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
                           GR +EAV++F  M +    PN  T +S+L AC    +  + +++
Sbjct: 364 ADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKEI 423

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + +  +  +  D     +L+ MYA+ G +  +R  F+ +  K++V++NTM+ A A + N 
Sbjct: 424 HCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVVAWNTMIIANAMHGNG 483

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF---ESNHCIY 527
           ++A  L  ++  + V  ++ TF  +LSG S    + +G QI   + +      ++NH  Y
Sbjct: 484 KEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDANH--Y 541

Query: 528 NALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
           + ++ +YSR   +  A++  + M  +    +W +++     +     A +I  K L + I
Sbjct: 542 SCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELA-KISAKKLFE-I 599

Query: 587 KPNGI-TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +PN    Y+++ +    A + SE     R +  E GI +
Sbjct: 600 EPNNPGNYVSLFNILVTAKMWSEA-SQVRILMKERGITK 637



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 242/557 (43%), Gaps = 81/557 (14%)

Query: 40  PTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKL 99
           PTT   L + L  H   G   +AI     + ++G  PD+  +    K+C  S +    K 
Sbjct: 129 PTTCSTLISALTTH---GLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE 185

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           VH   TR  +  +  + N+LI  Y KC  +  A ++F  +   RD+VSW+S+ S YV  G
Sbjct: 186 VHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDLV-VRDVVSWTSLSSCYVKCG 244

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
                + +F EM   G  PN    S+++ AC+  +++  G  I+GF ++ G    ++ V 
Sbjct: 245 FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMV-VNLFVC 303

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR---------------------- 257
            AL+ ++ K  + +  A  VFD M  ++ V W  ++T                       
Sbjct: 304 SALVSLYAK-CLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGV 362

Query: 258 -------------CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
                        C + G   +A+ +F  M   GF P+  T+S ++ ACS  E    GK+
Sbjct: 363 RADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKE 422

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H +  R     D+    +L+ MYAKC   G ++ SR VFD M   +V++W  +I     
Sbjct: 423 IHCYVFRHWKVGDLTSTTALLYMYAKC---GDLNLSRNVFDMMRRKDVVAWNTMIIANAM 479

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT-----HAVKRGR 419
            G   KEA+ LF  M+  +V PN  TF  VL  C +        Q++      H V+   
Sbjct: 480 HGN-GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDA 538

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKA---FE 475
               CV    + +Y+R+GR+ +A K  + +  E    ++  ++ A     N E A    +
Sbjct: 539 NHYSCV----VDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAK 594

Query: 476 LLHEIEDTGVGTSAYTF-----ASLLSGASSIGAIGK---------------GEQIHARI 515
            L EIE    G     F     A + S AS +  + K               G ++H  +
Sbjct: 595 KLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 654

Query: 516 I--KSGFESNHCIYNAL 530
           +  KS  ES+  IYN L
Sbjct: 655 VGDKSNIESDK-IYNFL 670



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/253 (26%), Positives = 124/253 (49%), Gaps = 2/253 (0%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G  LI +    G    AR+ F+++ + +  + +T++ A   +  S +A ++   +++ G
Sbjct: 100 LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 159

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +      F +     +  G   + +++H    + G  S+  + NALI  Y +C  VE A 
Sbjct: 160 IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 219

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           +VF ++  R+V+SWTS+ + + K GF  + +++F +M   G+KPN +T  ++L AC+   
Sbjct: 220 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 279

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            +  G K        HG+V  +   + +V L  +  S+ EA      MP   DV+ W   
Sbjct: 280 DLKSG-KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP-HRDVVSWNGV 337

Query: 665 LGACRVHGDTELG 677
           L A   + + E G
Sbjct: 338 LTAYFKNKEYEKG 350


>gi|223948379|gb|ACN28273.1| unknown [Zea mays]
          Length = 648

 Score =  439 bits (1129), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 240/655 (36%), Positives = 371/655 (56%), Gaps = 25/655 (3%)

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPD 282
           M+VK G +DL  A +VF  M ++N V WT ++    + G     +RL  +M   S   P+
Sbjct: 1   MYVKCGELDL--ACEVFGGMRDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPN 58

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            +TLS  + AC  +    +G  +H   +R G      V  SLV +Y+K    G + D+R+
Sbjct: 59  EYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSK---GGRIGDARR 115

Query: 343 VFDRM-LDHNVMSWTAIITGYVQSG-GRDKEAVKLFSDMI--QGQVAPNHFTFASVLKAC 398
           VFD   L   + +W A+++GY  +G GRD  A+ +F +M   +GQ  P+ FTFAS+LKAC
Sbjct: 116 VFDGAGLGSGIATWNAMVSGYAHAGHGRD--ALLVFREMRRHEGQHQPDEFTFASLLKAC 173

Query: 399 GNLLDSNVAEQVYTHAVKRG--RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
             L  +    QV+      G   A +  +  +L+ MY +  R+  A + FE L  KN++ 
Sbjct: 174 SGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCRRLPVAMQVFERLERKNVIQ 233

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +  +V  +A+     +A EL      +G    ++  +S++   +    + +G Q+H   I
Sbjct: 234 WTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGI 293

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           K    ++    N+++ MY +C   + A ++F+EM   NV+SWT+M+ G  KHG    A+ 
Sbjct: 294 KDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVA 353

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F +M A G++P+ +TY+A+LSACSHAGL+ E  ++F  +  +  +  + EHYACMVDLL
Sbjct: 354 LFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEHYACMVDLL 413

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           GR+G L EA + IR+MP+   V VW+T L ACRVH D  +G+ A +++L  D  +P  ++
Sbjct: 414 GRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNPVNYV 473

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG---ETSHPKTLE 753
            LSN+ A AG W     +R  M+ R L K+ GCSW+E   +VH F+ G   E +HP+  +
Sbjct: 474 TLSNVLAEAGEWRECHKVRDAMRRRGLKKQGGCSWVEVGKEVHFFYGGGGEEETHPQAGD 533

Query: 754 IYAELDQLALKIKE-FGY-LPDTNFVLHELEEEQKVQYLFQHSEKIAVAF-----GLIST 806
           I   L  +  +++E  GY   D  F LH+++EE + + L  HSE++AV       G+   
Sbjct: 534 IRRVLRDMETRMREQLGYNADDARFALHDVDEESRAESLRAHSERLAVGLWLLRNGVDGG 593

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              +PIRV+KNLRVCGDCH   K +S V  R +V+RD+NRFH  + G CSC DYW
Sbjct: 594 GHGEPIRVYKNLRVCGDCHEFFKGLSAVVRRALVVRDANRFHRFEHGSCSCKDYW 648



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/405 (29%), Positives = 207/405 (51%), Gaps = 16/405 (3%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++ T     P+  T S  LK+C    +   G  +H L  R+  + + V+ +SL+ +YSK 
Sbjct: 48  EMRTASEAAPNEYTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDVVASSLVLVYSKG 107

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML--ELGFCPNEYCFS 184
           G + +A ++F   G    I +W++M+S Y + G   DA+ +F EM   E    P+E+ F+
Sbjct: 108 GRIGDARRVFDGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFA 167

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFD-SDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           ++++ACS       G  ++  +   G+   S+  +  AL+DM+VK    L  A +VF+++
Sbjct: 168 SLLKACSGLGATREGAQVHAAMTASGFSTASNAILAGALVDMYVK-CRRLPVAMQVFERL 226

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
             KN + WT ++    Q G   +A+ LF     SG  PD   LS VV   ++  L   G+
Sbjct: 227 ERKNVIQWTAVVVGHAQEGQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGR 286

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H + I+     DV  G S+VDMY KC   G  D++ ++F  M   NV+SWT ++ G  
Sbjct: 287 QVHCYGIKDPTGTDVSAGNSIVDMYLKC---GLPDEAERMFREMRAPNVVSWTTMVNGLG 343

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRAL 421
           +  G  +EAV LF +M  G V P+  T+ ++L AC    L+D     + Y   ++R R +
Sbjct: 344 KH-GLGREAVALFEEMRAGGVEPDEVTYLALLSACSHAGLVDEC---RRYFSCIRRDRTV 399

Query: 422 DDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
                +   ++ +  R+G + +AR    ++  E  +  + T++ A
Sbjct: 400 RPKAEHYACMVDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSA 444



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 134/496 (27%), Positives = 236/496 (47%), Gaps = 26/496 (5%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNE 180
           +Y KCG+L+ A ++F  M   R++VSW++++  ++  G     + +  EM       PNE
Sbjct: 1   MYVKCGELDLACEVFGGM-RDRNVVSWTALMVGFLRHGDATGCLRLLGEMRTASEAAPNE 59

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           Y  SA ++AC    + A G  I+G  ++ GY + DV V  +L+ ++ KG   +  A +VF
Sbjct: 60  YTLSASLKACCVVGDTAAGVGIHGLCVRAGYQEHDV-VASSLVLVYSKGG-RIGDARRVF 117

Query: 241 DKMTEKNTVG-WTLMITRCTQLGCPRDAIRLFLDMIL--SGFLPDRFTLSGVVSACSELE 297
           D     + +  W  M++     G  RDA+ +F +M        PD FT + ++ ACS L 
Sbjct: 118 DGAGLGSGIATWNAMVSGYAHAGHGRDALLVFREMRRHEGQHQPDEFTFASLLKACSGLG 177

Query: 298 LFTSGKQLHSWAIRTGL--ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
               G Q+H+    +G   A +  +  +LVDMY KC     +  + +VF+R+   NV+ W
Sbjct: 178 ATREGAQVHAAMTASGFSTASNAILAGALVDMYVKCR---RLPVAMQVFERLERKNVIQW 234

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           TA++ G+ Q  G+  EA++LF    +    P+    +SV+    +        QV+ + +
Sbjct: 235 TAVVVGHAQE-GQVTEALELFRRFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGI 293

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           K     D   GNS++ MY + G  ++A + F  +   N+VS+ TMV+   K+    +A  
Sbjct: 294 KDPTGTDVSAGNSIVDMYLKCGLPDEAERMFREMRAPNVVSWTTMVNGLGKHGLGREAVA 353

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA-----RIIKSGFESNHCIYNAL 530
           L  E+   GV     T+ +LLS  S  G + +  +  +     R ++   E     Y  +
Sbjct: 354 LFEEMRAGGVEPDEVTYLALLSACSHAGLVDECRRYFSCIRRDRTVRPKAEH----YACM 409

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKP 588
           + +  R   +  A  + + M  +  V  W ++++    H   A   E    +LA DG  P
Sbjct: 410 VDLLGRAGELREARDLIRTMPMEPTVGVWQTLLSACRVHKDVAVGREAGDVLLAMDGDNP 469

Query: 589 NGITYIAVLSACSHAG 604
             + Y+ + +  + AG
Sbjct: 470 --VNYVTLSNVLAEAG 483



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 68/258 (26%), Positives = 130/258 (50%), Gaps = 7/258 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNH-PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE- 110
           H   GR    +F  ++   +G H PD  T++ LLK+C        G  VH+ +T S    
Sbjct: 138 HAGHGRDALLVFR-EMRRHEGQHQPDEFTFASLLKACSGLGATREGAQVHAAMTASGFST 196

Query: 111 -PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             N+++  +L+ +Y KC  L  A ++F+ +  +++++ W++++  +   G+  +A+ +F 
Sbjct: 197 ASNAILAGALVDMYVKCRRLPVAMQVFERL-ERKNVIQWTAVVVGHAQEGQVTEALELFR 255

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
                G  P+ +  S+V+   ++   V  G  ++ + +K     +DV  G +++DM++K 
Sbjct: 256 RFWRSGARPDSHVLSSVVGVLADFALVEQGRQVHCYGIK-DPTGTDVSAGNSIVDMYLKC 314

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            +  E A ++F +M   N V WT M+    + G  R+A+ LF +M   G  PD  T   +
Sbjct: 315 GLPDE-AERMFREMRAPNVVSWTTMVNGLGKHGLGREAVALFEEMRAGGVEPDEVTYLAL 373

Query: 290 VSACSELELFTSGKQLHS 307
           +SACS   L    ++  S
Sbjct: 374 LSACSHAGLVDECRRYFS 391


>gi|124360227|gb|ABN08240.1| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 687

 Score =  439 bits (1128), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 232/665 (34%), Positives = 371/665 (55%), Gaps = 39/665 (5%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A ++FD + + +    + +I+  T  G   +AI+++  +   G  PD         
Sbjct: 27  DFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKPDMPVFLAAAK 86

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+        K++H  A R G+  DV VG +L+  Y KC     V+ +R+VFD ++  +
Sbjct: 87  ACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKC---VEGARRVFDDLVVRD 143

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWT++ + YV+ G   ++ + +F +M    V PN  T +S+L AC  L D    ++++
Sbjct: 144 VVSWTSLSSCYVKCG-FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIH 202

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             AV+ G  ++  V ++L+S+YA+   + +AR  F+ +  +++VS+N ++ AY KN   E
Sbjct: 203 GFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYE 262

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN-------- 523
           K F L  ++   GV     T+ +++ G    G   +  ++  ++ K GF+ N        
Sbjct: 263 KGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSIL 322

Query: 524 ---------------HCIY------------NALISMYSRCANVEAAFQVFKEMEDRNVI 556
                          HC               AL+ MY++C ++  +  VF  M  ++V+
Sbjct: 323 PACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRNVFDMMRRKDVV 382

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           +W +MI   A HG    AL +F KML   ++PN +T+  VLS CSH+ L+ EG + F SM
Sbjct: 383 AWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSM 442

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +H +     HY+C+VD+  R+G L EA +FI+ MP+      W   L ACRV+ + EL
Sbjct: 443 GRDHLVEPDANHYSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVEL 502

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
            K +A+ + E +P +P  ++ L N+  +A  W   + +R  MKER + K  GCSW++  N
Sbjct: 503 AKISAKKLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGN 562

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           KVH F VG+ S+ ++ +IY  LD+L  K+K  GY PDT++VL ++++E+K + L  HSEK
Sbjct: 563 KVHTFVVGDKSNIESDKIYNFLDELVEKMKMAGYKPDTDYVLQDIDQEEKAESLCNHSEK 622

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           +AVAFG+++ +    IRVFKNLR+CGDCH AIKY+S V G  IV+RDS RFHH K+G CS
Sbjct: 623 LAVAFGILNLNGQSTIRVFKNLRICGDCHNAIKYMSKVVGVIIVVRDSLRFHHFKNGNCS 682

Query: 857 CNDYW 861
           C D W
Sbjct: 683 CKDLW 687



 Score =  198 bits (503), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 146/545 (26%), Positives = 270/545 (49%), Gaps = 50/545 (9%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           LI +    GD N A ++F ++  + D  + S++IS+    G   +AI ++  + E G  P
Sbjct: 18  LIRVALNVGDFNRARQLFDNIP-QPDPTTCSTLISALTTHGLSNEAIKIYSSLQERGIKP 76

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           +   F A  +AC+ + +      ++    +CG   SDV VG ALI  + K    +E A +
Sbjct: 77  DMPVFLAAAKACAVSGDALRVKEVHDDATRCGVM-SDVFVGNALIHAYGKCKC-VEGARR 134

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           VFD +  ++ V WT + +   + G PR  + +F +M  SG  P+  T+S ++ AC+EL+ 
Sbjct: 135 VFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKD 194

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
             SGK++H +A+R G+ +++ V  +LV +YAKC    SV ++R VFD M   +V+SW  +
Sbjct: 195 LKSGKEIHGFAVRHGMVVNLFVCSALVSLYAKCL---SVREARMVFDLMPHRDVVSWNGV 251

Query: 359 ITGYVQS----------------------------------GGRDKEAVKLFSDMIQGQV 384
           +T Y ++                                   GR +EAV++F  M +   
Sbjct: 252 LTAYFKNKEYEKGFSLFLKMSRDGVRADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGF 311

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
            PN  T +S+L AC    +  + ++++ +  +  +  D     +L+ MYA+ G +  +R 
Sbjct: 312 KPNEITISSILPACSFSENLRMGKEIHCYVFRHWKVGDLTSTTALLYMYAKCGDLNLSRN 371

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F+ +  K++V++NTM+ A A + N ++A  L  ++  + V  ++ TF  +LSG S    
Sbjct: 372 VFDMMRRKDVVAWNTMIIANAMHGNGKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRL 431

Query: 505 IGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTS 560
           + +G QI   + +      ++NH  Y+ ++ +YSR   +  A++  + M  +    +W +
Sbjct: 432 VEEGVQIFNSMGRDHLVEPDANH--YSCVVDIYSRAGRLNEAYKFIQGMPMEPTASAWGA 489

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLSACSHAGLISEGWKHFRSMYDE 619
           ++     +     A +I  K L + I+PN    Y+++ +    A + SE     R +  E
Sbjct: 490 LLAACRVYKNVELA-KISAKKLFE-IEPNNPGNYVSLFNILVTAKMWSEA-SQVRILMKE 546

Query: 620 HGIVQ 624
            GI +
Sbjct: 547 RGITK 551



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 151/557 (27%), Positives = 242/557 (43%), Gaps = 81/557 (14%)

Query: 40  PTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKL 99
           PTT   L + L  H   G   +AI     + ++G  PD+  +    K+C  S +    K 
Sbjct: 43  PTTCSTLISALTTH---GLSNEAIKIYSSLQERGIKPDMPVFLAAAKACAVSGDALRVKE 99

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           VH   TR  +  +  + N+LI  Y KC  +  A ++F  +   RD+VSW+S+ S YV  G
Sbjct: 100 VHDDATRCGVMSDVFVGNALIHAYGKCKCVEGARRVFDDL-VVRDVVSWTSLSSCYVKCG 158

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
                + +F EM   G  PN    S+++ AC+  +++  G  I+GF ++ G    ++ V 
Sbjct: 159 FPRKGMDVFREMGWSGVKPNPMTVSSILPACAELKDLKSGKEIHGFAVRHGMV-VNLFVC 217

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR---------------------- 257
            AL+ ++ K  + +  A  VFD M  ++ V W  ++T                       
Sbjct: 218 SALVSLYAK-CLSVREARMVFDLMPHRDVVSWNGVLTAYFKNKEYEKGFSLFLKMSRDGV 276

Query: 258 -------------CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
                        C + G   +A+ +F  M   GF P+  T+S ++ ACS  E    GK+
Sbjct: 277 RADEATWNAVIGGCMENGRSEEAVEMFRKMQKMGFKPNEITISSILPACSFSENLRMGKE 336

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H +  R     D+    +L+ MYAKC   G ++ SR VFD M   +V++W  +I     
Sbjct: 337 IHCYVFRHWKVGDLTSTTALLYMYAKC---GDLNLSRNVFDMMRRKDVVAWNTMIIANAM 393

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT-----HAVKRGR 419
            G   KEA+ LF  M+  +V PN  TF  VL  C +        Q++      H V+   
Sbjct: 394 HGN-GKEALFLFDKMLLSRVQPNSVTFTGVLSGCSHSRLVEEGVQIFNSMGRDHLVEPDA 452

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKA---FE 475
               CV    + +Y+R+GR+ +A K  + +  E    ++  ++ A     N E A    +
Sbjct: 453 NHYSCV----VDIYSRAGRLNEAYKFIQGMPMEPTASAWGALLAACRVYKNVELAKISAK 508

Query: 476 LLHEIEDTGVGTSAYTF-----ASLLSGASSIGAIGK---------------GEQIHARI 515
            L EIE    G     F     A + S AS +  + K               G ++H  +
Sbjct: 509 KLFEIEPNNPGNYVSLFNILVTAKMWSEASQVRILMKERGITKTPGCSWLQVGNKVHTFV 568

Query: 516 I--KSGFESNHCIYNAL 530
           +  KS  ES+  IYN L
Sbjct: 569 VGDKSNIESDK-IYNFL 584



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/243 (26%), Positives = 120/243 (49%), Gaps = 2/243 (0%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G  LI +    G    AR+ F+++ + +  + +T++ A   +  S +A ++   +++ G
Sbjct: 14  LGLRLIRVALNVGDFNRARQLFDNIPQPDPTTCSTLISALTTHGLSNEAIKIYSSLQERG 73

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +      F +     +  G   + +++H    + G  S+  + NALI  Y +C  VE A 
Sbjct: 74  IKPDMPVFLAAAKACAVSGDALRVKEVHDDATRCGVMSDVFVGNALIHAYGKCKCVEGAR 133

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
           +VF ++  R+V+SWTS+ + + K GF  + +++F +M   G+KPN +T  ++L AC+   
Sbjct: 134 RVFDDLVVRDVVSWTSLSSCYVKCGFPRKGMDVFREMGWSGVKPNPMTVSSILPACAELK 193

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            +  G K        HG+V  +   + +V L  +  S+ EA      MP   DV+ W   
Sbjct: 194 DLKSG-KEIHGFAVRHGMVVNLFVCSALVSLYAKCLSVREARMVFDLMP-HRDVVSWNGV 251

Query: 665 LGA 667
           L A
Sbjct: 252 LTA 254


>gi|147790932|emb|CAN77232.1| hypothetical protein VITISV_001089 [Vitis vinifera]
          Length = 575

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 221/558 (39%), Positives = 332/558 (59%), Gaps = 36/558 (6%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G +D S  +F R  + +V  WTAII G+   G   ++A+  ++ M+   V PN FTF+S+
Sbjct: 23  GRLDYSVALFGRTQNPSVFFWTAIIHGHALRG-LHEQALNFYAQMLTQGVEPNAFTFSSI 81

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           LK C         + +++ AVK G   D  V   L+ +YAR G +  A++ F+++ EK+L
Sbjct: 82  LKLC----PIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPEKSL 137

Query: 455 VS-------------------------------YNTMVDAYAKNLNSEKAFELLHEIEDT 483
           VS                               +N M+D Y +N    +A  L   +   
Sbjct: 138 VSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRMLKA 197

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
               +  T  S+LS    +GA+  G  +H+ I  +G + N  +  AL+ MYS+C ++E A
Sbjct: 198 KAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFNVHVGTALVDMYSKCGSLEDA 257

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
             VF +++D++V++W SMI G+A  GF+  AL++F  M   G+ P  IT+I +LSAC H+
Sbjct: 258 RLVFDKIDDKDVVAWNSMIVGYAMXGFSQEALQLFKSMCRMGLHPTNITFIGILSACGHS 317

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           G ++EGW  F  M DE+GI  ++EHY CMV+LLGR+G + +A E +++M +  D ++W T
Sbjct: 318 GWVTEGWDIFNKMKDEYGIEPKIEHYGCMVNLLGRAGHVEQAYELVKNMNIEPDPVLWGT 377

Query: 664 FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
            LGACR+HG   LG+   E++++Q+  +   +ILLSN+YA+ G+W+ VA +R  MK+  +
Sbjct: 378 LLGACRLHGKIALGEKIVELLVDQNLANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGV 437

Query: 724 IKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEE 783
            KE GCS IE +NKVH+F  G  +HPK  EIY  L+++   +K  GY P T+ VLH++ E
Sbjct: 438 KKEPGCSSIEVNNKVHEFLAGGLNHPKRKEIYMMLEEINGWLKSHGYTPQTDIVLHDIGE 497

Query: 784 EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRD 843
            +K + L  HSEK+A+AFGLI+T     I++ KNLRVC DCH   K IS +TGR+IV+RD
Sbjct: 498 TEKERSLEVHSEKLAIAFGLINTQPGTTIKIVKNLRVCADCHEVTKLISKITGRKIVVRD 557

Query: 844 SNRFHHIKDGKCSCNDYW 861
            NRFHH  +G CSC DYW
Sbjct: 558 RNRFHHFVNGSCSCGDYW 575



 Score =  172 bits (436), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 224/478 (46%), Gaps = 74/478 (15%)

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
           K  P  V L+ L   Y+  G L+ +  +F    N   +  W+++I  +  RG    A++ 
Sbjct: 4   KKPPAXVPLDKLQRSYASLGRLDYSVALFGRTQNP-SVFFWTAIIHGHALRGLHEQALNF 62

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           + +ML  G  PN + FS++++ C     +  G  ++   +K G FDSD+ V   L+D++ 
Sbjct: 63  YAQMLTQGVEPNAFTFSSILKLCP----IEPGKALHSQAVKLG-FDSDLYVRTGLLDVYA 117

Query: 228 KGS------------------------------VDLESAYKVFDKMTEKNTVGWTLMITR 257
           +G                                +L++A  +FD M E++ V W +MI  
Sbjct: 118 RGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDG 177

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
            TQ G P +A+ LF  M+ +   P+  T+  V+SAC +L    SG+ +HS+    G+  +
Sbjct: 178 YTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN 237

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V VG +LVDMY+KC   GS++D+R VFD++ D +V++W ++I GY    G  +EA++LF 
Sbjct: 238 VHVGTALVDMYSKC---GSLEDARLVFDKIDDKDVVAWNSMIVGYAMX-GFSQEALQLFK 293

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M +  + P + TF  +L ACG           ++  V  G  + +              
Sbjct: 294 SMCRMGLHPTNITFIGILSACG-----------HSGWVTEGWDIFN-------------- 328

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           +M+D     E   E  +  Y  MV+   +  + E+A+EL   +++  +      + +LL 
Sbjct: 329 KMKD-----EYGIEPKIEHYGCMVNLLGRAGHVEQAYEL---VKNMNIEPDPVLWGTLLG 380

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
                G I  GE+I   ++     +N   Y  L ++Y+   N +   ++   M+D  V
Sbjct: 381 ACRLHGKIALGEKIVELLVDQNL-ANSGTYILLSNIYAAVGNWDGVARLRTMMKDSGV 437



 Score =  104 bits (260), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 79/274 (28%), Positives = 121/274 (44%), Gaps = 39/274 (14%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           Q   F   ++TQ G  P+  T+S +LK C        GK +HS   +   + +  +   L
Sbjct: 58  QALNFYAQMLTQ-GVEPNAFTFSSILKLC----PIEPGKALHSQAVKLGFDSDLYVRTGL 112

Query: 120 ISLYSKCGDLNEANKIFKSMGNK------------------------------RDIVSWS 149
           + +Y++ GD+  A ++F +M  K                              RD V W+
Sbjct: 113 LDVYARGGDVVSAQQLFDTMPEKSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWN 172

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
            MI  Y   G   +A+ +F  ML+    PNE    +V+ AC     +  G  ++ ++   
Sbjct: 173 VMIDGYTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENN 232

Query: 210 GYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
           G    +V VG AL+DM+ K GS  LE A  VFDK+ +K+ V W  MI      G  ++A+
Sbjct: 233 G-IQFNVHVGTALVDMYSKCGS--LEDARLVFDKIDDKDVVAWNSMIVGYAMXGFSQEAL 289

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           +LF  M   G  P   T  G++SAC      T G
Sbjct: 290 QLFKSMCRMGLHPTNITFIGILSACGHSGWVTEG 323



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 71/265 (26%), Positives = 127/265 (47%), Gaps = 39/265 (14%)

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA  GR++ +   F      ++  +  ++  +A     E+A     ++   GV  +A+TF
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +S+L     +  I  G+ +H++ +K GF+S+  +   L+ +Y+R  +V +A Q+F  M +
Sbjct: 79  SSIL----KLCPIEPGKALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMPE 134

Query: 553 RNVISWTSMITGFAKHGF--AAR-----------------------------ALEIFYKM 581
           ++++S T+M+T +AKHG   AAR                             AL +F +M
Sbjct: 135 KSLVSLTAMLTCYAKHGELDAARVLFDGMEERDGVCWNVMIDGYTQNGMPNEALVLFRRM 194

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           L    KPN +T ++VLSAC   G +  G W H  S  + +GI   +     +VD+  + G
Sbjct: 195 LKAKAKPNEVTVLSVLSACGQLGALESGRWVH--SYIENNGIQFNVHVGTALVDMYSKCG 252

Query: 641 SLTEALEFIRSMPLSADVLVWRTFL 665
           SL +A   +       DV+ W + +
Sbjct: 253 SLEDA-RLVFDKIDDKDVVAWNSMI 276



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 56/214 (26%), Positives = 98/214 (45%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G   +A+     M +    P+  T   +L +C +      G+ VHS +  + ++ N
Sbjct: 178 YTQNGMPNEALVLFRRMLKAKAKPNEVTVLSVLSACGQLGALESGRWVHSYIENNGIQFN 237

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +L+ +YSKCG L +A  +F  + +K D+V+W+SMI  Y   G   +A+ +F  M 
Sbjct: 238 VHVGTALVDMYSKCGSLEDARLVFDKIDDK-DVVAWNSMIVGYAMXGFSQEALQLFKSMC 296

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDM 225
            +G  P    F  ++ AC ++  V  G  I       YG   K  ++      GC +  +
Sbjct: 297 RMGLHPTNITFIGILSACGHSGWVTEGWDIFNKMKDEYGIEPKIEHY------GCMVNLL 350

Query: 226 FVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
              G V  E AY++   M  E + V W  ++  C
Sbjct: 351 GRAGHV--EQAYELVKNMNIEPDPVLWGTLLGAC 382



 Score = 53.1 bits (126), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 38/156 (24%), Positives = 72/156 (46%), Gaps = 8/156 (5%)

Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
           Y+    ++ +  +F   ++ +V  WT++I G A  G   +AL  + +ML  G++PN  T+
Sbjct: 19  YASLGRLDYSVALFGRTQNPSVFFWTAIIHGHALRGLHEQALNFYAQMLTQGVEPNAFTF 78

Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
            ++L  C     I  G K   S   + G    +     ++D+  R G +  A +   +MP
Sbjct: 79  SSILKLCP----IEPG-KALHSQAVKLGFDSDLYVRTGLLDVYARGGDVVSAQQLFDTMP 133

Query: 654 LSADVLVWRTFLGACRV-HGDTELGKHAAEMILEQD 688
             +  LV  T +  C   HG+ +  +   + + E+D
Sbjct: 134 EKS--LVSLTAMLTCYAKHGELDAARVLFDGMEERD 167


>gi|15235537|ref|NP_195454.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
 gi|75213666|sp|Q9SZT8.1|PP354_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g37380, chloroplastic; Flags: Precursor
 gi|4468804|emb|CAB38205.1| putative protein [Arabidopsis thaliana]
 gi|7270720|emb|CAB80403.1| putative protein [Arabidopsis thaliana]
 gi|332661386|gb|AEE86786.1| Tetratricopeptide repeat (TPR)-like superfamily protein
           [Arabidopsis thaliana]
          Length = 632

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 226/591 (38%), Positives = 346/591 (58%), Gaps = 38/591 (6%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+  +R  L L        + ++      G +  S  +F + +D ++  +TA I    
Sbjct: 47  QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
            +G +D +A  L+  ++  ++ PN FTF+S+LK+C     +   + ++TH +K G  +D 
Sbjct: 107 INGLKD-QAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDP 161

Query: 424 CVGNSL-------------------------------ISMYARSGRMEDARKAFESLFEK 452
            V   L                               I+ YA+ G +E AR  F+S+ E+
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQI 511
           ++VS+N M+D YA++     A  L  ++   G       T  + LS  S IGA+  G  I
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H  +  S    N  +   LI MYS+C ++E A  VF +   +++++W +MI G+A HG++
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYS 341

Query: 572 ARALEIFYKMLA-DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             AL +F +M    G++P  IT+I  L AC+HAGL++EG + F SM  E+GI  ++EHY 
Sbjct: 342 QDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYG 401

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           C+V LLGR+G L  A E I++M + AD ++W + LG+C++HGD  LGK  AE ++  + +
Sbjct: 402 CLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK 461

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
           +   ++LLSN+YAS G +E VA +R  MKE+ ++KE G S IE +NKVH+F  G+  H K
Sbjct: 462 NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSK 521

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           + EIY  L +++ +IK  GY+P+TN VL +LEE +K Q L  HSE++A+A+GLIST    
Sbjct: 522 SKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGS 581

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           P+++FKNLRVC DCHT  K IS +TGR+IV+RD NRFHH  DG CSC D+W
Sbjct: 582 PLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 122/504 (24%), Positives = 224/504 (44%), Gaps = 95/504 (18%)

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILN-SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
             H   L H+LL    L P   +LN  L   Y+  G +  +  +F    +  D+  +++ 
Sbjct: 47  QIHAAILRHNLL----LHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDP-DLFLFTAA 101

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           I++    G +  A  ++V++L     PNE+ FS+++++CS       G +I+  +LK G 
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFG- 156

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK------------------------- 246
              D  V   L+D++ KG  D+ SA KVFD+M E+                         
Sbjct: 157 LGIDPYVATGLVDVYAKGG-DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALF 215

Query: 247 ------NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF-LPDRFTLSGVVSACSELELF 299
                 + V W +MI    Q G P DA+ LF  ++  G   PD  T+   +SACS++   
Sbjct: 216 DSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL 275

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
            +G+ +H +   + + L+V V   L+DMY+KC   GS++++  VF+     ++++W A+I
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC---GSLEEAVLVFNDTPRKDIVAWNAMI 332

Query: 360 TGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
            GY    G  ++A++LF++M QG   + P   TF   L+AC                   
Sbjct: 333 AGYAMH-GYSQDALRLFNEM-QGITGLQPTDITFIGTLQAC------------------- 371

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEK 472
                           A +G + +  + FES+      +  +  Y  +V    +    ++
Sbjct: 372 ----------------AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A+E    I++  +   +  ++S+L      G    G++I   +I    + N  IY  L +
Sbjct: 416 AYE---TIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK-NSGIYVLLSN 471

Query: 533 MYSRCANVEAAFQVFKEMEDRNVI 556
           +Y+   + E   +V   M+++ ++
Sbjct: 472 IYASVGDYEGVAKVRNLMKEKGIV 495



 Score = 75.9 bits (185), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           L+ +    PD  T    L +C +      G+ +H  +  S++  N  +   LI +YSKCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAV 186
            L EA  +F     ++DIV+W++MI+ Y   G   DA+ +F EM  + G  P +  F   
Sbjct: 309 SLEEAVLVFNDT-PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367

Query: 187 IRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
           ++AC++   V  G  I       YG   K  ++      GC L+ +  +    L+ AY+ 
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY------GC-LVSLLGRAG-QLKRAYET 419

Query: 240 FDKMT-EKNTVGWTLMITRC 258
              M  + ++V W+ ++  C
Sbjct: 420 IKNMNMDADSVLWSSVLGSC 439


>gi|30688521|ref|NP_850342.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|18491267|gb|AAL69458.1| At2g41080/T3K9.15 [Arabidopsis thaliana]
 gi|330254831|gb|AEC09925.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 565

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/539 (40%), Positives = 335/539 (62%), Gaps = 5/539 (0%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L++ Y +    G + ++RKVFD M D  + +W A+I G +Q    ++E + LF +M    
Sbjct: 31  LINGYVRA---GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFE-FNEEGLSLFREMHGLG 86

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
            +P+ +T  SV      L   ++ +Q++ + +K G  LD  V +SL  MY R+G+++D  
Sbjct: 87  FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
               S+  +NLV++NT++   A+N   E    L   ++ +G   +  TF ++LS  S + 
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
             G+G+QIHA  IK G  S   + ++LISMYS+C  +  A + F E ED + + W+SMI+
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266

Query: 564 GFAKHGFAARALEIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            +  HG    A+E+F  M     ++ N + ++ +L ACSH+GL  +G + F  M +++G 
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              ++HY C+VDLLGR+G L +A   IRSMP+  D+++W+T L AC +H + E+ +   +
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 386

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            IL+ DP D A ++LL+N++ASA  W  V+ +RK M+++N+ KEAG SW E   +VH+F 
Sbjct: 387 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 446

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
           +G+ S  K+ EIY+ L +L L++K  GY PDT  VLH+++EE+K   L QHSEK+AVAF 
Sbjct: 447 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFA 506

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           L+   +  PIR+ KNLRVC DCH A KYIS++  REI LRD +RFHH  +GKCSC DYW
Sbjct: 507 LMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/391 (29%), Positives = 197/391 (50%), Gaps = 15/391 (3%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +YG + K  Y  S++     LI+ +V+   DL +A KVFD+M ++    W  MI    Q 
Sbjct: 16  VYGRMRKKNYMSSNI-----LINGYVRAG-DLVNARKVFDEMPDRKLTTWNAMIAGLIQF 69

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
               + + LF +M   GF PD +TL  V S  + L   + G+Q+H + I+ GL LD+ V 
Sbjct: 70  EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVN 129

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SL  MY +   +G + D   V   M   N+++W  +I G  Q+G  +   + L+  M  
Sbjct: 130 SSLAHMYMR---NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET-VLYLYKMMKI 185

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
               PN  TF +VL +C +L      +Q++  A+K G +    V +SLISMY++ G + D
Sbjct: 186 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGD 245

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-EDTGVGTSAYTFASLLSGAS 500
           A KAF    +++ V +++M+ AY  +   ++A EL + + E T +  +   F +LL   S
Sbjct: 246 AAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACS 305

Query: 501 SIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISW 558
             G   KG ++   ++ K GF+     Y  ++ +  R   ++ A  + + M  + +++ W
Sbjct: 306 HSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIW 365

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPN 589
            ++++    H  A  A  +F ++L   I PN
Sbjct: 366 KTLLSACNIHKNAEMAQRVFKEILQ--IDPN 394



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 190/371 (51%), Gaps = 18/371 (4%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI+ Y + GDL  A K+F  M + R + +W++MI+  +      + + +F EM  LGF
Sbjct: 29  NILINGYVRAGDLVNARKVFDEMPD-RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 87

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+EY   +V    +   +V+IG  I+G+ +K G  + D+ V  +L  M+++    L+  
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMRNG-KLQDG 145

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             V   M  +N V W  +I    Q GCP   + L+  M +SG  P++ T   V+S+CS+L
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            +   G+Q+H+ AI+ G +  V V  SL+ MY+KC   G + D+ K F    D + + W+
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC---GCLGDAAKAFSEREDEDEVMWS 262

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGN--LLDSNVA---EQV 410
           ++I+ Y   G  D EA++LF+ M  Q  +  N   F ++L AC +  L D  +      V
Sbjct: 263 SMISAYGFHGQGD-EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 321

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN 469
             +  K G     CV    + +  R+G ++ A     S+  + ++V + T++ A   + N
Sbjct: 322 EKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 377

Query: 470 SEKAFELLHEI 480
           +E A  +  EI
Sbjct: 378 AEMAQRVFKEI 388



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 2/277 (0%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI+ Y R+G + +ARK F+ + ++ L ++N M+    +   +E+   L  E+   G  
Sbjct: 29  NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 88

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              YT  S+ SG++ + ++  G+QIH   IK G E +  + ++L  MY R   ++    V
Sbjct: 89  PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 148

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            + M  RN+++W ++I G A++G     L ++  M   G +PN IT++ VLS+CS   + 
Sbjct: 149 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 208

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            +G +   +   + G    +   + ++ +  + G L +A +   S     D ++W + + 
Sbjct: 209 GQG-QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMIS 266

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           A   HG  +        + EQ   +      L+ LYA
Sbjct: 267 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 303



 Score = 66.6 bits (161), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 20/322 (6%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD  T   +       R+  +G+ +H    +  LE + V+ +SL  +Y + G L + 
Sbjct: 86  GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 145

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
             + +SM   R++V+W+++I      G     ++++  M   G  PN+  F  V+ +CS+
Sbjct: 146 EIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                 G  I+   +K G       V  +LI M+ K    L  A K F +  +++ V W+
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVA-VVSSLISMYSKCGC-LGDAAKAFSEREDEDEVMWS 262

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQL-----H 306
            MI+     G   +AI LF  M     +  +      ++ ACS   L   G +L      
Sbjct: 263 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 322

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQS 365
            +  + GL    CV    VD+  +    G +D +  +   M +  +++ W  +++     
Sbjct: 323 KYGFKPGLKHYTCV----VDLLGRA---GCLDQAEAIIRSMPIKTDIVIWKTLLSA-CNI 374

Query: 366 GGRDKEAVKLFSDMIQGQVAPN 387
               + A ++F +++  Q+ PN
Sbjct: 375 HKNAEMAQRVFKEIL--QIDPN 394



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 80/170 (47%), Gaps = 6/170 (3%)

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           +S  S +G       ++ R+ K  + S+    N LI+ Y R  ++  A +VF EM DR +
Sbjct: 1   MSMYSKLGDFPSAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMPDRKL 56

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
            +W +MI G  +  F    L +F +M   G  P+  T  +V S  +    +S G +    
Sbjct: 57  TTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG-QQIHG 115

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
              ++G+   +   + +  +  R+G L +    IRSMP+  +++ W T +
Sbjct: 116 YTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 164



 Score = 60.8 bits (146), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 12/227 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSC----IRSRNFHLGKLVHSLLTRSKLE 110
            +G  +  ++   +M   G  P+  T+  +L SC    IR +    G+ +H+   +    
Sbjct: 169 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ----GQQIHAEAIKIGAS 224

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
               +++SLIS+YSKCG L +A K F S     D V WSSMIS+Y   G+  +AI +F  
Sbjct: 225 SVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 283

Query: 171 MLE-LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           M E      NE  F  ++ ACS++     G  ++  +++   F   +     ++D+  + 
Sbjct: 284 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 343

Query: 230 SVDLESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
              L+ A  +   M  K + V W  +++ C        A R+F +++
Sbjct: 344 GC-LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 389


>gi|147766033|emb|CAN70212.1| hypothetical protein VITISV_038740 [Vitis vinifera]
          Length = 724

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 225/566 (39%), Positives = 354/566 (62%), Gaps = 9/566 (1%)

Query: 272 LDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD--VCVGCSLVDMY 328
           LD+I  G L PD    S ++  C+ L     G+ +H+  + +   LD  + +   +V+MY
Sbjct: 75  LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHF-LDNHLVLQNIIVNMY 133

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           AKC   G +DD+R++FD M   ++++WTA+I G+ Q+  R ++A+ LF  M++  + PNH
Sbjct: 134 AKC---GCLDDARRMFDEMPTKDMVTWTALIAGFSQNN-RPRDALLLFPQMLRLGLQPNH 189

Query: 389 FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFES 448
           FT +S+LKA G+    +   Q++   +K G      VG++L+ MYAR G M+ A+ AF+ 
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARCGHMDAAQLAFDG 249

Query: 449 LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
           +  K+ VS+N ++  +A+    E A  LL +++      + +T++S+ S  +SIGA+ +G
Sbjct: 250 MPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQG 309

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           + +HA +IKSG +    I N L+ MY++  +++ A +VF  +   +V+SW +M+TG A+H
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH 628
           G     L+ F +ML  GI+PN I+++ VL+ACSH+GL+ EG  +F  M  ++ +   + H
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELM-KKYKVEPDVPH 428

Query: 629 YACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           Y   VDLLGR G L  A  FIR MP+     VW   LGACR+H + ELG +AAE   E D
Sbjct: 429 YVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYAAERAFELD 488

Query: 689 PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSH 748
           P D    +LLSN+YASAG W  VA +RK MKE  + K+  CSW+E +N VH F   + +H
Sbjct: 489 PHDSGPRMLLSNIYASAGRWRDVAKVRKMMKESGVKKQPACSWVEIENAVHLFVANDETH 548

Query: 749 PKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSK 808
           P+  EI  + ++++ KIKE GY+PDT+ VL  ++++++ + L  HSEK+A+AF L++T  
Sbjct: 549 PQIKEIRGKWEEISGKIKEIGYVPDTSHVLLFVDQQEREEKLQYHSEKLALAFALLNTPT 608

Query: 809 SKPIRVFKNLRVCGDCHTAIKYISMV 834
             PIR+ KN+RVCGDCH AIK++S +
Sbjct: 609 GSPIRIKKNIRVCGDCHAAIKFVSKI 634



 Score =  221 bits (562), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/427 (32%), Positives = 229/427 (53%), Gaps = 22/427 (5%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLI 120
            ++ LDL+ +    PD + YS LLK C R      G++VH+ L  S    N ++L N ++
Sbjct: 71  GLYALDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIV 130

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           ++Y+KCG L++A ++F  M  K D+V+W+++I+ +    +  DA+ +F +ML LG  PN 
Sbjct: 131 NMYAKCGCLDDARRMFDEMPTK-DMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNH 189

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           +  S++++A  +   +  G  ++ F LK GY  S V VG AL+DM+ +    +++A   F
Sbjct: 190 FTLSSLLKASGSEHGLDPGTQLHAFCLKYGY-QSSVYVGSALVDMYARCG-HMDAAQLAF 247

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D M  K+ V W  +I+   + G    A+ L   M    F P  FT S V SAC+ +    
Sbjct: 248 DGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALE 307

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            GK +H+  I++GL L   +G +L+DMYAK    GS+DD+++VFDR++  +V+SW  ++T
Sbjct: 308 QGKWVHAHMIKSGLKLIAFIGNTLLDMYAKA---GSIDDAKRVFDRLVKPDVVSWNTMLT 364

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRG 418
           G  Q  G  KE +  F  M++  + PN  +F  VL AC +  LLD  +    Y   +K+ 
Sbjct: 365 GCAQH-GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGL---YYFELMKKY 420

Query: 419 RALDDCVGN-SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN----- 469
           +   D     + + +  R G ++ A +    +  E     +  ++ A    KN+      
Sbjct: 421 KVEPDVPHYVTFVDLLGRVGLLDRAERFIREMPIEPTAAVWGALLGACRMHKNMELGVYA 480

Query: 470 SEKAFEL 476
           +E+AFEL
Sbjct: 481 AERAFEL 487



 Score =  192 bits (488), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 204/383 (53%), Gaps = 6/383 (1%)

Query: 169 VEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           +++++ G   P+   +S +++ C+    V  G I++  L+   + D+ + +   +++M+ 
Sbjct: 75  LDLIQRGSLVPDYNLYSKLLKECTRLGKVEQGRIVHAHLVDSHFLDNHLVLQNIIVNMYA 134

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
           K    L+ A ++FD+M  K+ V WT +I   +Q   PRDA+ LF  M+  G  P+ FTLS
Sbjct: 135 KCGC-LDDARRMFDEMPTKDMVTWTALIAGFSQNNRPRDALLLFPQMLRLGLQPNHFTLS 193

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            ++ A         G QLH++ ++ G    V VG +LVDMYA+C   G +D ++  FD M
Sbjct: 194 SLLKASGSEHGLDPGTQLHAFCLKYGYQSSVYVGSALVDMYARC---GHMDAAQLAFDGM 250

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              + +SW A+I+G+ +  G  + A+ L   M +    P HFT++SV  AC ++      
Sbjct: 251 PTKSEVSWNALISGHARK-GEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGALEQG 309

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           + V+ H +K G  L   +GN+L+ MYA++G ++DA++ F+ L + ++VS+NTM+   A++
Sbjct: 310 KWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRLVKPDVVSWNTMLTGCAQH 369

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              ++  +   ++   G+  +  +F  +L+  S  G + +G      + K   E +   Y
Sbjct: 370 GLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEGLYYFELMKKYKVEPDVPHY 429

Query: 528 NALISMYSRCANVEAAFQVFKEM 550
              + +  R   ++ A +  +EM
Sbjct: 430 VTFVDLLGRVGLLDRAERFIREM 452



 Score = 90.9 bits (224), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 65/225 (28%), Positives = 110/225 (48%), Gaps = 5/225 (2%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   PT SE   N LI  H   G  + A+  L  M +K   P   TYS +  +C      
Sbjct: 247 FDGMPTKSEVSWNALISGHARKGEGEHALHLLWKMQRKNFQPTHFTYSSVFSACASIGAL 306

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             GK VH+ + +S L+  + I N+L+ +Y+K G +++A ++F  +  K D+VSW++M++ 
Sbjct: 307 EQGKWVHAHMIKSGLKLIAFIGNTLLDMYAKAGSIDDAKRVFDRL-VKPDVVSWNTMLTG 365

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
               G   + +  F +ML +G  PNE  F  V+ ACS++  +  G + Y  L+K    + 
Sbjct: 366 CAQHGLGKETLDRFEQMLRIGIEPNEISFLCVLTACSHSGLLDEG-LYYFELMKKYKVEP 424

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
           DV      +D+  +  + L+ A +   +M  E     W  ++  C
Sbjct: 425 DVPHYVTFVDLLGRVGL-LDRAERFIREMPIEPTAAVWGALLGAC 468


>gi|297733830|emb|CBI15077.3| unnamed protein product [Vitis vinifera]
          Length = 804

 Score =  438 bits (1127), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 266/796 (33%), Positives = 427/796 (53%), Gaps = 54/796 (6%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P   T+  LLK   +  +    K +H+ +    L  N+ +L  LI  Y  C +L+ A  +
Sbjct: 53  PSHSTFVQLLK---KRPSLTQIKQIHAQVVTHGLAQNTSLLGPLIHSYIGCRNLSFARIV 109

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG--FCPNEYCFSAVIRACSNT 193
           F    +    + W+ MI +Y       +++++F +ML  G     ++Y F+ V  ACS  
Sbjct: 110 FDQFPSLPPTIIWNLMIQAYSKTPSSQESLYLFHQMLAHGRPTSADKYTFTFVFTACSRH 169

Query: 194 ENV-AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
             +   G  ++G ++K GY +SD+ VG +L++M+   S  +  A +VFD+M +++ + WT
Sbjct: 170 PTLRGYGENVHGMVVKDGY-ESDIFVGNSLVNMYSIFS-RMVDAKRVFDEMPQRDVITWT 227

Query: 253 LMITRCTQLG-CPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAI 310
            ++      G    +A++ F DM+    + P+   L  ++SAC+ L     GK +H +  
Sbjct: 228 SVVKGYAMRGEFYNEALQCFNDMLCHDEVKPNEAVLVSILSACAHLGALDQGKWIHVYID 287

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           +  + L   +  +L+DMYAKC   G +D +R+VFD +   ++++WT++I+G +   G   
Sbjct: 288 KNRILLSSNISTALIDMYAKC---GRIDCARRVFDGLHKRDLLTWTSMISG-LSMHGLGA 343

Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA--VKRGRALDDCVGNS 428
           E +  FS+M+     P+  T   VL  C +   S + E+   H   VK G   +  VGNS
Sbjct: 344 ECLWTFSEMLAEGFKPDDITLLGVLNGCSH---SGLVEEEIVHGMVVKSGFESNLYVGNS 400

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL--HEIEDTGVG 486
           +I+M +   RMEDARK F  + E+++ S+ +++  YAK+   ++A      + + D  V 
Sbjct: 401 VINMCSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTFFCNMLCDDRVN 460

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
            +      +LS  + +GA+ +G  IH  I K G   +  I  ALI MY++C  ++ A +V
Sbjct: 461 PNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCGRIDCASRV 520

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  +  R+V+S+TSMI+G + HG    AL              G + +A           
Sbjct: 521 FNGICKRDVLSFTSMISGLSYHGLGKDALR-------------GSSILA----------- 556

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
                   +M    GI  ++EHY C +DLLGR+G L  ALE +++MP+  D+++WR  L 
Sbjct: 557 --------NMESLWGIAPKIEHYGCYIDLLGRAGYLERALEVVKTMPMEPDIVIWRALLS 608

Query: 667 ACRVHGDTELGKHAAEMILEQDPQD-PAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
           A R+H +  LG+     I +    D     +LLSNLYAS G WE V  +RK M +R    
Sbjct: 609 ASRIHHNVNLGEQIISHIGQLKSSDHNGGEVLLSNLYASLGRWERVTEMRKLMVDRRSES 668

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
             GCSWIE +  VH+F V +  HP+ +EI  +L+++  ++ + GY  +T  V  +L EE+
Sbjct: 669 SPGCSWIEVNGLVHEFRVADQLHPQIVEIRNKLNEILKRLSQIGYSANTMQVSFDLNEEE 728

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           K Q +  HSEK+A+AFGL+ST     IR+ KNLR C DCH+A+K IS V GREIV+RD +
Sbjct: 729 KEQAVAWHSEKLAIAFGLMSTEPGTLIRIVKNLRTCEDCHSALKTISQVYGREIVVRDRS 788

Query: 846 RFHHIKDGKCSCNDYW 861
           RFH   +G CSC D+W
Sbjct: 789 RFHTFIEGDCSCKDFW 804



 Score =  187 bits (475), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 139/552 (25%), Positives = 267/552 (48%), Gaps = 63/552 (11%)

Query: 27  NLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK 86
           +LPP+     + Q  +  P S   +Y          +F   L   +    D  T++ +  
Sbjct: 115 SLPPTIIWNLMIQAYSKTPSSQESLY----------LFHQMLAHGRPTSADKYTFTFVFT 164

Query: 87  SCIRSRNFH-LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDI 145
           +C R       G+ VH ++ +   E +  + NSL+++YS    + +A ++F  M  +RD+
Sbjct: 165 ACSRHPTLRGYGENVHGMVVKDGYESDIFVGNSLVNMYSIFSRMVDAKRVFDEM-PQRDV 223

Query: 146 VSWSSMISSYVNRGK-QVDAIHMFVEMLELGFC-----PNEYCFSAVIRACSNTENVAIG 199
           ++W+S++  Y  RG+   +A+  F +ML    C     PNE    +++ AC++   +  G
Sbjct: 224 ITWTSVVKGYAMRGEFYNEALQCFNDML----CHDEVKPNEAVLVSILSACAHLGALDQG 279

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
             I+ ++ K     S   +  ALIDM+ K G +D   A +VFD + +++ + WT MI+  
Sbjct: 280 KWIHVYIDKNRILLSS-NISTALIDMYAKCGRID--CARRVFDGLHKRDLLTWTSMISGL 336

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           +  G   + +  F +M+  GF PD  TL GV++ CS   L    + +H   +++G   ++
Sbjct: 337 SMHGLGAECLWTFSEMLAEGFKPDDITLLGVLNGCSHSGLVEE-EIVHGMVVKSGFESNL 395

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            VG S+++M   C+V   ++D+RKVF++M + +V SWT+++ GY + G  D+ ++  F +
Sbjct: 396 YVGNSVINM---CSVFARMEDARKVFNQMSERDVFSWTSLLGGYAKHGEMDRASLTFFCN 452

Query: 379 MI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           M+   +V PN      VL AC +L   +    ++ +  K G      +  +LI MYA+ G
Sbjct: 453 MLCDDRVNPNEAVLVCVLSACAHLGALDQGNWIHLYIDKIGIRQSSNISTALIDMYAKCG 512

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           R++ A + F  + +++++S+ +M+   + +                G+G  A   +S+L+
Sbjct: 513 RIDCASRVFNGICKRDVLSFTSMISGLSYH----------------GLGKDALRGSSILA 556

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
              S+  I               +  H  Y   I +  R   +E A +V K M  + +++
Sbjct: 557 NMESLWGIAP-------------KIEH--YGCYIDLLGRAGYLERALEVVKTMPMEPDIV 601

Query: 557 SWTSMITGFAKH 568
            W ++++    H
Sbjct: 602 IWRALLSASRIH 613


>gi|3402709|gb|AAD12003.1| hypothetical protein [Arabidopsis thaliana]
          Length = 563

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 217/539 (40%), Positives = 335/539 (62%), Gaps = 5/539 (0%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L++ Y +    G + ++RKVFD M D  + +W A+I G +Q    ++E + LF +M    
Sbjct: 29  LINGYVRA---GDLVNARKVFDEMPDRKLTTWNAMIAGLIQFE-FNEEGLSLFREMHGLG 84

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
            +P+ +T  SV      L   ++ +Q++ + +K G  LD  V +SL  MY R+G+++D  
Sbjct: 85  FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGE 144

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
               S+  +NLV++NT++   A+N   E    L   ++ +G   +  TF ++LS  S + 
Sbjct: 145 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 204

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
             G+G+QIHA  IK G  S   + ++LISMYS+C  +  A + F E ED + + W+SMI+
Sbjct: 205 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 264

Query: 564 GFAKHGFAARALEIFYKMLAD-GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            +  HG    A+E+F  M     ++ N + ++ +L ACSH+GL  +G + F  M +++G 
Sbjct: 265 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 324

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              ++HY C+VDLLGR+G L +A   IRSMP+  D+++W+T L AC +H + E+ +   +
Sbjct: 325 KPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFK 384

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            IL+ DP D A ++LL+N++ASA  W  V+ +RK M+++N+ KEAG SW E   +VH+F 
Sbjct: 385 EILQIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 444

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
           +G+ S  K+ EIY+ L +L L++K  GY PDT  VLH+++EE+K   L QHSEK+AVAF 
Sbjct: 445 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFA 504

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           L+   +  PIR+ KNLRVC DCH A KYIS++  REI LRD +RFHH  +GKCSC DYW
Sbjct: 505 LMILPEGAPIRIIKNLRVCSDCHVAFKYISVIKNREITLRDGSRFHHFINGKCSCGDYW 563



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 203/405 (50%), Gaps = 16/405 (3%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +YG + K  Y  S++     LI+ +V+   DL +A KVFD+M ++    W  MI    Q 
Sbjct: 14  VYGRMRKKNYMSSNI-----LINGYVRAG-DLVNARKVFDEMPDRKLTTWNAMIAGLIQF 67

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
               + + LF +M   GF PD +TL  V S  + L   + G+Q+H + I+ GL LD+ V 
Sbjct: 68  EFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVN 127

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SL  MY +   +G + D   V   M   N+++W  +I G  Q+G  +   + L+  M  
Sbjct: 128 SSLAHMYMR---NGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPET-VLYLYKMMKI 183

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
               PN  TF +VL +C +L      +Q++  A+K G +    V +SLISMY++ G + D
Sbjct: 184 SGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGD 243

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-EDTGVGTSAYTFASLLSGAS 500
           A KAF    +++ V +++M+ AY  +   ++A EL + + E T +  +   F +LL   S
Sbjct: 244 AAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACS 303

Query: 501 SIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISW 558
             G   KG ++   ++ K GF+     Y  ++ +  R   ++ A  + + M  + +++ W
Sbjct: 304 HSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIRSMPIKTDIVIW 363

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            ++++    H  A  A  +F ++L   I PN  +   VL A  HA
Sbjct: 364 KTLLSACNIHKNAEMAQRVFKEILQ--IDPND-SACYVLLANVHA 405



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 112/371 (30%), Positives = 190/371 (51%), Gaps = 18/371 (4%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI+ Y + GDL  A K+F  M + R + +W++MI+  +      + + +F EM  LGF
Sbjct: 27  NILINGYVRAGDLVNARKVFDEMPD-RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGF 85

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+EY   +V    +   +V+IG  I+G+ +K G  + D+ V  +L  M+++    L+  
Sbjct: 86  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMRNG-KLQDG 143

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             V   M  +N V W  +I    Q GCP   + L+  M +SG  P++ T   V+S+CS+L
Sbjct: 144 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 203

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            +   G+Q+H+ AI+ G +  V V  SL+ MY+KC   G + D+ K F    D + + W+
Sbjct: 204 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC---GCLGDAAKAFSEREDEDEVMWS 260

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGN--LLDSNVA---EQV 410
           ++I+ Y   G  D EA++LF+ M  Q  +  N   F ++L AC +  L D  +      V
Sbjct: 261 SMISAYGFHGQGD-EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMV 319

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN 469
             +  K G     CV    + +  R+G ++ A     S+  + ++V + T++ A   + N
Sbjct: 320 EKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKN 375

Query: 470 SEKAFELLHEI 480
           +E A  +  EI
Sbjct: 376 AEMAQRVFKEI 386



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 135/277 (48%), Gaps = 2/277 (0%)

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N LI+ Y R+G + +ARK F+ + ++ L ++N M+    +   +E+   L  E+   G  
Sbjct: 27  NILINGYVRAGDLVNARKVFDEMPDRKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFS 86

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              YT  S+ SG++ + ++  G+QIH   IK G E +  + ++L  MY R   ++    V
Sbjct: 87  PDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIV 146

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
            + M  RN+++W ++I G A++G     L ++  M   G +PN IT++ VLS+CS   + 
Sbjct: 147 IRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIR 206

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            +G +   +   + G    +   + ++ +  + G L +A +   S     D ++W + + 
Sbjct: 207 GQG-QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMIS 264

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
           A   HG  +        + EQ   +      L+ LYA
Sbjct: 265 AYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYA 301



 Score = 66.6 bits (161), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 74/322 (22%), Positives = 139/322 (43%), Gaps = 20/322 (6%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD  T   +       R+  +G+ +H    +  LE + V+ +SL  +Y + G L + 
Sbjct: 84  GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYTIKYGLELDLVVNSSLAHMYMRNGKLQDG 143

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
             + +SM   R++V+W+++I      G     ++++  M   G  PN+  F  V+ +CS+
Sbjct: 144 EIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 202

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                 G  I+   +K G       V  +LI M+ K    L  A K F +  +++ V W+
Sbjct: 203 LAIRGQGQQIHAEAIKIGASSVVA-VVSSLISMYSKCGC-LGDAAKAFSEREDEDEVMWS 260

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQL-----H 306
            MI+     G   +AI LF  M     +  +      ++ ACS   L   G +L      
Sbjct: 261 SMISAYGFHGQGDEAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVE 320

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQS 365
            +  + GL    CV    VD+  +    G +D +  +   M +  +++ W  +++     
Sbjct: 321 KYGFKPGLKHYTCV----VDLLGRA---GCLDQAEAIIRSMPIKTDIVIWKTLLSA-CNI 372

Query: 366 GGRDKEAVKLFSDMIQGQVAPN 387
               + A ++F +++  Q+ PN
Sbjct: 373 HKNAEMAQRVFKEIL--QIDPN 392



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 43/166 (25%), Positives = 78/166 (46%), Gaps = 6/166 (3%)

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           S +G       ++ R+ K  + S+    N LI+ Y R  ++  A +VF EM DR + +W 
Sbjct: 3   SKLGDFPSAVAVYGRMRKKNYMSS----NILINGYVRAGDLVNARKVFDEMPDRKLTTWN 58

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G  +  F    L +F +M   G  P+  T  +V S  +    +S G +       +
Sbjct: 59  AMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG-QQIHGYTIK 117

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           +G+   +   + +  +  R+G L +    IRSMP+  +++ W T +
Sbjct: 118 YGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 162



 Score = 60.5 bits (145), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 58/223 (26%), Positives = 103/223 (46%), Gaps = 4/223 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  +  ++   +M   G  P+  T+  +L SC        G+ +H+   +        
Sbjct: 167 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 226

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE- 173
           +++SLIS+YSKCG L +A K F S     D V WSSMIS+Y   G+  +AI +F  M E 
Sbjct: 227 VVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQ 285

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
                NE  F  ++ ACS++     G  ++  +++   F   +     ++D+  +    L
Sbjct: 286 TNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC-L 344

Query: 234 ESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           + A  +   M  K + V W  +++ C        A R+F +++
Sbjct: 345 DQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 387


>gi|225457243|ref|XP_002281020.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 580

 Score =  438 bits (1126), Expect = e-120,   Method: Compositional matrix adjust.
 Identities = 223/580 (38%), Positives = 352/580 (60%), Gaps = 5/580 (0%)

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D+ +L   +  C+ +      K + +  +R  L  D  +   L++  A  T+ G V  + 
Sbjct: 6   DQGSLVAAIKRCTRVGDL---KAIQAHMVRANLTQDTFLTSKLIESSA-VTLSGHVAYAH 61

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
           ++F      N+  W  II GY  S      A+ L+ DM    ++PN +TF  VLKAC  L
Sbjct: 62  RIFSCTHHPNLFMWNTIIRGYSISDS-PITAIALYRDMFLCGISPNSYTFGFVLKACCKL 120

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
           L     +++++  VK G   +  + N LI +YA  G M+ A   F+ + E +  S++TMV
Sbjct: 121 LRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYACVMFDEMPEPDSASWSTMV 180

Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
             YA+N  + +A +L  E++   V + A+T AS++     +GA+  G+ +H+ + K G +
Sbjct: 181 SGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVK 240

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
            +  +  AL+ MYS+C +++ A +VF+ M +R+V +W++MI G+A HG   +AL++F  M
Sbjct: 241 IDVVLGTALVGMYSKCGSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEKALQLFDAM 300

Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
                 PN +T+ +VLSACSH+GL+ +G + F +M+ E+ I  +++HY CMVDL  R+G 
Sbjct: 301 KRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGM 360

Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
           +  A +FI++MP+  +V++WRT LGAC+ HG  +LG+H +  IL+ DP  P  ++L+SN+
Sbjct: 361 VGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNV 420

Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
           YAS G W  V  +R  MK++   K+ G S IE +  VHKF +G+ SHP+  +IY  L Q+
Sbjct: 421 YASLGRWSSVCQVRSLMKDKAPKKQHGWSSIEINFMVHKFIMGDESHPEREKIYGMLHQM 480

Query: 762 ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVC 821
           A K+K+ G++  T  VLH+++EE+K   L  HSE++A+A+GL+ T    PIR+ KNLRVC
Sbjct: 481 ARKLKQVGHVNSTVDVLHDIDEEEKEYALGLHSERLAIAYGLLHTPNGSPIRIVKNLRVC 540

Query: 822 GDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            DCH  IK IS V  REI++RD  RFHH ++  CSCNDYW
Sbjct: 541 RDCHEVIKLISEVYNREIIVRDRVRFHHFRERGCSCNDYW 580



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 130/506 (25%), Positives = 234/506 (46%), Gaps = 59/506 (11%)

Query: 76  PDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI--SLYSKCGDLNE 131
           P LD  SL+  +K C R  +    K + + + R+ L  ++ + + LI  S  +  G +  
Sbjct: 3   PMLDQGSLVAAIKRCTRVGDL---KAIQAHMVRANLTQDTFLTSKLIESSAVTLSGHVAY 59

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A++IF S  +  ++  W+++I  Y      + AI ++ +M   G  PN Y F  V++AC 
Sbjct: 60  AHRIF-SCTHHPNLFMWNTIIRGYSISDSPITAIALYRDMFLCGISPNSYTFGFVLKACC 118

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
               +  G  ++  ++K G  D +  +   LI ++      ++ A  +FD+M E ++  W
Sbjct: 119 KLLRLCEGQELHSQIVKVG-LDFETPLVNGLIKLYAACGC-MDYACVMFDEMPEPDSASW 176

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
           + M++   Q G   +A++LF +M       D FTL+ VV  C +L     GK +HS+  +
Sbjct: 177 STMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDK 236

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            G+ +DV +G +LV MY+KC   GS+D++ KVF  M + +V +W+ +I GY   G  +K 
Sbjct: 237 EGVKIDVVLGTALVGMYSKC---GSLDNALKVFQGMAERDVTAWSTMIAGYAIHGHGEK- 292

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           A++LF  M + +  PN  TF SVL AC                                 
Sbjct: 293 ALQLFDAMKRSKTIPNCVTFTSVLSAC--------------------------------- 319

Query: 432 MYARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
             + SG +E   + FE+++ +  ++     Y  MVD + +      A +    I+   + 
Sbjct: 320 --SHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGMVGHAHKF---IQTMPIE 374

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES--NHCIYNALISMYSRCANVEAAF 544
            +   + +LL    + G    GE I  +I+K    S  N+ + + + +   R ++V    
Sbjct: 375 PNVVLWRTLLGACKTHGYKDLGEHISRKILKLDPSSPENYVLVSNVYASLGRWSSVCQVR 434

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGF 570
            + K+   +    W+S+   F  H F
Sbjct: 435 SLMKDKAPKKQHGWSSIEINFMVHKF 460



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 87/301 (28%), Positives = 149/301 (49%), Gaps = 12/301 (3%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  P+  T+  +LK+C +      G+ +HS + +  L+  + ++N LI LY+ CG ++ A
Sbjct: 102 GISPNSYTFGFVLKACCKLLRLCEGQELHSQIVKVGLDFETPLVNGLIKLYAACGCMDYA 161

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
             +F  M  + D  SWS+M+S Y   G+ V+A+ +F EM       + +  ++V+  C +
Sbjct: 162 CVMFDEM-PEPDSASWSTMVSGYAQNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGD 220

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGW 251
              + +G  ++ ++ K G    DV +G AL+ M+ K GS+D  +A KVF  M E++   W
Sbjct: 221 LGALDLGKWVHSYMDKEG-VKIDVVLGTALVGMYSKCGSLD--NALKVFQGMAERDVTAW 277

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS--WA 309
           + MI      G    A++LF  M  S  +P+  T + V+SACS   L   G Q+    W 
Sbjct: 278 STMIAGYAIHGHGEKALQLFDAMKRSKTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWT 337

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGR 368
                      GC +VD++ +    G V  + K    M ++ NV+ W  ++      G +
Sbjct: 338 EYKITPQIKHYGC-MVDLFCRA---GMVGHAHKFIQTMPIEPNVVLWRTLLGACKTHGYK 393

Query: 369 D 369
           D
Sbjct: 394 D 394



 Score = 85.9 bits (211), Expect = 9e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 101/209 (48%), Gaps = 3/209 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+  +A+     M  +    D  T + ++  C       LGK VHS + +  ++ + V
Sbjct: 185 QNGQAVEALKLFREMQAENVSSDAFTLASVVGVCGDLGALDLGKWVHSYMDKEGVKIDVV 244

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +L+ +YSKCG L+ A K+F+ M  +RD+ +WS+MI+ Y   G    A+ +F  M   
Sbjct: 245 LGTALVGMYSKCGSLDNALKVFQGMA-ERDVTAWSTMIAGYAIHGHGEKALQLFDAMKRS 303

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
              PN   F++V+ ACS++  V  GH I+  +         +     ++D+F +  + + 
Sbjct: 304 KTIPNCVTFTSVLSACSHSGLVEKGHQIFETMWTEYKITPQIKHYGCMVDLFCRAGM-VG 362

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
            A+K    M  E N V W  ++  C   G
Sbjct: 363 HAHKFIQTMPIEPNVVLWRTLLGACKTHG 391


>gi|356544234|ref|XP_003540559.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Glycine max]
          Length = 916

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/724 (32%), Positives = 408/724 (56%), Gaps = 11/724 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H      ++A+     M++ G      T + +L +       + G LVH+   +   E +
Sbjct: 192 HAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQGFESS 251

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + +SLI++Y KC   ++A ++F ++  K  IV W++M+  Y   G   + + +F++M+
Sbjct: 252 IYVASSLINMYGKCQMPDDARQVFDAISQKNMIV-WNAMLGVYSQNGFLSNVMELFLDMI 310

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+E+ +++++  C+  E + +G  ++  ++K   F S++ V  ALIDM+ K    
Sbjct: 311 SCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIK-KRFTSNLFVNNALIDMYAKAGA- 368

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A K F+ MT ++ + W  +I    Q      A  LF  MIL G +PD  +L+ ++SA
Sbjct: 369 LKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDEVSLASILSA 428

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C  +++  +G+Q H  +++ GL  ++  G SL+DMY+KC   G + D+ K +  M + +V
Sbjct: 429 CGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKC---GDIKDAHKTYSSMPERSV 485

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +S  A+I GY       KE++ L  +M    + P+  TFAS++  C       +  Q++ 
Sbjct: 486 VSVNALIAGYALK--NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHC 543

Query: 413 HAVKRGRAL-DDCVGNSLISMYARSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNS 470
             VKRG     + +G SL+ MY  S R+ DA   F      K++V +  ++  + +N  S
Sbjct: 544 AIVKRGLLCGSEFLGTSLLGMYMDSQRLADANILFSEFSSLKSIVMWTALISGHIQNECS 603

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           + A  L  E+ D  +     TF ++L   + + ++  G +IH+ I  +GF+ +    +AL
Sbjct: 604 DVALNLYREMRDNNISPDQATFVTVLQACALLSSLHDGREIHSLIFHTGFDLDELTSSAL 663

Query: 531 ISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + MY++C +V+++ QVF+E+   ++VISW SMI GFAK+G+A  AL++F +M    I P+
Sbjct: 664 VDMYAKCGDVKSSVQVFEELATKKDVISWNSMIVGFAKNGYAKCALKVFDEMTQSCITPD 723

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T++ VL+ACSHAG + EG + F  M + +GI  R++HYACMVDLLGR G L EA EFI
Sbjct: 724 DVTFLGVLTACSHAGWVYEGRQIFDVMVNYYGIEPRVDHYACMVDLLGRWGFLKEAEEFI 783

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
             + +  + ++W   LGACR+HGD + G+ AA+ ++E +PQ  + ++LLSN+YA++G+W+
Sbjct: 784 DKLEVEPNAMIWANLLGACRIHGDEKRGQRAAKKLIELEPQSSSPYVLLSNMYAASGNWD 843

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
              ++R+ M ++++ K  GCSWI    + + F  G+ SH    EI   L  L   IK+  
Sbjct: 844 EARSLRRTMIKKDIQKIPGCSWIVVGQETNLFVAGDISHSSYDEISKALKHLTALIKDNN 903

Query: 770 YLPD 773
              D
Sbjct: 904 RFQD 907



 Score =  261 bits (667), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 165/565 (29%), Positives = 301/565 (53%), Gaps = 15/565 (2%)

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDA 164
           R+   P+ V L ++++ Y   G L++A ++F+ M    R++V+W+ MIS +       +A
Sbjct: 142 RNSAVPDQVALVTVLNAYISLGKLDDACQLFQQMPIPIRNVVAWNVMISGHAKTAHYEEA 201

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           +  F +M + G   +    ++V+ A ++   +  G +++   +K G F+S + V  +LI+
Sbjct: 202 LAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHAIKQG-FESSIYVASSLIN 260

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K  +  + A +VFD +++KN + W  M+   +Q G   + + LFLDMI  G  PD F
Sbjct: 261 MYGKCQMP-DDARQVFDAISQKNMIVWNAMLGVYSQNGFLSNVMELFLDMISCGIHPDEF 319

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           T + ++S C+  E    G+QLHS  I+     ++ V  +L+DMYAK    G++ ++ K F
Sbjct: 320 TYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNALIDMYAKA---GALKEAGKHF 376

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           + M   + +SW AII GYVQ    +  A  LF  MI   + P+  + AS+L ACGN+   
Sbjct: 377 EHMTYRDHISWNAIIVGYVQE-EVEAGAFSLFRRMILDGIVPDEVSLASILSACGNIKVL 435

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY 464
              +Q +  +VK G   +   G+SLI MY++ G ++DA K + S+ E+++VS N ++  Y
Sbjct: 436 EAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSSMPERSVVSVNALIAGY 495

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE-SN 523
           A   N++++  LLHE++  G+  S  TFASL+        +  G QIH  I+K G    +
Sbjct: 496 ALK-NTKESINLLHEMQILGLKPSEITFASLIDVCKGSAKVILGLQIHCAIVKRGLLCGS 554

Query: 524 HCIYNALISMY---SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
             +  +L+ MY    R A+    F  F  +  ++++ WT++I+G  ++  +  AL ++ +
Sbjct: 555 EFLGTSLLGMYMDSQRLADANILFSEFSSL--KSIVMWTALISGHIQNECSDVALNLYRE 612

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M  + I P+  T++ VL AC+    + +G +   S+    G        + +VD+  + G
Sbjct: 613 MRDNNISPDQATFVTVLQACALLSSLHDG-REIHSLIFHTGFDLDELTSSALVDMYAKCG 671

Query: 641 SLTEALEFIRSMPLSADVLVWRTFL 665
            +  +++    +    DV+ W + +
Sbjct: 672 DVKSSVQVFEELATKKDVISWNSMI 696



 Score =  243 bits (620), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 154/531 (29%), Positives = 267/531 (50%), Gaps = 46/531 (8%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G+ PD  T+++ L +C + +N HLG+ VHS + +S LE  S    +LI LY+KC  L  A
Sbjct: 42  GHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGALIHLYAKCNSLTCA 101

Query: 133 NKIFKSMGNKR-DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
             IF S        VSW+++IS YV  G   +A+H+F +M      P++     V+ A  
Sbjct: 102 RTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAV-PDQVALVTVLNA-- 158

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM--TEKNTV 249
               +++G                                 L+ A ++F +M    +N V
Sbjct: 159 ---YISLG--------------------------------KLDDACQLFQQMPIPIRNVV 183

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W +MI+   +     +A+  F  M   G    R TL+ V+SA + L     G  +H+ A
Sbjct: 184 AWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAALNHGLLVHAHA 243

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I+ G    + V  SL++MY KC +    DD+R+VFD +   N++ W A++  Y Q+G   
Sbjct: 244 IKQGFESSIYVASSLINMYGKCQMP---DDARQVFDAISQKNMIVWNAMLGVYSQNGFLS 300

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
              ++LF DMI   + P+ FT+ S+L  C       V  Q+++  +K+    +  V N+L
Sbjct: 301 N-VMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRFTSNLFVNNAL 359

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MYA++G +++A K FE +  ++ +S+N ++  Y +      AF L   +   G+    
Sbjct: 360 IDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRRMILDGIVPDE 419

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
            + AS+LS   +I  +  G+Q H   +K G E+N    ++LI MYS+C +++ A + +  
Sbjct: 420 VSLASILSACGNIKVLEAGQQFHCLSVKLGLETNLFAGSSLIDMYSKCGDIKDAHKTYSS 479

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           M +R+V+S  ++I G+A       ++ + ++M   G+KP+ IT+ +++  C
Sbjct: 480 MPERSVVSVNALIAGYALKN-TKESINLLHEMQILGLKPSEITFASLIDVC 529



 Score =  202 bits (514), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/493 (26%), Positives = 245/493 (49%), Gaps = 47/493 (9%)

Query: 165 IHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
           +  +   +  G  P+++ F+  + AC+  +N+ +G  ++  ++K G   +  C G ALI 
Sbjct: 32  LQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQG-ALIH 90

Query: 225 MFVKGSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           ++ K +  L  A  +F        +TV WT +I+   Q G P +A+ +F D + +  +PD
Sbjct: 91  LYAKCN-SLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIF-DKMRNSAVPD 148

Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
           +  L  V++A   L                                      G +DD+ +
Sbjct: 149 QVALVTVLNAYISL--------------------------------------GKLDDACQ 170

Query: 343 VFDRM--LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           +F +M     NV++W  +I+G+ ++   + EA+  F  M +  V  +  T ASVL A  +
Sbjct: 171 LFQQMPIPIRNVVAWNVMISGHAKTAHYE-EALAFFHQMSKHGVKSSRSTLASVLSAIAS 229

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
           L   N    V+ HA+K+G      V +SLI+MY +    +DAR+ F+++ +KN++ +N M
Sbjct: 230 LAALNHGLLVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAISQKNMIVWNAM 289

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +  Y++N       EL  ++   G+    +T+ S+LS  +    +  G Q+H+ IIK  F
Sbjct: 290 LGVYSQNGFLSNVMELFLDMISCGIHPDEFTYTSILSTCACFEYLEVGRQLHSAIIKKRF 349

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
            SN  + NALI MY++   ++ A + F+ M  R+ ISW ++I G+ +    A A  +F +
Sbjct: 350 TSNLFVNNALIDMYAKAGALKEAGKHFEHMTYRDHISWNAIIVGYVQEEVEAGAFSLFRR 409

Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
           M+ DGI P+ ++  ++LSAC +  ++  G + F  +  + G+   +   + ++D+  + G
Sbjct: 410 MILDGIVPDEVSLASILSACGNIKVLEAG-QQFHCLSVKLGLETNLFAGSSLIDMYSKCG 468

Query: 641 SLTEALEFIRSMP 653
            + +A +   SMP
Sbjct: 469 DIKDAHKTYSSMP 481



 Score = 77.4 bits (189), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 49/189 (25%), Positives = 91/189 (48%), Gaps = 6/189 (3%)

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           K+ +SE+  +      ++G     +TFA  LS  + +  +  G  +H+ +IKSG ES   
Sbjct: 24  KHYSSERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSF 83

Query: 526 IYNALISMYSRCANVEAAFQVFKE--MEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
              ALI +Y++C ++  A  +F        + +SWT++I+G+ + G    AL IF KM  
Sbjct: 84  CQGALIHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRN 143

Query: 584 DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLT 643
             + P+ +  + VL+A    G + +  + F+ M      ++ +  +  M+    ++    
Sbjct: 144 SAV-PDQVALVTVLNAYISLGKLDDACQLFQQMPIP---IRNVVAWNVMISGHAKTAHYE 199

Query: 644 EALEFIRSM 652
           EAL F   M
Sbjct: 200 EALAFFHQM 208



 Score = 70.9 bits (172), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 67/311 (21%), Positives = 128/311 (41%), Gaps = 50/311 (16%)

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           +  ++ ++  +    +P+ FTFA  L AC  L + ++   V++  +K G         +L
Sbjct: 29  ERVLQFYASFMNSGHSPDQFTFAVTLSACAKLQNLHLGRAVHSCVIKSGLESTSFCQGAL 88

Query: 430 ISMYARSGRMEDARKAFESLFEKNL--VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           I +YA+   +  AR  F S    +L  VS+  ++  Y +     +A  +  ++ ++ V  
Sbjct: 89  IHLYAKCNSLTCARTIFASAPFPHLHTVSWTALISGYVQAGLPHEALHIFDKMRNSAVPD 148

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
                  L                                NA IS+      ++ A Q+F
Sbjct: 149 QVALVTVL--------------------------------NAYISL----GKLDDACQLF 172

Query: 548 KEM--EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           ++M    RNV++W  MI+G AK      AL  F++M   G+K +  T  +VLSA +    
Sbjct: 173 QQMPIPIRNVVAWNVMISGHAKTAHYEEALAFFHQMSKHGVKSSRSTLASVLSAIASLAA 232

Query: 606 ISEGWKHFRSMYDEHGIVQRMEH----YACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           ++ G      +   H I Q  E      + ++++ G+     +A +   ++    +++VW
Sbjct: 233 LNHGL-----LVHAHAIKQGFESSIYVASSLINMYGKCQMPDDARQVFDAIS-QKNMIVW 286

Query: 662 RTFLGACRVHG 672
              LG    +G
Sbjct: 287 NAMLGVYSQNG 297


>gi|147770672|emb|CAN62482.1| hypothetical protein VITISV_010810 [Vitis vinifera]
          Length = 704

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/597 (38%), Positives = 361/597 (60%), Gaps = 6/597 (1%)

Query: 266 DAIRLFLDMILSG-FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           +A+ LF  + L+G +  D  T   +VSAC  L+     K++ ++ I +GL  D  +   +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           + M+ KC   G + D+R++FD M + N++SW  II G V +G    EA +LF  M Q   
Sbjct: 173 LLMHVKC---GMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDY-FEAFRLFLMMWQXFS 228

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
                 F ++++A   L       Q+++ ++K G   D  V  +LI MY++ G +EDA+ 
Sbjct: 229 DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQC 288

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F+ + EK  V +N+++  YA +  SE+A  + +E+ D+GV    +TF+ ++   + + +
Sbjct: 289 VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLAS 348

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           +   +Q HA +++ GF  +     AL+ +YS+   +E A  VF  M  +NVISW ++I G
Sbjct: 349 LEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +  HG    A+E+F +ML +G+ PN +T++AVLSACS++GL   GW+ F SM  +H I  
Sbjct: 409 YGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKP 468

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           R  HYACM++LLGR G L EA   I+  P    V +W   L ACRVH + ELGK AAE +
Sbjct: 469 RAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKL 528

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
               P+  + +++L N+Y  +G  E  A + + +K R L     CSWIE   + + F  G
Sbjct: 529 YGMGPEKLSNYVVLLNIYNXSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISG 588

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           +  H ++ EIY +LD+L L+I + GY+P   F+L +++E+++ + L  HSEK+A+AFGLI
Sbjct: 589 DKCHAQSKEIYQKLDELMLEISKHGYVPQXKFLLPDVDEQEE-RVLLYHSEKLAIAFGLI 647

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +TS   P+++ ++ R+CGDCH+AIK I++VT REIV+RD++RFHH KDG CSC DYW
Sbjct: 648 NTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  192 bits (487), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 117/343 (34%), Positives = 186/343 (54%), Gaps = 10/343 (2%)

Query: 58  RVQKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           R  +A+   +++   G +  D +TY  L+ +CI  ++    K V + +  S L+P+  + 
Sbjct: 110 RYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLR 169

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N ++ ++ KCG + +A ++F  M  K +I+SW+++I   V+ G   +A  +F+ M +   
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEK-NILSWNTIIGGLVDAGDYFEAFRLFLMMWQXFS 228

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
                 F  +IRA +    +  G  ++   LK G    DV V CALIDM+ K GS+  E 
Sbjct: 229 DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTG-VGGDVFVACALIDMYSKCGSI--ED 285

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD+M EK TVGW  +I      G   +A+ ++ +M  SG   D FT S ++  C+ 
Sbjct: 286 AQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICAR 345

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L      KQ H+  +R G  LD+    +LVD+Y+K    G ++D++ VFD M   NV+SW
Sbjct: 346 LASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKW---GRIEDAKHVFDMMPHKNVISW 402

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            A+I GY  + GR  EAV++F  M+   + PNH TF +VL AC
Sbjct: 403 NALIAGY-GNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSAC 444



 Score =  107 bits (266), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 92/362 (25%), Positives = 161/362 (44%), Gaps = 49/362 (13%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ +HS   ++ +  +  +  +LI +YSKCG + +A  +F  M  K   V W+S+I+ Y 
Sbjct: 251 GRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQCVFDQMPEK-TTVGWNSIIAGYA 309

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G   +A+ M+ EM + G   + + FS +IR C+   ++      +  L++ G F  D+
Sbjct: 310 LHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHG-FGLDI 368

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
               AL+D++ K    +E A  VFD M  KN + W  +I      G   +A+ +F  M+ 
Sbjct: 369 VANTALVDLYSKWG-RIEDAKHVFDMMPHKNVISWNALIAGYGNHGRGVEAVEMFERMLH 427

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
            G +P+  T   V+SACS      SG     W I   ++ D                   
Sbjct: 428 EGMVPNHVTFLAVLSACS-----YSGLSDRGWEIFESMSRD------------------- 463

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
                K+  R + +  M         ++  GR+    + F+ +      P    +A++L 
Sbjct: 464 ----HKIKPRAMHYACM---------IELLGREGLLDEAFALIKDAPFKPTVNMWAALLT 510

Query: 397 AC---GNL-LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           AC    N  L    AE++Y    ++   L + V   L+++Y  SGR+E+A    ++L  +
Sbjct: 511 ACRVHKNFELGKFAAEKLYGMGPEK---LSNYV--VLLNIYNXSGRLEEAAAVIQTLKRR 565

Query: 453 NL 454
            L
Sbjct: 566 GL 567



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M   G   D  T+S++++ C R  +    K  H+ L R     + V  
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+ LYSK G + +A  +F  M +K +++SW+++I+ Y N G+ V+A+ MF  ML  G 
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHK-NVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F AV+ ACS +     G  I+  + +             +I++  +  + L+ A
Sbjct: 431 VPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGL-LDEA 489

Query: 237 YKVFDKMTEKNTVG-WTLMITRC 258
           + +      K TV  W  ++T C
Sbjct: 490 FALIKDAPFKPTVNMWAALLTAC 512


>gi|20197649|gb|AAM15176.1| putative selenium-binding protein [Arabidopsis thaliana]
          Length = 472

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 208/476 (43%), Positives = 317/476 (66%), Gaps = 6/476 (1%)

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            FT++ +L A   +  S V  QV    VK        VG +L+  Y + G++E+A K F 
Sbjct: 1   EFTYSVILTALPVISPSEVHAQV----VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFS 56

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS-GASSIGAIG 506
            + +K++V+++ M+  YA+   +E A ++  E+   G+  + +TF+S+L+  A++  ++G
Sbjct: 57  GIDDKDIVAWSAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMG 116

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           +G+Q H   IKS  +S+ C+ +AL++MY++  N+E+A +VFK   +++++SW SMI+G+A
Sbjct: 117 QGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMISGYA 176

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           +HG A +AL++F +M    +K +G+T+I V +AC+HAGL+ EG K+F  M  +  I    
Sbjct: 177 QHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTK 236

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           EH +CMVDL  R+G L +A++ I +MP  A   +WRT L ACRVH  TELG+ AAE I+ 
Sbjct: 237 EHNSCMVDLYSRAGQLEKAMKVIENMPNPAGSTIWRTILAACRVHKKTELGRLAAEKIIA 296

Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
             P+D AA++LLSN+YA +G W+  A +RK M ERN+ KE G SWIE  NK + F  G+ 
Sbjct: 297 MKPEDSAAYVLLSNMYAESGDWQERAKVRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDR 356

Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
           SHP   +IY +L+ L+ ++K+ GY PDT++VL ++++E K   L QHSE++A+AFGLI+T
Sbjct: 357 SHPLKDQIYMKLEDLSTRLKDLGYEPDTSYVLQDIDDEHKEAVLAQHSERLAIAFGLIAT 416

Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
            K  P+ + KNLRVCGDCH  IK I+ +  REIV+RDSNRFHH   DG CSC D+W
Sbjct: 417 PKGSPLLIIKNLRVCGDCHLVIKLIAKIEEREIVVRDSNRFHHFSSDGVCSCGDFW 472



 Score =  137 bits (344), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/273 (28%), Positives = 148/273 (54%), Gaps = 18/273 (6%)

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
           FT S +++A   +    S  ++H+  ++T       VG +L+D Y K    G V+++ KV
Sbjct: 2   FTYSVILTALPVI----SPSEVHAQVVKTNYERSSTVGTALLDAYVKL---GKVEEAAKV 54

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F  + D ++++W+A++ GY Q+G   + A+K+F ++ +G + PN FTF+S+L  C     
Sbjct: 55  FSGIDDKDIVAWSAMLAGYAQTG-ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNA 113

Query: 404 S-NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
           S    +Q +  A+K       CV ++L++MYA+ G +E A + F+   EK+LVS+N+M+ 
Sbjct: 114 SMGQGKQFHGFAIKSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQREKDLVSWNSMIS 173

Query: 463 AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS---- 518
            YA++  + KA ++  E++   V     TF  + +  +  G + +GE+    +++     
Sbjct: 174 GYAQHGQAMKALDVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIA 233

Query: 519 -GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
              E N C    ++ +YSR   +E A +V + M
Sbjct: 234 PTKEHNSC----MVDLYSRAGQLEKAMKVIENM 262



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/250 (31%), Positives = 133/250 (53%), Gaps = 8/250 (3%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           VH+ + ++  E +S +  +L+  Y K G + EA K+F  + +K DIV+WS+M++ Y   G
Sbjct: 19  VHAQVVKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDK-DIVAWSAMLAGYAQTG 77

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE-NVAIGHIIYGFLLKCGYFDSDVCV 218
           +   AI MF E+ + G  PNE+ FS+++  C+ T  ++  G   +GF +K    DS +CV
Sbjct: 78  ETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIK-SRLDSSLCV 136

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
             AL+ M+ K   ++ESA +VF +  EK+ V W  MI+   Q G    A+ +F +M    
Sbjct: 137 SSALLTMYAKKG-NIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRK 195

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSV 337
              D  T  GV +AC+   L   G++     +R   +A        +VD+Y++    G +
Sbjct: 196 VKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRA---GQL 252

Query: 338 DDSRKVFDRM 347
           + + KV + M
Sbjct: 253 EKAMKVIENM 262



 Score = 80.1 bits (196), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 110/226 (48%), Gaps = 15/226 (6%)

Query: 47  SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLT 105
           S  L  +   G  + AI     +T+ G  P+  T+S +L  C  +  +   GK  H    
Sbjct: 67  SAMLAGYAQTGETEAAIKMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAI 126

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           +S+L+ +  + ++L+++Y+K G++  A ++FK    ++D+VSW+SMIS Y   G+ + A+
Sbjct: 127 KSRLDSSLCVSSALLTMYAKKGNIESAEEVFKRQ-REKDLVSWNSMISGYAQHGQAMKAL 185

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALID 224
            +F EM +     +   F  V  AC++   V  G   +  +++ C    +     C ++D
Sbjct: 186 DVFKEMKKRKVKMDGVTFIGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSC-MVD 244

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVG---WTLMITRC-----TQLG 262
           ++ +    LE A KV + M   N  G   W  ++  C     T+LG
Sbjct: 245 LYSRAG-QLEKAMKVIENMP--NPAGSTIWRTILAACRVHKKTELG 287


>gi|242037917|ref|XP_002466353.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
 gi|241920207|gb|EER93351.1| hypothetical protein SORBIDRAFT_01g006260 [Sorghum bicolor]
          Length = 862

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/732 (31%), Positives = 411/732 (56%), Gaps = 8/732 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T   ++KSC       LG+LVH     + L  +  + ++LI +YS  G L +A   
Sbjct: 139 PDAHTLPYVVKSCAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDA 198

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M   RD V W+ M+  Y+  G    A+ +F  M   G  PN    +  +  C+   +
Sbjct: 199 FDGM-PWRDCVLWNVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEAD 257

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++   +KCG  + +V V   L+ M+ K    L+ A+++F+ +   + V W  MI
Sbjct: 258 LLSGVQLHSLAVKCG-LEQEVAVANTLLSMYAKCRC-LDDAWRLFELLPRDDLVTWNGMI 315

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           + C Q G   +A+ LF DM+ SG  PD  TL  ++ A ++L     GK++H + IR  + 
Sbjct: 316 SGCVQNGLLDEALGLFCDMLRSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVH 375

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           +D  +  +LVD+Y KC     V  +R ++D     +V+  + +I+GYV +G  +K A+++
Sbjct: 376 MDAFLVSALVDIYFKCR---DVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEK-ALQM 431

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  +++  + PN  T ASVL AC ++    + ++++ + ++        V ++L+ MYA+
Sbjct: 432 FRYLLEQCIKPNAVTVASVLPACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAK 491

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR++ +   F  +  K+ V++N+M+ ++++N   ++A +L  ++   G+  +  T +S 
Sbjct: 492 CGRLDLSHYIFSKMSLKDEVTWNSMISSFSQNGEPQEALDLFRQMCMEGIKYNNVTISSA 551

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           LS  +S+ AI  G++IH  IIK   +++    +ALI MY++C N+E A +VF+ M D+N 
Sbjct: 552 LSACASLPAIYYGKEIHGVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNE 611

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW S+I+ +  HG    ++   ++M  +G KP+ +T++A++SAC+HAGL+ EG + F+ 
Sbjct: 612 VSWNSIISAYGAHGLVKESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQC 671

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M  E+ I  RMEH+ACMVDL  RSG L +A++FI  MP   D  +W   L ACRVH + E
Sbjct: 672 MTKEYLIAPRMEHFACMVDLYSRSGRLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVE 731

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           L   A++ + + DP +   ++L+SN+ A AG W+ V+ +R+ MK+  ++K  G SW++ +
Sbjct: 732 LADIASQELFKLDPGNSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVN 791

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           N  H F   + SHP++ +IY  L  L  +++E GY+P  +   H +  +   Q  F+  +
Sbjct: 792 NSSHLFVASDKSHPESEDIYTSLKALLQELREEGYVPRPDLC-HPMHPDNNTQVGFKKYK 850

Query: 796 KIAVAFGLISTS 807
           ++    G +  S
Sbjct: 851 RLFDVLGTLIIS 862



 Score =  200 bits (509), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 130/500 (26%), Positives = 256/500 (51%), Gaps = 10/500 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G V  A+     M   G  P+  T +  L  C    +   G  +HSL  +  LE  
Sbjct: 217 YIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVKCGLEQE 276

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+L+S+Y+KC  L++A ++F+ +  + D+V+W+ MIS  V  G   +A+ +F +ML
Sbjct: 277 VAVANTLLSMYAKCRCLDDAWRLFELL-PRDDLVTWNGMISGCVQNGLLDEALGLFCDML 335

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSV 231
             G  P+     +++ A ++   +  G  ++G++++ C + D+ +    AL+D++ K   
Sbjct: 336 RSGARPDSVTLVSLLPALTDLNGLKQGKEVHGYIIRNCVHMDAFLV--SALVDIYFKCR- 392

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D+ +A  ++D     + V  + +I+     G    A+++F  ++     P+  T++ V+ 
Sbjct: 393 DVRTARNLYDAARAIDVVIGSTVISGYVLNGMSEKALQMFRYLLEQCIKPNAVTVASVLP 452

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ +     G+++H + +R        V  +L+DMYAKC   G +D S  +F +M   +
Sbjct: 453 ACASISALPLGQEIHGYVLRNAYEGKCYVESALMDMYAKC---GRLDLSHYIFSKMSLKD 509

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++W ++I+ + Q+ G  +EA+ LF  M    +  N+ T +S L AC +L      ++++
Sbjct: 510 EVTWNSMISSFSQN-GEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIH 568

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K     D    ++LI MYA+ G ME A + FE + +KN VS+N+++ AY  +   +
Sbjct: 569 GVIIKGPIKADIFAESALIDMYAKCGNMELALRVFEFMPDKNEVSWNSIISAYGAHGLVK 628

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA-L 530
           ++   LH +++ G      TF +L+S  +  G + +G Q+   + K    +    + A +
Sbjct: 629 ESVSFLHRMQEEGYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACM 688

Query: 531 ISMYSRCANVEAAFQVFKEM 550
           + +YSR   ++ A Q   +M
Sbjct: 689 VDLYSRSGRLDKAIQFIADM 708



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 88/332 (26%), Positives = 161/332 (48%), Gaps = 12/332 (3%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALD---VCVGCSLVDMYAKCTVDGSVDDSRK 342
           L  ++  C        G Q+H+ A+ +G   +   + +   L+ MY    +     D+  
Sbjct: 35  LLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMY---VLARRFRDAVA 91

Query: 343 VFD---RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP--NHFTFASVLKA 397
           VF    R    + + W  +I G+  + G    AV  +  M     AP  +  T   V+K+
Sbjct: 92  VFSALPRAAAGSSLPWNWLIRGFT-AAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVKS 150

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C  L   ++   V+  A   G A D  VG++LI MY+ +G + DAR AF+ +  ++ V +
Sbjct: 151 CAALGAVSLGRLVHRTARATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWRDCVLW 210

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N M+D Y K  +   A  L   +  +G   +  T A  LS  ++   +  G Q+H+  +K
Sbjct: 211 NVMMDGYIKAGDVGGAVRLFRNMRVSGCEPNFATLACFLSVCAAEADLLSGVQLHSLAVK 270

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
            G E    + N L+SMY++C  ++ A+++F+ +   ++++W  MI+G  ++G    AL +
Sbjct: 271 CGLEQEVAVANTLLSMYAKCRCLDDAWRLFELLPRDDLVTWNGMISGCVQNGLLDEALGL 330

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           F  ML  G +P+ +T +++L A +    + +G
Sbjct: 331 FCDMLRSGARPDSVTLVSLLPALTDLNGLKQG 362



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 100/205 (48%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  Q+A+     M  +G   +  T S  L +C      + GK +H ++ +  ++ +  
Sbjct: 522 QNGEPQEALDLFRQMCMEGIKYNNVTISSALSACASLPAIYYGKEIHGVIIKGPIKADIF 581

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
             ++LI +Y+KCG++  A ++F+ M +K + VSW+S+IS+Y   G   +++     M E 
Sbjct: 582 AESALIDMYAKCGNMELALRVFEFMPDKNE-VSWNSIISAYGAHGLVKESVSFLHRMQEE 640

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G+ P+   F A+I AC++   V  G  ++  + K       +     ++D++ + S  L+
Sbjct: 641 GYKPDHVTFLALISACAHAGLVEEGLQLFQCMTKEYLIAPRMEHFACMVDLYSR-SGRLD 699

Query: 235 SAYKVFDKMTEKNTVG-WTLMITRC 258
            A +    M  K   G W  ++  C
Sbjct: 700 KAIQFIADMPFKPDAGIWGALLHAC 724



 Score = 52.8 bits (125), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 49/196 (25%), Positives = 81/196 (41%), Gaps = 10/196 (5%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH---CIYNALISMY---SRCANV 540
           +SA    +LL G  S   +  G QIHAR + SG  SNH    ++  L+ MY    R  + 
Sbjct: 30  SSADRLLALLRGCVSAPHLPLGLQIHARAVVSGALSNHNHLALHTRLLGMYVLARRFRDA 89

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD--GIKPNGITYIAVLS 598
            A F         + + W  +I GF   G  + A+  + KM        P+  T   V+ 
Sbjct: 90  VAVFSALPRAAAGSSLPWNWLIRGFTAAGHHSLAVLFYVKMWTHPAAPSPDAHTLPYVVK 149

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           +C+  G +S G    R+     G+   +   + ++ +   +G L +A +    MP   D 
Sbjct: 150 SCAALGAVSLGRLVHRTA-RATGLASDVYVGSALIKMYSDAGLLRDARDAFDGMPWR-DC 207

Query: 659 LVWRTFLGACRVHGDT 674
           ++W   +      GD 
Sbjct: 208 VLWNVMMDGYIKAGDV 223


>gi|297802056|ref|XP_002868912.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297314748|gb|EFH45171.1| hypothetical protein ARALYDRAFT_352947 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1057

 Score =  437 bits (1124), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 246/716 (34%), Positives = 400/716 (55%), Gaps = 21/716 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCI------RSRNFHLGKLVHSLLTRSKLEPNS 113
           +  +  LD    + N P+    S  +++C       R   F L     S L +S+ + + 
Sbjct: 128 ESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQL----QSFLVKSRFDRDV 183

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +   LI  Y K G+++ A  +F ++  K   V+W++MIS  V  G+   ++ +F +++E
Sbjct: 184 YVGTLLIDFYLKEGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLME 242

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
               P+ Y  S V+ ACS    +  G  I+  +L+ G+ + D  +   LID +VK G V 
Sbjct: 243 GNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGH-EKDASLMNVLIDSYVKCGRV- 300

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
             +A+K+FD M  KN + WT +++   Q    ++A+ LF  M   G  PD F  S ++++
Sbjct: 301 -RAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSSILTS 359

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ L     G Q+H++ I+  L  D  V  SL+DMYAKC     + ++RKVFD     +V
Sbjct: 360 CASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC---LTEARKVFDIFAADDV 416

Query: 353 MSWTAIITGYVQSGGRDK--EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + + A+I GY + G + +  +A+ +F DM    + P+  TF S+L+A  +L    +++Q+
Sbjct: 417 VLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +    K G  LD   G++LI++Y+    ++D+R  F+ +  K+LV +N+M   Y +   +
Sbjct: 477 HGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSEN 536

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E+A  L  E++ +      +TF  +++ A ++ ++  G++ H +++K G E N  I NAL
Sbjct: 537 EEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLGQEFHCQLLKRGLECNPYITNAL 596

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           + MY++C + E A + F     R+V+ W S+I+ +A HG   +AL++  KM+ +GI+PN 
Sbjct: 597 LDMYAKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGRKALQMLEKMMCEGIEPNY 656

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           IT++ VLSACSHAGL+ +G K F  M    GI    EHY CMV LLGR+G L EA E I 
Sbjct: 657 ITFVGVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNEARELIE 715

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
            MP     +VWR+ L  C   G+ EL ++AAEM +  DP+D  +  LLSN+YAS G W  
Sbjct: 716 KMPTKPAAIVWRSLLSGCAKAGNVELAEYAAEMAILSDPKDSGSFTLLSNIYASKGMWTD 775

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
              +R+RMK   ++KE G SWIE + +VH F   + SH K  +IY  LD L ++I+
Sbjct: 776 AKKVRERMKFEGVVKEPGRSWIEINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  285 bits (729), Expect = 8e-74,   Method: Compositional matrix adjust.
 Identities = 182/593 (30%), Positives = 323/593 (54%), Gaps = 20/593 (3%)

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
           +VH  +  S LE ++ + N L++LYS+ G +  A K+F+ M  +R++V+WS+M+S+  + 
Sbjct: 65  VVHGQIIVSGLELDTYLSNILMNLYSRAGGMVYARKVFEKM-PERNLVTWSTMVSACNHH 123

Query: 159 GKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCGYFDSD 215
           G   +++ +F++        PNEY  S+ I+ACS  +      +  +  FL+K   FD D
Sbjct: 124 GFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLDGSGRWMVFQLQSFLVK-SRFDRD 182

Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           V VG  LID ++K G++D   A  VFD + EK+TV WT MI+ C ++G    +++LF  +
Sbjct: 183 VYVGTLLIDFYLKEGNIDY--ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQLFYQL 240

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
           +    +PD + LS V+SACS L     GKQ+H+  +R G   D  +   L+D Y KC   
Sbjct: 241 MEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYVKC--- 297

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G V  + K+FD M + N++SWT +++GY Q+    KEA++LF+ M +  + P+ F  +S+
Sbjct: 298 GRVRAAHKLFDGMPNKNIISWTTLLSGYKQN-SLHKEAMELFTSMPKFGLKPDMFACSSI 356

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L +C +L       QV+ + +K     D  V NSLI MYA+   + +ARK F+     ++
Sbjct: 357 LTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADDV 416

Query: 455 VSYNTMVDAYAK---NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           V +N M++ Y++         A  + H++    +  S  TF SLL  ++S+ ++G  +QI
Sbjct: 417 VLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQI 476

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H  + K G   +    +ALI++YS C  ++ +  VF EM+ ++++ W SM +G+ +    
Sbjct: 477 HGLMFKFGLNLDIFAGSALIAVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFSGYVQQSEN 536

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             AL +F ++     +P+  T++ +++A  +   +  G + F     + G+         
Sbjct: 537 EEALNLFLELQLSRDRPDEFTFVDMVTAAGNLASLQLG-QEFHCQLLKRGLECNPYITNA 595

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           ++D+  + GS  +A +   S   S DV+ W + + +   HG+   G+ A +M+
Sbjct: 596 LLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGE---GRKALQML 644



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 228/408 (55%), Gaps = 16/408 (3%)

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
           ++++G ++  G  + D  +   L++++ +    +  A KVF+KM E+N V W+ M++ C 
Sbjct: 64  NVVHGQIIVSG-LELDTYLSNILMNLYSRAG-GMVYARKVFEKMPERNLVTWSTMVSACN 121

Query: 260 QLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGK----QLHSWAIRTGL 314
             G   +++ +FLD   +    P+ + LS  + ACS L+   SG+    QL S+ +++  
Sbjct: 122 HHGFYEESLVVFLDFWRTRKNSPNEYILSSFIQACSGLD--GSGRWMVFQLQSFLVKSRF 179

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
             DV VG  L+D Y K   +G++D +R VFD + + + ++WT +I+G V+  GR   +++
Sbjct: 180 DRDVYVGTLLIDFYLK---EGNIDYARLVFDALPEKSTVTWTTMISGCVKM-GRSYVSLQ 235

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF  +++G V P+ +  ++VL AC  L      +Q++ H ++ G   D  + N LI  Y 
Sbjct: 236 LFYQLMEGNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGHEKDASLMNVLIDSYV 295

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + GR+  A K F+ +  KN++S+ T++  Y +N   ++A EL   +   G+    +  +S
Sbjct: 296 KCGRVRAAHKLFDGMPNKNIISWTTLLSGYKQNSLHKEAMELFTSMPKFGLKPDMFACSS 355

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           +L+  +S+ A+  G Q+HA  IK+   ++  + N+LI MY++C  +  A +VF      +
Sbjct: 356 ILTSCASLHALEFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTEARKVFDIFAADD 415

Query: 555 VISWTSMITGFAKHGFAAR---ALEIFYKMLADGIKPNGITYIAVLSA 599
           V+ + +MI G+++ G       AL IF+ M    I+P+ +T++++L A
Sbjct: 416 VVLFNAMIEGYSRLGTQWELHDALNIFHDMRFRLIRPSLLTFVSLLRA 463



 Score = 46.6 bits (109), Expect = 0.052,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N G  +KA+  L+ M  +G  P+  T+  +L +C  +     G     L+ R  +EP + 
Sbjct: 633 NHGEGRKALQMLEKMMCEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPETE 692

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
               ++SL  + G LNEA ++ + M  K   + W S++S     G
Sbjct: 693 HYVCMVSLLGRAGRLNEARELIEKMPTKPAAIVWRSLLSGCAKAG 737


>gi|225456313|ref|XP_002280013.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic [Vitis vinifera]
          Length = 704

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/597 (38%), Positives = 361/597 (60%), Gaps = 6/597 (1%)

Query: 266 DAIRLFLDMILSG-FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSL 324
           +A+ LF  + L+G +  D  T   +VSAC  L+     K++ ++ I +GL  D  +   +
Sbjct: 113 EALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLRNRV 172

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQV 384
           + M+ KC   G + D+R++FD M + N++SW  II G V +G    EA +LF  M Q   
Sbjct: 173 LLMHVKC---GMMIDARRLFDEMPEKNILSWNTIIGGLVDAGDY-FEAFRLFLMMWQDFS 228

Query: 385 APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
                 F ++++A   L       Q+++ ++K G   D  V  +LI MY++ G +EDA+ 
Sbjct: 229 DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTGVGGDVFVACALIDMYSKCGSIEDAQC 288

Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
            F+ + EK  V +N+++  YA +  SE+A  + +E+ D+GV    +TF+ ++   + + +
Sbjct: 289 VFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLAS 348

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           +   +Q HA +++ GF  +     AL+ +YS+   +E A  VF  M  +NVISW ++I G
Sbjct: 349 LEHAKQAHAGLVRHGFGLDIVANTALVDLYSKWGRIEDAKHVFDMMPHKNVISWNALIAG 408

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +  HG    A+E+F +ML +G+ PN +T++AVLSACS++GL   GW+ F SM  +H I  
Sbjct: 409 YGNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKP 468

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           R  HYACM++LLGR G L EA   I+  P    V +W   L ACRVH + ELGK AAE +
Sbjct: 469 RAMHYACMIELLGREGLLDEAFALIKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKL 528

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
               P+  + +++L N+Y  +G  E  A + + +K R L     CSWIE   + + F  G
Sbjct: 529 YGMGPEKLSNYVVLLNIYNRSGRLEEAAAVIQTLKRRGLRMLPACSWIEIKKQPYGFISG 588

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           +  H ++ EIY +LD+L L+I + GY+P   F+L +++E+++ + L  HSEK+A+AFGLI
Sbjct: 589 DKCHAQSKEIYQKLDELMLEISKHGYVPQDKFLLPDVDEQEE-RVLLYHSEKLAIAFGLI 647

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +TS   P+++ ++ R+CGDCH+AIK I++VT REIV+RD++RFHH KDG CSC DYW
Sbjct: 648 NTSDWTPLQIVQSHRICGDCHSAIKLIALVTRREIVVRDASRFHHFKDGSCSCGDYW 704



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 145/507 (28%), Positives = 242/507 (47%), Gaps = 58/507 (11%)

Query: 58  RVQKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           R  +A+   +++   G +  D +TY  L+ +CI  ++    K V + +  S L+P+  + 
Sbjct: 110 RYHEALELFEILELNGAYDMDSETYDALVSACIGLKSIRGVKKVFNYMINSGLDPDEYLR 169

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N ++ ++ KCG + +A ++F  M  K +I+SW+++I   V+ G   +A  +F+ M +   
Sbjct: 170 NRVLLMHVKCGMMIDARRLFDEMPEK-NILSWNTIIGGLVDAGDYFEAFRLFLMMWQDFS 228

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
                 F  +IRA +    +  G  ++   LK G    DV V CALIDM+ K GS+  E 
Sbjct: 229 DAGSRMFVTMIRASAGLGLIFAGRQLHSCSLKTG-VGGDVFVACALIDMYSKCGSI--ED 285

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A  VFD+M EK TVGW  +I      G   +A+ ++ +M  SG   D FT S ++  C+ 
Sbjct: 286 AQCVFDQMPEKTTVGWNSIIAGYALHGYSEEALSMYYEMRDSGVKIDNFTFSIIIRICAR 345

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L      KQ H+  +R G  LD+    +LVD+Y+K    G ++D++ VFD M   NV+SW
Sbjct: 346 LASLEHAKQAHAGLVRHGFGLDIVANTALVDLYSKW---GRIEDAKHVFDMMPHKNVISW 402

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
            A+I GY  + GR  EAV++F  M+   + PNH TF +VL AC                 
Sbjct: 403 NALIAGY-GNHGRGVEAVEMFERMLHEGMVPNHVTFLAVLSAC----------------- 444

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNS 470
                             + SG  +   + FES+      +   + Y  M++   +    
Sbjct: 445 ------------------SYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGLL 486

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE--SNHCIYN 528
           ++AF L   I+D     +   +A+LL+          G+    ++   G E  SN   Y 
Sbjct: 487 DEAFAL---IKDAPFKPTVNMWAALLTACRVHKNFELGKFAAEKLYGMGPEKLSN---YV 540

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNV 555
            L+++Y+R   +E A  V + ++ R +
Sbjct: 541 VLLNIYNRSGRLEEAAAVIQTLKRRGL 567



 Score = 81.3 bits (199), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+     M   G   D  T+S++++ C R  +    K  H+ L R     + V  
Sbjct: 312 GYSEEALSMYYEMRDSGVKIDNFTFSIIIRICARLASLEHAKQAHAGLVRHGFGLDIVAN 371

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
            +L+ LYSK G + +A  +F  M +K +++SW+++I+ Y N G+ V+A+ MF  ML  G 
Sbjct: 372 TALVDLYSKWGRIEDAKHVFDMMPHK-NVISWNALIAGYGNHGRGVEAVEMFERMLHEGM 430

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            PN   F AV+ ACS +     G  I+  + +             +I++  +  + L+ A
Sbjct: 431 VPNHVTFLAVLSACSYSGLSDRGWEIFESMSRDHKIKPRAMHYACMIELLGREGL-LDEA 489

Query: 237 YKVFDKMTEKNTVG-WTLMITRC 258
           + +      K TV  W  ++T C
Sbjct: 490 FALIKDAPFKPTVNMWAALLTAC 512


>gi|147833266|emb|CAN77478.1| hypothetical protein VITISV_013730 [Vitis vinifera]
          Length = 1009

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 280/878 (31%), Positives = 429/878 (48%), Gaps = 125/878 (14%)

Query: 68   LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
            LM  +G  PD      +LK+C       +GK+VH  + R  +E +  + N+LI  YS CG
Sbjct: 173  LMVYEGMLPDKYLVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCG 232

Query: 128  DL-------------------------------NEANKIFKSM---GNKRDIVSWSSMIS 153
            DL                               +EA  IF  M   G K D++SWS+++S
Sbjct: 233  DLGSSRSVFHSMQERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLS 292

Query: 154  SY-----------------------------------VNRGKQVDAIHMFVEMLELGFCP 178
             +                                   V  G   DA+ MF  ML     P
Sbjct: 293  GFARNGEIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLEDALDMFSRMLWYPEDP 352

Query: 179  NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAY 237
            N    ++++ AC+  + + +G  I+    K G    +V V  ++IDM+ K GS D   A 
Sbjct: 353  NIITIASILPACTGLKALRLGKAIHXIAXKHGIV-GNVYVEGSVIDMYSKCGSYDY--AE 409

Query: 238  KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
            KVF K   KNT  W  MI      G   DA+ L   M   G+ PD  T + ++S  +   
Sbjct: 410  KVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNG 469

Query: 298  LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
            L T   +L S  ++ GL                                    NV+S+  
Sbjct: 470  LKTQAXELLSEMVQMGL----------------------------------KPNVVSFNV 495

Query: 358  IITGYVQSGGRDKEAVKLF------------SDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            +I+G+ QSG    EA+K+F            ++++   + PN  T    L AC +L    
Sbjct: 496  LISGFQQSG-LSYEALKVFRIMQSPSDGCNPNEVLNLSMRPNPITITGALPACADLNLWC 554

Query: 406  VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
              ++++ + ++ G   +  V ++L+ MYA+   M+ A K F  +  +N VS+N ++  Y 
Sbjct: 555  QGKEIHGYTLRNGFEPNIFVSSALVDMYAKCHDMDSANKVFFRIDGRNTVSWNALMAGYI 614

Query: 466  KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF-ESNH 524
             N   E+A +L  E+   G+  S+ TF  L      I AI  G  +H    K    E  +
Sbjct: 615  NNKQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHGYAAKCQLDELKN 674

Query: 525  CIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
             I +ALI MY++C ++  A  VF    +++V  W +MI+ F+ HG A  A  +F +M   
Sbjct: 675  AIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMARNAFAVFXQMELL 734

Query: 585  GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
            GI P+ IT++++LSAC+  GL+ EGWK+F SM   +G+   +EHY CMV +LG +G L E
Sbjct: 735  GIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCMVGILGGAGLLDE 794

Query: 645  ALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYAS 704
            AL+FIR MP   D  +W T L ACRVH + E+G+ AA+ + E +P +   ++LLSN+Y S
Sbjct: 795  ALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPDNATNYMLLSNIYVS 854

Query: 705  AGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALK 764
            +G W++  N+R  M+ R L+    CS++   +    F  GE+SHP+  EI    D LA K
Sbjct: 855  SGMWDFAKNLRSFMRGRKLLTIKECSYLTVGSHXCTFKGGESSHPELEEILETWDXLARK 914

Query: 765  IKEFGYLP-DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGD 823
            ++  GY P D  F   + EE++   +   H+EK+A+ FG+IS++  +P+ V KN+R+C D
Sbjct: 915  MELSGYFPLDPVF---DDEEKELDPFSCLHTEKLAICFGIISSNXYRPVHVSKNIRMCID 971

Query: 824  CHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            CHT+ K IS + GREI ++D   +HH+KDG C C D W
Sbjct: 972  CHTSAKLISKIDGREIFVKDVCFYHHMKDGICXCQDRW 1009



 Score =  196 bits (498), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 136/538 (25%), Positives = 259/538 (48%), Gaps = 34/538 (6%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           + +G ++ A+     M      P++ T + +L +C   +   LGK +H +  +  +  N 
Sbjct: 330 VQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNV 389

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  S+I +YSKCG  + A K+F    NK +   W+ MI++YVN GK  DA+ +   M +
Sbjct: 390 YVEGSVIDMYSKCGSYDYAEKVFXKAENK-NTAMWNEMIAAYVNEGKVEDALGLLRSMQK 448

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G+ P+   ++ ++   +          +   +++ G    +V     LI  F +  +  
Sbjct: 449 DGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMG-LKPNVVSFNVLISGFQQSGLSY 507

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGC-PRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           E A KVF  M   +              GC P + + L +        P+  T++G + A
Sbjct: 508 E-ALKVFRIMQSPSD-------------GCNPNEVLNLSMR-------PNPITITGALPA 546

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++L L+  GK++H + +R G   ++ V  +LVDMYAKC     +D + KVF R+   N 
Sbjct: 547 CADLNLWCQGKEIHGYTLRNGFEPNIFVSSALVDMYAKCH---DMDSANKVFFRIDGRNT 603

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW A++ GY+ +  + +EA+KLF +M+   + P+  TF  +  ACG++        ++ 
Sbjct: 604 VSWNALMAGYINN-KQPEEALKLFLEMLGEGLQPSSITFMILFPACGDIAAIRFGRGLHG 662

Query: 413 HAVK-RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
           +A K +   L + + ++LI MYA+ G + DA+  F+S  EK++  +N M+ A++ +  + 
Sbjct: 663 YAAKCQLDELKNAIXSALIDMYAKCGSILDAKSVFDSEVEKDVPLWNAMISAFSVHGMAR 722

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNAL 530
            AF +  ++E  G+     TF SLLS  +  G + +G +  ++  I  G  +    Y  +
Sbjct: 723 NAFAVFXQMELLGIXPDHITFVSLLSACARDGLVEEGWKYFNSMEISYGVAATLEHYTCM 782

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLAD 584
           + +      ++ A    ++M    +   W +++     H       RA +  +++  D
Sbjct: 783 VGILGGAGLLDEALDFIRQMPYPPDACMWATLLQACRVHSNPEIGERAAKALFELEPD 840



 Score =  161 bits (408), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 140/528 (26%), Positives = 237/528 (44%), Gaps = 62/528 (11%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTR-SKLEPNSVILNSLISLYSKCG-DLNEANKIFKSMGN 141
           LL  C     F   + +H+ + + + L+  S I N L+ LY K    L +A K+   + N
Sbjct: 89  LLNRCSTLSEF---RQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIPN 145

Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
            R + +++++I SY    +  +    F  M+  G  P++Y    +++ACS      IG +
Sbjct: 146 -RTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKM 204

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++GF+++    +SDV VG ALI  F     DL S+  VF  M E++ V WT +I+   + 
Sbjct: 205 VHGFVIR-KSVESDVFVGNALIH-FYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEE 262

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G   +A  +F  M L G  PD  + S ++S  +                R G        
Sbjct: 263 GLXDEAKHIFHLMQLDGVKPDLISWSALLSGFA----------------RNG-------- 298

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
                      +D +++   ++ +R L   V SW  II+G VQ+G  + +A+ +FS M+ 
Sbjct: 299 ----------EIDLALETLEEMPERGLQPTVNSWNGIISGCVQNGYLE-DALDMFSRMLW 347

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
               PN  T AS+L AC  L    + + ++  A K G   +  V  S+I MY++ G  + 
Sbjct: 348 YPEDPNIITIASILPACTGLKALRLGKAIHXIAXKHGIVGNVYVEGSVIDMYSKCGSYDY 407

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A K F     KN   +N M+ AY      E A  LL  ++  G      T+ ++LSG + 
Sbjct: 408 AEKVFXKAENKNTAMWNEMIAAYVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHAR 467

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
            G   +  ++ + +++ G + N   +N LIS + +      A +VF+ M+        S 
Sbjct: 468 NGLKTQAXELLSEMVQMGLKPNVVSFNVLISGFQQSGLSYEALKVFRIMQ--------SP 519

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
             G   +           ++L   ++PN IT    L AC+   L  +G
Sbjct: 520 SDGCNPN-----------EVLNLSMRPNPITITGALPACADLNLWCQG 556



 Score =  153 bits (387), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/348 (29%), Positives = 174/348 (50%), Gaps = 27/348 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+G+V+ A+  L  M + G  PD+ TY+ +L    R+        + S + +  L+PN
Sbjct: 430 YVNEGKVEDALGLLRSMQKDGWKPDVITYNTILSGHARNGLKTQAXELLSEMVQMGLKPN 489

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            V  N LIS + + G   EA K+F+ M +  D  + +                    E+L
Sbjct: 490 VVSFNVLISGFQQSGLSYEALKVFRIMQSPSDGCNPN--------------------EVL 529

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
            L   PN    +  + AC++      G  I+G+ L+ G F+ ++ V  AL+DM+ K   D
Sbjct: 530 NLSMRPNPITITGALPACADLNLWCQGKEIHGYTLRNG-FEPNIFVSSALVDMYAKCH-D 587

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++SA KVF ++  +NTV W  ++        P +A++LFL+M+  G  P   T   +  A
Sbjct: 588 MDSANKVFFRIDGRNTVSWNALMAGYINNKQPEEALKLFLEMLGEGLQPSSITFMILFPA 647

Query: 293 CSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           C ++     G+ LH +A +  L  L   +  +L+DMYAKC   GS+ D++ VFD  ++ +
Sbjct: 648 CGDIAAIRFGRGLHGYAAKCQLDELKNAIXSALIDMYAKC---GSILDAKSVFDSEVEKD 704

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           V  W A+I+ +    G  + A  +F  M    + P+H TF S+L AC 
Sbjct: 705 VPLWNAMISAF-SVHGMARNAFAVFXQMELLGIXPDHITFVSLLSACA 751



 Score =  115 bits (288), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 81/337 (24%), Positives = 161/337 (47%), Gaps = 12/337 (3%)

Query: 393 SVLKACGNLLDSNVAEQVYTHAVK-RGRALDDCVGNSLISMYARSG-RMEDARKAFESLF 450
           S+L  C  L +     Q++   VK         +GN L+ +Y ++   +EDARK  + + 
Sbjct: 88  SLLNRCSTLSE---FRQIHARVVKLNALKWKSSIGNKLVVLYCKNQWSLEDARKLLDEIP 144

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            + + +Y  ++ +Y ++   ++ F     +   G+    Y   ++L   S++     G+ 
Sbjct: 145 NRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKYLVPTILKACSAMLLXRIGKM 204

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H  +I+   ES+  + NALI  YS C ++ ++  VF  M++R+V+SWT++I+ + + G 
Sbjct: 205 VHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSMQERDVVSWTALISAYMEEGL 264

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
              A  IF+ M  DG+KP+ I++ A+LS  +  G I    +    M  E G+   +  + 
Sbjct: 265 XDEAKHIFHLMQLDGVKPDLISWSALLSGFARNGEIDLALETLEEM-PERGLQPTVNSWN 323

Query: 631 CMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
            ++    ++G L +AL+    M   P   +++   + L AC       LGK A   I  +
Sbjct: 324 GIISGCVQNGYLEDALDMFSRMLWYPEDPNIITIASILPACTGLKALRLGK-AIHXIAXK 382

Query: 688 DPQDPAAHILLS--NLYASAGHWEYVANIRKRMKERN 722
                  ++  S  ++Y+  G ++Y   +  + + +N
Sbjct: 383 HGIVGNVYVEGSVIDMYSKCGSYDYAEKVFXKAENKN 419



 Score = 49.3 bits (116), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 56/258 (21%), Positives = 107/258 (41%), Gaps = 19/258 (7%)

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMY 534
           LL    DT   +S    +  +S  +    + +  QIHAR++K +  +    I N L+ +Y
Sbjct: 67  LLPSFVDTLTNSSPTEISDSISLLNRCSTLSEFRQIHARVVKLNALKWKSSIGNKLVVLY 126

Query: 535 SRCAN---VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
             C N   +E A ++  E+ +R V ++ ++I  + +          F  M+ +G+ P+  
Sbjct: 127 --CKNQWSLEDARKLLDEIPNRTVPAYAALIRSYCRSEQWDELFSXFRLMVYEGMLPDKY 184

Query: 592 TYIAVLSACS-----HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
               +L ACS       G +  G+   +S+  +  +   + H+      LG S S+  ++
Sbjct: 185 LVPTILKACSAMLLXRIGKMVHGFVIRKSVESDVFVGNALIHFYSNCGDLGSSRSVFHSM 244

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI-LEQDPQDPAAHILLSNLYASA 705
           +         DV+ W   + A    G  +  KH   ++ L+    D  +   L + +A  
Sbjct: 245 Q-------ERDVVSWTALISAYMEEGLXDEAKHIFHLMQLDGVKPDLISWSALLSGFARN 297

Query: 706 GHWEYVANIRKRMKERNL 723
           G  +      + M ER L
Sbjct: 298 GEIDLALETLEEMPERGL 315


>gi|356507248|ref|XP_003522381.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Glycine max]
          Length = 635

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 240/651 (36%), Positives = 374/651 (57%), Gaps = 55/651 (8%)

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           +++V     LI  +V+   D++SA +VF+ M  K+TV W                     
Sbjct: 38  NNNVIASNKLIASYVRCG-DIDSAVRVFEDMKVKSTVTW--------------------- 75

Query: 273 DMILSGFL--PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
           + IL+ F   P  F  +         +LF    Q ++      ++ ++ + C    +   
Sbjct: 76  NSILAAFAKKPGHFEYAR--------QLFEKIPQPNT------VSYNIMLACHWHHL--- 118

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
                 V D+R  FD M   +V SW  +I+   Q G    EA +LFS M +     +   
Sbjct: 119 -----GVHDARGFFDSMPLKDVASWNTMISALAQVGLMG-EARRLFSAMPEKNCV-SWSA 171

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
             S   ACG+L   + A + +  A  R          ++I+ Y + GR+E A + F+ + 
Sbjct: 172 MVSGYVACGDL---DAAVECFYAAPMRSV----ITWTAMITGYMKFGRVELAERLFQEMS 224

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
            + LV++N M+  Y +N  +E    L   + +TGV  +A +  S+L G S++ A+  G+Q
Sbjct: 225 MRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQ 284

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H  + K    S+     +L+SMYS+C +++ A+++F ++  ++V+ W +MI+G+A+HG 
Sbjct: 285 VHQLVCKCPLSSDTTAGTSLVSMYSKCGDLKDAWELFIQIPRKDVVCWNAMISGYAQHGA 344

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             +AL +F +M  +G+KP+ IT++AVL AC+HAGL+  G ++F +M  + GI  + EHYA
Sbjct: 345 GKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGLVDLGVQYFNTMRRDFGIETKPEHYA 404

Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
           CMVDLLGR+G L+EA++ I+SMP      ++ T LGACR+H +  L + AA+ +LE DP 
Sbjct: 405 CMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYGTLLGACRIHKNLNLAEFAAKNLLELDPT 464

Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
               ++ L+N+YA+   W++VA+IR+ MK+ N++K  G SWIE ++ VH F   +  HP+
Sbjct: 465 IATGYVQLANVYAAQNRWDHVASIRRSMKDNNVVKIPGYSWIEINSVVHGFRSSDRLHPE 524

Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
              I+ +L  L  K+K  GY+PD  FVLH++ EE K Q L  HSEK+A+AFGL+      
Sbjct: 525 LASIHEKLKDLEKKMKLAGYVPDLEFVLHDVGEELKEQLLLWHSEKLAIAFGLLKVPLGV 584

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           PIRVFKNLRVCGDCH+A KYIS + GREI++RD+ RFHH KDG CSC DYW
Sbjct: 585 PIRVFKNLRVCGDCHSATKYISTIEGREIIVRDTTRFHHFKDGFCSCRDYW 635



 Score =  138 bits (347), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 198/388 (51%), Gaps = 38/388 (9%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           +PN+V  N +++ +     +++A   F SM  K D+ SW++MIS+    G   +A  +F 
Sbjct: 101 QPNTVSYNIMLACHWHHLGVHDARGFFDSMPLK-DVASWNTMISALAQVGLMGEARRLFS 159

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL---LKCGYFDS--DVCVGCALID 224
            M E              + C +   +  G++  G L   ++C Y      V    A+I 
Sbjct: 160 AMPE--------------KNCVSWSAMVSGYVACGDLDAAVECFYAAPMRSVITWTAMIT 205

Query: 225 MFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
            ++K G V+L  A ++F +M+ +  V W  MI    + G   D +RLF  M+ +G  P+ 
Sbjct: 206 GYMKFGRVEL--AERLFQEMSMRTLVTWNAMIAGYVENGRAEDGLRLFRTMLETGVKPNA 263

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            +L+ V+  CS L     GKQ+H    +  L+ D   G SLV MY+KC   G + D+ ++
Sbjct: 264 LSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSDTTAGTSLVSMYSKC---GDLKDAWEL 320

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--L 401
           F ++   +V+ W A+I+GY Q G   K+A++LF +M +  + P+  TF +VL AC +  L
Sbjct: 321 FIQIPRKDVVCWNAMISGYAQHGA-GKKALRLFDEMKKEGLKPDWITFVAVLLACNHAGL 379

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYN 458
           +D  V    Y + ++R   ++    +   ++ +  R+G++ +A    +S+ F+ +   Y 
Sbjct: 380 VDLGVQ---YFNTMRRDFGIETKPEHYACMVDLLGRAGKLSEAVDLIKSMPFKPHPAIYG 436

Query: 459 TMVDA--YAKNLN-SEKAFELLHEIEDT 483
           T++ A    KNLN +E A + L E++ T
Sbjct: 437 TLLGACRIHKNLNLAEFAAKNLLELDPT 464



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/147 (31%), Positives = 80/147 (54%), Gaps = 1/147 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +GR +  +     M + G  P+  + + +L  C       LGK VH L+ +  L  +
Sbjct: 238 YVENGRAEDGLRLFRTMLETGVKPNALSLTSVLLGCSNLSALQLGKQVHQLVCKCPLSSD 297

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +    SL+S+YSKCGDL +A ++F  +  ++D+V W++MIS Y   G    A+ +F EM 
Sbjct: 298 TTAGTSLVSMYSKCGDLKDAWELFIQI-PRKDVVCWNAMISGYAQHGAGKKALRLFDEMK 356

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG 199
           + G  P+   F AV+ AC++   V +G
Sbjct: 357 KEGLKPDWITFVAVLLACNHAGLVDLG 383



 Score = 57.4 bits (137), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 22/163 (13%)

Query: 520 FESNHCIY-NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH-GFAARALEI 577
           F +N+ I  N LI+ Y RC ++++A +VF++M+ ++ ++W S++  FAK  G    A ++
Sbjct: 36  FNNNNVIASNKLIASYVRCGDIDSAVRVFEDMKVKSTVTWNSILAAFAKKPGHFEYARQL 95

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME-----HYACM 632
           F K+     +PN ++Y  ++ AC         W H   ++D  G    M       +  M
Sbjct: 96  FEKI----PQPNTVSY-NIMLACH--------WHHL-GVHDARGFFDSMPLKDVASWNTM 141

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           +  L + G + EA     +MP   + + W   +      GD +
Sbjct: 142 ISALAQVGLMGEARRLFSAMP-EKNCVSWSAMVSGYVACGDLD 183


>gi|357128440|ref|XP_003565881.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39680-like [Brachypodium distachyon]
          Length = 682

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 242/664 (36%), Positives = 389/664 (58%), Gaps = 12/664 (1%)

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           G  I+  +++  +FD  V     LI  + K G + L  A ++FD M  +N V   L+++ 
Sbjct: 30  GKAIHAQMIRAAHFD--VIQHNHLIAFYGKCGRLGL--ARQMFDAMPSRNAVSGNLLMSG 85

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
               G   DA+ L   +  + F  + + LS  +SA + +  +  G+Q H +A+++GL   
Sbjct: 86  YASAGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEH 142

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
             V  +++ MY +C     V+D+ KVF+ +   ++ ++ ++I G++  G  D  ++++  
Sbjct: 143 PYVCNAVLHMYCQCA---HVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDG-SIRIVR 198

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M+      +H ++ +VL  C +  +  +  QV+  A+KR    +  VG++L+ MY +  
Sbjct: 199 SMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCD 258

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
              DA  AFE L EKN+VS+  ++ AY +N   E A +L  ++E  GV  + +T+A  L+
Sbjct: 259 CARDAHSAFEVLPEKNVVSWTAVMTAYTQNERFEDALQLFLDLEIEGVRPNEFTYAVALN 318

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + + A+  G  + A  +K+G      + NAL++MYS+  ++  A++VF  M  R+V+S
Sbjct: 319 SCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVS 378

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W S+I G+A HG A  A+ +F+ ML   I P+ +T++ VL AC+  GL+ EG  +   M 
Sbjct: 379 WNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMM 438

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            E GI    EHY CMV LL R+G L EA +FI S  +  DV+ W++ L +C+V+ +  LG
Sbjct: 439 KEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLG 498

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
              AE IL+  P D   ++LLSN+YA A  W+ V  +RK M+ER + KE G SWI+  ++
Sbjct: 499 HRVAEQILQLKPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGVRKEPGVSWIQVGSE 558

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           VH F   + +H    +I  +L +L  +IK  GY+P+   VLH++E EQK ++L  HSEK+
Sbjct: 559 VHVFTSEDKNHKWINQITIKLKELIGQIKVIGYVPNCAVVLHDVEAEQKEEHLMYHSEKM 618

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           A+AFGLI + + + IR+ KNLR+C DCH AIK IS+VT R+IV+RD+ RFH I DG CSC
Sbjct: 619 ALAFGLIHSPEGETIRIMKNLRICDDCHVAIKLISVVTRRKIVVRDTVRFHCIDDGVCSC 678

Query: 858 NDYW 861
           +DYW
Sbjct: 679 DDYW 682



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 139/531 (26%), Positives = 259/531 (48%), Gaps = 21/531 (3%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK +H+ + R+    + +  N LI+ Y KCG L  A ++F +M + R+ VS + ++S Y 
Sbjct: 30  GKAIHAQMIRAA-HFDVIQHNHLIAFYGKCGRLGLARQMFDAMPS-RNAVSGNLLMSGYA 87

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G+  DA+ +   +    F  NEY  S  + A ++  +  +G   +G+ +K G  +   
Sbjct: 88  SAGRHSDALAL---LKAADFSLNEYVLSTALSAAAHVRSYGMGRQCHGYAVKSGLQEHPY 144

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  A++ M+ +    +E A KVF+ ++  +   +  MI     LG    +IR+   M+ 
Sbjct: 145 -VCNAVLHMYCQ-CAHVEDAVKVFENVSGFDIFAFNSMINGFLDLGEFDGSIRIVRSMVG 202

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
                D  +   V+  C+  +    G Q+H+ A++  L  +V VG +LVDMY KC     
Sbjct: 203 EVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNVYVGSALVDMYGKCD---C 259

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
             D+   F+ + + NV+SWTA++T Y Q+  R ++A++LF D+    V PN FT+A  L 
Sbjct: 260 ARDAHSAFEVLPEKNVVSWTAVMTAYTQN-ERFEDALQLFLDLEIEGVRPNEFTYAVALN 318

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           +C  L        +   A+K G      V N+L++MY++SG + DA + F S+  +++VS
Sbjct: 319 SCAGLAALKNGNALSASAMKTGHWGALSVCNALMNMYSKSGSIHDAWRVFLSMPWRDVVS 378

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           +N+++  YA +  + +A  + H++    +  S  TF  +L   + +G + +G      ++
Sbjct: 379 WNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLACAQLGLVDEGLYYLNIMM 438

Query: 517 KS-GFESNHCIYNALISMYSRCANVEAAFQ-VFKEMEDRNVISWTSMITG---FAKHGFA 571
           K  G +     Y  ++ +  R   ++ A Q +       +V++W S+++    +  +G  
Sbjct: 439 KEMGIKPGREHYTCMVGLLCRAGRLDEAEQFILSNCIGTDVVAWKSLLSSCQVYKNYGLG 498

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            R  E   ++     KPN +    +LS         +G    R +  E G+
Sbjct: 499 HRVAEQILQL-----KPNDVGTYVLLSNMYAKANRWDGVVKVRKLMRERGV 544



 Score =  110 bits (276), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/249 (26%), Positives = 132/249 (53%), Gaps = 3/249 (1%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           L+ G    +I  +  M  +    D  +Y  +L  C  ++   LG  VH+   + +LE N 
Sbjct: 185 LDLGEFDGSIRIVRSMVGEVEQWDHVSYVAVLGHCASTKELLLGCQVHAQALKRRLEQNV 244

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            + ++L+ +Y KC    +A+  F+ +  K ++VSW++++++Y    +  DA+ +F+++  
Sbjct: 245 YVGSALVDMYGKCDCARDAHSAFEVLPEK-NVVSWTAVMTAYTQNERFEDALQLFLDLEI 303

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  PNE+ ++  + +C+    +  G+ +    +K G++ + + V  AL++M+ K S  +
Sbjct: 304 EGVRPNEFTYAVALNSCAGLAALKNGNALSASAMKTGHWGA-LSVCNALMNMYSK-SGSI 361

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A++VF  M  ++ V W  +I      G  R+A+ +F DM+L+  +P   T  GV+ AC
Sbjct: 362 HDAWRVFLSMPWRDVVSWNSVIIGYAHHGLAREAMCVFHDMLLAEIVPSYVTFVGVLLAC 421

Query: 294 SELELFTSG 302
           ++L L   G
Sbjct: 422 AQLGLVDEG 430


>gi|225453758|ref|XP_002270092.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 687

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 226/636 (35%), Positives = 364/636 (57%), Gaps = 10/636 (1%)

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S DL  A K+F +M   +      MI    +   P +A+ L+  M+  G   D +T   V
Sbjct: 58  SGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERGVPVDNYTYPFV 117

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC+ L     G++ H   ++ G   D+ V  +L+  Y  C   GS   +  VFD    
Sbjct: 118 LAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNC---GSFGCACDVFDESTV 174

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ-GQVAPNHFTFASVLKACGNLLDSNVAE 408
            +V++W  +I  ++  G  +K A  L  +M +   + P+  T  S++ AC  L   N+  
Sbjct: 175 RDVVTWNIMINAHLNKGLSEK-AFDLLDEMTKLDNLRPDEVTMVSLVPACAQL--GNLER 231

Query: 409 QVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             + H+  +   LD+   V N+++ MY +   +E A++ F  + EK+++S+ +M+   AK
Sbjct: 232 GKFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSMLSGLAK 291

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           +   ++A  L  +++   +     T   +LS  +  GA+ +G+ IH  I K     +  +
Sbjct: 292 SGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEINCDLVL 351

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
             AL+ MY++C +++ A QVF+ M  RNV +W ++I G A HG    A+ +F +M  D +
Sbjct: 352 ETALVDMYAKCGSIDLALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKL 411

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
            P+ +T+IA+L ACSHAGL+ EG   F++M ++  I  RMEHY C+VDLL R+  + +AL
Sbjct: 412 MPDDVTFIALLCACSHAGLVDEGLAMFQAMKNKFQIEPRMEHYGCVVDLLCRARKVDDAL 471

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            FI +MP+ A+ ++W T LGACR  G  +L +     ++E +P     +++LSNLYA   
Sbjct: 472 AFIENMPIKANSVLWATLLGACRSGGHFDLAEKIGRRVIELEPDSCGRYVMLSNLYAGVS 531

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W++   +RK+MK + + K  GCSWIE +  +H+F  G+ SH +T +IYA ++++  ++ 
Sbjct: 532 QWDHALKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEEMTRRVN 591

Query: 767 -EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
            + G++P T  VL ++EEE+K   LF HSEK+A+A GLIST    PIR+ KNLRVC DCH
Sbjct: 592 LDGGHVPGTANVLFDIEEEEKEHSLFLHSEKLAIALGLISTPSGSPIRIVKNLRVCNDCH 651

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           + +K  S V  REIV RD +RFHH K+G CSC D+W
Sbjct: 652 SFLKVTSKVYNREIVARDRSRFHHFKEGSCSCMDFW 687



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 146/529 (27%), Positives = 253/529 (47%), Gaps = 56/529 (10%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
            M ++G   D  TY  +L +C R     LG+  H  + ++    +  ++N+LI  Y  CG
Sbjct: 101 FMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCG 160

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAV 186
               A  +F      RD+V+W+ MI++++N+G    A  +  EM +L    P+E    ++
Sbjct: 161 SFGCACDVFDE-STVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSL 219

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           + AC+   N+  G  ++ +  + G  D ++ V  A++DM+ K   D+ESA +VF+++ EK
Sbjct: 220 VPACAQLGNLERGKFLHSYSKELG-LDENLRVNNAILDMYCKCD-DIESAQEVFNRIREK 277

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           + + WT M++   + G  ++A+ LF  M L+    D  TL GV+SAC++      GK +H
Sbjct: 278 DVLSWTSMLSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIH 337

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
               +  +  D+ +  +LVDMYAKC   GS+D + +VF RM   NV +W A+I G     
Sbjct: 338 LLIDKFEINCDLVLETALVDMYAKC---GSIDLALQVFRRMRVRNVFTWNALIGGLAMH- 393

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA--VKRGRALDDC 424
           G  ++A+ LF  M   ++ P+  TF ++L AC             +HA  V  G A+   
Sbjct: 394 GHGEDAISLFDQMEHDKLMPDDVTFIALLCAC-------------SHAGLVDEGLAMFQA 440

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           + N     +    RME                Y  +VD   +   + K  + L  IE+  
Sbjct: 441 MKNK----FQIEPRME---------------HYGCVVDLLCR---ARKVDDALAFIENMP 478

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-IYNALISMYSRCANVEAA 543
           +  ++  +A+LL    S G     E+I  R+I+   E + C  Y  L ++Y+  +  + A
Sbjct: 479 IKANSVLWATLLGACRSGGHFDLAEKIGRRVIE--LEPDSCGRYVMLSNLYAGVSQWDHA 536

Query: 544 FQVFKEMEDRNV-----ISW---TSMITGFAKHGFAARALEIFYKMLAD 584
            ++ K+M+++ +      SW     MI  F     +    E  Y M+ +
Sbjct: 537 LKLRKQMKNKGIEKTPGCSWIELNGMIHQFVAGDRSHLQTEQIYAMIEE 585



 Score =  175 bits (443), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 224/470 (47%), Gaps = 12/470 (2%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLY--SKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           K  H+LL R+ L  N +  + LIS    S  GDLN A K+F  M N    +  ++MI  Y
Sbjct: 28  KQAHALLLRTHLLHNPLFSSKLISFLALSHSGDLNYARKLFTQMQNPDPFIC-NTMIRGY 86

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
                  +A+ ++  M+E G   + Y +  V+ AC+    V +G   +  +LK G F SD
Sbjct: 87  ARSQNPYEAVSLYYFMVERGVPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNG-FGSD 145

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           + V  ALI  F         A  VFD+ T ++ V W +MI      G    A  L  +M 
Sbjct: 146 LFVINALIQ-FYHNCGSFGCACDVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMT 204

Query: 276 -LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            L    PD  T+  +V AC++L     GK LHS++   GL  ++ V  +++DMY KC   
Sbjct: 205 KLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDENLRVNNAILDMYCKCD-- 262

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
             ++ +++VF+R+ + +V+SWT++++G  +S G  +EA+ LF  M   ++  +  T   V
Sbjct: 263 -DIESAQEVFNRIREKDVLSWTSMLSGLAKS-GYFQEALALFQKMQLNKIELDEITLVGV 320

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           L AC      +  + ++    K     D  +  +L+ MYA+ G ++ A + F  +  +N+
Sbjct: 321 LSACAQTGALDQGKYIHLLIDKFEINCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNV 380

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHA 513
            ++N ++   A + + E A  L  ++E   +     TF +LL   S  G + +G     A
Sbjct: 381 FTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALLCACSHAGLVDEGLAMFQA 440

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMI 562
              K   E     Y  ++ +  R   V+ A    + M  + N + W +++
Sbjct: 441 MKNKFQIEPRMEHYGCVVDLLCRARKVDDALAFIENMPIKANSVLWATLL 490



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 99/335 (29%), Positives = 162/335 (48%), Gaps = 16/335 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           HLN G  +KA   LD MT+  N  PD  T   L+ +C +  N   GK +HS      L+ 
Sbjct: 187 HLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQLGNLERGKFLHSYSKELGLDE 246

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N  + N+++ +Y KC D+  A ++F  +  ++D++SW+SM+S     G   +A+ +F +M
Sbjct: 247 NLRVNNAILDMYCKCDDIESAQEVFNRI-REKDVLSWTSMLSGLAKSGYFQEALALFQKM 305

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
                  +E     V+ AC+ T  +  G  I+  L+     + D+ +  AL+DM+ K GS
Sbjct: 306 QLNKIELDEITLVGVLSACAQTGALDQGKYIH-LLIDKFEINCDLVLETALVDMYAKCGS 364

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
           +DL  A +VF +M  +N   W  +I      G   DAI LF  M     +PD  T   ++
Sbjct: 365 IDL--ALQVFRRMRVRNVFTWNALIGGLAMHGHGEDAISLFDQMEHDKLMPDDVTFIALL 422

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCV---GCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            ACS   L   G  +   A++    ++  +   GC +VD+  +      VDD+    + M
Sbjct: 423 CACSHAGLVDEGLAMFQ-AMKNKFQIEPRMEHYGC-VVDLLCRAR---KVDDALAFIENM 477

Query: 348 -LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            +  N + W A + G  +SGG    A K+   +I+
Sbjct: 478 PIKANSVLW-ATLLGACRSGGHFDLAEKIGRRVIE 511



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 86/335 (25%), Positives = 150/335 (44%), Gaps = 39/335 (11%)

Query: 427 NSLISMYA--RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           + LIS  A   SG +  ARK F  +   +    NTM+  YA++ N  +A  L + + + G
Sbjct: 47  SKLISFLALSHSGDLNYARKLFTQMQNPDPFICNTMIRGYARSQNPYEAVSLYYFMVERG 106

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           V    YT+  +L+  + +GA+  G + H  ++K+GF S+  + NALI  Y  C +   A 
Sbjct: 107 VPVDNYTYPFVLAACARLGAVKLGRRFHCEVLKNGFGSDLFVINALIQFYHNCGSFGCAC 166

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSACSHA 603
            VF E   R+V++W  MI      G + +A ++  +M   D ++P+ +T ++++ AC+  
Sbjct: 167 DVFDESTVRDVVTWNIMINAHLNKGLSEKAFDLLDEMTKLDNLRPDEVTMVSLVPACAQL 226

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDL---------------------------- 635
           G +  G K   S   E G+ + +     ++D+                            
Sbjct: 227 GNLERG-KFLHSYSKELGLDENLRVNNAILDMYCKCDDIESAQEVFNRIREKDVLSWTSM 285

Query: 636 ---LGRSGSLTEALEFIRSMPLSA---DVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
              L +SG   EAL   + M L+    D +     L AC   G  + GK+   +I + + 
Sbjct: 286 LSGLAKSGYFQEALALFQKMQLNKIELDEITLVGVLSACAQTGALDQGKYIHLLIDKFEI 345

Query: 690 Q-DPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
             D      L ++YA  G  +    + +RM+ RN+
Sbjct: 346 NCDLVLETALVDMYAKCGSIDLALQVFRRMRVRNV 380


>gi|449458990|ref|XP_004147229.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 233/649 (35%), Positives = 378/649 (58%), Gaps = 53/649 (8%)

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL-GCPRDAIRLFL 272
           SDV      I  FV+ + DLESA  VF+KM+ + TV W  M++  T++ G  ++A  LF 
Sbjct: 71  SDVVSLNKTIASFVR-ACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF- 128

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           D I     PD  + + ++  C           L S+ ++  LA                 
Sbjct: 129 DKIPE---PDSVSYN-IMLVC----------YLRSYGVKAALAF---------------- 158

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
                      F++M   ++ SW  +I+G+ Q+G   K A  LFS M +     N  +++
Sbjct: 159 -----------FNKMPVKDIASWNTLISGFAQNGQMQK-AFDLFSVMPE----KNGVSWS 202

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           +++       D   AE++Y +   +   ++     ++++ Y + G++E A + F+ +  K
Sbjct: 203 AMISGYVEHGDLEAAEELYKNVGMKSVVVE----TAMLTGYMKFGKVELAERIFQRMAVK 258

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           NLV++N+M+  Y +N  +E   ++   + ++ V  +  + +S+L G S++ A+  G Q+H
Sbjct: 259 NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMH 318

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
             + KS    +     +LISMY +C ++++A+++F EM  ++VI+W +MI+G+A+HG   
Sbjct: 319 QLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGR 378

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           +AL +F KM    +KP+ IT++AV+ AC+HAG +  G ++F+SM  E GI  +  HY C+
Sbjct: 379 KALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCV 438

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           +DLLGR+G L EA+  I+ MP +    ++ T LGACR+H + +L + AA  +L  DP   
Sbjct: 439 IDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSA 498

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
             ++ L+N+YA+   W+ VA +RK MKE N++K  G SWIE  +  H+F   +  HP+  
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
            I+ +L++L  K+K  GY+PD  F LH++EEE K + L  HSEK+A+AFGL+ T+   PI
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RVFKNLRVCGDCH AIK+IS +  REI++RD+ RFHH ++G CSC DYW
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 102/357 (28%), Positives = 169/357 (47%), Gaps = 19/357 (5%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           EP+SV  N ++  Y +   +  A   F  M  K DI SW+++IS +   G+   A  +F 
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVKAALAFFNKMPVK-DIASWNTLISGFAQNGQMQKAFDLFS 191

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            M E     N   +SA+I       ++     +Y      G     V V  A++  ++K 
Sbjct: 192 VMPE----KNGVSWSAMISGYVEHGDLEAAEELYK---NVGM--KSVVVETAMLTGYMKF 242

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G V+L  A ++F +M  KN V W  MI    +     D +++F  MI S   P+  +LS 
Sbjct: 243 GKVEL--AERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+  CS L     G+Q+H    ++ L+ D     SL+ MY KC   G +D + K+F  M 
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC---GDLDSAWKLFLEMP 357

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +V++W A+I+GY Q G   ++A+ LF  M  G + P+  TF +V+ AC +    ++  
Sbjct: 358 RKDVITWNAMISGYAQHGA-GRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGV 416

Query: 409 QVYTHAVKR-GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           Q +    K  G          +I +  R+GR+++A    + + F  +   Y T++ A
Sbjct: 417 QYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFTPHAAIYGTLLGA 473



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 209/488 (42%), Gaps = 88/488 (18%)

Query: 92  RNFHLG---------------KLVHSLLTRSKLEPN--------SVILNSLISLYSKCGD 128
           RN HLG               + +H L++ + + PN         V LN  I+ + +  D
Sbjct: 30  RNLHLGSNEESSSIASSIHPPRRIH-LVSPNNVTPNLHVDTASDVVSLNKTIASFVRACD 88

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVN-RGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           L  A  +F+ M + R  V+W++M+S Y    GK  +A  +F ++ E    P+   ++ ++
Sbjct: 89  LESARNVFEKM-SVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE----PDSVSYNIML 143

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFD----SDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
                +         YG      +F+     D+     LI  F +    ++ A+ +F  M
Sbjct: 144 VCYLRS---------YGVKAALAFFNKMPVKDIASWNTLISGFAQNG-QMQKAFDLFSVM 193

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            EKN V W+ MI+   + G    A  L+ ++             G+ S   E  + T   
Sbjct: 194 PEKNGVSWSAMISGYVEHGDLEAAEELYKNV-------------GMKSVVVETAMLTGYM 240

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           +                              G V+ + ++F RM   N+++W ++I GYV
Sbjct: 241 KF-----------------------------GKVELAERIFQRMAVKNLVTWNSMIAGYV 271

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           ++  R ++ +K+F  MI+ +V PN  + +SVL  C NL    +  Q++    K   + D 
Sbjct: 272 EN-CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDT 330

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
               SLISMY + G ++ A K F  +  K+++++N M+  YA++    KA  L  ++ + 
Sbjct: 331 TACTSLISMYCKCGDLDSAWKLFLEMPRKDVITWNAMISGYAQHGAGRKALHLFDKMRNG 390

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEA 542
            +     TF +++   +  G +  G Q    + K  G E+    Y  +I +  R   ++ 
Sbjct: 391 TMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDE 450

Query: 543 AFQVFKEM 550
           A  + KEM
Sbjct: 451 AVSLIKEM 458



 Score = 85.5 bits (210), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 78/310 (25%), Positives = 127/310 (40%), Gaps = 44/310 (14%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ + R +  +     M +    P+  + S +L  C       LG+ +H L+++S L  +
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +    SLIS+Y KCGDL+ A K+F  M  ++D+++W++MIS Y   G    A+H+F +M 
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVITWNAMISGYAQHGAGRKALHLFDKMR 388

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
                P+   F AVI AC++   V +G           YF S                  
Sbjct: 389 NGTMKPDWITFVAVILACNHAGFVDLG---------VQYFKS------------------ 421

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++  + +     E   V +T +I    + G   +A+ L  +M    F P       ++ A
Sbjct: 422 MKKEFGI-----EAKPVHYTCVIDLLGRAGRLDEAVSLIKEM---PFTPHAAIYGTLLGA 473

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C           L  +A R  L LD       V +          D   KV   M +HNV
Sbjct: 474 CR----IHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNV 529

Query: 353 MSWTAIITGY 362
           +     I GY
Sbjct: 530 VK----IPGY 535


>gi|357160830|ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Brachypodium distachyon]
          Length = 631

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 221/582 (37%), Positives = 346/582 (59%), Gaps = 4/582 (0%)

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           L D   +S  +  C++ +    GK  H  AI  GL  D      L+++Y KC   G  D 
Sbjct: 54  LIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKC---GRNDC 110

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +R VFD M   +++SW  +I GY  SG  D +A+KLFS M +     + FT +S + AC 
Sbjct: 111 ARLVFDIMHVRSIVSWNTMIAGYTHSG-EDVQALKLFSRMHREGTHMSEFTLSSTICACA 169

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
                N  +Q++T A+K     +  VG +++ +YA+   ++DA   FE + E+ LV++++
Sbjct: 170 AKYAINECKQLHTIALKLALDSNSFVGTAILDVYAKCNMIKDACWVFEKMPERTLVTWSS 229

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           +   Y +N   E+A  L    +  GV  + +T +++LS  +S+    +G Q+HA I+K G
Sbjct: 230 LFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCG 289

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F  N  +  +L+ +Y+RC  +E A+ +F  ME +NV+ W +MI  F++H  +  A+ +F 
Sbjct: 290 FHGNFFVAASLVDVYARCGQIEKAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFE 349

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           KM   GI PN +TY++VLS CSHAGL+ +G  +F  +  +  +   + HY+CMVD+LGRS
Sbjct: 350 KMQQLGIFPNEVTYLSVLSVCSHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRS 409

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G   EA E +  MP      +W + LG+CR + +  L + AAE + + +P +   H+LLS
Sbjct: 410 GKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLARIAAEQLFQLEPDNGGNHVLLS 469

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YA++G+WE V   RK +K+    KE G SWIEA  KVH F VGE  HP+  +IY +L+
Sbjct: 470 NVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKVHVFVVGERKHPRITDIYNKLE 529

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           ++  ++++F         LH++  EQK + L  HSEK+A++FGLIS   + PI + KNLR
Sbjct: 530 EIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLALSFGLISLPSNIPIIIHKNLR 589

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +CGDCH+ +K  + +T R +++RD+NRFHH KDG CSC D+W
Sbjct: 590 ICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCGDFW 631



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 199/412 (48%), Gaps = 47/412 (11%)

Query: 74  NHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           N  D+   S  L+ C + ++  +GK  H L     L  +++  N LI+LY+KCG  + A 
Sbjct: 53  NLIDVSAISQRLQLCAKRKSLLVGKSCHGLAIHFGLVTDTLTCNILINLYTKCGRNDCAR 112

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
            +F  M + R IVSW++MI+ Y + G+ V A+ +F  M   G   +E+  S+ I AC+  
Sbjct: 113 LVFDIM-HVRSIVSWNTMIAGYTHSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAK 171

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
             +     ++   LK    DS+  VG A++D++ K ++ ++ A  VF+KM E+  V W+ 
Sbjct: 172 YAINECKQLHTIALKLA-LDSNSFVGTAILDVYAKCNM-IKDACWVFEKMPERTLVTWSS 229

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           +     Q G   +A+ LF      G     FTLS ++SAC+ L L   G QLH+  ++ G
Sbjct: 230 LFAGYVQNGLHEEALHLFRCAQREGVELTEFTLSAILSACASLALKIEGIQLHAVILKCG 289

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              +  V  SLVD+YA+C   G ++ +  +F  M   NV+ W A+I  + +      EA+
Sbjct: 290 FHGNFFVAASLVDVYARC---GQIEKAYALFAYMEHKNVVIWNAMIASFSRH-AHSWEAM 345

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            LF  M Q  + PN  T+ SVL  C                                   
Sbjct: 346 ILFEKMQQLGIFPNEVTYLSVLSVC----------------------------------- 370

Query: 434 ARSGRMEDARKAFESLF-----EKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           + +G +E  R  F  L      E N++ Y+ MVD   ++  +++A+ELL+++
Sbjct: 371 SHAGLVEKGRHYFSLLMSDRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKM 422



 Score =  112 bits (279), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 176/399 (44%), Gaps = 56/399 (14%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           + G   +A+     M ++G H    T S  + +C      +  K +H++  +  L+ NS 
Sbjct: 135 HSGEDVQALKLFSRMHREGTHMSEFTLSSTICACAAKYAINECKQLHTIALKLALDSNSF 194

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +++ +Y+KC  + +A  +F+ M  +R +V+WSS+ + YV  G   +A+H+F      
Sbjct: 195 VGTAILDVYAKCNMIKDACWVFEKMP-ERTLVTWSSLFAGYVQNGLHEEALHLFRCAQRE 253

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G    E+  SA++ AC++      G  ++  +LKCG F  +  V  +L+D++ +    +E
Sbjct: 254 GVELTEFTLSAILSACASLALKIEGIQLHAVILKCG-FHGNFFVAASLVDVYARCG-QIE 311

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            AY +F  M  KN V W  MI   ++     +A+ LF  M   G  P+  T   V+S CS
Sbjct: 312 KAYALFAYMEHKNVVIWNAMIASFSRHAHSWEAMILFEKMQQLGIFPNEVTYLSVLSVCS 371

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
              L   G+   S  +                                  DR ++ NV+ 
Sbjct: 372 HAGLVEKGRHYFSLLMS---------------------------------DRTVEPNVLH 398

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL----LDSNVAEQV 410
           ++ ++    +SG  D EA +L + M      P    + S+L +C N     L    AEQ+
Sbjct: 399 YSCMVDVLGRSGKTD-EAWELLNKM---PFEPTASMWGSLLGSCRNYNNIRLARIAAEQL 454

Query: 411 YTHAVKRGRALDDCVGNSLI--SMYARSGRMED---ARK 444
           +      G       GN ++  ++YA SG  E+   ARK
Sbjct: 455 FQLEPDNG-------GNHVLLSNVYAASGNWENVLMARK 486


>gi|449480927|ref|XP_004156032.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g49710-like [Cucumis sativus]
          Length = 720

 Score =  437 bits (1123), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 243/661 (36%), Positives = 388/661 (58%), Gaps = 23/661 (3%)

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
           D +V     LI  + K S  +E A+++FD+M + ++V +  +I    + G  + A +LFL
Sbjct: 71  DCNVFSFNTLISAYAKESY-VEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQLFL 129

Query: 273 DMILSGFLPDRFTLSGVVSACS-ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           +M  +    D FTLSG+++AC   + L    +QLH+ ++ TGL   V VG +L+  Y+K 
Sbjct: 130 EMREAFLDMDGFTLSGIITACGINVGLI---RQLHALSVVTGLDSYVSVGNALITSYSK- 185

Query: 332 TVDGSVDDSRKVFDRML-DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
             +G + ++R++F  +  D + +SW +++  Y+Q     K A++L+ +M    +  + FT
Sbjct: 186 --NGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSK-ALELYLEMTVRGLIVDIFT 242

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR-MEDARKAFESL 449
            ASVL A  N+ D     Q +   +K G   +  VG+ LI +Y++ G  M D RK F+ +
Sbjct: 243 LASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGGCMLDCRKVFDEI 302

Query: 450 FEKNLVSYNTMVDAYAKNLN-SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG 508
              +LV +NTM+  Y+   + S++A E   +++  G      +   ++S  S++ +  +G
Sbjct: 303 SNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQG 362

Query: 509 EQIHARIIKSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
            Q+H   +K    SN   + NALI+MYS+C N+  A  +F  M + N +S+ SMI G+A+
Sbjct: 363 RQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYAQ 422

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG   ++L +F +ML     P  IT+I+VL+AC+H G + +G  +F  M  + GI     
Sbjct: 423 HGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMMKQKFGIEPEAG 482

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           H++CM+DLLGR+G L+EA   I ++P       W   LGACR+HG+ EL   AA  +L+ 
Sbjct: 483 HFSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANRLLQL 542

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
           DP + A +++L+N+Y+  G  +  A++RK M++R + K+ GCSWIE + ++H F   +T 
Sbjct: 543 DPLNAAPYVMLANIYSDNGRLQDAASVRKLMRDRGVKKKPGCSWIEVNRRIHIFVAEDTF 602

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFV-------LHELEEEQKVQYLFQHSEKIAVA 800
           HP   +I   L+++  KIK+ GY P+           + + EEE +   L  HSEK+AV+
Sbjct: 603 HPMIKKIQEYLEEMMRKIKKVGYTPEVRSASVGGDDRVWQREEELR---LGHHSEKLAVS 659

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGL+ST + +PI VFKNLR+C DCH AIKYIS V  REI +RDS+RFH  KDG+CSC  Y
Sbjct: 660 FGLMSTREGEPILVFKNLRICVDCHNAIKYISEVVKREITVRDSHRFHCFKDGQCSCGGY 719

Query: 861 W 861
           W
Sbjct: 720 W 720



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 149/586 (25%), Positives = 282/586 (48%), Gaps = 50/586 (8%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           L ++   LK+CI  R+   GK +H+L  +S +  ++ + N  + LYSKC  L+ A ++F 
Sbjct: 8   LHSFRQFLKTCIAHRDLRTGKSLHALYIKSFVPTSTYLSNHFLLLYSKCRRLSAARRVFD 67

Query: 138 SMGN------------------------------KRDIVSWSSMISSYVNRGKQVDAIHM 167
              +                              + D VS++++I++Y  RG    A  +
Sbjct: 68  HTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQPAFQL 127

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F+EM E     + +  S +I AC    NV +   ++   +  G  DS V VG ALI  + 
Sbjct: 128 FLEMREAFLDMDGFTLSGIITACGI--NVGLIRQLHALSVVTG-LDSYVSVGNALITSYS 184

Query: 228 KGSVDLESAYKVFDKMTE-KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
           K    L+ A ++F  ++E ++ V W  M+    Q      A+ L+L+M + G + D FTL
Sbjct: 185 KNGF-LKEARRIFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTL 243

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + V++A + ++    G Q H+  I++G   +  VG  L+D+Y+KC   G + D RKVFD 
Sbjct: 244 ASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKC--GGCMLDCRKVFDE 301

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           + + +++ W  +I+GY        EA++ F  +      P+  +   V+ AC N+   + 
Sbjct: 302 ISNPDLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQ 361

Query: 407 AEQVYTHAVKRGRALDD-CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             QV+  A+K     +   V N+LI+MY++ G + DA+  F+++ E N VSYN+M+  YA
Sbjct: 362 GRQVHGLALKLDIPSNRISVNNALIAMYSKCGNLRDAKTLFDTMPEHNTVSYNSMIAGYA 421

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----E 521
           ++    ++  L   + +     +  TF S+L+  +  G +  G +I+  ++K  F    E
Sbjct: 422 QHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDG-KIYFNMMKQKFGIEPE 480

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYK 580
           + H  ++ +I +  R   +  A ++ + +  D     W++++     HG    A++   +
Sbjct: 481 AGH--FSCMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIKAANR 538

Query: 581 MLADGIKP-NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           +L   + P N   Y+ + +  S  G + +     R +  + G+ ++
Sbjct: 539 LLQ--LDPLNAAPYVMLANIYSDNGRLQDA-ASVRKLMRDRGVKKK 581



 Score =  165 bits (418), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 219/409 (53%), Gaps = 21/409 (5%)

Query: 77  DLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           D+D ++L  ++ +C    N  L + +H+L   + L+    + N+LI+ YSK G L EA +
Sbjct: 137 DMDGFTLSGIITAC--GINVGLIRQLHALSVVTGLDSYVSVGNALITSYSKNGFLKEARR 194

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           IF  +   RD VSW+SM+ +Y+   +   A+ +++EM   G   + +  ++V+ A +N +
Sbjct: 195 IFHWLSEDRDEVSWNSMVVAYMQHREGSKALELYLEMTVRGLIVDIFTLASVLTAFTNVQ 254

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G   +  L+K GY  +   VG  LID++ K    +    KVFD+++  + V W  M
Sbjct: 255 DLLGGLQFHAKLIKSGYHQNSH-VGSGLIDLYSKCGGCMLDCRKVFDEISNPDLVLWNTM 313

Query: 255 ITRCTQLGCPRD-AIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           I+  +      D A+  F  +   G  PD  +L  V+SACS +   + G+Q+H  A++  
Sbjct: 314 ISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLD 373

Query: 314 LALD-VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           +  + + V  +L+ MY+KC   G++ D++ +FD M +HN +S+ ++I GY Q  G   ++
Sbjct: 374 IPSNRISVNNALIAMYSKC---GNLRDAKTLFDTMPEHNTVSYNSMIAGYAQH-GMGFQS 429

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGN-- 427
           + LF  M++    P + TF SVL AC   G + D     ++Y + +K+   ++   G+  
Sbjct: 430 LHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDG----KIYFNMMKQKFGIEPEAGHFS 485

Query: 428 SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFE 475
            +I +  R+G++ +A +  E++ F+     ++ ++ A   + N E A +
Sbjct: 486 CMIDLLGRAGKLSEAERLIETIPFDPGFFXWSALLGACRIHGNVELAIK 534



 Score =  102 bits (254), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 151/317 (47%), Gaps = 10/317 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           MT +G   D+ T + +L +    ++   G   H+ L +S    NS + + LI LYSKCG 
Sbjct: 231 MTVRGLIVDIFTLASVLTAFTNVQDLLGGLQFHAKLIKSGYHQNSHVGSGLIDLYSKCGG 290

Query: 129 -LNEANKIFKSMGNKRDIVSWSSMISSY-VNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
            + +  K+F  + N  D+V W++MIS Y +      +A+  F ++  +G  P++     V
Sbjct: 291 CMLDCRKVFDEISNP-DLVLWNTMISGYSLYEDLSDEALECFRQLQGVGHRPDDCSLVCV 349

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           I ACSN  + + G  ++G  LK     + + V  ALI M+ K   +L  A  +FD M E 
Sbjct: 350 ISACSNMSSPSQGRQVHGLALKLDIPSNRISVNNALIAMYSKCG-NLRDAKTLFDTMPEH 408

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK-QL 305
           NTV +  MI    Q G    ++ LF  M+   F P   T   V++AC+       GK   
Sbjct: 409 NTVSYNSMIAGYAQHGMGFQSLHLFQRMLEMDFTPTNITFISVLAACAHTGRVEDGKIYF 468

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQ 364
           +    + G+  +      ++D+  +    G + ++ ++ + +  D     W+A++ G  +
Sbjct: 469 NMMKQKFGIEPEAGHFSCMIDLLGRA---GKLSEAERLIETIPFDPGFFXWSALL-GACR 524

Query: 365 SGGRDKEAVKLFSDMIQ 381
             G  + A+K  + ++Q
Sbjct: 525 IHGNVELAIKAANRLLQ 541



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 46/156 (29%), Positives = 83/156 (53%), Gaps = 2/156 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y L +    +A+     +   G+ PD  +   ++ +C    +   G+ VH L  +  +  
Sbjct: 317 YSLYEDLSDEALECFRQLQGVGHRPDDCSLVCVISACSNMSSPSQGRQVHGLALKLDIPS 376

Query: 112 NSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           N + + N+LI++YSKCG+L +A  +F +M  + + VS++SMI+ Y   G    ++H+F  
Sbjct: 377 NRISVNNALIAMYSKCGNLRDAKTLFDTM-PEHNTVSYNSMIAGYAQHGMGFQSLHLFQR 435

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
           MLE+ F P    F +V+ AC++T  V  G I +  +
Sbjct: 436 MLEMDFTPTNITFISVLAACAHTGRVEDGKIYFNMM 471



 Score = 57.0 bits (136), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 42/174 (24%), Positives = 80/174 (45%), Gaps = 8/174 (4%)

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
           R+     + N   +N LIS Y++ + VE A Q+F EM   + +S+ ++I  +A+ G    
Sbjct: 64  RVFDHTHDCNVFSFNTLISAYAKESYVEVAHQLFDEMPQPDSVSYNTLIAAYARRGDTQP 123

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACS-HAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           A ++F +M    +  +G T   +++AC  + GLI    +   ++    G+   +     +
Sbjct: 124 AFQLFLEMREAFLDMDGFTLSGIITACGINVGLI----RQLHALSVVTGLDSYVSVGNAL 179

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
           +    ++G L EA      +    D + W + + A   H +   G  A E+ LE
Sbjct: 180 ITSYSKNGFLKEARRIFHWLSEDRDEVSWNSMVVAYMQHRE---GSKALELYLE 230


>gi|297737088|emb|CBI26289.3| unnamed protein product [Vitis vinifera]
          Length = 668

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/633 (36%), Positives = 364/633 (57%), Gaps = 53/633 (8%)

Query: 236 AYKVFDKMTEKNTVGWTL--MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           A+++F +    +   + L  +I   +  G  R+AI L++ M++ G  P+ +T   V+S C
Sbjct: 82  AFELFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGC 141

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           +++  F  G Q+H   ++ GL  DV +   L+  YA+C   G +D   KVF+ M + NV+
Sbjct: 142 TKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAEC---GHMDHGHKVFEGMSERNVV 198

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           SWT++I GY + G R KEAV LF +M                                  
Sbjct: 199 SWTSLICGYAR-GDRPKEAVSLFFEM---------------------------------- 223

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
                  L+  + N+L+ MY + G ++ A++ F+   ++NLV YNT++  YA+   + +A
Sbjct: 224 -------LNKVMVNALVDMYMKCGAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREA 276

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSI-----GAIGKGEQIHARIIKSGFESNHCIYN 528
             +L E+   G      T  S +S ++ +     G +  G  +H  I K+G   +  +  
Sbjct: 277 LAILDEMLQQGPRPDRVTMLSAISASAQLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNT 336

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ M++RC + ++A QVF +M +R+V +WT+ I   A  G    A  +F +ML  G+KP
Sbjct: 337 ALVDMFARCGDPQSAMQVFNKMTERDVSAWTAAIGTMAMEGNGEGATGLFNQMLIQGVKP 396

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + + ++ VL+ACSH G + +G  H  S+ ++HGI  ++EHY CMVDLLGR+G L EA + 
Sbjct: 397 DVVLFVQVLTACSHGGQVEQGL-HIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDL 455

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+SMP+  + +VW + L ACRVH + E+  +AAE I E  PQ    H+LLSN+YASAG W
Sbjct: 456 IKSMPMEPNDVVWGSLLAACRVHKNVEMATYAAERINELAPQRAGVHVLLSNIYASAGKW 515

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             VA +R  ++E+ + K  G S ++ +  +H+F  G+ SHP+   I   L ++  +  + 
Sbjct: 516 TDVARVRLNLREKGVRKVPGSSSVQVNGVIHEFTSGDESHPEMTHIALMLQEMNCRFSDA 575

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           G++PD + VL +++E++K   L +HSEK+A+AFGLI+T +S PIRV KNLR+C DCH+  
Sbjct: 576 GHIPDLSNVLLDVDEQEKEYLLSRHSEKLAIAFGLIATGRSMPIRVVKNLRMCSDCHSFA 635

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K  S++  REI++RD+NRFH  + G CSC DYW
Sbjct: 636 KMASIIYNREIIVRDNNRFHFFRQGLCSCCDYW 668



 Score =  142 bits (357), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/384 (27%), Positives = 169/384 (44%), Gaps = 56/384 (14%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF-----DRMLDHNVMSWTA 357
           KQLH    + GL         LV+  A+     S+D +RK F     D   D  +    +
Sbjct: 42  KQLHCQITKNGLDQIPSTLTKLVNAGAEIASPESLDYARKAFELFKEDVRSDDALFMLNS 101

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +I GY  S G  +EA+ L+  M+   V PNH+TF  VL  C  +       QV+   VK 
Sbjct: 102 LIRGY-SSAGLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKM 160

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G   D  + N LI  YA  G M+   K FE + E+N+VS+ +++  YA+    ++A  L 
Sbjct: 161 GLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSERNVVSWTSLICGYARGDRPKEAVSLF 220

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
            E+                                          N  + NAL+ MY +C
Sbjct: 221 FEM-----------------------------------------LNKVMVNALVDMYMKC 239

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             ++AA ++F E  DRN++ + ++++ +A+ G A  AL I  +ML  G +P+ +T ++ +
Sbjct: 240 GAIDAAKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAI 299

Query: 598 SACSHA-----GLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           SA +       G +  G W H  +  +++GI   M     +VD+  R G    A++    
Sbjct: 300 SASAQLVDLFYGKVCHGYWVH--TYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNK 357

Query: 652 MPLSADVLVWRTFLGACRVHGDTE 675
           M    DV  W   +G   + G+ E
Sbjct: 358 MT-ERDVSAWTAAIGTMAMEGNGE 380



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 109/426 (25%), Positives = 203/426 (47%), Gaps = 60/426 (14%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++AI     M   G  P+  T+  +L  C +   F  G  VH  + +  LE +  I 
Sbjct: 110 GLGREAILLYVRMLVLGVTPNHYTFPFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQ 169

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI  Y++CG ++  +K+F+ M ++R++VSW+S+I  Y    +  +A+ +F EML    
Sbjct: 170 NCLIHFYAECGHMDHGHKVFEGM-SERNVVSWTSLICGYARGDRPKEAVSLFFEML---- 224

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
                                                + V V  AL+DM++K G++D  +
Sbjct: 225 -------------------------------------NKVMVN-ALVDMYMKCGAID--A 244

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
           A ++FD+  ++N V +  +++   + G  R+A+ +  +M+  G  PDR T+   +SA ++
Sbjct: 245 AKRLFDECVDRNLVLYNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASAQ 304

Query: 296 LELFTSGKQLHSWAIRT-----GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           L     GK  H + + T     G+  D+ +  +LVDM+A+C   G    + +VF++M + 
Sbjct: 305 LVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARC---GDPQSAMQVFNKMTER 361

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V +WTA I G +   G  + A  LF+ M+   V P+   F  VL AC +     V + +
Sbjct: 362 DVSAWTAAI-GTMAMEGNGEGATGLFNQMLIQGVKPDVVLFVQVLTACSH--GGQVEQGL 418

Query: 411 YTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKN 467
           +  ++     +   + +   ++ +  R+G + +A    +S+  E N V + +++ A   +
Sbjct: 419 HIFSLMEDHGISPQIEHYGCMVDLLGRAGLLREAFDLIKSMPMEPNDVVWGSLLAACRVH 478

Query: 468 LNSEKA 473
            N E A
Sbjct: 479 KNVEMA 484



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 140/300 (46%), Gaps = 27/300 (9%)

Query: 439 MEDARKAFESLFEKNLVS------YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           ++ ARKAFE LF++++ S       N+++  Y+      +A  L   +   GV  + YTF
Sbjct: 76  LDYARKAFE-LFKEDVRSDDALFMLNSLIRGYSSAGLGREAILLYVRMLVLGVTPNHYTF 134

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
             +LSG + I A  +G Q+H  ++K G E +  I N LI  Y+ C +++   +VF+ M +
Sbjct: 135 PFVLSGCTKIAAFCEGIQVHGSVVKMGLEEDVFIQNCLIHFYAECGHMDHGHKVFEGMSE 194

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           RNV+SWTS+I G+A+      A+ +F++ML      N +   A++      G I    + 
Sbjct: 195 RNVVSWTSLICGYARGDRPKEAVSLFFEML------NKVMVNALVDMYMKCGAIDAAKRL 248

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA---DVLVWRTFLGACR 669
           F    D + ++     Y  ++    R G   EAL  +  M       D +   + + A  
Sbjct: 249 FDECVDRNLVL-----YNTILSNYARQGLAREALAILDEMLQQGPRPDRVTMLSAISASA 303

Query: 670 VHGDTELGK----HAAEMILEQD--PQDPAAHILLSNLYASAGHWEYVANIRKRMKERNL 723
              D   GK    +     +E++  P D   +  L +++A  G  +    +  +M ER++
Sbjct: 304 QLVDLFYGKVCHGYWVHTYIEKNGIPCDMRLNTALVDMFARCGDPQSAMQVFNKMTERDV 363


>gi|359495515|ref|XP_002265720.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25060, mitochondrial-like [Vitis vinifera]
          Length = 678

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/629 (36%), Positives = 365/629 (58%), Gaps = 5/629 (0%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +ESA +VFDK  +     W  MI   ++ G   +A+ L+  M   G  PD  T + V+ A
Sbjct: 55  IESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKA 114

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+      SG++    A+  G   DV VG +++++YAKC   G +D++ +VFD+M   ++
Sbjct: 115 CTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKC---GKMDEAMRVFDKMGRRDL 171

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           + WT +ITG  Q+G + +EAV ++  M + +V  +      +++AC  L  S +   ++ 
Sbjct: 172 VCWTTMITGLAQNG-QAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHG 230

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           + +++   +D  V  SL+ MYA++G +E A   F  +  KN++S++ ++  +A+N  +  
Sbjct: 231 YMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRMLYKNVISWSALISGFAQNGFAGN 290

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A +L+ +++  G    + +  S+L   S +G +  G+ +H  I++     +     A+I 
Sbjct: 291 ALQLVVDMQSFGYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVID 349

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MYS+C ++  A  VF ++  R+ ISW ++I  +  HG    AL +F +M    +KP+  T
Sbjct: 350 MYSKCGSLSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHAT 409

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           + ++LSA SH+GL+ +G   F  M +E+ I    +HYACMVDLL R+G + EA E I SM
Sbjct: 410 FASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESM 469

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
                + +W   L  C  HG   +G+ AA+ +LE +P DP  + L+SN +A+A  W+ VA
Sbjct: 470 ITEPGIAIWVALLSGCLNHGKFLIGEMAAKKVLELNPDDPGIYSLVSNFFATARRWDEVA 529

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +RK MK+  + K  G S +E + K+H F + + SH +  EI   L +L  ++K  GY+P
Sbjct: 530 EVRKIMKKTGMKKVPGYSVMEVNGKLHAFLMEDKSHHQYEEIMQVLGKLDYEMKAMGYVP 589

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
            T FVLH LEEE K + L  HSE++A+AFGL++T     + + KNLRVCGDCH A K+IS
Sbjct: 590 KTEFVLHNLEEEVKERMLCNHSERLAIAFGLLNTGPGTRLLITKNLRVCGDCHEATKFIS 649

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +  REIV+RD  RFHH KDG CSC DYW
Sbjct: 650 KIVNREIVVRDVKRFHHFKDGVCSCGDYW 678



 Score =  206 bits (525), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 136/473 (28%), Positives = 249/473 (52%), Gaps = 12/473 (2%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H+L+  + +  +      LI  Y++ G +  A ++F     +  + +W++MI +Y  RG
Sbjct: 26  IHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDK-SPQCGVDAWNAMIIAYSRRG 84

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A+ ++  M   G  P+   ++ V++AC+ + ++  G   +   +  GY D DV VG
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGD-DVFVG 143

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
            A+++++ K    ++ A +VFDKM  ++ V WT MIT   Q G  R+A+ ++  M     
Sbjct: 144 AAVLNLYAKCG-KMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRV 202

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
             D   + G++ AC+ L     G  +H + IR  + +DV V  SLVDMYAK   +G ++ 
Sbjct: 203 EGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAK---NGHLEL 259

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +  VF RML  NV+SW+A+I+G+ Q+G     A++L  DM      P+  +  SVL AC 
Sbjct: 260 ASCVFRRMLYKNVISWSALISGFAQNGFAG-NALQLVVDMQSFGYKPDSVSLVSVLLACS 318

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMYARSGRMEDARKAFESLFEKNLVSYN 458
            +    + + V+ + V+R     DCV ++ +I MY++ G +  AR  F+ +  ++ +S+N
Sbjct: 319 QVGFLKLGKSVHGYIVRRLHF--DCVSSTAVIDMYSKCGSLSFARTVFDQISFRDSISWN 376

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            ++ +Y  + + E+A  L  ++ +T V     TFASLLS  S  G + KG    + ++  
Sbjct: 377 AIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNE 436

Query: 519 -GFESNHCIYNALISMYSRCANVEAAFQVFKEM-EDRNVISWTSMITGFAKHG 569
              + +   Y  ++ + SR   VE A ++ + M  +  +  W ++++G   HG
Sbjct: 437 YKIQPSEKHYACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHG 489



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/415 (29%), Positives = 218/415 (52%), Gaps = 35/415 (8%)

Query: 50  LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
           +I +   G + +A+     M  +G  PD  TY+++LK+C RS +   G+           
Sbjct: 77  IIAYSRRGAMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGY 136

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +  +  ++++LY+KCG ++EA ++F  MG +RD+V W++MI+     G+  +A+ ++ 
Sbjct: 137 GDDVFVGAAVLNLYAKCGKMDEAMRVFDKMG-RRDLVCWTTMITGLAQNGQAREAVDIYR 195

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           +M +     +      +I+AC+   +  +G  I+G++++      DV V  +L+DM+ K 
Sbjct: 196 QMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDII-MDVIVQTSLVDMYAKN 254

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
              LE A  VF +M  KN + W+ +I+   Q G   +A++L +DM   G+ PD  +L  V
Sbjct: 255 G-HLELASCVFRRMLYKNVISWSALISGFAQNGFAGNALQLVVDMQSFGYKPDSVSLVSV 313

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + ACS++     GK +H + +R  L  D     +++DMY+KC   GS+  +R VFD++  
Sbjct: 314 LLACSQVGFLKLGKSVHGYIVRR-LHFDCVSSTAVIDMYSKC---GSLSFARTVFDQISF 369

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            + +SW AII  Y    G  +EA+ LF  M +  V P+H TFAS+L A            
Sbjct: 370 RDSISWNAIIASY-GIHGSGEEALSLFLQMRETNVKPDHATFASLLSA------------ 416

Query: 410 VYTHA--VKRGRALDDCVGNS------------LISMYARSGRMEDARKAFESLF 450
            ++H+  V++GR     + N             ++ + +R+GR+E+A++  ES+ 
Sbjct: 417 -FSHSGLVEKGRYWFSIMVNEYKIQPSEKHYACMVDLLSRAGRVEEAQELIESMI 470



 Score =  111 bits (278), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 80/320 (25%), Positives = 165/320 (51%), Gaps = 21/320 (6%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+ ++A+     M +K    D      L+++C    +  +G  +H  + R  +  + +
Sbjct: 183 QNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVI 242

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  SL+ +Y+K G L  A+ +F+ M  K +++SWS++IS +   G   +A+ + V+M   
Sbjct: 243 VQTSLVDMYAKNGHLELASCVFRRMLYK-NVISWSALISGFAQNGFAGNALQLVVDMQSF 301

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV-GCALIDMFVK-GSVD 232
           G+ P+     +V+ ACS    + +G  ++G++++  +FD   CV   A+IDM+ K GS  
Sbjct: 302 GYKPDSVSLVSVLLACSQVGFLKLGKSVHGYIVRRLHFD---CVSSTAVIDMYSKCGS-- 356

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VFD+++ ++++ W  +I      G   +A+ LFL M  +   PD  T + ++SA
Sbjct: 357 LSFARTVFDQISFRDSISWNAIIASYGIHGSGEEALSLFLQMRETNVKPDHATFASLLSA 416

Query: 293 CSELELFTSGK-----QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            S   L   G+      ++ + I+       C    +VD+ ++    G V++++++ + M
Sbjct: 417 FSHSGLVEKGRYWFSIMVNEYKIQPSEKHYAC----MVDLLSRA---GRVEEAQELIESM 469

Query: 348 L-DHNVMSWTAIITGYVQSG 366
           + +  +  W A+++G +  G
Sbjct: 470 ITEPGIAIWVALLSGCLNHG 489



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 126/249 (50%), Gaps = 17/249 (6%)

Query: 426 GNS---LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
           GNS   LI  YAR G +E AR+ F+   +  + ++N M+ AY++     +A  L H +  
Sbjct: 39  GNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRGAMFEALSLYHRMAS 98

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            GV   + T+  +L   +    +  GE+   + +  G+  +  +  A++++Y++C  ++ 
Sbjct: 99  EGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGAAVLNLYAKCGKMDE 158

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A +VF +M  R+++ WT+MITG A++G A  A++I+ +M    ++ +G+  + ++ AC+ 
Sbjct: 159 AMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEGDGVVMLGLIQACTT 218

Query: 603 AGLISEGWKHFRSMYDEHG------IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
            G       H +     HG      I+  +     +VD+  ++G L  A    R M L  
Sbjct: 219 LG-------HSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVFRRM-LYK 270

Query: 657 DVLVWRTFL 665
           +V+ W   +
Sbjct: 271 NVISWSALI 279



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 69/299 (23%), Positives = 127/299 (42%), Gaps = 50/299 (16%)

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           +IHA +I +G   +      LI  Y+R  ++E+A QVF +     V +W +MI  +++ G
Sbjct: 25  KIHALMILTGIFGHGNSNAKLIQSYARLGHIESARQVFDKSPQCGVDAWNAMIIAYSRRG 84

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE---------- 619
               AL ++++M ++G++P+  TY  VL AC+ +  +  G + +R   D+          
Sbjct: 85  AMFEALSLYHRMASEGVRPDSSTYTVVLKACTRSLDLRSGEETWRQAVDQGYGDDVFVGA 144

Query: 620 -----HGIVQRMEHYACMVDLLGR---------------SGSLTEALEFIRSM---PLSA 656
                +    +M+    + D +GR               +G   EA++  R M    +  
Sbjct: 145 AVLNLYAKCGKMDEAMRVFDKMGRRDLVCWTTMITGLAQNGQAREAVDIYRQMHKKRVEG 204

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQD-PQDPAAHILLSNLYASAGHWEYVANIR 715
           D +V    + AC   G +++G      ++ +D   D      L ++YA  GH E  + + 
Sbjct: 205 DGVVMLGLIQACTTLGHSKMGLSIHGYMIRKDIIMDVIVQTSLVDMYAKNGHLELASCVF 264

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           +RM  +N+I  +      A N                       QL + ++ FGY PD+
Sbjct: 265 RRMLYKNVISWSALISGFAQNG----------------FAGNALQLVVDMQSFGYKPDS 307



 Score = 39.3 bits (90), Expect = 8.8,   Method: Compositional matrix adjust.
 Identities = 26/105 (24%), Positives = 51/105 (48%), Gaps = 1/105 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVI 115
           G  ++A+     M +    PD  T++ LL +   S     G+   S++    K++P+   
Sbjct: 386 GSGEEALSLFLQMRETNVKPDHATFASLLSAFSHSGLVEKGRYWFSIMVNEYKIQPSEKH 445

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
              ++ L S+ G + EA ++ +SM  +  I  W +++S  +N GK
Sbjct: 446 YACMVDLLSRAGRVEEAQELIESMITEPGIAIWVALLSGCLNHGK 490


>gi|449462994|ref|XP_004149219.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
 gi|449500964|ref|XP_004161240.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Cucumis sativus]
          Length = 624

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 212/559 (37%), Positives = 342/559 (61%), Gaps = 4/559 (0%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+     G   ++ V   L+ MY +    G+++D++++FD M   +  SW+ I+ GY
Sbjct: 70  RQVHAQIATNGAFRNLAVANKLLYMYVE---RGALEDAQELFDGMSKRHPYSWSVIVGGY 126

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            + G        +F ++++     + ++   V++AC +L D      ++   +K G    
Sbjct: 127 AKVGNF-FSCFWMFRELLRSGAPLDDYSAPVVIRACRDLKDLKCGRLIHCITLKCGLDYG 185

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  +L+ MYAR   +EDA + F  +++++L ++  M+ A A++    ++      + +
Sbjct: 186 HFVCATLVDMYARCKVVEDAHQIFVKMWKRDLATWTVMIGALAESGVPVESLVFFDRMRN 245

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G+        +++   + +GA+ K + IHA I  +G+  +  +  A+I MY++C +VE+
Sbjct: 246 QGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTAMIDMYAKCGSVES 305

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  +F  M+ RNVI+W++MI  +  HG   +ALE+F  ML  GI PN IT++++L ACSH
Sbjct: 306 ARWIFDRMQVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILPNRITFVSLLYACSH 365

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           AGLI EG + F SM+DE+G+   ++HY CMVDLLGR+G L EALE I  MP+  D ++W 
Sbjct: 366 AGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAGRLDEALEMIEGMPVEKDEVLWG 425

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             LGACR+H   +L +  A  +L+   Q P  ++LLSN+YA+AG WE +A  R  M +  
Sbjct: 426 ALLGACRIHRHLDLAERVARSLLKLQSQKPGHYVLLSNIYANAGKWEDMAKTRDLMTKGG 485

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           L K  G +WIE   K+++F VG+ +HP++ EIY  L +L  K++  GY PDTN VL++++
Sbjct: 486 LRKIPGRTWIEVGEKLYQFGVGDKTHPRSNEIYKMLKRLGEKLEVAGYHPDTNDVLYDVD 545

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE K   L+ HSEK+A+AFGL+   +  PIR+ KNLRVCGDCHT  K++S++  + I++R
Sbjct: 546 EEVKQGLLYSHSEKLAIAFGLLVLPQGHPIRITKNLRVCGDCHTFCKFVSLIEQKTIIVR 605

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D+ RFHH K+G CSC DYW
Sbjct: 606 DAKRFHHFKEGVCSCRDYW 624



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/391 (31%), Positives = 207/391 (52%), Gaps = 12/391 (3%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           H D   +   L SC   RN    + VH+ +  +    N  + N L+ +Y + G L +A +
Sbjct: 50  HYDTKRFRSSLLSC---RNLFQVRQVHAQIATNGAFRNLAVANKLLYMYVERGALEDAQE 106

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F  M +KR   SWS ++  Y   G       MF E+L  G   ++Y    VIRAC + +
Sbjct: 107 LFDGM-SKRHPYSWSVIVGGYAKVGNFFSCFWMFRELLRSGAPLDDYSAPVVIRACRDLK 165

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
           ++  G +I+   LKCG  D    V   L+DM+ +  V +E A+++F KM +++   WT+M
Sbjct: 166 DLKCGRLIHCITLKCG-LDYGHFVCATLVDMYARCKV-VEDAHQIFVKMWKRDLATWTVM 223

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I    + G P +++  F  M   G +PD+  L  VV AC++L      K +H++   TG 
Sbjct: 224 IGALAESGVPVESLVFFDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGY 283

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           +LDV +G +++DMYAKC   GSV+ +R +FDRM   NV++W+A+I  Y   G  +K A++
Sbjct: 284 SLDVILGTAMIDMYAKC---GSVESARWIFDRMQVRNVITWSAMIAAYGYHGQGEK-ALE 339

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV-KRGRALDDCVGNSLISMY 433
           LF  M++  + PN  TF S+L AC +       ++ ++    + G   D      ++ + 
Sbjct: 340 LFPMMLRSGILPNRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLL 399

Query: 434 ARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            R+GR+++A +  E +  EK+ V +  ++ A
Sbjct: 400 GRAGRLDEALEMIEGMPVEKDEVLWGALLGA 430



 Score = 76.3 bits (186), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 97/201 (48%), Gaps = 4/201 (1%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           V+  +F  D M  +G  PD      ++ +C +    +  K +H+ +  +    + ++  +
Sbjct: 234 VESLVF-FDRMRNQGIVPDKVALVTVVYACAKLGAMNKAKAIHAYINGTGYSLDVILGTA 292

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           +I +Y+KCG +  A  IF  M   R++++WS+MI++Y   G+   A+ +F  ML  G  P
Sbjct: 293 MIDMYAKCGSVESARWIFDRM-QVRNVITWSAMIAAYGYHGQGEKALELFPMMLRSGILP 351

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           N   F +++ ACS+   +  G   +  +        DV     ++D+  +    L+ A +
Sbjct: 352 NRITFVSLLYACSHAGLIEEGQRFFSSMWDEYGVTPDVKHYTCMVDLLGRAG-RLDEALE 410

Query: 239 VFDKM-TEKNTVGWTLMITRC 258
           + + M  EK+ V W  ++  C
Sbjct: 411 MIEGMPVEKDEVLWGALLGAC 431


>gi|225425668|ref|XP_002269694.1| PREDICTED: pentatricopeptide repeat-containing protein At2g02980
           [Vitis vinifera]
 gi|296086362|emb|CBI31951.3| unnamed protein product [Vitis vinifera]
          Length = 595

 Score =  436 bits (1122), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 216/560 (38%), Positives = 342/560 (61%), Gaps = 2/560 (0%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQL ++AI+T L  D+ V    ++  +      S+  +  +FD++   +++ +  +  GY
Sbjct: 37  KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQIPQPDIVLFNTMARGY 96

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            ++    + A  LF+ ++   + P+ +TF S+LKAC +        Q++  A+K G + +
Sbjct: 97  ARTDTPLR-AFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSEN 155

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  +LI+MY     M+ AR+ F+ ++E  +V+YN M+  YA+     +A  L  E++ 
Sbjct: 156 VYVCPTLINMYTACNEMDCARRVFDKIWEPCVVTYNAMITGYARGSRPNEALSLFRELQA 215

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             +  +  T  S+LS  + +GA+  G+ +H  + K+GF     +  ALI MY++C +++ 
Sbjct: 216 RNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKVDTALIDMYAKCGSLDD 275

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  VF+ M  R+  +W++MI  +A HG   +A+ +F +M   G +P+ IT++ +L ACSH
Sbjct: 276 AVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYACSH 335

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
            GL+ EG+++F  M D++G++  ++HY CMVDLLGR+G L EA EFI  +P+    ++WR
Sbjct: 336 TGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRLEEAYEFIVGLPIRPTPILWR 395

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
           T L AC  HG+ ELGK   E I E D      +I+LSNL A AG WE V  +RK M ER 
Sbjct: 396 TLLSACGSHGNVELGKRVIEQIFELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERG 455

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH-EL 781
           ++K  GCS +E +N VH+F  G+  H  + +++  LD+L  ++K  GY+P+T+ V H ++
Sbjct: 456 VVKIPGCSSVEVNNVVHEFFSGDGVHSVSTKLHQALDELVKELKLVGYVPNTSLVFHADM 515

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           E+E+K   L  HSEK+A+ FGL++T     IRV KNLRVCGDCH+A K IS++  R+I+L
Sbjct: 516 EDEEKEVTLRYHSEKLAITFGLLNTPPGTTIRVVKNLRVCGDCHSAAKLISLIFDRQIIL 575

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD  RFHH KDGKCSC DYW
Sbjct: 576 RDVQRFHHFKDGKCSCEDYW 595



 Score =  165 bits (417), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/400 (27%), Positives = 198/400 (49%), Gaps = 14/400 (3%)

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           +  ++ A+ +FD++ + + V +  M     +   P  A  LF  ++ SG  PD +T   +
Sbjct: 68  TTSMQHAHHLFDQIPQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSL 127

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + AC+  +    G+QLH  AI+ GL+ +V V  +L++MY  C     +D +R+VFD++ +
Sbjct: 128 LKACASCKALEEGRQLHCLAIKLGLSENVYVCPTLINMYTACN---EMDCARRVFDKIWE 184

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             V+++ A+ITGY + G R  EA+ LF ++    + P   T  SVL +C  L   ++ + 
Sbjct: 185 PCVVTYNAMITGYAR-GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKW 243

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++ +  K G      V  +LI MYA+ G ++DA   FE++  ++  +++ M+ AYA + +
Sbjct: 244 MHEYVKKNGFNRFVKVDTALIDMYAKCGSLDDAVCVFENMAVRDTQAWSAMIMAYAIHGH 303

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYN 528
             KA  L  E+   G      TF  LL   S  G + +G E  +    K G       Y 
Sbjct: 304 GLKAVSLFKEMRKAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYG 363

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNV-ISWTSMITGFAKHG---FAARALEIFYKMLAD 584
            ++ +  R   +E A++    +  R   I W ++++    HG      R +E  ++ L D
Sbjct: 364 CMVDLLGRAGRLEEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFE-LDD 422

Query: 585 GIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
               +G  YI + + C+ AG   E   + R + +E G+V+
Sbjct: 423 S---HGGDYIILSNLCARAGRW-EDVNYVRKLMNERGVVK 458



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 194/411 (47%), Gaps = 18/411 (4%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI---SLYSKCGDLNEANKIFKSMG 140
           LL  C   R     K + +   ++ L  +  +L   I   SL      +  A+ +F  + 
Sbjct: 26  LLPKCTSLREL---KQLQAFAIKTHLHSDLSVLTKFINFCSLNPTTTSMQHAHHLFDQI- 81

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            + DIV +++M   Y      + A  +F ++L  G  P++Y F ++++AC++ + +  G 
Sbjct: 82  PQPDIVLFNTMARGYARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGR 141

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++   +K G    +V V   LI+M+   + +++ A +VFDK+ E   V +  MIT   +
Sbjct: 142 QLHCLAIKLG-LSENVYVCPTLINMYTACN-EMDCARRVFDKIWEPCVVTYNAMITGYAR 199

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
              P +A+ LF ++      P   T+  V+S+C+ L     GK +H +  + G    V V
Sbjct: 200 GSRPNEALSLFRELQARNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNGFNRFVKV 259

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             +L+DMYAKC   GS+DD+  VF+ M   +  +W+A+I  Y    G   +AV LF +M 
Sbjct: 260 DTALIDMYAKC---GSLDDAVCVFENMAVRDTQAWSAMIMAYAIH-GHGLKAVSLFKEMR 315

Query: 381 QGQVAPNHFTFASVLKACGNL-LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
           +    P+  TF  +L AC +  L     E  Y    K G          ++ +  R+GR+
Sbjct: 316 KAGTEPDEITFLGLLYACSHTGLVEEGFEYFYGMRDKYGVIPGIKHYGCMVDLLGRAGRL 375

Query: 440 EDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE---KAFELLHEIEDTGVG 486
           E+A +    L      + + T++ A   + N E   +  E + E++D+  G
Sbjct: 376 EEAYEFIVGLPIRPTPILWRTLLSACGSHGNVELGKRVIEQIFELDDSHGG 426



 Score =  106 bits (265), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 180/410 (43%), Gaps = 60/410 (14%)

Query: 57  GRVQKAIFTLDLMTQ---KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
            R    +    L TQ    G  PD  T+  LLK+C   +    G+ +H L  +  L  N 
Sbjct: 97  ARTDTPLRAFTLFTQILFSGLFPDDYTFPSLLKACASCKALEEGRQLHCLAIKLGLSENV 156

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  +LI++Y+ C +++ A ++F  +     +V++++MI+ Y    +  +A+ +F E+  
Sbjct: 157 YVCPTLINMYTACNEMDCARRVFDKIWEP-CVVTYNAMITGYARGSRPNEALSLFRELQA 215

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD 232
               P +    +V+ +C+    + +G  ++ ++ K G F+  V V  ALIDM+ K GS+D
Sbjct: 216 RNLKPTDVTMLSVLSSCALLGALDLGKWMHEYVKKNG-FNRFVKVDTALIDMYAKCGSLD 274

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
              A  VF+ M  ++T  W+ MI      G    A+ LF +M  +G  PD  T  G++ A
Sbjct: 275 --DAVCVFENMAVRDTQAWSAMIMAYAIHGHGLKAVSLFKEMRKAGTEPDEITFLGLLYA 332

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS   L   G + + + +R              D Y        V    K +  M+D   
Sbjct: 333 CSHTGLVEEGFE-YFYGMR--------------DKYG-------VIPGIKHYGCMVD--- 367

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN----LLDSNVAE 408
                     +   GR +EA +    +    + P    + ++L ACG+     L   V E
Sbjct: 368 ---------LLGRAGRLEEAYEFIVGL---PIRPTPILWRTLLSACGSHGNVELGKRVIE 415

Query: 409 QVYTHAVKRGRALDDCVGNSLI---SMYARSGRMEDARKAFESLFEKNLV 455
           Q++         LDD  G   I   ++ AR+GR ED     + + E+ +V
Sbjct: 416 QIF--------ELDDSHGGDYIILSNLCARAGRWEDVNYVRKLMNERGVV 457


>gi|356529928|ref|XP_003533538.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 690

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 227/599 (37%), Positives = 362/599 (60%), Gaps = 7/599 (1%)

Query: 265 RDAIRLF--LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           R+A+ LF  L++   GF     T   +VSAC  L      K++ ++ + +G   D+ V  
Sbjct: 97  REAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLYVMN 156

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
            ++ ++ KC   G + D+RK+FD M + ++ SW  +I G+V SG    EA  LF  M + 
Sbjct: 157 RVLFVHVKC---GLMLDARKLFDEMPEKDMASWMTMIGGFVDSGNFS-EAFGLFLCMWEE 212

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
                  TF ++++A   L    V  Q+++ A+KRG   D  V  +LI MY++ G +EDA
Sbjct: 213 FNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDTFVSCALIDMYSKCGSIEDA 272

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              F+ + EK  V +N+++ +YA +  SE+A    +E+ D+G     +T + ++   + +
Sbjct: 273 HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRICARL 332

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            ++   +Q HA +++ G++++     AL+  YS+   +E A+ VF  M  +NVISW ++I
Sbjct: 333 ASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKWGRMEDAWHVFNRMRRKNVISWNALI 392

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            G+  HG    A+E+F +ML +G+ PN +T++AVLSACS++GL   GW+ F SM  +H +
Sbjct: 393 AGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSACSYSGLSERGWEIFYSMSRDHKV 452

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
             R  HYACMV+LLGR G L EA E IRS P      +W T L ACR+H + ELGK AAE
Sbjct: 453 KPRAMHYACMVELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAE 512

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            +   +P+    +I+L NLY S+G  +  A + + +K + L     C+WIE   + + F 
Sbjct: 513 NLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGLRMLPACTWIEVKKQSYAFL 572

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
            G+ SH +T EIY +++ + ++I   GY+ +   +L +++EE++ + L  HSEK+A+AFG
Sbjct: 573 CGDKSHSQTKEIYEKVNNMMVEISRHGYVEENKALLPDVDEEEQ-RILKYHSEKLAIAFG 631

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LI+T    P+++ +  RVCGDCH+AIK+I+MVTGREIV+RD++RFHH +DG CSC DYW
Sbjct: 632 LINTPHWTPLQITQGHRVCGDCHSAIKFIAMVTGREIVVRDASRFHHFRDGSCSCGDYW 690



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 184/345 (53%), Gaps = 9/345 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N  R    +F +  +   G      TY  L+ +C+  R+    K V + +  S  EP+  
Sbjct: 94  NRYREAMELFEILELEHDGFDVGGSTYDALVSACVGLRSIRGVKRVFNYMVNSGFEPDLY 153

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++N ++ ++ KCG + +A K+F  M  K D+ SW +MI  +V+ G   +A  +F+ M E 
Sbjct: 154 VMNRVLFVHVKCGLMLDARKLFDEMPEK-DMASWMTMIGGFVDSGNFSEAFGLFLCMWEE 212

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
                   F+ +IRA +    V +G  I+   LK G  D D  V CALIDM+ K GS+  
Sbjct: 213 FNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGD-DTFVSCALIDMYSKCGSI-- 269

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+ VFD+M EK TVGW  +I      G   +A+  + +M  SG   D FT+S V+  C
Sbjct: 270 EDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSFYYEMRDSGAKIDHFTISIVIRIC 329

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + L      KQ H+  +R G   D+    +LVD Y+K    G ++D+  VF+RM   NV+
Sbjct: 330 ARLASLEYAKQAHAALVRRGYDTDIVANTALVDFYSKW---GRMEDAWHVFNRMRRKNVI 386

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           SW A+I GY  + G+ +EAV++F  M++  + PNH TF +VL AC
Sbjct: 387 SWNALIAGY-GNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSAC 430



 Score =  114 bits (284), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 97/405 (23%), Positives = 178/405 (43%), Gaps = 49/405 (12%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           ++ G   +A      M ++ N     T++ ++++        +G+ +HS   +  +  ++
Sbjct: 194 VDSGNFSEAFGLFLCMWEEFNDGRSRTFTTMIRASAGLGLVQVGRQIHSCALKRGVGDDT 253

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  +LI +YSKCG + +A+ +F  M  K   V W+S+I+SY   G   +A+  + EM +
Sbjct: 254 FVSCALIDMYSKCGSIEDAHCVFDQMPEK-TTVGWNSIIASYALHGYSEEALSFYYEMRD 312

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G   + +  S VIR C+   ++      +  L++ GY D+D+    AL+D + K    +
Sbjct: 313 SGAKIDHFTISIVIRICARLASLEYAKQAHAALVRRGY-DTDIVANTALVDFYSKWG-RM 370

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+ VF++M  KN + W  +I      G   +A+ +F  M+  G +P+  T   V+SAC
Sbjct: 371 EDAWHVFNRMRRKNVISWNALIAGYGNHGQGEEAVEMFEQMLREGMIPNHVTFLAVLSAC 430

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S      SG     W I   ++ D                        KV  R + +  M
Sbjct: 431 S-----YSGLSERGWEIFYSMSRD-----------------------HKVKPRAMHYACM 462

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL-LDSNVAEQ 409
                    V+  GR+    + +  +      P    +A++L AC    NL L    AE 
Sbjct: 463 ---------VELLGREGLLDEAYELIRSAPFKPTTNMWATLLTACRMHENLELGKLAAEN 513

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           +Y    ++      C    L+++Y  SG++++A    ++L  K L
Sbjct: 514 LYGMEPEK-----LCNYIVLLNLYNSSGKLKEAAGVLQTLKRKGL 553


>gi|297806459|ref|XP_002871113.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297316950|gb|EFH47372.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 637

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 211/573 (36%), Positives = 355/573 (61%), Gaps = 4/573 (0%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++  C+        K  H   +R  L  DV +   L++ Y+KC   G V+ +R+VFD ML
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKC---GFVELARQVFDGML 125

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
           + +++SW  +I  Y ++   + EA+ +F +M       + FT +SVL ACG   D+   +
Sbjct: 126 ERSLVSWNTMIGLYTRNR-MESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECK 184

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +++  ++K    L+  VG +L+ +YA+ G + DA + FES+ +K+ V++++MV  Y ++ 
Sbjct: 185 KLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSVTWSSMVAGYVQSK 244

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           N E+A  L    +   +  + +T +S++   S++ A+ +G+Q+HA I KSGF SN  + +
Sbjct: 245 NYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVAS 304

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           + + MY++C ++  ++ +F E++++N+  W ++I+GFAKH      + +F KM  DG+ P
Sbjct: 305 SAVDMYAKCGSLRESYIIFSEVQEKNIELWNTIISGFAKHARPKEVMILFEKMQQDGMHP 364

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N +T+ ++LS C H GL+ EG + F+ M   +G+   + HY+CMVD+LGR+G L+EA E 
Sbjct: 365 NEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYEL 424

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+S+P      +W + L +CRV  + EL + AA+ + E +P++   H+LLSN+YA+   W
Sbjct: 425 IKSIPFEPTASIWGSLLASCRVCKNLELAEVAAKKLFELEPENAGNHVLLSNIYAANKQW 484

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           E +A  RK +++ ++ K  G SWI+  +KVH F VGE+SHP+  EI   LD L +++++F
Sbjct: 485 EEIAKSRKLLRDCDVKKVRGQSWIDIKDKVHIFRVGESSHPRIREICTMLDNLVIELRKF 544

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY P     LH++E  +K + L QHSEK+A+ FGL+   +   +R+ KNLR+C DCH  +
Sbjct: 545 GYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPEGSTVRIMKNLRICVDCHEFM 604

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K  SM T R I++RD+NRFHH  DG CSC ++W
Sbjct: 605 KAASMATRRFIIVRDANRFHHFSDGHCSCGEFW 637



 Score =  166 bits (421), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 117/402 (29%), Positives = 195/402 (48%), Gaps = 47/402 (11%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           +L+ C R+      K  H    R +L+ +  + N LI+ YSKCG +  A ++F  M  +R
Sbjct: 69  ILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQVFDGML-ER 127

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW++MI  Y     + +A+ +F EM   GF  +E+  S+V+ AC    +      ++
Sbjct: 128 SLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACGANCDALECKKLH 187

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
              +K    D ++ VG AL+D++ K  + +  A +VF+ M +K++V W+ M+    Q   
Sbjct: 188 CLSMKTS-LDLNLYVGTALLDLYAKCGM-INDAVQVFESMQDKSSVTWSSMVAGYVQSKN 245

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ L+          ++FTLS V+ ACS L     GKQ+H+   ++G   +V V  S
Sbjct: 246 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRKSGFGSNVFVASS 305

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
            VDMYAKC   GS+ +S  +F  + + N+  W  II+G+ +   R KE + LF  M Q  
Sbjct: 306 AVDMYAKC---GSLRESYIIFSEVQEKNIELWNTIISGFAKH-ARPKEVMILFEKMQQDG 361

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + PN  TF+S+L  CG+                                   +G +E+ R
Sbjct: 362 MHPNEVTFSSLLSVCGH-----------------------------------TGLVEEGR 386

Query: 444 KAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           + F+ +        N+V Y+ MVD   +     +A+EL+  I
Sbjct: 387 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 428



 Score = 77.0 bits (188), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 63/235 (26%), Positives = 112/235 (47%), Gaps = 7/235 (2%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
             A  F  +L   +  GA+ + +  H + ++   + +  + N LI+ YS+C  VE A QV
Sbjct: 61  VQASDFIEILQLCARNGAVMEAKACHGKTMRMELQGDVTLSNVLINAYSKCGFVELARQV 120

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  M +R+++SW +MI  + ++   + AL+IF++M  +G K +  T  +VLSAC  A   
Sbjct: 121 FDGMLERSLVSWNTMIGLYTRNRMESEALDIFWEMRNEGFKFSEFTISSVLSACG-ANCD 179

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
           +   K    +  +  +   +     ++DL  + G + +A++   SM   + V  W + + 
Sbjct: 180 ALECKKLHCLSMKTSLDLNLYVGTALLDLYAKCGMINDAVQVFESMQDKSSV-TWSSMVA 238

Query: 667 ACRVHGDTE----LGKHAAEMILEQDPQDPAAHIL-LSNLYASAGHWEYVANIRK 716
                 + E    L + A  M LEQ+    ++ I   SNL A     +  A IRK
Sbjct: 239 GYVQSKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIRK 293



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 39/163 (23%), Positives = 80/163 (49%), Gaps = 3/163 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK +H+++ +S    N  + +S + +Y+KCG L E+  IF  +  K +I  W+++IS + 
Sbjct: 284 GKQMHAVIRKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NIELWNTIISGFA 342

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              +  + + +F +M + G  PNE  FS+++  C +T  V  G   +  +        +V
Sbjct: 343 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 402

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
                ++D+  +  + L  AY++   +  + T   W  ++  C
Sbjct: 403 VHYSCMVDILGRAGL-LSEAYELIKSIPFEPTASIWGSLLASC 444



 Score = 41.6 bits (96), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 27/99 (27%), Positives = 49/99 (49%), Gaps = 1/99 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL-TRSKLEPNSVI 115
            R ++ +   + M Q G HP+  T+S LL  C  +     G+    L+ T   L PN V 
Sbjct: 345 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 404

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
            + ++ +  + G L+EA ++ KS+  +     W S+++S
Sbjct: 405 YSCMVDILGRAGLLSEAYELIKSIPFEPTASIWGSLLAS 443


>gi|302823459|ref|XP_002993382.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
 gi|300138813|gb|EFJ05567.1| hypothetical protein SELMODRAFT_137057 [Selaginella moellendorffii]
          Length = 655

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 224/632 (35%), Positives = 367/632 (58%), Gaps = 12/632 (1%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A   F ++ EKN   + +M+    +    + A++LF   I      ++ T   V+ +
Sbjct: 33  IDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKS 92

Query: 293 CSEL--ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           C+ L  +    GK++H  AI  G   D+ V  SL+ MYAKC   GS   +  VF++M   
Sbjct: 93  CAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKC---GSFKFAAGVFEKMEPK 149

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           N++S+T++I  Y  +  +  EA +L+  M+   + P+ + +A+ L  C  + +    E +
Sbjct: 150 NLISYTSMIQAYTHTA-KHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIRE---GEAI 205

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +       R    C  N+L+ MY R GR+  A+  F+ +  K+L SYN M+  +AK  + 
Sbjct: 206 HVKLGNHERRTPVC-SNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMIAVFAKYDDG 264

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN-A 529
            KA  L  E+E   +  + +TF S+L   S +GA+ +G++IH ++ K G +     YN A
Sbjct: 265 SKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV-KGGDQPTDVAYNTA 323

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L++MY++C +   A  VF +   +NV +WTS+++ +++ G +   LE + +M  +G+ P+
Sbjct: 324 LVNMYAKCGSTHEARAVFNDCGLKNVFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPD 383

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T+ A+ +ACSH+GL  EG  +FR+M ++H IV    HY CM+DLLGR G L EA E +
Sbjct: 384 DVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLREAEELV 443

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           R+MP S DV+ W   L AC+V+GD ++G  A + I E +P D   ++L+ N+YA AG W 
Sbjct: 444 RTMPYSPDVVTWTILLSACKVYGDLKIGARAYKRITELNPPDSGPYLLMGNMYAKAGKWA 503

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VA ++K +K+R L K  G S IEA  ++H+F  G+T+HP   EI A L ++  ++   G
Sbjct: 504 DVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEFVCGDTAHPLNQEIRARLQEVHEQLSHAG 563

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y PDT  VL ++ EE K + L  HSE++A+  GL+++     + + KNLR+C DCH+  K
Sbjct: 564 YEPDTKEVLVDVNEEVKPELLLFHSERMALGLGLLTSDAGATLHIVKNLRICPDCHSFFK 623

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            +S +  R++++RDS+RFH  + G CSC DYW
Sbjct: 624 LVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 655



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 191/391 (48%), Gaps = 21/391 (5%)

Query: 80  TYSLLLKSCIRSRNFHL--GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           TY  +LKSC      +L  GK +H          + V+ NSLI +Y+KCG    A  +F+
Sbjct: 85  TYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFE 144

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M   ++++S++SMI +Y +  K V+A  ++ +ML  G  P+ Y ++A +  C       
Sbjct: 145 KM-EPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIREGE 203

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
             H+  G   +     + VC   AL+ M+ +    + SA  VFD +  K+   +  MI  
Sbjct: 204 AIHVKLGNHER----RTPVCSN-ALVGMYGRFG-RIASAKWVFDGIRYKDLASYNNMIAV 257

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             +      AI L+++M      P+ +T + V+ ACS+L   T GK++H          D
Sbjct: 258 FAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQPTD 317

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V    +LV+MYAKC   GS  ++R VF+     NV +WT++++ Y Q  G+ +  ++ + 
Sbjct: 318 VAYNTALVNMYAKC---GSTHEARAVFNDCGLKNVFTWTSLMSAYSQP-GQSQYRLEAYQ 373

Query: 378 DMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMY 433
            M    V P+  TF ++  AC +  L D  +   +Y  A++    +     +   +I + 
Sbjct: 374 RMNCEGVIPDDVTFTAIFNACSHSGLPDEGL---LYFRAMREDHWIVPLQPHYTCMIDLL 430

Query: 434 ARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            R GR+ +A +   ++ +  ++V++  ++ A
Sbjct: 431 GRVGRLREAEELVRTMPYSPDVVTWTILLSA 461



 Score =  115 bits (289), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 146/317 (46%), Gaps = 38/317 (11%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +GN L+  Y R   ++DA  AF  + EKN  SY  M+ AY +N   +KA +L  +  +  
Sbjct: 19  LGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQENDLHKKALQLFKKSINEE 78

Query: 485 VGTSAYTFASLLSGASSIGA--IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           +  +  T+ ++L   + +G   +  G++IH   I  GF ++  + N+LI MY++C + + 
Sbjct: 79  LQQNQATYVTVLKSCAHLGEDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKF 138

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  VF++ME +N+IS+TSMI  +        A E++ KML++GI P+   Y A L+ C  
Sbjct: 139 AAGVFEKMEPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCP- 197

Query: 603 AGLISEG-------WKHFR----------SMYDEHGIV------------QRMEHYACMV 633
              I EG         H R           MY   G +            + +  Y  M+
Sbjct: 198 --TIREGEAIHVKLGNHERRTPVCSNALVGMYGRFGRIASAKWVFDGIRYKDLASYNNMI 255

Query: 634 DLLGRSGSLTEALEFIRSMP---LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQD-P 689
            +  +    ++A+     M    L  ++  + + L AC   G    GK   + +   D P
Sbjct: 256 AVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKVKGGDQP 315

Query: 690 QDPAAHILLSNLYASAG 706
            D A +  L N+YA  G
Sbjct: 316 TDVAYNTALVNMYAKCG 332



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 65/235 (27%), Positives = 110/235 (46%), Gaps = 9/235 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G  PD+  Y+  L  C   R    G+ +H  L   +     V  N+L+ +Y + G 
Sbjct: 177 MLSEGIMPDIYAYAAALAVCPTIRE---GEAIHVKLGNHERR-TPVCSNALVGMYGRFGR 232

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +  A  +F  +  K D+ S+++MI+ +        AI +++EM      PN + F++V+ 
Sbjct: 233 IASAKWVFDGIRYK-DLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTFTSVLD 291

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           ACS    +  G  I+   +K G   +DV    AL++M+ K GS     A  VF+    KN
Sbjct: 292 ACSKLGALTEGKEIHK-KVKGGDQPTDVAYNTALVNMYAKCGST--HEARAVFNDCGLKN 348

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
              WT +++  +Q G  +  +  +  M   G +PD  T + + +ACS   L   G
Sbjct: 349 VFTWTSLMSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEG 403



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 50/209 (23%), Positives = 99/209 (47%), Gaps = 5/209 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           +DG   KAI     M  +   P+L T++ +L +C +      GK +H  + +   +P  V
Sbjct: 262 DDG--SKAISLYIEMEGRNLEPNLWTFTSVLDACSKLGALTEGKEIHKKV-KGGDQPTDV 318

Query: 115 ILNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
             N+ L+++Y+KCG  +EA  +F   G K ++ +W+S++S+Y   G+    +  +  M  
Sbjct: 319 AYNTALVNMYAKCGSTHEARAVFNDCGLK-NVFTWTSLMSAYSQPGQSQYRLEAYQRMNC 377

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  P++  F+A+  ACS++     G + +  + +  +          +ID+  +     
Sbjct: 378 EGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLR 437

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           E+   V       + V WT++++ C   G
Sbjct: 438 EAEELVRTMPYSPDVVTWTILLSACKVYG 466



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 28/95 (29%), Positives = 52/95 (54%), Gaps = 2/95 (2%)

Query: 512 HARIIKSGFESNHCIY--NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           H RII +  E     +  N L+  Y RC +++ A   F E+ ++N  S+  M+  + ++ 
Sbjct: 3   HERIIDANLEQEKETFLGNCLVRAYGRCKSIDDAVAAFSEIAEKNEYSYAIMMGAYQEND 62

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
              +AL++F K + + ++ N  TY+ VL +C+H G
Sbjct: 63  LHKKALQLFKKSINEELQQNQATYVTVLKSCAHLG 97


>gi|449461943|ref|XP_004148701.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
 gi|449517215|ref|XP_004165641.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Cucumis sativus]
          Length = 706

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 228/621 (36%), Positives = 371/621 (59%), Gaps = 9/621 (1%)

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSG 302
            +K++VG    I +       RDA+ +F    L  GF     T   +++AC  L+     
Sbjct: 92  VKKSSVGICSQIEKLVLCKKYRDALEMFEIFELEDGFHVGYSTYDALINACIGLKSIRGV 151

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K+L ++ +  G   D  +   ++ M+ KC   G + D+ ++FD M   N +SW  II+GY
Sbjct: 152 KRLCNYMVDNGFEPDQYMRNRVLLMHVKC---GMMIDACRLFDEMPARNAVSWGTIISGY 208

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V SG    EA +LF  M +        TFA++++A   L       Q+++ A+K G   D
Sbjct: 209 VDSGNY-VEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQD 267

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  +LI MY++ G +EDA   F+ + +K +V +N+++  YA +  SE+A +L HE+ D
Sbjct: 268 IFVSCALIDMYSKCGSLEDAHCVFDEMPDKTIVGWNSIIAGYALHGYSEEALDLYHEMRD 327

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           +GV    +TF+ ++   S + ++ + +Q+HA ++++GF  +     AL+  YS+   V+ 
Sbjct: 328 SGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNGFGLDVVANTALVDFYSKWGKVDD 387

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  VF  M  RN+ISW ++I G+  HG    A+++F KML +G+ PN +T++AVLSACS 
Sbjct: 388 ARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLSACSI 447

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           +GL   GW+ F+SM  +H +  R  H+ACM++LLGR G L EA   IR  P      +W 
Sbjct: 448 SGLFERGWEIFQSMTRDHKVKPRAMHFACMIELLGREGLLDEAYALIRKAPFQPTANMWA 507

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             L ACRVHG+ ELGK AAE +   +P+  + +I+L N+Y S+G  +  A++ + +K + 
Sbjct: 508 ALLRACRVHGNLELGKFAAEKLYGMEPEKLSNYIVLLNIYNSSGKLKEAADVFQTLKRKG 567

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD-TNFVLHEL 781
           L     CSWIE +N+ H F  G+  H +  ++  ++D+L L I + GY+P+  NF+L ++
Sbjct: 568 LRMLPACSWIEVNNQPHAFLSGDKHHVQIEKVVGKVDELMLNISKLGYVPEEQNFMLPDV 627

Query: 782 EE-EQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +E E+K++    HSEK+A+A+GL++T +  P+++ ++ R+C DCH+ IK I+M+T REIV
Sbjct: 628 DENEEKIR--MYHSEKLAIAYGLLNTLEKTPLQIVQSHRICSDCHSVIKLIAMITKREIV 685

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD++RFHH +DG CSC DYW
Sbjct: 686 IRDASRFHHFRDGSCSCGDYW 706



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 119/329 (36%), Positives = 182/329 (55%), Gaps = 9/329 (2%)

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN 130
           + G H    TY  L+ +CI  ++    K + + +  +  EP+  + N ++ ++ KCG + 
Sbjct: 125 EDGFHVGYSTYDALINACIGLKSIRGVKRLCNYMVDNGFEPDQYMRNRVLLMHVKCGMMI 184

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
           +A ++F  M   R+ VSW ++IS YV+ G  V+A  +F+ M E  +      F+ +IRA 
Sbjct: 185 DACRLFDEMP-ARNAVSWGTIISGYVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRAS 243

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTV 249
           +  E +  G  ++   +K G    D+ V CALIDM+ K GS  LE A+ VFD+M +K  V
Sbjct: 244 AGLEIIFPGRQLHSCAIKAG-LGQDIFVSCALIDMYSKCGS--LEDAHCVFDEMPDKTIV 300

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
           GW  +I      G   +A+ L+ +M  SG   D FT S ++  CS L      KQ+H+  
Sbjct: 301 GWNSIIAGYALHGYSEEALDLYHEMRDSGVKMDHFTFSIIIRICSRLASVARAKQVHASL 360

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           +R G  LDV    +LVD Y+K    G VDD+R VFDRM   N++SW A+I GY  + G  
Sbjct: 361 VRNGFGLDVVANTALVDFYSKW---GKVDDARHVFDRMSCRNIISWNALIAGY-GNHGHG 416

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           +EA+ +F  M++  + PNH TF +VL AC
Sbjct: 417 EEAIDMFEKMLREGMMPNHVTFLAVLSAC 445



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 107/407 (26%), Positives = 189/407 (46%), Gaps = 51/407 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G   +A     LM ++       T++ ++++         G+ +HS   ++ L  +
Sbjct: 208 YVDSGNYVEAFRLFILMREEFYDCGPRTFATMIRASAGLEIIFPGRQLHSCAIKAGLGQD 267

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  +LI +YSKCG L +A+ +F  M +K  IV W+S+I+ Y   G   +A+ ++ EM 
Sbjct: 268 IFVSCALIDMYSKCGSLEDAHCVFDEMPDK-TIVGWNSIIAGYALHGYSEEALDLYHEMR 326

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
           + G   + + FS +IR CS   +VA    ++  L++ G F  DV    AL+D + K G V
Sbjct: 327 DSGVKMDHFTFSIIIRICSRLASVARAKQVHASLVRNG-FGLDVVANTALVDFYSKWGKV 385

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           D   A  VFD+M+ +N + W  +I      G   +AI +F  M+  G +P+  T   V+S
Sbjct: 386 D--DARHVFDRMSCRNIISWNALIAGYGNHGHGEEAIDMFEKMLREGMMPNHVTFLAVLS 443

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS   LF  G     W I   +  D                        KV  R +   
Sbjct: 444 ACSISGLFERG-----WEIFQSMTRD-----------------------HKVKPRAMHFA 475

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL-LDSNVA 407
            M         ++  GR+    + ++ + +    P    +A++L+AC   GNL L    A
Sbjct: 476 CM---------IELLGREGLLDEAYALIRKAPFQPTANMWAALLRACRVHGNLELGKFAA 526

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           E++Y    ++   L + +   L+++Y  SG++++A   F++L  K L
Sbjct: 527 EKLYGMEPEK---LSNYI--VLLNIYNSSGKLKEAADVFQTLKRKGL 568


>gi|218186186|gb|EEC68613.1| hypothetical protein OsI_36980 [Oryza sativa Indica Group]
          Length = 981

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 244/753 (32%), Positives = 423/753 (56%), Gaps = 12/753 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G +++ +     M ++G   + + ++ ++  C    N   G  V S +  S L+    
Sbjct: 122 SNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVS 181

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSLI+++   G + +A K+F  M  + D +S ++MIS Y ++G       +F +M   
Sbjct: 182 VANSLITMFGNLGRVQDAEKLFDRM-EEHDTISRNAMISMYSHQGICSKCFLVFSDMRHH 240

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  P+     +++  C++ ++ + G  I+   L+    DS V V  AL++M+   +  L 
Sbjct: 241 GLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSS-LDSSVTVINALVNMY-SAAGKLS 298

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  +F  M+ ++ + W  MI+   Q     DA++    +  +  +P+  T S  + ACS
Sbjct: 299 DAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGACS 358

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
                  GK +H+  ++  L  ++ VG SL+ MY KC    S++D+ KVF  M  H+V+S
Sbjct: 359 SPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCN---SMEDAEKVFQSMPTHDVVS 415

Query: 355 WTAIITGY--VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD-SNVAEQVY 411
           +  +I GY  ++ G +   A+++FS +    + PN+ T  ++  +  +  D  N    ++
Sbjct: 416 YNVLIGGYAVLEDGTK---AMQVFSWIRSAGIKPNYITMINIHGSFTSSNDLHNYGRPLH 472

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
            + ++ G   D+ V NSLI+MYA+ G +E +   F S+  KN+VS+N ++ A A+  + E
Sbjct: 473 AYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAANAQLGHGE 532

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A +L  +++  G        A  LS  +S+ ++ +G Q+H   +KSG +S+  + NA +
Sbjct: 533 EALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQLHGLGMKSGLDSDSYVVNAAM 592

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C  +    Q+  +   R    W ++I+G+AK+G+   A E F +M+A G KP+ +
Sbjct: 593 DMYGKCGKMNEMLQMVPDQAIRPQQCWNTLISGYAKYGYFKEAEETFKQMVAMGRKPDYV 652

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++A+LSACSHAGL+ +G  ++ SM    G+   ++H  C+VDLLGR G   EA  FI  
Sbjct: 653 TFVALLSACSHAGLVDKGIDYYNSMASSFGVSPGIKHCVCIVDLLGRLGRFAEAERFIEE 712

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           MP+  + L+WR+ L + R H + E+G+ AA+ +LE DP D +A++LLSNLYA+   W  V
Sbjct: 713 MPVLPNDLIWRSLLSSSRTHKNLEIGRKAAKKLLELDPFDDSAYVLLSNLYATNARWVDV 772

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
             +R  MK  N+ K   CSW++  N+V  F +G+  H    +IYA+LD++ LK++E GY+
Sbjct: 773 DKLRSHMKTININKRPACSWLKLKNEVSTFGIGDRGHKHAEKIYAKLDEMLLKLREVGYI 832

Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
            DT+  LH+ +EEQK Q L+ HSEK+A+A+GLI
Sbjct: 833 ADTSSALHDTDEEQKEQNLWNHSEKLALAYGLI 865



 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 164/588 (27%), Positives = 292/588 (49%), Gaps = 18/588 (3%)

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
           R      G  +H+L  R+ L  N  I  +L+ LY   G +++A ++F  M  +R++VSW+
Sbjct: 56  RDEGIACGAAIHALTHRAGLMGNVYIGTALLHLYGSRGIVSDARRLFWEM-PERNVVSWT 114

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           +++ +  + G   + +  + +M   G   N   F+ V+  C + EN   G  +   ++  
Sbjct: 115 ALMVALSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVS 174

Query: 210 GYFDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
           G   + V V  +LI MF  G++  ++ A K+FD+M E +T+    MI+  +  G      
Sbjct: 175 G-LQNQVSVANSLITMF--GNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCF 231

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMY 328
            +F DM   G  PD  TL  ++S C+  + F+ G  +HS  +R+ L   V V  +LV+MY
Sbjct: 232 LVFSDMRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMY 291

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNH 388
           +     G + D+  +F  M   +++SW  +I+ YVQ+     +A+K    +      PNH
Sbjct: 292 SAA---GKLSDAEFLFWNMSRRDLISWNTMISSYVQN-CNSTDALKTLGQLFHTNEIPNH 347

Query: 389 FTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            TF+S L AC   G L+D  +   +      +   L   VGNSLI+MY +   MEDA K 
Sbjct: 348 LTFSSALGACSSPGALIDGKMVHAIVLQLSLQRNLL---VGNSLITMYGKCNSMEDAEKV 404

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F+S+   ++VSYN ++  YA   +  KA ++   I   G+  +  T  ++    +S   +
Sbjct: 405 FQSMPTHDVVSYNVLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINIHGSFTSSNDL 464

Query: 506 -GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
              G  +HA II++GF S+  + N+LI+MY++C N+E++  +F  + ++N++SW ++I  
Sbjct: 465 HNYGRPLHAYIIRTGFLSDEYVANSLITMYAKCGNLESSTNIFNSITNKNIVSWNAIIAA 524

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
            A+ G    AL++F  M   G K + +     LS+C+    + EG +    +  + G+  
Sbjct: 525 NAQLGHGEEALKLFIDMQHAGNKLDRVCLAECLSSCASLASLEEGMQ-LHGLGMKSGLDS 583

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
                   +D+ G+ G + E L+ +    +      W T +     +G
Sbjct: 584 DSYVVNAAMDMYGKCGKMNEMLQMVPDQAIRPQQ-CWNTLISGYAKYG 630



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 236/457 (51%), Gaps = 9/457 (1%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC---SNTENVAIG 199
           R   +W + +S  V  G+ V A  +   M E G   + +  ++++ AC      E +A G
Sbjct: 4   RTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGIACG 63

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+    + G    +V +G AL+ ++    + +  A ++F +M E+N V WT ++   +
Sbjct: 64  AAIHALTHRAGLM-GNVYIGTALLHLYGSRGI-VSDARRLFWEMPERNVVSWTALMVALS 121

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
             G   + +R +  M   G   +    + VVS C  LE    G Q+ S  I +GL   V 
Sbjct: 122 SNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGLQNQVS 181

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           V  SL+ M+      G V D+ K+FDRM +H+ +S  A+I+ Y   G   K    +FSDM
Sbjct: 182 VANSLITMFGNL---GRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSK-CFLVFSDM 237

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
               + P+  T  S++  C +    +    +++  ++        V N+L++MY+ +G++
Sbjct: 238 RHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGKL 297

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
            DA   F ++  ++L+S+NTM+ +Y +N NS  A + L ++  T    +  TF+S L   
Sbjct: 298 SDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGAC 357

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           SS GA+  G+ +HA +++   + N  + N+LI+MY +C ++E A +VF+ M   +V+S+ 
Sbjct: 358 SSPGALIDGKMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMPTHDVVSYN 417

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
            +I G+A      +A+++F  + + GIKPN IT I +
Sbjct: 418 VLIGGYAVLEDGTKAMQVFSWIRSAGIKPNYITMINI 454



 Score =  179 bits (454), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 120/434 (27%), Positives = 214/434 (49%), Gaps = 9/434 (2%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL---ELF 299
           M ++    W   ++ C + G    A  L   M   G     F L+ +V+AC      E  
Sbjct: 1   MPDRTPSTWYTAVSGCVRCGRDVAAFELLRGMRERGVPLSGFALASLVTACERRGRDEGI 60

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G  +H+   R GL  +V +G +L+ +Y      G V D+R++F  M + NV+SWTA++
Sbjct: 61  ACGAAIHALTHRAGLMGNVYIGTALLHLYGS---RGIVSDARRLFWEMPERNVVSWTALM 117

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
              + S G  +E ++ +  M +  V  N   FA+V+  CG+L +     QV +H +  G 
Sbjct: 118 VA-LSSNGYLEETLRAYRQMRREGVPCNANAFATVVSLCGSLENEVPGLQVASHVIVSGL 176

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
                V NSLI+M+   GR++DA K F+ + E + +S N M+  Y+      K F +  +
Sbjct: 177 QNQVSVANSLITMFGNLGRVQDAEKLFDRMEEHDTISRNAMISMYSHQGICSKCFLVFSD 236

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +   G+   A T  SL+S  +S      G  IH+  ++S  +S+  + NAL++MYS    
Sbjct: 237 MRHHGLRPDATTLCSLMSVCASADHFSHGSGIHSLCLRSSLDSSVTVINALVNMYSAAGK 296

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +  A  +F  M  R++ISW +MI+ + ++  +  AL+   ++      PN +T+ + L A
Sbjct: 297 LSDAEFLFWNMSRRDLISWNTMISSYVQNCNSTDALKTLGQLFHTNEIPNHLTFSSALGA 356

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CS  G + +G K   ++  +  + + +     ++ + G+  S+ +A +  +SMP + DV+
Sbjct: 357 CSSPGALIDG-KMVHAIVLQLSLQRNLLVGNSLITMYGKCNSMEDAEKVFQSMP-THDVV 414

Query: 660 VWRTFLGACRVHGD 673
            +   +G   V  D
Sbjct: 415 SYNVLIGGYAVLED 428


>gi|449517557|ref|XP_004165812.1| PREDICTED: pentatricopeptide repeat-containing protein At4g16835,
           mitochondrial-like [Cucumis sativus]
          Length = 667

 Score =  436 bits (1121), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 234/649 (36%), Positives = 376/649 (57%), Gaps = 53/649 (8%)

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL-GCPRDAIRLFL 272
           SDV      I  FV+ + DLESA  VF+KM+ + TV W  M++  T++ G  ++A  LF 
Sbjct: 71  SDVVSLNKTIASFVR-ACDLESARNVFEKMSVRTTVTWNTMLSGYTKVAGKVKEAHELF- 128

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           D I     PD  + + ++  C           L S+ +   LA                 
Sbjct: 129 DKIPE---PDSVSYN-IMLVC----------YLRSYGVEAALAF---------------- 158

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
                      F++M   ++ SW  +I+G+ Q+G   K A  LFS M +     N  +++
Sbjct: 159 -----------FNKMPVKDIASWNTLISGFAQNGQMQK-AFDLFSVMPE----KNGVSWS 202

Query: 393 SVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK 452
           +++       D   AE++Y +   +   ++     ++++ Y + G++E A + F+ +  K
Sbjct: 203 AMISGYVEHGDLEAAEELYKNVGMKSVVVE----TAMLTGYMKFGKVELAERIFQRMAVK 258

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           NLV++N+M+  Y +N  +E   ++   + ++ V  +  + +S+L G S++ A+  G Q+H
Sbjct: 259 NLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMH 318

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
             + KS    +     +LISMY +C ++++A+++F EM  ++VISW +MI+G+A+HG   
Sbjct: 319 QLVSKSPLSKDTTACTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGR 378

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
           +AL +F KM    +KP+ IT++AV+ AC+HAG +  G ++F+SM  E GI  +  HY C+
Sbjct: 379 KALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCV 438

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           +DLLGR+G L EA+  I+ MP      ++ T LGACR+H + +L + AA  +L  DP   
Sbjct: 439 IDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGACRIHKNLDLAEFAARNLLNLDPTSA 498

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
             ++ L+N+YA+   W+ VA +RK MKE N++K  G SWIE  +  H+F   +  HP+  
Sbjct: 499 TGYVQLANIYAATNKWDQVAKVRKMMKEHNVVKIPGYSWIEIKSVTHEFRSSDRLHPELT 558

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
            I+ +L++L  K+K  GY+PD  F LH++EEE K + L  HSEK+A+AFGL+ T+   PI
Sbjct: 559 SIHKKLNELDGKMKLAGYVPDLEFALHDVEEEHKEKLLLWHSEKLAIAFGLMKTAPGTPI 618

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RVFKNLRVCGDCH AIK+IS +  REI++RD+ RFHH ++G CSC DYW
Sbjct: 619 RVFKNLRVCGDCHRAIKFISAIEKREIIVRDTTRFHHFRNGFCSCGDYW 667



 Score =  135 bits (341), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 103/357 (28%), Positives = 170/357 (47%), Gaps = 19/357 (5%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           EP+SV  N ++  Y +   +  A   F  M  K DI SW+++IS +   G+   A  +F 
Sbjct: 133 EPDSVSYNIMLVCYLRSYGVEAALAFFNKMPVK-DIASWNTLISGFAQNGQMQKAFDLFS 191

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            M E     N   +SA+I       ++     +Y      G     V V  A++  ++K 
Sbjct: 192 VMPE----KNGVSWSAMISGYVEHGDLEAAEELYK---NVGM--KSVVVETAMLTGYMKF 242

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G V+L  A ++F +M  KN V W  MI    +     D +++F  MI S   P+  +LS 
Sbjct: 243 GKVEL--AERIFQRMAVKNLVTWNSMIAGYVENCRAEDGLKVFKTMIESRVRPNPLSLSS 300

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+  CS L     G+Q+H    ++ L+ D     SL+ MY KC   G +D + K+F  M 
Sbjct: 301 VLLGCSNLSALPLGRQMHQLVSKSPLSKDTTACTSLISMYCKC---GDLDSAWKLFLEMP 357

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             +V+SW A+I+GY Q G   ++A+ LF  M  G + P+  TF +V+ AC +    ++  
Sbjct: 358 RKDVISWNAMISGYAQHGA-GRKALHLFDKMRNGTMKPDWITFVAVILACNHAGFVDLGV 416

Query: 409 QVYTHAVKR-GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           Q +    K  G          +I +  R+GR+++A    + + F+ +   Y T++ A
Sbjct: 417 QYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAVSLIKEMPFKPHAAIYGTLLGA 473



 Score =  133 bits (334), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 120/486 (24%), Positives = 214/486 (44%), Gaps = 84/486 (17%)

Query: 92  RNFHLG---------------KLVHSLLTRSKLEPN--------SVILNSLISLYSKCGD 128
           RN HLG               + +H L++ + + PN         V LN  I+ + +  D
Sbjct: 30  RNLHLGSNEESSSIASSIHPPRRIH-LVSPNNVTPNLHVDTASDVVSLNKTIASFVRACD 88

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVN-RGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
           L  A  +F+ M + R  V+W++M+S Y    GK  +A  +F ++ E    P+        
Sbjct: 89  LESARNVFEKM-SVRTTVTWNTMLSGYTKVAGKVKEAHELFDKIPE----PDS------- 136

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
                        + Y  +L C Y                  S  +E+A   F+KM  K+
Sbjct: 137 -------------VSYNIMLVC-YLR----------------SYGVEAALAFFNKMPVKD 166

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR--FTLSGVVSACSELELFTSGKQL 305
              W  +I+   Q G  + A  LF        +P++   + S ++S   E     + ++L
Sbjct: 167 IASWNTLISGFAQNGQMQKAFDLF------SVMPEKNGVSWSAMISGYVEHGDLEAAEEL 220

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           +      G+   V V  +++  Y K    G V+ + ++F RM   N+++W ++I GYV++
Sbjct: 221 YK---NVGMK-SVVVETAMLTGYMKF---GKVELAERIFQRMAVKNLVTWNSMIAGYVEN 273

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
             R ++ +K+F  MI+ +V PN  + +SVL  C NL    +  Q++    K   + D   
Sbjct: 274 -CRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKDTTA 332

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
             SLISMY + G ++ A K F  +  K+++S+N M+  YA++    KA  L  ++ +  +
Sbjct: 333 CTSLISMYCKCGDLDSAWKLFLEMPRKDVISWNAMISGYAQHGAGRKALHLFDKMRNGTM 392

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAF 544
                TF +++   +  G +  G Q    + K  G E+    Y  +I +  R   ++ A 
Sbjct: 393 KPDWITFVAVILACNHAGFVDLGVQYFKSMKKEFGIEAKPVHYTCVIDLLGRAGRLDEAV 452

Query: 545 QVFKEM 550
            + KEM
Sbjct: 453 SLIKEM 458



 Score = 86.3 bits (212), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 127/310 (40%), Gaps = 44/310 (14%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ + R +  +     M +    P+  + S +L  C       LG+ +H L+++S L  +
Sbjct: 270 YVENCRAEDGLKVFKTMIESRVRPNPLSLSSVLLGCSNLSALPLGRQMHQLVSKSPLSKD 329

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +    SLIS+Y KCGDL+ A K+F  M  ++D++SW++MIS Y   G    A+H+F +M 
Sbjct: 330 TTACTSLISMYCKCGDLDSAWKLFLEMP-RKDVISWNAMISGYAQHGAGRKALHLFDKMR 388

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
                P+   F AVI AC++   V +G           YF S                  
Sbjct: 389 NGTMKPDWITFVAVILACNHAGFVDLG---------VQYFKS------------------ 421

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++  + +     E   V +T +I    + G   +A+ L  +M    F P       ++ A
Sbjct: 422 MKKEFGI-----EAKPVHYTCVIDLLGRAGRLDEAVSLIKEM---PFKPHAAIYGTLLGA 473

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C           L  +A R  L LD       V +          D   KV   M +HNV
Sbjct: 474 CR----IHKNLDLAEFAARNLLNLDPTSATGYVQLANIYAATNKWDQVAKVRKMMKEHNV 529

Query: 353 MSWTAIITGY 362
           +     I GY
Sbjct: 530 VK----IPGY 535


>gi|359488803|ref|XP_002272525.2| PREDICTED: putative pentatricopeptide repeat-containing protein
            At5g09950 [Vitis vinifera]
          Length = 1291

 Score =  436 bits (1120), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 214/579 (36%), Positives = 347/579 (59%), Gaps = 4/579 (0%)

Query: 283  RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
            ++   G       +  F+  K+ H+     GL  D  +      MY        +D +  
Sbjct: 717  KYKTIGSAPGTDTISCFSCLKKTHAKIFAYGLQYDSRILTKFAIMYVSFN---RIDAASI 773

Query: 343  VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
            VF+ + +     W  +I G+  + GR   +++L+S M++  + P+ F F   LK+C  L 
Sbjct: 774  VFEDIPNPCSFLWNVMIRGFA-TDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLS 832

Query: 403  DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
            D    + ++ H V  G + D  V  +L+ MYA+ G +E AR  F+ +  ++LVS+ +M+ 
Sbjct: 833  DLQRGKVIHQHLVCCGCSNDLFVDAALVDMYAKCGDIEAARLVFDKMAVRDLVSWTSMIS 892

Query: 463  AYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
             YA N  + +       +  +GV  +  +  S+L    ++GA+ KGE  H+ +I++GFE 
Sbjct: 893  GYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEF 952

Query: 523  NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
            +  +  A++ MYS+C +++ A  +F E   ++++ W++MI  +  HG   +A+++F +M+
Sbjct: 953  DILVATAIMDMYSKCGSLDLARCLFDETAGKDLVCWSAMIASYGIHGHGRKAIDLFDQMV 1012

Query: 583  ADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSL 642
              G++P+ +T+  VLSACSH+GL+ EG  +F+ M +E  I +++ +YACMVDLLGR+G L
Sbjct: 1013 KAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYACMVDLLGRAGQL 1072

Query: 643  TEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLY 702
            +EA++ I +MP+  D  +W + LGACR+H + +L +  A+ +   DP     H+LLSN+Y
Sbjct: 1073 SEAVDLIENMPVEPDASIWGSLLGACRIHNNLDLAEKIADHLFHLDPVHAGYHVLLSNIY 1132

Query: 703  ASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLA 762
            A+   W  V  +RK M  R   K  G S +E DN+VHKF VG+ SHP+  ++YA+L++LA
Sbjct: 1133 AAKSRWNEVEKVRKMMARRGANKIQGFSLVEYDNQVHKFGVGDRSHPQWEKLYAKLEELA 1192

Query: 763  LKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCG 822
              +K  GY+P T+FVLH++EEE K   L  HSE++A+AFGLI+TS    +R+ KNLR+CG
Sbjct: 1193 APMKHLGYVPLTDFVLHDIEEEAKEAALSYHSERLAIAFGLINTSPGTTLRITKNLRICG 1252

Query: 823  DCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            DCH AIK IS +  R I++RD +RFH  +DG CSC DYW
Sbjct: 1253 DCHNAIKLISKIVNRVILVRDMHRFHRFEDGVCSCGDYW 1291



 Score =  397 bits (1019), Expect = e-107,   Method: Compositional matrix adjust.
 Identities = 230/700 (32%), Positives = 386/700 (55%), Gaps = 12/700 (1%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           L ++C   R+      +HS + ++ +  ++     L SLY+KC  L  A K+F    +  
Sbjct: 10  LFQACNNGRSV---SQLHSQVFKTGILHDTFFATKLNSLYAKCASLQAARKVFDETPHP- 65

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           ++  W+S + SY    +  + + +F  M+   G  P+ +     ++AC+    + +G +I
Sbjct: 66  NVHLWNSTLRSYCREKQWEETLRLFHLMICTAGEAPDNFTIPIALKACAGLRMLELGKVI 125

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           +GF  K     SD+ VG AL++++ K    +  A KVF++    +TV WT M+T   Q  
Sbjct: 126 HGFAKKNDEIGSDMFVGSALVELYSKCG-QMGEALKVFEEFQRPDTVLWTSMVTGYQQNN 184

Query: 263 CPRDAIRLFLDMILSG-FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
            P +A+ LF  M++    + D  TL  VVSAC++L    +G  +H   IR     D+ + 
Sbjct: 185 DPEEALALFSQMVMMDCVVLDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLV 244

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SL+++YAK    G    +  +F +M + +V+SW+ +I  Y  +   + EA+ LF +MI+
Sbjct: 245 NSLLNLYAKT---GCEKIAANLFSKMPEKDVISWSTMIACYANNEAAN-EALNLFHEMIE 300

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
            +  PN  T  S L+AC    +    ++++  AV +G  LD  V  +LI MY +    ++
Sbjct: 301 KRFEPNSVTVVSALQACAVSRNLEEGKKIHKIAVWKGFELDFSVSTALIDMYMKCSCPDE 360

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           A   F+ L +K++VS+  ++  YA+N  + K+  +   +   G+   A     +L+ +S 
Sbjct: 361 AVDLFQRLPKKDVVSWVALLSGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSE 420

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +G   +   +H  +++SGF SN  +  +LI +YS+C ++  A ++FK M  R+V+ W+SM
Sbjct: 421 LGIFQQALCLHGYVVRSGFNSNVFVGASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSM 480

Query: 562 ITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           I  +  HG    ALEIF +M+ +  ++PN +T++++LSACSHAGL+ EG K F  M  ++
Sbjct: 481 IAAYGIHGRGGEALEIFDQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDY 540

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            +    EH+  MVDLLGR G L +A++ I  MP+ A   VW   LGACR+H + E+G+ A
Sbjct: 541 QLRPDSEHFGIMVDLLGRIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAA 600

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +   DP     +ILLSN+YA  G W+ VA +R R+KER L K  G S +E    VH 
Sbjct: 601 AKNLFWLDPSHAGYYILLSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHS 660

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
           F   +  HP + +IY  L +L  ++ +  Y+PD +F+LH+
Sbjct: 661 FLASDRFHPDSQKIYELLRKLEAQMGKEVYIPDLDFLLHD 700



 Score =  206 bits (524), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 131/489 (26%), Positives = 253/489 (51%), Gaps = 15/489 (3%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVILNSLISLYSKC 126
           ++   G  PD  T  + LK+C   R   LGK++H    ++ ++  +  + ++L+ LYSKC
Sbjct: 93  MICTAGEAPDNFTIPIALKACAGLRMLELGKVIHGFAKKNDEIGSDMFVGSALVELYSKC 152

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSA 185
           G + EA K+F+    + D V W+SM++ Y       +A+ +F +M+ +     +     +
Sbjct: 153 GQMGEALKVFEEF-QRPDTVLWTSMVTGYQQNNDPEEALALFSQMVMMDCVVLDPVTLVS 211

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+ AC+   NV  G  ++G +++   FD D+ +  +L++++ K   + + A  +F KM E
Sbjct: 212 VVSACAQLLNVKAGSCVHGLVIR-REFDGDLPLVNSLLNLYAKTGCE-KIAANLFSKMPE 269

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           K+ + W+ MI          +A+ LF +MI   F P+  T+   + AC+       GK++
Sbjct: 270 KDVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRNLEEGKKI 329

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H  A+  G  LD  V  +L+DMY KC+     D++  +F R+   +V+SW A+++GY Q+
Sbjct: 330 HKIAVWKGFELDFSVSTALIDMYMKCSCP---DEAVDLFQRLPKKDVVSWVALLSGYAQN 386

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           G   K ++ +F +M+   + P+      +L A   L     A  ++ + V+ G   +  V
Sbjct: 387 GMAYK-SMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFNSNVFV 445

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTG 484
           G SLI +Y++ G + DA K F+ +  +++V +++M+ AY  +    +A E+  + ++++ 
Sbjct: 446 GASLIELYSKCGSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIFDQMVKNST 505

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARII---KSGFESNHCIYNALISMYSRCANVE 541
           V  +  TF S+LS  S  G + +G +I  R++   +   +S H  +  ++ +  R   + 
Sbjct: 506 VRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEH--FGIMVDLLGRIGQLG 563

Query: 542 AAFQVFKEM 550
            A  +   M
Sbjct: 564 KAMDIINRM 572



 Score =  186 bits (472), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 166/700 (23%), Positives = 302/700 (43%), Gaps = 124/700 (17%)

Query: 78  LDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           LD  +L+  + +C +  N   G  VH L+ R + + +  ++NSL++LY+K G    A  +
Sbjct: 204 LDPVTLVSVVSACAQLLNVKAGSCVHGLVIRREFDGDLPLVNSLLNLYAKTGCEKIAANL 263

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K D++SWS+MI+ Y N     +A+++F EM+E  F PN     + ++AC+ + N
Sbjct: 264 FSKMPEK-DVISWSTMIACYANNEAANEALNLFHEMIEKRFEPNSVTVVSALQACAVSRN 322

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+   +  G F+ D  V  ALIDM++K S   + A  +F ++ +K+ V W  ++
Sbjct: 323 LEEGKKIHKIAVWKG-FELDFSVSTALIDMYMKCSCP-DEAVDLFQRLPKKDVVSWVALL 380

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +   Q G    ++ +F +M+  G  PD   +  +++A SEL +F     LH + +R+G  
Sbjct: 381 SGYAQNGMAYKSMGVFRNMLSDGIQPDAVAVVKILAASSELGIFQQALCLHGYVVRSGFN 440

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG--------- 366
            +V VG SL+++Y+KC   GS+ D+ K+F  M+  +V+ W+++I  Y   G         
Sbjct: 441 SNVFVGASLIELYSKC---GSLGDAVKLFKGMIVRDVVIWSSMIAAYGIHGRGGEALEIF 497

Query: 367 --------------------------GRDKEAVKLFSDMIQG-QVAPNHFTFASVLKACG 399
                                     G  +E +K+F  M+   Q+ P+   F  ++   G
Sbjct: 498 DQMVKNSTVRPNNVTFLSILSACSHAGLVEEGLKIFDRMVHDYQLRPDSEHFGIMVDLLG 557

Query: 400 NLLDSNVAEQVYT---------------------HAVKRGRA-------LDDCVGNSLI- 430
            +     A  +                       H ++ G A       LD       I 
Sbjct: 558 RIGQLGKAMDIINRMPIPAGPHVWGALLGACRIHHNIEMGEAAAKNLFWLDPSHAGYYIL 617

Query: 431 --SMYARSGRMEDA--------RKAFESLFEKNLVSYNTMVDAYAKN----LNSEKAFEL 476
             ++YA  G+ ++          +  + +F +++V     V ++  +     +S+K +EL
Sbjct: 618 LSNIYAVDGKWDNVAELRTRIKERGLKKMFGQSMVEVRGGVHSFLASDRFHPDSQKIYEL 677

Query: 477 LHEIE-----------------DTGV----------GTSAYTFASLLSGASSIGAIGKGE 509
           L ++E                 DTG             S Y       G  +I      +
Sbjct: 678 LRKLEAQMGKEVYIPDLDFLLHDTGAVLQFWQRIKATESKYKTIGSAPGTDTISCFSCLK 737

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           + HA+I   G + +  I      MY     ++AA  VF+++ +     W  MI GFA  G
Sbjct: 738 KTHAKIFAYGLQYDSRILTKFAIMYVSFNRIDAASIVFEDIPNPCSFLWNVMIRGFATDG 797

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH----GIVQR 625
               +LE++ KM+  G+KP+   +   L +C+    +  G      +  +H    G    
Sbjct: 798 RFLSSLELYSKMMEKGLKPDKFAFPFALKSCAGLSDLQRG-----KVIHQHLVCCGCSND 852

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           +   A +VD+  + G +  A      M +  D++ W + +
Sbjct: 853 LFVDAALVDMYAKCGDIEAARLVFDKMAVR-DLVSWTSMI 891



 Score =  174 bits (440), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 109/380 (28%), Positives = 197/380 (51%), Gaps = 22/380 (5%)

Query: 73   GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
            G+ P  DT S    SC++          H+ +    L+ +S IL     +Y     ++ A
Sbjct: 722  GSAPGTDTISCF--SCLKK--------THAKIFAYGLQYDSRILTKFAIMYVSFNRIDAA 771

Query: 133  NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            + +F+ + N    + W+ MI  +   G+ + ++ ++ +M+E G  P+++ F   +++C+ 
Sbjct: 772  SIVFEDIPNPCSFL-WNVMIRGFATDGRFLSSLELYSKMMEKGLKPDKFAFPFALKSCAG 830

Query: 193  TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
              ++  G +I+  L+ CG   +D+ V  AL+DM+ K   D+E+A  VFDKM  ++ V WT
Sbjct: 831  LSDLQRGKVIHQHLVCCGC-SNDLFVDAALVDMYAKCG-DIEAARLVFDKMAVRDLVSWT 888

Query: 253  LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
             MI+     G   + +  F  M  SG +P+R ++  V+ AC  L     G+  HS+ I+T
Sbjct: 889  SMISGYAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQT 948

Query: 313  GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            G   D+ V  +++DMY+KC   GS+D +R +FD     +++ W+A+I  Y    G  ++A
Sbjct: 949  GFEFDILVATAIMDMYSKC---GSLDLARCLFDETAGKDLVCWSAMIASY-GIHGHGRKA 1004

Query: 373  VKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
            + LF  M++  V P+H TF  VL AC   G L +  +  Q+ T      R L +     +
Sbjct: 1005 IDLFDQMVKAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLMTEEFVIARKLSNYA--CM 1062

Query: 430  ISMYARSGRMEDARKAFESL 449
            + +  R+G++ +A    E++
Sbjct: 1063 VDLLGRAGQLSEAVDLIENM 1082



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 42/154 (27%), Positives = 80/154 (51%), Gaps = 1/154 (0%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            + ++G   + +   DLM   G  P+  +   +L +C        G+  HS + ++  E +
Sbjct: 894  YAHNGYNSETLGFFDLMRSSGVIPNRVSILSVLLACGNLGALRKGEWFHSYVIQTGFEFD 953

Query: 113  SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             ++  +++ +YSKCG L+ A  +F     K D+V WS+MI+SY   G    AI +F +M+
Sbjct: 954  ILVATAIMDMYSKCGSLDLARCLFDETAGK-DLVCWSAMIASYGIHGHGRKAIDLFDQMV 1012

Query: 173  ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
            + G  P+   F+ V+ ACS++  +  G + +  +
Sbjct: 1013 KAGVRPSHVTFTCVLSACSHSGLLEEGKMYFQLM 1046


>gi|224115126|ref|XP_002332220.1| predicted protein [Populus trichocarpa]
 gi|222831877|gb|EEE70354.1| predicted protein [Populus trichocarpa]
          Length = 673

 Score =  435 bits (1119), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 241/674 (35%), Positives = 383/674 (56%), Gaps = 21/674 (3%)

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           +++  ++K G  + +  V   L++++ K  V + +A KVFD +  +N V WT ++T   Q
Sbjct: 1   MVHAHVIKTGTHE-EFFVMSFLVNVYAKCGV-MVNARKVFDNLPRRNVVVWTTLMTGYVQ 58

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
              P  A+ +F DM+ SG  P  FTLS  ++ACS LE  T GKQ H++ I+  ++ D  +
Sbjct: 59  NSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHDSSI 118

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           G +L  +Y+K    GS+D S K F    + +V+SWT II+      GR    ++LF +M+
Sbjct: 119 GNALCSLYSKF---GSLDSSVKAFRETGEKDVISWTTIISA-CGDNGRAGMGLRLFIEML 174

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
              V PN FT  SVL  C  +  S++  QV++ + K G   +  + NSL+ +Y + G ++
Sbjct: 175 FENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKCGCID 234

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEK-----------AFELLHEIEDTGVGTSA 489
           +A+  F  +  KNL+++N M+  +A+ ++  K           A  +  ++  +G     
Sbjct: 235 EAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPDL 294

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +T +S+L+  S + A+ +GEQIHA+ IKSGF S+  +  AL+ MY +C ++E A + F +
Sbjct: 295 FTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFLD 354

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  R +ISWTSMIT FA+HG +  AL++F  M   G +PN IT++ VL+ACSHAG++ E 
Sbjct: 355 MSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDEA 414

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
            ++F  M  E+ I   M+HY C+VD+  R G L EA + I+ M +  +  +W   +  CR
Sbjct: 415 LEYFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAGCR 474

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
            HG+ ELG +AAE +L+  P+    +++L N+Y SA  WE V+ +R+ MKE  + K    
Sbjct: 475 NHGNEELGFYAAEQLLKLKPRSTETYVVLLNMYISAERWEDVSMVRRLMKEEKVGKLKDW 534

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQY 789
           S I    +VH F      H    E++  L+ L  + K  GY    N  + + EEE+  + 
Sbjct: 535 SRISIKGEVHSFKTNNRLHNHNAELHTLLNDLVDRAKSLGYEQLENMEVIDDEEEEAEEK 594

Query: 790 LFQ----HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
            F     HSEK+AV FGL++T    PIRV K++ +C DCH  +K +S  T R I+++D  
Sbjct: 595 AFSSAVYHSEKLAVTFGLLNTPIGAPIRVIKSVTMCKDCHDFMKVVSSQTTRHIIIKDGK 654

Query: 846 RFHHIKDGKCSCND 859
           R H   +G+CSC D
Sbjct: 655 RLHKFVNGQCSCAD 668



 Score =  238 bits (608), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 274/515 (53%), Gaps = 25/515 (4%)

Query: 99  LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
           +VH+ + ++       +++ L+++Y+KCG +  A K+F ++  +R++V W+++++ YV  
Sbjct: 1   MVHAHVIKTGTHEEFFVMSFLVNVYAKCGVMVNARKVFDNLP-RRNVVVWTTLMTGYVQN 59

Query: 159 GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
            +   A+ +F +MLE G  P+ +  S  + ACS+ E++ +G   + F++K      D  +
Sbjct: 60  SQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKY-RISHDSSI 118

Query: 219 GCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           G AL  ++ K GS+D  S+ K F +  EK+ + WT +I+ C   G     +RLF++M+  
Sbjct: 119 GNALCSLYSKFGSLD--SSVKAFRETGEKDVISWTTIISACGDNGRAGMGLRLFIEMLFE 176

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
              P+ FTL+ V+S CS ++    G Q+HS + + G   ++ +  SLV +Y KC   G +
Sbjct: 177 NVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGHESNLRITNSLVYLYLKC---GCI 233

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK----------EAVKLFSDMIQGQVAPN 387
           D+++ +F+RM   N+++W A+I G+ Q+    K          EA+ ++  + +    P+
Sbjct: 234 DEAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRKPD 293

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            FT +S+L  C  L      EQ++   +K G   D  VG +L+ MY + G +E ARKAF 
Sbjct: 294 LFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKCGSIERARKAFL 353

Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
            +  + L+S+ +M+ ++A++  S+ A +L  ++   G   +  TF  +L+  S  G + +
Sbjct: 354 DMSTRTLISWTSMITSFARHGQSQHALQLFEDMRLAGFRPNQITFVGVLAACSHAGMVDE 413

Query: 508 GEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
             + +  I++  ++    +  Y  L+ M+ R   ++ AF V K M+ + N   W  +I G
Sbjct: 414 ALE-YFEIMQKEYKIKPVMDHYGCLVDMFVRLGRLDEAFDVIKRMDVEPNEFIWLLLIAG 472

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLS 598
              HG          ++L   +KP    TY+ +L+
Sbjct: 473 CRNHGNEELGFYAAEQLLK--LKPRSTETYVVLLN 505



 Score =  196 bits (499), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 220/404 (54%), Gaps = 23/404 (5%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ + + + A+     M + G+ P   T S+ L +C    +  LGK  H+ + + ++  +
Sbjct: 56  YVQNSQPEVAVEVFGDMLESGSFPSNFTLSIALNACSSLESITLGKQFHAFIIKYRISHD 115

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S I N+L SLYSK G L+ + K F+  G K D++SW+++IS+  + G+    + +F+EML
Sbjct: 116 SSIGNALCSLYSKFGSLDSSVKAFRETGEK-DVISWTTIISACGDNGRAGMGLRLFIEML 174

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
                PN++  ++V+  CS  ++  +G  ++    K G+ +S++ +  +L+ +++K G +
Sbjct: 175 FENVEPNDFTLTSVLSLCSTIQSSDLGMQVHSLSTKLGH-ESNLRITNSLVYLYLKCGCI 233

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQ-LGCPRD----------AIRLFLDMILSGFL 280
           D   A  +F++M  KN + W  MI    Q +   +D          A+ ++L +  SG  
Sbjct: 234 D--EAKNLFNRMEYKNLITWNAMIAGHAQAMDLAKDNFSAQQTGTEALGMYLKLNRSGRK 291

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD FTLS +++ CS L     G+Q+H+  I++G   DV VG +LVDMY KC   GS++ +
Sbjct: 292 PDLFTLSSILTVCSRLAALEQGEQIHAQTIKSGFLSDVVVGTALVDMYDKC---GSIERA 348

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           RK F  M    ++SWT++IT + +  G+ + A++LF DM      PN  TF  VL AC +
Sbjct: 349 RKAFLDMSTRTLISWTSMITSFARH-GQSQHALQLFEDMRLAGFRPNQITFVGVLAACSH 407

Query: 401 --LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
             ++D  +          + + + D  G  L+ M+ R GR+++A
Sbjct: 408 AGMVDEALEYFEIMQKEYKIKPVMDHYG-CLVDMFVRLGRLDEA 450


>gi|297824049|ref|XP_002879907.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325746|gb|EFH56166.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 565

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 217/539 (40%), Positives = 334/539 (61%), Gaps = 5/539 (0%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L++ Y +    G +  +RKVFD M D  + +W A+I G +Q    ++E + LF +M    
Sbjct: 31  LINGYVRA---GDLVSARKVFDEMPDRKLTTWNAMIAGLIQFE-YNEEGLSLFREMHGLG 86

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
            +P+ +T  SV      L   ++ +Q++ +A+K G  LD  V +SL  MY R+G+++D  
Sbjct: 87  FSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDGE 146

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
               S+  +NLV++NT++   A+N   E    L   ++ +G   +  TF ++LS  S + 
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLA 206

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
             G+G+QIHA  IK G  S   + ++LISMYS+C  +  A + F E ED + + W+SMI+
Sbjct: 207 IRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMIS 266

Query: 564 GFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            +  HG    A+++F  M     ++ N + ++ +L ACSH+GL  +G + F  M +++G 
Sbjct: 267 AYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGF 326

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
              ++HY C+VDLLGR+G L +A   I+SMP+  D ++W+T L AC +H + E+ +   +
Sbjct: 327 KPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVFK 386

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            ILE DP D A ++LL+N++ASA  W  V+ +RK M+++N+ KEAG SW E   +VH+F 
Sbjct: 387 EILEIDPNDSACYVLLANVHASAKRWRDVSEVRKSMRDKNVKKEAGISWFEHKGEVHQFK 446

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
           +G+ S  K+ EIY+ L +L L++K  GY PDT  VLH+++EE+K   L QHSEK+AVAF 
Sbjct: 447 MGDRSQSKSKEIYSYLKELTLEMKLKGYKPDTASVLHDMDEEEKESDLVQHSEKLAVAFA 506

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           L+   +  PIR+ KNLRVC DCH A KYIS++  REI LRD +RFHH  +GKCSC DYW
Sbjct: 507 LMILPEGAPIRIIKNLRVCSDCHVAFKYISVIMNREITLRDGSRFHHFINGKCSCGDYW 565



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 195/380 (51%), Gaps = 18/380 (4%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N LI+ Y + GDL  A K+F  M + R + +W++MI+  +      + + +F EM  LGF
Sbjct: 29  NILINGYVRAGDLVSARKVFDEMPD-RKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGF 87

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+EY   +V    +   +V+IG  I+G+ +K G  + D+ V  +L  M+++    L+  
Sbjct: 88  SPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYG-LELDLVVNSSLAHMYMRNG-KLQDG 145

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             V   M  +N V W  +I    Q GCP   + L+  M +SG  P++ T   V+S+CS+L
Sbjct: 146 EIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDL 205

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            +   G+Q+H+ AI+ G +  V V  SL+ MY+KC   G + D+ K F    D + + W+
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKC---GCLGDAAKAFSEREDEDEVMWS 262

Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGN--LLDSNVA---EQV 410
           ++I+ Y   G  D EA+KLF+ M  Q ++  N   F ++L AC +  L D  +      V
Sbjct: 263 SMISAYGFHGQGD-EAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMV 321

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN 469
             +  K G     CV    + +  R+G ++ A    +S+  + + V + T++ A   + N
Sbjct: 322 EKYGFKPGLKHYTCV----VDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKN 377

Query: 470 SEKAFELLHEIEDTGVGTSA 489
           +E A ++  EI +     SA
Sbjct: 378 AEMAQKVFKEILEIDPNDSA 397



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 195/385 (50%), Gaps = 11/385 (2%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LI+ +V+   DL SA KVFD+M ++    W  MI    Q     + + LF +M   GF P
Sbjct: 31  LINGYVRAG-DLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSP 89

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D +TL  V S  + L   + G+Q+H +AI+ GL LD+ V  SL  MY +   +G + D  
Sbjct: 90  DEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMR---NGKLQDGE 146

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
            V   M   N+++W  +I G  Q+G  +   + L+  M      PN  TF +VL +C +L
Sbjct: 147 IVIRSMPVRNLVAWNTLIMGNAQNGCPET-VLYLYKMMKISGCRPNKITFVTVLSSCSDL 205

Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
                 +Q++  A+K G +    V +SLISMY++ G + DA KAF    +++ V +++M+
Sbjct: 206 AIRGQGQQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAFSEREDEDEVMWSSMI 265

Query: 462 DAYAKNLNSEKAFELLHEI-EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSG 519
            AY  +   ++A +L + + E T +  +   F +LL   S  G   KG ++   ++ K G
Sbjct: 266 SAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYG 325

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIF 578
           F+     Y  ++ +  R   ++ A  + K M  + + + W ++++    H  A  A ++F
Sbjct: 326 FKPGLKHYTCVVDLLGRAGCLDQAEAIIKSMPIKPDPVIWKTLLSACNIHKNAEMAQKVF 385

Query: 579 YKMLADGIKPNGITYIAVLSACSHA 603
            ++L   I PN  +   VL A  HA
Sbjct: 386 KEILE--IDPND-SACYVLLANVHA 407



 Score =  117 bits (292), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 74/288 (25%), Positives = 138/288 (47%), Gaps = 2/288 (0%)

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           +R R  +    N LI+ Y R+G +  ARK F+ + ++ L ++N M+    +   +E+   
Sbjct: 18  ERMRKKNFMSSNILINGYVRAGDLVSARKVFDEMPDRKLTTWNAMIAGLIQFEYNEEGLS 77

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  E+   G     YT  S+ SG++ + ++  G+QIH   IK G E +  + ++L  MY 
Sbjct: 78  LFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYM 137

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           R   ++    V + M  RN+++W ++I G A++G     L ++  M   G +PN IT++ 
Sbjct: 138 RNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVT 197

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VLS+CS   +  +G +   +   + G    +   + ++ +  + G L +A +   S    
Sbjct: 198 VLSSCSDLAIRGQG-QQIHAEAIKIGASSVVAVVSSLISMYSKCGCLGDAAKAF-SERED 255

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
            D ++W + + A   HG  +        + EQ   +      L+ LYA
Sbjct: 256 EDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYA 303



 Score = 65.9 bits (159), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 69/296 (23%), Positives = 127/296 (42%), Gaps = 17/296 (5%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD  T   +       R+  +G+ +H    +  LE + V+ +SL  +Y + G L + 
Sbjct: 86  GFSPDEYTLGSVFSGSAGLRSVSIGQQIHGYAIKYGLELDLVVNSSLAHMYMRNGKLQDG 145

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
             + +SM   R++V+W+++I      G     ++++  M   G  PN+  F  V+ +CS+
Sbjct: 146 EIVIRSM-PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSD 204

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                 G  I+   +K G       V  +LI M+ K    L  A K F +  +++ V W+
Sbjct: 205 LAIRGQGQQIHAEAIKIGASSVVA-VVSSLISMYSKCGC-LGDAAKAFSEREDEDEVMWS 262

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQL-----H 306
            MI+     G   +AI+LF  M     +  +      ++ ACS   L   G +L      
Sbjct: 263 SMISAYGFHGQGDEAIKLFNSMAEQTEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVE 322

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITG 361
            +  + GL    CV    VD+  +    G +D +  +   M +  + + W  +++ 
Sbjct: 323 KYGFKPGLKHYTCV----VDLLGRA---GCLDQAEAIIKSMPIKPDPVIWKTLLSA 371



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 44/170 (25%), Positives = 82/170 (48%), Gaps = 6/170 (3%)

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           +S  S +G +     ++ R+ K  F S+    N LI+ Y R  ++ +A +VF EM DR +
Sbjct: 1   MSMYSKLGDLPSAVALYERMRKKNFMSS----NILINGYVRAGDLVSARKVFDEMPDRKL 56

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
            +W +MI G  +  +    L +F +M   G  P+  T  +V S  +    +S G +    
Sbjct: 57  TTWNAMIAGLIQFEYNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIG-QQIHG 115

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
              ++G+   +   + +  +  R+G L +    IRSMP+  +++ W T +
Sbjct: 116 YAIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVR-NLVAWNTLI 164



 Score = 59.7 bits (143), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 96/207 (46%), Gaps = 4/207 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  +  ++   +M   G  P+  T+  +L SC        G+ +H+   +        
Sbjct: 169 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVA 228

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE- 173
           +++SLIS+YSKCG L +A K F S     D V WSSMIS+Y   G+  +AI +F  M E 
Sbjct: 229 VVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMISAYGFHGQGDEAIKLFNSMAEQ 287

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
                NE  F  ++ ACS++     G  ++  +++   F   +     ++D+  +    L
Sbjct: 288 TEMEVNEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGC-L 346

Query: 234 ESAYKVFDKMTEK-NTVGWTLMITRCT 259
           + A  +   M  K + V W  +++ C 
Sbjct: 347 DQAEAIIKSMPIKPDPVIWKTLLSACN 373


>gi|108862088|gb|ABA96198.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 692

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/582 (37%), Positives = 339/582 (58%), Gaps = 5/582 (0%)

Query: 281 PDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           P   T    + + S L     +G+QLH+ +++     +  V  SL+ +YA+C   G +  
Sbjct: 115 PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARC---GLLHR 171

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +++VFD M   + +SWTA+IT Y+ +G   +EAV +  +     + P+ FT   VL AC 
Sbjct: 172 AQRVFDEMPHPSTVSWTALITAYMDAGDL-REAVHVARNAFANGMRPDSFTAVRVLTACA 230

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            + D    E V+  A + G A    V  + + +Y + G M  AR+ F+ + +K+ V++  
Sbjct: 231 RVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGA 290

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           MV  YA N +  +A +L   ++  GV    Y  A  LS  + +GA+  G Q    +    
Sbjct: 291 MVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 350

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F  N  +  ALI MY++C +   A+ VF++M  +++I W +MI G    G    A  +  
Sbjct: 351 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIG 410

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M   G+K N  T+I +L +C+H GLI +G ++F +M   + I  R+EHY C+VDLL R+
Sbjct: 411 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRA 470

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L EA + I  MP+ A+ ++    LG C++H + EL +H    ++  +P +   +++LS
Sbjct: 471 GLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLS 530

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y++ G WE  A +R  MKE+ + K   CSW+E + KVH+F VG+ SHP + +IY +LD
Sbjct: 531 NIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 590

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L L++K  GY P T  V+ ++E+E+K   L  HSEK+A+AF L+ T   + IRV KNLR
Sbjct: 591 ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLR 650

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VC DCHTAIK IS +T REI++RD+NRFH  +DG CSCNDYW
Sbjct: 651 VCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 692



 Score =  159 bits (401), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 227/483 (46%), Gaps = 44/483 (9%)

Query: 75  HPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           +P   T+ + LKS  R       G+ +H+   +     N  +L SL++LY++CG L+ A 
Sbjct: 114 NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 173

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F  M +    VSW+++I++Y++ G   +A+H+       G  P+ +    V+ AC+  
Sbjct: 174 RVFDEMPHP-STVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARV 232

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            ++A G  ++    + G   S V V  A +D++VK   ++  A +VFDKM +K+ V W  
Sbjct: 233 ADLATGETVWRAAEQEGIAQS-VFVATAAVDLYVKCG-EMAKAREVFDKMRDKDAVAWGA 290

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           M+      G PR+A+ LFL M   G  PD + ++G +SAC+ L     G+Q         
Sbjct: 291 MVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 350

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              +  +G +L+DMYAKC   GS  ++  VF +M   +++ W A+I G   + G +K A 
Sbjct: 351 FLDNPVLGTALIDMYAKC---GSTAEAWVVFQQMRKKDIIVWNAMILGLGMT-GHEKTAF 406

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            L   M +  V  N  TF  +L +C            +T  ++ GR       +++  +Y
Sbjct: 407 TLIGQMEKSGVKLNDNTFIGLLCSC-----------THTGLIQDGRRY----FHNMTKLY 451

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
             S R+E                Y  +VD  ++    ++A +L   I+D  +  +A    
Sbjct: 452 HISPRIE---------------HYGCIVDLLSRAGLLQEAHQL---IDDMPMPANAVILG 493

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFES-NHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +LL G          E +  ++I+   E  N   Y  L ++YS     E A ++  +M++
Sbjct: 494 ALLGGCKIHRNAELAEHVLTQLIR--LEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKE 551

Query: 553 RNV 555
           + V
Sbjct: 552 KGV 554



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 8/353 (2%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A +VFD+M   +TV WT +IT     G  R+A+ +  +   +G  PD FT   V++A
Sbjct: 169 LHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTA 228

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ +    +G+ +   A + G+A  V V  + VD+Y KC   G +  +R+VFD+M D + 
Sbjct: 229 CARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKC---GEMAKAREVFDKMRDKDA 285

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W A++ GY  S G  +EA+ LF  M    V P+ +  A  L AC  L   ++  Q   
Sbjct: 286 VAWGAMVGGYA-SNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA-I 343

Query: 413 HAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             V     LD+ V G +LI MYA+ G   +A   F+ + +K+++ +N M+       + +
Sbjct: 344 RMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEK 403

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI-YNAL 530
            AF L+ ++E +GV  +  TF  LL   +  G I  G +    + K    S     Y  +
Sbjct: 404 TAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCI 463

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
           + + SR   ++ A Q+  +M    N +   +++ G   H  A  A  +  +++
Sbjct: 464 VDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 516



 Score =  100 bits (249), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 168/406 (41%), Gaps = 49/406 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G +++A+         G  PD  T   +L +C R  +   G+ V     +  +  +
Sbjct: 194 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 253

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  + + LY KCG++ +A ++F  M +K D V+W +M+  Y + G   +A+ +F+ M 
Sbjct: 254 VFVATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAMVGGYASNGHPREALDLFLAMQ 312

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+ Y  +  + AC+    + +G      +    + D+ V +G ALIDM+ K    
Sbjct: 313 AEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGST 371

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E A+ VF +M +K+ + W  MI      G  + A  L   M  SG   +  T  G++ +
Sbjct: 372 AE-AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 430

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LDH 350
           C+                 TGL                      + D R+ F  M  L H
Sbjct: 431 CTH----------------TGL----------------------IQDGRRYFHNMTKLYH 452

Query: 351 --NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
               +     I   +   G  +EA +L  DM    +  N     ++L  C    ++ +AE
Sbjct: 453 ISPRIEHYGCIVDLLSRAGLLQEAHQLIDDM---PMPANAVILGALLGGCKIHRNAELAE 509

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
            V T  + R    +      L ++Y+  GR EDA K    + EK +
Sbjct: 510 HVLTQLI-RLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGV 554


>gi|115486938|ref|NP_001065956.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|113648463|dbj|BAF28975.1| Os12g0109300 [Oryza sativa Japonica Group]
 gi|125578262|gb|EAZ19408.1| hypothetical protein OsJ_34963 [Oryza sativa Japonica Group]
          Length = 645

 Score =  435 bits (1118), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 218/582 (37%), Positives = 339/582 (58%), Gaps = 5/582 (0%)

Query: 281 PDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           P   T    + + S L     +G+QLH+ +++     +  V  SL+ +YA+C   G +  
Sbjct: 68  PSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARC---GLLHR 124

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +++VFD M   + +SWTA+IT Y+ +G   +EAV +  +     + P+ FT   VL AC 
Sbjct: 125 AQRVFDEMPHPSTVSWTALITAYMDAGDL-REAVHVARNAFANGMRPDSFTAVRVLTACA 183

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            + D    E V+  A + G A    V  + + +Y + G M  AR+ F+ + +K+ V++  
Sbjct: 184 RVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREVFDKMRDKDAVAWGA 243

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           MV  YA N +  +A +L   ++  GV    Y  A  LS  + +GA+  G Q    +    
Sbjct: 244 MVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 303

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F  N  +  ALI MY++C +   A+ VF++M  +++I W +MI G    G    A  +  
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIG 363

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M   G+K N  T+I +L +C+H GLI +G ++F +M   + I  R+EHY C+VDLL R+
Sbjct: 364 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCIVDLLSRA 423

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L EA + I  MP+ A+ ++    LG C++H + EL +H    ++  +P +   +++LS
Sbjct: 424 GLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLIRLEPWNSGNYVMLS 483

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y++ G WE  A +R  MKE+ + K   CSW+E + KVH+F VG+ SHP + +IY +LD
Sbjct: 484 NIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 543

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L L++K  GY P T  V+ ++E+E+K   L  HSEK+A+AF L+ T   + IRV KNLR
Sbjct: 544 ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLVTGPGETIRVTKNLR 603

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VC DCHTAIK IS +T REI++RD+NRFH  +DG CSCNDYW
Sbjct: 604 VCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  159 bits (402), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 227/483 (46%), Gaps = 44/483 (9%)

Query: 75  HPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           +P   T+ + LKS  R       G+ +H+   +     N  +L SL++LY++CG L+ A 
Sbjct: 67  NPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLTLYARCGLLHRAQ 126

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F  M +    VSW+++I++Y++ G   +A+H+       G  P+ +    V+ AC+  
Sbjct: 127 RVFDEMPHP-STVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARV 185

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            ++A G  ++    + G   S V V  A +D++VK   ++  A +VFDKM +K+ V W  
Sbjct: 186 ADLATGETVWRAAEQEGIAQS-VFVATAAVDLYVKCG-EMAKAREVFDKMRDKDAVAWGA 243

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           M+      G PR+A+ LFL M   G  PD + ++G +SAC+ L     G+Q         
Sbjct: 244 MVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 303

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              +  +G +L+DMYAKC   GS  ++  VF +M   +++ W A+I G   + G +K A 
Sbjct: 304 FLDNPVLGTALIDMYAKC---GSTAEAWVVFQQMRKKDIIVWNAMILGLGMT-GHEKTAF 359

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            L   M +  V  N  TF  +L +C            +T  ++ GR       +++  +Y
Sbjct: 360 TLIGQMEKSGVKLNDNTFIGLLCSC-----------THTGLIQDGRR----YFHNMTKLY 404

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
             S R+E                Y  +VD  ++    ++A +L   I+D  +  +A    
Sbjct: 405 HISPRIE---------------HYGCIVDLLSRAGLLQEAHQL---IDDMPMPANAVILG 446

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFES-NHCIYNALISMYSRCANVEAAFQVFKEMED 552
           +LL G          E +  ++I+   E  N   Y  L ++YS     E A ++  +M++
Sbjct: 447 ALLGGCKIHRNAELAEHVLTQLIR--LEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKE 504

Query: 553 RNV 555
           + V
Sbjct: 505 KGV 507



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/353 (28%), Positives = 174/353 (49%), Gaps = 8/353 (2%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A +VFD+M   +TV WT +IT     G  R+A+ +  +   +G  PD FT   V++A
Sbjct: 122 LHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTA 181

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ +    +G+ +   A + G+A  V V  + VD+Y KC   G +  +R+VFD+M D + 
Sbjct: 182 CARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKC---GEMAKAREVFDKMRDKDA 238

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W A++ GY  S G  +EA+ LF  M    V P+ +  A  L AC  L   ++  Q   
Sbjct: 239 VAWGAMVGGYA-SNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGALDLGRQA-I 296

Query: 413 HAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             V     LD+ V G +LI MYA+ G   +A   F+ + +K+++ +N M+       + +
Sbjct: 297 RMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGLGMTGHEK 356

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI-YNAL 530
            AF L+ ++E +GV  +  TF  LL   +  G I  G +    + K    S     Y  +
Sbjct: 357 TAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCI 416

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKML 582
           + + SR   ++ A Q+  +M    N +   +++ G   H  A  A  +  +++
Sbjct: 417 VDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI 469



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 96/406 (23%), Positives = 168/406 (41%), Gaps = 49/406 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +++ G +++A+         G  PD  T   +L +C R  +   G+ V     +  +  +
Sbjct: 147 YMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQS 206

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             +  + + LY KCG++ +A ++F  M +K D V+W +M+  Y + G   +A+ +F+ M 
Sbjct: 207 VFVATAAVDLYVKCGEMAKAREVFDKMRDK-DAVAWGAMVGGYASNGHPREALDLFLAMQ 265

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  P+ Y  +  + AC+    + +G      +    + D+ V +G ALIDM+ K    
Sbjct: 266 AEGVRPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV-LGTALIDMYAKCGST 324

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
            E A+ VF +M +K+ + W  MI      G  + A  L   M  SG   +  T  G++ +
Sbjct: 325 AE-AWVVFQQMRKKDIIVWNAMILGLGMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCS 383

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LDH 350
           C+                 TGL                      + D R+ F  M  L H
Sbjct: 384 CTH----------------TGL----------------------IQDGRRYFHNMTKLYH 405

Query: 351 --NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
               +     I   +   G  +EA +L  DM    +  N     ++L  C    ++ +AE
Sbjct: 406 ISPRIEHYGCIVDLLSRAGLLQEAHQLIDDM---PMPANAVILGALLGGCKIHRNAELAE 462

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
            V T  + R    +      L ++Y+  GR EDA K    + EK +
Sbjct: 463 HVLTQLI-RLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGV 507


>gi|356540333|ref|XP_003538644.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Glycine max]
          Length = 721

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 237/661 (35%), Positives = 371/661 (56%), Gaps = 36/661 (5%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A  +F  +    T     ++ + ++   P + + L+L +  +GF  DRF+   ++ A
Sbjct: 65  LDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKA 124

Query: 293 CSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
            S+L     G ++H  A + G    D  +  +L+ MYA C   G + D+R +FD+M   +
Sbjct: 125 VSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAAC---GRIMDARFLFDKMSHRD 181

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V++W  +I GY Q+   D   +KL+ +M      P+     +VL AC +  + +  + ++
Sbjct: 182 VVTWNIMIDGYSQNAHYD-HVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIH 240

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRM-------------------------------E 440
                 G  +   +  SL++MYA  G M                               +
Sbjct: 241 QFIKDNGFRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQ 300

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           DAR  F+ + EK+LV ++ M+  YA++    +A +L +E++   +     T  S++S  +
Sbjct: 301 DARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLSVISACA 360

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++GA+ + + IH    K+GF     I NALI MY++C N+  A +VF+ M  +NVISW+S
Sbjct: 361 NVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSS 420

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI  FA HG A  A+ +F++M    I+PNG+T+I VL ACSHAGL+ EG K F SM +EH
Sbjct: 421 MINAFAMHGDADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEH 480

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I  + EHY CMVDL  R+  L +A+E I +MP   +V++W + + AC+ HG+ ELG+ A
Sbjct: 481 RISPQREHYGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFA 540

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A  +LE +P    A ++LSN+YA    W+ V  +RK MK + + KE  CS IE +N+VH 
Sbjct: 541 ATRLLELEPDHDGALVVLSNIYAKEKRWDDVGLVRKLMKHKGVSKEKACSRIEVNNEVHV 600

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F + +  H ++ EIY +LD +  ++K  GY P T+ +L +LEEE+K + +  HSEK+A+ 
Sbjct: 601 FMMADRYHKQSDEIYKKLDAVVSQLKLVGYTPSTSGILVDLEEEEKKEVVLWHSEKLALC 660

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           +GLI   K   IR+ KNLR+C DCH+ +K +S V   EIV+RD  RFHH   G CSC DY
Sbjct: 661 YGLIGERKESCIRIVKNLRICEDCHSFMKLVSKVHRIEIVMRDRTRFHHFNGGICSCRDY 720

Query: 861 W 861
           W
Sbjct: 721 W 721



 Score =  200 bits (508), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/539 (26%), Positives = 272/539 (50%), Gaps = 54/539 (10%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD-----LNEANKIFKS 138
           LL SC   R+    K +H+ + RSK++ ++++L  L+             L+ A  +F  
Sbjct: 18  LLASCKTLRHV---KQIHAQILRSKMDNSNLLLLKLVLCCCTLPSPSPSALDYALSLFSH 74

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVD-AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
           + N      +S+ +    +RG   +  + +++ +   GF  + + F  +++A S    + 
Sbjct: 75  IPNPP--TRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFPLDRFSFPPLLKAVSKLSALN 132

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           +G  I+G   K G+F +D  +  ALI M+      +++ + +FDKM+ ++ V W +MI  
Sbjct: 133 LGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARF-LFDKMSHRDVVTWNIMIDG 191

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
            +Q       ++L+ +M  SG  PD   L  V+SAC+     + GK +H +    G  + 
Sbjct: 192 YSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSYGKAIHQFIKDNGFRVG 251

Query: 318 VCVGCSLVDMYAKCTVD----------------------------GSVDDSRKVFDRMLD 349
             +  SLV+MYA C                               G V D+R +FDRM++
Sbjct: 252 SHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYAKLGMVQDARFIFDRMVE 311

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +++ W+A+I+GY +S  +  EA++LF++M + ++ P+  T  SV+ AC N+     A+ 
Sbjct: 312 KDLVCWSAMISGYAES-YQPLEALQLFNEMQRRRIVPDQITMLSVISACANVGALVQAKW 370

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++T+A K G      + N+LI MYA+ G +  AR+ FE++  KN++S+++M++A+A + +
Sbjct: 371 IHTYADKNGFGRTLPINNALIDMYAKCGNLVKAREVFENMPRKNVISWSSMINAFAMHGD 430

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII---KSGFESNHCI 526
           ++ A  L H +++  +  +  TF  +L   S  G + +G++  + +I   +   +  H  
Sbjct: 431 ADSAIALFHRMKEQNIEPNGVTFIGVLYACSHAGLVEEGQKFFSSMINEHRISPQREH-- 488

Query: 527 YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG------FAA-RALEI 577
           Y  ++ +Y R  ++  A ++ + M    NVI W S+++    HG      FAA R LE+
Sbjct: 489 YGCMVDLYCRANHLRKAMELIETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLEL 547



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 243/541 (44%), Gaps = 93/541 (17%)

Query: 30  PSSSPP--------FIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTY 81
           PS SP         F   P      SN+L+   + G   +   +L L  ++   P LD +
Sbjct: 58  PSPSPSALDYALSLFSHIPNPPTRFSNQLLRQFSRGPTPENTLSLYLHLRRNGFP-LDRF 116

Query: 82  SL--LLKSCIRSRNFHLGKLVHSLLTR-SKLEPNSVILNSLISLYSKCGDLNEANKIFKS 138
           S   LLK+  +    +LG  +H L ++      +  I ++LI++Y+ CG + +A  +F  
Sbjct: 117 SFPPLLKAVSKLSALNLGLEIHGLASKFGFFHADPFIQSALIAMYAACGRIMDARFLFDK 176

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
           M + RD+V+W+ MI  Y         + ++ EM   G  P+      V+ AC++  N++ 
Sbjct: 177 MSH-RDVVTWNIMIDGYSQNAHYDHVLKLYEEMKTSGTEPDAIILCTVLSACAHAGNLSY 235

Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL------------------------ 233
           G  I+ F+   G F     +  +L++M+   G++ L                        
Sbjct: 236 GKAIHQFIKDNG-FRVGSHIQTSLVNMYANCGAMHLAREVYDQLPSKHMVVSTAMLSGYA 294

Query: 234 -----ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
                + A  +FD+M EK+ V W+ MI+   +   P +A++LF +M     +PD+ T+  
Sbjct: 295 KLGMVQDARFIFDRMVEKDLVCWSAMISGYAESYQPLEALQLFNEMQRRRIVPDQITMLS 354

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+SAC+ +      K +H++A + G    + +  +L+DMYAKC   G++  +R+VF+ M 
Sbjct: 355 VISACANVGALVQAKWIHTYADKNGFGRTLPINNALIDMYAKC---GNLVKAREVFENMP 411

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             NV+SW+++I  +   G  D  A+ LF  M +  + PN  TF  VL AC          
Sbjct: 412 RKNVISWSSMINAFAMHGDAD-SAIALFHRMKEQNIEPNGVTFIGVLYAC---------- 460

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNTMVDA 463
              +HA                      G +E+ +K F S+  ++ +S     Y  MVD 
Sbjct: 461 ---SHA----------------------GLVEEGQKFFSSMINEHRISPQREHYGCMVDL 495

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           Y +  +  KA EL   IE      +   + SL+S   + G I  GE    R+++   E +
Sbjct: 496 YCRANHLRKAMEL---IETMPFPPNVIIWGSLMSACQNHGEIELGEFAATRLLE--LEPD 550

Query: 524 H 524
           H
Sbjct: 551 H 551


>gi|224103989|ref|XP_002313273.1| predicted protein [Populus trichocarpa]
 gi|222849681|gb|EEE87228.1| predicted protein [Populus trichocarpa]
          Length = 680

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 236/678 (34%), Positives = 387/678 (57%), Gaps = 18/678 (2%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G   D  T+  +LK+C  S +   G+ +H ++ +   + +  + N+L+  Y  CG L + 
Sbjct: 2   GVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLGFDSDVFVGNTLLLFYGNCGGLKDV 61

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACS 191
            ++F  M  +RD+VSW+S+I  +   G   +AIH+F EM L  GF PN     +V+  C+
Sbjct: 62  KRVFDEM-LERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPVCA 120

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
             E+   G  I+ +++K G  DS V VG AL+D++ K    ++ + +VFD+++E+N V W
Sbjct: 121 GLEDGVTGRQIHCYVVKTG-LDSQVTVGNALVDVYGKCGY-VKDSRRVFDEISERNGVSW 178

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
             +IT    L   +DA+ +F  MI  G  P+  T S ++    EL+LF  GK++H +++R
Sbjct: 179 NAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLR 238

Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
            GL  D+ V  +L+DMYAK    G    +  VF+++ + N++SW A++  + Q+   +  
Sbjct: 239 FGLESDIFVANALIDMYAK---SGRSLQASNVFNQIGEKNIVSWNAMVANFAQNR-LELA 294

Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
           AV L   M      PN  TF +VL AC  +      ++++  A++ G ++D  V N+L  
Sbjct: 295 AVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNALTD 354

Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
           MYA+ G +  AR+ F+ +  ++ VSYN ++  Y++  N  ++  L  E+   G+     +
Sbjct: 355 MYAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVS 413

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           +  ++S  +++ A+ +G+++H   ++    ++  I NAL+  Y +C  ++ A +VF+++ 
Sbjct: 414 YMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDLAGKVFRQIP 473

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
            R+  SW SMI G+   G    A+ +F  M  DG++ + ++YIAVLSACSH GL+ EG K
Sbjct: 474 SRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKK 533

Query: 612 HFRSMYDEHGIVQRME----HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +F     EH  VQ ++    HYACMVDLLGR+G + EA++ I S+P+  D  VW   LGA
Sbjct: 534 YF-----EHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKLIESLPIEPDANVWGALLGA 588

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
           CR+HG  EL   AAE + +  PQ    + +LSN+YA AG W+    +RK MK R   K  
Sbjct: 589 CRIHGYIELAHWAAEHLFKLKPQHSGYYSVLSNMYAEAGKWDEANQVRKLMKSRGAKKNP 648

Query: 728 GCSWIEADNKVHKFHVGE 745
           GCSW++ DN+VH F  GE
Sbjct: 649 GCSWVQIDNQVHAFVAGE 666



 Score =  262 bits (670), Expect = 5e-67,   Method: Compositional matrix adjust.
 Identities = 173/560 (30%), Positives = 307/560 (54%), Gaps = 27/560 (4%)

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           +G   +++ F  V++AC+++ +V  G  I+G + K G FDSDV VG  L+ +F      L
Sbjct: 1   MGVRLDDHTFPFVLKACADSLSVQKGREIHGVVFKLG-FDSDVFVGNTLL-LFYGNCGGL 58

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSA 292
           +   +VFD+M E++ V W  +I   +  G   +AI LF +M L SGF P+  ++  V+  
Sbjct: 59  KDVKRVFDEMLERDVVSWNSVIGVFSVHGFYAEAIHLFCEMNLRSGFRPNMVSIVSVLPV 118

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+ LE   +G+Q+H + ++TGL   V VG +LVD+Y KC   G V DSR+VFD + + N 
Sbjct: 119 CAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKC---GYVKDSRRVFDEISERNG 175

Query: 353 MSWTAIIT--GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +SW AIIT   Y++   R+++A+++F  MI G V PN  TF+S+L     L   +  +++
Sbjct: 176 VSWNAIITSLAYLE---RNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEI 232

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +  +++ G   D  V N+LI MYA+SGR   A   F  + EKN+VS+N MV  +A+N   
Sbjct: 233 HGFSLRFGLESDIFVANALIDMYAKSGRSLQASNVFNQIGEKNIVSWNAMVANFAQNRLE 292

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
             A +L+ +++  G   ++ TF ++L   + IG +  G++IHAR I++G   +  + NAL
Sbjct: 293 LAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIHARAIRTGSSVDLFVSNAL 352

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
             MY++C  +  A +VFK +  R+ +S+  +I G+++    + +L +F +M   G+K + 
Sbjct: 353 TDMYAKCGCLNLARRVFK-ISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDV 411

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA------CMVDLLGRSGSLTE 644
           ++Y+ V+SAC++   + +G        + HG+  R   +        ++D   + G +  
Sbjct: 412 VSYMGVISACANLAALKQG-------KEVHGLAVRKHLHTHLFIANALLDFYIKCGRIDL 464

Query: 645 ALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLSNLYA 703
           A +  R +P S D   W + +    + G+  +  +  E + E   + D  ++I + +  +
Sbjct: 465 AGKVFRQIP-SRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVEYDSVSYIAVLSACS 523

Query: 704 SAGHWEYVANIRKRMKERNL 723
             G  E      + M+ +N+
Sbjct: 524 HGGLVEEGKKYFEHMQVQNI 543



 Score =  211 bits (538), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 146/538 (27%), Positives = 271/538 (50%), Gaps = 21/538 (3%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++  + G  P++ +   +L  C    +   G+ +H  + ++ L+    + N+L+ +Y KC
Sbjct: 98  EMNLRSGFRPNMVSIVSVLPVCAGLEDGVTGRQIHCYVVKTGLDSQVTVGNALVDVYGKC 157

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G + ++ ++F  + ++R+ VSW+++I+S     +  DA+ MF  M++ G  PN   FS++
Sbjct: 158 GYVKDSRRVFDEI-SERNGVSWNAIITSLAYLERNQDALEMFRLMIDGGVKPNSVTFSSM 216

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
           +      +    G  I+GF L+ G  +SD+ V  ALIDM+ K    L+ A  VF+++ EK
Sbjct: 217 LPVLVELKLFDFGKEIHGFSLRFG-LESDIFVANALIDMYAKSGRSLQ-ASNVFNQIGEK 274

Query: 247 NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLH 306
           N V W  M+    Q      A+ L   M   G +P+  T + V+ AC+ +     GK++H
Sbjct: 275 NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEIPNSVTFTNVLPACARIGFLRPGKEIH 334

Query: 307 SWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
           + AIRTG ++D+ V  +L DMYAKC   G ++ +R+VF   L   V S+  +I GY Q+ 
Sbjct: 335 ARAIRTGSSVDLFVSNALTDMYAKC---GCLNLARRVFKISLRDEV-SYNILIIGYSQT- 389

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
               E+++LF +M    +  +  ++  V+ AC NL      ++V+  AV++       + 
Sbjct: 390 TNCSESLRLFLEMGIKGMKLDVVSYMGVISACANLAALKQGKEVHGLAVRKHLHTHLFIA 449

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+L+  Y + GR++ A K F  +  ++  S+N+M+  Y        A  L   +++ GV 
Sbjct: 450 NALLDFYIKCGRIDLAGKVFRQIPSRDTASWNSMILGYGMLGELTIAINLFEAMKEDGVE 509

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
             + ++ ++LS  S  G + +G++    +     +     Y  ++ +  R   +E A ++
Sbjct: 510 YDSVSYIAVLSACSHGGLVEEGKKYFEHMQVQNIKPTQMHYACMVDLLGRAGLIEEAVKL 569

Query: 547 FKEM---EDRNVISWTSMITGFAKHGF---AARALEIFYKMLADGIKPNGITYIAVLS 598
            + +    D NV  W +++     HG+   A  A E  +K+     KP    Y +VLS
Sbjct: 570 IESLPIEPDANV--WGALLGACRIHGYIELAHWAAEHLFKL-----KPQHSGYYSVLS 620



 Score =  162 bits (411), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 204/397 (51%), Gaps = 18/397 (4%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R Q A+    LM   G  P+  T+S +L   +  + F  GK +H    R  LE +  + N
Sbjct: 190 RNQDALEMFRLMIDGGVKPNSVTFSSMLPVLVELKLFDFGKEIHGFSLRFGLESDIFVAN 249

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +LI +Y+K G   +A+ +F  +G K +IVSW++M++++     ++ A+ +  +M   G  
Sbjct: 250 ALIDMYAKSGRSLQASNVFNQIGEK-NIVSWNAMVANFAQNRLELAAVDLVRQMQADGEI 308

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
           PN   F+ V+ AC+    +  G  I+   ++ G    D+ V  AL DM+ K G ++L  A
Sbjct: 309 PNSVTFTNVLPACARIGFLRPGKEIHARAIRTGS-SVDLFVSNALTDMYAKCGCLNL--A 365

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF K++ ++ V + ++I   +Q     +++RLFL+M + G   D  +  GV+SAC+ L
Sbjct: 366 RRVF-KISLRDEVSYNILIIGYSQTTNCSESLRLFLEMGIKGMKLDVVSYMGVISACANL 424

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                GK++H  A+R  L   + +  +L+D Y KC   G +D + KVF ++   +  SW 
Sbjct: 425 AALKQGKEVHGLAVRKHLHTHLFIANALLDFYIKC---GRIDLAGKVFRQIPSRDTASWN 481

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVA--EQVYT 412
           ++I GY    G    A+ LF  M +  V  +  ++ +VL AC  G L++      E +  
Sbjct: 482 SMILGYGML-GELTIAINLFEAMKEDGVEYDSVSYIAVLSACSHGGLVEEGKKYFEHMQV 540

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
             +K  +    C    ++ +  R+G +E+A K  ESL
Sbjct: 541 QNIKPTQMHYAC----MVDLLGRAGLIEEAVKLIESL 573


>gi|297794613|ref|XP_002865191.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311026|gb|EFH41450.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 697

 Score =  434 bits (1117), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 257/736 (34%), Positives = 390/736 (52%), Gaps = 92/736 (12%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+EA ++F  + +   +  ++ MIS Y    + VDA+++F EM                 
Sbjct: 51  LDEAREVFDQVPSPH-VSLYTKMISGYTRSNRLVDALNLFDEM----------------- 92

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
                + V+   +I G            CV C           D+++A K+FD+M E++ 
Sbjct: 93  --PLRDVVSWNSMISG------------CVECG----------DIDTAVKMFDEMPERSV 128

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V WT M+  C + G    A RLF  M +                          K + +W
Sbjct: 129 VSWTAMVNGCFRFGMVDQAERLFCQMPV--------------------------KDIAAW 162

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
                         ++V  Y +    G VDD+ K+F +M   NV+SWT +I G  Q+  R
Sbjct: 163 N-------------AMVHGYLQF---GKVDDALKLFKQMPRKNVISWTTMICGLDQNE-R 205

Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
             EA+ LF +M++  +     TF  V+ AC N    ++  QV+   +K G   ++ V  S
Sbjct: 206 SGEALNLFKNMLRCCIKSTSRTFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTAS 265

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
           LI++YA   R ED+RK F  +  + +  +  ++  Y+ N   E A  +  E+    +  +
Sbjct: 266 LITLYANCKRTEDSRKVFGEMVHEKVAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPN 325

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
             TFAS L+  S++G +  G++IH   +K G  +   + N+L+ MYS   NV  A  VF 
Sbjct: 326 QSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFI 385

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           E+  ++++SW S+I G A+HG    A  IF +M+    +P+ IT+  +LSACSH G + +
Sbjct: 386 EIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQK 445

Query: 609 GWKHFRSMYDEHG---IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           G K F   Y   G   I ++++HY CMVD+LGR G L EA + I SM +  + +VW   L
Sbjct: 446 GRKLF--YYISSGLNHIDRKIQHYTCMVDILGRCGELKEAEKLIESMVVKPNEMVWLALL 503

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
            ACR+H D + G+ AA  I   D +  AA++LLSN+YASAG W  V+ +R +MK++ ++K
Sbjct: 504 SACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRWSSVSKLRVKMKQKGIMK 563

Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
           + G SW+    K H+F  G+   P  L I+ +L+ L  K+KE GY+PD    LH++E+EQ
Sbjct: 564 KPGSSWVVIRGKKHEFFSGD--RPHCLRIFEKLEFLREKLKELGYVPDYRSALHDVEDEQ 621

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           K + L+ HSE++A+AFGLI+T +   + V KNLRVC DCHT IK IS V G +IVLRD  
Sbjct: 622 KEEMLWYHSERLAIAFGLINTVEGSTVTVMKNLRVCEDCHTVIKLISRVVGCKIVLRDPT 681

Query: 846 RFHHIKDGKCSCNDYW 861
           RFHH K+G CSC DYW
Sbjct: 682 RFHHFKNGMCSCGDYW 697



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 243/509 (47%), Gaps = 49/509 (9%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P+  +   +IS Y++   L +A  +F  M   RD+VSW+SMIS  V  G    A+ MF E
Sbjct: 64  PHVSLYTKMISGYTRSNRLVDALNLFDEMP-LRDVVSWNSMISGCVECGDIDTAVKMFDE 122

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M E         ++A++  C        G +     L C     D+    A++  +++ G
Sbjct: 123 MPERSVVS----WTAMVNGC-----FRFGMVDQAERLFCQMPVKDIAAWNAMVHGYLQFG 173

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
            VD   A K+F +M  KN + WT MI    Q     +A+ LF +M+         T + V
Sbjct: 174 KVD--DALKLFKQMPRKNVISWTTMICGLDQNERSGEALNLFKNMLRCCIKSTSRTFTCV 231

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++AC+    F  G Q+H + I++G   +  V  SL+ +YA C      +DSRKVF  M+ 
Sbjct: 232 ITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCK---RTEDSRKVFGEMVH 288

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             V  WTA+++GY     + ++A+ +FS+MI+  + PN  TFAS L +C  L   +  ++
Sbjct: 289 EKVAVWTALLSGY-SLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKE 347

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++  AVK G      VGNSL+ MY+ SG + DA   F  +F+K++VS+N+++   A++  
Sbjct: 348 IHGVAVKLGLGTVAFVGNSLVVMYSDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCAQHGR 407

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            + AF +  ++          TF  LLS  S  G + KG ++    I SG   NH     
Sbjct: 408 GKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLFY-YISSGL--NHI---- 460

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
                                 DR +  +T M+    + G    A ++   M+   +KPN
Sbjct: 461 ----------------------DRKIQHYTCMVDILGRCGELKEAEKLIESMV---VKPN 495

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYD 618
            + ++A+LSAC     +  G K   ++++
Sbjct: 496 EMVWLALLSACRMHSDVDRGEKAAAAIFN 524



 Score =  117 bits (294), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 158/310 (50%), Gaps = 22/310 (7%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T++ ++ +C  +  FH+G  VH  + +S       +  SLI+LY+ C    ++ K+F  M
Sbjct: 227 TFTCVITACANAPAFHMGTQVHGFIIKSGFLYEEYVTASLITLYANCKRTEDSRKVFGEM 286

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
            +++ +  W++++S Y    K  DA+++F EM+     PN+  F++ + +CS    +  G
Sbjct: 287 VHEK-VAVWTALLSGYSLNRKHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWG 345

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             I+G  +K G   +   VG +L+ M+   S ++  A  VF ++ +K+ V W  +I  C 
Sbjct: 346 KEIHGVAVKLG-LGTVAFVGNSLVVMY-SDSGNVNDAVSVFIEIFKKSIVSWNSIIVGCA 403

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA-LDV 318
           Q G  + A  +F  MI     PD  T +G++SACS       G++L  + I +GL  +D 
Sbjct: 404 QHGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLQKGRKLF-YYISSGLNHIDR 462

Query: 319 CVG--CSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            +     +VD+  +C   G + ++ K+ + M +  N M W A+++           A ++
Sbjct: 463 KIQHYTCMVDILGRC---GELKEAEKLIESMVVKPNEMVWLALLS-----------ACRM 508

Query: 376 FSDMIQGQVA 385
            SD+ +G+ A
Sbjct: 509 HSDVDRGEKA 518



 Score = 67.4 bits (163), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 102/209 (48%), Gaps = 5/209 (2%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN  + + A+     M +    P+  T++  L SC        GK +H +  +  L  
Sbjct: 301 YSLNR-KHEDALNVFSEMIRNSILPNQSTFASGLNSCSALGTLDWGKEIHGVAVKLGLGT 359

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
            + + NSL+ +YS  G++N+A  +F  +  K+ IVSW+S+I      G+   A  +F +M
Sbjct: 360 VAFVGNSLVVMYSDSGNVNDAVSVFIEIF-KKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGS 230
           + L   P+E  F+ ++ ACS+   +  G  ++ ++     + D  +     ++D+  +  
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLQKGRKLFYYISSGLNHIDRKIQHYTCMVDILGRCG 478

Query: 231 VDLESAYKVFDKMTEK-NTVGWTLMITRC 258
            +L+ A K+ + M  K N + W  +++ C
Sbjct: 479 -ELKEAEKLIESMVVKPNEMVWLALLSAC 506


>gi|302791503|ref|XP_002977518.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
 gi|300154888|gb|EFJ21522.1| hypothetical protein SELMODRAFT_107192 [Selaginella moellendorffii]
          Length = 652

 Score =  434 bits (1116), Expect = e-119,   Method: Compositional matrix adjust.
 Identities = 252/745 (33%), Positives = 402/745 (53%), Gaps = 98/745 (13%)

Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
           ++ + G +  A +IF ++ + RD  SW  M+S Y   G   +A  +F  M          
Sbjct: 1   MFGRLGCVERARQIFDAIAD-RDSFSWGIMLSIYARSGDLSNAKGVFDRMPRWSLG---- 55

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
            ++A++ A + +     GH                                 E A  +FD
Sbjct: 56  SWTALLSAFALS-----GH--------------------------------HEEAKTLFD 78

Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
            M E++ + WT+M+T         DA   F  M      P+R                  
Sbjct: 79  TMQERDLIAWTIMLTVLATFSNIEDAKYHFDQM------PER------------------ 114

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
              L +W                  M A     G ++++R+ FD+M + N+ SWT++++ 
Sbjct: 115 --DLVAWTA----------------MLAANAERGQMENARETFDQMPERNLFSWTSLLSA 156

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           Y +SG   K A ++F  M +     N   + ++L       D   A++ +    +R    
Sbjct: 157 YGRSGDV-KAAGRVFDSMPEW----NLVAWTAMLTGYSLSGDVVRAKRAFDSMPER---- 207

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D     +++S YA +G +   R+ F+ + E++L+S+ TMV A  +N   E++ EL   + 
Sbjct: 208 DLIAWTAMLSAYAFNGHLRYTREIFQRMPERDLISWATMVAALVENDLLEESKELFDRMP 267

Query: 482 -----DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
                  G+  +  TF +LL   S +GA+ +G +IHA + + GF+++  + NAL++ Y R
Sbjct: 268 RHCALSKGMTPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGR 327

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  +  A  VF  M  R+VISW+SMI+ FA+ G    A+E++++ML++G  P+ I +I+V
Sbjct: 328 CGALGDAKIVFDGMRRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISV 387

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L ACS++G++      FRS+  +  +   +EHYACMVD+LGR+G L +A + +R MP   
Sbjct: 388 LFACSNSGVVEASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHP 447

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
             L++ T L AC+++ D E G+ AAE++ E DP++ + +I L+N+Y++A   +  A IRK
Sbjct: 448 GPLLYMTMLSACKLYTDVERGEAAAEVVFELDPENSSPYITLANIYSAAKRPKDAARIRK 507

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M+ER + K+ GCSWIE  ++VH+F  G+  HP+  EIYAE+ +L  ++KE GY  DT  
Sbjct: 508 LMEERGIKKKPGCSWIEVLDRVHEFIAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKV 567

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
           VL ++EE++K   L+ HSEK+A+AFGLIST    P+R+ KNLRVC DCH A K IS VTG
Sbjct: 568 VLQDVEEDEKENLLWYHSEKLAIAFGLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTG 627

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REI++RD+NRFHH ++G CSCNDYW
Sbjct: 628 REILVRDTNRFHHFQNGMCSCNDYW 652



 Score =  116 bits (291), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 202/463 (43%), Gaps = 89/463 (19%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL-EPNSVILN 117
           ++ A +  D M ++    DL  ++ +L +     N   G++ ++  T  ++ E N     
Sbjct: 101 IEDAKYHFDQMPER----DLVAWTAMLAA-----NAERGQMENARETFDQMPERNLFSWT 151

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           SL+S Y + GD+  A ++F SM  + ++V+W++M++ Y   G  V A   F  M E    
Sbjct: 152 SLLSAYGRSGDVKAAGRVFDSM-PEWNLVAWTAMLTGYSLSGDVVRAKRAFDSMPERDLI 210

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
                ++A++ A +       GH+ Y                                  
Sbjct: 211 ----AWTAMLSAYAFN-----GHLRY--------------------------------TR 229

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-----ILSGFLPDRFTLSGVVSA 292
           ++F +M E++ + W  M+    +     ++  LF  M     +  G  P+R T   ++ A
Sbjct: 230 EIFQRMPERDLISWATMVAALVENDLLEESKELFDRMPRHCALSKGMTPNRVTFITLLDA 289

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS L     G+++H+     G   D+ V  +LV+ Y +C   G++ D++ VFD M   +V
Sbjct: 290 CSFLGALAEGRKIHAAVAERGFDTDLVVSNALVNFYGRC---GALGDAKIVFDGMRRRDV 346

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW+++I+ + Q  GR  EA++L+  M+     P+   F SVL AC N   S V E    
Sbjct: 347 ISWSSMISAFAQR-GRVDEAMELYHRMLSEGTLPDDIIFISVLFACSN---SGVVE---- 398

Query: 413 HAVKRGRALDDCVGNS-----------LISMYARSGRMEDARKAFESL-FEKNLVSYNTM 460
                G      VG++           ++ +  R+G++ DA      + F    + Y TM
Sbjct: 399 ---ASGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTM 455

Query: 461 VDA---YAKNLNSEKAFELLHEIEDTGVGTSAY-TFASLLSGA 499
           + A   Y      E A E++ E++     +S Y T A++ S A
Sbjct: 456 LSACKLYTDVERGEAAAEVVFELDPE--NSSPYITLANIYSAA 496


>gi|224055823|ref|XP_002298671.1| predicted protein [Populus trichocarpa]
 gi|222845929|gb|EEE83476.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/601 (36%), Positives = 355/601 (59%), Gaps = 35/601 (5%)

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ +   + K++H+  +++GL     +  +L+D Y KC +   + D+  +FD M   + 
Sbjct: 12  CTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNL---LQDAHYLFDEMPQRDH 68

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW +I+T Y Q+   +K            ++ P+HF +A++LKAC +L    + +QV+ 
Sbjct: 69  VSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQVHA 128

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
             V      DD V +SL+ MYA+ G    AR  F+S+  K  VS+  M+  YA++   ++
Sbjct: 129 RFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDE 188

Query: 473 AFELLH-------------------------------EIEDTGVG-TSAYTFASLLSGAS 500
           A EL                                 E+   GV        +S++   +
Sbjct: 189 AMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACA 248

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++  +G G+QIH  +I SG+ES   I NAL+ MY++C+++ AA  VF  M  R+V+SWTS
Sbjct: 249 NLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCSDILAARNVFNRMLHRDVVSWTS 308

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I G A+HG A  AL+++ +M+   IKPN +T++ ++ ACSHAGL+S+G K F++M +++
Sbjct: 309 IIVGAAQHGRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDY 368

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
            I   ++ + C +DLL RSG L EA + I++MP   D   W   L AC+ HG+TE+G   
Sbjct: 369 RISPSLQLFTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRI 428

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ +L  +  +P+ ++LLSN+YA AG WE ++ +RK M +  + ++ G S I+   +   
Sbjct: 429 ADRLLSLNMHEPSTYVLLSNVYAGAGKWEQMSRVRKLMTDMEVKRKPGYSSIDLGKESQV 488

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           FH GET HP   EI+  L +L  ++++ GY+PDT++VLH++EE++K + LF HSE+ AVA
Sbjct: 489 FHAGETCHPMKDEIFGLLKELDAEMRKRGYIPDTSYVLHDMEEQEKERELFWHSERWAVA 548

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           +GL+       IR+ KNLR+CGDCHT +K  S +  +EI++RD+ R+HH KDG+CSCND+
Sbjct: 549 YGLLKAVPGTVIRIVKNLRICGDCHTFLKLTSSIVHKEIIVRDATRYHHFKDGRCSCNDF 608

Query: 861 W 861
           W
Sbjct: 609 W 609



 Score =  155 bits (393), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 132/516 (25%), Positives = 231/516 (44%), Gaps = 84/516 (16%)

Query: 78  LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           + +Y   LK C + +     K +H+ + +S L     + N+L+  Y KC  L +A+ +F 
Sbjct: 2   IPSYLHRLKLCTKHQAPLNAKKIHAQIVKSGLNQCQPLPNTLLDAYGKCNLLQDAHYLFD 61

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENV 196
            M  +RD VSW+S++++Y         + +F  M       P+ + ++ +++AC++  ++
Sbjct: 62  EM-PQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSL 120

Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
            +G  ++   +   + D DV V  +L+DM+ K  +    A  VFD +  K +V WT M++
Sbjct: 121 RLGKQVHARFVLSPFVDDDV-VKSSLVDMYAKCGLP-SIARSVFDSILVKTSVSWTAMLS 178

Query: 257 RCTQLGCPRDAIRLFL---------------DMILSGF-----------------LPDRF 284
              + G   +A+ LFL                ++ SG+                 + D  
Sbjct: 179 GYARSGLKDEAMELFLRTPVRNLYSWTALISGLVQSGYCIDGCYMFIEMRREGVDIVDPL 238

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
            LS VV AC+ L +   GKQ+H   I +G    + +  +LVDMYAKC+    +  +R VF
Sbjct: 239 VLSSVVGACANLAVLGLGKQIHGLVIGSGYESCLFISNALVDMYAKCS---DILAARNVF 295

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
           +RML  +V+SWT+II G  Q  GR KEA+ L+  M+  ++ PN  TF  ++ AC      
Sbjct: 296 NRMLHRDVVSWTSIIVGAAQH-GRAKEALDLYDQMVLAEIKPNEVTFVGLIYAC------ 348

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNT 459
                  +HA                      G +   RK F+++ E   +S     +  
Sbjct: 349 -------SHA----------------------GLVSKGRKLFKAMIEDYRISPSLQLFTC 379

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            +D  +++ +  +A +L+  +          T+A+LLS     G    G +I  R++   
Sbjct: 380 FLDLLSRSGHLNEAEDLIKTMPHK---PDEPTWAALLSACKHHGNTEMGVRIADRLLSLN 436

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
                  Y  L ++Y+     E   +V K M D  V
Sbjct: 437 MHEP-STYVLLSNVYAGAGKWEQMSRVRKLMTDMEV 471



 Score =  139 bits (349), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 100/399 (25%), Positives = 192/399 (48%), Gaps = 44/399 (11%)

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL- 280
           L+D + K ++ L+ A+ +FD+M +++ V W  ++T   Q   P   + +F  M  +  L 
Sbjct: 43  LLDAYGKCNL-LQDAHYLFDEMPQRDHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQ 101

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD F  + ++ AC+ L     GKQ+H+  + +    D  V  SLVDMYAKC   G    +
Sbjct: 102 PDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDMYAKC---GLPSIA 158

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF-----------SDMIQGQVAPNH- 388
           R VFD +L    +SWTA+++GY +SG +D EA++LF           + +I G V   + 
Sbjct: 159 RSVFDSILVKTSVSWTAMLSGYARSGLKD-EAMELFLRTPVRNLYSWTALISGLVQSGYC 217

Query: 389 --------------------FTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--VG 426
                                  +SV+ AC NL    + +Q+  H +  G   + C  + 
Sbjct: 218 IDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQI--HGLVIGSGYESCLFIS 275

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+L+ MYA+   +  AR  F  +  +++VS+ +++   A++  +++A +L  ++    + 
Sbjct: 276 NALVDMYAKCSDILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLYDQMVLAEIK 335

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQ 545
            +  TF  L+   S  G + KG ++   +I+      +  ++   + + SR  ++  A  
Sbjct: 336 PNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQLFTCFLDLLSRSGHLNEAED 395

Query: 546 VFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLA 583
           + K M  + +  +W ++++    HG     + I  ++L+
Sbjct: 396 LIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLS 434



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 38/274 (13%)

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           +FT D +      PD   Y+ LLK+C    +  LGK VH+    S    + V+ +SL+ +
Sbjct: 94  MFTTDRL-----QPDHFVYATLLKACASLCSLRLGKQVHARFVLSPFVDDDVVKSSLVDM 148

Query: 123 YSKCGDLNEANKIFKSMGNK------------------------------RDIVSWSSMI 152
           Y+KCG  + A  +F S+  K                              R++ SW+++I
Sbjct: 149 YAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLKDEAMELFLRTPVRNLYSWTALI 208

Query: 153 SSYVNRGKQVDAIHMFVEMLELGF-CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           S  V  G  +D  +MF+EM   G    +    S+V+ AC+N   + +G  I+G ++  GY
Sbjct: 209 SGLVQSGYCIDGCYMFIEMRREGVDIVDPLVLSSVVGACANLAVLGLGKQIHGLVIGSGY 268

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
            +S + +  AL+DM+ K S D+ +A  VF++M  ++ V WT +I    Q G  ++A+ L+
Sbjct: 269 -ESCLFISNALVDMYAKCS-DILAARNVFNRMLHRDVVSWTSIIVGAAQHGRAKEALDLY 326

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
             M+L+   P+  T  G++ ACS   L + G++L
Sbjct: 327 DQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKL 360



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 58/228 (25%), Positives = 116/228 (50%), Gaps = 9/228 (3%)

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEK 452
           LK C        A++++   VK G  L+ C  + N+L+  Y +   ++DA   F+ + ++
Sbjct: 9   LKLCTKHQAPLNAKKIHAQIVKSG--LNQCQPLPNTLLDAYGKCNLLQDAHYLFDEMPQR 66

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQI 511
           + VS+ +++ AY +     K   + H +  T  +    + +A+LL   +S+ ++  G+Q+
Sbjct: 67  DHVSWASILTAYNQAKLPNKTLSIFHYMFTTDRLQPDHFVYATLLKACASLCSLRLGKQV 126

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           HAR + S F  +  + ++L+ MY++C     A  VF  +  +  +SWT+M++G+A+ G  
Sbjct: 127 HARFVLSPFVDDDVVKSSLVDMYAKCGLPSIARSVFDSILVKTSVSWTAMLSGYARSGLK 186

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
             A+E+F +        N  ++ A++S    +G   +G   F  M  E
Sbjct: 187 DEAMELFLRTPVR----NLYSWTALISGLVQSGYCIDGCYMFIEMRRE 230



 Score = 45.8 bits (107), Expect = 0.095,   Method: Compositional matrix adjust.
 Identities = 29/119 (24%), Positives = 59/119 (49%), Gaps = 1/119 (0%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG-KLVHSLLTRSKLEPNSVI 115
           GR ++A+   D M      P+  T+  L+ +C  +     G KL  +++   ++ P+  +
Sbjct: 317 GRAKEALDLYDQMVLAEIKPNEVTFVGLIYACSHAGLVSKGRKLFKAMIEDYRISPSLQL 376

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
               + L S+ G LNEA  + K+M +K D  +W++++S+  + G     + +   +L L
Sbjct: 377 FTCFLDLLSRSGHLNEAEDLIKTMPHKPDEPTWAALLSACKHHGNTEMGVRIADRLLSL 435


>gi|15223594|ref|NP_176062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75173061|sp|Q9FXB9.1|PPR84_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g56690, mitochondrial; Flags: Precursor
 gi|9954744|gb|AAG09095.1|AC009323_6 Hypothetical protein [Arabidopsis thaliana]
 gi|332195302|gb|AEE33423.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 258/765 (33%), Positives = 404/765 (52%), Gaps = 63/765 (8%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           K +  +L R+ L    V  +  IS  S+ G +NEA K F S+  K  I SW+S++S Y +
Sbjct: 2   KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFK-AIGSWNSIVSGYFS 60

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G   +A  +F EM E                                         +V 
Sbjct: 61  NGLPKEARQLFDEMSE----------------------------------------RNVV 80

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
               L+  ++K  + +E A  VF+ M E+N V WT M+    Q G   +A  LF  M   
Sbjct: 81  SWNGLVSGYIKNRMIVE-ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM--- 136

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
              P+R  +S  V       L   G+   +  +   + +   V  +  +M      +G V
Sbjct: 137 ---PERNEVSWTVMFGG---LIDDGRIDKARKLYDMMPVKDVVAST--NMIGGLCREGRV 188

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           D++R +FD M + NV++WT +ITGY Q+  R   A KLF      +V P     +     
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNN-RVDVARKLF------EVMPEKTEVSWTSML 241

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
            G  L   + +      V   + +  C  N++I  +   G +  AR+ F+ + +++  ++
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKPVIAC--NAMIVGFGEVGEISKARRVFDLMEDRDNATW 299

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+ AY +     +A +L  +++  GV  S  +  S+LS  +++ ++  G Q+HA +++
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
             F+ +  + + L++MY +C  +  A  VF     +++I W S+I+G+A HG    AL+I
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F++M + G  PN +T IA+L+ACS+AG + EG + F SM  +  +   +EHY+C VD+LG
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLG 479

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G + +A+E I SM +  D  VW   LGAC+ H   +L + AA+ + E +P +   ++L
Sbjct: 480 RAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVL 539

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE-TSHPKTLEIYA 756
           LS++ AS   W  VA +RK M+  N+ K  GCSWIE   KVH F  G   +HP+   I  
Sbjct: 540 LSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILM 599

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
            L++    ++E GY PD + VLH+++EE+KV  L +HSE++AVA+GL+   +  PIRV K
Sbjct: 600 MLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMK 659

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           NLRVCGDCH AIK IS VT REI+LRD+NRFHH  +G+CSC DYW
Sbjct: 660 NLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 57/204 (27%), Positives = 99/204 (48%), Gaps = 20/204 (9%)

Query: 66  LDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           LDL   M ++G  P   +   +L  C    +   G+ VH+ L R + + +  + + L+++
Sbjct: 316 LDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTM 375

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
           Y KCG+L +A  +F    +K DI+ W+S+IS Y + G   +A+ +F EM   G  PN+  
Sbjct: 376 YVKCGELVKAKLVFDRFSSK-DIIMWNSIISGYASHGLGEEALKIFHEMPSSGTMPNKVT 434

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL------IDMFVK-GSVDLES 235
             A++ ACS    +  G  I+  +      +S  CV   +      +DM  + G VD   
Sbjct: 435 LIAILTACSYAGKLEEGLEIFESM------ESKFCVTPTVEHYSCTVDMLGRAGQVD--K 486

Query: 236 AYKVFDKMTEK-NTVGWTLMITRC 258
           A ++ + MT K +   W  ++  C
Sbjct: 487 AMELIESMTIKPDATVWGALLGAC 510


>gi|297792601|ref|XP_002864185.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310020|gb|EFH40444.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 588

 Score =  434 bits (1116), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 218/560 (38%), Positives = 349/560 (62%), Gaps = 5/560 (0%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G QLH + +++GL+L   V  +L++ Y+K  +     DSR+ F+     +  +W++II+ 
Sbjct: 34  GLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPF---DSRRAFEDSPQKSATTWSSIISC 90

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q+      +++    M+ G + P+     S  K+CG L   ++ + V+  ++K G   
Sbjct: 91  FAQNE-LPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHCLSMKTGYDA 149

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  VG+SL+ MYA+ G +  ARK F+ +  +N+V+++ M+  YA+   +E+A  L  E  
Sbjct: 150 DVFVGSSLVDMYAKCGEIVYARKMFDEMPLRNVVTWSGMMYGYAQMGENEEALWLFKEAL 209

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
              +  + Y+F++++S  ++   +  G QI    IKS F+S+  + ++L+S+YS+C ++E
Sbjct: 210 FENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLE 269

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A+QVF E+  RN+  W +M+   A+H    + +E+F +M   G+KPN IT++ VL+ACS
Sbjct: 270 GAYQVFDEVPMRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACS 329

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGL+ EG K++  +  E  I    +HYA +VD+LGR+G L EALE + +MP+     VW
Sbjct: 330 HAGLVDEG-KYYFDLMKESRIEPTDKHYASLVDMLGRAGKLEEALEIVTNMPIDPTESVW 388

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
              L +C +H +TEL   AA+ + E  P     HI LSN YA+ G +E  A  RK +++R
Sbjct: 389 GALLTSCTIHKNTELAAFAADKVFELGPVSSGMHISLSNAYAADGRFEDAAKARKLLRDR 448

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
              KE G SW+E  NKVH F  GE  H ++ EIY +L +L  ++++ GY+ DT++VL E+
Sbjct: 449 GEKKETGLSWVEERNKVHTFAAGERRHERSKEIYEKLAELGEEMEKAGYVADTSYVLREV 508

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           + ++K Q +  HSE++A+AFGLI+    +PIRV KNLRVCGDCH AIK++S+ T R I++
Sbjct: 509 DGDEKNQTIRYHSERLAIAFGLITFPADRPIRVMKNLRVCGDCHNAIKFMSICTRRVIIV 568

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFH  +DGKCSCNDYW
Sbjct: 569 RDNNRFHRFEDGKCSCNDYW 588



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 195/408 (47%), Gaps = 29/408 (7%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL S  RSR+   G  +H  + +S L    ++ N+LI+ YSK     ++ + F+    ++
Sbjct: 21  LLLSSARSRSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFED-SPQK 79

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
              +WSS+IS +        ++    +M+     P+++   +  ++C       IG  ++
Sbjct: 80  SATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVH 139

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
              +K GY D+DV VG +L+DM+ K   ++  A K+FD+M  +N V W+ M+    Q+G 
Sbjct: 140 CLSMKTGY-DADVFVGSSLVDMYAKCG-EIVYARKMFDEMPLRNVVTWSGMMYGYAQMGE 197

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ LF + +      + ++ S V+S C+   L   G+Q+    I++       VG S
Sbjct: 198 NEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSS 257

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           LV +Y+KC   G ++ + +VFD +   N+  W A++    Q     K  ++LF  M    
Sbjct: 258 LVSLYSKC---GDLEGAYQVFDEVPMRNLGIWNAMLKACAQHSHTQK-VIELFKRMKLSG 313

Query: 384 VAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGR-ALDDCVGNSLISMYARSGRME 440
           + PN  TF +VL AC    L+D     + Y   +K  R    D    SL+ M  R+G++E
Sbjct: 314 MKPNFITFLNVLNACSHAGLVDEG---KYYFDLMKESRIEPTDKHYASLVDMLGRAGKLE 370

Query: 441 DA------------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           +A               + +L     +  NT + A+A    ++K FEL
Sbjct: 371 EALEIVTNMPIDPTESVWGALLTSCTIHKNTELAAFA----ADKVFEL 414



 Score =  134 bits (338), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/339 (29%), Positives = 158/339 (46%), Gaps = 8/339 (2%)

Query: 24  SRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQ-KAIFTLDLMTQKGNHPDLDTYS 82
           S+  LP  S   F   P  S    + +I       +   ++  L  M      PD     
Sbjct: 61  SKSQLPFDSRRAFEDSPQKSATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLP 120

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
              KSC       +GK VH L  ++  + +  + +SL+ +Y+KCG++  A K+F  M   
Sbjct: 121 SATKSCGILSRCDIGKSVHCLSMKTGYDADVFVGSSLVDMYAKCGEIVYARKMFDEMP-L 179

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           R++V+WS M+  Y   G+  +A+ +F E L      N+Y FS VI  C+N+  + +G  I
Sbjct: 180 RNVVTWSGMMYGYAQMGENEEALWLFKEALFENLAVNDYSFSTVISVCANSTLLELGRQI 239

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
            G  +K   FDS   VG +L+ ++ K   DLE AY+VFD++  +N   W  M+  C Q  
Sbjct: 240 QGLCIKSS-FDSSSFVGSSLVSLYSKCG-DLEGAYQVFDEVPMRNLGIWNAMLKACAQHS 297

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             +  I LF  M LSG  P+  T   V++ACS   L   GK        + +        
Sbjct: 298 HTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYA 357

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIIT 360
           SLVDM  +    G ++++ ++   M +D     W A++T
Sbjct: 358 SLVDMLGRA---GKLEEALEIVTNMPIDPTESVWGALLT 393



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 85/181 (46%), Gaps = 4/181 (2%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           ++S ++  C  S    LG+ +  L  +S  + +S + +SL+SLYSKCGDL  A ++F  +
Sbjct: 219 SFSTVISVCANSTLLELGRQIQGLCIKSSFDSSSFVGSSLVSLYSKCGDLEGAYQVFDEV 278

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
              R++  W++M+ +          I +F  M   G  PN   F  V+ ACS+   V  G
Sbjct: 279 P-MRNLGIWNAMLKACAQHSHTQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEG 337

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
              +  + +     +D     +L+DM  +    LE A ++   M    T   W  ++T C
Sbjct: 338 KYYFDLMKESRIEPTDKHYA-SLVDMLGRAG-KLEEALEIVTNMPIDPTESVWGALLTSC 395

Query: 259 T 259
           T
Sbjct: 396 T 396



 Score = 60.1 bits (144), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 50/185 (27%), Positives = 85/185 (45%), Gaps = 11/185 (5%)

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
           LLS A S  +I KG Q+H  I+KSG      + N LI+ YS+      + + F++   ++
Sbjct: 22  LLSSARS-RSIVKGLQLHGYIVKSGLSLIPLVANNLINFYSKSQLPFDSRRAFEDSPQKS 80

Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HF 613
             +W+S+I+ FA++     +LE   KM+A  ++P+     +   +C        G   H 
Sbjct: 81  ATTWSSIISCFAQNELPWMSLEFLRKMMAGSLRPDDHVLPSATKSCGILSRCDIGKSVHC 140

Query: 614 RSM---YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
            SM   YD    V      + +VD+  + G +  A +    MPL  +V+ W   +     
Sbjct: 141 LSMKTGYDADVFVG-----SSLVDMYAKCGEIVYARKMFDEMPLR-NVVTWSGMMYGYAQ 194

Query: 671 HGDTE 675
            G+ E
Sbjct: 195 MGENE 199



 Score = 39.7 bits (91), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 25/96 (26%), Positives = 42/96 (43%)

Query: 59  VQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
            QK I     M   G  P+  T+  +L +C  +     GK    L+  S++EP      S
Sbjct: 299 TQKVIELFKRMKLSGMKPNFITFLNVLNACSHAGLVDEGKYYFDLMKESRIEPTDKHYAS 358

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           L+ +  + G L EA +I  +M        W ++++S
Sbjct: 359 LVDMLGRAGKLEEALEIVTNMPIDPTESVWGALLTS 394


>gi|302796918|ref|XP_002980220.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
 gi|300151836|gb|EFJ18480.1| hypothetical protein SELMODRAFT_112433 [Selaginella moellendorffii]
          Length = 739

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/682 (35%), Positives = 377/682 (55%), Gaps = 39/682 (5%)

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
            D+D  +G  L+ ++ K    L+ A+  FD++  KN   WT++I+   Q G  R+A+ LF
Sbjct: 65  LDADTYLGNNLVRVYGKFG-GLDRAWAAFDRIAAKNVFSWTIVISAFAQNGHHREALVLF 123

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
             M   G   +  TL+ V+  CS ++    G+ +H   I      DV +G +LV+MY+KC
Sbjct: 124 RQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVI--AAKKDVVIGNALVNMYSKC 181

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
              GS+ ++R  F  M+  +V+SWT +IT   + G  + EAV++F +M+   VAPN  + 
Sbjct: 182 ---GSLREARASFQEMVVRDVVSWTTMITALSEHGEWN-EAVEIFWEMVSENVAPNEISC 237

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESL 449
            +VL AC NL D +    ++      G  LD    V N+LI  Y R G   DAR+ F+SL
Sbjct: 238 LAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDARRVFDSL 297

Query: 450 FE--KNLVSYNTMVDAYAKNLNSEKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAI 505
               +N VS+ +M+ AY  N  ++   EL  E+   +         +  +L   SS+ A+
Sbjct: 298 QHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCVLEACSSLSAL 357

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             G Q+H  I+ +GF     +  A+++MY +C ++  A +VF  M+ RN+I+W SM+ G+
Sbjct: 358 KVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKARNMIAWNSMMGGY 417

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
            +HG   RAL++F     DG+ P+ IT++ +L+ACSHAG++  G  HF S+  + G+   
Sbjct: 418 TQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPGVWHFGSIRADFGMEPS 477

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPL---SADVLV-WRTFLGACRVHGDTELGKHAA 681
           ++HY CMVD+LGR+G L  A   +  MP     AD  V W   L +C+VH D +     +
Sbjct: 478 VDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLASCKVHTDVKRAARIS 537

Query: 682 EMILEQD----------------PQDPAAHILLSNLYASAGHWEYVANIRKRMKE---RN 722
            ++  +                     A  ++LSN+YA A  WE +  +R  + E   + 
Sbjct: 538 SVLSAKKKKLLSSSSSGSGSWHLKNSAAPLVMLSNIYAQAKKWEEMTGVRNEITEEWSKG 597

Query: 723 LI--KEAGCSWIEADNKVHKFHVGETS-HPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
           +I  ++ GCS+IE +  +H+F  G+   HP+   I +E+ +L   IK  GY+PDT+ V+H
Sbjct: 598 MITSRQRGCSFIEVEGAIHEFVAGKLHLHPEHKGIDSEMKRLEELIKSAGYVPDTSVVMH 657

Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
           ++EE +K   L QHSE++A+AFGL+       +RV  NLR+C DCH A+K IS   GREI
Sbjct: 658 DVEEAEKEGVLHQHSERMAIAFGLMRGGSDTIVRVVNNLRICSDCHAAVKLISKTVGREI 717

Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
           ++RD+ RFHH   G+CSC DYW
Sbjct: 718 LVRDTRRFHHFASGECSCQDYW 739



 Score =  186 bits (471), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 134/493 (27%), Positives = 248/493 (50%), Gaps = 27/493 (5%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
           +H  +    L+ ++ + N+L+ +Y K G L+ A   F  +  K ++ SW+ +IS++   G
Sbjct: 56  LHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAK-NVFSWTIVISAFAQNG 114

Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A+ +F +M   G   NE   +AV+  CS+ +++A G  I+G ++       DV +G
Sbjct: 115 HHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAA---KKDVVIG 171

Query: 220 CALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
            AL++M+ K GS  L  A   F +M  ++ V WT MIT  ++ G   +A+ +F +M+   
Sbjct: 172 NALVNMYSKCGS--LREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSEN 229

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD--VCVGCSLVDMYAKCTVDGS 336
             P+  +   V+ ACS L   +  + +H +    GL LD  + V  +L+  Y +C   GS
Sbjct: 230 VAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRC---GS 286

Query: 337 VDDSRKVFDRMLDH---NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP--NHFTF 391
             D+R+VFD  L H   N +SW ++I  Y  S  + K  V+L+ +MIQ + +   +   +
Sbjct: 287 PSDARRVFDS-LQHSARNAVSWASMIAAYT-SNEQAKAGVELYQEMIQREESKKMDPVAY 344

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
             VL+AC +L    V  QV+   V  G   +  +  ++++MY + G + +AR+ F+ +  
Sbjct: 345 LCVLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMKA 404

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +N++++N+M+  Y ++ + ++A +L       GV     TF ++L+  S  G +  G   
Sbjct: 405 RNMIAWNSMMGGYTQHGHPKRALQLFELACLDGVLPDEITFVTILTACSHAGMVKPG-VW 463

Query: 512 HARIIKS--GFESNHCIYNALISMYSRCANVEAAFQVFKEM-----EDRNVISWTSMITG 564
           H   I++  G E +   Y  ++ M  R   ++AA ++ + M          + W +++  
Sbjct: 464 HFGSIRADFGMEPSVDHYVCMVDMLGRAGWLDAAERLVERMPAFSNPADEFVPWMALLAS 523

Query: 565 FAKHGFAARALEI 577
              H    RA  I
Sbjct: 524 CKVHTDVKRAARI 536



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 190/379 (50%), Gaps = 20/379 (5%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           ++LH   I  GL  D  +G +LV +Y K    G +D +   FDR+   NV SWT +I+ +
Sbjct: 54  EELHCRMIAQGLDADTYLGNNLVRVYGKF---GGLDRAWAAFDRIAAKNVFSWTIVISAF 110

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            Q+ G  +EA+ LF  M +  V  N  T A+VL  C ++ D      ++   +   +  D
Sbjct: 111 AQN-GHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAKK--D 167

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             +GN+L++MY++ G + +AR +F+ +  +++VS+ TM+ A +++    +A E+  E+  
Sbjct: 168 VVIGNALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVS 227

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH--CIYNALISMYSRCANV 540
             V  +  +  ++L   S++G   +   IH  I   G E +    + N LI  Y RC + 
Sbjct: 228 ENVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSP 287

Query: 541 EAAFQVFKEMED--RNVISWTSMITGFAKHGFAARALEIFYKMLA--DGIKPNGITYIAV 596
             A +VF  ++   RN +SW SMI  +  +  A   +E++ +M+   +  K + + Y+ V
Sbjct: 288 SDARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLCV 347

Query: 597 LSACSHAGLISEGWKHFRSMYDE---HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
           L ACS    +  G    R +++E    G    +     +V++  + GSL EA E    M 
Sbjct: 348 LEACSSLSALKVG----RQVHEEIVAAGFGDELPLAGAIVNMYCKCGSLVEAREVFDGMK 403

Query: 654 LSADVLVWRTFLGACRVHG 672
            + +++ W + +G    HG
Sbjct: 404 -ARNMIAWNSMMGGYTQHG 421



 Score =  155 bits (393), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 106/350 (30%), Positives = 179/350 (51%), Gaps = 15/350 (4%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++A+     M ++G   +  T + +L  C   ++   G+ +H  +  +K   + V
Sbjct: 112 QNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAAK--KDVV 169

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           I N+L+++YSKCG L EA   F+ M   RD+VSW++MI++    G+  +A+ +F EM+  
Sbjct: 170 IGNALVNMYSKCGSLREARASFQEM-VVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSE 228

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVK-GSVD 232
              PNE    AV+ ACSN  + +   +I+ F+   G   D  + V   LI  + + GS  
Sbjct: 229 NVAPNEISCLAVLGACSNLGDRSQVRVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPS 288

Query: 233 LESAYKVFDKM--TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL--SGFLPDRFTLSG 288
              A +VFD +  + +N V W  MI   T     +  + L+ +MI        D      
Sbjct: 289 --DARRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYLC 346

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V+ ACS L     G+Q+H   +  G   ++ +  ++V+MY KC   GS+ ++R+VFD M 
Sbjct: 347 VLEACSSLSALKVGRQVHEEIVAAGFGDELPLAGAIVNMYCKC---GSLVEAREVFDGMK 403

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             N+++W +++ GY Q  G  K A++LF       V P+  TF ++L AC
Sbjct: 404 ARNMIAWNSMMGGYTQH-GHPKRALQLFELACLDGVLPDEITFVTILTAC 452



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 164/295 (55%), Gaps = 9/295 (3%)

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
           E+++   + +G   D  +GN+L+ +Y + G ++ A  AF+ +  KN+ S+  ++ A+A+N
Sbjct: 54  EELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFDRIAAKNVFSWTIVISAFAQN 113

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
            +  +A  L  ++E  GV  +  T A++L   SSI  +  G  IH R+I +  + +  I 
Sbjct: 114 GHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAGGRSIHGRVIAA--KKDVVIG 171

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           NAL++MYS+C ++  A   F+EM  R+V+SWT+MIT  ++HG    A+EIF++M+++ + 
Sbjct: 172 NALVNMYSKCGSLREARASFQEMVVRDVVSWTTMITALSEHGEWNEAVEIFWEMVSENVA 231

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV--QRMEHYACMVDLLGRSGSLTEA 645
           PN I+ +AVL ACS+ G  S+  +         G+   +++     ++   GR GS ++A
Sbjct: 232 PNEISCLAVLGACSNLGDRSQV-RVIHEFIASGGLELDKKLVVANTLIHTYGRCGSPSDA 290

Query: 646 LEFIRSMPLSA-DVLVWRTFLGACRVHGDTELGKHA-AEMILEQDPQ--DPAAHI 696
                S+  SA + + W + + A   +   + G     EMI  ++ +  DP A++
Sbjct: 291 RRVFDSLQHSARNAVSWASMIAAYTSNEQAKAGVELYQEMIQREESKKMDPVAYL 345



 Score = 84.0 bits (206), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 56/186 (30%), Positives = 96/186 (51%), Gaps = 9/186 (4%)

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
           A  FA  L  A  + A+   E++H R+I  G +++  + N L+ +Y +   ++ A+  F 
Sbjct: 37  AEDFARELRNARCLAAV---EELHCRMIAQGLDADTYLGNNLVRVYGKFGGLDRAWAAFD 93

Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
            +  +NV SWT +I+ FA++G    AL +F +M  +G+K N +T  AVL  CS    ++ 
Sbjct: 94  RIAAKNVFSWTIVISAFAQNGHHREALVLFRQMEREGVKANEVTLAAVLGICSSIKDLAG 153

Query: 609 GWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           G   H R +  +  +V        +V++  + GSL EA    + M +  DV+ W T + A
Sbjct: 154 GRSIHGRVIAAKKDVVI----GNALVNMYSKCGSLREARASFQEMVVR-DVVSWTTMITA 208

Query: 668 CRVHGD 673
              HG+
Sbjct: 209 LSEHGE 214


>gi|449435966|ref|XP_004135765.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 226/661 (34%), Positives = 378/661 (57%), Gaps = 47/661 (7%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++G +L+ G+F  D  V  AL+  +      + + A KVF  +   N   W ++I  C +
Sbjct: 52  LHGLVLRSGHF-QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                 AI  +  M++    P++FT   +  ACS  +    G+Q+H   ++ G+  DV +
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             + + MYA     G ++D+RK+F    + +V+ W  +I GY++ G              
Sbjct: 170 KSAGIHMYASF---GRLEDARKMFYSG-ESDVVCWNTMIDGYLKCG-------------- 211

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
                        VL+A   L      + + +              N +I+  A+ G + 
Sbjct: 212 -------------VLEAAKGLFAQMPVKNIGSW-------------NVMINGLAKGGNLG 245

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           DARK F+ + E++ +S+++MVD Y      ++A E+  +++        +  +S+L+  S
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACS 305

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           +IGAI +G  +HA + ++  + +  +  AL+ MY++C  ++  ++VF+EM++R + +W +
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI G A HG A  ALE+F K+    +KPNGIT + VL+AC+HAG + +G + F++M + +
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           G+   +EHY CMVDLLGRSG  +EA + I SMP+  +  VW   LGACR+HG+ +L +  
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
            +++LE +PQ+   ++LLSN+YA  G ++ V+ IRK MK+R +    G S ++ +  VH+
Sbjct: 486 GKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGIKTVPGVSIVDLNGTVHE 545

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F +G+ SHP+  EIY +L  +  +++  G+ PDT+ VL +++EE+K   +  HSEK+A+A
Sbjct: 546 FKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIA 605

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLI+T   K I + KNLRVC DCH+A K IS +  REI++RD  R+HH K+G CSC D+
Sbjct: 606 FGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDF 665

Query: 861 W 861
           W
Sbjct: 666 W 666



 Score =  144 bits (364), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 126/538 (23%), Positives = 234/538 (43%), Gaps = 98/538 (18%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIYH------LNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           P  S+  F  +  +S P  N  I++      L + ++ KAI+    M      P+  TY 
Sbjct: 78  PHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDAR-PNKFTYP 136

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            L K+C  ++    G+ +H  + +  +  +  I ++ I +Y+  G L +A K+F S   +
Sbjct: 137 TLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYS--GE 194

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
            D+V W++MI  Y+  G    A  +F +M                      +N+   +++
Sbjct: 195 SDVVCWNTMIDGYLKCGVLEAAKGLFAQM--------------------PVKNIGSWNVM 234

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
              L K G                     +L  A K+FD+M+E++ + W+ M+      G
Sbjct: 235 INGLAKGG---------------------NLGDARKLFDEMSERDEISWSSMVDGYISAG 273

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             ++A+ +F  M      P RF LS V++ACS +     G+ +H++  R  + LD  +G 
Sbjct: 274 RYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT 333

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +L+DMYAKC   G +D   +VF+ M +  + +W A+I G +   GR ++A++LFS + +G
Sbjct: 334 ALLDMYAKC---GRLDMGWEVFEEMKEREIFTWNAMIGG-LAIHGRAEDALELFSKLQEG 389

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
           ++ PN  T   VL AC                                   A +G ++  
Sbjct: 390 RMKPNGITLVGVLTAC-----------------------------------AHAGFVDKG 414

Query: 443 RKAFESLFE-----KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
            + F+++ E       L  Y  MVD   ++    +A +L++ +    +  +A  + +LL 
Sbjct: 415 LRIFQTMREFYGVDPELEHYGCMVDLLGRSGLFSEAEDLINSMP---MKPNAAVWGALLG 471

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
                G     E++  +I+      N   Y  L ++Y++    +   ++ K M+DR +
Sbjct: 472 ACRIHGNFDLAERV-GKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKDRGI 528



 Score = 82.4 bits (202), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 82/363 (22%), Positives = 137/363 (37%), Gaps = 73/363 (20%)

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARS--GRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           Q++   ++ G   D  V  +L+  YA       + A K F S+   N+  +N ++    +
Sbjct: 51  QLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF------ 520
           N    KA      +       + +T+ +L    S   A+ +G QIH  ++K G       
Sbjct: 111 NNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 521 ------------------------ESNHCIYNALISMYSRCANVEA-------------- 542
                                   ES+   +N +I  Y +C  +EA              
Sbjct: 170 KSAGIHMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIG 229

Query: 543 -----------------AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
                            A ++F EM +R+ ISW+SM+ G+   G    ALEIF +M  + 
Sbjct: 230 SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREE 289

Query: 586 IKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
            +P      +VL+ACS+ G I +G W H  +    + I         ++D+  + G L  
Sbjct: 290 TRPGRFILSSVLAACSNIGAIDQGRWVH--AYLKRNSIKLDAVLGTALLDMYAKCGRLDM 347

Query: 645 ALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLY 702
             E    M    ++  W   +G   +HG  E    A E+   L++    P    L+  L 
Sbjct: 348 GWEVFEEMK-EREIFTWNAMIGGLAIHGRAE---DALELFSKLQEGRMKPNGITLVGVLT 403

Query: 703 ASA 705
           A A
Sbjct: 404 ACA 406



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 62/268 (23%), Positives = 120/268 (44%), Gaps = 20/268 (7%)

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS--RCANVEAAFQVFKEMEDR 553
           L  + SI ++    Q+H  +++SG   +H +  AL+  Y+    +N + A +VF  + + 
Sbjct: 37  LFDSKSITSLQYLTQLHGLVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNP 96

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           NV  W  +I G  ++    +A+  + +M+ D  +PN  TY  +  ACS A  + EG +  
Sbjct: 97  NVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEG-RQI 154

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
                +HGI   +   +  + +    G L +A +   S    +DV+ W T +      G 
Sbjct: 155 HGHVVKHGIGSDVHIKSAGIHMYASFGRLEDARKMFYSG--ESDVVCWNTMIDGYLKCGV 212

Query: 674 TELGKHAAEMILEQDP-QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
            E    AA+ +  Q P ++  +  ++ N  A  G+      +   M ER+ I     SW 
Sbjct: 213 LE----AAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI-----SW- 262

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQ 760
              + +   ++    + + LEI+ ++ +
Sbjct: 263 ---SSMVDGYISAGRYKEALEIFQQMQR 287


>gi|15226299|ref|NP_178260.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216969|sp|Q9ZVF4.1|PP140_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g01510, mitochondrial; Flags: Precursor
 gi|3785980|gb|AAC67327.1| hypothetical protein [Arabidopsis thaliana]
 gi|330250369|gb|AEC05463.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 584

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/561 (39%), Positives = 337/561 (60%), Gaps = 6/561 (1%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K++H+  +RTG +    +   L  +     V G +  +R+VFD M    +  W  +  GY
Sbjct: 28  KKIHAIVLRTGFSEKNSL---LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V++     E++ L+  M    V P+ FT+  V+KA   L D +    ++ H VK G    
Sbjct: 85  VRNQ-LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V   L+ MY + G +  A   FES+  K+LV++N  +    +  NS  A E  +++  
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             V   ++T  S+LS    +G++  GE+I+ R  K   + N  + NA + M+ +C N EA
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A  +F+EM+ RNV+SW++MI G+A +G +  AL +F  M  +G++PN +T++ VLSACSH
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323

Query: 603 AGLISEGWKHFRSMY--DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           AGL++EG ++F  M   ++  +  R EHYACMVDLLGRSG L EA EFI+ MP+  D  +
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
           W   LGAC VH D  LG+  A++++E  P   + H+LLSN+YA+AG W+ V  +R +M++
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
               K A  S +E + K+H F+ G+ SHP++  IY +LD++  KI++ GY+PDT  V H+
Sbjct: 444 LGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHD 503

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +E E+K   L  HSEK+A+AFGLI      PIRV KNLR C DCH   K++S +T  EI+
Sbjct: 504 VEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEII 563

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD NRFHH ++G CSC ++W
Sbjct: 564 MRDKNRFHHFRNGVCSCKEFW 584



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 10/348 (2%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           K +H+++ R+     + +L  L+      GD+  A ++F  M   R I  W+++   YV 
Sbjct: 28  KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR-IFLWNTLFKGYVR 86

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                +++ ++ +M +LG  P+E+ +  V++A S   + + G  ++  ++K G F     
Sbjct: 87  NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG-FGCLGI 145

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           V   L+ M++K   +L SA  +F+ M  K+ V W   +  C Q G    A+  F  M   
Sbjct: 146 VATELVMMYMKFG-ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
               D FT+  ++SAC +L     G++++  A +  +  ++ V  + +DM+ KC   G+ 
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC---GNT 261

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           + +R +F+ M   NV+SW+ +I GY  +G   +EA+ LF+ M    + PN+ TF  VL A
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGD-SREALTLFTTMQNEGLRPNYVTFLGVLSA 320

Query: 398 CGNLLDSNVAEQVYTHAVKRG-RALDDCVGN--SLISMYARSGRMEDA 442
           C +    N  ++ ++  V+   + L+    +   ++ +  RSG +E+A
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368



 Score =  101 bits (252), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 3/244 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  PD  TY  ++K+  +  +F  G  +H+ + +       ++   L+ +Y K G+
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGE 159

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L+ A  +F+SM  K D+V+W++ ++  V  G    A+  F +M       + +   +++ 
Sbjct: 160 LSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLS 218

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC    ++ IG  IY    K    D ++ V  A +DM +K   + E+A  +F++M ++N 
Sbjct: 219 ACGQLGSLEIGEEIYDRARK-EEIDCNIIVENARLDMHLKCG-NTEAARVLFEEMKQRNV 276

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W+ MI      G  R+A+ LF  M   G  P+  T  GV+SACS   L   GK+  S 
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336

Query: 309 AIRT 312
            +++
Sbjct: 337 MVQS 340


>gi|449443909|ref|XP_004139718.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  434 bits (1115), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 345/609 (56%), Gaps = 52/609 (8%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQLH+  I+TG   D      ++   A  + D  +D +R VF +M + N   W  I+   
Sbjct: 36  KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRD--IDYARAVFRQMPEPNCFCWNTILRVL 93

Query: 363 VQSGGR--DKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            ++       EA+ LFS M+  G+V PN FTF SVLKAC         +Q++   VK G 
Sbjct: 94  AETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGF 153

Query: 420 ALDDCVGNSLISMYARSGRMEDA------------------------------------- 442
             D+ V ++L+ MY     MEDA                                     
Sbjct: 154 HEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDG 213

Query: 443 ----------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
                     +  F+ + ++++VS+N M+  YA+N +  +A  L  E++ + +  +  T 
Sbjct: 214 QVRLGDIKSAKNLFDEMPQRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTL 273

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S+L   + IGA+  G+ IH    K+  E +  + +AL+ MYS+C +++ A QVF+ +  
Sbjct: 274 VSVLPAIARIGALELGKWIHLYAGKNKIEIDDVLGSALVDMYSKCGSIDEALQVFETLPK 333

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           RN I+W+++I  FA HG A  A+  F+ M   G+ PN + YI +LSACSHAGL+ EG   
Sbjct: 334 RNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSF 393

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F  M    G+  R+EHY CMVDLLGR+G L EA E IR+MP+  D ++W+  LGAC++H 
Sbjct: 394 FSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHK 453

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           + ++G+  AE ++E  P D  +++ LSNLYAS G+WE VA +R +MK  ++ K+ GCSWI
Sbjct: 454 NLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWI 513

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E    +H+F V + SH K  EI A L ++++K++  GY P+T  V    +E+++ + L  
Sbjct: 514 EIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQY 573

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSEKIAVAFGLIST+   P+++ KNLR+C DCH ++K IS++  R+I++RD  RFH  + 
Sbjct: 574 HSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEH 633

Query: 853 GKCSCNDYW 861
           G CSC DYW
Sbjct: 634 GSCSCMDYW 642



 Score =  127 bits (319), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 191/421 (45%), Gaps = 73/421 (17%)

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK---QVDAIHMFVEMLELGFC-PNEYCF 183
           D++ A  +F+ M    +   W++++           Q +A+ +F  ML  G   PN + F
Sbjct: 67  DIDYARAVFRQMPEP-NCFCWNTILRVLAETNDEHLQSEALMLFSAMLCDGRVKPNRFTF 125

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG--------CALID----MFVKGSV 231
            +V++AC+    +  G  I+G ++K G+ + +  +         CA+++    +F K  V
Sbjct: 126 PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVV 185

Query: 232 D---------------------------------LESAYKVFDKMTEKNTVGWTLMITRC 258
           D                                 ++SA  +FD+M +++ V W +MI+  
Sbjct: 186 DFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPQRSVVSWNVMISGY 245

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q G   +AI LF +M  S   P+  TL  V+ A + +     GK +H +A +  + +D 
Sbjct: 246 AQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDD 305

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +G +LVDMY+KC   GS+D++ +VF+ +   N ++W+AII  +    GR ++A+  F  
Sbjct: 306 VLGSALVDMYSKC---GSIDEALQVFETLPKRNAITWSAIIGAFAMH-GRAEDAIIHFHL 361

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--------NSLI 430
           M +  V PN   +  +L AC +          ++H VK        VG          ++
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVK-------VVGLQPRIEHYGCMV 414

Query: 431 SMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN-SEKAFELLHEIEDTGVG 486
            +  R+G +E+A +   ++  E + V +  ++ A    KNL   E+  E L E+     G
Sbjct: 415 DLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSG 474

Query: 487 T 487
           +
Sbjct: 475 S 475



 Score = 84.0 bits (206), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 102/205 (49%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +AI     M      P+  T   +L +  R     LGK +H    ++K+E + V
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKIEIDDV 306

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKCG ++EA ++F+++  KR+ ++WS++I ++   G+  DAI  F  M + 
Sbjct: 307 LGSALVDMYSKCGSIDEALQVFETLP-KRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKA 365

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN+  +  ++ ACS+   V  G   +  ++K       +     ++D+  +    LE
Sbjct: 366 GVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG-HLE 424

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRC 258
            A ++   M  E + V W  ++  C
Sbjct: 425 EAEELIRNMPIEPDDVIWKALLGAC 449


>gi|222625907|gb|EEE60039.1| hypothetical protein OsJ_12814 [Oryza sativa Japonica Group]
          Length = 852

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 234/697 (33%), Positives = 396/697 (56%), Gaps = 7/697 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  ++KSC       LG+LVH       L+ +  + ++LI +Y+  G L +A ++
Sbjct: 144 PDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQV 203

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +RD V W+ M+  YV  G    A+ +F +M   G  PN    +  +   +   +
Sbjct: 204 FDGMA-ERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESD 262

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++   +K G  +S+V V   L+ M+ K    L+  +K+F  M   + V W  MI
Sbjct: 263 LFFGVQLHTLAVKYG-LESEVAVANTLVSMYAKCKC-LDDGWKLFGLMPRDDLVTWNGMI 320

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           + C Q G    A+ LF DM  SG  PD  TL  ++ A ++L  F  GK+LH + +R  + 
Sbjct: 321 SGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVH 380

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           +DV +  +LVD+Y KC    +V  ++ V+D     +V+  + +I+GYV +G   +EAVK+
Sbjct: 381 MDVFLVSALVDIYFKCR---AVRMAQSVYDSSKAIDVVIGSTMISGYVLNG-MSQEAVKM 436

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  +++  + PN    ASVL AC ++    + ++++++A+K        V ++L+ MYA+
Sbjct: 437 FRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAK 496

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR++ +   F  +  K+ V++N+M+ ++A+N   E+A  L  E+   GV  S  T +S+
Sbjct: 497 CGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSV 556

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           LS  +S+ AI  G++IH  +IK    ++    +ALI MY +C N+E A +VF+ M ++N 
Sbjct: 557 LSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE 616

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW S+I  +  +G    ++ +   M  +G K + +T++A++SAC+HAG + EG + FR 
Sbjct: 617 VSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRC 676

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M +E+ I  RMEH+ACMVDL  R+G L +A+E I  MP   D  +W   L ACRVH + E
Sbjct: 677 MTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVE 736

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           L + A++ + + DP +   ++L+SN+ A AG W+ V+ +R+ MK+  + K  G SW++ +
Sbjct: 737 LAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVN 796

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           N  H F   + SHP + +IY  L  + L+++E GY+P
Sbjct: 797 NTSHLFVAADKSHPDSEDIYMSLKSILLELREEGYIP 833



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 243/495 (49%), Gaps = 10/495 (2%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV--KGSVDLESAYKVFDK 242
           AV+R C +  ++++G  ++G  +  G   +D  +   L+ M+V  +   D  + +    +
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL--SGFLPDRFTLSGVVSACSELELFT 300
                 + W  +I   T  G  R A+  +L M    S  LPD  T   VV +C+ L    
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+ +H  A   GL  D+ VG +L+ MYA     G + D+R+VFD M + + + W  ++ 
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYAN---GGLLWDARQVFDGMAERDCVLWNVMMD 220

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GYV++G     AV+LF DM      PN  T A  L       D     Q++T AVK G  
Sbjct: 221 GYVKAGSV-SSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +  V N+L+SMYA+   ++D  K F  +   +LV++N M+    +N   ++A  L  ++
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           + +G+   + T  SLL   + +    +G+++H  I+++    +  + +AL+ +Y +C  V
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A  V+   +  +V+  ++MI+G+  +G +  A+++F  +L  GI+PN +   +VL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           +    +  G +   S   ++    R    + ++D+  + G L +   +I S   + D + 
Sbjct: 460 ASMAAMKLG-QELHSYALKNAYEGRCYVESALMDMYAKCGRL-DLSHYIFSKISAKDEVT 517

Query: 661 WRTFLGACRVHGDTE 675
           W + + +   +G+ E
Sbjct: 518 WNSMISSFAQNGEPE 532



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 256/501 (51%), Gaps = 12/501 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G V  A+     M   G  P+  T +  L       +   G  +H+L  +  LE  
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+L+S+Y+KC  L++  K+F  M  + D+V+W+ MIS  V  G    A+ +F +M 
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLM-PRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSV 231
           + G  P+     +++ A ++      G  ++G++++ C +   DV +  AL+D++ K   
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHM--DVFLVSALVDIYFKCRA 398

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +  A  V+D     + V  + MI+     G  ++A+++F  ++  G  P+   ++ V+ 
Sbjct: 399 -VRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLP 457

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ +     G++LHS+A++        V  +L+DMYAKC   G +D S  +F ++   +
Sbjct: 458 ACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC---GRLDLSHYIFSKISAKD 514

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++W ++I+ + Q+ G  +EA+ LF +M    V  ++ T +SVL AC +L      ++++
Sbjct: 515 EVTWNSMISSFAQN-GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIH 573

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K     D    ++LI MY + G +E A + FES+ EKN VS+N+++ +Y      +
Sbjct: 574 GVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVK 633

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNA 529
           ++  LL  +++ G      TF +L+S  +  G + +G ++  R +   ++    +  +  
Sbjct: 634 ESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLF-RCMTEEYQIAPRMEHFAC 692

Query: 530 LISMYSRCANVEAAFQVFKEM 550
           ++ +YSR   ++ A ++  +M
Sbjct: 693 MVDLYSRAGKLDKAMELIVDM 713



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 170/347 (48%), Gaps = 41/347 (11%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G  Q+A+     + ++G  P+    + +L +C       LG+ +HS   ++  E 
Sbjct: 424 YVLN-GMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEG 482

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              + ++L+ +Y+KCG L+ ++ IF  +  K D V+W+SMISS+   G+  +A+++F EM
Sbjct: 483 RCYVESALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMISSFAQNGEPEEALNLFREM 541

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G   +    S+V+ AC++   +  G  I+G ++K G   +D+    ALIDM+ K   
Sbjct: 542 CMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK-GPIRADLFAESALIDMYGKCG- 599

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +LE A++VF+ M EKN V W  +I      G  ++++ L   M   GF  D  T   +VS
Sbjct: 600 NLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVS 659

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+           H+  ++ GL L  C                 + +  ++  RM +H 
Sbjct: 660 ACA-----------HAGQVQEGLRLFRC-----------------MTEEYQIAPRM-EH- 689

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
              +  ++  Y ++G  DK A++L  DM      P+   + ++L AC
Sbjct: 690 ---FACMVDLYSRAGKLDK-AMELIVDM---PFKPDAGIWGALLHAC 729


>gi|357521295|ref|XP_003630936.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355524958|gb|AET05412.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 959

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 244/704 (34%), Positives = 400/704 (56%), Gaps = 7/704 (0%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  ++K+C    N  L K+VH L        +  I +SLI LY+  G +++A  +
Sbjct: 175 PDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIGSSLIKLYTDNGYIHDAKYL 234

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  +   RD + W+ M++ YV  G    A+  F EM      PN   F  ++  C+    
Sbjct: 235 FDEL-PVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGI 293

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           V  G  ++G +++ G F+SD  V   +I M+ K   +L  A K+FD M + +TV W  +I
Sbjct: 294 VRAGIQLHGLVIRSG-FESDPTVANTIITMYSKCG-NLFDARKIFDIMPQTDTVTWNGLI 351

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               Q G   +A+ LF  M+ SG   D  T +  + +  +       K++HS+ +R G+ 
Sbjct: 352 AGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHGVP 411

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            DV +  +LVD+Y K    G V+ + K F +    +V   TA+I+GYV +G  + EA+ L
Sbjct: 412 FDVYLKSALVDIYFK---GGDVEMACKTFQQNTLVDVAVCTAMISGYVLNG-LNVEALNL 467

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  +IQ  + PN  T ASVL AC  L    + ++++   +K+G      VG+S+  MYA+
Sbjct: 468 FRWLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAK 527

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
           SGR++ A + F  +  K+ V +N M+ ++++N   E A +L  ++  +G    + + ++ 
Sbjct: 528 SGRLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSAT 587

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           LS  ++  A+  G+++H  ++++ F S+  + + LI MYS+C  +  A  VF  M+ +N 
Sbjct: 588 LSACANYPALYYGKELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNE 647

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW S+I  +  HG     L++F++M+  GI+P+ +T++ ++SAC HAGL+ EG  +FR 
Sbjct: 648 VSWNSIIAAYGNHGRPRECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRC 707

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M +E+GI  RMEH+ACMVDL GR+G L EA + I+SMP + D   W + LGACR+HG+ E
Sbjct: 708 MTEEYGICARMEHFACMVDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVE 767

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           L K A++ ++E DP +   ++LLSN++A AG WE V  +R  MKE+ + K  G SWI+ +
Sbjct: 768 LAKLASKHLVELDPNNSGYYVLLSNVHAGAGEWESVLKVRSLMKEKGVQKIPGYSWIDVN 827

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
              H F   +  HP+++EIY  L  L L++++ GY+P     LH
Sbjct: 828 GGTHMFSAADGCHPQSVEIYLILKNLLLELRKHGYVPQPYLPLH 871



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 138/554 (24%), Positives = 267/554 (48%), Gaps = 9/554 (1%)

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
           ++ +Y  C    +   +F  +     +  W+ +I  +   G    A+  F  ML     P
Sbjct: 117 MLGMYVLCRSFKDVGNLFCRLQLCYSL-PWNWLIRGFSMLGCFDFALMFFFRMLGSNVAP 175

Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
           ++Y F  VI+AC    NV +  +++      G F  D+ +G +LI ++       ++ Y 
Sbjct: 176 DKYTFPYVIKACGGLNNVPLCKMVHELARSMG-FHMDLFIGSSLIKLYTDNGYIHDAKY- 233

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FD++  ++ + W +M+    + G    A+  F +M  S   P+  +   ++S C+   +
Sbjct: 234 LFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGI 293

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
             +G QLH   IR+G   D  V  +++ MY+KC   G++ D+RK+FD M   + ++W  +
Sbjct: 294 VRAGIQLHGLVIRSGFESDPTVANTIITMYSKC---GNLFDARKIFDIMPQTDTVTWNGL 350

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           I GYVQ+G  D EAV LF  M+   V  +  TFAS L +          ++V+++ V+ G
Sbjct: 351 IAGYVQNGFTD-EAVALFKAMVTSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHG 409

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  + ++L+ +Y + G +E A K F+     ++     M+  Y  N  + +A  L  
Sbjct: 410 VPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFR 469

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
            +   G+  +  T AS+L   +++ ++  G+++H  I+K G E+   + +++  MY++  
Sbjct: 470 WLIQEGMVPNCLTMASVLPACAALASLKLGKELHCDILKKGLENVCQVGSSITYMYAKSG 529

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            ++ A+Q F+ M  ++ + W  MI  F+++G    A+++F +M   G K + ++  A LS
Sbjct: 530 RLDLAYQFFRRMPVKDSVCWNLMIVSFSQNGKPELAIDLFRQMGTSGTKFDSVSLSATLS 589

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           AC++   +  G K        +  +      + ++D+  + G L  A      M    +V
Sbjct: 590 ACANYPALYYG-KELHCFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEV 648

Query: 659 LVWRTFLGACRVHG 672
             W + + A   HG
Sbjct: 649 -SWNSIIAAYGNHG 661



 Score =  203 bits (516), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 157/584 (26%), Positives = 283/584 (48%), Gaps = 20/584 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++ +G    A+ T   M      P+  ++  LL  C        G  +H L+ RS  E +
Sbjct: 253 YVKNGDFNSALGTFQEMRNSCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESD 312

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N++I++YSKCG+L +A KIF  M  + D V+W+ +I+ YV  G   +A+ +F  M+
Sbjct: 313 PTVANTIITMYSKCGNLFDARKIFDIM-PQTDTVTWNGLIAGYVQNGFTDEAVALFKAMV 371

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   +   F++ + +   + ++     ++ ++++ G    DV +  AL+D++ KG  D
Sbjct: 372 TSGVKLDSITFASFLPSVLKSGSLKYCKEVHSYIVRHG-VPFDVYLKSALVDIYFKGG-D 429

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A K F + T  +    T MI+     G   +A+ LF  +I  G +P+  T++ V+ A
Sbjct: 430 VEMACKTFQQNTLVDVAVCTAMISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPA 489

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           C+ L     GK+LH   ++ GL  +VC VG S+  MYAK    G +D + + F RM   +
Sbjct: 490 CAALASLKLGKELHCDILKKGLE-NVCQVGSSITYMYAK---SGRLDLAYQFFRRMPVKD 545

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            + W  +I  + Q+ G+ + A+ LF  M       +  + ++ L AC N       ++++
Sbjct: 546 SVCWNLMIVSFSQN-GKPELAIDLFRQMGTSGTKFDSVSLSATLSACANYPALYYGKELH 604

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              V+     D  V ++LI MY++ G++  AR  F+ +  KN VS+N+++ AY  +    
Sbjct: 605 CFVVRNSFISDTFVASTLIDMYSKCGKLALARSVFDMMDWKNEVSWNSIIAAYGNHGRPR 664

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNAL 530
           +  +L HE+ + G+     TF  ++S     G + +G         + G  +    +  +
Sbjct: 665 ECLDLFHEMVEAGIQPDHVTFLVIMSACGHAGLVDEGIYYFRCMTEEYGICARMEHFACM 724

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           + +Y R   +  AF   K M    +  +W S++     HG    A ++  K L + + PN
Sbjct: 725 VDLYGRAGRLHEAFDTIKSMPFTPDAGTWGSLLGACRLHGNVELA-KLASKHLVE-LDPN 782

Query: 590 GITYIAVLSACSHAGLISEGWK---HFRSMYDEHGIVQRMEHYA 630
              Y  +LS   HAG  +  W+     RS+  E G VQ++  Y+
Sbjct: 783 NSGYYVLLSNV-HAG--AGEWESVLKVRSLMKEKG-VQKIPGYS 822



 Score =  194 bits (494), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/476 (25%), Positives = 237/476 (49%), Gaps = 8/476 (1%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           I+  +L CG  +  + +G  ++ M+V      +    +F ++    ++ W  +I   + L
Sbjct: 98  IHAKVLVCG-MNGSLTLGSRMLGMYVLCR-SFKDVGNLFCRLQLCYSLPWNWLIRGFSML 155

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           GC   A+  F  M+ S   PD++T   V+ AC  L      K +H  A   G  +D+ +G
Sbjct: 156 GCFDFALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMDLFIG 215

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SL+ +Y   T +G + D++ +FD +   + + W  ++ GYV++G  +  A+  F +M  
Sbjct: 216 SSLIKLY---TDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFN-SALGTFQEMRN 271

Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
             V PN  +F  +L  C          Q++   ++ G   D  V N++I+MY++ G + D
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFD 331

Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           ARK F+ + + + V++N ++  Y +N  +++A  L   +  +GV   + TFAS L     
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
            G++   +++H+ I++ G   +  + +AL+ +Y +  +VE A + F++    +V   T+M
Sbjct: 392 SGSLKYCKEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMACKTFQQNTLVDVAVCTAM 451

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I+G+  +G    AL +F  ++ +G+ PN +T  +VL AC+    +  G K       + G
Sbjct: 452 ISGYVLNGLNVEALNLFRWLIQEGMVPNCLTMASVLPACAALASLKLG-KELHCDILKKG 510

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
           +    +  + +  +  +SG L  A +F R MP+  D + W   + +   +G  EL 
Sbjct: 511 LENVCQVGSSITYMYAKSGRLDLAYQFFRRMPVK-DSVCWNLMIVSFSQNGKPELA 565



 Score =  171 bits (432), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/343 (28%), Positives = 180/343 (52%), Gaps = 5/343 (1%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+  +  G+   + +G  ++ MY  C    S  D   +F R+     + W  +I G+
Sbjct: 96  RQIHAKVLVCGMNGSLTLGSRMLGMYVLCR---SFKDVGNLFCRLQLCYSLPWNWLIRGF 152

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
              G  D  A+  F  M+   VAP+ +TF  V+KACG L +  + + V+  A   G  +D
Sbjct: 153 SMLGCFD-FALMFFFRMLGSNVAPDKYTFPYVIKACGGLNNVPLCKMVHELARSMGFHMD 211

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             +G+SLI +Y  +G + DA+  F+ L  ++ + +N M++ Y KN +   A     E+ +
Sbjct: 212 LFIGSSLIKLYTDNGYIHDAKYLFDELPVRDCILWNVMLNGYVKNGDFNSALGTFQEMRN 271

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           + V  ++ +F  LLS  ++ G +  G Q+H  +I+SGFES+  + N +I+MYS+C N+  
Sbjct: 272 SCVKPNSVSFVCLLSVCATRGIVRAGIQLHGLVIRSGFESDPTVANTIITMYSKCGNLFD 331

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A ++F  M   + ++W  +I G+ ++GF   A+ +F  M+  G+K + IT+ + L +   
Sbjct: 332 ARKIFDIMPQTDTVTWNGLIAGYVQNGFTDEAVALFKAMVTSGVKLDSITFASFLPSVLK 391

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           +G +    K   S    HG+   +   + +VD+  + G +  A
Sbjct: 392 SGSLKYC-KEVHSYIVRHGVPFDVYLKSALVDIYFKGGDVEMA 433


>gi|326488203|dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 637

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/576 (36%), Positives = 336/576 (58%), Gaps = 5/576 (0%)

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + ++ +C       +G+QLH   + +GL  D  +   LVD+YA C   G V  +R++FD 
Sbjct: 66  TSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAAC---GQVGHARRLFDG 122

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   NV  W  +I  Y + G R+  AV+L+  M++  V P++FT+  VLKAC  LLD   
Sbjct: 123 MPKRNVFLWNVLIRAYAREGPREA-AVRLYRGMVEHGVEPDNFTYPLVLKACAALLDLET 181

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             +V+          D  V   ++ MYA+ G ++DAR  F+ +  ++ V +N+M+ AY +
Sbjct: 182 GREVHQRVSGTRWGQDVFVCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQ 241

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N    +A  L  ++   G+G +  T  S +S A+   A+ +G ++H    + GF     +
Sbjct: 242 NGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQDKL 301

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG- 585
             +L+ MY++   V+ A  +F+++  R ++SW +MI G+  HG A  AL +F KM  D  
Sbjct: 302 KTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQ 361

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           + P+ IT++ VLSAC+H G++ E  + F  M + + I   ++HY C++D+LG +G   EA
Sbjct: 362 VTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEA 421

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
            + I+ M +  D  +W   L  C++H + ELG+ A + ++E +P+D   ++ LSN+YA +
Sbjct: 422 YDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVHLSNIYAQS 481

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G WE  A +RK M  R L K   CSWIE   K H F VG+ SHP++ EIY EL++L   +
Sbjct: 482 GKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGELERLEGLM 541

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
            + GY+PD   V H +++++K   +  HSE++A+AFGLIST     + V KNLRVC DCH
Sbjct: 542 SDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKNLRVCEDCH 601

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             IK IS +  REI++RD NR+HH  +G+CSC DYW
Sbjct: 602 VVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  170 bits (430), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 148/571 (25%), Positives = 251/571 (43%), Gaps = 101/571 (17%)

Query: 12  IPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQ 71
           +PP + F  S P     PPS++P   + P           YH                  
Sbjct: 36  LPPNTGFAASPP-----PPSTNPRLASSPHA---------YH------------------ 63

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
                    ++ +L+SC+ S +   G+ +H  L  S L P++V+   L+ LY+ CG +  
Sbjct: 64  --------HHTSILQSCVASGSLRAGRQLHGRLLVSGLGPDTVLSTKLVDLYAACGQVGH 115

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           A ++F  M  KR++  W+ +I +Y   G +  A+ ++  M+E G  P+ + +  V++AC+
Sbjct: 116 ARRLFDGM-PKRNVFLWNVLIRAYAREGPREAAVRLYRGMVEHGVEPDNFTYPLVLKACA 174

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVG 250
              ++  G  ++   +    +  DV V   ++DM+ K G VD   A  VFD +  ++ V 
Sbjct: 175 ALLDLETGREVHQ-RVSGTRWGQDVFVCAGVVDMYAKCGCVD--DARAVFDGIAVRDAVV 231

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           W  MI    Q G P +A+ L  DM  +G  P   TL   VSA ++      G++LH +  
Sbjct: 232 WNSMIAAYGQNGRPMEALALCRDMAANGIGPTIATLVSAVSAAADAAALPRGRELHGFGW 291

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDK 370
           R G  L   +  SLVDMYAK    G V  +R +F++++   ++SW A+I GY   G  D 
Sbjct: 292 RRGFGLQDKLKTSLVDMYAK---SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHAD- 347

Query: 371 EAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           EA+ LF+ M    QV P++ TF  VL AC +                             
Sbjct: 348 EALALFNKMKGDAQVTPDNITFVGVLSACNH----------------------------- 378

Query: 430 ISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
                  G +E+A++ F  +      +  +  Y  ++D        E+A++L   I+   
Sbjct: 379 ------GGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLGHTGRFEEAYDL---IKGMS 429

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           +   +  + +LL+G      +  GE    ++I+   E +   Y  L ++Y++    E A 
Sbjct: 430 IEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPE-DAGNYVHLSNIYAQSGKWEKAA 488

Query: 545 QVFKEMEDRNV-----ISWTSMITGFAKHGF 570
           +V K M +R +      SW  +      HGF
Sbjct: 489 RVRKLMTNRGLKKILACSWIELKG--KTHGF 517


>gi|222626149|gb|EEE60281.1| hypothetical protein OsJ_13335 [Oryza sativa Japonica Group]
          Length = 1135

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 261/765 (34%), Positives = 426/765 (55%), Gaps = 35/765 (4%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P+ V+    ++   K G L +A  +F  M  ++++V+W+S++S Y   G+   A+ MF +
Sbjct: 46  PDVVLECKRLNRLVKSGRLADALDLFDRM-PRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M+E G  PN++  +A + AC++   +  G  ++   ++ G F  D  +G  LI+M+ + G
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAG-FAGDAWIGSCLIEMYSRCG 163

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  L +A +VFD+M   + VG+T +I+   + G    A    + M+  G  P+  T++ +
Sbjct: 164 S--LPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221

Query: 290 VSACSELELFTSGKQLHSWAIRT-GL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           ++AC  +     G+Q+H + I+  GL +  V    +L+D Y++   +G    ++ VFD +
Sbjct: 222 LTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR---NGEFKLAKAVFDSL 274

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              NV+SW +++  Y++ G R +EA+++F DMI   V PN F  + VL ACG++    + 
Sbjct: 275 HCKNVVSWCSMMQLYIRDG-RLEEALQVFGDMISEGVDPNEFALSIVLGACGSI---GLG 330

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            Q++  A+K     D  V N+L+SMY R+G +E+       +   +LVS+ T + A  +N
Sbjct: 331 RQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQN 390

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              EKA  LL ++   G   + Y F+S+LS  + + ++ +G Q H   +K G +S  C  
Sbjct: 391 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 450

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           NALI+MYS+C  + +A   F  M   +V SW S+I G A+HG A +ALE+F KM ++GIK
Sbjct: 451 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIK 510

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+  T++ VL  C+H+G++ EG   FR M D++       HYACM+D+LGR+G   EAL 
Sbjct: 511 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 570

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I  MP   D L+W+T L +C++H + ++GK AA+ ++E   +D A+++L+SN+YA  G 
Sbjct: 571 MINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGE 630

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           WE    +R+RM E  + K+AGCSWIE +N+VH F   + SHP +  IY  L +L   +++
Sbjct: 631 WEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690

Query: 768 FGYL-PDTNFVLHELEEEQKVQYLFQH--SEKIAVAFGLIS-------TSKSKPIRVFKN 817
           F  L P    V HE  E  K  YL ++   +  AV + + S       T  S+   + K 
Sbjct: 691 FDELEPFDIEVRHEGNEVLK-GYLAKYDLDKNFAVVYTMESLDVHIVLTENSRDRYINKK 749

Query: 818 LRVCG-DCHTAIKYIS-MVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           L   G D H  +   S MV G     RDSNR    K+ +    D+
Sbjct: 750 LVAVGRDKHGVLMAKSVMVAG----CRDSNRSEDSKEIRLISEDW 790



 Score =  226 bits (575), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 273/535 (51%), Gaps = 21/535 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR + A+     M + G  P+    +  L +C        G+ VHSL  R+    +
Sbjct: 89  YTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGD 148

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I + LI +YS+CG L  A ++F  M +  D+V ++S+IS++   G+   A    ++ML
Sbjct: 149 AWIGSCLIEMYSRCGSLPAAKEVFDRM-DSPDVVGYTSLISAFCRNGEFELAAEALIQML 207

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-KCGYFDSDVCVGCALIDMFVKGSV 231
           + G  PNE+  + ++ AC       +G  I+G+L+ K G     V    ALID + +   
Sbjct: 208 KQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNG- 262

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           + + A  VFD +  KN V W  M+    + G   +A+++F DMI  G  P+ F LS V+ 
Sbjct: 263 EFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLG 322

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC  + L   G+QLH  AI+  L  D+ V  +L+ MY +    G V++   + +++ + +
Sbjct: 323 ACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGRT---GLVEELEAMLNKIENPD 376

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SWT  I+   Q+G  +K A+ L   M      PN + F+SVL +C ++   +   Q +
Sbjct: 377 LVSWTTAISANFQNGFGEK-AIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFH 435

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             A+K G   + C GN+LI+MY++ G+M  AR AF+ +   ++ S+N+++  +A++ ++ 
Sbjct: 436 CLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDAN 495

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNAL 530
           KA E+  ++   G+     TF  +L G +  G + +GE     +I +  F      Y  +
Sbjct: 496 KALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACM 555

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
           I M  R    + A ++  +M  + + + W +++     H    R L+I  K+ AD
Sbjct: 556 IDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH----RNLDI-GKLAAD 605


>gi|115459414|ref|NP_001053307.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|32482936|emb|CAE02340.1| OSJNBb0072M01.1 [Oryza sativa Japonica Group]
 gi|38345689|emb|CAD41109.2| OSJNBb0070J16.5 [Oryza sativa Japonica Group]
 gi|113564878|dbj|BAF15221.1| Os04g0514500 [Oryza sativa Japonica Group]
 gi|215768472|dbj|BAH00701.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|218195211|gb|EEC77638.1| hypothetical protein OsI_16630 [Oryza sativa Indica Group]
          Length = 1027

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/732 (34%), Positives = 405/732 (55%), Gaps = 11/732 (1%)

Query: 40   PTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
            PT S    N +I  H   G     +     M   G  P   T++ +L +    + F  G+
Sbjct: 286  PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQ 345

Query: 99   LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
             +H+      L+ N  + +SLI+LY+KCG  ++A  +F  +  +++IV W++M++ +V  
Sbjct: 346  QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQN 404

Query: 159  GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
                +AI MF  M+      +E+ F +++ AC+   +  +G  ++   +K    D  + V
Sbjct: 405  ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFV 463

Query: 219  GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
              A +DM+ K    +  A  +F  +  K+++ W  +     Q     +A+ +   M L G
Sbjct: 464  ANATLDMYSKYGA-IGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG 522

Query: 279  FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
              PD  + S  ++ACS +    +GKQ+H  AI+ G+  +  VG SL+D+Y+K    G V+
Sbjct: 523  ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK---HGDVE 579

Query: 339  DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             SRK+F ++   +++   A+I G+VQ+   D EA++LF  +++  + P+  TF+S+L  C
Sbjct: 580  SSRKIFAQVDASSIVPINALIAGFVQNNNED-EAIQLFQQVLKDGLKPSSVTFSSILSGC 638

Query: 399  GNLLDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFE-KNLVS 456
               L+S + +QV+ + +K G   DD + G SL  +Y +S  +EDA K    + + KNL  
Sbjct: 639  SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698

Query: 457  YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
            +  ++  YA+N   + +      +    V +   TFAS+L   S + A   G++IH  I 
Sbjct: 699  WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758

Query: 517  KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARAL 575
            KSGF S     +ALI MYS+C +V ++F+ FKE++++ +++ W SMI GFAK+G+A  AL
Sbjct: 759  KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 818

Query: 576  EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
             +F KM    IKP+ +T++ VL AC+H+GLISEG   F SM   +G+  R++HYAC +DL
Sbjct: 819  LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDL 878

Query: 636  LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
            LGR G L EA E I  +P   D +VW T+L ACR+H D E GK AA  ++E +PQ  + +
Sbjct: 879  LGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 938

Query: 696  ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
            +LLS+L+A+ G+W      R+ M+E+ + K  GCSWI   NK   F V +  HP  L IY
Sbjct: 939  VLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIY 998

Query: 756  AELDQLALKIKE 767
              L  L   +K+
Sbjct: 999  EMLGDLTGMMKK 1010



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 276/529 (52%), Gaps = 42/529 (7%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD    +++L +C R      G+ VH  + +S    +     +L+ +Y+KCGD+  A
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 212

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F  +    D + WSSMI+ Y   G   +A+ +F  M ++G  P++     +I   ++
Sbjct: 213 RRVFDGIACP-DTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS 271

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
           +                                       L+ A  +  KM   +TV W 
Sbjct: 272 SGR-------------------------------------LDHATALLKKMPTPSTVAWN 294

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I+   Q G   + + L+ DM   G  P R T + ++SA + ++ F  G+Q+H+ A+  
Sbjct: 295 AVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH 354

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           GL  +V VG SL+++YAKC   G   D++ VFD   + N++ W A++TG+VQ+    +EA
Sbjct: 355 GLDANVFVGSSLINLYAKC---GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQN-ELPEEA 410

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +++F  M++  +  + FTF S+L AC  L    + +QV+   +K    +   V N+ + M
Sbjct: 411 IRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDM 470

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++ G + DA+  F  +  K+ +S+N +    A+NL  E+A  +L  +   G+     +F
Sbjct: 471 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           ++ ++  S+I A   G+QIH   IK G  SNH + ++LI +YS+  +VE++ ++F +++ 
Sbjct: 531 STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA 590

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            +++   ++I GF ++     A+++F ++L DG+KP+ +T+ ++LS CS
Sbjct: 591 SSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 280/603 (46%), Gaps = 58/603 (9%)

Query: 73  GNHPDLDTYSLLL--------------KSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           G+HPD  +Y+ LL               S  R+R+    + +H  + R        + +S
Sbjct: 37  GSHPDASSYASLLSSLSRECHARHPFDASPPRARHSQTCRALHGRILRGGSPLLGRLGDS 96

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGFC 177
           L+ LY K G +  A       G +R   + SS++S +   G   D +  F  +    G  
Sbjct: 97  LVELYCKSGRVGYAWSALGYAG-ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+++  + V+ ACS    +A G  ++  ++K G F S V    AL+DM+ K   D+ +A 
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG-FSSSVFCEAALVDMYAKCG-DVPNAR 213

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +VFD +   +T+ W+ MI    ++GC ++A+ LF  M   G  PD+ TL  ++S      
Sbjct: 214 RVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIST----- 268

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           L +SG+                                 +D +  +  +M   + ++W A
Sbjct: 269 LASSGR---------------------------------LDHATALLKKMPTPSTVAWNA 295

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +I+G+ QS G +   + L+ DM    + P   TFAS+L A  N+      +Q++  AV  
Sbjct: 296 VISGHAQS-GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH 354

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G   +  VG+SLI++YA+ G   DA+  F+   EKN+V +N M+  + +N   E+A  + 
Sbjct: 355 GLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMF 414

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
             +    + T  +TF S+L   + + +   G+Q+H   IK+  + +  + NA + MYS+ 
Sbjct: 415 QYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKY 474

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             +  A  +F  +  ++ ISW ++  G A++     A+ +  +M   GI P+ +++   +
Sbjct: 475 GAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAI 534

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           +ACS+      G K    +  ++GI       + ++DL  + G +  + +    +  S+ 
Sbjct: 535 NACSNIRATETG-KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSI 593

Query: 658 VLV 660
           V +
Sbjct: 594 VPI 596



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 154/365 (42%), Gaps = 44/365 (12%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           + LH   +R G  L   +G SLV++Y K    G V  +        +    + +++++ +
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCK---SGRVGYAWSALGYAGERASGAASSLLSCH 132

Query: 363 VQSG--GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            +SG  G    A +       G+  P+ F  A VL AC  +       QV+   VK G +
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGR--PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFS 190

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  +L+ MYA+ G + +AR+ F+ +   + + +++M+  Y +    ++A  L   +
Sbjct: 191 SSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM 250

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  G      T  +++S  +S G                                    +
Sbjct: 251 DKMGSAPDQVTLVTIISTLASSG-----------------------------------RL 275

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  + K+M   + ++W ++I+G A+ G     L ++  M + G+ P   T+ ++LSA 
Sbjct: 276 DHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAA 335

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++     EG +   +    HG+   +   + +++L  + G  ++A + +  +    ++++
Sbjct: 336 ANMKAFVEG-QQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDA-KNVFDLSCEKNIVM 393

Query: 661 WRTFL 665
           W   L
Sbjct: 394 WNAML 398


>gi|222629201|gb|EEE61333.1| hypothetical protein OsJ_15451 [Oryza sativa Japonica Group]
          Length = 1037

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 249/732 (34%), Positives = 405/732 (55%), Gaps = 11/732 (1%)

Query: 40   PTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
            PT S    N +I  H   G     +     M   G  P   T++ +L +    + F  G+
Sbjct: 296  PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQ 355

Query: 99   LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
             +H+      L+ N  + +SLI+LY+KCG  ++A  +F  +  +++IV W++M++ +V  
Sbjct: 356  QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQN 414

Query: 159  GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
                +AI MF  M+      +E+ F +++ AC+   +  +G  ++   +K    D  + V
Sbjct: 415  ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFV 473

Query: 219  GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
              A +DM+ K    +  A  +F  +  K+++ W  +     Q     +A+ +   M L G
Sbjct: 474  ANATLDMYSKYGA-IGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG 532

Query: 279  FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
              PD  + S  ++ACS +    +GKQ+H  AI+ G+  +  VG SL+D+Y+K    G V+
Sbjct: 533  ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK---HGDVE 589

Query: 339  DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             SRK+F ++   +++   A+I G+VQ+   D EA++LF  +++  + P+  TF+S+L  C
Sbjct: 590  SSRKIFAQVDASSIVPINALIAGFVQNNNED-EAIQLFQQVLKDGLKPSSVTFSSILSGC 648

Query: 399  GNLLDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFE-KNLVS 456
               L+S + +QV+ + +K G   DD + G SL  +Y +S  +EDA K    + + KNL  
Sbjct: 649  SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 708

Query: 457  YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
            +  ++  YA+N   + +      +    V +   TFAS+L   S + A   G++IH  I 
Sbjct: 709  WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 768

Query: 517  KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARAL 575
            KSGF S     +ALI MYS+C +V ++F+ FKE++++ +++ W SMI GFAK+G+A  AL
Sbjct: 769  KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 828

Query: 576  EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
             +F KM    IKP+ +T++ VL AC+H+GLISEG   F SM   +G+  R++HYAC +DL
Sbjct: 829  LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGSMRKVYGLTPRLDHYACFIDL 888

Query: 636  LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
            LGR G L EA E I  +P   D +VW T+L ACR+H D E GK AA  ++E +PQ  + +
Sbjct: 889  LGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 948

Query: 696  ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
            +LLS+L+A+ G+W      R+ M+E+ + K  GCSWI   NK   F V +  HP  L IY
Sbjct: 949  VLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIY 1008

Query: 756  AELDQLALKIKE 767
              L  L   +K+
Sbjct: 1009 EMLGDLTGMMKK 1020



 Score =  257 bits (657), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 276/529 (52%), Gaps = 42/529 (7%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD    +++L +C R      G+ VH  + +S    +     +L+ +Y+KCGD+  A
Sbjct: 163 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 222

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F  +    D + WSSMI+ Y   G   +A+ +F  M ++G  P++     +I   ++
Sbjct: 223 RRVFDGIACP-DTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS 281

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
           +                                       L+ A  +  KM   +TV W 
Sbjct: 282 SGR-------------------------------------LDHATALLKKMPTPSTVAWN 304

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I+   Q G   + + L+ DM   G  P R T + ++SA + ++ F  G+Q+H+ A+  
Sbjct: 305 AVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH 364

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           GL  +V VG SL+++YAKC   G   D++ VFD   + N++ W A++TG+VQ+    +EA
Sbjct: 365 GLDANVFVGSSLINLYAKC---GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQN-ELPEEA 420

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +++F  M++  +  + FTF S+L AC  L    + +QV+   +K    +   V N+ + M
Sbjct: 421 IRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDM 480

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++ G + DA+  F  +  K+ +S+N +    A+NL  E+A  +L  +   G+     +F
Sbjct: 481 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 540

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           ++ ++  S+I A   G+QIH   IK G  SNH + ++LI +YS+  +VE++ ++F +++ 
Sbjct: 541 STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA 600

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            +++   ++I GF ++     A+++F ++L DG+KP+ +T+ ++LS CS
Sbjct: 601 SSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 649



 Score =  189 bits (479), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 167/675 (24%), Positives = 300/675 (44%), Gaps = 84/675 (12%)

Query: 1   MMTLSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQ 60
           M+ L  P     PPP+S      SR N  P+S    +  P    P               
Sbjct: 1   MLALPRPWHTCAPPPAS-----RSRPNREPTSLLLLLLLPFRLAP--------------- 40

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLL--------------KSCIRSRNFHLGKLVHSLLTR 106
            A+  L      G+HPD  +Y+ LL               S  R+R+    + +H  + R
Sbjct: 41  AAVAAL------GSHPDASSYASLLSSLSRECHARHPFDASPPRARHSQTCRALHGRILR 94

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
                   + +SL+ LY K G +  A       G +    + SS++S +   G   D + 
Sbjct: 95  GGSPLLGRLGDSLVELYCKSGRVGYAWSALGYAGERASGAA-SSLLSCHARSGSPGDVLG 153

Query: 167 MFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            F  +    G  P+++  + V+ ACS    +A G  ++  ++K G F S V    AL+DM
Sbjct: 154 AFRYIRCTAGGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG-FSSSVFCEAALVDM 212

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           + K   D+ +A +VFD +   +T+ W+ MI    ++GC ++A+ LF  M   G  PD+ T
Sbjct: 213 YAKCG-DVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVT 271

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L  ++S      L +SG+                                 +D +  +  
Sbjct: 272 LVTIIST-----LASSGR---------------------------------LDHATALLK 293

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           +M   + ++W A+I+G+ QS G +   + L+ DM    + P   TFAS+L A  N+    
Sbjct: 294 KMPTPSTVAWNAVISGHAQS-GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFV 352

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             +Q++  AV  G   +  VG+SLI++YA+ G   DA+  F+   EKN+V +N M+  + 
Sbjct: 353 EGQQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFV 412

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
           +N   E+A  +   +    + T  +TF S+L   + + +   G+Q+H   IK+  + +  
Sbjct: 413 QNELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLF 472

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           + NA + MYS+   +  A  +F  +  ++ ISW ++  G A++     A+ +  +M   G
Sbjct: 473 VANATLDMYSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG 532

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           I P+ +++   ++ACS+      G K    +  ++GI       + ++DL  + G +  +
Sbjct: 533 ITPDDVSFSTAINACSNIRATETG-KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESS 591

Query: 646 LEFIRSMPLSADVLV 660
            +    +  S+ V +
Sbjct: 592 RKIFAQVDASSIVPI 606



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 154/365 (42%), Gaps = 44/365 (12%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           + LH   +R G  L   +G SLV++Y K    G V  +        +    + +++++ +
Sbjct: 86  RALHGRILRGGSPLLGRLGDSLVELYCK---SGRVGYAWSALGYAGERASGAASSLLSCH 142

Query: 363 VQSG--GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            +SG  G    A +       G+  P+ F  A VL AC  +       QV+   VK G +
Sbjct: 143 ARSGSPGDVLGAFRYIRCTAGGR--PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFS 200

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  +L+ MYA+ G + +AR+ F+ +   + + +++M+  Y +    ++A  L   +
Sbjct: 201 SSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM 260

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  G      T  +++S  +S G                                    +
Sbjct: 261 DKMGSAPDQVTLVTIISTLASSG-----------------------------------RL 285

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  + K+M   + ++W ++I+G A+ G     L ++  M + G+ P   T+ ++LSA 
Sbjct: 286 DHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAA 345

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++     EG +   +    HG+   +   + +++L  + G  ++A + +  +    ++++
Sbjct: 346 ANMKAFVEG-QQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDA-KNVFDLSCEKNIVM 403

Query: 661 WRTFL 665
           W   L
Sbjct: 404 WNAML 408


>gi|347954524|gb|AEP33762.1| organelle transcript processing 82, partial [Hesperis matronalis]
          Length = 672

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 237/650 (36%), Positives = 380/650 (58%), Gaps = 39/650 (6%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L  A  VF+ + E N + W +M         P  A++L++ MI  G LP+ FT   ++ +
Sbjct: 25  LPYAISVFETIPEPNQLIWNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLKS 84

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C++ + F  G+Q+H   ++ G  LD+ V  SL+ MYA+   +G ++D++KVFDR    +V
Sbjct: 85  CAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQ---NGRLEDAQKVFDRSSHRDV 141

Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
           +S+TA+ITGY   G                              G  K+A++LF +M++ 
Sbjct: 142 VSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKT 201

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            V P+  T A+V+ AC       +  QV++     G   +  + N+LI +Y++ G +E A
Sbjct: 202 NVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKCGEVETA 261

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
            +  E L  K+++S+NT++  Y      ++A  L  E+  +G   +  T  S+L   + +
Sbjct: 262 CELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 321

Query: 503 GAIGKGEQIHARI---IKSGFESN-HCIYNALISMYSRCANVEAAFQVFKEME-DRNVIS 557
           GAI  G  IH  I   +K    +N   +  +LI MY++C +++AA QV      +R++ +
Sbjct: 322 GAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRSLST 381

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W +MI GFA HG A  A +IF +M  +GI+P+ IT++ +LSACSH+G++  G   FRSM 
Sbjct: 382 WNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIFRSMR 441

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
            ++ I  ++EHY CM+DLLG SG   EA E I +MP+  D ++W + L AC++HG+ ELG
Sbjct: 442 QDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVIWCSLLKACKIHGNLELG 501

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA-GCSWIEADN 736
           +  A+ +++ +P++P +++LLSN+YA+AG W  V  IR  + ++ + K+  GCS IE D+
Sbjct: 502 ESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXKIRTLLNDKGMKKKVPGCSSIEIDS 561

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
            VH+F +G+  HP+  EIY  L+++ + ++E G++PDT+ VL E+EEE K   L  HSEK
Sbjct: 562 VVHEFIIGDKLHPQNREIYGMLEEMEVLLEEAGFVPDTSEVLQEMEEEWKEGALRHHSEK 621

Query: 797 IAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNR 846
           +A+AFGLIST     + + KNLRVC +CH A K IS +  REI+ RD  R
Sbjct: 622 LAIAFGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTR 671



 Score =  178 bits (451), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 137/537 (25%), Positives = 258/537 (48%), Gaps = 49/537 (9%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L  A  +F+++     ++ W+ M   +      V A+ ++V M+ LG  PN + F  +++
Sbjct: 25  LPYAISVFETIPEPNQLI-WNIMFRGHALSSDPVSALKLYVVMISLGLLPNFFTFPFLLK 83

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVD--------------- 232
           +C+ ++    G  I+G +LK G FD D+ V  +LI M+ + G ++               
Sbjct: 84  SCAKSKTFKEGQQIHGHVLKLG-FDLDLYVHTSLISMYAQNGRLEDAQKVFDRSSHRDVV 142

Query: 233 --------------LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
                         +ESA K+FD++  K+ V W  MI+   + G  + A+ LF +M+ + 
Sbjct: 143 SYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAETGNYKKALELFKEMMKTN 202

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             PD  T++ VVSAC++      G+Q+HSW    G   ++ +  +L+D+Y+KC   G V+
Sbjct: 203 VKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIVNALIDLYSKC---GEVE 259

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            + ++ + + + +V+SW  +I GY       KEA+ LF +M++    PN  T  S+L AC
Sbjct: 260 TACELLEGLSNKDVISWNTLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPAC 318

Query: 399 GNLLDSNVAEQVYTHAVKRGRAL----DDCVGNSLISMYARSGRMEDARKAFE-SLFEKN 453
            +L   ++   ++ +  K+ + +       +  SLI MYA+ G ++ A +  + S F ++
Sbjct: 319 AHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCGDIDAAPQVSDSSAFNRS 378

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           L ++N M+  +A +  +  AF++   +   G+     TF  LLS  S  G +  G  I  
Sbjct: 379 LSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSACSHSGMLDLGRNIF- 437

Query: 514 RIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHG 569
           R ++  +     +  Y  +I +       + A ++     ME   VI W S++     HG
Sbjct: 438 RSMRQDYNITPKLEHYGCMIDLLGHSGLFKEAEEMINTMPMEPDGVI-WCSLLKACKIHG 496

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
                 E F K L      N  +Y+ + +  + AG  +E  K  R++ ++ G+ +++
Sbjct: 497 NLELG-ESFAKKLIKIEPENPGSYVLLSNIYATAGKWNEVXK-IRTLLNDKGMKKKV 551



 Score =  157 bits (398), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/366 (26%), Positives = 185/366 (50%), Gaps = 41/366 (11%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +M   G  P+  T+  LLKSC +S+ F  G+ +H  + +   + +  +  SLIS+Y++ G
Sbjct: 65  VMISLGLLPNFFTFPFLLKSCAKSKTFKEGQQIHGHVLKLGFDLDLYVHTSLISMYAQNG 124

Query: 128 DLNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVN 157
            L +A K+F    ++                              +D+VSW++MIS Y  
Sbjct: 125 RLEDAQKVFDRSSHRDVVSYTALITGYASRGYIESAQKMFDEIPIKDVVSWNAMISGYAE 184

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
            G    A+ +F EM++    P+E   + V+ AC+ + ++ +G  ++ ++   G F S++ 
Sbjct: 185 TGNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHG-FGSNLK 243

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
           +  ALID++ K   ++E+A ++ + ++ K+ + W  +I   T +   ++A+ LF +M+ S
Sbjct: 244 IVNALIDLYSKCG-EVETACELLEGLSNKDVISWNTLIGGYTHMNLYKEALLLFQEMLRS 302

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC----VGCSLVDMYAKCTV 333
           G  P+  T+  ++ AC+ L     G+ +H +  +    + V     +  SL+DMYAKC  
Sbjct: 303 GETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKC-- 360

Query: 334 DGSVDDSRKVFD-RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
            G +D + +V D    + ++ +W A+I G+    GR   A  +FS M +  + P+  TF 
Sbjct: 361 -GDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMH-GRANAAFDIFSRMRKNGIEPDDITFV 418

Query: 393 SVLKAC 398
            +L AC
Sbjct: 419 GLLSAC 424



 Score =  114 bits (286), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/253 (29%), Positives = 129/253 (50%), Gaps = 6/253 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  +KA+     M +    PD  T + ++ +C +S +  LG+ VHS +       N  I+
Sbjct: 186 GNYKKALELFKEMMKTNVKPDESTMATVVSACAQSGSIELGRQVHSWINDHGFGSNLKIV 245

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI LYSKCG++  A ++ + + NK D++SW+++I  Y +     +A+ +F EML  G 
Sbjct: 246 NALIDLYSKCGEVETACELLEGLSNK-DVISWNTLIGGYTHMNLYKEALLLFQEMLRSGE 304

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFL---LKCGYFDSDVCVGCALIDMFVKGSVDL 233
            PN+    +++ AC++   + IG  I+ ++   LK     +   +  +LIDM+ K   D+
Sbjct: 305 TPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSLRTSLIDMYAKCG-DI 363

Query: 234 ESAYKVFDKMTEKNTVG-WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++A +V D      ++  W  MI      G    A  +F  M  +G  PD  T  G++SA
Sbjct: 364 DAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNGIEPDDITFVGLLSA 423

Query: 293 CSELELFTSGKQL 305
           CS   +   G+ +
Sbjct: 424 CSHSGMLDLGRNI 436



 Score = 63.5 bits (153), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/148 (24%), Positives = 73/148 (49%), Gaps = 4/148 (2%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS----KLEPNSVI 115
           ++A+     M + G  P+  T   +L +C       +G+ +H  + +      +   S +
Sbjct: 290 KEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDKKLKGVVVTNASSL 349

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
             SLI +Y+KCGD++ A ++  S    R + +W++MI  +   G+   A  +F  M + G
Sbjct: 350 RTSLIDMYAKCGDIDAAPQVSDSSAFNRSLSTWNAMIFGFAMHGRANAAFDIFSRMRKNG 409

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIY 203
             P++  F  ++ ACS++  + +G  I+
Sbjct: 410 IEPDDITFVGLLSACSHSGMLDLGRNIF 437


>gi|242081959|ref|XP_002445748.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
 gi|241942098|gb|EES15243.1| hypothetical protein SORBIDRAFT_07g025050 [Sorghum bicolor]
          Length = 760

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 245/768 (31%), Positives = 414/768 (53%), Gaps = 18/768 (2%)

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
           + R+   P   + N+L++ Y +C D   A  +F  M  +RD+V+W+++I+ Y  +G    
Sbjct: 1   MIRAGYRPGLFLSNNLLAAYVRCADTRSARLLFDGM-PRRDVVTWNTLIAGYATQGSARS 59

Query: 164 AIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
           A+  F +    G    + + ++AV+ AC    +   G   +G  +  G       V  ++
Sbjct: 60  ALGAFRDARRDGAVAVDRFTYAAVLAACGGAGDWRSGRAAHGLAVVSG-LARTAFVSNSV 118

Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
           IDM+ K  + ++     FD+  E++ V W L+++   ++G P  A  + + M  SG   D
Sbjct: 119 IDMYAKCRM-IDEVRLAFDRAEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELD 177

Query: 283 RFTLSGVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
            F L G++ ACSELE     ++ LH   I+ GL LDV VG ++VDMYAK   +G ++++ 
Sbjct: 178 AFALGGILKACSELEDSEDVRRMLHGCVIKVGLDLDVFVGSTMVDMYAK---NGGLEEAI 234

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRD-----KEAVKLFSDMIQGQVAPNHFTFASVLK 396
           KVF  +   NV+ +  +I G+ + G         EAV+++S+M + ++ P+ FTF SVL+
Sbjct: 235 KVFGSIPSQNVVIYNTMIAGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLE 294

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
            C          Q++ H +  G   D+ +GN+LI++Y+++  ++D+ + F    ++ + +
Sbjct: 295 VCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARLVDDSLRCFHRTPKQEIFT 354

Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
           + +M+ A+ +N +S+KA  L   +  TGV    +T +S+++  + +      EQIH   +
Sbjct: 355 WTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAV 414

Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
           KSGF+      N+ I MY    +++AA + F+ +   +  SW+ MI  +A HG    AL 
Sbjct: 415 KSGFDRFTLCGNSQIEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALL 474

Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
           +F KM    +  N   ++AVL ACSH GLI EG++H+ SM  ++  V  ++H ACMVDLL
Sbjct: 475 LFKKMRDCSVIINEFAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVDLL 534

Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
           G  G + +A +FI S  L  D ++W T L ACR+HGD + G    E ++  +P   ++++
Sbjct: 535 GHVGKVADAEDFINSSGLENDSVLWHTLLRACRIHGDKDRGIKTGEKLMTLEPFAASSYV 594

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
           +L NLY  AG        R +M+ER + KE+G SW E       F  G+ S  +    + 
Sbjct: 595 MLYNLYMDAGKISLAMRTRGQMRERGMTKESGVSWAEFGGSCQHFVDGDNSCSQKDATFT 654

Query: 757 ELDQLALKIKEFGYLPDTNFVLHELE-EEQKV--QYLFQHSEKIAVAFGLISTSKSKPIR 813
            L++L +++K+       N  + EL  + +KV    + +H E +AVA GL +   + P+R
Sbjct: 655 RLEELLVRVKQKTERSSMN--VWELGFQNRKVSENSIGKHGELLAVALGLSTLPNTAPVR 712

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           V KN R+  + H  +K +S    REI++RD  RFHH   G CSC  YW
Sbjct: 713 VMKNQRMSWEGHETLKLLSESENREIIIRDPTRFHHFSQGSCSCRGYW 760



 Score =  204 bits (520), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 156/564 (27%), Positives = 279/564 (49%), Gaps = 30/564 (5%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  TY+ +L +C  + ++  G+  H L   S L   + + NS+I +Y+KC  ++E    F
Sbjct: 76  DRFTYAAVLAACGGAGDWRSGRAAHGLAVVSGLARTAFVSNSVIDMYAKCRMIDEVRLAF 135

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
                +RD VSW+ ++S+YV  G    A ++ V M   G   + +    +++ACS  E+ 
Sbjct: 136 DR-AEERDEVSWNLLLSAYVRMGWPEVAANVLVWMHRSGVELDAFALGGILKACSELEDS 194

Query: 197 A-IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
             +  +++G ++K G  D DV VG  ++DM+ K    LE A KVF  +  +N V +  MI
Sbjct: 195 EDVRRMLHGCVIKVG-LDLDVFVGSTMVDMYAKNG-GLEEAIKVFGSIPSQNVVIYNTMI 252

Query: 256 TRCTQLG---CPR---DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
               +LG   CP    +A+R++ +M      P +FT   V+  C+        +Q+H+  
Sbjct: 253 AGFARLGNDPCPEIRMEAVRIYSNMFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQIHAHV 312

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I  G   D  +G +L+++Y+K  +   VDDS + F R     + +WT++IT +V++   D
Sbjct: 313 ILFGFEDDEFIGNALINLYSKARL---VDDSLRCFHRTPKQEIFTWTSMITAFVRNEHSD 369

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           K A+ LF  +    V P+ FT +SV+ AC +L      EQ++ +AVK G       GNS 
Sbjct: 370 K-ALNLFKGLRYTGVEPDQFTMSSVMNACADLSMPIACEQIHCYAVKSGFDRFTLCGNSQ 428

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MY  +G ++ A+K FE +   +  S++ M+ +YA + +  +A  L  ++ D  V  + 
Sbjct: 429 IEMYRCTGDLKAAKKTFERIPSLDTFSWSQMILSYAVHGHEREALLLFKKMRDCSVIINE 488

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKS-----GFESNHCIYNALISMYSRCANVEAAF 544
           + F ++L   S  G I +G + +  ++         +   C+ + L+    + A+ E  F
Sbjct: 489 FAFLAVLVACSHQGLIDEGFRHYESMVSDYSFVPDVKHIACMVD-LLGHVGKVADAE-DF 546

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP-NGITYIAVLSACSHA 603
                +E+ +V+ W +++     HG   R ++   K++   ++P    +Y+ + +    A
Sbjct: 547 INSSGLENDSVL-WHTLLRACRIHGDKDRGIKTGEKLMT--LEPFAASSYVMLYNLYMDA 603

Query: 604 GLIS-----EGWKHFRSMYDEHGI 622
           G IS      G    R M  E G+
Sbjct: 604 GKISLAMRTRGQMRERGMTKESGV 627



 Score = 86.7 bits (213), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 61/234 (26%), Positives = 117/234 (50%), Gaps = 3/234 (1%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++   P   T+  +L+ C  +      + +H+ +     E +  I N+LI+LYSK   
Sbjct: 277 MFRRRIRPSKFTFKSVLEVCNLTNAVRCWRQIHAHVILFGFEDDEFIGNALINLYSKARL 336

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           ++++ + F     K++I +W+SMI+++V       A+++F  +   G  P+++  S+V+ 
Sbjct: 337 VDDSLRCFHRT-PKQEIFTWTSMITAFVRNEHSDKALNLFKGLRYTGVEPDQFTMSSVMN 395

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC++         I+ + +K G FD     G + I+M+ + + DL++A K F+++   +T
Sbjct: 396 ACADLSMPIACEQIHCYAVKSG-FDRFTLCGNSQIEMY-RCTGDLKAAKKTFERIPSLDT 453

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
             W+ MI      G  R+A+ LF  M     + + F    V+ ACS   L   G
Sbjct: 454 FSWSQMILSYAVHGHEREALLLFKKMRDCSVIINEFAFLAVLVACSHQGLIDEG 507


>gi|224124578|ref|XP_002330058.1| predicted protein [Populus trichocarpa]
 gi|222871483|gb|EEF08614.1| predicted protein [Populus trichocarpa]
          Length = 568

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 222/542 (40%), Positives = 334/542 (61%), Gaps = 27/542 (4%)

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
           +G + ++RKVFD+M + NV+SWTA+I GYVQ G   +EA  LF  M      P     + 
Sbjct: 38  NGMISEARKVFDKMPERNVVSWTAMIRGYVQEG-LIEEAELLFWRM------PERNVVSW 90

Query: 394 VLKACGNLLDSNV--AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            +   G + D  V  A Q++     +    D     ++I      GR+ +AR+ F+ + +
Sbjct: 91  TVMLGGLIEDGRVDEARQLFDMMPVK----DVVASTNMIDGLCSEGRLIEAREIFDEMPQ 146

Query: 452 KNLV-------------SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +N+V             +++TM+  Y +     +A  L   ++  GV  S  +  S+LS 
Sbjct: 147 RNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALALFSLMQREGVRPSFPSVISVLSV 206

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
             S+ ++  G Q+H+++++S F+ +  + + LI+MY +C ++  A +VF     ++++ W
Sbjct: 207 CGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYIKCGDLVTAKRVFDRFSSKDIVMW 266

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
            S+I G+A+HGF  +ALE+F+ M +  I P+ IT+I VLSACS+ G + EG + F SM  
Sbjct: 267 NSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIGVLSACSYTGKVKEGLEIFESMKS 326

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           ++ +  + EHYACMVDLLGR+G L EA+  I +MP+ AD +VW   LGACR H + +L +
Sbjct: 327 KYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAE 386

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
            AA+ +L+ +P +   +ILLSNLY+S   W+ V  +RK M+ +NL K  GCSWIE D KV
Sbjct: 387 IAAKKLLQLEPNNAGPYILLSNLYSSQSRWKDVVELRKTMRAKNLRKSPGCSWIEVDKKV 446

Query: 739 HKFH-VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
           H F   G TSHP+   I  +L +L   ++E GY PD +FV+H+++EE+KV  L  HSEK+
Sbjct: 447 HIFSGGGSTSHPEHEMILKKLGKLGALLREAGYCPDGSFVMHDVDEEEKVHSLRDHSEKL 506

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           AVA+GL+   +  PIRV KNLRVCGD H+ IK I+ VTGREI+LRD+NRFHH KDG CSC
Sbjct: 507 AVAYGLLKVPEGMPIRVMKNLRVCGDSHSTIKLIAQVTGREIILRDTNRFHHFKDGLCSC 566

Query: 858 ND 859
           +D
Sbjct: 567 SD 568



 Score =  139 bits (351), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 190/417 (45%), Gaps = 77/417 (18%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E N++  N L+S Y + G ++EA K+F  M  +R++VSW++MI  YV  G   +A  +F 
Sbjct: 22  ETNTISWNGLVSGYVQNGMISEARKVFDKM-PERNVVSWTAMIRGYVQEGLIEEAELLFW 80

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS-----------DVCV 218
            M E                     NV    ++ G L++ G  D            DV  
Sbjct: 81  RMPE--------------------RNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVA 120

Query: 219 GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI-------TRCTQL------GCPR 265
              +ID        +E A ++FD+M ++N V WT MI       T  T +      G   
Sbjct: 121 STNMIDGLCSEGRLIE-AREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFEL 179

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           +A+ LF  M   G  P   ++  V+S C  L     G+Q+HS  +R+   +D+ V   L+
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
            MY KC   G +  +++VFDR    +++ W +II GY Q G  +K A+++F DM    +A
Sbjct: 240 TMYIKC---GDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEK-ALEVFHDMFSSSIA 295

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS------------LISMY 433
           P+  TF  VL AC            YT  VK G  + + + +             ++ + 
Sbjct: 296 PDEITFIGVLSACS-----------YTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLL 344

Query: 434 ARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN-SEKAFELLHEIEDTGVG 486
            R+G++ +A    E++  E + + +  ++ A    KNL+ +E A + L ++E    G
Sbjct: 345 GRAGKLNEAMNLIENMPVEADAIVWGALLGACRTHKNLDLAEIAAKKLLQLEPNNAG 401



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 93/377 (24%), Positives = 174/377 (46%), Gaps = 54/377 (14%)

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS-------- 287
           A K+FDKM E NT+ W  +++   Q G   +A ++F  M      P+R  +S        
Sbjct: 13  ARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKM------PERNVVSWTAMIRGY 66

Query: 288 ---GVVSACSELELFTSGKQLHSWAIRTGLAL------------------DVCVGCSLVD 326
              G++     L      + + SW +  G  +                  DV    +++D
Sbjct: 67  VQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVVASTNMID 126

Query: 327 MYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG------------GRDKEAVK 374
               C+ +G + ++R++FD M   NV++WT++I+G    G            G + EA+ 
Sbjct: 127 --GLCS-EGRLIEAREIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFELEALA 183

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LFS M +  V P+  +  SVL  CG+L   +   QV++  V+    +D  V + LI+MY 
Sbjct: 184 LFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLITMYI 243

Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
           + G +  A++ F+    K++V +N+++  YA++   EKA E+ H++  + +     TF  
Sbjct: 244 KCGDLVTAKRVFDRFSSKDIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDEITFIG 303

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME- 551
           +LS  S  G + +G +I    +KS ++ +     Y  ++ +  R   +  A  + + M  
Sbjct: 304 VLSACSYTGKVKEGLEIFES-MKSKYQVDPKTEHYACMVDLLGRAGKLNEAMNLIENMPV 362

Query: 552 DRNVISWTSMITGFAKH 568
           + + I W +++     H
Sbjct: 363 EADAIVWGALLGACRTH 379



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 55/199 (27%), Positives = 93/199 (46%), Gaps = 3/199 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+    LM ++G  P   +   +L  C    +   G+ VHS L RS+ + +  + + LI
Sbjct: 180 EALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVSSVLI 239

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           ++Y KCGDL  A ++F    +K DIV W+S+I+ Y   G    A+ +F +M      P+E
Sbjct: 240 TMYIKCGDLVTAKRVFDRFSSK-DIVMWNSIIAGYAQHGFGEKALEVFHDMFSSSIAPDE 298

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
             F  V+ ACS T  V  G  I+  +      D        ++D+  +    L  A  + 
Sbjct: 299 ITFIGVLSACSYTGKVKEGLEIFESMKSKYQVDPKTEHYACMVDLLGRAG-KLNEAMNLI 357

Query: 241 DKM-TEKNTVGWTLMITRC 258
           + M  E + + W  ++  C
Sbjct: 358 ENMPVEADAIVWGALLGAC 376



 Score = 69.7 bits (169), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 67/296 (22%), Positives = 123/296 (41%), Gaps = 59/296 (19%)

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y ++ R  +ARK F+ + E N +S+N +V  Y +N    +A ++  ++ +  V     ++
Sbjct: 4   YFQNKRPREARKLFDKMPETNTISWNGLVSGYVQNGMISEARKVFDKMPERNV----VSW 59

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS-------------------- 532
            +++ G    G I + E +  R+ +    S   +   LI                     
Sbjct: 60  TAMIRGYVQEGLIEEAELLFWRMPERNVVSWTVMLGGLIEDGRVDEARQLFDMMPVKDVV 119

Query: 533 --------MYSRCANVEAAFQVFKEMEDRNVISWTSMITG-------------FAKHGFA 571
                   + S    +EA  ++F EM  RNV++WTSMI+G             + + GF 
Sbjct: 120 ASTNMIDGLCSEGRLIEAR-EIFDEMPQRNVVAWTSMISGEKDDGTWSTMIKIYERKGFE 178

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW----KHFRSMYDEHGIVQRME 627
             AL +F  M  +G++P+  + I+VLS C     +  G     +  RS +D    V    
Sbjct: 179 LEALALFSLMQREGVRPSFPSVISVLSVCGSLASLDHGRQVHSQLVRSQFDIDIYVS--- 235

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
             + ++ +  + G L  A         S D+++W + +     HG    G+ A E+
Sbjct: 236 --SVLITMYIKCGDLVTAKRVFDRFS-SKDIVMWNSIIAGYAQHG---FGEKALEV 285


>gi|297609253|ref|NP_001062888.2| Os09g0327200 [Oryza sativa Japonica Group]
 gi|255678787|dbj|BAF24802.2| Os09g0327200 [Oryza sativa Japonica Group]
          Length = 739

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/744 (34%), Positives = 415/744 (55%), Gaps = 55/744 (7%)

Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
           +LEP  +  N  I+ + + G + +A ++F +M  +R   ++++M++ Y   G+   A  +
Sbjct: 33  RLEPEVIRSNKAITAHMRAGRVADAERLFAAM-PRRSTSTYNAMLAGYSANGRLPLAASL 91

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F  +      P+ Y ++ ++ A + + ++A            G FD          ++ +
Sbjct: 92  FRAIPR----PDNYSYNTLLHALAVSSSLADAR---------GLFDEMPVRDSVTYNVMI 138

Query: 228 K-----GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-----LDMILS 277
                 G V L   Y  FD   EK+ V W  M+    + G   +A  LF      D+I  
Sbjct: 139 SSHANHGLVSLARHY--FDLAPEKDAVSWNGMLAAYVRNGRVEEARGLFNSRTEWDVISW 196

Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
             L   +   G +S   EL     G+ + SW I             +V  YA+    G +
Sbjct: 197 NALMSGYVQWGKMSEARELFDRMPGRDVVSWNI-------------MVSGYAR---RGDM 240

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
            ++R++FD     +V +WTA+++GY Q+G  + EA ++F  M +      +   A+ ++ 
Sbjct: 241 VEARRLFDAAPVRDVFTWTAVVSGYAQNGMLE-EARRVFDAMPERNAVSWNAMVAAYIQR 299

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
              ++D   A++++     R  A      N++++ YA++G +E+A+  F+++ +K+ VS+
Sbjct: 300 --RMMDE--AKELFNMMPCRNVA----SWNTMLTGYAQAGMLEEAKAVFDTMPQKDAVSW 351

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+ AY++   SE+  +L  E+   G   +   FA +LS  + I A+  G Q+H R+I+
Sbjct: 352 AAMLAAYSQGGCSEETLQLFIEMGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIR 411

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +G+     + NAL++MY +C N+E A   F+EME+R+V+SW +MI G+A+HGF   ALEI
Sbjct: 412 AGYGVGCFVGNALLAMYFKCGNMEDARNAFEEMEERDVVSWNTMIAGYARHGFGKEALEI 471

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F  M     KP+ IT + VL+ACSH+GL+ +G  +F SM+ + G+  + EHY CM+DLLG
Sbjct: 472 FDMMRTTSTKPDDITLVGVLAACSHSGLVEKGISYFYSMHHDFGVTAKPEHYTCMIDLLG 531

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R+G L EA + ++ MP   D  +W   LGA R+H + ELG+ AAE I E +P++   ++L
Sbjct: 532 RAGRLAEAHDLMKDMPFEPDSTMWGALLGASRIHRNPELGRSAAEKIFELEPENAGMYVL 591

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           LSN+YAS+G W     +R  M+ER + K  G SWIE  NKVH F  G+  HP+  +IYA 
Sbjct: 592 LSNIYASSGKWRDARKMRVMMEERGVKKVPGFSWIEVQNKVHTFSAGDCVHPEKEKIYAF 651

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
           L+ L +++K+ GY+  T+ VLH++EEE+K   L  HSEK+AVA+G+++    +PIRV KN
Sbjct: 652 LEDLDMRMKKAGYVSATDMVLHDVEEEEKEHMLKYHSEKLAVAYGILNIPPGRPIRVIKN 711

Query: 818 LRVCGDCHTAIK-YISM---VTGR 837
           LRVCGDCH A K +I +   V+GR
Sbjct: 712 LRVCGDCHNAFKAWIELMLKVSGR 735



 Score = 65.9 bits (159), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 36/131 (27%), Positives = 66/131 (50%), Gaps = 1/131 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G   +   ++ +L +C        G  +H  L R+       + N+L+++Y KCG+
Sbjct: 374 MGRCGEWVNRSAFACVLSTCADIAALECGMQLHGRLIRAGYGVGCFVGNALLAMYFKCGN 433

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A   F+ M  +RD+VSW++MI+ Y   G   +A+ +F  M      P++     V+ 
Sbjct: 434 MEDARNAFEEM-EERDVVSWNTMIAGYARHGFGKEALEIFDMMRTTSTKPDDITLVGVLA 492

Query: 189 ACSNTENVAIG 199
           ACS++  V  G
Sbjct: 493 ACSHSGLVEKG 503


>gi|449467070|ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  433 bits (1113), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 221/590 (37%), Positives = 349/590 (59%), Gaps = 35/590 (5%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQLH+  ++T   L       L  + + C  + S   ++ +F  +    V  W   +  +
Sbjct: 32  KQLHAHLLKTNSPLS---SLPLSRVASVCAFNSSFSYAKLIFQLLDASEVTHWNTCLRSF 88

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            + G    +A+ LF  + +  ++P+H+T + VLKAC  LLD    + V+ +  K G   +
Sbjct: 89  AE-GDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSN 147

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN------------------------ 458
             + N ++ +YA  G +  ARK F+ + +++++++N                        
Sbjct: 148 MFLQNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPE 207

Query: 459 -------TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
                  +M+  YA+   S++A +L  E+ED G+  +  T  ++L   + +G +  G +I
Sbjct: 208 RNVRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRI 267

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H    +SG+E N  + N LI MY +C  +E A ++F  ME+R V+SW++MI G A HG A
Sbjct: 268 HDFSNRSGYEKNIRVCNTLIDMYVKCGCLEDACRIFDNMEERTVVSWSAMIAGLAAHGRA 327

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             AL +F KM+  G+KPN +T+I +L ACSH G++ +G K+F SM  ++GIV R+EHY C
Sbjct: 328 EDALALFNKMINTGVKPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC 387

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           MVDL  R+G L EA EFI +MP++ + +VW   LG C+VH + +L + A   + + DP +
Sbjct: 388 MVDLFSRAGLLQEAHEFIMNMPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLDPLN 447

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              +++LSN+YA AG WE VA +RK M++R + K  G S I  +  V+ F  G+ +HP+T
Sbjct: 448 DGYYVVLSNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQT 507

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
            EI+   ++L  ++K  GY+P+T+ VL ++EE+QK ++L++HSEK+AV FGLI T+    
Sbjct: 508 EEIFQTWEKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTV 567

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           IR+ KNLRVC DCH A+K IS+V+ REIV+RD NRFH  K+G CSC DYW
Sbjct: 568 IRIMKNLRVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617



 Score =  165 bits (418), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 135/513 (26%), Positives = 230/513 (44%), Gaps = 83/513 (16%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           K +H+ L ++    +S+ L+ + S+ +     + A  IF+ + +  ++  W++ + S+  
Sbjct: 32  KQLHAHLLKTNSPLSSLPLSRVASVCAFNSSFSYAKLIFQLL-DASEVTHWNTCLRSFAE 90

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY------ 211
                DAI +F  + E    P+ Y  S V++ACS   +V  G I++G++ K G       
Sbjct: 91  GDSPADAISLFYRLREFDISPDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFL 150

Query: 212 --------------------FDS----DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
                               FD     DV     +I   VK   D E AYK+F +M E+N
Sbjct: 151 QNMIVHLYALCGEIGVARKVFDKMPQRDVITWNIMIARLVKMG-DAEGAYKLFAEMPERN 209

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
              WT MI    Q G  ++AI LFL+M  +G LP+  T+  V+ AC+++     G+++H 
Sbjct: 210 VRSWTSMIGGYAQCGKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHD 269

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           ++ R+G   ++ V  +L+DMY KC   G ++D+ ++FD M +  V+SW+A+I G + + G
Sbjct: 270 FSNRSGYEKNIRVCNTLIDMYVKC---GCLEDACRIFDNMEERTVVSWSAMIAG-LAAHG 325

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
           R ++A+ LF+ MI   V PN  TF  +L AC ++                          
Sbjct: 326 RAEDALALFNKMINTGVKPNAVTFIGILHACSHM-------------------------- 359

Query: 428 SLISMYARSGRMEDARKAFESLFEK-----NLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
                    G +E  RK F S+         +  Y  MVD +++    ++A E    I +
Sbjct: 360 ---------GMVEKGRKYFASMTRDYGIVPRIEHYGCMVDLFSRAGLLQEAHEF---IMN 407

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             +  +   + +LL G      I   E+    + K     N   Y  L ++Y+     E 
Sbjct: 408 MPIAPNGVVWGALLGGCKVHKNIKLAEEATRHLSKLD-PLNDGYYVVLSNIYAEAGRWED 466

Query: 543 AFQVFKEMEDRNV---ISWTSMITGFAKHGFAA 572
             +V K M DR V     W+S++     + F A
Sbjct: 467 VARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVA 499



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 177/399 (44%), Gaps = 70/399 (17%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T S +LK+C R  +   GK+VH  + +  L+ N  + N ++ LY+ CG++  A K+
Sbjct: 111 PDHYTCSFVLKACSRLLDVRNGKIVHGYVEKLGLQSNMFLQNMIVHLYALCGEIGVARKV 170

Query: 136 FKSMGNK------------------------------RDIVSWSSMISSYVNRGKQVDAI 165
           F  M  +                              R++ SW+SMI  Y   GK  +AI
Sbjct: 171 FDKMPQRDVITWNIMIARLVKMGDAEGAYKLFAEMPERNVRSWTSMIGGYAQCGKSKEAI 230

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
            +F+EM + G  PNE    AV+ AC++  N+ +G  I+ F  + GY + ++ V   LIDM
Sbjct: 231 DLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGY-EKNIRVCNTLIDM 289

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           +VK    LE A ++FD M E+  V W+ MI      G   DA+ LF  MI +G  P+  T
Sbjct: 290 YVKCGC-LEDACRIFDNMEERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGVKPNAVT 348

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
             G++ ACS + +   G++                       +A  T D  +    + + 
Sbjct: 349 FIGILHACSHMGMVEKGRKY----------------------FASMTRDYGIVPRIEHYG 386

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M+D                 G  +EA +   +M    +APN   + ++L  C    +  
Sbjct: 387 CMVD------------LFSRAGLLQEAHEFIMNM---PIAPNGVVWGALLGGCKVHKNIK 431

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
           +AE+   H  K    L+D     L ++YA +GR ED  +
Sbjct: 432 LAEEATRHLSKLD-PLNDGYYVVLSNIYAEAGRWEDVAR 469



 Score = 92.0 bits (227), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++AI     M   G  P+  T   +L +C    N  LG+ +H    RS  E N  + 
Sbjct: 224 GKSKEAIDLFLEMEDAGLLPNEVTVVAVLVACADMGNLVLGRRIHDFSNRSGYEKNIRVC 283

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI +Y KCG L +A +IF +M  +R +VSWS+MI+     G+  DA+ +F +M+  G 
Sbjct: 284 NTLIDMYVKCGCLEDACRIFDNM-EERTVVSWSAMIAGLAAHGRAEDALALFNKMINTGV 342

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLES 235
            PN   F  ++ ACS+   V  G   +  + +  G        GC ++D+F +  +  E+
Sbjct: 343 KPNAVTFIGILHACSHMGMVEKGRKYFASMTRDYGIVPRIEHYGC-MVDLFSRAGLLQEA 401

Query: 236 AYKVFDKMTEKNTVGWTLMITRC 258
              + +     N V W  ++  C
Sbjct: 402 HEFIMNMPIAPNGVVWGALLGGC 424


>gi|356522522|ref|XP_003529895.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Glycine max]
          Length = 911

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 253/829 (30%), Positives = 417/829 (50%), Gaps = 81/829 (9%)

Query: 72  KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE 131
           KG   D    +++LK C+      LG  VH+ L +   + +  +  +LI+LY KC  ++ 
Sbjct: 125 KGVKFDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDR 184

Query: 132 ANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
           AN++F     + D + W++++ + +   +  DA+ +   M        +     +++AC 
Sbjct: 185 ANQVFDETPLQEDFL-WNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACG 243

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
               +  G  I+G++++ G   S+  +  +++ M+ + +  LE A  VFD   + N   W
Sbjct: 244 KLRALNEGKQIHGYVIRFGRV-SNTSICNSIVSMYSRNN-RLELARAVFDSTEDHNLASW 301

Query: 252 TLMITRCTQLGCPRDAIRLFLDM--------------ILSG------------------- 278
             +I+     GC   A  LF +M              +LSG                   
Sbjct: 302 NSIISSYAVNGCLNGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQS 361

Query: 279 --FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
             F PD  +++  + A  EL  F  GK++H + +R+ L  DV V  SLVDMY K   +  
Sbjct: 362 AGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIK---NDC 418

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           ++ +  VF    + N+ +W ++I+GY   G        LF +                  
Sbjct: 419 LEKAEVVFHHTKNKNICAWNSLISGYTYKG--------LFDN------------------ 452

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL----FEK 452
                     AE++     + G   D    NSL+S Y+ SG  E+A      +       
Sbjct: 453 ----------AEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTP 502

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           N+VS+  M+    +N N   A +   ++++  V  ++ T ++LL   +    + KGE+IH
Sbjct: 503 NVVSWTAMISGCCQNENYTDALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIH 562

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
              +K GF  +  I  ALI MYS+   ++ A +VF+ ++++ +  W  M+ G+A +G   
Sbjct: 563 CFSMKHGFVDDIYIATALIDMYSKGGKLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGE 622

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACM 632
               +F  M   GI+P+ IT+ A+LS C ++GL+ +GWK+F SM  ++ I   +EHY+CM
Sbjct: 623 EVFTLFDNMCKTGIRPDAITFTALLSGCKNSGLVMDGWKYFDSMKTDYSINPTIEHYSCM 682

Query: 633 VDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDP 692
           VDLLG++G L EAL+FI +MP  AD  +W   L ACR+H D ++ + AA  +   +P + 
Sbjct: 683 VDLLGKAGFLDEALDFIHAMPQKADASIWGAVLAACRLHKDIKIAEIAARNLFRLEPYNS 742

Query: 693 AAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTL 752
           A ++L+ N+Y++   W  V  +++ M    +      SWI+    +H F     SHP+  
Sbjct: 743 ANYVLMMNIYSTFERWGDVERLKESMTAMGVKIPNVWSWIQVRQTIHVFSTEGKSHPEEG 802

Query: 753 EIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPI 812
           EIY +L QL  +IK+ GY+PDTN V   +++ +K + L  H+EK+A+ +GL+      PI
Sbjct: 803 EIYFDLYQLISEIKKLGYVPDTNCVHQNIDDSEKEKVLLSHTEKLAMTYGLMKIKGGTPI 862

Query: 813 RVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           RV KN R+C DCHTA KYIS+   REI LRD  RFHH  +G+CSCND W
Sbjct: 863 RVVKNTRICQDCHTAAKYISLARNREIFLRDGGRFHHFMNGECSCNDRW 911



 Score =  164 bits (416), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/457 (24%), Positives = 213/457 (46%), Gaps = 41/457 (8%)

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGC-PRDAIRLFLDMILSGFLPDRFTLSGVV 290
           D ESA KVF     +N + W   +      G    + + +F ++   G   D   L+ V+
Sbjct: 79  DFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVVL 138

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
             C  L     G ++H+  ++ G  +DV + C+L+++Y KC     +D + +VFD     
Sbjct: 139 KICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCL---GIDRANQVFDETPLQ 195

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
               W  I+   ++S  R ++A++L   M          T   +L+ACG L   N  +Q+
Sbjct: 196 EDFLWNTIVMANLRS-ERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQI 254

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + + ++ GR  +  + NS++SMY+R+ R+E AR  F+S  + NL S+N+++ +YA N   
Sbjct: 255 HGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCL 314

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSG-------------------------------- 498
             A++L  E+E + +     T+ SLLSG                                
Sbjct: 315 NGAWDLFREMESSSIKPDIITWNSLLSGHLLQGSYENVLTNIRSLQSAGFKPDSCSITSA 374

Query: 499 ---ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
                 +G    G++IH  I++S  E +  +  +L+ MY +   +E A  VF   +++N+
Sbjct: 375 LQAVIELGYFNLGKEIHGYIMRSKLEYDVYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNI 434

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
            +W S+I+G+   G    A ++  +M  +GIK + +T+ +++S  S +G   E       
Sbjct: 435 CAWNSLISGYTYKGLFDNAEKLLIQMKEEGIKADLVTWNSLVSGYSMSGCSEEALAVINR 494

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           +    G+   +  +  M+    ++ + T+AL+F   M
Sbjct: 495 I-KSLGLTPNVVSWTAMISGCCQNENYTDALQFFSQM 530



 Score =  123 bits (308), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/265 (28%), Positives = 135/265 (50%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G  + + KVF      N + W + +  +   GG   E +++F ++    V  +      V
Sbjct: 78  GDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVKFDSKALTVV 137

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           LK C  L++  +  +V+   +KRG  +D  +  +LI++Y +   ++ A + F+    +  
Sbjct: 138 LKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQVFDETPLQED 197

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
             +NT+V A  ++   E A EL   ++      +  T   LL     + A+ +G+QIH  
Sbjct: 198 FLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRALNEGKQIHGY 257

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           +I+ G  SN  I N+++SMYSR   +E A  VF   ED N+ SW S+I+ +A +G    A
Sbjct: 258 VIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTEDHNLASWNSIISSYAVNGCLNGA 317

Query: 575 LEIFYKMLADGIKPNGITYIAVLSA 599
            ++F +M +  IKP+ IT+ ++LS 
Sbjct: 318 WDLFREMESSSIKPDIITWNSLLSG 342



 Score = 96.3 bits (238), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 85/351 (24%), Positives = 139/351 (39%), Gaps = 78/351 (22%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           HL  G  +  +  +  +   G  PD  + +  L++ I    F+LGK +H  + RSKLE +
Sbjct: 343 HLLQGSYENVLTNIRSLQSAGFKPDSCSITSALQAVIELGYFNLGKEIHGYIMRSKLEYD 402

Query: 113 SVILNSLISLYSKCGDLNEANKIF----------------------------------KS 138
             +  SL+ +Y K   L +A  +F                                  K 
Sbjct: 403 VYVCTSLVDMYIKNDCLEKAEVVFHHTKNKNICAWNSLISGYTYKGLFDNAEKLLIQMKE 462

Query: 139 MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN--- 195
            G K D+V+W+S++S Y   G   +A+ +   +  LG  PN   ++A+I  C   EN   
Sbjct: 463 EGIKADLVTWNSLVSGYSMSGCSEEALAVINRIKSLGLTPNVVSWTAMISGCCQNENYTD 522

Query: 196 --------------------------------VAIGHIIYGFLLKCGYFDSDVCVGCALI 223
                                           +  G  I+ F +K G+ D D+ +  ALI
Sbjct: 523 ALQFFSQMQEENVKPNSTTISTLLRACAGPSLLKKGEEIHCFSMKHGFVD-DIYIATALI 581

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           DM+ KG   L+ A++VF  + EK    W  M+      G   +   LF +M  +G  PD 
Sbjct: 582 DMYSKGG-KLKVAHEVFRNIKEKTLPCWNCMMMGYAIYGHGEEVFTLFDNMCKTGIRPDA 640

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
            T + ++S C       SG  +  W     +  D  +  + ++ Y+ C VD
Sbjct: 641 ITFTALLSGCK-----NSGLVMDGWKYFDSMKTDYSINPT-IEHYS-CMVD 684



 Score = 72.4 bits (176), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 57/246 (23%), Positives = 108/246 (43%), Gaps = 3/246 (1%)

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK-NLNSEKAFELLHEIEDTGVG 486
           S++  Y   G  E A K F   F +N + +N+ ++ +A    +S +  E+  E+ D GV 
Sbjct: 69  SMMRNYLEFGDFESATKVFFVGFARNYLLWNSFLEEFASFGGDSHEILEVFKELHDKGVK 128

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
             +     +L    ++  +  G ++HA ++K GF+ +  +  ALI++Y +C  ++ A QV
Sbjct: 129 FDSKALTVVLKICLALMELWLGMEVHACLLKRGFQVDVHLSCALINLYEKCLGIDRANQV 188

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F E   +    W +++    +      ALE+  +M +   K    T + +L AC     +
Sbjct: 189 FDETPLQEDFLWNTIVMANLRSERWEDALELSRRMQSASAKATDGTIVKLLQACGKLRAL 248

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
           +EG K         G V        +V +  R+  L  A     S     ++  W + + 
Sbjct: 249 NEG-KQIHGYVIRFGRVSNTSICNSIVSMYSRNNRLELARAVFDSTE-DHNLASWNSIIS 306

Query: 667 ACRVHG 672
           +  V+G
Sbjct: 307 SYAVNG 312


>gi|449502858|ref|XP_004161763.1| PREDICTED: uncharacterized LOC101222622 [Cucumis sativus]
          Length = 2355

 Score =  432 bits (1112), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/577 (38%), Positives = 344/577 (59%), Gaps = 44/577 (7%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           PD +T + V+ AC+ L     G+++H +  + G   ++ V  SLVD+Y K    G    +
Sbjct: 125 PDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLYFKV---GCNCIA 181

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
           +K+FD M+  +V+SW  +I+GY  SG  DK A  +F  M++  +                
Sbjct: 182 QKLFDEMVVRDVVSWNTLISGYCFSGMVDK-ARMVFDGMMEKNLVS-------------- 226

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
                                     +++IS YAR G +E+AR+ FE++  +N+VS+N M
Sbjct: 227 -------------------------WSTMISGYARVGNLEEARQLFENMPMRNVVSWNAM 261

Query: 461 VDAYAKNLNSEKAFELLHEIE-DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           +  YA+N     A EL  +++ + G+  +  T  S+LS  + +GA+  G+ IH  I ++ 
Sbjct: 262 IAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRRNK 321

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
            E    + NAL  MY++C  V  A  VF EM +R+VISW+ +I G A +G+A  A   F 
Sbjct: 322 IEVGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVISWSIIIMGLAMYGYANEAFNFFA 381

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M+ DG++PN I+++ +L+AC+HAGL+ +G ++F  M   +GI  ++EHY C+VDLL R+
Sbjct: 382 EMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITPKIEHYGCVVDLLSRA 441

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L +A   I SMP+  +V+VW   LG CR++ D E G+     ILE D     + + L+
Sbjct: 442 GRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGERVVWRILELDSNHSGSLVYLA 501

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+YAS G  +  A+ R RM++   +K  GCSWIE +N V++F +G++SHP++L IY+ + 
Sbjct: 502 NVYASMGRLDDAASCRLRMRDNKSMKTPGCSWIEINNSVYEFFMGDSSHPQSLRIYSMIR 561

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L  K+K  GY P T+ V+H ++EE+K   L  HSEK+A+AFGLI+TS+   IR+ KNLR
Sbjct: 562 ELKWKMKVAGYKPKTDLVIHNIDEEEKEDALSTHSEKLALAFGLINTSEGTTIRIVKNLR 621

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCS 856
           VC DCH AIK IS +  REIV+RD +RFHH KDGKCS
Sbjct: 622 VCNDCHDAIKIISKIVEREIVVRDRSRFHHFKDGKCS 658



 Score =  136 bits (343), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 196/439 (44%), Gaps = 64/439 (14%)

Query: 64  FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLY 123
           F   L+     +PD  T++ +LK+C        G+ VH  +T+   E N  + NSL+ LY
Sbjct: 113 FNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQKVHCFVTKYGCESNLFVRNSLVDLY 172

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
            K G    A K+F  M   RD+VSW+++IS                           YCF
Sbjct: 173 FKVGCNCIAQKLFDEMV-VRDVVSWNTLISG--------------------------YCF 205

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           S ++             +++      G  + ++     +I  + +   +LE A ++F+ M
Sbjct: 206 SGMVDK---------ARMVFD-----GMMEKNLVSWSTMISGYARVG-NLEEARQLFENM 250

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSG 302
             +N V W  MI    Q     DAI LF  M   G L P+  TL  V+SAC+ L     G
Sbjct: 251 PMRNVVSWNAMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLG 310

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K +H +  R  + + + +G +L DMYAKC   G V +++ VF  M + +V+SW+ II G 
Sbjct: 311 KWIHRFIRRNKIEVGLFLGNALADMYAKC---GCVLEAKGVFHEMHERDVISWSIIIMGL 367

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDS-----NVAEQVYTHAV 415
              G  + EA   F++MI+  + PN  +F  +L AC    L+D      ++  QVY    
Sbjct: 368 AMYGYAN-EAFNFFAEMIEDGLEPNDISFMGLLTACTHAGLVDKGLEYFDMMPQVYGITP 426

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA---YAKNLNSE 471
           K       CV    + + +R+GR++ A     S+  + N++ +  ++     Y      E
Sbjct: 427 KIEHY--GCV----VDLLSRAGRLDQAESLINSMPMQPNVIVWGALLGGCRIYKDAERGE 480

Query: 472 KAFELLHEIEDTGVGTSAY 490
           +    + E++    G+  Y
Sbjct: 481 RVVWRILELDSNHSGSLVY 499



 Score = 77.8 bits (190), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 62/281 (22%), Positives = 128/281 (45%), Gaps = 20/281 (7%)

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHE--IEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
           N+ +YN ++ A++++          +   +         YTF S+L   + +  + +G++
Sbjct: 89  NIFAYNALLKAFSQHNAWHTTISYFNNQLVLPNAPNPDEYTFTSVLKACAGLAQVLEGQK 148

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           +H  + K G ESN  + N+L+ +Y +      A ++F EM  R+V+SW ++I+G+   G 
Sbjct: 149 VHCFVTKYGCESNLFVRNSLVDLYFKVGCNCIAQKLFDEMVVRDVVSWNTLISGYCFSGM 208

Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
             +A  +F  M+    + N +++  ++S  +  G + E  + F +M      ++ +  + 
Sbjct: 209 VDKARMVFDGMM----EKNLVSWSTMISGYARVGNLEEARQLFENM-----PMRNVVSWN 259

Query: 631 CMVDLLGRSGSLTEALEFIRSMP----LSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
            M+    ++    +A+E  R M     L+ + +   + L AC   G  +LGK     I  
Sbjct: 260 AMIAGYAQNEKYADAIELFRQMQHEGGLAPNDVTLVSVLSACAHLGALDLGKWIHRFIRR 319

Query: 687 QDPQDPAAHIL---LSNLYASAGHWEYVANIRKRMKERNLI 724
              +      L   L+++YA  G       +   M ER++I
Sbjct: 320 NKIE--VGLFLGNALADMYAKCGCVLEAKGVFHEMHERDVI 358


>gi|15235115|ref|NP_195663.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75210987|sp|Q9SVA5.1|PP357_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g39530
 gi|5042169|emb|CAB44688.1| putative protein [Arabidopsis thaliana]
 gi|7270937|emb|CAB80616.1| putative protein [Arabidopsis thaliana]
 gi|332661682|gb|AEE87082.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 834

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 241/712 (33%), Positives = 400/712 (56%), Gaps = 13/712 (1%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSC--IRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           +  +  L+    + + P+    S  +++C  +  R   +   + S L +S  + +  +  
Sbjct: 128 ESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSGFDRDVYVGT 187

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
            LI  Y K G+++ A  +F ++  K   V+W++MIS  V  G+   ++ +F +++E    
Sbjct: 188 LLIDFYLKDGNIDYARLVFDALPEK-STVTWTTMISGCVKMGRSYVSLQLFYQLMEDNVV 246

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESA 236
           P+ Y  S V+ ACS    +  G  I+  +L+ G  + D  +   LID +VK G V   +A
Sbjct: 247 PDGYILSTVLSACSILPFLEGGKQIHAHILRYG-LEMDASLMNVLIDSYVKCGRVI--AA 303

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
           +K+F+ M  KN + WT +++   Q    ++A+ LF  M   G  PD +  S ++++C+ L
Sbjct: 304 HKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKPDMYACSSILTSCASL 363

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G Q+H++ I+  L  D  V  SL+DMYAKC     + D+RKVFD     +V+ + 
Sbjct: 364 HALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDC---LTDARKVFDIFAAADVVLFN 420

Query: 357 AIITGYVQSGGRDK--EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           A+I GY + G + +  EA+ +F DM    + P+  TF S+L+A  +L    +++Q++   
Sbjct: 421 AMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLGLSKQIHGLM 480

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
            K G  LD   G++LI +Y+    ++D+R  F+ +  K+LV +N+M   Y +   +E+A 
Sbjct: 481 FKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYVQQSENEEAL 540

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L  E++ +      +TFA++++ A ++ ++  G++ H +++K G E N  I NAL+ MY
Sbjct: 541 NLFLELQLSRERPDEFTFANMVTAAGNLASVQLGQEFHCQLLKRGLECNPYITNALLDMY 600

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C + E A + F     R+V+ W S+I+ +A HG   +AL++  KM+++GI+PN IT++
Sbjct: 601 AKCGSPEDAHKAFDSAASRDVVCWNSVISSYANHGEGKKALQMLEKMMSEGIEPNYITFV 660

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            VLSACSHAGL+ +G K F  M    GI    EHY CMV LLGR+G L +A E I  MP 
Sbjct: 661 GVLSACSHAGLVEDGLKQFELML-RFGIEPETEHYVCMVSLLGRAGRLNKARELIEKMPT 719

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
               +VWR+ L  C   G+ EL +HAAEM +  DP+D  +  +LSN+YAS G W     +
Sbjct: 720 KPAAIVWRSLLSGCAKAGNVELAEHAAEMAILSDPKDSGSFTMLSNIYASKGMWTEAKKV 779

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
           R+RMK   ++KE G SWI  + +VH F   + SH K  +IY  LD L ++I+
Sbjct: 780 RERMKVEGVVKEPGRSWIGINKEVHIFLSKDKSHCKANQIYEVLDDLLVQIR 831



 Score =  289 bits (740), Expect = 4e-75,   Method: Compositional matrix adjust.
 Identities = 186/598 (31%), Positives = 323/598 (54%), Gaps = 20/598 (3%)

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
            H   +VH  +    LE ++ + N LI+LYS+ G +  A K+F+ M  +R++VSWS+M+S
Sbjct: 60  LHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKM-PERNLVSWSTMVS 118

Query: 154 SYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHI--IYGFLLKCG 210
           +  + G   +++ +F+E        PNEY  S+ I+ACS  +      +  +  FL+K G
Sbjct: 119 ACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLDGRGRWMVFQLQSFLVKSG 178

Query: 211 YFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
            FD DV VG  LID ++K G++D   A  VFD + EK+TV WT MI+ C ++G    +++
Sbjct: 179 -FDRDVYVGTLLIDFYLKDGNIDY--ARLVFDALPEKSTVTWTTMISGCVKMGRSYVSLQ 235

Query: 270 LFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYA 329
           LF  ++    +PD + LS V+SACS L     GKQ+H+  +R GL +D  +   L+D Y 
Sbjct: 236 LFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMNVLIDSYV 295

Query: 330 KCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHF 389
           KC   G V  + K+F+ M + N++SWT +++GY Q+    KEA++LF+ M +  + P+ +
Sbjct: 296 KC---GRVIAAHKLFNGMPNKNIISWTTLLSGYKQN-ALHKEAMELFTSMSKFGLKPDMY 351

Query: 390 TFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
             +S+L +C +L       QV+ + +K     D  V NSLI MYA+   + DARK F+  
Sbjct: 352 ACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVFDIF 411

Query: 450 FEKNLVSYNTMVDAYAK---NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
              ++V +N M++ Y++        +A  +  ++    +  S  TF SLL  ++S+ ++G
Sbjct: 412 AAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRASASLTSLG 471

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
             +QIH  + K G   +    +ALI +YS C  ++ +  VF EM+ ++++ W SM  G+ 
Sbjct: 472 LSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVKDLVIWNSMFAGYV 531

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           +      AL +F ++     +P+  T+  +++A  +   +  G + F     + G+    
Sbjct: 532 QQSENEEALNLFLELQLSRERPDEFTFANMVTAAGNLASVQLG-QEFHCQLLKRGLECNP 590

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
                ++D+  + GS  +A +   S   S DV+ W + + +   HG+   GK A +M+
Sbjct: 591 YITNALLDMYAKCGSPEDAHKAFDSAA-SRDVVCWNSVISSYANHGE---GKKALQML 644



 Score =  206 bits (524), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 146/525 (27%), Positives = 270/525 (51%), Gaps = 31/525 (5%)

Query: 194 ENVAIGHII-YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
           +NV  G II +G  L       D  +   LI+++ +    +  A KVF+KM E+N V W+
Sbjct: 63  QNVVHGQIIVWGLEL-------DTYLSNILINLYSRAG-GMVYARKVFEKMPERNLVSWS 114

Query: 253 LMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGK----QLHS 307
            M++ C   G   +++ +FL+   +    P+ + LS  + ACS L+    G+    QL S
Sbjct: 115 TMVSACNHHGIYEESLVVFLEFWRTRKDSPNEYILSSFIQACSGLD--GRGRWMVFQLQS 172

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           + +++G   DV VG  L+D Y K   DG++D +R VFD + + + ++WT +I+G V+  G
Sbjct: 173 FLVKSGFDRDVYVGTLLIDFYLK---DGNIDYARLVFDALPEKSTVTWTTMISGCVKM-G 228

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
           R   +++LF  +++  V P+ +  ++VL AC  L      +Q++ H ++ G  +D  + N
Sbjct: 229 RSYVSLQLFYQLMEDNVVPDGYILSTVLSACSILPFLEGGKQIHAHILRYGLEMDASLMN 288

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
            LI  Y + GR+  A K F  +  KN++S+ T++  Y +N   ++A EL   +   G+  
Sbjct: 289 VLIDSYVKCGRVIAAHKLFNGMPNKNIISWTTLLSGYKQNALHKEAMELFTSMSKFGLKP 348

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             Y  +S+L+  +S+ A+G G Q+HA  IK+   ++  + N+LI MY++C  +  A +VF
Sbjct: 349 DMYACSSILTSCASLHALGFGTQVHAYTIKANLGNDSYVTNSLIDMYAKCDCLTDARKVF 408

Query: 548 KEMEDRNVISWTSMITGFAKHGFA---ARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
                 +V+ + +MI G+++ G       AL IF  M    I+P+ +T++++L A   A 
Sbjct: 409 DIFAAADVVLFNAMIEGYSRLGTQWELHEALNIFRDMRFRLIRPSLLTFVSLLRAS--AS 466

Query: 605 LISEGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT 663
           L S G  K    +  ++G+   +   + ++D+      L ++      M +  D+++W +
Sbjct: 467 LTSLGLSKQIHGLMFKYGLNLDIFAGSALIDVYSNCYCLKDSRLVFDEMKVK-DLVIWNS 525

Query: 664 FLGACRVHGDTELGKHAAEMILE-QDPQDPAAHILLSNLYASAGH 707
                    + E    A  + LE Q  ++       +N+  +AG+
Sbjct: 526 MFAGYVQQSENE---EALNLFLELQLSRERPDEFTFANMVTAAGN 567



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 58/218 (26%), Positives = 102/218 (46%), Gaps = 12/218 (5%)

Query: 492 FASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
           FA LL   +S   +     +H +II  G E +  + N LI++YSR   +  A +VF++M 
Sbjct: 47  FARLLQLRASDDLLHYQNVVHGQIIVWGLELDTYLSNILINLYSRAGGMVYARKVFEKMP 106

Query: 552 DRNVISWTSMITGFAKHGFAARALEI---FYKMLADGIKPNGITYIAVLSACSHAGLISE 608
           +RN++SW++M++    HG    +L +   F++   D   PN     + + ACS  GL   
Sbjct: 107 ERNLVSWSTMVSACNHHGIYEESLVVFLEFWRTRKD--SPNEYILSSFIQACS--GLDGR 162

Query: 609 G-WKHF--RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           G W  F  +S   + G  + +     ++D   + G++  A     ++P  + V  W T +
Sbjct: 163 GRWMVFQLQSFLVKSGFDRDVYVGTLLIDFYLKDGNIDYARLVFDALPEKSTV-TWTTMI 221

Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYA 703
             C   G + +       ++E D   P  +IL + L A
Sbjct: 222 SGCVKMGRSYVSLQLFYQLME-DNVVPDGYILSTVLSA 258



 Score = 45.8 bits (107), Expect = 0.091,   Method: Compositional matrix adjust.
 Identities = 30/114 (26%), Positives = 53/114 (46%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + N G  +KA+  L+ M  +G  P+  T+  +L +C  +     G     L+ R  +EP 
Sbjct: 631 YANHGEGKKALQMLEKMMSEGIEPNYITFVGVLSACSHAGLVEDGLKQFELMLRFGIEPE 690

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           +     ++SL  + G LN+A ++ + M  K   + W S++S     G    A H
Sbjct: 691 TEHYVCMVSLLGRAGRLNKARELIEKMPTKPAAIVWRSLLSGCAKAGNVELAEH 744


>gi|356538057|ref|XP_003537521.1| PREDICTED: pentatricopeptide repeat-containing protein At4g14050,
           mitochondrial-like [Glycine max]
          Length = 611

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/594 (37%), Positives = 348/594 (58%), Gaps = 38/594 (6%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
            K+LH+  I+ GL     +  +L++ Y KC   G + D+ ++FD +   + ++W +++T 
Sbjct: 22  AKKLHAQIIKAGLNQHEPIPNTLLNAYGKC---GLIQDALQLFDALPRRDPVAWASLLTA 78

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL--LDSNVAEQVYTHAVKRGR 419
                 R   A+ +   ++     P+HF FAS++KAC NL  L     +QV+        
Sbjct: 79  -CNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPF 137

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA-------------- 465
           + DD V +SLI MYA+ G  +  R  F+S+   N +S+ TM+  YA              
Sbjct: 138 SDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQ 197

Query: 466 ---KNL--------------NSEKAFELLHEIEDTGVG-TSAYTFASLLSGASSIGAIGK 507
              +NL              N   AF L  E+   G+  T     +S++   +++     
Sbjct: 198 TPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWEL 257

Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           G+Q+H  +I  G+ES   I NALI MY++C+++ AA  +F EM  ++V+SWTS+I G A+
Sbjct: 258 GKQMHGVVITLGYESCLFISNALIDMYAKCSDLVAAKYIFCEMCRKDVVSWTSIIVGTAQ 317

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           HG A  AL ++ +M+  G+KPN +T++ ++ ACSHAGL+S+G   FR+M ++HGI   ++
Sbjct: 318 HGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHAGLVSKGRTLFRTMVEDHGISPSLQ 377

Query: 628 HYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
           HY C++DL  RSG L EA   IR+MP++ D   W   L +C+ HG+T++    A+ +L  
Sbjct: 378 HYTCLLDLFSRSGHLDEAENLIRTMPVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLNL 437

Query: 688 DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETS 747
            P+DP+++ILLSN+YA AG WE V+ +RK M      K  G S I+     H F+ GETS
Sbjct: 438 KPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCIDLGKGSHVFYAGETS 497

Query: 748 HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTS 807
           HP   EI   + +L  ++++ GY PDT+ VLH++++++K + LF HSE++AVA+GL+   
Sbjct: 498 HPMRDEIIGLMRELDEEMRKRGYAPDTSSVLHDMDQQEKERQLFWHSERLAVAYGLLKAV 557

Query: 808 KSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
               IR+ KNLRVCGDCHT +K IS +T REI +RD+ R+HH KDG CSCND+W
Sbjct: 558 PGTVIRIVKNLRVCGDCHTVLKLISAITNREIYVRDAKRYHHFKDGNCSCNDFW 611



 Score =  153 bits (386), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 197/401 (49%), Gaps = 66/401 (16%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           L K +H+ + ++ L  +  I N+L++ Y KCG + +A ++F ++  +RD V+W+S++++ 
Sbjct: 21  LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDAL-PRRDPVAWASLLTAC 79

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN--TENVAIGHIIYGFLLKCGYFD 213
               +   A+ +   +L  GF P+ + F+++++AC+N    +V  G  ++       + D
Sbjct: 80  NLSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSD 139

Query: 214 SDVCVGCALIDMFVK------GSVDLES------------------------AYKVFDKM 243
            DV V  +LIDM+ K      G    +S                        A+++F + 
Sbjct: 140 DDV-VKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQT 198

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF-LPDRFTLSGVVSACSELELFTSG 302
             +N   WT +I+   Q G   DA  LF++M   G  + D   LS VV AC+ L L+  G
Sbjct: 199 PYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLALWELG 258

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+H   I  G    + +  +L+DMYAKC+    +  ++ +F  M   +V+SWT+II G 
Sbjct: 259 KQMHGVVITLGYESCLFISNALIDMYAKCS---DLVAAKYIFCEMCRKDVVSWTSIIVGT 315

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA--VKRGRA 420
            Q  G+ +EA+ L+ +M+   V PN  TF  ++ AC             +HA  V +GR 
Sbjct: 316 AQH-GQAEEALALYDEMVLAGVKPNEVTFVGLIHAC-------------SHAGLVSKGRT 361

Query: 421 L------DDCVGNS------LISMYARSGRMEDARKAFESL 449
           L      D  +  S      L+ +++RSG +++A     ++
Sbjct: 362 LFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTM 402



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 104/402 (25%), Positives = 189/402 (47%), Gaps = 42/402 (10%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A ++FD +  ++ V W  ++T C     P  A+ +   ++ +GF PD F  + +V A
Sbjct: 54  IQDALQLFDALPRRDPVAWASLLTACNLSNRPHRALSISRSLLSTGFHPDHFVFASLVKA 113

Query: 293 CSELELF--TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           C+ L +     GKQ+H+    +  + D  V  SL+DMYAK    G  D  R VFD +   
Sbjct: 114 CANLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKF---GLPDYGRAVFDSISSL 170

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLF---------------SDMIQ-------------- 381
           N +SWT +I+GY +SG R  EA +LF               S ++Q              
Sbjct: 171 NSISWTTMISGYARSG-RKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEM 229

Query: 382 ---GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
              G    +    +SV+ AC NL    + +Q++   +  G      + N+LI MYA+   
Sbjct: 230 RHEGISVTDPLVLSSVVGACANLALWELGKQMHGVVITLGYESCLFISNALIDMYAKCSD 289

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           +  A+  F  +  K++VS+ +++   A++  +E+A  L  E+   GV  +  TF  L+  
Sbjct: 290 LVAAKYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHA 349

Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVI 556
            S  G + KG  +   +++  G   +   Y  L+ ++SR  +++ A  + + M  + +  
Sbjct: 350 CSHAGLVSKGRTLFRTMVEDHGISPSLQHYTCLLDLFSRSGHLDEAENLIRTMPVNPDEP 409

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
           +W ++++   +HG    A+ I   +L   +KP   +   +LS
Sbjct: 410 TWAALLSSCKRHGNTQMAVRIADHLL--NLKPEDPSSYILLS 449



 Score =  125 bits (314), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 212/493 (43%), Gaps = 87/493 (17%)

Query: 30  PSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
           P   P   A   T+  LSNR           +A+     +   G HPD   ++ L+K+C 
Sbjct: 65  PRRDPVAWASLLTACNLSNR---------PHRALSISRSLLSTGFHPDHFVFASLVKACA 115

Query: 90  RSRNFHL--GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM-------- 139
                H+  GK VH+    S    + V+ +SLI +Y+K G  +    +F S+        
Sbjct: 116 NLGVLHVKQGKQVHARFFLSPFSDDDVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISW 175

Query: 140 ----------GNK------------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF- 176
                     G K            R++ +W+++IS  V  G  VDA H+FVEM   G  
Sbjct: 176 TTMISGYARSGRKFEAFRLFRQTPYRNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGIS 235

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +    S+V+ AC+N     +G  ++G ++  GY +S + +  ALIDM+ K S DL +A
Sbjct: 236 VTDPLVLSSVVGACANLALWELGKQMHGVVITLGY-ESCLFISNALIDMYAKCS-DLVAA 293

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +F +M  K+ V WT +I    Q G   +A+ L+ +M+L+G  P+  T  G++ ACS  
Sbjct: 294 KYIFCEMCRKDVVSWTSIIVGTAQHGQAEEALALYDEMVLAGVKPNEVTFVGLIHACSHA 353

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
            L + G+ L     RT                              V D  +  ++  +T
Sbjct: 354 GLVSKGRTL----FRT-----------------------------MVEDHGISPSLQHYT 380

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
            ++  + +SG  D EA  L   M    V P+  T+A++L +C    ++ +A ++  H + 
Sbjct: 381 CLLDLFSRSGHLD-EAENLIRTM---PVNPDEPTWAALLSSCKRHGNTQMAVRIADHLLN 436

Query: 417 RGRALDDCVGNSLISMYARSGRMED---ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
             +  D      L ++YA +G  ED    RK   +L  K    Y+ +     K  +   A
Sbjct: 437 L-KPEDPSSYILLSNIYAGAGMWEDVSKVRKLMMTLEAKKAPGYSCI--DLGKGSHVFYA 493

Query: 474 FELLHEIEDTGVG 486
            E  H + D  +G
Sbjct: 494 GETSHPMRDEIIG 506



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 68/310 (21%), Positives = 144/310 (46%), Gaps = 48/310 (15%)

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           +A++++   +K G    + + N+L++ Y + G ++DA + F++L  ++ V++ +++ A  
Sbjct: 21  LAKKLHAQIIKAGLNQHEPIPNTLLNAYGKCGLIQDALQLFDALPRRDPVAWASLLTACN 80

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA--IGKGEQIHARIIKSGFESN 523
            +    +A  +   +  TG     + FASL+   +++G   + +G+Q+HAR   S F  +
Sbjct: 81  LSNRPHRALSISRSLLSTGFHPDHFVFASLVKACANLGVLHVKQGKQVHARFFLSPFSDD 140

Query: 524 HCIYNALISM-------------------------------YSRCANVEAAFQVFKEMED 552
             + ++LI M                               Y+R      AF++F++   
Sbjct: 141 DVVKSSLIDMYAKFGLPDYGRAVFDSISSLNSISWTTMISGYARSGRKFEAFRLFRQTPY 200

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIK-PNGITYIAVLSACSHAGLISEGWK 611
           RN+ +WT++I+G  + G    A  +F +M  +GI   + +   +V+ AC++  L    W+
Sbjct: 201 RNLFAWTALISGLVQSGNGVDAFHLFVEMRHEGISVTDPLVLSSVVGACANLAL----WE 256

Query: 612 HFRSMYDEHGIVQRMEHYAC------MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
             + M   HG+V  + + +C      ++D+  +   L  A ++I       DV+ W + +
Sbjct: 257 LGKQM---HGVVITLGYESCLFISNALIDMYAKCSDLVAA-KYIFCEMCRKDVVSWTSII 312

Query: 666 GACRVHGDTE 675
                HG  E
Sbjct: 313 VGTAQHGQAE 322


>gi|297833632|ref|XP_002884698.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330538|gb|EFH60957.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 685

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/596 (36%), Positives = 353/596 (59%), Gaps = 4/596 (0%)

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           + + LFL +   G     FT   V+ AC+       G  LHS  ++ G   DV    SL+
Sbjct: 94  ETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLHSLVVKCGFNHDVAAMTSLL 153

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
            +Y+     G ++D+ KVF+ + + +V++WTA+ +GY  + G+ +EA+ LF  M++  V 
Sbjct: 154 SIYSG---SGRLNDAHKVFEEIPERSVVTWTALFSGYT-TAGKHREAIDLFKKMVEMGVR 209

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
           P+ +    VL AC ++ D +  E +  H  +     +  V  +L+++YA+ G+ME AR  
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F+S+ EK++V+++TM+  YA N   ++  E   ++    +    ++    LS  +S+GA+
Sbjct: 270 FDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKPDQFSIVGFLSSCASLGAL 329

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
             GE   + I +  F +N  + NALI MY++C  +   F+VFKEM++++++   + I+G 
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           AK+G    +  +F +    GI P+G T++ +L  C HAGLI +G + F ++   + + + 
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
           +EHY CMVDL GR+G L +A   I  MP+  + +VW   L  CR+  DT+L +   + ++
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
             +P +   ++ LSN+Y+ +G W+  A +R  M  + + K  G SWIE +  VH+F   +
Sbjct: 510 ALEPWNAGNYVQLSNIYSVSGRWDEAAEVRDMMNRKGMKKIPGYSWIELEGTVHEFLADD 569

Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
            SHP + +IYA+L+ L  +++  G++P T FV  ++E+E+K + L  HSEK+AVAFGLIS
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEDEEKERVLGHHSEKLAVAFGLIS 629

Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           T   + IRV KNLRVCGDCH  +K IS +T REIV+RD+NRFH   +G CSCNDYW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 120/410 (29%), Positives = 209/410 (50%), Gaps = 26/410 (6%)

Query: 48  NRLIYH-LNDGRVQKAIF--TLDLMTQKGNHP-DLD--TYSLLLKSCIRSRNFHLGKLVH 101
           N  +Y+ L +G V   +F  TLDL      H  +L   T+ L+LK+C R+ N  LG  +H
Sbjct: 75  NIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLH 134

Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQ 161
           SL+ +     +   + SL+S+YS  G LN+A+K+F+ +  +R +V+W+++ S Y   GK 
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEI-PERSVVTWTALFSGYTTAGKH 193

Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
            +AI +F +M+E+G  P+ Y    V+ AC +  ++  G  I   + +      +  V   
Sbjct: 194 REAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEM-EMQKNSFVRTT 252

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           L++++ K    +E A  VFD M EK+ V W+ MI        P++ I  FL M+     P
Sbjct: 253 LVNLYAKCG-KMEKARSVFDSMGEKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENLKP 311

Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
           D+F++ G +S+C+ L     G+   S   R     ++ +  +L+DMYAKC   G++    
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC---GAMARGF 368

Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--- 398
           +VF  M + +++   A I+G  ++ G  K +  +F    +  ++P+  TF  +L  C   
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKN-GHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427

Query: 399 GNLLDS----NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
           G + D     N    VY  A+KR      C    ++ ++ R+G ++DA +
Sbjct: 428 GLIQDGLRFFNAISCVY--ALKRTVEHYGC----MVDLWGRAGMLDDAYR 471



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/314 (23%), Positives = 137/314 (43%), Gaps = 50/314 (15%)

Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
           N+  YNT+++ +  N    +  +L   I   G+    +TF  +L   +       G  +H
Sbjct: 75  NIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLH 134

Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
           + ++K GF  +     +L+S+YS    +  A +VF+E+ +R+V++WT++ +G+   G   
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHR 194

Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-W--KHFRSMYDEHGIVQRMEHY 629
            A+++F KM+  G++P+    + VLSAC H G +  G W  KH   M  +     R    
Sbjct: 195 EAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQKNSFVR---- 250

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT-------------------------- 663
             +V+L  + G + +A     SM    D++ W T                          
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSMG-EKDIVTWSTMIQGYASNSFPKEGIEFFLQMLQENL 309

Query: 664 ---------FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN----LYASAGHWEY 710
                    FL +C   G  +LG+    +I   D  +   ++ ++N    +YA  G    
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLI---DRHEFLTNLFMANALIDMYAKCGAMAR 366

Query: 711 VANIRKRMKERNLI 724
              + K MKE++++
Sbjct: 367 GFEVFKEMKEKDIV 380



 Score = 50.1 bits (118), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 65/313 (20%), Positives = 122/313 (38%), Gaps = 54/313 (17%)

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           +L+S AS+   +   +Q+H  +I      +  + N L+           +F +F   +  
Sbjct: 18  TLISVASTFNHL---KQVHVSLIHHHLHHDTFLVNLLLKRTLFFRQTHYSFLLFSHTQFP 74

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS-----------H 602
           N+  + ++I GF  +      L++F  +   G+  +G T+  VL AC+           H
Sbjct: 75  NIFLYNTLINGFVNNHLFHETLDLFLSIRKHGLNLHGFTFPLVLKACTRASNRKLGIDLH 134

Query: 603 AGLISEGWKH-------FRSMY-------DEHGIVQRMEH-----YACMVDLLGRSGSLT 643
           + ++  G+ H         S+Y       D H + + +       +  +      +G   
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKVFEEIPERSVVTWTALFSGYTTAGKHR 194

Query: 644 EALEFIR---SMPLSADVLVWRTFLGACRVHGDTELG----KHAAEMILEQDPQDPAAHI 696
           EA++  +    M +  D       L AC   GD + G    KH  EM ++   ++     
Sbjct: 195 EAIDLFKKMVEMGVRPDSYFIVQVLSACVHVGDLDSGEWIVKHMEEMEMQ---KNSFVRT 251

Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT-LEIY 755
            L NLYA  G  E   ++   M E++++  +      A N          S PK  +E +
Sbjct: 252 TLVNLYAKCGKMEKARSVFDSMGEKDIVTWSTMIQGYASN----------SFPKEGIEFF 301

Query: 756 AELDQLALKIKEF 768
            ++ Q  LK  +F
Sbjct: 302 LQMLQENLKPDQF 314


>gi|302793382|ref|XP_002978456.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
 gi|300153805|gb|EFJ20442.1| hypothetical protein SELMODRAFT_108616 [Selaginella moellendorffii]
          Length = 899

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 268/819 (32%), Positives = 447/819 (54%), Gaps = 43/819 (5%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G +++ +     M   G  PD   +S +L +C  +   + GK +H     + +E   V+
Sbjct: 105 EGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKAIHDCAVLAGME-TQVV 163

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LEL 174
            N++++LY KCG ++EA  +F+ +  +R++VSW+++I++    G   DA+ +F  M L+ 
Sbjct: 164 GNAIVNLYGKCGRVHEAKAVFERL-PERNLVSWNALIAANAQNGHCKDAMQVFHLMDLDG 222

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
              PN+  F +V+ ACSN  ++  G   +  +++ G FDS + VG +L++M+ K GSVD 
Sbjct: 223 SVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTG-FDSYLFVGNSLVNMYGKCGSVD- 280

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
             A  VF+KM+ +N V WT+MI    Q G  R A  L+  M      P+  T   V+ +C
Sbjct: 281 -RARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCE---PNAVTFMAVMDSC 336

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD--HN 351
              E     +Q+H+  + +G   D  +   LV MY KC   GSVD +  +F+ + +  +N
Sbjct: 337 LRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKC---GSVDSAWSIFENLKERSNN 393

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++W A+I+G  Q G   K+A++ F  M    V PN  T+ + L+AC +L D     Q++
Sbjct: 394 AVTWNAMISGLAQHG-ESKQALECFWKMELEGVRPNSVTYLASLEACSSLNDLTRGRQLH 452

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +      +  + N++I+MY + G +++A   F  + E+++VS+NTM+  YA++ +  
Sbjct: 453 ARILLEN-IHEANLSNAVINMYGKCGSLDEAMDEFAKMPERDVVSWNTMIATYAQHGSGR 511

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG--FESNHCIYNA 529
           +A E   +++  G  T   T+   +    S+ ++  G+ IH+ +  +    E +  +  A
Sbjct: 512 QALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALGKTIHSIVATAAPCLEQDPGVATA 571

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L++MY+RC ++  A  VF     RN+++W+++I   A+HG    AL++F +M   G KP+
Sbjct: 572 LVTMYARCGSLHDAKSVFWRSHSRNLVTWSNLIAACAQHGRENEALDLFREMQLQGTKPD 631

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T+  +++ACS  G++ +G  +F SM +++ I    +H+  MVDLLGR+G L EA + +
Sbjct: 632 ALTFSTLVAACSRRGVVKDGVFYFVSMVEDYSIPASEDHFGGMVDLLGRAGWLEEAEQVM 691

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH----ILLSNLYASA 705
           R  P +   L     LGAC VHGD E G   A+  LE D ++ A+      +L+ LY +A
Sbjct: 692 RKNPCA---LAHAVLLGACHVHGDVERGIRIAQSALELDWKNSASFAASMAMLAELYGAA 748

Query: 706 GHWEYVANIRKRMKERNLIKE-AGCSWIEADNKVHKFHVGETSH----PKTLEIYAELDQ 760
           G WE  A +RK ++ RN  +E  G SWIE  N+VH+F  GE       P+  +I  EL +
Sbjct: 749 GRWEDAARVRKAVESRNARREPGGRSWIEVKNRVHEF--GEDDDRLQGPRLDKIRGELQR 806

Query: 761 L-ALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           L +L ++E G   D N   H L           HSEK+A+ FG++ST   + IR+ KNLR
Sbjct: 807 LSSLAVEEGGICKDENARAHILG--------CCHSEKVAIGFGIVSTPAGQLIRIVKNLR 858

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIK-DGKCSC 857
            C DCH   K++S    REI +RD    H  + +G CSC
Sbjct: 859 ACHDCHAFAKFVSRRIQREISVRDPYGLHCFQTNGSCSC 897



 Score =  296 bits (757), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 199/599 (33%), Positives = 320/599 (53%), Gaps = 23/599 (3%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+ LL+ C   ++   GKLVH  +  S    N  I N LI +Y+KCG L +A ++F+ + 
Sbjct: 29  YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLP 88

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
           N  ++ SW+++I++Y   G   + + +F +M   G  P+ + FS V+ ACS+   +  G 
Sbjct: 89  NP-NVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGK 147

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            I+   +  G  ++ V VG A+++++ K    +  A  VF+++ E+N V W  +I    Q
Sbjct: 148 AIHDCAVLAG-METQV-VGNAIVNLYGKCG-RVHEAKAVFERLPERNLVSWNALIAANAQ 204

Query: 261 LGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
            G  +DA+++F  M L G + P+  T   VV ACS L     GK  H   IRTG    + 
Sbjct: 205 NGHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLF 264

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           VG SLV+MY KC   GSVD +R VF++M   NV+SWT +I  Y Q  G  + A  L+  M
Sbjct: 265 VGNSLVNMYGKC---GSVDRARLVFEKMSSRNVVSWTVMIWAYAQQ-GFIRAAFDLYKRM 320

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
                 PN  TF +V+ +C    D   AEQ++ H V  G   D  +   L++MY + G +
Sbjct: 321 ---DCEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSV 377

Query: 440 EDARKAFESLFEK--NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           + A   FE+L E+  N V++N M+   A++  S++A E   ++E  GV  ++ T+ + L 
Sbjct: 378 DSAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLE 437

Query: 498 GASSIGAIGKGEQIHARIIKSGF-ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
             SS+  + +G Q+HARI+     E+N  + NA+I+MY +C +++ A   F +M +R+V+
Sbjct: 438 ACSSLNDLTRGRQLHARILLENIHEAN--LSNAVINMYGKCGSLDEAMDEFAKMPERDVV 495

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           SW +MI  +A+HG   +ALE F +M  +G   +  TY+  + AC     ++ G K   S+
Sbjct: 496 SWNTMIATYAQHGSGRQALEFFKQMDLEGWTTDRATYLGAIDACGSVPSLALG-KTIHSI 554

Query: 617 YDEHG--IVQRMEHYACMVDLLGRSGSLTEALE-FIRSMPLSADVLVWRTFLGACRVHG 672
                  + Q       +V +  R GSL +A   F RS   S +++ W   + AC  HG
Sbjct: 555 VATAAPCLEQDPGVATALVTMYARCGSLHDAKSVFWRSH--SRNLVTWSNLIAACAQHG 611



 Score =  275 bits (703), Expect = 8e-71,   Method: Compositional matrix adjust.
 Identities = 164/510 (32%), Positives = 283/510 (55%), Gaps = 21/510 (4%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
           ++++++ C+  ++ A G +++  +L  G    +  +   LI M+ K    LE A +VF+ 
Sbjct: 29  YASLLQKCTEQKSAAAGKLVHQHILSSG-CGVNRYIQNHLIFMYAKCGC-LEDALEVFEL 86

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           +   N   WT +IT   + G  R+ + LF  M L G  PD F  S V++ACS       G
Sbjct: 87  LPNPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEG 146

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           K +H  A+  G+   V VG ++V++Y KC   G V +++ VF+R+ + N++SW A+I   
Sbjct: 147 KAIHDCAVLAGMETQV-VGNAIVNLYGKC---GRVHEAKAVFERLPERNLVSWNALIAAN 202

Query: 363 VQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            Q+ G  K+A+++F  M + G V PN  TF SV+ AC NLLD    +  +   ++ G   
Sbjct: 203 AQN-GHCKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDS 261

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              VGNSL++MY + G ++ AR  FE +  +N+VS+  M+ AYA+      AF+L   ++
Sbjct: 262 YLFVGNSLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMD 321

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
                 +A TF +++        + + EQIHA ++ SGF+S+  +   L++MY +C +V+
Sbjct: 322 ---CEPNAVTFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVD 378

Query: 542 AAFQVFKEMEDR--NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           +A+ +F+ +++R  N ++W +MI+G A+HG + +ALE F+KM  +G++PN +TY+A L A
Sbjct: 379 SAWSIFENLKERSNNAVTWNAMISGLAQHGESKQALECFWKMELEGVRPNSVTYLASLEA 438

Query: 600 CSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           CS    ++ G + H R + +    +        ++++ G+ GSL EA++    MP   DV
Sbjct: 439 CSSLNDLTRGRQLHARILLEN---IHEANLSNAVINMYGKCGSLDEAMDEFAKMP-ERDV 494

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQD 688
           + W T +     HG    G+ A E   + D
Sbjct: 495 VSWNTMIATYAQHGS---GRQALEFFKQMD 521



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 91/364 (25%), Positives = 174/364 (47%), Gaps = 33/364 (9%)

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           +AS+L+ C     +   + V+ H +  G  ++  + N LI MYA+ G +EDA + FE L 
Sbjct: 29  YASLLQKCTEQKSAAAGKLVHQHILSSGCGVNRYIQNHLIFMYAKCGCLEDALEVFELLP 88

Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
             N+ S+  ++ AYAK  +  +   L  +++  G    A+ F+++L+  SS GA+ +G+ 
Sbjct: 89  NPNVFSWTALITAYAKEGHLREVLGLFRKMQLDGTKPDAFVFSTVLTACSSAGALNEGKA 148

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
           IH   + +G E+   + NA++++Y +C  V  A  VF+ + +RN++SW ++I   A++G 
Sbjct: 149 IHDCAVLAGMET-QVVGNAIVNLYGKCGRVHEAKAVFERLPERNLVSWNALIAANAQNGH 207

Query: 571 AARALEIFYKMLADG-IKPNGITYIAVLSACS-----------HAGLISEGWKHFR---- 614
              A+++F+ M  DG ++PN  T+++V+ ACS           H  +I  G+  +     
Sbjct: 208 CKDAMQVFHLMDLDGSVRPNDATFVSVVDACSNLLDLPRGKSTHERIIRTGFDSYLFVGN 267

Query: 615 ---SMYDEHGIVQRME------------HYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
              +MY + G V R               +  M+    + G +  A +  + M    + +
Sbjct: 268 SLVNMYGKCGSVDRARLVFEKMSSRNVVSWTVMIWAYAQQGFIRAAFDLYKRMDCEPNAV 327

Query: 660 VWRTFLGACRVHGDTELGKHA-AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
            +   + +C    D    +   A M+      D    + L  +Y   G  +   +I + +
Sbjct: 328 TFMAVMDSCLRPEDLPRAEQIHAHMVASGFDSDAVLQVCLVTMYGKCGSVDSAWSIFENL 387

Query: 719 KERN 722
           KER+
Sbjct: 388 KERS 391


>gi|218184628|gb|EEC67055.1| hypothetical protein OsI_33800 [Oryza sativa Indica Group]
          Length = 513

 Score =  432 bits (1111), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 209/515 (40%), Positives = 329/515 (63%), Gaps = 2/515 (0%)

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   ++ SWT++I GY Q+   D EA+ L   M++G+  PN FTFAS+LKA G    S +
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPD-EALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGI 59

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
            EQ++   VK     D  VG++L+ MYAR GRM+ A   F+ L  KN VS+N ++  +A+
Sbjct: 60  GEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAVFDQLESKNGVSWNALIAGFAR 119

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
             + E    +  E++  G   + +T++S+ S  + IGA+ +G+ +HA +IKSG   +  +
Sbjct: 120 KGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFV 179

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
            N ++ MY++  ++  A +VF  ++ +++++W SM+T FA++G    A+  F +M   G+
Sbjct: 180 GNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMRKCGV 239

Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
             N IT++++L+ACSH GL+ EG K +  M  EH +   ++HY  +VDLLGR+G L +AL
Sbjct: 240 HLNQITFLSILTACSHGGLVKEG-KQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLNDAL 298

Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
            FI  MP+     VW   LG+CR+H + ++G+ AA+ + E DP D    +LL N+YAS G
Sbjct: 299 VFIFKMPMKPTAAVWGALLGSCRMHKNAKIGQFAADHVFELDPDDTGPPVLLYNIYASTG 358

Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            W+  A +RK MK   + KE  CSW+E +N VH F   + +HP++ EIY + ++++++I+
Sbjct: 359 QWDAAARVRKMMKATGVKKEPACSWVEIENSVHMFVANDDTHPRSEEIYKKWEEISIQIR 418

Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
           + GY+P+T++VL  ++E+++   L  HSEKIA+AF LI+      IR+ KN+R+CGDCH+
Sbjct: 419 KAGYVPNTDYVLLHVDEQERQAKLQYHSEKIALAFALINMPLGATIRIMKNIRICGDCHS 478

Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           A +YIS V  REIV+RD+NRFHH   G CSC DYW
Sbjct: 479 AFRYISKVFEREIVVRDTNRFHHFSSGSCSCGDYW 513



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/322 (29%), Positives = 164/322 (50%), Gaps = 7/322 (2%)

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           M+ ++   WT +I    Q   P +A+ L L M+   F P+ FT + ++ A         G
Sbjct: 1   MSTRDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIG 60

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+  ++     DV VG +L+DMYA+C   G +D +  VFD++   N +SW A+I G+
Sbjct: 61  EQIHALTVKYDWHDDVYVGSALLDMYARC---GRMDMAIAVFDQLESKNGVSWNALIAGF 117

Query: 363 VQSGGRDKEAVKL-FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
            + G  D E   L F++M +      HFT++SV  A   +      + V+ H +K G  L
Sbjct: 118 ARKG--DGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERL 175

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
              VGN+++ MYA+SG M DARK F+ + +K+LV++N+M+ A+A+     +A     E+ 
Sbjct: 176 SAFVGNTILDMYAKSGSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGREAVTHFEEMR 235

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             GV  +  TF S+L+  S  G + +G+Q    + +   E     Y  ++ +  R   + 
Sbjct: 236 KCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLEPEIDHYVTVVDLLGRAGLLN 295

Query: 542 AAFQ-VFKEMEDRNVISWTSMI 562
            A   +FK         W +++
Sbjct: 296 DALVFIFKMPMKPTAAVWGALL 317



 Score =  143 bits (361), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 90/258 (34%), Positives = 145/258 (56%), Gaps = 10/258 (3%)

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
           RD+ SW+S+I+ Y       +A+ + + ML   F PN + F+++++A   + +  IG  I
Sbjct: 4   RDMCSWTSLIAGYAQNDMPDEALGLLLGMLRGRFKPNGFTFASLLKAAGASASSGIGEQI 63

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           +   +K  + D DV VG AL+DM+ + G +D+  A  VFD++  KN V W  +I    + 
Sbjct: 64  HALTVKYDWHD-DVYVGSALLDMYARCGRMDM--AIAVFDQLESKNGVSWNALIAGFARK 120

Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           G     + +F +M  +GF    FT S V SA + +     GK +H+  I++G  L   VG
Sbjct: 121 GDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGALEQGKWVHAHMIKSGERLSAFVG 180

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-GRDKEAVKLFSDMI 380
            +++DMYAK    GS+ D+RKVFD +   ++++W +++T + Q G GR  EAV  F +M 
Sbjct: 181 NTILDMYAKS---GSMIDARKVFDHVDKKDLVTWNSMLTAFAQYGLGR--EAVTHFEEMR 235

Query: 381 QGQVAPNHFTFASVLKAC 398
           +  V  N  TF S+L AC
Sbjct: 236 KCGVHLNQITFLSILTAC 253



 Score =  107 bits (267), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/313 (25%), Positives = 151/313 (48%), Gaps = 16/313 (5%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T++ LLK+   S +  +G+ +H+L  +     +  + ++L+ +Y++CG ++ A  +
Sbjct: 39  PNGFTFASLLKAAGASASSGIGEQIHALTVKYDWHDDVYVGSALLDMYARCGRMDMAIAV 98

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  + +K   VSW+++I+ +  +G     + MF EM   GF    + +S+V  A +    
Sbjct: 99  FDQLESKNG-VSWNALIAGFARKGDGETTLLMFAEMQRNGFEATHFTYSSVFSAIAGIGA 157

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++  ++K G   S   VG  ++DM+ K S  +  A KVFD + +K+ V W  M+
Sbjct: 158 LEQGKWVHAHMIKSGERLS-AFVGNTILDMYAK-SGSMIDARKVFDHVDKKDLVTWNSML 215

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           T   Q G  R+A+  F +M   G   ++ T   +++ACS   L   GKQ         L 
Sbjct: 216 TAFAQYGLGREAVTHFEEMRKCGVHLNQITFLSILTACSHGGLVKEGKQYFDMMKEHNLE 275

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            ++    ++VD+  +    G ++D+     +M     M  TA + G +    R  +  K+
Sbjct: 276 PEIDHYVTVVDLLGRA---GLLNDALVFIFKM----PMKPTAAVWGALLGSCRMHKNAKI 328

Query: 376 FSDMIQGQVAPNH 388
                 GQ A +H
Sbjct: 329 ------GQFAADH 335


>gi|449475532|ref|XP_004154482.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 642

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 344/609 (56%), Gaps = 52/609 (8%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQLH+  I+TG   D      ++   A  + D  +D +R VF +M + N   W  I+   
Sbjct: 36  KQLHAIFIKTGQIQDPLTAAEVIKFCAFSSRD--IDYARAVFRQMPEPNCFCWNTILRIL 93

Query: 363 VQSGGR--DKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            ++       EA+ LFS M+  G+V PN FTF SVLKAC         +Q++   VK G 
Sbjct: 94  AETNDEHLQSEALMLFSAMLCDGRVKPNRFTFPSVLKACARASRLREGKQIHGLIVKFGF 153

Query: 420 ALDDCVGNSLISMYARSGRMEDA------------------------------------- 442
             D+ V ++L+ MY     MEDA                                     
Sbjct: 154 HEDEFVISNLVRMYVMCAVMEDAYSLFCKNVVDFDGSCQMELDKRKQDGNVVLWNIMIDG 213

Query: 443 ----------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
                     +  F+ +  +++VS+N M+  YA+N +  +A  L  E++ + +  +  T 
Sbjct: 214 QVRLGDIKSAKNLFDEMPPRSVVSWNVMISGYAQNGHFIEAINLFQEMQSSNIDPNYVTL 273

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S+L   + IGA+  G+ IH    K+  E +  + +AL+ MYS+C +++ A QVF+ +  
Sbjct: 274 VSVLPAIARIGALELGKWIHLYAGKNKVEIDDVLGSALVDMYSKCGSIDKALQVFETLPK 333

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           RN I+W+++I  FA HG A  A+  F+ M   G+ PN + YI +LSACSHAGL+ EG   
Sbjct: 334 RNAITWSAIIGAFAMHGRAEDAIIHFHLMGKAGVTPNDVAYIGILSACSHAGLVEEGRSF 393

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F  M    G+  R+EHY CMVDLLGR+G L EA E IR+MP+  D ++W+  LGAC++H 
Sbjct: 394 FSHMVKVVGLQPRIEHYGCMVDLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHK 453

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           + ++G+  AE ++E  P D  +++ LSNLYAS G+WE VA +R +MK  ++ K+ GCSWI
Sbjct: 454 NLKMGERVAETLMELAPHDSGSYVALSNLYASLGNWEAVARVRLKMKGMDIRKDPGCSWI 513

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
           E    +H+F V + SH K  EI A L ++++K++  GY P+T  V    +E+++ + L  
Sbjct: 514 EIHGIIHEFLVEDDSHSKAKEIQAMLGEMSMKLRSNGYRPNTLEVFLNTDEQERARALQY 573

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSEKIAVAFGLIST+   P+++ KNLR+C DCH ++K IS++  R+I++RD  RFH  + 
Sbjct: 574 HSEKIAVAFGLISTAPQHPLKIVKNLRICEDCHASLKLISLIYKRQIIVRDRKRFHQFEH 633

Query: 853 GKCSCNDYW 861
           G CSC DYW
Sbjct: 634 GSCSCMDYW 642



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 189/421 (44%), Gaps = 73/421 (17%)

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK---QVDAIHMFVEMLELGFC-PNEYCF 183
           D++ A  +F+ M    +   W++++           Q +A+ +F  ML  G   PN + F
Sbjct: 67  DIDYARAVFRQMPEP-NCFCWNTILRILAETNDEHLQSEALMLFSAMLCDGRVKPNRFTF 125

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG--------CALID----MFVKGSV 231
            +V++AC+    +  G  I+G ++K G+ + +  +         CA+++    +F K  V
Sbjct: 126 PSVLKACARASRLREGKQIHGLIVKFGFHEDEFVISNLVRMYVMCAVMEDAYSLFCKNVV 185

Query: 232 D---------------------------------LESAYKVFDKMTEKNTVGWTLMITRC 258
           D                                 ++SA  +FD+M  ++ V W +MI+  
Sbjct: 186 DFDGSCQMELDKRKQDGNVVLWNIMIDGQVRLGDIKSAKNLFDEMPPRSVVSWNVMISGY 245

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q G   +AI LF +M  S   P+  TL  V+ A + +     GK +H +A +  + +D 
Sbjct: 246 AQNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDD 305

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
            +G +LVDMY+KC   GS+D + +VF+ +   N ++W+AII  +    GR ++A+  F  
Sbjct: 306 VLGSALVDMYSKC---GSIDKALQVFETLPKRNAITWSAIIGAFAMH-GRAEDAIIHFHL 361

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG--------NSLI 430
           M +  V PN   +  +L AC +          ++H VK        VG          ++
Sbjct: 362 MGKAGVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVK-------VVGLQPRIEHYGCMV 414

Query: 431 SMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN-SEKAFELLHEIEDTGVG 486
            +  R+G +E+A +   ++  E + V +  ++ A    KNL   E+  E L E+     G
Sbjct: 415 DLLGRAGHLEEAEELIRNMPIEPDDVIWKALLGACKMHKNLKMGERVAETLMELAPHDSG 474

Query: 487 T 487
           +
Sbjct: 475 S 475



 Score = 81.6 bits (200), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 102/205 (49%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +AI     M      P+  T   +L +  R     LGK +H    ++K+E + V
Sbjct: 247 QNGHFIEAINLFQEMQSSNIDPNYVTLVSVLPAIARIGALELGKWIHLYAGKNKVEIDDV 306

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKCG +++A ++F+++  KR+ ++WS++I ++   G+  DAI  F  M + 
Sbjct: 307 LGSALVDMYSKCGSIDKALQVFETLP-KRNAITWSAIIGAFAMHGRAEDAIIHFHLMGKA 365

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN+  +  ++ ACS+   V  G   +  ++K       +     ++D+  +    LE
Sbjct: 366 GVTPNDVAYIGILSACSHAGLVEEGRSFFSHMVKVVGLQPRIEHYGCMVDLLGRAG-HLE 424

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRC 258
            A ++   M  E + V W  ++  C
Sbjct: 425 EAEELIRNMPIEPDDVIWKALLGAC 449


>gi|108863919|gb|ABG22332.1| vegetative storage protein, putative [Oryza sativa Japonica Group]
          Length = 645

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/582 (37%), Positives = 339/582 (58%), Gaps = 5/582 (0%)

Query: 281 PDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           P   T+   + + S L     +G+QLH+ +++     +  V  SL+ +YAKC   G +  
Sbjct: 68  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC---GLLHR 124

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +++VFD M   + + WTA+IT Y+ +G   +EAV +  +     + P+ FT   VL AC 
Sbjct: 125 AQRVFDEMPHPSTVPWTALITAYMDAGDL-REAVHVARNAFANGMRPDSFTAVRVLTACA 183

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
            + D    E V+  A + G A    V  + + +Y + G M  AR+ F+ +  K+ V++  
Sbjct: 184 RIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGA 243

Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
           MV  YA N +  +A +L   ++  G+    Y  A  LS  + +GA+  G Q    +    
Sbjct: 244 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 303

Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
           F  N  +  ALI MY++C +   A+ VF++M  +++I W +MI G    G    A  +  
Sbjct: 304 FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 363

Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           +M   G+K N  T+I +L +C+H GLI +G ++F +M   + I  R+EHY CMVDLL R+
Sbjct: 364 QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 423

Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
           G L EA + +  MP+ A+ ++    LG C++H +TEL +H  + ++  +P +   +++LS
Sbjct: 424 GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 483

Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
           N+Y++ G WE  A +R  MK + + K   CSW+E + KVH+F VG+ SHP + +IY +LD
Sbjct: 484 NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 543

Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
           +L L++K  GY P T  V+ ++E+E+K   L  HSEK+A+AF L+ T   + IRV KNLR
Sbjct: 544 ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLR 603

Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           VC DCHTAIK +S +T REI++RD+NRFH  +DG CSCNDYW
Sbjct: 604 VCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 645



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 223/485 (45%), Gaps = 48/485 (9%)

Query: 75  HPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           +P   T  + LKS  R       G+ +H+   +     N  +L SL+SLY+KCG L+ A 
Sbjct: 67  NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 126

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F  M +    V W+++I++Y++ G   +A+H+       G  P+ +    V+ AC+  
Sbjct: 127 RVFDEMPHP-STVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 185

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            ++A G  ++    + G   S V V  A +D++VK   ++  A +VFDKM  K+ V W  
Sbjct: 186 ADLATGETVWRAAEQEGVAQS-VFVATAAVDLYVKCG-EMAKAREVFDKMRHKDAVAWGA 243

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           M+      G PR+A+ LFL M   G  PD + ++G +SAC+ L     G+Q         
Sbjct: 244 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 303

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              +  +G +L+DMYAKC   GS  ++  VF +M   +++ W A+I G   + G +K A 
Sbjct: 304 FLDNPVLGTALIDMYAKC---GSTVEAWVVFQQMRKKDIIVWNAMILGLGMT-GHEKIAF 359

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            L   M +  V  N  TF  +L +C            +T  ++ GR       +++  +Y
Sbjct: 360 ALVGQMEKSGVKLNDNTFIGLLCSC-----------THTGLIQDGRR----YFHNMTKLY 404

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
             S R+E                Y  MVD  ++    ++A +L   ++D  +  +A    
Sbjct: 405 HISPRIE---------------HYGCMVDLLSRAGLLQEAHQL---VDDMPMPANAVILG 446

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           +LL G      I +  ++   ++K        N   Y  L ++YS     E A ++  +M
Sbjct: 447 ALLGGCK----IHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDM 502

Query: 551 EDRNV 555
           + + V
Sbjct: 503 KAKGV 507



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 4/268 (1%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           +  P+T  P +  +  +++ G +++A+         G  PD  T   +L +C R  +   
Sbjct: 132 MPHPSTV-PWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLAT 190

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ V     +  +  +  +  + + LY KCG++ +A ++F  M +K D V+W +M+  Y 
Sbjct: 191 GETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMVGGYA 249

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G   +A+ +F+ M   G  P+ Y  +  + AC+    + +G      +    + D+ V
Sbjct: 250 SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 309

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +G ALIDM+ K    +E A+ VF +M +K+ + W  MI      G  + A  L   M  
Sbjct: 310 -LGTALIDMYAKCGSTVE-AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 367

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQ 304
           SG   +  T  G++ +C+   L   G++
Sbjct: 368 SGVKLNDNTFIGLLCSCTHTGLIQDGRR 395



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 4/190 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G  ++A+     M  +G  PD    +  L +C R     LG+    ++   +   N V
Sbjct: 250 SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 309

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +LI +Y+KCG   EA  +F+ M  K+DI+ W++MI      G +  A  +  +M + 
Sbjct: 310 LGTALIDMYAKCGSTVEAWVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKS 368

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV-CVGCALIDMFVKGSVDL 233
           G   N+  F  ++ +C++T  +  G   +  + K  +    +   GC ++D+  +  + L
Sbjct: 369 GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC-MVDLLSRAGL-L 426

Query: 234 ESAYKVFDKM 243
           + A+++ D M
Sbjct: 427 QEAHQLVDDM 436


>gi|449526834|ref|XP_004170418.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g48910-like [Cucumis sativus]
          Length = 666

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 225/661 (34%), Positives = 376/661 (56%), Gaps = 47/661 (7%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++  +L+ G+F  D  V  AL+  +      + + A KVF  +   N   W ++I  C +
Sbjct: 52  LHALVLRSGHF-QDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                 AI  +  M++    P++FT   +  ACS  +    G+Q+H   ++ G+  DV +
Sbjct: 111 NNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             + + MYA     G ++D+RK+F    + +V+ W  +I GY++ G              
Sbjct: 170 KSAGIQMYASF---GRLEDARKMFYSG-ESDVVCWNTMIDGYLKCG-------------- 211

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
                        VL+A   L      + + +              N +I+  A+ G + 
Sbjct: 212 -------------VLEAAKGLFAQMPVKNIGSW-------------NVMINGLAKGGNLG 245

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           DARK F+ + E++ +S+++MVD Y      ++A E+  +++        +  +S+L+  S
Sbjct: 246 DARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREETRPGRFILSSVLAACS 305

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           +IGAI +G  +HA + ++  + +  +  AL+ MY++C  ++  ++VF+EM++R + +W +
Sbjct: 306 NIGAIDQGRWVHAYLKRNSIKLDAVLGTALLDMYAKCGRLDMGWEVFEEMKEREIFTWNA 365

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           MI G A HG A  ALE+F K+    +KPNGIT + VL+AC+HAG + +G + F++M + +
Sbjct: 366 MIGGLAIHGRAEDALELFSKLQEGRMKPNGITLVGVLTACAHAGFVDKGLRIFQTMREFY 425

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           G+   +EHY CMVDLLGRSG  +EA + I SMP+  +  VW   LGACR+HG+ +L +  
Sbjct: 426 GVDPELEHYGCMVDLLGRSGLFSEAEDLINSMPMKPNAAVWGALLGACRIHGNFDLAERV 485

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
            +++LE +PQ+   ++LLSN+YA  G ++ V+ IRK MK R +    G S ++ +  VH+
Sbjct: 486 GKILLELEPQNSGRYVLLSNIYAKVGRFDDVSKIRKLMKNRGIKTVPGVSIVDLNGTVHE 545

Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
           F +G+ SHP+  EIY +L  +  +++  G+ PDT+ VL +++EE+K   +  HSEK+A+A
Sbjct: 546 FKMGDGSHPQMKEIYRKLKIIKERLQMAGHSPDTSQVLFDIDEEEKETAVNYHSEKLAIA 605

Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           FGLI+T   K I + KNLRVC DCH+A K IS +  REI++RD  R+HH K+G CSC D+
Sbjct: 606 FGLINTLPGKRIHIVKNLRVCDDCHSATKLISQIFDREIIVRDRVRYHHFKNGTCSCKDF 665

Query: 861 W 861
           W
Sbjct: 666 W 666



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 179/378 (47%), Gaps = 54/378 (14%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIYH------LNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
           P  S+  F  +  +S P  N  I++      L + ++ KAI+    M      P+  TY 
Sbjct: 78  PHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYP 136

Query: 83  LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
            L K+C  ++    G+ +H  + +  +  +  I ++ I +Y+  G L +A K+F S   +
Sbjct: 137 TLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYS--GE 194

Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
            D+V W++MI  Y+  G    A  +F +M                      +N+   +++
Sbjct: 195 SDVVCWNTMIDGYLKCGVLEAAKGLFAQM--------------------PVKNIGSWNVM 234

Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
              L K G                     +L  A K+FD+M+E++ + W+ M+      G
Sbjct: 235 INGLAKGG---------------------NLGDARKLFDEMSERDEISWSSMVDGYISAG 273

Query: 263 CPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
             ++A+ +F  M      P RF LS V++ACS +     G+ +H++  R  + LD  +G 
Sbjct: 274 RYKEALEIFQQMQREETRPGRFILSSVLAACSNIGAIDQGRWVHAYLKRNSIKLDAVLGT 333

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           +L+DMYAKC   G +D   +VF+ M +  + +W A+I G +   GR ++A++LFS + +G
Sbjct: 334 ALLDMYAKC---GRLDMGWEVFEEMKEREIFTWNAMIGG-LAIHGRAEDALELFSKLQEG 389

Query: 383 QVAPNHFTFASVLKACGN 400
           ++ PN  T   VL AC +
Sbjct: 390 RMKPNGITLVGVLTACAH 407



 Score = 80.5 bits (197), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 81/363 (22%), Positives = 136/363 (37%), Gaps = 73/363 (20%)

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARS--GRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
           Q++   ++ G   D  V  +L+  YA       + A K F S+   N+  +N ++    +
Sbjct: 51  QLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNPNVFIWNIVIKGCLE 110

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF------ 520
           N    KA      +       + +T+ +L    S   A+ +G QIH  ++K G       
Sbjct: 111 NNKLFKAIYFYGRMV-IDARPNKFTYPTLFKACSVAQAVQEGRQIHGHVVKHGIGSDVHI 169

Query: 521 ------------------------ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV- 555
                                   ES+   +N +I  Y +C  +EAA  +F +M  +N+ 
Sbjct: 170 KSAGIQMYASFGRLEDARKMFYSGESDVVCWNTMIDGYLKCGVLEAAKGLFAQMPVKNIG 229

Query: 556 ------------------------------ISWTSMITGFAKHGFAARALEIFYKMLADG 585
                                         ISW+SM+ G+   G    ALEIF +M  + 
Sbjct: 230 SWNVMINGLAKGGNLGDARKLFDEMSERDEISWSSMVDGYISAGRYKEALEIFQQMQREE 289

Query: 586 IKPNGITYIAVLSACSHAGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTE 644
            +P      +VL+ACS+ G I +G W H  +    + I         ++D+  + G L  
Sbjct: 290 TRPGRFILSSVLAACSNIGAIDQGRWVH--AYLKRNSIKLDAVLGTALLDMYAKCGRLDM 347

Query: 645 ALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI--LEQDPQDPAAHILLSNLY 702
             E    M    ++  W   +G   +HG  E    A E+   L++    P    L+  L 
Sbjct: 348 GWEVFEEMK-EREIFTWNAMIGGLAIHGRAE---DALELFSKLQEGRMKPNGITLVGVLT 403

Query: 703 ASA 705
           A A
Sbjct: 404 ACA 406



 Score = 66.2 bits (160), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 20/268 (7%)

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS--RCANVEAAFQVFKEMEDR 553
           L  + SI ++    Q+HA +++SG   +H +  AL+  Y+    +N + A +VF  + + 
Sbjct: 37  LFDSKSITSLQYLTQLHALVLRSGHFQDHYVSGALLKCYANPHFSNFDFALKVFSSIPNP 96

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           NV  W  +I G  ++    +A+  + +M+ D  +PN  TY  +  ACS A  + EG +  
Sbjct: 97  NVFIWNIVIKGCLENNKLFKAIYFYGRMVIDA-RPNKFTYPTLFKACSVAQAVQEG-RQI 154

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
                +HGI   +   +  + +    G L +A +   S    +DV+ W T +      G 
Sbjct: 155 HGHVVKHGIGSDVHIKSAGIQMYASFGRLEDARKMFYSG--ESDVVCWNTMIDGYLKCGV 212

Query: 674 TELGKHAAEMILEQDP-QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
            E    AA+ +  Q P ++  +  ++ N  A  G+      +   M ER+ I     SW 
Sbjct: 213 LE----AAKGLFAQMPVKNIGSWNVMINGLAKGGNLGDARKLFDEMSERDEI-----SW- 262

Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQ 760
              + +   ++    + + LEI+ ++ +
Sbjct: 263 ---SSMVDGYISAGRYKEALEIFQQMQR 287


>gi|224137994|ref|XP_002322703.1| predicted protein [Populus trichocarpa]
 gi|222867333|gb|EEF04464.1| predicted protein [Populus trichocarpa]
          Length = 627

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 219/560 (39%), Positives = 343/560 (61%), Gaps = 5/560 (0%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+Q+H+  I++GL +   V   L++ Y+K  +      S +VF+     +  +W+++I+ 
Sbjct: 73  GQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLL---SSQVFEESERKSSTTWSSVISS 129

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q+      A++ F  MI   + P+   F S  KAC  L   +V + V+   +K G  +
Sbjct: 130 FAQNE-EPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDV 188

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           D  VG+SL+ MYA+ G +++AR  F+ +  +N+VS++ M+  Y +    E+A  L  E  
Sbjct: 189 DVFVGSSLVDMYAKCGDIKEARNVFDEMPHRNVVSWSGMIYGYTQLGEHEEAMRLFKEAL 248

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             G+  + +T +S++    S   +  G+QIH    K+ ++ +  + ++LIS+YS+C  +E
Sbjct: 249 LEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSSLISLYSKCGLIE 308

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A++VF E+  +N+  W +M+   A+H     A ++F KM   G++PN IT++ VL ACS
Sbjct: 309 GAYRVFDEVPIKNLGMWNAMLIACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACS 368

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGL+ EG K+F ++  ++ I    +HYA MVDLLGR+G L EAL  I+ MP      VW
Sbjct: 369 HAGLVEEGKKYF-ALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVW 427

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
             F+  CR+HG+T+L   AA+ + E        H++LSN YA+AG +E  A  RK +++R
Sbjct: 428 GAFITGCRIHGNTDLAAFAADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKMLRDR 487

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            + KE G SWIE  N+VHKF  G+  H +  EIY +L+ L  +++  GY+ DT+FVL E+
Sbjct: 488 GVKKETGLSWIEEGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVADTSFVLREV 547

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
             E+K Q +  HSE++A+AFGLIS    +PIR+ KNLRVCGDCH AIK+IS ++GR I++
Sbjct: 548 GSEEKNQTIRYHSERLAIAFGLISIPLGRPIRIMKNLRVCGDCHNAIKFISKLSGRVIIV 607

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFH  +DGKCSC DYW
Sbjct: 608 RDNNRFHRFEDGKCSCADYW 627



 Score =  185 bits (470), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 149/529 (28%), Positives = 241/529 (45%), Gaps = 67/529 (12%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL S  RSR+   G+ +H+ + +S L+   ++ + LI+ YSK      ++++F+    ++
Sbjct: 60  LLLSQTRSRSLLKGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEE-SERK 118

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
              +WSS+ISS+    + V AI  F  M+    CP+++ F +  +AC+      +G  ++
Sbjct: 119 SSTTWSSVISSFAQNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVGKSVH 178

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             ++K GY D DV VG +L+DM+ K   D++ A  VFD+M  +N V W+ MI   TQLG 
Sbjct: 179 CLVIKTGY-DVDVFVGSSLVDMYAKCG-DIKEARNVFDEMPHRNVVSWSGMIYGYTQLGE 236

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+RLF + +L G   + FTLS V+  C    L   GKQ+H    +T   L   VG S
Sbjct: 237 HEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATLLELGKQIHGLCFKTSYDLSGFVGSS 296

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+ +Y+KC   G ++ + +VFD +   N+  W A++    Q     KEA  LF+ M    
Sbjct: 297 LISLYSKC---GLIEGAYRVFDEVPIKNLGMWNAMLIACAQH-AHTKEAFDLFTKMENAG 352

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           + PN  TF  VL AC             +HA                      G +E+ +
Sbjct: 353 MRPNFITFLCVLYAC-------------SHA----------------------GLVEEGK 377

Query: 444 KAFESL----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI--EDTGVGTSAYTFASLLS 497
           K F  +     E     Y +MVD   +    ++A  ++  +  E T     A+     + 
Sbjct: 378 KYFALMKKYEIEPGTQHYASMVDLLGRAGKLQEALSVIKGMPTEPTESVWGAFITGCRIH 437

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV-- 555
           G + + A    +      + SG      ++  L + Y+     E A +  K + DR V  
Sbjct: 438 GNTDLAAFAADKVFELGAVSSG------LHVMLSNAYAAAGRYEDAAKARKMLRDRGVKK 491

Query: 556 ---ISWTSMITGFAKHGFAA------RALEIFYKMLADGIKPNGITYIA 595
              +SW     G   H FAA      R  EI+ K+   G +     Y+A
Sbjct: 492 ETGLSWIE--EGNRVHKFAAGDRFHVRMKEIYQKLEDLGEEMERAGYVA 538



 Score =  137 bits (345), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 99/337 (29%), Positives = 158/337 (46%), Gaps = 8/337 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD   +    K+C       +GK VH L+ ++  + +  + +SL+ +Y+KCGD+ EA  +
Sbjct: 153 PDDHIFPSATKACAILGRCDVGKSVHCLVIKTGYDVDVFVGSSLVDMYAKCGDIKEARNV 212

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M + R++VSWS MI  Y   G+  +A+ +F E L  G   N++  S+VIR C +   
Sbjct: 213 FDEMPH-RNVVSWSGMIYGYTQLGEHEEAMRLFKEALLEGLDVNDFTLSSVIRVCGSATL 271

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           + +G  I+G   K  Y D    VG +LI ++ K  + +E AY+VFD++  KN   W  M+
Sbjct: 272 LELGKQIHGLCFKTSY-DLSGFVGSSLISLYSKCGL-IEGAYRVFDEVPIKNLGMWNAML 329

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
             C Q    ++A  LF  M  +G  P+  T   V+ ACS   L   GK+  +   +  + 
Sbjct: 330 IACAQHAHTKEAFDLFTKMENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIE 389

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS-WTAIITGYVQSGGRDKEAVK 374
                  S+VD+  +    G + ++  V   M      S W A ITG    G  D  A  
Sbjct: 390 PGTQHYASMVDLLGRA---GKLQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFA 446

Query: 375 LFSDMIQGQVAPN-HFTFASVLKACGNLLDSNVAEQV 410
                  G V+   H   ++   A G   D+  A ++
Sbjct: 447 ADKVFELGAVSSGLHVMLSNAYAAAGRYEDAAKARKM 483



 Score = 74.7 bits (182), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 51/179 (28%), Positives = 91/179 (50%), Gaps = 7/179 (3%)

Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
           KG+QIHA IIKSG +    + + LI+ YS+      + QVF+E E ++  +W+S+I+ FA
Sbjct: 72  KGQQIHAHIIKSGLQVIPLVCHYLINFYSKTQLPLLSSQVFEESERKSSTTWSSVISSFA 131

Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
           ++     A++ F +M+ + + P+   + +   AC+  G    G K    +  + G    +
Sbjct: 132 QNEEPVLAIQYFCRMIGENLCPDDHIFPSATKACAILGRCDVG-KSVHCLVIKTGYDVDV 190

Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
              + +VD+  + G + EA      MP   +V+ W        ++G T+LG+H   M L
Sbjct: 191 FVGSSLVDMYAKCGDIKEARNVFDEMP-HRNVVSWSGM-----IYGYTQLGEHEEAMRL 243



 Score = 39.7 bits (91), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 26/107 (24%), Positives = 46/107 (42%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  T+  +L +C  +     GK   +L+ + ++EP +    S++ L  + G 
Sbjct: 348 MENAGMRPNFITFLCVLYACSHAGLVEEGKKYFALMKKYEIEPGTQHYASMVDLLGRAGK 407

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
           L EA  + K M  +     W + I+     G    A     ++ ELG
Sbjct: 408 LQEALSVIKGMPTEPTESVWGAFITGCRIHGNTDLAAFAADKVFELG 454


>gi|326526571|dbj|BAJ97302.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 851

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 267/803 (33%), Positives = 440/803 (54%), Gaps = 24/803 (2%)

Query: 72  KGNHPDLDTYSLLLKSC--IRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
           +G  PD  T     +SC  +R      G+ VH+L  +  L  +  + NSL+S+Y +CG +
Sbjct: 60  EGIAPDRFTLPPAARSCGFLRVGAAAAGRQVHALAAKLGLPGDPFVGNSLVSMYGRCGRV 119

Query: 130 NEANKIFKSMGNK-RDIVSWSSMISSYVNRGKQVDAIHMFVE-MLELGFCPNEYCFSAVI 187
            +A K+F  + +  R+IVSW++++++    G     + +F + ++ +G   +E     V+
Sbjct: 120 EDAEKVFGGIPDAARNIVSWNALMAAL--SGDPRRGLELFRDCLVAVGGMVDEATLVTVL 177

Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
             C+       G  ++G   K G+ D+   VG AL+DM+ K   +L  A + F +    +
Sbjct: 178 PMCAALGWSETGRAVHGLAAKSGW-DAPARVGNALVDMYAKCG-ELADAERAFPEAP--S 233

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILS--GFLP-DRFTLSGVVSACSELELFTSGKQ 304
            V W +M+   T+      A  L  DM +   G +P D  T+  V+ ACS     +  ++
Sbjct: 234 VVSWNVMLGAYTRNREAGAAFGLLRDMQIKEHGSVPADEITVLSVLPACSGPTELSRLRE 293

Query: 305 LHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           LH++ +R GL A    V  +LV  Y +C   G +  + +VF  +    V SW  +I+ + 
Sbjct: 294 LHAFTVRRGLDAASDKVPNALVAAYGRC---GRLLHADRVFTDIRRKTVSSWNTLISAHA 350

Query: 364 QSGGRDKEAVKLFSDMIQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           Q       A++LF  M     + P+ F+  S+L AC +       +  +   ++ G   D
Sbjct: 351 QQN--TAAAIELFIQMTNACGLKPDGFSIGSLLMACADPKHLLHVKATHGFILRNGLERD 408

Query: 423 DCVGNSLISMYARSGRMED-ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
             +  SL+S Y R  R E  AR  F+++ EK  V +  M+  Y++N    ++ +L  E++
Sbjct: 409 TVIRASLLSAYIRCSRTEYLARVLFDAMEEKGEVLWIAMISGYSQNGLPGESLQLFREMQ 468

Query: 482 DT-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
              G  +S  +  S L   S + ++  G+++H   +K+    +  + ++LI MYS+C  V
Sbjct: 469 SVEGHCSSVISATSALMACSELSSVRLGKEMHCFALKADLCDDPFLSSSLIDMYSKCGFV 528

Query: 541 EAAFQVFKEMEDRNV-ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           E A   F  ++ R+  +SWT+MITG+A +G    A+E++ KM  +G++P+  TY+ +L A
Sbjct: 529 EDARTFFDRLKARDAKVSWTAMITGYAVNGLGREAVELYGKMRREGMEPDEFTYLGLLMA 588

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQ-RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           C HAG++ EG + F  M + H  ++ ++EHY+C++ +L R+G   +A+  +  MP   D 
Sbjct: 589 CGHAGMLEEGLRFFDEMRNHHHKIEVKLEHYSCVIGMLSRAGRFADAVALMAEMPQEPDA 648

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
            +  + L AC +HG+ ELG   AE +LE +P     ++L SN+YA +  W+ +  +RK +
Sbjct: 649 KILSSVLSACHIHGEAELGSDVAERLLELEPDKAEHYVLASNMYAGSRRWDDMRKVRKML 708

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
           ++  + KE GCSWI+   KV+ F  GE  HP+  ++      L  +I+E GY+PDT  VL
Sbjct: 709 RDAGIAKEPGCSWIDVAGKVYSFVAGENPHPEMEQVRGMWRSLEERIREIGYVPDTTVVL 768

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           HELEEE+KV+ L+ HSEK AV FGL+ T+    +RVFKN+R+C DCH A + IS VTGR+
Sbjct: 769 HELEEEEKVEALWWHSEKQAVTFGLLRTATPATVRVFKNIRMCKDCHNAARLISKVTGRD 828

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           IV+RD  RFHH + G CSC DYW
Sbjct: 829 IVVRDKKRFHHFRGGICSCGDYW 851


>gi|116310835|emb|CAH67622.1| OSIGBa0140J09.3 [Oryza sativa Indica Group]
          Length = 1027

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 248/732 (33%), Positives = 404/732 (55%), Gaps = 11/732 (1%)

Query: 40   PTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGK 98
            PT S    N +I  H   G     +     M   G  P   T++ +L +    + F  G+
Sbjct: 286  PTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQ 345

Query: 99   LVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNR 158
             +H+      L+ N  + +SLI+LY+KCG  ++A  +F  +  +++IV W++M++ +V  
Sbjct: 346  QMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDAKNVF-DLSCEKNIVMWNAMLTGFVQN 404

Query: 159  GKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCV 218
                +AI MF  M+      +E+ F +++ AC+   +  +G  ++   +K    D  + V
Sbjct: 405  ELPEEAIRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIK-NCMDISLFV 463

Query: 219  GCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
              A +DM+ K    +  A  +F  +  K+++ W  +     Q     +A+ +   M L G
Sbjct: 464  ANATLDMYSKYGA-IGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHG 522

Query: 279  FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
              PD  + S  ++ACS +    +GKQ+H  AI+ G+  +  VG SL+D+Y+K    G V+
Sbjct: 523  ITPDDVSFSTAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSK---HGDVE 579

Query: 339  DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             SRK+F ++   +++   A+I G+VQ+   D EA++LF  +++  + P+  TF+S+L  C
Sbjct: 580  SSRKIFAQVDASSIVPINALIAGFVQNNNED-EAIQLFQQVLKDGLKPSSVTFSSILSGC 638

Query: 399  GNLLDSNVAEQVYTHAVKRGRALDDCV-GNSLISMYARSGRMEDARKAFESLFE-KNLVS 456
               L+S + +QV+ + +K G   DD + G SL  +Y +S  +EDA K    + + KNL  
Sbjct: 639  SGSLNSAIGKQVHCYTLKSGVLYDDTLLGVSLAGIYLKSKMLEDANKLLTEMPDHKNLFE 698

Query: 457  YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
            +  ++  YA+N   + +      +    V +   TFAS+L   S + A   G++IH  I 
Sbjct: 699  WTAIISGYAQNGYGDHSLVSFWRMRHCNVRSDEATFASVLKACSDVTAFADGKEIHGLIT 758

Query: 517  KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARAL 575
            KSGF S     +ALI MYS+C +V ++F+ FKE++++ +++ W SMI GFAK+G+A  AL
Sbjct: 759  KSGFGSYETATSALIDMYSKCGDVISSFEAFKELKNKQDIMPWNSMIVGFAKNGYADEAL 818

Query: 576  EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDL 635
             +F KM    IKP+ +T++ VL AC+H+GLISEG   F  M   +G+  R++HYAC +DL
Sbjct: 819  LLFQKMEELQIKPDEVTFLGVLIACTHSGLISEGRHFFGPMRKVYGLTPRLDHYACFIDL 878

Query: 636  LGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAH 695
            LGR G L EA E I  +P   D +VW T+L ACR+H D E GK AA  ++E +PQ  + +
Sbjct: 879  LGRGGHLQEAQEAIDQLPFRPDGVVWATYLAACRMHKDEERGKIAARKLVELEPQYSSTY 938

Query: 696  ILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIY 755
            +LLS+L+A+ G+W      R+ M+E+ + K  GCSWI   NK   F V +  HP  L IY
Sbjct: 939  VLLSSLHAATGNWAEAKVTRESMREKGVAKFPGCSWITVGNKTSLFLVQDKYHPDNLRIY 998

Query: 756  AELDQLALKIKE 767
              L  L   +K+
Sbjct: 999  EMLGDLTGMMKK 1010



 Score =  256 bits (655), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 148/529 (27%), Positives = 276/529 (52%), Gaps = 42/529 (7%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G  PD    +++L +C R      G+ VH  + +S    +     +L+ +Y+KCGD+  A
Sbjct: 153 GGRPDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFSSSVFCEAALVDMYAKCGDVPNA 212

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            ++F  +    D + WSSMI+ Y   G   +A+ +F  M ++G  P++     +I   ++
Sbjct: 213 RRVFDGIACP-DTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIISTLAS 271

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
           +                                       L+ A  +  KM   +TV W 
Sbjct: 272 SGR-------------------------------------LDHATALLKKMPTPSTVAWN 294

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            +I+   Q G   + + L+ DM   G  P R T + ++SA + ++ F  G+Q+H+ A+  
Sbjct: 295 AVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH 354

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           GL  +V VG SL+++YAKC   G   D++ VFD   + N++ W A++TG+VQ+    +EA
Sbjct: 355 GLDANVFVGSSLINLYAKC---GCPSDAKNVFDLSCEKNIVMWNAMLTGFVQN-ELPEEA 410

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           +++F  M++  +  + FTF S+L AC  L    + +QV+   +K    +   V N+ + M
Sbjct: 411 IRMFQYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDM 470

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y++ G + DA+  F  +  K+ +S+N +    A+NL  E+A  +L  +   G+     +F
Sbjct: 471 YSKYGAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSF 530

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           ++ ++  S+I A   G+QIH   IK G  SNH + ++LI +YS+  +VE++ ++F +++ 
Sbjct: 531 STAINACSNIRATETGKQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDA 590

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            +++   ++I GF ++     A+++F ++L DG+KP+ +T+ ++LS CS
Sbjct: 591 SSIVPINALIAGFVQNNNEDEAIQLFQQVLKDGLKPSSVTFSSILSGCS 639



 Score =  184 bits (468), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 152/603 (25%), Positives = 280/603 (46%), Gaps = 58/603 (9%)

Query: 73  GNHPDLDTYSLLL--------------KSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
           G+HPD  +Y+ LL               S  R+R+    + +H  + R        + +S
Sbjct: 37  GSHPDASSYASLLSSLSRECHARHPFDASPPRARHSQTCRALHGRILRGGSPLLGRLGDS 96

Query: 119 LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM-LELGFC 177
           L+ LY K G +  A       G +R   + SS++S +   G   D +  F  +    G  
Sbjct: 97  LVELYCKSGRVGYAWSALGYAG-ERASGAASSLLSCHARSGSPGDVLGAFRYIRCTAGGR 155

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P+++  + V+ ACS    +A G  ++  ++K G F S V    AL+DM+ K   D+ +A 
Sbjct: 156 PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSG-FSSSVFCEAALVDMYAKCG-DVPNAR 213

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           +VFD +   +T+ W+ MI    ++GC ++A+ LF  M   G  PD+ TL  ++S      
Sbjct: 214 RVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRMDKMGSAPDQVTLVTIIST----- 268

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           L +SG+                                 +D +  +  +M   + ++W A
Sbjct: 269 LASSGR---------------------------------LDHATALLKKMPTPSTVAWNA 295

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +I+G+ QS G +   + L+ DM    + P   TFAS+L A  N+      +Q++  AV  
Sbjct: 296 VISGHAQS-GLEFNVLGLYKDMRSWGLWPTRSTFASMLSAAANMKAFVEGQQMHAAAVMH 354

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
           G   +  VG+SLI++YA+ G   DA+  F+   EKN+V +N M+  + +N   E+A  + 
Sbjct: 355 GLDANVFVGSSLINLYAKCGCPSDAKNVFDLSCEKNIVMWNAMLTGFVQNELPEEAIRMF 414

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
             +    + T  +TF S+L   + + +   G+Q+H   IK+  + +  + NA + MYS+ 
Sbjct: 415 QYMMRYTLQTDEFTFVSILGACTYLSSFYLGKQVHCVTIKNCMDISLFVANATLDMYSKY 474

Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
             +  A  +F  +  ++ ISW ++  G A++     A+ +  +M   GI P+ +++   +
Sbjct: 475 GAIGDAKALFSLIPYKDSISWNALTVGLAQNLEEEEAVCMLKRMRLHGITPDDVSFSTAI 534

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
           +ACS+      G K    +  ++GI       + ++DL  + G +  + +    +  S+ 
Sbjct: 535 NACSNIRATETG-KQIHCLAIKYGICSNHAVGSSLIDLYSKHGDVESSRKIFAQVDASSI 593

Query: 658 VLV 660
           V +
Sbjct: 594 VPI 596



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 72/365 (19%), Positives = 154/365 (42%), Gaps = 44/365 (12%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           + LH   +R G  L   +G SLV++Y K    G V  +        +    + +++++ +
Sbjct: 76  RALHGRILRGGSPLLGRLGDSLVELYCK---SGRVGYAWSALGYAGERASGAASSLLSCH 132

Query: 363 VQSG--GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
            +SG  G    A +       G+  P+ F  A VL AC  +       QV+   VK G +
Sbjct: 133 ARSGSPGDVLGAFRYIRCTAGGR--PDQFGLAVVLSACSRVGVLAYGRQVHCDVVKSGFS 190

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
                  +L+ MYA+ G + +AR+ F+ +   + + +++M+  Y +    ++A  L   +
Sbjct: 191 SSVFCEAALVDMYAKCGDVPNARRVFDGIACPDTICWSSMIACYHRVGCYQEALALFSRM 250

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +  G      T  +++S  +S G                                    +
Sbjct: 251 DKMGSAPDQVTLVTIISTLASSG-----------------------------------RL 275

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  + K+M   + ++W ++I+G A+ G     L ++  M + G+ P   T+ ++LSA 
Sbjct: 276 DHATALLKKMPTPSTVAWNAVISGHAQSGLEFNVLGLYKDMRSWGLWPTRSTFASMLSAA 335

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           ++     EG +   +    HG+   +   + +++L  + G  ++A + +  +    ++++
Sbjct: 336 ANMKAFVEG-QQMHAAAVMHGLDANVFVGSSLINLYAKCGCPSDA-KNVFDLSCEKNIVM 393

Query: 661 WRTFL 665
           W   L
Sbjct: 394 WNAML 398


>gi|449435958|ref|XP_004135761.1| PREDICTED: cohesin subunit SA-1-like [Cucumis sativus]
          Length = 1866

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 238/622 (38%), Positives = 361/622 (58%), Gaps = 9/622 (1%)

Query: 222 LIDMFVK-GSVDLESAYKVFDKMTE--KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
           L++++ K GSVD      +F    +  KN V WT +IT+ T+   P  A+  F  M  SG
Sbjct: 68  LLNLYAKCGSVD--QTLLLFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSG 125

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
             P+ +T S V+SAC++      G+Q+HS   + G   +V V  +LVDMYAKC     + 
Sbjct: 126 VYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVSALVDMYAKCC---DML 182

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
            + KVF+ M   N++SW  +I G++Q+   D+      + +++   A +  +F+SV  AC
Sbjct: 183 MAEKVFEEMPVRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSAC 242

Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
            N  +    +QV+  A+K G      + NSL  MY + G   D  K F +   +++V++N
Sbjct: 243 ANAGNLEFGKQVHGVALKLGVWNLVYINNSLSDMYGKCGLFNDVAKLFSNTGARDVVTWN 302

Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
            M+ AY  N N E A      +   G      +++S+L   +++ A+ +G  IH +II+S
Sbjct: 303 IMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRS 362

Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
           GF  N  + ++LI+MY++C ++  AFQ+F+E EDRNV+ WT++I    +HG A   +E+F
Sbjct: 363 GFVKNLRVASSLITMYAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELF 422

Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
            +ML +GIKP+ IT+++VLSACSH G + EG+ +F SM   HGI    EHYAC+VDLL R
Sbjct: 423 EQMLREGIKPDYITFVSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSR 482

Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
           +G L  A  FI  MP+  D  VW   L ACR H +  +GK  A  + + +P +P  ++LL
Sbjct: 483 AGELDRAKRFIELMPIKPDASVWGALLSACRNHSNLIMGKEVALKLFDLEPDNPGNYVLL 542

Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
            N+    G       +R++M+   + KE GCSWI+  N  + F V + SH KT EIY  L
Sbjct: 543 CNILTRNGMLNEADEVRRKMESIGVRKEPGCSWIDIKNSTYVFTVHDKSHEKTKEIYEML 602

Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
           ++L   +K+ GY+ +T F ++   EE K Q L+ HSEKIA+AFGL+S     PIR+ KNL
Sbjct: 603 EKLKELVKKKGYVAETEFAINT-AEEYKEQSLWYHSEKIALAFGLLSLPAGAPIRIKKNL 661

Query: 819 RVCGDCHTAIKYISMVTGREIV 840
           R CGDCHT +K+ S +  REI+
Sbjct: 662 RTCGDCHTVMKFASEIFAREII 683



 Score =  204 bits (519), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 169/585 (28%), Positives = 272/585 (46%), Gaps = 57/585 (9%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           HP     SLL  +C  SR       +HS L  + L     + N+L++LY+KCG +++   
Sbjct: 28  HPLTSLNSLL--NC--SRTSKHATQIHSQLITTALLSLPFLFNNLLNLYAKCGSVDQTLL 83

Query: 135 IFKSM-GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           +F S   + +++VSW+S+I+      +   A+  F  M   G  PN Y FSAV+ AC++T
Sbjct: 84  LFSSAPDDSKNVVSWTSLITQLTRFKRPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDT 143

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
                G  ++  + K G+  ++V V  AL+DM+ K   D+  A KVF++M  +N V W  
Sbjct: 144 TASVHGEQMHSLVWKHGFL-AEVFVVSALVDMYAK-CCDMLMAEKVFEEMPVRNLVSWNT 201

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
           MI    Q      AI  F  ++L      D  + S V SAC+       GKQ+H  A++ 
Sbjct: 202 MIVGFLQNKLYDQAIFFFKTLLLENLTALDEVSFSSVFSACANAGNLEFGKQVHGVALKL 261

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           G+   V +  SL DMY KC   G  +D  K+F      +V++W  +I  YV +   + +A
Sbjct: 262 GVWNLVYINNSLSDMYGKC---GLFNDVAKLFSNTGARDVVTWNIMIMAYVYNHNYE-DA 317

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
              F  M +    P+  +++SVL +C NL        ++   ++ G   +  V +SLI+M
Sbjct: 318 CNSFWMMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITM 377

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YA+ G + DA + FE   ++N+V +  ++ A  ++ ++    EL  ++   G+     TF
Sbjct: 378 YAKCGSLVDAFQIFEETEDRNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITF 437

Query: 493 ASLLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME 551
            S+LS  S  G + +G      +IK  G    H  Y  ++ + SR   +           
Sbjct: 438 VSVLSACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYACIVDLLSRAGEL----------- 486

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC-SHAGLI---S 607
           DR                 A R +E+        IKP+   + A+LSAC +H+ LI    
Sbjct: 487 DR-----------------AKRFIELM------PIKPDASVWGALLSACRNHSNLIMGKE 523

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
              K F    D  G      +Y  + ++L R+G L EA E  R M
Sbjct: 524 VALKLFDLEPDNPG------NYVLLCNILTRNGMLNEADEVRRKM 562



 Score =  169 bits (427), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/398 (29%), Positives = 198/398 (49%), Gaps = 21/398 (5%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R  KA+   + M + G +P+  T+S +L +C  +     G+ +HSL+ +        +++
Sbjct: 110 RPFKALTFFNHMRRSGVYPNHYTFSAVLSACTDTTASVHGEQMHSLVWKHGFLAEVFVVS 169

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF-VEMLELGF 176
           +L+ +Y+KC D+  A K+F+ M   R++VSW++MI  ++       AI  F   +LE   
Sbjct: 170 ALVDMYAKCCDMLMAEKVFEEMP-VRNLVSWNTMIVGFLQNKLYDQAIFFFKTLLLENLT 228

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +E  FS+V  AC+N  N+  G  ++G  LK G ++  V +  +L DM+ K  +     
Sbjct: 229 ALDEVSFSSVFSACANAGNLEFGKQVHGVALKLGVWNL-VYINNSLSDMYGKCGL-FNDV 286

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            K+F     ++ V W +MI          DA   F  M   G +PD  + S V+ +C+ L
Sbjct: 287 AKLFSNTGARDVVTWNIMIMAYVYNHNYEDACNSFWMMRRKGSIPDEASYSSVLHSCANL 346

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G  +H+  IR+G   ++ V  SL+ MYAKC   GS+ D+ ++F+   D NV+ WT
Sbjct: 347 AALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKC---GSLVDAFQIFEETEDRNVVCWT 403

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE-------Q 409
           AII    Q  G     V+LF  M++  + P++ TF SVL AC +     V E        
Sbjct: 404 AIIAA-CQQHGHANWVVELFEQMLREGIKPDYITFVSVLSACSH--TGRVEEGFFYFNSM 460

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
           +  H +  G     C+    + + +R+G ++ A++  E
Sbjct: 461 IKVHGIYPGHEHYACI----VDLLSRAGELDRAKRFIE 494



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 5/193 (2%)

Query: 68  LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           +M +KG+ PD  +YS +L SC      + G L+H+ + RS    N  + +SLI++Y+KCG
Sbjct: 323 MMRRKGSIPDEASYSSVLHSCANLAALYQGTLIHNQIIRSGFVKNLRVASSLITMYAKCG 382

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
            L +A +IF+   + R++V W+++I++    G     + +F +ML  G  P+   F +V+
Sbjct: 383 SLVDAFQIFEETED-RNVVCWTAIIAACQQHGHANWVVELFEQMLREGIKPDYITFVSVL 441

Query: 188 RACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK 246
            ACS+T  V  G   +  ++K  G +       C ++D+  +   +L+ A +  + M  K
Sbjct: 442 SACSHTGRVEEGFFYFNSMIKVHGIYPGHEHYAC-IVDLLSRAG-ELDRAKRFIELMPIK 499

Query: 247 NTVG-WTLMITRC 258
                W  +++ C
Sbjct: 500 PDASVWGALLSAC 512


>gi|224136143|ref|XP_002322250.1| predicted protein [Populus trichocarpa]
 gi|222869246|gb|EEF06377.1| predicted protein [Populus trichocarpa]
          Length = 548

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 220/552 (39%), Positives = 338/552 (61%), Gaps = 5/552 (0%)

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I  G   D  +   ++ M+ KC   G + D+R++FD M + N++SW  II+G V  G   
Sbjct: 2   IDNGFEFDQYMRNRVLLMHVKC---GMMIDARRLFDEMPERNLVSWNTIISGLVDVGDF- 57

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
            EA +LF +M +       FTFA +++A   L   ++  Q++   +K G   D  V  +L
Sbjct: 58  MEAFRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCAL 117

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I MY++ G +EDAR  FE + EK  V +NT++  YA +  SE+A ++ +E+ D+GV    
Sbjct: 118 IDMYSKCGSIEDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDH 177

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           +TF+ ++   + + ++   +Q HA +I+ GF S+     AL+  YS+   +E A  VF +
Sbjct: 178 FTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGRIEDARHVFDK 237

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           M  +NVISW ++I G+  HG  + A+E+F +M+ + + PN IT++AVLSACSH+GL   G
Sbjct: 238 MASKNVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERG 297

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACR 669
           W+ F+SM  ++ I  R  HYACM++L+GR G L EAL  IR  P      +W   L ACR
Sbjct: 298 WEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEALALIRGAPFKPTANMWAALLTACR 357

Query: 670 VHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
           V+ + ELGK AAE +   +P     +I+L N+Y SAG+ +  A++   +K + L     C
Sbjct: 358 VNENFELGKFAAEKLYGMEPDKLNNYIVLLNIYNSAGNLKEAADVVHTLKRKGLRMRPVC 417

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQY 789
           SWIE   + H F  G+  HP+  EIY ++D+L L+I ++GY+P+   +L +++E+++   
Sbjct: 418 SWIEVKRRPHVFLSGDNRHPQRKEIYQKVDKLMLEISKYGYVPNQKTLLPDVDEQEERVR 477

Query: 790 LFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHH 849
           L+ HSEK+A+AFGLIST    P+++ +  R+CGDCH AIK I+ VTGREIV+RD+ RFHH
Sbjct: 478 LY-HSEKLAIAFGLISTPYWAPLQIVQGHRICGDCHEAIKLIARVTGREIVIRDAGRFHH 536

Query: 850 IKDGKCSCNDYW 861
            K G CSC DYW
Sbjct: 537 FKHGHCSCEDYW 548



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/336 (35%), Positives = 187/336 (55%), Gaps = 10/336 (2%)

Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
            E +  + N ++ ++ KCG + +A ++F  M  +R++VSW+++IS  V+ G  ++A  +F
Sbjct: 6   FEFDQYMRNRVLLMHVKCGMMIDARRLFDEM-PERNLVSWNTIISGLVDVGDFMEAFRLF 64

Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           + M E       + F+ +IRA +  E ++IG  ++   LK G  D D+ V CALIDM+ K
Sbjct: 65  LNMWEEFSDAGSFTFAVMIRASAGLELISIGRQLHACTLKMGIGD-DIFVSCALIDMYSK 123

Query: 229 -GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
            GS+  E A  VF++M EK TVGW  +I      G   +A+ ++ +M  SG   D FT S
Sbjct: 124 CGSI--EDARFVFEEMPEKTTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFS 181

Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            +V  C+ L      KQ H+  IR G   D+    +LVD Y+K    G ++D+R VFD+M
Sbjct: 182 MIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKW---GRIEDARHVFDKM 238

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              NV+SW A+I GY  + GR  EAV+LF  MIQ ++ PNH TF +VL AC +   S   
Sbjct: 239 ASKNVISWNALIGGY-GNHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSHSGLSERG 297

Query: 408 EQVYTHAVKRGRALDDCVGNS-LISMYARSGRMEDA 442
            +++    +  R     +  + +I +  R G +++A
Sbjct: 298 WEIFQSMGRDNRIKPRAMHYACMIELMGREGLLDEA 333



 Score =  110 bits (274), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 116/238 (48%), Gaps = 8/238 (3%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+++++++        +G+ +H+   +  +  +  +  +LI +YSKCG + +A  +F+ M
Sbjct: 78  TFAVMIRASAGLELISIGRQLHACTLKMGIGDDIFVSCALIDMYSKCGSIEDARFVFEEM 137

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             K   V W+++I+ Y   G   +A+ M+ EM + G   + + FS ++R C+   +V   
Sbjct: 138 PEK-TTVGWNTIIAGYALHGYSEEALDMYYEMRDSGVKMDHFTFSMIVRICARLASVEHA 196

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
              +  L++ G F SD+    AL+D + K    +E A  VFDKM  KN + W  +I    
Sbjct: 197 KQAHAALIRHG-FGSDIVANTALVDFYSKWG-RIEDARHVFDKMASKNVISWNALIGGYG 254

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             G   +A+ LF  MI     P+  T   V+SACS      SG     W I   +  D
Sbjct: 255 NHGRGSEAVELFEQMIQERMNPNHITFLAVLSACSH-----SGLSERGWEIFQSMGRD 307



 Score = 75.9 bits (185), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/125 (30%), Positives = 68/125 (54%), Gaps = 1/125 (0%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G   D  T+S++++ C R  +    K  H+ L R     + V   +L+  YSK G 
Sbjct: 168 MRDSGVKMDHFTFSMIVRICARLASVEHAKQAHAALIRHGFGSDIVANTALVDFYSKWGR 227

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A  +F  M +K +++SW+++I  Y N G+  +A+ +F +M++    PN   F AV+ 
Sbjct: 228 IEDARHVFDKMASK-NVISWNALIGGYGNHGRGSEAVELFEQMIQERMNPNHITFLAVLS 286

Query: 189 ACSNT 193
           ACS++
Sbjct: 287 ACSHS 291



 Score = 64.7 bits (156), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 41/161 (25%), Positives = 77/161 (47%), Gaps = 2/161 (1%)

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           +I +GFE +  + N ++ M+ +C  +  A ++F EM +RN++SW ++I+G    G    A
Sbjct: 1   MIDNGFEFDQYMRNRVLLMHVKCGMMIDARRLFDEMPERNLVSWNTIISGLVDVGDFMEA 60

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
             +F  M  +       T+  ++ A +   LIS G +   +   + GI   +     ++D
Sbjct: 61  FRLFLNMWEEFSDAGSFTFAVMIRASAGLELISIG-RQLHACTLKMGIGDDIFVSCALID 119

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           +  + GS+ +A      MP    V  W T +    +HG +E
Sbjct: 120 MYSKCGSIEDARFVFEEMPEKTTV-GWNTIIAGYALHGYSE 159


>gi|225456755|ref|XP_002268980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74600,
           chloroplastic [Vitis vinifera]
 gi|297733984|emb|CBI15231.3| unnamed protein product [Vitis vinifera]
          Length = 893

 Score =  431 bits (1109), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 239/671 (35%), Positives = 392/671 (58%), Gaps = 18/671 (2%)

Query: 66  LDLMTQ---KGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           LDL  Q   +   P+  T+S +L +C        G+ V   + +     +  +  ++I L
Sbjct: 233 LDLFCQMCCRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDL 292

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
           Y+KC D+++A K F  M   R++VSW+++IS +V +   + A H F EM ++G   N Y 
Sbjct: 293 YAKCRDMDQAVKEFLRM-PIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYT 351

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCG-YFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
            ++V+ AC+    +     ++ ++ K G Y DS+V    ALI+M+ K G VDL    +VF
Sbjct: 352 ITSVLTACTEPVMIKEAVQLHSWIFKTGFYLDSNV--SSALINMYSKIGVVDLSE--RVF 407

Query: 241 DKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
            +M + KN   W +MI+   Q G    A+ LF  M+  G  PD+F  S V+S    L L 
Sbjct: 408 REMESTKNLAMWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL- 466

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             G+ +H + ++ GL  D+ VG SL  MY+KC   GS+++S  VF++M D + +SW ++I
Sbjct: 467 --GRLIHCYILKIGLFTDISVGSSLFTMYSKC---GSLEESYTVFEQMPDKDNVSWASMI 521

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           TG+ +     ++AV+LF +M+  ++ P+  T  + L AC  L      ++V+ +A++   
Sbjct: 522 TGFSEHD-HAEQAVQLFREMLLEEIRPDQMTLTAALTACSALHSLEKGKEVHGYALRARV 580

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
             +  VG +L++MY++ G +  AR+ F+ L +K+  S +++V  YA+N   E A  L HE
Sbjct: 581 GKEVLVGGALVNMYSKCGAIVLARRVFDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHE 640

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           I    +   ++T +S++   + + ++  G Q+HA + K G  +   + ++L++MYS+C +
Sbjct: 641 IRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAEVSVGSSLVTMYSKCGS 700

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
           ++   +VF+++E  ++ISWT+MI  +A+HG  A AL+++  M  +G KP+ +T++ VLSA
Sbjct: 701 IDECHKVFEQIEKPDLISWTAMIVSYAQHGKGAEALKVYDLMRKEGTKPDSVTFVGVLSA 760

Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
           CSH G++ EG+ H  SM  E+GI     HYACMVDLLGRSG L EA  FI +MP+  D L
Sbjct: 761 CSHNGMVEEGYSHLNSMAKEYGIEPGYYHYACMVDLLGRSGRLKEAERFINNMPIEPDAL 820

Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
           +W   L AC+VHGD ELG+ AA+ ++E +P +  A++ LSN+ A  G WE V  IR  M+
Sbjct: 821 LWGILLAACKVHGDIELGRLAAKRVIELEPCEAGAYVTLSNICADMGWWEDVMKIRSLME 880

Query: 720 ERNLIKEAGCS 730
              + KE G S
Sbjct: 881 GTGVKKEPGWS 891



 Score =  266 bits (681), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 162/506 (32%), Positives = 281/506 (55%), Gaps = 12/506 (2%)

Query: 98  KLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           K++H+  L  + L+ N+ + NSL+  Y K   +  A ++F    +  +++SW+ +IS   
Sbjct: 65  KILHAHFLKTAILQSNTFMTNSLMGWYCKSNSMVHALRLFDKTPHP-NVISWNILISGCN 123

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
                 D+   F +M   GF PN++ + +V+ AC+   +   G ++Y   LK G+F S+ 
Sbjct: 124 QNFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFF-SNG 182

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V   +ID+F K     E A +VF  +  +N V W  +I+   +      A+ LF  M  
Sbjct: 183 YVRAGMIDLFAK-LCSFEDALRVFQDVLCENVVCWNAIISGAVKNRENWVALDLFCQMCC 241

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
             F+P+ FT S +++AC+ LE    G+ +  W I+ G   DV VG +++D+YAKC     
Sbjct: 242 RFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCR---D 298

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +D + K F RM   NV+SWT II+G+VQ       A   F +M +     N++T  SVL 
Sbjct: 299 MDQAVKEFLRMPIRNVVSWTTIISGFVQKDD-SISAFHFFKEMRKVGEKINNYTITSVLT 357

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLV 455
           AC   +    A Q+++   K G  LD  V ++LI+MY++ G ++ + + F  +   KNL 
Sbjct: 358 ACTEPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLA 417

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            +  M+ A+A++ ++ +A EL   +   G+    +  +S+L   S I ++  G  IH  I
Sbjct: 418 MWAVMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVL---SIIDSLSLGRLIHCYI 474

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           +K G  ++  + ++L +MYS+C ++E ++ VF++M D++ +SW SMITGF++H  A +A+
Sbjct: 475 LKIGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAV 534

Query: 576 EIFYKMLADGIKPNGITYIAVLSACS 601
           ++F +ML + I+P+ +T  A L+ACS
Sbjct: 535 QLFREMLLEEIRPDQMTLTAALTACS 560



 Score =  254 bits (648), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 164/606 (27%), Positives = 321/606 (52%), Gaps = 15/606 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G  P+  TY  +L +C    +   G+LV+SL  ++    N  +   +I L++K   
Sbjct: 138 MRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYVRAGMIDLFAKLCS 197

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
             +A ++F+ +  + ++V W+++IS  V   +   A+ +F +M    F PN + FS+++ 
Sbjct: 198 FEDALRVFQDVLCE-NVVCWNAIISGAVKNRENWVALDLFCQMCCRFFMPNSFTFSSILT 256

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           AC+  E +  G  + G+++KCG    DV VG A+ID++ K   D++ A K F +M  +N 
Sbjct: 257 ACAALEELEFGRGVQGWVIKCGA-GEDVFVGTAIIDLYAKCR-DMDQAVKEFLRMPIRNV 314

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V WT +I+   Q      A   F +M   G   + +T++ V++AC+E  +     QLHSW
Sbjct: 315 VSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACTEPVMIKEAVQLHSW 374

Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGG 367
             +TG  LD  V  +L++MY+K    G VD S +VF  M    N+  W  +I+ + QSG 
Sbjct: 375 IFKTGFYLDSNVSSALINMYSKI---GVVDLSERVFREMESTKNLAMWAVMISAFAQSGS 431

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS-NVAEQVYTHAVKRGRALDDCVG 426
             + AV+LF  M+Q  + P+ F  +SVL    +++DS ++   ++ + +K G   D  VG
Sbjct: 432 TGR-AVELFQRMLQEGLRPDKFCSSSVL----SIIDSLSLGRLIHCYILKIGLFTDISVG 486

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           +SL +MY++ G +E++   FE + +K+ VS+ +M+  ++++ ++E+A +L  E+    + 
Sbjct: 487 SSLFTMYSKCGSLEESYTVFEQMPDKDNVSWASMITGFSEHDHAEQAVQLFREMLLEEIR 546

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
               T  + L+  S++ ++ KG+++H   +++       +  AL++MYS+C  +  A +V
Sbjct: 547 PDQMTLTAALTACSALHSLEKGKEVHGYALRARVGKEVLVGGALVNMYSKCGAIVLARRV 606

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  +  ++  S +S+++G+A++G+   AL +F+++    +  +  T  +V+ A +    +
Sbjct: 607 FDMLPQKDQFSCSSLVSGYAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSL 666

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
             G     +   + G+   +   + +V +  + GS+ E  +    +    D++ W   + 
Sbjct: 667 DIG-TQLHACVTKMGLNAEVSVGSSLVTMYSKCGSIDECHKVFEQIE-KPDLISWTAMIV 724

Query: 667 ACRVHG 672
           +   HG
Sbjct: 725 SYAQHG 730



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/493 (29%), Positives = 247/493 (50%), Gaps = 12/493 (2%)

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           I++   LK     S+  +  +L+  + K S  +  A ++FDK    N + W ++I+ C Q
Sbjct: 66  ILHAHFLKTAILQSNTFMTNSLMGWYCK-SNSMVHALRLFDKTPHPNVISWNILISGCNQ 124

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
                D+ R F  M  SGF P++FT   V+SAC+ L     G+ ++S A++ G   +  V
Sbjct: 125 NFSFEDSWRNFCKMRFSGFDPNQFTYGSVLSACTALGSPLYGELVYSLALKNGFFSNGYV 184

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
              ++D++AK     S +D+ +VF  +L  NV+ W AII+G V++   +  A+ LF  M 
Sbjct: 185 RAGMIDLFAKLC---SFEDALRVFQDVLCENVVCWNAIISGAVKNR-ENWVALDLFCQMC 240

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
                PN FTF+S+L AC  L +      V    +K G   D  VG ++I +YA+   M+
Sbjct: 241 CRFFMPNSFTFSSILTACAALEELEFGRGVQGWVIKCGAGEDVFVGTAIIDLYAKCRDMD 300

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
            A K F  +  +N+VS+ T++  + +  +S  AF    E+   G   + YT  S+L+  +
Sbjct: 301 QAVKEFLRMPIRNVVSWTTIISGFVQKDDSISAFHFFKEMRKVGEKINNYTITSVLTACT 360

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISWT 559
               I +  Q+H+ I K+GF  +  + +ALI+MYS+   V+ + +VF+EME  +N+  W 
Sbjct: 361 EPVMIKEAVQLHSWIFKTGFYLDSNVSSALINMYSKIGVVDLSERVFREMESTKNLAMWA 420

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
            MI+ FA+ G   RA+E+F +ML +G++P+     +VLS      L     +       +
Sbjct: 421 VMISAFAQSGSTGRAVELFQRMLQEGLRPDKFCSSSVLSIIDSLSL----GRLIHCYILK 476

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
            G+   +   + +  +  + GSL E+      MP   D + W + +     H   E    
Sbjct: 477 IGLFTDISVGSSLFTMYSKCGSLEESYTVFEQMP-DKDNVSWASMITGFSEHDHAEQAVQ 535

Query: 680 A-AEMILEQDPQD 691
              EM+LE+   D
Sbjct: 536 LFREMLLEEIRPD 548



 Score = 72.4 bits (176), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 106/212 (50%), Gaps = 13/212 (6%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +G ++ A+     +       D  T S ++ +     +  +G  +H+ +T+  L   
Sbjct: 625 YAQNGYIEDALLLFHEIRMADLWIDSFTVSSVIGAVAILNSLDIGTQLHACVTKMGLNAE 684

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + +SL+++YSKCG ++E +K+F+ +  K D++SW++MI SY   GK  +A+ ++  M 
Sbjct: 685 VSVGSSLVTMYSKCGSIDECHKVFEQI-EKPDLISWTAMIVSYAQHGKGAEALKVYDLMR 743

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGH-----IIYGFLLKCGYFDSDVCVGCALIDMFV 227
           + G  P+   F  V+ ACS+   V  G+     +   + ++ GY+         ++D+  
Sbjct: 744 KEGTKPDSVTFVGVLSACSHNGMVEEGYSHLNSMAKEYGIEPGYYHY-----ACMVDLLG 798

Query: 228 KGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           + S  L+ A +  + M  E + + W +++  C
Sbjct: 799 R-SGRLKEAERFINNMPIEPDALLWGILLAAC 829


>gi|449525261|ref|XP_004169636.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 229/609 (37%), Positives = 353/609 (57%), Gaps = 39/609 (6%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-GSVDDSRKVFDRM 347
           ++S   +  LF+  KQ+H+  IR GL+    V   L+ M  K  V  GS      VF ++
Sbjct: 45  LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSY--PLLVFGQV 102

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              N   WTA+I GY   G    E+   ++ M +  V P  FTF+++ KACG  L+ ++ 
Sbjct: 103 NYPNPFLWTAMIRGYALQG-LLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161

Query: 408 EQVYTHAVK-RGRALDDCVGNSLISMY-------------------------------AR 435
           +QV+   +   G A D  VGNS+I +Y                               A+
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 221

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G ME A   F+ L  K++V++  MV  YA+N   ++A E   +++D G+ T   T A +
Sbjct: 222 YGDMESASGLFDDLPSKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 281

Query: 496 LSGASSIGAIGKGEQIHARIIKSGF--ESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           +S  + +GA+     I     +SGF    N  + +ALI MYS+C + + A++VF+ M++R
Sbjct: 282 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 341

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           NV S++SMI G+A HG A  AL++F+ ML   I+PN +T+I +LSACSHAGL+ +G + F
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 401

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M    G+    +HYACMVDLLGR+G L EAL+ +++MP+  +  VW   LGACR+HG+
Sbjct: 402 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            ++ + AA  + + +P     +ILLSN+YASAG WE V+ +RK ++E+   K  GCSW E
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 521

Query: 734 ADN-KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
             N ++H F  G+T+HP++ EI   L QL  +++  GY P+     ++L +++K + L  
Sbjct: 522 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMS 581

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSEK+A+A+GL+ T     I++ KN+R+C DCH  +   S +TGREI++RD+ RFHH  +
Sbjct: 582 HSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHN 641

Query: 853 GKCSCNDYW 861
           G CSC ++W
Sbjct: 642 GTCSCGNFW 650



 Score =  165 bits (418), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 220/465 (47%), Gaps = 48/465 (10%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG--NKRDIVSWSSMISSY 155
           K VH+ + R+ L   S +L  LI + +K  D+   +      G  N  +   W++MI  Y
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIRGY 117

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
             +G   ++ + +  M   G  P  + FSA+ +AC    N+ +G  ++   +  G F SD
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177

Query: 216 VCVGCALIDMFVKGSV------------------------------DLESAYKVFDKMTE 245
           + VG ++ID++VK                                 D+ESA  +FD +  
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPS 237

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           K+ V WT M+T   Q G P++A+  F  M   G   D  TL+GV+SAC++L        +
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297

Query: 306 HSWAIRTGLAL--DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
              A R+G     +V VG +L+DMY+KC   GS D++ KVF+ M + NV S++++I GY 
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKC---GSPDEAYKVFEVMKERNVFSYSSMILGYA 354

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALD 422
              GR   A++LF DM++ ++ PN  TF  +L AC +        Q++    K  G A  
Sbjct: 355 MH-GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 413

Query: 423 DCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAFELLH 478
                 ++ +  R+G +E+A    +++  E N   +  ++ A   + N   ++ A   L 
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF 473

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           ++E  G+G     +  L +  +S G   +  ++   I + GF+ N
Sbjct: 474 KLEPNGIG----NYILLSNIYASAGRWEEVSKLRKVIREKGFKKN 514



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 182/421 (43%), Gaps = 77/421 (18%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS-LLTRSKLEPNSVILNSLISLYSKCG 127
           M + G  P   T+S L K+C  + N  LGK VH+  +       +  + NS+I LY KCG
Sbjct: 133 MRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCG 192

Query: 128 DLNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVN 157
            L  A K+F  M  +                              +D+V+W++M++ Y  
Sbjct: 193 FLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPSKDMVAWTAMVTGYAQ 252

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS-DV 216
            G+  +A+  F +M ++G   +E   + VI AC+    V   + I     + G+  S +V
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNV 312

Query: 217 CVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            VG ALIDM+ K GS D   AYKVF+ M E+N   ++ MI      G    A++LF DM+
Sbjct: 313 VVGSALIDMYSKCGSPD--EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDML 370

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
            +   P++ T  G++SACS   L   G+QL +        ++   G +    +  C VD 
Sbjct: 371 KTEIRPNKVTFIGILSACSHAGLVEQGRQLFA-------KMEKFFGVAPSPDHYACMVD- 422

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
                                      +   G  +EA+ L   M    + PN   + ++L
Sbjct: 423 --------------------------LLGRAGCLEEALDLVKTM---PMEPNGGVWGALL 453

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKN 453
            AC    + ++A+       K      + +GN ++  ++YA +GR E+  K  + + EK 
Sbjct: 454 GACRIHGNPDIAQIAANELFK---LEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKG 510

Query: 454 L 454
            
Sbjct: 511 F 511


>gi|449434342|ref|XP_004134955.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 599

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 213/560 (38%), Positives = 354/560 (63%), Gaps = 5/560 (0%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+  I +GL     +   L+ +   CT  GS+  +R++F  + + +   + +++   
Sbjct: 44  QQVHAHIIVSGLHRSRSLLTKLISLV--CTA-GSITYARRLFPTVPNPDSFLFDSLLK-V 99

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
               G   + V  +  M+      +++TF SV+KAC +L    + +++++H +  G   D
Sbjct: 100 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 159

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  +LI++YA++  M+ A+K F+++ ++ ++++N+++  Y +N   +++  L H + +
Sbjct: 160 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 219

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           +G    + T  SLLS  S +GA+  G  +H     +GF+ N  +  +LI+MY+RC NV  
Sbjct: 220 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 279

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A +VF  M++RNV++WT+MI+G+  HG+  +A+E+F +M A G +PN IT++AVLSAC+H
Sbjct: 280 AREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAH 339

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS-MPLSADVLVW 661
           +GLI +G + F SM + +G+V  +EH  CMVD+ GR+G L +A +FI+  +P      VW
Sbjct: 340 SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVW 399

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            + LGACR+H + +LG   AE +L  +P++P  +++LSN+YA AG  + V  +R  M  R
Sbjct: 400 TSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 459

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            L K+ G S IE + K + F +G+ SHP+T  IY  LD+L  +  E GY+P    ++H+L
Sbjct: 460 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 519

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EEE++   L  HSEK+A+AFGL+ T++ + IR+ KNLR+C DCH+AIK+IS++  REI++
Sbjct: 520 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 579

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD  RFHH KDG CSC DYW
Sbjct: 580 RDKFRFHHFKDGSCSCLDYW 599



 Score =  193 bits (490), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/373 (33%), Positives = 209/373 (56%), Gaps = 17/373 (4%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL+S  R RN    + VH+ +  S L  +  +L  LISL    G +  A ++F ++ N  
Sbjct: 33  LLRSGPRLRNL---QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNP- 88

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
           D   + S++      G  +D +  +  ML  G   + Y F++VI+AC++   + +G  I+
Sbjct: 89  DSFLFDSLLKVTSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIH 148

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
             ++ CGY  SD+ V  ALI ++ K S D++ A KVFD M ++  + W  +I+   Q G 
Sbjct: 149 SHVMVCGY-GSDMYVQAALIALYAKAS-DMKVAKKVFDAMPQRTIIAWNSLISGYDQNGL 206

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
           P+++I LF  M+ SGF PD  T+  ++S+CS+L     G  LH +A   G  L+V +G S
Sbjct: 207 PQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTS 266

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L++MY +C   G+V  +R+VFD M + NV++WTA+I+GY    G  ++A++LF++M    
Sbjct: 267 LINMYTRC---GNVSKAREVFDSMKERNVVTWTAMISGYGMH-GYGRQAMELFTEMRAYG 322

Query: 384 VAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNS--LISMYARSGRM 439
             PN+ TF +VL AC +  L+D     +V++ ++K    L   V ++  ++ M+ R+G +
Sbjct: 323 PRPNNITFVAVLSACAHSGLIDD--GRRVFS-SMKEAYGLVPGVEHNVCMVDMFGRAGLL 379

Query: 440 EDARKAFESLFEK 452
            DA +  +    K
Sbjct: 380 NDAYQFIKKFIPK 392



 Score =  126 bits (316), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 82/287 (28%), Positives = 151/287 (52%), Gaps = 17/287 (5%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T++ ++K+C       LGK +HS +       +  +  +LI+LY+K  D+  A K+F +M
Sbjct: 127 TFTSVIKACADLSALRLGKEIHSHVMVCGYGSDMYVQAALIALYAKASDMKVAKKVFDAM 186

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             +R I++W+S+IS Y   G   ++I +F  M+E GF P+     +++ +CS    +  G
Sbjct: 187 -PQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGALDFG 245

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
             ++ +    G FD +V +G +LI+M+ +   ++  A +VFD M E+N V WT MI+   
Sbjct: 246 CWLHDYADGNG-FDLNVVLGTSLINMYTRCG-NVSKAREVFDSMKERNVVTWTAMISGYG 303

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS-----WAIRTGL 314
             G  R A+ LF +M   G  P+  T   V+SAC+   L   G+++ S     + +  G+
Sbjct: 304 MHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVPGV 363

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML--DHNVMSWTAII 359
             +VC    +VDM+ +    G ++D+ +   + +  +     WT+++
Sbjct: 364 EHNVC----MVDMFGRA---GLLNDAYQFIKKFIPKEPGPAVWTSML 403



 Score = 97.4 bits (241), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 67/226 (29%), Positives = 111/226 (49%), Gaps = 5/226 (2%)

Query: 36  FIAQPTTSEPLSNRLIYHLN-DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F A P  +    N LI   + +G  Q++I    LM + G  PD  T   LL SC +    
Sbjct: 183 FDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMMESGFQPDSATIVSLLSSCSQLGAL 242

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G  +H     +  + N V+  SLI++Y++CG++++A ++F SM  +R++V+W++MIS 
Sbjct: 243 DFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSKAREVFDSM-KERNVVTWTAMISG 301

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G    A+ +F EM   G  PN   F AV+ AC+++  +  G  ++  + +      
Sbjct: 302 YGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAHSGLIDDGRRVFSSMKEAYGLVP 361

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMT--EKNTVGWTLMITRC 258
            V     ++DMF +  + L  AY+   K    E     WT M+  C
Sbjct: 362 GVEHNVCMVDMFGRAGL-LNDAYQFIKKFIPKEPGPAVWTSMLGAC 406


>gi|449457516|ref|XP_004146494.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g44230-like [Cucumis sativus]
          Length = 650

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 228/609 (37%), Positives = 354/609 (58%), Gaps = 39/609 (6%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-GSVDDSRKVFDRM 347
           ++S   +  LF+  KQ+H+  IR GL+    V   L+ M  K  V  GS      VF ++
Sbjct: 45  LMSILHDCTLFSQIKQVHAHIIRNGLSQCSYVLTKLIRMLTKVDVPMGSY--PLLVFGQV 102

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              N   WTA+I GY   G    E+   ++ M +  V P  FTF+++ KACG  L+ ++ 
Sbjct: 103 NYPNPFLWTAMIRGYALQG-LLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLG 161

Query: 408 EQVYTHAVK-RGRALDDCVGNSLISMYARSGRMEDARKAFESLFE--------------- 451
           +QV+   +   G A D  VGNS+I +Y + G +  ARK F+ + E               
Sbjct: 162 KQVHAQTILIGGFASDLYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAK 221

Query: 452 ----------------KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
                           K++V++  MV  YA+N   ++A E   +++D G+ T   T A +
Sbjct: 222 YGDMESASGLFDDLPLKDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGV 281

Query: 496 LSGASSIGAIGKGEQIHARIIKSGF--ESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           +S  + +GA+     I     +SGF    N  + +ALI MYS+C + + A++VF+ M++R
Sbjct: 282 ISACAQLGAVKHANWIRDIAERSGFGPSGNVVVGSALIDMYSKCGSPDEAYKVFEVMKER 341

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           NV S++SMI G+A HG A  AL++F+ ML   I+PN +T+I +LSACSHAGL+ +G + F
Sbjct: 342 NVFSYSSMILGYAMHGRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLF 401

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M    G+    +HYACMVDLLGR+G L EAL+ +++MP+  +  VW   LGACR+HG+
Sbjct: 402 AKMEKFFGVAPSPDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGN 461

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            ++ + AA  + + +P     +ILLSN+YASAG WE V+ +RK ++E+   K  GCSW E
Sbjct: 462 PDIAQIAANELFKLEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKGFKKNPGCSWFE 521

Query: 734 ADN-KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
             N ++H F  G+T+HP++ EI   L QL  +++  GY P+     ++L +++K + L  
Sbjct: 522 GKNGEIHDFFAGDTTHPRSSEIRQALKQLIERLRSHGYKPNLGSAPYDLTDDEKERILMS 581

Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
           HSEK+A+A+GL+ T     I++ KN+R+C DCH  +   S +TGREI++RD+ RFHH  +
Sbjct: 582 HSEKLALAYGLLCTEAGDTIKIMKNIRICEDCHNVMCAASEITGREIIVRDNMRFHHFHN 641

Query: 853 GKCSCNDYW 861
           G CSC ++W
Sbjct: 642 GTCSCGNFW 650



 Score =  164 bits (415), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 129/465 (27%), Positives = 220/465 (47%), Gaps = 48/465 (10%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG--NKRDIVSWSSMISSY 155
           K VH+ + R+ L   S +L  LI + +K  D+   +      G  N  +   W++MI  Y
Sbjct: 59  KQVHAHIIRNGLSQCSYVLTKLIRMLTKV-DVPMGSYPLLVFGQVNYPNPFLWTAMIRGY 117

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
             +G   ++ + +  M   G  P  + FSA+ +AC    N+ +G  ++   +  G F SD
Sbjct: 118 ALQGLLSESTNFYTRMRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASD 177

Query: 216 VCVGCALIDMFVKGSV------------------------------DLESAYKVFDKMTE 245
           + VG ++ID++VK                                 D+ESA  +FD +  
Sbjct: 178 LYVGNSMIDLYVKCGFLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPL 237

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           K+ V WT M+T   Q G P++A+  F  M   G   D  TL+GV+SAC++L        +
Sbjct: 238 KDMVAWTAMVTGYAQNGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWI 297

Query: 306 HSWAIRTGLAL--DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
              A R+G     +V VG +L+DMY+KC   GS D++ KVF+ M + NV S++++I GY 
Sbjct: 298 RDIAERSGFGPSGNVVVGSALIDMYSKC---GSPDEAYKVFEVMKERNVFSYSSMILGYA 354

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALD 422
              GR   A++LF DM++ ++ PN  TF  +L AC +        Q++    K  G A  
Sbjct: 355 MH-GRAHSALQLFHDMLKTEIRPNKVTFIGILSACSHAGLVEQGRQLFAKMEKFFGVAPS 413

Query: 423 DCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAFELLH 478
                 ++ +  R+G +E+A    +++  E N   +  ++ A   + N   ++ A   L 
Sbjct: 414 PDHYACMVDLLGRAGCLEEALDLVKTMPMEPNGGVWGALLGACRIHGNPDIAQIAANELF 473

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           ++E  G+G     +  L +  +S G   +  ++   I + GF+ N
Sbjct: 474 KLEPNGIG----NYILLSNIYASAGRWEEVSKLRKVIREKGFKKN 514



 Score =  124 bits (312), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 182/421 (43%), Gaps = 77/421 (18%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHS-LLTRSKLEPNSVILNSLISLYSKCG 127
           M + G  P   T+S L K+C  + N  LGK VH+  +       +  + NS+I LY KCG
Sbjct: 133 MRRDGVGPVSFTFSALFKACGAALNMDLGKQVHAQTILIGGFASDLYVGNSMIDLYVKCG 192

Query: 128 DLNEANKIFKSMGNK------------------------------RDIVSWSSMISSYVN 157
            L  A K+F  M  +                              +D+V+W++M++ Y  
Sbjct: 193 FLGCARKVFDEMSERDVVSWTELIVAYAKYGDMESASGLFDDLPLKDMVAWTAMVTGYAQ 252

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS-DV 216
            G+  +A+  F +M ++G   +E   + VI AC+    V   + I     + G+  S +V
Sbjct: 253 NGRPKEALEYFQKMQDVGMETDEVTLAGVISACAQLGAVKHANWIRDIAERSGFGPSGNV 312

Query: 217 CVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
            VG ALIDM+ K GS D   AYKVF+ M E+N   ++ MI      G    A++LF DM+
Sbjct: 313 VVGSALIDMYSKCGSPD--EAYKVFEVMKERNVFSYSSMILGYAMHGRAHSALQLFHDML 370

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
            +   P++ T  G++SACS   L   G+QL +        ++   G +    +  C VD 
Sbjct: 371 KTEIRPNKVTFIGILSACSHAGLVEQGRQLFA-------KMEKFFGVAPSPDHYACMVD- 422

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
                                      +   G  +EA+ L   M    + PN   + ++L
Sbjct: 423 --------------------------LLGRAGCLEEALDLVKTM---PMEPNGGVWGALL 453

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI--SMYARSGRMEDARKAFESLFEKN 453
            AC    + ++A+       K      + +GN ++  ++YA +GR E+  K  + + EK 
Sbjct: 454 GACRIHGNPDIAQIAANELFK---LEPNGIGNYILLSNIYASAGRWEEVSKLRKVIREKG 510

Query: 454 L 454
            
Sbjct: 511 F 511


>gi|296084465|emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 223/560 (39%), Positives = 348/560 (62%), Gaps = 4/560 (0%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G   H+  IR GL  D      L++MY+KC   G V+ +RK+FD M   +++SW  ++  
Sbjct: 66  GMACHAQIIRVGLRADTITSNMLMNMYSKC---GLVESARKLFDEMPVRSLVSWNTMVGS 122

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q+G  +K A+ LF  M +   + + FT +SV+ AC         +Q++  A+K     
Sbjct: 123 HTQNGDCEK-ALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDS 181

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  VG +L+ +YA+ G ++DA   FE + E++ V++++MV  Y +N   E+A  L H  +
Sbjct: 182 NVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 241

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             G+  + +T +S LS  ++  A+ +G+Q+ A   K+G  SN  + ++LI MY++C  +E
Sbjct: 242 AMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIE 301

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A+ VF  +E++NV+ W ++++GF++H  +  A+  F KM   GI PN ITYI+VLSACS
Sbjct: 302 EAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACS 361

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H GL+ +G K+F  M   H +   + HY+CMVD+LGR+G L EA +FI  MP  A   +W
Sbjct: 362 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMW 421

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            + L +CR++ + EL + AA+ + E +P +   H+LLSN+YA+   WE VA  R  +KE 
Sbjct: 422 GSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKES 481

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
              KE G SWIE  +KVH F VGE +HP+ +EIY +L+ L  ++K+ GY   T   LH++
Sbjct: 482 KAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDV 541

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EE +K + L  HSEK+A+ FG++      PIR+ KNLR+CGDCH+ +K  S +T REI++
Sbjct: 542 EESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIV 601

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFHH K+G CSC ++W
Sbjct: 602 RDTNRFHHFKNGYCSCGEFW 621



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 178/318 (55%), Gaps = 7/318 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL+S  R+R    G   H+ + R  L  +++  N L+++YSKCG +  A K+F  M   R
Sbjct: 53  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP-VR 111

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW++M+ S+   G    A+ +F++M + G   +E+  S+V+ AC+    V     ++
Sbjct: 112 SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 171

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           GF LK    DS+V VG AL+D++ K  + ++ A  VF+ M E++ V W+ M+    Q   
Sbjct: 172 GFALKTA-LDSNVFVGTALLDVYAKCGL-VKDANLVFECMPERSDVTWSSMVAGYVQNEL 229

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ LF      G   ++FT+S  +SAC+       GKQ+ + + +TG+  ++ V  S
Sbjct: 230 YEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISS 289

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMYAKC   G ++++  VF  + + NV+ W AI++G+ +   R  EA+  F  M Q  
Sbjct: 290 LIDMYAKC---GIIEEAYTVFSSVEEKNVVLWNAILSGFSRH-VRSLEAMIYFEKMQQMG 345

Query: 384 VAPNHFTFASVLKACGNL 401
           + PN  T+ SVL AC +L
Sbjct: 346 ICPNDITYISVLSACSHL 363



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 7/352 (1%)

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +D      L++M+ K  + +ESA K+FD+M  ++ V W  M+   TQ G    A+ LF+ 
Sbjct: 80  ADTITSNMLMNMYSKCGL-VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQ 138

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G     FT+S VV AC+        KQLH +A++T L  +V VG +L+D+YAKC  
Sbjct: 139 MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKC-- 196

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G V D+  VF+ M + + ++W++++ GYVQ+   + EA+ LF       +  N FT +S
Sbjct: 197 -GLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE-EALVLFHRAQAMGLEHNQFTISS 254

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            L AC         +QV   + K G   +  V +SLI MYA+ G +E+A   F S+ EKN
Sbjct: 255 ALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKN 314

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +V +N ++  +++++ S +A     +++  G+  +  T+ S+LS  S +G + KG +   
Sbjct: 315 VVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFD 374

Query: 514 RIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
            +I+      N   Y+ ++ +  R   +  A      M  D     W S++ 
Sbjct: 375 LMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 426



 Score = 72.8 bits (177), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 41/163 (25%), Positives = 86/163 (52%), Gaps = 3/163 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK V ++  ++ +  N  +++SLI +Y+KCG + EA  +F S+  K ++V W++++S + 
Sbjct: 268 GKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEK-NVVLWNAILSGFS 326

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              + ++A+  F +M ++G CPN+  + +V+ ACS+   V  G   +  +++      +V
Sbjct: 327 RHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNV 386

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
                ++D+  +  + L  A    D+M    T   W  ++  C
Sbjct: 387 LHYSCMVDILGRAGL-LHEAKDFIDRMPFDATASMWGSLLASC 428



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 2/182 (1%)

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
            T       LL  ++   A  +G   HA+II+ G  ++    N L++MYS+C  VE+A +
Sbjct: 44  ATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK 103

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F EM  R+++SW +M+    ++G   +AL +F +M  +G   +  T  +V+ AC+    
Sbjct: 104 LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCC 163

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + E  K       +  +   +     ++D+  + G + +A      MP  +DV  W + +
Sbjct: 164 VFEC-KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDV-TWSSMV 221

Query: 666 GA 667
             
Sbjct: 222 AG 223


>gi|449520333|ref|XP_004167188.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 232/627 (37%), Positives = 340/627 (54%), Gaps = 73/627 (11%)

Query: 304 QLHS-WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +LHS   I   L +D  +   L+  Y   +  G    +R +FDR L+ NV+ +  +I  Y
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAY---SAQGETSVARYIFDRSLEKNVVFFNVMIRSY 112

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V +     EA+ +F  M+     P+H+TF  VLKAC  L +  V  QV+   VK G   +
Sbjct: 113 VNNNLY-VEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171

Query: 423 DCVGNSLISMY-------------------------------ARSGRMEDA--------- 442
             +GN+L++MY                               A+SG+ +DA         
Sbjct: 172 LFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDS 231

Query: 443 ----------------------------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                                          FE + +KNL+S+N M+  Y  N    +A 
Sbjct: 232 LNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAV 291

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L  ++E+ G+   A T ASLL     + A+  G ++H  I K   + N  + NAL+ MY
Sbjct: 292 SLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMY 351

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C  +E A  VF +M  R+V+SWTSM++ + + G    A+ +F KML  G  P+ I ++
Sbjct: 352 AKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFV 411

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           +VLSACSH GL+ +G  +FR M +++GIV R+EH+ACMVDL GR+G + EA  FI+ MP+
Sbjct: 412 SVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPM 471

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             +  VW   L ACRVH   ++G  AA+++ +  P+    ++LLSN+YA AG W+ V N+
Sbjct: 472 EPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNV 531

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R  MK+  + K  G S +E + +VH F  G+  HP+   IY ELD L  K+KE GY+P T
Sbjct: 532 RYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQT 591

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
              LH++E E K  +L  HSEK+A+ F +++T +  PIR+ KNLRVCGDCH AIK IS +
Sbjct: 592 ESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKI 651

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             R I++RD NRFHH  +G CSC DYW
Sbjct: 652 VSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  163 bits (413), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 46/356 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+    +A+    +M     +PD  T+  +LK+C    N  +G  VH  + +  L+ N
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I N+L+++Y KCG L EA K+   M   RD+VSW+SM++ Y   G+  DA+ +  EM 
Sbjct: 172 LFIGNALVAMYGKCGCLREARKVLDQMP-YRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 173 ELGFCPNEYCFSAV--IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            L    +    +++  +   ++ ENV   H                              
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIH------------------------------ 260

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                   +F++MT+KN + W +MI        P +A+ LFL M   G  PD  T++ ++
Sbjct: 261 -------NMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC +L     G++LH +  +  L  ++ +  +L+DMYAKC   G ++++R VFD+M   
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKC---GCLEEARDVFDKMRLR 370

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDS 404
           +V+SWT++++ Y +S G+  +AV LF+ M+     P+   F SVL AC +  LLD 
Sbjct: 371 DVVSWTSMMSAYGRS-GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQ 425



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 227/479 (47%), Gaps = 50/479 (10%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF-KSMGNKRDIVSWSSMISS 154
           L KL   ++    L  +  +   L+  YS  G+ + A  IF +S+  ++++V ++ MI S
Sbjct: 54  LNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSL--EKNVVFFNVMIRS 111

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YVN    V+A+ +F  ML   F P+ Y F  V++ACS  +N+ +G  ++  ++K G  D+
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG-LDT 170

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           ++ +G AL+ M+ K    L  A KV D+M  ++ V W  M+    Q G   DA+ +  +M
Sbjct: 171 NLFIGNALVAMYGKCGC-LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229

Query: 275 ILSGFLPDRFTL---SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
                  D   L   +G +++ S +  +TS +                            
Sbjct: 230 -------DSLNLNHDAGTMASLSPVVCYTSLE---------------------------- 254

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
               +V     +F+RM   N++SW  +I  YV +     EAV LF  M +  + P+  T 
Sbjct: 255 ----NVQYIHNMFERMTKKNLISWNVMIAIYVNN-SMPNEAVSLFLQMEECGMKPDAVTI 309

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           AS+L ACG+L    +  +++ +  K     +  + N+L+ MYA+ G +E+AR  F+ +  
Sbjct: 310 ASLLPACGDLSALFLGRRLHKYIEKGNLQPNLLLENALLDMYAKCGCLEEARDVFDKMRL 369

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +++VS+ +M+ AY ++     A  L  ++ D+G    +  F S+LS  S  G + +G   
Sbjct: 370 RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHY 429

Query: 512 HARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
              + +  G       +  ++ ++ R   VE A+   K+M  + N   W ++++    H
Sbjct: 430 FRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488



 Score =  102 bits (255), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 112/214 (52%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+    +A+     M + G  PD  T + LL +C       LG+ +H  + +  L+PN
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLQPN 340

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ N+L+ +Y+KCG L EA  +F  M   RD+VSW+SM+S+Y   G+  DA+ +F +ML
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKM-RLRDVVSWTSMMSAYGRSGQGYDAVALFAKML 399

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG-HII------YGFLLKCGYFDSDVCVGCALIDM 225
           + G  P+   F +V+ ACS+T  +  G H        YG + +  +F         ++D+
Sbjct: 400 DSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF-------ACMVDL 452

Query: 226 FVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           F +   ++E AY    +M  E N   W  +++ C
Sbjct: 453 FGRAG-EVEEAYSFIKQMPMEPNERVWGALLSAC 485


>gi|356566136|ref|XP_003551291.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g47840-like [Glycine max]
          Length = 733

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 227/657 (34%), Positives = 386/657 (58%), Gaps = 8/657 (1%)

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N + LNS +    K G L +A  +F  M   RD +SW+++I+ YVN     +A+ +F  M
Sbjct: 56  NMLELNSELKQLVKQGQLCKARYMFDKM-THRDEISWTTLIAGYVNASDSYEALILFSNM 114

Query: 172 -LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            +  G   +++  S  ++AC+   N+  G +++GF +K G   S V V  ALIDM++K  
Sbjct: 115 WVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHS-VFVSSALIDMYMKVG 173

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +E   +VF+KM  +N V WT +I      G   + +  F +M  S    D  T +  +
Sbjct: 174 -KIEQGCRVFEKMMTRNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIAL 232

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            A ++  L   GK +H+  I+ G      V  +L  MY KC   G  D   ++F++M   
Sbjct: 233 KASADSSLLHHGKAIHTQTIKQGFDESSFVINTLATMYNKC---GKPDYVMRLFEKMRMP 289

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V+SWT +I+ YVQ G  ++ AV+ F  M +  V+PN +TFA+V+ +C NL  +   EQ+
Sbjct: 290 DVVSWTTLISTYVQMG-EEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQI 348

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           + H ++ G      V NS+I++Y++ G ++ A   F  +  K+++S++T++  Y++   +
Sbjct: 349 HGHVLRLGLVNALSVANSIITLYSKCGLLKSASLVFHGITRKDIISWSTIISVYSQGGYA 408

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           ++AF+ L  +   G   + +  +S+LS   S+  + +G+Q+HA ++  G +    +++A+
Sbjct: 409 KEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVHSAI 468

Query: 531 ISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNG 590
           ISMYS+C +V+ A ++F  M+  ++ISWT+MI G+A+HG++  A+ +F K+ + G+KP+ 
Sbjct: 469 ISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDY 528

Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
           + +I VL+AC+HAG++  G+ +F  M + + I    EHY C++DLL R+G L+EA   IR
Sbjct: 529 VMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEHYGCLIDLLCRAGRLSEAEHIIR 588

Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
           SMP   D +VW T L ACRVHGD + G+  AE +L+ DP     HI L+N+YA+ G W+ 
Sbjct: 589 SMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQLDPNSAGTHITLANIYAAKGRWKE 648

Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
            A+IRK MK + +IKE G SW+  +++++ F  G+ +HP++  I   L  L+  I +
Sbjct: 649 AAHIRKLMKSKGVIKERGWSWVNVNDQLNAFVAGDQAHPQSEHITTVLKLLSANIGD 705



 Score =  199 bits (507), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 144/564 (25%), Positives = 271/564 (48%), Gaps = 19/564 (3%)

Query: 67  DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKC 126
           ++    G   D    S+ LK+C    N   G+L+H    +S L  +  + ++LI +Y K 
Sbjct: 113 NMWVHPGPQRDQFMISVALKACALGVNICFGELLHGFSVKSGLIHSVFVSSALIDMYMKV 172

Query: 127 GDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAV 186
           G + +  ++F+ M   R++VSW+++I+  V+ G  ++ +  F EM       + + F+  
Sbjct: 173 GKIEQGCRVFEKMMT-RNVVSWTAIIAGLVHAGYNMEGLLYFSEMWRSKVGYDSHTFAIA 231

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
           ++A +++  +  G  I+   +K G FD    V   L  M+ K G  D     ++F+KM  
Sbjct: 232 LKASADSSLLHHGKAIHTQTIKQG-FDESSFVINTLATMYNKCGKPDY--VMRLFEKMRM 288

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            + V WT +I+   Q+G    A+  F  M  S   P+++T + V+S+C+ L     G+Q+
Sbjct: 289 PDVVSWTTLISTYVQMGEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQI 348

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H   +R GL   + V  S++ +Y+KC   G +  +  VF  +   +++SW+ II+ Y Q 
Sbjct: 349 HGHVLRLGLVNALSVANSIITLYSKC---GLLKSASLVFHGITRKDIISWSTIISVYSQ- 404

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           GG  KEA    S M +    PN F  +SVL  CG++      +QV+ H +  G   +  V
Sbjct: 405 GGYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMV 464

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            +++ISMY++ G +++A K F  +   +++S+  M++ YA++  S++A  L  +I   G+
Sbjct: 465 HSAIISMYSKCGSVQEASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGL 524

Query: 486 GTSAYTFASLLSGASSIGAIGKG---EQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
                 F  +L+  +  G +  G     +   + +      H  Y  LI +  R   +  
Sbjct: 525 KPDYVMFIGVLTACNHAGMVDLGFYYFMLMTNVYRISPSKEH--YGCLIDLLCRAGRLSE 582

Query: 543 AFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI-TYIAVLSAC 600
           A  + + M    + + W++++     HG   R      ++L   + PN   T+I + +  
Sbjct: 583 AEHIIRSMPFHTDDVVWSTLLRACRVHGDVDRGRWTAEQLLQ--LDPNSAGTHITLANIY 640

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQ 624
           +  G   E   H R +    G+++
Sbjct: 641 AAKGRWKEA-AHIRKLMKSKGVIK 663



 Score =  112 bits (280), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 74/239 (30%), Positives = 119/239 (49%), Gaps = 5/239 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  + A+     M +    P+  T++ ++ SC        G+ +H  + R  L     + 
Sbjct: 305 GEEEHAVEAFKRMRKSYVSPNKYTFAAVISSCANLAAAKWGEQIHGHVLRLGLVNALSVA 364

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NS+I+LYSKCG L  A+ +F  +  ++DI+SWS++IS Y   G   +A      M   G 
Sbjct: 365 NSIITLYSKCGLLKSASLVFHGI-TRKDIISWSTIISVYSQGGYAKEAFDYLSWMRREGP 423

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLES 235
            PNE+  S+V+  C +   +  G  ++  LL C   D +  V  A+I M+ K GSV  + 
Sbjct: 424 KPNEFALSSVLSVCGSMALLEQGKQVHAHLL-CIGIDHEAMVHSAIISMYSKCGSV--QE 480

Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           A K+F+ M   + + WT MI    + G  ++AI LF  +   G  PD     GV++AC+
Sbjct: 481 ASKIFNGMKINDIISWTAMINGYAEHGYSQEAINLFEKISSVGLKPDYVMFIGVLTACN 539



 Score = 87.0 bits (214), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 59/205 (28%), Positives = 103/205 (50%), Gaps = 7/205 (3%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A   L  M ++G  P+    S +L  C        GK VH+ L    ++  +++ 
Sbjct: 406 GYAKEAFDYLSWMRREGPKPNEFALSSVLSVCGSMALLEQGKQVHAHLLCIGIDHEAMVH 465

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           +++IS+YSKCG + EA+KIF  M    DI+SW++MI+ Y   G   +AI++F ++  +G 
Sbjct: 466 SAIISMYSKCGSVQEASKIFNGM-KINDIISWTAMINGYAEHGYSQEAINLFEKISSVGL 524

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF---DSDVCVGCALIDMFVKGSVDL 233
            P+   F  V+ AC++   V +G   Y F+L    +    S    GC LID+  +     
Sbjct: 525 KPDYVMFIGVLTACNHAGMVDLG--FYYFMLMTNVYRISPSKEHYGC-LIDLLCRAGRLS 581

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRC 258
           E+ + +       + V W+ ++  C
Sbjct: 582 EAEHIIRSMPFHTDDVVWSTLLRAC 606


>gi|222615375|gb|EEE51507.1| hypothetical protein OsJ_32672 [Oryza sativa Japonica Group]
          Length = 1100

 Score =  431 bits (1108), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 216/582 (37%), Positives = 339/582 (58%), Gaps = 5/582 (0%)

Query: 281  PDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            P   T+   + + S L     +G+QLH+ +++     +  V  SL+ +YAKC   G +  
Sbjct: 523  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC---GLLHR 579

Query: 340  SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            +++VFD M   + + WTA+IT Y+ +G   +EAV +  +     + P+ FT   VL AC 
Sbjct: 580  AQRVFDEMPHPSTVPWTALITAYMDAGDL-REAVHVARNAFANGMRPDSFTAVRVLTACA 638

Query: 400  NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
             + D    E V+  A + G A    V  + + +Y + G M  AR+ F+ +  K+ V++  
Sbjct: 639  RIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGA 698

Query: 460  MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            MV  YA N +  +A +L   ++  G+    Y  A  LS  + +GA+  G Q    +    
Sbjct: 699  MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 758

Query: 520  FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
            F  N  +  ALI MY++C +   A+ VF++M  +++I W +MI G    G    A  +  
Sbjct: 759  FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 818

Query: 580  KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            +M   G+K N  T+I +L +C+H GLI +G ++F +M   + I  R+EHY CMVDLL R+
Sbjct: 819  QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 878

Query: 640  GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
            G L EA + +  MP+ A+ ++    LG C++H +TEL +H  + ++  +P +   +++LS
Sbjct: 879  GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 938

Query: 700  NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
            N+Y++ G WE  A +R  MK + + K   CSW+E + KVH+F VG+ SHP + +IY +LD
Sbjct: 939  NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 998

Query: 760  QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
            +L L++K  GY P T  V+ ++E+E+K   L  HSEK+A+AF L+ T   + IRV KNLR
Sbjct: 999  ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLR 1058

Query: 820  VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            VC DCHTAIK +S +T REI++RD+NRFH  +DG CSCNDYW
Sbjct: 1059 VCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1100



 Score =  153 bits (387), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 223/490 (45%), Gaps = 58/490 (11%)

Query: 75  HPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           +P   T  + LKS  R       G+ +H+   +     N  +L SL+SLY+KCG L+ A 
Sbjct: 522 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 581

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F  M +    V W+++I++Y++ G   +A+H+       G  P+ +    V+ AC+  
Sbjct: 582 RVFDEMPHP-STVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 640

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            ++A G  ++    + G   S V V  A +D++VK   ++  A +VFDKM  K+ V W  
Sbjct: 641 ADLATGETVWRAAEQEGVAQS-VFVATAAVDLYVKCG-EMAKAREVFDKMRHKDAVAWGA 698

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           M+      G PR+A+ LFL M   G  PD + ++G +SAC+ L     G+Q         
Sbjct: 699 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 758

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              +  +G +L+DMYAKC   GS  ++  VF +M   +++ W A+I G   + G +K A 
Sbjct: 759 FLDNPVLGTALIDMYAKC---GSTVEAWVVFQQMRKKDIIVWNAMILGLGMT-GHEKIAF 814

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            L   M +  V  N  TF  +L +C             TH                    
Sbjct: 815 ALVGQMEKSGVKLNDNTFIGLLCSC-------------TH-------------------- 841

Query: 434 ARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
             +G ++D R+ F ++ +   +S     Y  MVD  ++    ++A +L   ++D  +  +
Sbjct: 842 --TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQL---VDDMPMPAN 896

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQ 545
           A    +LL G      I +  ++   ++K        N   Y  L ++YS     E A +
Sbjct: 897 AVILGALLGGCK----IHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAK 952

Query: 546 VFKEMEDRNV 555
           +  +M+ + V
Sbjct: 953 LRLDMKAKGV 962



 Score =  101 bits (251), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 4/268 (1%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           +  P+T  P +  +  +++ G +++A+         G  PD  T   +L +C R  +   
Sbjct: 587 MPHPSTV-PWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLAT 645

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ V     +  +  +  +  + + LY KCG++ +A ++F  M +K D V+W +M+  Y 
Sbjct: 646 GETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMVGGYA 704

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G   +A+ +F+ M   G  P+ Y  +  + AC+    + +G      +    + D+ V
Sbjct: 705 SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 764

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +G ALIDM+ K    +E A+ VF +M +K+ + W  MI      G  + A  L   M  
Sbjct: 765 -LGTALIDMYAKCGSTVE-AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 822

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQ 304
           SG   +  T  G++ +C+   L   G++
Sbjct: 823 SGVKLNDNTFIGLLCSCTHTGLIQDGRR 850



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 4/190 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G  ++A+     M  +G  PD    +  L +C R     LG+    ++   +   N V
Sbjct: 705 SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 764

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +LI +Y+KCG   EA  +F+ M  K+DI+ W++MI      G +  A  +  +M + 
Sbjct: 765 LGTALIDMYAKCGSTVEAWVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKS 823

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV-CVGCALIDMFVKGSVDL 233
           G   N+  F  ++ +C++T  +  G   +  + K  +    +   GC ++D+  +  + L
Sbjct: 824 GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC-MVDLLSRAGL-L 881

Query: 234 ESAYKVFDKM 243
           + A+++ D M
Sbjct: 882 QEAHQLVDDM 891


>gi|125544635|gb|EAY90774.1| hypothetical protein OsI_12377 [Oryza sativa Indica Group]
          Length = 653

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/569 (39%), Positives = 332/569 (58%), Gaps = 13/569 (2%)

Query: 302 GKQLHSWAIRTG-LALD--VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
           G QLH+ A+  G L  D    +  +++  YA C      D +RKVFD M   N ++W A+
Sbjct: 89  GAQLHAQAVVRGFLGGDDSTILATAVLSFYASCR---EPDLARKVFDGMPRRNAVTWNAL 145

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQ--GQVAPNHFTFASVLKACGNLLDSN----VAEQVYT 412
           I GY Q+G R +EA+ LF DM +    VAP+ +TF ++L   G    S     +   ++ 
Sbjct: 146 IKGYAQAG-RREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHA 204

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +K G   D  VG SL+S+YA    +EDA+ AF+ +   + + +++M+ AY      E 
Sbjct: 205 HVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEG 264

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  +   +    +  + + ++++ S    +G +  G+Q+HA  +KS  E +  ++NAL++
Sbjct: 265 ALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLT 324

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MYS C  +  A +VF   +  NVIS+ SMI+   +HG+   ALE F +M   G+ P+ +T
Sbjct: 325 MYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVT 384

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            + ++S+ +HAGL+ EG + F SM D  GI    +HYAC+VD+L RSG + +A++ I  M
Sbjct: 385 LLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEM 444

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P  A+  +WR  LGAC  H D E GK  AEM+ E +P +   +ILL N+YA  G W    
Sbjct: 445 PFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAE 504

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R  M ER + K+   SWIE   + ++F V + SHP + EIY  LD+L   IK  GY+P
Sbjct: 505 KVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYVP 564

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D +F  H ++ ++K + L+ H EK+A AFG ++      +R+ KNLRVCGDCH A KY S
Sbjct: 565 DISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFS 624

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +VTGREI+LRD+ RFHH   G CSC DYW
Sbjct: 625 LVTGREIILRDNQRFHHFNSGFCSCGDYW 653



 Score =  127 bits (320), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 208/441 (47%), Gaps = 52/441 (11%)

Query: 74  NHPDLDTYSLLLKSCI-------RSRNFHLGKLVHS-LLTRSKL--EPNSVILNSLISLY 123
           + P    +S LLK+         R  +  LG  +H+  + R  L  + ++++  +++S Y
Sbjct: 59  DDPTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFY 118

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG--FCPNEY 181
           + C + + A K+F  M  +R+ V+W+++I  Y   G++ +AI +F +M   G    P+ Y
Sbjct: 119 ASCREPDLARKVFDGM-PRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRY 177

Query: 182 CFSAVI----RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
            F A++    R   +   + +G  ++  ++K G  + D  VG +L+ ++      LE A 
Sbjct: 178 TFPALLSGIGREGGSGRTLELGGALHAHVIKAG-LERDPFVGASLVSLYAARRT-LEDAK 235

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
             FD++   + + W+ MI+          A+ +F +M+     P +F  S V S C  + 
Sbjct: 236 VAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMG 295

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           +   GKQ+H+ ++++    D  +  +L+ MY+ C   G ++D++KVF      NV+S+ +
Sbjct: 296 ILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDC---GCINDAQKVFSSNDCVNVISYNS 352

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV-------------LKACGNLLDS 404
           +I+   Q  G  KEA++ F  M    + P+  T  ++             L+   +++D 
Sbjct: 353 MISALGQH-GYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDI 411

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
              + +Y H          CV    + M ARSG +  A K    + FE     +  ++ A
Sbjct: 412 EGIKPMYQHYA--------CV----VDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGA 459

Query: 464 YAKNLNSE---KAFELLHEIE 481
            +K+ + E   +  E+L E+E
Sbjct: 460 CSKHRDIETGKRIAEMLFEME 480



 Score = 63.9 bits (154), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 12/126 (9%)

Query: 491 TFASLLSGASSIGA-------IGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANV 540
            F++LL  ASS  +       +G G Q+HA+ +  GF   + +  +  A++S Y+ C   
Sbjct: 65  AFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREP 124

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG--IKPNGITYIAVLS 598
           + A +VF  M  RN ++W ++I G+A+ G    A+ +F  M  +G  + P+  T+ A+LS
Sbjct: 125 DLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLS 184

Query: 599 ACSHAG 604
                G
Sbjct: 185 GIGREG 190


>gi|41469322|gb|AAS07178.1| putative pentatricopeptide repeat containing protein [Oryza sativa
           Japonica Group]
 gi|108709518|gb|ABF97313.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 654

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 222/569 (39%), Positives = 332/569 (58%), Gaps = 13/569 (2%)

Query: 302 GKQLHSWAIRTG-LALD--VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
           G QLH+ A+  G L  D    +  +++  YA C      D +RKVFD M   N ++W A+
Sbjct: 90  GAQLHAQAVVRGFLGGDDSTILATAVLSFYASCR---EPDLARKVFDGMPRRNAVTWNAL 146

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQ--GQVAPNHFTFASVLKACGNLLDSN----VAEQVYT 412
           I GY Q+G R +EA+ LF DM +    VAP+ +TF ++L   G    S     +   ++ 
Sbjct: 147 IKGYAQAG-RREEAILLFRDMKREGSHVAPDRYTFPALLSGIGREGGSGRTLELGGALHA 205

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +K G   D  VG SL+S+YA    +EDA+ AF+ +   + + +++M+ AY      E 
Sbjct: 206 HVIKAGLERDPFVGASLVSLYAARRTLEDAKVAFDQVGSSDPIVWSSMISAYVNCEEEEG 265

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A  +   +    +  + + ++++ S    +G +  G+Q+HA  +KS  E +  ++NAL++
Sbjct: 266 ALLIFFNMLCQDIKPTQFVYSTVFSVCGRMGILEMGKQVHAHSLKSNTEKDAAMFNALLT 325

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MYS C  +  A +VF   +  NVIS+ SMI+   +HG+   ALE F +M   G+ P+ +T
Sbjct: 326 MYSDCGCINDAQKVFSSNDCVNVISYNSMISALGQHGYPKEALEHFRQMKFAGLMPDEVT 385

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
            + ++S+ +HAGL+ EG + F SM D  GI    +HYAC+VD+L RSG + +A++ I  M
Sbjct: 386 LLNLISSFNHAGLVHEGLQMFNSMVDIEGIKPMYQHYACVVDMLARSGEIGKAMKTINEM 445

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
           P  A+  +WR  LGAC  H D E GK  AEM+ E +P +   +ILL N+YA  G W    
Sbjct: 446 PFEAEAPLWRIVLGACSKHRDIETGKRIAEMLFEMEPYEATNYILLGNIYARLGRWTEAE 505

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
            +R  M ER + K+   SWIE   + ++F V + SHP + EIY  LD+L   IK  GY+P
Sbjct: 506 KVRSLMGERGVYKDDAFSWIEMGQRTYRFGVDDRSHPISREIYRNLDRLISTIKVAGYVP 565

Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
           D +F  H ++ ++K + L+ H EK+A AFG ++      +R+ KNLRVCGDCH A KY S
Sbjct: 566 DISFAAHNIQRDRKEESLYYHCEKLAFAFGDLAAPSGGTLRIMKNLRVCGDCHCAYKYFS 625

Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +VTGREI+LRD+ RFHH   G CSC DYW
Sbjct: 626 LVTGREIILRDNQRFHHFNSGFCSCGDYW 654



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 107/441 (24%), Positives = 208/441 (47%), Gaps = 52/441 (11%)

Query: 74  NHPDLDTYSLLLKSCI-------RSRNFHLGKLVHS-LLTRSKL--EPNSVILNSLISLY 123
           + P    +S LLK+         R  +  LG  +H+  + R  L  + ++++  +++S Y
Sbjct: 60  DDPTPRAFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFY 119

Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG--FCPNEY 181
           + C + + A K+F  M  +R+ V+W+++I  Y   G++ +AI +F +M   G    P+ Y
Sbjct: 120 ASCREPDLARKVFDGM-PRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRY 178

Query: 182 CFSAVI----RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
            F A++    R   +   + +G  ++  ++K G  + D  VG +L+ ++      LE A 
Sbjct: 179 TFPALLSGIGREGGSGRTLELGGALHAHVIKAG-LERDPFVGASLVSLYAARRT-LEDAK 236

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
             FD++   + + W+ MI+          A+ +F +M+     P +F  S V S C  + 
Sbjct: 237 VAFDQVGSSDPIVWSSMISAYVNCEEEEGALLIFFNMLCQDIKPTQFVYSTVFSVCGRMG 296

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           +   GKQ+H+ ++++    D  +  +L+ MY+ C   G ++D++KVF      NV+S+ +
Sbjct: 297 ILEMGKQVHAHSLKSNTEKDAAMFNALLTMYSDC---GCINDAQKVFSSNDCVNVISYNS 353

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV-------------LKACGNLLDS 404
           +I+   Q  G  KEA++ F  M    + P+  T  ++             L+   +++D 
Sbjct: 354 MISALGQH-GYPKEALEHFRQMKFAGLMPDEVTLLNLISSFNHAGLVHEGLQMFNSMVDI 412

Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
              + +Y H          CV    + M ARSG +  A K    + FE     +  ++ A
Sbjct: 413 EGIKPMYQHYA--------CV----VDMLARSGEIGKAMKTINEMPFEAEAPLWRIVLGA 460

Query: 464 YAKNLNSE---KAFELLHEIE 481
            +K+ + E   +  E+L E+E
Sbjct: 461 CSKHRDIETGKRIAEMLFEME 481



 Score = 64.3 bits (155), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 38/126 (30%), Positives = 66/126 (52%), Gaps = 12/126 (9%)

Query: 491 TFASLLSGASSIGA-------IGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANV 540
            F++LL  ASS  +       +G G Q+HA+ +  GF   + +  +  A++S Y+ C   
Sbjct: 66  AFSALLKAASSSASPPRRPSSLGLGAQLHAQAVVRGFLGGDDSTILATAVLSFYASCREP 125

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG--IKPNGITYIAVLS 598
           + A +VF  M  RN ++W ++I G+A+ G    A+ +F  M  +G  + P+  T+ A+LS
Sbjct: 126 DLARKVFDGMPRRNAVTWNALIKGYAQAGRREEAILLFRDMKREGSHVAPDRYTFPALLS 185

Query: 599 ACSHAG 604
                G
Sbjct: 186 GIGREG 191


>gi|356546233|ref|XP_003541534.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Glycine max]
          Length = 582

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/530 (40%), Positives = 337/530 (63%), Gaps = 6/530 (1%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           GS+  +R++F  + D +   + ++I    + G    +AV  +  M+  ++ P+ +TF SV
Sbjct: 56  GSIAYTRRLFRSVSDPDSFLFNSLIKASSKFG-FSLDAVLFYRRMLLSRIVPSTYTFTSV 114

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           +KAC +L    +   V++H    G A D  V  +LI+ YA+S     ARK F+ + ++++
Sbjct: 115 IKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKVFDEMPQRSI 174

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           V++N+M+  Y +N  + +A E+ +++ ++ V   + TF S+LS  S +G++  G  +H  
Sbjct: 175 VAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDC 234

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           I+ SG   N  +  +L++M+SRC +V  A  VF  M + NV+ WT+MI+G+  HG+   A
Sbjct: 235 IVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGNVVLWTAMISGYGMHGYGVEA 294

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           +E+F++M A G+ PN +T++AVLSAC+HAGLI EG   F SM  E+G+V  +EH+ CMVD
Sbjct: 295 MEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVCMVD 354

Query: 635 LLGRSGSLTEALEFIRSMPLSADVL---VWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           + GR G L EA +F++   L++D L   VW   LGAC++H + +LG   AE ++  +P++
Sbjct: 355 MFGRGGLLNEAYQFVKG--LNSDELVPAVWTAMLGACKMHKNFDLGVEVAENLINAEPEN 412

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
           P  ++LLSN+YA AG  + V ++R  M +R L K+ G S I+ DN+ + F +G+ SHP+T
Sbjct: 413 PGHYVLLSNMYALAGRMDRVESVRNVMIQRGLKKQVGYSTIDVDNRSYLFSMGDKSHPET 472

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP 811
            EIY  LD+L  + K+ GY P     +HELE E++   L  HSEK+AVAFGL+ T     
Sbjct: 473 NEIYCFLDELIWRCKDAGYAPVPESAMHELEGEEREYALRYHSEKLAVAFGLMKTGDGVT 532

Query: 812 IRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +R+ KNLR+C DCH+AIK+IS V  REI++RD  RFHH ++G CSC+DYW
Sbjct: 533 LRIVKNLRICEDCHSAIKFISAVMNREIIVRDKLRFHHFREGSCSCSDYW 582



 Score =  157 bits (397), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/368 (31%), Positives = 187/368 (50%), Gaps = 18/368 (4%)

Query: 95  HLGKL--VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
           HL +L   H+ L  +    +  +L  L++L    G +    ++F+S+ +  D   ++S+I
Sbjct: 22  HLRRLQQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDP-DSFLFNSLI 80

Query: 153 SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
            +    G  +DA+  +  ML     P+ Y F++VI+AC++   + IG +++  +   GY 
Sbjct: 81  KASSKFGFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGY- 139

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
            SD  V  ALI  + K S     A KVFD+M +++ V W  MI+   Q G   +A+ +F 
Sbjct: 140 ASDSFVQAALIAFYAK-SCTPRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFN 198

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
            M  S   PD  T   V+SACS+L     G  LH   + +G+ ++V +  SLV+M+++C 
Sbjct: 199 KMRESRVEPDSATFVSVLSACSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRC- 257

Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
             G V  +R VF  M++ NV+ WTA+I+GY    G   EA+++F  M    V PN  TF 
Sbjct: 258 --GDVGRARAVFYSMIEGNVVLWTAMISGYGMH-GYGVEAMEVFHRMKARGVVPNSVTFV 314

Query: 393 SVLKACGN--LLD---SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
           +VL AC +  L+D   S  A     + V  G     C    ++ M+ R G + +A +  +
Sbjct: 315 AVLSACAHAGLIDEGRSVFASMKQEYGVVPGVEHHVC----MVDMFGRGGLLNEAYQFVK 370

Query: 448 SLFEKNLV 455
            L    LV
Sbjct: 371 GLNSDELV 378



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 101/370 (27%), Positives = 173/370 (46%), Gaps = 25/370 (6%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P   T++ ++K+C       +G LVHS +  S    +S +  +LI+ Y+K      A K+
Sbjct: 106 PSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQAALIAFYAKSCTPRVARKV 165

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +R IV+W+SMIS Y   G   +A+ +F +M E    P+   F +V+ ACS   +
Sbjct: 166 FDEM-PQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSACSQLGS 224

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++  ++  G    +V +  +L++MF +   D+  A  VF  M E N V WT MI
Sbjct: 225 LDFGCWLHDCIVGSG-ITMNVVLATSLVNMFSRCG-DVGRARAVFYSMIEGNVVLWTAMI 282

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL-----HSWAI 310
           +     G   +A+ +F  M   G +P+  T   V+SAC+   L   G+ +       + +
Sbjct: 283 SGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFASMKQEYGV 342

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM---SWTAIITGYVQSGG 367
             G+   VC    +VDM+ +    G + +    F + L+ + +    WTA++ G  +   
Sbjct: 343 VPGVEHHVC----MVDMFGR----GGLLNEAYQFVKGLNSDELVPAVWTAML-GACKMHK 393

Query: 368 RDKEAVKLFSDMIQGQVA-PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
                V++  ++I  +   P H+   S + A    +D    E V    ++RG  L   VG
Sbjct: 394 NFDLGVEVAENLINAEPENPGHYVLLSNMYALAGRMDR--VESVRNVMIQRG--LKKQVG 449

Query: 427 NSLISMYARS 436
            S I +  RS
Sbjct: 450 YSTIDVDNRS 459



 Score = 89.0 bits (219), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 64/235 (27%), Positives = 109/235 (46%), Gaps = 9/235 (3%)

Query: 29  PPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKS 87
           P  +   F   P  S    N +I  +  +G   +A+   + M +    PD  T+  +L +
Sbjct: 159 PRVARKVFDEMPQRSIVAWNSMISGYEQNGLANEAVEVFNKMRESRVEPDSATFVSVLSA 218

Query: 88  CIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM--GNKRDI 145
           C +  +   G  +H  +  S +  N V+  SL++++S+CGD+  A  +F SM  GN   +
Sbjct: 219 CSQLGSLDFGCWLHDCIVGSGITMNVVLATSLVNMFSRCGDVGRARAVFYSMIEGN---V 275

Query: 146 VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           V W++MIS Y   G  V+A+ +F  M   G  PN   F AV+ AC++   +  G  ++  
Sbjct: 276 VLWTAMISGYGMHGYGVEAMEVFHRMKARGVVPNSVTFVAVLSACAHAGLIDEGRSVFAS 335

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG--WTLMITRC 258
           + +       V     ++DMF +G + L  AY+    +     V   WT M+  C
Sbjct: 336 MKQEYGVVPGVEHHVCMVDMFGRGGL-LNEAYQFVKGLNSDELVPAVWTAMLGAC 389



 Score = 48.5 bits (114), Expect = 0.015,   Method: Compositional matrix adjust.
 Identities = 43/201 (21%), Positives = 88/201 (43%), Gaps = 15/201 (7%)

Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
           +Q HA ++ +G   +  +   L+++     ++    ++F+ + D +   + S+I   +K 
Sbjct: 27  QQAHAHLVVTGCHRSRALLTKLLTLSCAAGSIAYTRRLFRSVSDPDSFLFNSLIKASSKF 86

Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW---KH-FRSMYDEHGIVQ 624
           GF+  A+  + +ML   I P+  T+ +V+ AC+   L+  G     H F S Y     VQ
Sbjct: 87  GFSLDAVLFYRRMLLSRIVPSTYTFTSVIKACADLSLLCIGTLVHSHVFVSGYASDSFVQ 146

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
                A ++    +S +   A +    MP    ++ W + +     +G   L   A E+ 
Sbjct: 147 -----AALIAFYAKSCTPRVARKVFDEMP-QRSIVAWNSMISGYEQNG---LANEAVEVF 197

Query: 685 --LEQDPQDPAAHILLSNLYA 703
             + +   +P +   +S L A
Sbjct: 198 NKMRESRVEPDSATFVSVLSA 218


>gi|224124386|ref|XP_002330010.1| predicted protein [Populus trichocarpa]
 gi|222871435|gb|EEF08566.1| predicted protein [Populus trichocarpa]
          Length = 677

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 229/623 (36%), Positives = 348/623 (55%), Gaps = 38/623 (6%)

Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
           +FD++T+KN V + +MI      G  +DA+ +F  M   GF PD +T   V+ ACS    
Sbjct: 93  IFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGN 152

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G Q+H   ++ GL +++ +G  LV MY KC     +D +R+V D M   +++SW ++
Sbjct: 153 LWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCK---WLDAARRVLDEMPGRDMVSWNSM 209

Query: 359 ITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG 418
           + GY Q+G R  +A+KL  +M   ++ P+  T  S+L A  N    NV            
Sbjct: 210 VAGYAQNG-RFNDALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNV------------ 256

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
                        +Y +          F  L EK+L+S+N M+  Y  N    +A +L  
Sbjct: 257 -------------LYVKD--------MFVKLKEKSLISWNVMIAVYVNNAMPNEAVDLYL 295

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           +++  GV   A + +S+L     + A   G +IH  + +     N  + NALI MY++C 
Sbjct: 296 QMQVHGVEPDAVSISSVLPACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCG 355

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            ++ A  VF +M  R+V+SWTSMI+ +   G    A+ +F KM   G  P+ I +++VL+
Sbjct: 356 CLKEARAVFDQMMFRDVVSWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLA 415

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACSHAGL+ EG   F  M  E+GI   +EHY CMVDLLGR+G + EA    R MP+  + 
Sbjct: 416 ACSHAGLVDEGRYCFNLM-AEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNE 474

Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
            VW + L ACRV+    +   AA+ + +  P+    ++LLSN+YA AG W+ V  +R  M
Sbjct: 475 RVWGSLLSACRVYSSMNIALLAADHLFQLAPEQSGYYVLLSNIYAKAGRWQDVETVRSIM 534

Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVL 778
             + + K  G S +E ++ V+ F  G+ SH ++ EIY  L  L  ++KE GY+P+T+  L
Sbjct: 535 NSKGIKKIPGNSNVEINDHVYTFLAGDQSHTQSKEIYKALGVLVGRMKELGYMPETDSAL 594

Query: 779 HELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGRE 838
           H++EEE K  +L  HSEK+A+ F +++T     IR+ KN+RVCGDCH A K IS +  RE
Sbjct: 595 HDVEEEDKECHLAVHSEKLAIVFAILNTKPGSTIRITKNIRVCGDCHVATKLISKIAERE 654

Query: 839 IVLRDSNRFHHIKDGKCSCNDYW 861
           I++RD++RFHH +DG CSC DYW
Sbjct: 655 IIIRDTHRFHHFRDGVCSCGDYW 677



 Score =  182 bits (463), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 118/398 (29%), Positives = 200/398 (50%), Gaps = 56/398 (14%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+G  Q A+     M  +G +PD  TY  +LK+C  S N  +G  +H  + +  L+ N
Sbjct: 112 YVNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMN 171

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I N L+S+Y KC  L+ A ++   M   RD+VSW+SM++ Y   G+  DA+ +  EM 
Sbjct: 172 LYIGNGLVSMYGKCKWLDAARRVLDEMPG-RDMVSWNSMVAGYAQNGRFNDALKLCREME 230

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +L   P+     +++ A +NT   +  +++Y                  + DMFV     
Sbjct: 231 DLKLKPDAGTMGSLLPAVTNT---SCDNVLY------------------VKDMFV----- 264

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
                    K+ EK+ + W +MI        P +A+ L+L M + G  PD  ++S V+ A
Sbjct: 265 ---------KLKEKSLISWNVMIAVYVNNAMPNEAVDLYLQMQVHGVEPDAVSISSVLPA 315

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C +L     G+++H +  R  L  ++ +  +L+DMYAKC   G + ++R VFD+M+  +V
Sbjct: 316 CGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKC---GCLKEARAVFDQMMFRDV 372

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSN----- 405
           +SWT++I+ Y  S G+ K+AV LF  M      P+   F SVL AC    L+D       
Sbjct: 373 VSWTSMISAYGMS-GQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFN 431

Query: 406 -VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            +AE   T  ++          N ++ +  R+G++++A
Sbjct: 432 LMAEYGITPGIEH--------YNCMVDLLGRAGKIDEA 461



 Score =  172 bits (436), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 121/470 (25%), Positives = 225/470 (47%), Gaps = 41/470 (8%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           L KL   +L    L PN  +   L+  Y+ CG+      IF  + +K ++V ++ MI SY
Sbjct: 54  LKKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDK-NVVFFNVMIRSY 112

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
           VN G   DA+ +F  M   GF P+ Y +  V++ACS + N+ +G  I+G ++K G  D +
Sbjct: 113 VNNGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLG-LDMN 171

Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
           + +G  L+ M+ K    L++A +V D+M  ++ V W  M+    Q G   DA++L  +M 
Sbjct: 172 LYIGNGLVSMYGKCKW-LDAARRVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREME 230

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
                PD  T+  ++ A +                           C  V +Y K     
Sbjct: 231 DLKLKPDAGTMGSLLPAVTN------------------------TSCDNV-LYVK----- 260

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
                  +F ++ + +++SW  +I  YV +     EAV L+  M    V P+  + +SVL
Sbjct: 261 ------DMFVKLKEKSLISWNVMIAVYVNN-AMPNEAVDLYLQMQVHGVEPDAVSISSVL 313

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
            ACG+L  + +  +++ +  ++    +  + N+LI MYA+ G +++AR  F+ +  +++V
Sbjct: 314 PACGDLSAAVLGRRIHEYVERKKLRPNLLLENALIDMYAKCGCLKEARAVFDQMMFRDVV 373

Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           S+ +M+ AY  +   + A  L  ++ D+G       F S+L+  S  G + +G      +
Sbjct: 374 SWTSMISAYGMSGQGKDAVALFKKMRDSGFTPDWIAFVSVLAACSHAGLVDEGRYCFNLM 433

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
            + G       YN ++ +  R   ++ A+ + ++M  + N   W S+++ 
Sbjct: 434 AEYGITPGIEHYNCMVDLLGRAGKIDEAYHLTRQMPMEPNERVWGSLLSA 483



 Score =  102 bits (255), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 56/178 (31%), Positives = 96/178 (53%)

Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
           +G  L+  YA  G     R  F+ + +KN+V +N M+ +Y  N   + A  +   + + G
Sbjct: 73  LGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVNNGLYQDALLVFKTMANQG 132

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
                YT+  +L   S  G +  G QIH  ++K G + N  I N L+SMY +C  ++AA 
Sbjct: 133 FYPDNYTYPCVLKACSVSGNLWVGLQIHGAVVKLGLDMNLYIGNGLVSMYGKCKWLDAAR 192

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           +V  EM  R+++SW SM+ G+A++G    AL++  +M    +KP+  T  ++L A ++
Sbjct: 193 RVLDEMPGRDMVSWNSMVAGYAQNGRFNDALKLCREMEDLKLKPDAGTMGSLLPAVTN 250



 Score = 58.9 bits (141), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 102/231 (44%), Gaps = 28/231 (12%)

Query: 509 EQIHARI-IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAK 567
           +++H++I I      N  +   L+  Y+ C        +F E+ D+NV+ +  MI  +  
Sbjct: 55  KKLHSKILIDQNLHPNPSLGIKLMRAYAACGEPCYTRHIFDEITDKNVVFFNVMIRSYVN 114

Query: 568 HGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR-- 625
           +G    AL +F  M   G  P+  TY  VL ACS +G +  G +        HG V +  
Sbjct: 115 NGLYQDALLVFKTMANQGFYPDNYTYPCVLKACSVSGNLWVGLQ-------IHGAVVKLG 167

Query: 626 --MEHYA--CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
             M  Y    +V + G+   L  A   +  MP   D++ W +      V G  + G+   
Sbjct: 168 LDMNLYIGNGLVSMYGKCKWLDAARRVLDEMP-GRDMVSWNSM-----VAGYAQNGRFND 221

Query: 682 EMILEQDPQD----PAAHILLSNLYA----SAGHWEYVANIRKRMKERNLI 724
            + L ++ +D    P A  + S L A    S  +  YV ++  ++KE++LI
Sbjct: 222 ALKLCREMEDLKLKPDAGTMGSLLPAVTNTSCDNVLYVKDMFVKLKEKSLI 272


>gi|449479601|ref|XP_004155648.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g33760-like [Cucumis sativus]
          Length = 663

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 213/560 (38%), Positives = 354/560 (63%), Gaps = 5/560 (0%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +Q+H+  I +GL     +   L+ +   CT  GS+  +R++F  + + +   + +++   
Sbjct: 108 QQVHAHIIVSGLHRSRSLLTKLISLV--CTA-GSITYARRLFPTVPNPDSFLFDSLLK-V 163

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
               G   + V  +  M+      +++TF SV+KAC +L    + +++++H +  G   D
Sbjct: 164 TSKFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGYGSD 223

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             V  +LI++YA++  M+ A+K F+++ ++ ++++N+++  Y +N   +++  L H + +
Sbjct: 224 MYVQAALIALYAKASDMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 283

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
           +G    + T  SLLS  S +GA+  G  +H     +GF+ N  +  +LI+MY+RC NV  
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRCGNVSK 343

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A +VF  M++RNV++WT+MI+G+  HG+  +A+E+F +M A G +PN IT++AVLSAC+H
Sbjct: 344 AREVFDSMKERNVVTWTAMISGYGMHGYGRQAMELFTEMRAYGPRPNNITFVAVLSACAH 403

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS-MPLSADVLVW 661
           +GLI +G + F SM + +G+V  +EH  CMVD+ GR+G L +A +FI+  +P      VW
Sbjct: 404 SGLIDDGRRVFSSMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPKEPGPAVW 463

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            + LGACR+H + +LG   AE +L  +P++P  +++LSN+YA AG  + V  +R  M  R
Sbjct: 464 TSMLGACRMHRNFDLGVKVAEHVLSVEPENPGHYVMLSNIYALAGRMDRVEMVRNMMTRR 523

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
            L K+ G S IE + K + F +G+ SHP+T  IY  LD+L  +  E GY+P    ++H+L
Sbjct: 524 RLKKQVGYSTIEINRKTYLFSMGDKSHPQTNTIYRYLDELMCRCSESGYVPAPESLMHDL 583

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EEE++   L  HSEK+A+AFGL+ T++ + IR+ KNLR+C DCH+AIK+IS++  REI++
Sbjct: 584 EEEERDYALRYHSEKLALAFGLLKTNQGETIRIVKNLRICEDCHSAIKHISIIADREIIV 643

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD  RFHH KDG CSC DYW
Sbjct: 644 RDKFRFHHFKDGSCSCLDYW 663



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/420 (30%), Positives = 222/420 (52%), Gaps = 17/420 (4%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           +   T+S PL      +    + Q+  F   +            +  LL+S  R RN   
Sbjct: 50  VKTTTSSAPLDRNPTMNKIKLQTQQLAFQHPVTRNFDTQSHSPVHEALLRSGPRLRNL-- 107

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
            + VH+ +  S L  +  +L  LISL    G +  A ++F ++ N  D   + S++    
Sbjct: 108 -QQVHAHIIVSGLHRSRSLLTKLISLVCTAGSITYARRLFPTVPNP-DSFLFDSLLKVTS 165

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
             G  +D +  +  ML  G   + Y F++VI+AC++   + +G  I+  ++ CGY  SD+
Sbjct: 166 KFGFSIDTVLFYRRMLFSGAPQSNYTFTSVIKACADLSALRLGKEIHSHVMVCGY-GSDM 224

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  ALI ++ K S D++ A KVFD M ++  + W  +I+   Q G P+++I LF  M+ 
Sbjct: 225 YVQAALIALYAKAS-DMKVAKKVFDAMPQRTIIAWNSLISGYDQNGLPQESIGLFHLMME 283

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           SGF PD  T+  ++S+CS+L     G  LH +A   G  L+V +G SL++MY +C   G+
Sbjct: 284 SGFQPDSATIVSLLSSCSQLGALDFGCWLHDYADGNGFDLNVVLGTSLINMYTRC---GN 340

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           V  +R+VFD M + NV++WTA+I+GY    G  ++A++LF++M      PN+ TF +VL 
Sbjct: 341 VSKAREVFDSMKERNVVTWTAMISGYGMH-GYGRQAMELFTEMRAYGPRPNNITFVAVLS 399

Query: 397 ACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNS--LISMYARSGRMEDARKAFESLFEK 452
           AC +  L+D     +V++ ++K    L   V ++  ++ M+ R+G + DA +  +    K
Sbjct: 400 ACAHSGLIDD--GRRVFS-SMKEAYGLVPGVEHNVCMVDMFGRAGLLNDAYQFIKKFIPK 456


>gi|297611064|ref|NP_001065554.2| Os11g0109600 [Oryza sativa Japonica Group]
 gi|255679703|dbj|BAF27399.2| Os11g0109600 [Oryza sativa Japonica Group]
          Length = 1124

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/582 (37%), Positives = 339/582 (58%), Gaps = 5/582 (0%)

Query: 281  PDRFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            P   T+   + + S L     +G+QLH+ +++     +  V  SL+ +YAKC   G +  
Sbjct: 547  PSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKC---GLLHR 603

Query: 340  SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
            +++VFD M   + + WTA+IT Y+ +G   +EAV +  +     + P+ FT   VL AC 
Sbjct: 604  AQRVFDEMPHPSTVPWTALITAYMDAGDL-REAVHVARNAFANGMRPDSFTAVRVLTACA 662

Query: 400  NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
             + D    E V+  A + G A    V  + + +Y + G M  AR+ F+ +  K+ V++  
Sbjct: 663  RIADLATGETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHKDAVAWGA 722

Query: 460  MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
            MV  YA N +  +A +L   ++  G+    Y  A  LS  + +GA+  G Q    +    
Sbjct: 723  MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 782

Query: 520  FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
            F  N  +  ALI MY++C +   A+ VF++M  +++I W +MI G    G    A  +  
Sbjct: 783  FLDNPVLGTALIDMYAKCGSTVEAWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVG 842

Query: 580  KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
            +M   G+K N  T+I +L +C+H GLI +G ++F +M   + I  R+EHY CMVDLL R+
Sbjct: 843  QMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRA 902

Query: 640  GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
            G L EA + +  MP+ A+ ++    LG C++H +TEL +H  + ++  +P +   +++LS
Sbjct: 903  GLLQEAHQLVDDMPMPANAVILGALLGGCKIHRNTELAEHVLKQLILLEPWNSGNYVMLS 962

Query: 700  NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
            N+Y++ G WE  A +R  MK + + K   CSW+E + KVH+F VG+ SHP + +IY +LD
Sbjct: 963  NIYSNRGRWEDAAKLRLDMKAKGVEKVPACSWVEFEGKVHEFRVGDKSHPLSDQIYKKLD 1022

Query: 760  QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
            +L L++K  GY P T  V+ ++E+E+K   L  HSEK+A+AF L+ T   + IRV KNLR
Sbjct: 1023 ELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLITGPGETIRVTKNLR 1082

Query: 820  VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            VC DCHTAIK +S +T REI++RD+NRFH  +DG CSCNDYW
Sbjct: 1083 VCSDCHTAIKLVSRITHREIIVRDNNRFHCFRDGSCSCNDYW 1124



 Score =  152 bits (385), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 223/490 (45%), Gaps = 58/490 (11%)

Query: 75  HPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEAN 133
           +P   T  + LKS  R       G+ +H+   +     N  +L SL+SLY+KCG L+ A 
Sbjct: 546 NPSHLTIPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVLTSLLSLYAKCGLLHRAQ 605

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F  M +    V W+++I++Y++ G   +A+H+       G  P+ +    V+ AC+  
Sbjct: 606 RVFDEMPHP-STVPWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARI 664

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            ++A G  ++    + G   S V V  A +D++VK   ++  A +VFDKM  K+ V W  
Sbjct: 665 ADLATGETVWRAAEQEGVAQS-VFVATAAVDLYVKCG-EMAKAREVFDKMRHKDAVAWGA 722

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           M+      G PR+A+ LFL M   G  PD + ++G +SAC+ L     G+Q         
Sbjct: 723 MVGGYASNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDE 782

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
              +  +G +L+DMYAKC   GS  ++  VF +M   +++ W A+I G   + G +K A 
Sbjct: 783 FLDNPVLGTALIDMYAKC---GSTVEAWVVFQQMRKKDIIVWNAMILGLGMT-GHEKIAF 838

Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
            L   M +  V  N  TF  +L +C             TH                    
Sbjct: 839 ALVGQMEKSGVKLNDNTFIGLLCSC-------------TH-------------------- 865

Query: 434 ARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
             +G ++D R+ F ++ +   +S     Y  MVD  ++    ++A +L   ++D  +  +
Sbjct: 866 --TGLIQDGRRYFHNMTKLYHISPRIEHYGCMVDLLSRAGLLQEAHQL---VDDMPMPAN 920

Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGF---ESNHCIYNALISMYSRCANVEAAFQ 545
           A    +LL G      I +  ++   ++K        N   Y  L ++YS     E A +
Sbjct: 921 AVILGALLGGCK----IHRNTELAEHVLKQLILLEPWNSGNYVMLSNIYSNRGRWEDAAK 976

Query: 546 VFKEMEDRNV 555
           +  +M+ + V
Sbjct: 977 LRLDMKAKGV 986



 Score =  100 bits (250), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 67/268 (25%), Positives = 127/268 (47%), Gaps = 4/268 (1%)

Query: 37  IAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
           +  P+T  P +  +  +++ G +++A+         G  PD  T   +L +C R  +   
Sbjct: 611 MPHPSTV-PWTALITAYMDAGDLREAVHVARNAFANGMRPDSFTAVRVLTACARIADLAT 669

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           G+ V     +  +  +  +  + + LY KCG++ +A ++F  M +K D V+W +M+  Y 
Sbjct: 670 GETVWRAAEQEGVAQSVFVATAAVDLYVKCGEMAKAREVFDKMRHK-DAVAWGAMVGGYA 728

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           + G   +A+ +F+ M   G  P+ Y  +  + AC+    + +G      +    + D+ V
Sbjct: 729 SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 788

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            +G ALIDM+ K    +E A+ VF +M +K+ + W  MI      G  + A  L   M  
Sbjct: 789 -LGTALIDMYAKCGSTVE-AWVVFQQMRKKDIIVWNAMILGLGMTGHEKIAFALVGQMEK 846

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQ 304
           SG   +  T  G++ +C+   L   G++
Sbjct: 847 SGVKLNDNTFIGLLCSCTHTGLIQDGRR 874



 Score = 63.9 bits (154), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 46/190 (24%), Positives = 92/190 (48%), Gaps = 4/190 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           ++G  ++A+     M  +G  PD    +  L +C R     LG+    ++   +   N V
Sbjct: 729 SNGHPREALDLFLAMQAEGMKPDCYAVAGALSACTRLGALDLGRQAIRMVDWDEFLDNPV 788

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +LI +Y+KCG   EA  +F+ M  K+DI+ W++MI      G +  A  +  +M + 
Sbjct: 789 LGTALIDMYAKCGSTVEAWVVFQQM-RKKDIIVWNAMILGLGMTGHEKIAFALVGQMEKS 847

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV-CVGCALIDMFVKGSVDL 233
           G   N+  F  ++ +C++T  +  G   +  + K  +    +   GC ++D+  +  + L
Sbjct: 848 GVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPRIEHYGC-MVDLLSRAGL-L 905

Query: 234 ESAYKVFDKM 243
           + A+++ D M
Sbjct: 906 QEAHQLVDDM 915


>gi|297795617|ref|XP_002865693.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297311528|gb|EFH41952.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 640

 Score =  431 bits (1107), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 238/608 (39%), Positives = 350/608 (57%), Gaps = 51/608 (8%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-GSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           Q+H+  I++G   D      ++   A   +    +D + K+F++M   N  SW  II G+
Sbjct: 34  QIHAVFIKSGQIRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 93

Query: 363 VQSGGRDKE--AVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
            +S   DK   A+ LF +M+  + + PN FTF SVLKAC         +Q++  A+K G 
Sbjct: 94  SESD-EDKALIAITLFCEMMSDEFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGF 152

Query: 420 ALDDCVGNSLISMYARSGRMEDA------------------------------------- 442
             D+ V ++L+ MY   G M+DA                                     
Sbjct: 153 GGDEFVMSNLVRMYVICGLMKDACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYM 212

Query: 443 --------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED-TGVGTSAYTFA 493
                   R  F+ + ++++VS+NTM+  Y++N   + A E+  E++    +  +  T  
Sbjct: 213 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSQNGFFKDAVEVFREMKKGEDIRPNYVTLV 272

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
           S+L   S +G++  GE +H     SG   +  + +ALI MYS+C  +E A  VF+ +   
Sbjct: 273 SVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRE 332

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           NVI+W++MI GFA HG A  A++ F KM   G++P+ + YI +L+ACSHAGL+ EG ++F
Sbjct: 333 NVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYF 392

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M    G+  R+EHY CMVDLLGR G L EA EFI +MP+  D ++W+  LGACR+H +
Sbjct: 393 SQMVSVDGLEPRIEHYGCMVDLLGRLGLLDEAEEFILNMPIKPDDVIWKALLGACRMHRN 452

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
            E+GK  A ++++  P D  A++ LSN+YAS G+W  V+ +R RMKE ++ K+ GCSWI+
Sbjct: 453 VEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEMDIRKDPGCSWID 512

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
            D  +H+F V + SHP+  EI + L +++ K++  GY P T  VL  LEEE K   L  H
Sbjct: 513 IDGVLHEFLVEDDSHPRAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENALHYH 572

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A AFGLISTS  KPIR+ KNLR+C DCH++IK IS V  R+I +RD  RFHH +DG
Sbjct: 573 SEKMATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDG 632

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 633 SCSCMDYW 640



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 171/343 (49%), Gaps = 50/343 (14%)

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRD--AIRLFLDMILS 277
           CA  D+  +   DL+ A+K+F++M ++N   W  +I   ++    +   AI LF +M+  
Sbjct: 58  CATSDLHHR---DLDYAHKIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSD 114

Query: 278 GFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV--- 333
            F+ P+RFT   V+ AC++      GKQ+H  A++ G   D  V  +LV MY  C +   
Sbjct: 115 EFIEPNRFTFPSVLKACAKTGKIQQGKQIHGLALKYGFGGDEFVMSNLVRMYVICGLMKD 174

Query: 334 -----------------------DGSV----------------DDSRKVFDRMLDHNVMS 354
                                  DG V                  +R +FD+M   +V+S
Sbjct: 175 ACVLFYKNIIEREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVS 234

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTH 413
           W  +I+GY Q+G   K+AV++F +M +G+ + PN+ T  SVL A   L    + E ++ +
Sbjct: 235 WNTMISGYSQNGFF-KDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLY 293

Query: 414 AVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKA 473
           A   G  +DD +G++LI MY++ G +E A   FE L  +N+++++ M++ +A +  +  A
Sbjct: 294 AEDSGIRIDDVLGSALIDMYSKCGIIEKAIMVFERLPRENVITWSAMINGFAIHGQAGDA 353

Query: 474 FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
            +   ++   GV  S   + +LL+  S  G + +G +  ++++
Sbjct: 354 IDCFCKMRQAGVRPSDVAYINLLTACSHAGLVEEGRRYFSQMV 396



 Score =  130 bits (326), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 95/321 (29%), Positives = 157/321 (48%), Gaps = 54/321 (16%)

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYV--NRGKQVDAIHMFVEMLELGFC-PNEYCFS 184
           DL+ A+KIF  M  +R+  SW+++I  +   +  K + AI +F EM+   F  PN + F 
Sbjct: 67  DLDYAHKIFNQMP-QRNCFSWNTIIRGFSESDEDKALIAITLFCEMMSDEFIEPNRFTFP 125

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV----------------- 227
           +V++AC+ T  +  G  I+G  LK G F  D  V   L+ M+V                 
Sbjct: 126 SVLKACAKTGKIQQGKQIHGLALKYG-FGGDEFVMSNLVRMYVICGLMKDACVLFYKNII 184

Query: 228 -------------KGSV--------------DLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
                         G V              D ++A  +FDKM +++ V W  MI+  +Q
Sbjct: 185 EREMVMMIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKMRQRSVVSWNTMISGYSQ 244

Query: 261 LGCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
            G  +DA+ +F +M       P+  TL  V+ A S L     G+ LH +A  +G+ +D  
Sbjct: 245 NGFFKDAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDV 304

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +G +L+DMY+KC   G ++ +  VF+R+   NV++W+A+I G+    G+  +A+  F  M
Sbjct: 305 LGSALIDMYSKC---GIIEKAIMVFERLPRENVITWSAMINGFAIH-GQAGDAIDCFCKM 360

Query: 380 IQGQVAPNHFTFASVLKACGN 400
            Q  V P+   + ++L AC +
Sbjct: 361 RQAGVRPSDVAYINLLTACSH 381



 Score = 91.7 bits (226), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 63/206 (30%), Positives = 101/206 (49%), Gaps = 4/206 (1%)

Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
           ++ R K +   V+ N +I  Y + GD   A  +F  M  +R +VSW++MIS Y   G   
Sbjct: 191 MIDRRKRDGEVVLWNVMIDGYMRLGDCKAARMLFDKM-RQRSVVSWNTMISGYSQNGFFK 249

Query: 163 DAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
           DA+ +F EM +     PN     +V+ A S   ++ +G  ++ +    G    DV +G A
Sbjct: 250 DAVEVFREMKKGEDIRPNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDV-LGSA 308

Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
           LIDM+ K  + +E A  VF+++  +N + W+ MI      G   DAI  F  M  +G  P
Sbjct: 309 LIDMYSKCGI-IEKAIMVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRP 367

Query: 282 DRFTLSGVVSACSELELFTSGKQLHS 307
                  +++ACS   L   G++  S
Sbjct: 368 SDVAYINLLTACSHAGLVEEGRRYFS 393



 Score = 63.2 bits (152), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 69/124 (55%), Gaps = 1/124 (0%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T   +L +  R  +  LG+ +H     S +  + V+ ++LI +YSKCG + +A  +
Sbjct: 266 PNYVTLVSVLPAVSRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIMV 325

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ +  + ++++WS+MI+ +   G+  DAI  F +M + G  P++  +  ++ ACS+   
Sbjct: 326 FERLP-RENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHAGL 384

Query: 196 VAIG 199
           V  G
Sbjct: 385 VEEG 388


>gi|125543632|gb|EAY89771.1| hypothetical protein OsI_11313 [Oryza sativa Indica Group]
          Length = 798

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/748 (33%), Positives = 406/748 (54%), Gaps = 65/748 (8%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+ I+  ++ G++  A   F++M   R   S++++++ Y        A+ +F  M     
Sbjct: 21  NARIAHLARAGNIEGARAAFEAM-PLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL 79

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
                  S +        + A         L    F   V    +L+  +V+  + L  A
Sbjct: 80  ASYNALISGLSLRRQTLPDAAAA-------LASIPFPPSVVSFTSLLRGYVRHGL-LADA 131

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR--FTLSGVVSACS 294
            ++F +M E+N V +T+++      G   +A RLF +M      PDR     + ++S   
Sbjct: 132 IRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDRDVVAWTAMLSGYC 185

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           +    T  + L     +     +V    +++  YA+   +G V+ +RK+F+ M + N +S
Sbjct: 186 QAGRITEARALFDEMPKR----NVVSWTAMISGYAQ---NGEVNLARKLFEVMPERNEVS 238

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA++ GY+Q+G   ++A +LF+ M +  VA           AC                
Sbjct: 239 WTAMLVGYIQAG-HVEDAAELFNAMPEHPVA-----------AC---------------- 270

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                       N+++  + + G ++ A+  FE + E++  +++ M+ AY +N    +A 
Sbjct: 271 ------------NAMMVGFGQRGMVDAAKTVFEKMRERDDGTWSAMIKAYEQNEFLMEAL 318

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               E+   GV  +  +  S+L+  +++  +  G ++HA +++  F+ +    +ALI+MY
Sbjct: 319 STFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY 378

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C N++ A +VF   E ++++ W SMITG+A+HG   +AL IF+ M   G+ P+GITYI
Sbjct: 379 IKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYI 438

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
             L+ACS+ G + EG + F SM     I    EHY+CMVDLLGRSG + EA + I++MP+
Sbjct: 439 GALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPV 498

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D ++W   +GACR+H + E+ + AA+ +LE +P +   ++LLS++Y S G WE  + +
Sbjct: 499 EPDAVIWGALMGACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKM 558

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPD 773
           RK +  RNL K  GCSWIE D +VH F  G+  +HP+   I   L++L   + E GY  D
Sbjct: 559 RKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSAD 618

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +FVLH+++EEQK   L  HSE+ AVA+GL+   +  PIRV KNLRVCGDCH+AIK I+ 
Sbjct: 619 GSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAK 678

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T REIVLRD+NRFHH KDG CSC DYW
Sbjct: 679 ITSREIVLRDANRFHHFKDGFCSCRDYW 706



 Score =  132 bits (331), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 242/537 (45%), Gaps = 68/537 (12%)

Query: 25  RQNLPPSS----SPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDT 80
           RQ LP ++    S PF   P +    ++ L  ++  G +  AI     M ++ NH    +
Sbjct: 93  RQTLPDAAAALASIPF---PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER-NH---VS 145

Query: 81  YSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           Y++LL   + + R     +L   +  R     + V   +++S Y + G + EA  +F  M
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPDR-----DVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             KR++VSW++MIS Y   G+   A  +F  M E     NE  ++A++        +  G
Sbjct: 201 -PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAML-----VGYIQAG 250

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           H+     L     +  V    A++  F  +G VD  +A  VF+KM E++   W+ MI   
Sbjct: 251 HVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVD--AAKTVFEKMRERDDGTWSAMIKAY 308

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q     +A+  F +M+  G  P+  ++  +++ C+ L +   G+++H+  +R    +DV
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDV 368

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
               +L+ MY KC   G++D +++VF      +++ W ++ITGY Q  G  ++A+ +F D
Sbjct: 369 FAVSALITMYIKC---GNLDKAKRVFHTFEPKDIVMWNSMITGYAQH-GLGEQALGIFHD 424

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    ++P+  T+   L AC            YT  VK GR     + NS+         
Sbjct: 425 MRLAGMSPDGITYIGALTACS-----------YTGKVKEGRE----IFNSM--------- 460

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
                    S        Y+ MVD   ++   E+AF+L   I++  V   A  + +L+ G
Sbjct: 461 ------TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL---IKNMPVEPDAVIWGALM-G 510

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           A  +    +  ++ A+ +      N   Y  L  +Y+     E A ++ K +  RN+
Sbjct: 511 ACRMHRNAEIAEVAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567


>gi|225464414|ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g04780-like [Vitis vinifera]
          Length = 594

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 223/560 (39%), Positives = 348/560 (62%), Gaps = 4/560 (0%)

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G   H+  IR GL  D      L++MY+KC   G V+ +RK+FD M   +++SW  ++  
Sbjct: 39  GMACHAQIIRVGLRADTITSNMLMNMYSKC---GLVESARKLFDEMPVRSLVSWNTMVGS 95

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
           + Q+G  +K A+ LF  M +   + + FT +SV+ AC         +Q++  A+K     
Sbjct: 96  HTQNGDCEK-ALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDS 154

Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
           +  VG +L+ +YA+ G ++DA   FE + E++ V++++MV  Y +N   E+A  L H  +
Sbjct: 155 NVFVGTALLDVYAKCGLVKDANLVFECMPERSDVTWSSMVAGYVQNELYEEALVLFHRAQ 214

Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
             G+  + +T +S LS  ++  A+ +G+Q+ A   K+G  SN  + ++LI MY++C  +E
Sbjct: 215 AMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIE 274

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            A+ VF  +E++NV+ W ++++GF++H  +  A+  F KM   GI PN ITYI+VLSACS
Sbjct: 275 EAYTVFSSVEEKNVVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACS 334

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H GL+ +G K+F  M   H +   + HY+CMVD+LGR+G L EA +FI  MP  A   +W
Sbjct: 335 HLGLVEKGRKYFDLMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMW 394

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
            + L +CR++ + EL + AA+ + E +P +   H+LLSN+YA+   WE VA  R  +KE 
Sbjct: 395 GSLLASCRIYRNLELAEVAAKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKES 454

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
              KE G SWIE  +KVH F VGE +HP+ +EIY +L+ L  ++K+ GY   T   LH++
Sbjct: 455 KAKKERGKSWIEIKHKVHSFMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDV 514

Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
           EE +K + L  HSEK+A+ FG++      PIR+ KNLR+CGDCH+ +K  S +T REI++
Sbjct: 515 EESRKQELLRHHSEKLALTFGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIV 574

Query: 842 RDSNRFHHIKDGKCSCNDYW 861
           RD+NRFHH K+G CSC ++W
Sbjct: 575 RDTNRFHHFKNGYCSCGEFW 594



 Score =  158 bits (399), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/318 (33%), Positives = 178/318 (55%), Gaps = 7/318 (2%)

Query: 84  LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
           LL+S  R+R    G   H+ + R  L  +++  N L+++YSKCG +  A K+F  M   R
Sbjct: 26  LLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARKLFDEMP-VR 84

Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
            +VSW++M+ S+   G    A+ +F++M + G   +E+  S+V+ AC+    V     ++
Sbjct: 85  SLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCCVFECKQLH 144

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
           GF LK    DS+V VG AL+D++ K  + ++ A  VF+ M E++ V W+ M+    Q   
Sbjct: 145 GFALKTA-LDSNVFVGTALLDVYAKCGL-VKDANLVFECMPERSDVTWSSMVAGYVQNEL 202

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
             +A+ LF      G   ++FT+S  +SAC+       GKQ+ + + +TG+  ++ V  S
Sbjct: 203 YEEALVLFHRAQAMGLEHNQFTISSALSACAARAALIEGKQVQAVSCKTGIGSNIFVISS 262

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMYAKC   G ++++  VF  + + NV+ W AI++G+ +   R  EA+  F  M Q  
Sbjct: 263 LIDMYAKC---GIIEEAYTVFSSVEEKNVVLWNAILSGFSRH-VRSLEAMIYFEKMQQMG 318

Query: 384 VAPNHFTFASVLKACGNL 401
           + PN  T+ SVL AC +L
Sbjct: 319 ICPNDITYISVLSACSHL 336



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 108/352 (30%), Positives = 182/352 (51%), Gaps = 7/352 (1%)

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +D      L++M+ K  + +ESA K+FD+M  ++ V W  M+   TQ G    A+ LF+ 
Sbjct: 53  ADTITSNMLMNMYSKCGL-VESARKLFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQ 111

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G     FT+S VV AC+        KQLH +A++T L  +V VG +L+D+YAKC  
Sbjct: 112 MQKEGTSCSEFTVSSVVCACAAKCCVFECKQLHGFALKTALDSNVFVGTALLDVYAKC-- 169

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G V D+  VF+ M + + ++W++++ GYVQ+   + EA+ LF       +  N FT +S
Sbjct: 170 -GLVKDANLVFECMPERSDVTWSSMVAGYVQNELYE-EALVLFHRAQAMGLEHNQFTISS 227

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
            L AC         +QV   + K G   +  V +SLI MYA+ G +E+A   F S+ EKN
Sbjct: 228 ALSACAARAALIEGKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSVEEKN 287

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           +V +N ++  +++++ S +A     +++  G+  +  T+ S+LS  S +G + KG +   
Sbjct: 288 VVLWNAILSGFSRHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFD 347

Query: 514 RIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMIT 563
            +I+      N   Y+ ++ +  R   +  A      M  D     W S++ 
Sbjct: 348 LMIRVHNVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLA 399



 Score = 72.8 bits (177), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/163 (24%), Positives = 87/163 (53%), Gaps = 3/163 (1%)

Query: 97  GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
           GK V ++  ++ +  N  +++SLI +Y+KCG + EA  +F S+  ++++V W++++S + 
Sbjct: 241 GKQVQAVSCKTGIGSNIFVISSLIDMYAKCGIIEEAYTVFSSV-EEKNVVLWNAILSGFS 299

Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
              + ++A+  F +M ++G CPN+  + +V+ ACS+   V  G   +  +++      +V
Sbjct: 300 RHVRSLEAMIYFEKMQQMGICPNDITYISVLSACSHLGLVEKGRKYFDLMIRVHNVSPNV 359

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
                ++D+  +  + L  A    D+M    T   W  ++  C
Sbjct: 360 LHYSCMVDILGRAGL-LHEAKDFIDRMPFDATASMWGSLLASC 401



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 46/182 (25%), Positives = 87/182 (47%), Gaps = 2/182 (1%)

Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
            T       LL  ++   A  +G   HA+II+ G  ++    N L++MYS+C  VE+A +
Sbjct: 17  ATHVSELQHLLQSSARNRAAIEGMACHAQIIRVGLRADTITSNMLMNMYSKCGLVESARK 76

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           +F EM  R+++SW +M+    ++G   +AL +F +M  +G   +  T  +V+ AC+    
Sbjct: 77  LFDEMPVRSLVSWNTMVGSHTQNGDCEKALVLFMQMQKEGTSCSEFTVSSVVCACAAKCC 136

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           + E  K       +  +   +     ++D+  + G + +A      MP  +DV  W + +
Sbjct: 137 VFEC-KQLHGFALKTALDSNVFVGTALLDVYAKCGLVKDANLVFECMPERSDV-TWSSMV 194

Query: 666 GA 667
             
Sbjct: 195 AG 196


>gi|108707831|gb|ABF95626.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
 gi|125586055|gb|EAZ26719.1| hypothetical protein OsJ_10627 [Oryza sativa Japonica Group]
          Length = 798

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/748 (33%), Positives = 406/748 (54%), Gaps = 65/748 (8%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+ I+  ++ G++  A   F++M   R   S++++++ Y        A+ +F  M     
Sbjct: 21  NARIAHLARAGNIEGARAAFEAM-PLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL 79

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
                  S +        + A         L    F   V    +L+  +V+  + L  A
Sbjct: 80  ASYNALISGLSLRRQTLPDAAAA-------LASIPFPPSVVSFTSLLRGYVRHGL-LADA 131

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR--FTLSGVVSACS 294
            ++F +M E+N V +T+++      G   +A RLF +M      PDR     + ++S   
Sbjct: 132 IRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDRDVVAWTAMLSGYC 185

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           +    T  + L     +     +V    +++  YA+   +G V+ +RK+F+ M + N +S
Sbjct: 186 QAGRITEARALFDEMPKR----NVVSWTAMISGYAQ---NGEVNLARKLFEVMPERNEVS 238

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA++ GY+Q+G   ++A +LF+ M +  VA           AC                
Sbjct: 239 WTAMLVGYIQAG-HVEDAAELFNAMPEHPVA-----------AC---------------- 270

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                       N+++  + + G ++ A+  FE + E++  +++ M+ AY +N    +A 
Sbjct: 271 ------------NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEAL 318

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               E+   GV  +  +  S+L+  +++  +  G ++HA +++  F+ +    +ALI+MY
Sbjct: 319 STFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY 378

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C N++ A +VF   E ++++ W SMITG+A+HG   +AL IF+ M   G+ P+GITYI
Sbjct: 379 IKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYI 438

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
             L+ACS+ G + EG + F SM     I    EHY+CMVDLLGRSG + EA + I++MP+
Sbjct: 439 GALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPV 498

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D ++W   +GACR+H + E+ + AA+ +LE +P +   ++LLS++Y S G WE  + +
Sbjct: 499 EPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKM 558

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPD 773
           RK +  RNL K  GCSWIE D +VH F  G+  +HP+   I   L++L   + E GY  D
Sbjct: 559 RKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSAD 618

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +FVLH+++EEQK   L  HSE+ AVA+GL+   +  PIRV KNLRVCGDCH+AIK I+ 
Sbjct: 619 GSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAK 678

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T REI+LRD+NRFHH KDG CSC DYW
Sbjct: 679 ITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  130 bits (327), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 135/537 (25%), Positives = 241/537 (44%), Gaps = 68/537 (12%)

Query: 25  RQNLPPSS----SPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDT 80
           RQ LP ++    S PF   P +    ++ L  ++  G +  AI     M ++ NH    +
Sbjct: 93  RQTLPDAAAALASIPF---PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER-NH---VS 145

Query: 81  YSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           Y++LL   + + R     +L   +  R     + V   +++S Y + G + EA  +F  M
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMPDR-----DVVAWTAMLSGYCQAGRITEARALFDEM 200

Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             KR++VSW++MIS Y   G+   A  +F  M E     NE  ++A++        +  G
Sbjct: 201 -PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAML-----VGYIQAG 250

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           H+     L     +  V    A++  F  +G VD  +A  VF+KM E++   W+ MI   
Sbjct: 251 HVEDAAELFNAMPEHPVAACNAMMVGFGQRGMVD--AAKTVFEKMCERDDGTWSAMIKAY 308

Query: 259 TQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            Q     +A+  F +M+  G  P+  ++  +++ C+ L +   G+++H+  +R    +DV
Sbjct: 309 EQNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDV 368

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
               +L+ MY KC   G++D +++VF      +++ W ++ITGY Q  G  ++A+ +F D
Sbjct: 369 FAVSALITMYIKC---GNLDKAKRVFHTFEPKDIVMWNSMITGYAQH-GLGEQALGIFHD 424

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           M    ++P+  T+   L AC            YT  VK GR     + NS+         
Sbjct: 425 MRLAGMSPDGITYIGALTACS-----------YTGKVKEGRE----IFNSM--------- 460

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
                    S        Y+ MVD   ++   E+AF+L   I++  V   A  + +L+ G
Sbjct: 461 ------TVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDL---IKNMPVEPDAVIWGALM-G 510

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           A  +    +  +  A+ +      N   Y  L  +Y+     E A ++ K +  RN+
Sbjct: 511 ACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKMRKFISSRNL 567


>gi|242096366|ref|XP_002438673.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
 gi|241916896|gb|EER90040.1| hypothetical protein SORBIDRAFT_10g024090 [Sorghum bicolor]
          Length = 588

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/572 (37%), Positives = 342/572 (59%), Gaps = 25/572 (4%)

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++ C E      G+Q+H+  +  G    + +   LV MYA+C   G+++D+R V D M +
Sbjct: 42  ITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARC---GALEDARNVLDGMPE 98

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV+SWTA+I+GY Q+  R  +A +LF  M++  +                    +  +Q
Sbjct: 99  RNVVSWTAMISGYSQNE-RPDQAWELFIMMLRAGI--------------------HQVKQ 137

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+  AVK    L   VG+SL+ MYA+S  +++AR+ F+ L  +++VSY  ++  Y +   
Sbjct: 138 VHAFAVKTNFELHMFVGSSLLDMYAKSENIQEARRVFDMLPARDVVSYTAILSGYTQLGL 197

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E+A +L   + + G+  +  TF +LL+  S + ++  G+Q+H  I++        + N+
Sbjct: 198 DEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQNS 257

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MYS+C  +  + +VF  M +R+V+SW +M+ G+ +HG A   +++F  M  D +KP+
Sbjct: 258 LIDMYSKCGKLLYSRRVFDSMPERSVVSWNAMLMGYGRHGLAHEVVQLFRSM-CDEVKPD 316

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T +AVLS  SH GL+ EG   F  +  E   +   EHY C++DLLGRSG L +AL  I
Sbjct: 317 SVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGCVIDLLGRSGQLQKALNLI 376

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
             MP      +W + LGACRVH +  +G+  A+ +L+ +P++   +++LSN+YA+AG W+
Sbjct: 377 EKMPFQPTRAIWGSLLGACRVHTNVHVGEFVAQKLLDIEPENAGNYVILSNIYAAAGMWK 436

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V  +RK M ++ +IKE G SW+  D  +H FH  E  HP+  +I A++ ++ + IK  G
Sbjct: 437 DVFRVRKLMLKKTVIKEPGRSWMILDKVIHTFHSCERFHPRKEDINAKIKEIYVAIKAAG 496

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           ++PD + VLH++++EQK + L  HSEK+A+ FGL+ST     I+V KNLR+C DCH   K
Sbjct: 497 FVPDLSCVLHDVDDEQKERMLLGHSEKLAITFGLMSTPSDLTIQVMKNLRICVDCHNFAK 556

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           ++S V GREI LRD NRFH I +G C+C DYW
Sbjct: 557 FVSKVYGREISLRDKNRFHLITEGACTCGDYW 588



 Score =  149 bits (377), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 109/391 (27%), Positives = 192/391 (49%), Gaps = 42/391 (10%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y   +  C+  R    G+ VH+ +  +   P   +   L+ +Y++CG L +A  +   M 
Sbjct: 38  YDDAITECVERRALREGRQVHARMVAAGYRPALYLATRLVIMYARCGALEDARNVLDGM- 96

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            +R++VSW++MIS Y    +   A  +F+ ML  G    +                    
Sbjct: 97  PERNVVSWTAMISGYSQNERPDQAWELFIMMLRAGIHQVKQ------------------- 137

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++ F +K   F+  + VG +L+DM+ K S +++ A +VFD +  ++ V +T +++  TQ
Sbjct: 138 -VHAFAVKTN-FELHMFVGSSLLDMYAK-SENIQEARRVFDMLPARDVVSYTAILSGYTQ 194

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
           LG   +A+ LF  +   G   ++ T + +++A S L     GKQ+H   +R  L   + +
Sbjct: 195 LGLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMAL 254

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             SL+DMY+KC   G +  SR+VFD M + +V+SW A++ GY +  G   E V+LF  M 
Sbjct: 255 QNSLIDMYSKC---GKLLYSRRVFDSMPERSVVSWNAMLMGYGRH-GLAHEVVQLFRSMC 310

Query: 381 QGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDD-----CVGNSLISMY 433
             +V P+  T  +VL     G L+D  +   ++ H VK    L +     CV    I + 
Sbjct: 311 D-EVKPDSVTLLAVLSGYSHGGLVDEGL--DMFDHIVKEQSTLLNTEHYGCV----IDLL 363

Query: 434 ARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            RSG+++ A    E + F+     + +++ A
Sbjct: 364 GRSGQLQKALNLIEKMPFQPTRAIWGSLLGA 394



 Score = 61.6 bits (148), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 55/204 (26%), Positives = 98/204 (48%), Gaps = 6/204 (2%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G  ++A+    L+  +G   +  T++ LL +     +   GK VH L+ R +L     + 
Sbjct: 196 GLDEEALDLFRLLYNEGMQCNQVTFTALLNALSGLSSMDYGKQVHGLILRRELPFFMALQ 255

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           NSLI +YSKCG L  + ++F SM  +R +VSW++M+  Y   G   + + +F  M +   
Sbjct: 256 NSLIDMYSKCGKLLYSRRVFDSM-PERSVVSWNAMLMGYGRHGLAHEVVQLFRSMCD-EV 313

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLES 235
            P+     AV+   S+   V  G  ++  ++K      +    GC +ID+  + S  L+ 
Sbjct: 314 KPDSVTLLAVLSGYSHGGLVDEGLDMFDHIVKEQSTLLNTEHYGC-VIDLLGR-SGQLQK 371

Query: 236 AYKVFDKMTEKNTVG-WTLMITRC 258
           A  + +KM  + T   W  ++  C
Sbjct: 372 ALNLIEKMPFQPTRAIWGSLLGAC 395


>gi|296080932|emb|CBI18728.3| unnamed protein product [Vitis vinifera]
          Length = 607

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/561 (38%), Positives = 354/561 (63%), Gaps = 8/561 (1%)

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  IR G + D  +   L+   +KC    ++D + ++F    + NV  +TA+I G+V 
Sbjct: 51  IHAQLIRNGHSQDPFMVFELLRSCSKCH---AIDYASRIFQYTHNPNVYLYTALIDGFVS 107

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           SG    +A++L+S M+   + P+++  AS+LKACG+ L      +V++ A+K G + +  
Sbjct: 108 SGNY-FDAIQLYSRMLHDSILPDNYLMASILKACGSQLALREGREVHSRALKLGLSSNRL 166

Query: 425 VGNSLISMYARSGRMEDARKAFESLFE----KNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           V   ++ +Y + G + DAR+ FE + E    K+ V +  M+D + +N    +A E    +
Sbjct: 167 VRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGM 226

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +   V  + +T   +LS  S +GA+  G  +H+ + K   E N  + NALI+MYSRC ++
Sbjct: 227 QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSI 286

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  VF EM+DR+VI++ +MI+G + +G + +A+E+F  M+   ++P  +T++ VL+AC
Sbjct: 287 DEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNAC 346

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SH GL+  G+K F SM  ++G+  ++EHY CMVDLLGR G L EA + IR+M ++ D ++
Sbjct: 347 SHGGLVDFGFKIFHSMTRDYGVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIM 406

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
             T L AC++H + ELG+  A+++ ++   D   ++LLS++YAS+G W+  A +R +MKE
Sbjct: 407 LGTLLSACKMHKNLELGEQVAKVLEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 466

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             + KE GCS IE +N++H+F +G+  HP+   IY +L++L   ++  GY P+   VL +
Sbjct: 467 AGMQKEPGCSSIEVNNEIHEFLLGDLRHPRKERIYEKLEELNRLLRLEGYHPEKEVVLQD 526

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +E+ +K   L  HSE++A+ +GLIST     IRV KNLRVC DCH+AIK I+ +T R++V
Sbjct: 527 IEDGEKEWALAIHSERLAICYGLISTEPCTVIRVMKNLRVCYDCHSAIKLIAKITRRKVV 586

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD NRFH+ ++G CSC DYW
Sbjct: 587 VRDRNRFHYFENGACSCGDYW 607



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 121/465 (26%), Positives = 243/465 (52%), Gaps = 29/465 (6%)

Query: 75  HPDLDTYSLLLKS-------CIRSRNFHLGKL--VHSLLTRSKLEPNSVILNSLISLYSK 125
           HP+ ++    LKS        +  R+ H+ ++  +H+ L R+    +  ++  L+   SK
Sbjct: 17  HPNSNSNPKSLKSLDQKQIISLLQRSKHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSK 76

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           C  ++ A++IF+   N  ++  ++++I  +V+ G   DAI ++  ML     P+ Y  ++
Sbjct: 77  CHAIDYASRIFQYTHNP-NVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMAS 135

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++AC +   +  G  ++   LK G   S+  V   +++++ K   +L  A +VF++M E
Sbjct: 136 ILKACGSQLALREGREVHSRALKLG-LSSNRLVRLRIMELYGKCG-ELGDARRVFEEMPE 193

Query: 246 ----KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
               K+TV WT MI    +      A+  F  M      P+ FT+  V+SACS+L     
Sbjct: 194 DVVAKDTVCWTAMIDGFVRNEEMNRALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEI 253

Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
           G+ +HS+  +  + L++ VG +L++MY++C   GS+D+++ VFD M D +V+++  +I+G
Sbjct: 254 GRWVHSYMRKFEIELNLFVGNALINMYSRC---GSIDEAQTVFDEMKDRDVITYNTMISG 310

Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGR 419
            +   G+ ++A++LF  MI  ++ P + TF  VL AC  G L+D     +++ H++ R  
Sbjct: 311 -LSMNGKSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGF--KIF-HSMTRDY 366

Query: 420 ALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            ++  + +   ++ +  R GR+E+A     ++    + +   T++ A   + N E   ++
Sbjct: 367 GVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQV 426

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
              +ED G   S  T+  L    +S G   +  Q+ A++ ++G +
Sbjct: 427 AKVLEDRGQADSG-TYVLLSHVYASSGKWKEAAQVRAKMKEAGMQ 470



 Score =  149 bits (375), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 89/324 (27%), Positives = 168/324 (51%), Gaps = 9/324 (2%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A ++F      N   +T +I      G   DAI+L+  M+    LPD + ++ ++ A
Sbjct: 80  IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYFDAIQLYSRMLHDSILPDNYLMASILKA 139

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM----L 348
           C        G+++HS A++ GL+ +  V   ++++Y KC   G + D+R+VF+ M    +
Sbjct: 140 CGSQLALREGREVHSRALKLGLSSNRLVRLRIMELYGKC---GELGDARRVFEEMPEDVV 196

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             + + WTA+I G+V++   ++ A++ F  M    V PN FT   VL AC  L    +  
Sbjct: 197 AKDTVCWTAMIDGFVRNEEMNR-ALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR 255

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+++  K    L+  VGN+LI+MY+R G +++A+  F+ + ++++++YNTM+   + N 
Sbjct: 256 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 315

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI-HARIIKSGFESNHCIY 527
            S +A EL   +    +  +  TF  +L+  S  G +  G +I H+     G E     Y
Sbjct: 316 KSRQAIELFRVMIGRRLRPTNVTFVGVLNACSHGGLVDFGFKIFHSMTRDYGVEPQIEHY 375

Query: 528 NALISMYSRCANVEAAFQVFKEME 551
             ++ +  R   +E A+ + + M+
Sbjct: 376 GCMVDLLGRVGRLEEAYDLIRTMK 399


>gi|449458017|ref|XP_004146744.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g49142-like [Cucumis sativus]
          Length = 678

 Score =  430 bits (1106), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/627 (37%), Positives = 339/627 (54%), Gaps = 73/627 (11%)

Query: 304 QLHS-WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           +LHS   I   L +D  +   L+  Y   +  G    +R +FDR L+ NV+ +  +I  Y
Sbjct: 56  KLHSKIVINEHLRIDPTLAIKLMRAY---SAQGETSVARYIFDRSLEKNVVFFNVMIRSY 112

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           V +     EA+ +F  M+     P+H+TF  VLKAC  L +  V  QV+   VK G   +
Sbjct: 113 VNNNLY-VEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171

Query: 423 DCVGNSLISMY-------------------------------ARSGRMEDA--------- 442
             +GN+L++MY                               A+SG+ +DA         
Sbjct: 172 LFIGNALVAMYGKCGCLREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEMDS 231

Query: 443 ----------------------------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                                          FE + +KNL+S+N M+  Y  N    +A 
Sbjct: 232 LNLNHDAGTMASLSPVVCYTSLENVQYIHNMFERMTKKNLISWNVMIAIYVNNSMPNEAV 291

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L  ++E+ G+   A T ASLL     + A+  G ++H  I K     N  + NAL+ MY
Sbjct: 292 SLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMY 351

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C  +E A  VF +M  R+V+SWTSM++ + + G    A+ +F KML  G  P+ I ++
Sbjct: 352 AKCGCLEEARDVFDKMRLRDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFV 411

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
           +VLSACSH GL+ +G  +FR M +++GIV R+EH+ACMVDL GR+G + EA  FI+ MP+
Sbjct: 412 SVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPM 471

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             +  VW   L ACRVH   ++G  AA+++ +  P+    ++LLSN+YA AG W+ V N+
Sbjct: 472 EPNERVWGALLSACRVHSKMDIGLVAADLLFQLAPKQSGYYVLLSNIYAKAGMWKDVMNV 531

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           R  MK+  + K  G S +E + +VH F  G+  HP+   IY ELD L  K+KE GY+P T
Sbjct: 532 RYAMKKIGIKKVPGISNVELNGQVHTFLAGDQYHPQAKNIYGELDVLVGKMKELGYIPQT 591

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
              LH++E E K  +L  HSEK+A+ F +++T +  PIR+ KNLRVCGDCH AIK IS +
Sbjct: 592 ESALHDVEVEDKECHLAIHSEKLAIVFAILNTKQGTPIRITKNLRVCGDCHIAIKLISKI 651

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
             R I++RD NRFHH  +G CSC DYW
Sbjct: 652 VSRNIIVRDCNRFHHFSNGICSCGDYW 678



 Score =  163 bits (412), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 178/356 (50%), Gaps = 46/356 (12%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+    +A+    +M     +PD  T+  +LK+C    N  +G  VH  + +  L+ N
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVGLDTN 171

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I N+L+++Y KCG L EA K+   M   RD+VSW+SM++ Y   G+  DA+ +  EM 
Sbjct: 172 LFIGNALVAMYGKCGCLREARKVLDQMP-YRDVVSWNSMVAGYAQSGQFDDALEICKEMD 230

Query: 173 ELGFCPNEYCFSAV--IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
            L    +    +++  +   ++ ENV   H                              
Sbjct: 231 SLNLNHDAGTMASLSPVVCYTSLENVQYIH------------------------------ 260

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                   +F++MT+KN + W +MI        P +A+ LFL M   G  PD  T++ ++
Sbjct: 261 -------NMFERMTKKNLISWNVMIAIYVNNSMPNEAVSLFLQMEECGMKPDAVTIASLL 313

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
            AC +L     G++LH +  +  L  ++ +  +L+DMYAKC   G ++++R VFD+M   
Sbjct: 314 PACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKC---GCLEEARDVFDKMRLR 370

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDS 404
           +V+SWT++++ Y +S G+  +AV LF+ M+     P+   F SVL AC +  LLD 
Sbjct: 371 DVVSWTSMMSAYGRS-GQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQ 425



 Score =  160 bits (404), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 227/479 (47%), Gaps = 50/479 (10%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF-KSMGNKRDIVSWSSMISS 154
           L KL   ++    L  +  +   L+  YS  G+ + A  IF +S+  ++++V ++ MI S
Sbjct: 54  LNKLHSKIVINEHLRIDPTLAIKLMRAYSAQGETSVARYIFDRSL--EKNVVFFNVMIRS 111

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           YVN    V+A+ +F  ML   F P+ Y F  V++ACS  +N+ +G  ++  ++K G  D+
Sbjct: 112 YVNNNLYVEALSIFQVMLSCAFNPDHYTFPCVLKACSGLDNLRVGLQVHDAIVKVG-LDT 170

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           ++ +G AL+ M+ K    L  A KV D+M  ++ V W  M+    Q G   DA+ +  +M
Sbjct: 171 NLFIGNALVAMYGKCGC-LREARKVLDQMPYRDVVSWNSMVAGYAQSGQFDDALEICKEM 229

Query: 275 ILSGFLPDRFTL---SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
                  D   L   +G +++ S +  +TS +                            
Sbjct: 230 -------DSLNLNHDAGTMASLSPVVCYTSLE---------------------------- 254

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
               +V     +F+RM   N++SW  +I  YV +     EAV LF  M +  + P+  T 
Sbjct: 255 ----NVQYIHNMFERMTKKNLISWNVMIAIYVNN-SMPNEAVSLFLQMEECGMKPDAVTI 309

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           AS+L ACG+L    +  +++ +  K     +  + N+L+ MYA+ G +E+AR  F+ +  
Sbjct: 310 ASLLPACGDLSALFLGRRLHKYIEKGNLRPNLLLENALLDMYAKCGCLEEARDVFDKMRL 369

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +++VS+ +M+ AY ++     A  L  ++ D+G    +  F S+LS  S  G + +G   
Sbjct: 370 RDVVSWTSMMSAYGRSGQGYDAVALFAKMLDSGQNPDSIAFVSVLSACSHTGLLDQGRHY 429

Query: 512 HARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
              + +  G       +  ++ ++ R   VE A+   K+M  + N   W ++++    H
Sbjct: 430 FRMMTEQYGIVPRIEHFACMVDLFGRAGEVEEAYSFIKQMPMEPNERVWGALLSACRVH 488



 Score =  102 bits (253), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/214 (30%), Positives = 111/214 (51%), Gaps = 17/214 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++N+    +A+     M + G  PD  T + LL +C       LG+ +H  + +  L PN
Sbjct: 281 YVNNSMPNEAVSLFLQMEECGMKPDAVTIASLLPACGDLSALFLGRRLHKYIEKGNLRPN 340

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
            ++ N+L+ +Y+KCG L EA  +F  M   RD+VSW+SM+S+Y   G+  DA+ +F +ML
Sbjct: 341 LLLENALLDMYAKCGCLEEARDVFDKM-RLRDVVSWTSMMSAYGRSGQGYDAVALFAKML 399

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG-HII------YGFLLKCGYFDSDVCVGCALIDM 225
           + G  P+   F +V+ ACS+T  +  G H        YG + +  +F         ++D+
Sbjct: 400 DSGQNPDSIAFVSVLSACSHTGLLDQGRHYFRMMTEQYGIVPRIEHF-------ACMVDL 452

Query: 226 FVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRC 258
           F +   ++E AY    +M  E N   W  +++ C
Sbjct: 453 FGRAG-EVEEAYSFIKQMPMEPNERVWGALLSAC 485


>gi|115451769|ref|NP_001049485.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|108707037|gb|ABF94832.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113547956|dbj|BAF11399.1| Os03g0235200 [Oryza sativa Japonica Group]
 gi|125585525|gb|EAZ26189.1| hypothetical protein OsJ_10058 [Oryza sativa Japonica Group]
 gi|215706461|dbj|BAG93317.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 641

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/554 (38%), Positives = 343/554 (61%), Gaps = 10/554 (1%)

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
           A D+C   +L+   ++      +  +R++FDRM   +  +W+A+++GY + G + + A+ 
Sbjct: 91  APDICSHNTLISALSRSPR--HLPSARELFDRMPQRDHFAWSALVSGYTRHG-QPEAALA 147

Query: 375 LFSDMIQ---GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRG---RALDDCVGNS 428
           L+  M +      A N FT +S L A           +++ H V+RG      D  + ++
Sbjct: 148 LYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSA 207

Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL-LHEIEDTGVGT 487
           L  MYA+ GR++DAR+ F+ +  ++ VS+  MV+ Y       + F L LH +   GV  
Sbjct: 208 LADMYAKCGRVDDARRVFDRMPVRDAVSWTAMVERYFDGGRGGEGFRLFLHMLRTRGVRP 267

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
           + +T+A +L   +       G Q+H R+ KSG   +    +AL+ MYS+C ++ +A +VF
Sbjct: 268 NEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSKCGDMGSAVRVF 327

Query: 548 KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
           + M   +++SWT++I+G+A++G    AL  F   L  GIKP+ +T++ VLSAC+HAGL+ 
Sbjct: 328 EAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVD 387

Query: 608 EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
           +G + F S+ +++ I    +HYAC++DLL RSG    A + I +M +  +  +W + LG 
Sbjct: 388 KGLEIFHSIKEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWASLLGG 447

Query: 668 CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
           CR+H +  L + AAE + E +P++PA ++ L+N+YAS G ++ V ++R+ M+ + + K  
Sbjct: 448 CRIHKNVGLARRAAEALFEIEPENPATYVTLANIYASVGLFDEVEDVRRIMESKGITKMP 507

Query: 728 GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
             SWIE   +VH F VG+ SHPK  EIYA L +L +K+ E GY+ D  FVLH++E+EQK 
Sbjct: 508 ASSWIEVGRRVHVFLVGDKSHPKADEIYALLKKLYVKMVEEGYVADIEFVLHDVEDEQKE 567

Query: 788 QYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRF 847
           Q +  HSE++AVAFG+I+T +  PI+VFKNLR+CGDCH AIK IS +  R+I++RDSNRF
Sbjct: 568 QDIGYHSERLAVAFGIIATPEGSPIKVFKNLRICGDCHAAIKLISQIVQRDIIVRDSNRF 627

Query: 848 HHIKDGKCSCNDYW 861
           HH KDG CSC DYW
Sbjct: 628 HHFKDGICSCRDYW 641



 Score =  176 bits (445), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 209/429 (48%), Gaps = 35/429 (8%)

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D+C    LI    +    L SA ++FD+M +++   W+ +++  T+ G P  A+ L+  M
Sbjct: 93  DICSHNTLISALSRSPRHLPSARELFDRMPQRDHFAWSALVSGYTRHGQPEAALALYRRM 152

Query: 275 IL---SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL---ALDVCVGCSLVDMY 328
                +    + FT S  ++A +      +G++LH   +R G+     D  +  +L DMY
Sbjct: 153 QEEPGNDGADNEFTASSALAAAAAARCGRAGRELHCHVVRRGIDAAGGDAVLWSALADMY 212

Query: 329 AKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPN 387
           AKC   G VDD+R+VFDRM   + +SWTA++  Y   GGR  E  +LF  M++ + V PN
Sbjct: 213 AKC---GRVDDARRVFDRMPVRDAVSWTAMVERYFD-GGRGGEGFRLFLHMLRTRGVRPN 268

Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMYARSGRMEDARKAF 446
            FT+A VL+AC      +   QV+    K G   D C   S L+ MY++ G M  A + F
Sbjct: 269 EFTYAGVLRACAQFAVESFGRQVHGRMAKSGTG-DSCFAESALLRMYSKCGDMGSAVRVF 327

Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
           E++ + +LVS+  ++  YA+N   E+A         +G+     TF  +LS  +  G + 
Sbjct: 328 EAMAKPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVGVLSACAHAGLVD 387

Query: 507 KGEQIHARIIKSGFESNHCI------YNALISMYSRCANVEAAFQVFKEMEDR-NVISWT 559
           KG +I   I     +  +CI      Y  +I + SR    E A ++   M  + N   W 
Sbjct: 388 KGLEIFHSI-----KEQYCIEHTADHYACVIDLLSRSGQFERAEKMIGNMAVKPNKFLWA 442

Query: 560 SMITGFAKH---GFAARALEIFYKMLADGIKP-NGITYIAVLSACSHAGLISEGWKHFRS 615
           S++ G   H   G A RA E  ++     I+P N  TY+ + +  +  GL  E  +  R 
Sbjct: 443 SLLGGCRIHKNVGLARRAAEALFE-----IEPENPATYVTLANIYASVGLFDE-VEDVRR 496

Query: 616 MYDEHGIVQ 624
           + +  GI +
Sbjct: 497 IMESKGITK 505



 Score =  145 bits (367), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 229/449 (51%), Gaps = 43/449 (9%)

Query: 98  KLVHSLLTRSKLEPNSVIL------------NSLISLYSKCG-DLNEANKIFKSMGNKRD 144
           +L+H L +     P+++ L            N+LIS  S+    L  A ++F  M  +RD
Sbjct: 67  RLLHLLSSHPATLPDALALFSSIAAPDICSHNTLISALSRSPRHLPSARELFDRM-PQRD 125

Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLEL---GFCPNEYCFSAVIRACSNTENVAIGHI 201
             +WS+++S Y   G+   A+ ++  M E        NE+  S+ + A +       G  
Sbjct: 126 HFAWSALVSGYTRHGQPEAALALYRRMQEEPGNDGADNEFTASSALAAAAAARCGRAGRE 185

Query: 202 IYGFLLKCGY--FDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRC 258
           ++  +++ G      D  +  AL DM+ K G VD   A +VFD+M  ++ V WT M+ R 
Sbjct: 186 LHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVD--DARRVFDRMPVRDAVSWTAMVERY 243

Query: 259 TQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
              G   +  RLFL M+ + G  P+ FT +GV+ AC++  + + G+Q+H    ++G    
Sbjct: 244 FDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDS 303

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
                +L+ MY+KC   G +  + +VF+ M   +++SWTA+I+GY Q+ G+ +EA++ F 
Sbjct: 304 CFAESALLRMYSKC---GDMGSAVRVFEAMAKPDLVSWTAVISGYAQN-GQPEEALRYFD 359

Query: 378 DMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMY 433
             ++  + P+H TF  VL AC +  L+D  +  +++ H++K    ++    +   +I + 
Sbjct: 360 MFLRSGIKPDHVTFVGVLSACAHAGLVDKGL--EIF-HSIKEQYCIEHTADHYACVIDLL 416

Query: 434 ARSGRMEDARKAFESLFEK-NLVSYNTMVDA--YAKNLN-SEKAFELLHEIEDTGVGTSA 489
           +RSG+ E A K   ++  K N   + +++      KN+  + +A E L EIE      + 
Sbjct: 417 SRSGQFERAEKMIGNMAVKPNKFLWASLLGGCRIHKNVGLARRAAEALFEIEP----ENP 472

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKS 518
            T+ +L +  +S+G   + E +  RI++S
Sbjct: 473 ATYVTLANIYASVGLFDEVEDVR-RIMES 500



 Score =  127 bits (318), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 178/396 (44%), Gaps = 93/396 (23%)

Query: 97  GKLVHSLLTRSKLEP---NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
           G+ +H  + R  ++    ++V+ ++L  +Y+KCG +++A ++F  M   RD VSW++M+ 
Sbjct: 183 GRELHCHVVRRGIDAAGGDAVLWSALADMYAKCGRVDDARRVFDRM-PVRDAVSWTAMVE 241

Query: 154 SYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
            Y + G+  +   +F+ ML   G  PNE+ ++ V+RAC+     + G  ++G + K G  
Sbjct: 242 RYFDGGRGGEGFRLFLHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTG 301

Query: 213 DSDVCVG-CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           DS  C    AL+ M+ K   D+ SA +VF+ M + + V WT +I+   Q G P +A+R F
Sbjct: 302 DS--CFAESALLRMYSKCG-DMGSAVRVFEAMAKPDLVSWTAVISGYAQNGQPEEALRYF 358

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAK 330
              + SG  PD  T  GV+SAC+   L   G ++ HS      +    C+  +  D YA 
Sbjct: 359 DMFLRSGIKPDHVTFVGVLSACAHAGLVDKGLEIFHS------IKEQYCIEHT-ADHYA- 410

Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           C +D                            +   G+ + A K+  +M    V PN F 
Sbjct: 411 CVID---------------------------LLSRSGQFERAEKMIGNM---AVKPNKFL 440

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
           +AS+L  C   +  NV                                   AR+A E+LF
Sbjct: 441 WASLLGGC--RIHKNVGL---------------------------------ARRAAEALF 465

Query: 451 E---KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
           E   +N  +Y T+ + YA       +  L  E+ED 
Sbjct: 466 EIEPENPATYVTLANIYA-------SVGLFDEVEDV 494



 Score = 82.8 bits (203), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 53/194 (27%), Positives = 96/194 (49%), Gaps = 3/194 (1%)

Query: 66  LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
           L ++  +G  P+  TY+ +L++C +      G+ VH  + +S    +    ++L+ +YSK
Sbjct: 257 LHMLRTRGVRPNEFTYAGVLRACAQFAVESFGRQVHGRMAKSGTGDSCFAESALLRMYSK 316

Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
           CGD+  A ++F++M  K D+VSW+++IS Y   G+  +A+  F   L  G  P+   F  
Sbjct: 317 CGDMGSAVRVFEAMA-KPDLVSWTAVISGYAQNGQPEEALRYFDMFLRSGIKPDHVTFVG 375

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           V+ AC++   V  G  I+  + +    +        +ID+  + S   E A K+   M  
Sbjct: 376 VLSACAHAGLVDKGLEIFHSIKEQYCIEHTADHYACVIDLLSR-SGQFERAEKMIGNMAV 434

Query: 246 K-NTVGWTLMITRC 258
           K N   W  ++  C
Sbjct: 435 KPNKFLWASLLGGC 448


>gi|356525712|ref|XP_003531467.1| PREDICTED: pentatricopeptide repeat-containing protein At5g50390,
           chloroplastic-like [Glycine max]
          Length = 691

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 226/599 (37%), Positives = 358/599 (59%), Gaps = 7/599 (1%)

Query: 265 RDAIRLF--LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGC 322
           R+A+ LF  L++   G+     T   +VSAC  L      K++ ++ I +G   D+ V  
Sbjct: 98  REAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLYVMN 157

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
            ++ M+ KC   G + D+RK+FD M + +V SW  ++ G V +G    EA +LF  M + 
Sbjct: 158 RVLFMHVKC---GLMLDARKLFDEMPEKDVASWMTMVGGLVDTGNFS-EAFRLFLCMWKE 213

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
                  TFA++++A   L    V +Q+++ A+KRG   D  V  +LI MY++ G +EDA
Sbjct: 214 FNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDHFVSCALIDMYSKCGSIEDA 273

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
              F+ + EK  V +N+++ +YA +  SE+A  L  E+ D+G     +T + ++   + +
Sbjct: 274 HCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRICARL 333

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMI 562
            ++   +Q HA +++ GF ++     AL+  YS+   +E A  VF  M  +NVISW ++I
Sbjct: 334 ASLEHAKQAHAALVRHGFATDIVANTALVDFYSKWGRMEDARHVFNRMRHKNVISWNALI 393

Query: 563 TGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
            G+  HG    A+E+F +ML +G+ P  +T++AVLSACS++GL   GW+ F SM  +H +
Sbjct: 394 AGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSACSYSGLSQRGWEIFYSMKRDHKV 453

Query: 623 VQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAE 682
             R  HYACM++LLGR   L EA   IR+ P      +W   L ACR+H + ELGK AAE
Sbjct: 454 KPRAMHYACMIELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAE 513

Query: 683 MILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFH 742
            +   +P+    +I+L NLY S+G  +  A I + +K++ L     CSW+E   + + F 
Sbjct: 514 KLYGMEPEKLCNYIVLLNLYNSSGKLKEAAGILQTLKKKGLRMLPACSWVEVKKQPYAFL 573

Query: 743 VGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFG 802
            G+ SH +T EIY ++D L ++I + GY  +   +L +++EE++ + L  HSEK+A+AFG
Sbjct: 574 CGDKSHSQTKEIYQKVDNLMVEICKHGYAEENETLLPDVDEEEQ-RILKYHSEKLAIAFG 632

Query: 803 LISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           LI+T    P+++ +  RVCGDCH+AIK I+MVTGREIV+RD++RFHH ++G CSC DYW
Sbjct: 633 LINTPHWTPLQITQGHRVCGDCHSAIKLIAMVTGREIVVRDASRFHHFRNGSCSCGDYW 691



 Score =  197 bits (502), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 185/345 (53%), Gaps = 9/345 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N  R    +F +  +   G      TY  L+ +C+  R+    K V + +  S  EP+  
Sbjct: 95  NRHREAMELFEILELEHDGYGVGASTYDALVSACVGLRSIRGVKRVFNYMINSGFEPDLY 154

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           ++N ++ ++ KCG + +A K+F  M  K D+ SW +M+   V+ G   +A  +F+ M + 
Sbjct: 155 VMNRVLFMHVKCGLMLDARKLFDEMPEK-DVASWMTMVGGLVDTGNFSEAFRLFLCMWKE 213

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
                   F+ +IRA +    V +G  I+   LK G  D D  V CALIDM+ K GS+  
Sbjct: 214 FNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGD-DHFVSCALIDMYSKCGSI-- 270

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+ VFD+M EK TVGW  +I      G   +A+ L+ +M  SG   D FT+S V+  C
Sbjct: 271 EDAHCVFDQMPEKTTVGWNSIIASYALHGYSEEALSLYFEMRDSGTTVDHFTISIVIRIC 330

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           + L      KQ H+  +R G A D+    +LVD Y+K    G ++D+R VF+RM   NV+
Sbjct: 331 ARLASLEHAKQAHAALVRHGFATDIVANTALVDFYSKW---GRMEDARHVFNRMRHKNVI 387

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
           SW A+I GY  + G+ +EAV++F  M+Q  V P H TF +VL AC
Sbjct: 388 SWNALIAGY-GNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSAC 431



 Score =  108 bits (270), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 96/405 (23%), Positives = 177/405 (43%), Gaps = 49/405 (12%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           ++ G   +A      M ++ N     T++ ++++        +GK +HS   +  +  + 
Sbjct: 195 VDTGNFSEAFRLFLCMWKEFNDGRSRTFATMIRASAGLGLVQVGKQIHSCALKRGVGDDH 254

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
            +  +LI +YSKCG + +A+ +F  M  K   V W+S+I+SY   G   +A+ ++ EM +
Sbjct: 255 FVSCALIDMYSKCGSIEDAHCVFDQMPEK-TTVGWNSIIASYALHGYSEEALSLYFEMRD 313

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G   + +  S VIR C+   ++      +  L++ G F +D+    AL+D + K    +
Sbjct: 314 SGTTVDHFTISIVIRICARLASLEHAKQAHAALVRHG-FATDIVANTALVDFYSKWG-RM 371

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A  VF++M  KN + W  +I      G  ++A+ +F  M+  G  P   T   V+SAC
Sbjct: 372 EDARHVFNRMRHKNVISWNALIAGYGNHGQGQEAVEMFEQMLQEGVTPTHVTFLAVLSAC 431

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S      SG     W I   +  D                        KV  R + +  M
Sbjct: 432 S-----YSGLSQRGWEIFYSMKRD-----------------------HKVKPRAMHYACM 463

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL-LDSNVAEQ 409
                    ++  GR+    + ++ +      P    +A++L AC    NL L    AE+
Sbjct: 464 ---------IELLGRESLLDEAYALIRTAPFKPTANMWAALLTACRMHKNLELGKLAAEK 514

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           +Y    ++      C    L+++Y  SG++++A    ++L +K L
Sbjct: 515 LYGMEPEK-----LCNYIVLLNLYNSSGKLKEAAGILQTLKKKGL 554


>gi|359477907|ref|XP_002270439.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g04840-like [Vitis vinifera]
          Length = 677

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 230/633 (36%), Positives = 355/633 (56%), Gaps = 47/633 (7%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           L+ A  +F      N   +  +I    +      ++  F+ M+     PDR TL  V+ +
Sbjct: 88  LDYALSIFRCFDHPNLFVFNALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKS 147

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN- 351
            + L     G+ LH   ++ GL  D  V  SLVDMY K    G +    ++FD     N 
Sbjct: 148 VAALVDVGLGRCLHGGVMKLGLEFDSFVRVSLVDMYVKI---GELGFGLQLFDESPQRNK 204

Query: 352 ---VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
              ++ W  +I G  + G   K A  LF  M +                           
Sbjct: 205 AESILLWNVLINGCCKVGDLSK-AASLFEAMPERNAGS---------------------- 241

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
                             NSLI+ + R+G ++ AR+ F  + EKN+VS+ TM++ +++N 
Sbjct: 242 -----------------WNSLINGFVRNGDLDRARELFVQMPEKNVVSWTTMINGFSQNG 284

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           + EKA  +   + + GV  +  T  S L   + IGA+  GE+IH  +  +GF+ N  I  
Sbjct: 285 DHEKALSMFWRMLEEGVRPNDLTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGT 344

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           AL+ MY++C N+++A +VF E + +++++W+ MI G+A HG   +AL+ F KM + GI P
Sbjct: 345 ALVDMYAKCGNIKSASRVFVETKGKDLLTWSVMIWGWAIHGCFDQALQCFVKMKSAGINP 404

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           + + ++A+L+ACSH+G + +G   F SM  ++ I   M+HY  +VDLLGR+G L EAL F
Sbjct: 405 DEVIFLAILTACSHSGNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSF 464

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I+SMP++ D ++W     ACR H + E+ +  AE +L+ +P+ P +++ LSN+YA+ G W
Sbjct: 465 IQSMPINPDFVIWGALFCACRAHKNIEMAELTAEKLLQLEPKHPGSYVFLSNVYAAVGRW 524

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           E V  +R  MK R + K+ G S+IE + +VH F  G+ +H +  EI  +L+++    K+ 
Sbjct: 525 EDVERVRTLMKNRGVEKDPGWSYIEVEGQVHSFVAGDHAHVRAEEISLKLEEITASAKQE 584

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY+P+T +VLH +EEE+K   L  HSEK+A+AFGLIST+    IR+ KNLRVCGDCH+ +
Sbjct: 585 GYMPETAWVLHNIEEEEKEDALGSHSEKLALAFGLISTAPGSTIRIVKNLRVCGDCHSMM 644

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           KY S ++ REI+LRD  RFHH KDG CSC DYW
Sbjct: 645 KYASKLSRREIILRDIKRFHHFKDGTCSCGDYW 677



 Score =  122 bits (307), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 214/475 (45%), Gaps = 65/475 (13%)

Query: 48  NRLIYHL-NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
           N LI  L  + R + ++    LM +    PD  T   +LKS     +  LG+ +H  + +
Sbjct: 107 NALIRGLAENSRFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMK 166

Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK---RDIVSWSSMISSYVNRGKQVD 163
             LE +S +  SL+ +Y K G+L    ++F     +     I+ W+ +I+     G    
Sbjct: 167 LGLEFDSFVRVSLVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGDLSK 226

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A  +F  M E                                    G ++S       LI
Sbjct: 227 AASLFEAMPER---------------------------------NAGSWNS-------LI 246

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           + FV+   DL+ A ++F +M EKN V WT MI   +Q G    A+ +F  M+  G  P+ 
Sbjct: 247 NGFVRNG-DLDRARELFVQMPEKNVVSWTTMINGFSQNGDHEKALSMFWRMLEEGVRPND 305

Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
            T+   + AC+++     G+++H++    G  L+  +G +LVDMYAKC   G++  + +V
Sbjct: 306 LTVVSALLACTKIGALQVGERIHNYLSSNGFQLNRGIGTALVDMYAKC---GNIKSASRV 362

Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLD 403
           F      ++++W+ +I G+   G  D +A++ F  M    + P+   F ++L AC +   
Sbjct: 363 FVETKGKDLLTWSVMIWGWAIHGCFD-QALQCFVKMKSAGINPDEVIFLAILTACSH--S 419

Query: 404 SNVAEQV-YTHAVKRGRALDDCVGNS--LISMYARSGRMEDARKAFESL-FEKNLVSYNT 459
            NV + + +  +++   +++  + +   ++ +  R+GR+++A    +S+    + V +  
Sbjct: 420 GNVDQGLNFFESMRLDYSIEPTMKHYTLIVDLLGRAGRLDEALSFIQSMPINPDFVIWGA 479

Query: 460 MVDAYAKNLNSEKA---FELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +  A   + N E A    E L ++E    G+  Y F S     +   A+G+ E +
Sbjct: 480 LFCACRAHKNIEMAELTAEKLLQLEPKHPGS--YVFLS-----NVYAAVGRWEDV 527



 Score = 46.6 bits (109), Expect = 0.057,   Method: Compositional matrix adjust.
 Identities = 53/230 (23%), Positives = 95/230 (41%), Gaps = 31/230 (13%)

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           QIHA+I      SN  +   LIS      +++ A  +F+  +  N+  + ++I G A++ 
Sbjct: 58  QIHAQIFLHNLFSNSRVVTQLISSSCSLKSLDYALSIFRCFDHPNLFVFNALIRGLAENS 117

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSA-----------CSHAGLISEGWKHFRSMYD 618
               ++  F  ML   I+P+ +T   VL +           C H G++  G +     +D
Sbjct: 118 RFEGSVSHFVLMLRLSIRPDRLTLPFVLKSVAALVDVGLGRCLHGGVMKLGLE-----FD 172

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL---SADVLVWRTFLGACRVHGDTE 675
               V        +VD+  + G L   L+     P    +  +L+W   +  C   GD  
Sbjct: 173 SFVRVS-------LVDMYVKIGELGFGLQLFDESPQRNKAESILLWNVLINGCCKVGD-- 223

Query: 676 LGKHAAEMILEQDPQDPAAHI-LLSNLYASAGHWEYVANIRKRMKERNLI 724
           L K A+  + E  P+  A     L N +   G  +    +  +M E+N++
Sbjct: 224 LSKAAS--LFEAMPERNAGSWNSLINGFVRNGDLDRARELFVQMPEKNVV 271


>gi|302788574|ref|XP_002976056.1| hypothetical protein SELMODRAFT_104474 [Selaginella moellendorffii]
 gi|300156332|gb|EFJ22961.1| hypothetical protein SELMODRAFT_104474 [Selaginella moellendorffii]
          Length = 665

 Score =  430 bits (1105), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 247/670 (36%), Positives = 360/670 (53%), Gaps = 46/670 (6%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +E A  VF+K+   N   W+++I  C   G  R A+ L+  M   G   D   L  +VSA
Sbjct: 1   MEEARAVFEKIEFPNIFSWSIIIGACVDNGLARRALELYHWMDHQGVRLDMVVLINLVSA 60

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHN 351
           CS L     G+ L +     G  L   V  SL++MY K    GSV D+RK F  M  D +
Sbjct: 61  CSSLGSLDHGRALEARITSMGFHLHPVVRNSLLNMYCKA---GSVGDARKFFQDMAGDQS 117

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           V+SWTA+I+G+   G R+  A+  F  M+   V PN  TF S+L AC    D  + EQ  
Sbjct: 118 VVSWTAMISGFALHG-REDLALDFFRKMVAEGVRPNEVTFVSILGACAAARDQGLDEQAL 176

Query: 412 T------------HAVKRGRALDDC-------------------------VGNSLISMYA 434
                          V    AL+ C                         V NSL++MY 
Sbjct: 177 RLFRVMDLEGHTPDEVTLVAALEACSNLNLLAAGKKLHELILDAGLDSSIVRNSLLNMYG 236

Query: 435 RSGRMEDARKAFESLFE-KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           + G +++AR+ FE   + +NL++++TM+ AY+ N +  +A  L  +++  G+    YTF 
Sbjct: 237 KCGGLDEARRVFERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLEGLKPDEYTFT 296

Query: 494 SLLSGASSIG-AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           SLL   S  G A+ +G  +H R+   G E    +  AL++MY R   +E A +VF++M  
Sbjct: 297 SLLDVCSIAGDALAEGRALHRRLEAKGLEKKMVLATALVNMYGRYGQLEDALRVFEKMNH 356

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
            N+++WT++I  FA+HG    A+++ ++M  +G++ + I +++VL ACSHAG++  G   
Sbjct: 357 WNLVAWTALIAAFAQHG-DVHAIDLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGLSC 415

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
           F+ M  + G+     HY+CMVDLL R G + EA E + SMP     +  +T L ACRV G
Sbjct: 416 FQEMVADFGVRGGAAHYSCMVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAACRVSG 475

Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
           DT  G   A +     P D A ++L+S+ YA+   W+ VA +R+RM +  + K  G S +
Sbjct: 476 DTPRGARVARLASGLIPHDAAPYVLMSHAYAAVEKWDEVAEVRERMAKLGVKKPRGWSCV 535

Query: 733 EADNKVHKFHVGETS-HPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           E  N+VH+F  G  S H +  EI  EL +L   +KE GY+PDT  + H LEE+ K   L 
Sbjct: 536 EVKNRVHQFFAGNFSWHSEAAEIEVELRRLQAVVKEGGYVPDTGQIGHRLEEDDKEDLLA 595

Query: 792 QHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIK 851
            HSE++A+AFGL+      PI V KNLRVC DCH   K IS   GR IV+RD+ RFH  +
Sbjct: 596 LHSERVAIAFGLLRVPAGLPIHVVKNLRVCSDCHAVAKIISRSVGRRIVVRDAYRFHRFE 655

Query: 852 DGKCSCNDYW 861
           +G CSC DYW
Sbjct: 656 NGTCSCGDYW 665



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 119/456 (26%), Positives = 214/456 (46%), Gaps = 58/456 (12%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           +++G  ++A+     M  +G   D+     L+ +C    +   G+ + + +T      + 
Sbjct: 27  VDNGLARRALELYHWMDHQGVRLDMVVLINLVSACSSLGSLDHGRALEARITSMGFHLHP 86

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
           V+ NSL+++Y K G + +A K F+ M   + +VSW++MIS +   G++  A+  F +M+ 
Sbjct: 87  VVRNSLLNMYCKAGSVGDARKFFQDMAGDQSVVSWTAMISGFALHGREDLALDFFRKMVA 146

Query: 174 LGFCPNEYCFS--------------------------------------AVIRACSNTEN 195
            G  PNE  F                                       A + ACSN   
Sbjct: 147 EGVRPNEVTFVSILGACAAARDQGLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNL 206

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE-KNTVGWTLM 254
           +A G  ++  +L  G  DS + V  +L++M+ K    L+ A +VF++ ++ +N + W+ M
Sbjct: 207 LAAGKKLHELILDAG-LDSSI-VRNSLLNMYGKCG-GLDEARRVFERCSDCRNLITWSTM 263

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS-ELELFTSGKQLHSWAIRTG 313
           I   +  G  R A+ L+  M L G  PD +T + ++  CS   +    G+ LH      G
Sbjct: 264 IAAYSLNGDGRQALSLYKKMDLEGLKPDEYTFTSLLDVCSIAGDALAEGRALHRRLEAKG 323

Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
           L   + +  +LV+MY +    G ++D+ +VF++M   N+++WTA+I  + Q G  D  A+
Sbjct: 324 LEKKMVLATALVNMYGRY---GQLEDALRVFEKMNHWNLVAWTALIAAFAQHG--DVHAI 378

Query: 374 KLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVA---EQVYTHAVKRGRALDDCVGNS 428
            L   M    V  +   F SVL AC    +L++ ++   E V    V+ G A   C    
Sbjct: 379 DLSWRMHLEGVQADDIVFLSVLHACSHAGVLEAGLSCFQEMVADFGVRGGAAHYSC---- 434

Query: 429 LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
           ++ + AR GR+ +A +   S+ FE   +   T++ A
Sbjct: 435 MVDLLARCGRVAEAEELLHSMPFEPAHMEMKTLLAA 470



 Score =  123 bits (308), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 168/341 (49%), Gaps = 20/341 (5%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           + G  ++A+    +M  +G+ PD  T    L++C        GK +H L+  + L+ +S+
Sbjct: 168 DQGLDEQALRLFRVMDLEGHTPDEVTLVAALEACSNLNLLAAGKKLHELILDAGLD-SSI 226

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + NSL+++Y KCG L+EA ++F+   + R++++WS+MI++Y   G    A+ ++ +M   
Sbjct: 227 VRNSLLNMYGKCGGLDEARRVFERCSDCRNLITWSTMIAAYSLNGDGRQALSLYKKMDLE 286

Query: 175 GFCPNEYCFSAVIRACS-NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
           G  P+EY F++++  CS   + +A G  ++  L   G  +  + +  AL++M+ +    L
Sbjct: 287 GLKPDEYTFTSLLDVCSIAGDALAEGRALHRRLEAKG-LEKKMVLATALVNMYGRYG-QL 344

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A +VF+KM   N V WT +I    Q G    AI L   M L G   D      V+ AC
Sbjct: 345 EDALRVFEKMNHWNLVAWTALIAAFAQHG-DVHAIDLSWRMHLEGVQADDIVFLSVLHAC 403

Query: 294 SELELFTSG-----KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM- 347
           S   +  +G     + +  + +R G A   C    +VD+ A+C   G V ++ ++   M 
Sbjct: 404 SHAGVLEAGLSCFQEMVADFGVRGGAAHYSC----MVDLLARC---GRVAEAEELLHSMP 456

Query: 348 LDHNVMSWTAIITGYVQSGG--RDKEAVKLFSDMIQGQVAP 386
            +   M    ++     SG   R     +L S +I    AP
Sbjct: 457 FEPAHMEMKTLLAACRVSGDTPRGARVARLASGLIPHDAAP 497


>gi|115456537|ref|NP_001051869.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|41469627|gb|AAS07350.1| putative pentatricopeptide repeat domain contianing protein [Oryza
           sativa Japonica Group]
 gi|113550340|dbj|BAF13783.1| Os03g0844000 [Oryza sativa Japonica Group]
 gi|215686748|dbj|BAG89598.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 702

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/664 (34%), Positives = 386/664 (58%), Gaps = 18/664 (2%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P+ V+    ++   K G L +A  +F  M  ++++V+W+S++S Y   G+   A+ MF +
Sbjct: 46  PDVVLECKRLNRLVKSGRLADALDLFDRM-PRKNVVAWTSVMSGYTRNGRPEAALAMFAD 104

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M+E G  PN++  +A + AC++   +  G  ++   ++ G F  D  +G  LI+M+ + G
Sbjct: 105 MVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAG-FAGDAWIGSCLIEMYSRCG 163

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S  L +A +VFD+M   + VG+T +I+   + G    A    + M+  G  P+  T++ +
Sbjct: 164 S--LPAAKEVFDRMDSPDVVGYTSLISAFCRNGEFELAAEALIQMLKQGLKPNEHTMTTI 221

Query: 290 VSACSELELFTSGKQLHSWAIRT-GL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
           ++AC  +     G+Q+H + I+  GL +  V    +L+D Y++   +G    ++ VFD +
Sbjct: 222 LTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSR---NGEFKLAKAVFDSL 274

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
              NV+SW +++  Y++ G R +EA+++F DMI   V PN F  + VL ACG++    + 
Sbjct: 275 HCKNVVSWCSMMQLYIRDG-RLEEALQVFGDMISEGVDPNEFALSIVLGACGSI---GLG 330

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            Q++  A+K     D  V N+L+SMY R+G +E+       +   +LVS+ T + A  +N
Sbjct: 331 RQLHCSAIKHDLITDIRVSNALLSMYGRTGLVEELEAMLNKIENPDLVSWTTAISANFQN 390

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
              EKA  LL ++   G   + Y F+S+LS  + + ++ +G Q H   +K G +S  C  
Sbjct: 391 GFGEKAIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFHCLALKLGCDSEICTG 450

Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
           NALI+MYS+C  + +A   F  M   +V SW S+I G A+HG A +ALE+F KM ++GIK
Sbjct: 451 NALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDANKALEVFSKMRSNGIK 510

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
           P+  T++ VL  C+H+G++ EG   FR M D++       HYACM+D+LGR+G   EAL 
Sbjct: 511 PDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACMIDMLGRNGRFDEALR 570

Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGH 707
            I  MP   D L+W+T L +C++H + ++GK AA+ ++E   +D A+++L+SN+YA  G 
Sbjct: 571 MINDMPFEPDALIWKTLLASCKLHRNLDIGKLAADRLMELSDRDSASYVLMSNIYAMHGE 630

Query: 708 WEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
           WE    +R+RM E  + K+AGCSWIE +N+VH F   + SHP +  IY  L +L   +++
Sbjct: 631 WEDARKVRRRMDETGVKKDAGCSWIEINNEVHTFASRDMSHPNSDSIYQMLGELVAVMQD 690

Query: 768 FGYL 771
           F  L
Sbjct: 691 FDEL 694



 Score =  225 bits (574), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 153/535 (28%), Positives = 273/535 (51%), Gaps = 21/535 (3%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR + A+     M + G  P+    +  L +C        G+ VHSL  R+    +
Sbjct: 89  YTRNGRPEAALAMFADMVESGVAPNDFACNAALVACADLGALRAGEQVHSLAVRAGFAGD 148

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           + I + LI +YS+CG L  A ++F  M +  D+V ++S+IS++   G+   A    ++ML
Sbjct: 149 AWIGSCLIEMYSRCGSLPAAKEVFDRM-DSPDVVGYTSLISAFCRNGEFELAAEALIQML 207

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL-KCGYFDSDVCVGCALIDMFVKGSV 231
           + G  PNE+  + ++ AC       +G  I+G+L+ K G     V    ALID + +   
Sbjct: 208 KQGLKPNEHTMTTILTACPRV----LGQQIHGYLIKKIGLRSQSVYSSTALIDFYSRNG- 262

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           + + A  VFD +  KN V W  M+    + G   +A+++F DMI  G  P+ F LS V+ 
Sbjct: 263 EFKLAKAVFDSLHCKNVVSWCSMMQLYIRDGRLEEALQVFGDMISEGVDPNEFALSIVLG 322

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC  + L   G+QLH  AI+  L  D+ V  +L+ MY +    G V++   + +++ + +
Sbjct: 323 ACGSIGL---GRQLHCSAIKHDLITDIRVSNALLSMYGR---TGLVEELEAMLNKIENPD 376

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++SWT  I+   Q+G  +K A+ L   M      PN + F+SVL +C ++   +   Q +
Sbjct: 377 LVSWTTAISANFQNGFGEK-AIALLCQMHSEGFTPNGYAFSSVLSSCADVASLDQGMQFH 435

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             A+K G   + C GN+LI+MY++ G+M  AR AF+ +   ++ S+N+++  +A++ ++ 
Sbjct: 436 CLALKLGCDSEICTGNALINMYSKCGQMGSARLAFDVMHTHDVTSWNSLIHGHAQHGDAN 495

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNAL 530
           KA E+  ++   G+     TF  +L G +  G + +GE     +I +  F      Y  +
Sbjct: 496 KALEVFSKMRSNGIKPDDSTFLGVLMGCNHSGMVEEGELFFRLMIDQYSFTPAPSHYACM 555

Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLAD 584
           I M  R    + A ++  +M  + + + W +++     H    R L+I  K+ AD
Sbjct: 556 IDMLGRNGRFDEALRMINDMPFEPDALIWKTLLASCKLH----RNLDI-GKLAAD 605


>gi|225466163|ref|XP_002263755.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Vitis vinifera]
          Length = 624

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 232/619 (37%), Positives = 357/619 (57%), Gaps = 41/619 (6%)

Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDG 335
           LS     +  L G+ S  +  EL    KQ HS  IR GL+ D      ++  +   +  G
Sbjct: 14  LSSAKAHKLPLYGLDSCSTMAEL----KQYHSQIIRLGLSADNDAMGRVIK-FCAISKSG 68

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
            ++ + +VFD++   +   +  I  GY++     +  + ++S M+   V+PN FT+  ++
Sbjct: 69  DLNYALEVFDKIPHPDAYIYNTIFRGYLR-WQLARNCIFMYSRMLHKSVSPNKFTYPPLI 127

Query: 396 KACGNLLDSNVAE--QVYTHAVKRGRALDDCVGNSLISMY-------------------- 433
           +AC   +D  + E  Q++ H +K G   D    N+LI MY                    
Sbjct: 128 RAC--CIDYAIEEGKQIHAHVLKFGFGADGFSLNNLIHMYVNFQSLEQARRVFDNMPQRD 185

Query: 434 -----------ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
                      ++ G ++ AR+ FE + E+N VS+N M+ AY ++    +AF L   +  
Sbjct: 186 VVSWTSLITGYSQWGFVDKAREVFELMPERNSVSWNAMIAAYVQSNRLHEAFALFDRMRL 245

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             V    +  AS+LS  + +GA+ +G+ IH  I KSG E +  +   +I MY +C  +E 
Sbjct: 246 ENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELDSKLATTVIDMYCKCGCLEK 305

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A +VF E+  + + SW  MI G A HG    A+E+F +M  + + P+GIT++ VLSAC+H
Sbjct: 306 ASEVFNELPQKGISSWNCMIGGLAMHGKGEAAIELFKEMEREMVAPDGITFVNVLSACAH 365

Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
           +GL+ EG  +F+ M +  G+   MEH+ CMVDLLGR+G L EA + I  MP++ D  V  
Sbjct: 366 SGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINEMPVNPDAGVLG 425

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             +GACR+HG+TELG+   + ++E +P +   ++LL+NLYASAG WE VA +RK M +R 
Sbjct: 426 ALVGACRIHGNTELGEQIGKKVIELEPHNSGRYVLLANLYASAGRWEDVAKVRKLMNDRG 485

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           + K  G S IE+++ V +F  G  +HP+  EIYA+LD++   I+  GY+PDT+ VLH+++
Sbjct: 486 VKKAPGFSMIESESGVDEFIAGGRAHPQAKEIYAKLDEILETIRSIGYVPDTDGVLHDID 545

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE+K   L+ HSEK+A+AFGL+ T   + +R+ KNLR+C DCH A K IS V  REI++R
Sbjct: 546 EEEKENPLYYHSEKLAIAFGLLKTKPGETLRISKNLRICRDCHQASKLISKVYDREIIIR 605

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D NRFHH + G CSC DYW
Sbjct: 606 DRNRFHHFRMGGCSCKDYW 624



 Score =  140 bits (352), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 127/496 (25%), Positives = 213/496 (42%), Gaps = 84/496 (16%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISL--YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           K  HS + R  L  ++  +  +I     SK GDLN A ++F  + +  D   ++++   Y
Sbjct: 37  KQYHSQIIRLGLSADNDAMGRVIKFCAISKSGDLNYALEVFDKIPHP-DAYIYNTIFRGY 95

Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY---- 211
           +      + I M+  ML     PN++ +  +IRAC     +  G  I+  +LK G+    
Sbjct: 96  LRWQLARNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADG 155

Query: 212 ----------------------FDS----DVCVGCALIDMFVK-GSVDLESAYKVFDKMT 244
                                 FD+    DV    +LI  + + G VD   A +VF+ M 
Sbjct: 156 FSLNNLIHMYVNFQSLEQARRVFDNMPQRDVVSWTSLITGYSQWGFVD--KAREVFELMP 213

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
           E+N+V W  MI    Q     +A  LF  M L   + D+F  + ++SAC+ L     GK 
Sbjct: 214 ERNSVSWNAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKW 273

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H +  ++G+ LD  +  +++DMY KC   G ++ + +VF+ +    + SW  +I G   
Sbjct: 274 IHGYIEKSGIELDSKLATTVIDMYCKC---GCLEKASEVFNELPQKGISSWNCMIGGLAM 330

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
             G+ + A++LF +M +  VAP+  TF +VL AC                          
Sbjct: 331 H-GKGEAAIELFKEMEREMVAPDGITFVNVLSAC-------------------------- 363

Query: 425 VGNSLISMYARSGRMEDARKAFESLFE-----KNLVSYNTMVDAYAKNLNSEKAFELLHE 479
                    A SG +E+ +  F+ + E       +  +  MVD   +    E+A +L++E
Sbjct: 364 ---------AHSGLVEEGKHYFQYMTEVLGLKPGMEHFGCMVDLLGRAGLLEEARKLINE 414

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +    V   A    +L+      G    GEQI  ++I+     N   Y  L ++Y+    
Sbjct: 415 MP---VNPDAGVLGALVGACRIHGNTELGEQIGKKVIELE-PHNSGRYVLLANLYASAGR 470

Query: 540 VEAAFQVFKEMEDRNV 555
            E   +V K M DR V
Sbjct: 471 WEDVAKVRKLMNDRGV 486



 Score = 98.2 bits (243), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 80/324 (24%), Positives = 144/324 (44%), Gaps = 46/324 (14%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
           +  IF    M  K   P+  TY  L+++C        GK +H+ + +     +   LN+L
Sbjct: 102 RNCIFMYSRMLHKSVSPNKFTYPPLIRACCIDYAIEEGKQIHAHVLKFGFGADGFSLNNL 161

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY-----VNRGKQV------------ 162
           I +Y     L +A ++F +M  +RD+VSW+S+I+ Y     V++ ++V            
Sbjct: 162 IHMYVNFQSLEQARRVFDNM-PQRDVVSWTSLITGYSQWGFVDKAREVFELMPERNSVSW 220

Query: 163 --------------DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK 208
                         +A  +F  M       +++  ++++ AC+    +  G  I+G++ K
Sbjct: 221 NAMIAAYVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEK 280

Query: 209 CGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
            G  + D  +   +IDM+ K    LE A +VF+++ +K    W  MI      G    AI
Sbjct: 281 SG-IELDSKLATTVIDMYCKCGC-LEKASEVFNELPQKGISSWNCMIGGLAMHGKGEAAI 338

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW-----AIRTGLALDVCVGCS 323
            LF +M      PD  T   V+SAC+   L   GK    +      ++ G+      GC 
Sbjct: 339 ELFKEMEREMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEH---FGC- 394

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRM 347
           +VD+  +    G ++++RK+ + M
Sbjct: 395 MVDLLGRA---GLLEEARKLINEM 415



 Score = 68.2 bits (165), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/199 (25%), Positives = 92/199 (46%), Gaps = 4/199 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++   R+ +A    D M  +    D    + +L +C        GK +H  + +S +E +
Sbjct: 227 YVQSNRLHEAFALFDRMRLENVVLDKFVAASMLSACTGLGALEQGKWIHGYIEKSGIELD 286

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S +  ++I +Y KCG L +A+++F  +  K  I SW+ MI      GK   AI +F EM 
Sbjct: 287 SKLATTVIDMYCKCGCLEKASEVFNELPQK-GISSWNCMIGGLAMHGKGEAAIELFKEME 345

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVKGSV 231
                P+   F  V+ AC+++  V  G   + ++ +  G        GC ++D+  +  +
Sbjct: 346 REMVAPDGITFVNVLSACAHSGLVEEGKHYFQYMTEVLGLKPGMEHFGC-MVDLLGRAGL 404

Query: 232 DLESAYKVFDKMTEKNTVG 250
            LE A K+ ++M      G
Sbjct: 405 -LEEARKLINEMPVNPDAG 422


>gi|297722071|ref|NP_001173399.1| Os03g0317100 [Oryza sativa Japonica Group]
 gi|255674461|dbj|BAH92127.1| Os03g0317100 [Oryza sativa Japonica Group]
          Length = 706

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 249/748 (33%), Positives = 406/748 (54%), Gaps = 65/748 (8%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+ I+  ++ G++  A   F++M   R   S++++++ Y        A+ +F  M     
Sbjct: 21  NARIAHLARAGNIEGARAAFEAM-PLRTTASYNALLAGYFRNRLPDAALGLFRRMPSRDL 79

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
                  S +        + A         L    F   V    +L+  +V+  + L  A
Sbjct: 80  ASYNALISGLSLRRQTLPDAAAA-------LASIPFPPSVVSFTSLLRGYVRHGL-LADA 131

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR--FTLSGVVSACS 294
            ++F +M E+N V +T+++      G   +A RLF +M      PDR     + ++S   
Sbjct: 132 IRLFQQMPERNHVSYTVLLGGLLDAGRVNEARRLFDEM------PDRDVVAWTAMLSGYC 185

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
           +    T  + L     +     +V    +++  YA+   +G V+ +RK+F+ M + N +S
Sbjct: 186 QAGRITEARALFDEMPKR----NVVSWTAMISGYAQ---NGEVNLARKLFEVMPERNEVS 238

Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           WTA++ GY+Q+G   ++A +LF+ M +  VA           AC                
Sbjct: 239 WTAMLVGYIQAG-HVEDAAELFNAMPEHPVA-----------AC---------------- 270

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
                       N+++  + + G ++ A+  FE + E++  +++ M+ AY +N    +A 
Sbjct: 271 ------------NAMMVGFGQRGMVDAAKTVFEKMCERDDGTWSAMIKAYEQNEFLMEAL 318

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
               E+   GV  +  +  S+L+  +++  +  G ++HA +++  F+ +    +ALI+MY
Sbjct: 319 STFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVFAVSALITMY 378

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
            +C N++ A +VF   E ++++ W SMITG+A+HG   +AL IF+ M   G+ P+GITYI
Sbjct: 379 IKCGNLDKAKRVFHTFEPKDIVMWNSMITGYAQHGLGEQALGIFHDMRLAGMSPDGITYI 438

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
             L+ACS+ G + EG + F SM     I    EHY+CMVDLLGRSG + EA + I++MP+
Sbjct: 439 GALTACSYTGKVKEGREIFNSMTVNSSIRPGAEHYSCMVDLLGRSGLVEEAFDLIKNMPV 498

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
             D ++W   +GACR+H + E+ + AA+ +LE +P +   ++LLS++Y S G WE  + +
Sbjct: 499 EPDAVIWGALMGACRMHRNAEIAEFAAKKLLELEPGNAGPYVLLSHIYTSVGRWEDASKM 558

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPD 773
           RK +  RNL K  GCSWIE D +VH F  G+  +HP+   I   L++L   + E GY  D
Sbjct: 559 RKFISSRNLNKSPGCSWIEYDKRVHLFTSGDVLAHPEHAAILRILEKLDGLLMESGYSAD 618

Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
            +FVLH+++EEQK   L  HSE+ AVA+GL+   +  PIRV KNLRVCGDCH+AIK I+ 
Sbjct: 619 GSFVLHDIDEEQKSHSLRYHSERQAVAYGLLKIPEGMPIRVMKNLRVCGDCHSAIKLIAK 678

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +T REI+LRD+NRFHH KDG CSC DYW
Sbjct: 679 ITSREIILRDANRFHHFKDGFCSCRDYW 706



 Score =  129 bits (325), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 118/467 (25%), Positives = 220/467 (47%), Gaps = 56/467 (11%)

Query: 25  RQNLPPSS----SPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDT 80
           RQ LP ++    S PF   P +    ++ L  ++  G +  AI     M ++ NH    +
Sbjct: 93  RQTLPDAAAALASIPF---PPSVVSFTSLLRGYVRHGLLADAIRLFQQMPER-NHV---S 145

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y++LL   + +   +  + +   +     + + V   +++S Y + G + EA  +F  M 
Sbjct: 146 YTVLLGGLLDAGRVNEARRLFDEMP----DRDVVAWTAMLSGYCQAGRITEARALFDEM- 200

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            KR++VSW++MIS Y   G+   A  +F  M E     NE  ++A++        +  GH
Sbjct: 201 PKRNVVSWTAMISGYAQNGEVNLARKLFEVMPER----NEVSWTAML-----VGYIQAGH 251

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
           +     L     +  V    A++  F  +G VD  +A  VF+KM E++   W+ MI    
Sbjct: 252 VEDAAELFNAMPEHPVAACNAMMVGFGQRGMVD--AAKTVFEKMCERDDGTWSAMIKAYE 309

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q     +A+  F +M+  G  P+  ++  +++ C+ L +   G+++H+  +R    +DV 
Sbjct: 310 QNEFLMEALSTFREMLWRGVRPNYPSVISILTVCAALAVLDYGREVHAAMLRCSFDMDVF 369

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
              +L+ MY KC   G++D +++VF      +++ W ++ITGY Q  G  ++A+ +F DM
Sbjct: 370 AVSALITMYIKC---GNLDKAKRVFHTFEPKDIVMWNSMITGYAQH-GLGEQALGIFHDM 425

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL-DDCVGNS---------- 428
               ++P+  T+   L AC            YT  VK GR + +    NS          
Sbjct: 426 RLAGMSPDGITYIGALTACS-----------YTGKVKEGREIFNSMTVNSSIRPGAEHYS 474

Query: 429 -LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKA 473
            ++ +  RSG +E+A    +++  E + V +  ++ A   + N+E A
Sbjct: 475 CMVDLLGRSGLVEEAFDLIKNMPVEPDAVIWGALMGACRMHRNAEIA 521


>gi|357468471|ref|XP_003604520.1| Coatomer subunit beta'-2 [Medicago truncatula]
 gi|355505575|gb|AES86717.1| Coatomer subunit beta'-2 [Medicago truncatula]
          Length = 1033

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 228/658 (34%), Positives = 383/658 (58%), Gaps = 8/658 (1%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           PN   LNS +    K G + EA  +F  M + RD +SW+++I+ YVN     +A+ +F  
Sbjct: 82  PNMPELNSQLKQLMKLGKICEARDMFNKMSH-RDEISWTNLIAGYVNAANSNEALILFSN 140

Query: 171 M-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           M ++ G   +++  S  ++AC+   NV  G +++GF +K G  +S V V  AL+DM++K 
Sbjct: 141 MWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSVKSGLINS-VFVSSALVDMYMKV 199

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
               E    VF+ MT +N V WT +I      GC  D +  F +M  S    D  T +  
Sbjct: 200 G-KTEQGCSVFENMTTRNVVSWTAVIVGLVHAGCSLDGLSYFSEMWRSKVGYDSHTFAVA 258

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + A +E  L   GK +H+  I+ G      V  +L  MY+KC      D   ++F +M  
Sbjct: 259 LKASAESGLLHYGKAIHAQTIKQGFNETAYVVNTLGTMYSKCR---KPDYVMRLFGKMST 315

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT +I  YVQ G  ++ A+  F  M +  V+PN +TFASV+ AC NL  +   EQ
Sbjct: 316 PDVVSWTNLIMTYVQMGDEER-ALDAFKRMRKSDVSPNEYTFASVISACANLAITKWGEQ 374

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           ++ HA++ G      V NS+I++Y++ G +++A   F+ +  K+++S++T++  Y +  +
Sbjct: 375 IHGHALRLGLVDALSVSNSIITLYSKCGLLQEASLVFDGMTRKDIISWSTIISVYCQGSH 434

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
           +++AF  L  +   G   + +  AS+LS   S+  +  G+Q+HA  +  G +    +++A
Sbjct: 435 AKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLEPGKQVHAYALCIGLDHETMVHSA 494

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LISMYSR  N++ A ++F  +++ +++SWT+MI G+A+HG++  A+ +F  + + G+ P+
Sbjct: 495 LISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYAEHGYSQEAISLFENISSVGLMPD 554

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T+I +L+AC+HAGL+  G+ +++ M +E+ I    EHY C++DLL R+G L+EA   +
Sbjct: 555 YVTFIGILTACNHAGLVDLGFYYYKLMTNEYQIAPSKEHYGCIIDLLCRAGRLSEAEHMV 614

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
           R+MP   D +VW T L ACR HGD +    AAE +L   P    AHI L+N+Y+++G  E
Sbjct: 615 RNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQMLRLHPNSAGAHITLANIYSASGRRE 674

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKE 767
             A++RK MK + +IKE G SWI ++++++ F  G  SHP + +I   L+ L   I +
Sbjct: 675 EAAHVRKLMKSKGVIKEPGWSWINSNDQLNTFVAGVQSHPLSKQITTILELLRTSIGD 732



 Score =  216 bits (550), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 163/635 (25%), Positives = 307/635 (48%), Gaps = 29/635 (4%)

Query: 47  SNRLIYHLNDGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT 105
           +N +  ++N     +A+    ++    G   D    S+ LK+C    N + G+L+H    
Sbjct: 119 TNLIAGYVNAANSNEALILFSNMWVDSGLQKDQFVVSVALKACALGMNVYFGELLHGFSV 178

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
           +S L  +  + ++L+ +Y K G   +   +F++M   R++VSW+++I   V+ G  +D +
Sbjct: 179 KSGLINSVFVSSALVDMYMKVGKTEQGCSVFENM-TTRNVVSWTAVIVGLVHAGCSLDGL 237

Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
             F EM       + + F+  ++A + +  +  G  I+   +K G+ ++   V   L  M
Sbjct: 238 SYFSEMWRSKVGYDSHTFAVALKASAESGLLHYGKAIHAQTIKQGFNETAYVVN-TLGTM 296

Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
           + K     +   ++F KM+  + V WT +I    Q+G    A+  F  M  S   P+ +T
Sbjct: 297 YSKCR-KPDYVMRLFGKMSTPDVVSWTNLIMTYVQMGDEERALDAFKRMRKSDVSPNEYT 355

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
            + V+SAC+ L +   G+Q+H  A+R GL   + V  S++ +Y+KC   G + ++  VFD
Sbjct: 356 FASVISACANLAITKWGEQIHGHALRLGLVDALSVSNSIITLYSKC---GLLQEASLVFD 412

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M   +++SW+ II+ Y Q G   KEA    S M +    PN F  ASVL  CG++    
Sbjct: 413 GMTRKDIISWSTIISVYCQ-GSHAKEAFNYLSWMSREGPKPNEFALASVLSVCGSMALLE 471

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
             +QV+ +A+  G   +  V ++LISMY+RSG +++A K F+S+   ++VS+  M++ YA
Sbjct: 472 PGKQVHAYALCIGLDHETMVHSALISMYSRSGNLQEASKIFDSIKNNDIVSWTAMINGYA 531

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE---- 521
           ++  S++A  L   I   G+     TF  +L+  +  G +  G   + +++ + ++    
Sbjct: 532 EHGYSQEAISLFENISSVGLMPDYVTFIGILTACNHAGLVDLGFYYY-KLMTNEYQIAPS 590

Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYK 580
             H  Y  +I +  R   +  A  + + M    + + W++++     HG   RA+    +
Sbjct: 591 KEH--YGCIIDLLCRAGRLSEAEHMVRNMPFPCDDVVWSTLLRACRDHGDLDRAIWAAEQ 648

Query: 581 MLADGIKPNGI-TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
           ML   + PN    +I + +  S +G   E   H R +    G+++           +  +
Sbjct: 649 MLR--LHPNSAGAHITLANIYSASGRREEA-AHVRKLMKSKGVIKEPGW-----SWINSN 700

Query: 640 GSLTEALEFIRSMPLSADVL----VWRTFLGACRV 670
             L   +  ++S PLS  +     + RT +G  R+
Sbjct: 701 DQLNTFVAGVQSHPLSKQITTILELLRTSIGDARL 735


>gi|297739586|emb|CBI29768.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  429 bits (1104), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/668 (36%), Positives = 369/668 (55%), Gaps = 53/668 (7%)

Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK--------NTVGWTLMI 255
           GFLL   +F +       LI ++ K   DL SA  +FD             N+     M+
Sbjct: 52  GFLLHTPHFLA------RLIILYSKLG-DLHSARTLFDHRHHHHHGHTQAPNSFLCNTML 104

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
                 G   +AI L++ M   G   + FT   V+  C+       G+ +H   +RTG  
Sbjct: 105 RAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFG 164

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D+ V  +LVDMYAKC   G + D+ +VFDRML  +V+ WTA+IT Y Q+  R  +A+ L
Sbjct: 165 SDLFVEAALVDMYAKC---GEIGDAHEVFDRMLIRDVVCWTAMITLYEQAE-RPLKALML 220

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  M +     +  T  SV  A G L D  +A                            
Sbjct: 221 FRKMQEEGFLGDEITAISVASAVGQLGDGRMA---------------------------- 252

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
              +  AR  F+ + E+N +S+N+M+  Y +N     A  L ++++ +    +  T   +
Sbjct: 253 ---ISRARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIM 309

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK--EMEDR 553
           +S  S +G+   G ++H  +I S  + +  + NA++ MY +C +++ A ++F   E+ +R
Sbjct: 310 VSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKCGDLDTAVEMFNNCELGER 369

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +V SW  +I+G+  HG    ALE+F +M  +G++PN IT+ ++LSACSHAGLI EG K F
Sbjct: 370 DVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDITFTSILSACSHAGLIDEGRKCF 429

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             M  +  +   M+HYACMVD+LGR+G L EA   I+ +P      VW   L ACR+HG+
Sbjct: 430 ADM-TKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKIPSRPSDEVWGALLLACRIHGN 488

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
           TELG+ AA  + + +P+    ++L+SN+YA++  W+ V  +R+ MK R L K A  S IE
Sbjct: 489 TELGEIAANNLFQLEPEHTGYYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIE 548

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
              +VH FH  + S P   E+Y +++ LA+++K  GY+PD + VLH++E E K   L  H
Sbjct: 549 FGTEVHGFHTADQSSPYYREVYRKVESLAIEMKMVGYVPDLSCVLHDVEPEDKEHLLNYH 608

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+AVAFG++   +  PI+V KNLRVC DCH A K+IS + GR+I++RD NRFHH + G
Sbjct: 609 SEKLAVAFGIMKMDQGMPIQVTKNLRVCSDCHWAFKFISSIYGRKIIVRDGNRFHHFQGG 668

Query: 854 KCSCNDYW 861
           +CSC DYW
Sbjct: 669 RCSCGDYW 676



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 136/500 (27%), Positives = 236/500 (47%), Gaps = 51/500 (10%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLL-TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           Y  LL+ C         KL+HS L TR  L      L  LI LYSK GDL+ A  +F   
Sbjct: 28  YDHLLQCCTSLTTL---KLIHSSLSTRGFLLHTPHFLARLIILYSKLGDLHSARTLFDHR 84

Query: 140 GNKRDIVSWS-------SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
            +     + +       +M+ +Y N G+  +AI +++ M  +G   N + +  V++ C++
Sbjct: 85  HHHHHGHTQAPNSFLCNTMLRAYANAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCAS 144

Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
                 G +++G +++ G F SD+ V  AL+DM+ K   ++  A++VFD+M  ++ V WT
Sbjct: 145 ELGAVFGEVVHGQVVRTG-FGSDLFVEAALVDMYAKCG-EIGDAHEVFDRMLIRDVVCWT 202

Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
            MIT   Q   P  A+ LF  M   GFL D  T   V SA  +L     G+         
Sbjct: 203 AMITLYEQAERPLKALMLFRKMQEEGFLGDEITAISVASAVGQL---GDGRM-------- 251

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
                                  ++  +R VFDRM + N +SW ++++GY Q+ GR  +A
Sbjct: 252 -----------------------AISRARLVFDRMEERNGISWNSMLSGYTQN-GRPTDA 287

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           + LF+ M   +  PN  T   ++ AC  L   ++  +++   +     +D  + N+++ M
Sbjct: 288 LSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDM 347

Query: 433 YARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           Y + G ++ A + F +  L E+++ S+N ++  Y  + + ++A EL   ++  GV  +  
Sbjct: 348 YMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRMQVEGVEPNDI 407

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
           TF S+LS  S  G I +G +  A + K         Y  ++ M  R   +  AF++ K++
Sbjct: 408 TFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAGFLNEAFRLIKKI 467

Query: 551 EDRNVIS-WTSMITGFAKHG 569
             R     W +++     HG
Sbjct: 468 PSRPSDEVWGALLLACRIHG 487



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 144/566 (25%), Positives = 238/566 (42%), Gaps = 98/566 (17%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           N GR  +AI     M + G   +  TY  +LK C        G++VH  + R+    +  
Sbjct: 109 NAGRSYEAIDLYIYMQRMGVGVNNFTYPFVLKVCASELGAVFGEVVHGQVVRTGFGSDLF 168

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  +L+ +Y+KCG++ +A+++F  M   RD+V W++MI+ Y    + + A+ +F +M E 
Sbjct: 169 VEAALVDMYAKCGEIGDAHEVFDRM-LIRDVVCWTAMITLYEQAERPLKALMLFRKMQEE 227

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           GF  +E    +V  A                                 +     G + + 
Sbjct: 228 GFLGDEITAISVASA---------------------------------VGQLGDGRMAIS 254

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            A  VFD+M E+N + W  M++  TQ G P DA+ LF  M  S   P+  T   +VSACS
Sbjct: 255 RARLVFDRMEERNGISWNSMLSGYTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACS 314

Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLDHNV 352
            L     G++LH++ I + + +D  +  +++DMY KC   G +D + ++F+   + + +V
Sbjct: 315 YLGSKHLGRKLHNFVISSKMDIDTTLRNAIMDMYMKC---GDLDTAVEMFNNCELGERDV 371

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            SW  +I+GY    G  KEA++LFS M    V PN  TF S+L AC             +
Sbjct: 372 SSWNVLISGY-GVHGHGKEALELFSRMQVEGVEPNDITFTSILSAC-------------S 417

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL----FEKNLVSYNTMVDAYAKNL 468
           HA                      G +++ RK F  +        +  Y  MVD   +  
Sbjct: 418 HA----------------------GLIDEGRKCFADMTKLSVRPEMKHYACMVDMLGRAG 455

Query: 469 NSEKAFELLHEIEDTGVGT--SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
              +AF L+ +I          A   A  + G + +G I               E  H  
Sbjct: 456 FLNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELGEIAANNLFQ-------LEPEHTG 508

Query: 527 YNALISMYSRCAN----VEAAFQVFKEMEDRNVISWTSMITGFAKHGF------AARALE 576
           Y  L+S     +N    VE   Q  K    +   +++ +  G   HGF      +    E
Sbjct: 509 YYVLMSNIYAASNKWKEVEMVRQNMKSRGLKKPAAFSVIEFGTEVHGFHTADQSSPYYRE 568

Query: 577 IFYKMLADGIKPNGITYIAVLSACSH 602
           ++ K+ +  I+   + Y+  LS   H
Sbjct: 569 VYRKVESLAIEMKMVGYVPDLSCVLH 594



 Score = 79.7 bits (195), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 108/217 (49%), Gaps = 9/217 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +  +GR   A+   + M      P+  T  +++ +C    + HLG+ +H+ +  SK++ +
Sbjct: 278 YTQNGRPTDALSLFNQMQASECDPNPVTALIMVSACSYLGSKHLGRKLHNFVISSKMDID 337

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           + + N+++ +Y KCGDL+ A ++F +    +RD+ SW+ +IS Y   G   +A+ +F  M
Sbjct: 338 TTLRNAIMDMYMKCGDLDTAVEMFNNCELGERDVSSWNVLISGYGVHGHGKEALELFSRM 397

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G  PN+  F++++ ACS+   +  G   +  + K           C ++DM  +   
Sbjct: 398 QVEGVEPNDITFTSILSACSHAGLIDEGRKCFADMTKLSVRPEMKHYAC-MVDMLGRAGF 456

Query: 232 DLESAYKVFDKMTEKNTVG-WTLMITRC-----TQLG 262
            L  A+++  K+  + +   W  ++  C     T+LG
Sbjct: 457 -LNEAFRLIKKIPSRPSDEVWGALLLACRIHGNTELG 492


>gi|449435340|ref|XP_004135453.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
 gi|449478665|ref|XP_004155385.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Cucumis sativus]
          Length = 604

 Score =  429 bits (1103), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 219/591 (37%), Positives = 348/591 (58%), Gaps = 10/591 (1%)

Query: 277 SGFLPDRFTLS-----GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
           S F  + F ++      ++S C+ L      KQ+ ++ I+T L  D+ V   L++     
Sbjct: 18  SAFSKNEFVINQLHPLSLLSKCTSLNEL---KQIQAYTIKTNLQSDISVLTKLINFCTLN 74

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
                +D +  +FD++LD +++ +  +  GY +S      A  LF +++   + P+ +TF
Sbjct: 75  PTTSYMDHAHHLFDQILDKDIILFNIMARGYARSNS-PYLAFSLFGELLCSGLLPDDYTF 133

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
           +S+LKAC +         ++  AVK G   +  +  +LI+MYA    M  AR  F+ + +
Sbjct: 134 SSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGVFDEMEQ 193

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
             +VSYN ++  YA++    +A  L  E++ + +  +  T  S++   + +GA+  G+ I
Sbjct: 194 PCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWI 253

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           H  + K GF+    +  ALI M+++C ++  A  +F+ M  R+  +W++MI  FA HG  
Sbjct: 254 HEYVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDG 313

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
            +A+ +F +M  +G++P+ IT++ +L ACSHAGL+ +G  +F SM   +GI   ++HY C
Sbjct: 314 LKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGC 373

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQD 691
           MVDLLGR+G L EA  F+  + + A  ++WRT L AC  HG+ E+ K   E I E D   
Sbjct: 374 MVDLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFELDDAH 433

Query: 692 PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT 751
              +++LSNLYA  G WE V ++RK MK+R ++K  GCS +E +N VH+F  G+  H  +
Sbjct: 434 GGDYVILSNLYARVGRWEDVNHLRKLMKDRGVVKVPGCSSVEVNNVVHEFFSGDGVHCVS 493

Query: 752 LEIYAELDQLALKIKEFGYLPDTNFVLH-ELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
           +E+   LD+L  +IK  GY+PDT+ V H ++EEE K   L  HSEK+A+AFGL++T    
Sbjct: 494 VELRRALDELMKEIKLVGYVPDTSLVYHADMEEEGKELVLRYHSEKLAMAFGLLNTPPGT 553

Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IRV KNLR+CGDCH A K IS + GR+IV+RD  RFH  +DGKCSC D+W
Sbjct: 554 TIRVAKNLRICGDCHNAAKLISFIFGRKIVIRDVQRFHRFEDGKCSCGDFW 604



 Score =  154 bits (388), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/397 (25%), Positives = 201/397 (50%), Gaps = 14/397 (3%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A+ +FD++ +K+ + + +M     +   P  A  LF +++ SG LPD +T S ++ A
Sbjct: 80  MDHAHHLFDQILDKDIILFNIMARGYARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKA 139

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+  +    G  LH +A++ GL  ++ +  +L++MYA+C     ++ +R VFD M    +
Sbjct: 140 CASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECN---DMNAARGVFDEMEQPCI 196

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +S+ AIITGY +S  +  EA+ LF ++    + P   T  SV+ +C  L   ++ + ++ 
Sbjct: 197 VSYNAIITGYARS-SQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGALDLGKWIHE 255

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +  K+G      V  +LI M+A+ G + DA   FE +  ++  +++ M+ A+A + +  K
Sbjct: 256 YVKKKGFDKYVKVNTALIDMFAKCGSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLK 315

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALI 531
           A  +  E++  GV     TF  LL   S  G + +G      + K+ G       Y  ++
Sbjct: 316 AISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYGITPGIKHYGCMV 375

Query: 532 SMYSRCANVEAAFQVFKEMEDRNV-ISWTSMITGFAKHG---FAARALEIFYKMLADGIK 587
            +  R  +++ A+    ++E +   I W ++++  + HG    A R +E  ++ L D   
Sbjct: 376 DLLGRAGHLDEAYNFVDKLEIKATPILWRTLLSACSTHGNVEMAKRVIERIFE-LDDA-- 432

Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
            +G  Y+ + +  +  G   E   H R +  + G+V+
Sbjct: 433 -HGGDYVILSNLYARVGRW-EDVNHLRKLMKDRGVVK 467



 Score =  136 bits (342), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 112/467 (23%), Positives = 220/467 (47%), Gaps = 54/467 (11%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLI---SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           K + +   ++ L+ +  +L  LI   +L      ++ A+ +F  + +K DI+ ++ M   
Sbjct: 46  KQIQAYTIKTNLQSDISVLTKLINFCTLNPTTSYMDHAHHLFDQILDK-DIILFNIMARG 104

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y        A  +F E+L  G  P++Y FS++++AC++++ +  G  ++ F +K G  + 
Sbjct: 105 YARSNSPYLAFSLFGELLCSGLLPDDYTFSSLLKACASSKALREGMGLHCFAVKLG-LNH 163

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           ++ +   LI+M+ + + D+ +A  VFD+M +   V +  +IT   +   P +A+ LF ++
Sbjct: 164 NIYICPTLINMYAECN-DMNAARGVFDEMEQPCIVSYNAIITGYARSSQPNEALSLFREL 222

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
             S   P   T+  V+ +C+ L     GK +H +  + G    V V  +L+DM+AKC   
Sbjct: 223 QASNIEPTDVTMLSVIMSCALLGALDLGKWIHEYVKKKGFDKYVKVNTALIDMFAKC--- 279

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           GS+ D+  +F+ M   +  +W+A+I  +   G   K A+ +F +M +  V P+  TF  +
Sbjct: 280 GSLTDAISIFEGMRVRDTQAWSAMIVAFATHGDGLK-AISMFEEMKREGVRPDEITFLGL 338

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL----- 449
           L AC             +HA                      G +E  R  F S+     
Sbjct: 339 LYAC-------------SHA----------------------GLVEQGRGYFYSMSKTYG 363

Query: 450 FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
               +  Y  MVD   +  + ++A+  + ++E   +  +   + +LLS  S+ G +   +
Sbjct: 364 ITPGIKHYGCMVDLLGRAGHLDEAYNFVDKLE---IKATPILWRTLLSACSTHGNVEMAK 420

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
           ++  RI +   +++   Y  L ++Y+R    E    + K M+DR V+
Sbjct: 421 RVIERIFELD-DAHGGDYVILSNLYARVGRWEDVNHLRKLMKDRGVV 466



 Score =  115 bits (287), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 175/386 (45%), Gaps = 53/386 (13%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+S LLK+C  S+    G  +H    +  L  N  I  +LI++Y++C D+N A  +
Sbjct: 128 PDDYTFSSLLKACASSKALREGMGLHCFAVKLGLNHNIYICPTLINMYAECNDMNAARGV 187

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +  IVS++++I+ Y    +  +A+ +F E+      P +    +VI +C+    
Sbjct: 188 FDEM-EQPCIVSYNAIITGYARSSQPNEALSLFRELQASNIEPTDVTMLSVIMSCALLGA 246

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLM 254
           + +G  I+ ++ K G FD  V V  ALIDMF K GS  L  A  +F+ M  ++T  W+ M
Sbjct: 247 LDLGKWIHEYVKKKG-FDKYVKVNTALIDMFAKCGS--LTDAISIFEGMRVRDTQAWSAM 303

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK-QLHSWAIRTG 313
           I      G    AI +F +M   G  PD  T  G++ ACS   L   G+   +S +   G
Sbjct: 304 IVAFATHGDGLKAISMFEEMKREGVRPDEITFLGLLYACSHAGLVEQGRGYFYSMSKTYG 363

Query: 314 LALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
           +   +   GC +VD+  +    G +D++    D++                         
Sbjct: 364 ITPGIKHYGC-MVDLLGRA---GHLDEAYNFVDKL------------------------- 394

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI-- 430
                     ++      + ++L AC    +  +A++V    ++R   LDD  G   +  
Sbjct: 395 ----------EIKATPILWRTLLSACSTHGNVEMAKRV----IERIFELDDAHGGDYVIL 440

Query: 431 -SMYARSGRMEDARKAFESLFEKNLV 455
            ++YAR GR ED     + + ++ +V
Sbjct: 441 SNLYARVGRWEDVNHLRKLMKDRGVV 466


>gi|222622013|gb|EEE56145.1| hypothetical protein OsJ_05030 [Oryza sativa Japonica Group]
          Length = 742

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 221/614 (35%), Positives = 351/614 (57%), Gaps = 36/614 (5%)

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSEL 296
           ++F  M E++ V +  +IT  +  G P  +++L+  ++      P R TLS ++   S L
Sbjct: 100 RLFASMPERDAVSYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASAL 159

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--------- 347
                G  +H   +R G      VG  LVDMYAK    G + D+R+VF  M         
Sbjct: 160 SDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKM---GLIRDARRVFQEMEAKTVVMYN 216

Query: 348 ----------------------LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
                                 +D + ++WT ++TG  Q+G    EA+ +F  M    V 
Sbjct: 217 TLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNG-LQLEALDVFRRMRAEGVG 275

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            + +TF S+L ACG L      +Q++ +  +     +  VG++L+ MY++   +  A   
Sbjct: 276 IDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAEAV 335

Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
           F  +  +N++S+  M+  Y +N  SE+A     E++  G+    +T  S++S  +++ ++
Sbjct: 336 FRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLASL 395

Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
            +G Q H   + SG      + NAL+++Y +C ++E A ++F EM   + +SWT+++TG+
Sbjct: 396 EEGAQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFHDQVSWTALVTGY 455

Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
           A+ G A   +++F KMLA+G+KP+G+T+I VLSACS AGL+ +G  +F SM  +HGIV  
Sbjct: 456 AQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSACSRAGLVEKGCDYFDSMQKDHGIVPI 515

Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
            +HY CM+DL  RSG   EA EFI+ MP S D   W T L +CR+ G+ E+GK AAE +L
Sbjct: 516 DDHYTCMIDLYSRSGRFKEAEEFIKQMPHSPDAFGWATLLSSCRLRGNMEIGKWAAENLL 575

Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
           E DPQ+PA+++LL +++A+ G W  VA++R+ M++R + KE GCSWI+  NKVH F   +
Sbjct: 576 ETDPQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADD 635

Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
            SHP +  IY +L+ L  K+ E GY PD + VLH++ +  KV  +  HSEK+A+AFGLI 
Sbjct: 636 QSHPFSSRIYEKLEWLNSKMAEEGYKPDVSSVLHDVADADKVHMISHHSEKLAIAFGLIF 695

Query: 806 TSKSKPIRVFKNLR 819
             +  PIR+ KNLR
Sbjct: 696 VPQEMPIRIVKNLR 709



 Score =  195 bits (496), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 141/505 (27%), Positives = 247/505 (48%), Gaps = 70/505 (13%)

Query: 108 KLEPNSVIL-NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
           ++E  +V++ N+LI+   +C  + +A  +F+ M + RD ++W++M++     G Q++A+ 
Sbjct: 206 EMEAKTVVMYNTLITGLLRCKMIEDAKGLFQLMVD-RDSITWTTMVTGLTQNGLQLEALD 264

Query: 167 MFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF 226
           +F  M   G   ++Y F +++ AC     +  G  I+ ++ +  Y D +V VG AL+DM+
Sbjct: 265 VFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYED-NVFVGSALVDMY 323

Query: 227 VK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
            K  S+ L  A  VF +MT +N + WT MI    Q  C  +A+R F +M + G  PD FT
Sbjct: 324 SKCRSIRLAEA--VFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFT 381

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           L  V+S+C+ L     G Q H  A+ +GL   + V  +LV +Y KC   GS++D+ ++FD
Sbjct: 382 LGSVISSCANLASLEEGAQFHCLALVSGLMRYITVSNALVTLYGKC---GSIEDAHRLFD 438

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M  H+ +SWTA++TGY Q  G+ KE + LF  M+   + P+  TF  VL AC       
Sbjct: 439 EMSFHDQVSWTALVTGYAQF-GKAKETIDLFEKMLANGLKPDGVTFIGVLSAC------- 490

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV-----SYNTM 460
                                       +R+G +E     F+S+ + + +      Y  M
Sbjct: 491 ----------------------------SRAGLVEKGCDYFDSMQKDHGIVPIDDHYTCM 522

Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
           +D Y+++   ++A E + ++  +     A+ +A+LLS     G +  G+     ++++  
Sbjct: 523 IDLYSRSGRFKEAEEFIKQMPHS---PDAFGWATLLSSCRLRGNMEIGKWAAENLLETD- 578

Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV--------ISWTSMITGFA----KH 568
             N   Y  L SM++          + + M DR V        I + + +  F+     H
Sbjct: 579 PQNPASYVLLCSMHAAKGQWTEVAHLRRGMRDRQVKKEPGCSWIKYKNKVHIFSADDQSH 638

Query: 569 GFAARALE----IFYKMLADGIKPN 589
            F++R  E    +  KM  +G KP+
Sbjct: 639 PFSSRIYEKLEWLNSKMAEEGYKPD 663



 Score =  168 bits (425), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/374 (28%), Positives = 184/374 (49%), Gaps = 40/374 (10%)

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVL 395
           V D  ++F  M + + +S+ A+ITG+  S G    +V+L+  +++ + V P   T ++++
Sbjct: 95  VPDMERLFASMPERDAVSYNALITGF-SSTGSPARSVQLYRALLREESVRPTRITLSAMI 153

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
                L D  +   V+   ++ G      VG+ L+ MYA+ G + DAR+ F+ +  K +V
Sbjct: 154 MVASALSDRALGHSVHCQVLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVV 213

Query: 456 SYN-------------------------------TMVDAYAKNLNSEKAFELLHEIEDTG 484
            YN                               TMV    +N    +A ++   +   G
Sbjct: 214 MYNTLITGLLRCKMIEDAKGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEG 273

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
           VG   YTF S+L+   ++ A+ +G+QIHA I ++ +E N  + +AL+ MYS+C ++  A 
Sbjct: 274 VGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVFVGSALVDMYSKCRSIRLAE 333

Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
            VF+ M  RN+ISWT+MI G+ ++  +  A+  F +M  DGIKP+  T  +V+S+C++  
Sbjct: 334 AVFRRMTCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMDGIKPDDFTLGSVISSCANLA 393

Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTF 664
            + EG   F  +    G+++ +     +V L G+ GS+ +A      M    D + W   
Sbjct: 394 SLEEG-AQFHCLALVSGLMRYITVSNALVTLYGKCGSIEDAHRLFDEMSFH-DQVSWTAL 451

Query: 665 LGACRVHGDTELGK 678
                V G  + GK
Sbjct: 452 -----VTGYAQFGK 460



 Score =  128 bits (321), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 101/351 (28%), Positives = 165/351 (47%), Gaps = 45/351 (12%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G   +A+     M  +G   D  T+  +L +C        GK +H+ +TR+  E N  
Sbjct: 255 QNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGALAALEEGKQIHAYITRTWYEDNVF 314

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           + ++L+ +YSKC  +  A  +F+ M   R+I+SW++MI  Y       +A+  F EM   
Sbjct: 315 VGSALVDMYSKCRSIRLAEAVFRRM-TCRNIISWTAMIVGYGQNACSEEAVRAFSEMQMD 373

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDL 233
           G  P+++   +VI +C+N  ++  G   +   L  G     + V  AL+ ++ K GS+  
Sbjct: 374 GIKPDDFTLGSVISSCANLASLEEGAQFHCLALVSGLMRY-ITVSNALVTLYGKCGSI-- 430

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
           E A+++FD+M+  + V WT ++T   Q G  ++ I LF  M+ +G  PD  T  GV+SAC
Sbjct: 431 EDAHRLFDEMSFHDQVSWTALVTGYAQFGKAKETIDLFEKMLANGLKPDGVTFIGVLSAC 490

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM 353
           S                R GL   V  GC   D   K      +DD              
Sbjct: 491 S----------------RAGL---VEKGCDYFDSMQKDHGIVPIDD-------------- 517

Query: 354 SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL 401
            +T +I  Y +S GR KEA +    M     +P+ F +A++L +C   GN+
Sbjct: 518 HYTCMIDLYSRS-GRFKEAEEFIKQMPH---SPDAFGWATLLSSCRLRGNM 564



 Score = 89.4 bits (220), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 67/306 (21%), Positives = 136/306 (44%), Gaps = 73/306 (23%)

Query: 427 NSLISMYARSGRMEDARKAF---------------------------ESLF----EKNLV 455
           N L++ YA+SGR+  AR+ F                           E LF    E++ V
Sbjct: 52  NHLLTAYAKSGRLARARRVFDEMPDPNLFTRNALLSALAHSRLVPDMERLFASMPERDAV 111

Query: 456 SYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           SYN ++  ++   +  ++ +L    + +  V  +  T ++++  AS++     G  +H +
Sbjct: 112 SYNALITGFSSTGSPARSVQLYRALLREESVRPTRITLSAMIMVASALSDRALGHSVHCQ 171

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME----------------------- 551
           +++ GF +   + + L+ MY++   +  A +VF+EME                       
Sbjct: 172 VLRLGFGAYAFVGSPLVDMYAKMGLIRDARRVFQEMEAKTVVMYNTLITGLLRCKMIEDA 231

Query: 552 --------DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
                   DR+ I+WT+M+TG  ++G    AL++F +M A+G+  +  T+ ++L+AC   
Sbjct: 232 KGLFQLMVDRDSITWTTMVTGLTQNGLQLEALDVFRRMRAEGVGIDQYTFGSILTACGAL 291

Query: 604 GLISEGWKHF----RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
             + EG +      R+ Y+++  V      + +VD+  +  S+  A    R M    +++
Sbjct: 292 AALEEGKQIHAYITRTWYEDNVFVG-----SALVDMYSKCRSIRLAEAVFRRMTCR-NII 345

Query: 660 VWRTFL 665
            W   +
Sbjct: 346 SWTAMI 351


>gi|356528388|ref|XP_003532785.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Glycine max]
          Length = 721

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 237/632 (37%), Positives = 356/632 (56%), Gaps = 15/632 (2%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS--GVV 290
           L  A  +F ++  K+ V W  +I  C   G    A +LF +M      P R  +S   +V
Sbjct: 102 LREAIDLFRRIPFKDVVSWNSIIKGCLHCGDIVTARKLFDEM------PRRTVVSWTTLV 155

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
                L +    + L  WA+   +  DV    +++  Y     +G VDD+ ++F +M   
Sbjct: 156 DGLLRLGIVQEAETLF-WAMEP-MDRDVAAWNAMIHGYCS---NGRVDDALQLFCQMPSR 210

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +V+SW+++I G +   G+ ++A+ LF DM+   V  +       L A   +    V  Q+
Sbjct: 211 DVISWSSMIAG-LDHNGKSEQALVLFRDMVASGVCLSSGVLVCGLSAAAKIPAWRVGIQI 269

Query: 411 YTHAVKRGRA-LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           +    K G    D+ V  SL++ YA   +ME A + F  +  K++V +  ++  Y  N  
Sbjct: 270 HCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACRVFGEVVYKSVVIWTALLTGYGLNDK 329

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A E+  E+    V  +  +F S L+    +  I +G+ IHA  +K G ES   +  +
Sbjct: 330 HREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLESGGYVGGS 389

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L+ MYS+C  V  A  VFK + ++NV+SW S+I G A+HG    AL +F +ML +G+ P+
Sbjct: 390 LVVMYSKCGYVSDAVYVFKGINEKNVVSWNSVIVGCAQHGCGMWALALFNQMLREGVDPD 449

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
           GIT   +LSACSH+G++ +    FR    +  +   +EHY  MVD+LGR G L EA   +
Sbjct: 450 GITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCGELEEAEAVV 509

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
            SMP+ A+ +VW   L ACR H + +L K AA  I E +P   AA++LLSNLYAS+  W 
Sbjct: 510 MSMPMKANSMVWLALLSACRKHSNLDLAKRAANQIFEIEPDCSAAYVLLSNLYASSSRWA 569

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            VA IR++MK   ++K+ G SW+    + HKF   + SHP   +IY +L+ L +K+KE G
Sbjct: 570 EVALIRRKMKHNGVVKKPGSSWLTLKGQKHKFLSADRSHPLAEKIYQKLEWLGVKLKELG 629

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y+PD  F LH++E EQK + L  HSE++A+AFGL+ST +   I V KNLRVCGDCH AIK
Sbjct: 630 YVPDQQFALHDVETEQKEEMLSYHSERLAIAFGLLSTVEGSAITVMKNLRVCGDCHNAIK 689

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            ++ +  REIV+RDS+RFH  K+G CSC DYW
Sbjct: 690 LMAKIVDREIVVRDSSRFHDFKNGICSCGDYW 721



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 195/390 (50%), Gaps = 13/390 (3%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N++I  Y   G +++A ++F  M + RD++SWSSMI+   + GK   A+ +F +M+  G 
Sbjct: 185 NAMIHGYCSNGRVDDALQLFCQMPS-RDVISWSSMIAGLDHNGKSEQALVLFRDMVASGV 243

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
           C +       + A +      +G  I+  + K G +  D  V  +L+  F  G   +E+A
Sbjct: 244 CLSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVT-FYAGCKQMEAA 302

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            +VF ++  K+ V WT ++T        R+A+ +F +M+    +P+  + +  +++C  L
Sbjct: 303 CRVFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGL 362

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
           E    GK +H+ A++ GL     VG SLV MY+KC   G V D+  VF  + + NV+SW 
Sbjct: 363 EDIERGKVIHAAAVKMGLESGGYVGGSLVVMYSKC---GYVSDAVYVFKGINEKNVVSWN 419

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTH-AV 415
           ++I G  Q G     A+ LF+ M++  V P+  T   +L AC +      A   + +   
Sbjct: 420 SVIVGCAQHGC-GMWALALFNQMLREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQ 478

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SE 471
           KR   L      S++ +  R G +E+A     S+  + N + +  ++ A  K+ N   ++
Sbjct: 479 KRSVTLTIEHYTSMVDVLGRCGELEEAEAVVMSMPMKANSMVWLALLSACRKHSNLDLAK 538

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASS 501
           +A   + EIE     ++AY   S L  +SS
Sbjct: 539 RAANQIFEIEPD--CSAAYVLLSNLYASSS 566



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 86/367 (23%), Positives = 174/367 (47%), Gaps = 37/367 (10%)

Query: 336 SVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVL 395
           S+D++R +FD++   +V  +T ++  Y Q+  R +EA+ LF  +    V     ++ S++
Sbjct: 70  SLDEARAIFDQIPTPHVSLYTIMLHAYAQN-HRLREAIDLFRRIPFKDVV----SWNSII 124

Query: 396 KACGNLLDSNVAEQVYTHAVKRGRA-----------------------------LDDCVG 426
           K C +  D   A +++    +R                                 D    
Sbjct: 125 KGCLHCGDIVTARKLFDEMPRRTVVSWTTLVDGLLRLGIVQEAETLFWAMEPMDRDVAAW 184

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N++I  Y  +GR++DA + F  +  ++++S+++M+     N  SE+A  L  ++  +GV 
Sbjct: 185 NAMIHGYCSNGRVDDALQLFCQMPSRDVISWSSMIAGLDHNGKSEQALVLFRDMVASGVC 244

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALISMYSRCANVEAAFQ 545
            S+      LS A+ I A   G QIH  + K G +  +  +  +L++ Y+ C  +EAA +
Sbjct: 245 LSSGVLVCGLSAAAKIPAWRVGIQIHCSVFKLGDWHFDEFVSASLVTFYAGCKQMEAACR 304

Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
           VF E+  ++V+ WT+++TG+  +     ALE+F +M+   + PN  ++ + L++C     
Sbjct: 305 VFGEVVYKSVVIWTALLTGYGLNDKHREALEVFGEMMRIDVVPNESSFTSALNSCCGLED 364

Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
           I  G K   +   + G+         +V +  + G +++A+   + +    +V+ W + +
Sbjct: 365 IERG-KVIHAAAVKMGLESGGYVGGSLVVMYSKCGYVSDAVYVFKGIN-EKNVVSWNSVI 422

Query: 666 GACRVHG 672
             C  HG
Sbjct: 423 VGCAQHG 429



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 51/210 (24%), Positives = 106/210 (50%), Gaps = 4/210 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LND + ++A+     M +    P+  +++  L SC    +   GK++H+   +  LE 
Sbjct: 324 YGLND-KHREALEVFGEMMRIDVVPNESSFTSALNSCCGLEDIERGKVIHAAAVKMGLES 382

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              +  SL+ +YSKCG +++A  +FK + N++++VSW+S+I      G  + A+ +F +M
Sbjct: 383 GGYVGGSLVVMYSKCGYVSDAVYVFKGI-NEKNVVSWNSVIVGCAQHGCGMWALALFNQM 441

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
           L  G  P+    + ++ ACS++  +      + +  +       +    +++D+  +   
Sbjct: 442 LREGVDPDGITVTGLLSACSHSGMLQKARCFFRYFGQKRSVTLTIEHYTSMVDVLGRCG- 500

Query: 232 DLESAYKVFDKMTEK-NTVGWTLMITRCTQ 260
           +LE A  V   M  K N++ W  +++ C +
Sbjct: 501 ELEEAEAVVMSMPMKANSMVWLALLSACRK 530



 Score = 41.2 bits (95), Expect = 2.3,   Method: Compositional matrix adjust.
 Identities = 34/164 (20%), Positives = 74/164 (45%), Gaps = 9/164 (5%)

Query: 513 ARIIKSGFESNHC-IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
           AR I     + H  +Y  ++  Y++   +  A  +F+ +  ++V+SW S+I G    G  
Sbjct: 74  ARAIFDQIPTPHVSLYTIMLHAYAQNHRLREAIDLFRRIPFKDVVSWNSIIKGCLHCGDI 133

Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
             A ++F +M    +    +++  ++      G++ E    F +M     + + +  +  
Sbjct: 134 VTARKLFDEMPRRTV----VSWTTLVDGLLRLGIVQEAETLFWAM---EPMDRDVAAWNA 186

Query: 632 MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M+     +G + +AL+    MP S DV+ W + +     +G +E
Sbjct: 187 MIHGYCSNGRVDDALQLFCQMP-SRDVISWSSMIAGLDHNGKSE 229


>gi|224124674|ref|XP_002330082.1| predicted protein [Populus trichocarpa]
 gi|222871507|gb|EEF08638.1| predicted protein [Populus trichocarpa]
          Length = 665

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 241/662 (36%), Positives = 372/662 (56%), Gaps = 47/662 (7%)

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSV-DLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           ++   L+ G+F  D  V   L+  +      +L  A KVF+ +   N   + ++I  C Q
Sbjct: 49  VHAVALRTGHF-QDHYVSGTLVKCYANPHFSNLNFALKVFEYVPNPNVFVFNIIIKGCLQ 107

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
              P  AI  +  M+++   P++FT   +  AC+  E    G Q+H+  I+ GL+ DV +
Sbjct: 108 NNEPCKAICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHI 167

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK-LFSDM 379
             + + MY      G V+ +R++     + +V+ + A+I GY++ G  + EA K LF  M
Sbjct: 168 RSAGIQMYGSF---GEVEGARRMLGEDGNSDVICFNAMIDGYLKCG--EVEAAKELFWSM 222

Query: 380 IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM 439
                                  D NV                    N ++S  A+ G +
Sbjct: 223 ----------------------EDKNVGSW-----------------NVMVSGMAKCGMI 243

Query: 440 EDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGA 499
           E+AR+ F  + EKN +S++ M+D Y K    ++A E+ + ++   +    +  +S+L+  
Sbjct: 244 EEARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAAC 303

Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
           +++GA+ +G  IHA +  +    +  +  AL+ MY++C  ++ A+ VF++ME + V +W 
Sbjct: 304 ANLGALDQGRWIHAYVNNNSNSFDAVLGTALVDMYAKCGRLDMAWDVFEKMEKKEVFTWN 363

Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +MI G   HG A  A+E+F+KM     +PNGIT + VLSAC+H+G++ EG + F SM + 
Sbjct: 364 AMICGLGMHGRAEDAIELFFKMQKQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEV 423

Query: 620 HGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKH 679
           +GI   MEHY C+VDLLGR+G L EA E + SMP+     VW   LGACR HGD ELG+ 
Sbjct: 424 YGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMPMEPSAAVWGALLGACRKHGDVELGER 483

Query: 680 AAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
             +++LE +PQ+   + LLSN+YA AG W+ VAN+RK MKER +    G S I+ D  VH
Sbjct: 484 VGKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLMKERGVKTSTGISMIDFDGVVH 543

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           +F +G+ SHP+   IY  L  +  ++K  G+ P+T+ VL ++EEE+K   L  HSEK+A+
Sbjct: 544 EFKMGDGSHPQMKNIYLMLKNMIKRLKMEGFSPNTSQVLFDIEEEEKEAELQYHSEKLAI 603

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
           AFGLI+T     I V KNLR+C DCH+A K IS V  REI++RD  R+HH K G CSC D
Sbjct: 604 AFGLINTKPGTTIHVVKNLRMCEDCHSAFKLISQVYDREIIVRDRARYHHFKTGTCSCKD 663

Query: 860 YW 861
           +W
Sbjct: 664 FW 665



 Score =  145 bits (366), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 110/406 (27%), Positives = 183/406 (45%), Gaps = 50/406 (12%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
           KQ+H+ A+RTG   D  V  +LV  YA      +++ + KVF+ + + NV  +  II G 
Sbjct: 47  KQVHAVALRTGHFQDHYVSGTLVKCYANPHFS-NLNFALKVFEYVPNPNVFVFNIIIKGC 105

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
           +Q+    K A+  +  M+     PN FT+ ++ KAC     +    QV+ H +K+G + D
Sbjct: 106 LQNNEPCK-AICCYYKMMIAHARPNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGD 164

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
             + ++ I MY   G +E AR+        +++ +N M+D Y K    E A EL   +ED
Sbjct: 165 VHIRSAGIQMYGSFGEVEGARRMLGEDGNSDVICFNAMIDGYLKCGEVEAAKELFWSMED 224

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
             VG+                                       +N ++S  ++C  +E 
Sbjct: 225 KNVGS---------------------------------------WNVMVSGMAKCGMIEE 245

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
           A ++F EM+++N ISW++MI G+ K G+   ALE+F  M  + I+P      +VL+AC++
Sbjct: 246 ARELFNEMKEKNEISWSAMIDGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACAN 305

Query: 603 AGLISEG-WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
            G + +G W H     + +     +     +VD+  + G L  A +    M    +V  W
Sbjct: 306 LGALDQGRWIHAYVNNNSNSFDAVLG--TALVDMYAKCGRLDMAWDVFEKME-KKEVFTW 362

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQD--PAAHILLSNLYASA 705
              +    +HG  E    A E+  +   Q   P    LL  L A A
Sbjct: 363 NAMICGLGMHGRAE---DAIELFFKMQKQKFRPNGITLLGVLSACA 405



 Score =  134 bits (337), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 117/491 (23%), Positives = 209/491 (42%), Gaps = 90/491 (18%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  TY  L K+C  +     G  VH+ + +  L  +  I ++ I +Y   G++  A ++
Sbjct: 128 PNKFTYPTLFKACTAAEAAEEGVQVHAHVIKQGLSGDVHIRSAGIQMYGSFGEVEGARRM 187

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
               GN  D++ +++MI  Y+  G+   A  +F  M                      +N
Sbjct: 188 LGEDGNS-DVICFNAMIDGYLKCGEVEAAKELFWSM--------------------EDKN 226

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           V   +++   + KCG                      +E A ++F++M EKN + W+ MI
Sbjct: 227 VGSWNVMVSGMAKCGM---------------------IEEARELFNEMKEKNEISWSAMI 265

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
               + G  ++A+ +F  M      P +F LS V++AC+ L     G+ +H++      +
Sbjct: 266 DGYIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNS 325

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            D  +G +LVDMYAKC   G +D +  VF++M    V +W A+I G +   GR ++A++L
Sbjct: 326 FDAVLGTALVDMYAKC---GRLDMAWDVFEKMEKKEVFTWNAMICG-LGMHGRAEDAIEL 381

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  M + +  PN  T   VL AC                                   A 
Sbjct: 382 FFKMQKQKFRPNGITLLGVLSAC-----------------------------------AH 406

Query: 436 SGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAY 490
           SG +++  + F S+      E  +  Y  +VD   +     +A E+++ +    +  SA 
Sbjct: 407 SGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLLGEAEEVMYSMP---MEPSAA 463

Query: 491 TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
            + +LL      G +  GE++  +I+      N   Y  L ++Y+R    +    V K M
Sbjct: 464 VWGALLGACRKHGDVELGERV-GKILLELEPQNSGRYALLSNIYARAGRWDDVANVRKLM 522

Query: 551 EDRNVISWTSM 561
           ++R V + T +
Sbjct: 523 KERGVKTSTGI 533



 Score = 70.1 bits (170), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 44/210 (20%), Positives = 101/210 (48%), Gaps = 1/210 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G  ++A+   ++M ++   P     S +L +C        G+ +H+ +  +    +
Sbjct: 268 YIKGGYYKEALEVFNVMQREEIRPRKFVLSSVLAACANLGALDQGRWIHAYVNNNSNSFD 327

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           +V+  +L+ +Y+KCG L+ A  +F+ M  K+++ +W++MI      G+  DAI +F +M 
Sbjct: 328 AVLGTALVDMYAKCGRLDMAWDVFEKM-EKKEVFTWNAMICGLGMHGRAEDAIELFFKMQ 386

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           +  F PN      V+ AC+++  V  G  I+  + +    +  +     ++D+  +  + 
Sbjct: 387 KQKFRPNGITLLGVLSACAHSGMVDEGLRIFNSMEEVYGIEPGMEHYGCVVDLLGRAGLL 446

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
            E+   ++    E +   W  ++  C + G
Sbjct: 447 GEAEEVMYSMPMEPSAAVWGALLGACRKHG 476


>gi|297848224|ref|XP_002891993.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297337835|gb|EFH68252.1| hypothetical protein ARALYDRAFT_337864 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 950

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 256/746 (34%), Positives = 395/746 (52%), Gaps = 71/746 (9%)

Query: 120 ISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPN 179
           IS  S+ G +NEA K F S+  K  I SW+S++S Y   G   +A  MF EM E      
Sbjct: 24  ISRLSRIGQINEARKFFDSLRYK-AIGSWNSIVSGYFANGLPREARQMFDEMPE------ 76

Query: 180 EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
                                              ++     L+  ++K  + +E A  V
Sbjct: 77  ----------------------------------RNIVSWNGLVSGYIKNRM-IEEARNV 101

Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
           F+ M E+N V WT M+    Q G   +A  LF  M      P+R  +S  V       +F
Sbjct: 102 FEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRM------PERNEVSWTV-------MF 148

Query: 300 TSGKQLHSWAIRTGLAL-DVCVGCSLV---DMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
             G  +    I     L D+  G  +V   +M      +G VD++R++FD M + NV++W
Sbjct: 149 --GGLIDGGRIDDARKLYDMMPGKDVVASTNMIGGLCREGRVDEAREIFDEMRERNVITW 206

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           T +ITGY Q+  R   A KLF      +V P     +      G  L   + +      V
Sbjct: 207 TTMITGYGQNK-RVDVARKLF------EVMPEKTEVSWTSMLLGYTLSGRIEDAEEFFEV 259

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
              + +  C  N++I      G +  AR+ F+ + +++  ++  M+ AY +     +A E
Sbjct: 260 MPMKPVIAC--NAMIVALGEVGEIVKARRVFDQMEDRDNATWRGMIKAYERKGFELEALE 317

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           L  +++  GV  S  +  S+LS  +++ ++  G Q+HA +++  F+ +  + + L++MY 
Sbjct: 318 LFAQMQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYV 377

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +C  +  A  VF     +++I W S+I+G+A HG    AL++F++M   G  PN +T IA
Sbjct: 378 KCGELVKAKLVFDRFPSKDIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIA 437

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +L+ACS+ G + EG + F SM  +  +   +EHY+C VD+LGR+G + +A+E I SM + 
Sbjct: 438 ILTACSYGGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRAGKVDKAMELINSMTIK 497

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            D  VW   LGAC+ H   +L + AA+ + E +P++   +ILLS++ AS   W  VA +R
Sbjct: 498 PDATVWGALLGACKTHSRLDLAEVAAKKLFEIEPENAGPYILLSSINASRSKWGDVAEMR 557

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPDT 774
           K M+ +N+ K  GCSWIE   KVH F  G   +HP+   I   L++    ++E GY PD 
Sbjct: 558 KNMRTKNVSKFPGCSWIEVGKKVHMFTRGGIRNHPEQAMILMMLEKTDGLLREAGYSPDC 617

Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
           + VLH+++EE+KV  L +HSE++AVA+GL+   +  PIRV KNLRVCGDCH AIK IS V
Sbjct: 618 SHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMKNLRVCGDCHAAIKLISKV 677

Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDY 860
           T REI+LRD+NRFHH  +G+CSC DY
Sbjct: 678 TEREIILRDANRFHHFNNGECSCRDY 703



 Score =  141 bits (356), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 132/518 (25%), Positives = 234/518 (45%), Gaps = 43/518 (8%)

Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
           E N V  N L+S Y K   + EA  +F+ M  +R++VSW++M+  YV  G  V+A  +F 
Sbjct: 76  ERNIVSWNGLVSGYIKNRMIEEARNVFEIM-PERNVVSWTAMVKGYVQEGMVVEAELLFW 134

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
            M E     NE  ++ +     +   +     +Y  +        DV     +I    + 
Sbjct: 135 RMPE----RNEVSWTVMFGGLIDGGRIDDARKLYDMMP-----GKDVVASTNMIGGLCRE 185

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G VD   A ++FD+M E+N + WT MIT   Q      A +LF  M      P++     
Sbjct: 186 GRVD--EAREIFDEMRERNVITWTTMITGYGQNKRVDVARKLFEVM------PEKTE--- 234

Query: 289 VVSACSELELFT-SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
            VS  S L  +T SG+   +      + +   + C+   M       G +  +R+VFD+M
Sbjct: 235 -VSWTSMLLGYTLSGRIEDAEEFFEVMPMKPVIACNA--MIVALGEVGEIVKARRVFDQM 291

Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
            D +  +W  +I  Y +  G + EA++LF+ M +  V P+  +  S+L  C  L      
Sbjct: 292 EDRDNATWRGMIKAY-ERKGFELEALELFAQMQRQGVRPSFPSLISILSVCATLASLQYG 350

Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
            QV+ H V+     D  V + L++MY + G +  A+  F+    K+++ +N+++  YA +
Sbjct: 351 RQVHAHLVRCQFDGDVYVASVLMTMYVKCGELVKAKLVFDRFPSKDIIMWNSIISGYASH 410

Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI- 526
              E+A ++ HE+  +G   +  T  ++L+  S  G + +G +I         ES  C+ 
Sbjct: 411 GLGEEALKVFHEMPLSGTMPNKVTLIAILTACSYGGKLEEGLEIF-----ESMESKFCVT 465

Query: 527 -----YNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYK 580
                Y+  + M  R   V+ A ++   M  + +   W +++     H     A E+  K
Sbjct: 466 PTVEHYSCTVDMLGRAGKVDKAMELINSMTIKPDATVWGALLGACKTHSRLDLA-EVAAK 524

Query: 581 MLADGIKPNGITYI---AVLSACSHAGLISEGWKHFRS 615
            L +    N   YI   ++ ++ S  G ++E  K+ R+
Sbjct: 525 KLFEIEPENAGPYILLSSINASRSKWGDVAEMRKNMRT 562



 Score = 73.2 bits (178), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 54/198 (27%), Positives = 96/198 (48%), Gaps = 17/198 (8%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  P   +   +L  C    +   G+ VH+ L R + + +  + + L+++Y KCG+
Sbjct: 322 MQRQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVRCQFDGDVYVASVLMTMYVKCGE 381

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L +A  +F    +K DI+ W+S+IS Y + G   +A+ +F EM   G  PN+    A++ 
Sbjct: 382 LVKAKLVFDRFPSK-DIIMWNSIISGYASHGLGEEALKVFHEMPLSGTMPNKVTLIAILT 440

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL------IDMFVK-GSVDLESAYKVFD 241
           ACS    +  G  I+  +      +S  CV   +      +DM  + G VD   A ++ +
Sbjct: 441 ACSYGGKLEEGLEIFESM------ESKFCVTPTVEHYSCTVDMLGRAGKVD--KAMELIN 492

Query: 242 KMTEK-NTVGWTLMITRC 258
            MT K +   W  ++  C
Sbjct: 493 SMTIKPDATVWGALLGAC 510



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 63/272 (23%), Positives = 112/272 (41%), Gaps = 50/272 (18%)

Query: 417 RGRALDDCVGNSL-ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
           R  +    V NS  IS  +R G++ +ARK F+SL  K + S+N++V  Y  N    +A +
Sbjct: 10  RAYSTSTGVNNSFEISRLSRIGQINEARKFFDSLRYKAIGSWNSIVSGYFANGLPREARQ 69

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           +  E+                                        E N   +N L+S Y 
Sbjct: 70  MFDEMP---------------------------------------ERNIVSWNGLVSGYI 90

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +   +E A  VF+ M +RNV+SWT+M+ G+ + G    A  +F++M     + N +++  
Sbjct: 91  KNRMIEEARNVFEIMPERNVVSWTAMVKGYVQEGMVVEAELLFWRM----PERNEVSWTV 146

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           +       G I +  K +  M  +  +         M+  L R G + EA E    M   
Sbjct: 147 MFGGLIDGGRIDDARKLYDMMPGKDVVAS-----TNMIGGLCREGRVDEAREIFDEMR-E 200

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQ 687
            +V+ W T +     +   ++ +   E++ E+
Sbjct: 201 RNVITWTTMITGYGQNKRVDVARKLFEVMPEK 232


>gi|449434268|ref|XP_004134918.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
 gi|449533166|ref|XP_004173548.1| PREDICTED: pentatricopeptide repeat-containing protein At5g46460,
           mitochondrial-like [Cucumis sativus]
          Length = 712

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/745 (33%), Positives = 381/745 (51%), Gaps = 86/745 (11%)

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N L+S + + G ++EA  +F  M +   +  ++ MI  Y + G+  DA+ +F EM     
Sbjct: 54  NYLLSFHLRNGRIDEARSLFNKMSSP-GVNLYTMMIGGYADEGRLEDALKLFYEMP---- 108

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
             +   ++++++ C                LKCG                     DL  A
Sbjct: 109 VKDLISWNSMLKGC----------------LKCG---------------------DLTMA 131

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             +FDKM+E+N V WT +I    + G    A  LF  M      P +             
Sbjct: 132 CNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRVM------PTK------------- 172

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                               DV    S+V  +     +G V+D+ ++F++M + NV+SWT
Sbjct: 173 --------------------DVTAWNSMVHGFFS---NGRVEDAIELFEKMPNRNVISWT 209

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++I G +   GR  EA+ +F  M+    A +  T A  L AC N+    +  Q++   VK
Sbjct: 210 SVIGG-LDHNGRSFEALVVFHKMLASFKATSS-TLACALTACANICTPFIGVQIHGLIVK 267

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
            G   ++ +  SLIS YA    +++A   F     +N+V +  ++  Y  N     A ++
Sbjct: 268 TGYCFNEYISASLISFYANCKLIDNASSIFNDNVSRNVVVWTALLTGYGLNCRHTDALQV 327

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
              +    V  +  +  S L+    + A+ +G ++HA   K G ES+  + N+L+ MY++
Sbjct: 328 FKGMMRMSVLPNQSSLTSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTK 387

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C ++     VF  M  +NV+SW S+I G A+HGF   AL +F +M+   + P+ IT   +
Sbjct: 388 CGHINDGIAVFTRMSRKNVVSWNSIIVGCAQHGFGRWALTLFAQMIRTRVDPDEITLAGL 447

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           LSAC H+G++++G   F+      GI    EHY+ MVDLLGR G L EA   I  MP  A
Sbjct: 448 LSACGHSGMLTKGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEAEALIHIMPGKA 507

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           + +VW   L +   H +  + + AA+ +L+  P   AA+ LLSNLYAS G W  V+ IRK
Sbjct: 508 NYMVWLALLSSSINHSNVHVAERAAKCVLDLQPNCSAAYTLLSNLYASTGKWTEVSKIRK 567

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
           +MK+  ++K+ G SWI      H F  G+ SHP + +IY +L+ L  K+KE GY+PD  F
Sbjct: 568 KMKDEGILKQPGSSWITIKGIKHNFISGDQSHPLSRKIYQKLEWLGGKLKELGYVPDPKF 627

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
             H++E EQK + L  HSE++A+ FGLIST +   I V KNLR+CGDCH A+K  S V G
Sbjct: 628 SFHDVETEQKEEMLSYHSERLAIGFGLISTVEGSTIIVMKNLRICGDCHNAVKLTSKVVG 687

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REIV+RD +RFHH  +G CSC DYW
Sbjct: 688 REIVVRDPSRFHHFHNGTCSCGDYW 712



 Score =  146 bits (369), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 219/458 (47%), Gaps = 67/458 (14%)

Query: 42  TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNH-------------------------- 75
           T+ P +  L +HL +GR+ +A    + M+  G +                          
Sbjct: 49  TTPPSNYLLSFHLRNGRIDEARSLFNKMSSPGVNLYTMMIGGYADEGRLEDALKLFYEMP 108

Query: 76  -PDLDTYSLLLKSCIRSRNFHLG----------------KLVHSLLTRSKLEPNSVIL-- 116
             DL +++ +LK C++  +  +                  +++ LL   ++E    +   
Sbjct: 109 VKDLISWNSMLKGCLKCGDLTMACNMFDKMSERNVVSWTTIINGLLEFGRVEVAECLFRV 168

Query: 117 ---------NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
                    NS++  +   G + +A ++F+ M N R+++SW+S+I    + G+  +A+ +
Sbjct: 169 MPTKDVTAWNSMVHGFFSNGRVEDAIELFEKMPN-RNVISWTSVIGGLDHNGRSFEALVV 227

Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
           F +ML   F       +  + AC+N     IG  I+G ++K GY  ++  +  +LI  + 
Sbjct: 228 FHKMLA-SFKATSSTLACALTACANICTPFIGVQIHGLIVKTGYCFNEY-ISASLISFYA 285

Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR-DAIRLFLDMILSGFLPDRFTL 286
              + +++A  +F+    +N V WT ++T    L C   DA+++F  M+    LP++ +L
Sbjct: 286 NCKL-IDNASSIFNDNVSRNVVVWTALLTG-YGLNCRHTDALQVFKGMMRMSVLPNQSSL 343

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           +  +++C  LE    G+++H+ A + GL  D+ V  SLV MY KC   G ++D   VF R
Sbjct: 344 TSALNSCCGLEAVDRGREVHAVAHKLGLESDIFVSNSLVVMYTKC---GHINDGIAVFTR 400

Query: 347 MLDHNVMSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           M   NV+SW +II G  Q G GR   A+ LF+ MI+ +V P+  T A +L ACG+     
Sbjct: 401 MSRKNVVSWNSIIVGCAQHGFGR--WALTLFAQMIRTRVDPDEITLAGLLSACGHSGMLT 458

Query: 406 VAEQVYTHAVKR-GRALDDCVGNSLISMYARSGRMEDA 442
                + H  K  G  + +   +S++ +  R G++E+A
Sbjct: 459 KGRCFFKHFGKNFGIEMTNEHYSSMVDLLGRYGQLEEA 496


>gi|413944960|gb|AFW77609.1| hypothetical protein ZEAMMB73_798524 [Zea mays]
          Length = 665

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 234/657 (35%), Positives = 359/657 (54%), Gaps = 81/657 (12%)

Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
           F PD   L     +C  L L    + LH+ A  +GLA D  V  SL+  Y +    G+  
Sbjct: 16  FPPDPHLLPTAFKSCPTLPL---ARALHAVAEVSGLARDPFVASSLLHAYLRL---GTTG 69

Query: 339 DSRKVFDRM--------------------------------------LDHNVMSWTAIIT 360
           ++R +FD M                                      ++ NV++W  +++
Sbjct: 70  NARALFDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVS 129

Query: 361 GYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           G  +SG R ++AV   + M  +G + P+    +  L A G++   +V +Q++ +AVK G 
Sbjct: 130 GLNRSG-RARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGC 188

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFES---------------------------LF-- 450
             D CV  +LI MY + G+  +  + F+                            LF  
Sbjct: 189 RADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKE 248

Query: 451 ------EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
                 E N+VS+ ++V    +N    +A E   E++  G   ++ T   +L   +++ A
Sbjct: 249 FVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAA 308

Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
           +  G   H   ++ GF  +  + +AL+ MY++C  V+ A  +F  M  RNV+SW +MI G
Sbjct: 309 LMHGRSAHCFALRKGFLHDVYVSSALVDMYAKCGRVKDARIIFDTMVSRNVVSWNAMIGG 368

Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQ 624
           +A +G A  A+ +F+ ML    KP+ +T+  +L+AC+ AGL  EG  +F+ M++E+G+  
Sbjct: 369 YAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRHYFKEMHNEYGVSP 428

Query: 625 RMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMI 684
           RMEHYACMV LLGR+G L EA + I  MP   D  +W + LG+CRVHG+ +L + AAE +
Sbjct: 429 RMEHYACMVTLLGRAGKLDEAYDLISDMPFEPDAYIWGSLLGSCRVHGNVDLAEVAAEKL 488

Query: 685 LEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVG 744
              +P++   ++LLSN+YAS   W+ V  +R+ MK+  L KE GCSWIE  NKVH    G
Sbjct: 489 FHLEPENAGNYVLLSNIYASKKMWDRVNRVREMMKDVGLKKEKGCSWIEIKNKVHMLLAG 548

Query: 745 ETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLI 804
           + SHP    I  +++QL +++++ G++P T+FVLH++EE++K   L  HSEK+AVA GLI
Sbjct: 549 DDSHPMMTAIIEKINQLNIQMRKLGFVPSTDFVLHDVEEQEKDDILAVHSEKLAVALGLI 608

Query: 805 STSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           STS    +RV KNLR+CGDCH A+K+IS   GREI +RD+NRFHH   GKCSC D+W
Sbjct: 609 STSPGTTLRVIKNLRICGDCHEAMKFISSFEGREISVRDTNRFHHFSGGKCSCGDFW 665



 Score =  135 bits (339), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 166/395 (42%), Gaps = 80/395 (20%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD        KSC       L + +H++   S L  +  + +SL+  Y + G    A  +
Sbjct: 18  PDPHLLPTAFKSC---PTLPLARALHAVAEVSGLARDPFVASSLLHAYLRLGTTGNARAL 74

Query: 136 FKSMGN-KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG------------------- 175
           F  M   +R +V WS++++++  RG    A  +  EM   G                   
Sbjct: 75  FDGMPRPQRTVVGWSALVAAHAARGDAEGAWRLLEEMRRDGGVEPNVITWNGLVSGLNRS 134

Query: 176 ------------------FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                               P+    S  + A  +   V++G  ++G+ +K G   +D C
Sbjct: 135 GRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAVKAGC-RADAC 193

Query: 218 VGCALIDMFVK--------------GSVDLES----------------AYKVF----DKM 243
           V  ALIDM+ K                +D+ S                A ++F    D+ 
Sbjct: 194 VVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALRLFKEFVDRG 253

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            E N V WT ++  C Q G   +A+  F +M   G  P+  T+  V+ A + +     G+
Sbjct: 254 VELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFANVAALMHGR 313

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
             H +A+R G   DV V  +LVDMYAKC   G V D+R +FD M+  NV+SW A+I GY 
Sbjct: 314 SAHCFALRKGFLHDVYVSSALVDMYAKC---GRVKDARIIFDTMVSRNVVSWNAMIGGYA 370

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
              G    AV +F  M++ +  P+  TF  +L AC
Sbjct: 371 MY-GEAVNAVWMFHSMLKCKQKPDMVTFTCLLAAC 404



 Score = 99.4 bits (246), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 125/293 (42%), Gaps = 38/293 (12%)

Query: 48  NRLIYHLN-DGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLT 105
           N L+  LN  GR + A+  L  M  +G   PD    S  L +        +G+ +H    
Sbjct: 125 NGLVSGLNRSGRARDAVVALATMHGEGLLRPDATGVSCALSAVGDVGLVSVGQQLHGYAV 184

Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKS--------------------------- 138
           ++    ++ ++ +LI +Y KCG   E  ++F                             
Sbjct: 185 KAGCRADACVVTALIDMYGKCGQAAEVVRVFDESSHMDVASCNALIAGLSRNAQVCEALR 244

Query: 139 -------MGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
                   G + ++VSW+S+++  V  GK ++A+  F EM   G  PN      V+ A +
Sbjct: 245 LFKEFVDRGVELNVVSWTSIVACCVQNGKDLEAVEFFREMQAQGTEPNSVTIPCVLPAFA 304

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
           N   +  G   + F L+ G+   DV V  AL+DM+ K    ++ A  +FD M  +N V W
Sbjct: 305 NVAALMHGRSAHCFALRKGFL-HDVYVSSALVDMYAKCG-RVKDARIIFDTMVSRNVVSW 362

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
             MI      G   +A+ +F  M+     PD  T + +++AC++  L   G+ 
Sbjct: 363 NAMIGGYAMYGEAVNAVWMFHSMLKCKQKPDMVTFTCLLAACTQAGLTEEGRH 415


>gi|356524187|ref|XP_003530713.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 244/720 (33%), Positives = 398/720 (55%), Gaps = 29/720 (4%)

Query: 78  LDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           +DT  LL  L++C+ S++   GKL+H  +    L+ +  +  +LI+LY  C   + A  +
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKNLINLYLSCHLYDHAKCV 60

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTE 194
           F +M N  +I  W+ +++ Y      V+A+ +F ++L   +  P+ Y + +V++AC    
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVLKACGGLY 120

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
              +G +I+  L+K G    D+ VG +L+ M+ K +   E A  +F++M EK+   W  +
Sbjct: 121 KYVLGKMIHTCLVKTGLM-MDIVVGSSLVGMYAKCNA-FEKAIWLFNEMPEKDVACWNTV 178

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+   Q G  ++A+  F  M   GF P+  T++  +S+C+ L     G ++H   I +G 
Sbjct: 179 ISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            LD  +  +LVDMY KC   G ++ + +VF++M    V++W ++I+GY   G      ++
Sbjct: 239 LLDSFISSALVDMYGKC---GHLEMAIEVFEQMPKKTVVAWNSMISGYGLKGD-SISCIQ 294

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALDDC-VGNSLISM 432
           LF  M    V P   T +S++  C     + + E  + H    R R   D  + +SL+ +
Sbjct: 295 LFKRMYNEGVKPTLTTLSSLIMVCSR--SARLLEGKFVHGYTIRNRIQSDVFINSSLMDL 352

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y + G++E A   F+ + +  +VS+N M+  Y       +A  L  E+  + V   A TF
Sbjct: 353 YFKCGKVELAENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITF 412

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S+L+  S + A+ KGE+IH  II+   ++N  +  AL+ MY++C  V+ AF VFK +  
Sbjct: 413 TSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPK 472

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           R+++SWTSMIT +  HG A  ALE+F +ML   +KP+ +T++A+LSAC HAGL+ EG  +
Sbjct: 473 RDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYY 532

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP-LSADVLVWRTFLGACRVH 671
           F  M + +GI+ R+EHY+C++DLLGR+G L EA E ++  P +  DV +  T   ACR+H
Sbjct: 533 FNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            + +LG   A  ++++DP D + +ILLSN+YASA  W+ V  +R +MKE  L K  GCSW
Sbjct: 593 RNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSW 652

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLF 791
           IE + K+  F V + SH            L L  K   YL D     H  +E +   Y F
Sbjct: 653 IEINQKILPFFVEDNSHL----------HLELVFKCLSYLSD-----HMEDESKPFTYHF 697



 Score =  223 bits (567), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 244/475 (51%), Gaps = 8/475 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  +LK+C     + LGK++H+ L ++ L  + V+ +SL+ +Y+KC    +A  +
Sbjct: 104 PDSYTYPSVLKACGGLYKYVLGKMIHTCLVKTGLMMDIVVGSSLVGMYAKCNAFEKAIWL 163

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K D+  W+++IS Y   G   +A+  F  M   GF PN    +  I +C+   +
Sbjct: 164 FNEMPEK-DVACWNTVISCYYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+  L+  G+   D  +  AL+DM+ K    LE A +VF++M +K  V W  MI
Sbjct: 223 LNRGMEIHEELINSGFL-LDSFISSALVDMYGKCG-HLEMAIEVFEQMPKKTVVAWNSMI 280

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +     G     I+LF  M   G  P   TLS ++  CS       GK +H + IR  + 
Sbjct: 281 SGYGLKGDSISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ 340

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            DV +  SL+D+Y KC   G V+ +  +F  +    V+SW  +I+GYV + G+  EA+ L
Sbjct: 341 SDVFINSSLMDLYFKC---GKVELAENIFKLIPKSKVVSWNVMISGYV-AEGKLFEALGL 396

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           FS+M +  V P+  TF SVL AC  L      E+++   +++    ++ V  +L+ MYA+
Sbjct: 397 FSEMRKSYVEPDAITFTSVLTACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAK 456

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +++A   F+ L +++LVS+ +M+ AY  +  +  A EL  E+  + +     TF ++
Sbjct: 457 CGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGQAYVALELFAEMLQSNMKPDRVTFLAI 516

Query: 496 LSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           LS     G + +G     +++   G       Y+ LI +  R   +  A+++ ++
Sbjct: 517 LSACGHAGLVDEGCYYFNQMVNVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 211/401 (52%), Gaps = 18/401 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G  ++A+    LM + G  P+  T +  + SC R  + + G  +H  L  S    +
Sbjct: 182 YYQSGNFKEALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S I ++L+ +Y KCG L  A ++F+ M  K+ +V+W+SMIS Y  +G  +  I +F  M 
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEVFEQMP-KKTVVAWNSMISGYGLKGDSISCIQLFKRMY 300

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
             G  P     S++I  CS +  +  G  ++G+ ++     SDV +  +L+D++ K G V
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR-NRIQSDVFINSSLMDLYFKCGKV 359

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L  A  +F  + +   V W +MI+     G   +A+ LF +M  S   PD  T + V++
Sbjct: 360 EL--AENIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVEPDAITFTSVLT 417

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS+L     G+++H+  I   L  +  V  +L+DMYAKC   G+VD++  VF  +   +
Sbjct: 418 ACSQLAALEKGEEIHNLIIEKKLDNNEVVMGALLDMYAKC---GAVDEAFSVFKCLPKRD 474

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSN---V 406
           ++SWT++IT Y  S G+   A++LF++M+Q  + P+  TF ++L ACG+  L+D      
Sbjct: 475 LVSWTSMITAY-GSHGQAYVALELFAEMLQSNMKPDRVTFLAILSACGHAGLVDEGCYYF 533

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            + V  + +        C    LI +  R+GR+ +A +  +
Sbjct: 534 NQMVNVYGIIPRVEHYSC----LIDLLGRAGRLHEAYEILQ 570


>gi|302786698|ref|XP_002975120.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
 gi|300157279|gb|EFJ23905.1| hypothetical protein SELMODRAFT_102603 [Selaginella moellendorffii]
          Length = 485

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 206/480 (42%), Positives = 312/480 (65%), Gaps = 2/480 (0%)

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
           V  N  T+ +VL             +V++     G  +D  VG +L++MY +   +E+AR
Sbjct: 6   VERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQSVEEAR 65

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT--GVGTSAYTFASLLSGASS 501
            AFE +   N+VS++ M+ AYA+N ++  A EL  E+     G+  +  TF +LL   S 
Sbjct: 66  AAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDACSF 125

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +GA+ +G +IHA + + GF+++  + NAL++ Y RC ++  A  VF  M  R+VISW+SM
Sbjct: 126 LGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRRRDVISWSSM 185

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           I+ FA+ G    A+E++++ML++G  P+ I +I+VL ACS++G++      FRS+  +  
Sbjct: 186 ISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDFFRSIVGDTQ 245

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           +   +EHYACMVD+LGR+G L +A + +R MP     L++ T L AC+++ D E G+ AA
Sbjct: 246 VEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTMLSACKLYTDVERGEAAA 305

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           E++ E DP++ + +I L+N+Y++A   +  A IRK M+ER + K+ GCSWIE  ++VH+F
Sbjct: 306 EVVFELDPENSSPYITLANIYSAAKRPKDAARIRKLMEERGIKKKPGCSWIEVLDRVHEF 365

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
             G+  HP+  EIYAE+ +L  ++KE GY  DT  VL ++EE++K   L+ HSEK+A+AF
Sbjct: 366 IAGDKMHPQRDEIYAEIQRLGRQMKEAGYFQDTKVVLQDVEEDEKENLLWYHSEKLAIAF 425

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GLIST    P+R+ KNLRVC DCH A K IS VTGREI++RD+NRFHH  DG CSCNDYW
Sbjct: 426 GLISTPPGAPLRIVKNLRVCSDCHAATKVISKVTGREILVRDTNRFHHFLDGMCSCNDYW 485



 Score =  122 bits (307), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/280 (27%), Positives = 144/280 (51%), Gaps = 7/280 (2%)

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M + G   ++ T   V+S  +       G+++HS     GL +DV VG +LV+MY KC  
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQ- 59

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ--VAPNHFTF 391
             SV+++R  F+++   NV+SW+A++  Y Q+ G  + A++L+ +M   +  +APN  TF
Sbjct: 60  --SVEEARAAFEKISRPNVVSWSAMLAAYAQN-GHARMALELYREMGSARKGMAPNRVTF 116

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            ++L AC  L       +++    +RG   D  V N+L++ Y R G + DA+  F+ +  
Sbjct: 117 ITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGMRR 176

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI-GKGEQ 510
           ++++S+++M+ A+A+    ++A EL H +   G       F S+L   S+ G +   G+ 
Sbjct: 177 RDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACSNSGVVEASGDF 236

Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
             + +  +  E     Y  ++ +  R   +  A  + + M
Sbjct: 237 FRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLM 276



 Score =  119 bits (298), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 162/343 (47%), Gaps = 36/343 (10%)

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G   N+  +  V+   +   ++  G  ++  +   G  + DV VG AL++M+ K    +E
Sbjct: 5   GVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAG-LEVDVIVGTALVNMYGKCQ-SVE 62

Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM--ILSGFLPDRFTLSGVVSA 292
            A   F+K++  N V W+ M+    Q G  R A+ L+ +M     G  P+R T   ++ A
Sbjct: 63  EARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLLDA 122

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           CS L     G+++H+     G   D+ V  +LV+ Y +C   GS+ D++ VFD M   +V
Sbjct: 123 CSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRC---GSLGDAKIVFDGMRRRDV 179

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SW+++I+ + Q  GR  EA++L+  M+     P+   F SVL AC N   S V E    
Sbjct: 180 ISWSSMISAFAQR-GRVDEAMELYHRMLSEGTLPDDIIFISVLFACSN---SGVVEA--- 232

Query: 413 HAVKRGRALDDCVGNS-----------LISMYARSGRMEDARKAFESL-FEKNLVSYNTM 460
                G      VG++           ++ +  R+G++ DA      + F    + Y TM
Sbjct: 233 ----SGDFFRSIVGDTQVEPTLEHYACMVDVLGRAGKLRDAEDLLRLMPFHPGPLLYMTM 288

Query: 461 VDA---YAKNLNSEKAFELLHEIEDTGVGTSAY-TFASLLSGA 499
           + A   Y      E A E++ E++     +S Y T A++ S A
Sbjct: 289 LSACKLYTDVERGEAAAEVVFELDPE--NSSPYITLANIYSAA 329



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/279 (27%), Positives = 136/279 (48%), Gaps = 27/279 (9%)

Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
           +E  GV  +  T+ ++LSG ++ G++ +G ++H+R+  +G E +  +  AL++MY +C +
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA--DGIKPNGITYIAVL 597
           VE A   F+++   NV+SW++M+  +A++G A  ALE++ +M +   G+ PN +T+I +L
Sbjct: 61  VEEARAAFEKISRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITLL 120

Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
            ACS  G ++EG K   +   E G    +     +V+  GR GSL +A      M    D
Sbjct: 121 DACSFLGALAEGRK-IHAAVAERGFDTDLVVCNALVNFYGRCGSLGDAKIVFDGM-RRRD 178

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKR 717
           V+ W + + A    G  +        +L +    P   I +S L+A              
Sbjct: 179 VISWSSMISAFAQRGRVDEAMELYHRMLSEGTL-PDDIIFISVLFAC------------- 224

Query: 718 MKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
                    +    +EA     +  VG+T    TLE YA
Sbjct: 225 ---------SNSGVVEASGDFFRSIVGDTQVEPTLEHYA 254



 Score =  105 bits (263), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 69/229 (30%), Positives = 119/229 (51%), Gaps = 7/229 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M  +G   +  TY  +L       +   G+ VHS +  + LE + ++  +L+++Y KC  
Sbjct: 1   MEIRGVERNKVTYVTVLSGFTTPGSLEEGRRVHSRVAGAGLEVDVIVGTALVNMYGKCQS 60

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM--LELGFCPNEYCFSAV 186
           + EA   F+ + ++ ++VSWS+M+++Y   G    A+ ++ EM     G  PN   F  +
Sbjct: 61  VEEARAAFEKI-SRPNVVSWSAMLAAYAQNGHARMALELYREMGSARKGMAPNRVTFITL 119

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTE 245
           + ACS    +A G  I+  + + G FD+D+ V  AL++ + + GS  L  A  VFD M  
Sbjct: 120 LDACSFLGALAEGRKIHAAVAERG-FDTDLVVCNALVNFYGRCGS--LGDAKIVFDGMRR 176

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
           ++ + W+ MI+   Q G   +A+ L+  M+  G LPD      V+ ACS
Sbjct: 177 RDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFACS 225



 Score = 88.2 bits (217), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 1/124 (0%)

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
            +KG  P+  T+  LL +C        G+ +H+ +     + + V+ N+L++ Y +CG L
Sbjct: 105 ARKGMAPNRVTFITLLDACSFLGALAEGRKIHAAVAERGFDTDLVVCNALVNFYGRCGSL 164

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
            +A  +F  M  +RD++SWSSMIS++  RG+  +A+ ++  ML  G  P++  F +V+ A
Sbjct: 165 GDAKIVFDGM-RRRDVISWSSMISAFAQRGRVDEAMELYHRMLSEGTLPDDIIFISVLFA 223

Query: 190 CSNT 193
           CSN+
Sbjct: 224 CSNS 227


>gi|225461979|ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 227/592 (38%), Positives = 344/592 (58%), Gaps = 37/592 (6%)

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN--VMSWTAIIT 360
           +Q+H+  I+T   L +     L  +   C    S   ++++F  +         W + + 
Sbjct: 45  RQVHAQIIKTNAPLSIL---PLTRVGLVCAFTPSFHYAQQIFKCVEKQKPETFVWNSCLK 101

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
              + G    +A+ LF  + Q  V P+ FT +SVL+AC NLLD +    ++    K G  
Sbjct: 102 ALAE-GDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFR 160

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH-- 478
            +  + N ++ +YA  G M +AR  FE + ++++V++N M+    K  + E A++L    
Sbjct: 161 SNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRM 220

Query: 479 -----------------------------EIEDTGVGTSAYTFASLLSGASSIGAIGKGE 509
                                        ++E+ GV  +  T  ++L+  + +GA+  G 
Sbjct: 221 PERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGM 280

Query: 510 QIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
           +IH    + GF+ N  I N LI MY +C  +E A +VF+EME+R V+SW++MI G A HG
Sbjct: 281 RIHEYSNRHGFKRNVRISNTLIDMYVKCGCLEEACKVFEEMEERTVVSWSAMIGGLAMHG 340

Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
            A  AL +F  M   GI+PNG+T+I +L ACSH GLISEG + F SM  ++GI+ ++EHY
Sbjct: 341 RAEEALRLFSDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHY 400

Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
            CMVDLL R+G L EA EFI +MP+  + +VW   LGACRVH + E+ + A + +LE DP
Sbjct: 401 GCMVDLLSRAGLLHEAHEFILNMPMKPNGVVWGALLGACRVHKNVEMAEEAIKHLLELDP 460

Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
            +   +++LSN+YA AG WE  A +RK MK+R + K  G S I  D  VH+F  GE SHP
Sbjct: 461 LNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHP 520

Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKS 809
            T +I+   ++L  +++  GY+P+T+ VL ++EE +KV+++ +HSEK+A+ FGL++T   
Sbjct: 521 DTEQIFQRWEELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAE 580

Query: 810 KPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            PIR+ KNLR+C DCH+A K IS +  REIV+RD NRFH   D  CSC DYW
Sbjct: 581 TPIRIMKNLRICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 217/517 (41%), Gaps = 110/517 (21%)

Query: 132 ANKIFKSM-GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
           A +IFK +   K +   W+S + +       +DAI +F  + +   CP+ +  S+V+RAC
Sbjct: 79  AQQIFKCVEKQKPETFVWNSCLKALAEGDSPIDAIMLFYRLRQYDVCPDTFTCSSVLRAC 138

Query: 191 SNTENVAIGHIIYGFLLKCGYFDS------------------------------DVCVGC 220
            N  +++ G I++G + K G+  +                              DV    
Sbjct: 139 LNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVHLYASCGEMGEARLLFEKMPQRDVVTWN 198

Query: 221 ALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
            +I   +K   D E AY +F +M E+N   WT MI    Q G  ++AI LF  M  +G  
Sbjct: 199 IMIAQLIKQG-DHEGAYDLFSRMPERNVRSWTSMIAGYVQCGKAKEAIHLFAKMEEAGVK 257

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
            +  T+  V++AC++L     G ++H ++ R G   +V +  +L+DMY KC   G ++++
Sbjct: 258 CNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRISNTLIDMYVKC---GCLEEA 314

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
            KVF+ M +  V+SW+A+I G     GR +EA++LFSDM Q  + PN  TF  +L AC +
Sbjct: 315 CKVFEEMEERTVVSWSAMIGGLAMH-GRAEEALRLFSDMSQVGIEPNGVTFIGLLHACSH 373

Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE-----KNLV 455
           +                                   G + + R+ F S+         + 
Sbjct: 374 M-----------------------------------GLISEGRRFFASMTRDYGIIPQIE 398

Query: 456 SYNTMVDAYAKNLNSEKAFELLHE----IEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
            Y  MVD  ++         LLHE    I +  +  +   + +LL        + K  ++
Sbjct: 399 HYGCMVDLLSRA-------GLLHEAHEFILNMPMKPNGVVWGALLGACR----VHKNVEM 447

Query: 512 HARIIKSGFE---SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV---ISWTSMITGF 565
               IK   E    N   Y  L ++Y+     E   +V K M+DR V     W+S+    
Sbjct: 448 AEEAIKHLLELDPLNDGYYVVLSNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDG 507

Query: 566 AKHGFAA-------------RALEIFYKMLADGIKPN 589
             H F A             R  E+  +M   G  PN
Sbjct: 508 VVHEFVAGEESHPDTEQIFQRWEELLEEMRLKGYVPN 544



 Score =  136 bits (343), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 109/414 (26%), Positives = 183/414 (44%), Gaps = 70/414 (16%)

Query: 62  AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
           AI     + Q    PD  T S +L++C+   +   G+++H ++ +     N  + N ++ 
Sbjct: 112 AIMLFYRLRQYDVCPDTFTCSSVLRACLNLLDLSNGRILHGVVEKVGFRSNLYLQNMIVH 171

Query: 122 LYSKCGDLNEANKIFKSMGNK------------------------------RDIVSWSSM 151
           LY+ CG++ EA  +F+ M  +                              R++ SW+SM
Sbjct: 172 LYASCGEMGEARLLFEKMPQRDVVTWNIMIAQLIKQGDHEGAYDLFSRMPERNVRSWTSM 231

Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
           I+ YV  GK  +AIH+F +M E G   NE    AV+ AC++   + +G  I+ +  + G 
Sbjct: 232 IAGYVQCGKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHG- 290

Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF 271
           F  +V +   LIDM+VK    LE A KVF++M E+  V W+ MI      G   +A+RLF
Sbjct: 291 FKRNVRISNTLIDMYVKCGC-LEEACKVFEEMEERTVVSWSAMIGGLAMHGRAEEALRLF 349

Query: 272 LDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC 331
            DM   G  P+  T  G++ ACS + L + G++                       +A  
Sbjct: 350 SDMSQVGIEPNGVTFIGLLHACSHMGLISEGRRF----------------------FASM 387

Query: 332 TVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
           T D  +    + +  M+D             +   G   EA +   +M    + PN   +
Sbjct: 388 TRDYGIIPQIEHYGCMVD------------LLSRAGLLHEAHEFILNM---PMKPNGVVW 432

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            ++L AC    +  +AE+   H ++    L+D     L ++YA +GR ED  + 
Sbjct: 433 GALLGACRVHKNVEMAEEAIKHLLELD-PLNDGYYVVLSNIYAEAGRWEDTARV 485



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/203 (27%), Positives = 97/203 (47%), Gaps = 3/203 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G+ ++AI     M + G   +  T   +L +C       LG  +H    R   + N  I 
Sbjct: 239 GKAKEAIHLFAKMEEAGVKCNEVTVVAVLAACADLGALDLGMRIHEYSNRHGFKRNVRIS 298

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+LI +Y KCG L EA K+F+ M  +R +VSWS+MI      G+  +A+ +F +M ++G 
Sbjct: 299 NTLIDMYVKCGCLEEACKVFEEM-EERTVVSWSAMIGGLAMHGRAEEALRLFSDMSQVGI 357

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSVDLES 235
            PN   F  ++ ACS+   ++ G   +  + +  G        GC ++D+  +  +  E+
Sbjct: 358 EPNGVTFIGLLHACSHMGLISEGRRFFASMTRDYGIIPQIEHYGC-MVDLLSRAGLLHEA 416

Query: 236 AYKVFDKMTEKNTVGWTLMITRC 258
              + +   + N V W  ++  C
Sbjct: 417 HEFILNMPMKPNGVVWGALLGAC 439


>gi|334186267|ref|NP_192012.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635642|sp|Q9SV26.2|PP297_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g01030, mitochondrial; Flags: Precursor
 gi|332656570|gb|AEE81970.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 768

 Score =  428 bits (1101), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 250/806 (31%), Positives = 418/806 (51%), Gaps = 82/806 (10%)

Query: 96  LGKLVHSLLTRSKLE-PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           LG  +H  L +  L+  ++ ++++ +  Y +C  L  ANK+F  M  KRD ++W+ ++  
Sbjct: 5   LGLTIHGGLIKRGLDNSDTRVVSASMGFYGRCVSLGFANKLFDEM-PKRDDLAWNEIVMV 63

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
            +  G    A+ +F EM   G    +     +++ CSN E  A G  I+G++L+ G  +S
Sbjct: 64  NLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGFAEGRQIHGYVLRLG-LES 122

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           +V +  +LI M+ +    LE + KVF+ M ++N   W  +++  T+LG   DAI L  +M
Sbjct: 123 NVSMCNSLIVMYSRNG-KLELSRKVFNSMKDRNLSSWNSILSSYTKLGYVDDAIGLLDEM 181

Query: 275 ILSGFLPDRFT-----------------------------------LSGVVSACSELELF 299
            + G  PD  T                                   +S ++ A +E    
Sbjct: 182 EICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPSTSSISSLLQAVAEPGHL 241

Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
             GK +H + +R  L  DV V  +L+DMY K    G +  +R VFD M   N+++W +++
Sbjct: 242 KLGKAIHGYILRNQLWYDVYVETTLIDMYIKT---GYLPYARMVFDMMDAKNIVAWNSLV 298

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           +G                            ++A +LK          AE +     K G 
Sbjct: 299 SG---------------------------LSYACLLKD---------AEALMIRMEKEGI 322

Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEK----NLVSYNTMVDAYAKNLNSEKAFE 475
             D    NSL S YA  G+ E A      + EK    N+VS+  +    +KN N   A +
Sbjct: 323 KPDAITWNSLASGYATLGKPEKALDVIGKMKEKGVAPNVVSWTAIFSGCSKNGNFRNALK 382

Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
           +  ++++ GVG +A T ++LL     +  +  G+++H   ++     +  +  AL+ MY 
Sbjct: 383 VFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLICDAYVATALVDMYG 442

Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
           +  ++++A ++F  ++++++ SW  M+ G+A  G     +  F  ML  G++P+ IT+ +
Sbjct: 443 KSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVMLEAGMEPDAITFTS 502

Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           VLS C ++GL+ EGWK+F  M   +GI+  +EH +CMVDLLGRSG L EA +FI++M L 
Sbjct: 503 VLSVCKNSGLVQEGWKYFDLMRSRYGIIPTIEHCSCMVDLLGRSGYLDEAWDFIQTMSLK 562

Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
            D  +W  FL +C++H D EL + A + +   +P + A ++++ NLY++   WE V  IR
Sbjct: 563 PDATIWGAFLSSCKIHRDLELAEIAWKRLQVLEPHNSANYMMMINLYSNLNRWEDVERIR 622

Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
             M+   +  +   SWI+ D  VH F+    +HP   +IY EL +L  ++K+ GY+PDT+
Sbjct: 623 NLMRNNRVRVQDLWSWIQIDQTVHIFYAEGKTHPDEGDIYFELYKLVSEMKKSGYVPDTS 682

Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
            +  ++ + +K + L  H+EK+A+ +GLI      PIRV KN  +C D HT  KY+S++ 
Sbjct: 683 CIHQDISDSEKEKLLMGHTEKLAMTYGLIKKKGLAPIRVVKNTNICSDSHTVAKYMSVLR 742

Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
            REIVL++  R HH +DGKCSCND W
Sbjct: 743 NREIVLQEGARVHHFRDGKCSCNDSW 768



 Score =  161 bits (407), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 144/554 (25%), Positives = 244/554 (44%), Gaps = 79/554 (14%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P   +   N ++  +L  G  +KA+     M   G      T   LL+ C     F
Sbjct: 46  FDEMPKRDDLAWNEIVMVNLRSGNWEKAVELFREMQFSGAKAYDSTMVKLLQVCSNKEGF 105

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM--------------- 139
             G+ +H  + R  LE N  + NSLI +YS+ G L  + K+F SM               
Sbjct: 106 AEGRQIHGYVLRLGLESNVSMCNSLIVMYSRNGKLELSRKVFNSMKDRNLSSWNSILSSY 165

Query: 140 -------------------GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
                              G K DIV+W+S++S Y ++G   DAI +   M   G  P+ 
Sbjct: 166 TKLGYVDDAIGLLDEMEICGLKPDIVTWNSLLSGYASKGLSKDAIAVLKRMQIAGLKPST 225

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
              S++++A +   ++ +G  I+G++L+   +  DV V   LIDM++K    L  A  VF
Sbjct: 226 SSISSLLQAVAEPGHLKLGKAIHGYILRNQLW-YDVYVETTLIDMYIKTGY-LPYARMVF 283

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D M  KN V W  +++  +     +DA  L + M   G  PD  T + + S  + L    
Sbjct: 284 DMMDAKNIVAWNSLVSGLSYACLLKDAEALMIRMEKEGIKPDAITWNSLASGYATL---- 339

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            GK           ALDV +G                    K+ ++ +  NV+SWTAI +
Sbjct: 340 -GKPEK--------ALDV-IG--------------------KMKEKGVAPNVVSWTAIFS 369

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           G     G  + A+K+F  M +  V PN  T +++LK  G L   +  ++V+   +++   
Sbjct: 370 G-CSKNGNFRNALKVFIKMQEEGVGPNAATMSTLLKILGCLSLLHSGKEVHGFCLRKNLI 428

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            D  V  +L+ MY +SG ++ A + F  +  K+L S+N M+  YA     E+       +
Sbjct: 429 CDAYVATALVDMYGKSGDLQSAIEIFWGIKNKSLASWNCMLMGYAMFGRGEEGIAAFSVM 488

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF----ESNHCIYNALISMYSR 536
            + G+   A TF S+LS   + G + +G + +  +++S +       HC  + ++ +  R
Sbjct: 489 LEAGMEPDAITFTSVLSVCKNSGLVQEGWK-YFDLMRSRYGIIPTIEHC--SCMVDLLGR 545

Query: 537 CANVEAAFQVFKEM 550
              ++ A+   + M
Sbjct: 546 SGYLDEAWDFIQTM 559


>gi|297744892|emb|CBI38389.3| unnamed protein product [Vitis vinifera]
          Length = 614

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 214/561 (38%), Positives = 353/561 (62%), Gaps = 8/561 (1%)

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H+  IR G + D  +   L+   +KC    ++D + ++F    + NV  +TA+I G+V 
Sbjct: 58  IHAQLIRNGHSQDPFMVFELLRSCSKCH---AIDYASRIFQYTHNPNVYLYTALIDGFVS 114

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
           SG    EA++L+S M+   + P+++  AS+LKACG+ L      +V++ A+K G + +  
Sbjct: 115 SGNY-LEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNRL 173

Query: 425 VGNSLISMYARSGRMEDARKAFESLFE----KNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
           V   ++ +Y + G + DAR+ FE + E    K+ V +  M+D + +N  + +A E    +
Sbjct: 174 VRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRGM 233

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           +   V  + +T   +LS  S +GA+  G  +H+ + K   E N  + NALI+MYSRC ++
Sbjct: 234 QGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALINMYSRCGSI 293

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
           + A  VF EM+DR+VI++ +MI+G + +G + +A+E+F  M+   ++P  +T++ VL+AC
Sbjct: 294 DEAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGVLNAC 353

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           SH GL+  G++ F SM  ++ +  ++EHY CMVDLLGR G L EA + IR+M ++ D ++
Sbjct: 354 SHGGLVDFGFEIFHSMARDYRVEPQIEHYGCMVDLLGRVGRLEEAYDLIRTMKMTPDHIM 413

Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
             T L AC++H + ELG+  A+ + ++   D   ++LLS++YAS+G W+  A +R +MKE
Sbjct: 414 LGTLLSACKMHKNLELGEQVAKELEDRGQADSGTYVLLSHVYASSGKWKEAAQVRAKMKE 473

Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
             + KE GCS IE +N++H+F +G+  HP+   IY +L++L   ++  GY P+   VL +
Sbjct: 474 AGMQKEPGCSSIEVNNEIHEFLLGDLRHPQKERIYEKLEELNRLLRLEGYHPEKEVVLQD 533

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +E+ +K   L  HSE++A+ +GLIST     IRV KNLRVC DCH+AIK I+ +T R+IV
Sbjct: 534 IEDGEKEWALAMHSERLAICYGLISTEPCTMIRVMKNLRVCYDCHSAIKLIAKITRRKIV 593

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD NRFH+ ++G CSC DYW
Sbjct: 594 VRDRNRFHYFENGACSCGDYW 614



 Score =  169 bits (428), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 117/441 (26%), Positives = 236/441 (53%), Gaps = 20/441 (4%)

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWS 149
           RSR+ +    +H+ L R+    +  ++  L+   SKC  ++ A++IF+   N  ++  ++
Sbjct: 48  RSRHINQVLPIHAQLIRNGHSQDPFMVFELLRSCSKCHAIDYASRIFQYTHNP-NVYLYT 106

Query: 150 SMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           ++I  +V+ G  ++AI ++  ML     P+ Y  +++++AC +   +  G  ++   LK 
Sbjct: 107 ALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKL 166

Query: 210 GYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE----KNTVGWTLMITRCTQLGCPR 265
           G F S+  V   +++++ K   +L  A +VF++M E    K+TV WT MI    +     
Sbjct: 167 G-FSSNRLVRLRIMELYGKCG-ELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETN 224

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
            A+  F  M      P+ FT+  V+SACS+L     G+ +HS+  +  + L++ VG +L+
Sbjct: 225 RALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFEIELNLFVGNALI 284

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           +MY++C   GS+D+++ VFD M D +V+++  +I+G +   G+ ++A++LF  M+  ++ 
Sbjct: 285 NMYSRC---GSIDEAQTVFDEMKDRDVITYNTMISG-LSMNGKSRQAIELFRVMVGRRLR 340

Query: 386 PNHFTFASVLKAC--GNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMED 441
           P + TF  VL AC  G L+D     +++ H++ R   ++  + +   ++ +  R GR+E+
Sbjct: 341 PTNVTFVGVLNACSHGGLVDFGF--EIF-HSMARDYRVEPQIEHYGCMVDLLGRVGRLEE 397

Query: 442 ARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           A     ++    + +   T++ A   + N E   ++  E+ED G   S  T+  L    +
Sbjct: 398 AYDLIRTMKMTPDHIMLGTLLSACKMHKNLELGEQVAKELEDRGQADSG-TYVLLSHVYA 456

Query: 501 SIGAIGKGEQIHARIIKSGFE 521
           S G   +  Q+ A++ ++G +
Sbjct: 457 SSGKWKEAAQVRAKMKEAGMQ 477



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/326 (26%), Positives = 168/326 (51%), Gaps = 13/326 (3%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A ++F      N   +T +I      G   +AI+L+  M+    LPD + ++ ++ A
Sbjct: 87  IDYASRIFQYTHNPNVYLYTALIDGFVSSGNYLEAIQLYSRMLHESILPDNYLMASILKA 146

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD--- 349
           C        G+++HS A++ G + +  V   ++++Y KC   G + D+R+VF+ M +   
Sbjct: 147 CGSQLALREGREVHSRALKLGFSSNRLVRLRIMELYGKC---GELGDARRVFEEMPEDVV 203

Query: 350 -HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             + + WTA+I G+V++   ++ A++ F  M    V PN FT   VL AC  L    +  
Sbjct: 204 AKDTVCWTAMIDGFVRNEETNR-ALEAFRGMQGENVRPNEFTIVCVLSACSQLGALEIGR 262

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
            V+++  K    L+  VGN+LI+MY+R G +++A+  F+ + ++++++YNTM+   + N 
Sbjct: 263 WVHSYMRKFEIELNLFVGNALINMYSRCGSIDEAQTVFDEMKDRDVITYNTMISGLSMNG 322

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH---ARIIKSGFESNHC 525
            S +A EL   +    +  +  TF  +L+  S  G +  G +I    AR  +   +  H 
Sbjct: 323 KSRQAIELFRVMVGRRLRPTNVTFVGVLNACSHGGLVDFGFEIFHSMARDYRVEPQIEH- 381

Query: 526 IYNALISMYSRCANVEAAFQVFKEME 551
            Y  ++ +  R   +E A+ + + M+
Sbjct: 382 -YGCMVDLLGRVGRLEEAYDLIRTMK 406



 Score =  121 bits (303), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 179/405 (44%), Gaps = 45/405 (11%)

Query: 54  LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
           ++ G   +AI     M  +   PD    + +LK+C        G+ VHS   +     N 
Sbjct: 113 VSSGNYLEAIQLYSRMLHESILPDNYLMASILKACGSQLALREGREVHSRALKLGFSSNR 172

Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNK---RDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           ++   ++ LY KCG+L +A ++F+ M      +D V W++MI  +V   +   A+  F  
Sbjct: 173 LVRLRIMELYGKCGELGDARRVFEEMPEDVVAKDTVCWTAMIDGFVRNEETNRALEAFRG 232

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
           M      PNE+    V+ ACS    + IG  ++ ++ K    + ++ VG ALI+M+ + G
Sbjct: 233 MQGENVRPNEFTIVCVLSACSQLGALEIGRWVHSYMRKFE-IELNLFVGNALINMYSRCG 291

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
           S+D   A  VFD+M +++ + +  MI+  +  G  R AI LF  M+     P   T  GV
Sbjct: 292 SID--EAQTVFDEMKDRDVITYNTMISGLSMNGKSRQAIELFRVMVGRRLRPTNVTFVGV 349

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           ++ACS   L   G     + I   +A D  V    ++ Y  C VD               
Sbjct: 350 LNACSHGGLVDFG-----FEIFHSMARDYRVE-PQIEHYG-CMVD--------------- 387

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
                    + G V   GR +EA  L   M   ++ P+H    ++L AC    +  + EQ
Sbjct: 388 ---------LLGRV---GRLEEAYDLIRTM---KMTPDHIMLGTLLSACKMHKNLELGEQ 432

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
           V      RG+A D      L  +YA SG+ ++A +    + E  +
Sbjct: 433 VAKELEDRGQA-DSGTYVLLSHVYASSGKWKEAAQVRAKMKEAGM 476


>gi|449521571|ref|XP_004167803.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 817

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 253/763 (33%), Positives = 428/763 (56%), Gaps = 36/763 (4%)

Query: 36  FIAQPTTSEPLSNRLIYHL--NDGRVQKAIFTLDLMTQKGNHP----DLDTYSLLLKSCI 89
           F A P  S  L N +I  L  N+   +  +F  ++   K + P    D  TYS +LK+C 
Sbjct: 51  FDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM---KSSSPQVKCDSYTYSSVLKACA 107

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE-------------ANKIF 136
            +RN  +GK VH+   R  + P+ ++ NSL+++YS C                    K+F
Sbjct: 108 DTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVF 167

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
            +M  KR +V+W+++I+ YV   +  +A+  F  M+++G  P+   F  V  A S+  + 
Sbjct: 168 DTM-RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDF 226

Query: 197 AIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
              ++++G L+K G  + +D+ V  + I M+ +    LE A KVFD   E+NT  W  MI
Sbjct: 227 KNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGC-LEFAKKVFDNCLERNTEVWNTMI 285

Query: 256 TRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +   Q     + I+LF   + S     D  TL   +SA S L+ F   +QLH++ I+   
Sbjct: 286 SAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVA 345

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
              VCV  +L+ MY++C    S+D S K+FD M + +V+SW  +I+ +VQ+G  D EA+ 
Sbjct: 346 VTQVCVMNALIAMYSRCN---SIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLND-EALM 401

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +M +  +  +  T  ++L A  +L + ++ +Q + + ++ G   +  + + LI MYA
Sbjct: 402 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYA 460

Query: 435 RSGRMEDARKAFESLF--EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           +SG +E A+  FE  F  E++  ++N+M+  Y +N   ++AF +L ++ D  V  +  T 
Sbjct: 461 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 520

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           AS+L   +  G I  G+Q+H   I++  + N  +  ALI MYS+  ++  A  VF +  +
Sbjct: 521 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANE 580

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           ++++++++MI G+ +HG    AL +F++M   GI+P+ +T +AVLSACS+AGL+ EG + 
Sbjct: 581 KSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 640

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL-VWRTFLGACRVH 671
           F SM   + I    EH+ C+ D+LGR+G + +A EF+  +    +V+ +W + L ACR+H
Sbjct: 641 FESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIH 700

Query: 672 GDTELGKHAAEMILEQDPQD--PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
              ELGK  A+ +LE +  +     H+LLSN+YA   +WE V  +RK+M+ER L KE G 
Sbjct: 701 KQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGS 760

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           SWIE    ++ F   +  HP++ +IY+ L++L +++K  GY P
Sbjct: 761 SWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRP 803



 Score =  202 bits (513), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 262/544 (48%), Gaps = 55/544 (10%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP----DRFTLSG 288
           L  A ++FD +   +TV W  +I        P +A+  + +M  S   P    D +T S 
Sbjct: 44  LHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSS--PQVKCDSYTYSS 101

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC---TVDGSV-------D 338
           V+ AC++      GK +H+  +R  +     V  SL++MY+ C   T DG +       D
Sbjct: 102 VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 161

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             RKVFD M    V++W  +I  YV++  R  EAVK FS M++  + P+  +F +V  A 
Sbjct: 162 LVRKVFDTMRKRTVVAWNTLIAWYVRT-ERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAF 220

Query: 399 GNLLDSNVAEQVYTHAVKRGRAL--DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
            +L D   A  V+   VK G     D  V +S I MYA  G +E A+K F++  E+N   
Sbjct: 221 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 280

Query: 457 YNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           +NTM+ A+ +N  S +  +L  + +E         T  S +S AS +      EQ+HA +
Sbjct: 281 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 340

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           IK+   +  C+ NALI+MYSRC +++ +F++F  M +++V+SW +MI+ F ++G    AL
Sbjct: 341 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 400

Query: 576 EIFYKMLADGIKPNGITYIAVLSACS-----------HAGLISEGWK------HFRSMYD 618
            +FY+M    +  + +T  A+LSA S           H  L+  G +      +   MY 
Sbjct: 401 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYA 460

Query: 619 EHGIVQRMEH--------------YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVW 661
           + G+++  ++              +  M+    ++G + +A   +R M    +  +V+  
Sbjct: 461 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 520

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
            + L AC   G  + GK      +  D  Q+      L ++Y+ +G   +  N+  +  E
Sbjct: 521 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANE 580

Query: 721 RNLI 724
           ++++
Sbjct: 581 KSIV 584



 Score =  115 bits (289), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 182/376 (48%), Gaps = 24/376 (6%)

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTF 391
           +G +  +R++FD +   + + W  II G V +   D EA+  +S+M     QV  + +T+
Sbjct: 41  EGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPD-EALLFYSNMKSSSPQVKCDSYTY 99

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR-----------SG--R 438
           +SVLKAC +  +  V + V+ H ++        V NSL++MY+            SG  R
Sbjct: 100 SSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSR 159

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
            +  RK F+++ ++ +V++NT++  Y +     +A +    +   G+  S  +F ++   
Sbjct: 160 CDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPA 219

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIY--NALISMYSRCANVEAAFQVFKEMEDRNVI 556
            SS+G       +H  ++K G E  + +Y  ++ I MY+    +E A +VF    +RN  
Sbjct: 220 FSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTE 279

Query: 557 SWTSMITGFAKHGFAARALEIFYKML-ADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
            W +MI+ F ++ F+   +++F++ + ++    + +T ++ +SA SH     E  +   +
Sbjct: 280 VWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKF-ELAEQLHA 338

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
              ++  V ++     ++ +  R  S+  + +   +MP   DV+ W T + A   +G   
Sbjct: 339 FVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSWNTMISAFVQNG--- 394

Query: 676 LGKHAAEMILEQDPQD 691
           L   A  +  E   QD
Sbjct: 395 LNDEALMLFYEMKKQD 410



 Score = 75.5 bits (184), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/190 (23%), Positives = 94/190 (49%), Gaps = 15/190 (7%)

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG--VGT 487
           +S   + G++  AR+ F++L   + V +NT++     N   ++A      ++ +   V  
Sbjct: 35  LSRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSSPQVKC 94

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV------- 540
            +YT++S+L   +    +  G+ +HA  ++     +  +YN+L++MYS C++        
Sbjct: 95  DSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMV 154

Query: 541 ------EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
                 +   +VF  M  R V++W ++I  + +    A A++ F  M+  GIKP+ ++++
Sbjct: 155 SGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFV 214

Query: 595 AVLSACSHAG 604
            V  A S  G
Sbjct: 215 NVFPAFSSLG 224


>gi|15237442|ref|NP_199458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170604|sp|Q9FHF9.1|PP419_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g46460, mitochondrial; Flags: Precursor
 gi|10177583|dbj|BAB10814.1| unnamed protein product [Arabidopsis thaliana]
 gi|332008005|gb|AED95388.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 697

 Score =  428 bits (1100), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 240/633 (37%), Positives = 361/633 (57%), Gaps = 21/633 (3%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS--GVV 290
           L  A  +FD+M  ++ V W  MI+ C + G    A++LF +M      P+R  +S   +V
Sbjct: 82  LVDALNLFDEMPVRDVVSWNSMISGCVECGDMNTAVKLFDEM------PERSVVSWTAMV 135

Query: 291 SACSELELFTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           + C     F SGK   +  +   + + D     S+V  Y +    G VDD+ K+F +M  
Sbjct: 136 NGC-----FRSGKVDQAERLFYQMPVKDTAAWNSMVHGYLQF---GKVDDALKLFKQMPG 187

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            NV+SWT +I G  Q+  R  EA+ LF +M++  +      F  V+ AC N    ++  Q
Sbjct: 188 KNVISWTTMICGLDQNE-RSGEALDLFKNMLRCCIKSTSRPFTCVITACANAPAFHMGIQ 246

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
           V+   +K G   ++ V  SLI+ YA   R+ D+RK F+    + +  +  ++  Y+ N  
Sbjct: 247 VHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKVHEQVAVWTALLSGYSLNKK 306

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
            E A  +   +    +  +  TFAS L+  S++G +  G+++H   +K G E++  + N+
Sbjct: 307 HEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLETDAFVGNS 366

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           L+ MYS   NV  A  VF ++  ++++SW S+I G A+HG    A  IF +M+    +P+
Sbjct: 367 LVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHGRGKWAFVIFGQMIRLNKEPD 426

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDE-HGIVQRMEHYACMVDLLGRSGSLTEALEF 648
            IT+  +LSACSH G + +G K F  M    + I ++++HY CMVD+LGR G L EA E 
Sbjct: 427 EITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCGKLKEAEEL 486

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I  M +  + +VW   L ACR+H D + G+ AA  I   D +  AA++LLSN+YASAG W
Sbjct: 487 IERMVVKPNEMVWLALLSACRMHSDVDRGEKAAAAIFNLDSKSSAAYVLLSNIYASAGRW 546

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
             V+ +R +MK+  ++K+ G SW+    K H+F  G+   P    IY +L+ L  K+KE 
Sbjct: 547 SNVSKLRVKMKKNGIMKKPGSSWVVIRGKKHEFFSGD--QPHCSRIYEKLEFLREKLKEL 604

Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
           GY PD    LH++E+EQK + L+ HSE++A+AFGLI+T +   + V KNLRVC DCHT I
Sbjct: 605 GYAPDYRSALHDVEDEQKEEMLWYHSERLAIAFGLINTVEGSAVTVMKNLRVCEDCHTVI 664

Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           K IS V GREIVLRD  RFHH K+G CSC DYW
Sbjct: 665 KLISGVVGREIVLRDPIRFHHFKNGTCSCGDYW 697



 Score =  185 bits (469), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 144/510 (28%), Positives = 241/510 (47%), Gaps = 51/510 (10%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P+  +   +I+ Y++   L +A  +F  M   RD+VSW+SMIS  V  G    A+ +F E
Sbjct: 64  PHVSLYTKMITGYTRSNRLVDALNLFDEM-PVRDVVSWNSMISGCVECGDMNTAVKLFDE 122

Query: 171 MLELGFCPNEYCFSAVIRACSNTENV-AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK- 228
           M E         ++A++  C  +  V     + Y   +K      D     +++  +++ 
Sbjct: 123 MPERSVVS----WTAMVNGCFRSGKVDQAERLFYQMPVK------DTAAWNSMVHGYLQF 172

Query: 229 GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSG 288
           G VD   A K+F +M  KN + WT MI    Q     +A+ LF +M+           + 
Sbjct: 173 GKVD--DALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTSRPFTC 230

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           V++AC+    F  G Q+H   I+ G   +  V  SL+  YA C     + DSRKVFD  +
Sbjct: 231 VITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCK---RIGDSRKVFDEKV 287

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
              V  WTA+++GY     + ++A+ +FS M++  + PN  TFAS L +C  L   +  +
Sbjct: 288 HEQVAVWTALLSGY-SLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +++  AVK G   D  VGNSL+ MY+ SG + DA   F  +F+K++VS+N+++   A++ 
Sbjct: 347 EMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQHG 406

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
             + AF +  ++          TF  LLS  S  G + KG ++    + SG   NH    
Sbjct: 407 RGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFY-YMSSGI--NHI--- 460

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
                                  DR +  +T M+    + G    A E+  +M+   +KP
Sbjct: 461 -----------------------DRKIQHYTCMVDILGRCGKLKEAEELIERMV---VKP 494

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           N + ++A+LSAC     +  G K   ++++
Sbjct: 495 NEMVWLALLSACRMHSDVDRGEKAAAAIFN 524



 Score =  119 bits (299), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 103/413 (24%), Positives = 195/413 (47%), Gaps = 48/413 (11%)

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           +D++R+VF+++   +V  +T +ITGY +S  R  +A+ LF +M    V     ++ S++ 
Sbjct: 51  IDEAREVFNQVPSPHVSLYTKMITGYTRS-NRLVDALNLFDEMPVRDVV----SWNSMIS 105

Query: 397 ACGNLLDSNVAEQVYTHAVKR---------------GR------------ALDDCVGNSL 429
            C    D N A +++    +R               G+              D    NS+
Sbjct: 106 GCVECGDMNTAVKLFDEMPERSVVSWTAMVNGCFRSGKVDQAERLFYQMPVKDTAAWNSM 165

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           +  Y + G+++DA K F+ +  KN++S+ TM+    +N  S +A +L   +    + +++
Sbjct: 166 VHGYLQFGKVDDALKLFKQMPGKNVISWTTMICGLDQNERSGEALDLFKNMLRCCIKSTS 225

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
             F  +++  ++  A   G Q+H  IIK GF     +  +LI+ Y+ C  +  + +VF E
Sbjct: 226 RPFTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDE 285

Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
                V  WT++++G++ +     AL IF  ML + I PN  T+ + L++CS  G +  G
Sbjct: 286 KVHEQVAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWG 345

Query: 610 WKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE-FIRSMPLSADVLVWRTFLGAC 668
            K    +  + G+         +V +   SG++ +A+  FI+    S  ++ W + +  C
Sbjct: 346 -KEMHGVAVKLGLETDAFVGNSLVVMYSDSGNVNDAVSVFIKIFKKS--IVSWNSIIVGC 402

Query: 669 RVHGDTELGKHA----AEMI-LEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
             HG    GK A     +MI L ++P +    I  + L ++  H  ++   RK
Sbjct: 403 AQHGR---GKWAFVIFGQMIRLNKEPDE----ITFTGLLSACSHCGFLEKGRK 448



 Score =  113 bits (282), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 79/308 (25%), Positives = 153/308 (49%), Gaps = 20/308 (6%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           ++ ++ +C  +  FH+G  VH L+ +        +  SLI+ Y+ C  + ++ K+F    
Sbjct: 228 FTCVITACANAPAFHMGIQVHGLIIKLGFLYEEYVSASLITFYANCKRIGDSRKVFDEKV 287

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
           +++ +  W++++S Y    K  DA+ +F  ML     PN+  F++ + +CS    +  G 
Sbjct: 288 HEQ-VAVWTALLSGYSLNKKHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGK 346

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
            ++G  +K G  ++D  VG +L+ M+   S ++  A  VF K+ +K+ V W  +I  C Q
Sbjct: 347 EMHGVAVKLG-LETDAFVGNSLVVMY-SDSGNVNDAVSVFIKIFKKSIVSWNSIIVGCAQ 404

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G  + A  +F  MI     PD  T +G++SACS       G++L  +       +D  +
Sbjct: 405 HGRGKWAFVIFGQMIRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKI 464

Query: 321 G--CSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
                +VD+  +C   G + ++ ++ +RM +  N M W A+++           A ++ S
Sbjct: 465 QHYTCMVDILGRC---GKLKEAEELIERMVVKPNEMVWLALLS-----------ACRMHS 510

Query: 378 DMIQGQVA 385
           D+ +G+ A
Sbjct: 511 DVDRGEKA 518



 Score = 69.7 bits (169), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 104/209 (49%), Gaps = 5/209 (2%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN  + + A+     M +    P+  T++  L SC        GK +H +  +  LE 
Sbjct: 301 YSLNK-KHEDALSIFSGMLRNSILPNQSTFASGLNSCSALGTLDWGKEMHGVAVKLGLET 359

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           ++ + NSL+ +YS  G++N+A  +F  +  K+ IVSW+S+I      G+   A  +F +M
Sbjct: 360 DAFVGNSLVVMYSDSGNVNDAVSVFIKI-FKKSIVSWNSIIVGCAQHGRGKWAFVIFGQM 418

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGS 230
           + L   P+E  F+ ++ ACS+   +  G  ++ ++     + D  +     ++D+  +  
Sbjct: 419 IRLNKEPDEITFTGLLSACSHCGFLEKGRKLFYYMSSGINHIDRKIQHYTCMVDILGRCG 478

Query: 231 VDLESAYKVFDKMTEK-NTVGWTLMITRC 258
             L+ A ++ ++M  K N + W  +++ C
Sbjct: 479 -KLKEAEELIERMVVKPNEMVWLALLSAC 506


>gi|357124213|ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g11290-like [Brachypodium distachyon]
          Length = 637

 Score =  427 bits (1099), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 216/576 (37%), Positives = 339/576 (58%), Gaps = 5/576 (0%)

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
           + V+ +C       +G+QLH   + +GL  D  +   LVD+YA C   G V  +R++FD 
Sbjct: 66  TSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAAC---GLVGHARRLFDG 122

Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
           M   NV  W  +I  Y + G  +  A++L+  M+   V P++FT+   LKAC  LLD   
Sbjct: 123 MPKRNVFLWNVLIRAYARDGPHEV-AIQLYRGMVDYGVEPDNFTYPLALKACAALLDLET 181

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
             +V+   +      D  V   L+ MYA+ G ++DAR  F+ +  ++ V +N+M+ AY +
Sbjct: 182 GREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQ 241

Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
           N    +A  L  ++   GVG +  T  S +S A+   A+ +G ++H    + GF+    +
Sbjct: 242 NGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKL 301

Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG- 585
             +L+ MY++   V+ A  +F+++  R ++SW +MI G+  HG    AL++F KM  +  
Sbjct: 302 KTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQ 361

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           + P+ IT++ VLSAC+H G++ E  + F  M D + I   ++H+ C+VD+LG +G   EA
Sbjct: 362 VTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLGHAGRFEEA 421

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
            + I+ MP+  D  +W   L  C++H + ELG+ A + ++E +P+D   ++LLSN+YA +
Sbjct: 422 YDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVLLSNIYAQS 481

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G WE  A +RK M  R L K  GCSWIE   K H F VG+ SHP++ EIY EL++L   +
Sbjct: 482 GKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEELERLEGLM 541

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
            + GY+PDT  V H++ +++K   +  HSE++A+AFGLIST     + V KNLRVC DCH
Sbjct: 542 SDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKNLRVCEDCH 601

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             IK IS +  REI++RD NR+HH  +G+CSC DYW
Sbjct: 602 VVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637



 Score =  166 bits (419), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 106/320 (33%), Positives = 176/320 (55%), Gaps = 10/320 (3%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG 140
           Y+ +L+SC+ SR+   G+ +H  L  S L P++V+   L+ LY+ CG +  A ++F  M 
Sbjct: 65  YTSVLQSCVASRSLGTGRQLHGRLLVSGLGPDTVLATKLVDLYAACGLVGHARRLFDGM- 123

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGH 200
            KR++  W+ +I +Y   G    AI ++  M++ G  P+ + +   ++AC+   ++  G 
Sbjct: 124 PKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDLETGR 183

Query: 201 IIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
            ++  +L   ++  D+ V   L+DM+ K G VD   A  VFD++  +++V W  MI    
Sbjct: 184 EVHERVLGT-HWGEDMFVCAGLVDMYAKCGCVD--DARAVFDRIRVRDSVVWNSMIAAYG 240

Query: 260 QLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVC 319
           Q G P +A+ L  DM  +G  P   TL   +SA ++      G++LH +  R G      
Sbjct: 241 QNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDK 300

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +  SLVDMYAK    G V  +R +F++++   ++SW A+I GY   G  D EA+KLF+ M
Sbjct: 301 LKTSLVDMYAK---SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFD-EALKLFNKM 356

Query: 380 -IQGQVAPNHFTFASVLKAC 398
            ++ QV P++ TF  VL AC
Sbjct: 357 RVEAQVTPDNITFVGVLSAC 376



 Score =  150 bits (379), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 194/397 (48%), Gaps = 14/397 (3%)

Query: 178 PNEYC-FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
           PN Y  +++V+++C  + ++  G  ++G LL  G    D  +   L+D++    + +  A
Sbjct: 59  PNSYHHYTSVLQSCVASRSLGTGRQLHGRLLVSG-LGPDTVLATKLVDLYAACGL-VGHA 116

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
            ++FD M ++N   W ++I    + G    AI+L+  M+  G  PD FT    + AC+ L
Sbjct: 117 RRLFDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAAL 176

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
               +G+++H   + T    D+ V   LVDMYAKC   G VDD+R VFDR+   + + W 
Sbjct: 177 LDLETGREVHERVLGTHWGEDMFVCAGLVDMYAKC---GCVDDARAVFDRIRVRDSVVWN 233

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++I  Y Q+ GR  EA+ L  DM    V P   T  S + A  +        +++    +
Sbjct: 234 SMIAAYGQN-GRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWR 292

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
           RG    D +  SL+ MYA+SG ++ AR  FE L ++ LVS+N M+  Y  + + ++A +L
Sbjct: 293 RGFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKL 352

Query: 477 LHEIE-DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMY 534
            +++  +  V     TF  +LS  +  G + + ++    ++     +     +  L+ + 
Sbjct: 353 FNKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVL 412

Query: 535 SRCANVEAAFQVFKEM---EDRNVISWTSMITGFAKH 568
                 E A+ + K M    D  +  W +++ G   H
Sbjct: 413 GHAGRFEEAYDLIKGMPMQPDSGI--WGALLNGCKIH 447



 Score = 90.5 bits (223), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 136/285 (47%), Gaps = 11/285 (3%)

Query: 36  FIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
           F   P  +  L N LI  +  DG  + AI     M   G  PD  TY L LK+C    + 
Sbjct: 120 FDGMPKRNVFLWNVLIRAYARDGPHEVAIQLYRGMVDYGVEPDNFTYPLALKACAALLDL 179

Query: 95  HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
             G+ VH  +  +    +  +   L+ +Y+KCG +++A  +F  +   RD V W+SMI++
Sbjct: 180 ETGREVHERVLGTHWGEDMFVCAGLVDMYAKCGCVDDARAVFDRI-RVRDSVVWNSMIAA 238

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G+ ++A+ +  +M   G  P      + I A ++   +  G  ++GF  + G FD 
Sbjct: 239 YGQNGRPMEALSLCRDMAANGVGPTIATLVSTISAAADAAALPRGRELHGFGWRRG-FDR 297

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
              +  +L+DM+ K S  ++ A  +F+++ ++  V W  MI      G   +A++LF  M
Sbjct: 298 QDKLKTSLVDMYAK-SGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKM 356

Query: 275 -ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
            + +   PD  T  GV+SAC+   +    K+        GL +DV
Sbjct: 357 RVEAQVTPDNITFVGVLSACNHGGMVKEAKEFF------GLMVDV 395


>gi|302782375|ref|XP_002972961.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
 gi|300159562|gb|EFJ26182.1| hypothetical protein SELMODRAFT_98426 [Selaginella moellendorffii]
          Length = 601

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/600 (36%), Positives = 353/600 (58%), Gaps = 12/600 (2%)

Query: 265 RDAIRLFLDMILSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLALDVCVGC 322
           + A++LF   I      ++ T   V+ +C+ L  +    GK++H  AI  G   D+ V  
Sbjct: 11  KKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGFGTDLVVQN 70

Query: 323 SLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
           SL+ MYAKC   GS   +  VFD+M   N++S+T++I  Y  +  +  EA +L+  M+  
Sbjct: 71  SLIHMYAKC---GSFKFAAGVFDKMEPKNLISYTSMIQAYTHTA-KHVEAYELYKKMLSE 126

Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
            + P+ + +A+ L  C  + +    E ++       R    C  N+L+ MY R GR+  A
Sbjct: 127 GIMPDIYAYAAALAVCPTIRE---GEAIHVKLGNHERRTPVC-SNALVGMYGRFGRIASA 182

Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           +  F+ +  K+L SYN M+  +AK  +  KA  L  E+E   +  + +T+ S+L   S +
Sbjct: 183 KWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSKL 242

Query: 503 GAIGKGEQIHARIIKSGFESNHCIYN-ALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           GA+ +G++IH ++ K G +     YN AL++MY++C +   A  VF +   +NV +WTS+
Sbjct: 243 GALTEGKEIHKKV-KGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLKNVFTWTSL 301

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           ++ +++ G +   LE + +M  +G+ P+ +T+ A+ +ACSH+GL  EG  +FR+M ++H 
Sbjct: 302 MSAYSQPGQSQYRLEAYQRMNCEGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHW 361

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           IV    HY CM+DLLGR G L EA E +R+MP S DV+ W   L AC+V+GD ++G  A 
Sbjct: 362 IVPLQPHYTCMIDLLGRVGRLREAEELVRTMPYSPDVVTWTILLSACKVYGDLKIGARAY 421

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
           + I E +P D   ++L+ N+YA AG W  VA ++K +K+R L K  G S IEA  ++H+F
Sbjct: 422 KRITELNPPDSGPYLLMGNMYAKAGKWADVAEVKKMIKQRGLAKPPGKSMIEAQRRIHEF 481

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
             G+T+HP   EI A L ++  ++   GY PDT  VL ++ EE K + L  HSE++A+  
Sbjct: 482 VCGDTAHPLNQEIRARLQEVHEQLSHAGYEPDTKEVLVDVNEEVKPELLLFHSERMALGL 541

Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           GL+++     + + KNLR+C DCH+  K +S +  R++++RDS+RFH  + G CSC DYW
Sbjct: 542 GLLTSDAGATLHIVKNLRICPDCHSFFKLVSKMLHRKVLVRDSHRFHIFQRGSCSCGDYW 601



 Score =  144 bits (362), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 106/391 (27%), Positives = 191/391 (48%), Gaps = 21/391 (5%)

Query: 80  TYSLLLKSCIRSRNFHL--GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
           TY  +LKSC    + +L  GK +H          + V+ NSLI +Y+KCG    A  +F 
Sbjct: 31  TYVTVLKSCAHLGDDYLEDGKEIHRHAIAQGFGTDLVVQNSLIHMYAKCGSFKFAAGVFD 90

Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
            M   ++++S++SMI +Y +  K V+A  ++ +ML  G  P+ Y ++A +  C       
Sbjct: 91  KM-EPKNLISYTSMIQAYTHTAKHVEAYELYKKMLSEGIMPDIYAYAAALAVCPTIREGE 149

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
             H+  G   +     + VC   AL+ M+ +    + SA  VFD +  K+   +  MI  
Sbjct: 150 AIHVKLGNHER----RTPVCSN-ALVGMYGRFG-RIASAKWVFDGIRYKDLASYNNMIAV 203

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
             +      AI L+++M      P+ +T + V+ ACS+L   T GK++H          D
Sbjct: 204 FAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKKVKGGDQPTD 263

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
           V    +LV+MYAKC   GS  ++R VF+     NV +WT++++ Y Q  G+ +  ++ + 
Sbjct: 264 VAYNTALVNMYAKC---GSAHEARAVFNDCGLKNVFTWTSLMSAYSQP-GQSQYRLEAYQ 319

Query: 378 DMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMY 433
            M    V P+  TF ++  AC +  L D  +   +Y  A++    +     +   +I + 
Sbjct: 320 RMNCEGVIPDDVTFTAIFNACSHSGLPDEGL---LYFRAMREDHWIVPLQPHYTCMIDLL 376

Query: 434 ARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
            R GR+ +A +   ++ +  ++V++  ++ A
Sbjct: 377 GRVGRLREAEELVRTMPYSPDVVTWTILLSA 407



 Score =  141 bits (355), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 91/317 (28%), Positives = 159/317 (50%), Gaps = 8/317 (2%)

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV--AEQVYTHAVKRG 418
           G  Q     K+A++LF   I  ++  N  T+ +VLK+C +L D  +   ++++ HA+ +G
Sbjct: 2   GAYQENDLHKKALQLFKKSINEELQQNQATYVTVLKSCAHLGDDYLEDGKEIHRHAIAQG 61

Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              D  V NSLI MYA+ G  + A   F+ +  KNL+SY +M+ AY       +A+EL  
Sbjct: 62  FGTDLVVQNSLIHMYAKCGSFKFAAGVFDKMEPKNLISYTSMIQAYTHTAKHVEAYELYK 121

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++   G+    Y +A+ L+   +   I +GE IH ++      +  C  NAL+ MY R  
Sbjct: 122 KMLSEGIMPDIYAYAAALAVCPT---IREGEAIHVKLGNHERRTPVC-SNALVGMYGRFG 177

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
            + +A  VF  +  +++ S+ +MI  FAK+   ++A+ ++ +M    ++PN  TY +VL 
Sbjct: 178 RIASAKWVFDGIRYKDLASYNNMIAVFAKYDDGSKAISLYIEMEGRNLEPNLWTYTSVLD 237

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           ACS  G ++EG K              + +   +V++  + GS  EA        L  +V
Sbjct: 238 ACSKLGALTEG-KEIHKKVKGGDQPTDVAYNTALVNMYAKCGSAHEARAVFNDCGLK-NV 295

Query: 659 LVWRTFLGACRVHGDTE 675
             W + + A    G ++
Sbjct: 296 FTWTSLMSAYSQPGQSQ 312



 Score = 67.0 bits (162), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 99/209 (47%), Gaps = 5/209 (2%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           +DG   KAI     M  +   P+L TY+ +L +C +      GK +H  + +   +P  V
Sbjct: 208 DDG--SKAISLYIEMEGRNLEPNLWTYTSVLDACSKLGALTEGKEIHKKV-KGGDQPTDV 264

Query: 115 ILNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
             N+ L+++Y+KCG  +EA  +F   G K ++ +W+S++S+Y   G+    +  +  M  
Sbjct: 265 AYNTALVNMYAKCGSAHEARAVFNDCGLK-NVFTWTSLMSAYSQPGQSQYRLEAYQRMNC 323

Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
            G  P++  F+A+  ACS++     G + +  + +  +          +ID+  +     
Sbjct: 324 EGVIPDDVTFTAIFNACSHSGLPDEGLLYFRAMREDHWIVPLQPHYTCMIDLLGRVGRLR 383

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
           E+   V       + V WT++++ C   G
Sbjct: 384 EAEELVRTMPYSPDVVTWTILLSACKVYG 412


>gi|242041629|ref|XP_002468209.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
 gi|241922063|gb|EER95207.1| hypothetical protein SORBIDRAFT_01g041740 [Sorghum bicolor]
          Length = 635

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 212/548 (38%), Positives = 339/548 (61%), Gaps = 6/548 (1%)

Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
           DVC   +LV    +      +  +R +FDRM   +  SW+AI++ + + G + + A+ ++
Sbjct: 91  DVCSYNTLVAALGRSP--RGLASARALFDRMPRRDHFSWSAIVSAHARHG-QPRAALAIY 147

Query: 377 SDMIQGQVAP---NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
             M++   +    N FT +S L A      +    +++ H V+RG   D  V ++L  MY
Sbjct: 148 RRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRRGIDADAVVWSALADMY 207

Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
           A+ GR++DAR  F+ +  +++VS+  MV+ Y       + F L   +  +G+  + +T+A
Sbjct: 208 AKCGRVDDARSVFDRMPVRDVVSWTAMVERYFDARRDGEGFRLFVRMLRSGIQPNEFTYA 267

Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
            +L   +   +   G+Q+H R+ KS    +    +AL+ MYS+  ++  A +VF+ M   
Sbjct: 268 GVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGDMGTAVRVFRGMPKL 327

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           +++SWT+MI+G+A++G    AL  F  +L  G +P+ +T++ VLSAC+HAGL+ +G   F
Sbjct: 328 DLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLSACAHAGLVDKGLSIF 387

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
            S+ DE+GI    +HYAC++DLL RSG    A E I +M +  +  +W + LG CR+H +
Sbjct: 388 HSIKDEYGIEHTADHYACVIDLLSRSGLFERAEEMINTMSVKPNKFLWASLLGGCRIHKN 447

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
             L + AAE + E +P++PA ++ L+N+YAS G ++ V N R+ M+ + + K    SWIE
Sbjct: 448 VRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKGITKMPASSWIE 507

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
              ++H F VG+  HP+  ++YA L +L +K++E GY+ DT FVLH++E+EQK Q +  H
Sbjct: 508 VGTRMHVFLVGDKLHPQAEQVYALLKKLYVKMREEGYVADTGFVLHDVEDEQKQQDIGYH 567

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SE++AVAFG+I+T K  PI+VFKNLR+CGDCHT IK IS +  REI++RDSNRFHH K+G
Sbjct: 568 SERLAVAFGIIATPKGAPIKVFKNLRICGDCHTTIKLISKIVQREIIVRDSNRFHHFKNG 627

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 628 SCSCRDYW 635



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 142/516 (27%), Positives = 231/516 (44%), Gaps = 69/516 (13%)

Query: 95  HLGKLVHSLLTRSKLEPNSVI-LNSLISLYSKCG-DLNEANKIFKSMGNKRDIVSWSSMI 152
           H   L  +L   S L    V   N+L++   +    L  A  +F  M  +RD  SWS+++
Sbjct: 73  HPATLPDALALLSSLPSTDVCSYNTLVAALGRSPRGLASARALFDRM-PRRDHFSWSAIV 131

Query: 153 SSYVNRGKQVDAIHMFVEML-ELGFC--PNEYCFSAVIRACSNTENVAIGHIIYGFLLKC 209
           S++   G+   A+ ++  ML E G     NE+  S+ + A +       G  ++  +++ 
Sbjct: 132 SAHARHGQPRAALAIYRRMLREPGSAGVDNEFTASSALAAATAARCARAGRELHCHVVRR 191

Query: 210 GYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAI 268
           G  D+D  V  AL DM+ K G VD   A  VFD+M  ++ V WT M+ R        +  
Sbjct: 192 G-IDADAVVWSALADMYAKCGRVD--DARSVFDRMPVRDVVSWTAMVERYFDARRDGEGF 248

Query: 269 RLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS-LVDM 327
           RLF+ M+ SG  P+ FT +GV+ AC+E      GKQ+H    ++  A D C   S LV M
Sbjct: 249 RLFVRMLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKS-RAGDSCFAESALVHM 307

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
           Y+K    G +  + +VF  M   +++SWTA+I+GY Q+G  D EA++ F  +++    P+
Sbjct: 308 YSKY---GDMGTAVRVFRGMPKLDLVSWTAMISGYAQNGQPD-EALRYFDMLLRSGCRPD 363

Query: 388 HFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDAR 443
           H TF  VL AC +  L+D  ++     H++K    ++    +   +I + +RSG      
Sbjct: 364 HVTFVGVLSACAHAGLVDKGLS---IFHSIKDEYGIEHTADHYACVIDLLSRSG------ 414

Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
                LFE+     NTM                        V  + + +ASLL G     
Sbjct: 415 -----LFERAEEMINTM-----------------------SVKPNKFLWASLLGGC---- 442

Query: 504 AIGKGEQIH--ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
                 +IH   R+ +   E+   I     + Y   AN+ A+  +F E+E+   I     
Sbjct: 443 ------RIHKNVRLARWAAEALFEIEPENPATYVTLANIYASVGLFDEVENTRRIMELKG 496

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
           IT      +      +   ++ D + P      A+L
Sbjct: 497 ITKMPASSWIEVGTRMHVFLVGDKLHPQAEQVYALL 532



 Score = 83.6 bits (205), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 58/198 (29%), Positives = 102/198 (51%), Gaps = 17/198 (8%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M + G  P+  TY+ +L++C    +  LGK VH  +T+S+   +    ++L+ +YSK GD
Sbjct: 254 MLRSGIQPNEFTYAGVLRACAEFTSEKLGKQVHGRMTKSRAGDSCFAESALVHMYSKYGD 313

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +  A ++F+ M  K D+VSW++MIS Y   G+  +A+  F  +L  G  P+   F  V+ 
Sbjct: 314 MGTAVRVFRGM-PKLDLVSWTAMISGYAQNGQPDEALRYFDMLLRSGCRPDHVTFVGVLS 372

Query: 189 ACSNT----ENVAIGHII---YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
           AC++     + ++I H I   YG      ++    CV    ID+  +  +  E A ++ +
Sbjct: 373 ACAHAGLVDKGLSIFHSIKDEYGIEHTADHY---ACV----IDLLSRSGL-FERAEEMIN 424

Query: 242 KMTEK-NTVGWTLMITRC 258
            M+ K N   W  ++  C
Sbjct: 425 TMSVKPNKFLWASLLGGC 442


>gi|334186228|ref|NP_191896.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332646951|gb|AEE80472.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 884

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/714 (32%), Positives = 400/714 (56%), Gaps = 6/714 (0%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++++G    A+     M  +G    L ++  LLK+C + R+   G  +HSLL +      
Sbjct: 157 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I+N+L+S+Y+K  DL+ A ++F     K D V W+S++SSY   GK ++ + +F EM 
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G  PN Y   + + AC       +G  I+  +LK     S++ V  ALI M+ +    
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG-K 335

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           +  A ++  +M   + V W  +I    Q    ++A+  F DMI +G   D  +++ +++A
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
              L    +G +LH++ I+ G   ++ VG +L+DMY+KC +   +    + F RM D ++
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG---RAFLRMHDKDL 452

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           +SWT +I GY Q+     EA++LF D+ + ++  +     S+L+A   L    + ++++ 
Sbjct: 453 ISWTTVIAGYAQNDCH-VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +++G  LD  + N L+ +Y +   M  A + FES+  K++VS+ +M+ + A N N  +
Sbjct: 512 HILRKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A EL   + +TG+   +     +LS A+S+ A+ KG +IH  +++ GF     I  A++ 
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630

Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
           MY+ C ++++A  VF  +E + ++ +TSMI  +  HG    A+E+F KM  + + P+ I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690

Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
           ++A+L ACSHAGL+ EG    + M  E+ +    EHY C+VD+LGR+  + EA EF++ M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750

Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
                  VW   L ACR H + E+G+ AA+ +LE +P++P   +L+SN++A  G W  V 
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810

Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
            +R +MK   + K  GCSWIE D KVHKF   + SHP++ EIY +L ++  K++
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLE 864



 Score =  237 bits (604), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 157/590 (26%), Positives = 309/590 (52%), Gaps = 33/590 (5%)

Query: 12  IPPPSSFKPSNPSRQNLPPSSSP-PFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMT 70
           IP   S +  NP RQ+  P   P P +A                 DG + +A   LD+  
Sbjct: 32  IPTEPSCR-RNPFRQSNQPVQVPSPKLA---------------CFDGVLTEAFQRLDV-- 73

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS--KLEPNSVILNSLISLYSKCGD 128
            + N P ++ ++ +L+ C + R    G+ +HS + ++    E +  +   L+ +Y KCG 
Sbjct: 74  SENNSP-VEAFAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELD-FLAGKLVFMYGKCGS 131

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           L++A K+F  M + R   +W++MI +YV+ G+   A+ ++  M   G       F A+++
Sbjct: 132 LDDAEKVFDEMPD-RTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLK 190

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK-N 247
           AC+   ++  G  ++  L+K GY  +   V  AL+ M+ K   DL +A ++FD   EK +
Sbjct: 191 ACAKLRDIRSGSELHSLLVKLGYHSTGFIVN-ALVSMYAKND-DLSAARRLFDGFQEKGD 248

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
            V W  +++  +  G   + + LF +M ++G  P+ +T+   ++AC        GK++H+
Sbjct: 249 AVLWNSILSSYSTSGKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHA 308

Query: 308 WAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
             +++   + ++ V  +L+ MY +C   G +  + ++  +M + +V++W ++I GYVQ+ 
Sbjct: 309 SVLKSSTHSSELYVCNALIAMYTRC---GKMPQAERILRQMNNADVVTWNSLIKGYVQNL 365

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
              KEA++ FSDMI      +  +  S++ A G L +     +++ + +K G   +  VG
Sbjct: 366 MY-KEALEFFSDMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVG 424

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
           N+LI MY++        +AF  + +K+L+S+ T++  YA+N    +A EL  ++    + 
Sbjct: 425 NTLIDMYSKCNLTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRME 484

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
                  S+L  +S + ++   ++IH  I++ G   +  I N L+ +Y +C N+  A +V
Sbjct: 485 IDEMILGSILRASSVLKSMLIVKEIHCHILRKGL-LDTVIQNELVDVYGKCRNMGYATRV 543

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           F+ ++ ++V+SWTSMI+  A +G  + A+E+F +M+  G+  + +  + +
Sbjct: 544 FESIKGKDVVSWTSMISSSALNGNESEAVELFRRMVETGLSADSVALLCI 593



 Score =  182 bits (461), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 134/517 (25%), Positives = 252/517 (48%), Gaps = 24/517 (4%)

Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
           F+ V+  C     V+ G  ++  + K    F+ D   G  L+ M+ K GS+D   A KVF
Sbjct: 83  FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGKCGSLD--DAEKVF 139

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           D+M ++    W  MI      G P  A+ L+ +M + G      +   ++ AC++L    
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAII 359
           SG +LHS  ++ G      +  +LV MYAK   +  +  +R++FD   +  + + W +I+
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAK---NDDLSAARRLFDGFQEKGDAVLWNSIL 256

Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
           + Y  S G+  E ++LF +M     APN +T  S L AC     + + ++++   +K   
Sbjct: 257 SSYSTS-GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315

Query: 420 ALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
              +  V N+LI+MY R G+M  A +    +   ++V++N+++  Y +NL  ++A E   
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375

Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
           ++   G  +   +  S+++ +  +  +  G ++HA +IK G++SN  + N LI MYS+C 
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
                 + F  M D+++ISWT++I G+A++     ALE+F  +    ++ + +   ++L 
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495

Query: 599 ACS---HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
           A S      ++ E   H         ++Q       +VD+ G+  ++  A     S+   
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-----LVDVYGKCRNMGYATRVFESIK-G 549

Query: 656 ADVLVWRTFLGACRVHGD----TELGKHAAEMILEQD 688
            DV+ W + + +  ++G+     EL +   E  L  D
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586


>gi|357111415|ref|XP_003557509.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g02980-like [Brachypodium distachyon]
          Length = 615

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/571 (39%), Positives = 335/571 (58%), Gaps = 17/571 (2%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS-----RKVFDRMLDHNVMSW-TA 357
           QLH+ A+++GL         L+ +   CT  G+   +     R+VFDR+     + W   
Sbjct: 49  QLHAAAVKSGLQAHPAFVTRLLTL---CTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNT 105

Query: 358 IITGYVQ----SGGRD--KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
           ++ GY +     G R   +EA ++F  M++  VAP+ +TF S+LKAC          Q +
Sbjct: 106 LLRGYARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAH 165

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
             AVK G A  + V  +LI+MYA  G    AR  F  +  + +VSYN M+ A  ++    
Sbjct: 166 GVAVKVGAAEHEYVLPTLINMYAECGDARAARTMFGRVDGECVVSYNAMITAAVRSSRPG 225

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
           +A  L  E++  G+  ++ T  S+LS  + +GA+  G  IH  + K   +S   +  ALI
Sbjct: 226 EALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALI 285

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
            MY +C ++E A  VF+ ME R+  +W+ MI  +A H +   A+ +F +M   GIKP+ +
Sbjct: 286 DMYGKCGSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDV 345

Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
           T++ VL ACSH+GL+SEG ++F SM  E G+V  ++HY C+ DLL RSG L  A EFI  
Sbjct: 346 TFLGVLYACSHSGLVSEGLQYFDSM-REFGLVPGIKHYGCVADLLARSGQLDRAYEFIDE 404

Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
           +P+    ++WRT L AC   GD +LGK   E ILE D      +++ SNL A+ G WE +
Sbjct: 405 LPIKPTAILWRTLLSACGSRGDADLGKQVFERILELDDSHGGDYVIFSNLCANTGRWEEM 464

Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
             +RK M E+ ++K  GCS IE DN+VH+F  G+  HPK+L+    +D +  ++K  GY+
Sbjct: 465 NRVRKLMNEKGVVKVPGCSSIEVDNRVHEFFAGDGRHPKSLDARRMVDGVIEQLKLAGYV 524

Query: 772 PDTNFVLH-ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
           P+T+ V H E+ EE+K   L  HSEK+A++FGL++TS    +RV KNLRVC DCH+  K 
Sbjct: 525 PNTSHVFHVEMGEEEKAVSLRYHSEKLAISFGLLNTSPGTTLRVVKNLRVCPDCHSMAKL 584

Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +SMV  R I+LRD NRFHH +DG CSC DYW
Sbjct: 585 VSMVFNRRIILRDLNRFHHFEDGVCSCGDYW 615



 Score =  138 bits (348), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 215/479 (44%), Gaps = 73/479 (15%)

Query: 100 VHSLLTRSKLEPNSVILNSLISL-----YSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
           +H+   +S L+ +   +  L++L      +K   L+ A ++F  +    D+V +++++  
Sbjct: 50  LHAAAVKSGLQAHPAFVTRLLTLCTDQGAAKPAQLSYARQVFDRIPGPGDVVWYNTLLRG 109

Query: 155 YVN-------RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           Y         R    +A  +FV MLE G  P+ Y F ++++AC+       G   +G  +
Sbjct: 110 YARCSAAGGARPPAEEAARVFVRMLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAV 169

Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
           K G  + +  +   LI+M+ +   D  +A  +F ++  +  V +  MIT   +   P +A
Sbjct: 170 KVGAAEHEYVLP-TLINMYAECG-DARAARTMFGRVDGECVVSYNAMITAAVRSSRPGEA 227

Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
           + LF +M   G      TL  V+SAC+ L     G+ +H +  +  L   V V  +L+DM
Sbjct: 228 LVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNTALIDM 287

Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV-QSGGRDKEAVKLFSDMIQGQVAP 386
           Y KC   GS++D+  VF  M   +  +W+ +I  Y   S GR  EA+ LF +M +  + P
Sbjct: 288 YGKC---GSLEDAISVFQGMESRDRQAWSVMIVAYANHSYGR--EAISLFEEMKKQGIKP 342

Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
           +  TF  VL AC +                                   SG + +  + F
Sbjct: 343 DDVTFLGVLYACSH-----------------------------------SGLVSEGLQYF 367

Query: 447 ESLFEKNLVS----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
           +S+ E  LV     Y  + D  A++   ++A+E + E+    +  +A  + +LLS   S 
Sbjct: 368 DSMREFGLVPGIKHYGCVADLLARSGQLDRAYEFIDELP---IKPTAILWRTLLSACGSR 424

Query: 503 GAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANV---EAAFQVFKEMEDRNVI 556
           G    G+Q+  RI++       ++ I++ L      CAN    E   +V K M ++ V+
Sbjct: 425 GDADLGKQVFERILELDDSHGGDYVIFSNL------CANTGRWEEMNRVRKLMNEKGVV 477



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 178/392 (45%), Gaps = 52/392 (13%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  PD  T+  LLK+C  +R    G+  H +  +     +  +L +LI++Y++CGD
Sbjct: 133 MLEEGVAPDTYTFVSLLKACAAARAGEEGRQAHGVAVKVGAAEHEYVLPTLINMYAECGD 192

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
              A  +F  + +   +VS+++MI++ V   +  +A+ +F EM   G         +V+ 
Sbjct: 193 ARAARTMFGRV-DGECVVSYNAMITAAVRSSRPGEALVLFREMQAKGLKLTSVTLISVLS 251

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           AC+    + +G  I+ ++ K    DS V V  ALIDM+ K GS  LE A  VF  M  ++
Sbjct: 252 ACALLGALELGRWIHEYVRKV-QLDSLVKVNTALIDMYGKCGS--LEDAISVFQGMESRD 308

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
              W++MI         R+AI LF +M   G  PD  T  GV+ ACS   L + G Q   
Sbjct: 309 RQAWSVMIVAYANHSYGREAISLFEEMKKQGIKPDDVTFLGVLYACSHSGLVSEGLQYFD 368

Query: 308 WAIRTGLALDVC-VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG 366
                GL   +   GC + D+ A+    G +D + +  D +                   
Sbjct: 369 SMREFGLVPGIKHYGC-VADLLAR---SGQLDRAYEFIDEL------------------- 405

Query: 367 GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
                            + P    + ++L ACG+  D+++ +QV+   ++    LDD  G
Sbjct: 406 ----------------PIKPTAILWRTLLSACGSRGDADLGKQVFERILE----LDDSHG 445

Query: 427 NSLI---SMYARSGRMEDARKAFESLFEKNLV 455
              +   ++ A +GR E+  +  + + EK +V
Sbjct: 446 GDYVIFSNLCANTGRWEEMNRVRKLMNEKGVV 477



 Score = 82.8 bits (203), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 99/206 (48%), Gaps = 4/206 (1%)

Query: 58  RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
           R  +A+     M  KG      T   +L +C       LG+ +H  + + +L+    +  
Sbjct: 223 RPGEALVLFREMQAKGLKLTSVTLISVLSACALLGALELGRWIHEYVRKVQLDSLVKVNT 282

Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
           +LI +Y KCG L +A  +F+ M   RD  +WS MI +Y N     +AI +F EM + G  
Sbjct: 283 ALIDMYGKCGSLEDAISVFQGM-ESRDRQAWSVMIVAYANHSYGREAISLFEEMKKQGIK 341

Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
           P++  F  V+ ACS++  V+ G   +  + + G        GC + D+  + S  L+ AY
Sbjct: 342 PDDVTFLGVLYACSHSGLVSEGLQYFDSMREFGLVPGIKHYGC-VADLLAR-SGQLDRAY 399

Query: 238 KVFDKMTEKNT-VGWTLMITRCTQLG 262
           +  D++  K T + W  +++ C   G
Sbjct: 400 EFIDELPIKPTAILWRTLLSACGSRG 425


>gi|12957718|gb|AAK09236.1|AC084320_23 hypothetical protein [Oryza sativa Japonica Group]
 gi|108711388|gb|ABF99183.1| pentatricopeptide, putative [Oryza sativa Japonica Group]
          Length = 843

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/695 (33%), Positives = 394/695 (56%), Gaps = 7/695 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T+  ++KSC       LG+LVH       L+ +  + ++LI +Y+  G L +A ++
Sbjct: 144 PDSHTFPYVVKSCAALGAIALGRLVHRTARTLGLDGDMFVGSALIKMYANGGLLWDARQV 203

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  +RD V W+ M+  YV  G    A+ +F +M   G  PN    +  +   +   +
Sbjct: 204 FDGMA-ERDCVLWNVMMDGYVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESD 262

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++   +K G  +S+V V   L+ M+ K    L+  +K+F  M   + V W  MI
Sbjct: 263 LFFGVQLHTLAVKYG-LESEVAVANTLVSMYAKCKC-LDDGWKLFGLMPRDDLVTWNGMI 320

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           + C Q G    A+ LF DM  SG  PD  TL  ++ A ++L  F  GK+LH + +R  + 
Sbjct: 321 SGCVQNGFVDQALLLFCDMQKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVH 380

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           +DV +  +LVD+Y KC    +V  ++ V+D     +V+  + +I+GYV +G   +EAVK+
Sbjct: 381 MDVFLVSALVDIYFKCR---AVRMAQSVYDSSKAIDVVIGSTMISGYVLNG-MSQEAVKM 436

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  +++  + PN    ASVL AC ++    + ++++++A+K        V ++L+ MYA+
Sbjct: 437 FRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAK 496

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR++ +   F  +  K+ V++N+M+ ++A+N   E+A  L  E+   GV  S  T +S+
Sbjct: 497 CGRLDLSHYIFSKISAKDEVTWNSMISSFAQNGEPEEALNLFREMCMEGVKYSNVTISSV 556

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           LS  +S+ AI  G++IH  +IK    ++    +ALI MY +C N+E A +VF+ M ++N 
Sbjct: 557 LSACASLPAIYYGKEIHGVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNE 616

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW S+I  +  +G    ++ +   M  +G K + +T++A++SAC+HAG + EG + FR 
Sbjct: 617 VSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLFRC 676

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M +E+ I  RMEH+ACMVDL  R+G L +A+E I  MP   D  +W   L ACRVH + E
Sbjct: 677 MTEEYQIAPRMEHFACMVDLYSRAGKLDKAMELIVDMPFKPDAGIWGALLHACRVHRNVE 736

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           L + A++ + + DP +   ++L+SN+ A AG W+ V+ +R+ MK+  + K  G SW++ +
Sbjct: 737 LAEIASQELFKLDPHNSGYYVLMSNINAVAGRWDGVSKVRRLMKDTKVQKIPGYSWVDVN 796

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
           N  H F   + SHP + +IY  L  + L+++E G+
Sbjct: 797 NTSHLFVAADKSHPDSEDIYMSLKSILLELREEGH 831



 Score =  195 bits (495), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 243/495 (49%), Gaps = 10/495 (2%)

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV--KGSVDLESAYKVFDK 242
           AV+R C +  ++++G  ++G  +  G   +D  +   L+ M+V  +   D  + +    +
Sbjct: 44  AVLRGCVSPSHLSLGLQVHGRAVTAGLHATDTALQTRLVGMYVLARRFRDAVAVFSSLPR 103

Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL--SGFLPDRFTLSGVVSACSELELFT 300
                 + W  +I   T  G  R A+  +L M    S  LPD  T   VV +C+ L    
Sbjct: 104 GAAACALPWNWLIRGLTMAGDYRSALLFYLKMWAHPSAPLPDSHTFPYVVKSCAALGAIA 163

Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIIT 360
            G+ +H  A   GL  D+ VG +L+ MYA     G + D+R+VFD M + + + W  ++ 
Sbjct: 164 LGRLVHRTARTLGLDGDMFVGSALIKMYAN---GGLLWDARQVFDGMAERDCVLWNVMMD 220

Query: 361 GYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRA 420
           GYV++G     AV+LF DM      PN  T A  L       D     Q++T AVK G  
Sbjct: 221 GYVKAGSV-SSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLE 279

Query: 421 LDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
            +  V N+L+SMYA+   ++D  K F  +   +LV++N M+    +N   ++A  L  ++
Sbjct: 280 SEVAVANTLVSMYAKCKCLDDGWKLFGLMPRDDLVTWNGMISGCVQNGFVDQALLLFCDM 339

Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
           + +G+   + T  SLL   + +    +G+++H  I+++    +  + +AL+ +Y +C  V
Sbjct: 340 QKSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHMDVFLVSALVDIYFKCRAV 399

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSAC 600
             A  V+   +  +V+  ++MI+G+  +G +  A+++F  +L  GI+PN +   +VL AC
Sbjct: 400 RMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLPAC 459

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
           +    +  G +   S   ++    R    + ++D+  + G L  +  +I S   + D + 
Sbjct: 460 ASMAAMKLG-QELHSYALKNAYEGRCYVESALMDMYAKCGRLDLS-HYIFSKISAKDEVT 517

Query: 661 WRTFLGACRVHGDTE 675
           W + + +   +G+ E
Sbjct: 518 WNSMISSFAQNGEPE 532



 Score =  194 bits (493), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 128/501 (25%), Positives = 256/501 (51%), Gaps = 12/501 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           ++  G V  A+     M   G  P+  T +  L       +   G  +H+L  +  LE  
Sbjct: 222 YVKAGSVSSAVELFGDMRASGCEPNFATLACFLSVSATESDLFFGVQLHTLAVKYGLESE 281

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+L+S+Y+KC  L++  K+F  M  + D+V+W+ MIS  V  G    A+ +F +M 
Sbjct: 282 VAVANTLVSMYAKCKCLDDGWKLFGLM-PRDDLVTWNGMISGCVQNGFVDQALLLFCDMQ 340

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLK-CGYFDSDVCVGCALIDMFVKGSV 231
           + G  P+     +++ A ++      G  ++G++++ C +   DV +  AL+D++ K   
Sbjct: 341 KSGIRPDSVTLVSLLPALTDLNGFNQGKELHGYIVRNCVHM--DVFLVSALVDIYFKCRA 398

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
            +  A  V+D     + V  + MI+     G  ++A+++F  ++  G  P+   ++ V+ 
Sbjct: 399 -VRMAQSVYDSSKAIDVVIGSTMISGYVLNGMSQEAVKMFRYLLEQGIRPNAVAIASVLP 457

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+ +     G++LHS+A++        V  +L+DMYAKC   G +D S  +F ++   +
Sbjct: 458 ACASMAAMKLGQELHSYALKNAYEGRCYVESALMDMYAKC---GRLDLSHYIFSKISAKD 514

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
            ++W ++I+ + Q+ G  +EA+ LF +M    V  ++ T +SVL AC +L      ++++
Sbjct: 515 EVTWNSMISSFAQN-GEPEEALNLFREMCMEGVKYSNVTISSVLSACASLPAIYYGKEIH 573

Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
              +K     D    ++LI MY + G +E A + FES+ EKN VS+N+++ +Y      +
Sbjct: 574 GVVIKGPIRADLFAESALIDMYGKCGNLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVK 633

Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNA 529
           ++  LL  +++ G      TF +L+S  +  G + +G ++  R +   ++    +  +  
Sbjct: 634 ESVSLLRHMQEEGFKADHVTFLALVSACAHAGQVQEGLRLF-RCMTEEYQIAPRMEHFAC 692

Query: 530 LISMYSRCANVEAAFQVFKEM 550
           ++ +YSR   ++ A ++  +M
Sbjct: 693 MVDLYSRAGKLDKAMELIVDM 713



 Score =  122 bits (306), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 97/347 (27%), Positives = 170/347 (48%), Gaps = 41/347 (11%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G  Q+A+     + ++G  P+    + +L +C       LG+ +HS   ++  E 
Sbjct: 424 YVLN-GMSQEAVKMFRYLLEQGIRPNAVAIASVLPACASMAAMKLGQELHSYALKNAYEG 482

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              + ++L+ +Y+KCG L+ ++ IF  +  K D V+W+SMISS+   G+  +A+++F EM
Sbjct: 483 RCYVESALMDMYAKCGRLDLSHYIFSKISAK-DEVTWNSMISSFAQNGEPEEALNLFREM 541

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G   +    S+V+ AC++   +  G  I+G ++K G   +D+    ALIDM+ K   
Sbjct: 542 CMEGVKYSNVTISSVLSACASLPAIYYGKEIHGVVIK-GPIRADLFAESALIDMYGKCG- 599

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +LE A++VF+ M EKN V W  +I      G  ++++ L   M   GF  D  T   +VS
Sbjct: 600 NLEWAHRVFESMPEKNEVSWNSIIASYGAYGLVKESVSLLRHMQEEGFKADHVTFLALVS 659

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           AC+           H+  ++ GL L  C                 + +  ++  RM +H 
Sbjct: 660 ACA-----------HAGQVQEGLRLFRC-----------------MTEEYQIAPRM-EH- 689

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
              +  ++  Y ++G  DK A++L  DM      P+   + ++L AC
Sbjct: 690 ---FACMVDLYSRAGKLDK-AMELIVDM---PFKPDAGIWGALLHAC 729


>gi|302804779|ref|XP_002984141.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
 gi|300147990|gb|EFJ14651.1| hypothetical protein SELMODRAFT_119895 [Selaginella moellendorffii]
          Length = 487

 Score =  427 bits (1098), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/488 (42%), Positives = 309/488 (63%), Gaps = 6/488 (1%)

Query: 379 MIQGQVAPNHFTFASVLKACGNLL-DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           M Q  V P+   F + L ACG  L D  + + +++  ++ G   +  V  +L++MY ++G
Sbjct: 1   MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV-GTSA--YTFAS 494
            +++A + F  L  K+LVS+  ++ AY++     +A +L  E+   G+ GT      FA 
Sbjct: 61  CLDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN-ALISMYSRCANVEAAFQVFKEMEDR 553
           LL   +++ A  +G   H RI + G++S+  +    +I+MY +C N+ AA +VF  M +R
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSER 180

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           + ++WT++I+G+A HG +  +L +F++M  DG KP+G++ + VLS CSHAGL+ +GW  F
Sbjct: 181 DTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFF 240

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             +  E G+    +HY CM+DLLGRSG L  A   IR MP  A  + W  FL AC+VH D
Sbjct: 241 LDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSD 300

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
           TE GK AAE +LE +P  PAA++ LSN+YA+AG W+ V  +R  MK   L K+ G S IE
Sbjct: 301 TERGKRAAEKVLELEPV-PAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIE 359

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
            +++VH+F  G+ SHP+  EIY  L+ L  +++  GY+PDT  VL  + EEQK + L  H
Sbjct: 360 VNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFH 419

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+AFGL+ST     +R+ KNLRVCGDCHTA K++S + GREI +RDS RFHH +DG
Sbjct: 420 SEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDG 479

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 480 HCSCGDYW 487



 Score =  137 bits (346), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 78/238 (32%), Positives = 135/238 (56%), Gaps = 6/238 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M Q+G  PD   +   L +C  +  +  LGKL+HS +  + LE N+V+  +L+++Y K G
Sbjct: 1   MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF---CPNEYCFS 184
            L+EA ++F+ +G K D+VSW++++S+Y       +A+ +F EM   G     P+   F+
Sbjct: 61  CLDEATRVFRGLGRK-DLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFA 119

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            +++AC+     A G + +  + +CGY  SD  +G  +I+M+ K   +L +A++VFD M+
Sbjct: 120 FLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCG-NLRAAHEVFDGMS 178

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           E++TV WT +I+     G   +++ +F  M   G  PD  +L  V+S CS   L   G
Sbjct: 179 ERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236



 Score =  108 bits (271), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 154/317 (48%), Gaps = 27/317 (8%)

Query: 171 MLELGFCPNEYCFSAVIRACSNT-ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           M + G  P++ CF A + AC     ++ +G +I+  +L+ G  +S+  V  AL++M+ K 
Sbjct: 1   MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAG-LESNTVVATALVNMYGKA 59

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF---LPDRFTL 286
              L+ A +VF  +  K+ V WT +++  ++    R+A++LF +M L G     PDR   
Sbjct: 60  GC-LDEATRVFRGLGRKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYF 118

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           + ++ AC+ L     G+  H      G  + D  +G  +++MY KC   G++  + +VFD
Sbjct: 119 AFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKC---GNLRAAHEVFD 175

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M + + ++WT II+GY    G  +E++ +F  M Q    P+  +   VL  C +   + 
Sbjct: 176 GMSERDTVAWTTIISGYAHH-GHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSH---AG 231

Query: 406 VAEQVY--------THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVS 456
           + EQ +           V+ G     C    +I +  RSG +E A      + F+   ++
Sbjct: 232 LVEQGWDFFLDITKEFGVEPGEKHYGC----MIDLLGRSGDLEAAEVMIRRMPFQATAMN 287

Query: 457 YNTMVDAYAKNLNSEKA 473
           +   + A   + ++E+ 
Sbjct: 288 WAIFLAACKVHSDTERG 304


>gi|125547694|gb|EAY93516.1| hypothetical protein OsI_15309 [Oryza sativa Indica Group]
          Length = 613

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 211/528 (39%), Positives = 329/528 (62%), Gaps = 9/528 (1%)

Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
           G  D +R++F  M   +V SW  +++G  +SG  ++  V   +  ++  V+ N       
Sbjct: 94  GDADGARRLFASMPVRDVASWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNAMVSGF- 152

Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
             AC    D + AE+ + +A ++    D  +  +++S Y   G +  A K FE++  +NL
Sbjct: 153 --ACSG--DMSTAEEWFRNAPEKE---DAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNL 205

Query: 455 VSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
           VS+N +V  Y KN +++ A  L    + +  V  +A T +S+L G S++ A+G G+QIH 
Sbjct: 206 VSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQ 265

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
             +K     N  +  +L+SMY +C ++ +A  +F EM  R+V++W +MI+G+A+HG    
Sbjct: 266 WCMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMHTRDVVAWNAMISGYAQHGDGKE 325

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           A+ +F +M  +G++PN IT++ VL+AC H GL   G + F  M + +GI  R++HY+CMV
Sbjct: 326 AINLFERMKDEGVEPNWITFVVVLTACIHTGLCDFGIQCFEGMQELYGIEPRVDHYSCMV 385

Query: 634 DLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPA 693
           DLL R+G L  A++FIRSMP       + T L ACRV+ + E  + AA  ++E+DPQ   
Sbjct: 386 DLLCRAGKLERAVDFIRSMPFEPHPSAYGTLLAACRVYKNLEFAELAAGKLIEKDPQSAG 445

Query: 694 AHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLE 753
           A++ L+N+YA A  W+ V+ +R+ MK+  ++K  G SWIE    +H+F   +  HP+   
Sbjct: 446 AYVQLANIYAVANQWDDVSRVRRWMKDNTVVKTPGYSWIEIKGVLHEFRSNDRLHPQLYL 505

Query: 754 IYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIR 813
           I+ +L QLA ++KE GY+PD +FVLH+++E  KVQ L +HSEK+A+AFGLIST+    +R
Sbjct: 506 IHEKLGQLAERMKEMGYVPDLDFVLHDVDETMKVQMLMRHSEKLAIAFGLISTAHGMTLR 565

Query: 814 VFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           +FKNLRVCGDCH A K ISM+  REI+LRD+ RFHH + G CSC+DYW
Sbjct: 566 IFKNLRVCGDCHNAAKVISMIEDREIILRDTTRFHHFRGGHCSCDDYW 613



 Score =  126 bits (316), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 174/362 (48%), Gaps = 29/362 (8%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P+ V  N+L+  +   GD + A ++F SM   RD+ SW++M+S     G   +A  +F+ 
Sbjct: 78  PDVVSYNTLLLCHFASGDADGARRLFASM-PVRDVASWNTMVSGLSKSGAVEEAKVVFLA 136

Query: 171 MLELGFCPNEYCFSAVIR--ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
           M       N   ++A++   ACS   + A          +  + ++       L    V 
Sbjct: 137 MP----VRNSVSWNAMVSGFACSGDMSTA----------EEWFRNAPEKEDAVLWTAMVS 182

Query: 229 GSVDLES---AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL-SGFLPDRF 284
           G +D+ +   A K F+ M  +N V W  ++    +     DA+RLF  M+  +   P+  
Sbjct: 183 GYMDIGNVVKAIKYFEAMPVRNLVSWNAVVAGYVKNSHADDALRLFRTMVREANVQPNAS 242

Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVF 344
           TLS V+  CS L     GKQ+H W ++  L+ ++ VG SLV MY KC   G +  +  +F
Sbjct: 243 TLSSVLLGCSNLSALGFGKQIHQWCMKLLLSRNLTVGTSLVSMYCKC---GDLSSACILF 299

Query: 345 DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
             M   +V++W A+I+GY Q G   KEA+ LF  M    V PN  TF  VL AC +    
Sbjct: 300 GEMHTRDVVAWNAMISGYAQHGD-GKEAINLFERMKDEGVEPNWITFVVVLTACIHTGLC 358

Query: 405 NVAEQVYTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMV 461
           +   Q +   ++    ++  V   + ++ +  R+G++E A     S+ FE +  +Y T++
Sbjct: 359 DFGIQCF-EGMQELYGIEPRVDHYSCMVDLLCRAGKLERAVDFIRSMPFEPHPSAYGTLL 417

Query: 462 DA 463
            A
Sbjct: 418 AA 419



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 46/142 (32%), Positives = 72/142 (50%), Gaps = 2/142 (1%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGN-HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           ++ +     A+     M ++ N  P+  T S +L  C        GK +H    +  L  
Sbjct: 215 YVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFGKQIHQWCMKLLLSR 274

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           N  +  SL+S+Y KCGDL+ A  +F  M + RD+V+W++MIS Y   G   +AI++F  M
Sbjct: 275 NLTVGTSLVSMYCKCGDLSSACILFGEM-HTRDVVAWNAMISGYAQHGDGKEAINLFERM 333

Query: 172 LELGFCPNEYCFSAVIRACSNT 193
            + G  PN   F  V+ AC +T
Sbjct: 334 KDEGVEPNWITFVVVLTACIHT 355



 Score = 80.5 bits (197), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 72/307 (23%), Positives = 139/307 (45%), Gaps = 43/307 (14%)

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARS-GRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           AE+ +    ++  A  +C    L++ YAR+ GR+ DAR  F+ +   ++VSYNT++  + 
Sbjct: 36  AEEAFVSTPRKTTATYNC----LLAGYARAPGRLADARHLFDRIPTPDVVSYNTLLLCHF 91

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI---------- 515
            + +++ A  L   +    V     ++ +++SG S  GA+ + + +   +          
Sbjct: 92  ASGDADGARRLFASMPVRDVA----SWNTMVSGLSKSGAVEEAKVVFLAMPVRNSVSWNA 147

Query: 516 IKSGF------------------ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
           + SGF                  + +  ++ A++S Y    NV  A + F+ M  RN++S
Sbjct: 148 MVSGFACSGDMSTAEEWFRNAPEKEDAVLWTAMVSGYMDIGNVVKAIKYFEAMPVRNLVS 207

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
           W +++ G+ K+  A  AL +F  M+ +  ++PN  T  +VL  CS+   +  G K     
Sbjct: 208 WNAVVAGYVKNSHADDALRLFRTMVREANVQPNASTLSSVLLGCSNLSALGFG-KQIHQW 266

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             +  + + +     +V +  + G L+ A      M  + DV+ W   +     HGD   
Sbjct: 267 CMKLLLSRNLTVGTSLVSMYCKCGDLSSACILFGEMH-TRDVVAWNAMISGYAQHGD--- 322

Query: 677 GKHAAEM 683
           GK A  +
Sbjct: 323 GKEAINL 329


>gi|302780908|ref|XP_002972228.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
 gi|300159695|gb|EFJ26314.1| hypothetical protein SELMODRAFT_97343 [Selaginella moellendorffii]
          Length = 487

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 209/488 (42%), Positives = 309/488 (63%), Gaps = 6/488 (1%)

Query: 379 MIQGQVAPNHFTFASVLKACGNLL-DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
           M Q  V P+   F + L ACG  L D  + + +++  ++ G   +  V  +L++MY ++G
Sbjct: 1   MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV-GTSA--YTFAS 494
            +++A + F  L  K+LVS+  ++ AY++     +A +L  E+   G+ GT      FA 
Sbjct: 61  CLDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFAF 120

Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN-ALISMYSRCANVEAAFQVFKEMEDR 553
           LL   +++ A  +G   H RI + G++S+  +    +I+MY +C N+ AA +VF  M +R
Sbjct: 121 LLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCGNLRAAHEVFDGMSER 180

Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
           + ++WT++I+G+A HG +  +L +F++M  DG KP+G++ + VLS CSHAGL+ +GW  F
Sbjct: 181 DTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQGWDFF 240

Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
             +  E G+    +HY CM+DLLGRSG L  A   IR MP  A  + W  FL AC+VH D
Sbjct: 241 LDITKEFGVEPGEKHYGCMIDLLGRSGDLEAAEVMIRRMPFQATAMNWAIFLAACKVHSD 300

Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
           TE GK AAE +LE +P  PAA++ LSN+YA+AG W+ V  +R  MK   L K+ G S IE
Sbjct: 301 TERGKRAAEKVLELEPV-PAAYVSLSNIYAAAGEWDQVDRVRSAMKAMGLQKDPGRSSIE 359

Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
            +++VH+F  G+ SHP+  EIY  L+ L  +++  GY+PDT  VL  + EEQK + L  H
Sbjct: 360 VNSRVHEFWAGDKSHPRAAEIYGLLESLTRQMEGSGYVPDTKLVLLNVSEEQKERLLCFH 419

Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
           SEK+A+AFGL+ST     +R+ KNLRVCGDCHTA K++S + GREI +RDS RFHH +DG
Sbjct: 420 SEKLAIAFGLLSTPAGSSLRIIKNLRVCGDCHTAAKFVSRIAGREIFMRDSQRFHHFQDG 479

Query: 854 KCSCNDYW 861
            CSC DYW
Sbjct: 480 HCSCGDYW 487



 Score =  135 bits (340), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 76/238 (31%), Positives = 135/238 (56%), Gaps = 6/238 (2%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRS-RNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
           M Q+G  PD   +   L +C  +  +  LGKL+HS +  + LE N+V+  +L+++Y K G
Sbjct: 1   MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAGLESNTVVATALVNMYGKAG 60

Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF---CPNEYCFS 184
            L+EA ++F+ +  ++D+VSW++++S+Y       +A+ +F EM   G     P+   F+
Sbjct: 61  CLDEATRVFRGL-ERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYFA 119

Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
            +++AC+     A G + +  + +CGY  SD  +G  +I+M+ K   +L +A++VFD M+
Sbjct: 120 FLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKCG-NLRAAHEVFDGMS 178

Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
           E++TV WT +I+     G   +++ +F  M   G  PD  +L  V+S CS   L   G
Sbjct: 179 ERDTVAWTTIISGYAHHGHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSHAGLVEQG 236



 Score =  108 bits (271), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 82/317 (25%), Positives = 154/317 (48%), Gaps = 27/317 (8%)

Query: 171 MLELGFCPNEYCFSAVIRACSNT-ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
           M + G  P++ CF A + AC     ++ +G +I+  +L+ G  +S+  V  AL++M+ K 
Sbjct: 1   MQQEGVLPDKICFVATLNACGGALADLRLGKLIHSCVLEAG-LESNTVVATALVNMYGKA 59

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF---LPDRFTL 286
              L+ A +VF  +  K+ V WT +++  ++    R+A++LF +M L G     PDR   
Sbjct: 60  GC-LDEATRVFRGLERKDLVSWTALMSAYSREDLYREALQLFREMTLHGLDGTKPDRSYF 118

Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGL-ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           + ++ AC+ L     G+  H      G  + D  +G  +++MY KC   G++  + +VFD
Sbjct: 119 AFLLQACATLSAAAEGRLAHRRIQECGYDSSDGVLGLGIINMYGKC---GNLRAAHEVFD 175

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            M + + ++WT II+GY    G  +E++ +F  M Q    P+  +   VL  C +   + 
Sbjct: 176 GMSERDTVAWTTIISGYAHH-GHSEESLLMFWRMQQDGSKPDGVSLLCVLSVCSH---AG 231

Query: 406 VAEQVY--------THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVS 456
           + EQ +           V+ G     C    +I +  RSG +E A      + F+   ++
Sbjct: 232 LVEQGWDFFLDITKEFGVEPGEKHYGC----MIDLLGRSGDLEAAEVMIRRMPFQATAMN 287

Query: 457 YNTMVDAYAKNLNSEKA 473
           +   + A   + ++E+ 
Sbjct: 288 WAIFLAACKVHSDTERG 304


>gi|147805129|emb|CAN64485.1| hypothetical protein VITISV_035038 [Vitis vinifera]
          Length = 1740

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/674 (36%), Positives = 365/674 (54%), Gaps = 81/674 (12%)

Query: 264  PRDAIRLFLDMILSGFLPDRFTLSGVV---SACSEL----ELFTSGKQLHS-WAIRTGLA 315
            P  A++    ++LS   P +FT   VV   + C ++          K+LHS   I   L 
Sbjct: 999  PPSAVKQLQTLVLSIQKP-KFTQQXVVLTENLCGQILDKNPDIKYLKKLHSKICIDHDLH 1057

Query: 316  LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
             +  +G  L+  YA C   G    +R +FD +   NV+ +  +I  YV +     +A+ +
Sbjct: 1058 SNPSLGIKLMRAYAVC---GEPWSTRHIFDEIPKKNVVFFNVMIRSYVNNHLY-SDALLV 1113

Query: 376  FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY-- 433
            F +M    + P+H+T+  VLKA     D  V  Q++   V+ G  L+  VGN LISMY  
Sbjct: 1114 FKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGK 1173

Query: 434  -----------------------------ARSGRMEDA---------------------- 442
                                         AR+G+ +DA                      
Sbjct: 1174 CGCLVEACRVLDZMPCRDVVSWNSLVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASL 1233

Query: 443  ---------------RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
                           ++ F  L  K+LVS+N M+  Y  N    +A ++  ++ED  V  
Sbjct: 1234 LPAVTNTCLDNVSFVKEMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDP 1293

Query: 488  SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVF 547
             A + AS+L     + A+  G +IH  +++   + N  + NALI MY++C  +E A +VF
Sbjct: 1294 DAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVF 1353

Query: 548  KEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
             +M+ R+V+SWTSMI+ +  +G    A+ +F +M   G+ P+ I +++VLSACSHAGL+ 
Sbjct: 1354 DQMKFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLD 1413

Query: 608  EGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
            EG  +F+ M +E  IV R+EH+ CMVDLLGR+G + EA  FI+ MP+  +  VW   L A
Sbjct: 1414 EGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473

Query: 668  CRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEA 727
            CRV+ +  +G  AA+ + +  P+    ++LLSN+YA AG WE V  +R  MK + + K  
Sbjct: 1474 CRVYSNMIIGLLAADQLFQLCPEQSGYYVLLSNIYAKAGRWEDVTTVRSIMKTKGIKKMP 1533

Query: 728  GCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKV 787
            G S  E DN+VH F  G+ SHP++ +IY ELD L  K+KE GY+P+T+  LH++EEE K 
Sbjct: 1534 GVSNFELDNRVHTFLAGDQSHPQSKQIYEELDVLVGKMKEAGYVPETDSALHDVEEEDKE 1593

Query: 788  QYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRF 847
             +L  HSEK+A+AF +++T+   PIR+ KNLRVCGDCH A K IS + GREI +RD+NRF
Sbjct: 1594 CHLAVHSEKLAIAFAILNTAPGSPIRITKNLRVCGDCHIAAKLISKIVGREITIRDTNRF 1653

Query: 848  HHIKDGKCSCNDYW 861
            HH  +G CSC DYW
Sbjct: 1654 HHFYNGVCSCGDYW 1667



 Score =  160 bits (405), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 180/356 (50%), Gaps = 48/356 (13%)

Query: 53   HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
            ++N+     A+     M   G  PD  TY  +LK+   S +  +G  +H+ + R  L+ N
Sbjct: 1101 YVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASSGSEDLWVGMQIHAAVVRVGLDLN 1160

Query: 113  SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
              + N LIS+Y KCG L EA ++   M   RD+VSW+S+++     G+  DA+ +  EM 
Sbjct: 1161 VFVGNGLISMYGKCGCLVEACRVLDZMPC-RDVVSWNSLVAGCARNGQFDDALEVCKEME 1219

Query: 173  ELGFCPNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
             LG  P+    ++++ A +NT  +NV+                            FVK  
Sbjct: 1220 LLGLKPDAGTMASLLPAVTNTCLDNVS----------------------------FVK-- 1249

Query: 231  VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
                   ++F K+  K+ V W +MI        P +A+ +FL M      PD  +++ V+
Sbjct: 1250 -------EMFMKLANKSLVSWNVMIAVYMNNSMPAEAVDIFLQMEDHAVDPDAISIASVL 1302

Query: 291  SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
             AC +L     G+++H + +R  L  ++ +  +L+DMYAKC   G ++ +R+VFD+M   
Sbjct: 1303 PACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDMYAKC---GCLEYAREVFDQMKFR 1359

Query: 351  NVMSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLD 403
            +V+SWT++I+ Y  +G GRD  AV LFS M    + P+   F SVL AC +  LLD
Sbjct: 1360 DVVSWTSMISAYGMNGKGRD--AVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLD 1413



 Score =  124 bits (310), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 172/399 (43%), Gaps = 72/399 (18%)

Query: 235  SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
            S   +FD++ +KN V + +MI          DA+ +F +M   G  PD +T   V+ A S
Sbjct: 1078 STRHIFDEIPKKNVVFFNVMIRSYVNNHLYSDALLVFKNMAGHGIDPDHYTYPCVLKASS 1137

Query: 295  ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK------------------------ 330
              E    G Q+H+  +R GL L+V VG  L+ MY K                        
Sbjct: 1138 GSEDLWVGMQIHAAVVRVGLDLNVFVGNGLISMYGKCGCLVEACRVLDZMPCRDVVSWNS 1197

Query: 331  ----CTVDGSVDDS-------------------------------------RKVFDRMLD 349
                C  +G  DD+                                     +++F ++ +
Sbjct: 1198 LVAGCARNGQFDDALEVCKEMELLGLKPDAGTMASLLPAVTNTCLDNVSFVKEMFMKLAN 1257

Query: 350  HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
             +++SW  +I  Y+ +     EAV +F  M    V P+  + ASVL ACG+L    +  +
Sbjct: 1258 KSLVSWNVMIAVYM-NNSMPAEAVDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRR 1316

Query: 410  VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
            ++ + V++    +  + N+LI MYA+ G +E AR+ F+ +  +++VS+ +M+ AY  N  
Sbjct: 1317 IHEYVVRKRLQPNLLLENALIDMYAKCGCLEYAREVFDQMKFRDVVSWTSMISAYGMNGK 1376

Query: 470  SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGE---QIHARIIKSGFESNHCI 526
               A  L   ++D G+   +  F S+LS  S  G + +G    ++     K      H +
Sbjct: 1377 GRDAVSLFSRMQDLGLNPDSIAFVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFV 1436

Query: 527  YNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITG 564
               ++ +  R   V+ A+   K+M  + N   W ++++ 
Sbjct: 1437 --CMVDLLGRAGQVDEAYGFIKQMPMEPNERVWGALLSA 1473



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 112/224 (50%), Gaps = 18/224 (8%)

Query: 66   LDLMTQKGNH---PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
            +D+  Q  +H   PD  + + +L +C       LG+ +H  + R +L+PN ++ N+LI +
Sbjct: 1280 VDIFLQMEDHAVDPDAISIASVLPACGDLSALLLGRRIHEYVVRKRLQPNLLLENALIDM 1339

Query: 123  YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
            Y+KCG L  A ++F  M   RD+VSW+SMIS+Y   GK  DA+ +F  M +LG  P+   
Sbjct: 1340 YAKCGCLEYAREVFDQM-KFRDVVSWTSMISAYGMNGKGRDAVSLFSRMQDLGLNPDSIA 1398

Query: 183  FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
            F +V+ ACS+   +  G   +  + +       +     ++D+  + G VD   AY    
Sbjct: 1399 FVSVLSACSHAGLLDEGRYYFKLMTEECKIVPRIEHFVCMVDLLGRAGQVD--EAYGFIK 1456

Query: 242  KMT-EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
            +M  E N   W  +++ C          R++ +MI+     D+ 
Sbjct: 1457 QMPMEPNERVWGALLSAC----------RVYSNMIIGLLAADQL 1490


>gi|357502521|ref|XP_003621549.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|87241485|gb|ABD33343.1| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355496564|gb|AES77767.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 654

 Score =  427 bits (1097), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/587 (37%), Positives = 343/587 (58%), Gaps = 10/587 (1%)

Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
           P + T   ++++C E    + G  +H   + +GL  D  +   L++MY  C + GSVD +
Sbjct: 72  PTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMY--CDL-GSVDHA 128

Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG- 399
            KVFD   +  +  W AI      +  R ++ + L+  M    +  N FT+  VLKAC  
Sbjct: 129 CKVFDETREKTIFVWNAIFRALAMAS-RGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVV 187

Query: 400 ---NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
              ++      ++++ H ++ G      V  +L+ +YAR G +  A   F ++ +KN+VS
Sbjct: 188 SELSICPLRKGKEIHAHILRHGYEGHVHVMTTLLDVYARFGYVSYASSVFGAMPDKNIVS 247

Query: 457 YNTMVDAYAKNLNSEKAFELLH--EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHAR 514
           ++ M+  YAKN    KA EL     +E      +  T  S+L   +S+ A+  G+ +HA 
Sbjct: 248 WSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAY 307

Query: 515 IIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARA 574
           +++ G +S   + N LI+MY RC  +    +VF  M+ R+VISW S+I+ +  HG   +A
Sbjct: 308 VLRRGLDSTLPVLNTLITMYGRCGEISTGQRVFDYMKKRDVISWNSLISIYGMHGLGKKA 367

Query: 575 LEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVD 634
           ++IF  M+  G+ P+ IT+I VL ACSHAGL+ E    F SM +++ I  RMEHYACMVD
Sbjct: 368 IQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHYACMVD 427

Query: 635 LLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAA 694
           +LGR+  L EA+E I++M       VW + LG+CR+H + EL + A+ M+ E +P++   
Sbjct: 428 ILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEPKNAGN 487

Query: 695 HILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEI 754
           ++LLS++YA +  W  V  +RK+++ R L K   CSWIE   K++     E  +P+  E+
Sbjct: 488 YVLLSHIYAKSRMWNDVRRVRKQLESRGLQKIPSCSWIEVKRKIYSLVSIEEYNPQIEEL 547

Query: 755 YAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRV 814
            A L  L  +IK  GY+P TN V ++L+EE+K + +  HS K+AVAFGLI+TSK + IR+
Sbjct: 548 CAFLITLLTEIKNQGYVPQTNVVTYDLDEEEKERIVLGHSGKLAVAFGLINTSKGEIIRI 607

Query: 815 FKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
             NLR+C DCH  +K++S  T REI+LRD NRFH  KDG CSC DYW
Sbjct: 608 SNNLRLCEDCHAFMKFVSKFTNREILLRDVNRFHCFKDGVCSCGDYW 654



 Score =  151 bits (381), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 215/425 (50%), Gaps = 20/425 (4%)

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
           +P   T+ LL+ SCI   +   G  VH  L  S L+ +  +   LI++Y   G ++ A K
Sbjct: 71  NPTKKTFELLINSCIEQNSLSDGVDVHHRLVGSGLDQDPYLATKLINMYCDLGSVDHACK 130

Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
           +F     ++ I  W+++  +     +  D + ++ +M  +G   N + ++ V++AC  +E
Sbjct: 131 VFDET-REKTIFVWNAIFRALAMASRGEDLLVLYGQMNWIGIPSNRFTYTYVLKACVVSE 189

Query: 195 ----NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTV 249
                +  G  I+  +L+ GY +  V V   L+D++ + G V   S+  VF  M +KN V
Sbjct: 190 LSICPLRKGKEIHAHILRHGY-EGHVHVMTTLLDVYARFGYVSYASS--VFGAMPDKNIV 246

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELELFTSGKQLHS 307
            W+ MI    +   P  A+ LF  M+L     +P+  T+  V+ AC+ L     GK +H+
Sbjct: 247 SWSAMIACYAKNEMPMKALELFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHA 306

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           + +R GL   + V  +L+ MY +C   G +   ++VFD M   +V+SW ++I+ Y    G
Sbjct: 307 YVLRRGLDSTLPVLNTLITMYGRC---GEISTGQRVFDYMKKRDVISWNSLISIYGMH-G 362

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             K+A+++F +MI   V+P++ TF +VL AC +      A+ ++   + + R        
Sbjct: 363 LGKKAIQIFENMINRGVSPSYITFITVLCACSHAGLVEEAKILFESMLNKYRIHPRMEHY 422

Query: 428 S-LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLN---SEKAFELLHEIED 482
           + ++ +  R+ R+++A +  +++ F+     + +++ +   + N   +E+A  +L E+E 
Sbjct: 423 ACMVDILGRANRLDEAIELIQNMDFKPGPTVWGSLLGSCRIHCNVELAERASAMLFELEP 482

Query: 483 TGVGT 487
              G 
Sbjct: 483 KNAGN 487



 Score = 80.9 bits (198), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 1/145 (0%)

Query: 63  IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
           +F + ++      P+  T   +L++C        GKLVH+ + R  L+    +LN+LI++
Sbjct: 267 LFQIMMLEACDTVPNPITMVSVLQACASLAALEHGKLVHAYVLRRGLDSTLPVLNTLITM 326

Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC 182
           Y +CG+++   ++F  M  KRD++SW+S+IS Y   G    AI +F  M+  G  P+   
Sbjct: 327 YGRCGEISTGQRVFDYM-KKRDVISWNSLISIYGMHGLGKKAIQIFENMINRGVSPSYIT 385

Query: 183 FSAVIRACSNTENVAIGHIIYGFLL 207
           F  V+ ACS+   V    I++  +L
Sbjct: 386 FITVLCACSHAGLVEEAKILFESML 410


>gi|224125332|ref|XP_002329779.1| predicted protein [Populus trichocarpa]
 gi|222870841|gb|EEF07972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/559 (38%), Positives = 358/559 (64%), Gaps = 4/559 (0%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+  I +G      +   L+++   C   GS+  +R++F  + + +   +T++I    
Sbjct: 30  QVHAHIIVSGYGRSRSLLTKLLNL--ACAA-GSISYTRQIFLAVPNPDSFLFTSLIKSTS 86

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           +S      ++  +S M+   V+P+++TF SV+K+C +L        V+ H +  G  LD 
Sbjct: 87  KSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSALKHGRVVHGHVLVHGFGLDV 146

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
            V  +L+++Y + G + +ARK F+ + E+++V++N+M+  Y +N  +++A  L   +++T
Sbjct: 147 YVQAALVALYGKCGDLINARKVFDKIRERSIVAWNSMISGYEQNGFAKEAIGLFDRMKET 206

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
           GV   + TF S+LS  + +GA   G  +H  I+ +G + N  +  +LI+MY RC NV  A
Sbjct: 207 GVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVVLGTSLINMYIRCGNVSKA 266

Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHA 603
            +VF  M++RNV++WT+MI+G+  +G+ ++A+E+F++M  +G+ PN IT++AVLSAC+HA
Sbjct: 267 REVFDSMKERNVVAWTAMISGYGTNGYGSQAVELFHEMRRNGLFPNSITFVAVLSACAHA 326

Query: 604 GLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR-SMPLSADVLVWR 662
           GL++EG + F S+ +E+ +V  +EH  C+VD+LGR+G L EA  FI+  +P +    +  
Sbjct: 327 GLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGLLDEAYNFIKEEIPENPAPAILT 386

Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
             LGAC++H + +LG   AE +L  +P++PA +++LSN+YA AG  + V  +R  M  + 
Sbjct: 387 AMLGACKMHKNFDLGAQVAEHLLAAEPENPAHYVILSNIYALAGRMDQVEIVRNNMIRKC 446

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE 782
           L K+ G S +E D K + F +G+ SH +T  IY  LD+L  K  E GY+P ++ V+HELE
Sbjct: 447 LKKQVGYSTVEVDQKTYLFSMGDKSHSETNAIYHYLDELMWKCSEAGYVPVSDSVMHELE 506

Query: 783 EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLR 842
           EE++   L  HSEK+A+AFGL+ TS   PIR+ KNLR+C DCH+AIK+IS ++ REI++R
Sbjct: 507 EEEREYALRYHSEKLAIAFGLLKTSHGTPIRIVKNLRMCEDCHSAIKFISAISSREIIVR 566

Query: 843 DSNRFHHIKDGKCSCNDYW 861
           D  RFHH K G CSC DYW
Sbjct: 567 DKLRFHHFKVGSCSCLDYW 585



 Score =  176 bits (447), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 114/368 (30%), Positives = 199/368 (54%), Gaps = 10/368 (2%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P    Y+ LL++  R    +L   VH+ +  S    +  +L  L++L    G ++   +I
Sbjct: 10  PHSPAYNFLLQAGPR---LYLLHQVHAHIIVSGYGRSRSLLTKLLNLACAAGSISYTRQI 66

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F ++ N    +  S + S+  +    + +++ +  M+     P+ Y F++VI++C++   
Sbjct: 67  FLAVPNPDSFLFTSLIKSTSKSHNFSIYSLYFYSRMVLSNVSPSNYTFTSVIKSCADLSA 126

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G +++G +L  G F  DV V  AL+ ++ K   DL +A KVFDK+ E++ V W  MI
Sbjct: 127 LKHGRVVHGHVLVHG-FGLDVYVQAALVALYGKCG-DLINARKVFDKIRERSIVAWNSMI 184

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +   Q G  ++AI LF  M  +G  PD  T   V+SAC+ L  F+ G  +H + +  GL 
Sbjct: 185 SGYEQNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLD 244

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           L+V +G SL++MY +C   G+V  +R+VFD M + NV++WTA+I+GY  + G   +AV+L
Sbjct: 245 LNVVLGTSLINMYIRC---GNVSKAREVFDSMKERNVVAWTAMISGY-GTNGYGSQAVEL 300

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN-SLISMYA 434
           F +M +  + PN  TF +VL AC +    N   +++    +    +     N  L+ M  
Sbjct: 301 FHEMRRNGLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLG 360

Query: 435 RSGRMEDA 442
           R+G +++A
Sbjct: 361 RAGLLDEA 368



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 59/193 (30%), Positives = 101/193 (52%), Gaps = 2/193 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G  ++AI   D M + G  PD  T+  +L +C     F LG  VH  +  + L+ N V
Sbjct: 189 QNGFAKEAIGLFDRMKETGVEPDSATFVSVLSACAHLGAFSLGCWVHEYIVGNGLDLNVV 248

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +  SLI++Y +CG++++A ++F SM  +R++V+W++MIS Y   G    A+ +F EM   
Sbjct: 249 LGTSLINMYIRCGNVSKAREVFDSM-KERNVVAWTAMISGYGTNGYGSQAVELFHEMRRN 307

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G  PN   F AV+ AC++   V  G  ++  + +  +    V     L+DM  +  + L+
Sbjct: 308 GLFPNSITFVAVLSACAHAGLVNEGRRLFASIREEYHLVPGVEHNVCLVDMLGRAGL-LD 366

Query: 235 SAYKVFDKMTEKN 247
            AY    +   +N
Sbjct: 367 EAYNFIKEEIPEN 379


>gi|115468242|ref|NP_001057720.1| Os06g0506100 [Oryza sativa Japonica Group]
 gi|52075894|dbj|BAD45840.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113595760|dbj|BAF19634.1| Os06g0506100 [Oryza sativa Japonica Group]
          Length = 766

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 232/701 (33%), Positives = 404/701 (57%), Gaps = 16/701 (2%)

Query: 81  YSLLLKSCIRSRNFHLGKLVHSLLTRS-------KLEPNSVILNSLISLYSKCGDLNEAN 133
           Y+ L+ +C R R+   G+ VH  L  S       +L  N+V+ N LI++Y +C   + A 
Sbjct: 47  YAALVSACSRLRSLPQGRRVHRHLVASSSSSPDAQLAGNTVLGNHLITMYGRCAAPDSAR 106

Query: 134 KIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNT 193
           ++F  M   R+ VSW+S+I+++V  G+  DA+ +F  ML  G   +++   + +RAC+  
Sbjct: 107 QVFDEM-PARNPVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVRACTEL 165

Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
            +V  G  ++   LK     SD+ V  AL+ M+ K  + ++  + +F+++ +K+ + W  
Sbjct: 166 GDVGTGRQVHAHALKSER-GSDLIVQNALVTMYSKNGL-VDDGFMLFERIKDKDLISWGS 223

Query: 254 MITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
           +I    Q G   +A+++F +MI+ G   P+ F       AC  +  +  G+Q+H  +I+ 
Sbjct: 224 IIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGLSIKY 283

Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
            L  D+ VGCSL DMYA+C    ++D +R  F R+   +++SW +I+  Y   G    EA
Sbjct: 284 RLDRDLYVGCSLSDMYARCK---NLDSARVAFYRIEAPDLVSWNSIVNAYSVEG-LLSEA 339

Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
           + LFS+M    + P+  T   +L AC           ++++ VK G   D  V NSL+SM
Sbjct: 340 LVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLLSM 399

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           YAR   +  A   F  + ++++V++N+++ A A++ + E+  +L   +  +       + 
Sbjct: 400 YARCSDLSSAMDVFHEIKDQDVVTWNSILTACAQHNHPEEVLKLFSLLNKSEPSLDRISL 459

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM-E 551
            ++LS ++ +G     +Q+HA   K+G   +  + N LI  Y++C +++ A ++F+ M  
Sbjct: 460 NNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRLFEIMGN 519

Query: 552 DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK 611
           +R+V SW+S+I G+A+ G+A  A ++F +M + GI+PN +T+I VL+ACS  G ++EG  
Sbjct: 520 NRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGFVNEGCY 579

Query: 612 HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH 671
           ++  M  E+GIV   EH +C+VDLL R+G LTEA  FI  MP   D+++W+T L A ++H
Sbjct: 580 YYSIMEPEYGIVPTREHCSCIVDLLARAGKLTEAANFIDQMPFEPDIIMWKTLLAASKMH 639

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            D E+GK AAE IL  DP   AA++LL N+YA++G+W   A ++K M+   + K  G SW
Sbjct: 640 NDMEMGKRAAEGILNIDPSHSAAYVLLCNIYAASGNWNEFARLKKAMRTSGVKKSPGKSW 699

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           ++   ++  F V + SHP++ EIYA L+ + +++ + GY+P
Sbjct: 700 VKLKGELKVFIVEDRSHPESEEIYAMLELIGMEMIKAGYVP 740



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 146/549 (26%), Positives = 286/549 (52%), Gaps = 20/549 (3%)

Query: 29  PPSSSPPFIAQPTTSEPLS--NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLK 86
           P S+   F   P  + P+S  + +  H+ +GR   A+     M + G   D       ++
Sbjct: 102 PDSARQVFDEMPARN-PVSWASVIAAHVQNGRAGDALGLFSSMLRSGTAADQFALGSAVR 160

Query: 87  SCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIV 146
           +C    +   G+ VH+   +S+   + ++ N+L+++YSK G +++   +F+ + +K D++
Sbjct: 161 ACTELGDVGTGRQVHAHALKSERGSDLIVQNALVTMYSKNGLVDDGFMLFERIKDK-DLI 219

Query: 147 SWSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
           SW S+I+ +  +G +++A+ +F EM+ E    PNE+ F +  RAC    +   G  I+G 
Sbjct: 220 SWGSIIAGFAQQGFEMEALQVFREMIVEGSHHPNEFHFGSAFRACGAVGSWEYGEQIHGL 279

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
            +K    D D+ VGC+L DM+ +   +L+SA   F ++   + V W  ++   +  G   
Sbjct: 280 SIKY-RLDRDLYVGCSLSDMYARCK-NLDSARVAFYRIEAPDLVSWNSIVNAYSVEGLLS 337

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           +A+ LF +M  SG  PD  T+ G++ AC   +    G+ +HS+ ++ GL  DV V  SL+
Sbjct: 338 EALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSVCNSLL 397

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
            MYA+C+   S  D   VF  + D +V++W +I+T   Q     +E +KLFS + + + +
Sbjct: 398 SMYARCSDLSSAMD---VFHEIKDQDVVTWNSILTACAQH-NHPEEVLKLFSLLNKSEPS 453

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
            +  +  +VL A   L    + +QV+ +A K G   D  + N+LI  YA+ G ++DA + 
Sbjct: 454 LDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVDDRMLSNTLIDTYAKCGSLDDAMRL 513

Query: 446 FESLF-EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
           FE +   +++ S+++++  YA+   +++AF+L   +   G+  +  TF  +L+  S +G 
Sbjct: 514 FEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTACSRVGF 573

Query: 505 IGKGEQIHARIIKSGF----ESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWT 559
           + +G   ++ I++  +       HC  + ++ + +R   +  A     +M  + ++I W 
Sbjct: 574 VNEGCYYYS-IMEPEYGIVPTREHC--SCIVDLLARAGKLTEAANFIDQMPFEPDIIMWK 630

Query: 560 SMITGFAKH 568
           +++     H
Sbjct: 631 TLLAASKMH 639



 Score = 99.0 bits (245), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 156/334 (46%), Gaps = 22/334 (6%)

Query: 56  DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
           +G + +A+     M   G  PD  T   LL +C+     + G+L+HS L +  L+ +  +
Sbjct: 333 EGLLSEALVLFSEMRDSGLRPDGITVRGLLCACVGRDALYHGRLIHSYLVKLGLDGDVSV 392

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            NSL+S+Y++C DL+ A  +F  + ++ D+V+W+S++++        + + +F  + +  
Sbjct: 393 CNSLLSMYARCSDLSSAMDVFHEIKDQ-DVVTWNSILTACAQHNHPEEVLKLFSLLNKSE 451

Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLE 234
              +    + V+ A +      +   ++ +  K G  D D  +   LID + K GS+D  
Sbjct: 452 PSLDRISLNNVLSASAELGYFEMVKQVHAYAFKAGLVD-DRMLSNTLIDTYAKCGSLD-- 508

Query: 235 SAYKVFDKM-TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSAC 293
            A ++F+ M   ++   W+ +I    Q G  ++A  LF  M   G  P+  T  GV++AC
Sbjct: 509 DAMRLFEIMGNNRDVFSWSSLIVGYAQFGYAKEAFDLFSRMRSLGIRPNHVTFIGVLTAC 568

Query: 294 SELELFTSGKQLHSWAIRTGLALDVCVGCS-LVDMYAKCTVDGSVDDSRKVFDRM-LDHN 351
           S +     G   +S        +     CS +VD+ A+    G + ++    D+M  + +
Sbjct: 569 SRVGFVNEGCYYYSIMEPEYGIVPTREHCSCIVDLLARA---GKLTEAANFIDQMPFEPD 625

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           ++ W  ++            A K+ +DM  G+ A
Sbjct: 626 IIMWKTLLA-----------ASKMHNDMEMGKRA 648


>gi|449456661|ref|XP_004146067.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22150,
           chloroplastic-like [Cucumis sativus]
          Length = 793

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 253/763 (33%), Positives = 428/763 (56%), Gaps = 36/763 (4%)

Query: 36  FIAQPTTSEPLSNRLIYHL--NDGRVQKAIFTLDLMTQKGNHP----DLDTYSLLLKSCI 89
           F A P  S  L N +I  L  N+   +  +F  ++   K + P    D  TYS +LK+C 
Sbjct: 27  FDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNM---KSSSPQVKCDSYTYSSVLKACA 83

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNE-------------ANKIF 136
            +RN  +GK VH+   R  + P+ ++ NSL+++YS C                    K+F
Sbjct: 84  DTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCDLVRKVF 143

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
            +M  KR +V+W+++I+ YV   +  +A+  F  M+++G  P+   F  V  A S+  + 
Sbjct: 144 DTM-RKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAFSSLGDF 202

Query: 197 AIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
              ++++G L+K G  + +D+ V  + I M+ +    LE A KVFD   E+NT  W  MI
Sbjct: 203 KNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGC-LEFAKKVFDNCLERNTEVWNTMI 261

Query: 256 TRCTQLGCPRDAIRLFLDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           +   Q     + I+LF   + S     D  TL   +SA S L+ F   +QLH++ I+   
Sbjct: 262 SAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFVIKNVA 321

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
              VCV  +L+ MY++C    S+D S K+FD M + +V+SW  +I+ +VQ+G  D EA+ 
Sbjct: 322 VTQVCVMNALIAMYSRCN---SIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLND-EALM 377

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
           LF +M +  +  +  T  ++L A  +L + ++ +Q + + ++ G   +  + + LI MYA
Sbjct: 378 LFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEG-MDSYLIDMYA 436

Query: 435 RSGRMEDARKAFESLF--EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           +SG +E A+  FE  F  E++  ++N+M+  Y +N   ++AF +L ++ D  V  +  T 
Sbjct: 437 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 496

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
           AS+L   +  G I  G+Q+H   I++  + N  +  ALI MYS+  ++  A  VF +  +
Sbjct: 497 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANE 556

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           ++++++++MI G+ +HG    AL +F++M   GI+P+ +T +AVLSACS+AGL+ EG + 
Sbjct: 557 KSIVTYSTMILGYGQHGMGESALFMFHRMQKSGIQPDAVTLVAVLSACSYAGLVDEGLQI 616

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL-VWRTFLGACRVH 671
           F SM   + I    EH+ C+ D+LGR+G + +A EF+  +    +V+ +W + L ACR+H
Sbjct: 617 FESMRTVYNIQPSTEHFCCVADMLGRAGRVDKAYEFVIGLGEKGNVMEIWGSLLAACRIH 676

Query: 672 GDTELGKHAAEMILEQDPQD--PAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGC 729
              ELGK  A+ +LE +  +     H+LLSN+YA   +WE V  +RK+M+ER L KE G 
Sbjct: 677 KQFELGKLVAKKLLEMEKINGKTGYHVLLSNIYAEERNWENVDIVRKQMRERGLKKETGS 736

Query: 730 SWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
           SWIE    ++ F   +  HP++ +IY+ L++L +++K  GY P
Sbjct: 737 SWIEIAGYMNHFASKDRKHPQSDQIYSMLEELLMEMKHAGYRP 779



 Score =  201 bits (510), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 152/544 (27%), Positives = 262/544 (48%), Gaps = 55/544 (10%)

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP----DRFTLSG 288
           L  A ++FD +   +TV W  +I        P +A+  + +M  S   P    D +T S 
Sbjct: 20  LHLARQLFDALPRPSTVLWNTIIIGLVCNNFPDEALLFYSNMKSSS--PQVKCDSYTYSS 77

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKC---TVDGSV-------D 338
           V+ AC++      GK +H+  +R  +     V  SL++MY+ C   T DG +       D
Sbjct: 78  VLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCSSTTPDGKMVSGYSRCD 137

Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
             RKVFD M    V++W  +I  YV++  R  EAVK FS M++  + P+  +F +V  A 
Sbjct: 138 LVRKVFDTMRKRTVVAWNTLIAWYVRT-ERYAEAVKQFSMMMKIGIKPSPVSFVNVFPAF 196

Query: 399 GNLLDSNVAEQVYTHAVKRGRAL--DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
            +L D   A  V+   VK G     D  V +S I MYA  G +E A+K F++  E+N   
Sbjct: 197 SSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEFAKKVFDNCLERNTEV 256

Query: 457 YNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
           +NTM+ A+ +N  S +  +L  + +E         T  S +S AS +      EQ+HA +
Sbjct: 257 WNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAASHLQKFELAEQLHAFV 316

Query: 516 IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARAL 575
           IK+   +  C+ NALI+MYSRC +++ +F++F  M +++V+SW +MI+ F ++G    AL
Sbjct: 317 IKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMPEKDVVSWNTMISAFVQNGLNDEAL 376

Query: 576 EIFYKMLADGIKPNGITYIAVLSACS-----------HAGLISEGWK------HFRSMYD 618
            +FY+M    +  + +T  A+LSA S           H  L+  G +      +   MY 
Sbjct: 377 MLFYEMKKQDLMVDSVTVTALLSAASDLRNPDIGKQTHGYLLRNGIQFEGMDSYLIDMYA 436

Query: 619 EHGIVQRMEH--------------YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVW 661
           + G+++  ++              +  M+    ++G + +A   +R M    +  +V+  
Sbjct: 437 KSGLIEAAQNVFEKSFSHERDQATWNSMMSGYTQNGLVDQAFLILRQMLDQKVMPNVVTL 496

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQD-PQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
            + L AC   G  + GK      +  D  Q+      L ++Y+ +G   +  N+  +  E
Sbjct: 497 ASILPACNPSGYIDWGKQLHGFSIRNDLDQNVFVATALIDMYSKSGSIAHAENVFSKANE 556

Query: 721 RNLI 724
           ++++
Sbjct: 557 KSIV 560



 Score =  115 bits (289), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 93/390 (23%), Positives = 187/390 (47%), Gaps = 24/390 (6%)

Query: 320 VGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDM 379
           +  +LV    +   +G +  +R++FD +   + + W  II G V +   D EA+  +S+M
Sbjct: 3   ISINLVHELCRLCQEGQLHLARQLFDALPRPSTVLWNTIIIGLVCNNFPD-EALLFYSNM 61

Query: 380 IQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR-- 435
                QV  + +T++SVLKAC +  +  V + V+ H ++        V NSL++MY+   
Sbjct: 62  KSSSPQVKCDSYTYSSVLKACADTRNLVVGKAVHAHFLRCLMNPSRIVYNSLLNMYSMCS 121

Query: 436 ---------SG--RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
                    SG  R +  RK F+++ ++ +V++NT++  Y +     +A +    +   G
Sbjct: 122 STTPDGKMVSGYSRCDLVRKVFDTMRKRTVVAWNTLIAWYVRTERYAEAVKQFSMMMKIG 181

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY--NALISMYSRCANVEA 542
           +  S  +F ++    SS+G       +H  ++K G E  + +Y  ++ I MY+    +E 
Sbjct: 182 IKPSPVSFVNVFPAFSSLGDFKNANVVHGMLVKLGSEYVNDLYVVSSAIFMYAELGCLEF 241

Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML-ADGIKPNGITYIAVLSACS 601
           A +VF    +RN   W +MI+ F ++ F+   +++F++ + ++    + +T ++ +SA S
Sbjct: 242 AKKVFDNCLERNTEVWNTMISAFVQNNFSLEGIQLFFQAVESEDAAIDEVTLLSAISAAS 301

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           H     E  +   +   ++  V ++     ++ +  R  S+  + +   +MP   DV+ W
Sbjct: 302 HLQKF-ELAEQLHAFVIKNVAVTQVCVMNALIAMYSRCNSIDTSFKIFDNMP-EKDVVSW 359

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQD 691
            T + A   +G   L   A  +  E   QD
Sbjct: 360 NTMISAFVQNG---LNDEALMLFYEMKKQD 386


>gi|15232006|ref|NP_187516.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207468|sp|Q9SS83.1|PP220_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g09040,
            mitochondrial; Flags: Precursor
 gi|5923669|gb|AAD56320.1|AC009326_7 hypothetical protein [Arabidopsis thaliana]
 gi|332641192|gb|AEE74713.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1028

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 238/672 (35%), Positives = 391/672 (58%), Gaps = 11/672 (1%)

Query: 93   NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
            N  LG +VH+   +  L  N  + +SL+S+YSKC  +  A K+F+++  K D+  W++MI
Sbjct: 342  NLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF-WNAMI 400

Query: 153  SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
              Y + G+    + +F++M   G+  +++ F++++  C+ + ++ +G   +  ++K    
Sbjct: 401  RGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIK-KKL 459

Query: 213  DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
              ++ VG AL+DM+ K    LE A ++F++M +++ V W  +I    Q     +A  LF 
Sbjct: 460  AKNLFVGNALVDMYAKCGA-LEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFK 518

Query: 273  DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
             M L G + D   L+  + AC+ +     GKQ+H  +++ GL  D+  G SL+DMY+KC 
Sbjct: 519  RMNLCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKC- 577

Query: 333  VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFA 392
              G + D+RKVF  + + +V+S  A+I GY Q+    +EAV LF +M+   V P+  TFA
Sbjct: 578  --GIIKDARKVFSSLPEWSVVSMNALIAGYSQNNL--EEAVVLFQEMLTRGVNPSEITFA 633

Query: 393  SVLKACGNLLDSNVAEQVYTHAVKRGRALD-DCVGNSLISMYARSGRMEDARKAFESLFE 451
            ++++AC       +  Q +    KRG + + + +G SL+ MY  S  M +A   F  L  
Sbjct: 634  TIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSRGMTEACALFSELSS 693

Query: 452  -KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
             K++V +  M+  +++N   E+A +   E+   GV     TF ++L   S + ++ +G  
Sbjct: 694  PKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRA 753

Query: 511  IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHG 569
            IH+ I     + +    N LI MY++C +++ + QVF EM  R NV+SW S+I G+AK+G
Sbjct: 754  IHSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNG 813

Query: 570  FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY 629
            +A  AL+IF  M    I P+ IT++ VL+ACSHAG +S+G K F  M  ++GI  R++H 
Sbjct: 814  YAEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHV 873

Query: 630  ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP 689
            ACMVDLLGR G L EA +FI +  L  D  +W + LGACR+HGD   G+ +AE ++E +P
Sbjct: 874  ACMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRGEISAEKLIELEP 933

Query: 690  QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
            Q+ +A++LLSN+YAS G WE    +RK M++R + K  G SWI+ + + H F  G+ SH 
Sbjct: 934  QNSSAYVLLSNIYASQGCWEKANALRKVMRDRGVKKVPGYSWIDVEQRTHIFAAGDKSHS 993

Query: 750  KTLEIYAELDQL 761
            +  +I   L+ L
Sbjct: 994  EIGKIEMFLEDL 1005



 Score =  270 bits (690), Expect = 2e-69,   Method: Compositional matrix adjust.
 Identities = 177/573 (30%), Positives = 298/573 (52%), Gaps = 23/573 (4%)

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           P+ +   ++I+ Y + G L +A  +F  M +  D+V+W+ MIS +  RG +  AI  F  
Sbjct: 259 PDHLAFVTVINTYIRLGKLKDARLLFGEMSSP-DVVAWNVMISGHGKRGCETVAIEYFFN 317

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           M +           +V+ A     N+ +G +++   +K G   S++ VG +L+ M+ K  
Sbjct: 318 MRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLG-LASNIYVGSSLVSMYSKCE 376

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             +E+A KVF+ + EKN V W  MI      G     + LF+DM  SG+  D FT + ++
Sbjct: 377 -KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLL 435

Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
           S C+       G Q HS  I+  LA ++ VG +LVDMYAKC   G+++D+R++F+RM D 
Sbjct: 436 STCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAKC---GALEDARQIFERMCDR 492

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           + ++W  II  YVQ    + EA  LF  M    +  +    AS LKAC ++      +QV
Sbjct: 493 DNVTWNTIIGSYVQD-ENESEAFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQGKQV 551

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
           +  +VK G   D   G+SLI MY++ G ++DARK F SL E ++VS N ++  Y++N N 
Sbjct: 552 HCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSVVSMNALIAGYSQN-NL 610

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES-NHCIYNA 529
           E+A  L  E+   GV  S  TFA+++       ++  G Q H +I K GF S    +  +
Sbjct: 611 EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLGTQFHGQITKRGFSSEGEYLGIS 670

Query: 530 LISMYSRCANVEAAFQVFKEMED-RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           L+ MY     +  A  +F E+   ++++ WT M++G +++GF   AL+ + +M  DG+ P
Sbjct: 671 LLGMYMNSRGMTEACALFSELSSPKSIVLWTGMMSGHSQNGFYEEALKFYKEMRHDGVLP 730

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEH------YACMVDLLGRSGSL 642
           +  T++ VL  CS    + EG    R++   H ++  + H         ++D+  + G +
Sbjct: 731 DQATFVTVLRVCSVLSSLREG----RAI---HSLIFHLAHDLDELTSNTLIDMYAKCGDM 783

Query: 643 TEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
             + +    M   ++V+ W + +     +G  E
Sbjct: 784 KGSSQVFDEMRRRSNVVSWNSLINGYAKNGYAE 816



 Score =  253 bits (645), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 165/589 (28%), Positives = 295/589 (50%), Gaps = 49/589 (8%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P+  T+S++L +C R  N   G+ +H  + +  LE NS    +L+ +Y+KC  +++A ++
Sbjct: 158 PNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERNSYCGGALVDMYAKCDRISDARRV 217

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F+ + +  + V W+ + S YV  G   +A+ +F  M + G  P+   F  VI    NT  
Sbjct: 218 FEWIVDP-NTVCWTCLFSGYVKAGLPEEAVLVFERMRDEGHRPDHLAFVTVI----NT-- 270

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
               +I  G                            L+ A  +F +M+  + V W +MI
Sbjct: 271 ----YIRLG---------------------------KLKDARLLFGEMSSPDVVAWNVMI 299

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +   + GC   AI  F +M  S     R TL  V+SA   +     G  +H+ AI+ GLA
Sbjct: 300 SGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLSAIGIVANLDLGLVVHAEAIKLGLA 359

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            ++ VG SLV MY+KC     ++ + KVF+ + + N + W A+I GY  +G   K  ++L
Sbjct: 360 SNIYVGSSLVSMYSKCE---KMEAAAKVFEALEEKNDVFWNAMIRGYAHNGESHK-VMEL 415

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F DM       + FTF S+L  C    D  +  Q ++  +K+  A +  VGN+L+ MYA+
Sbjct: 416 FMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKNLFVGNALVDMYAK 475

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +EDAR+ FE + +++ V++NT++ +Y ++ N  +AF+L   +   G+ +     AS 
Sbjct: 476 CGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESEAFDLFKRMNLCGIVSDGACLAST 535

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           L   + +  + +G+Q+H   +K G + +    ++LI MYS+C  ++ A +VF  + + +V
Sbjct: 536 LKACTHVHGLYQGKQVHCLSVKCGLDRDLHTGSSLIDMYSKCGIIKDARKVFSSLPEWSV 595

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +S  ++I G++++     A+ +F +ML  G+ P+ IT+  ++ AC     ++ G   F  
Sbjct: 596 VSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEACHKPESLTLG-TQFHG 653

Query: 616 MYDEHGIVQRMEHYACMVDLLG---RSGSLTEALEFIRSMPLSADVLVW 661
              + G     E+    + LLG    S  +TEA      +     +++W
Sbjct: 654 QITKRGFSSEGEYLG--ISLLGMYMNSRGMTEACALFSELSSPKSIVLW 700



 Score =  251 bits (641), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 160/560 (28%), Positives = 279/560 (49%), Gaps = 44/560 (7%)

Query: 94  FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
             +GK VHS      ++    + N+++ LY+KC  ++ A K F  +  ++D+ +W+SM+S
Sbjct: 76  LRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFL--EKDVTAWNSMLS 133

Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFD 213
            Y + GK    +  FV + E    PN++ FS V+  C+   NV  G  I+  ++K G   
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLER 193

Query: 214 SDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD 273
           +  C G AL+DM+ K    +  A +VF+ + + NTV WT + +   + G P +A+ +F  
Sbjct: 194 NSYC-GGALVDMYAKCD-RISDARRVFEWIVDPNTVCWTCLFSGYVKAGLPEEAVLVFER 251

Query: 274 MILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           M   G  PD      V++    L                                     
Sbjct: 252 MRDEGHRPDHLAFVTVINTYIRL------------------------------------- 274

Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
            G + D+R +F  M   +V++W  +I+G+ + G  +  A++ F +M +  V     T  S
Sbjct: 275 -GKLKDARLLFGEMSSPDVVAWNVMISGHGKRGC-ETVAIEYFFNMRKSSVKSTRSTLGS 332

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN 453
           VL A G + + ++   V+  A+K G A +  VG+SL+SMY++  +ME A K FE+L EKN
Sbjct: 333 VLSAIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKN 392

Query: 454 LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHA 513
            V +N M+  YA N  S K  EL  +++ +G     +TF SLLS  ++   +  G Q H+
Sbjct: 393 DVFWNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHS 452

Query: 514 RIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAAR 573
            IIK     N  + NAL+ MY++C  +E A Q+F+ M DR+ ++W ++I  + +    + 
Sbjct: 453 IIIKKKLAKNLFVGNALVDMYAKCGALEDARQIFERMCDRDNVTWNTIIGSYVQDENESE 512

Query: 574 ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMV 633
           A ++F +M   GI  +G    + L AC+H   + +G K    +  + G+ + +   + ++
Sbjct: 513 AFDLFKRMNLCGIVSDGACLASTLKACTHVHGLYQG-KQVHCLSVKCGLDRDLHTGSSLI 571

Query: 634 DLLGRSGSLTEALEFIRSMP 653
           D+  + G + +A +   S+P
Sbjct: 572 DMYSKCGIIKDARKVFSSLP 591



 Score =  209 bits (531), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 144/547 (26%), Positives = 271/547 (49%), Gaps = 14/547 (2%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           + ++G   K +     M   G + D  T++ LL +C  S +  +G   HS++ + KL  N
Sbjct: 403 YAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMGSQFHSIIIKKKLAKN 462

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             + N+L+ +Y+KCG L +A +IF+ M + RD V+W+++I SYV    + +A  +F  M 
Sbjct: 463 LFVGNALVDMYAKCGALEDARQIFERMCD-RDNVTWNTIIGSYVQDENESEAFDLFKRMN 521

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
             G   +  C ++ ++AC++   +  G  ++   +KCG  D D+  G +LIDM+ K  + 
Sbjct: 522 LCGIVSDGACLASTLKACTHVHGLYQGKQVHCLSVKCG-LDRDLHTGSSLIDMYSKCGI- 579

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
           ++ A KVF  + E + V    +I   +Q     +A+ LF +M+  G  P   T + +V A
Sbjct: 580 IKDARKVFSSLPEWSVVSMNALIAGYSQNNL-EEAVVLFQEMLTRGVNPSEITFATIVEA 638

Query: 293 CSELELFTSGKQLHSWAIRTGLALD-VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-H 350
           C + E  T G Q H    + G + +   +G SL+ MY        + ++  +F  +    
Sbjct: 639 CHKPESLTLGTQFHGQITKRGFSSEGEYLGISLLGMYMNSR---GMTEACALFSELSSPK 695

Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
           +++ WT +++G+ Q+G  + EA+K + +M    V P+  TF +VL+ C  L        +
Sbjct: 696 SIVLWTGMMSGHSQNGFYE-EALKFYKEMRHDGVLPDQATFVTVLRVCSVLSSLREGRAI 754

Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNLN 469
           ++        LD+   N+LI MYA+ G M+ + + F+ +  + N+VS+N++++ YAKN  
Sbjct: 755 HSLIFHLAHDLDELTSNTLIDMYAKCGDMKGSSQVFDEMRRRSNVVSWNSLINGYAKNGY 814

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYN 528
           +E A ++   +  + +     TF  +L+  S  G +  G +I   +I + G E+      
Sbjct: 815 AEDALKIFDSMRQSHIMPDEITFLGVLTACSHAGKVSDGRKIFEMMIGQYGIEARVDHVA 874

Query: 529 ALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
            ++ +  R   ++ A    +    + +   W+S++     HG   R  EI  + L +   
Sbjct: 875 CMVDLLGRWGYLQEADDFIEAQNLKPDARLWSSLLGACRIHGDDIRG-EISAEKLIELEP 933

Query: 588 PNGITYI 594
            N   Y+
Sbjct: 934 QNSSAYV 940



 Score =  206 bits (525), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 132/470 (28%), Positives = 235/470 (50%), Gaps = 44/470 (9%)

Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
           IG  ++   L  G  DS+  +G A++D++ K    +  A K FD + EK+   W  M++ 
Sbjct: 78  IGKAVHSKSLILG-IDSEGRLGNAIVDLYAK-CAQVSYAEKQFDFL-EKDVTAWNSMLSM 134

Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
            + +G P   +R F+ +  +   P++FT S V+S C+       G+Q+H   I+ GL  +
Sbjct: 135 YSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCARETNVEFGRQIHCSMIKMGLERN 194

Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
              G +LVDMYAKC     + D+R+VF+ ++D N + WT + +GYV++G   +EAV +F 
Sbjct: 195 SYCGGALVDMYAKCD---RISDARRVFEWIVDPNTVCWTCLFSGYVKAG-LPEEAVLVFE 250

Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
            M      P+H  F +V                                   I+ Y R G
Sbjct: 251 RMRDEGHRPDHLAFVTV-----------------------------------INTYIRLG 275

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
           +++DAR  F  +   ++V++N M+  + K      A E    +  + V ++  T  S+LS
Sbjct: 276 KLKDARLLFGEMSSPDVVAWNVMISGHGKRGCETVAIEYFFNMRKSSVKSTRSTLGSVLS 335

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
               +  +  G  +HA  IK G  SN  + ++L+SMYS+C  +EAA +VF+ +E++N + 
Sbjct: 336 AIGIVANLDLGLVVHAEAIKLGLASNIYVGSSLVSMYSKCEKMEAAAKVFEALEEKNDVF 395

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           W +MI G+A +G + + +E+F  M + G   +  T+ ++LS C+ +  +  G   F S+ 
Sbjct: 396 WNAMIRGYAHNGESHKVMELFMDMKSSGYNIDDFTFTSLLSTCAASHDLEMG-SQFHSII 454

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
            +  + + +     +VD+  + G+L +A +    M    D + W T +G+
Sbjct: 455 IKKKLAKNLFVGNALVDMYAKCGALEDARQIFERM-CDRDNVTWNTIIGS 503



 Score = 58.2 bits (139), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/98 (29%), Positives = 56/98 (57%), Gaps = 1/98 (1%)

Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
           A+  G+ +H++ +  G +S   + NA++ +Y++CA V  A + F  +E ++V +W SM++
Sbjct: 75  ALRIGKAVHSKSLILGIDSEGRLGNAIVDLYAKCAQVSYAEKQFDFLE-KDVTAWNSMLS 133

Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
            ++  G   + L  F  +  + I PN  T+  VLS C+
Sbjct: 134 MYSSIGKPGKVLRSFVSLFENQIFPNKFTFSIVLSTCA 171


>gi|3297823|emb|CAA19881.1| putative protein [Arabidopsis thaliana]
 gi|7270348|emb|CAB80116.1| putative protein [Arabidopsis thaliana]
          Length = 844

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 240/683 (35%), Positives = 381/683 (55%), Gaps = 33/683 (4%)

Query: 141 NKRDIVSWSSMISSYVNRGKQVDAIHMF-VEMLELGFCPNEYCFSAVIRACSNTENVAIG 199
             RD+ +W+ MIS Y   G   + I  F + ML  G  P+   F +V++AC     V  G
Sbjct: 46  QNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKAC---RTVIDG 102

Query: 200 HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
           + I+   LK G F  DV V  +LI ++ +    + +A  +FD+M  ++   W  MI+   
Sbjct: 103 NKIHCLALKFG-FMWDVYVAASLIHLYSRYKA-VGNARILFDEMPVRDMGSWNAMISGYC 160

Query: 260 QLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
           Q G  ++A+ L      +G    D  T+  ++SAC+E   F  G  +HS++I+ GL  ++
Sbjct: 161 QSGNAKEALTLS-----NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHSYSIKHGLESEL 215

Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
              C                  +KVFDRM   +++SW +II  Y +   +   A+ LF +
Sbjct: 216 LRDC------------------QKVFDRMYVRDLISWNSIIKAY-ELNEQPLRAISLFQE 256

Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-CVGNSLISMYARSG 437
           M   ++ P+  T  S+      L D      V    +++G  L+D  +GN+++ MYA+ G
Sbjct: 257 MRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVVVMYAKLG 316

Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLL 496
            ++ AR  F  L   +++S+NT++  YA+N  + +A E+ + +E+ G +  +  T+ S+L
Sbjct: 317 LVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQGTWVSVL 376

Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
              S  GA+ +G ++H R++K+G   +  +  +L  MY +C  +E A  +F ++   N +
Sbjct: 377 PACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALSLFYQIPRVNSV 436

Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
            W ++I     HG   +A+ +F +ML +G+KP+ IT++ +LSACSH+GL+ EG   F  M
Sbjct: 437 PWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWCFEMM 496

Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTEL 676
             ++GI   ++HY CMVD+ GR+G L  AL+FI+SM L  D  +W   L ACRVHG+ +L
Sbjct: 497 QTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHGNVDL 556

Query: 677 GKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADN 736
           GK A+E + E +P+    H+LLSN+YASAG WE V  IR     + L K  G S +E DN
Sbjct: 557 GKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRKTPGWSSMEVDN 616

Query: 737 KVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEK 796
           KV  F+ G  +HP   E+Y EL  L  K+K  GY+PD  FVL ++E+++K   L  HSE+
Sbjct: 617 KVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDEKEHILMSHSER 676

Query: 797 IAVAFGLISTSKSKPIRVFKNLR 819
           +A+AF LI+T     IR+FKNLR
Sbjct: 677 LAIAFALIATPAKTTIRIFKNLR 699



 Score =  193 bits (491), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 139/480 (28%), Positives = 239/480 (49%), Gaps = 39/480 (8%)

Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF-LDMILSGFLPDRFTLSGVVSA 292
           +S    FD +  ++   W LMI+   + G   + IR F L M+ SG  PD  T   V+ A
Sbjct: 36  KSKMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLKA 95

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C  +     G ++H  A++ G   DV V  SL+ +Y++     +V ++R +FD M   ++
Sbjct: 96  CRTV---IDGNKIHCLALKFGFMWDVYVAASLIHLYSRYK---AVGNARILFDEMPVRDM 149

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
            SW A+I+GY QSG   KEA+ L +    G  A +  T  S+L AC    D N    +++
Sbjct: 150 GSWNAMISGYCQSGNA-KEALTLSN----GLRAMDSVTVVSLLSACTEAGDFNRGVTIHS 204

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           +++K G                 S  + D +K F+ ++ ++L+S+N+++ AY  N    +
Sbjct: 205 YSIKHG---------------LESELLRDCQKVFDRMYVRDLISWNSIIKAYELNEQPLR 249

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG-FESNHCIYNALI 531
           A  L  E+  + +     T  SL S  S +G I     +    ++ G F  +  I NA++
Sbjct: 250 AISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIGNAVV 309

Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNG 590
            MY++   V++A  VF  + + +VISW ++I+G+A++GFA+ A+E++  M  +G I  N 
Sbjct: 310 VMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEIAANQ 369

Query: 591 ITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            T+++VL ACS AG + +G K H R +  ++G+   +     + D+ G+ G L +AL   
Sbjct: 370 GTWVSVLPACSQAGALRQGMKLHGRLL--KNGLYLDVFVVTSLADMYGKCGRLEDALSLF 427

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQ--DPQDPAAHILLSNLYASAGH 707
             +P   + + W T +     HG  E     A M+ ++  D      HI    L ++  H
Sbjct: 428 YQIP-RVNSVPWNTLIACHGFHGHGE----KAVMLFKEMLDEGVKPDHITFVTLLSACSH 482



 Score =  188 bits (478), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 169/620 (27%), Positives = 281/620 (45%), Gaps = 55/620 (8%)

Query: 19  KPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLN--------DGRVQKAIFTLDL-M 69
           +P+  +  +L P+ S     +  T + + NR +Y  N         G   + I    L M
Sbjct: 23  QPNVSTHVSLSPNKS-----KMHTFDHIQNRDVYAWNLMISGYGRAGNSSEVIRCFSLFM 77

Query: 70  TQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
              G  PD  T+  +LK+C   R    G  +H L  +     +  +  SLI LYS+   +
Sbjct: 78  LSSGLTPDYRTFPSVLKAC---RTVIDGNKIHCLALKFGFMWDVYVAASLIHLYSRYKAV 134

Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA 189
             A  +F  M   RD+ SW++MIS Y   G   +A+ +   +  +    +     +++ A
Sbjct: 135 GNARILFDEM-PVRDMGSWNAMISGYCQSGNAKEALTLSNGLRAM----DSVTVVSLLSA 189

Query: 190 CSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
           C+   +   G  I+ + +K G  +S++   C                 KVFD+M  ++ +
Sbjct: 190 CTEAGDFNRGVTIHSYSIKHG-LESELLRDCQ----------------KVFDRMYVRDLI 232

Query: 250 GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
            W  +I        P  AI LF +M LS   PD  TL  + S  S+L    + + +  + 
Sbjct: 233 SWNSIIKAYELNEQPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFT 292

Query: 310 IRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
           +R G  L D+ +G ++V MYAK    G VD +R VF+ + + +V+SW  II+GY Q+ G 
Sbjct: 293 LRKGWFLEDITIGNAVVVMYAKL---GLVDSARAVFNWLPNTDVISWNTIISGYAQN-GF 348

Query: 369 DKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
             EA+++++ M  +G++A N  T+ SVL AC          +++   +K G  LD  V  
Sbjct: 349 ASEAIEMYNIMEEEGEIAANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVT 408

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           SL  MY + GR+EDA   F  +   N V +NT++  +  + + EKA  L  E+ D GV  
Sbjct: 409 SLADMYGKCGRLEDALSLFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKP 468

Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARI-IKSGFESNHCIYNALISMYSRCANVEAAFQV 546
              TF +LLS  S  G + +G+     +    G   +   Y  ++ MY R   +E A + 
Sbjct: 469 DHITFVTLLSACSHSGLVDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKF 528

Query: 547 FKEMEDRNVIS-WTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
            K M  +   S W ++++    HG       A E  ++     ++P  + Y  +LS    
Sbjct: 529 IKSMSLQPDASIWGALLSACRVHGNVDLGKIASEHLFE-----VEPEHVGYHVLLSNMYA 583

Query: 603 AGLISEGWKHFRSMYDEHGI 622
           +    EG    RS+    G+
Sbjct: 584 SAGKWEGVDEIRSIAHGKGL 603


>gi|296085005|emb|CBI28420.3| unnamed protein product [Vitis vinifera]
          Length = 631

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 229/634 (36%), Positives = 367/634 (57%), Gaps = 60/634 (9%)

Query: 276 LSGFLPDRFTLS--GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
           L  +LP    LS     SA  E+E      QLH+++++T +     V   L+ +Y+    
Sbjct: 10  LQQYLPHNLHLSLFQTCSAPQEVE------QLHAFSLKTAIFNHPFVSSRLLALYS---- 59

Query: 334 DGSVDD---SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
           D  ++D   +R +FDR+   +++ W  II  YV++     + + LF +++  +  P++FT
Sbjct: 60  DPKINDLGYARSIFDRIQRRSLIHWNTIIKCYVENQ-FSHDGIVLFHELVH-EYLPDNFT 117

Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
              V+K C  L      +Q++  A+K G   D  V  SL++MY++ G ++ ARK F+ + 
Sbjct: 118 LPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKVFDGMI 177

Query: 451 EK-----------NLVSYNTMVDAYAKNLNSEKAFELLHEIE------------------ 481
           +K           NLVS+N M++ Y K+ + + A EL +++                   
Sbjct: 178 DKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAGYELNG 237

Query: 482 -------------DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
                          G   S  T  S+LS  S +  +GKG  IH+ + K+GFE +  +  
Sbjct: 238 QFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFELDGILGT 297

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
           +LI MY++C  +E+A  VF+ ++ + V  WT++I G   HG A  AL +F +M   G+KP
Sbjct: 298 SLIEMYAKCGCIESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEMCKTGLKP 357

Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
           N I +I VL+AC+HAGL+ +G ++F  M +E+ I   +EHY C+VD+L R+G L EA   
Sbjct: 358 NAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHLEEAKNT 417

Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
           I +MP+S + ++W + LG  R HG  ++G++AA+ ++E  P+    +ILLSN+YA++G W
Sbjct: 418 IENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGCYILLSNMYAASGMW 477

Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
           E V+++R+ M +R   K+ GCS +E    +H+F VG+ SHP+T EIYA++ ++  K+K  
Sbjct: 478 EKVSHVREMMYKRGFRKDPGCSSVEHKGTLHEFIVGDISHPQTKEIYAKMSEMKEKLKCV 537

Query: 769 GYLPDTNFVLHELE-EEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
           G++PDT  VL  +E E++K   L  HSE++A+AFGLI+     PIR+ KNLRVC DCH+ 
Sbjct: 538 GHVPDTTQVLLCIEGEKEKEAELENHSERLAIAFGLINVKPGIPIRIMKNLRVCNDCHSV 597

Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            K +S +  REI++RD+ RFHH K+G CSC DYW
Sbjct: 598 TKLLSKIYSREIIVRDNCRFHHFKNGSCSCMDYW 631



 Score =  149 bits (375), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 134/503 (26%), Positives = 215/503 (42%), Gaps = 96/503 (19%)

Query: 100 VHSLLTRSKLEPNSVILNSLISLYS--KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           +H+   ++ +  +  + + L++LYS  K  DL  A  IF  +  +R ++ W+++I  YV 
Sbjct: 35  LHAFSLKTAIFNHPFVSSRLLALYSDPKINDLGYARSIFDRI-QRRSLIHWNTIIKCYVE 93

Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
                D I +F E++   + P+ +    VI+ C+    V  G  I+G  LK G F SDV 
Sbjct: 94  NQFSHDGIVLFHELVH-EYLPDNFTLPCVIKGCARLGVVQEGKQIHGLALKIG-FGSDVF 151

Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTV---------------------------- 249
           V  +L++M+ K   +++ A KVFD M +K+ V                            
Sbjct: 152 VQGSLVNMYSKCG-EIDCARKVFDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDS 210

Query: 250 --------------GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
                          W LMI      G   DA+++F  M+  G  P   TL  V+SA S 
Sbjct: 211 ALELFYQMPIWDLVTWNLMIAGYELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSG 270

Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
           L +   G+ +HS+  + G  LD  +G SL++MYAKC   G ++ +  VF  +    V  W
Sbjct: 271 LAVLGKGRWIHSYMEKNGFELDGILGTSLIEMYAKC---GCIESALTVFRAIQKKKVGHW 327

Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
           TAII G +   G    A+ LF +M +  + PN   F  VL AC +               
Sbjct: 328 TAIIVG-LGIHGMANHALALFLEMCKTGLKPNAIIFIGVLNACNH--------------- 371

Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNS 470
                               +G ++D R+ F+ +      E  L  Y  +VD   +  + 
Sbjct: 372 --------------------AGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAGHL 411

Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
           E+A    + IE+  +  +   + SLL G+ + G I  GE    R+I+   E+  C Y  L
Sbjct: 412 EEA---KNTIENMPISPNKVIWMSLLGGSRNHGKIDIGEYAAQRVIEVAPETIGC-YILL 467

Query: 531 ISMYSRCANVEAAFQVFKEMEDR 553
            +MY+     E    V + M  R
Sbjct: 468 SNMYAASGMWEKVSHVREMMYKR 490



 Score =  111 bits (278), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 89/341 (26%), Positives = 151/341 (44%), Gaps = 56/341 (16%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T   ++K C R      GK +H L  +     +  +  SL+++YSKCG+++ A K+
Sbjct: 113 PDNFTLPCVIKGCARLGVVQEGKQIHGLALKIGFGSDVFVQGSLVNMYSKCGEIDCARKV 172

Query: 136 FKSMGNKR-----------------------------------------DIVSWSSMISS 154
           F  M +K                                          D+V+W+ MI+ 
Sbjct: 173 FDGMIDKDVVLWNSLIDGNLVSWNAMINGYMKSGDFDSALELFYQMPIWDLVTWNLMIAG 232

Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
           Y   G+ +DA+ MF  ML+LG  P+     +V+ A S    +  G  I+ ++ K G F+ 
Sbjct: 233 YELNGQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNG-FEL 291

Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
           D  +G +LI+M+ K    +ESA  VF  + +K    WT +I      G    A+ LFL+M
Sbjct: 292 DGILGTSLIEMYAKCGC-IESALTVFRAIQKKKVGHWTAIIVGLGIHGMANHALALFLEM 350

Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQ-----LHSWAIRTGLALDVCVGCSLVDMYA 329
             +G  P+     GV++AC+   L   G+Q     ++ + I   L    C    LVD+  
Sbjct: 351 CKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGC----LVDILC 406

Query: 330 KCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRD 369
           +    G +++++   + M +  N + W +++ G    G  D
Sbjct: 407 RA---GHLEEAKNTIENMPISPNKVIWMSLLGGSRNHGKID 444



 Score = 65.9 bits (159), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 49/201 (24%), Positives = 92/201 (45%), Gaps = 4/201 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G+   A+    +M + G+ P   T   +L +         G+ +HS + ++  E 
Sbjct: 233 YELN-GQFMDAVKMFFMMLKLGSRPSHATLVSVLSAVSGLAVLGKGRWIHSYMEKNGFEL 291

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
           + ++  SLI +Y+KCG +  A  +F+++  K+ +  W+++I      G    A+ +F+EM
Sbjct: 292 DGILGTSLIEMYAKCGCIESALTVFRAI-QKKKVGHWTAIIVGLGIHGMANHALALFLEM 350

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
            + G  PN   F  V+ AC++   V  G   +  ++     +  +     L+D+  +   
Sbjct: 351 CKTGLKPNAIIFIGVLNACNHAGLVDDGRQYFDMMMNEYKIEPTLEHYGCLVDILCRAG- 409

Query: 232 DLESAYKVFDKM-TEKNTVGW 251
            LE A    + M    N V W
Sbjct: 410 HLEEAKNTIENMPISPNKVIW 430


>gi|15236277|ref|NP_195239.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098809|sp|O49619.1|PP350_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g35130, chloroplastic; Flags: Precursor
 gi|2924523|emb|CAA17777.1| putative protein [Arabidopsis thaliana]
 gi|7270464|emb|CAB80230.1| putative protein [Arabidopsis thaliana]
 gi|332661071|gb|AEE86471.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 804

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/736 (32%), Positives = 413/736 (56%), Gaps = 14/736 (1%)

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           + +A ++F  M NK D   W+ MI  + + G  ++A+  +  M+  G   + + +  VI+
Sbjct: 80  MEDALQLFDEM-NKADAFLWNVMIKGFTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIK 138

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           + +   ++  G  I+  ++K G F SDV V  +LI +++K     + A KVF++M E++ 
Sbjct: 139 SVAGISSLEEGKKIHAMVIKLG-FVSDVYVCNSLISLYMKLGCAWD-AEKVFEEMPERDI 196

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
           V W  MI+    LG    ++ LF +M+  GF PDRF+    + ACS +     GK++H  
Sbjct: 197 VSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALGACSHVYSPKMGKEIHCH 256

Query: 309 AIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           A+R+ +   DV V  S++DMY+K    G V  + ++F+ M+  N+++W  +I  Y ++G 
Sbjct: 257 AVRSRIETGDVMVMTSILDMYSKY---GEVSYAERIFNGMIQRNIVAWNVMIGCYARNG- 312

Query: 368 RDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVG 426
           R  +A   F  M  Q  + P+  T  ++L A   L        ++ +A++RG      + 
Sbjct: 313 RVTDAFLCFQKMSEQNGLQPDVITSINLLPASAIL----EGRTIHGYAMRRGFLPHMVLE 368

Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
            +LI MY   G+++ A   F+ + EKN++S+N+++ AY +N  +  A EL  E+ D+ + 
Sbjct: 369 TALIDMYGECGQLKSAEVIFDRMAEKNVISWNSIIAAYVQNGKNYSALELFQELWDSSLV 428

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
             + T AS+L   +   ++ +G +IHA I+KS + SN  I N+L+ MY+ C ++E A + 
Sbjct: 429 PDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILNSLVHMYAMCGDLEDARKC 488

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
           F  +  ++V+SW S+I  +A HGF   ++ +F +M+A  + PN  T+ ++L+ACS +G++
Sbjct: 489 FNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNPNKSTFASLLAACSISGMV 548

Query: 607 SEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLG 666
            EGW++F SM  E+GI   +EHY CM+DL+GR+G+ + A  F+  MP      +W + L 
Sbjct: 549 DEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRFLEEMPFVPTARIWGSLLN 608

Query: 667 ACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKE 726
           A R H D  + + AAE I + +  +   ++LL N+YA AG WE V  I+  M+ + + + 
Sbjct: 609 ASRNHKDITIAEFAAEQIFKMEHDNTGCYVLLLNMYAEAGRWEDVNRIKLLMESKGISRT 668

Query: 727 AGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG-YLPDTNFVLHELEEEQ 785
           +  S +EA  K H F  G+ SH  T +IY  LD ++  + E   Y+   + +  E   + 
Sbjct: 669 SSRSTVEAKGKSHVFTNGDRSHVATNKIYEVLDVVSRMVGEEDIYVHCVSRLRPETLVKS 728

Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
           +     +HS ++A  FGLIST   + + V  N R+C  CH  ++  S +T REIV+ DS 
Sbjct: 729 RSNSPRRHSVRLATCFGLISTETGRRVTVRNNTRICRKCHEFLEKASRLTRREIVVGDSK 788

Query: 846 RFHHIKDGKCSCNDYW 861
            FHH  +G+CSC +YW
Sbjct: 789 IFHHFSNGRCSCGNYW 804



 Score =  232 bits (592), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 165/542 (30%), Positives = 276/542 (50%), Gaps = 20/542 (3%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M   G   D  TY  ++KS     +   GK +H+++ +     +  + NSLISLY K G 
Sbjct: 121 MVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSDVYVCNSLISLYMKLGC 180

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
             +A K+F+ M  +RDIVSW+SMIS Y+  G    ++ +F EML+ GF P+ +   + + 
Sbjct: 181 AWDAEKVFEEMP-ERDIVSWNSMISGYLALGDGFSSLMLFKEMLKCGFKPDRFSTMSALG 239

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
           ACS+  +  +G  I+   ++      DV V  +++DM+ K   ++  A ++F+ M ++N 
Sbjct: 240 ACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYG-EVSYAERIFNGMIQRNI 298

Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
           V W +MI    + G   DA   F  M   +G  PD  T   ++ A + LE    G+ +H 
Sbjct: 299 VAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPASAILE----GRTIHG 354

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
           +A+R G    + +  +L+DMY +C   G +  +  +FDRM + NV+SW +II  YVQ+ G
Sbjct: 355 YAMRRGFLPHMVLETALIDMYGEC---GQLKSAEVIFDRMAEKNVISWNSIIAAYVQN-G 410

Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
           ++  A++LF ++    + P+  T AS+L A    L  +   +++ + VK     +  + N
Sbjct: 411 KNYSALELFQELWDSSLVPDSTTIASILPAYAESLSLSEGREIHAYIVKSRYWSNTIILN 470

Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
           SL+ MYA  G +EDARK F  +  K++VS+N+++ AYA +     +  L  E+  + V  
Sbjct: 471 SLVHMYAMCGDLEDARKCFNHILLKDVVSWNSIIMAYAVHGFGRISVWLFSEMIASRVNP 530

Query: 488 SAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
           +  TFASLL+  S  G + +G E   +   + G +     Y  ++ +  R  N  AA + 
Sbjct: 531 NKSTFASLLAACSISGMVDEGWEYFESMKREYGIDPGIEHYGCMLDLIGRTGNFSAAKRF 590

Query: 547 FKEMEDRNVIS-WTSMITGFAKHG---FAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
            +EM        W S++     H     A  A E  +KM  D    N   Y+ +L+  + 
Sbjct: 591 LEEMPFVPTARIWGSLLNASRNHKDITIAEFAAEQIFKMEHD----NTGCYVLLLNMYAE 646

Query: 603 AG 604
           AG
Sbjct: 647 AG 648



 Score =  105 bits (263), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 98/396 (24%), Positives = 166/396 (41%), Gaps = 59/396 (14%)

Query: 404 SNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
           S  A  V     K  + ++D      +  +A S  MEDA + F+ + + +   +N M+  
Sbjct: 45  SKPARLVLRDRYKVTKQVNDPALTRALRGFADSRLMEDALQLFDEMNKADAFLWNVMIKG 104

Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
           +       +A +    +   GV    +T+  ++   + I ++ +G++IHA +IK GF S+
Sbjct: 105 FTSCGLYIEAVQFYSRMVFAGVKADTFTYPFVIKSVAGISSLEEGKKIHAMVIKLGFVSD 164

Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA 583
             + N+LIS+Y +      A +VF+EM +R+++SW SMI+G+   G    +L +F +ML 
Sbjct: 165 VYVCNSLISLYMKLGCAWDAEKVFEEMPERDIVSWNSMISGYLALGDGFSSLMLFKEMLK 224

Query: 584 DGIKPNGITYIAVLSACSHA---------------GLISEG----WKHFRSMYDEHGIVQ 624
            G KP+  + ++ L ACSH                  I  G          MY ++G V 
Sbjct: 225 CGFKPDRFSTMSALGACSHVYSPKMGKEIHCHAVRSRIETGDVMVMTSILDMYSKYGEVS 284

Query: 625 RMEH------------YACMVDLLGRSGSLTEALEFIRSMP----LSADVLVWRTFLGAC 668
             E             +  M+    R+G +T+A    + M     L  DV+     L A 
Sbjct: 285 YAERIFNGMIQRNIVAWNVMIGCYARNGRVTDAFLCFQKMSEQNGLQPDVITSINLLPAS 344

Query: 669 ------RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERN 722
                  +HG          M+LE           L ++Y   G  +    I  RM E+N
Sbjct: 345 AILEGRTIHGYAMRRGFLPHMVLET---------ALIDMYGECGQLKSAEVIFDRMAEKN 395

Query: 723 LIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
           +I     SW    N +   +V    +   LE++ EL
Sbjct: 396 VI-----SW----NSIIAAYVQNGKNYSALELFQEL 422


>gi|242051881|ref|XP_002455086.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
 gi|241927061|gb|EES00206.1| hypothetical protein SORBIDRAFT_03g004125 [Sorghum bicolor]
          Length = 627

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 227/632 (35%), Positives = 350/632 (55%), Gaps = 42/632 (6%)

Query: 266 DAIRLFLDMILSGFLPDRFT----LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
           DA+  +  M+  G  PD +T    L  V  A          + +H+  +R G+  +  V 
Sbjct: 2   DAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHVA 61

Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
            SLV  Y       +        D       ++W A+I+G+   GGR  E+   F DM +
Sbjct: 62  SSLVAAYTAGGDGAAARALVGECD-----TPVAWNALISGH-NRGGRFGESCGSFVDMAR 115

Query: 382 GQVAPNHFTFASVLKACG-NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA------ 434
              AP   T+ SVL ACG    D  +  QV+   V  G   D  V N+L+ MYA      
Sbjct: 116 AGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECADMG 175

Query: 435 -------------------------RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
                                    R G++++AR  F+ + E++ VS+  M+D Y     
Sbjct: 176 SAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAAR 235

Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
             +A E+  E++ + V    +T  S+++  + +GA+  GE +   + + G + +  + NA
Sbjct: 236 FREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNA 295

Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
           LI MYS+C ++E A  VFK M  R+  +WT++I G A +G+   A+E+F++M+     P+
Sbjct: 296 LIDMYSKCGSIERALDVFKGMHHRDKFTWTAIILGLAVNGYEEEAIEMFHRMIRVSETPD 355

Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
            +T+I VL+AC+HAGL+ +G + F SM + + I   + HY C++DLLGR+G +TEAL+ I
Sbjct: 356 EVTFIGVLTACTHAGLVDKGREFFLSMIEAYNIAPNVVHYGCIIDLLGRAGKITEALDTI 415

Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
             MP++ +  +W T L ACRVHG++E+G+  AE +LE DP++   +ILLSN+YA    WE
Sbjct: 416 DQMPMTPNSTIWGTLLAACRVHGNSEIGELVAERLLELDPENSMVYILLSNIYAKCNRWE 475

Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
            V  +R  + E+ + KE GCS IE D  +H+F  G+ SHP + EIY++L+ +   +   G
Sbjct: 476 DVRRLRHAIMEKGIKKEPGCSLIEMDGIIHEFVAGDQSHPMSKEIYSKLESIISDLNNVG 535

Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
           Y PD   V  E+ E++K + L+ HSEK+A+AF L+S+  +  IR+ KNLR+C DCH AIK
Sbjct: 536 YFPDVTEVFVEVAEKEKKKVLYWHSEKLAIAFALLSSKPNTVIRIVKNLRMCLDCHNAIK 595

Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
            IS + GRE+V+RD  RFHH + G CSC DYW
Sbjct: 596 LISRLYGREVVVRDRTRFHHFRHGFCSCKDYW 627



 Score =  155 bits (391), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 138/523 (26%), Positives = 238/523 (45%), Gaps = 89/523 (17%)

Query: 60  QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR----SRNFHLGKLVHSLLTRSKLEPNSVI 115
           + A+     M  +G  PD  T+  LLK+  R    S +    + VH+ + R  +  N+ +
Sbjct: 1   EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60

Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
            +SL++ Y+  GD   A  +   +G     V+W+++IS +   G+  ++   FV+M   G
Sbjct: 61  ASSLVAAYTAGGDGAAARAL---VGECDTPVAWNALISGHNRGGRFGESCGSFVDMARAG 117

Query: 176 FCPNEYCFSAVIRACS-NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
             P    + +V+ AC   T +V +G  ++G ++  G    D+ V  AL+DM+ +   D+ 
Sbjct: 118 AAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVL-PDLRVENALVDMYAE-CADMG 175

Query: 235 SAYKVFD-------------------------------KMTEKNTVGWTLMITRCTQLGC 263
           SA+KVFD                               +M E++TV WT MI        
Sbjct: 176 SAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVWAAR 235

Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
            R+A+ +F +M  S    D FT+  V++AC++L     G+ +  +  R G+ +D  VG +
Sbjct: 236 FREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEWVRVYMSRQGIKMDAFVGNA 295

Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
           L+DMY+KC   GS++ +  VF  M   +  +WTAII G +   G ++EA+++F  MI+  
Sbjct: 296 LIDMYSKC---GSIERALDVFKGMHHRDKFTWTAIILG-LAVNGYEEEAIEMFHRMIRVS 351

Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
             P+  TF  VL AC             THA                      G ++  R
Sbjct: 352 ETPDEVTFIGVLTAC-------------THA----------------------GLVDKGR 376

Query: 444 KAFESLFEK-----NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           + F S+ E      N+V Y  ++D   +   + K  E L  I+   +  ++  + +LL+ 
Sbjct: 377 EFFLSMIEAYNIAPNVVHYGCIIDLLGR---AGKITEALDTIDQMPMTPNSTIWGTLLAA 433

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
               G    GE +  R+++   E N  +Y  L ++Y++C   E
Sbjct: 434 CRVHGNSEIGELVAERLLELDPE-NSMVYILLSNIYAKCNRWE 475



 Score =  120 bits (302), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 111/439 (25%), Positives = 184/439 (41%), Gaps = 83/439 (18%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLTRSKLEP 111
           H   GR  ++  +   M + G  P   TY  +L +C + +R+  LG  VH  +  S + P
Sbjct: 97  HNRGGRFGESCGSFVDMARAGAAPTPVTYVSVLSACGKGTRDVLLGMQVHGRVVGSGVLP 156

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNK----------------------------- 142
           +  + N+L+ +Y++C D+  A K+F  M  +                             
Sbjct: 157 DLRVENALVDMYAECADMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMP 216

Query: 143 -RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
            RD VSW++MI  YV   +  +A+ MF EM       +E+   +VI AC+    + +G  
Sbjct: 217 ERDTVSWTAMIDGYVWAARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMGEW 276

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
           +  ++ + G    D  VG ALIDM+ K GS+  E A  VF  M  ++   WT +I     
Sbjct: 277 VRVYMSRQG-IKMDAFVGNALIDMYSKCGSI--ERALDVFKGMHHRDKFTWTAIILGLAV 333

Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
            G   +AI +F  MI     PD  T  GV++AC+   L   G++                
Sbjct: 334 NGYEEEAIEMFHRMIRVSETPDEVTFIGVLTACTHAGLVDKGREFF-------------- 379

Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
             S+++ Y                   +  NV+ +  II   +   G+  EA+     M 
Sbjct: 380 -LSMIEAYN------------------IAPNVVHYGCIID-LLGRAGKITEALDTIDQM- 418

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI-----SMYAR 435
              + PN   + ++L AC    +S + E V        R L+    NS++     ++YA+
Sbjct: 419 --PMTPNSTIWGTLLAACRVHGNSEIGELVAE------RLLELDPENSMVYILLSNIYAK 470

Query: 436 SGRMEDARKAFESLFEKNL 454
             R ED R+   ++ EK +
Sbjct: 471 CNRWEDVRRLRHAIMEKGI 489



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 87/350 (24%), Positives = 159/350 (45%), Gaps = 56/350 (16%)

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKA----CGNLLDSNVAEQVYTHAVKRGRALDDCV 425
           ++AV  ++ M+     P+ +TF ++LKA     G    +  A  V+ H V+ G   +  V
Sbjct: 1   EDAVAGYARMLARGGRPDAYTFPALLKAVARAAGGSGSAAPARAVHAHVVRLGMGRNAHV 60

Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
            +SL++ Y   G    AR           V++N ++  + +     ++     ++   G 
Sbjct: 61  ASSLVAAYTAGGDGAAARALVGEC--DTPVAWNALISGHNRGGRFGESCGSFVDMARAGA 118

Query: 486 GTSAYTFASLLSGASSIGAIGKGE-------QIHARIIKSGFESNHCIYNALISMYSRCA 538
             +  T+ S+LS      A GKG        Q+H R++ SG   +  + NAL+ MY+ CA
Sbjct: 119 APTPVTYVSVLS------ACGKGTRDVLLGMQVHGRVVGSGVLPDLRVENALVDMYAECA 172

Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHG----------------------------F 570
           ++ +A++VF  M+ R+V+SWTS+++G A+ G                            +
Sbjct: 173 DMGSAWKVFDGMQVRSVVSWTSLLSGLARLGQVDEARDLFDRMPERDTVSWTAMIDGYVW 232

Query: 571 AAR---ALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRME 627
           AAR   ALE+F +M    +  +  T ++V++AC+  G +  G +  R      GI  +M+
Sbjct: 233 AARFREALEMFREMQYSNVSADEFTMVSVITACAQLGALEMG-EWVRVYMSRQGI--KMD 289

Query: 628 HYA--CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
            +    ++D+  + GS+  AL+  + M    D   W   +    V+G  E
Sbjct: 290 AFVGNALIDMYSKCGSIERALDVFKGMH-HRDKFTWTAIILGLAVNGYEE 338


>gi|356554981|ref|XP_003545819.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g27110-like [Glycine max]
          Length = 705

 Score =  426 bits (1096), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 242/715 (33%), Positives = 396/715 (55%), Gaps = 30/715 (4%)

Query: 78  LDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           +DT  LL  L++C+ S++   GKL+H  +    L+ +  +  +LI+ Y  C   + A  +
Sbjct: 1   MDTRKLLPLLRACMNSKSLKQGKLIHQKVVTLGLQNDIFLCKTLINQYLSCHLYDHAKCV 60

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTE 194
           F +M N  +I  W+ +++ Y      V+A+ +F ++L   +  P+ Y + +V +AC    
Sbjct: 61  FDNMENPCEISLWNGLMAGYTKNYMYVEALELFEKLLHYPYLKPDSYTYPSVFKACGGLH 120

Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
              +G +I+  L+K G    D+ VG +L+ M+ K +   E A  +F++M EK+   W  +
Sbjct: 121 RYVLGKMIHTCLIKTGLM-MDIVVGSSLVGMYGKCNA-FEKAIWLFNEMPEKDVACWNTV 178

Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
           I+   Q G  +DA+  F  M   GF P+  T++  +S+C+ L     G ++H   I +G 
Sbjct: 179 ISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGF 238

Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
            LD  +  +LVDMY KC   G ++ + ++F++M    V++W ++I+GY   G      ++
Sbjct: 239 LLDSFISSALVDMYGKC---GHLEMAIEIFEQMPKKTVVAWNSMISGYGLKGDI-ISCIQ 294

Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK-RGRALDDC-VGNSLISM 432
           LF  M    V P   T +S++  C     + + E  + H    R R   D  V +SL+ +
Sbjct: 295 LFKRMYNEGVKPTLTTLSSLIMVCSR--SARLLEGKFVHGYTIRNRIQPDVFVNSSLMDL 352

Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
           Y + G++E A K F+ + +  +VS+N M+  Y       +A  L  E+  + V + A TF
Sbjct: 353 YFKCGKVELAEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITF 412

Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
            S+L+  S + A+ KG++IH  II+   ++N  +  AL+ MY++C  V+ AF VFK +  
Sbjct: 413 TSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKCGAVDEAFSVFKCLPK 472

Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
           R+++SWTSMIT +  HG A  ALE+F +ML   +KP+ + ++A+LSAC HAGL+ EG  +
Sbjct: 473 RDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYY 532

Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP-LSADVLVWRTFLGACRVH 671
           F  M + +GI+ R+EHY+C++DLLGR+G L EA E ++  P +  DV +  T   ACR+H
Sbjct: 533 FNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQNPEIRDDVELLSTLFSACRLH 592

Query: 672 GDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSW 731
            + +LG   A  ++++DP D + +ILLSN+YASA  W+ V  +R +MKE  L K  GCSW
Sbjct: 593 RNIDLGAEIARTLIDKDPDDSSTYILLSNMYASAHKWDEVRVVRSKMKELGLKKNPGCSW 652

Query: 732 IEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQK 786
           IE + K+  F V + SH            L L  K   YL D       +E+E K
Sbjct: 653 IEINQKILPFFVEDNSHL----------HLELVFKCLSYLSD------HMEDESK 691



 Score =  219 bits (558), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 143/475 (30%), Positives = 242/475 (50%), Gaps = 8/475 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  TY  + K+C     + LGK++H+ L ++ L  + V+ +SL+ +Y KC    +A  +
Sbjct: 104 PDSYTYPSVFKACGGLHRYVLGKMIHTCLIKTGLMMDIVVGSSLVGMYGKCNAFEKAIWL 163

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K D+  W+++IS Y   G   DA+  F  M   GF PN    +  I +C+   +
Sbjct: 164 FNEMPEK-DVACWNTVISCYYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLD 222

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  I+  L+  G+   D  +  AL+DM+ K    LE A ++F++M +K  V W  MI
Sbjct: 223 LNRGMEIHEELINSGFL-LDSFISSALVDMYGKCG-HLEMAIEIFEQMPKKTVVAWNSMI 280

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           +     G     I+LF  M   G  P   TLS ++  CS       GK +H + IR  + 
Sbjct: 281 SGYGLKGDIISCIQLFKRMYNEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIRNRIQ 340

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
            DV V  SL+D+Y KC   G V+ + K+F  +    V+SW  +I+GYV + G+  EA+ L
Sbjct: 341 PDVFVNSSLMDLYFKC---GKVELAEKIFKLIPKSKVVSWNVMISGYV-AEGKLFEALGL 396

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           FS+M +  V  +  TF SVL AC  L      ++++   +++    ++ V  +L+ MYA+
Sbjct: 397 FSEMRKSYVESDAITFTSVLTACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAK 456

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            G +++A   F+ L +++LVS+ +M+ AY  + ++  A EL  E+  + V      F ++
Sbjct: 457 CGAVDEAFSVFKCLPKRDLVSWTSMITAYGSHGHAYGALELFAEMLQSNVKPDRVAFLAI 516

Query: 496 LSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKE 549
           LS     G + +G     ++I   G       Y+ LI +  R   +  A+++ ++
Sbjct: 517 LSACGHAGLVDEGCYYFNQMINVYGIIPRVEHYSCLIDLLGRAGRLHEAYEILQQ 571



 Score =  180 bits (456), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 122/401 (30%), Positives = 207/401 (51%), Gaps = 18/401 (4%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           +   G  + A+    LM + G  P+  T +  + SC R  + + G  +H  L  S    +
Sbjct: 182 YYQSGNFKDALEYFGLMRRFGFEPNSVTITTAISSCARLLDLNRGMEIHEELINSGFLLD 241

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
           S I ++L+ +Y KCG L  A +IF+ M  K+ +V+W+SMIS Y  +G  +  I +F  M 
Sbjct: 242 SFISSALVDMYGKCGHLEMAIEIFEQMP-KKTVVAWNSMISGYGLKGDIISCIQLFKRMY 300

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
             G  P     S++I  CS +  +  G  ++G+ ++      DV V  +L+D++ K G V
Sbjct: 301 NEGVKPTLTTLSSLIMVCSRSARLLEGKFVHGYTIR-NRIQPDVFVNSSLMDLYFKCGKV 359

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +L  A K+F  + +   V W +MI+     G   +A+ LF +M  S    D  T + V++
Sbjct: 360 EL--AEKIFKLIPKSKVVSWNVMISGYVAEGKLFEALGLFSEMRKSYVESDAITFTSVLT 417

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
           ACS+L     GK++H+  I   L  +  V  +L+DMYAKC   G+VD++  VF  +   +
Sbjct: 418 ACSQLAALEKGKEIHNLIIEKKLDNNEVVMGALLDMYAKC---GAVDEAFSVFKCLPKRD 474

Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDSN---V 406
           ++SWT++IT Y  S G    A++LF++M+Q  V P+   F ++L ACG+  L+D      
Sbjct: 475 LVSWTSMITAY-GSHGHAYGALELFAEMLQSNVKPDRVAFLAILSACGHAGLVDEGCYYF 533

Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
            + +  + +        C    LI +  R+GR+ +A +  +
Sbjct: 534 NQMINVYGIIPRVEHYSC----LIDLLGRAGRLHEAYEILQ 570


>gi|22328607|ref|NP_193141.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|223635650|sp|O23266.3|PP308_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g14050, mitochondrial; Flags: Precursor
 gi|332657965|gb|AEE83365.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 612

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 218/603 (36%), Positives = 350/603 (58%), Gaps = 37/603 (6%)

Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
           C+     T+ K LH+  ++ G+     +  +LV++Y KC   G+   + +VFD M   + 
Sbjct: 13  CARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKC---GAASHALQVFDEMPHRDH 69

Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
           ++W +++T   Q+    K      S      + P+ F F++++KAC NL   +   QV+ 
Sbjct: 70  IAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQVHC 129

Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
           H +    A D+ V +SL+ MYA+ G +  A+  F+S+  KN +S+  MV  YAK+   E+
Sbjct: 130 HFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAVFDSIRVKNTISWTAMVSGYAKSGRKEE 189

Query: 473 AFELLHEIE---------------DTGVGTSAYT-----------------FASLLSGAS 500
           A EL   +                 +G G  A++                  +S++   +
Sbjct: 190 ALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSIVGACA 249

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
           ++ A   G Q+H  +I  GF+S   I NALI MY++C++V AA  +F  M  R+V+SWTS
Sbjct: 250 NLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCSDVIAAKDIFSRMRHRDVVSWTS 309

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +I G A+HG A +AL ++  M++ G+KPN +T++ ++ ACSH G + +G + F+SM  ++
Sbjct: 310 LIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGRELFQSMTKDY 369

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI   ++HY C++DLLGRSG L EA   I +MP   D   W   L AC+  G  ++G   
Sbjct: 370 GIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQGRGQMGIRI 429

Query: 681 AEMILEQ-DPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVH 739
           A+ ++     +DP+ +ILLSN+YASA  W  V+  R+++ E  + K+ G S +E   +  
Sbjct: 430 ADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEMEVRKDPGHSSVEVRKETE 489

Query: 740 KFHVGETSHPKTLEIYAELDQLALKIK-EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIA 798
            F+ GETSHP   +I+  L +L  +++   GY+PDT+++LH+++E++K + LF HSE+ A
Sbjct: 490 VFYAGETSHPLKEDIFRLLKKLEEEMRIRNGYVPDTSWILHDMDEQEKEKLLFWHSERSA 549

Query: 799 VAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCN 858
           VA+GL+      PIR+ KNLRVCGDCH  +K+IS +T REI++RD+ R+HH K GKCSCN
Sbjct: 550 VAYGLLKAVPGTPIRIVKNLRVCGDCHVVLKHISEITEREIIVRDATRYHHFKGGKCSCN 609

Query: 859 DYW 861
           D+W
Sbjct: 610 DFW 612



 Score =  152 bits (385), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 230/513 (44%), Gaps = 90/513 (17%)

Query: 85  LKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRD 144
           L+ C R+R     K +H+ + +  +     + N+L+++Y KCG  + A ++F  M + RD
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQCCPLANTLVNVYGKCGAASHALQVFDEMPH-RD 68

Query: 145 IVSWSSMISSYVN---RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
            ++W+S++++       GK +           L   P+++ FSA+++AC+N  ++  G  
Sbjct: 69  HIAWASVLTALNQANLSGKTLSVFSSVGSSSGLR--PDDFVFSALVKACANLGSIDHGRQ 126

Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
           ++   +   Y + +V V  +L+DM+ K  + L SA  VFD +  KNT+ WT M++   + 
Sbjct: 127 VHCHFIVSEYANDEV-VKSSLVDMYAKCGL-LNSAKAVFDSIRVKNTISWTAMVSGYAKS 184

Query: 262 GCPRDAIRLFLDM----------ILSGFLP----------------------DRFTLSGV 289
           G   +A+ LF  +          ++SGF+                       D   LS +
Sbjct: 185 GRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSSI 244

Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
           V AC+ L    +G+Q+H   I  G    V +  +L+DMYAKC+    V  ++ +F RM  
Sbjct: 245 VGACANLAASIAGRQVHGLVIALGFDSCVFISNALIDMYAKCS---DVIAAKDIFSRMRH 301

Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
            +V+SWT++I G  Q G  +K A+ L+ DM+   V PN  TF  ++ AC ++        
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEK-ALALYDDMVSHGVKPNEVTFVGLIYACSHV-------- 352

Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAY 464
                                      G +E  R+ F+S+        +L  Y  ++D  
Sbjct: 353 ---------------------------GFVEKGRELFQSMTKDYGIRPSLQHYTCLLDLL 385

Query: 465 AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH 524
            ++   ++A  L+H +          T+A+LLS     G    G +I   ++ S    + 
Sbjct: 386 GRSGLLDEAENLIHTMP---FPPDEPTWAALLSACKRQGRGQMGIRIADHLVSSFKLKDP 442

Query: 525 CIYNALISMYSRCA---NVEAAFQVFKEMEDRN 554
             Y  L ++Y+  +    V  A +   EME R 
Sbjct: 443 STYILLSNIYASASLWGKVSEARRKLGEMEVRK 475



 Score =  135 bits (341), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 209/470 (44%), Gaps = 48/470 (10%)

Query: 187 IRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES-AYKVFDKMTE 245
           ++ C+    +     ++  ++K G      C   A   + V G     S A +VFD+M  
Sbjct: 10  LQLCARNRTLTTAKALHAHIVKLGIVQ---CCPLANTLVNVYGKCGAASHALQVFDEMPH 66

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQ 304
           ++ + W  ++T   Q       + +F  +  S  L PD F  S +V AC+ L     G+Q
Sbjct: 67  RDHIAWASVLTALNQANLSGKTLSVFSSVGSSSGLRPDDFVFSALVKACANLGSIDHGRQ 126

Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
           +H   I +  A D  V  SLVDMYAKC   G ++ ++ VFD +   N +SWTA+++GY +
Sbjct: 127 VHCHFIVSEYANDEVVKSSLVDMYAKC---GLLNSAKAVFDSIRVKNTISWTAMVSGYAK 183

Query: 365 SG------------------------------GRDKEAVKLFSDMIQGQV-APNHFTFAS 393
           SG                              G+  EA  +F++M + +V   +    +S
Sbjct: 184 SGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAFSVFTEMRRERVDILDPLVLSS 243

Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCV--GNSLISMYARSGRMEDARKAFESLFE 451
           ++ AC NL  S    QV+   +  G   D CV   N+LI MYA+   +  A+  F  +  
Sbjct: 244 IVGACANLAASIAGRQVHGLVIALG--FDSCVFISNALIDMYAKCSDVIAAKDIFSRMRH 301

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
           +++VS+ +++   A++  +EKA  L  ++   GV  +  TF  L+   S +G + KG ++
Sbjct: 302 RDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEVTFVGLIYACSHVGFVEKGREL 361

Query: 512 HARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
              + K  G   +   Y  L+ +  R   ++ A  +   M    +  +W ++++   + G
Sbjct: 362 FQSMTKDYGIRPSLQHYTCLLDLLGRSGLLDEAENLIHTMPFPPDEPTWAALLSACKRQG 421

Query: 570 FAARALEIFYKMLADGIKPNGITYIA---VLSACSHAGLISEGWKHFRSM 616
                + I   +++     +  TYI    + ++ S  G +SE  +    M
Sbjct: 422 RGQMGIRIADHLVSSFKLKDPSTYILLSNIYASASLWGKVSEARRKLGEM 471



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 47/342 (13%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD   +S L+K+C    +   G+ VH     S+   + V+ +SL+ +Y+KCG LN A  +
Sbjct: 103 PDDFVFSALVKACANLGSIDHGRQVHCHFIVSEYANDEVVKSSLVDMYAKCGLLNSAKAV 162

Query: 136 FKSMGNK------------------------------RDIVSWSSMISSYVNRGKQVDAI 165
           F S+  K                              +++ SW+++IS +V  GK ++A 
Sbjct: 163 FDSIRVKNTISWTAMVSGYAKSGRKEEALELFRILPVKNLYSWTALISGFVQSGKGLEAF 222

Query: 166 HMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
            +F EM  E     +    S+++ AC+N      G  ++G ++  G FDS V +  ALID
Sbjct: 223 SVFTEMRRERVDILDPLVLSSIVGACANLAASIAGRQVHGLVIALG-FDSCVFISNALID 281

Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
           M+ K S D+ +A  +F +M  ++ V WT +I    Q G    A+ L+ DM+  G  P+  
Sbjct: 282 MYAKCS-DVIAAKDIFSRMRHRDVVSWTSLIVGMAQHGQAEKALALYDDMVSHGVKPNEV 340

Query: 285 TLSGVVSACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
           T  G++ ACS +     G++L       + IR  L    C    L+D+  +    G +D+
Sbjct: 341 TFVGLIYACSHVGFVEKGRELFQSMTKDYGIRPSLQHYTC----LLDLLGR---SGLLDE 393

Query: 340 SRKVFDRM-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           +  +   M    +  +W A+++   +  GR +  +++   ++
Sbjct: 394 AENLIHTMPFPPDEPTWAALLSA-CKRQGRGQMGIRIADHLV 434


>gi|357114780|ref|XP_003559172.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g13880-like [Brachypodium distachyon]
          Length = 846

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/786 (31%), Positives = 429/786 (54%), Gaps = 29/786 (3%)

Query: 96  LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
           LGKL HS + R+   P   + N+L+++Y +CGD+  A  +F  M  +RD V+W+++I+ Y
Sbjct: 70  LGKLTHSHMLRAGYRPGLFLRNNLLAVYCRCGDMRHARLLFDGM-PRRDAVTWNTLIAGY 128

Query: 156 VNRGKQVD----------AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
            +                A+  F +    G   + + ++AV+ AC    +   G   +G 
Sbjct: 129 SSSSGGGGSTGGGATTRLALAAFRDARRDGVAVDRFTYAAVLAACGGAGDGRHGRAAHGM 188

Query: 206 LLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPR 265
           ++  G  ++      ++IDM+ K  + ++    VFD+  E++   W L+++   ++G P 
Sbjct: 189 VVASGLAETAFLTN-SVIDMYAKCGM-IDEVRLVFDRAEERDEASWNLLLSAYVRMGWPE 246

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ-LHSWAIRTGLALDVCVGCSL 324
            A+ + + M  SG   D F L G++ ACSELE     ++ LH   ++ GL LD+ VG ++
Sbjct: 247 VAVHVLVWMHRSGVKLDSFALGGILKACSELEGSEDVRRMLHGCVVKVGLDLDMFVGSAM 306

Query: 325 VDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD-----KEAVKLFSDM 379
           VDMYAK   +G ++++ KVFD + + NV+ ++A+I G+ + G         EA++LFS++
Sbjct: 307 VDMYAK---NGGLEEAIKVFDCIPNQNVVVYSAMIAGFARLGNDPCPEIRIEAIRLFSNL 363

Query: 380 IQGQVAPNHFTFASVLKACGNLLDS-NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
           ++ ++ P+ FTF SVL+ C NL ++ +   Q++ H +  G   D+ + N LI++Y+++  
Sbjct: 364 LRMRIKPSRFTFKSVLEVC-NLTNALHCGRQIHAHVIFNGFQEDEFIANVLINLYSKARS 422

Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
           + D+ + F    ++++ ++ +M+ A+A N N EK+ +L  E+ + G     +T +++++ 
Sbjct: 423 VNDSLRCFHMTPKQDVFTWTSMITAFADNENFEKSLDLFIELLNVGNEPDQFTLSNVMNA 482

Query: 499 ASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISW 558
            +++      +QIH   +KSG +      N+ I+MY    +++A+ + F+++   + +SW
Sbjct: 483 CAALSIPVTCKQIHCYTVKSGLDQFTVCGNSQIAMYRSMGDLKASKKTFEQITCLDTLSW 542

Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYD 618
           ++M+  +A HG    AL +  KM    +  N I ++AVL ACS  GL  EG++H+ SM  
Sbjct: 543 STMVLSYAVHGHENEALLLLQKMKDCRVGINDIAFLAVLIACSQLGLADEGFRHYDSMKS 602

Query: 619 EHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGK 678
           EHG     +H A +VDLL R G + EA +FI       D ++W   L ACR+HGD E G 
Sbjct: 603 EHGCAPNSKHKASVVDLLCRVGKIAEAEDFILRSGSENDPILWHALLRACRIHGDKERGI 662

Query: 679 HAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKV 738
              E ++E +P    ++++L NLY  AG        R  M+ER + KE G SW E    +
Sbjct: 663 KTGEKLMELEPFAARSYVVLYNLYMDAGKISLAMRTRGLMRERGMSKETGISWAEFGGSI 722

Query: 739 HKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELE-EEQKV--QYLFQHSE 795
           H F  G+ S  +   ++  L++L +++K+      T+  + EL  + +KV    L +H E
Sbjct: 723 HCFADGDNSCLQNTAVHTRLEELLIRVKQKTERGGTD--IWELGFQSRKVGKNSLGRHGE 780

Query: 796 KIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKC 855
            + VA GL +   S P+ V KN R+  + H  +K +S    REI++RD   FHH   G C
Sbjct: 781 LLGVALGLSTFPSSAPVTVMKNQRISWESHETLKLLSEGENREIIVRDLTHFHHFNQGSC 840

Query: 856 SCNDYW 861
           SC DYW
Sbjct: 841 SCRDYW 846



 Score =  218 bits (556), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 158/562 (28%), Positives = 283/562 (50%), Gaps = 26/562 (4%)

Query: 77  DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
           D  TY+ +L +C  + +   G+  H ++  S L   + + NS+I +Y+KCG ++E   +F
Sbjct: 162 DRFTYAAVLAACGGAGDGRHGRAAHGMVVASGLAETAFLTNSVIDMYAKCGMIDEVRLVF 221

Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
                +RD  SW+ ++S+YV  G    A+H+ V M   G   + +    +++ACS  E  
Sbjct: 222 DR-AEERDEASWNLLLSAYVRMGWPEVAVHVLVWMHRSGVKLDSFALGGILKACSELEGS 280

Query: 197 A-IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
             +  +++G ++K G  D D+ VG A++DM+ K    LE A KVFD +  +N V ++ MI
Sbjct: 281 EDVRRMLHGCVVKVG-LDLDMFVGSAMVDMYAKNG-GLEEAIKVFDCIPNQNVVVYSAMI 338

Query: 256 TRCTQLG---CPR---DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWA 309
               +LG   CP    +AIRLF +++     P RFT   V+  C+       G+Q+H+  
Sbjct: 339 AGFARLGNDPCPEIRIEAIRLFSNLLRMRIKPSRFTFKSVLEVCNLTNALHCGRQIHAHV 398

Query: 310 IRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRD 369
           I  G   D  +   L+++Y+K     SV+DS + F      +V +WT++IT +  +   +
Sbjct: 399 IFNGFQEDEFIANVLINLYSKAR---SVNDSLRCFHMTPKQDVFTWTSMITAFADNENFE 455

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
           K ++ LF +++     P+ FT ++V+ AC  L      +Q++ + VK G       GNS 
Sbjct: 456 K-SLDLFIELLNVGNEPDQFTLSNVMNACAALSIPVTCKQIHCYTVKSGLDQFTVCGNSQ 514

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
           I+MY   G ++ ++K FE +   + +S++TMV +YA + +  +A  LL +++D  VG + 
Sbjct: 515 IAMYRSMGDLKASKKTFEQITCLDTLSWSTMVLSYAVHGHENEALLLLQKMKDCRVGIND 574

Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKS--GFESNHCIYNALISMYSRCANV-EAAFQV 546
             F ++L   S +G   +G + H   +KS  G   N     +++ +  R   + EA   +
Sbjct: 575 IAFLAVLIACSQLGLADEGFR-HYDSMKSEHGCAPNSKHKASVVDLLCRVGKIAEAEDFI 633

Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP-NGITYIAVLSACSHAGL 605
            +   + + I W +++     HG   R ++   K++   ++P    +Y+ + +    AG 
Sbjct: 634 LRSGSENDPILWHALLRACRIHGDKERGIKTGEKLME--LEPFAARSYVVLYNLYMDAGK 691

Query: 606 IS-----EGWKHFRSMYDEHGI 622
           IS      G    R M  E GI
Sbjct: 692 ISLAMRTRGLMRERGMSKETGI 713



 Score = 91.3 bits (225), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 116/227 (51%), Gaps = 3/227 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P   T+  +L+ C  +   H G+ +H+ +  +  + +  I N LI+LYSK   +N++ + 
Sbjct: 370 PSRFTFKSVLEVCNLTNALHCGRQIHAHVIFNGFQEDEFIANVLINLYSKARSVNDSLRC 429

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K+D+ +W+SMI+++ +      ++ +F+E+L +G  P+++  S V+ AC+    
Sbjct: 430 FH-MTPKQDVFTWTSMITAFADNENFEKSLDLFIELLNVGNEPDQFTLSNVMNACAALSI 488

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
                 I+ + +K G     VC G + I M+ +   DL+++ K F+++T  +T+ W+ M+
Sbjct: 489 PVTCKQIHCYTVKSGLDQFTVC-GNSQIAMY-RSMGDLKASKKTFEQITCLDTLSWSTMV 546

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
                 G   +A+ L   M       +      V+ ACS+L L   G
Sbjct: 547 LSYAVHGHENEALLLLQKMKDCRVGINDIAFLAVLIACSQLGLADEG 593


>gi|147832325|emb|CAN66581.1| hypothetical protein VITISV_030261 [Vitis vinifera]
          Length = 622

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 228/604 (37%), Positives = 342/604 (56%), Gaps = 36/604 (5%)

Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
           ++  CS +E     +Q+H   ++TGL LD      L+   A     GS+  +R VFDR+ 
Sbjct: 24  LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPN-SGSLAYARTVFDRIF 79

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
             N   W  +I GY  S    +EA+ L+  M+   V  N +TF  +LKAC ++  S   +
Sbjct: 80  RPNTFMWNTMIRGYSNSK-EPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQ 138

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           Q++ H +K G   +    NSL+++Y++SG ++ AR  F+ + +++ VS+N+M+D Y K  
Sbjct: 139 QIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCG 198

Query: 469 NSEKAFE-------------------------------LLHEIEDTGVGTSAYTFASLLS 497
             E A+E                               L H ++  G+        S L 
Sbjct: 199 EIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQ 258

Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS 557
             + +G + +G+ IHA I K   E +  +   LI MY++C ++E A +VF++ME++ V  
Sbjct: 259 ACADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSV 318

Query: 558 WTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMY 617
           WT+MI+G+A HG    ALE F KM   G++PN +T+  +L+ACSHAGL+ E    F SM 
Sbjct: 319 WTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESME 378

Query: 618 DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
             HG    +EHY CMVDLLGR+G L EA E I +MP+  +  +W   L AC +HG+ ELG
Sbjct: 379 RIHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELG 438

Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNK 737
           K   +++++ DP     +I L++++A+AG W   A +R++MKE+ + K  GCS I  +  
Sbjct: 439 KQIGKILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQGVSKLPGCSVISVNGT 498

Query: 738 VHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKI 797
            H+F  G+ SHP+  EI   L+Q+  +++E GY P    +L +LE+++K   +  HSEK+
Sbjct: 499 AHEFLAGDESHPQIKEIDHMLEQIVERLREEGYKPKLGDLLLDLEDKEKETAIHHHSEKL 558

Query: 798 AVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSC 857
           AV FGLIST     IR+ KNLRVC DCHT IK IS V  REI++RD  RFH  KDG C+C
Sbjct: 559 AVTFGLISTKPGMTIRIVKNLRVCEDCHTVIKLISKVYAREILMRDRTRFHLFKDGNCTC 618

Query: 858 NDYW 861
            DYW
Sbjct: 619 GDYW 622



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/503 (24%), Positives = 229/503 (45%), Gaps = 82/503 (16%)

Query: 90  RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYS--KCGDLNEANKIFKSMGNKRDIVS 147
           R  N    + +H  + ++ L  + +  + L++  +    G L  A  +F  +  + +   
Sbjct: 27  RCSNMEELRQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRI-FRPNTFM 85

Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
           W++MI  Y N  +  +A+ ++  ML      N Y F  +++ACS+         I+  ++
Sbjct: 86  WNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQIHAHII 145

Query: 208 KCGYFDSDVCVGCALIDMFVK-GSV-----------------------------DLESAY 237
           K G F S++    +L++++ K G +                             ++E AY
Sbjct: 146 KMG-FGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEIEMAY 204

Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
           ++F+ M E+N + WT MI+ C   G P++A+ LF  M  +G   D   L   + AC++L 
Sbjct: 205 EIFNHMPERNIISWTSMISGCVGAGKPKEALNLFHRMQTAGIKLDNVALVSTLQACADLG 264

Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
           +   GK +H++  +  + +D  +GC L+DMYAKC   G ++++ +VF +M +  V  WTA
Sbjct: 265 VLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKC---GDLEEAIEVFRKMEEKGVSVWTA 321

Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
           +I+GY    GR +EA++ F  M    V PN  TF  +L AC                   
Sbjct: 322 MISGYAIH-GRGREALEWFMKMQTAGVEPNQMTFTGILTAC------------------- 361

Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEK 472
                           + +G + +A+  FES+     F+ ++  Y  MVD   +    ++
Sbjct: 362 ----------------SHAGLVHEAKLLFESMERIHGFKPSIEHYGCMVDLLGRAGLLKE 405

Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
           A EL   IE+  V  +A  + +LL+     G +  G+QI  +I+      +   Y  L S
Sbjct: 406 AEEL---IENMPVKPNAAIWGALLNACHIHGNLELGKQI-GKILIQVDPGHGGRYIHLAS 461

Query: 533 MYSRCANVEAAFQVFKEMEDRNV 555
           +++       A +V ++M+++ V
Sbjct: 462 IHAAAGEWNQAARVRRQMKEQGV 484



 Score =  137 bits (344), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 108/464 (23%), Positives = 210/464 (45%), Gaps = 35/464 (7%)

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
           +++ CSN E +     I+G +LK G    ++     L       S  L  A  VFD++  
Sbjct: 24  LLQRCSNMEEL---RQIHGQMLKTGLILDEIPASKLLAFCASPNSGSLAYARTVFDRIFR 80

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
            NT  W  MI   +    P +A+ L+  M+      + +T   ++ ACS +      +Q+
Sbjct: 81  PNTFMWNTMIRGYSNSKEPEEALLLYHHMLYHSVPHNAYTFPFLLKACSSMSASEETQQI 140

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKC-----------TVD-----------------GSV 337
           H+  I+ G   ++    SL+++Y+K             VD                 G +
Sbjct: 141 HAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQVDQRDTVSWNSMIDGYTKCGEI 200

Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           + + ++F+ M + N++SWT++I+G V   G+ KEA+ LF  M    +  ++    S L+A
Sbjct: 201 EMAYEIFNHMPERNIISWTSMISGCV-GAGKPKEALNLFHRMQTAGIKLDNVALVSTLQA 259

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C +L   +  + ++ +  K    +D  +G  LI MYA+ G +E+A + F  + EK +  +
Sbjct: 260 CADLGVLDQGKWIHAYIKKHEIEIDPILGCVLIDMYAKCGDLEEAIEVFRKMEEKGVSVW 319

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
             M+  YA +    +A E   +++  GV  +  TF  +L+  S  G + + + +   + +
Sbjct: 320 TAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGILTACSHAGLVHEAKLLFESMER 379

Query: 518 -SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVISWTSMITGFAKHGFAARAL 575
             GF+ +   Y  ++ +  R   ++ A ++ + M  + N   W +++     HG      
Sbjct: 380 IHGFKPSIEHYGCMVDLLGRAGLLKEAEELIENMPVKPNAAIWGALLNACHIHGNLELGK 439

Query: 576 EIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDE 619
           +I  K+L      +G  YI + S  + AG  ++  +  R M ++
Sbjct: 440 QIG-KILIQVDPGHGGRYIHLASIHAAAGEWNQAARVRRQMKEQ 482



 Score =  110 bits (275), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 119/256 (46%), Gaps = 32/256 (12%)

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM 139
           T+  LLK+C         + +H+ + +          NSL+++YSK GD+  A  +F  +
Sbjct: 120 TFPFLLKACSSMSASEETQQIHAHIIKMGFGSEIYTTNSLLNVYSKSGDIKSARLLFDQV 179

Query: 140 GNK------------------------------RDIVSWSSMISSYVNRGKQVDAIHMFV 169
             +                              R+I+SW+SMIS  V  GK  +A+++F 
Sbjct: 180 DQRDTVSWNSMIDGYTKCGEIEMAYEIFNHMPERNIISWTSMISGCVGAGKPKEALNLFH 239

Query: 170 EMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
            M   G   +     + ++AC++   +  G  I+ ++ K    + D  +GC LIDM+ K 
Sbjct: 240 RMQTAGIKLDNVALVSTLQACADLGVLDQGKWIHAYIKK-HEIEIDPILGCVLIDMYAKC 298

Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
             DLE A +VF KM EK    WT MI+     G  R+A+  F+ M  +G  P++ T +G+
Sbjct: 299 G-DLEEAIEVFRKMEEKGVSVWTAMISGYAIHGRGREALEWFMKMQTAGVEPNQMTFTGI 357

Query: 290 VSACSELELFTSGKQL 305
           ++ACS   L    K L
Sbjct: 358 LTACSHAGLVHEAKLL 373



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 108/206 (52%), Gaps = 9/206 (4%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLL--LKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
           G+ ++A+     M   G    LD  +L+  L++C        GK +H+ + + ++E + +
Sbjct: 229 GKPKEALNLFHRMQTAG--IKLDNVALVSTLQACADLGVLDQGKWIHAYIKKHEIEIDPI 286

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           +   LI +Y+KCGDL EA ++F+ M  ++ +  W++MIS Y   G+  +A+  F++M   
Sbjct: 287 LGCVLIDMYAKCGDLEEAIEVFRKM-EEKGVSVWTAMISGYAIHGRGREALEWFMKMQTA 345

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVKGSVDL 233
           G  PN+  F+ ++ ACS+   V    +++  + +  G+  S    GC ++D+  +  + L
Sbjct: 346 GVEPNQMTFTGILTACSHAGLVHEAKLLFESMERIHGFKPSIEHYGC-MVDLLGRAGL-L 403

Query: 234 ESAYKVFDKMTEK-NTVGWTLMITRC 258
           + A ++ + M  K N   W  ++  C
Sbjct: 404 KEAEELIENMPVKPNAAIWGALLNAC 429


>gi|413932901|gb|AFW67452.1| hypothetical protein ZEAMMB73_642603 [Zea mays]
          Length = 853

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 226/722 (31%), Positives = 405/722 (56%), Gaps = 8/722 (1%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           PD  T   ++KSC       LG+LVH       L  +  + ++L+ +Y+  G L  A   
Sbjct: 139 PDAHTLPYVVKSCAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDA 198

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  +  +RD V W+ M+   +  G    A+ +F  M   G  PN    +  +  C+   +
Sbjct: 199 FDGI-PERDCVLWNVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDAD 257

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
           +  G  ++   +KCG  + +V V   L+ M+ K    L+ A+++F+ M + + V W  MI
Sbjct: 258 LLSGAQLHSLAVKCG-LEPEVAVANTLLAMYAKCQC-LDDAWRLFELMPQDDLVTWNGMI 315

Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
           + C Q G   +A  LF DM  SG  PD  TL  ++ A ++L     GK++H + +R  + 
Sbjct: 316 SGCVQNGLFVEAFGLFYDMQRSGARPDSITLVSLLPALTDLNGLKQGKEVHGYIVRNCVN 375

Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
           +DV +  +LVD+Y KC     V  ++ ++D     +V+  + +I+GYV +G   +EA+++
Sbjct: 376 MDVFLVSALVDIYFKCR---DVRMAQNLYDAARAIDVVIGSTMISGYVLNG-MSEEALQM 431

Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
           F  +++  + PN  T ASVL  C ++    + +Q++ + ++        V ++L+ MYA+
Sbjct: 432 FRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYERKCYVESALMDMYAK 491

Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
            GR++ +   F  + +K+ V++N+M+ ++++N   ++A +L  ++   G+  +  T ++ 
Sbjct: 492 CGRLDLSHYIFLKMSQKDEVTWNSMISSFSQNGKPQEALDLFRQMCMEGIKYNNITISAA 551

Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
           LS  +S+ AI  G++IH   IK   +++    +ALI MY++C N+E A +VF+ M D+N 
Sbjct: 552 LSACASLPAIYYGKEIHGVTIKGPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNE 611

Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
           +SW S+I+ +  HG    ++ + + M  +G KP+ +T++A++SAC+HAGL+ EG + F+ 
Sbjct: 612 VSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQC 671

Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
           M  ++ I  RMEH+ACMVDL  RSG L +A++FI  MP   D  +W   L ACRVH + E
Sbjct: 672 MTKKYLIAPRMEHFACMVDLYSRSGKLDKAIQFIADMPFKPDAGIWGALLHACRVHRNVE 731

Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
           L   A++ + + DP +   ++L+SN+ A AG W+ V+ +R+ MK+  ++K  G SW++ +
Sbjct: 732 LADIASQELFKLDPANSGYYVLMSNINAVAGRWDGVSKVRRLMKDNKILKIPGYSWVDVN 791

Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSE 795
           N  H F   + SHP++ +IY  L  L  +++E GY+P  +   H +  +   Q  F+  +
Sbjct: 792 NSSHLFVASDKSHPESEDIYTSLKTLLQELREEGYVPRPDLC-HPMHPDNNTQVEFKKYK 850

Query: 796 KI 797
           +I
Sbjct: 851 EI 852



 Score =  208 bits (529), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 254/495 (51%), Gaps = 8/495 (1%)

Query: 57  GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
           G V  A+     M   G  P+  T +  L  C    +   G  +HSL  +  LEP   + 
Sbjct: 221 GDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVKCGLEPEVAVA 280

Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
           N+L+++Y+KC  L++A ++F+ M  + D+V+W+ MIS  V  G  V+A  +F +M   G 
Sbjct: 281 NTLLAMYAKCQCLDDAWRLFELM-PQDDLVTWNGMISGCVQNGLFVEAFGLFYDMQRSGA 339

Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
            P+     +++ A ++   +  G  ++G++++    + DV +  AL+D++ K   D+  A
Sbjct: 340 RPDSITLVSLLPALTDLNGLKQGKEVHGYIVR-NCVNMDVFLVSALVDIYFKCR-DVRMA 397

Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
             ++D     + V  + MI+     G   +A+++F  ++     P+  T++ V+  C+ +
Sbjct: 398 QNLYDAARAIDVVIGSTMISGYVLNGMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASM 457

Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
                G+Q+H + +R        V  +L+DMYAKC   G +D S  +F +M   + ++W 
Sbjct: 458 AALPLGQQIHGYVLRNAYERKCYVESALMDMYAKC---GRLDLSHYIFLKMSQKDEVTWN 514

Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           ++I+ + Q+ G+ +EA+ LF  M    +  N+ T ++ L AC +L      ++++   +K
Sbjct: 515 SMISSFSQN-GKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIK 573

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                D    ++LI MYA+ G +E A + FE + +KN VS+N+++ AY  +   +++  L
Sbjct: 574 GPIKADIFAESALIDMYAKCGNLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSL 633

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA-LISMYS 535
           LH +++ G      TF +L+S  +  G + +G Q+   + K    +    + A ++ +YS
Sbjct: 634 LHGMQEEGYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYS 693

Query: 536 RCANVEAAFQVFKEM 550
           R   ++ A Q   +M
Sbjct: 694 RSGKLDKAIQFIADM 708



 Score =  134 bits (336), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 162/332 (48%), Gaps = 12/332 (3%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALD---VCVGCSLVDMYAKCTVDGSVDDSRK 342
           L  V+  C        G Q+H+ A+ +G   D   + +   L+ MY    +     D+  
Sbjct: 35  LLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMY---VLARRFRDAVA 91

Query: 343 VFD---RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP--NHFTFASVLKA 397
           VF    R    + + W  +I G+  + G+   AV  +  M     AP  +  T   V+K+
Sbjct: 92  VFSALPRAAAASSLPWNWLIRGFT-AAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVKS 150

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C  L   ++   V+  A   G A D  VG++L+ MYA +G + +AR AF+ + E++ V +
Sbjct: 151 CAALGAMSLGRLVHRTARAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIPERDCVLW 210

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
           N M+D   K  + + A  L   +  +G   +  T A  LS  ++   +  G Q+H+  +K
Sbjct: 211 NVMMDGCIKAGDVDGAVRLFRNMRASGCEPNFATLACFLSVCATDADLLSGAQLHSLAVK 270

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
            G E    + N L++MY++C  ++ A+++F+ M   ++++W  MI+G  ++G    A  +
Sbjct: 271 CGLEPEVAVANTLLAMYAKCQCLDDAWRLFELMPQDDLVTWNGMISGCVQNGLFVEAFGL 330

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
           FY M   G +P+ IT +++L A +    + +G
Sbjct: 331 FYDMQRSGARPDSITLVSLLPALTDLNGLKQG 362



 Score =  125 bits (315), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 80/254 (31%), Positives = 132/254 (51%), Gaps = 4/254 (1%)

Query: 52  YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEP 111
           Y LN G  ++A+     + ++   P+  T + +L  C       LG+ +H  + R+  E 
Sbjct: 419 YVLN-GMSEEALQMFRYLLEQCIKPNAVTIASVLPGCASMAALPLGQQIHGYVLRNAYER 477

Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
              + ++L+ +Y+KCG L+ ++ IF  M  K D V+W+SMISS+   GK  +A+ +F +M
Sbjct: 478 KCYVESALMDMYAKCGRLDLSHYIFLKMSQK-DEVTWNSMISSFSQNGKPQEALDLFRQM 536

Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
              G   N    SA + AC++   +  G  I+G  +K G   +D+    ALIDM+ K   
Sbjct: 537 CMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIK-GPIKADIFAESALIDMYAKCG- 594

Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
           +LE A +VF+ M +KN V W  +I+     G  ++++ L   M   G+ PD  T   ++S
Sbjct: 595 NLELALRVFEFMPDKNEVSWNSIISAYGAHGLVKESVSLLHGMQEEGYKPDHVTFLALIS 654

Query: 292 ACSELELFTSGKQL 305
           AC+   L   G QL
Sbjct: 655 ACAHAGLVEEGVQL 668



 Score = 72.0 bits (175), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 101/205 (49%), Gaps = 3/205 (1%)

Query: 55  NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
            +G+ Q+A+     M  +G   +  T S  L +C      + GK +H +  +  ++ +  
Sbjct: 522 QNGKPQEALDLFRQMCMEGIKYNNITISAALSACASLPAIYYGKEIHGVTIKGPIKADIF 581

Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
             ++LI +Y+KCG+L  A ++F+ M +K + VSW+S+IS+Y   G   +++ +   M E 
Sbjct: 582 AESALIDMYAKCGNLELALRVFEFMPDKNE-VSWNSIISAYGAHGLVKESVSLLHGMQEE 640

Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
           G+ P+   F A+I AC++   V  G  ++  + K       +     ++D++ + S  L+
Sbjct: 641 GYKPDHVTFLALISACAHAGLVEEGVQLFQCMTKKYLIAPRMEHFACMVDLYSR-SGKLD 699

Query: 235 SAYKVFDKMTEKNTVG-WTLMITRC 258
            A +    M  K   G W  ++  C
Sbjct: 700 KAIQFIADMPFKPDAGIWGALLHAC 724



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 48/197 (24%), Positives = 82/197 (41%), Gaps = 10/197 (5%)

Query: 487 TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNH---CIYNALISMY---SRCANV 540
           +SA    ++L G  S   +  G QIHAR + SG  S+H    ++  L+ MY    R  + 
Sbjct: 30  SSADRLLAVLRGCVSAPHLPLGLQIHARAVVSGALSDHNHLALHTRLLGMYVLARRFRDA 89

Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD--GIKPNGITYIAVLS 598
            A F         + + W  +I GF   G    A+  + KM +      P+  T   V+ 
Sbjct: 90  VAVFSALPRAAAASSLPWNWLIRGFTAAGQHHLAVLFYVKMWSHPAAPSPDAHTLPYVVK 149

Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
           +C+  G +S G    R+     G+   +   + +V +   +G L  A +    +P   D 
Sbjct: 150 SCAALGAMSLGRLVHRTA-RAIGLANDVYVGSALVKMYADAGLLGNARDAFDGIP-ERDC 207

Query: 659 LVWRTFLGACRVHGDTE 675
           ++W   +  C   GD +
Sbjct: 208 VLWNVMMDGCIKAGDVD 224


>gi|222626139|gb|EEE60271.1| hypothetical protein OsJ_13308 [Oryza sativa Japonica Group]
          Length = 758

 Score =  426 bits (1095), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 241/765 (31%), Positives = 414/765 (54%), Gaps = 14/765 (1%)

Query: 104 LTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVD 163
           + R+   P   + N+L++LY +CGD+  A  +F  M  +RD VSW+++I+ Y   G    
Sbjct: 1   MLRAAYRPGLFLRNNLLALYCRCGDMRHARLLFDGM-PRRDAVSWNTLIAGYSGLGSCRL 59

Query: 164 AIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
           A+  F +    G   + + F+A + +C+   +   G +++G  +  G   +      ++I
Sbjct: 60  ALDAFRDARASGDGVDRFTFAAALASCARVGDWRDGRVVHGLAVVSGLARTAFLTN-SVI 118

Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
           DM+ K  + ++    +FD+  E+    W L+++   ++G P  A+ + + M  SG   D 
Sbjct: 119 DMYAKCGM-IDEVRLLFDRAEERGEASWNLLLSAYVRMGWPEVAVNVLVWMHRSGVKLDS 177

Query: 284 FTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
           F L G++ ACSEL +     + LHS  ++ GL LDV VG ++VDMYAK   +G ++++ K
Sbjct: 178 FALGGILKACSELGDSEDVRRMLHSCVVKVGLDLDVFVGSAMVDMYAK---NGGLEEAIK 234

Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRD-----KEAVKLFSDMIQGQVAPNHFTFASVLKA 397
           VFD + + NV+ + A+I G+ + G         EAV LFS+M++ ++ P+ FTF SVL+ 
Sbjct: 235 VFDCIPNQNVVVYNAMIAGFARLGNDPCPEIRIEAVTLFSNMLKKRIKPSKFTFKSVLEV 294

Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
           C          Q++ H +  G   D+ + + LI++Y+++  + D+ + F+   ++++  +
Sbjct: 295 CNLTNAVRCGRQIHAHVILSGLQGDEFIASVLINLYSKARCVNDSLRCFDMTVKEDVFIW 354

Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
            +M+ A+ +N + EKA  L  E+  T  GT  +T +S++S  +++      +QIH   +K
Sbjct: 355 TSMITAFVQNEHFEKALYLFRELLYTRKGTDQFTISSVMSACAALSVPTTCKQIHCHAVK 414

Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
           +G +      N+ I+MY    +++A+ Q F+++   +  SW++MI  +A HG+ ++ALE+
Sbjct: 415 TGLDQFTVSGNSQIAMYRNIGDLKASKQTFEQISCLDTFSWSAMILSYAVHGYESKALEL 474

Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
           F KM   G+  N    +A L ACSH GL  EG +++ +   + G    ++  ACMVDLLG
Sbjct: 475 FEKMKNLGVMMNESASLAALIACSHQGLGDEGLRYYENTIPDDGFSLDVKLKACMVDLLG 534

Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
           R G + +A +FI S     D ++W   L ACRVHGD E      E ++E +P   +++++
Sbjct: 535 RVGKIADAEDFIMSSGSENDPILWHALLRACRVHGDKERCTKIGEKLMELEPFSASSYVM 594

Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
           L NLY  AG        R  M+ER +  EAG SW +    +H F  G+ S      I+  
Sbjct: 595 LYNLYMDAGKISLAMRTRGLMRERGISNEAGISWTDFGGSIHNFIDGDNSCSHN-TIHTT 653

Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQ-YLFQHSEKIAVAFGLISTSKSKPIRVFK 816
           L++L +++K+      TN    E +  +  +  + +H E +AVAFGL +     P+RV K
Sbjct: 654 LEELLVRVKQKTEHGGTNIWELEFQSRKLSESSISRHGELLAVAFGLTTLPSVAPVRVMK 713

Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           N R+  + H  +K +S    REI +RD   FHH   G CSC  YW
Sbjct: 714 NQRISWESHETLKLLSEGENREITVRDPTHFHHFTRGSCSCRGYW 758



 Score =  211 bits (536), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 157/562 (27%), Positives = 283/562 (50%), Gaps = 24/562 (4%)

Query: 73  GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
           G+  D  T++  L SC R  ++  G++VH L   S L   + + NS+I +Y+KCG ++E 
Sbjct: 71  GDGVDRFTFAAALASCARVGDWRDGRVVHGLAVVSGLARTAFLTNSVIDMYAKCGMIDEV 130

Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS- 191
             +F     +R   SW+ ++S+YV  G    A+++ V M   G   + +    +++ACS 
Sbjct: 131 RLLFDR-AEERGEASWNLLLSAYVRMGWPEVAVNVLVWMHRSGVKLDSFALGGILKACSE 189

Query: 192 --NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTV 249
             ++E+V    +++  ++K G  D DV VG A++DM+ K    LE A KVFD +  +N V
Sbjct: 190 LGDSEDVR--RMLHSCVVKVG-LDLDVFVGSAMVDMYAKNG-GLEEAIKVFDCIPNQNVV 245

Query: 250 GWTLMITRCTQLG---CPR---DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
            +  MI    +LG   CP    +A+ LF +M+     P +FT   V+  C+       G+
Sbjct: 246 VYNAMIAGFARLGNDPCPEIRIEAVTLFSNMLKKRIKPSKFTFKSVLEVCNLTNAVRCGR 305

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
           Q+H+  I +GL  D  +   L+++Y+K      V+DS + FD  +  +V  WT++IT +V
Sbjct: 306 QIHAHVILSGLQGDEFIASVLINLYSKARC---VNDSLRCFDMTVKEDVFIWTSMITAFV 362

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
           Q+   +K A+ LF +++  +   + FT +SV+ AC  L      +Q++ HAVK G     
Sbjct: 363 QNEHFEK-ALYLFRELLYTRKGTDQFTISSVMSACAALSVPTTCKQIHCHAVKTGLDQFT 421

Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
             GNS I+MY   G ++ +++ FE +   +  S++ M+ +YA +    KA EL  ++++ 
Sbjct: 422 VSGNSQIAMYRNIGDLKASKQTFEQISCLDTFSWSAMILSYAVHGYESKALELFEKMKNL 481

Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANV-E 541
           GV  +     + L   S  G   +G + +   I   GF  +  +   ++ +  R   + +
Sbjct: 482 GVMMNESASLAALIACSHQGLGDEGLRYYENTIPDDGFSLDVKLKACMVDLLGRVGKIAD 541

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP-NGITYIAVLSAC 600
           A   +     + + I W +++     HG   R  +I  K++   ++P +  +Y+ + +  
Sbjct: 542 AEDFIMSSGSENDPILWHALLRACRVHGDKERCTKIGEKLME--LEPFSASSYVMLYNLY 599

Query: 601 SHAGLISEGWKHFRSMYDEHGI 622
             AG IS   +  R +  E GI
Sbjct: 600 MDAGKISLAMRT-RGLMRERGI 620



 Score = 79.0 bits (193), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 68/271 (25%), Positives = 128/271 (47%), Gaps = 4/271 (1%)

Query: 61  KAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLI 120
           +A+     M +K   P   T+  +L+ C  +     G+ +H+ +  S L+ +  I + LI
Sbjct: 268 EAVTLFSNMLKKRIKPSKFTFKSVLEVCNLTNAVRCGRQIHAHVILSGLQGDEFIASVLI 327

Query: 121 SLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNE 180
           +LYSK   +N++ + F  M  K D+  W+SMI+++V       A+++F E+L      ++
Sbjct: 328 NLYSKARCVNDSLRCF-DMTVKEDVFIWTSMITAFVQNEHFEKALYLFRELLYTRKGTDQ 386

Query: 181 YCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVF 240
           +  S+V+ AC+          I+   +K G  D     G + I M+ +   DL+++ + F
Sbjct: 387 FTISSVMSACAALSVPTTCKQIHCHAVKTG-LDQFTVSGNSQIAMY-RNIGDLKASKQTF 444

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
           ++++  +T  W+ MI      G    A+ LF  M   G + +       + ACS   L  
Sbjct: 445 EQISCLDTFSWSAMILSYAVHGYESKALELFEKMKNLGVMMNESASLAALIACSHQGLGD 504

Query: 301 SGKQLHSWAI-RTGLALDVCVGCSLVDMYAK 330
            G + +   I   G +LDV +   +VD+  +
Sbjct: 505 EGLRYYENTIPDDGFSLDVKLKACMVDLLGR 535


>gi|224065723|ref|XP_002301939.1| predicted protein [Populus trichocarpa]
 gi|222843665|gb|EEE81212.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 214/576 (37%), Positives = 342/576 (59%), Gaps = 3/576 (0%)

Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
           +S +++A S     +  + LH   I++       +G  LV  Y +    G   D+ ++FD
Sbjct: 41  VSALITAISTCSSISYCRALHCRVIKSVNYNHGFIGDQLVSSYVEL---GCTKDALELFD 97

Query: 346 RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
            + D +++SW ++I+G+ +          LF    +  + PN  T   V+ AC  + + +
Sbjct: 98  ELPDKDLVSWNSLISGFSRRADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELD 157

Query: 406 VAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYA 465
           V + ++  AVK G  L+  V NSLI++Y + G +E A   FE +  ++LVS+N+MV  + 
Sbjct: 158 VGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLEAACCLFEGMSVQSLVSWNSMVAVHV 217

Query: 466 KNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
               +EK       +   G+ +   T  SLL    ++G     E +H  I+  G + N  
Sbjct: 218 HMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLA 277

Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
           I  AL+ +Y++   +  + +VF  M + + ++WT+M++ +A HG    A+E F  M+ +G
Sbjct: 278 IATALLDLYAKLGTLSDSCKVFGGMINPDAVAWTAMLSSYAMHGRGREAIEHFELMVREG 337

Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
           + P+ +T+  +LSACSH+GL+ EG  +F+ MY+ +G+  R+EHY+CMVDLLGRSG L +A
Sbjct: 338 VVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYSCMVDLLGRSGHLNDA 397

Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
            + I+SMP+  +  VW   +GACRV G+ ELGK  AE +   DP D   +I LSN+Y++A
Sbjct: 398 YKLIKSMPMEPNSGVWGALIGACRVRGNIELGKEVAERLFSLDPSDSRNYITLSNMYSAA 457

Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
           G W   + +R  MKER LI+  GCS+IE  NK+H F +G+ SHP T +IY +L++L  K 
Sbjct: 458 GQWRDASKVRALMKERVLIRNPGCSYIEHGNKIHCFVMGDQSHPDTEQIYNKLEELVRKN 517

Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
           +E G+   T +VLH+++EE K   + +HSEK+A+AFGL+ T+   P+ + KN+R+CGDCH
Sbjct: 518 REVGFASKTEYVLHDVDEEVKEDLINKHSEKLAIAFGLLVTNAGMPLIITKNIRICGDCH 577

Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
              K IS++  R I++RD+ RFHH  +G CSC DYW
Sbjct: 578 GFAKLISLIEKRTIIIRDTKRFHHFTNGLCSCGDYW 613



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 221/465 (47%), Gaps = 52/465 (11%)

Query: 98  KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
           + +H  + +S    +  I + L+S Y + G   +A ++F  + +K D+VSW+S+IS +  
Sbjct: 58  RALHCRVIKSVNYNHGFIGDQLVSSYVELGCTKDALELFDELPDK-DLVSWNSLISGFSR 116

Query: 158 RGKQVDAIHMFVEM-LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
           R      + +   M  E+G  PNE     V+ AC+    + +G  I+G  +K G    +V
Sbjct: 117 RADLGICLGLLFRMRFEMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGML-LEV 175

Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMIL 276
            V  +LI+++ K    LE+A  +F+ M+ ++ V W  M+     +G     I  F+ M  
Sbjct: 176 KVVNSLINLYGKCGC-LEAACCLFEGMSVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRR 234

Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
           +G   D+ T+  ++ AC  L +    + +H + +  GL  ++ +  +L+D+YAK    G+
Sbjct: 235 AGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGNLAIATALLDLYAKL---GT 291

Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
           + DS KVF  M++ + ++WTA+++ Y    GR +EA++ F  M++  V P+H TF  +L 
Sbjct: 292 LSDSCKVFGGMINPDAVAWTAMLSSYAMH-GRGREAIEHFELMVREGVVPDHVTFTHLLS 350

Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
           AC                                   + SG +E+ +  F+ ++E   V 
Sbjct: 351 AC-----------------------------------SHSGLVEEGKNYFKIMYEFYGVE 375

Query: 457 -----YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
                Y+ MVD   ++ +   A++L   I+   +  ++  + +L+      G I  G+++
Sbjct: 376 LRVEHYSCMVDLLGRSGHLNDAYKL---IKSMPMEPNSGVWGALIGACRVRGNIELGKEV 432

Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
             R+  S   S+   Y  L +MYS       A +V   M++R +I
Sbjct: 433 AERLF-SLDPSDSRNYITLSNMYSAAGQWRDASKVRALMKERVLI 476



 Score =  119 bits (297), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 165/342 (48%), Gaps = 17/342 (4%)

Query: 71  QKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLN 130
           + G  P+  T   ++ +C       +GK +H +  +S +     ++NSLI+LY KCG L 
Sbjct: 133 EMGLKPNEVTVIPVVSACAGVGELDVGKCIHGIAVKSGMLLEVKVVNSLINLYGKCGCLE 192

Query: 131 EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRAC 190
            A  +F+ M + + +VSW+SM++ +V+ G     I  F+ M   G   ++    +++ AC
Sbjct: 193 AACCLFEGM-SVQSLVSWNSMVAVHVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLAC 251

Query: 191 SNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG 250
            N     +   ++G++L  G  D ++ +  AL+D++ K    L  + KVF  M   + V 
Sbjct: 252 ENLGVRKLAEAVHGYILN-GGLDGNLAIATALLDLYAKLGT-LSDSCKVFGGMINPDAVA 309

Query: 251 WTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAI 310
           WT M++     G  R+AI  F  M+  G +PD  T + ++SACS   L   GK       
Sbjct: 310 WTAMLSSYAMHGRGREAIEHFELMVREGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMY 369

Query: 311 R-TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAII-----TGYV 363
              G+ L V     +VD+  +    G ++D+ K+   M ++ N   W A+I      G +
Sbjct: 370 EFYGVELRVEHYSCMVDLLGR---SGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRGNI 426

Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
           + G    E  +LFS  +    + N+ T +++  A G   D++
Sbjct: 427 ELGKEVAE--RLFS--LDPSDSRNYITLSNMYSAAGQWRDAS 464



 Score = 82.0 bits (201), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 17/218 (7%)

Query: 53  HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
           H++ G  +K I    +M + G + D  T   LL +C       L + VH  +    L+ N
Sbjct: 216 HVHMGLAEKGIGYFIMMRRAGINSDQATVVSLLLACENLGVRKLAEAVHGYILNGGLDGN 275

Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
             I  +L+ LY+K G L+++ K+F  M N  D V+W++M+SSY   G+  +AI  F  M+
Sbjct: 276 LAIATALLDLYAKLGTLSDSCKVFGGMINP-DAVAWTAMLSSYAMHGRGREAIEHFELMV 334

Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIG-------HIIYGFLLKCGYFDSDVCVGCALIDM 225
             G  P+   F+ ++ ACS++  V  G       +  YG  L+  ++         ++D+
Sbjct: 335 REGVVPDHVTFTHLLSACSHSGLVEEGKNYFKIMYEFYGVELRVEHYS-------CMVDL 387

Query: 226 FVKGSVDLESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
             + S  L  AYK+   M  E N+  W  +I  C   G
Sbjct: 388 LGR-SGHLNDAYKLIKSMPMEPNSGVWGALIGACRVRG 424


>gi|357132372|ref|XP_003567804.1| PREDICTED: pentatricopeptide repeat-containing protein At4g01030,
           mitochondrial-like [Brachypodium distachyon]
          Length = 851

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 266/901 (29%), Positives = 446/901 (49%), Gaps = 107/901 (11%)

Query: 12  IPPPSSF---KPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDL 68
           +P P SF     + PSR     + SP F+A  T   PLSN  +   +    + A   L L
Sbjct: 7   LPAPPSFLHHHRARPSR-----ARSPTFLAVET---PLSN--VAADSPSSFRDARLLLSL 56

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS---KLEPNSVILNSLISLYSK 125
           + Q G+   LD       S +R+    L   +HSL  R+     EP   +  +L  L ++
Sbjct: 57  LRQCGDMICLDEEDT--GSSLRAAR-RLAPQLHSLAVRAGHATREPR--VACALSDLLAR 111

Query: 126 CGDLNEANKIFK----SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
            G    + ++ +    S G K D V W+  ++     G+  +AI  F EM   G   + Y
Sbjct: 112 LGRGPSSRRLLEEADESEGGK-DAVLWNKQVAMLAEAGEWDEAIGAFREMQARGVAADGY 170

Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
             + V+ AC        G  ++   LK G  D+   V   L  M+ +G+ D+ +A  V  
Sbjct: 171 ALARVLHACGRAAARREGKAVHAHALKAGLVDAHPLVPGFLAGMYAEGA-DVAAATAVLL 229

Query: 242 KMT------------------------------------EKNTVGWTLMITRCTQLGCPR 265
           + T                                    E     W  +++ C + G  R
Sbjct: 230 RATPPPRSVAWDAVVACCVRLGLVDDAMELAGRMARDGPEPTLATWNAVLSGCARHGRDR 289

Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
           +A+ +   M+  G  PD  T+S ++ + +   +   G ++H + +R GL  D   G +LV
Sbjct: 290 EALAVLRRMLEQGLWPDATTVSSLLKSVANAGMVRHGMEVHCFFLRHGLVPDAYTGTALV 349

Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
           DMYAKC   G +D +R+VFD +   N+ +W +++ G+  +G + + A++L   M + ++ 
Sbjct: 350 DMYAKC---GRLDCARRVFDTLEHRNLATWNSLVAGHAYAG-QFEAALELVERMKRNRLD 405

Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA--- 442
           PN  T+                                   N LI+ Y+ +G    A   
Sbjct: 406 PNVTTW-----------------------------------NGLITGYSLNGLSSQAMLL 430

Query: 443 -RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
            R+   +    N+VS+ +++     N   E +F    E++  GV  S  T   LL   + 
Sbjct: 431 LRQIKAAGLTPNVVSWTSLISGSCHNGEYEDSFNFFKEMQKDGVQPSLVTMLVLLRACAG 490

Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
           +  + KG+++H   ++  ++ +  +  ALI MYS+  ++ +A ++F  ++++N++   +M
Sbjct: 491 LALLKKGKELHCFALRRAYDCDMVVGTALIDMYSKAGSLTSAKRIFGRIQNKNLVCCNAM 550

Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
           +TG A HG +  A+ +F+ +   G+KP+ IT+ A+L+AC   GLI+EGW++F +M  ++G
Sbjct: 551 LTGLAVHGQSHEAITLFHDLWRSGLKPDSITFTALLTACRSMGLITEGWEYFDNMETKYG 610

Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
           +V   E+YACMVDLL RSG L EA+  I   P+     +W   L  C +HG+ +L + AA
Sbjct: 611 VVPTAENYACMVDLLARSGYLDEAMALIERSPVDPGASLWGALLTGCSIHGNLDLAEVAA 670

Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
             +   +P + A ++++ +LY     ++   +++  MK R +    G SWI+ +  +H F
Sbjct: 671 RNLFRLEPYNSANYLMIMSLYEHEQMYDEADSLKYAMKARGVNTRPGWSWIQIEQGIHVF 730

Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
            V  + HP+T EI  EL  L  +IK  GY+PDT+ V++ + EE+K + L  H+EK+A+ +
Sbjct: 731 EVDGSPHPETAEICEELMSLVRQIKMTGYVPDTSCVVYNVPEEEKEKLLLCHTEKLAITY 790

Query: 802 GLISTSKSK-PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
           GLI +  S+ P+RV KN R+C DCH   K+IS + GR+I+LRD+ RFHH  DG CSCNDY
Sbjct: 791 GLIHSDASRMPVRVIKNTRMCSDCHEVAKHISALCGRQIILRDAVRFHHFVDGNCSCNDY 850

Query: 861 W 861
           W
Sbjct: 851 W 851


>gi|414865780|tpg|DAA44337.1| TPA: hypothetical protein ZEAMMB73_255594 [Zea mays]
          Length = 665

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 233/625 (37%), Positives = 350/625 (56%), Gaps = 42/625 (6%)

Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSELEL 298
           D  +   TV + ++I   T     RDA+ LF  M   G    PD +T    + +CS  + 
Sbjct: 79  DGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHYTYPLALKSCSASKD 138

Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
              G Q+HS   +  L  +V V  S + MY++C   G  +D+ +VFD M   +V+SW A+
Sbjct: 139 LLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRC---GRPEDAYRVFDGMPHRDVVSWNAM 195

Query: 359 ITGYVQSGGRDKEAVKLFSDMI--QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
           I G+ + G  D+ A+++F   +  QG + P+  T A +L A GN                
Sbjct: 196 IAGFARVGLFDR-AIEVFKQFVVLQGSM-PDAGTMAGILPAMGN---------------- 237

Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
                            A+   +   R+ F+++  K L+S+N M+  YA N    KA EL
Sbjct: 238 -----------------AKPDDIRFVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVEL 280

Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
              +E   V   + T A++L     + A   G++IH  I +     N  + NAL+ MY+ 
Sbjct: 281 FMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMCPNLLLENALMDMYAS 340

Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
           C  ++ A ++F  M  R+VISWTS+I+ + KHG    A+++F KML  G++P+ I ++AV
Sbjct: 341 CGCLKDAREIFDLMSARDVISWTSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAV 400

Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSA 656
           L+ACSHAGL+++G  +F SM   + I+ + EHY CMVDLLGR+G + EA +FI +M +  
Sbjct: 401 LAACSHAGLLADGKHYFDSMTSRYHIIPKAEHYTCMVDLLGRAGCINEAYDFITTMLIEP 460

Query: 657 DVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
           +  VW   L ACR+H + ++G  AA+ +    P+    ++LLSN+YA AG W  V ++R 
Sbjct: 461 NERVWGALLQACRIHSNMDIGLVAADNLFSLVPEQTGYYVLLSNMYARAGRWADVTSVRS 520

Query: 717 RMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNF 776
            M  + + K  G S +E  ++VH FH+G+  HP++  IY +LD+L  KI+  GY P+   
Sbjct: 521 VMVNKGIKKFPGTSIVELGDQVHTFHIGDRCHPQSEMIYHKLDELLGKIRGMGYNPEVEA 580

Query: 777 VLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTG 836
            LH++EEE K  +L  HSEK+A+AF L++TS    IRV  NLR C DCH A K IS++T 
Sbjct: 581 TLHDVEEEDKEDHLSVHSEKLAIAFLLLNTSPGTIIRVTMNLRTCSDCHLAAKLISIITC 640

Query: 837 REIVLRDSNRFHHIKDGKCSCNDYW 861
           REIVL+D+NR HHI  G CSC DYW
Sbjct: 641 REIVLKDTNRIHHIVQGVCSCGDYW 665



 Score =  132 bits (333), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 117/492 (23%), Positives = 217/492 (44%), Gaps = 85/492 (17%)

Query: 119 LISLYSKCGDLNEANKIFKSMG----NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
           LI  Y+ C  L  A+ + +S      ++   V ++ +I +        DA+ +F  M   
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 175 GFC--PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
           G    P+ Y +   +++CS ++++ +G  I+  + K    D +V V  + I M+ +    
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKL-RLDRNVYVAHSAISMYSRCGRP 174

Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLD-MILSGFLPDRFTLSGVVS 291
            E AY+VFD M  ++ V W  MI    ++G    AI +F   ++L G +PD  T++G++ 
Sbjct: 175 -EDAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILP 233

Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD---SRKVFDRML 348
           A                                         +   DD    R+VFD M 
Sbjct: 234 AMG---------------------------------------NAKPDDIRFVRRVFDNMQ 254

Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
              ++SW A++  Y  +    K AV+LF  M + +V P+  T A+VL  CG L   +V +
Sbjct: 255 FKELISWNAMLAVYANNEFHVK-AVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGK 313

Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
           +++    ++    +  + N+L+ MYA  G ++DAR+ F+ +  ++++S+ +++ AY K+ 
Sbjct: 314 RIHEIIKRKNMCPNLLLENALMDMYASCGCLKDAREIFDLMSARDVISWTSIISAYGKHG 373

Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
           +  +A +L  ++   G+   +  F ++L+  S  G +  G        K  F+       
Sbjct: 374 HGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADG--------KHYFD------- 418

Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
              SM SR       + +  + E      +T M+    + G    A +    ML   I+P
Sbjct: 419 ---SMTSR-------YHIIPKAE-----HYTCMVDLLGRAGCINEAYDFITTML---IEP 460

Query: 589 NGITYIAVLSAC 600
           N   + A+L AC
Sbjct: 461 NERVWGALLQAC 472



 Score = 94.0 bits (232), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 68/243 (27%), Positives = 112/243 (46%), Gaps = 37/243 (15%)

Query: 51  IYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLE 110
           +Y  N+  V KA+    LM +    PD  T + +L  C     F +GK +H ++ R  + 
Sbjct: 267 VYANNEFHV-KAVELFMLMEKDEVEPDSITLATVLPPCGELSAFSVGKRIHEIIKRKNMC 325

Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
           PN ++ N+L+ +Y+ CG L +A +IF  M + RD++SW+S+IS+Y   G   +A+ +F +
Sbjct: 326 PNLLLENALMDMYASCGCLKDAREIFDLM-SARDVISWTSIISAYGKHGHGREAVDLFEK 384

Query: 171 MLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
           ML  G  P+   F AV+ ACS+   +A G           YFDS                
Sbjct: 385 MLGQGLEPDSIAFVAVLAACSHAGLLADGK---------HYFDS---------------- 419

Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
             + S Y +  K        +T M+    + GC  +A      M++    P+      ++
Sbjct: 420 --MTSRYHIIPKAEH-----YTCMVDLLGRAGCINEAYDFITTMLIE---PNERVWGALL 469

Query: 291 SAC 293
            AC
Sbjct: 470 QAC 472



 Score = 89.7 bits (221), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 112/508 (22%), Positives = 201/508 (39%), Gaps = 117/508 (23%)

Query: 23  PSRQNLPPSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQK-AIFTLDLMTQKGN--HPDLD 79
           P    +  SSSP   ++ TT     N LI  L    + + A+     M  +G    PD  
Sbjct: 67  PLAHTVLESSSPDGRSRTTTV--CFNVLIRALTASSLHRDALVLFASMRPRGPACFPDHY 124

Query: 80  TYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL----------------------- 116
           TY L LKSC  S++  LG  +HS + + +L+ N  +                        
Sbjct: 125 TYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPEDAYRVFDGM 184

Query: 117 --------NSLISLYSKCGDLNEANKIFK--------------------SMGNKR----- 143
                   N++I+ +++ G  + A ++FK                    +MGN +     
Sbjct: 185 PHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAMGNAKPDDIR 244

Query: 144 ------------DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACS 191
                       +++SW++M++ Y N    V A+ +F+ M +    P+    + V+  C 
Sbjct: 245 FVRRVFDNMQFKELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPDSITLATVLPPCG 304

Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGW 251
                ++G  I+  ++K      ++ +  AL+DM+      L+ A ++FD M+ ++ + W
Sbjct: 305 ELSAFSVGKRIHE-IIKRKNMCPNLLLENALMDMYASCGC-LKDAREIFDLMSARDVISW 362

Query: 252 TLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ-LHSWAI 310
           T +I+   + G  R+A+ LF  M+  G  PD      V++ACS   L   GK    S   
Sbjct: 363 TSIISAYGKHGHGREAVDLFEKMLGQGLEPDSIAFVAVLAACSHAGLLADGKHYFDSMTS 422

Query: 311 RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML-DHNVMSWTAIITGYVQSGGRD 369
           R  +         +VD+  +    G ++++      ML + N   W A++          
Sbjct: 423 RYHIIPKAEHYTCMVDLLGRA---GCINEAYDFITTMLIEPNERVWGALL---------- 469

Query: 370 KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
            +A ++ S+M  G VA ++             L S V EQ   + +             L
Sbjct: 470 -QACRIHSNMDIGLVAADN-------------LFSLVPEQTGYYVL-------------L 502

Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSY 457
            +MYAR+GR  D       +  K +  +
Sbjct: 503 SNMYARAGRWADVTSVRSVMVNKGIKKF 530



 Score = 83.6 bits (205), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 80/311 (25%), Positives = 132/311 (42%), Gaps = 21/311 (6%)

Query: 429 LISMYARSGRMEDARKAFES-----LFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
           LI  YA    +  A    ES           V +N ++ A   +     A  L   +   
Sbjct: 56  LIQAYAACSALPLAHTVLESSSPDGRSRTTTVCFNVLIRALTASSLHRDALVLFASMRPR 115

Query: 484 GVG--TSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
           G       YT+   L   S+   +  G QIH+ + K   + N  + ++ ISMYSRC   E
Sbjct: 116 GPACFPDHYTYPLALKSCSASKDLLLGLQIHSAVAKLRLDRNVYVAHSAISMYSRCGRPE 175

Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLA-DGIKPNGITYIAVLSAC 600
            A++VF  M  R+V+SW +MI GFA+ G   RA+E+F + +   G  P+  T   +L A 
Sbjct: 176 DAYRVFDGMPHRDVVSWNAMIAGFARVGLFDRAIEVFKQFVVLQGSMPDAGTMAGILPAM 235

Query: 601 SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM---PLSAD 657
            +A    +  +  R ++D     + +  +  M+ +   +    +A+E    M    +  D
Sbjct: 236 GNAK--PDDIRFVRRVFDNMQF-KELISWNAMLAVYANNEFHVKAVELFMLMEKDEVEPD 292

Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN----LYASAGHWEYVAN 713
            +   T L  C       +GK   E+I     ++   ++LL N    +YAS G  +    
Sbjct: 293 SITLATVLPPCGELSAFSVGKRIHEIIKR---KNMCPNLLLENALMDMYASCGCLKDARE 349

Query: 714 IRKRMKERNLI 724
           I   M  R++I
Sbjct: 350 IFDLMSARDVI 360


>gi|225450911|ref|XP_002280644.1| PREDICTED: pentatricopeptide repeat-containing protein At3g14330
           [Vitis vinifera]
 gi|296088358|emb|CBI36803.3| unnamed protein product [Vitis vinifera]
          Length = 652

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 205/542 (37%), Positives = 336/542 (61%), Gaps = 8/542 (1%)

Query: 324 LVDMYAKCTVDGSVDDSRKVFD---RMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
           L+ +++ C     VD++R+VF+     +D     W A+  GY ++G   KEA+ L+ +M+
Sbjct: 115 LITLFSVCR---RVDEARRVFEDGGEDVDLPESVWVAMGIGYSRNG-YPKEALLLYYEMV 170

Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
                  +F F+  LKAC +L D      V+   +K     D  V N+L+ +Y+  G  +
Sbjct: 171 CQFGQLGNFAFSMALKACSDLGDLQTGRAVHAQVLKATEDPDQVVNNALLRLYSEDGCFD 230

Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGAS 500
           +A + F+ +  +N+VS+N+++    K     +A E    ++  G+G S  T  ++L   +
Sbjct: 231 EALRVFDGMPHRNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCA 290

Query: 501 SIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
            + A+G G++IHA I+KS  + +  + N+L+ MY++C  ++   +VF  M+ +++ SW +
Sbjct: 291 RVTALGSGKEIHAVIVKSTAKPDAPVLNSLVDMYAKCGAMDYCRRVFNGMQGKDLTSWNT 350

Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
           +ITG+A +G    A+E F +M+  G  P+GIT+IA+LS CSHAGL  +G + F  M  ++
Sbjct: 351 LITGYAINGRMTEAMESFQEMICSGFSPDGITFIALLSGCSHAGLADDGCRLFEMMKMDY 410

Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
           GI   +EHYAC+VD+LGR+G + EALE +++MP      +W + L +CR+HG+  L +  
Sbjct: 411 GISPTVEHYACLVDVLGRAGRIKEALEIVKNMPFKPTGSIWGSLLNSCRLHGNVPLAEAV 470

Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
           A+ + E +P +   +++LSN+YA+AG WE V  +R+ M++R + KEAGCSW++  +K+H 
Sbjct: 471 AKRLFELEPNNAGNYVMLSNIYANAGMWESVKVVREFMEKRGMTKEAGCSWLQIKSKIHT 530

Query: 741 FHVGETSHPK-TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAV 799
           F  G ++  + ++E      +L   ++E GY+PDT  VLH++ EE +  ++  HSE++A 
Sbjct: 531 FVAGGSNEFRNSVEYKKVWKRLMEAMEEVGYVPDTGVVLHDVSEEMRAMWVCGHSERLAT 590

Query: 800 AFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCND 859
            F LI+T+   PIR+ KNLRVC DCH+ +K +S VTGR IVLRD+NRFHH KDG CSC D
Sbjct: 591 MFALINTASGMPIRITKNLRVCVDCHSWVKTLSKVTGRVIVLRDTNRFHHFKDGVCSCKD 650

Query: 860 YW 861
           YW
Sbjct: 651 YW 652



 Score =  146 bits (368), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 144/552 (26%), Positives = 252/552 (45%), Gaps = 59/552 (10%)

Query: 20  PSNPSRQNLPPSSSPPFIAQPTT--SEPLSNRLIYHLN-DGRVQKAIFTLDLMTQK--GN 74
           P+     N+  S++    + PTT     L N  +  L+  G++ +A+  ++    K    
Sbjct: 5   PAISLSTNITVSTNITATSAPTTLHKHRLHNSTLKSLSKSGKLDEALRLIEYWPSKSPAT 64

Query: 75  HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS------LISLYSKCGD 128
            PD++  +L L SCI  +    G+ ++  L   +   N  +LN+      LI+L+S C  
Sbjct: 65  APDVEACALFLHSCISRKALEHGQRLYLQLLLYRDRCNHNLLNNPTLKGKLITLFSVCRR 124

Query: 129 LNEANKIFKSMGNKRDIVS--WSSMISSYVNRGKQVDAIHMFVEML-ELGFCPNEYCFSA 185
           ++EA ++F+  G   D+    W +M   Y   G   +A+ ++ EM+ + G   N + FS 
Sbjct: 125 VDEARRVFEDGGEDVDLPESVWVAMGIGYSRNGYPKEALLLYYEMVCQFGQLGN-FAFSM 183

Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTE 245
            ++ACS+  ++  G  ++  +LK    D D  V  AL+ ++ +     + A +VFD M  
Sbjct: 184 ALKACSDLGDLQTGRAVHAQVLKATE-DPDQVVNNALLRLYSEDGC-FDEALRVFDGMPH 241

Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
           +N V W  +I    +     +AI  F  M   G      TL+ ++  C+ +    SGK++
Sbjct: 242 RNVVSWNSLIAGLVKKDGVFEAIEAFRIMQGKGMGFSWVTLTTILPVCARVTALGSGKEI 301

Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
           H+  +++    D  V  SLVDMYAKC   G++D  R+VF+ M   ++ SW  +ITGY  +
Sbjct: 302 HAVIVKSTAKPDAPVLNSLVDMYAKC---GAMDYCRRVFNGMQGKDLTSWNTLITGYAIN 358

Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
            GR  EA++ F +MI    +P+  TF ++L  C             +HA   G A D C 
Sbjct: 359 -GRMTEAMESFQEMICSGFSPDGITFIALLSGC-------------SHA---GLADDGCR 401

Query: 426 GNSLISM-YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
              ++ M Y  S  +E                Y  +VD   +    ++A E++  +    
Sbjct: 402 LFEMMKMDYGISPTVEH---------------YACLVDVLGRAGRIKEALEIVKNMPFKP 446

Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC-IYNALISMYSRCANVEAA 543
            G+    + SLL+     G +   E +  R+ +   E N+   Y  L ++Y+     E+ 
Sbjct: 447 TGS---IWGSLLNSCRLHGNVPLAEAVAKRLFE--LEPNNAGNYVMLSNIYANAGMWESV 501

Query: 544 FQVFKEMEDRNV 555
             V + ME R +
Sbjct: 502 KVVREFMEKRGM 513


>gi|225457427|ref|XP_002282084.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g74630-like [Vitis vinifera]
          Length = 643

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 245/681 (35%), Positives = 373/681 (54%), Gaps = 49/681 (7%)

Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
           S+++  C + +N+   H    ++ K G     +  G  L+   V     L+ A ++F   
Sbjct: 9   SSLLTNCRSLKNLKQVH---AYVCKTGLDTDPIIAGKLLLHSAVSVPDALDYARRLFLHF 65

Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSG 302
              +      +I    +   P++++  F++M      P D F+ + ++ A +      SG
Sbjct: 66  PNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAPLDSFSFAFLLKAAASYRSLESG 125

Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
            QLH  AI  GL   + VG +LV MY++C   G V  ++KVF+ M + NV++W A++T  
Sbjct: 126 IQLHCQAIVHGLDTHLFVGTTLVSMYSEC---GFVAFAKKVFEEMFEPNVVAWNAVVTAC 182

Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
            + G           D+    +  N   F        NL   NV                
Sbjct: 183 FRCG-----------DVKGADMMFNRMPFR-------NLTSWNV---------------- 208

Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
                 +++ Y ++G +E ARK F  +  K+ VS++TM+  +A N    +AF    E++ 
Sbjct: 209 ------MLAGYTKAGELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFRELQQ 262

Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
            G+  +  +    LS  +  GAI  G+ +H  I KSGF     + NAL+  YS+C NV  
Sbjct: 263 VGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKCGNVGM 322

Query: 543 AFQVFKEM-EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
           A  VF+ M E R+++SWTSMI G A HG+   A+++F++M   GI+P+GI +I++L ACS
Sbjct: 323 ARLVFERMPEKRSIVSWTSMIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACS 382

Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
           HAGLI +G+++F  M D + I   +EHY CMVDL GR+G L +A EFI  MP+    ++W
Sbjct: 383 HAGLIEKGYEYFYKMKDIYNIEPAIEHYGCMVDLYGRAGQLDKAYEFIIHMPVLPTAIIW 442

Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
           RT LGAC +HG+ +L +   E + E DP +   H+LLSN+YA AG W+ VA +R+ M ++
Sbjct: 443 RTLLGACSIHGNVKLAERVKERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQ 502

Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG-YLPDTNFVLHE 780
            + K  G S IE D  ++ F  GE  +  T E Y +L ++ LK++  G Y+P+   VLH+
Sbjct: 503 RMNKTPGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKEIMLKLRVEGCYIPEVGSVLHD 562

Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
           +E+E+K   + +HSEK+AVAFG+    K   IR+ KNLRVC DCHT +K IS V G EIV
Sbjct: 563 IEDEEKEDSVSRHSEKLAVAFGIARLCKGSIIRIVKNLRVCRDCHTVMKLISKVYGLEIV 622

Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
           +RD +RFH  K G CSC DYW
Sbjct: 623 VRDRSRFHSFKTGSCSCRDYW 643



 Score =  122 bits (306), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 125/543 (23%), Positives = 230/543 (42%), Gaps = 86/543 (15%)

Query: 36  FIAQPTTSEPLSNRLIYHLNDGRV-QKAIFTLDLMTQKGNHPDLDTYSL--LLKSCIRSR 92
           F+  P     + N LI  L +    Q ++ T   M ++   P LD++S   LLK+    R
Sbjct: 62  FLHFPNPDVFMHNTLIRGLAESDTPQNSLITFVEMRRRLTAP-LDSFSFAFLLKAAASYR 120

Query: 93  NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI 152
           +   G  +H       L+ +  +  +L+S+YS+CG +  A K+F+ M    ++V+W++++
Sbjct: 121 SLESGIQLHCQAIVHGLDTHLFVGTTLVSMYSECGFVAFAKKVFEEMFEP-NVVAWNAVV 179

Query: 153 SSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF 212
           ++    G    A  MF  M                       N+   +++     K G  
Sbjct: 180 TACFRCGDVKGADMMFNRM--------------------PFRNLTSWNVMLAGYTKAG-- 217

Query: 213 DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFL 272
                              +LE A K+F +M  K+ V W+ MI      G   +A   F 
Sbjct: 218 -------------------ELELARKLFLEMPVKDDVSWSTMIVGFAHNGFFYEAFGFFR 258

Query: 273 DMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCT 332
           ++   G  P+  +L+G +SAC++      GK LH +  ++G    V V  +L+D Y+KC 
Sbjct: 259 ELQQVGMRPNEVSLTGALSACADAGAIEFGKILHGFIEKSGFLWMVSVNNALLDTYSKC- 317

Query: 333 VDGSVDDSRKVFDRMLD-HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF 391
             G+V  +R VF+RM +  +++SWT++I G     G  +EA++LF +M +  + P+   F
Sbjct: 318 --GNVGMARLVFERMPEKRSIVSWTSMIAGLAMH-GYGEEAIQLFHEMEESGIRPDGIAF 374

Query: 392 ASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFE 451
            S+L AC +   + + E+ Y +  K                      M+D         E
Sbjct: 375 ISILYACSH---AGLIEKGYEYFYK----------------------MKDIYN-----IE 404

Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
             +  Y  MVD Y +    +KA+E +  +    V  +A  + +LL   S  G +   E++
Sbjct: 405 PAIEHYGCMVDLYGRAGQLDKAYEFIIHMP---VLPTAIIWRTLLGACSIHGNVKLAERV 461

Query: 512 HARI--IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHG 569
             R+  +      +H + + + ++  +  +V A  +   +        W+ +      + 
Sbjct: 462 KERLSELDPNNSGDHVLLSNIYAVAGKWKDVAAVRRSMTDQRMNKTPGWSMIEVDKIMYS 521

Query: 570 FAA 572
           F A
Sbjct: 522 FVA 524



 Score =  107 bits (268), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 118/461 (25%), Positives = 209/461 (45%), Gaps = 49/461 (10%)

Query: 76  PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
           P++  ++ ++ +C R  +     ++ + +    L   +V+L      Y+K G+L  A K+
Sbjct: 170 PNVVAWNAVVTACFRCGDVKGADMMFNRMPFRNLTSWNVMLAG----YTKAGELELARKL 225

Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
           F  M  K D VSWS+MI  + + G   +A   F E+ ++G  PNE   +  + AC++   
Sbjct: 226 FLEMPVKDD-VSWSTMIVGFAHNGFFYEAFGFFRELQQVGMRPNEVSLTGALSACADAGA 284

Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNT-VGWTL 253
           +  G I++GF+ K G+    V V  AL+D + K G+V +  A  VF++M EK + V WT 
Sbjct: 285 IEFGKILHGFIEKSGFLWM-VSVNNALLDTYSKCGNVGM--ARLVFERMPEKRSIVSWTS 341

Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
           MI      G   +AI+LF +M  SG  PD      ++ ACS   L   G + + + ++  
Sbjct: 342 MIAGLAMHGYGEEAIQLFHEMEESGIRPDGIAFISILYACSHAGLIEKGYE-YFYKMKDI 400

Query: 314 LALDVCV---GCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAI-----ITGYVQ 364
             ++  +   GC +VD+Y +    G +D + +    M +    + W  +     I G V+
Sbjct: 401 YNIEPAIEHYGC-MVDLYGRA---GQLDKAYEFIIHMPVLPTAIIWRTLLGACSIHGNVK 456

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
              R KE +        G    +H   +++    G   D     +  T      + ++  
Sbjct: 457 LAERVKERLSELDPNNSG----DHVLLSNIYAVAGKWKDVAAVRRSMT-----DQRMNKT 507

Query: 425 VGNSLIS----MYA-RSGRMEDA--RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
            G S+I     MY+  +G ++++   +A+E L E        M+    +     +   +L
Sbjct: 508 PGWSMIEVDKIMYSFVAGEVQNSITEEAYEKLKE-------IMLKLRVEGCYIPEVGSVL 560

Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
           H+IED     S    +  L+ A  I  + KG  I  RI+K+
Sbjct: 561 HDIEDEEKEDSVSRHSEKLAVAFGIARLCKGSII--RIVKN 599


>gi|125588235|gb|EAZ28899.1| hypothetical protein OsJ_12939 [Oryza sativa Japonica Group]
          Length = 611

 Score =  425 bits (1092), Expect = e-116,   Method: Compositional matrix adjust.
 Identities = 223/568 (39%), Positives = 340/568 (59%), Gaps = 12/568 (2%)

Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS-----VDDSRKVFDRMLDHNVMSW-TA 357
           QLH+ A++ G  L       +  +   CT  G+     +  +R+VFDR+     + W   
Sbjct: 46  QLHAVAVKAGGGLQAHPA-FVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNT 104

Query: 358 IITGYVQSGGRD---KEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
           ++ GY + G      +EA ++F  M++  VAP+ +TF S+LKAC +        Q +  A
Sbjct: 105 LLRGYARGGWGGGCAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVA 164

Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
           VK G A  + V  +LI+MYA  G +  AR  F+ +  + +VSYN M+ A  ++    +A 
Sbjct: 165 VKAGAAEHEYVAPTLINMYAECGDVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEAL 224

Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
            L  E++  G+  ++ T  S+LS  + +GA+  G  IH  I K   +S   +  ALI MY
Sbjct: 225 VLFREMQAKGLKPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMY 284

Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
           ++C ++E A  VF++ME R+  +W+ M+  +A HG+   A+ +F +M   G+KP+ +T++
Sbjct: 285 AKCGSLEDAIGVFQDMESRDKQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFL 344

Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
            VL ACSH+G++SEG ++F SM  E+GIV  ++HY C+ DLL RSG L  A +FI  +P+
Sbjct: 345 GVLYACSHSGMVSEGLQYFDSM-REYGIVSGIKHYGCVTDLLARSGQLERAYKFIDELPI 403

Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
               ++WRT L AC  HGD ++GK   E ILE D      +++ SNL A+ G WE +  +
Sbjct: 404 KPTAILWRTLLSACAGHGDVDMGKRVFERILELDDSHGGDYVIFSNLCANTGRWEEMNMV 463

Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
           RK M E+ ++K  GCS IE DN VH+F  G+ SHP + E    +D++  ++K  GY+P+T
Sbjct: 464 RKLMSEKGVVKVPGCSSIEIDNMVHEFFAGDGSHPHSQEARRMVDEVIEQLKLVGYVPNT 523

Query: 775 NFVLH-ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
           + V H E+ EE+K   L  HSEK+A++FGL++T+    +R+ KNLRVC DCH+  K +SM
Sbjct: 524 SHVFHVEMGEEEKATSLRYHSEKLAISFGLLNTAPGTTLRIVKNLRVCPDCHSMAKLVSM 583

Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
           V  R I+LRD NRFHH +DG CSC DYW
Sbjct: 584 VFNRRIILRDLNRFHHFEDGVCSCGDYW 611



 Score =  142 bits (358), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 116/466 (24%), Positives = 216/466 (46%), Gaps = 68/466 (14%)

Query: 109 LEPNSVILNSLISLYSKCG-----DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV- 162
           L+ +   +  L++L ++ G      L  A ++F  + +  D+V +++++  Y   G    
Sbjct: 58  LQAHPAFVTRLLTLCTEQGAEAPAHLAYARQVFDRIPHPGDVVWYNTLLRGYARGGWGGG 117

Query: 163 ---DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
              +A  +FV M+E G  P+ Y F ++++AC++      G   +G  +K G  + +  V 
Sbjct: 118 CAEEAARVFVRMMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEY-VA 176

Query: 220 CALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
             LI+M+ +   D+ +A  +FD+M  +  V +  MIT   +   P +A+ LF +M   G 
Sbjct: 177 PTLINMYAECG-DVRAARVMFDRMDGECVVSYNAMITASVRSSLPGEALVLFREMQAKGL 235

Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
            P   TL  V+SAC+ L     G+ +H +  +  L   V V  +L+DMYAKC   GS++D
Sbjct: 236 KPTSVTLISVLSACALLGALELGRWIHDYIRKMRLDSLVKVNTALIDMYAKC---GSLED 292

Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
           +  VF  M   +  +W+ ++  Y    G  +EA+ +F +M +  + P+  TF  VL AC 
Sbjct: 293 AIGVFQDMESRDKQAWSVMMVAYANH-GYGREAISMFEEMKKQGMKPDDVTFLGVLYACS 351

Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS--- 456
           +                                   SG + +  + F+S+ E  +VS   
Sbjct: 352 H-----------------------------------SGMVSEGLQYFDSMREYGIVSGIK 376

Query: 457 -YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI 515
            Y  + D  A++   E+A++ + E+    +  +A  + +LLS  +  G +  G+++  RI
Sbjct: 377 HYGCVTDLLARSGQLERAYKFIDELP---IKPTAILWRTLLSACAGHGDVDMGKRVFERI 433

Query: 516 IK--SGFESNHCIYNALISMYSRCANV---EAAFQVFKEMEDRNVI 556
           ++       ++ I++ L      CAN    E    V K M ++ V+
Sbjct: 434 LELDDSHGGDYVIFSNL------CANTGRWEEMNMVRKLMSEKGVV 473



 Score =  125 bits (315), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 103/394 (26%), Positives = 179/394 (45%), Gaps = 56/394 (14%)

Query: 69  MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
           M ++G  PD  T+  LLK+C  +R    G+  H +  ++    +  +  +LI++Y++CGD
Sbjct: 129 MMEEGVAPDTYTFVSLLKACASARAGEEGRQAHGVAVKAGAAEHEYVAPTLINMYAECGD 188

Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
           +  A  +F  M +   +VS+++MI++ V      +A+ +F EM   G  P      +V+ 
Sbjct: 189 VRAARVMFDRM-DGECVVSYNAMITASVRSSLPGEALVLFREMQAKGLKPTSVTLISVLS 247

Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
           AC+    + +G  I+ ++ K    DS V V  ALIDM+ K GS  LE A  VF  M  ++
Sbjct: 248 ACALLGALELGRWIHDYIRKM-RLDSLVKVNTALIDMYAKCGS--LEDAIGVFQDMESRD 304

Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
              W++M+      G  R+AI +F +M   G  PD  T  GV+ ACS           HS
Sbjct: 305 KQAWSVMMVAYANHGYGREAISMFEEMKKQGMKPDDVTFLGVLYACS-----------HS 353

Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT---AIITGYVQ 364
             +  GL                           + FD M ++ ++S       +T  + 
Sbjct: 354 GMVSEGL---------------------------QYFDSMREYGIVSGIKHYGCVTDLLA 386

Query: 365 SGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC 424
             G+ + A K   ++    + P    + ++L AC    D ++ ++V+    +R   LDD 
Sbjct: 387 RSGQLERAYKFIDEL---PIKPTAILWRTLLSACAGHGDVDMGKRVF----ERILELDDS 439

Query: 425 VGNSLI---SMYARSGRMEDARKAFESLFEKNLV 455
            G   +   ++ A +GR E+     + + EK +V
Sbjct: 440 HGGDYVIFSNLCANTGRWEEMNMVRKLMSEKGVV 473


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.322    0.135    0.408 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,145,659,202
Number of Sequences: 23463169
Number of extensions: 544878848
Number of successful extensions: 2088527
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 10380
Number of HSP's successfully gapped in prelim test: 2191
Number of HSP's that attempted gapping in prelim test: 1794463
Number of HSP's gapped (non-prelim): 85415
length of query: 861
length of database: 8,064,228,071
effective HSP length: 152
effective length of query: 709
effective length of database: 8,792,793,679
effective search space: 6234090718411
effective search space used: 6234090718411
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 82 (36.2 bits)