BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002975
(861 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5G1T1|PP272_ARATH Pentatricopeptide repeat-containing protein At3g49170,
chloroplastic OS=Arabidopsis thaliana GN=EMB2261 PE=2
SV=1
Length = 850
Score = 1105 bits (2857), Expect = 0.0, Method: Compositional matrix adjust.
Identities = 538/870 (61%), Positives = 670/870 (77%), Gaps = 31/870 (3%)
Query: 1 MMTLSLPAPAKIPPPSSFKPSNPSRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRV 59
M++ S P+PAK+P S +PS +R N +++RLI HLN G +
Sbjct: 3 MISFSFPSPAKLPIKS--QPSVSNRIN------------------VADRLILRHLNAGDL 42
Query: 60 QKAIFTLDLMTQKGNHP-DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNS 118
+ A+ LDLM + G P D T+S LLKSCIR+R+F LGKLVH+ L +EP+SV+ NS
Sbjct: 43 RGAVSALDLMARDGIRPMDSVTFSSLLKSCIRARDFRLGKLVHARLIEFDIEPDSVLYNS 102
Query: 119 LISLYSKCGDLNEANKIFKSMG--NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
LISLYSK GD +A +F++M KRD+VSWS+M++ Y N G+++DAI +FVE LELG
Sbjct: 103 LISLYSKSGDSAKAEDVFETMRRFGKRDVVSWSAMMACYGNNGRELDAIKVFVEFLELGL 162
Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
PN+YC++AVIRACSN++ V +G + GFL+K G+F+SDVCVGC+LIDMFVKG E+A
Sbjct: 163 VPNDYCYTAVIRACSNSDFVGVGRVTLGFLMKTGHFESDVCVGCSLIDMFVKGENSFENA 222
Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
YKVFDKM+E N V WTLMITRC Q+G PR+AIR FLDM+LSGF D+FTLS V SAC+EL
Sbjct: 223 YKVFDKMSELNVVTWTLMITRCMQMGFPREAIRFFLDMVLSGFESDKFTLSSVFSACAEL 282
Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
E + GKQLHSWAIR+GL D V CSLVDMYAKC+ DGSVDD RKVFDRM DH+VMSWT
Sbjct: 283 ENLSLGKQLHSWAIRSGLVDD--VECSLVDMYAKCSADGSVDDCRKVFDRMEDHSVMSWT 340
Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
A+ITGY+++ EA+ LFS+MI QG V PNHFTF+S KACGNL D V +QV A
Sbjct: 341 ALITGYMKNCNLATEAINLFSEMITQGHVEPNHFTFSSAFKACGNLSDPRVGKQVLGQAF 400
Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
KRG A + V NS+ISM+ +S RMEDA++AFESL EKNLVSYNT +D +NLN E+AF+
Sbjct: 401 KRGLASNSSVANSVISMFVKSDRMEDAQRAFESLSEKNLVSYNTFLDGTCRNLNFEQAFK 460
Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
LL EI + +G SA+TFASLLSG +++G+I KGEQIH++++K G N + NALISMYS
Sbjct: 461 LLSEITERELGVSAFTFASLLSGVANVGSIRKGEQIHSQVVKLGLSCNQPVCNALISMYS 520
Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA 595
+C +++ A +VF ME+RNVISWTSMITGFAKHGFA R LE F +M+ +G+KPN +TY+A
Sbjct: 521 KCGSIDTASRVFNFMENRNVISWTSMITGFAKHGFAIRVLETFNQMIEEGVKPNEVTYVA 580
Query: 596 VLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
+LSACSH GL+SEGW+HF SMY++H I +MEHYACMVDLL R+G LT+A EFI +MP
Sbjct: 581 ILSACSHVGLVSEGWRHFNSMYEDHKIKPKMEHYACMVDLLCRAGLLTDAFEFINTMPFQ 640
Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
ADVLVWRTFLGACRVH +TELGK AA ILE DP +PAA+I LSN+YA AG WE +R
Sbjct: 641 ADVLVWRTFLGACRVHSNTELGKLAARKILELDPNEPAAYIQLSNIYACAGKWEESTEMR 700
Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
++MKERNL+KE GCSWIE +K+HKF+VG+T+HP +IY ELD+L +IK GY+PDT+
Sbjct: 701 RKMKERNLVKEGGCSWIEVGDKIHKFYVGDTAHPNAHQIYDELDRLITEIKRCGYVPDTD 760
Query: 776 FVLHEL----EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
VLH+L +E +K + L+QHSEKIAVAFGLISTSKS+P+RVFKNLRVCGDCH A+KYI
Sbjct: 761 LVLHKLEEENDEAEKERLLYQHSEKIAVAFGLISTSKSRPVRVFKNLRVCGDCHNAMKYI 820
Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
S V+GREIVLRD NRFHH KDGKCSCNDYW
Sbjct: 821 STVSGREIVLRDLNRFHHFKDGKCSCNDYW 850
>sp|Q9ZUW3|PP172_ARATH Pentatricopeptide repeat-containing protein At2g27610
OS=Arabidopsis thaliana GN=PCMP-H60 PE=2 SV=1
Length = 868
Score = 559 bits (1441), Expect = e-158, Method: Compositional matrix adjust.
Identities = 297/809 (36%), Positives = 483/809 (59%), Gaps = 14/809 (1%)
Query: 56 DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
DGR Q+A + + G D +S +LK + G+ +H + + +
Sbjct: 71 DGRTQEAKRLFLNIHRLGMEMDCSIFSSVLKVSATLCDELFGRQLHCQCIKFGFLDDVSV 130
Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
SL+ Y K + + K+F M +R++V+W+++IS Y + + +F+ M G
Sbjct: 131 GTSLVDTYMKGSNFKDGRKVFDEM-KERNVVTWTTLISGYARNSMNDEVLTLFMRMQNEG 189
Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
PN + F+A + + G ++ ++K G D + V +LI++++K ++
Sbjct: 190 TQPNSFTFAAALGVLAEEGVGGRGLQVHTVVVKNG-LDKTIPVSNSLINLYLKCG-NVRK 247
Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
A +FDK K+ V W MI+ G +A+ +F M L+ + + V+ C+
Sbjct: 248 ARILFDKTEVKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCAN 307
Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMS 354
L+ +QLH ++ G D + +L+ Y+KCT ++ D+ ++F + NV+S
Sbjct: 308 LKELRFTEQLHCSVVKYGFLFDQNIRTALMVAYSKCT---AMLDALRLFKEIGCVGNVVS 364
Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
WTA+I+G++Q+ G++ EAV LFS+M + V PN FT++ +L A + S V QV
Sbjct: 365 WTAMISGFLQNDGKE-EAVDLFSEMKRKGVRPNEFTYSVILTALPVISPSEVHAQV---- 419
Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
VK VG +L+ Y + G++E+A K F + +K++V+++ M+ YA+ +E A
Sbjct: 420 VKTNYERSSTVGTALLDAYVKLGKVEEAAKVFSGIDDKDIVAWSAMLAGYAQTGETEAAI 479
Query: 475 ELLHEIEDTGVGTSAYTFASLLS-GASSIGAIGKGEQIHARIIKSGFESNHCIYNALISM 533
++ E+ G+ + +TF+S+L+ A++ ++G+G+Q H IKS +S+ C+ +AL++M
Sbjct: 480 KMFGELTKGGIKPNEFTFSSILNVCAATNASMGQGKQFHGFAIKSRLDSSLCVSSALLTM 539
Query: 534 YSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
Y++ N+E+A +VFK +++++SW SMI+G+A+HG A +AL++F +M +K +G+T+
Sbjct: 540 YAKKGNIESAEEVFKRQREKDLVSWNSMISGYAQHGQAMKALDVFKEMKKRKVKMDGVTF 599
Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP 653
I V +AC+HAGL+ EG K+F M + I EH +CMVDL R+G L +A++ I +MP
Sbjct: 600 IGVFAACTHAGLVEEGEKYFDIMVRDCKIAPTKEHNSCMVDLYSRAGQLEKAMKVIENMP 659
Query: 654 LSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVAN 713
A +WRT L ACRVH TELG+ AAE I+ P+D AA++LLSN+YA +G W+ A
Sbjct: 660 NPAGSTIWRTILAACRVHKKTELGRLAAEKIIAMKPEDSAAYVLLSNMYAESGDWQERAK 719
Query: 714 IRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPD 773
+RK M ERN+ KE G SWIE NK + F G+ SHP +IY +L+ L+ ++K+ GY PD
Sbjct: 720 VRKLMNERNVKKEPGYSWIEVKNKTYSFLAGDRSHPLKDQIYMKLEDLSTRLKDLGYEPD 779
Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
T++VL ++++E K L QHSE++A+AFGLI+T K P+ + KNLRVCGDCH IK I+
Sbjct: 780 TSYVLQDIDDEHKEAVLAQHSERLAIAFGLIATPKGSPLLIIKNLRVCGDCHLVIKLIAK 839
Query: 834 VTGREIVLRDSNRFHHI-KDGKCSCNDYW 861
+ REIV+RDSNRFHH DG CSC D+W
Sbjct: 840 IEEREIVVRDSNRFHHFSSDGVCSCGDFW 868
Score = 197 bits (502), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 147/469 (31%), Positives = 240/469 (51%), Gaps = 30/469 (6%)
Query: 219 GCALIDMFVKGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
G A + ++ G+V L +A+ +FDK ++ + ++ ++ G ++A RLFL++
Sbjct: 26 GVAQVRIYCFGTVSSSRLYNAHNLFDKSPGRDRESYISLLFGFSRDGRTQEAKRLFLNIH 85
Query: 276 LSGFLPDRFTLSGVVSACSEL--ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
G D S V+ + L ELF G+QLH I+ G DV VG SLVD Y K +
Sbjct: 86 RLGMEMDCSIFSSVLKVSATLCDELF--GRQLHCQCIKFGFLDDVSVGTSLVDTYMKGS- 142
Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
+ D RKVFD M + NV++WT +I+GY ++ D E + LF M PN FTFA+
Sbjct: 143 --NFKDGRKVFDEMKERNVVTWTTLISGYARNSMND-EVLTLFMRMQNEGTQPNSFTFAA 199
Query: 394 VLKACGNLLDSNVAE---QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
L G L + V QV+T VK G V NSLI++Y + G + AR F+
Sbjct: 200 AL---GVLAEEGVGGRGLQVHTVVVKNGLDKTIPVSNSLINLYLKCGNVRKARILFDKTE 256
Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
K++V++N+M+ YA N +A + + + V S +FAS++ +++ + EQ
Sbjct: 257 VKSVVTWNSMISGYAANGLDLEALGMFYSMRLNYVRLSESSFASVIKLCANLKELRFTEQ 316
Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
+H ++K GF + I AL+ YS+C + A ++FKE+ NV+SWT+MI+GF ++
Sbjct: 317 LHCSVVKYGFLFDQNIRTALMVAYSKCTAMLDALRLFKEIGCVGNVVSWTAMISGFLQND 376
Query: 570 FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH---FRSMYDEHGIVQRM 626
A+++F +M G++PN TY +L+A +IS H ++ Y+ V
Sbjct: 377 GKEEAVDLFSEMKRKGVRPNEFTYSVILTALP---VISPSEVHAQVVKTNYERSSTVG-- 431
Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
++D + G + EA + + D++ W L G+TE
Sbjct: 432 ---TALLDAYVKLGKVEEAAKVFSGID-DKDIVAWSAMLAGYAQTGETE 476
>sp|Q7Y211|PP285_ARATH Pentatricopeptide repeat-containing protein At3g57430,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H81 PE=2
SV=2
Length = 890
Score = 551 bits (1419), Expect = e-155, Method: Compositional matrix adjust.
Identities = 309/891 (34%), Positives = 514/891 (57%), Gaps = 40/891 (4%)
Query: 3 TLSLPA----PAKIPPPSSFK--------PSNPSRQNLPPSSSPP--FIAQPTTSEPLSN 48
T SLP+ P+++ P S K P++ + S P FI+Q + E +
Sbjct: 8 TFSLPSIFPFPSQLLPFSRHKHPYLLRATPTSATEDVASAVSGAPSIFISQSRSPEWWID 67
Query: 49 RLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
L + +++A+ T M G PD + LLK+ ++ LGK +H+ + +
Sbjct: 68 LLRSKVRSNLLREAVLTYVDMIVLGIKPDNYAFPALLKAVADLQDMELGKQIHAHVYKFG 127
Query: 109 LEPNSV-ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
+SV + N+L++LY KCGD K+F + ++R+ VSW+S+ISS + K A+
Sbjct: 128 YGVDSVTVANTLVNLYRKCGDFGAVYKVFDRI-SERNQVSWNSLISSLCSFEKWEMALEA 186
Query: 168 FVEMLELGFCPNEYCFSAVIRACSN---TENVAIGHIIYGFLLKCGYFDSDVCVGCALID 224
F ML+ P+ + +V+ ACSN E + +G ++ + L+ G +S + L+
Sbjct: 187 FRCMLDENVEPSSFTLVSVVTACSNLPMPEGLMMGKQVHAYGLRKGELNSFII--NTLVA 244
Query: 225 MFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRF 284
M+ K L S+ + ++ V W +++ Q +A+ +M+L G PD F
Sbjct: 245 MYGKLG-KLASSKVLLGSFGGRDLVTWNTVLSSLCQNEQLLEALEYLREMVLEGVEPDEF 303
Query: 285 TLSGVVSACSELELFTSGKQLHSWAIRTG-LALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
T+S V+ ACS LE+ +GK+LH++A++ G L + VG +LVDMY C V R+V
Sbjct: 304 TISSVLPACSHLEMLRTGKELHAYALKNGSLDENSFVGSALVDMYCNCK---QVLSGRRV 360
Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ-VAPNHFTFASVLKACGNLL 402
FD M D + W A+I GY Q+ DKEA+ LF M + + N T A V+ AC
Sbjct: 361 FDGMFDRKIGLWNAMIAGYSQNE-HDKEALLLFIGMEESAGLLANSTTMAGVVPACVRSG 419
Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
+ E ++ VKRG D V N+L+ MY+R G+++ A + F + +++LV++NTM+
Sbjct: 420 AFSRKEAIHGFVVKRGLDRDRFVQNTLMDMYSRLGKIDIAMRIFGKMEDRDLVTWNTMIT 479
Query: 463 AYAKNLNSEKAFELLHEIED-----------TGVGTSAYTFASLLSGASSIGAIGKGEQI 511
Y + + E A LLH++++ + ++ T ++L +++ A+ KG++I
Sbjct: 480 GYVFSEHHEDALLLLHKMQNLERKVSKGASRVSLKPNSITLMTILPSCAALSALAKGKEI 539
Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
HA IK+ ++ + +AL+ MY++C ++ + +VF ++ +NVI+W +I + HG
Sbjct: 540 HAYAIKNNLATDVAVGSALVDMYAKCGCLQMSRKVFDQIPQKNVITWNVIIMAYGMHGNG 599
Query: 572 ARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYAC 631
A+++ M+ G+KPN +T+I+V +ACSH+G++ EG + F M ++G+ +HYAC
Sbjct: 600 QEAIDLLRMMMVQGVKPNEVTFISVFAACSHSGMVDEGLRIFYVMKPDYGVEPSSDHYAC 659
Query: 632 MVDLLGRSGSLTEALEFIRSMPLSAD-VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
+VDLLGR+G + EA + + MP + W + LGA R+H + E+G+ AA+ +++ +P
Sbjct: 660 VVDLLGRAGRIKEAYQLMNMMPRDFNKAGAWSSLLGASRIHNNLEIGEIAAQNLIQLEPN 719
Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
+ ++LL+N+Y+SAG W+ +R+ MKE+ + KE GCSWIE ++VHKF G++SHP+
Sbjct: 720 VASHYVLLANIYSSAGLWDKATEVRRNMKEQGVRKEPGCSWIEHGDEVHKFVAGDSSHPQ 779
Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
+ ++ L+ L ++++ GY+PDT+ VLH +EE++K L HSEK+A+AFG+++TS
Sbjct: 780 SEKLSGYLETLWERMRKEGYVPDTSCVLHNVEEDEKEILLCGHSEKLAIAFGILNTSPGT 839
Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
IRV KNLRVC DCH A K+IS + REI+LRD RFH K+G CSC DYW
Sbjct: 840 IIRVAKNLRVCNDCHLATKFISKIVDREIILRDVRRFHRFKNGTCSCGDYW 890
>sp|Q9SVP7|PP307_ARATH Pentatricopeptide repeat-containing protein At4g13650 OS=Arabidopsis
thaliana GN=PCMP-H42 PE=2 SV=2
Length = 1064
Score = 548 bits (1413), Expect = e-155, Method: Compositional matrix adjust.
Identities = 279/789 (35%), Positives = 461/789 (58%), Gaps = 7/789 (0%)
Query: 73 GNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEA 132
G P +S +L +C + + +G+ +H L+ + ++ + N+L+SLY G+L A
Sbjct: 283 GIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLGFSSDTYVCNALVSLYFHLGNLISA 342
Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSN 192
IF +M ++RD V+++++I+ G A+ +F M G P+ ++++ ACS
Sbjct: 343 EHIFSNM-SQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNTLASLVVACSA 401
Query: 193 TENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWT 252
+ G ++ + K G+ ++ G AL++++ K D+E+A F + +N V W
Sbjct: 402 DGTLFRGQQLHAYTTKLGFASNNKIEG-ALLNLYAK-CADIETALDYFLETEVENVVLWN 459
Query: 253 LMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRT 312
+M+ L R++ R+F M + +P+++T ++ C L G+Q+HS I+T
Sbjct: 460 VMLVAYGLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKT 519
Query: 313 GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEA 372
L+ V L+DMYAK G +D + + R +V+SWT +I GY Q DK A
Sbjct: 520 NFQLNAYVCSVLIDMYAKL---GKLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDK-A 575
Query: 373 VKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISM 432
+ F M+ + + + + AC L +Q++ A G + D N+L+++
Sbjct: 576 LTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGFSSDLPFQNALVTL 635
Query: 433 YARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTF 492
Y+R G++E++ AFE + +++N +V + ++ N+E+A + + G+ + +TF
Sbjct: 636 YSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVRMNREGIDNNNFTF 695
Query: 493 ASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED 552
S + AS + +G+Q+HA I K+G++S + NALISMY++C ++ A + F E+
Sbjct: 696 GSAVKAASETANMKQGKQVHAVITKTGYDSETEVCNALISMYAKCGSISDAEKQFLEVST 755
Query: 553 RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKH 612
+N +SW ++I ++KHGF + AL+ F +M+ ++PN +T + VLSACSH GL+ +G +
Sbjct: 756 KNEVSWNAIINAYSKHGFGSEALDSFDQMIHSNVRPNHVTLVGVLSACSHIGLVDKGIAY 815
Query: 613 FRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
F SM E+G+ + EHY C+VD+L R+G L+ A EFI+ MP+ D LVWRT L AC VH
Sbjct: 816 FESMNSEYGLSPKPEHYVCVVDMLTRAGLLSRAKEFIQEMPIKPDALVWRTLLSACVVHK 875
Query: 673 DTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
+ E+G+ AA +LE +P+D A ++LLSNLYA + W+ R++MKE+ + KE G SWI
Sbjct: 876 NMEIGEFAAHHLLELEPEDSATYVLLSNLYAVSKKWDARDLTRQKMKEKGVKKEPGQSWI 935
Query: 733 EADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQ 792
E N +H F+VG+ +HP EI+ L + E GY+ D +L+EL+ EQK +F
Sbjct: 936 EVKNSIHSFYVGDQNHPLADEIHEYFQDLTKRASEIGYVQDCFSLLNELQHEQKDPIIFI 995
Query: 793 HSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKD 852
HSEK+A++FGL+S + PI V KNLRVC DCH IK++S V+ REI++RD+ RFHH +
Sbjct: 996 HSEKLAISFGLLSLPATVPINVMKNLRVCNDCHAWIKFVSKVSNREIIVRDAYRFHHFEG 1055
Query: 853 GKCSCNDYW 861
G CSC DYW
Sbjct: 1056 GACSCKDYW 1064
Score = 284 bits (727), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 181/632 (28%), Positives = 324/632 (51%), Gaps = 21/632 (3%)
Query: 48 NRLIYHLNDGRVQKAIFTLDL-MTQKGNHPDLDTYSLLLKSCIR-SRNFHLGKLVHSLLT 105
N++I L + +F L + M + P+ T+S +L++C S F + + +H+ +
Sbjct: 155 NKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFSGVLEACRGGSVAFDVVEQIHARIL 214
Query: 106 RSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
L ++V+ N LI LYS+ G ++ A ++F + +D SW +MIS + +AI
Sbjct: 215 YQGLRDSTVVCNPLIDLYSRNGFVDLARRVFDGL-RLKDHSSWVAMISGLSKNECEAEAI 273
Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
+F +M LG P Y FS+V+ AC E++ IG ++G +LK G F SD V AL+ +
Sbjct: 274 RLFCDMYVLGIMPTPYAFSSVLSACKKIESLEIGEQLHGLVLKLG-FSSDTYVCNALVSL 332
Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
+ +L SA +F M++++ V + +I +Q G A+ LF M L G PD T
Sbjct: 333 YFHLG-NLISAEHIFSNMSQRDAVTYNTLINGLSQCGYGEKAMELFKRMHLDGLEPDSNT 391
Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
L+ +V ACS G+QLH++ + G A + + +L+++YAKC D D
Sbjct: 392 LASLVVACSADGTLFRGQQLHAYTTKLGFASNNKIEGALLNLYAKCA------DIETALD 445
Query: 346 RMLD---HNVMSWTAIITGYVQSGGRD--KEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
L+ NV+ W ++ Y G D + + ++F M ++ PN +T+ S+LK C
Sbjct: 446 YFLETEVENVVLWNVMLVAY---GLLDDLRNSFRIFRQMQIEEIVPNQYTYPSILKTCIR 502
Query: 401 LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTM 460
L D + EQ+++ +K L+ V + LI MYA+ G+++ A K++VS+ TM
Sbjct: 503 LGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLGKLDTAWDILIRFAGKDVVSWTTM 562
Query: 461 VDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGF 520
+ Y + +KA ++ D G+ + + +S + + A+ +G+QIHA+ SGF
Sbjct: 563 IAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVSACAGLQALKEGQQIHAQACVSGF 622
Query: 521 ESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYK 580
S+ NAL+++YSRC +E ++ F++ E + I+W ++++GF + G AL +F +
Sbjct: 623 SSDLPFQNALVTLYSRCGKIEESYLAFEQTEAGDNIAWNALVSGFQQSGNNEEALRVFVR 682
Query: 581 MLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
M +GI N T+ + + A S + +G K ++ + G E ++ + + G
Sbjct: 683 MNREGIDNNNFTFGSAVKAASETANMKQG-KQVHAVITKTGYDSETEVCNALISMYAKCG 741
Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
S+++A + + +V W + A HG
Sbjct: 742 SISDAEKQFLEVSTKNEV-SWNAIINAYSKHG 772
Score = 256 bits (654), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 177/618 (28%), Positives = 312/618 (50%), Gaps = 23/618 (3%)
Query: 66 LDLMTQKGNHPDLDTYSLLLKSCIRSR-NFHLGKLVHSLLTRSKLEPNSVILNSLISLYS 124
+D + +G P+ T LL+ C+++ + G+ +HS + + L+ N + L Y
Sbjct: 72 IDSVENRGIRPNHQTLKWLLEGCLKTNGSLDEGRKLHSQILKLGLDSNGCLSEKLFDFYL 131
Query: 125 KCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFS 184
GDL A K+F M +R I +W+ MI +R + +FV M+ PNE FS
Sbjct: 132 FKGDLYGAFKVFDEMP-ERTIFTWNKMIKELASRNLIGEVFGLFVRMVSENVTPNEGTFS 190
Query: 185 AVIRACSNTENVAIGHI--IYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFD 241
V+ AC +VA + I+ +L G DS V V LID++ + G VDL A +VFD
Sbjct: 191 GVLEACRGG-SVAFDVVEQIHARILYQGLRDSTV-VCNPLIDLYSRNGFVDL--ARRVFD 246
Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
+ K+ W MI+ ++ C +AIRLF DM + G +P + S V+SAC ++E
Sbjct: 247 GLRLKDHSSWVAMISGLSKNECEAEAIRLFCDMYVLGIMPTPYAFSSVLSACKKIESLEI 306
Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
G+QLH ++ G + D V +LV +Y G++ + +F M + +++ +I G
Sbjct: 307 GEQLHGLVLKLGFSSDTYVCNALVSLYFHL---GNLISAEHIFSNMSQRDAVTYNTLING 363
Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVAEQVYTHAVKRG 418
Q G +K A++LF M + P+ T AS++ AC G L +Q++ + K G
Sbjct: 364 LSQCGYGEK-AMELFKRMHLDGLEPDSNTLASLVVACSADGTLFR---GQQLHAYTTKLG 419
Query: 419 RALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
A ++ + +L+++YA+ +E A F +N+V +N M+ AY + +F +
Sbjct: 420 FASNNKIEGALLNLYAKCADIETALDYFLETEVENVVLWNVMLVAYGLLDDLRNSFRIFR 479
Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
+++ + + YT+ S+L +G + GEQIH++IIK+ F+ N + + LI MY++
Sbjct: 480 QMQIEEIVPNQYTYPSILKTCIRLGDLELGEQIHSQIIKTNFQLNAYVCSVLIDMYAKLG 539
Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
++ A+ + ++V+SWT+MI G+ ++ F +AL F +ML GI+ + + +S
Sbjct: 540 KLDTAWDILIRFAGKDVVSWTTMIAGYTQYNFDDKALTTFRQMLDRGIRSDEVGLTNAVS 599
Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEFIRSMPLSAD 657
AC+ + EG + + G + +V L R G + E+ L F ++ + D
Sbjct: 600 ACAGLQALKEG-QQIHAQACVSGFSSDLPFQNALVTLYSRCGKIEESYLAFEQTE--AGD 656
Query: 658 VLVWRTFLGACRVHGDTE 675
+ W + + G+ E
Sbjct: 657 NIAWNALVSGFQQSGNNE 674
>sp|Q3E6Q1|PPR32_ARATH Pentatricopeptide repeat-containing protein At1g11290
OS=Arabidopsis thaliana GN=PCMP-H40 PE=2 SV=1
Length = 809
Score = 543 bits (1398), Expect = e-153, Method: Compositional matrix adjust.
Identities = 288/780 (36%), Positives = 445/780 (57%), Gaps = 11/780 (1%)
Query: 82 SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGN 141
+LLL+ C + + + L+ ++ L L+SL+ + G ++EA ++F+ + +
Sbjct: 41 ALLLERCSSLKEL---RQILPLVFKNGLYQEHFFQTKLVSLFCRYGSVDEAARVFEPIDS 97
Query: 142 KRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHI 201
K +++ + +M+ + A+ FV M P Y F+ +++ C + + +G
Sbjct: 98 KLNVL-YHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELRVGKE 156
Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
I+G L+K G F D+ L +M+ K + A KVFD+M E++ V W ++ +Q
Sbjct: 157 IHGLLVKSG-FSLDLFAMTGLENMYAKCR-QVNEARKVFDRMPERDLVSWNTIVAGYSQN 214
Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVG 321
G R A+ + M P T+ V+ A S L L + GK++H +A+R+G V +
Sbjct: 215 GMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSGFDSLVNIS 274
Query: 322 CSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQ 381
+LVDMYAKC GS++ +R++FD ML+ NV+SW ++I YVQ+ KEA+ +F M+
Sbjct: 275 TALVDMYAKC---GSLETARQLFDGMLERNVVSWNSMIDAYVQNEN-PKEAMLIFQKMLD 330
Query: 382 GQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMED 441
V P + L AC +L D ++ +V+ G + V NSLISMY + ++
Sbjct: 331 EGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCKEVDT 390
Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
A F L + LVS+N M+ +A+N A ++ V +T+ S+++ +
Sbjct: 391 AASMFGKLQSRTLVSWNAMILGFAQNGRPIDALNYFSQMRSRTVKPDTFTYVSVITAIAE 450
Query: 502 IGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSM 561
+ + IH +++S + N + AL+ MY++C + A +F M +R+V +W +M
Sbjct: 451 LSITHHAKWIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSERHVTTWNAM 510
Query: 562 ITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHG 621
I G+ HGF ALE+F +M IKPNG+T+++V+SACSH+GL+ G K F M + +
Sbjct: 511 IDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCFYMMKENYS 570
Query: 622 IVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAA 681
I M+HY MVDLLGR+G L EA +FI MP+ V V+ LGAC++H + + AA
Sbjct: 571 IELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKNVNFAEKAA 630
Query: 682 EMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKF 741
E + E +P D H+LL+N+Y +A WE V +R M + L K GCS +E N+VH F
Sbjct: 631 ERLFELNPDDGGYHVLLANIYRAASMWEKVGQVRVSMLRQGLRKTPGCSMVEIKNEVHSF 690
Query: 742 HVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAF 801
G T+HP + +IYA L++L IKE GY+PDTN VL +E + K Q L HSEK+A++F
Sbjct: 691 FSGSTAHPDSKKIYAFLEKLICHIKEAGYVPDTNLVL-GVENDVKEQLLSTHSEKLAISF 749
Query: 802 GLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
GL++T+ I V KNLRVC DCH A KYIS+VTGREIV+RD RFHH K+G CSC DYW
Sbjct: 750 GLLNTTAGTTIHVRKNLRVCADCHNATKYISLVTGREIVVRDMQRFHHFKNGACSCGDYW 809
Score = 230 bits (586), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 160/557 (28%), Positives = 280/557 (50%), Gaps = 26/557 (4%)
Query: 44 EPLSNRL--IYHL------NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFH 95
EP+ ++L +YH + KA+ M P + ++ LLK C
Sbjct: 93 EPIDSKLNVLYHTMLKGFAKVSDLDKALQFFVRMRYDDVEPVVYNFTYLLKVCGDEAELR 152
Query: 96 LGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSY 155
+GK +H LL +S + + L ++Y+KC +NEA K+F M +RD+VSW+++++ Y
Sbjct: 153 VGKEIHGLLVKSGFSLDLFAMTGLENMYAKCRQVNEARKVFDRMP-ERDLVSWNTIVAGY 211
Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
G A+ M M E P+ +V+ A S +++G I+G+ ++ G FDS
Sbjct: 212 SQNGMARMALEMVKSMCEENLKPSFITIVSVLPAVSALRLISVGKEIHGYAMRSG-FDSL 270
Query: 216 VCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
V + AL+DM+ K GS LE+A ++FD M E+N V W MI Q P++A+ +F M
Sbjct: 271 VNISTALVDMYAKCGS--LETARQLFDGMLERNVVSWNSMIDAYVQNENPKEAMLIFQKM 328
Query: 275 ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
+ G P ++ G + AC++L G+ +H ++ GL +V V SL+ MY KC
Sbjct: 329 LDEGVKPTDVSVMGALHACADLGDLERGRFIHKLSVELGLDRNVSVVNSLISMYCKCK-- 386
Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
VD + +F ++ ++SW A+I G+ Q+ GR +A+ FS M V P+ FT+ SV
Sbjct: 387 -EVDTAASMFGKLQSRTLVSWNAMILGFAQN-GRPIDALNYFSQMRSRTVKPDTFTYVSV 444
Query: 395 LKACGNLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARKAFESLFEK 452
+ A L ++ A+ + H V LD V +L+ MYA+ G + AR F+ + E+
Sbjct: 445 ITAIAELSITHHAK--WIHGVVMRSCLDKNVFVTTALVDMYAKCGAIMIARLIFDMMSER 502
Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
++ ++N M+D Y + + A EL E++ + + TF S++S S G + G +
Sbjct: 503 HVTTWNAMIDGYGTHGFGKAALELFEEMQKGTIKPNGVTFLSVISACSHSGLVEAGLKCF 562
Query: 513 ARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKH-- 568
+ ++ E + Y A++ + R + A+ +M + ++ + +M+ H
Sbjct: 563 YMMKENYSIELSMDHYGAMVDLLGRAGRLNEAWDFIMQMPVKPAVNVYGAMLGACQIHKN 622
Query: 569 -GFAARALEIFYKMLAD 584
FA +A E +++ D
Sbjct: 623 VNFAEKAAERLFELNPD 639
>sp|Q9M1V3|PP296_ARATH Pentatricopeptide repeat-containing protein At3g63370
OS=Arabidopsis thaliana GN=PCMP-H83 PE=2 SV=2
Length = 960
Score = 536 bits (1380), Expect = e-151, Method: Compositional matrix adjust.
Identities = 284/810 (35%), Positives = 468/810 (57%), Gaps = 7/810 (0%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
++++G A+ M +G L ++ LLK+C + R+ G +HSLL +
Sbjct: 157 YVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIRSGSELHSLLVKLGYHST 216
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
I+N+L+S+Y+K DL+ A ++F K D V W+S++SSY GK ++ + +F EM
Sbjct: 217 GFIVNALVSMYAKNDDLSAARRLFDGFQEKGDAVLWNSILSSYSTSGKSLETLELFREMH 276
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
G PN Y + + AC +G I+ +LK S++ V ALI M+ +
Sbjct: 277 MTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSSTHSSELYVCNALIAMYTRCG-K 335
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
+ A ++ +M + V W +I Q ++A+ F DMI +G D +++ +++A
Sbjct: 336 MPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFSDMIAAGHKSDEVSMTSIIAA 395
Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
L +G +LH++ I+ G ++ VG +L+DMY+KC + + + F RM D ++
Sbjct: 396 SGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCNLTCYMG---RAFLRMHDKDL 452
Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
+SWT +I GY Q+ EA++LF D+ + ++ + S+L+A L + ++++
Sbjct: 453 ISWTTVIAGYAQNDCH-VEALELFRDVAKKRMEIDEMILGSILRASSVLKSMLIVKEIHC 511
Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
H +++G LD + N L+ +Y + M A + FES+ K++VS+ +M+ + A N N +
Sbjct: 512 HILRKG-LLDTVIQNELVDVYGKCRNMGYATRVFESIKGKDVVSWTSMISSSALNGNESE 570
Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
A EL + +TG+ + +LS A+S+ A+ KG +IH +++ GF I A++
Sbjct: 571 AVELFRRMVETGLSADSVALLCILSAAASLSALNKGREIHCYLLRKGFCLEGSIAVAVVD 630
Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
MY+ C ++++A VF +E + ++ +TSMI + HG A+E+F KM + + P+ I+
Sbjct: 631 MYACCGDLQSAKAVFDRIERKGLLQYTSMINAYGMHGCGKAAVELFDKMRHENVSPDHIS 690
Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
++A+L ACSHAGL+ EG + M E+ + EHY C+VD+LGR+ + EA EF++ M
Sbjct: 691 FLALLYACSHAGLLDEGRGFLKIMEHEYELEPWPEHYVCLVDMLGRANCVVEAFEFVKMM 750
Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
VW L ACR H + E+G+ AA+ +LE +P++P +L+SN++A G W V
Sbjct: 751 KTEPTAEVWCALLAACRSHSEKEIGEIAAQRLLELEPKNPGNLVLVSNVFAEQGRWNDVE 810
Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI-KEFGYL 771
+R +MK + K GCSWIE D KVHKF + SHP++ EIY +L ++ K+ +E GY+
Sbjct: 811 KVRAKMKASGMEKHPGCSWIEMDGKVHKFTARDKSHPESKEIYEKLSEVTRKLEREVGYV 870
Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYI 831
DT FVLH ++E +KVQ L HSE+IA+A+GL+ T +R+ KNLRVC DCHT K +
Sbjct: 871 ADTKFVLHNVDEGEKVQMLHGHSERIAIAYGLLRTPDRACLRITKNLRVCRDCHTFCKLV 930
Query: 832 SMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
S + R+IV+RD+NRFHH + G CSC D W
Sbjct: 931 SKLFRRDIVMRDANRFHHFESGLCSCGDSW 960
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 134/517 (25%), Positives = 252/517 (48%), Gaps = 24/517 (4%)
Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKC-GYFDSDVCVGCALIDMFVK-GSVDLESAYKVF 240
F+ V+ C V+ G ++ + K F+ D G L+ M+ K GS+D A KVF
Sbjct: 83 FAYVLELCGKRRAVSQGRQLHSRIFKTFPSFELDFLAG-KLVFMYGKCGSLD--DAEKVF 139
Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFT 300
D+M ++ W MI G P A+ L+ +M + G + ++ AC++L
Sbjct: 140 DEMPDRTAFAWNTMIGAYVSNGEPASALALYWNMRVEGVPLGLSSFPALLKACAKLRDIR 199
Query: 301 SGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWTAII 359
SG +LHS ++ G + +LV MYAK + + +R++FD + + + W +I+
Sbjct: 200 SGSELHSLLVKLGYHSTGFIVNALVSMYAK---NDDLSAARRLFDGFQEKGDAVLWNSIL 256
Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
+ Y S G+ E ++LF +M APN +T S L AC + + ++++ +K
Sbjct: 257 SSYSTS-GKSLETLELFREMHMTGPAPNSYTIVSALTACDGFSYAKLGKEIHASVLKSST 315
Query: 420 ALDDC-VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLH 478
+ V N+LI+MY R G+M A + + ++V++N+++ Y +NL ++A E
Sbjct: 316 HSSELYVCNALIAMYTRCGKMPQAERILRQMNNADVVTWNSLIKGYVQNLMYKEALEFFS 375
Query: 479 EIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCA 538
++ G + + S+++ + + + G ++HA +IK G++SN + N LI MYS+C
Sbjct: 376 DMIAAGHKSDEVSMTSIIAASGRLSNLLAGMELHAYVIKHGWDSNLQVGNTLIDMYSKCN 435
Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
+ F M D+++ISWT++I G+A++ ALE+F + ++ + + ++L
Sbjct: 436 LTCYMGRAFLRMHDKDLISWTTVIAGYAQNDCHVEALELFRDVAKKRMEIDEMILGSILR 495
Query: 599 ACS---HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLS 655
A S ++ E H ++Q +VD+ G+ ++ A S+
Sbjct: 496 ASSVLKSMLIVKEIHCHILRKGLLDTVIQNE-----LVDVYGKCRNMGYATRVFESIK-G 549
Query: 656 ADVLVWRTFLGACRVHGD----TELGKHAAEMILEQD 688
DV+ W + + + ++G+ EL + E L D
Sbjct: 550 KDVVSWTSMISSSALNGNESEAVELFRRMVETGLSAD 586
>sp|Q9SMZ2|PP347_ARATH Pentatricopeptide repeat-containing protein At4g33170
OS=Arabidopsis thaliana GN=PCMP-H53 PE=3 SV=1
Length = 990
Score = 535 bits (1379), Expect = e-151, Method: Compositional matrix adjust.
Identities = 303/822 (36%), Positives = 476/822 (57%), Gaps = 34/822 (4%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI----RSRNFHLGKLVHSLLTRSK 108
+L G+V++ + M + D+ ++L+LK+ + + L HS S
Sbjct: 190 YLKFGKVKEGKVLFEEMPYR----DVVLWNLMLKAYLEMGFKEEAIDLSSAFHS----SG 241
Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMI------SSYVNRGKQV 162
L PN + L L + GD ++A ++ KS N D S S +I S Y++ G+
Sbjct: 242 LNPNEITLRLLARI---SGDDSDAGQV-KSFANGNDASSVSEIIFRNKGLSEYLHSGQYS 297
Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
+ F +M+E ++ F ++ +++A+G ++ LK G D + V +L
Sbjct: 298 ALLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLG-LDLMLTVSNSL 356
Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
I+M+ K A VFD M+E++ + W +I Q G +A+ LF+ ++ G PD
Sbjct: 357 INMYCKLR-KFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPD 415
Query: 283 RFTLSGVVSACSEL-ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK--CTVDGSVDD 339
++T++ V+ A S L E + KQ+H AI+ D V +L+D Y++ C + +
Sbjct: 416 QYTMTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEAEILF 475
Query: 340 SRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACG 399
R FD +++W A++ GY QS K +KLF+ M + + FT A+V K CG
Sbjct: 476 ERHNFD------LVAWNAMMAGYTQSHDGHK-TLKLFALMHKQGERSDDFTLATVFKTCG 528
Query: 400 NLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNT 459
L N +QV+ +A+K G LD V + ++ MY + G M A+ AF+S+ + V++ T
Sbjct: 529 FLFAINQGKQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDVAWTT 588
Query: 460 MVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
M+ +N E+AF + ++ GV +T A+L +S + A+ +G QIHA +K
Sbjct: 589 MISGCIENGEEERAFHVFSQMRLMGVLPDEFTIATLAKASSCLTALEQGRQIHANALKLN 648
Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
++ + +L+ MY++C +++ A+ +FK +E N+ +W +M+ G A+HG L++F
Sbjct: 649 CTNDPFVGTSLVDMYAKCGSIDDAYCLFKRIEMMNITAWNAMLVGLAQHGEGKETLQLFK 708
Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
+M + GIKP+ +T+I VLSACSH+GL+SE +KH RSM+ ++GI +EHY+C+ D LGR+
Sbjct: 709 QMKSLGIKPDKVTFIGVLSACSHSGLVSEAYKHMRSMHGDYGIKPEIEHYSCLADALGRA 768
Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
G + +A I SM + A ++RT L ACRV GDTE GK A +LE +P D +A++LLS
Sbjct: 769 GLVKQAENLIESMSMEASASMYRTLLAACRVQGDTETGKRVATKLLELEPLDSSAYVLLS 828
Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
N+YA+A W+ + R MK + K+ G SWIE NK+H F V + S+ +T IY ++
Sbjct: 829 NMYAAASKWDEMKLARTMMKGHKVKKDPGFSWIEVKNKIHIFVVDDRSNRQTELIYRKVK 888
Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
+ IK+ GY+P+T+F L ++EEE+K + L+ HSEK+AVAFGL+ST S PIRV KNLR
Sbjct: 889 DMIRDIKQEGYVPETDFTLVDVEEEEKERALYYHSEKLAVAFGLLSTPPSTPIRVIKNLR 948
Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
VCGDCH A+KYI+ V REIVLRD+NRFH KDG CSC DYW
Sbjct: 949 VCGDCHNAMKYIAKVYNREIVLRDANRFHRFKDGICSCGDYW 990
Score = 174 bits (440), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 151/609 (24%), Positives = 281/609 (46%), Gaps = 62/609 (10%)
Query: 84 LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
L++ I S + LGK H+ + + P ++N+LIS+YSKCG L A ++F M + R
Sbjct: 45 FLRNAITSSDLMLGKCTHARILTFEENPERFLINNLISMYSKCGSLTYARRVFDKMPD-R 103
Query: 144 DIVSWSSMISSYVNRGKQV-----DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI 198
D+VSW+S++++Y + V A +F + + + S +++ C ++ V
Sbjct: 104 DLVSWNSILAAYAQSSECVVENIQQAFLLFRILRQDVVYTSRMTLSPMLKLCLHSGYVWA 163
Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITR 257
+G+ K G D D V AL+++++K G V + +F++M ++ V W LM+
Sbjct: 164 SESFHGYACKIG-LDGDEFVAGALVNIYLKFGKV--KEGKVLFEEMPYRDVVLWNLMLKA 220
Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTL------SGVVSACSELELFTSGKQLHSWAIR 311
++G +AI L SG P+ TL SG S +++ F +G
Sbjct: 221 YLEMGFKEEAIDLSSAFHSSGLNPNEITLRLLARISGDDSDAGQVKSFANG--------- 271
Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
+D+ V + + + +S Y+ S G+
Sbjct: 272 --------------------------NDASSVSEIIFRNKGLS------EYLHS-GQYSA 298
Query: 372 AVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLIS 431
+K F+DM++ V + TF +L + + +QV+ A+K G L V NSLI+
Sbjct: 299 LLKCFADMVESDVECDQVTFILMLATAVKVDSLALGQQVHCMALKLGLDLMLTVSNSLIN 358
Query: 432 MYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYT 491
MY + + AR F+++ E++L+S+N+++ A+N +A L ++ G+ YT
Sbjct: 359 MYCKLRKFGFARTVFDNMSERDLISWNSVIAGIAQNGLEVEAVCLFMQLLRCGLKPDQYT 418
Query: 492 FASLLSGASSI-GAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
S+L ASS+ + +Q+H IK S+ + ALI YSR ++ A ++ E
Sbjct: 419 MTSVLKAASSLPEGLSLSKQVHVHAIKINNVSDSFVSTALIDAYSRNRCMKEA-EILFER 477
Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
+ ++++W +M+ G+ + + L++F M G + + T V C I++G
Sbjct: 478 HNFDLVAWNAMMAGYTQSHDGHKTLKLFALMHKQGERSDDFTLATVFKTCGFLFAINQG- 536
Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRV 670
K + + G + + ++D+ + G ++ A S+P+ DV W T + C
Sbjct: 537 KQVHAYAIKSGYDLDLWVSSGILDMYVKCGDMSAAQFAFDSIPVPDDV-AWTTMISGCIE 595
Query: 671 HGDTELGKH 679
+G+ E H
Sbjct: 596 NGEEERAFH 604
>sp|Q9SN39|PP320_ARATH Pentatricopeptide repeat-containing protein At4g18750,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H45 PE=2
SV=1
Length = 871
Score = 534 bits (1375), Expect = e-150, Method: Compositional matrix adjust.
Identities = 278/788 (35%), Positives = 468/788 (59%), Gaps = 10/788 (1%)
Query: 77 DLDTYSL--LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANK 134
D+D +L +L+ C S++ GK V + + + +S + + L +Y+ CGDL EA++
Sbjct: 91 DIDPRTLCSVLQLCADSKSLKDGKEVDNFIRGNGFVIDSNLGSKLSLMYTNCGDLKEASR 150
Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
+F + ++ + W+ +++ G +I +F +M+ G + Y FS V ++ S+
Sbjct: 151 VFDEVKIEKALF-WNILMNELAKSGDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLR 209
Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
+V G ++GF+LK G+ + + VG +L+ ++K ++SA KVFD+MTE++ + W +
Sbjct: 210 SVHGGEQLHGFILKSGFGERN-SVGNSLVAFYLKNQ-RVDSARKVFDEMTERDVISWNSI 267
Query: 255 ITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
I G + +F+ M++SG D T+ V + C++ L + G+ +HS ++
Sbjct: 268 INGYVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACF 327
Query: 315 ALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVK 374
+ + +L+DMY+KC G +D ++ VF M D +V+S+T++I GY + G EAVK
Sbjct: 328 SREDRFCNTLLDMYSKC---GDLDSAKAVFREMSDRSVVSYTSMIAGYAREG-LAGEAVK 383
Query: 375 LFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
LF +M + ++P+ +T +VL C + ++V+ + D V N+L+ MYA
Sbjct: 384 LFEEMEEEGISPDVYTVTAVLNCCARYRLLDEGKRVHEWIKENDLGFDIFVSNALMDMYA 443
Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI-EDTGVGTSAYTFA 493
+ G M++A F + K+++S+NT++ Y+KN + +A L + + E+ T A
Sbjct: 444 KCGSMQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLFNLLLEEKRFSPDERTVA 503
Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
+L +S+ A KG +IH I+++G+ S+ + N+L+ MY++C + A +F ++ +
Sbjct: 504 CVLPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASK 563
Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHF 613
+++SWT MI G+ HGF A+ +F +M GI+ + I+++++L ACSH+GL+ EGW+ F
Sbjct: 564 DLVSWTVMIAGYGMHGFGKEAIALFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFF 623
Query: 614 RSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGD 673
M E I +EHYAC+VD+L R+G L +A FI +MP+ D +W L CR+H D
Sbjct: 624 NIMRHECKIEPTVEHYACIVDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHD 683
Query: 674 TELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIE 733
+L + AE + E +P++ ++L++N+YA A WE V +RKR+ +R L K GCSWIE
Sbjct: 684 VKLAEKVAEKVFELEPENTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGLRKNPGCSWIE 743
Query: 734 ADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQH 793
+V+ F G++S+P+T I A L ++ ++ E GY P T + L + EE +K + L H
Sbjct: 744 IKGRVNIFVAGDSSNPETENIEAFLRKVRARMIEEGYSPLTKYALIDAEEMEKEEALCGH 803
Query: 794 SEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDG 853
SEK+A+A G+IS+ K IRV KNLRVCGDCH K++S +T REIVLRDSNRFH KDG
Sbjct: 804 SEKLAMALGIISSGHGKIIRVTKNLRVCGDCHEMAKFMSKLTRREIVLRDSNRFHQFKDG 863
Query: 854 KCSCNDYW 861
CSC +W
Sbjct: 864 HCSCRGFW 871
Score = 219 bits (558), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 154/573 (26%), Positives = 282/573 (49%), Gaps = 20/573 (3%)
Query: 57 GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
G +I M G D T+S + KS R+ H G+ +H + +S + +
Sbjct: 174 GDFSGSIGLFKKMMSSGVEMDSYTFSCVSKSFSSLRSVHGGEQLHGFILKSGFGERNSVG 233
Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
NSL++ Y K ++ A K+F M +RD++SW+S+I+ YV+ G + +FV+ML G
Sbjct: 234 NSLVAFYLKNQRVDSARKVFDEM-TERDVISWNSIINGYVSNGLAEKGLSVFVQMLVSGI 292
Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
+ +V C+++ +++G ++ +K + D L+DM+ K DL+SA
Sbjct: 293 EIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSREDRFCN-TLLDMYSKCG-DLDSA 350
Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
VF +M++++ V +T MI + G +A++LF +M G PD +T++ V++ C+
Sbjct: 351 KAVFREMSDRSVVSYTSMIAGYAREGLAGEAVKLFEEMEEEGISPDVYTVTAVLNCCARY 410
Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
L GK++H W L D+ V +L+DMYAKC GS+ ++ VF M +++SW
Sbjct: 411 RLLDEGKRVHEWIKENDLGFDIFVSNALMDMYAKC---GSMQEAELVFSEMRVKDIISWN 467
Query: 357 AIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
II GY ++ + EA+ LF+ ++ + + +P+ T A VL AC +L + +++ + +
Sbjct: 468 TIIGGYSKNCYAN-EALSLFNLLLEEKRFSPDERTVACVLPACASLSAFDKGREIHGYIM 526
Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
+ G D V NSL+ MYA+ G + A F+ + K+LVS+ M+ Y + ++A
Sbjct: 527 RNGYFSDRHVANSLVDMYAKCGALLLAHMLFDDIASKDLVSWTVMIAGYGMHGFGKEAIA 586
Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI-----HARIIKSGFESNHCIYNAL 530
L +++ G+ +F SLL S G + +G + H I+ E CI
Sbjct: 587 LFNQMRQAGIEADEISFVSLLYACSHSGLVDEGWRFFNIMRHECKIEPTVEHYACI---- 642
Query: 531 ISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
+ M +R ++ A++ + M + W +++ G H A ++ K+ ++P
Sbjct: 643 VDMLARTGDLIKAYRFIENMPIPPDATIWGALLCGCRIHHDVKLAEKVAEKVFE--LEPE 700
Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
Y +++ E K R + G+
Sbjct: 701 NTGYYVLMANIYAEAEKWEQVKRLRKRIGQRGL 733
Score = 177 bits (450), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 114/349 (32%), Positives = 188/349 (53%), Gaps = 12/349 (3%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
++++G +K + M G DL T + C SR LG+ VHS+ ++
Sbjct: 271 YVSNGLAEKGLSVFVQMLVSGIEIDLATIVSVFAGCADSRLISLGRAVHSIGVKACFSRE 330
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
N+L+ +YSKCGDL+ A +F+ M + R +VS++SMI+ Y G +A+ +F EM
Sbjct: 331 DRFCNTLLDMYSKCGDLDSAKAVFREMSD-RSVVSYTSMIAGYAREGLAGEAVKLFEEME 389
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV 231
E G P+ Y +AV+ C+ + G ++ + +K D+ V AL+DM+ K GS
Sbjct: 390 EEGISPDVYTVTAVLNCCARYRLLDEGKRVHEW-IKENDLGFDIFVSNALMDMYAKCGS- 447
Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGV 289
++ A VF +M K+ + W +I ++ +A+ LF +++L F PD T++ V
Sbjct: 448 -MQEAELVFSEMRVKDIISWNTIIGGYSKNCYANEALSLF-NLLLEEKRFSPDERTVACV 505
Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
+ AC+ L F G+++H + +R G D V SLVDMYAKC G++ + +FD +
Sbjct: 506 LPACASLSAFDKGREIHGYIMRNGYFSDRHVANSLVDMYAKC---GALLLAHMLFDDIAS 562
Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
+++SWT +I GY G KEA+ LF+ M Q + + +F S+L AC
Sbjct: 563 KDLVSWTVMIAGYGMH-GFGKEAIALFNQMRQAGIEADEISFVSLLYAC 610
>sp|Q9FIB2|PP373_ARATH Putative pentatricopeptide repeat-containing protein At5g09950
OS=Arabidopsis thaliana GN=PCMP-H35 PE=3 SV=1
Length = 995
Score = 531 bits (1368), Expect = e-150, Method: Compositional matrix adjust.
Identities = 302/817 (36%), Positives = 482/817 (58%), Gaps = 18/817 (2%)
Query: 57 GRVQKAIFTLDLMTQKGNHPDLDTY-SLLLKSC-IRSRNFHLGKLVHSLLTRSKLEPNSV 114
G + A M G+ P T+ SL+ +C + + L + + + +S L +
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLLEQIMCTIQKSGLLTDLF 244
Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
+ + L+S ++K G L+ A K+F M R+ V+ + ++ V + +A +F++M +
Sbjct: 245 VGSGLVSAFAKSGSLSYARKVFNQM-ETRNAVTLNGLMVGLVRQKWGEEATKLFMDMNSM 303
Query: 175 -GFCPNEYC-FSAVIRACSNTENVAI--GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
P Y + S E V + G ++G ++ G D V +G L++M+ K G
Sbjct: 304 IDVSPESYVILLSSFPEYSLAEEVGLKKGREVHGHVITTGLVDFMVGIGNGLVNMYAKCG 363
Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
S+ A +VF MT+K++V W MIT Q GC +A+ + M LP FTL
Sbjct: 364 SI--ADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRRHDILPGSFTLISS 421
Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
+S+C+ L+ G+Q+H +++ G+ L+V V +L+ +YA+ G +++ RK+F M +
Sbjct: 422 LSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAE---TGYLNECRKIFSSMPE 478
Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
H+ +SW +II +S EAV F + + N TF+SVL A +L + +Q
Sbjct: 479 HDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITFSSVLSAVSSLSFGELGKQ 538
Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-NLVSYNTMVDAYAKNL 468
++ A+K A + N+LI+ Y + G M+ K F + E+ + V++N+M+ Y N
Sbjct: 539 IHGLALKNNIADEATTENALIACYGKCGEMDGCEKIFSRMAERRDNVTWNSMISGYIHNE 598
Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
KA +L+ + TG ++ +A++LS +S+ + +G ++HA +++ ES+ + +
Sbjct: 599 LLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESDVVVGS 658
Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-IK 587
AL+ MYS+C ++ A + F M RN SW SMI+G+A+HG AL++F M DG
Sbjct: 659 ALVDMYSKCGRLDYALRFFNTMPVRNSYSWNSMISGYARHGQGEEALKLFETMKLDGQTP 718
Query: 588 PNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALE 647
P+ +T++ VLSACSHAGL+ EG+KHF SM D +G+ R+EH++CM D+LGR+G L + +
Sbjct: 719 PDHVTFVGVLSACSHAGLLEEGFKHFESMSDSYGLAPRIEHFSCMADVLGRAGELDKLED 778
Query: 648 FIRSMPLSADVLVWRTFLGAC-RVHG-DTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
FI MP+ +VL+WRT LGAC R +G ELGK AAEM+ + +P++ ++LL N+YA+
Sbjct: 779 FIEKMPMKPNVLIWRTVLGACCRANGRKAELGKKAAEMLFQLEPENAVNYVLLGNMYAAG 838
Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
G WE + RK+MK+ ++ KEAG SW+ + VH F G+ SHP IY +L +L K+
Sbjct: 839 GRWEDLVKARKKMKDADVKKEAGYSWVTMKDGVHMFVAGDKSHPDADVIYKKLKELNRKM 898
Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLRVCGDC 824
++ GY+P T F L++LE+E K + L HSEK+AVAF L + S + PIR+ KNLRVCGDC
Sbjct: 899 RDAGYVPQTGFALYDLEQENKEEILSYHSEKLAVAFVLAAQRSSTLPIRIMKNLRVCGDC 958
Query: 825 HTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
H+A KYIS + GR+I+LRDSNRFHH +DG CSC+D+W
Sbjct: 959 HSAFKYISKIEGRQIILRDSNRFHHFQDGACSCSDFW 995
Score = 200 bits (509), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 156/532 (29%), Positives = 262/532 (49%), Gaps = 42/532 (7%)
Query: 84 LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
++SC+ R + HS L +++L+ + + N+LI+ Y + GD A K+F M R
Sbjct: 9 FVQSCVGHRG--AARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEM-PLR 65
Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI--GHI 201
+ VSW+ ++S Y G+ +A+ +M++ G N+Y F +V+RAC +V I G
Sbjct: 66 NCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSVGILFGRQ 125
Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
I+G + K Y D V LI M+ K + A F + KN+V W +I+ +Q
Sbjct: 126 IHGLMFKLSY-AVDAVVSNVLISMYWKCIGSVGYALCAFGDIEVKNSVSWNSIISVYSQA 184
Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVV-SACS----ELELFTSGKQLHSWAIRTGLAL 316
G R A R+F M G P +T +V +ACS ++ L +Q+ ++GL
Sbjct: 185 GDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSLTEPDVRLL---EQIMCTIQKSGLLT 241
Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV-QSGGRDKEAVKL 375
D+ VG LV +AK GS+ +RKVF++M N ++ ++ G V Q G +EA KL
Sbjct: 242 DLFVGSGLVSAFAK---SGSLSYARKVFNQMETRNAVTLNGLMVGLVRQKWG--EEATKL 296
Query: 376 FSDMIQG-QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV--------- 425
F DM V+P + + + ++AE+V +K+GR + V
Sbjct: 297 FMDMNSMIDVSPESYVI-----LLSSFPEYSLAEEV---GLKKGREVHGHVITTGLVDFM 348
Query: 426 ---GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
GN L++MYA+ G + DAR+ F + +K+ VS+N+M+ +N +A E +
Sbjct: 349 VGIGNGLVNMYAKCGSIADARRVFYFMTDKDSVSWNSMITGLDQNGCFIEAVERYKSMRR 408
Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
+ ++T S LS +S+ G+QIH +K G + N + NAL+++Y+ +
Sbjct: 409 HDILPGSFTLISSLSSCASLKWAKLGQQIHGESLKLGIDLNVSVSNALMTLYAETGYLNE 468
Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFA-ARALEIFYKMLADGIKPNGITY 593
++F M + + +SW S+I A+ + A+ F G K N IT+
Sbjct: 469 CRKIFSSMPEHDQVSWNSIIGALARSERSLPEAVVCFLNAQRAGQKLNRITF 520
Score = 105 bits (262), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 136/279 (48%), Gaps = 11/279 (3%)
Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVG 486
N+LI+ Y +G ARK F+ + +N VS+ +V Y++N ++A L ++ G+
Sbjct: 40 NNLINAYLETGDSVSARKVFDEMPLRNCVSWACIVSGYSRNGEHKEALVFLRDMVKEGIF 99
Query: 487 TSAYTFASLLSGASSIGAIGK--GEQIHARIIKSGFESNHCIYNALISMYSRC-ANVEAA 543
++ Y F S+L IG++G G QIH + K + + + N LISMY +C +V A
Sbjct: 100 SNQYAFVSVLRACQEIGSVGILFGRQIHGLMFKLSYAVDAVVSNVLISMYWKCIGSVGYA 159
Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIA-VLSACSH 602
F ++E +N +SW S+I+ +++ G A IF M DG +P T+ + V +ACS
Sbjct: 160 LCAFGDIEVKNSVSWNSIISVYSQAGDQRSAFRIFSSMQYDGSRPTEYTFGSLVTTACSL 219
Query: 603 AGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWR 662
+ + G++ + + +V +SGSL+ A + M V +
Sbjct: 220 TEPDVRLLEQIMCTIQKSGLLTDLFVGSGLVSAFAKSGSLSYARKVFNQMETRNAVTLNG 279
Query: 663 TFLGACRVHGDTELGKHAAEMILEQDPQ---DPAAHILL 698
+G R + G+ A ++ ++ + P ++++L
Sbjct: 280 LMVGLVR----QKWGEEATKLFMDMNSMIDVSPESYVIL 314
Score = 68.9 bits (167), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 2/142 (1%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
++++ + KA+ + M Q G D Y+ +L + G VH+ R+ LE +
Sbjct: 594 YIHNELLAKALDLVWFMLQTGQRLDSFMYATVLSAFASVATLERGMEVHACSVRACLESD 653
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM- 171
V+ ++L+ +YSKCG L+ A + F +M R+ SW+SMIS Y G+ +A+ +F M
Sbjct: 654 VVVGSALVDMYSKCGRLDYALRFFNTM-PVRNSYSWNSMISGYARHGQGEEALKLFETMK 712
Query: 172 LELGFCPNEYCFSAVIRACSNT 193
L+ P+ F V+ ACS+
Sbjct: 713 LDGQTPPDHVTFVGVLSACSHA 734
Score = 63.5 bits (153), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 57/107 (53%)
Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWT 559
S +G G H+R+ K+ + + + N LI+ Y + +A +VF EM RN +SW
Sbjct: 12 SCVGHRGAARFFHSRLYKNRLDKDVYLCNNLINAYLETGDSVSARKVFDEMPLRNCVSWA 71
Query: 560 SMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
+++G++++G AL M+ +GI N +++VL AC G +
Sbjct: 72 CIVSGYSRNGEHKEALVFLRDMVKEGIFSNQYAFVSVLRACQEIGSV 118
>sp|O81767|PP348_ARATH Pentatricopeptide repeat-containing protein At4g33990
OS=Arabidopsis thaliana GN=EMB2758 PE=3 SV=2
Length = 823
Score = 529 bits (1363), Expect = e-149, Method: Compositional matrix adjust.
Identities = 295/796 (37%), Positives = 457/796 (57%), Gaps = 23/796 (2%)
Query: 71 QKGNH-PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDL 129
+ GN ++D L + C N K +H+ L SK N I L++LY G++
Sbjct: 46 KNGNESKEIDDVHTLFRYCT---NLQSAKCLHARLVVSKQIQNVCISAKLVNLYCYLGNV 102
Query: 130 NEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF-VEMLELGFCPNEYCFSAVIR 188
A F + N RD+ +W+ MIS Y G + I F + ML G P+ F +V++
Sbjct: 103 ALARHTFDHIQN-RDVYAWNLMISGYGRAGNSSEVIRCFSLFMLSSGLTPDYRTFPSVLK 161
Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
AC V G+ I+ LK G F DV V +LI ++ + + +A +FD+M ++
Sbjct: 162 AC---RTVIDGNKIHCLALKFG-FMWDVYVAASLIHLYSRYKA-VGNARILFDEMPVRDM 216
Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSGVVSACSELELFTSGKQLHS 307
W MI+ Q G ++A+ L +G D T+ ++SAC+E F G +HS
Sbjct: 217 GSWNAMISGYCQSGNAKEALTLS-----NGLRAMDSVTVVSLLSACTEAGDFNRGVTIHS 271
Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
++I+ GL ++ V L+D+YA+ G + D +KVFDRM +++SW +II Y +
Sbjct: 272 YSIKHGLESELFVSNKLIDLYAEF---GRLRDCQKVFDRMYVRDLISWNSIIKAY-ELNE 327
Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD-CVG 426
+ A+ LF +M ++ P+ T S+ L D V +++G L+D +G
Sbjct: 328 QPLRAISLFQEMRLSRIQPDCLTLISLASILSQLGDIRACRSVQGFTLRKGWFLEDITIG 387
Query: 427 NSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-V 485
N+++ MYA+ G ++ AR F L +++S+NT++ YA+N + +A E+ + +E+ G +
Sbjct: 388 NAVVVMYAKLGLVDSARAVFNWLPNTDVISWNTIISGYAQNGFASEAIEMYNIMEEEGEI 447
Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
+ T+ S+L S GA+ +G ++H R++K+G + + +L MY +C +E A
Sbjct: 448 AANQGTWVSVLPACSQAGALRQGMKLHGRLLKNGLYLDVFVVTSLADMYGKCGRLEDALS 507
Query: 546 VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGL 605
+F ++ N + W ++I HG +A+ +F +ML +G+KP+ IT++ +LSACSH+GL
Sbjct: 508 LFYQIPRVNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGL 567
Query: 606 ISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFL 665
+ EG F M ++GI ++HY CMVD+ GR+G L AL+FI+SM L D +W L
Sbjct: 568 VDEGQWCFEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALL 627
Query: 666 GACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIK 725
ACRVHG+ +LGK A+E + E +P+ H+LLSN+YASAG WE V IR + L K
Sbjct: 628 SACRVHGNVDLGKIASEHLFEVEPEHVGYHVLLSNMYASAGKWEGVDEIRSIAHGKGLRK 687
Query: 726 EAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQ 785
G S +E DNKV F+ G +HP E+Y EL L K+K GY+PD FVL ++E+++
Sbjct: 688 TPGWSSMEVDNKVEVFYTGNQTHPMYEEMYRELTALQAKLKMIGYVPDHRFVLQDVEDDE 747
Query: 786 KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSN 845
K L HSE++A+AF LI+T IR+FKNLRVCGDCH+ K+IS +T REI++RDSN
Sbjct: 748 KEHILMSHSERLAIAFALIATPAKTTIRIFKNLRVCGDCHSVTKFISKITEREIIVRDSN 807
Query: 846 RFHHIKDGKCSCNDYW 861
RFHH K+G CSC DYW
Sbjct: 808 RFHHFKNGVCSCGDYW 823
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 64/143 (44%), Gaps = 8/143 (5%)
Query: 41 TTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLV 100
S P + + H G +KA+ M +G PD T+ LL +C S G+
Sbjct: 515 VNSVPWNTLIACHGFHGHGEKAVMLFKEMLDEGVKPDHITFVTLLSACSHSGLVDEGQWC 574
Query: 101 HSLL-TRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS----- 154
++ T + P+ ++ +Y + G L A K KSM + D W +++S+
Sbjct: 575 FEMMQTDYGITPSLKHYGCMVDMYGRAGQLETALKFIKSMSLQPDASIWGALLSACRVHG 634
Query: 155 YVNRGKQVDAIHMF-VEMLELGF 176
V+ GK + + H+F VE +G+
Sbjct: 635 NVDLGK-IASEHLFEVEPEHVGY 656
>sp|Q9LFL5|PP390_ARATH Pentatricopeptide repeat-containing protein At5g16860
OS=Arabidopsis thaliana GN=PCMP-H92 PE=2 SV=1
Length = 850
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 300/816 (36%), Positives = 454/816 (55%), Gaps = 62/816 (7%)
Query: 98 KLVHS-LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSY 155
KL+H LL+ L N + + LIS Y G L+ A + + + + W+S+I SY
Sbjct: 45 KLIHQKLLSFGILTLN--LTSHLISTYISVGCLSHAVSLLRRFPPSDAGVYHWNSLIRSY 102
Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
+ G +++F M L + P+ Y F V +AC +V G + L G F S+
Sbjct: 103 GDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRCGESAHALSLVTG-FISN 161
Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
V VG AL+ M+ + L A KVFD+M+ + V W +I +LG P+ A+ +F M
Sbjct: 162 VFVGNALVAMYSRCR-SLSDARKVFDEMSVWDVVSWNSIIESYAKLGKPKVALEMFSRMT 220
Query: 276 LS-GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
G PD TL V+ C+ L + GKQLH +A+ + + ++ VG LVDMYAKC
Sbjct: 221 NEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQNMFVGNCLVDMYAKC--- 277
Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS----------------- 377
G +D++ VF M +V+SW A++ GY Q G R ++AV+LF
Sbjct: 278 GMMDEANTVFSNMSVKDVVSWNAMVAGYSQIG-RFEDAVRLFEKMQEEKIKMDVVTWSAA 336
Query: 378 ------------------DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK--- 416
M+ + PN T SVL C ++ ++++ +A+K
Sbjct: 337 ISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALMHGKEIHCYAIKYPI 396
Query: 417 ----RGRALDDCVGNSLISMYARSGRMEDARKAFESLF--EKNLVSYNTMVDAYAKNLNS 470
G ++ V N LI MYA+ +++ AR F+SL E+++V++ M+ Y+++ ++
Sbjct: 397 DLRKNGHGDENMVINQLIDMYAKCKKVDTARAMFDSLSPKERDVVTWTVMIGGYSQHGDA 456
Query: 471 EKAFELLHEI--EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC--- 525
KA ELL E+ ED +A+T + L +S+ A+ G+QIHA +++ + N
Sbjct: 457 NKALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQIHAYALRN--QQNAVPLF 514
Query: 526 IYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
+ N LI MY++C ++ A VF M +N ++WTS++TG+ HG+ AL IF +M G
Sbjct: 515 VSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHGYGEEALGIFDEMRRIG 574
Query: 586 IKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA 645
K +G+T + VL ACSH+G+I +G ++F M G+ EHYAC+VDLLGR+G L A
Sbjct: 575 FKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEHYACLVDLLGRAGRLNAA 634
Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
L I MP+ +VW FL CR+HG ELG++AAE I E ++ LLSNLYA+A
Sbjct: 635 LRLIEEMPMEPPPVVWVAFLSCCRIHGKVELGEYAAEKITELASNHDGSYTLLSNLYANA 694
Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
G W+ V IR M+ + + K GCSW+E F VG+ +HP EIY L +I
Sbjct: 695 GRWKDVTRIRSLMRHKGVKKRPGCSWVEGIKGTTTFFVGDKTHPHAKEIYQVLLDHMQRI 754
Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
K+ GY+P+T F LH++++E+K LF+HSEK+A+A+G+++T + IR+ KNLRVCGDCH
Sbjct: 755 KDIGYVPETGFALHDVDDEEKDDLLFEHSEKLALAYGILTTPQGAAIRITKNLRVCGDCH 814
Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
TA Y+S + +I+LRDS+RFHH K+G CSC YW
Sbjct: 815 TAFTYMSRIIDHDIILRDSSRFHHFKNGSCSCKGYW 850
Score = 218 bits (556), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 162/587 (27%), Positives = 276/587 (47%), Gaps = 73/587 (12%)
Query: 45 PLSNRLIYHLN--------DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
P S+ +YH N +G K ++ LM PD T+ + K+C +
Sbjct: 86 PPSDAGVYHWNSLIRSYGDNGCANKCLYLFGLMHSLSWTPDNYTFPFVFKACGEISSVRC 145
Query: 97 GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
G+ H+L + N + N+L+++YS+C L++A K+F M + D+VSW+S+I SY
Sbjct: 146 GESAHALSLVTGFISNVFVGNALVAMYSRCRSLSDARKVFDEM-SVWDVVSWNSIIESYA 204
Query: 157 NRGKQVDAIHMFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSD 215
GK A+ MF M E G P+ V+ C++ ++G ++ F + +
Sbjct: 205 KLGKPKVALEMFSRMTNEFGCRPDNITLVNVLPPCASLGTHSLGKQLHCFAVTSEMIQ-N 263
Query: 216 VCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLF---- 271
+ VG L+DM+ K + ++ A VF M+ K+ V W M+ +Q+G DA+RLF
Sbjct: 264 MFVGNCLVDMYAKCGM-MDEANTVFSNMSVKDVVSWNAMVAGYSQIGRFEDAVRLFEKMQ 322
Query: 272 -------------------------------LDMILSGFLPDRFTLSGVVSACSELELFT 300
M+ SG P+ TL V+S C+ +
Sbjct: 323 EEKIKMDVVTWSAAISGYAQRGLGYEALGVCRQMLSSGIKPNEVTLISVLSGCASVGALM 382
Query: 301 SGKQLHSWAIRTGLAL-------DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM--LDHN 351
GK++H +AI+ + L + V L+DMYAKC VD +R +FD + + +
Sbjct: 383 HGKEIHCYAIKYPIDLRKNGHGDENMVINQLIDMYAKCK---KVDTARAMFDSLSPKERD 439
Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQ 409
V++WT +I GY Q G +K A++L S+M + Q PN FT + L AC +L + +Q
Sbjct: 440 VVTWTVMIGGYSQHGDANK-ALELLSEMFEEDCQTRPNAFTISCALVACASLAALRIGKQ 498
Query: 410 VYTHAVK-RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
++ +A++ + A+ V N LI MYA+ G + DAR F+++ KN V++ +++ Y +
Sbjct: 499 IHAYALRNQQNAVPLFVSNCLIDMYAKCGSISDARLVFDNMMAKNEVTWTSLMTGYGMHG 558
Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARI-----IKSGFESN 523
E+A + E+ G T +L S G I +G + R+ + G E
Sbjct: 559 YGEEALGIFDEMRRIGFKLDGVTLLVVLYACSHSGMIDQGMEYFNRMKTVFGVSPGPEH- 617
Query: 524 HCIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG 569
Y L+ + R + AA ++ +EM + + W + ++ HG
Sbjct: 618 ---YACLVDLLGRAGRLNAALRLIEEMPMEPPPVVWVAFLSCCRIHG 661
>sp|Q9SHZ8|PP168_ARATH Pentatricopeptide repeat-containing protein At2g22070
OS=Arabidopsis thaliana GN=PCMP-H41 PE=3 SV=1
Length = 786
Score = 523 bits (1346), Expect = e-147, Method: Compositional matrix adjust.
Identities = 280/695 (40%), Positives = 416/695 (59%), Gaps = 68/695 (9%)
Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
D++S + FD++ ++++V WT MI +G AIR+ DM+ G P +FTL+ V++
Sbjct: 95 DMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLA 154
Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
+ + +GK++HS+ ++ GL +V V SL++MYAKC G ++ VFDRM+ +
Sbjct: 155 SVAATRCMETGKKVHSFIVKLGLRGNVSVSNSLLNMYAKC---GDPMMAKFVFDRMVVRD 211
Query: 352 VMSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQ 381
+ SW A+I ++Q G G D A+ +FS M++
Sbjct: 212 ISSWNAMIALHMQVGQMDLAMAQFEQMAERDIVTWNSMISGFNQRGYDLRALDIFSKMLR 271
Query: 382 GQV-APNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
+ +P+ FT ASVL AC NL + +Q+++H V G + V N+LISMY+R G +E
Sbjct: 272 DSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISGIVLNALISMYSRCGGVE 331
Query: 441 DARKAFE---------------------------------SLFEKNLVSYNTMVDAYAKN 467
AR+ E SL ++++V++ M+ Y ++
Sbjct: 332 TARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQH 391
Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
+ +A L + G ++YT A++LS ASS+ ++ G+QIH +KSG + +
Sbjct: 392 GSYGEAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVS 451
Query: 528 NALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
NALI+MY++ N+ +A + F + +R+ +SWTSMI A+HG A ALE+F ML +G+
Sbjct: 452 NALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQHGHAEEALELFETMLMEGL 511
Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
+P+ ITY+ V SAC+HAGL+++G ++F M D I+ + HYACMVDL GR+G L EA
Sbjct: 512 RPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSHYACMVDLFGRAGLLQEAQ 571
Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAG 706
EFI MP+ DV+ W + L ACRVH + +LGK AAE +L +P++ A+ L+NLY++ G
Sbjct: 572 EFIEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPENSGAYSALANLYSACG 631
Query: 707 HWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK 766
WE A IRK MK+ + KE G SWIE +KVH F V + +HP+ EIY + ++ +IK
Sbjct: 632 KWEEAAKIRKSMKDGRVKKEQGFSWIEVKHKVHVFGVEDGTHPEKNEIYMTMKKIWDEIK 691
Query: 767 EFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHT 826
+ GY+PDT VLH+LEEE K Q L HSEK+A+AFGLIST +R+ KNLRVC DCHT
Sbjct: 692 KMGYVPDTASVLHDLEEEVKEQILRHHSEKLAIAFGLISTPDKTTLRIMKNLRVCNDCHT 751
Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
AIK+IS + GREI++RD+ RFHH KDG CSC DYW
Sbjct: 752 AIKFISKLVGREIIVRDTTRFHHFKDGFCSCRDYW 786
Score = 199 bits (506), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 156/585 (26%), Positives = 277/585 (47%), Gaps = 104/585 (17%)
Query: 82 SLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSM-- 139
+LL KS +S +LVH + +S L + ++N+L+++YSK G A K+F M
Sbjct: 18 NLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKTGYALHARKLFDEMPL 77
Query: 140 ----------------GN------------KRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
G+ +RD VSW++MI Y N G+ AI + +M
Sbjct: 78 RTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYKNIGQYHKAIRVMGDM 137
Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK--- 228
++ G P ++ + V+ + + T + G ++ F++K G +V V +L++M+ K
Sbjct: 138 VKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLG-LRGNVSVSNSLLNMYAKCGD 196
Query: 229 -----------------------------GSVDLESAYKVFDKMTEKNTVGWTLMITRCT 259
G +DL A F++M E++ V W MI+
Sbjct: 197 PMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQ--FEQMAERDIVTWNSMISGFN 254
Query: 260 QLGCPRDAIRLFLDMILSGFL-PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDV 318
Q G A+ +F M+ L PDRFTL+ V+SAC+ LE GKQ+HS + TG +
Sbjct: 255 QRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIHSHIVTTGFDISG 314
Query: 319 CVGCSLVDMYAKC--------------TVD----------------GSVDDSRKVFDRML 348
V +L+ MY++C T D G ++ ++ +F +
Sbjct: 315 IVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGDMNQAKNIFVSLK 374
Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
D +V++WTA+I GY Q G EA+ LF M+ G PN +T A++L +L + +
Sbjct: 375 DRDVVAWTAMIVGYEQHGSYG-EAINLFRSMVGGGQRPNSYTLAAMLSVASSLASLSHGK 433
Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF-EKNLVSYNTMVDAYAKN 467
Q++ AVK G V N+LI+MYA++G + A +AF+ + E++ VS+ +M+ A A++
Sbjct: 434 QIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERDTVSWTSMIIALAQH 493
Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ---IHARIIKSGFESNH 524
++E+A EL + G+ T+ + S + G + +G Q + + K +H
Sbjct: 494 GHAEEALELFETMLMEGLRPDHITYVGVFSACTHAGLVNQGRQYFDMMKDVDKIIPTLSH 553
Query: 525 CIYNALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
Y ++ ++ R ++ A + ++M + +V++W S+++ H
Sbjct: 554 --YACMVDLFGRAGLLQEAQEFIEKMPIEPDVVTWGSLLSACRVH 596
Score = 180 bits (457), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 160/572 (27%), Positives = 253/572 (44%), Gaps = 107/572 (18%)
Query: 50 LIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKL 109
++ + N G+ KAI + M ++G P T + +L S +R GK VHS + + L
Sbjct: 118 IVGYKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGL 177
Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSM------------------------------ 139
N + NSL+++Y+KCGD A +F M
Sbjct: 178 RGNVSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQ 237
Query: 140 GNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG-FCPNEYCFSAVIRACSNTENVAI 198
+RDIV+W+SMIS + RG + A+ +F +ML P+ + ++V+ AC+N E + I
Sbjct: 238 MAERDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCI 297
Query: 199 GHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV-------------------------- 231
G I+ ++ G FD V ALI M+ + G V
Sbjct: 298 GKQIHSHIVTTG-FDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDG 356
Query: 232 -----DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
D+ A +F + +++ V WT MI Q G +AI LF M+ G P+ +TL
Sbjct: 357 YIKLGDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTL 416
Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
+ ++S S L + GKQ+H A+++G V V +L+ MYAK G++ + + FD
Sbjct: 417 AAMLSVASSLASLSHGKQIHGSAVKSGEIYSVSVSNALITMYAKA---GNITSASRAFDL 473
Query: 347 M-LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSN 405
+ + + +SWT++I Q G +EA++LF M+ + P+H T+ V AC
Sbjct: 474 IRCERDTVSWTSMIIALAQH-GHAEEALELFETMLMEGLRPDHITYVGVFSAC------- 525
Query: 406 VAEQVYTHA--VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA 463
THA V +GR D M+D K +L Y MVD
Sbjct: 526 ------THAGLVNQGRQYFDM--------------MKDVDKIIPTLSH-----YACMVDL 560
Query: 464 YAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESN 523
+ + ++A E IE + T+ SLLS I G+ R++ E N
Sbjct: 561 FGRAGLLQEAQEF---IEKMPIEPDVVTWGSLLSACRVHKNIDLGKVAAERLLLLEPE-N 616
Query: 524 HCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
Y+AL ++YS C E A ++ K M+D V
Sbjct: 617 SGAYSALANLYSACGKWEEAAKIRKSMKDGRV 648
Score = 146 bits (369), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 122/539 (22%), Positives = 230/539 (42%), Gaps = 109/539 (20%)
Query: 281 PDRFTLSGVVSACSELELFTSGKQ--------LHSWAIRTGLALDVCVGCSLVDMYAKCT 332
P +LS ++ C+ L + K +H I++GL V + +L+++Y+K
Sbjct: 4 PVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT- 62
Query: 333 VDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSG-------------------------- 366
G +RK+FD M SW +++ Y + G
Sbjct: 63 --GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVG 120
Query: 367 ----GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
G+ +A+++ DM++ + P FT +VL + ++V++ VK G +
Sbjct: 121 YKNIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGN 180
Query: 423 DCVGNSLISMYARS-------------------------------GRMEDARKAFESLFE 451
V NSL++MYA+ G+M+ A FE + E
Sbjct: 181 VSVSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAE 240
Query: 452 KNLVSYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
+++V++N+M+ + + +A ++ + + D+ + +T AS+LS +++ + G+Q
Sbjct: 241 RDIVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQ 300
Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ------------------------- 545
IH+ I+ +GF+ + + NALISMYSRC VE A +
Sbjct: 301 IHSHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKL 360
Query: 546 --------VFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
+F ++DR+V++WT+MI G+ +HG A+ +F M+ G +PN T A+L
Sbjct: 361 GDMNQAKNIFVSLKDRDVVAWTAMIVGYEQHGSYGEAINLFRSMVGGGQRPNSYTLAAML 420
Query: 598 SACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSAD 657
S S +S G K + G + + ++ + ++G++T A + D
Sbjct: 421 SVASSLASLSHG-KQIHGSAVKSGEIYSVSVSNALITMYAKAGNITSASRAFDLIRCERD 479
Query: 658 VLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRK 716
+ W + + A HG E E +L + + HI ++++ H V R+
Sbjct: 480 TVSWTSMIIALAQHGHAEEALELFETMLMEGLRPD--HITYVGVFSACTHAGLVNQGRQ 536
Score = 111 bits (277), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 87/391 (22%), Positives = 173/391 (44%), Gaps = 104/391 (26%)
Query: 385 APNHFTFASVLKACGNLLDSNV--------AEQVYTHAVKRGRALDDCVGNSLISMYARS 436
AP + +++L+ C NLL +V A+ V+ +K G + N+L+++Y+++
Sbjct: 3 APVPLSLSTLLELCTNLLQKSVNKSNGRFTAQLVHCRVIKSGLMFSVYLMNNLMNVYSKT 62
Query: 437 GRMEDARKAFESLFEKNLVSYNTMVDAYAK--NLNS------------------------ 470
G ARK F+ + + S+NT++ AY+K +++S
Sbjct: 63 GYALHARKLFDEMPLRTAFSWNTVLSAYSKRGDMDSTCEFFDQLPQRDSVSWTTMIVGYK 122
Query: 471 -----EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHC 525
KA ++ ++ G+ + +T ++L+ ++ + G+++H+ I+K G N
Sbjct: 123 NIGQYHKAIRVMGDMVKEGIEPTQFTLTNVLASVAATRCMETGKKVHSFIVKLGLRGNVS 182
Query: 526 IYNALISMYSRCAN-------------------------------VEAAFQVFKEMEDRN 554
+ N+L++MY++C + ++ A F++M +R+
Sbjct: 183 VSNSLLNMYAKCGDPMMAKFVFDRMVVRDISSWNAMIALHMQVGQMDLAMAQFEQMAERD 242
Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADG-IKPNGITYIAVLSACS-----------H 602
+++W SMI+GF + G+ RAL+IF KML D + P+ T +VLSAC+ H
Sbjct: 243 IVTWNSMISGFNQRGYDLRALDIFSKMLRDSLLSPDRFTLASVLSACANLEKLCIGKQIH 302
Query: 603 AGLISEGW-------KHFRSMYDEHGIVQ--------------RMEHYACMVDLLGRSGS 641
+ +++ G+ SMY G V+ ++E + ++D + G
Sbjct: 303 SHIVTTGFDISGIVLNALISMYSRCGGVETARRLIEQRGTKDLKIEGFTALLDGYIKLGD 362
Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHG 672
+ +A S+ DV+ W + HG
Sbjct: 363 MNQAKNIFVSLK-DRDVVAWTAMIVGYEQHG 392
>sp|Q9SS60|PP210_ARATH Pentatricopeptide repeat-containing protein At3g03580
OS=Arabidopsis thaliana GN=PCMP-H23 PE=2 SV=1
Length = 882
Score = 509 bits (1311), Expect = e-143, Method: Compositional matrix adjust.
Identities = 285/787 (36%), Positives = 453/787 (57%), Gaps = 9/787 (1%)
Query: 76 PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
PD T+ ++K+C + +G LV+ + E + + N+L+ +YS+ G L A ++
Sbjct: 104 PDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFESDLFVGNALVDMYSRMGLLTRARQV 163
Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
F M RD+VSW+S+IS Y + G +A+ ++ E+ P+ + S+V+ A N
Sbjct: 164 FDEM-PVRDLVSWNSLISGYSSHGYYEEALEIYHELKNSWIVPDSFTVSSVLPAFGNLLV 222
Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
V G ++GF LK G V L+ M++K + A +VFD+M +++V + MI
Sbjct: 223 VKQGQGLHGFALKSGVNSVVVVNN-GLVAMYLKFRRPTD-ARRVFDEMDVRDSVSYNTMI 280
Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
+L +++R+FL+ L F PD T+S V+ AC L + K ++++ ++ G
Sbjct: 281 CGYLKLEMVEESVRMFLEN-LDQFKPDLLTVSSVLRACGHLRDLSLAKYIYNYMLKAGFV 339
Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
L+ V L+D+YAKC G + +R VF+ M + +SW +II+GY+QSG EA+KL
Sbjct: 340 LESTVRNILIDVYAKC---GDMITARDVFNSMECKDTVSWNSIISGYIQSGDL-MEAMKL 395
Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR 435
F M+ + +H T+ ++ L D + ++++ +K G +D V N+LI MYA+
Sbjct: 396 FKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICIDLSVSNALIDMYAK 455
Query: 436 SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
G + D+ K F S+ + V++NT++ A + + ++ ++ + V TF
Sbjct: 456 CGEVGDSLKIFSSMGTGDTVTWNTVISACVRFGDFATGLQVTTQMRKSEVVPDMATFLVT 515
Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
L +S+ A G++IH +++ G+ES I NALI MYS+C +E + +VF+ M R+V
Sbjct: 516 LPMCASLAAKRLGKEIHCCLLRFGYESELQIGNALIEMYSKCGCLENSSRVFERMSRRDV 575
Query: 556 ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRS 615
++WT MI + +G +ALE F M GI P+ + +IA++ ACSH+GL+ EG F
Sbjct: 576 VTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYACSHSGLVDEGLACFEK 635
Query: 616 MYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
M + I +EHYAC+VDLL RS +++A EFI++MP+ D +W + L ACR GD E
Sbjct: 636 MKTHYKIDPMIEHYACVVDLLSRSQKISKAEEFIQAMPIKPDASIWASVLRACRTSGDME 695
Query: 676 LGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEAD 735
+ + I+E +P DP IL SN YA+ W+ V+ IRK +K++++ K G SWIE
Sbjct: 696 TAERVSRRIIELNPDDPGYSILASNAYAALRKWDKVSLIRKSLKDKHITKNPGYSWIEVG 755
Query: 736 NKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL-EEEQKVQYLFQHS 794
VH F G+ S P++ IY L+ L + + GY+PD V L EEE+K + + HS
Sbjct: 756 KNVHVFSSGDDSAPQSEAIYKSLEILYSLMAKEGYIPDPREVSQNLEEEEEKRRLICGHS 815
Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
E++A+AFGL++T P++V KNLRVCGDCH K IS + GREI++RD+NRFH KDG
Sbjct: 816 ERLAIAFGLLNTEPGTPLQVMKNLRVCGDCHEVTKLISKIVGREILVRDANRFHLFKDGT 875
Query: 855 CSCNDYW 861
CSC D W
Sbjct: 876 CSCKDRW 882
Score = 156 bits (395), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 109/398 (27%), Positives = 205/398 (51%), Gaps = 9/398 (2%)
Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD-HNVMSWTAIITG 361
+++H+ I GL L+D Y+ S S VF R+ NV W +II
Sbjct: 24 RRIHALVISLGLDSSDFFSGKLIDKYSHFREPAS---SLSVFRRVSPAKNVYLWNSIIRA 80
Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
+ ++G EA++ + + + +V+P+ +TF SV+KAC L D+ + + VY + G
Sbjct: 81 FSKNG-LFPEALEFYGKLRESKVSPDKYTFPSVIKACAGLFDAEMGDLVYEQILDMGFES 139
Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
D VGN+L+ MY+R G + AR+ F+ + ++LVS+N+++ Y+ + E+A E+ HE++
Sbjct: 140 DLFVGNALVDMYSRMGLLTRARQVFDEMPVRDLVSWNSLISGYSSHGYYEEALEIYHELK 199
Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
++ + ++T +S+L ++ + +G+ +H +KSG S + N L++MY +
Sbjct: 200 NSWIVPDSFTVSSVLPAFGNLLVVKQGQGLHGFALKSGVNSVVVVNNGLVAMYLKFRRPT 259
Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
A +VF EM+ R+ +S+ +MI G+ K ++ +F + L D KP+ +T +VL AC
Sbjct: 260 DARRVFDEMDVRDSVSYNTMICGYLKLEMVEESVRMFLENL-DQFKPDLLTVSSVLRACG 318
Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
H +S K+ + + G V ++D+ + G + A + SM D + W
Sbjct: 319 HLRDLSLA-KYIYNYMLKAGFVLESTVRNILIDVYAKCGDMITARDVFNSME-CKDTVSW 376
Query: 662 RTFLGACRVHGD-TELGKHAAEMILEQDPQDPAAHILL 698
+ + GD E K M++ ++ D +++L
Sbjct: 377 NSIISGYIQSGDLMEAMKLFKMMMIMEEQADHITYLML 414
Score = 117 bits (292), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 95/358 (26%), Positives = 165/358 (46%), Gaps = 40/358 (11%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
++ G + +A+ +M D TY +L+ R + GK +HS +S + +
Sbjct: 383 YIQSGDLMEAMKLFKMMMIMEEQADHITYLMLISVSTRLADLKFGKGLHSNGIKSGICID 442
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
+ N+LI +Y+KCG++ ++ KIF SMG D V+W+++IS+ V G + + +M
Sbjct: 443 LSVSNALIDMYAKCGEVGDSLKIFSSMGTG-DTVTWNTVISACVRFGDFATGLQVTTQMR 501
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
+ P+ F + C++ +G I+ LL+ GY +S++ +G ALI+M+ K
Sbjct: 502 KSEVVPDMATFLVTLPMCASLAAKRLGKEIHCCLLRFGY-ESELQIGNALIEMYSKCGC- 559
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
LE++ +VF++M+ ++ V WT MI G A+ F DM SG +PD ++ A
Sbjct: 560 LENSSRVFERMSRRDVVTWTGMIYAYGMYGEGEKALETFADMEKSGIVPDSVVFIAIIYA 619
Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
CS HS + GLA + K +D M++H
Sbjct: 620 CS-----------HSGLVDEGLAC-----------FEKMKTHYKIDP-------MIEH-- 648
Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
A + + + +A + M + P+ +ASVL+AC D AE+V
Sbjct: 649 ---YACVVDLLSRSQKISKAEEFIQAM---PIKPDASIWASVLRACRTSGDMETAERV 700
Score = 68.2 bits (165), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/179 (28%), Positives = 83/179 (46%), Gaps = 7/179 (3%)
Query: 500 SSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED-RNVISW 558
SS + + +IHA +I G +S+ LI YS ++ VF+ + +NV W
Sbjct: 15 SSSSNLNELRRIHALVISLGLDSSDFFSGKLIDKYSHFREPASSLSVFRRVSPAKNVYLW 74
Query: 559 TSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE--GWKHFRSM 616
S+I F+K+G ALE + K+ + P+ T+ +V+ AC AGL G + +
Sbjct: 75 NSIIRAFSKNGLFPEALEFYGKLRESKVSPDKYTFPSVIKAC--AGLFDAEMGDLVYEQI 132
Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTE 675
D G + +VD+ R G LT A + MP+ D++ W + + HG E
Sbjct: 133 LD-MGFESDLFVGNALVDMYSRMGLLTRARQVFDEMPVR-DLVSWNSLISGYSSHGYYE 189
>sp|Q9LYV3|PP377_ARATH Putative pentatricopeptide repeat-containing protein At5g13230,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H89 PE=3
SV=1
Length = 822
Score = 498 bits (1281), Expect = e-139, Method: Compositional matrix adjust.
Identities = 295/824 (35%), Positives = 460/824 (55%), Gaps = 23/824 (2%)
Query: 47 SNRLIYHLNDGRVQKAIFT-----LDLMTQKGNHPDLDT--YSLLLKSCIRSRNFHLGKL 99
+ RL+ N R+++ F+ LDL + P LD+ Y +L+ CI+ + K
Sbjct: 13 TRRLMIRCN--RIRQCGFSVKTAALDLESSDSIIPGLDSHAYGAMLRRCIQKNDPISAKA 70
Query: 100 VHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRG 159
+H + + + N L++ Y K G +A +F M +R+ VS+ ++ Y +
Sbjct: 71 IHCDILKKGSCLDLFATNILLNAYVKAGFDKDALNLFDEM-PERNNVSFVTLAQGYACQ- 128
Query: 160 KQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVG 219
D I ++ + G N + F++ ++ + + I ++ ++K GY DS+ VG
Sbjct: 129 ---DPIGLYSRLHREGHELNPHVFTSFLKLFVSLDKAEICPWLHSPIVKLGY-DSNAFVG 184
Query: 220 CALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG 278
ALI+ + V GSVD SA VF+ + K+ V W +++ + G D+++L M ++G
Sbjct: 185 AALINAYSVCGSVD--SARTVFEGILCKDIVVWAGIVSCYVENGYFEDSLKLLSCMRMAG 242
Query: 279 FLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVD 338
F+P+ +T + A L F K +H ++T LD VG L+ +Y + G +
Sbjct: 243 FMPNNYTFDTALKASIGLGAFDFAKGVHGQILKTCYVLDPRVGVGLLQLYTQL---GDMS 299
Query: 339 DSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC 398
D+ KVF+ M ++V+ W+ +I + Q+G + EAV LF M + V PN FT +S+L C
Sbjct: 300 DAFKVFNEMPKNDVVPWSFMIARFCQNGFCN-EAVDLFIRMREAFVVPNEFTLSSILNGC 358
Query: 399 GNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYN 458
S + EQ++ VK G LD V N+LI +YA+ +M+ A K F L KN VS+N
Sbjct: 359 AIGKCSGLGEQLHGLVVKVGFDLDIYVSNALIDVYAKCEKMDTAVKLFAELSSKNEVSWN 418
Query: 459 TMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS 518
T++ Y KAF + E V + TF+S L +S+ ++ G Q+H IK+
Sbjct: 419 TVIVGYENLGEGGKAFSMFREALRNQVSVTEVTFSSALGACASLASMDLGVQVHGLAIKT 478
Query: 519 GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF 578
+ N+LI MY++C +++ A VF EME +V SW ++I+G++ HG +AL I
Sbjct: 479 NNAKKVAVSNSLIDMYAKCGDIKFAQSVFNEMETIDVASWNALISGYSTHGLGRQALRIL 538
Query: 579 YKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGR 638
M KPNG+T++ VLS CS+AGLI +G + F SM +HGI +EHY CMV LLGR
Sbjct: 539 DIMKDRDCKPNGLTFLGVLSGCSNAGLIDQGQECFESMIRDHGIEPCLEHYTCMVRLLGR 598
Query: 639 SGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILL 698
SG L +A++ I +P V++WR L A + E + +AE IL+ +P+D A ++L+
Sbjct: 599 SGQLDKAMKLIEGIPYEPSVMIWRAMLSASMNQNNEEFARRSAEEILKINPKDEATYVLV 658
Query: 699 SNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAEL 758
SN+YA A W VA+IRK MKE + KE G SWIE VH F VG + HP I L
Sbjct: 659 SNMYAGAKQWANVASIRKSMKEMGVKKEPGLSWIEHQGDVHYFSVGLSDHPDMKLINGML 718
Query: 759 DQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP-IRVFKN 817
+ L +K GY+PD N VL ++++E+K + L+ HSE++A+A+GL+ S+ I + KN
Sbjct: 719 EWLNMKATRAGYVPDRNAVLLDMDDEEKDKRLWVHSERLALAYGLVRMPSSRNRILIMKN 778
Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
LR+C DCH+A+K IS + R++V+RD NRFHH G CSC D+W
Sbjct: 779 LRICSDCHSAMKVISSIVQRDLVIRDMNRFHHFHAGVCSCGDHW 822
>sp|Q9SY02|PP301_ARATH Pentatricopeptide repeat-containing protein At4g02750
OS=Arabidopsis thaliana GN=PCMP-H24 PE=3 SV=1
Length = 781
Score = 494 bits (1272), Expect = e-138, Method: Compositional matrix adjust.
Identities = 277/778 (35%), Positives = 455/778 (58%), Gaps = 41/778 (5%)
Query: 93 NFH-LGKLVHSLLTRSKLEP-----NSVI--LNSLISLYSKCGDLNEANKIFKSMGNKRD 144
NFH L + + + +S+ +P +S I N IS Y + G NEA ++FK M +
Sbjct: 36 NFHSLKRATQTQIQKSQTKPLLKCGDSDIKEWNVAISSYMRTGRCNEALRVFKRM-PRWS 94
Query: 145 IVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYG 204
VS++ MIS Y+ G+ A +F EM E ++ +I+ N+ ++
Sbjct: 95 SVSYNGMISGYLRNGEFELARKLFDEMPERDLVS----WNVMIKGYVRNRNLGKARELFE 150
Query: 205 FLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
+ + DVC ++ + + G VD A VFD+M EKN V W +++ Q
Sbjct: 151 IMP-----ERDVCSWNTMLSGYAQNGCVD--DARSVFDRMPEKNDVSWNALLSAYVQNSK 203
Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
+A LF + L G V + ++ + + S +R DV +
Sbjct: 204 MEEACMLFKSRENWALVSWNCLLGGFVK---KKKIVEARQFFDSMNVR-----DVVSWNT 255
Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
++ YA+ G +D++R++FD +V +WTA+++GY+Q+ + EA +LF M +
Sbjct: 256 IITGYAQ---SGKIDEARQLFDESPVQDVFTWTAMVSGYIQNRMVE-EARELFDKMPE-- 309
Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
N ++ ++L +A++++ R + N++I+ YA+ G++ +A+
Sbjct: 310 --RNEVSWNAMLAGYVQGERMEMAKELFDVMPCRNVS----TWNTMITGYAQCGKISEAK 363
Query: 444 KAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIG 503
F+ + +++ VS+ M+ Y+++ +S +A L ++E G + +F+S LS + +
Sbjct: 364 NLFDKMPKRDPVSWAAMIAGYSQSGHSFEALRLFVQMEREGGRLNRSSFSSALSTCADVV 423
Query: 504 AIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMIT 563
A+ G+Q+H R++K G+E+ + NAL+ MY +C ++E A +FKEM ++++SW +MI
Sbjct: 424 ALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGSIEEANDLFKEMAGKDIVSWNTMIA 483
Query: 564 GFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIV 623
G+++HGF AL F M +G+KP+ T +AVLSACSH GL+ +G ++F +M ++G++
Sbjct: 484 GYSRHGFGEVALRFFESMKREGLKPDDATMVAVLSACSHTGLVDKGRQYFYTMTQDYGVM 543
Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
+HYACMVDLLGR+G L +A +++MP D +W T LGA RVHG+TEL + AA+
Sbjct: 544 PNSQHYACMVDLLGRAGLLEDAHNLMKNMPFEPDAAIWGTLLGASRVHGNTELAETAADK 603
Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
I +P++ ++LLSNLYAS+G W V +R RM+++ + K G SWIE NK H F V
Sbjct: 604 IFAMEPENSGMYVLLSNLYASSGRWGDVGKLRVRMRDKGVKKVPGYSWIEIQNKTHTFSV 663
Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGL 803
G+ HP+ EI+A L++L L++K+ GY+ T+ VLH++EEE+K + + HSE++AVA+G+
Sbjct: 664 GDEFHPEKDEIFAFLEELDLRMKKAGYVSKTSVVLHDVEEEEKERMVRYHSERLAVAYGI 723
Query: 804 ISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
+ S +PIRV KNLRVC DCH AIKY++ +TGR I+LRD+NRFHH KDG CSC DYW
Sbjct: 724 MRVSSGRPIRVIKNLRVCEDCHNAIKYMARITGRLIILRDNNRFHHFKDGSCSCGDYW 781
Score = 83.2 bits (204), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 89/189 (47%), Gaps = 5/189 (2%)
Query: 69 MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
M ++G + ++S L +C LGK +H L + E + N+L+ +Y KCG
Sbjct: 400 MEREGGRLNRSSFSSALSTCADVVALELGKQLHGRLVKGGYETGCFVGNALLLMYCKCGS 459
Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
+ EAN +FK M K DIVSW++MI+ Y G A+ F M G P++ AV+
Sbjct: 460 IEEANDLFKEMAGK-DIVSWNTMIAGYSRHGFGEVALRFFESMKREGLKPDDATMVAVLS 518
Query: 189 ACSNTENVAIG-HIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EK 246
ACS+T V G Y G + C ++D+ + + LE A+ + M E
Sbjct: 519 ACSHTGLVDKGRQYFYTMTQDYGVMPNSQHYAC-MVDLLGRAGL-LEDAHNLMKNMPFEP 576
Query: 247 NTVGWTLMI 255
+ W ++
Sbjct: 577 DAAIWGTLL 585
>sp|Q9LIQ7|PP252_ARATH Pentatricopeptide repeat-containing protein At3g24000,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H87 PE=2
SV=1
Length = 633
Score = 493 bits (1268), Expect = e-138, Method: Compositional matrix adjust.
Identities = 237/584 (40%), Positives = 370/584 (63%), Gaps = 6/584 (1%)
Query: 279 FLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
++P DR + ++ C+ +L G+ +H+ +++ D+ +G +L++MYAKC GS+
Sbjct: 55 YIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC---GSL 111
Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
+++RKVF++M + ++WT +I+GY Q R +A+ F+ M++ +PN FT +SV+KA
Sbjct: 112 EEARKVFEKMPQRDFVTWTTLISGYSQHD-RPCDALLFFNQMLRFGYSPNEFTLSSVIKA 170
Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
Q++ VK G + VG++L+ +Y R G M+DA+ F++L +N VS+
Sbjct: 171 AAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDVSW 230
Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
N ++ +A+ +EKA EL + G S +++ASL SS G + +G+ +HA +IK
Sbjct: 231 NALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIK 290
Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
SG + N L+ MY++ ++ A ++F + R+V+SW S++T +A+HGF A+
Sbjct: 291 SGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGFGKEAVWW 350
Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
F +M GI+PN I++++VL+ACSH+GL+ EGW H+ + + GIV HY +VDLLG
Sbjct: 351 FEEMRRVGIRPNEISFLSVLTACSHSGLLDEGW-HYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
R+G L AL FI MP+ +W+ L ACR+H +TELG +AAE + E DP DP H++
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDDPGPHVI 469
Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAE 757
L N+YAS G W A +RK+MKE + KE CSW+E +N +H F + HP+ EI +
Sbjct: 470 LYNIYASGGRWNDAARVRKKMKESGVKKEPACSWVEIENAIHMFVANDERHPQREEIARK 529
Query: 758 LDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKN 817
+++ KIKE GY+PDT+ V+ ++++++ L HSEKIA+AF L++T I + KN
Sbjct: 530 WEEVLAKIKELGYVPDTSHVIVHVDQQEREVNLQYHSEKIALAFALLNTPPGSTIHIKKN 589
Query: 818 LRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
+RVCGDCHTAIK S V GREI++RD+NRFHH KDG CSC DYW
Sbjct: 590 IRVCGDCHTAIKLASKVVGREIIVRDTNRFHHFKDGNCSCKDYW 633
Score = 232 bits (592), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 134/398 (33%), Positives = 219/398 (55%), Gaps = 12/398 (3%)
Query: 77 DLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIF 136
D Y+ LLK C + G++VH+ + +S + V+ N+L+++Y+KCG L EA K+F
Sbjct: 59 DRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKCGSLEEARKVF 118
Query: 137 KSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENV 196
+ M +RD V+W+++IS Y + DA+ F +ML G+ PNE+ S+VI+A +
Sbjct: 119 EKMP-QRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVIKAAAAERRG 177
Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
GH ++GF +KCG FDS+V VG AL+D++ + + ++ A VFD + +N V W +I
Sbjct: 178 CCGHQLHGFCVKCG-FDSNVHVGSALLDLYTRYGL-MDDAQLVFDALESRNDVSWNALIA 235
Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
+ A+ LF M+ GF P F+ + + ACS GK +H++ I++G L
Sbjct: 236 GHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKL 295
Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
G +L+DMYAK GS+ D+RK+FDR+ +V+SW +++T Y Q G KEAV F
Sbjct: 296 VAFAGNTLLDMYAK---SGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF-GKEAVWWF 351
Query: 377 SDMIQGQVAPNHFTFASVLKACGN--LLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
+M + + PN +F SVL AC + LLD Y K G + +++ +
Sbjct: 352 EEMRRVGIRPNEISFLSVLTACSHSGLLDE--GWHYYELMKKDGIVPEAWHYVTVVDLLG 409
Query: 435 RSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSE 471
R+G + A + E + E + +++A + N+E
Sbjct: 410 RAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTE 447
Score = 206 bits (525), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 127/428 (29%), Positives = 230/428 (53%), Gaps = 13/428 (3%)
Query: 172 LELGFCPNEYCF-SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-G 229
LE + P + F + +++ C+ + + G I++ +L+ F D+ +G L++M+ K G
Sbjct: 51 LEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQ-SIFRHDIVMGNTLLNMYAKCG 109
Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
S LE A KVF+KM +++ V WT +I+ +Q P DA+ F M+ G+ P+ FTLS V
Sbjct: 110 S--LEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSV 167
Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
+ A + G QLH + ++ G +V VG +L+D+Y + G +DD++ VFD +
Sbjct: 168 IKAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRY---GLMDDAQLVFDALES 224
Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
N +SW A+I G+ + G +K A++LF M++ P+HF++AS+ AC + +
Sbjct: 225 RNDVSWNALIAGHARRSGTEK-ALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKW 283
Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
V+ + +K G L GN+L+ MYA+SG + DARK F+ L ++++VS+N+++ AYA++
Sbjct: 284 VHAYMIKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVVSWNSLLTAYAQHGF 343
Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
++A E+ G+ + +F S+L+ S G + +G + + K G Y
Sbjct: 344 GKEAVWWFEEMRRVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIVPEAWHYVT 403
Query: 530 LISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHG---FAARALEIFYKMLADG 585
++ + R ++ A + +EM + W +++ H A A E +++ D
Sbjct: 404 VVDLLGRAGDLNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELGAYAAEHVFELDPDD 463
Query: 586 IKPNGITY 593
P+ I Y
Sbjct: 464 PGPHVILY 471
Score = 89.7 bits (221), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 9/216 (4%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
H +KA+ M + G P +Y+ L +C + GK VH+ + +S +
Sbjct: 237 HARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYMIKSGEKLV 296
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
+ N+L+ +Y+K G +++A KIF + KRD+VSW+S++++Y G +A+ F EM
Sbjct: 297 AFAGNTLLDMYAKSGSIHDARKIFDRLA-KRDVVSWNSLLTAYAQHGFGKEAVWWFEEMR 355
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
+G PNE F +V+ ACS++ + G Y + K G + ++D+ + D
Sbjct: 356 RVGIRPNEISFLSVLTACSHSGLLDEGWHYYELMKKDGIV-PEAWHYVTVVDLLGRAG-D 413
Query: 233 LESAYKVFDKMTEKNTVG-WTLMITRC-----TQLG 262
L A + ++M + T W ++ C T+LG
Sbjct: 414 LNRALRFIEEMPIEPTAAIWKALLNACRMHKNTELG 449
Score = 77.4 bits (189), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/281 (23%), Positives = 125/281 (44%), Gaps = 34/281 (12%)
Query: 478 HEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRC 537
+++E + + + +LL + + +G +HA I++S F + + N L++MY++C
Sbjct: 49 NDLEGSYIPADRRFYNTLLKKCTVFKLLIQGRIVHAHILQSIFRHDIVMGNTLLNMYAKC 108
Query: 538 ANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
++E A +VF++M R+ ++WT++I+G+++H AL F +ML G PN T +V+
Sbjct: 109 GSLEEARKVFEKMPQRDFVTWTTLISGYSQHDRPCDALLFFNQMLRFGYSPNEFTLSSVI 168
Query: 598 SACS-----------HAGLISEGWK---HFRS----MYDEHGIVQRME------------ 627
A + H + G+ H S +Y +G++ +
Sbjct: 169 KAAAAERRGCCGHQLHGFCVKCGFDSNVHVGSALLDLYTRYGLMDDAQLVFDALESRNDV 228
Query: 628 HYACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHGDTELGKHA-AEM 683
+ ++ R +ALE + M + + GAC G E GK A M
Sbjct: 229 SWNALIAGHARRSGTEKALELFQGMLRDGFRPSHFSYASLFGACSSTGFLEQGKWVHAYM 288
Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLI 724
I + A L ++YA +G I R+ +R+++
Sbjct: 289 IKSGEKLVAFAGNTLLDMYAKSGSIHDARKIFDRLAKRDVV 329
>sp|O82380|PP175_ARATH Pentatricopeptide repeat-containing protein At2g29760,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H33 PE=2
SV=1
Length = 738
Score = 489 bits (1259), Expect = e-137, Method: Compositional matrix adjust.
Identities = 263/694 (37%), Positives = 398/694 (57%), Gaps = 40/694 (5%)
Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGS-VDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
+G +++ G F SD L M S LE A KVFD++ + N+ W +I
Sbjct: 50 HGHMIRTGTF-SDPYSASKLFAMAALSSFASLEYARKVFDEIPKPNSFAWNTLIRAYASG 108
Query: 262 GCPRDAIRLFLDMIL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
P +I FLDM+ S P+++T ++ A +E+ + G+ LH A+++ + DV V
Sbjct: 109 PDPVLSIWAFLDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFV 168
Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
SL+ Y C G +D + KVF + + +V+SW ++I G+VQ G DK A++LF M
Sbjct: 169 ANSLIHCYFSC---GDLDSACKVFTTIKEKDVVSWNSMINGFVQKGSPDK-ALELFKKME 224
Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
V +H T VL AC + + QV ++ + ++ + N+++ MY + G +E
Sbjct: 225 SEDVKASHVTMVGVLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIE 284
Query: 441 DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT-----SAY----- 490
DA++ F+++ EK+ V++ TM+D YA + + E A E+L+ + + SAY
Sbjct: 285 DAKRLFDAMEEKDNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGK 344
Query: 491 ----------------------TFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
T S LS + +GA+ G IH+ I K G N + +
Sbjct: 345 PNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTS 404
Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
ALI MYS+C ++E + +VF +E R+V W++MI G A HG A+++FYKM +KP
Sbjct: 405 ALIHMYSKCGDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKP 464
Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
NG+T+ V ACSH GL+ E F M +GIV +HYAC+VD+LGRSG L +A++F
Sbjct: 465 NGVTFTNVFCACSHTGLVDEAESLFHQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKF 524
Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
I +MP+ VW LGAC++H + L + A +LE +P++ AH+LLSN+YA G W
Sbjct: 525 IEAMPIPPSTSVWGALLGACKIHANLNLAEMACTRLLELEPRNDGAHVLLSNIYAKLGKW 584
Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
E V+ +RK M+ L KE GCS IE D +H+F G+ +HP + ++Y +L ++ K+K
Sbjct: 585 ENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEFLSGDNAHPMSEKVYGKLHEVMEKLKSN 644
Query: 769 GYLPDTNFVLHELEEEQ-KVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTA 827
GY P+ + VL +EEE+ K Q L HSEK+A+ +GLIST K IRV KNLRVCGDCH+
Sbjct: 645 GYEPEISQVLQIIEEEEMKEQSLNLHSEKLAICYGLISTEAPKVIRVIKNLRVCGDCHSV 704
Query: 828 IKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
K IS + REI++RD RFHH ++G+CSCND+W
Sbjct: 705 AKLISQLYDREIIVRDRYRFHHFRNGQCSCNDFW 738
Score = 167 bits (422), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 111/417 (26%), Positives = 211/417 (50%), Gaps = 40/417 (9%)
Query: 66 LDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK 125
LD++++ +P+ T+ L+K+ + LG+ +H + +S + + + NSLI Y
Sbjct: 119 LDMVSESQCYPNKYTFPFLIKAAAEVSSLSLGQSLHGMAVKSAVGSDVFVANSLIHCYFS 178
Query: 126 CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSA 185
CGDL+ A K+F ++ K D+VSW+SMI+ +V +G A+ +F +M +
Sbjct: 179 CGDLDSACKVFTTIKEK-DVVSWNSMINGFVQKGSPDKALELFKKMESEDVKASHVTMVG 237
Query: 186 VIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSV------------- 231
V+ AC+ N+ G + ++ + + ++ + A++DM+ K GS+
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEE-NRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEK 296
Query: 232 ----------------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
D E+A +V + M +K+ V W +I+ Q G P +A+ +F ++
Sbjct: 297 DNVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQ 356
Query: 276 LSGFLP-DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD 334
L + ++ TL +SAC+++ G+ +HS+ + G+ ++ V +L+ MY+KC
Sbjct: 357 LQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFHVTSALIHMYSKC--- 413
Query: 335 GSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASV 394
G ++ SR+VF+ + +V W+A+I G G + EAV +F M + V PN TF +V
Sbjct: 414 GDLEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGN-EAVDMFYKMQEANVKPNGVTFTNV 472
Query: 395 LKACGNLLDSNVAEQVYTHAVKR--GRALDDCVGNSLISMYARSGRMEDARKAFESL 449
AC + + AE ++ H ++ G ++ ++ + RSG +E A K E++
Sbjct: 473 FCACSHTGLVDEAESLF-HQMESNYGIVPEEKHYACIVDVLGRSGYLEKAVKFIEAM 528
Score = 103 bits (256), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 100/441 (22%), Positives = 188/441 (42%), Gaps = 85/441 (19%)
Query: 84 LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK- 142
+L +C + RN G+ V S + +++ N + N+++ +Y+KCG + +A ++F +M K
Sbjct: 238 VLSACAKIRNLEFGRQVCSYIEENRVNVNLTLANAMLDMYTKCGSIEDAKRLFDAMEEKD 297
Query: 143 -----------------------------RDIVSWSSMISSYVNRGKQVDAIHMFVEM-L 172
+DIV+W+++IS+Y GK +A+ +F E+ L
Sbjct: 298 NVTWTTMLDGYAISEDYEAAREVLNSMPQKDIVAWNALISAYEQNGKPNEALIVFHELQL 357
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
+ N+ + + AC+ + +G I+ ++ K G + V ALI M+ K D
Sbjct: 358 QKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHG-IRMNFHVTSALIHMYSKCG-D 415
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
LE + +VF+ + +++ W+ MI GC +A+ +F M + P+ T + V A
Sbjct: 416 LEKSREVFNSVEKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEANVKPNGVTFTNVFCA 475
Query: 293 CSELELFTSGKQL-HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
CS L + L H G+ + + + C VD V R
Sbjct: 476 CSHTGLVDEAESLFHQMESNYGIVPE--------EKHYACIVD--------VLGR----- 514
Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
+GY++ +AVK M + P+ + ++L AC + N+AE
Sbjct: 515 --------SGYLE------KAVKFIEAM---PIPPSTSVWGALLGACKIHANLNLAEMAC 557
Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNL--------VSYNTMVDA 463
T ++ +D L ++YA+ G+ E+ + + + L + + M+
Sbjct: 558 TRLLEL-EPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHE 616
Query: 464 YAKNLN----SEKAFELLHEI 480
+ N SEK + LHE+
Sbjct: 617 FLSGDNAHPMSEKVYGKLHEV 637
Score = 78.2 bits (191), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 74/139 (53%), Gaps = 2/139 (1%)
Query: 56 DGRVQKAIFTL-DLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
+G+ +A+ +L QK + T L +C + LG+ +HS + + + N
Sbjct: 342 NGKPNEALIVFHELQLQKNMKLNQITLVSTLSACAQVGALELGRWIHSYIKKHGIRMNFH 401
Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
+ ++LI +YSKCGDL ++ ++F S+ KRD+ WS+MI G +A+ MF +M E
Sbjct: 402 VTSALIHMYSKCGDLEKSREVFNSV-EKRDVFVWSAMIGGLAMHGCGNEAVDMFYKMQEA 460
Query: 175 GFCPNEYCFSAVIRACSNT 193
PN F+ V ACS+T
Sbjct: 461 NVKPNGVTFTNVFCACSHT 479
>sp|Q9S7F4|PP206_ARATH Putative pentatricopeptide repeat-containing protein At2g01510
OS=Arabidopsis thaliana GN=PCMP-H36 PE=3 SV=1
Length = 825
Score = 489 bits (1258), Expect = e-137, Method: Compositional matrix adjust.
Identities = 261/756 (34%), Positives = 443/756 (58%), Gaps = 14/756 (1%)
Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
N+V N++IS + K GD++ A +F +M + R +V+W+ ++ Y +A +F +M
Sbjct: 78 NTVSTNTMISGHVKTGDVSSARDLFDAMPD-RTVVTWTILMGWYARNSHFDEAFKLFRQM 136
Query: 172 LELGFC--PNEYCFSAVIRACSN-TENVAIGHIIYGFLLKCGYFDSD--VCVGCALIDMF 226
C P+ F+ ++ C++ A+G + + F +K G FD++ + V L+ +
Sbjct: 137 CRSSSCTLPDHVTFTTLLPGCNDAVPQNAVGQV-HAFAVKLG-FDTNPFLTVSNVLLKSY 194
Query: 227 VKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
+ L+ A +F+++ EK++V + +IT + G ++I LFL M SG P FT
Sbjct: 195 CEVR-RLDLACVLFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTF 253
Query: 287 SGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
SGV+ A L F G+QLH+ ++ TG + D VG ++D Y+K V ++R +FD
Sbjct: 254 SGVLKAVVGLHDFALGQQLHALSVTTGFSRDASVGNQILDFYSK---HDRVLETRMLFDE 310
Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
M + + +S+ +I+ Y Q+ + + ++ F +M +F FA++L NL +
Sbjct: 311 MPELDFVSYNVVISSYSQAD-QYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQM 369
Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
Q++ A+ VGNSL+ MYA+ E+A F+SL ++ VS+ ++ Y +
Sbjct: 370 GRQLHCQALLATADSILHVGNSLVDMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQ 429
Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
+L ++ + + TFA++L ++S ++ G+Q+HA II+SG N
Sbjct: 430 KGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVFS 489
Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGI 586
+ L+ MY++C +++ A QVF+EM DRN +SW ++I+ A +G A+ F KM+ G+
Sbjct: 490 GSGLVDMYAKCGSIKDAVQVFEEMPDRNAVSWNALISAHADNGDGEAAIGAFAKMIESGL 549
Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEAL 646
+P+ ++ + VL+ACSH G + +G ++F++M +GI + +HYACM+DLLGR+G EA
Sbjct: 550 QPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAE 609
Query: 647 EFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDP-QDPAAHILLSNLYASA 705
+ + MP D ++W + L ACR+H + L + AAE + + +D AA++ +SN+YA+A
Sbjct: 610 KLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLFSMEKLRDAAAYVSMSNIYAAA 669
Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
G WE V +++K M+ER + K SW+E ++K+H F + +HP EI ++++L +I
Sbjct: 670 GEWEKVRDVKKAMRERGIKKVPAYSWVEVNHKIHVFSSNDQTHPNGDEIVRKINELTAEI 729
Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
+ GY PDT+ V+ +++E+ K++ L HSE++AVAF LIST + PI V KNLR C DCH
Sbjct: 730 EREGYKPDTSSVVQDVDEQMKIESLKYHSERLAVAFALISTPEGCPIVVMKNLRACRDCH 789
Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
AIK IS + REI +RD++RFHH +G CSC DYW
Sbjct: 790 AAIKLISKIVKREITVRDTSRFHHFSEGVCSCGDYW 825
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 136/526 (25%), Positives = 256/526 (48%), Gaps = 41/526 (7%)
Query: 206 LLKCGYFDSDVCVGCALI-DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG-- 262
++K G FD+D C ++ D+ +G V +A KV+D+M KNTV MI+ + G
Sbjct: 39 IIKTG-FDTDTCRSNFIVEDLLRRGQV--SAARKVYDEMPHKNTVSTNTMISGHVKTGDV 95
Query: 263 -CPRD----------------------------AIRLFLDMILSG--FLPDRFTLSGVVS 291
RD A +LF M S LPD T + ++
Sbjct: 96 SSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLPDHVTFTTLLP 155
Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
C++ + Q+H++A++ G + + S V + + C V +D + +F+ + + +
Sbjct: 156 GCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVR-RLDLACVLFEEIPEKD 214
Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
+++ +ITGY + G E++ LF M Q P+ FTF+ VLKA L D + +Q++
Sbjct: 215 SVTFNTLITGY-EKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLH 273
Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
+V G + D VGN ++ Y++ R+ + R F+ + E + VSYN ++ +Y++ E
Sbjct: 274 ALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISSYSQADQYE 333
Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
+ E++ G + FA++LS A+++ ++ G Q+H + + + +S + N+L+
Sbjct: 334 ASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSILHVGNSLV 393
Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
MY++C E A +FK + R +SWT++I+G+ + G L++F KM ++ +
Sbjct: 394 DMYAKCEMFEEAELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQS 453
Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
T+ VL A + + G K + G ++ + + +VD+ + GS+ +A++
Sbjct: 454 TFATVLKASASFASLLLG-KQLHAFIIRSGNLENVFSGSGLVDMYAKCGSIKDAVQVFEE 512
Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
MP + + W + A +GD E A ++E Q + IL
Sbjct: 513 MP-DRNAVSWNALISAHADNGDGEAAIGAFAKMIESGLQPDSVSIL 557
Score = 171 bits (433), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 124/438 (28%), Positives = 222/438 (50%), Gaps = 26/438 (5%)
Query: 56 DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
DG ++I M Q G+ P T+S +LK+ + +F LG+ +H+L + ++ +
Sbjct: 228 DGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHDFALGQQLHALSVTTGFSRDASV 287
Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
N ++ YSK + E +F M + D VS++ +ISSY + ++H F EM +G
Sbjct: 288 GNQILDFYSKHDRVLETRMLFDEMP-ELDFVSYNVVISSYSQADQYEASLHFFREMQCMG 346
Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLES 235
F + F+ ++ +N ++ +G ++ L DS + VG +L+DM+ K + E
Sbjct: 347 FDRRNFPFATMLSIAANLSSLQMGRQLHCQAL-LATADSILHVGNSLVDMYAKCEM-FEE 404
Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
A +F + ++ TV WT +I+ Q G ++LF M S D+ T + V+ A +
Sbjct: 405 AELIFKSLPQRTTVSWTALISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASAS 464
Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
GKQLH++ IR+G +V G LVDMYAKC GS+ D+ +VF+ M D N +SW
Sbjct: 465 FASLLLGKQLHAFIIRSGNLENVFSGSGLVDMYAKC---GSIKDAVQVFEEMPDRNAVSW 521
Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
A+I+ + +G + A+ F+ MI+ + P+ + VL AC + EQ
Sbjct: 522 NALISAHADNGD-GEAAIGAFAKMIESGLQPDSVSILGVLTACSH---CGFVEQ----GT 573
Query: 416 KRGRALDDCVGNS--------LISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
+ +A+ G + ++ + R+GR +A K + + FE + + ++++++A
Sbjct: 574 EYFQAMSPIYGITPKKKHYACMLDLLGRNGRFAEAEKLMDEMPFEPDEIMWSSVLNACRI 633
Query: 467 NLN---SEKAFELLHEIE 481
+ N +E+A E L +E
Sbjct: 634 HKNQSLAERAAEKLFSME 651
Score = 116 bits (291), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 116/514 (22%), Positives = 213/514 (41%), Gaps = 58/514 (11%)
Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAI 358
F +++ + I+TG D C +V+ + G V +RKV+D M N +S +
Sbjct: 29 FLDTRRVDARIIKTGFDTDTCRSNFIVEDLLR---RGQVSAARKVYDEMPHKNTVSTNTM 85
Query: 359 ITGYVQSG----GRD--------------------------KEAVKLFSDMIQGQ--VAP 386
I+G+V++G RD EA KLF M + P
Sbjct: 86 ISGHVKTGDVSSARDLFDAMPDRTVVTWTILMGWYARNSHFDEAFKLFRQMCRSSSCTLP 145
Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD--CVGNSLISMYARSGRMEDARK 444
+H TF ++L C + + N QV+ AVK G + V N L+ Y R++ A
Sbjct: 146 DHVTFTTLLPGCNDAVPQNAVGQVHAFAVKLGFDTNPFLTVSNVLLKSYCEVRRLDLACV 205
Query: 445 AFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGA 504
FE + EK+ V++NT++ Y K+ ++ L ++ +G S +TF+ +L +
Sbjct: 206 LFEEIPEKDSVTFNTLITGYEKDGLYTESIHLFLKMRQSGHQPSDFTFSGVLKAVVGLHD 265
Query: 505 IGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITG 564
G+Q+HA + +GF + + N ++ YS+ V +F EM + + +S+ +I+
Sbjct: 266 FALGQQLHALSVTTGFSRDASVGNQILDFYSKHDRVLETRMLFDEMPELDFVSYNVVISS 325
Query: 565 FAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWK-HFRSMYDEHGIV 623
+++ +L F +M G + +LS ++ + G + H +++ +
Sbjct: 326 YSQADQYEASLHFFREMQCMGFDRRNFPFATMLSIAANLSSLQMGRQLHCQALLATADSI 385
Query: 624 QRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEM 683
+ + +VD+ + EA +S+P V W + G + G H A +
Sbjct: 386 LHVGN--SLVDMYAKCEMFEEAELIFKSLPQRTTV-SWTAL-----ISGYVQKGLHGAGL 437
Query: 684 ILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHV 743
L + SNL A + V L K+ I + N + F
Sbjct: 438 KL-------FTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSGNLENVF-- 488
Query: 744 GETSHPKTLEIYAELDQLALKIKEFGYLPDTNFV 777
S +++YA+ + ++ F +PD N V
Sbjct: 489 ---SGSGLVDMYAKCGSIKDAVQVFEEMPDRNAV 519
Score = 76.3 bits (186), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 114/235 (48%), Gaps = 26/235 (11%)
Query: 54 LNDGRVQKAIFT--LDLMTQ-KGNH--PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
L G VQK + L L T+ +G++ D T++ +LK+ + LGK +H+ + RS
Sbjct: 423 LISGYVQKGLHGAGLKLFTKMRGSNLRADQSTFATVLKASASFASLLLGKQLHAFIIRSG 482
Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
N + L+ +Y+KCG + +A ++F+ M + R+ VSW+++IS++ + G AI F
Sbjct: 483 NLENVFSGSGLVDMYAKCGSIKDAVQVFEEMPD-RNAVSWNALISAHADNGDGEAAIGAF 541
Query: 169 VEMLELGFCPNEYCFSAVIRACSN-------TENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
+M+E G P+ V+ ACS+ TE IYG K ++
Sbjct: 542 AKMIESGLQPDSVSILGVLTACSHCGFVEQGTEYFQAMSPIYGITPKKKHY-------AC 594
Query: 222 LIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC----TQLGCPRDAIRLF 271
++D+ + A K+ D+M E + + W+ ++ C Q R A +LF
Sbjct: 595 MLDLLGRNG-RFAEAEKLMDEMPFEPDEIMWSSVLNACRIHKNQSLAERAAEKLF 648
>sp|Q9LUJ2|PP249_ARATH Pentatricopeptide repeat-containing protein At3g22690
OS=Arabidopsis thaliana GN=PCMP-H56 PE=2 SV=1
Length = 842
Score = 485 bits (1248), Expect = e-136, Method: Compositional matrix adjust.
Identities = 269/800 (33%), Positives = 456/800 (57%), Gaps = 42/800 (5%)
Query: 98 KLVHSLLTRSKLEPNSVILNSLISLYSKCG---DLNEANKIFKSMGNKRDIVSWSSMISS 154
K+ H LT+ L+ + + L++ + G L+ A ++F++ + ++S+I
Sbjct: 49 KMFHRSLTKQGLDNDVSTITKLVARSCELGTRESLSFAKEVFENSESYGTCFMYNSLIRG 108
Query: 155 YVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
Y + G +AI +F+ M+ G P++Y F + AC+ + G I+G ++K GY
Sbjct: 109 YASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVKMGY-AK 167
Query: 215 DVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM 274
D+ V +L+ + + +L+SA KVFD+M+E+N V WT MI + +DA+ LF M
Sbjct: 168 DLFVQNSLVHFYAECG-ELDSARKVFDEMSERNVVSWTSMICGYARRDFAKDAVDLFFRM 226
Query: 275 IL-SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTV 333
+ P+ T+ V+SAC++LE +G++++++ +G+ ++ + +LVDMY KC
Sbjct: 227 VRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVSALVDMYMKCN- 285
Query: 334 DGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFAS 393
++D ++++FD N+ A+ + YV+ G +EA+ +F+ M+ V P+ + S
Sbjct: 286 --AIDVAKRLFDEYGASNLDLCNAMASNYVRQG-LTREALGVFNLMMDSGVRPDRISMLS 342
Query: 394 VLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR------------------ 435
+ +C L + + + + ++ G D + N+LI MY +
Sbjct: 343 AISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQDTAFRIFDRMSNKT 402
Query: 436 -------------SGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
+G ++ A + FE++ EKN+VS+NT++ + E+A E+ ++
Sbjct: 403 VVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEVFCSMQS 462
Query: 483 T-GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
GV T S+ S +GA+ + I+ I K+G + + + L+ M+SRC + E
Sbjct: 463 QEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFSRCGDPE 522
Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
+A +F + +R+V +WT+ I A G A RA+E+F M+ G+KP+G+ ++ L+ACS
Sbjct: 523 SAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVGALTACS 582
Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
H GL+ +G + F SM HG+ HY CMVDLLGR+G L EA++ I MP+ + ++W
Sbjct: 583 HGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPMEPNDVIW 642
Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
+ L ACRV G+ E+ +AAE I P+ +++LLSN+YASAG W +A +R MKE+
Sbjct: 643 NSLLAACRVQGNVEMAAYAAEKIQVLAPERTGSYVLLSNVYASAGRWNDMAKVRLSMKEK 702
Query: 722 NLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHEL 781
L K G S I+ K H+F G+ SHP+ I A LD+++ + G++PD + VL ++
Sbjct: 703 GLRKPPGTSSIQIRGKTHEFTSGDESHPEMPNIEAMLDEVSQRASHLGHVPDLSNVLMDV 762
Query: 782 EEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVL 841
+E++K+ L +HSEK+A+A+GLIS++K IR+ KNLRVC DCH+ K+ S V REI+L
Sbjct: 763 DEKEKIFMLSRHSEKLAMAYGLISSNKGTTIRIVKNLRVCSDCHSFAKFASKVYNREIIL 822
Query: 842 RDSNRFHHIKDGKCSCNDYW 861
RD+NRFH+I+ GKCSC D+W
Sbjct: 823 RDNNRFHYIRQGKCSCGDFW 842
Score = 230 bits (586), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 159/572 (27%), Positives = 278/572 (48%), Gaps = 47/572 (8%)
Query: 48 NRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
N LI + + G +AI M G PD T+ L +C +SR G +H L+ +
Sbjct: 103 NSLIRGYASSGLCNEAILLFLRMMNSGISPDKYTFPFGLSACAKSRAKGNGIQIHGLIVK 162
Query: 107 SKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIH 166
+ + NSL+ Y++CG+L+ A K+F M ++R++VSW+SMI Y R DA+
Sbjct: 163 MGYAKDLFVQNSLVHFYAECGELDSARKVFDEM-SERNVVSWTSMICGYARRDFAKDAVD 221
Query: 167 MFVEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
+F M+ + PN VI AC+ E++ G +Y F+ G +D+ V AL+DM
Sbjct: 222 LFFRMVRDEEVTPNSVTMVCVISACAKLEDLETGEKVYAFIRNSGIEVNDLMVS-ALVDM 280
Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
++K + ++ A ++FD+ N M + + G R+A+ +F M+ SG PDR +
Sbjct: 281 YMKCNA-IDVAKRLFDEYGASNLDLCNAMASNYVRQGLTREALGVFNLMMDSGVRPDRIS 339
Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
+ +S+CS+L GK H + +R G + +L+DMY KC D + ++FD
Sbjct: 340 MLSAISSCSQLRNILWGKSCHGYVLRNGFESWDNICNALIDMYMKCHRQ---DTAFRIFD 396
Query: 346 RMLDHNVMSWTAIITGYVQSGGRD------------------------------KEAVKL 375
RM + V++W +I+ GYV++G D +EA+++
Sbjct: 397 RMSNKTVVTWNSIVAGYVENGEVDAAWETFETMPEKNIVSWNTIISGLVQGSLFEEAIEV 456
Query: 376 FSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA 434
F M Q V + T S+ ACG+L ++A+ +Y + K G LD +G +L+ M++
Sbjct: 457 FCSMQSQEGVNADGVTMMSIASACGHLGALDLAKWIYYYIEKNGIQLDVRLGTTLVDMFS 516
Query: 435 RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
R G E A F SL +++ ++ + A A N+E+A EL ++ + G+ F
Sbjct: 517 RCGDPESAMSIFNSLTNRDVSAWTAAIGAMAMAGNAERAIELFDDMIEQGLKPDGVAFVG 576
Query: 495 LLSGASSIGAIGKGEQIHARIIK-SGFESNHCIYNALISMYSRCANVEAAFQVFKEME-D 552
L+ S G + +G++I ++K G Y ++ + R +E A Q+ ++M +
Sbjct: 577 ALTACSHGGLVQQGKEIFYSMLKLHGVSPEDVHYGCMVDLLGRAGLLEEAVQLIEDMPME 636
Query: 553 RNVISWTSMITGFAKHG------FAARALEIF 578
N + W S++ G +AA +++
Sbjct: 637 PNDVIWNSLLAACRVQGNVEMAAYAAEKIQVL 668
>sp|P0C898|PP232_ARATH Putative pentatricopeptide repeat-containing protein At3g15130
OS=Arabidopsis thaliana GN=PCMP-H86 PE=3 SV=1
Length = 689
Score = 483 bits (1244), Expect = e-135, Method: Compositional matrix adjust.
Identities = 259/687 (37%), Positives = 406/687 (59%), Gaps = 18/687 (2%)
Query: 185 AVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT 244
+++R C+ G ++ +LLK G ++ LIDM+ K L AYKVFD M
Sbjct: 11 SILRVCTRKGLSDQGGQVHCYLLKSGS-GLNLITSNYLIDMYCKCREPL-MAYKVFDSMP 68
Query: 245 EKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
E+N V W+ +++ G + ++ LF +M G P+ FT S + AC L G Q
Sbjct: 69 ERNVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQ 128
Query: 305 LHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQ 364
+H + ++ G + V VG SLVDMY+KC G ++++ KVF R++D +++SW A+I G+V
Sbjct: 129 IHGFCLKIGFEMMVEVGNSLVDMYSKC---GRINEAEKVFRRIVDRSLISWNAMIAGFVH 185
Query: 365 SGGRDKEAVKLFSDMIQGQVA--PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
+G K A+ F M + + P+ FT S+LKAC + +Q++ V+ G
Sbjct: 186 AGYGSK-ALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCP 244
Query: 423 D--CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
+ SL+ +Y + G + ARKAF+ + EK ++S+++++ YA+ +A L +
Sbjct: 245 SSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRL 304
Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCA 538
++ ++ +S++ + + +G+Q+ A +K SG E++ + N+++ MY +C
Sbjct: 305 QELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETS--VLNSVVDMYLKCG 362
Query: 539 NVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
V+ A + F EM+ ++VISWT +ITG+ KHG +++ IFY+ML I+P+ + Y+AVLS
Sbjct: 363 LVDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLS 422
Query: 599 ACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADV 658
ACSH+G+I EG + F + + HGI R+EHYAC+VDLLGR+G L EA I +MP+ +V
Sbjct: 423 ACSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNV 482
Query: 659 LVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRM 718
+W+T L CRVHGD ELGK +++L D ++PA ++++SNLY AG+W N R+
Sbjct: 483 GIWQTLLSLCRVHGDIELGKEVGKILLRIDAKNPANYVMMSNLYGQAGYWNEQGNARELG 542
Query: 719 KERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIK-EFGYLPDTNFV 777
+ L KEAG SW+E + +VH F GE SHP T I L + +++ E GY+
Sbjct: 543 NIKGLKKEAGMSWVEIEREVHFFRSGEDSHPLTPVIQETLKEAERRLREELGYVYGLKHE 602
Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLIS---TSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
LH++++E K + L HSEK+A+ L + K K IRVFKNLRVC DCH IK +S +
Sbjct: 603 LHDIDDESKEENLRAHSEKLAIGLALATGGLNQKGKTIRVFKNLRVCVDCHEFIKGLSKI 662
Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
T V+RD+ RFH +DG CSC DYW
Sbjct: 663 TKIAYVVRDAVRFHSFEDGCCSCGDYW 689
Score = 209 bits (533), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 142/493 (28%), Positives = 254/493 (51%), Gaps = 15/493 (3%)
Query: 84 LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
+L+ C R G VH L +S N + N LI +Y KC + A K+F SM +R
Sbjct: 12 ILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCREPLMAYKVFDSM-PER 70
Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
++VSWS+++S +V G ++ +F EM G PNE+ FS ++AC + G I+
Sbjct: 71 NVVSWSALMSGHVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIH 130
Query: 204 GFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLG 262
GF LK G F+ V VG +L+DM+ K G ++ A KVF ++ +++ + W MI G
Sbjct: 131 GFCLKIG-FEMMVEVGNSLVDMYSKCGRIN--EAEKVFRRIVDRSLISWNAMIAGFVHAG 187
Query: 263 CPRDAIRLFLDMILSGF--LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL--DV 318
A+ F M + PD FTL+ ++ ACS + +GKQ+H + +R+G
Sbjct: 188 YGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSA 247
Query: 319 CVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSD 378
+ SLVD+Y KC G + +RK FD++ + ++SW+++I GY Q G EA+ LF
Sbjct: 248 TITGSLVDLYVKC---GYLFSARKAFDQIKEKTMISWSSLILGYAQE-GEFVEAMGLFKR 303
Query: 379 MIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGR 438
+ + + F +S++ + +Q+ AVK L+ V NS++ MY + G
Sbjct: 304 LQELNSQIDSFALSSIIGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKCGL 363
Query: 439 MEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
+++A K F + K+++S+ ++ Y K+ +K+ + +E+ + + ++LS
Sbjct: 364 VDEAEKCFAEMQLKDVISWTVVITGYGKHGLGKKSVRIFYEMLRHNIEPDEVCYLAVLSA 423
Query: 499 ASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR-NVI 556
S G I +GE++ ++++++ G + Y ++ + R ++ A + M + NV
Sbjct: 424 CSHSGMIKEGEELFSKLLETHGIKPRVEHYACVVDLLGRAGRLKEAKHLIDTMPIKPNVG 483
Query: 557 SWTSMITGFAKHG 569
W ++++ HG
Sbjct: 484 IWQTLLSLCRVHG 496
Score = 192 bits (488), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 121/405 (29%), Positives = 219/405 (54%), Gaps = 18/405 (4%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
H+ +G ++ ++ M ++G +P+ T+S LK+C G +H + E
Sbjct: 82 HVLNGDLKGSLSLFSEMGRQGIYPNEFTFSTNLKACGLLNALEKGLQIHGFCLKIGFEMM 141
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
+ NSL+ +YSKCG +NEA K+F+ + + R ++SW++MI+ +V+ G A+ F M
Sbjct: 142 VEVGNSLVDMYSKCGRINEAEKVFRRIVD-RSLISWNAMIAGFVHAGYGSKALDTFGMMQ 200
Query: 173 ELGFC--PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYF-DSDVCVGCALIDMFVKG 229
E P+E+ +++++ACS+T + G I+GFL++ G+ S + +L+D++VK
Sbjct: 201 EANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSGFHCPSSATITGSLVDLYVKC 260
Query: 230 SVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGV 289
L SA K FD++ EK + W+ +I Q G +A+ LF + D F LS +
Sbjct: 261 GY-LFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGLFKRLQELNSQIDSFALSSI 319
Query: 290 VSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLD 349
+ ++ L GKQ+ + A++ L+ V S+VDMY KC G VD++ K F M
Sbjct: 320 IGVFADFALLRQGKQMQALAVKLPSGLETSVLNSVVDMYLKC---GLVDEAEKCFAEMQL 376
Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
+V+SWT +ITGY + G K++V++F +M++ + P+ + +VL AC + E+
Sbjct: 377 KDVISWTVVITGYGKH-GLGKKSVRIFYEMLRHNIEPDEVCYLAVLSACSHSGMIKEGEE 435
Query: 410 VY-----THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL 449
++ TH +K CV + + R+GR+++A+ +++
Sbjct: 436 LFSKLLETHGIKPRVEHYACV----VDLLGRAGRLKEAKHLIDTM 476
Score = 181 bits (460), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 116/409 (28%), Positives = 213/409 (52%), Gaps = 13/409 (3%)
Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
R L ++ C+ L G Q+H + +++G L++ L+DMY KC +
Sbjct: 5 QRQNLVSILRVCTRKGLSDQGGQVHCYLLKSGSGLNLITSNYLIDMYCKCR---EPLMAY 61
Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
KVFD M + NV+SW+A+++G+V +G K ++ LFS+M + + PN FTF++ LKACG L
Sbjct: 62 KVFDSMPERNVVSWSALMSGHVLNGDL-KGSLSLFSEMGRQGIYPNEFTFSTNLKACGLL 120
Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
Q++ +K G + VGNSL+ MY++ GR+ +A K F + +++L+S+N M+
Sbjct: 121 NALEKGLQIHGFCLKIGFEMMVEVGNSLVDMYSKCGRINEAEKVFRRIVDRSLISWNAMI 180
Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGT--SAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
+ KA + +++ + +T SLL SS G I G+QIH +++SG
Sbjct: 181 AGFVHAGYGSKALDTFGMMQEANIKERPDEFTLTSLLKACSSTGMIYAGKQIHGFLVRSG 240
Query: 520 FE--SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
F S+ I +L+ +Y +C + +A + F +++++ +ISW+S+I G+A+ G A+ +
Sbjct: 241 FHCPSSATITGSLVDLYVKCGYLFSARKAFDQIKEKTMISWSSLILGYAQEGEFVEAMGL 300
Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
F ++ + + +++ + L+ +G K +++ + +VD+
Sbjct: 301 FKRLQELNSQIDSFALSSIIGVFADFALLRQG-KQMQALAVKLPSGLETSVLNSVVDMYL 359
Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
+ G + EA + M L DV+ W + HG LGK + + E
Sbjct: 360 KCGLVDEAEKCFAEMQLK-DVISWTVVITGYGKHG---LGKKSVRIFYE 404
>sp|Q9LYU9|PP378_ARATH Pentatricopeptide repeat-containing protein At5g13270,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H90 PE=2
SV=1
Length = 752
Score = 475 bits (1223), Expect = e-133, Method: Compositional matrix adjust.
Identities = 254/703 (36%), Positives = 405/703 (57%), Gaps = 20/703 (2%)
Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
+A EM + G + Y + + AC +++ G +++ ++ G + V + +
Sbjct: 66 EAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHD-RMRMGIENPSVLLQNCV 124
Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
+ M+ + LE A K+FD+M+E N V T MI+ + G A+ LF M+ SG P
Sbjct: 125 LQMYCECR-SLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDKPP 183
Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRK 342
+ ++ + G+Q+H+ IR GL + + +V+MY KC G + +++
Sbjct: 184 SSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSNTSIETGIVNMYVKC---GWLVGAKR 240
Query: 343 VFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
VFD+M ++ T ++ GY Q+G R ++A+KLF D++ V + F F+ VLKAC +L
Sbjct: 241 VFDQMAVKKPVACTGLMVGYTQAG-RARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 403 DSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVD 462
+ N+ +Q++ K G + VG L+ Y + E A +AF+ + E N VS++ ++
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCSSFESACRAFQEIREPNDVSWSAIIS 359
Query: 463 AYAKNLNSEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
Y + E+A + + +++T+ S+ S + G Q+HA IK
Sbjct: 360 GYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLI 419
Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
+ +ALI+MYS+C ++ A +VF+ M++ ++++WT+ I+G A +G A+ AL +F KM
Sbjct: 420 GSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKM 479
Query: 582 LADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGS 641
++ G+KPN +T+IAVL+ACSHAGL+ +G +M ++ + ++HY CM+D+ RSG
Sbjct: 480 VSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYARSGL 539
Query: 642 LTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNL 701
L EAL+F+++MP D + W+ FL C H + ELG+ A E + + DP+D A ++L NL
Sbjct: 540 LDEALKFMKNMPFEPDAMSWKCFLSGCWTHKNLELGEIAGEELRQLDPEDTAGYVLPFNL 599
Query: 702 YASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQL 761
Y AG WE A + K M ER L KE CSWI+ K+H+F VG+ HP+T EIY
Sbjct: 600 YTWAGKWEEAAEMMKLMNERMLKKELSCSWIQEKGKIHRFIVGDKHHPQTQEIYE----- 654
Query: 762 ALKIKEF-GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST--SKSKPIRVFKNL 818
K+KEF G++ F + E ++ L HSE++A+AFGLIS + PI+VFKNL
Sbjct: 655 --KLKEFDGFMEGDMFQCNMTERREQ---LLDHSERLAIAFGLISVHGNAPAPIKVFKNL 709
Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
R C DCH K++S+VTG EIV+RDS RFHH K+GKCSCNDYW
Sbjct: 710 RACPDCHEFAKHVSLVTGHEIVIRDSRRFHHFKEGKCSCNDYW 752
Score = 233 bits (593), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 147/514 (28%), Positives = 270/514 (52%), Gaps = 10/514 (1%)
Query: 58 RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
++ +A L M + G +Y L ++C R+ G+L+H + P+ ++ N
Sbjct: 63 KLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRMRMGIENPSVLLQN 122
Query: 118 SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC 177
++ +Y +C L +A+K+F M ++ + VS ++MIS+Y +G A+ +F ML G
Sbjct: 123 CVLQMYCECRSLEDADKLFDEM-SELNAVSRTTMISAYAEQGILDKAVGLFSGMLASGDK 181
Query: 178 PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAY 237
P ++ ++++ N + G I+ +++ G S+ + +++M+VK L A
Sbjct: 182 PPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAG-LCSNTSIETGIVNMYVKCGW-LVGAK 239
Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
+VFD+M K V T ++ TQ G RDA++LF+D++ G D F S V+ AC+ LE
Sbjct: 240 RVFDQMAVKKPVACTGLMVGYTQAGRARDALKLFVDLVTEGVEWDSFVFSVVLKACASLE 299
Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
GKQ+H+ + GL +V VG LVD Y KC+ S + + + F + + N +SW+A
Sbjct: 300 ELNLGKQIHACVAKLGLESEVSVGTPLVDFYIKCS---SFESACRAFQEIREPNDVSWSA 356
Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
II+GY Q + +EAVK F + + N FT+ S+ +AC L D N+ QV+ A+K
Sbjct: 357 IISGYCQM-SQFEEAVKTFKSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIK 415
Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
R ++LI+MY++ G ++DA + FES+ ++V++ + +A N+ +A L
Sbjct: 416 RSLIGSQYGESALITMYSKCGCLDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRL 475
Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYS 535
++ G+ ++ TF ++L+ S G + +G+ + + K Y+ +I +Y+
Sbjct: 476 FEKMVSCGMKPNSVTFIAVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYA 535
Query: 536 RCANVEAAFQVFKEME-DRNVISWTSMITGFAKH 568
R ++ A + K M + + +SW ++G H
Sbjct: 536 RSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWTH 569
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 133/443 (30%), Positives = 234/443 (52%), Gaps = 21/443 (4%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
+ G + KA+ M G+ P Y+ LLKS + R G+ +H+ + R+ L N
Sbjct: 159 YAEQGILDKAVGLFSGMLASGDKPPSSMYTTLLKSLVNPRALDFGRQIHAHVIRAGLCSN 218
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
+ I ++++Y KCG L A ++F M K+ V+ + ++ Y G+ DA+ +FV+++
Sbjct: 219 TSIETGIVNMYVKCGWLVGAKRVFDQMAVKKP-VACTGLMVGYTQAGRARDALKLFVDLV 277
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
G + + FS V++AC++ E + +G I+ + K G +S+V VG L+D ++K S
Sbjct: 278 TEGVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG-LESEVSVGTPLVDFYIKCS-S 335
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVS 291
ESA + F ++ E N V W+ +I+ Q+ +A++ F + + + + FT + +
Sbjct: 336 FESACRAFQEIREPNDVSWSAIISGYCQMSQFEEAVKTFKSLRSKNASILNSFTYTSIFQ 395
Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
ACS L G Q+H+ AI+ L +L+ MY+KC G +DD+ +VF+ M + +
Sbjct: 396 ACSVLADCNIGGQVHADAIKRSLIGSQYGESALITMYSKC---GCLDDANEVFESMDNPD 452
Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ-- 409
+++WTA I+G+ G EA++LF M+ + PN TF +VL AC + + + EQ
Sbjct: 453 IVAWTAFISGHAYYGNAS-EALRLFEKMVSCGMKPNSVTFIAVLTACSH---AGLVEQGK 508
Query: 410 --VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--Y 464
+ T K A + +I +YARSG +++A K +++ FE + +S+ +
Sbjct: 509 HCLDTMLRKYNVAPTIDHYDCMIDIYARSGLLDEALKFMKNMPFEPDAMSWKCFLSGCWT 568
Query: 465 AKNLN-SEKAFELLHEI--EDTG 484
KNL E A E L ++ EDT
Sbjct: 569 HKNLELGEIAGEELRQLDPEDTA 591
Score = 109 bits (273), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 85/316 (26%), Positives = 150/316 (47%), Gaps = 11/316 (3%)
Query: 50 LIYHLNDGRVQKAI-FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
++ + GR + A+ +DL+T+ G D +S++LK+C +LGK +H+ + +
Sbjct: 257 MVGYTQAGRARDALKLFVDLVTE-GVEWDSFVFSVVLKACASLEELNLGKQIHACVAKLG 315
Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
LE + L+ Y KC A + F+ + D VSWS++IS Y + +A+ F
Sbjct: 316 LESEVSVGTPLVDFYIKCSSFESACRAFQEIREPND-VSWSAIISGYCQMSQFEEAVKTF 374
Query: 169 VEML-ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
+ + N + ++++ +ACS + IG ++ +K S ALI M+
Sbjct: 375 KSLRSKNASILNSFTYTSIFQACSVLADCNIGGQVHADAIKRSLIGSQYGES-ALITMYS 433
Query: 228 KGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
K L+ A +VF+ M + V WT I+ G +A+RLF M+ G P+ T
Sbjct: 434 KCGC-LDDANEVFESMDNPDIVAWTAFISGHAYYGNASEALRLFEKMVSCGMKPNSVTFI 492
Query: 288 GVVSACSELELFTSGKQLHSWAIRT-GLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
V++ACS L GK +R +A + ++D+YA+ G +D++ K
Sbjct: 493 AVLTACSHAGLVEQGKHCLDTMLRKYNVAPTIDHYDCMIDIYAR---SGLLDEALKFMKN 549
Query: 347 M-LDHNVMSWTAIITG 361
M + + MSW ++G
Sbjct: 550 MPFEPDAMSWKCFLSG 565
Score = 80.5 bits (197), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 78/143 (54%), Gaps = 2/143 (1%)
Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
N + + +K+ +AFE L E++ GV S+Y++ L + ++ G +H R+ +
Sbjct: 52 NLHLVSLSKHRKLNEAFEFLQEMDKAGVSVSSYSYQCLFEACRELRSLSHGRLLHDRM-R 110
Query: 518 SGFESNHCIY-NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
G E+ + N ++ MY C ++E A ++F EM + N +S T+MI+ +A+ G +A+
Sbjct: 111 MGIENPSVLLQNCVLQMYCECRSLEDADKLFDEMSELNAVSRTTMISAYAEQGILDKAVG 170
Query: 577 IFYKMLADGIKPNGITYIAVLSA 599
+F MLA G KP Y +L +
Sbjct: 171 LFSGMLASGDKPPSSMYTTLLKS 193
>sp|Q0WN60|PPR48_ARATH Pentatricopeptide repeat-containing protein At1g18485
OS=Arabidopsis thaliana GN=PCMP-H8 PE=2 SV=2
Length = 970
Score = 475 bits (1222), Expect = e-133, Method: Compositional matrix adjust.
Identities = 267/806 (33%), Positives = 440/806 (54%), Gaps = 20/806 (2%)
Query: 63 IFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISL 122
I T DL+ PD TY ++K+C + +G VH L+ ++ L + + N+L+S
Sbjct: 178 ISTTDLL------PDHFTYPCVIKACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSF 231
Query: 123 YSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL----GFCP 178
Y G + +A ++F M +R++VSW+SMI + + G ++ + EM+E F P
Sbjct: 232 YGTHGFVTDALQLFDIM-PERNLVSWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMP 290
Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYK 238
+ V+ C+ + +G ++G+ +K D ++ + AL+DM+ K + +A
Sbjct: 291 DVATLVTVLPVCAREREIGLGKGVHGWAVKL-RLDKELVLNNALMDMYSKCGC-ITNAQM 348
Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG--FLPDRFTLSGVVSACSEL 296
+F KN V W M+ + G + M+ G D T+ V C
Sbjct: 349 IFKMNNNKNVVSWNTMVGGFSAEGDTHGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHE 408
Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
S K+LH ++++ + V + V YAKC GS+ +++VF + V SW
Sbjct: 409 SFLPSLKELHCYSLKQEFVYNELVANAFVASYAKC---GSLSYAQRVFHGIRSKTVNSWN 465
Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
A+I G+ QS + ++ M + P+ FT S+L AC L + ++V+ ++
Sbjct: 466 ALIGGHAQSND-PRLSLDAHLQMKISGLLPDSFTVCSLLSACSKLKSLRLGKEVHGFIIR 524
Query: 417 RGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFEL 476
D V S++S+Y G + + F+++ +K+LVS+NT++ Y +N ++A +
Sbjct: 525 NWLERDLFVYLSVLSLYIHCGELCTVQALFDAMEDKSLVSWNTVITGYLQNGFPDRALGV 584
Query: 477 LHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSR 536
++ G+ + + S + ++ G + HA +K E + I +LI MY++
Sbjct: 585 FRQMVLYGIQLCGISMMPVFGACSLLPSLRLGREAHAYALKHLLEDDAFIACSLIDMYAK 644
Query: 537 CANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAV 596
++ + +VF +++++ SW +MI G+ HG A A+++F +M G P+ +T++ V
Sbjct: 645 NGSITQSSKVFNGLKEKSTASWNAMIMGYGIHGLAKEAIKLFEEMQRTGHNPDDLTFLGV 704
Query: 597 LSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI-RSMPLS 655
L+AC+H+GLI EG ++ M G+ ++HYAC++D+LGR+G L +AL + M
Sbjct: 705 LTACNHSGLIHEGLRYLDQMKSSFGLKPNLKHYACVIDMLGRAGQLDKALRVVAEEMSEE 764
Query: 656 ADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIR 715
ADV +W++ L +CR+H + E+G+ A + E +P+ P ++LLSNLYA G WE V +R
Sbjct: 765 ADVGIWKSLLSSCRIHQNLEMGEKVAAKLFELEPEKPENYVLLSNLYAGLGKWEDVRKVR 824
Query: 716 KRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTN 775
+RM E +L K+AGCSWIE + KV F VGE EI + L +KI + GY PDT
Sbjct: 825 QRMNEMSLRKDAGCSWIELNRKVFSFVVGERFLDGFEEIKSLWSILEMKISKMGYRPDTM 884
Query: 776 FVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVT 835
V H+L EE+K++ L HSEK+A+ +GLI TS+ IRV+KNLR+C DCH A K IS V
Sbjct: 885 SVQHDLSEEEKIEQLRGHSEKLALTYGLIKTSEGTTIRVYKNLRICVDCHNAAKLISKVM 944
Query: 836 GREIVLRDSNRFHHIKDGKCSCNDYW 861
REIV+RD+ RFHH K+G CSC DYW
Sbjct: 945 EREIVVRDNKRFHHFKNGVCSCGDYW 970
Score = 242 bits (617), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 156/628 (24%), Positives = 326/628 (51%), Gaps = 29/628 (4%)
Query: 79 DTYSLLLKSCIRSRNFHLGKLVHSLLTRS-KLEPNSVILNSLISLYSKCGDLNEANKIFK 137
+ LLL++ + ++ +G+ +H L++ S +L + V+ +I++Y+ CG +++ +F
Sbjct: 85 EALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMCGSPDDSRFVFD 144
Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE-LGFCPNEYCFSAVIRACSNTENV 196
++ +K ++ W+++ISSY + + F+EM+ P+ + + VI+AC+ +V
Sbjct: 145 ALRSK-NLFQWNAVISSYSRNELYDEVLETFIEMISTTDLLPDHFTYPCVIKACAGMSDV 203
Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMF-VKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
IG ++G ++K G + DV VG AL+ + G V A ++FD M E+N V W MI
Sbjct: 204 GIGLAVHGLVVKTGLVE-DVFVGNALVSFYGTHGFV--TDALQLFDIMPERNLVSWNSMI 260
Query: 256 TRCTQLGCPRDAIRLFLDMIL----SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIR 311
+ G ++ L +M+ F+PD TL V+ C+ GK +H WA++
Sbjct: 261 RVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGVHGWAVK 320
Query: 312 TGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKE 371
L ++ + +L+DMY+KC G + +++ +F + NV+SW ++ G+ + G
Sbjct: 321 LRLDKELVLNNALMDMYSKC---GCITNAQMIFKMNNNKNVVSWNTMVGGF-SAEGDTHG 376
Query: 372 AVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSL 429
+ M+ G V + T + + C + ++++ +++K+ ++ V N+
Sbjct: 377 TFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFLPSLKELHCYSLKQEFVYNELVANAF 436
Query: 430 ISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA 489
++ YA+ G + A++ F + K + S+N ++ +A++ + + + +++ +G+ +
Sbjct: 437 VASYAKCGSLSYAQRVFHGIRSKTVNSWNALIGGHAQSNDPRLSLDAHLQMKISGLLPDS 496
Query: 490 YTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKE 549
+T SLLS S + ++ G+++H II++ E + +Y +++S+Y C + +F
Sbjct: 497 FTVCSLLSACSKLKSLRLGKEVHGFIIRNWLERDLFVYLSVLSLYIHCGELCTVQALFDA 556
Query: 550 MEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
MED++++SW ++ITG+ ++GF RAL +F +M+ GI+ GI+ + V ACS + G
Sbjct: 557 MEDKSLVSWNTVITGYLQNGFPDRALGVFRQMVLYGIQLCGISMMPVFGACSLLPSLRLG 616
Query: 610 WKHFRSMYDEHGIVQRMEHYAC-MVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
+ Y +++ AC ++D+ ++GS+T++ + + W +
Sbjct: 617 RE--AHAYALKHLLEDDAFIACSLIDMYAKNGSITQSSKVFNGLK-EKSTASWNAMIMGY 673
Query: 669 RVHGDTELGKHAAEMILE-----QDPQD 691
+HG L K A ++ E +P D
Sbjct: 674 GIHG---LAKEAIKLFEEMQRTGHNPDD 698
Score = 168 bits (426), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 107/337 (31%), Positives = 176/337 (52%), Gaps = 12/337 (3%)
Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAI-RTGLALDVCVGCSLVDMYAKCTVDGS 336
FL R L ++ A + + G+++H T L D + ++ MYA C GS
Sbjct: 79 AFLLVREALGLLLQASGKRKDIEMGRKIHQLVSGSTRLRNDDVLCTRIITMYAMC---GS 135
Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG-QVAPNHFTFASVL 395
DDSR VFD + N+ W A+I+ Y ++ D E ++ F +MI + P+HFT+ V+
Sbjct: 136 PDDSRFVFDALRSKNLFQWNAVISSYSRNELYD-EVLETFIEMISTTDLLPDHFTYPCVI 194
Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
KAC + D + V+ VK G D VGN+L+S Y G + DA + F+ + E+NLV
Sbjct: 195 KACAGMSDVGIGLAVHGLVVKTGLVEDVFVGNALVSFYGTHGFVTDALQLFDIMPERNLV 254
Query: 456 SYNTMVDAYAKNLNSEKAFELLHE-IEDTGVGT---SAYTFASLLSGASSIGAIGKGEQI 511
S+N+M+ ++ N SE++F LL E +E+ G G T ++L + IG G+ +
Sbjct: 255 SWNSMIRVFSDNGFSEESFLLLGEMMEENGDGAFMPDVATLVTVLPVCAREREIGLGKGV 314
Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
H +K + + NAL+ MYS+C + A +FK ++NV+SW +M+ GF+ G
Sbjct: 315 HGWAVKLRLDKELVLNNALMDMYSKCGCITNAQMIFKMNNNKNVVSWNTMVGGFSAEGDT 374
Query: 572 ARALEIFYKMLADG--IKPNGITYIAVLSACSHAGLI 606
++ +MLA G +K + +T + + C H +
Sbjct: 375 HGTFDVLRQMLAGGEDVKADEVTILNAVPVCFHESFL 411
Score = 38.1 bits (87), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 52/100 (52%), Gaps = 2/100 (2%)
Query: 57 GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLG-KLVHSLLTRSKLEPNSVI 115
G ++AI + M + G++PD T+ +L +C S H G + + + + L+PN
Sbjct: 677 GLAKEAIKLFEEMQRTGHNPDDLTFLGVLTACNHSGLIHEGLRYLDQMKSSFGLKPNLKH 736
Query: 116 LNSLISLYSKCGDLNEANKIF-KSMGNKRDIVSWSSMISS 154
+I + + G L++A ++ + M + D+ W S++SS
Sbjct: 737 YACVIDMLGRAGQLDKALRVVAEEMSEEADVGIWKSLLSS 776
>sp|Q9LW32|PP258_ARATH Pentatricopeptide repeat-containing protein At3g26782,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H34 PE=2
SV=1
Length = 659
Score = 472 bits (1215), Expect = e-132, Method: Compositional matrix adjust.
Identities = 246/633 (38%), Positives = 375/633 (59%), Gaps = 14/633 (2%)
Query: 239 VFDKMTEKNTV-GWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
+F++ +K V W +I + G +A+ F M P R + + ACS L
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
SGKQ H A G D+ V +L+ MY+ C G ++D+RKVFD + N++SWT+
Sbjct: 91 DIFSGKQTHQQAFVFGYQSDIFVSSALIVMYSTC---GKLEDARKVFDEIPKRNIVSWTS 147
Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTF------ASVLKACGNLLDSNVAEQVY 411
+I GY G +AV LF D++ + + F SV+ AC + + E ++
Sbjct: 148 MIRGY-DLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIH 206
Query: 412 THAVKRGRALDDCVGNSLISMYARSGR--MEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
+ +KRG VGN+L+ YA+ G + ARK F+ + +K+ VSYN+++ YA++
Sbjct: 207 SFVIKRGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGM 266
Query: 470 SEKAFELLHEIEDTGVGT-SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
S +AFE+ + V T +A T +++L S GA+ G+ IH ++I+ G E + +
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
++I MY +C VE A + F M+++NV SWT+MI G+ HG AA+ALE+F M+ G++P
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
N IT+++VL+ACSHAGL EGW+ F +M G+ +EHY CMVDLLGR+G L +A +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
I+ M + D ++W + L ACR+H + EL + + + E D + ++LLS++YA AG W
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIHKNVELAEISVARLFELDSSNCGYYMLLSHIYADAGRW 506
Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
+ V +R MK R L+K G S +E + +VH F +G+ HP+ +IY L +L K+ E
Sbjct: 507 KDVERVRMIMKNRGLVKPPGFSLLELNGEVHVFLIGDEEHPQREKIYEFLAELNRKLLEA 566
Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
GY+ +T+ V H+++EE+K L HSEK+A+AFG+++T + V KNLRVC DCH I
Sbjct: 567 GYVSNTSSVCHDVDEEEKEMTLRVHSEKLAIAFGIMNTVPGSTVNVVKNLRVCSDCHNVI 626
Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
K IS + RE V+RD+ RFHH KDG CSC DYW
Sbjct: 627 KLISKIVDREFVVRDAKRFHHFKDGGCSCGDYW 659
Score = 193 bits (491), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 134/443 (30%), Positives = 227/443 (51%), Gaps = 13/443 (2%)
Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
+F +K D+ SW+S+I+ G +A+ F M +L P F I+ACS+
Sbjct: 31 LFNRYVDKTDVFSWNSVIADLARSGDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLF 90
Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLM 254
++ G + GY SD+ V ALI M+ LE A KVFD++ ++N V WT M
Sbjct: 91 DIFSGKQTHQQAFVFGY-QSDIFVSSALIVMYSTCG-KLEDARKVFDEIPKRNIVSWTSM 148
Query: 255 ITRCTQLGCPRDAIRLFLDMIL------SGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
I G DA+ LF D+++ D L V+SACS + + +HS+
Sbjct: 149 IRGYDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSF 208
Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
I+ G V VG +L+D YAK +G V +RK+FD+++D + +S+ +I++ Y QS G
Sbjct: 209 VIKRGFDRGVSVGNTLLDAYAKGG-EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQS-GM 266
Query: 369 DKEAVKLFSDMIQGQVAP-NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN 427
EA ++F +++ +V N T ++VL A + + + ++ ++ G D VG
Sbjct: 267 SNEAFEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGT 326
Query: 428 SLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGT 487
S+I MY + GR+E ARKAF+ + KN+ S+ M+ Y + ++ KA EL + D+GV
Sbjct: 327 SIIDMYCKCGRVETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRP 386
Query: 488 SAYTFASLLSGASSIGAIGKGEQ-IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQV 546
+ TF S+L+ S G +G + +A + G E Y ++ + R ++ A+ +
Sbjct: 387 NYITFVSVLAACSHAGLHVEGWRWFNAMKGRFGVEPGLEHYGCMVDLLGRAGFLQKAYDL 446
Query: 547 FKEMEDR-NVISWTSMITGFAKH 568
+ M+ + + I W+S++ H
Sbjct: 447 IQRMKMKPDSIIWSSLLAACRIH 469
Score = 180 bits (456), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 148/509 (29%), Positives = 242/509 (47%), Gaps = 50/509 (9%)
Query: 57 GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
G +A+ M + +P ++ +K+C + GK H + + +
Sbjct: 55 GDSAEALLAFSSMRKLSLYPTRSSFPCAIKACSSLFDIFSGKQTHQQAFVFGYQSDIFVS 114
Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML---- 172
++LI +YS CG L +A K+F + KR+IVSW+SMI Y G +DA+ +F ++L
Sbjct: 115 SALIVMYSTCGKLEDARKVFDEI-PKRNIVSWTSMIRGYDLNGNALDAVSLFKDLLVDEN 173
Query: 173 --ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
+ + +VI ACS + I+ F++K G FD V VG L+D + KG
Sbjct: 174 DDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIKRG-FDRGVSVGNTLLDAYAKGG 232
Query: 231 V-DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP-DRFTLSG 288
+ A K+FD++ +K+ V + +++ Q G +A +F ++ + + + TLS
Sbjct: 233 EGGVAVARKIFDQIVDKDRVSYNSIMSVYAQSGMSNEAFEVFRRLVKNKVVTFNAITLST 292
Query: 289 VVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRML 348
V+ A S GK +H IR GL DV VG S++DMY KC G V+ +RK FDRM
Sbjct: 293 VLLAVSHSGALRIGKCIHDQVIRMGLEDDVIVGTSIIDMYCKC---GRVETARKAFDRMK 349
Query: 349 DHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAE 408
+ NV SWTA+I GY G K A++LF MI V PN+ TF SVL AC
Sbjct: 350 NKNVRSWTAMIAGYGMHGHAAK-ALELFPAMIDSGVRPNYITFVSVLAAC---------- 398
Query: 409 QVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNL 468
+HA ++ R +A K + E L Y MVD +
Sbjct: 399 ---SHA----------------GLHVEGWRWFNAMKGRFGV-EPGLEHYGCMVDLLGRAG 438
Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
+KA++L+ ++ + + ++SLL+ + E AR+ + +S++C Y
Sbjct: 439 FLQKAYDLIQRMK---MKPDSIIWSSLLAACRIHKNVELAEISVARLFE--LDSSNCGYY 493
Query: 529 ALIS-MYSRCANVEAAFQVFKEMEDRNVI 556
L+S +Y+ + +V M++R ++
Sbjct: 494 MLLSHIYADAGRWKDVERVRMIMKNRGLV 522
Score = 99.8 bits (247), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 81/260 (31%), Positives = 128/260 (49%), Gaps = 13/260 (5%)
Query: 52 YHLNDGRVQKAIFTLDLMTQKGNHPD---LDTYSLL--LKSCIRSRNFHLGKLVHSLLTR 106
Y LN + DL+ + + D LD+ L+ + +C R L + +HS + +
Sbjct: 152 YDLNGNALDAVSLFKDLLVDENDDDDAMFLDSMGLVSVISACSRVPAKGLTESIHSFVIK 211
Query: 107 SKLEPNSVILNSLISLYSKCGD--LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDA 164
+ + N+L+ Y+K G+ + A KIF + +K D VS++S++S Y G +A
Sbjct: 212 RGFDRGVSVGNTLLDAYAKGGEGGVAVARKIFDQIVDK-DRVSYNSIMSVYAQSGMSNEA 270
Query: 165 IHMFVEMLELGFCP-NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALI 223
+F +++ N S V+ A S++ + IG I+ +++ G D DV VG ++I
Sbjct: 271 FEVFRRLVKNKVVTFNAITLSTVLLAVSHSGALRIGKCIHDQVIRMGLED-DVIVGTSII 329
Query: 224 DMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
DM+ K G V E+A K FD+M KN WT MI G A+ LF MI SG P+
Sbjct: 330 DMYCKCGRV--ETARKAFDRMKNKNVRSWTAMIAGYGMHGHAAKALELFPAMIDSGVRPN 387
Query: 283 RFTLSGVVSACSELELFTSG 302
T V++ACS L G
Sbjct: 388 YITFVSVLAACSHAGLHVEG 407
>sp|Q9LW63|PP251_ARATH Putative pentatricopeptide repeat-containing protein At3g23330
OS=Arabidopsis thaliana GN=PCMP-H32 PE=3 SV=1
Length = 715
Score = 472 bits (1214), Expect = e-132, Method: Compositional matrix adjust.
Identities = 235/655 (35%), Positives = 376/655 (57%), Gaps = 34/655 (5%)
Query: 240 FDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELF 299
F + + W +I T A+ F++M SG PD V+ +C+ +
Sbjct: 62 FKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDL 121
Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAK----------------------------- 330
G+ +H + +R G+ D+ G +L++MYAK
Sbjct: 122 RFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDV 181
Query: 331 ----CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
C + +D R+VF+ M +V+S+ II GY QSG + +A+++ +M + P
Sbjct: 182 KAETCIMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYE-DALRMVREMGTTDLKP 240
Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
+ FT +SVL +D ++++ + +++G D +G+SL+ MYA+S R+ED+ + F
Sbjct: 241 DSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDSERVF 300
Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
L+ ++ +S+N++V Y +N +A L ++ V A F+S++ + + +
Sbjct: 301 SRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLH 360
Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
G+Q+H +++ GF SN I +AL+ MYS+C N++AA ++F M + +SWT++I G A
Sbjct: 361 LGKQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHA 420
Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
HG A+ +F +M G+KPN + ++AVL+ACSH GL+ E W +F SM +G+ Q +
Sbjct: 421 LHGHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQEL 480
Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
EHYA + DLLGR+G L EA FI M + VW T L +C VH + EL + AE I
Sbjct: 481 EHYAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVHKNLELAEKVAEKIFT 540
Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
D ++ A++L+ N+YAS G W+ +A +R RM+++ L K+ CSWIE NK H F G+
Sbjct: 541 VDSENMGAYVLMCNMYASNGRWKEMAKLRLRMRKKGLRKKPACSWIEMKNKTHGFVSGDR 600
Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
SHP +I L + ++++ GY+ DT+ VLH+++EE K + LF HSE++AVAFG+I+T
Sbjct: 601 SHPSMDKINEFLKAVMEQMEKEGYVADTSGVLHDVDEEHKRELLFGHSERLAVAFGIINT 660
Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
IRV KN+R+C DCH AIK+IS +T REI++RD++RFHH G CSC DYW
Sbjct: 661 EPGTTIRVTKNIRICTDCHVAIKFISKITEREIIVRDNSRFHHFNRGNCSCGDYW 715
Score = 205 bits (522), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 141/523 (26%), Positives = 266/523 (50%), Gaps = 46/523 (8%)
Query: 84 LLKSCIRSRNFHLGKLVHSLLTRSK-LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
L+K+ R ++ K +H+ R++ L S + +IS+Y+ L+EA +FK++ +
Sbjct: 11 LIKNPTRIKSKSQAKQLHAQFIRTQSLSHTSASI--VISIYTNLKLLHEALLLFKTLKSP 68
Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
+++W S+I + ++ A+ FVEM G CP+ F +V+++C+ ++ G +
Sbjct: 69 -PVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESV 127
Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVK----------GSV--------------------- 231
+GF+++ G D D+ G AL++M+ K G+V
Sbjct: 128 HGFIVRLG-MDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETC 186
Query: 232 ----DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
++S +VF+ M K+ V + +I Q G DA+R+ +M + PD FTLS
Sbjct: 187 IMPFGIDSVRRVFEVMPRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLS 246
Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
V+ SE GK++H + IR G+ DV +G SLVDMYAK ++DS +VF R+
Sbjct: 247 SVLPIFSEYVDVIKGKEIHGYVIRKGIDSDVYIGSSLVDMYAK---SARIEDSERVFSRL 303
Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
+ +SW +++ GYVQ+ GR EA++LF M+ +V P F+SV+ AC +L ++
Sbjct: 304 YCRDGISWNSLVAGYVQN-GRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLG 362
Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
+Q++ + ++ G + + ++L+ MY++ G ++ ARK F+ + + VS+ ++ +A +
Sbjct: 363 KQLHGYVLRGGFGSNIFIASALVDMYSKCGNIKAARKIFDRMNVLDEVSWTAIIMGHALH 422
Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCI 526
+ +A L E++ GV + F ++L+ S +G + + + K G
Sbjct: 423 GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEH 482
Query: 527 YNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSMITGFAKH 568
Y A+ + R +E A+ +M S W+++++ + H
Sbjct: 483 YAAVADLLGRAGKLEEAYNFISKMCVEPTGSVWSTLLSSCSVH 525
Score = 186 bits (473), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 128/455 (28%), Positives = 223/455 (49%), Gaps = 67/455 (14%)
Query: 33 SPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSR 92
SPP +A + +++ ++ KA+ + M G PD + + +LKSC
Sbjct: 67 SPPVLAWKSVIRCFTDQSLF-------SKALASFVEMRASGRCPDHNVFPSVLKSCTMMM 119
Query: 93 NFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK-----------------------CGD- 128
+ G+ VH + R ++ + N+L+++Y+K GD
Sbjct: 120 DLRFGESVHGFIVRLGMDCDLYTGNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDE 179
Query: 129 ------------LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
++ ++F+ M ++D+VS++++I+ Y G DA+ M EM
Sbjct: 180 DVKAETCIMPFGIDSVRRVFEVM-PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDL 238
Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
P+ + S+V+ S +V G I+G++++ G DSDV +G +L+DM+ K S +E +
Sbjct: 239 KPDSFTLSSVLPIFSEYVDVIKGKEIHGYVIRKG-IDSDVYIGSSLVDMYAK-SARIEDS 296
Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
+VF ++ ++ + W ++ Q G +A+RLF M+ + P S V+ AC+ L
Sbjct: 297 ERVFSRLYCRDGISWNSLVAGYVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHL 356
Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
GKQLH + +R G ++ + +LVDMY+KC G++ +RK+FDRM + +SWT
Sbjct: 357 ATLHLGKQLHGYVLRGGFGSNIFIASALVDMYSKC---GNIKAARKIFDRMNVLDEVSWT 413
Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--LLDS-----NVAEQ 409
AII G+ G EAV LF +M + V PN F +VL AC + L+D N +
Sbjct: 414 AIIMGHALH-GHGHEAVSLFEEMKRQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTK 472
Query: 410 VY--THAVKRGRALDDCVGNSLISMYARSGRMEDA 442
VY ++ A+ D +G R+G++E+A
Sbjct: 473 VYGLNQELEHYAAVADLLG--------RAGKLEEA 499
Score = 92.4 bits (228), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 99/208 (47%), Gaps = 3/208 (1%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
++ +GR +A+ M P +S ++ +C HLGK +H + R N
Sbjct: 318 YVQNGRYNEALRLFRQMVTAKVKPGAVAFSSVIPACAHLATLHLGKQLHGYVLRGGFGSN 377
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
I ++L+ +YSKCG++ A KIF M N D VSW+++I + G +A+ +F EM
Sbjct: 378 IFIASALVDMYSKCGNIKAARKIFDRM-NVLDEVSWTAIIMGHALHGHGHEAVSLFEEMK 436
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
G PN+ F AV+ ACS+ V + + K + ++ A+ D+ +
Sbjct: 437 RQGVKPNQVAFVAVLTACSHVGLVDEAWGYFNSMTKVYGLNQELEHYAAVADLLGRAG-K 495
Query: 233 LESAYKVFDKM-TEKNTVGWTLMITRCT 259
LE AY KM E W+ +++ C+
Sbjct: 496 LEEAYNFISKMCVEPTGSVWSTLLSSCS 523
Score = 54.3 bits (129), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 58/297 (19%), Positives = 126/297 (42%), Gaps = 39/297 (13%)
Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAK 466
A+Q++ + R ++L + +IS+Y + +A F++L ++++ +++ +
Sbjct: 24 AKQLHAQFI-RTQSLSHTSASIVISIYTNLKLLHEALLLFKTLKSPPVLAWKSVIRCFTD 82
Query: 467 NLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCI 526
KA E+ +G F S+L + + + GE +H I++ G + +
Sbjct: 83 QSLFSKALASFVEMRASGRCPDHNVFPSVLKSCTMMMDLRFGESVHGFIVRLGMDCDLYT 142
Query: 527 YNALISMYS--------------------RCAN----------------VEAAFQVFKEM 550
NAL++MY+ R +N +++ +VF+ M
Sbjct: 143 GNALMNMYAKLLGMGSKISVGNVFDEMPQRTSNSGDEDVKAETCIMPFGIDSVRRVFEVM 202
Query: 551 EDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGW 610
++V+S+ ++I G+A+ G AL + +M +KP+ T +VL S + +G
Sbjct: 203 PRKDVVSYNTIIAGYAQSGMYEDALRMVREMGTTDLKPDSFTLSSVLPIFSEYVDVIKG- 261
Query: 611 KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGA 667
K GI + + +VD+ +S + ++ E + S D + W + +
Sbjct: 262 KEIHGYVIRKGIDSDVYIGSSLVDMYAKSARIEDS-ERVFSRLYCRDGISWNSLVAG 317
Score = 47.8 bits (112), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 61/117 (52%), Gaps = 1/117 (0%)
Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
+ +S +L+ + I + + +Q+HA+ I++ S H + +IS+Y+ + A
Sbjct: 1 MSSSKALIKTLIKNPTRIKSKSQAKQLHAQFIRTQSLS-HTSASIVISIYTNLKLLHEAL 59
Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
+FK ++ V++W S+I F ++AL F +M A G P+ + +VL +C+
Sbjct: 60 LLFKTLKSPPVLAWKSVIRCFTDQSLFSKALASFVEMRASGRCPDHNVFPSVLKSCT 116
>sp|Q9LTV8|PP224_ARATH Pentatricopeptide repeat-containing protein At3g12770
OS=Arabidopsis thaliana GN=PCMP-H43 PE=2 SV=1
Length = 694
Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust.
Identities = 236/632 (37%), Positives = 375/632 (59%), Gaps = 7/632 (1%)
Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
D+ A +VFD + W +I ++ +DA+ ++ +M L+ PD FT ++
Sbjct: 68 DITFARQVFDDLPRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLLK 127
Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD--RMLD 349
ACS L G+ +H+ R G DV V L+ +YAKC GS +R VF+ + +
Sbjct: 128 ACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGLIALYAKCRRLGS---ARTVFEGLPLPE 184
Query: 350 HNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQ 409
++SWTAI++ Y Q+G EA+++FS M + V P+ SVL A L D
Sbjct: 185 RTIVSWTAIVSAYAQNG-EPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRS 243
Query: 410 VYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLN 469
++ VK G ++ + SL +MYA+ G++ A+ F+ + NL+ +N M+ YAKN
Sbjct: 244 IHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSPNLILWNAMISGYAKNGY 303
Query: 470 SEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNA 529
+ +A ++ HE+ + V + S +S + +G++ + ++ + +S + + I +A
Sbjct: 304 AREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFISSA 363
Query: 530 LISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPN 589
LI M+++C +VE A VF DR+V+ W++MI G+ HG A A+ ++ M G+ PN
Sbjct: 364 LIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGVHPN 423
Query: 590 GITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
+T++ +L AC+H+G++ EGW F M D H I + +HYAC++DLLGR+G L +A E I
Sbjct: 424 DVTFLGLLMACNHSGMVREGWWFFNRMAD-HKINPQQQHYACVIDLLGRAGHLDQAYEVI 482
Query: 650 RSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
+ MP+ V VW L AC+ H ELG++AA+ + DP + ++ LSNLYA+A W+
Sbjct: 483 KCMPVQPGVTVWGALLSACKKHRHVELGEYAAQQLFSIDPSNTGHYVQLSNLYAAARLWD 542
Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
VA +R RMKE+ L K+ GCSW+E ++ F VG+ SHP+ EI +++ + ++KE G
Sbjct: 543 RVAEVRVRMKEKGLNKDVGCSWVEVRGRLEAFRVGDKSHPRYEEIERQVEWIESRLKEGG 602
Query: 770 YLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIK 829
++ + + LH+L +E+ + L HSE+IA+A+GLIST + P+R+ KNLR C +CH A K
Sbjct: 603 FVANKDASLHDLNDEEAEETLCSHSERIAIAYGLISTPQGTPLRITKNLRACVNCHAATK 662
Query: 830 YISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
IS + REIV+RD+NRFHH KDG CSC DYW
Sbjct: 663 LISKLVDREIVVRDTNRFHHFKDGVCSCGDYW 694
Score = 198 bits (503), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 134/504 (26%), Positives = 244/504 (48%), Gaps = 14/504 (2%)
Query: 68 LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
L T G H D Y+ L+ S K +H+ L L+ + ++ LI S G
Sbjct: 12 LYTNSGIHSD-SFYASLIDSATHKAQL---KQIHARLLVLGLQFSGFLITKLIHASSSFG 67
Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
D+ A ++F + + I W+++I Y DA+ M+ M P+ + F ++
Sbjct: 68 DITFARQVFDDL-PRPQIFPWNAIIRGYSRNNHFQDALLMYSNMQLARVSPDSFTFPHLL 126
Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD--KMTE 245
+ACS ++ +G ++ + + G FD+DV V LI ++ K L SA VF+ + E
Sbjct: 127 KACSGLSHLQMGRFVHAQVFRLG-FDADVFVQNGLIALYAKCR-RLGSARTVFEGLPLPE 184
Query: 246 KNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQL 305
+ V WT +++ Q G P +A+ +F M PD L V++A + L+ G+ +
Sbjct: 185 RTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQGRSI 244
Query: 306 HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQS 365
H+ ++ GL ++ + SL MYAKC G V ++ +FD+M N++ W A+I+GY ++
Sbjct: 245 HASVVKMGLEIEPDLLISLNTMYAKC---GQVATAKILFDKMKSPNLILWNAMISGYAKN 301
Query: 366 GGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCV 425
G +EA+ +F +MI V P+ + S + AC + A +Y + + D +
Sbjct: 302 -GYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRDDVFI 360
Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
++LI M+A+ G +E AR F+ ++++V ++ M+ Y + + +A L +E GV
Sbjct: 361 SSALIDMFAKCGSVEGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAMERGGV 420
Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQ 545
+ TF LL + G + +G R+ Y +I + R +++ A++
Sbjct: 421 HPNDVTFLGLLMACNHSGMVREGWWFFNRMADHKINPQQQHYACVIDLLGRAGHLDQAYE 480
Query: 546 VFKEMEDR-NVISWTSMITGFAKH 568
V K M + V W ++++ KH
Sbjct: 481 VIKCMPVQPGVTVWGALLSACKKH 504
Score = 184 bits (468), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 107/343 (31%), Positives = 189/343 (55%), Gaps = 9/343 (2%)
Query: 60 QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSL 119
Q A+ M PD T+ LLK+C + +G+ VH+ + R + + + N L
Sbjct: 101 QDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQNGL 160
Query: 120 ISLYSKCGDLNEANKIFKSMG-NKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCP 178
I+LY+KC L A +F+ + +R IVSW++++S+Y G+ ++A+ +F +M ++ P
Sbjct: 161 IALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKP 220
Query: 179 NEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY-FDSDVCVGCALIDMFVKGSVDLESAY 237
+ +V+ A + +++ G I+ ++K G + D+ + +L M+ K + +A
Sbjct: 221 DWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLI--SLNTMYAKCG-QVATAK 277
Query: 238 KVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
+FDKM N + W MI+ + G R+AI +F +MI PD +++ +SAC+++
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
+ ++ + R+ DV + +L+DM+AKC GSV+ +R VFDR LD +V+ W+A
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKC---GSVEGARLVFDRTLDRDVVVWSA 394
Query: 358 IITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
+I GY GR +EA+ L+ M +G V PN TF +L AC +
Sbjct: 395 MIVGY-GLHGRAREAISLYRAMERGGVHPNDVTFLGLLMACNH 436
Score = 108 bits (271), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 125/470 (26%), Positives = 203/470 (43%), Gaps = 64/470 (13%)
Query: 45 PLSNRLIY--------HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHL 96
PL R I + +G +A+ M + PD +L + ++
Sbjct: 181 PLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMDVKPDWVALVSVLNAFTCLQDLKQ 240
Query: 97 GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
G+ +H+ + + LE +L SL ++Y+KCG + A +F M + +++ W++MIS Y
Sbjct: 241 GRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAKILFDKMKSP-NLILWNAMISGYA 299
Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
G +AI MF EM+ P+ ++ I AC+ ++ +Y ++ + Y D DV
Sbjct: 300 KNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVGSLEQARSMYEYVGRSDYRD-DV 358
Query: 217 CVGCALIDMFVK-GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
+ ALIDMF K GSV E A VFD+ +++ V W+ MI G R+AI L+ M
Sbjct: 359 FISSALIDMFAKCGSV--EGARLVFDRTLDRDVVVWSAMIVGYGLHGRAREAISLYRAME 416
Query: 276 LSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVD- 334
G P+ T G++ AC+ SG W +A D + + C +D
Sbjct: 417 RGGVHPNDVTFLGLLMACNH-----SGMVREGWWFFNRMA-DHKINPQ--QQHYACVIDL 468
Query: 335 ----GSVDDSRKVFDRM-LDHNVMSWTAIITG-----YVQSGGRDKEAVKLFSDMIQGQV 384
G +D + +V M + V W A+++ +V+ G + A +LFS +
Sbjct: 469 LGRAGHLDQAYEVIKCMPVQPGVTVWGALLSACKKHRHVELG--EYAAQQLFS------I 520
Query: 385 APN---HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYAR------ 435
P+ H+ S L A L D VAE + + L+ VG S + + R
Sbjct: 521 DPSNTGHYVQLSNLYAAARLWD-RVAE---VRVRMKEKGLNKDVGCSWVEVRGRLEAFRV 576
Query: 436 ----SGRMEDARKAFE----SLFEKNLVSYNTMVDAYAKNLNSEKAFELL 477
R E+ + E L E V+ DA +LN E+A E L
Sbjct: 577 GDKSHPRYEEIERQVEWIESRLKEGGFVANK---DASLHDLNDEEAEETL 623
Score = 100 bits (248), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 76/353 (21%), Positives = 162/353 (45%), Gaps = 36/353 (10%)
Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
+Q++ + G + LI + G + AR+ F+ L + +N ++ Y++N
Sbjct: 38 KQIHARLLVLGLQFSGFLITKLIHASSSFGDITFARQVFDDLPRPQIFPWNAIIRGYSRN 97
Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
+ + A + ++ V ++TF LL S + + G +HA++ + GF+++ +
Sbjct: 98 NHFQDALLMYSNMQLARVSPDSFTFPHLLKACSGLSHLQMGRFVHAQVFRLGFDADVFVQ 157
Query: 528 NALISMYSRCANVEAAFQVFK--EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG 585
N LI++Y++C + +A VF+ + +R ++SWT++++ +A++G ALEIF +M
Sbjct: 158 NGLIALYAKCRRLGSARTVFEGLPLPERTIVSWTAIVSAYAQNGEPMEALEIFSQMRKMD 217
Query: 586 IKPNGITYIAVLSACS-----------HAGLISEGWK-------HFRSMYDEHGIV---- 623
+KP+ + ++VL+A + HA ++ G + +MY + G V
Sbjct: 218 VKPDWVALVSVLNAFTCLQDLKQGRSIHASVVKMGLEIEPDLLISLNTMYAKCGQVATAK 277
Query: 624 ---QRMEH-----YACMVDLLGRSGSLTEALEFIRSM---PLSADVLVWRTFLGACRVHG 672
+M+ + M+ ++G EA++ M + D + + + AC G
Sbjct: 278 ILFDKMKSPNLILWNAMISGYAKNGYAREAIDMFHEMINKDVRPDTISITSAISACAQVG 337
Query: 673 DTELGKHAAEMILEQDPQDPA-AHILLSNLYASAGHWEYVANIRKRMKERNLI 724
E + E + D +D L +++A G E + R +R+++
Sbjct: 338 SLEQARSMYEYVGRSDYRDDVFISSALIDMFAKCGSVEGARLVFDRTLDRDVV 390
>sp|Q9CAA8|PP108_ARATH Putative pentatricopeptide repeat-containing protein At1g68930
OS=Arabidopsis thaliana GN=PCMP-H22 PE=3 SV=1
Length = 743
Score = 471 bits (1212), Expect = e-131, Method: Compositional matrix adjust.
Identities = 245/655 (37%), Positives = 382/655 (58%), Gaps = 37/655 (5%)
Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI--LSGFLPDRFTLSGVVSACSEL 296
F+K+ +++ V W ++I + G A++ + M+ S L R TL ++ S
Sbjct: 94 TFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTMMRDFSANLT-RVTLMTMLKLSSSN 152
Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVM--- 353
+ GKQ+H I+ G + VG L+ MYA G + D++KVF + D N +
Sbjct: 153 GHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANV---GCISDAKKVFYGLDDRNTVMYN 209
Query: 354 ---------------------------SWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAP 386
SW A+I G Q+G KEA++ F +M +
Sbjct: 210 SLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKGLAQNG-LAKEAIECFREMKVQGLKM 268
Query: 387 NHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAF 446
+ + F SVL ACG L N +Q++ ++ VG++LI MY + + A+ F
Sbjct: 269 DQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIYVGSALIDMYCKCKCLHYAKTVF 328
Query: 447 ESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIG 506
+ + +KN+VS+ MV Y + +E+A ++ +++ +G+ YT +S +++ ++
Sbjct: 329 DRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLE 388
Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
+G Q H + I SG + N+L+++Y +C +++ + ++F EM R+ +SWT+M++ +A
Sbjct: 389 EGSQFHGKAITSGLIHYVTVSNSLVTLYGKCGDIDDSTRLFNEMNVRDAVSWTAMVSAYA 448
Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRM 626
+ G A +++F KM+ G+KP+G+T V+SACS AGL+ +G ++F+ M E+GIV +
Sbjct: 449 QFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSI 508
Query: 627 EHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILE 686
HY+CM+DL RSG L EA+ FI MP D + W T L ACR G+ E+GK AAE ++E
Sbjct: 509 GHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKGNLEIGKWAAESLIE 568
Query: 687 QDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGET 746
DP PA + LLS++YAS G W+ VA +R+ M+E+N+ KE G SWI+ K+H F +
Sbjct: 569 LDPHHPAGYTLLSSIYASKGKWDSVAQLRRGMREKNVKKEPGQSWIKWKGKLHSFSADDE 628
Query: 747 SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST 806
S P +IYA+L++L KI + GY PDT+FV H++EE KV+ L HSE++A+AFGLI
Sbjct: 629 SSPYLDQIYAKLEELNNKIIDNGYKPDTSFVHHDVEEAVKVKMLNYHSERLAIAFGLIFV 688
Query: 807 SKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
+PIRV KNLRVC DCH A K+IS VTGREI++RD+ RFH KDG CSC D+W
Sbjct: 689 PSGQPIRVGKNLRVCVDCHNATKHISSVTGREILVRDAVRFHRFKDGTCSCGDFW 743
Score = 204 bits (518), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 139/495 (28%), Positives = 240/495 (48%), Gaps = 44/495 (8%)
Query: 110 EPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFV 169
+PN N+L+ YSK G ++E F+ + + RD V+W+ +I Y G A+ +
Sbjct: 69 QPNLFSWNNLLLAYSKAGLISEMESTFEKLPD-RDGVTWNVLIEGYSLSGLVGAAVKAYN 127
Query: 170 EMLELGFCPN--EYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV 227
M+ F N +++ S+ +V++G I+G ++K G F+S + VG L+ M+
Sbjct: 128 TMMR-DFSANLTRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLG-FESYLLVGSPLLYMYA 185
Query: 228 KGSVDLESAYKVFDKMTEKNT------------------------------VGWTLMITR 257
+ A KVF + ++NT V W MI
Sbjct: 186 NVGC-ISDAKKVFYGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGMEKDSVSWAAMIKG 244
Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
Q G ++AI F +M + G D++ V+ AC L GKQ+H+ IRT
Sbjct: 245 LAQNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDH 304
Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
+ VG +L+DMY KC + ++ VFDRM NV+SWTA++ GY Q+ GR +EAVK+F
Sbjct: 305 IYVGSALIDMYCKCKC---LHYAKTVFDRMKQKNVVSWTAMVVGYGQT-GRAEEAVKIFL 360
Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
DM + + P+H+T + AC N+ Q + A+ G V NSL+++Y + G
Sbjct: 361 DMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKCG 420
Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLS 497
++D+ + F + ++ VS+ MV AYA+ + + +L ++ G+ T ++S
Sbjct: 421 DIDDSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVIS 480
Query: 498 GASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME-DRN 554
S G + KG++ + +++ S + I Y+ +I ++SR +E A + M +
Sbjct: 481 ACSRAGLVEKGQR-YFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPD 539
Query: 555 VISWTSMITGFAKHG 569
I WT++++ G
Sbjct: 540 AIGWTTLLSACRNKG 554
Score = 197 bits (500), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 193/365 (52%), Gaps = 16/365 (4%)
Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
N+V+ NSL+ CG + +A ++F+ M ++D VSW++MI G +AI F EM
Sbjct: 204 NTVMYNSLMGGLLACGMIEDALQLFRGM--EKDSVSWAAMIKGLAQNGLAKEAIECFREM 261
Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
G ++Y F +V+ AC + G I+ +++ F + VG ALIDM+ K
Sbjct: 262 KVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTN-FQDHIYVGSALIDMYCKCKC 320
Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
L A VFD+M +KN V WT M+ Q G +A+++FLDM SG PD +TL +S
Sbjct: 321 -LHYAKTVFDRMKQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRSGIDPDHYTLGQAIS 379
Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
AC+ + G Q H AI +GL V V SLV +Y KC G +DDS ++F+ M +
Sbjct: 380 ACANVSSLEEGSQFHGKAITSGLIHYVTVSNSLVTLYGKC---GDIDDSTRLFNEMNVRD 436
Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQ 409
+SWTA+++ Y Q GR E ++LF M+Q + P+ T V+ AC L++ Q
Sbjct: 437 AVSWTAMVSAYAQF-GRAVETIQLFDKMVQHGLKPDGVTLTGVISACSRAGLVEKG---Q 492
Query: 410 VYTHAVKRGRALDDCVG--NSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
Y + + +G + +I +++RSGR+E+A + + F + + + T++ A
Sbjct: 493 RYFKLMTSEYGIVPSIGHYSCMIDLFSRSGRLEEAMRFINGMPFPPDAIGWTTLLSACRN 552
Query: 467 NLNSE 471
N E
Sbjct: 553 KGNLE 557
Score = 125 bits (313), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 76/308 (24%), Positives = 156/308 (50%), Gaps = 8/308 (2%)
Query: 55 NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
+G ++AI M +G D + +L +C + GK +H+ + R+ + +
Sbjct: 247 QNGLAKEAIECFREMKVQGLKMDQYPFGSVLPACGGLGAINEGKQIHACIIRTNFQDHIY 306
Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
+ ++LI +Y KC L+ A +F M ++++VSW++M+ Y G+ +A+ +F++M
Sbjct: 307 VGSALIDMYCKCKCLHYAKTVFDRM-KQKNVVSWTAMVVGYGQTGRAEEAVKIFLDMQRS 365
Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
G P+ Y I AC+N ++ G +G + G V V +L+ ++ K D++
Sbjct: 366 GIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHY-VTVSNSLVTLYGKCG-DID 423
Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
+ ++F++M ++ V WT M++ Q G + I+LF M+ G PD TL+GV+SACS
Sbjct: 424 DSTRLFNEMNVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGLKPDGVTLTGVISACS 483
Query: 295 ELELFTSGKQLHSWAI-RTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNV 352
L G++ G+ + ++D++++ G ++++ + + M +
Sbjct: 484 RAGLVEKGQRYFKLMTSEYGIVPSIGHYSCMIDLFSR---SGRLEEAMRFINGMPFPPDA 540
Query: 353 MSWTAIIT 360
+ WT +++
Sbjct: 541 IGWTTLLS 548
Score = 100 bits (250), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 104/214 (48%), Gaps = 17/214 (7%)
Query: 57 GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL 116
GR ++A+ M + G PD T + +C + G H S L +
Sbjct: 350 GRAEEAVKIFLDMQRSGIDPDHYTLGQAISACANVSSLEEGSQFHGKAITSGLIHYVTVS 409
Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
NSL++LY KCGD++++ ++F M N RD VSW++M+S+Y G+ V+ I +F +M++ G
Sbjct: 410 NSLVTLYGKCGDIDDSTRLFNEM-NVRDAVSWTAMVSAYAQFGRAVETIQLFDKMVQHGL 468
Query: 177 CPNEYCFSAVIRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFVKG 229
P+ + VI ACS V G YG + G++ +ID+F +
Sbjct: 469 KPDGVTLTGVISACSRAGLVEKGQRYFKLMTSEYGIVPSIGHYS-------CMIDLFSR- 520
Query: 230 SVDLESAYKVFDKMT-EKNTVGWTLMITRCTQLG 262
S LE A + + M + +GWT +++ C G
Sbjct: 521 SGRLEEAMRFINGMPFPPDAIGWTTLLSACRNKG 554
Score = 97.4 bits (241), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 129/273 (47%), Gaps = 46/273 (16%)
Query: 376 FSDMIQGQVA-----PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
+ MI G + P F + +++ A + S A +V+ R + N+L+
Sbjct: 24 YVKMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVF----DRIPQPNLFSWNNLL 79
Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN---LNSEKAFELLHEIEDTGVGT 487
Y+++G + + FE L +++ V++N +++ Y+ + + KA+ + + D
Sbjct: 80 LAYSKAGLISEMESTFEKLPDRDGVTWNVLIEGYSLSGLVGAAVKAYNTM--MRDFSANL 137
Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES------------------------- 522
+ T ++L +SS G + G+QIH ++IK GFES
Sbjct: 138 TRVTLMTMLKLSSSNGHVSLGKQIHGQVIKLGFESYLLVGSPLLYMYANVGCISDAKKVF 197
Query: 523 ------NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
N +YN+L+ C +E A Q+F+ ME ++ +SW +MI G A++G A A+E
Sbjct: 198 YGLDDRNTVMYNSLMGGLLACGMIEDALQLFRGME-KDSVSWAAMIKGLAQNGLAKEAIE 256
Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEG 609
F +M G+K + + +VL AC G I+EG
Sbjct: 257 CFREMKVQGLKMDQYPFGSVLPACGGLGAINEG 289
Score = 42.4 bits (98), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/108 (23%), Positives = 54/108 (50%), Gaps = 4/108 (3%)
Query: 509 EQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKH 568
+ IH II++ +YN ++ Y+ + A +VF + N+ SW +++ ++K
Sbjct: 26 KMIHGNIIRALPYPETFLYNNIVHAYALMKSSTYARRVFDRIPQPNLFSWNNLLLAYSKA 85
Query: 569 GFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
G + +E ++ L D +G+T+ ++ S +GL+ K + +M
Sbjct: 86 GLISE-MESTFEKLPD---RDGVTWNVLIEGYSLSGLVGAAVKAYNTM 129
>sp|Q9SUH6|PP341_ARATH Pentatricopeptide repeat-containing protein At4g30700
OS=Arabidopsis thaliana GN=DYW9 PE=2 SV=1
Length = 792
Score = 468 bits (1203), Expect = e-130, Method: Compositional matrix adjust.
Identities = 260/749 (34%), Positives = 419/749 (55%), Gaps = 12/749 (1%)
Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE- 173
+L L S G + A IF S+ + D+ ++ ++ + ++ +F + +
Sbjct: 54 LLTKLTQRLSDLGAIYYARDIFLSV-QRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKS 112
Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
PN ++ I A S + G +I+G + G DS++ +G ++ M+ K +
Sbjct: 113 TDLKPNSSTYAFAISAASGFRDDRAGRVIHGQAVVDG-CDSELLLGSNIVKMYFK-FWRV 170
Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMI-LSGFLPDRFTLSGVVSA 292
E A KVFD+M EK+T+ W MI+ + ++I++F D+I S D TL ++ A
Sbjct: 171 EDARKVFDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPA 230
Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
+EL+ G Q+HS A +TG V + +Y+KC G + +F ++
Sbjct: 231 VAELQELRLGMQIHSLATKTGCYSHDYVLTGFISLYSKC---GKIKMGSALFREFRKPDI 287
Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
+++ A+I GY S G + ++ LF +++ T S++ G+L+ + ++
Sbjct: 288 VAYNAMIHGYT-SNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLM---LIYAIHG 343
Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
+ +K V +L ++Y++ +E ARK F+ EK+L S+N M+ Y +N +E
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTED 403
Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
A L E++ + + T +LS + +GA+ G+ +H + + FES+ + ALI
Sbjct: 404 AISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIG 463
Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
MY++C ++ A ++F M +N ++W +MI+G+ HG AL IFY+ML GI P +T
Sbjct: 464 MYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVT 523
Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
++ VL ACSHAGL+ EG + F SM +G ++HYACMVD+LGR+G L AL+FI +M
Sbjct: 524 FLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRALQFIEAM 583
Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
+ VW T LGACR+H DT L + +E + E DP + H+LLSN++++ ++ A
Sbjct: 584 SIEPGSSVWETLLGACRIHKDTNLARTVSEKLFELDPDNVGYHVLLSNIHSADRNYPQAA 643
Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
+R+ K+R L K G + IE H F G+ SHP+ EIY +L++L K++E GY P
Sbjct: 644 TVRQTAKKRKLAKAPGYTLIEIGETPHVFTSGDQSHPQVKEIYEKLEKLEGKMREAGYQP 703
Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYIS 832
+T LH++EEE++ + HSE++A+AFGLI+T IR+ KNLRVC DCHT K IS
Sbjct: 704 ETELALHDVEEEERELMVKVHSERLAIAFGLIATEPGTEIRIIKNLRVCLDCHTVTKLIS 763
Query: 833 MVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
+T R IV+RD+NRFHH KDG CSC DYW
Sbjct: 764 KITERVIVVRDANRFHHFKDGVCSCGDYW 792
Score = 174 bits (440), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 133/459 (28%), Positives = 228/459 (49%), Gaps = 35/459 (7%)
Query: 36 FIAQPTTSEPLSNRLI--YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRN 93
F P L N +I Y N+ V+ DL+ + D T +L + +
Sbjct: 177 FDRMPEKDTILWNTMISGYRKNEMYVESIQVFRDLINESCTRLDTTTLLDILPAVAELQE 236
Query: 94 FHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMIS 153
LG +HSL T++ + +L ISLYSKCG + + +F+ K DIV++++MI
Sbjct: 237 LRLGMQIHSLATKTGCYSHDYVLTGFISLYSKCGKIKMGSALFREF-RKPDIVAYNAMIH 295
Query: 154 SYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAI-GHI-----IYGFLL 207
Y + G+ ++ +F E++ G A +R+ + V + GH+ I+G+ L
Sbjct: 296 GYTSNGETELSLSLFKELMLSG---------ARLRSSTLVSLVPVSGHLMLIYAIHGYCL 346
Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
K + S V AL ++ K + ++ESA K+FD+ EK+ W MI+ TQ G DA
Sbjct: 347 KSNFL-SHASVSTALTTVYSKLN-EIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDA 404
Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
I LF +M S F P+ T++ ++SAC++L + GK +H T + V +L+ M
Sbjct: 405 ISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGM 464
Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
YAKC GS+ ++R++FD M N ++W +I+GY G+ +EA+ +F +M+ + P
Sbjct: 465 YAKC---GSIAEARRLFDLMTKKNEVTWNTMISGY-GLHGQGQEALNIFYEMLNSGITPT 520
Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKA 445
TF VL AC + ++++ + R + V + ++ + R+G ++ A +
Sbjct: 521 PVTFLCVLYACSHAGLVKEGDEIFNSMIHR-YGFEPSVKHYACMVDILGRAGHLQRALQF 579
Query: 446 FESL-FEKNLVSYNTMVDA--YAKNLN-----SEKAFEL 476
E++ E + T++ A K+ N SEK FEL
Sbjct: 580 IEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFEL 618
Score = 168 bits (425), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 128/535 (23%), Positives = 257/535 (48%), Gaps = 33/535 (6%)
Query: 76 PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
P+ TY+ + + R+ G+++H + ++ ++++ +Y K + +A K+
Sbjct: 117 PNSSTYAFAISAASGFRDDRAGRVIHGQAVVDGCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYC-------FSAVIR 188
F M K D + W++MIS Y V++I +F +++ NE C ++
Sbjct: 177 FDRMPEK-DTILWNTMISGYRKNEMYVESIQVFRDLI------NESCTRLDTTTLLDILP 229
Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GSVDLESAYKVFDKMTEKN 247
A + + + +G I+ K G + D V I ++ K G + + SA +F + + +
Sbjct: 230 AVAELQELRLGMQIHSLATKTGCYSHDY-VLTGFISLYSKCGKIKMGSA--LFREFRKPD 286
Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
V + MI T G ++ LF +++LSG TL +V L L + +H
Sbjct: 287 IVAYNAMIHGYTSNGETELSLSLFKELMLSGARLRSSTLVSLVPVSGHLMLIYA---IHG 343
Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
+ +++ V +L +Y+K ++ +RK+FD + ++ SW A+I+GY Q+ G
Sbjct: 344 YCLKSNFLSHASVSTALTTVYSKL---NEIESARKLFDESPEKSLPSWNAMISGYTQN-G 399
Query: 368 RDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC--V 425
++A+ LF +M + + +PN T +L AC L ++ + V H + R + V
Sbjct: 400 LTEDAISLFREMQKSEFSPNPVTITCILSACAQLGALSLGKWV--HDLVRSTDFESSIYV 457
Query: 426 GNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGV 485
+LI MYA+ G + +AR+ F+ + +KN V++NTM+ Y + ++A + +E+ ++G+
Sbjct: 458 STALIGMYAKCGSIAEARRLFDLMTKKNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGI 517
Query: 486 GTSAYTFASLLSGASSIGAIGKGEQIHARII-KSGFESNHCIYNALISMYSRCANVEAAF 544
+ TF +L S G + +G++I +I + GFE + Y ++ + R +++ A
Sbjct: 518 TPTPVTFLCVLYACSHAGLVKEGDEIFNSMIHRYGFEPSVKHYACMVDILGRAGHLQRAL 577
Query: 545 QVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLS 598
Q + M + W +++ H A + K+ + P+ + Y +LS
Sbjct: 578 QFIEAMSIEPGSSVWETLLGACRIHKDTNLARTVSEKLFE--LDPDNVGYHVLLS 630
Score = 94.0 bits (232), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 66/237 (27%), Positives = 115/237 (48%), Gaps = 4/237 (1%)
Query: 24 SRQNLPPSSSPPFIAQPTTSEPLSNRLIY-HLNDGRVQKAIFTLDLMTQKGNHPDLDTYS 82
S+ N S+ F P S P N +I + +G + AI M + P+ T +
Sbjct: 365 SKLNEIESARKLFDESPEKSLPSWNAMISGYTQNGLTEDAISLFREMQKSEFSPNPVTIT 424
Query: 83 LLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK 142
+L +C + LGK VH L+ + E + + +LI +Y+KCG + EA ++F M K
Sbjct: 425 CILSACAQLGALSLGKWVHDLVRSTDFESSIYVSTALIGMYAKCGSIAEARRLFDLM-TK 483
Query: 143 RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHII 202
++ V+W++MIS Y G+ +A+++F EML G P F V+ ACS+ V G I
Sbjct: 484 KNEVTWNTMISGYGLHGQGQEALNIFYEMLNSGITPTPVTFLCVLYACSHAGLVKEGDEI 543
Query: 203 YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMT-EKNTVGWTLMITRC 258
+ ++ F+ V ++D+ + L+ A + + M+ E + W ++ C
Sbjct: 544 FNSMIHRYGFEPSVKHYACMVDILGRAG-HLQRALQFIEAMSIEPGSSVWETLLGAC 599
Score = 38.9 bits (89), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 47/201 (23%), Positives = 81/201 (40%), Gaps = 28/201 (13%)
Query: 481 EDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANV 540
E T S T+ ++SI + Q HA+II GF ++ + L S +
Sbjct: 12 ETTAALISKNTYLDFFKRSTSISHLA---QTHAQIILHGFRNDISLLTKLTQRLSDLGAI 68
Query: 541 EAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML-ADGIKPNGITYIAVLSA 599
A +F ++ +V + ++ GF+ + +L +F + + +KPN TY +SA
Sbjct: 69 YYARDIFLSVQRPDVFLFNVLMRGFSVNESPHSSLSVFAHLRKSTDLKPNSSTYAFAISA 128
Query: 600 CSHAGLISEGWKHFRSMYDEHG--IVQRMEHYACMVDLLGRSGSLTEALEFIR------- 650
S G++ R+ HG +V C +LL S + +F R
Sbjct: 129 AS-------GFRDDRAGRVIHGQAVVD-----GCDSELLLGSNIVKMYFKFWRVEDARKV 176
Query: 651 --SMPLSADVLVWRTFLGACR 669
MP D ++W T + R
Sbjct: 177 FDRMP-EKDTILWNTMISGYR 196
>sp|Q9M9E2|PPR45_ARATH Pentatricopeptide repeat-containing protein At1g15510,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H73 PE=2
SV=1
Length = 866
Score = 464 bits (1193), Expect = e-129, Method: Compositional matrix adjust.
Identities = 270/805 (33%), Positives = 453/805 (56%), Gaps = 11/805 (1%)
Query: 56 DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
+G++++A+ L+ M + D D + L++ C R G V+S+ S +
Sbjct: 72 NGKLEEAMKLLNSMQELRVAVDEDVFVALVRLCEWKRAQEEGSKVYSIALSSMSSLGVEL 131
Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
N+ ++++ + G+L +A +F M ++R++ SW+ ++ Y +G +A+ ++ ML +G
Sbjct: 132 GNAFLAMFVRFGNLVDAWYVFGKM-SERNLFSWNVLVGGYAKQGYFDEAMCLYHRMLWVG 190
Query: 176 FC-PNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
P+ Y F V+R C ++A G ++ +++ GY + D+ V ALI M+VK D++
Sbjct: 191 GVKPDVYTFPCVLRTCGGIPDLARGKEVHVHVVRYGY-ELDIDVVNALITMYVKCG-DVK 248
Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
SA +FD+M ++ + W MI+ + G + + LF M PD TL+ V+SAC
Sbjct: 249 SARLLFDRMPRRDIISWNAMISGYFENGMCHEGLELFFAMRGLSVDPDLMTLTSVISACE 308
Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
L G+ +H++ I TG A+D+ V SL MY GS ++ K+F RM +++S
Sbjct: 309 LLGDRRLGRDIHAYVITTGFAVDISVCNSLTQMYLNA---GSWREAEKLFSRMERKDIVS 365
Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHA 414
WT +I+GY + DK A+ + M Q V P+ T A+VL AC L D + +++ A
Sbjct: 366 WTTMISGYEYNFLPDK-AIDTYRMMDQDSVKPDEITVAAVLSACATLGDLDTGVELHKLA 424
Query: 415 VKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
+K V N+LI+MY++ ++ A F ++ KN++S+ +++ N +A
Sbjct: 425 IKARLISYVIVANNLINMYSKCKCIDKALDIFHNIPRKNVISWTSIIAGLRLNNRCFEAL 484
Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
L +++ T + +A T + L+ + IGA+ G++IHA ++++G + + NAL+ MY
Sbjct: 485 IFLRQMKMT-LQPNAITLTAALAACARIGALMCGKEIHAHVLRTGVGLDDFLPNALLDMY 543
Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
RC + A+ F + ++V SW ++TG+++ G + +E+F +M+ ++P+ IT+I
Sbjct: 544 VRCGRMNTAWSQFNS-QKKDVTSWNILLTGYSERGQGSMVVELFDRMVKSRVRPDEITFI 602
Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
++L CS + ++ +G +F M D +G+ ++HYAC+VDLLGR+G L EA +FI+ MP+
Sbjct: 603 SLLCGCSKSQMVRQGLMYFSKMED-YGVTPNLKHYACVVDLLGRAGELQEAHKFIQKMPV 661
Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
+ D VW L ACR+H +LG+ +A+ I E D + +ILL NLYA G W VA +
Sbjct: 662 TPDPAVWGALLNACRIHHKIDLGELSAQHIFELDKKSVGYYILLCNLYADCGKWREVAKV 721
Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
R+ MKE L +AGCSW+E KVH F + HP+T EI L+ K+ E G +
Sbjct: 722 RRMMKENGLTVDAGCSWVEVKGKVHAFLSDDKYHPQTKEINTVLEGFYEKMSEVGLTKIS 781
Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
+ E + + HSE+ A+AFGLI+T PI V KNL +C +CH +K+IS
Sbjct: 782 ESSSMDETEISRDEIFCGHSERKAIAFGLINTVPGMPIWVTKNLSMCENCHDTVKFISKT 841
Query: 835 TGREIVLRDSNRFHHIKDGKCSCND 859
REI +RD+ FHH KDG+CSC D
Sbjct: 842 VRREISVRDAEHFHHFKDGECSCGD 866
>sp|Q0WSH6|PP312_ARATH Pentatricopeptide repeat-containing protein At4g14850
OS=Arabidopsis thaliana GN=LOI1 PE=1 SV=1
Length = 684
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 249/642 (38%), Positives = 365/642 (56%), Gaps = 7/642 (1%)
Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
LI+M+ K ESA V +N V WT +I+ Q G A+ F +M G +P
Sbjct: 48 LINMYSKLD-HPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVP 106
Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
+ FT A + L L +GKQ+H+ A++ G LDV VGCS DMY K + DD+R
Sbjct: 107 NDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTRLR---DDAR 163
Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNL 401
K+FD + + N+ +W A I+ V + GR +EA++ F + + PN TF + L AC +
Sbjct: 164 KLFDEIPERNLETWNAFISNSV-TDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDW 222
Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMV 461
L N+ Q++ ++ G D V N LI Y + ++ + F + KN VS+ ++V
Sbjct: 223 LHLNLGMQLHGLVLRSGFDTDVSVCNGLIDFYGKCKQIRSSEIIFTEMGTKNAVSWCSLV 282
Query: 462 DAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFE 521
AY +N EKA L V TS + +S+LS + + + G IHA +K+ E
Sbjct: 283 AAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVE 342
Query: 522 SNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM 581
+ +AL+ MY +C +E + Q F EM ++N+++ S+I G+A G AL +F +M
Sbjct: 343 RTIFVGSALVDMYGKCGCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEM 402
Query: 582 LADGI--KPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
G PN +T++++LSACS AG + G K F SM +GI EHY+C+VD+LGR+
Sbjct: 403 APRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRA 462
Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
G + A EFI+ MP+ + VW ACR+HG +LG AAE + + DP+D H+LLS
Sbjct: 463 GMVERAYEFIKKMPIQPTISVWGALQNACRMHGKPQLGLLAAENLFKLDPKDSGNHVLLS 522
Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
N +A+AG W +R+ +K + K AG SWI N+VH F + SH EI L
Sbjct: 523 NTFAAAGRWAEANTVREELKGVGIKKGAGYSWITVKNQVHAFQAKDRSHILNKEIQTTLA 582
Query: 760 QLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLR 819
+L +++ GY PD L++LEEE+K + HSEK+A+AFGL+S S PIR+ KNLR
Sbjct: 583 KLRNEMEAAGYKPDLKLSLYDLEEEEKAAEVSHHSEKLALAFGLLSLPLSVPIRITKNLR 642
Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
+CGDCH+ K++S REI++RD+NRFH KDG CSC DYW
Sbjct: 643 ICGDCHSFFKFVSGSVKREIIVRDNNRFHRFKDGICSCKDYW 684
Score = 239 bits (611), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 155/496 (31%), Positives = 247/496 (49%), Gaps = 12/496 (2%)
Query: 79 DTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVIL-NSLISLYSKCGDLNEANKIFK 137
D LLLK+ I + + LG++VH+ + ++ P L N LI++YSK D E+ ++
Sbjct: 7 DALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKL-DHPESARLVL 65
Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
+ R++VSW+S+IS G A+ F EM G PN++ F +A ++
Sbjct: 66 RLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLPV 125
Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
G I+ +KCG DV VGC+ DM+ K + + A K+FD++ E+N W I+
Sbjct: 126 TGKQIHALAVKCGRI-LDVFVGCSAFDMYCKTRLR-DDARKLFDEIPERNLETWNAFISN 183
Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
G PR+AI F++ P+ T ++ACS+ G QLH +R+G D
Sbjct: 184 SVTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTD 243
Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
V V L+D Y KC + S +F M N +SW +++ YVQ+ D++A L+
Sbjct: 244 VSVCNGLIDFYGKCK---QIRSSEIIFTEMGTKNAVSWCSLVAAYVQN-HEDEKASVLYL 299
Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
+ V + F +SVL AC + + ++ HAVK VG++L+ MY + G
Sbjct: 300 RSRKDIVETSDFMISSVLSACAGMAGLELGRSIHAHAVKACVERTIFVGSALVDMYGKCG 359
Query: 438 RMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSA--YTFASL 495
+ED+ +AF+ + EKNLV+ N+++ YA + A L E+ G G + TF SL
Sbjct: 360 CIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSL 419
Query: 496 LSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
LS S GA+ G +I + + G E Y+ ++ M R VE A++ K+M +
Sbjct: 420 LSACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCIVDMLGRAGMVERAYEFIKKMPIQP 479
Query: 555 VIS-WTSMITGFAKHG 569
IS W ++ HG
Sbjct: 480 TISVWGALQNACRMHG 495
Score = 152 bits (383), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 121/442 (27%), Positives = 203/442 (45%), Gaps = 41/442 (9%)
Query: 31 SSSPPFIAQ------PTTSEPLSNRLIYHLNDGR------------VQKAIFTLDL---- 68
S PPF+A P S RL+ L R Q F+ L
Sbjct: 38 SPPPPFLANYLINMYSKLDHPESARLVLRLTPARNVVSWTSLISGLAQNGHFSTALVEFF 97
Query: 69 -MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
M ++G P+ T+ K+ R GK +H+L + + + S +Y K
Sbjct: 98 EMRREGVVPNDFTFPCAFKAVASLRLPVTGKQIHALAVKCGRILDVFVGCSAFDMYCKTR 157
Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVI 187
++A K+F + +R++ +W++ IS+ V G+ +AI F+E + PN F A +
Sbjct: 158 LRDDARKLFDEI-PERNLETWNAFISNSVTDGRPREAIEAFIEFRRIDGHPNSITFCAFL 216
Query: 188 RACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKN 247
ACS+ ++ +G ++G +L+ G FD+DV V LID + K + S+ +F +M KN
Sbjct: 217 NACSDWLHLNLGMQLHGLVLRSG-FDTDVSVCNGLIDFYGKCK-QIRSSEIIFTEMGTKN 274
Query: 248 TVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHS 307
V W ++ Q A L+L F +S V+SAC+ + G+ +H+
Sbjct: 275 AVSWCSLVAAYVQNHEDEKASVLYLRSRKDIVETSDFMISSVLSACAGMAGLELGRSIHA 334
Query: 308 WAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGG 367
A++ + + VG +LVDMY KC G ++DS + FD M + N+++ ++I GY G
Sbjct: 335 HAVKACVERTIFVGSALVDMYGKC---GCIEDSEQAFDEMPEKNLVTRNSLIGGYAHQGQ 391
Query: 368 RDKEAVKLFSDMIQGQVA--PNHFTFASVLKACGNLLDSNVAEQVY-----THAVKRGRA 420
D A+ LF +M PN+ TF S+L AC +++ T+ ++ G
Sbjct: 392 VDM-ALALFEEMAPRGCGPTPNYMTFVSLLSACSRAGAVENGMKIFDSMRSTYGIEPGAE 450
Query: 421 LDDCVGNSLISMYARSGRMEDA 442
C+ + M R+G +E A
Sbjct: 451 HYSCI----VDMLGRAGMVERA 468
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 93/377 (24%), Positives = 170/377 (45%), Gaps = 24/377 (6%)
Query: 54 LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
+ DGR ++AI + HP+ T+ L +C + +LG +H L+ RS + +
Sbjct: 185 VTDGRPREAIEAFIEFRRIDGHPNSITFCAFLNACSDWLHLNLGMQLHGLVLRSGFDTDV 244
Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
+ N LI Y KC + + IF MG K + VSW S++++YV + A +++ +
Sbjct: 245 SVCNGLIDFYGKCKQIRSSEIIFTEMGTK-NAVSWCSLVAAYVQNHEDEKASVLYLRSRK 303
Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDL 233
+++ S+V+ AC+ + +G I+ +K + + VG AL+DM+ K +
Sbjct: 304 DIVETSDFMISSVLSACAGMAGLELGRSIHAHAVK-ACVERTIFVGSALVDMYGKCGC-I 361
Query: 234 ESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF--LPDRFTLSGVVS 291
E + + FD+M EKN V +I G A+ LF +M G P+ T ++S
Sbjct: 362 EDSEQAFDEMPEKNLVTRNSLIGGYAHQGQVDMALALFEEMAPRGCGPTPNYMTFVSLLS 421
Query: 292 ACSELELFTSGKQL-----HSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDR 346
ACS +G ++ ++ I G C+ VDM + G V+ + + +
Sbjct: 422 ACSRAGAVENGMKIFDSMRSTYGIEPGAEHYSCI----VDMLGRA---GMVERAYEFIKK 474
Query: 347 MLDHNVMSWTAIITGYVQSGGRDK----EAVKLFSDMIQGQVAPNHFTFASVLKACGNLL 402
M +S + + G+ + A LF + + + NH ++ A G
Sbjct: 475 MPIQPTISVWGALQNACRMHGKPQLGLLAAENLFK--LDPKDSGNHVLLSNTFAAAGRWA 532
Query: 403 DSN-VAEQVYTHAVKRG 418
++N V E++ +K+G
Sbjct: 533 EANTVREELKGVGIKKG 549
Score = 69.3 bits (168), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 66/123 (53%), Gaps = 1/123 (0%)
Query: 488 SAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQV 546
SA LL A S ++ G +HARI+K+ + N LI+MYS+ + E+A V
Sbjct: 5 SADALGLLLKNAISASSMRLGRVVHARIVKTLDSPPPPFLANYLINMYSKLDHPESARLV 64
Query: 547 FKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLI 606
+ RNV+SWTS+I+G A++G + AL F++M +G+ PN T+ A + L
Sbjct: 65 LRLTPARNVVSWTSLISGLAQNGHFSTALVEFFEMRREGVVPNDFTFPCAFKAVASLRLP 124
Query: 607 SEG 609
G
Sbjct: 125 VTG 127
>sp|Q9FFN1|PP363_ARATH Pentatricopeptide repeat-containing protein At5g03800
OS=Arabidopsis thaliana GN=EMB175 PE=2 SV=1
Length = 896
Score = 463 bits (1191), Expect = e-129, Method: Compositional matrix adjust.
Identities = 273/822 (33%), Positives = 456/822 (55%), Gaps = 43/822 (5%)
Query: 78 LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
+D + LL+ + + + K VH+ + + E + + N+LIS Y K G EA +F
Sbjct: 80 IDGFFYLLRLSAQYHDVEVTKAVHASFLKLR-EEKTRLGNALISTYLKLGFPREAILVFV 138
Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENV 196
S+ + +VS++++IS + +++A+ +F M + G PNEY F A++ AC
Sbjct: 139 SLSSP-TVVSYTALISGFSRLNLEIEALKVFFRMRKAGLVQPNEYTFVAILTACVRVSRF 197
Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS-VDLESAYKVFDKMTEKNTVGWTLMI 255
++G I+G ++K G+ +S V V +L+ ++ K S + K+FD++ +++ W ++
Sbjct: 198 SLGIQIHGLIVKSGFLNS-VFVSNSLMSLYDKDSGSSCDDVLKLFDEIPQRDVASWNTVV 256
Query: 256 TRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
+ + G A LF +M + GF D FTLS ++S+C++ + G++LH AIR GL
Sbjct: 257 SSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCTDSSVLLRGRELHGRAIRIGL 316
Query: 315 ALDVCVGCSLVDMYAKC----TVD------------------------GSVDDSRKVFDR 346
++ V +L+ Y+K V+ G VD + ++F
Sbjct: 317 MQELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFTEMITAYMSFGMVDSAVEIFAN 376
Query: 347 MLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNV 406
+ + N +++ A++ G+ ++G K A+KLF+DM+Q V F+ S + ACG + + V
Sbjct: 377 VTEKNTITYNALMAGFCRNGHGLK-ALKLFTDMLQRGVELTDFSLTSAVDACGLVSEKKV 435
Query: 407 AEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS---YNTMVDA 463
+EQ++ +K G A + C+ +L+ M R RM DA + F+ + NL S +++
Sbjct: 436 SEQIHGFCIKFGTAFNPCIQTALLDMCTRCERMADAEEMFDQ-WPSNLDSSKATTSIIGG 494
Query: 464 YAKNLNSEKAFELLHE-IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFES 522
YA+N +KA L H + + + + +L+ ++G G QIH +K+G+ S
Sbjct: 495 YARNGLPDKAVSLFHRTLCEQKLFLDEVSLTLILAVCGTLGFREMGYQIHCYALKAGYFS 554
Query: 523 NHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKML 582
+ + N+LISMY++C + + A ++F M + +VISW S+I+ + AL ++ +M
Sbjct: 555 DISLGNSLISMYAKCCDSDDAIKIFNTMREHDVISWNSLISCYILQRNGDEALALWSRMN 614
Query: 583 ADGIKPNGITYIAVLSAC--SHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSG 640
IKP+ IT V+SA + + +S F SM + I EHY V +LG G
Sbjct: 615 EKEIKPDIITLTLVISAFRYTESNKLSSCRDLFLSMKTIYDIEPTTEHYTAFVRVLGHWG 674
Query: 641 SLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN 700
L EA + I SMP+ +V V R L +CR+H +T + K A++IL P+ P+ +IL SN
Sbjct: 675 LLEEAEDTINSMPVQPEVSVLRALLDSCRIHSNTSVAKRVAKLILSTKPETPSEYILKSN 734
Query: 701 LYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQ 760
+Y+++G W IR+ M+ER K SWI +NK+H FH +TSHP+ +IY L+
Sbjct: 735 IYSASGFWHRSEMIREEMRERGYRKHPAKSWIIHENKIHSFHARDTSHPQEKDIYRGLEI 794
Query: 761 LALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIST-SKSKPIRVFKNLR 819
L ++ + GY P+T +VL E++E K +LF HS K+AV +G++S+ ++ KP+RV KN+
Sbjct: 795 LIMECLKVGYEPNTEYVLQEVDEFMKKSFLFHHSAKLAVTYGILSSNTRGKPVRVMKNVM 854
Query: 820 VCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
+CGDCH KYIS+V REIVLRDS+ FHH +GKCSC D W
Sbjct: 855 LCGDCHEFFKYISVVVKREIVLRDSSGFHHFVNGKCSCRDLW 896
Score = 172 bits (436), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 126/463 (27%), Positives = 229/463 (49%), Gaps = 48/463 (10%)
Query: 75 HPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSK--CGDLNEA 132
P+ T+ +L +C+R F LG +H L+ +S + + NSL+SLY K ++
Sbjct: 178 QPNEYTFVAILTACVRVSRFSLGIQIHGLIVKSGFLNSVFVSNSLMSLYDKDSGSSCDDV 237
Query: 133 NKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAVIRACS 191
K+F + +RD+ SW++++SS V GK A +F EM + GF + + S ++ +C+
Sbjct: 238 LKLFDEIP-QRDVASWNTVVSSLVKEGKSHKAFDLFYEMNRVEGFGVDSFTLSTLLSSCT 296
Query: 192 NTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK----------------------- 228
++ + G ++G ++ G ++ V ALI + K
Sbjct: 297 DSSVLLRGRELHGRAIRIGLMQ-ELSVNNALIGFYSKFWDMKKVESLYEMMMAQDAVTFT 355
Query: 229 ---------GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF 279
G VD SA ++F +TEKNT+ + ++ + G A++LF DM+ G
Sbjct: 356 EMITAYMSFGMVD--SAVEIFANVTEKNTITYNALMAGFCRNGHGLKALKLFTDMLQRGV 413
Query: 280 LPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDD 339
F+L+ V AC + +Q+H + I+ G A + C+ +L+DM +C + D
Sbjct: 414 ELTDFSLTSAVDACGLVSEKKVSEQIHGFCIKFGTAFNPCIQTALLDMCTRCE---RMAD 470
Query: 340 SRKVFDRM---LDHNVMSWTAIITGYVQSGGRDKEAVKLF-SDMIQGQVAPNHFTFASVL 395
+ ++FD+ LD + + T+II GY ++G DK AV LF + + ++ + + +L
Sbjct: 471 AEEMFDQWPSNLDSSKAT-TSIIGGYARNGLPDK-AVSLFHRTLCEQKLFLDEVSLTLIL 528
Query: 396 KACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLV 455
CG L + Q++ +A+K G D +GNSLISMYA+ +DA K F ++ E +++
Sbjct: 529 AVCGTLGFREMGYQIHCYALKAGYFSDISLGNSLISMYAKCCDSDDAIKIFNTMREHDVI 588
Query: 456 SYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSG 498
S+N+++ Y N ++A L + + + T ++S
Sbjct: 589 SWNSLISCYILQRNGDEALALWSRMNEKEIKPDIITLTLVISA 631
>sp|Q9LN01|PPR21_ARATH Pentatricopeptide repeat-containing protein At1g08070
OS=Arabidopsis thaliana GN=PCMP-H12 PE=2 SV=1
Length = 741
Score = 461 bits (1187), Expect = e-128, Method: Compositional matrix adjust.
Identities = 246/661 (37%), Positives = 382/661 (57%), Gaps = 35/661 (5%)
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
L A VF + E N + W M P A++L++ MI G LP+ +T V+ +
Sbjct: 84 LPYAISVFKTIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKS 143
Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
C++ + F G+Q+H ++ G LD+ V SL+ MY + +G ++D+ KVFD+ +V
Sbjct: 144 CAKSKAFKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQ---NGRLEDAHKVFDKSPHRDV 200
Query: 353 MSWTAIITGYVQSG------------------------------GRDKEAVKLFSDMIQG 382
+S+TA+I GY G G KEA++LF DM++
Sbjct: 201 VSYTALIKGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKT 260
Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
V P+ T +V+ AC + QV+ G + + N+LI +Y++ G +E A
Sbjct: 261 NVRPDESTMVTVVSACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETA 320
Query: 443 RKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSI 502
FE L K+++S+NT++ Y ++A L E+ +G + T S+L + +
Sbjct: 321 CGLFERLPYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHL 380
Query: 503 GAIGKGEQIHARIIK--SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTS 560
GAI G IH I K G + + +LI MY++C ++EAA QVF + +++ SW +
Sbjct: 381 GAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNA 440
Query: 561 MITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEH 620
MI GFA HG A + ++F +M GI+P+ IT++ +LSACSH+G++ G FR+M ++
Sbjct: 441 MIFGFAMHGRADASFDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDY 500
Query: 621 GIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHA 680
+ ++EHY CM+DLLG SG EA E I M + D ++W + L AC++HG+ ELG+
Sbjct: 501 KMTPKLEHYGCMIDLLGHSGLFKEAEEMINMMEMEPDGVIWCSLLKACKMHGNVELGESF 560
Query: 681 AEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHK 740
AE +++ +P++P +++LLSN+YASAG W VA R + ++ + K GCS IE D+ VH+
Sbjct: 561 AENLIKIEPENPGSYVLLSNIYASAGRWNEVAKTRALLNDKGMKKVPGCSSIEIDSVVHE 620
Query: 741 FHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVA 800
F +G+ HP+ EIY L+++ + +++ G++PDT+ VL E+EEE K L HSEK+A+A
Sbjct: 621 FIIGDKFHPRNREIYGMLEEMEVLLEKAGFVPDTSEVLQEMEEEWKEGALRHHSEKLAIA 680
Query: 801 FGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDY 860
FGLIST + + KNLRVC +CH A K IS + REI+ RD RFHH +DG CSCNDY
Sbjct: 681 FGLISTKPGTKLTIVKNLRVCRNCHEATKLISKIYKREIIARDRTRFHHFRDGVCSCNDY 740
Query: 861 W 861
W
Sbjct: 741 W 741
Score = 202 bits (514), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 142/517 (27%), Positives = 250/517 (48%), Gaps = 70/517 (13%)
Query: 30 PSSSPPFIAQPTTSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCI 89
PSSS PF P++S+P + + NHP L LL +C
Sbjct: 11 PSSSYPFHFLPSSSDPPYDSI----------------------RNHPSLS----LLHNC- 43
Query: 90 RSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS---LYSKCGDLNEANKIFKSMGNKRDIV 146
+ +++H+ + + L + L+ LI L L A +FK++ + +++
Sbjct: 44 --KTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFKTI-QEPNLL 100
Query: 147 SWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFL 206
W++M + V A+ ++V M+ LG PN Y F V+++C+ ++ G I+G +
Sbjct: 101 IWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCAKSKAFKEGQQIHGHV 160
Query: 207 LKCGYFDSDVCVGCALIDMFVK-GSVD-----------------------------LESA 236
LK G D D+ V +LI M+V+ G ++ +E+A
Sbjct: 161 LKLG-CDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRDVVSYTALIKGYASRGYIENA 219
Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
K+FD++ K+ V W MI+ + G ++A+ LF DM+ + PD T+ VVSAC++
Sbjct: 220 QKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTMVTVVSACAQS 279
Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
G+Q+H W G ++ + +L+D+Y+KC G ++ + +F+R+ +V+SW
Sbjct: 280 GSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKC---GELETACGLFERLPYKDVISWN 336
Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
+I GY KEA+ LF +M++ PN T S+L AC +L ++ ++ + K
Sbjct: 337 TLIGGYTHM-NLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYIDK 395
Query: 417 RGRALDDC--VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAF 474
R + + + + SLI MYA+ G +E A + F S+ K+L S+N M+ +A + ++ +F
Sbjct: 396 RLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADASF 455
Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQI 511
+L + G+ TF LLS S G + G I
Sbjct: 456 DLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHI 492
>sp|Q9SI53|PP147_ARATH Pentatricopeptide repeat-containing protein At2g03880,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H44 PE=2
SV=1
Length = 630
Score = 460 bits (1184), Expect = e-128, Method: Compositional matrix adjust.
Identities = 232/613 (37%), Positives = 370/613 (60%), Gaps = 12/613 (1%)
Query: 252 TLMITRCTQLGCPRDAIRLF--LDMILS-GFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
TL+++ T+L RD R +D + S G D T S ++ C G +
Sbjct: 27 TLLLSEFTRLCYQRDLPRAMKAMDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRH 86
Query: 309 AIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGR 368
G + + L++MY K + ++D+ ++FD+M NV+SWT +I+ Y +
Sbjct: 87 LYFNGHRPMMFLVNVLINMYVKFNL---LNDAHQLFDQMPQRNVISWTTMISAYSKCKIH 143
Query: 369 DKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS 428
K A++L M++ V PN +T++SVL++C + D ++ +K G D V ++
Sbjct: 144 QK-ALELLVLMLRDNVRPNVYTYSSVLRSCNGMSD---VRMLHCGIIKEGLESDVFVRSA 199
Query: 429 LISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTS 488
LI ++A+ G EDA F+ + + + +N+++ +A+N S+ A EL ++ G
Sbjct: 200 LIDVFAKLGEPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAE 259
Query: 489 AYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFK 548
T S+L + + + G Q H I+K ++ + + NAL+ MY +C ++E A +VF
Sbjct: 260 QATLTSVLRACTGLALLELGMQAHVHIVK--YDQDLILNNALVDMYCKCGSLEDALRVFN 317
Query: 549 EMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISE 608
+M++R+VI+W++MI+G A++G++ AL++F +M + G KPN IT + VL ACSHAGL+ +
Sbjct: 318 QMKERDVITWSTMISGLAQNGYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGLLED 377
Query: 609 GWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGAC 668
GW +FRSM +GI EHY CM+DLLG++G L +A++ + M D + WRT LGAC
Sbjct: 378 GWYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWRTLLGAC 437
Query: 669 RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAG 728
RV + L ++AA+ ++ DP+D + LLSN+YA++ W+ V IR RM++R + KE G
Sbjct: 438 RVQRNMVLAEYAAKKVIALDPEDAGTYTLLSNIYANSQKWDSVEEIRTRMRDRGIKKEPG 497
Query: 729 CSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQ 788
CSWIE + ++H F +G+ SHP+ +E+ +L+QL ++ GY+P+TNFVL +LE EQ
Sbjct: 498 CSWIEVNKQIHAFIIGDNSHPQIVEVSKKLNQLIHRLTGIGYVPETNFVLQDLEGEQMED 557
Query: 789 YLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFH 848
L HSEK+A+AFGL++ K IR+ KNLR+CGDCH K S + R IV+RD R+H
Sbjct: 558 SLRHHSEKLALAFGLMTLPIEKVIRIRKNLRICGDCHVFCKLASKLEIRSIVIRDPIRYH 617
Query: 849 HIKDGKCSCNDYW 861
H +DGKCSC DYW
Sbjct: 618 HFQDGKCSCGDYW 630
Score = 190 bits (482), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 136/425 (32%), Positives = 224/425 (52%), Gaps = 31/425 (7%)
Query: 48 NRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRS 107
RL Y + R KA +D + G D TYS L+K CI +R H G L+ L +
Sbjct: 34 TRLCYQRDLPRAMKA---MDSLQSHGLWADSATYSELIKCCISNRAVHEGNLICRHLYFN 90
Query: 108 KLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHM 167
P ++N LI++Y K LN+A+++F M +R+++SW++MIS+Y A+ +
Sbjct: 91 GHRPMMFLVNVLINMYVKFNLLNDAHQLFDQMP-QRNVISWTTMISAYSKCKIHQKALEL 149
Query: 168 FVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY----FDSDVCVGCALI 223
V ML PN Y +S+V+R+C+ +V + H CG +SDV V ALI
Sbjct: 150 LVLMLRDNVRPNVYTYSSVLRSCNGMSDVRMLH--------CGIIKEGLESDVFVRSALI 201
Query: 224 DMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDR 283
D+F K + E A VFD+M + + W +I Q A+ LF M +GF+ ++
Sbjct: 202 DVFAKLG-EPEDALSVFDEMVTGDAIVWNSIIGGFAQNSRSDVALELFKRMKRAGFIAEQ 260
Query: 284 FTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKV 343
TL+ V+ AC+ L L G Q H ++ D+ + +LVDMY KC GS++D+ +V
Sbjct: 261 ATLTSVLRACTGLALLELGMQAHVHIVKYD--QDLILNNALVDMYCKC---GSLEDALRV 315
Query: 344 FDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN--L 401
F++M + +V++W+ +I+G Q+ G +EA+KLF M PN+ T VL AC + L
Sbjct: 316 FNQMKERDVITWSTMISGLAQN-GYSQEALKLFERMKSSGTKPNYITIVGVLFACSHAGL 374
Query: 402 LDSNVAEQVYTHAVKRGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYN 458
L+ Y ++K+ +D + +I + ++G+++DA K + E + V++
Sbjct: 375 LEDG---WYYFRSMKKLYGIDPVREHYGCMIDLLGKAGKLDDAVKLLNEMECEPDAVTWR 431
Query: 459 TMVDA 463
T++ A
Sbjct: 432 TLLGA 436
>sp|Q9LNU6|PPR53_ARATH Pentatricopeptide repeat-containing protein At1g20230
OS=Arabidopsis thaliana GN=PCMP-H21 PE=2 SV=2
Length = 760
Score = 460 bits (1183), Expect = e-128, Method: Compositional matrix adjust.
Identities = 236/693 (34%), Positives = 376/693 (54%), Gaps = 74/693 (10%)
Query: 239 VFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELEL 298
V + + ++ +I T+ +I +F M G +PD L + C+EL
Sbjct: 72 VLQSIPDPTIYSFSSLIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSA 131
Query: 299 FTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-------- 350
F GKQ+H + +GL +D V S+ MY +C G + D+RKVFDRM D
Sbjct: 132 FKVGKQIHCVSCVSGLDMDAFVQGSMFHMYMRC---GRMGDARKVFDRMSDKDVVTCSAL 188
Query: 351 ---------------------------NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
N++SW I++G+ +SG KEAV +F +
Sbjct: 189 LCAYARKGCLEEVVRILSEMESSGIEANIVSWNGILSGFNRSG-YHKEAVVMFQKIHHLG 247
Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRM---- 439
P+ T +SVL + G+ N+ ++ + +K+G D CV +++I MY +SG +
Sbjct: 248 FCPDQVTVSSVLPSVGDSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGII 307
Query: 440 ---------------------------EDARKAFE----SLFEKNLVSYNTMVDAYAKNL 468
+ A + FE E N+VS+ +++ A+N
Sbjct: 308 SLFNQFEMMEAGVCNAYITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNG 367
Query: 469 NSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYN 528
+A EL E++ GV + T S+L +I A+G G H ++ N + +
Sbjct: 368 KDIEALELFREMQVAGVKPNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGS 427
Query: 529 ALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
ALI MY++C + + VF M +N++ W S++ GF+ HG A + IF ++ +KP
Sbjct: 428 ALIDMYAKCGRINLSQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKP 487
Query: 589 NGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEF 648
+ I++ ++LSAC GL EGWK+F+ M +E+GI R+EHY+CMV+LLGR+G L EA +
Sbjct: 488 DFISFTSLLSACGQVGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDL 547
Query: 649 IRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHW 708
I+ MP D VW L +CR+ + +L + AAE + +P++P ++LLSN+YA+ G W
Sbjct: 548 IKEMPFEPDSCVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGTYVLLSNIYAAKGMW 607
Query: 709 EYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEF 768
V +IR +M+ L K GCSWI+ N+V+ G+ SHP+ +I ++D+++ ++++
Sbjct: 608 TEVDSIRNKMESLGLKKNPGCSWIQVKNRVYTLLAGDKSHPQIDQITEKMDEISKEMRKS 667
Query: 769 GYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAI 828
G+ P+ +F LH++EE+++ Q L+ HSEK+AV FGL++T P++V KNLR+CGDCH I
Sbjct: 668 GHRPNLDFALHDVEEQEQEQMLWGHSEKLAVVFGLLNTPDGTPLQVIKNLRICGDCHAVI 727
Query: 829 KYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
K+IS GREI +RD+NRFHH KDG CSC D+W
Sbjct: 728 KFISSYAGREIFIRDTNRFHHFKDGICSCGDFW 760
Score = 176 bits (446), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 128/516 (24%), Positives = 241/516 (46%), Gaps = 87/516 (16%)
Query: 50 LIYHLNDGRV-QKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
LIY L ++ ++I M G PD L K C F +GK +H + S
Sbjct: 87 LIYALTKAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSG 146
Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNK-------------------------- 142
L+ ++ + S+ +Y +CG + +A K+F M +K
Sbjct: 147 LDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILS 206
Query: 143 --------RDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTE 194
+IVSW+ ++S + G +A+ MF ++ LGFCP++ S+V+ + ++E
Sbjct: 207 EMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSE 266
Query: 195 NVAIGHIIYGFLLKCGYFDSDVCVGCALIDMF-----VKGSVDL---------------- 233
+ +G +I+G+++K G D CV A+IDM+ V G + L
Sbjct: 267 MLNMGRLIHGYVIKQGLL-KDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYI 325
Query: 234 ---------ESAYKVFDKMTEK----NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFL 280
+ A ++F+ E+ N V WT +I C Q G +A+ LF +M ++G
Sbjct: 326 TGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVK 385
Query: 281 PDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDS 340
P+ T+ ++ AC + G+ H +A+R L +V VG +L+DMYAKC G ++ S
Sbjct: 386 PNHVTIPSMLPACGNIAALGHGRSTHGFAVRVHLLDNVHVGSALIDMYAKC---GRINLS 442
Query: 341 RKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGN 400
+ VF+ M N++ W +++ G+ G+ KE + +F +++ ++ P+ +F S+L ACG
Sbjct: 443 QIVFNMMPTKNLVCWNSLMNGFSMH-GKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 401 LLDSNVAEQVYT-----HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNL 454
+ ++ + + + +K C ++++ R+G++++A + + FE +
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSC----MVNLLGRAGKLQEAYDLIKEMPFEPDS 557
Query: 455 VSYNTMVDAYAKNLN---SEKAFELLHEIEDTGVGT 487
+ ++++ N +E A E L +E GT
Sbjct: 558 CVWGALLNSCRLQNNVDLAEIAAEKLFHLEPENPGT 593
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 133/530 (25%), Positives = 242/530 (45%), Gaps = 96/530 (18%)
Query: 101 HSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGK 160
H+ + +S + + I LI+ YS N+A+ + +S+ + I S+SS+I +
Sbjct: 38 HARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDP-TIYSFSSLIYALTKAKL 96
Query: 161 QVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGC 220
+I +F M G P+ + + + C+ +G I+ CV C
Sbjct: 97 FTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIH-------------CVSC 143
Query: 221 AL---IDMFVKGSV--------DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIR 269
+D FV+GS+ + A KVFD+M++K+ V + ++ + GC + +R
Sbjct: 144 VSGLDMDAFVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVR 203
Query: 270 LFLDM--------------ILS---------------------GFLPDRFTLSGVVSACS 294
+ +M ILS GF PD+ T+S V+ +
Sbjct: 204 ILSEMESSGIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVG 263
Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK---------------------CTV 333
+ E+ G+ +H + I+ GL D CV +++DMY K C
Sbjct: 264 DSEMLNMGRLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNA 323
Query: 334 -------DGSVDDSRKVF----DRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQG 382
+G VD + ++F ++ ++ NV+SWT+II G Q+ G+D EA++LF +M
Sbjct: 324 YITGLSRNGLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQN-GKDIEALELFREMQVA 382
Query: 383 QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDC-VGNSLISMYARSGRMED 441
V PNH T S+L ACGN+ + AV R LD+ VG++LI MYA+ GR+
Sbjct: 383 GVKPNHVTIPSMLPACGNIAALGHGRSTHGFAV-RVHLLDNVHVGSALIDMYAKCGRINL 441
Query: 442 ARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
++ F + KNLV +N++++ ++ + +++ + + T + +F SLLS
Sbjct: 442 SQIVFNMMPTKNLVCWNSLMNGFSMHGKAKEVMSIFESLMRTRLKPDFISFTSLLSACGQ 501
Query: 502 IGAIGKGEQIHARIIKS-GFESNHCIYNALISMYSRCANVEAAFQVFKEM 550
+G +G + + + G + Y+ ++++ R ++ A+ + KEM
Sbjct: 502 VGLTDEGWKYFKMMSEEYGIKPRLEHYSCMVNLLGRAGKLQEAYDLIKEM 551
Score = 130 bits (326), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 104/448 (23%), Positives = 196/448 (43%), Gaps = 88/448 (19%)
Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
Q H+ +++G D + L+ Y+ +D+ V + D + S++++I
Sbjct: 36 QAHARILKSGAQNDGYISAKLIASYSNYNC---FNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
++ +++ +FS M + P+ ++ K C L V +Q++ + G +D
Sbjct: 93 KAK-LFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCAELSAFKVGKQIHCVSCVSGLDMDA 151
Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
V S+ MY R GRM DARK F+ + +K++V+ + ++ AYA+ E+ +L E+E +
Sbjct: 152 FVQGSMFHMYMRCGRMGDARKVFDRMSDKDVVTCSALLCAYARKGCLEEVVRILSEMESS 211
Query: 484 GVGTSAYTFASLLSG-----------------------------ASSIGAIGKGEQ---- 510
G+ + ++ +LSG +S + ++G E
Sbjct: 212 GIEANIVSWNGILSGFNRSGYHKEAVVMFQKIHHLGFCPDQVTVSSVLPSVGDSEMLNMG 271
Query: 511 --IHARIIKSGFESNHCIYNALISMYSRCANV-------------EAA------------ 543
IH +IK G + C+ +A+I MY + +V EA
Sbjct: 272 RLIHGYVIKQGLLKDKCVISAMIDMYGKSGHVYGIISLFNQFEMMEAGVCNAYITGLSRN 331
Query: 544 ---------FQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITY 593
F++FKE + NV+SWTS+I G A++G ALE+F +M G+KPN +T
Sbjct: 332 GLVDKALEMFELFKEQTMELNVVSWTSIIAGCAQNGKDIEALELFREMQVAGVKPNHVTI 391
Query: 594 IAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHY------ACMVDLLGRSGSLTEALE 647
++L AC + + G RS HG R+ + ++D+ + G + +
Sbjct: 392 PSMLPACGNIAALGHG----RS---THGFAVRVHLLDNVHVGSALIDMYAKCGRINLSQI 444
Query: 648 FIRSMPLSADVLVWRTFLGACRVHGDTE 675
MP + +++ W + + +HG +
Sbjct: 445 VFNMMP-TKNLVCWNSLMNGFSMHGKAK 471
Score = 46.2 bits (108), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 47/95 (49%)
Query: 507 KGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFA 566
K Q HARI+KSG +++ I LI+ YS A V + + D + S++S+I
Sbjct: 33 KTTQAHARILKSGAQNDGYISAKLIASYSNYNCFNDADLVLQSIPDPTIYSFSSLIYALT 92
Query: 567 KHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
K +++ +F +M + G+ P+ + C+
Sbjct: 93 KAKLFTQSIGVFSRMFSHGLIPDSHVLPNLFKVCA 127
>sp|O23337|PP311_ARATH Pentatricopeptide repeat-containing protein At4g14820
OS=Arabidopsis thaliana GN=PCMP-H3 PE=2 SV=1
Length = 722
Score = 456 bits (1174), Expect = e-127, Method: Compositional matrix adjust.
Identities = 236/635 (37%), Positives = 367/635 (57%), Gaps = 41/635 (6%)
Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
PR I + + G D+F+ ++ A S++ G +LH A + D V
Sbjct: 92 PRATILFYQRIRHVGGRLDQFSFLPILKAVSKVSALFEGMELHGVAFKIATLCDPFVETG 151
Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
+DMYA C G ++ +R VFD M +V++W +I Y + G D EA KLF +M
Sbjct: 152 FMDMYASC---GRINYARNVFDEMSHRDVVTWNTMIERYCRFGLVD-EAFKLFEEMKDSN 207
Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYA--------- 434
V P+ +++ ACG + +Y ++ +D + +L++MYA
Sbjct: 208 VMPDEMILCNIVSACGRTGNMRYNRAIYEFLIENDVRMDTHLLTALVTMYAGAGCMDMAR 267
Query: 435 ----------------------RSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEK 472
+ GR++DA+ F+ +K+LV + TM+ AY ++ ++
Sbjct: 268 EFFRKMSVRNLFVSTAMVSGYSKCGRLDDAQVIFDQTEKKDLVCWTTMISAYVESDYPQE 327
Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
A + E+ +G+ + S++S +++G + K + +H+ I +G ES I NALI+
Sbjct: 328 ALRVFEEMCCSGIKPDVVSMFSVISACANLGILDKAKWVHSCIHVNGLESELSINNALIN 387
Query: 533 MYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGIT 592
MY++C ++A VF++M RNV+SW+SMI + HG A+ AL +F +M + ++PN +T
Sbjct: 388 MYAKCGGLDATRDVFEKMPRRNVVSWSSMINALSMHGEASDALSLFARMKQENVEPNEVT 447
Query: 593 YIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
++ VL CSH+GL+ EG K F SM DE+ I ++EHY CMVDL GR+ L EALE I SM
Sbjct: 448 FVGVLYGCSHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLLREALEVIESM 507
Query: 653 PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVA 712
P++++V++W + + ACR+HG+ ELGK AA+ ILE +P A +L+SN+YA WE V
Sbjct: 508 PVASNVVIWGSLMSACRIHGELELGKFAAKRILELEPDHDGALVLMSNIYAREQRWEDVR 567
Query: 713 NIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLP 772
NIR+ M+E+N+ KE G S I+ + K H+F +G+ H ++ EIYA+LD++ K+K GY+P
Sbjct: 568 NIRRVMEEKNVFKEKGLSRIDQNGKSHEFLIGDKRHKQSNEIYAKLDEVVSKLKLAGYVP 627
Query: 773 DTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKP------IRVFKNLRVCGDCHT 826
D VL ++EEE+K + HSEK+A+ FGL++ K + IR+ KNLRVC DCH
Sbjct: 628 DCGSVLVDVEEEEKKDLVLWHSEKLALCFGLMNEEKEEEKDSCGVIRIVKNLRVCEDCHL 687
Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
K +S V REI++RD RFH K+G CSC DYW
Sbjct: 688 FFKLVSKVYEREIIVRDRTRFHCYKNGLCSCRDYW 722
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 146/566 (25%), Positives = 248/566 (43%), Gaps = 99/566 (17%)
Query: 29 PPSSS--PPFIAQPT-TSEPLSNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLL 85
PP S PF+ + +SEP + L Y R++ G D ++ +L
Sbjct: 73 PPESIVFNPFLRDLSRSSEPRATILFYQ----RIRHV----------GGRLDQFSFLPIL 118
Query: 86 KSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDI 145
K+ + G +H + + + + + +Y+ CG +N A +F M + RD+
Sbjct: 119 KAVSKVSALFEGMELHGVAFKIATLCDPFVETGFMDMYASCGRINYARNVFDEMSH-RDV 177
Query: 146 VSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGF 205
V+W++MI Y G +A +F EM + P+E ++ AC T N+ IY F
Sbjct: 178 VTWNTMIERYCRFGLVDEAFKLFEEMKDSNVMPDEMILCNIVSACGRTGNMRYNRAIYEF 237
Query: 206 LLKCGYFDSDVCVGCALIDMFV-KGSVD-----------------------------LES 235
L++ D + AL+ M+ G +D L+
Sbjct: 238 LIE-NDVRMDTHLLTALVTMYAGAGCMDMAREFFRKMSVRNLFVSTAMVSGYSKCGRLDD 296
Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
A +FD+ +K+ V WT MI+ + P++A+R+F +M SG PD ++ V+SAC+
Sbjct: 297 AQVIFDQTEKKDLVCWTTMISAYVESDYPQEALRVFEEMCCSGIKPDVVSMFSVISACAN 356
Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
L + K +HS GL ++ + +L++MYAKC G +D +R VF++M NV+SW
Sbjct: 357 LGILDKAKWVHSCIHVNGLESELSINNALINMYAKC---GGLDATRDVFEKMPRRNVVSW 413
Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
+++I + G +A+ LF+ M Q V PN TF VL C
Sbjct: 414 SSMINA-LSMHGEASDALSLFARMKQENVEPNEVTFVGVLYGC----------------- 455
Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEK-----NLVSYNTMVDAYAKNLNS 470
+ SG +E+ +K F S+ ++ L Y MVD + +
Sbjct: 456 ------------------SHSGLVEEGKKIFASMTDEYNITPKLEHYGCMVDLFGRANLL 497
Query: 471 EKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNAL 530
+A E+ IE V ++ + SL+S G + G+ RI++ E +H L
Sbjct: 498 REALEV---IESMPVASNVVIWGSLMSACRIHGELELGKFAAKRILE--LEPDHDGALVL 552
Query: 531 IS-MYSRCANVEAAFQVFKEMEDRNV 555
+S +Y+R E + + ME++NV
Sbjct: 553 MSNIYAREQRWEDVRNIRRVMEEKNV 578
>sp|P0C899|PP271_ARATH Putative pentatricopeptide repeat-containing protein At3g49142
OS=Arabidopsis thaliana GN=PCMP-H77 PE=3 SV=1
Length = 686
Score = 456 bits (1172), Expect = e-127, Method: Compositional matrix adjust.
Identities = 244/635 (38%), Positives = 358/635 (56%), Gaps = 42/635 (6%)
Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
D+ SA KVFD++ E+N + +MI G + +++F M PD +T V+
Sbjct: 89 DVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLK 148
Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
ACS G+++H A + GL+ + VG LV MY KC G + ++R V D M +
Sbjct: 149 ACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKC---GFLSEARLVLDEMSRRD 205
Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
V+SW +++ GY Q+ R +A+++ +M +++ + T AS+L A N NV
Sbjct: 206 VVSWNSLVVGYAQNQ-RFDDALEVCREMESVKISHDAGTMASLLPAVSNTTTENV----- 259
Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
MY + F + +K+LVS+N M+ Y KN
Sbjct: 260 --------------------MYVKD--------MFFKMGKKSLVSWNVMIGVYMKNAMPV 291
Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
+A EL +E G A + S+L A+ G++IH I + N + NALI
Sbjct: 292 EAVELYSRMEADGFEPDAVSITSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLENALI 351
Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGI 591
MY++C +E A VF+ M+ R+V+SWT+MI+ + G A+ +F K+ G+ P+ I
Sbjct: 352 DMYAKCGCLEKARDVFENMKSRDVVSWTAMISAYGFSGRGCDAVALFSKLQDSGLVPDSI 411
Query: 592 TYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRS 651
++ L+ACSHAGL+ EG F+ M D + I R+EH ACMVDLLGR+G + EA FI+
Sbjct: 412 AFVTTLAACSHAGLLEEGRSCFKLMTDHYKITPRLEHLACMVDLLGRAGKVKEAYRFIQD 471
Query: 652 MPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
M + + VW LGACRVH DT++G AA+ + + P+ ++LLSN+YA AG WE V
Sbjct: 472 MSMEPNERVWGALLGACRVHSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEV 531
Query: 712 ANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYL 771
NIR MK + L K G S +E + +H F VG+ SHP++ EIY ELD L K+KE GY+
Sbjct: 532 TNIRNIMKSKGLKKNPGASNVEVNRIIHTFLVGDRSHPQSDEIYRELDVLVKKMKELGYV 591
Query: 772 PDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK-----PIRVFKNLRVCGDCHT 826
PD+ LH++EEE K +L HSEK+A+ F L++T + + IR+ KNLR+CGDCH
Sbjct: 592 PDSESALHDVEEEDKETHLAVHSEKLAIVFALMNTKEEEEDSNNTIRITKNLRICGDCHV 651
Query: 827 AIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
A K IS +T REI++RD+NRFH + G CSC DYW
Sbjct: 652 AAKLISQITSREIIIRDTNRFHVFRFGVCSCGDYW 686
Score = 153 bits (386), Expect = 6e-36, Method: Compositional matrix adjust.
Identities = 130/493 (26%), Positives = 226/493 (45%), Gaps = 58/493 (11%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
++N+G + + M PD T+ +LK+C S +G+ +H T+ L
Sbjct: 115 YVNNGFYGEGVKVFGTMCGCNVRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSST 174
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
+ N L+S+Y KCG L+EA + M ++RD+VSW+S++ Y + DA+ + EM
Sbjct: 175 LFVGNGLVSMYGKCGFLSEARLVLDEM-SRRDVVSWNSLVVGYAQNQRFDDALEVCREME 233
Query: 173 ELGFCPNEYCFSAVIRACSNT--ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGS 230
+ + ++++ A SNT ENV M+VK
Sbjct: 234 SVKISHDAGTMASLLPAVSNTTTENV----------------------------MYVK-- 263
Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
+F KM +K+ V W +MI + P +A+ L+ M GF PD +++ V+
Sbjct: 264 -------DMFFKMGKKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSITSVL 316
Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
AC + + GK++H + R L ++ + +L+DMYAKC G ++ +R VF+ M
Sbjct: 317 PACGDTSALSLGKKIHGYIERKKLIPNLLLENALIDMYAKC---GCLEKARDVFENMKSR 373
Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNLLDSNVA 407
+V+SWTA+I+ Y S GR +AV LFS + + P+ F + L AC G L +
Sbjct: 374 DVVSWTAMISAYGFS-GRGCDAVALFSKLQDSGLVPDSIAFVTTLAACSHAGLLEEGRSC 432
Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAK 466
++ T K L+ ++ + R+G++++A + + + E N + ++ A
Sbjct: 433 FKLMTDHYKITPRLEHLA--CMVDLLGRAGKVKEAYRFIQDMSMEPNERVWGALLGACRV 490
Query: 467 N-------LNSEKAFELLHEIEDTGVGTS-AYTFASLLSGASSIGAIGKGEQIHARIIKS 518
+ L ++K F+L E V S Y A ++I I K + + S
Sbjct: 491 HSDTDIGLLAADKLFQLAPEQSGYYVLLSNIYAKAGRWEEVTNIRNIMKSKGLKKNPGAS 550
Query: 519 GFESNHCIYNALI 531
E N I+ L+
Sbjct: 551 NVEVNRIIHTFLV 563
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/313 (25%), Positives = 141/313 (45%), Gaps = 25/313 (7%)
Query: 425 VGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG 484
+G L+ YA + ARK F+ + E+N++ N M+ +Y N + ++ +
Sbjct: 76 LGVKLMRAYASLKDVASARKVFDEIPERNVIIINVMIRSYVNNGFYGEGVKVFGTMCGCN 135
Query: 485 VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAF 544
V YTF +L S G I G +IH K G S + N L+SMY +C + A
Sbjct: 136 VRPDHYTFPCVLKACSCSGTIVIGRKIHGSATKVGLSSTLFVGNGLVSMYGKCGFLSEAR 195
Query: 545 QVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAG 604
V EM R+V+SW S++ G+A++ ALE+ +M + I + T ++L A S+
Sbjct: 196 LVLDEMSRRDVVSWNSLVVGYAQNQRFDDALEVCREMESVKISHDAGTMASLLPAVSNT- 254
Query: 605 LISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMP---LSADVLVW 661
+E + + M+ + G + + + M+ + ++ EA+E M D +
Sbjct: 255 -TTENVMYVKDMFFKMG-KKSLVSWNVMIGVYMKNAMPVEAVELYSRMEADGFEPDAVSI 312
Query: 662 RTFLGAC----------RVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYV 711
+ L AC ++HG E K ++LE L ++YA G E
Sbjct: 313 TSVLPACGDTSALSLGKKIHGYIERKKLIPNLLLEN---------ALIDMYAKCGCLEKA 363
Query: 712 ANIRKRMKERNLI 724
++ + MK R+++
Sbjct: 364 RDVFENMKSRDVV 376
>sp|A8MQA3|PP330_ARATH Pentatricopeptide repeat-containing protein At4g21065
OS=Arabidopsis thaliana GN=PCMP-H28 PE=2 SV=2
Length = 595
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 228/567 (40%), Positives = 350/567 (61%), Gaps = 5/567 (0%)
Query: 299 FTSGKQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH-NVMSWT 356
T +Q+H+++IR G+++ D +G L+ + + KVF ++ NV W
Sbjct: 30 ITKLRQIHAFSIRHGVSISDAELGKHLIFYLVSLPSPPPMSYAHKVFSKIEKPINVFIWN 89
Query: 357 AIITGYVQSGGRDKEAVKLFSDM-IQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
+I GY + G A L+ +M + G V P+ T+ ++KA + D + E +++ +
Sbjct: 90 TLIRGYAEIGN-SISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADVRLGETIHSVVI 148
Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
+ G V NSL+ +YA G + A K F+ + EK+LV++N++++ +A+N E+A
Sbjct: 149 RSGFGSLIYVQNSLLHLYANCGDVASAYKVFDKMPEKDLVAWNSVINGFAENGKPEEALA 208
Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
L E+ G+ +T SLLS + IGA+ G+++H +IK G N N L+ +Y+
Sbjct: 209 LYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHSSNVLLDLYA 268
Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIF-YKMLADGIKPNGITYI 594
RC VE A +F EM D+N +SWTS+I G A +GF A+E+F Y +G+ P IT++
Sbjct: 269 RCGRVEEAKTLFDEMVDKNSVSWTSLIVGLAVNGFGKEAIELFKYMESTEGLLPCEITFV 328
Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
+L ACSH G++ EG+++FR M +E+ I R+EH+ CMVDLL R+G + +A E+I+SMP+
Sbjct: 329 GILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGCMVDLLARAGQVKKAYEYIKSMPM 388
Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
+V++WRT LGAC VHGD++L + A IL+ +P ++LLSN+YAS W V I
Sbjct: 389 QPNVVIWRTLLGACTVHGDSDLAEFARIQILQLEPNHSGDYVLLSNMYASEQRWSDVQKI 448
Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDT 774
RK+M + K G S +E N+VH+F +G+ SHP++ IYA+L ++ +++ GY+P
Sbjct: 449 RKQMLRDGVKKVPGHSLVEVGNRVHEFLMGDKSHPQSDAIYAKLKEMTGRLRSEGYVPQI 508
Query: 775 NFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMV 834
+ V ++EEE+K + HSEKIA+AF LIST + PI V KNLRVC DCH AIK +S V
Sbjct: 509 SNVYVDVEEEEKENAVVYHSEKIAIAFMLISTPERSPITVVKNLRVCADCHLAIKLVSKV 568
Query: 835 TGREIVLRDSNRFHHIKDGKCSCNDYW 861
REIV+RD +RFHH K+G CSC DYW
Sbjct: 569 YNREIVVRDRSRFHHFKNGSCSCQDYW 595
Score = 163 bits (413), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 112/392 (28%), Positives = 210/392 (53%), Gaps = 18/392 (4%)
Query: 78 LDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
L TY + S + R H + H + + S E ++ L+SL S ++ A+K+F
Sbjct: 22 LQTYGV--SSITKLRQIHAFSIRHGV-SISDAELGKHLIFYLVSLPSP-PPMSYAHKVFS 77
Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNTENV 196
+ ++ W+++I Y G + A ++ EM G P+ + + +I+A + +V
Sbjct: 78 KIEKPINVFIWNTLIRGYAEIGNSISAFSLYREMRVSGLVEPDTHTYPFLIKAVTTMADV 137
Query: 197 AIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMIT 256
+G I+ +++ G F S + V +L+ ++ D+ SAYKVFDKM EK+ V W +I
Sbjct: 138 RLGETIHSVVIRSG-FGSLIYVQNSLLHLYANCG-DVASAYKVFDKMPEKDLVAWNSVIN 195
Query: 257 RCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLAL 316
+ G P +A+ L+ +M G PD FT+ ++SAC+++ T GK++H + I+ GL
Sbjct: 196 GFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTR 255
Query: 317 DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLF 376
++ L+D+YA+C G V++++ +FD M+D N +SWT++I G + G KEA++LF
Sbjct: 256 NLHSSNVLLDLYARC---GRVEEAKTLFDEMVDKNSVSWTSLIVG-LAVNGFGKEAIELF 311
Query: 377 SDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQV-YTHAVKRGRALDDCVGN--SLISM 432
M + + P TF +L AC + V E Y ++ ++ + + ++ +
Sbjct: 312 KYMESTEGLLPCEITFVGILYACSHC--GMVKEGFEYFRRMREEYKIEPRIEHFGCMVDL 369
Query: 433 YARSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
AR+G+++ A + +S+ + N+V + T++ A
Sbjct: 370 LARAGQVKKAYEYIKSMPMQPNVVIWRTLLGA 401
Score = 130 bits (327), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 16/318 (5%)
Query: 76 PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
PD TY L+K+ + LG+ +HS++ RS + NSL+ LY+ CGD+ A K+
Sbjct: 119 PDTHTYPFLIKAVTTMADVRLGETIHSVVIRSGFGSLIYVQNSLLHLYANCGDVASAYKV 178
Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
F M K D+V+W+S+I+ + GK +A+ ++ EM G P+ + +++ AC+
Sbjct: 179 FDKMPEK-DLVAWNSVINGFAENGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGA 237
Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
+ +G ++ +++K G ++ L+D++ + +E A +FD+M +KN+V WT +I
Sbjct: 238 LTLGKRVHVYMIKVG-LTRNLHSSNVLLDLYARCG-RVEEAKTLFDEMVDKNSVSWTSLI 295
Query: 256 TRCTQLGCPRDAIRLFLDM-ILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGL 314
G ++AI LF M G LP T G++ ACS + G + + +R
Sbjct: 296 VGLAVNGFGKEAIELFKYMESTEGLLPCEITFVGILYACSHCGMVKEGFE-YFRRMREEY 354
Query: 315 ALDVCV---GCSLVDMYAKCTVDGSVDDSRKVFDRM-LDHNVMSWTAIITGYVQSGGRDK 370
++ + GC +VD+ A+ G V + + M + NV+ W ++ G D
Sbjct: 355 KIEPRIEHFGC-MVDLLARA---GQVKKAYEYIKSMPMQPNVVIWRTLLGACTVHGDSD- 409
Query: 371 EAVKLFSDMIQGQVAPNH 388
+ F+ + Q+ PNH
Sbjct: 410 --LAEFARIQILQLEPNH 425
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 97/210 (46%), Gaps = 6/210 (2%)
Query: 56 DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
+G+ ++A+ M KG PD T LL +C + LGK VH + + L N
Sbjct: 200 NGKPEEALALYTEMNSKGIKPDGFTIVSLLSACAKIGALTLGKRVHVYMIKVGLTRNLHS 259
Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL- 174
N L+ LY++CG + EA +F M +K VSW+S+I G +AI +F M
Sbjct: 260 SNVLLDLYARCGRVEEAKTLFDEMVDKNS-VSWTSLIVGLAVNGFGKEAIELFKYMESTE 318
Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV-CVGCALIDMFVKGSVDL 233
G P E F ++ ACS+ V G + + + + + GC ++D+ + +
Sbjct: 319 GLLPCEITFVGILYACSHCGMVKEGFEYFRRMREEYKIEPRIEHFGC-MVDLLARAG-QV 376
Query: 234 ESAYKVFDKM-TEKNTVGWTLMITRCTQLG 262
+ AY+ M + N V W ++ CT G
Sbjct: 377 KKAYEYIKSMPMQPNVVIWRTLLGACTVHG 406
>sp|Q9LSL8|PP446_ARATH Pentatricopeptide repeat-containing protein At5g65570
OS=Arabidopsis thaliana GN=PCMP-H47 PE=2 SV=1
Length = 738
Score = 455 bits (1171), Expect = e-127, Method: Compositional matrix adjust.
Identities = 252/681 (37%), Positives = 397/681 (58%), Gaps = 12/681 (1%)
Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDK 242
FS ++R C + +++ I +LK G F +++ G L+D +K D++ A +VFD
Sbjct: 68 FSQLLRQCIDERSISGIKTIQAHMLKSG-FPAEIS-GSKLVDASLKCG-DIDYARQVFDG 124
Query: 243 MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSG 302
M+E++ V W +I + ++A+ ++ MI + LPD +TLS V A S+L L
Sbjct: 125 MSERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEA 184
Query: 303 KQLHSWAIRTGLAL-DVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
++ H A+ GL + +V VG +LVDMY K G +++ V DR+ + +V+ TA+I G
Sbjct: 185 QRSHGLAVILGLEVSNVFVGSALVDMYVKF---GKTREAKLVLDRVEEKDVVLITALIVG 241
Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
Y Q G D EAVK F M+ +V PN +T+ASVL +CGNL D + ++ VK G
Sbjct: 242 YSQKG-EDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSGFES 300
Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
SL++MY R ++D+ + F+ + N VS+ +++ +N E A ++
Sbjct: 301 ALASQTSLLTMYLRCSLVDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMM 360
Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
+ +++T +S L G S++ +G QIH + K GF+ + + LI +Y +C +
Sbjct: 361 RDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKCGCSD 420
Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
A VF + + +VIS +MI +A++GF AL++F +M+ G++PN +T ++VL AC+
Sbjct: 421 MARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACN 480
Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
++ L+ EG + F S + + I+ +HYACMVDLLGR+G L EA E + + ++ D+++W
Sbjct: 481 NSRLVEEGCELFDS-FRKDKIMLTNDHYACMVDLLGRAGRLEEA-EMLTTEVINPDLVLW 538
Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
RT L AC+VH E+ + ILE +P D IL+SNLYAS G W V ++ +MK+
Sbjct: 539 RTLLSACKVHRKVEMAERITRKILEIEPGDEGTLILMSNLYASTGKWNRVIEMKSKMKDM 598
Query: 722 NLIKEAGCSWIEADNKVHKFHVGET-SHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
L K SW+E + + H F G+ SHP + +I L++L K K+ GY+ D + V +
Sbjct: 599 KLKKNPAMSWVEINKETHTFMAGDLFSHPNSEQILENLEELIKKSKDLGYVEDKSCVFQD 658
Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
+EE K + L QHSEK+A+AF + + IR+ KNLRVC DCH+ IK +S V REI+
Sbjct: 659 MEETAKERSLHQHSEKLAIAFA-VWRNVGGSIRILKNLRVCVDCHSWIKIVSRVMKREII 717
Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
RDS RFHH +DG CSC DYW
Sbjct: 718 CRDSKRFHHFRDGSCSCGDYW 738
Score = 216 bits (549), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 147/525 (28%), Positives = 268/525 (51%), Gaps = 15/525 (2%)
Query: 64 FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLY 123
T D +T N +S LL+ CI R+ K + + + +S P + + L+
Sbjct: 57 ITCDTLTTTHN------FSQLLRQCIDERSISGIKTIQAHMLKSGF-PAEISGSKLVDAS 109
Query: 124 SKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
KCGD++ A ++F M ++R IV+W+S+I+ + + +A+ M+ M+ P+EY
Sbjct: 110 LKCGDIDYARQVFDGM-SERHIVTWNSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTL 168
Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
S+V +A S+ +G + G S+V VG AL+DM+VK E A V D++
Sbjct: 169 SSVFKAFSDLSLEKEAQRSHGLAVILGLEVSNVFVGSALVDMYVKFGKTRE-AKLVLDRV 227
Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
EK+ V T +I +Q G +A++ F M++ P+ +T + V+ +C L+ +GK
Sbjct: 228 EEKDVVLITALIVGYSQKGEDTEAVKAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGK 287
Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
+H +++G + SL+ MY +C++ VDDS +VF + N +SWT++I+G V
Sbjct: 288 LIHGLMVKSGFESALASQTSLLTMYLRCSL---VDDSLRVFKCIEYPNQVSWTSLISGLV 344
Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
Q+ GR++ A+ F M++ + PN FT +S L+ C NL Q++ K G D
Sbjct: 345 QN-GREEMALIEFRKMMRDSIKPNSFTLSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDK 403
Query: 424 CVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDT 483
G+ LI +Y + G + AR F++L E +++S NTM+ +YA+N +A +L + +
Sbjct: 404 YAGSGLIDLYGKCGCSDMARLVFDTLSEVDVISLNTMIYSYAQNGFGREALDLFERMINL 463
Query: 484 GVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAA 543
G+ + T S+L ++ + +G ++ K + Y ++ + R +E A
Sbjct: 464 GLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEA 523
Query: 544 FQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKP 588
+ E+ + +++ W ++++ H A I K+L I+P
Sbjct: 524 EMLTTEVINPDLVLWRTLLSACKVHRKVEMAERITRKILE--IEP 566
Score = 170 bits (431), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 130/446 (29%), Positives = 219/446 (49%), Gaps = 14/446 (3%)
Query: 48 NRLI-YHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
N LI Y + R ++A+ LM PD T S + K+ + H L
Sbjct: 134 NSLIAYLIKHRRSKEAVEMYRLMITNNVLPDEYTLSSVFKAFSDLSLEKEAQRSHGLAVI 193
Query: 107 SKLEPNSVILNS-LISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAI 165
LE ++V + S L+ +Y K G EA + + ++D+V +++I Y +G+ +A+
Sbjct: 194 LGLEVSNVFVGSALVDMYVKFGKTREAKLVLDRV-EEKDVVLITALIVGYSQKGEDTEAV 252
Query: 166 HMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDM 225
F ML PNEY +++V+ +C N +++ G +I+G ++K G F+S + +L+ M
Sbjct: 253 KAFQSMLVEKVQPNEYTYASVLISCGNLKDIGNGKLIHGLMVKSG-FESALASQTSLLTM 311
Query: 226 FVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFT 285
+++ S+ ++ + +VF + N V WT +I+ Q G A+ F M+ P+ FT
Sbjct: 312 YLRCSL-VDDSLRVFKCIEYPNQVSWTSLISGLVQNGREEMALIEFRKMMRDSIKPNSFT 370
Query: 286 LSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFD 345
LS + CS L +F G+Q+H + G D G L+D+Y KC G D +R VFD
Sbjct: 371 LSSALRGCSNLAMFEEGRQIHGIVTKYGFDRDKYAGSGLIDLYGKC---GCSDMARLVFD 427
Query: 346 RMLDHNVMSWTAIITGYVQSG-GRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDS 404
+ + +V+S +I Y Q+G GR EA+ LF MI + PN T SVL AC N
Sbjct: 428 TLSEVDVISLNTMIYSYAQNGFGR--EALDLFERMINLGLQPNDVTVLSVLLACNNSRLV 485
Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDA- 463
+++ K L + ++ + R+GR+E+A + +LV + T++ A
Sbjct: 486 EEGCELFDSFRKDKIMLTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSAC 545
Query: 464 --YAKNLNSEKAFELLHEIEDTGVGT 487
+ K +E+ + EIE GT
Sbjct: 546 KVHRKVEMAERITRKILEIEPGDEGT 571
>sp|Q9LIC3|PP227_ARATH Putative pentatricopeptide repeat-containing protein At3g13770,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H85 PE=3
SV=1
Length = 628
Score = 454 bits (1169), Expect = e-127, Method: Compositional matrix adjust.
Identities = 225/576 (39%), Positives = 352/576 (61%), Gaps = 6/576 (1%)
Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
+++AC + G+++H+ I+T + L+ Y KC ++D+RKV D M
Sbjct: 57 ALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFYGKCDC---LEDARKVLDEM 113
Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVA 407
+ NV+SWTA+I+ Y Q+G EA+ +F++M++ PN FTFA+VL +C +
Sbjct: 114 PEKNVVSWTAMISRYSQTG-HSSEALTVFAEMMRSDGKPNEFTFATVLTSCIRASGLGLG 172
Query: 408 EQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKN 467
+Q++ VK VG+SL+ MYA++G++++AR+ FE L E+++VS ++ YA+
Sbjct: 173 KQIHGLIVKWNYDSHIFVGSSLLDMYAKAGQIKEAREIFECLPERDVVSCTAIIAGYAQL 232
Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIY 527
E+A E+ H + G+ + T+ASLL+ S + + G+Q H +++ +
Sbjct: 233 GLDEEALEMFHRLHSEGMSPNYVTYASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQ 292
Query: 528 NALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADG-I 586
N+LI MYS+C N+ A ++F M +R ISW +M+ G++KHG LE+F M + +
Sbjct: 293 NSLIDMYSKCGNLSYARRLFDNMPERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRV 352
Query: 587 KPNGITYIAVLSACSHAGLISEGWKHFRSMY-DEHGIVQRMEHYACMVDLLGRSGSLTEA 645
KP+ +T +AVLS CSH + G F M E+G EHY C+VD+LGR+G + EA
Sbjct: 353 KPDAVTLLAVLSGCSHGRMEDTGLNIFDGMVAGEYGTKPGTEHYGCIVDMLGRAGRIDEA 412
Query: 646 LEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASA 705
EFI+ MP V + LGACRVH ++G+ ++E +P++ +++LSNLYASA
Sbjct: 413 FEFIKRMPSKPTAGVLGSLLGACRVHLSVDIGESVGRRLIEIEPENAGNYVILSNLYASA 472
Query: 706 GHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKI 765
G W V N+R M ++ + KE G SWI+ + +H FH + +HP+ E+ A++ ++++K+
Sbjct: 473 GRWADVNNVRAMMMQKAVTKEPGRSWIQHEQTLHYFHANDRTHPRREEVLAKMKEISIKM 532
Query: 766 KEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCH 825
K+ GY+PD + VL++++EEQK + L HSEK+A+ FGLI+T + PIRVFKNLR+C DCH
Sbjct: 533 KQAGYVPDLSCVLYDVDEEQKEKMLLGHSEKLALTFGLIATGEGIPIRVFKNLRICVDCH 592
Query: 826 TAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
K S V RE+ LRD NRFH I DG CSC DYW
Sbjct: 593 NFAKIFSKVFEREVSLRDKNRFHQIVDGICSCGDYW 628
Score = 192 bits (489), Expect = 7e-48, Method: Compositional matrix adjust.
Identities = 118/398 (29%), Positives = 208/398 (52%), Gaps = 27/398 (6%)
Query: 55 NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSV 114
++GR+Q+A+ + ++ G Y LL +C+ R G+ VH+ + +++ P +
Sbjct: 32 SNGRLQEALLEMAML---GPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATY 88
Query: 115 ILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL 174
+ L+ Y KC L +A K+ M K ++VSW++MIS Y G +A+ +F EM+
Sbjct: 89 LRTRLLIFYGKCDCLEDARKVLDEMPEK-NVVSWTAMISRYSQTGHSSEALTVFAEMMRS 147
Query: 175 GFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLE 234
PNE+ F+ V+ +C + +G I+G ++K Y DS + VG +L+DM+ K ++
Sbjct: 148 DGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNY-DSHIFVGSSLLDMYAKAG-QIK 205
Query: 235 SAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACS 294
A ++F+ + E++ V T +I QLG +A+ +F + G P+ T + +++A S
Sbjct: 206 EAREIFECLPERDVVSCTAIIAGYAQLGLDEEALEMFHRLHSEGMSPNYVTYASLLTALS 265
Query: 295 ELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMS 354
L L GKQ H +R L + SL+DMY+KC G++ +R++FD M + +S
Sbjct: 266 GLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKC---GNLSYARRLFDNMPERTAIS 322
Query: 355 WTAIITGYVQSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACG---------NLLDS 404
W A++ GY + G +E ++LF M + +V P+ T +VL C N+ D
Sbjct: 323 WNAMLVGYSKH-GLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGLNIFDG 381
Query: 405 NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDA 442
VA + + K G C+ + M R+GR+++A
Sbjct: 382 MVAGE---YGTKPGTEHYGCI----VDMLGRAGRIDEA 412
Score = 181 bits (458), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 125/410 (30%), Positives = 209/410 (50%), Gaps = 22/410 (5%)
Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
IS + G+ +A+ +EM LG + + A++ AC + + G ++ ++K Y
Sbjct: 27 ISQLCSNGRLQEAL---LEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRY 83
Query: 212 FDSDVCVGCALIDMFVKGSVD-LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRL 270
+ LI G D LE A KV D+M EKN V WT MI+R +Q G +A+ +
Sbjct: 84 LPATYLRTRLLI---FYGKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTV 140
Query: 271 FLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAK 330
F +M+ S P+ FT + V+++C GKQ+H ++ + VG SL+DMYAK
Sbjct: 141 FAEMMRSDGKPNEFTFATVLTSCIRASGLGLGKQIHGLIVKWNYDSHIFVGSSLLDMYAK 200
Query: 331 CTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFT 390
G + ++R++F+ + + +V+S TAII GY Q G D+EA+++F + ++PN+ T
Sbjct: 201 A---GQIKEAREIFECLPERDVVSCTAIIAGYAQL-GLDEEALEMFHRLHSEGMSPNYVT 256
Query: 391 FASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLF 450
+AS+L A L + +Q + H ++R + NSLI MY++ G + AR+ F+++
Sbjct: 257 YASLLTALSGLALLDHGKQAHCHVLRRELPFYAVLQNSLIDMYSKCGNLSYARRLFDNMP 316
Query: 451 EKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGE 509
E+ +S+N M+ Y+K+ + EL + D V A T ++LSG S G
Sbjct: 317 ERTAISWNAMLVGYSKHGLGREVLELFRLMRDEKRVKPDAVTLLAVLSGCSHGRMEDTGL 376
Query: 510 QIHARII------KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
I ++ K G E CI + M R ++ AF+ K M +
Sbjct: 377 NIFDGMVAGEYGTKPGTEHYGCI----VDMLGRAGRIDEAFEFIKRMPSK 422
Score = 86.7 bits (213), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 95/184 (51%), Gaps = 11/184 (5%)
Query: 475 ELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMY 534
E L E+ G + + +LL+ A+ G+++HA +IK+ + + L+ Y
Sbjct: 38 EALLEMAMLGPEMGFHGYDALLNACLDKRALRDGQRVHAHMIKTRYLPATYLRTRLLIFY 97
Query: 535 SRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYI 594
+C +E A +V EM ++NV+SWT+MI+ +++ G ++ AL +F +M+ KPN T+
Sbjct: 98 GKCDCLEDARKVLDEMPEKNVVSWTAMISRYSQTGHSSEALTVFAEMMRSDGKPNEFTFA 157
Query: 595 AVLSACSHAGLISEGWKHFRSM-----YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFI 649
VL++C A + G K + YD H V + ++D+ ++G + EA E
Sbjct: 158 TVLTSCIRASGLGLG-KQIHGLIVKWNYDSHIFVG-----SSLLDMYAKAGQIKEAREIF 211
Query: 650 RSMP 653
+P
Sbjct: 212 ECLP 215
>sp|Q8S9M4|PP198_ARATH Pentatricopeptide repeat-containing protein At2g41080
OS=Arabidopsis thaliana GN=PCMP-H29 PE=2 SV=2
Length = 650
Score = 452 bits (1162), Expect = e-126, Method: Compositional matrix adjust.
Identities = 238/631 (37%), Positives = 374/631 (59%), Gaps = 9/631 (1%)
Query: 232 DLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVS 291
+L A++ F NT +T I CT +L +++SGF D+F + ++S
Sbjct: 28 NLREAFQRFRLNIFTNTSLFTPFIQSCTTRQSLPSGKQLHCLLVVSGFSSDKFICNHLMS 87
Query: 292 ACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHN 351
S+L F S ++ +R + + L++ Y + G + ++RKVFD M D
Sbjct: 88 MYSKLGDFPSAVAVYG-RMRKKNYMSSNI---LINGYVRA---GDLVNARKVFDEMPDRK 140
Query: 352 VMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVY 411
+ +W A+I G +Q ++E + LF +M +P+ +T SV L ++ +Q++
Sbjct: 141 LTTWNAMIAGLIQFE-FNEEGLSLFREMHGLGFSPDEYTLGSVFSGSAGLRSVSIGQQIH 199
Query: 412 THAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSE 471
+ +K G LD V +SL MY R+G+++D S+ +NLV++NT++ A+N E
Sbjct: 200 GYTIKYGLELDLVVNSSLAHMYMRNGKLQDGEIVIRSMPVRNLVAWNTLIMGNAQNGCPE 259
Query: 472 KAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALI 531
L ++ +G + TF ++LS S + G+G+QIHA IK G S + ++LI
Sbjct: 260 TVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQQIHAEAIKIGASSVVAVVSSLI 319
Query: 532 SMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLAD-GIKPNG 590
SMYS+C + A + F E ED + + W+SMI+ + HG A+E+F M ++ N
Sbjct: 320 SMYSKCGCLGDAAKAFSEREDEDEVMWSSMISAYGFHGQGDEAIELFNTMAEQTNMEINE 379
Query: 591 ITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIR 650
+ ++ +L ACSH+GL +G + F M +++G ++HY C+VDLLGR+G L +A IR
Sbjct: 380 VAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRAGCLDQAEAIIR 439
Query: 651 SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEY 710
SMP+ D+++W+T L AC +H + E+ + + IL+ DP D A ++LL+N++ASA W
Sbjct: 440 SMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEILQIDPNDSACYVLLANVHASAKRWRD 499
Query: 711 VANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGY 770
V+ +RK M+++N+ KEAG SW E +VH+F +G+ S K+ EIY+ L +L L++K GY
Sbjct: 500 VSEVRKSMRDKNVKKEAGISWFEHKGEVHQFKMGDRSQSKSKEIYSYLKELTLEMKLKGY 559
Query: 771 LPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKY 830
PDT VLH+++EE+K L QHSEK+AVAF L+ + PIR+ KNLRVC DCH A KY
Sbjct: 560 KPDTASVLHDMDEEEKESDLVQHSEKLAVAFALMILPEGAPIRIIKNLRVCSDCHVAFKY 619
Query: 831 ISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
IS++ REI LRD +RFHH +GKCSC DYW
Sbjct: 620 ISVIKNREITLRDGSRFHHFINGKCSCGDYW 650
Score = 162 bits (410), Expect = 1e-38, Method: Compositional matrix adjust.
Identities = 130/484 (26%), Positives = 229/484 (47%), Gaps = 58/484 (11%)
Query: 37 IAQPTTSEPLSNRLIYHLNDGRVQKAI--FTLDLMTQKGNHPDLDTYSLLLKSCIRSRNF 94
+ +P + +P + + + G +++A F L++ T + ++ ++SC ++
Sbjct: 8 VVRPLSVDP-ATAIATLCSKGNLREAFQRFRLNIFT------NTSLFTPFIQSCTTRQSL 60
Query: 95 HLGKLVHSLLTRSKLEPNSVILNSLISLYSK----------------------------- 125
GK +H LL S + I N L+S+YSK
Sbjct: 61 PSGKQLHCLLVVSGFSSDKFICNHLMSMYSKLGDFPSAVAVYGRMRKKNYMSSNILINGY 120
Query: 126 --CGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCF 183
GDL A K+F M + R + +W++MI+ + + + +F EM LGF P+EY
Sbjct: 121 VRAGDLVNARKVFDEMPD-RKLTTWNAMIAGLIQFEFNEEGLSLFREMHGLGFSPDEYTL 179
Query: 184 SAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKM 243
+V + +V+IG I+G+ +K G + D+ V +L M+++ L+ V M
Sbjct: 180 GSVFSGSAGLRSVSIGQQIHGYTIKYG-LELDLVVNSSLAHMYMRNG-KLQDGEIVIRSM 237
Query: 244 TEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGK 303
+N V W +I Q GCP + L+ M +SG P++ T V+S+CS+L + G+
Sbjct: 238 PVRNLVAWNTLIMGNAQNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQGQ 297
Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
Q+H+ AI+ G + V V SL+ MY+KC G + D+ K F D + + W+++I+ Y
Sbjct: 298 QIHAEAIKIGASSVVAVVSSLISMYSKC---GCLGDAAKAFSEREDEDEVMWSSMISAYG 354
Query: 364 QSGGRDKEAVKLFSDMI-QGQVAPNHFTFASVLKACGN--LLDSNVA---EQVYTHAVKR 417
G D EA++LF+ M Q + N F ++L AC + L D + V + K
Sbjct: 355 FHGQGD-EAIELFNTMAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKP 413
Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDAYAKNLNSEKAFEL 476
G CV + + R+G ++ A S+ + ++V + T++ A + N+E A +
Sbjct: 414 GLKHYTCV----VDLLGRAGCLDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRV 469
Query: 477 LHEI 480
EI
Sbjct: 470 FKEI 473
Score = 60.5 bits (145), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 60/227 (26%), Positives = 106/227 (46%), Gaps = 12/227 (5%)
Query: 55 NDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSC----IRSRNFHLGKLVHSLLTRSKLE 110
+G + ++ +M G P+ T+ +L SC IR + G+ +H+ +
Sbjct: 254 QNGCPETVLYLYKMMKISGCRPNKITFVTVLSSCSDLAIRGQ----GQQIHAEAIKIGAS 309
Query: 111 PNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVE 170
+++SLIS+YSKCG L +A K F S D V WSSMIS+Y G+ +AI +F
Sbjct: 310 SVVAVVSSLISMYSKCGCLGDAAKAF-SEREDEDEVMWSSMISAYGFHGQGDEAIELFNT 368
Query: 171 MLE-LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKG 229
M E NE F ++ ACS++ G ++ +++ F + ++D+ +
Sbjct: 369 MAEQTNMEINEVAFLNLLYACSHSGLKDKGLELFDMMVEKYGFKPGLKHYTCVVDLLGRA 428
Query: 230 SVDLESAYKVFDKMTEK-NTVGWTLMITRCTQLGCPRDAIRLFLDMI 275
L+ A + M K + V W +++ C A R+F +++
Sbjct: 429 GC-LDQAEAIIRSMPIKTDIVIWKTLLSACNIHKNAEMAQRVFKEIL 474
>sp|Q9FRI5|PPR57_ARATH Pentatricopeptide repeat-containing protein At1g25360
OS=Arabidopsis thaliana GN=PCMP-H74 PE=2 SV=1
Length = 790
Score = 451 bits (1160), Expect = e-125, Method: Compositional matrix adjust.
Identities = 248/703 (35%), Positives = 384/703 (54%), Gaps = 74/703 (10%)
Query: 229 GSVDLESAYKVFDK--MTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTL 286
S D+ A VF+K + ++TV + MIT + AI LF M GF PD FT
Sbjct: 92 ASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTF 151
Query: 287 SGVVSACSELELFTSGK----QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV-DDSR 341
+ V++ L L + Q H+ A+++G V +LV +Y+KC S+ +R
Sbjct: 152 ASVLAG---LALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCASSPSLLHSAR 208
Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRD-------------------------------K 370
KVFD +L+ + SWT ++TGYV++G D +
Sbjct: 209 KVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMISGYVNRGFYQ 268
Query: 371 EAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLI 430
EA+++ M+ + + FT+ SV++AC + +QV+ + ++R NSL+
Sbjct: 269 EALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRR-EDFSFHFDNSLV 327
Query: 431 SMYARSGRMEDARKAFESLFEKNLVSYNTMVDAY-------------------------- 464
S+Y + G+ ++AR FE + K+LVS+N ++ Y
Sbjct: 328 SLYYKCGKFDEARAIFEKMPAKDLVSWNALLSGYVSSGHIGEAKLIFKEMKEKNILSWMI 387
Query: 465 -----AKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSG 519
A+N E+ +L ++ G Y F+ + + +GA G+Q HA+++K G
Sbjct: 388 MISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIG 447
Query: 520 FESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFY 579
F+S+ NALI+MY++C VE A QVF+ M + +SW ++I +HG A A++++
Sbjct: 448 FDSSLSAGNALITMYAKCGVVEEARQVFRTMPCLDSVSWNALIAALGQHGHGAEAVDVYE 507
Query: 580 KMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRS 639
+ML GI+P+ IT + VL+ACSHAGL+ +G K+F SM + I +HYA ++DLL RS
Sbjct: 508 EMLKKGIRPDRITLLTVLTACSHAGLVDQGRKYFDSMETVYRIPPGADHYARLIDLLCRS 567
Query: 640 GSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLS 699
G ++A I S+P +W L CRVHG+ ELG AA+ + P+ ++LLS
Sbjct: 568 GKFSDAESVIESLPFKPTAEIWEALLSGCRVHGNMELGIIAADKLFGLIPEHDGTYMLLS 627
Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELD 759
N++A+ G WE VA +RK M++R + KE CSWIE + +VH F V +TSHP+ +Y L
Sbjct: 628 NMHAATGQWEEVARVRKLMRDRGVKKEVACSWIEMETQVHTFLVDDTSHPEAEAVYIYLQ 687
Query: 760 QLALKIKEFGYLPDTNFVLHELEEE-QKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNL 818
L +++ GY+PDT+FVLH++E + K L HSEKIAVAFGL+ IR+FKNL
Sbjct: 688 DLGKEMRRLGYVPDTSFVLHDVESDGHKEDMLTTHSEKIAVAFGLMKLPPGTTIRIFKNL 747
Query: 819 RVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
R CGDCH +++S V R+I+LRD RFHH ++G+CSC ++W
Sbjct: 748 RTCGDCHNFFRFLSWVVQRDIILRDRKRFHHFRNGECSCGNFW 790
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 145/608 (23%), Positives = 256/608 (42%), Gaps = 124/608 (20%)
Query: 75 HPDL-----DTYSLLLKSCI--RSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
+PDL + Y+ L+ C+ R + L + VH + +P + ILN LI +Y K
Sbjct: 4 NPDLVRAIANRYAANLRLCLPLRRTSLQLARAVHGNIITFGFQPRAHILNRLIDVYCKSS 63
Query: 128 DLNEANKIFKSMGNK--------------------------------RDIVSWSSMISSY 155
+LN A ++F + RD V +++MI+ +
Sbjct: 64 ELNYARQLFDEISEPDKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGF 123
Query: 156 VNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRA---CSNTENVAIGHIIYGFLLKCGYF 212
+ AI++F +M GF P+ + F++V+ ++ E + GY
Sbjct: 124 SHNNDGYSAINLFCKMKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYI 183
Query: 213 DSDVCVGCALIDMFVKGSVD---LESAYKVFDKMTEKNTVGWTLMITRCTQ--------- 260
S V AL+ ++ K + L SA KVFD++ EK+ WT M+T +
Sbjct: 184 TS---VSNALVSVYSKCASSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEE 240
Query: 261 -----------------------LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELE 297
G ++A+ + M+ SG D FT V+ AC+
Sbjct: 241 LLEGMDDNMKLVAYNAMISGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAG 300
Query: 298 LFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTA 357
L GKQ+H++ +R SLV +Y KC G D++R +F++M +++SW A
Sbjct: 301 LLQLGKQVHAYVLRRE-DFSFHFDNSLVSLYYKC---GKFDEARAIFEKMPAKDLVSWNA 356
Query: 358 IITGYVQSG------------------------------GRDKEAVKLFSDMIQGQVAPN 387
+++GYV SG G +E +KLFS M + P
Sbjct: 357 LLSGYVSSGHIGEAKLIFKEMKEKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPC 416
Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
+ F+ +K+C L +Q + +K G GN+LI+MYA+ G +E+AR+ F
Sbjct: 417 DYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSAGNALITMYAKCGVVEEARQVFR 476
Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
++ + VS+N ++ A ++ + +A ++ E+ G+ T ++L+ S G + +
Sbjct: 477 TMPCLDSVSWNALIAALGQHGHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQ 536
Query: 508 GEQIHARI-----IKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVIS-WTSM 561
G + + I G ++H Y LI + R A V + + + W ++
Sbjct: 537 GRKYFDSMETVYRIPPG--ADH--YARLIDLLCRSGKFSDAESVIESLPFKPTAEIWEAL 592
Query: 562 ITGFAKHG 569
++G HG
Sbjct: 593 LSGCRVHG 600
Score = 127 bits (319), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 91/283 (32%), Positives = 139/283 (49%), Gaps = 35/283 (12%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
++N G Q+A+ + M G D TY ++++C + LGK VH+ + R + + +
Sbjct: 261 YVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRRE-DFS 319
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
NSL+SLY KCG +EA IF+ M K D+VSW++++S YV+ G +A +F EM
Sbjct: 320 FHFDNSLVSLYYKCGKFDEARAIFEKMPAK-DLVSWNALLSGYVSSGHIGEAKLIFKEMK 378
Query: 173 EL-------------------------------GFCPNEYCFSAVIRACSNTENVAIGHI 201
E GF P +Y FS I++C+ G
Sbjct: 379 EKNILSWMIMISGLAENGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQ 438
Query: 202 IYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQL 261
+ LLK G FDS + G ALI M+ K V +E A +VF M ++V W +I Q
Sbjct: 439 YHAQLLKIG-FDSSLSAGNALITMYAKCGV-VEEARQVFRTMPCLDSVSWNALIAALGQH 496
Query: 262 GCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQ 304
G +A+ ++ +M+ G PDR TL V++ACS L G++
Sbjct: 497 GHGAEAVDVYEEMLKKGIRPDRITLLTVLTACSHAGLVDQGRK 539
Score = 103 bits (257), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 92/355 (25%), Positives = 151/355 (42%), Gaps = 91/355 (25%)
Query: 422 DDCVGNSLISMYARSGRMEDARKAFES--LFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
D +++S Y SG + AR FE + ++ V YN M+ ++ N + A L +
Sbjct: 79 DKIARTTMVSGYCASGDITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCK 138
Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKG-EQIHARIIKSGFESNHCIYNALISMYSRCA 538
++ G +TFAS+L+G + + K Q HA +KSG + NAL+S+YS+CA
Sbjct: 139 MKHEGFKPDNFTFASVLAGLALVADDEKQCVQFHAAALKSGAGYITSVSNALVSVYSKCA 198
Query: 539 N----VEAAFQVFKEMEDRNVISWTSMITGFAKHG------------------------- 569
+ + +A +VF E+ +++ SWT+M+TG+ K+G
Sbjct: 199 SSPSLLHSARKVFDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGMDDNMKLVAYNAMI 258
Query: 570 -------FAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGI 622
F ALE+ +M++ GI+ + TY +V+ AC+ AGL+ G + H
Sbjct: 259 SGYVNRGFYQEALEMVRRMVSSGIELDEFTYPSVIRACATAGLLQLGKQ-------VHAY 311
Query: 623 VQRMEHYA-----CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELG 677
V R E ++ +V L + G EA MP + D++ W L
Sbjct: 312 VLRREDFSFHFDNSLVSLYYKCGKFDEARAIFEKMP-AKDLVSWNALLSG---------- 360
Query: 678 KHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWI 732
Y S+GH I K MKE+N++ SW+
Sbjct: 361 ------------------------YVSSGHIGEAKLIFKEMKEKNIL-----SWM 386
Score = 66.2 bits (160), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 80/159 (50%), Gaps = 10/159 (6%)
Query: 56 DGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVI 115
+G ++ + M ++G P +S +KSC + G+ H+ L + + +
Sbjct: 395 NGFGEEGLKLFSCMKREGFEPCDYAFSGAIKSCAVLGAYCNGQQYHAQLLKIGFDSSLSA 454
Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELG 175
N+LI++Y+KCG + EA ++F++M D VSW+++I++ G +A+ ++ EML+ G
Sbjct: 455 GNALITMYAKCGVVEEARQVFRTMPC-LDSVSWNALIAALGQHGHGAEAVDVYEEMLKKG 513
Query: 176 FCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDS 214
P+ V+ ACS+ V G YFDS
Sbjct: 514 IRPDRITLLTVLTACSHAGLVDQGR---------KYFDS 543
Score = 49.3 bits (116), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/308 (19%), Positives = 121/308 (39%), Gaps = 57/308 (18%)
Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMED------------------ 552
+H II GF+ I N LI +Y + + + A Q+F E+ +
Sbjct: 36 VHGNIITFGFQPRAHILNRLIDVYCKSSELNYARQLFDEISEPDKIARTTMVSGYCASGD 95
Query: 553 ---------------RNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVL 597
R+ + + +MITGF+ + A+ +F KM +G KP+ T+ +VL
Sbjct: 96 ITLARGVFEKAPVCMRDTVMYNAMITGFSHNNDGYSAINLFCKMKHEGFKPDNFTFASVL 155
Query: 598 SACSHAGLISEGWK-----HFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSM 652
+ + L+++ K H ++ G + + + +V + + S L R +
Sbjct: 156 AGLA---LVADDEKQCVQFHAAALKSGAGYITSVSN--ALVSVYSKCASSPSLLHSARKV 210
Query: 653 ---PLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWE 709
L D W T + +G +LG+ E + D A+ + + Y + G ++
Sbjct: 211 FDEILEKDERSWTTMMTGYVKNGYFDLGEELLEGM--DDNMKLVAYNAMISGYVNRGFYQ 268
Query: 710 YVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFG 769
+ +RM S IE D + + + L++ ++ L+ ++F
Sbjct: 269 EALEMVRRMVS---------SGIELDEFTYPSVIRACATAGLLQLGKQVHAYVLRREDFS 319
Query: 770 YLPDTNFV 777
+ D + V
Sbjct: 320 FHFDNSLV 327
>sp|Q9FI80|PP425_ARATH Pentatricopeptide repeat-containing protein At5g48910
OS=Arabidopsis thaliana GN=PCMP-H38 PE=2 SV=1
Length = 646
Score = 450 bits (1158), Expect = e-125, Method: Compositional matrix adjust.
Identities = 244/607 (40%), Positives = 350/607 (57%), Gaps = 50/607 (8%)
Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVD-GSVDDSRKVFDRMLDHNVMSWTAIITGY 362
Q+H+ I++G D ++ A + +D + K+F++M N SW II G+
Sbjct: 41 QIHAVFIKSGQMRDTLAAAEILRFCATSDLHHRDLDYAHKIFNQMPQRNCFSWNTIIRGF 100
Query: 363 VQSGGRDKE--AVKLFSDMIQGQ-VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
+S DK A+ LF +M+ + V PN FTF SVLKAC +Q++ A+K G
Sbjct: 101 SESD-EDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACAKTGKIQEGKQIHGLALKYGF 159
Query: 420 ALDDCVGNSLISMYARSGRMEDAR------------------------------------ 443
D+ V ++L+ MY G M+DAR
Sbjct: 160 GGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVVMTDRRKRDGEIVLWNVMIDGYM 219
Query: 444 -----KAFESLFEK----NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFAS 494
KA LF+K ++VS+NTM+ Y+ N + A E+ E++ + + T S
Sbjct: 220 RLGDCKAARMLFDKMRQRSVVSWNTMISGYSLNGFFKDAVEVFREMKKGDIRPNYVTLVS 279
Query: 495 LLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRN 554
+L S +G++ GE +H SG + + +ALI MYS+C +E A VF+ + N
Sbjct: 280 VLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALIDMYSKCGIIEKAIHVFERLPREN 339
Query: 555 VISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFR 614
VI+W++MI GFA HG A A++ F KM G++P+ + YI +L+ACSH GL+ EG ++F
Sbjct: 340 VITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVAYINLLTACSHGGLVEEGRRYFS 399
Query: 615 SMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDT 674
M G+ R+EHY CMVDLLGRSG L EA EFI +MP+ D ++W+ LGACR+ G+
Sbjct: 400 QMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFILNMPIKPDDVIWKALLGACRMQGNV 459
Query: 675 ELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEA 734
E+GK A ++++ P D A++ LSN+YAS G+W V+ +R RMKE+++ K+ GCS I+
Sbjct: 460 EMGKRVANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDIRKDPGCSLIDI 519
Query: 735 DNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHS 794
D +H+F V + SHPK EI + L +++ K++ GY P T VL LEEE K L HS
Sbjct: 520 DGVLHEFVVEDDSHPKAKEINSMLVEISDKLRLAGYRPITTQVLLNLEEEDKENVLHYHS 579
Query: 795 EKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGK 854
EKIA AFGLISTS KPIR+ KNLR+C DCH++IK IS V R+I +RD RFHH +DG
Sbjct: 580 EKIATAFGLISTSPGKPIRIVKNLRICEDCHSSIKLISKVYKRKITVRDRKRFHHFQDGS 639
Query: 855 CSCNDYW 861
CSC DYW
Sbjct: 640 CSCMDYW 646
Score = 134 bits (338), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 115/480 (23%), Positives = 211/480 (43%), Gaps = 97/480 (20%)
Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYV--NRGKQVDAIHMFVEMLELGFC-PNEYCFS 184
DL+ A+KIF M +R+ SW+++I + + K + AI +F EM+ F PN + F
Sbjct: 74 DLDYAHKIFNQM-PQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFP 132
Query: 185 AVIRACSNTENVAIGHIIYGFLLK-------------------CGYF------------- 212
+V++AC+ T + G I+G LK CG+
Sbjct: 133 SVLKACAKTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIE 192
Query: 213 ------------DSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQ 260
D ++ + +ID +++ D ++A +FDKM +++ V W MI+ +
Sbjct: 193 KDMVVMTDRRKRDGEIVLWNVMIDGYMRLG-DCKAARMLFDKMRQRSVVSWNTMISGYSL 251
Query: 261 LGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCV 320
G +DA+ +F +M P+ TL V+ A S L G+ LH +A +G+ +D +
Sbjct: 252 NGFFKDAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVL 311
Query: 321 GCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMI 380
G +L+DMY+KC G ++ + VF+R+ NV++W+A+I G+ G+ +A+ F M
Sbjct: 312 GSALIDMYSKC---GIIEKAIHVFERLPRENVITWSAMINGFAIH-GQAGDAIDCFCKMR 367
Query: 381 QGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRME 440
Q V P+ + ++L AC + G +E
Sbjct: 368 QAGVRPSDVAYINLLTAC-----------------------------------SHGGLVE 392
Query: 441 DARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASL 495
+ R+ F + E + Y MVD ++ ++A E I + + + +L
Sbjct: 393 EGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEF---ILNMPIKPDDVIWKAL 449
Query: 496 LSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNV 555
L G + G+++ A I+ + Y AL +MY+ N ++ M+++++
Sbjct: 450 LGACRMQGNVEMGKRV-ANILMDMVPHDSGAYVALSNMYASQGNWSEVSEMRLRMKEKDI 508
Score = 92.8 bits (229), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/283 (27%), Positives = 133/283 (46%), Gaps = 12/283 (4%)
Query: 103 LLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQV 162
+ R K + V+ N +I Y + GD A +F M +R +VSW++MIS Y G
Sbjct: 198 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDKM-RQRSVVSWNTMISGYSLNGFFK 256
Query: 163 DAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCAL 222
DA+ +F EM + PN +V+ A S ++ +G ++ + G DV +G AL
Sbjct: 257 DAVEVFREMKKGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDV-LGSAL 315
Query: 223 IDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPD 282
IDM+ K + +E A VF+++ +N + W+ MI G DAI F M +G P
Sbjct: 316 IDMYSKCGI-IEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPS 374
Query: 283 RFTLSGVVSACSELELFTSGKQLHSWAIRT-GLALDV-CVGCSLVDMYAKCTVDGSVDDS 340
+++ACS L G++ S + GL + GC +VD+ + G +D++
Sbjct: 375 DVAYINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGC-MVDLLGR---SGLLDEA 430
Query: 341 RK-VFDRMLDHNVMSWTAIITGYVQSGGRD--KEAVKLFSDMI 380
+ + + + + + W A++ G + K + DM+
Sbjct: 431 EEFILNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMV 473
>sp|Q9FK93|PP406_ARATH Pentatricopeptide repeat-containing protein At5g39680
OS=Arabidopsis thaliana GN=EMB2744 PE=2 SV=1
Length = 710
Score = 449 bits (1154), Expect = e-125, Method: Compositional matrix adjust.
Identities = 238/682 (34%), Positives = 389/682 (57%), Gaps = 8/682 (1%)
Query: 183 FSAVIRACSNTENVAIGHIIYGFLLKCGYFD--SDVCVGCALIDMFVKGSVDLESAYKVF 240
+ +++ C+N+ + IG I+ L+ D +LI+++VK + A K+F
Sbjct: 34 LNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVR-ARKLF 92
Query: 241 DKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSG-FLPDRFTLSGVVSACSELELF 299
D M E+N V W M+ G + ++LF M SG P+ F + V +CS
Sbjct: 93 DLMPERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNSGRI 152
Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
GKQ H ++ GL V +LV MY+ C+ +G ++ +V D + ++ +++ +
Sbjct: 153 EEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNG---EAIRVLDDLPYCDLSVFSSAL 209
Query: 360 TGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGR 419
+GY++ G KE + + N+ T+ S L+ NL D N+A QV++ V+ G
Sbjct: 210 SGYLECGAF-KEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFGF 268
Query: 420 ALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHE 479
+ +LI+MY + G++ A++ F+ +N+ T++DAY ++ + E+A L +
Sbjct: 269 NAEVEACGALINMYGKCGKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFEEALNLFSK 328
Query: 480 IEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCAN 539
++ V + YTFA LL+ + + + +G+ +H ++KSG+ ++ + NAL++MY++ +
Sbjct: 329 MDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMYAKSGS 388
Query: 540 VEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSA 599
+E A + F M R++++W +MI+G + HG ALE F +M+ G PN IT+I VL A
Sbjct: 389 IEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFIGVLQA 448
Query: 600 CSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVL 659
CSH G + +G +F + + + ++HY C+V LL ++G +A +F+R+ P+ DV+
Sbjct: 449 CSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMFKDAEDFMRTAPIEWDVV 508
Query: 660 VWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMK 719
WRT L AC V + LGK AE +E+ P D ++LLSN++A + WE VA +R M
Sbjct: 509 AWRTLLNACYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIHAKSREWEGVAKVRSLMN 568
Query: 720 ERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLH 779
R + KE G SWI N+ H F + HP+ IYA++ ++ KIK GY PD H
Sbjct: 569 NRGVKKEPGVSWIGIRNQTHVFLAEDNQHPEITLIYAKVKEVMSKIKPLGYSPDVAGAFH 628
Query: 780 ELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREI 839
+++EEQ+ L HSEK+AVA+GLI T + P+ V KN+R+C DCH+AIK IS ++ R I
Sbjct: 629 DVDEEQREDNLSYHSEKLAVAYGLIKTPEKSPLYVTKNVRICDDCHSAIKLISKISKRYI 688
Query: 840 VLRDSNRFHHIKDGKCSCNDYW 861
V+RDSNRFHH DG+CSC DYW
Sbjct: 689 VIRDSNRFHHFLDGQCSCCDYW 710
Score = 174 bits (441), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 149/561 (26%), Positives = 261/561 (46%), Gaps = 35/561 (6%)
Query: 78 LDTYSLLLKSCIRSRNFHLGKLVHSLL---TRSKLEPNSVILNSLISLYSKCGDLNEANK 134
+D + LLK C S +G+ +H+ L +S ++ +NSLI+LY KC + A K
Sbjct: 31 IDRLNELLKVCANSSYLRIGESIHAHLIVTNQSSRAEDAYQINSLINLYVKCRETVRARK 90
Query: 135 IFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFC-PNEYCFSAVIRACSNT 193
+F M +R++VSW +M+ Y N G + + +F M G PNE+ + V ++CSN+
Sbjct: 91 LFDLMP-ERNVVSWCAMMKGYQNSGFDFEVLKLFKSMFFSGESRPNEFVATVVFKSCSNS 149
Query: 194 ENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTL 253
+ G +G LK G + V L+ M+ S + E A +V D + + ++
Sbjct: 150 GRIEEGKQFHGCFLKYGLISHEF-VRNTLVYMYSLCSGNGE-AIRVLDDLPYCDLSVFSS 207
Query: 254 MITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTG 313
++ + G ++ + + F+ + T + S L Q+HS +R G
Sbjct: 208 ALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRDLNLALQVHSRMVRFG 267
Query: 314 LALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAV 373
+V +L++MY KC G V +++VFD N+ T I+ Y Q + EA+
Sbjct: 268 FNAEVEACGALINMYGKC---GKVLYAQRVFDDTHAQNIFLNTTIMDAYFQDKSFE-EAL 323
Query: 374 KLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMY 433
LFS M +V PN +TFA +L + L + ++ +K G VGN+L++MY
Sbjct: 324 NLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNHVMVGNALVNMY 383
Query: 434 ARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFA 493
A+SG +EDARKAF + +++V++NTM+ + + +A E + TG + TF
Sbjct: 384 AKSGSIEDARKAFSGMTFRDIVTWNTMISGCSHHGLGREALEAFDRMIFTGEIPNRITFI 443
Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCI--YNALISMYSRCANVEAAFQVFKEME 551
+L S IG + +G +++K F+ I Y ++ + S+ +FK+ E
Sbjct: 444 GVLQACSHIGFVEQGLHYFNQLMKK-FDVQPDIQHYTCIVGLLSKAG-------MFKDAE 495
Query: 552 D--------RNVISWTSMITGFAKHGFAARALEIFYKMLADGIK--PNGITYIAVLSACS 601
D +V++W +++ + R + K+ I+ PN +LS
Sbjct: 496 DFMRTAPIEWDVVAWRTLLNA----CYVRRNYRLGKKVAEYAIEKYPNDSGVYVLLSNIH 551
Query: 602 HAGLISEGWKHFRSMYDEHGI 622
EG RS+ + G+
Sbjct: 552 AKSREWEGVAKVRSLMNNRGV 572
Score = 124 bits (312), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 98/390 (25%), Positives = 188/390 (48%), Gaps = 9/390 (2%)
Query: 76 PDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKI 135
P+ +++ KSC S GK H + L + + N+L+ +YS C EA ++
Sbjct: 134 PNEFVATVVFKSCSNSGRIEEGKQFHGCFLKYGLISHEFVRNTLVYMYSLCSGNGEAIRV 193
Query: 136 FKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTEN 195
+ D+ +SS +S Y+ G + + + + F N + + +R SN +
Sbjct: 194 LDDLP-YCDLSVFSSALSGYLECGAFKEGLDVLRKTANEDFVWNNLTYLSSLRLFSNLRD 252
Query: 196 VAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMI 255
+ + ++ +++ G F+++V ALI+M+ K L A +VFD +N T ++
Sbjct: 253 LNLALQVHSRMVRFG-FNAEVEACGALINMYGKCGKVL-YAQRVFDDTHAQNIFLNTTIM 310
Query: 256 TRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLA 315
Q +A+ LF M P+ +T + ++++ +EL L G LH +++G
Sbjct: 311 DAYFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYR 370
Query: 316 LDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKL 375
V VG +LV+MYAK GS++D+RK F M ++++W +I+G G +EA++
Sbjct: 371 NHVMVGNALVNMYAK---SGSIEDARKAFSGMTFRDIVTWNTMISG-CSHHGLGREALEA 426
Query: 376 FSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNS-LISMYA 434
F MI PN TF VL+AC ++ + +K+ D + ++ + +
Sbjct: 427 FDRMIFTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLS 486
Query: 435 RSGRMEDARKAFESL-FEKNLVSYNTMVDA 463
++G +DA + E ++V++ T+++A
Sbjct: 487 KAGMFKDAEDFMRTAPIEWDVVAWRTLLNA 516
Score = 77.8 bits (190), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 97/206 (47%), Gaps = 1/206 (0%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
+ D ++A+ M K P+ T+++LL S G L+H L+ +S +
Sbjct: 313 YFQDKSFEEALNLFSKMDTKEVPPNEYTFAILLNSIAELSLLKQGDLLHGLVLKSGYRNH 372
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
++ N+L+++Y+K G + +A K F M RDIV+W++MIS + G +A+ F M+
Sbjct: 373 VMVGNALVNMYAKSGSIEDARKAFSGM-TFRDIVTWNTMISGCSHHGLGREALEAFDRMI 431
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
G PN F V++ACS+ V G + L+K D+ ++ + K +
Sbjct: 432 FTGEIPNRITFIGVLQACSHIGFVEQGLHYFNQLMKKFDVQPDIQHYTCIVGLLSKAGMF 491
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRC 258
++ + E + V W ++ C
Sbjct: 492 KDAEDFMRTAPIEWDVVAWRTLLNAC 517
>sp|Q9LZ19|PP364_ARATH Pentatricopeptide repeat-containing protein At5g04780
OS=Arabidopsis thaliana GN=PCMP-H16 PE=2 SV=2
Length = 635
Score = 448 bits (1153), Expect = e-125, Method: Compositional matrix adjust.
Identities = 220/585 (37%), Positives = 361/585 (61%), Gaps = 4/585 (0%)
Query: 277 SGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGS 336
S +R + ++ C+ K H IR L DV + L++ Y+KC G
Sbjct: 55 SNEFSNRNLVHEILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKC---GF 111
Query: 337 VDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLK 396
V+ +R+VFD ML+ +++SW +I Y ++ + EA+ +F +M + FT +SVL
Sbjct: 112 VELARQVFDGMLERSLVSWNTMIGLYTRNR-MESEALDIFLEMRNEGFKFSEFTISSVLS 170
Query: 397 ACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS 456
ACG D+ ++++ +VK L+ VG +L+ +YA+ G ++DA + FES+ +K+ V+
Sbjct: 171 ACGVNCDALECKKLHCLSVKTCIDLNLYVGTALLDLYAKCGMIKDAVQVFESMQDKSSVT 230
Query: 457 YNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARII 516
+++MV Y +N N E+A L + + + +T +S++ S++ A+ +G+Q+HA I
Sbjct: 231 WSSMVAGYVQNKNYEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVIC 290
Query: 517 KSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALE 576
KSGF SN + ++ + MY++C ++ ++ +F E++++N+ W ++I+GFAKH +
Sbjct: 291 KSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEKNLELWNTIISGFAKHARPKEVMI 350
Query: 577 IFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLL 636
+F KM DG+ PN +T+ ++LS C H GL+ EG + F+ M +G+ + HY+CMVD+L
Sbjct: 351 LFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVHYSCMVDIL 410
Query: 637 GRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHI 696
GR+G L+EA E I+S+P +W + L +CRV+ + EL + AAE + E +P++ H+
Sbjct: 411 GRAGLLSEAYELIKSIPFDPTASIWGSLLASCRVYKNLELAEVAAEKLFELEPENAGNHV 470
Query: 697 LLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYA 756
LLSN+YA+ WE +A RK +++ ++ K G SWI+ +KVH F VGE+ HP+ EI +
Sbjct: 471 LLSNIYAANKQWEEIAKSRKLLRDCDVKKVRGKSWIDIKDKVHTFSVGESGHPRIREICS 530
Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
LD L +K ++FGY P LH++E +K + L QHSEK+A+ FGL+ +S P+R+ K
Sbjct: 531 TLDNLVIKFRKFGYKPSVEHELHDVEIGKKEELLMQHSEKLALVFGLMCLPESSPVRIMK 590
Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
NLR+C DCH +K SM T R I++RD NRFHH DG CSC D+W
Sbjct: 591 NLRICVDCHEFMKAASMATRRFIIVRDVNRFHHFSDGHCSCGDFW 635
Score = 170 bits (430), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 119/402 (29%), Positives = 198/402 (49%), Gaps = 47/402 (11%)
Query: 84 LLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKR 143
+L+ C R+ K H + R LE + +LN LI+ YSKCG + A ++F M +R
Sbjct: 67 ILQLCARNGAVMEAKACHGKIIRIDLEGDVTLLNVLINAYSKCGFVELARQVFDGML-ER 125
Query: 144 DIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIY 203
+VSW++MI Y + +A+ +F+EM GF +E+ S+V+ AC + ++
Sbjct: 126 SLVSWNTMIGLYTRNRMESEALDIFLEMRNEGFKFSEFTISSVLSACGVNCDALECKKLH 185
Query: 204 GFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGC 263
+K D ++ VG AL+D++ K + ++ A +VF+ M +K++V W+ M+ Q
Sbjct: 186 CLSVK-TCIDLNLYVGTALLDLYAKCGM-IKDAVQVFESMQDKSSVTWSSMVAGYVQNKN 243
Query: 264 PRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCS 323
+A+ L+ ++FTLS V+ ACS L GKQ+H+ ++G +V V S
Sbjct: 244 YEEALLLYRRAQRMSLEQNQFTLSSVICACSNLAALIEGKQMHAVICKSGFGSNVFVASS 303
Query: 324 LVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQ 383
VDMYAKC GS+ +S +F + + N+ W II+G+ + R KE + LF M Q
Sbjct: 304 AVDMYAKC---GSLRESYIIFSEVQEKNLELWNTIISGFAKH-ARPKEVMILFEKMQQDG 359
Query: 384 VAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDAR 443
+ PN TF+S+L CG+ +G +E+ R
Sbjct: 360 MHPNEVTFSSLLSVCGH-----------------------------------TGLVEEGR 384
Query: 444 KAFESL-----FEKNLVSYNTMVDAYAKNLNSEKAFELLHEI 480
+ F+ + N+V Y+ MVD + +A+EL+ I
Sbjct: 385 RFFKLMRTTYGLSPNVVHYSCMVDILGRAGLLSEAYELIKSI 426
Score = 61.6 bits (148), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/163 (23%), Positives = 79/163 (48%), Gaps = 3/163 (1%)
Query: 97 GKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYV 156
GK +H+++ +S N + +S + +Y+KCG L E+ IF + K ++ W+++IS +
Sbjct: 282 GKQMHAVICKSGFGSNVFVASSAVDMYAKCGSLRESYIIFSEVQEK-NLELWNTIISGFA 340
Query: 157 NRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDV 216
+ + + +F +M + G PNE FS+++ C +T V G + + +V
Sbjct: 341 KHARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNV 400
Query: 217 CVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVG-WTLMITRC 258
++D+ + + L AY++ + T W ++ C
Sbjct: 401 VHYSCMVDILGRAGL-LSEAYELIKSIPFDPTASIWGSLLASC 442
Score = 41.2 bits (95), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 48/99 (48%), Gaps = 1/99 (1%)
Query: 57 GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLL-TRSKLEPNSVI 115
R ++ + + M Q G HP+ T+S LL C + G+ L+ T L PN V
Sbjct: 343 ARPKEVMILFEKMQQDGMHPNEVTFSSLLSVCGHTGLVEEGRRFFKLMRTTYGLSPNVVH 402
Query: 116 LNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
+ ++ + + G L+EA ++ KS+ W S+++S
Sbjct: 403 YSCMVDILGRAGLLSEAYELIKSIPFDPTASIWGSLLAS 441
>sp|Q56XI1|PPR25_ARATH Pentatricopeptide repeat-containing protein At1g09410
OS=Arabidopsis thaliana GN=PCMP-H18 PE=2 SV=2
Length = 705
Score = 447 bits (1151), Expect = e-124, Method: Compositional matrix adjust.
Identities = 262/748 (35%), Positives = 417/748 (55%), Gaps = 66/748 (8%)
Query: 117 NSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
N I+ S+ G ++EA K+F S +K I SW+SM++ Y DA +F EM +
Sbjct: 21 NVRITHLSRIGKIHEARKLFDSCDSK-SISSWNSMVAGYFANLMPRDARKLFDEMPD--- 76
Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFV-KGSVDLES 235
N ++ ++ + ++ + + +V AL+ +V G VD+
Sbjct: 77 -RNIISWNGLVSGYMKNGEIDEARKVFDLMP-----ERNVVSWTALVKGYVHNGKVDV-- 128
Query: 236 AYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSE 295
A +F KM EKN V WT+M+ Q G DA +L+ +MI PD+ ++
Sbjct: 129 AESLFWKMPEKNKVSWTVMLIGFLQDGRIDDACKLY-EMI-----PDKDNIA-------- 174
Query: 296 LELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSW 355
RT + +C +G VD++R++FD M + +V++W
Sbjct: 175 ---------------RTSMIHGLCK-------------EGRVDEAREIFDEMSERSVITW 206
Query: 356 TAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAV 415
T ++TGY Q+ R +A K+F M + ++ S+L G + + + + V
Sbjct: 207 TTMVTGYGQNN-RVDDARKIFDVMPE----KTEVSWTSML--MGYVQNGRIEDAEELFEV 259
Query: 416 KRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFE 475
+ + C N++IS + G + AR+ F+S+ E+N S+ T++ + +N +A +
Sbjct: 260 MPVKPVIAC--NAMISGLGQKGEIAKARRVFDSMKERNDASWQTVIKIHERNGFELEALD 317
Query: 476 LLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYS 535
L ++ GV + T S+LS +S+ ++ G+Q+HA++++ F+ + + + L++MY
Sbjct: 318 LFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVDVYVASVLMTMYI 377
Query: 536 RCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKM-LADGIKPNGITYI 594
+C + + +F +++I W S+I+G+A HG AL++F +M L+ KPN +T++
Sbjct: 378 KCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLGEEALKVFCEMPLSGSTKPNEVTFV 437
Query: 595 AVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPL 654
A LSACS+AG++ EG K + SM G+ HYACMVD+LGR+G EA+E I SM +
Sbjct: 438 ATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAGRFNEAMEMIDSMTV 497
Query: 655 SADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANI 714
D VW + LGACR H ++ + A+ ++E +P++ +ILLSN+YAS G W VA +
Sbjct: 498 EPDAAVWGSLLGACRTHSQLDVAEFCAKKLIEIEPENSGTYILLSNMYASQGRWADVAEL 557
Query: 715 RKRMKERNLIKEAGCSWIEADNKVHKFHVGE-TSHPKTLEIYAELDQLALKIKEFGYLPD 773
RK MK R + K GCSW E +NKVH F G SHP+ I LD+L ++E GY PD
Sbjct: 558 RKLMKTRLVRKSPGCSWTEVENKVHAFTRGGINSHPEQESILKILDELDGLLREAGYNPD 617
Query: 774 TNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISM 833
++ LH+++EE+KV L HSE++AVA+ L+ S+ PIRV KNLRVC DCHTAIK IS
Sbjct: 618 CSYALHDVDEEEKVNSLKYHSERLAVAYALLKLSEGIPIRVMKNLRVCSDCHTAIKIISK 677
Query: 834 VTGREIVLRDSNRFHHIKDGKCSCNDYW 861
V REI+LRD+NRFHH ++G+CSC DYW
Sbjct: 678 VKEREIILRDANRFHHFRNGECSCKDYW 705
Score = 125 bits (315), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 117/487 (24%), Positives = 223/487 (45%), Gaps = 29/487 (5%)
Query: 112 NSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM 171
N + N L+S Y K G+++EA K+F M +R++VSW++++ YV+ GK A +F +M
Sbjct: 78 NIISWNGLVSGYMKNGEIDEARKVFDLMP-ERNVVSWTALVKGYVHNGKVDVAESLFWKM 136
Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK-GS 230
E N+ ++ ++ + +Y + D D ++I K G
Sbjct: 137 PE----KNKVSWTVMLIGFLQDGRIDDACKLYEMIP-----DKDNIARTSMIHGLCKEGR 187
Query: 231 VDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVV 290
VD A ++FD+M+E++ + WT M+T Q DA ++F +P++ +S
Sbjct: 188 VD--EAREIFDEMSERSVITWTTMVTGYGQNNRVDDARKIF------DVMPEKTEVSWTS 239
Query: 291 SACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDH 350
++ +G+ + + + + + C+ M + G + +R+VFD M +
Sbjct: 240 MLMGYVQ---NGRIEDAEELFEVMPVKPVIACNA--MISGLGQKGEIAKARRVFDSMKER 294
Query: 351 NVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQV 410
N SW +I + + G + EA+ LF M + V P T S+L C +L + +QV
Sbjct: 295 NDASWQTVIKIH-ERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQV 353
Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNS 470
+ V+ +D V + L++MY + G + ++ F+ K+++ +N+++ YA +
Sbjct: 354 HAQLVRCQFDVDVYVASVLMTMYIKCGELVKSKLIFDRFPSKDIIMWNSIISGYASHGLG 413
Query: 471 EKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQIHARIIKS-GFESNHCIYN 528
E+A ++ E+ +G + TF + LS S G + +G +I+ + G + Y
Sbjct: 414 EEALKVFCEMPLSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYA 473
Query: 529 ALISMYSRCANVEAAFQVFKEME-DRNVISWTSMITGFAKHGFAARALEIFYKMLADGIK 587
++ M R A ++ M + + W S++ H A E K L +
Sbjct: 474 CMVDMLGRAGRFNEAMEMIDSMTVEPDAAVWGSLLGACRTHSQLDVA-EFCAKKLIEIEP 532
Query: 588 PNGITYI 594
N TYI
Sbjct: 533 ENSGTYI 539
Score = 81.6 bits (200), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 97/208 (46%), Gaps = 4/208 (1%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
H +G +A+ LM ++G P T +L C + H GK VH+ L R + + +
Sbjct: 306 HERNGFELEALDLFILMQKQGVRPTFPTLISILSVCASLASLHHGKQVHAQLVRCQFDVD 365
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEM- 171
+ + L+++Y KCG+L ++ IF +K DI+ W+S+IS Y + G +A+ +F EM
Sbjct: 366 VYVASVLMTMYIKCGELVKSKLIFDRFPSK-DIIMWNSIISGYASHGLGEEALKVFCEMP 424
Query: 172 LELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV 231
L PNE F A + ACS V G IY + ++DM +
Sbjct: 425 LSGSTKPNEVTFVATLSACSYAGMVEEGLKIYESMESVFGVKPITAHYACMVDMLGRAG- 483
Query: 232 DLESAYKVFDKMT-EKNTVGWTLMITRC 258
A ++ D MT E + W ++ C
Sbjct: 484 RFNEAMEMIDSMTVEPDAAVWGSLLGAC 511
>sp|Q9FWA6|PP207_ARATH Pentatricopeptide repeat-containing protein At3g02330
OS=Arabidopsis thaliana GN=PCMP-E90 PE=2 SV=2
Length = 903
Score = 445 bits (1145), Expect = e-124, Method: Compositional matrix adjust.
Identities = 253/761 (33%), Positives = 435/761 (57%), Gaps = 37/761 (4%)
Query: 53 HLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPN 112
+L +G K+I M ++G D T++++LK C + LG +H ++ R + +
Sbjct: 155 YLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVVRVGCDTD 214
Query: 113 SVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEML 172
V ++L+ +Y+K E+ ++F+ + K VSWS++I+ V A+ F EM
Sbjct: 215 VVAASALLDMYAKGKRFVESLRVFQGIPEKNS-VSWSAIIAGCVQNNLLSLALKFFKEMQ 273
Query: 173 ELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVD 232
++ ++ +++V+R+C+ + +G ++ LK F +D V A +DM+ K +
Sbjct: 274 KVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSD-FAADGIVRTATLDMYAKCD-N 331
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
++ A +FD N + MIT +Q A+ LF ++ SG D +LSGV A
Sbjct: 332 MQDAQILFDNSENLNRQSYNAMITGYSQEEHGFKALLLFHRLMSSGLGFDEISLSGVFRA 391
Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
C+ ++ + G Q++ AI++ L+LDVCV + +DMY KC ++ ++ +VFD M +
Sbjct: 392 CALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQ---ALAEAFRVFDEMRRRDA 448
Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--GNLLDSNVAEQV 410
+SW AII + Q+G + E + LF M++ ++ P+ FTF S+LKAC G+L ++
Sbjct: 449 VSWNAIIAAHEQNG-KGYETLFLFVSMLRSRIEPDEFTFGSILKACTGGSL---GYGMEI 504
Query: 411 YTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKN----------------- 453
++ VK G A + VG SLI MY++ G +E+A K F++
Sbjct: 505 HSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMHNKRL 564
Query: 454 ---LVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQ 510
VS+N+++ Y SE A L + + G+ +T+A++L +++ + G G+Q
Sbjct: 565 QEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTCANLASAGLGKQ 624
Query: 511 IHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGF 570
IHA++IK +S+ I + L+ MYS+C ++ + +F++ R+ ++W +MI G+A HG
Sbjct: 625 IHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKSLRRDFVTWNAMICGYAHHGK 684
Query: 571 AARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
A+++F +M+ + IKPN +T+I++L AC+H GLI +G ++F M ++G+ ++ HY+
Sbjct: 685 GEEAIQLFERMILENIKPNHVTFISILRACAHMGLIDKGLEYFYMMKRDYGLDPQLPHYS 744
Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVH-GDTELGKHAAEMILEQDP 689
MVD+LG+SG + ALE IR MP AD ++WRT LG C +H + E+ + A +L DP
Sbjct: 745 NMVDILGKSGKVKRALELIREMPFEADDVIWRTLLGVCTIHRNNVEVAEEATAALLRLDP 804
Query: 690 QDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHP 749
QD +A+ LLSN+YA AG WE V+++R+ M+ L KE GCSW+E +++H F VG+ +HP
Sbjct: 805 QDSSAYTLLSNVYADAGMWEKVSDLRRNMRGFKLKKEPGCSWVELKDELHVFLVGDKAHP 864
Query: 750 KTLEIYAELDQLALKIKEFGYLPDTNFVLH-ELEEEQKVQY 789
+ EIY EL + ++K F D++FV E+EEE + Y
Sbjct: 865 RWEEIYEELGLIYSEMKPF---DDSSFVRGVEVEEEDQWCY 902
Score = 260 bits (665), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 190/682 (27%), Positives = 326/682 (47%), Gaps = 65/682 (9%)
Query: 58 RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
RV + D + Q N +S + K C + LGK H+ + S P + +LN
Sbjct: 29 RVPSFSYFTDFLNQV-NSVSTTNFSFVFKECAKQGALELGKQAHAHMIISGFRPTTFVLN 87
Query: 118 SLISLYSKCGDLNEANKIFKSMG-------NK-----------------------RDIVS 147
L+ +Y+ D A+ +F M NK RD+VS
Sbjct: 88 CLLQVYTNSRDFVSASMVFDKMPLRDVVSWNKMINGYSKSNDMFKANSFFNMMPVRDVVS 147
Query: 148 WSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLL 207
W+SM+S Y+ G+ + +I +FV+M G + F+ +++ CS E+ ++G I+G ++
Sbjct: 148 WNSMLSGYLQNGESLKSIEVFVDMGREGIEFDGRTFAIILKVCSFLEDTSLGMQIHGIVV 207
Query: 208 KCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDA 267
+ G D+DV AL+DM+ KG +ES +VF + EKN+V W+ +I C Q A
Sbjct: 208 RVGC-DTDVVAASALLDMYAKGKRFVES-LRVFQGIPEKNSVSWSAIIAGCVQNNLLSLA 265
Query: 268 IRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDM 327
++ F +M + + V+ +C+ L G QLH+ A+++ A D V + +DM
Sbjct: 266 LKFFKEMQKVNAGVSQSIYASVLRSCAALSELRLGGQLHAHALKSDFAADGIVRTATLDM 325
Query: 328 YAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPN 387
YAKC ++ D++ +FD + N S+ A+ITGY Q K A+ LF ++ + +
Sbjct: 326 YAKCD---NMQDAQILFDNSENLNRQSYNAMITGYSQEEHGFK-ALLLFHRLMSSGLGFD 381
Query: 388 HFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFE 447
+ + V +AC + + Q+Y A+K +LD CV N+ I MY + + +A + F+
Sbjct: 382 EISLSGVFRACALVKGLSEGLQIYGLAIKSSLSLDVCVANAAIDMYGKCQALAEAFRVFD 441
Query: 448 SLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGK 507
+ ++ VS+N ++ A+ +N + L + + + +TF S+L + G++G
Sbjct: 442 EMRRRDAVSWNAIIAAHEQNGKGYETLFLFVSMLRSRIEPDEFTFGSILKACTG-GSLGY 500
Query: 508 GEQIHARIIKSGFESNHCIYNALISMYSRC----------------ANVEAAFQVFKEME 551
G +IH+ I+KSG SN + +LI MYS+C ANV + ++M
Sbjct: 501 GMEIHSSIVKSGMASNSSVGCSLIDMYSKCGMIEEAEKIHSRFFQRANVSGTMEELEKMH 560
Query: 552 DRNV----ISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLIS 607
++ + +SW S+I+G+ + A +F +M+ GI P+ TY VL C A L S
Sbjct: 561 NKRLQEMCVSWNSIISGYVMKEQSEDAQMLFTRMMEMGITPDKFTYATVLDTC--ANLAS 618
Query: 608 EGW-KHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEA-LEFIRSMPLSADVLVWRTFL 665
G K + + + + + +VD+ + G L ++ L F +S L D + W +
Sbjct: 619 AGLGKQIHAQVIKKELQSDVYICSTLVDMYSKCGDLHDSRLMFEKS--LRRDFVTWNAMI 676
Query: 666 GACRVHGDTELGKHAAE-MILE 686
HG E E MILE
Sbjct: 677 CGYAHHGKGEEAIQLFERMILE 698
>sp|Q9FLX6|PP430_ARATH Pentatricopeptide repeat-containing protein At5g52850,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H31 PE=2
SV=1
Length = 893
Score = 441 bits (1134), Expect = e-122, Method: Compositional matrix adjust.
Identities = 260/800 (32%), Positives = 434/800 (54%), Gaps = 26/800 (3%)
Query: 62 AIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLIS 121
A+ + M G HP+ T+S +++SC R+ G VH + ++ E NSV+ +SL
Sbjct: 108 ALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDISYGGRVHGSVIKTGFEGNSVVGSSLSD 167
Query: 122 LYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEY 181
LYSKCG EA ++F S+ N D +SW+ MISS V K +A+ + EM++ G PNE+
Sbjct: 168 LYSKCGQFKEACELFSSLQNA-DTISWTMMISSLVGARKWREALQFYSEMVKAGVPPNEF 226
Query: 182 CFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFD 241
F ++ A S+ + G I+ ++ G +V + +L+D + + S +E A +V +
Sbjct: 227 TFVKLLGA-SSFLGLEFGKTIHSNIIVRG-IPLNVVLKTSLVDFYSQFS-KMEDAVRVLN 283
Query: 242 KMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTS 301
E++ WT +++ + ++A+ FL+M G P+ FT S ++S CS +
Sbjct: 284 SSGEQDVFLWTSVVSGFVRNLRAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDF 343
Query: 302 GKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITG 361
GKQ+HS I+ G VG +LVDMY KC+ S ++ +VF M+ NV+SWT +I G
Sbjct: 344 GKQIHSQTIKVGFEDSTDVGNALVDMYMKCS--ASEVEASRVFGAMVSPNVVSWTTLILG 401
Query: 362 YVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRAL 421
V G ++ L +M++ +V PN T + VL+AC L +++ + ++R
Sbjct: 402 LVDHGFV-QDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRHVDG 460
Query: 422 DDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIE 481
+ VGNSL+ YA S +++ A S+ ++ ++Y ++V + + E A +++ +
Sbjct: 461 EMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMY 520
Query: 482 DTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVE 541
G+ + +S ++++GA+ G+ +H +KSGF + N+L+ MYS+C ++E
Sbjct: 521 GDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKCGSLE 580
Query: 542 AAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS 601
A +VF+E+ +V+SW +++G A +GF + AL F +M +P+ +T++ +LSACS
Sbjct: 581 DAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFLILLSACS 640
Query: 602 HAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVW 661
+ L G ++F+ M + I ++EHY +V +LGR+G L EA + +M L + +++
Sbjct: 641 NGRLTDLGLEYFQVMKKIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIF 700
Query: 662 RTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKER 721
+T L ACR G+ LG+ A L P DPA +ILL++LY +G E R M E+
Sbjct: 701 KTLLRACRYRGNLSLGEDMANKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEK 760
Query: 722 NLIKEAGCSWIEADNKVHKFHVGE--TSHPKTLEIYAELDQLALKIKEFG--YLPDTNFV 777
L K+ G S +E KVH F V E T KT IYAE++ + +IK FG Y + N
Sbjct: 761 RLSKKLGKSTVEVQGKVHSF-VSEDVTRVDKTNGIYAEIESIKEEIKRFGSPYRGNENAS 819
Query: 778 LHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGR 837
HS K AV +G I S P+ V KN +C DCH + ++ + +
Sbjct: 820 F--------------HSAKQAVVYGFIYASPEAPVHVVKNKILCKDCHEFVSILTRLVDK 865
Query: 838 EIVLRDSNRFHHIKDGKCSC 857
+I +RD N+ H K+G+CSC
Sbjct: 866 KITVRDGNQVHIFKNGECSC 885
Score = 255 bits (652), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 171/625 (27%), Positives = 323/625 (51%), Gaps = 19/625 (3%)
Query: 84 LLKSCIRSRNF------HLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFK 137
L KSCIR +F +G +H + + L N + N+L+SLY K + A K+F
Sbjct: 23 LQKSCIRILSFCESNSSRIGLHIHCPVIKFGLLENLDLCNNLLSLYLKTDGIWNARKLFD 82
Query: 138 SMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVA 197
M + R + +W+ MIS++ + A+ +F EM+ G PNE+ FS+V+R+C+ +++
Sbjct: 83 EMSH-RTVFAWTVMISAFTKSQEFASALSLFEEMMASGTHPNEFTFSSVVRSCAGLRDIS 141
Query: 198 IGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITR 257
G ++G ++K G F+ + VG +L D++ K + A ++F + +T+ WT+MI+
Sbjct: 142 YGGRVHGSVIKTG-FEGNSVVGSSLSDLYSKCG-QFKEACELFSSLQNADTISWTMMISS 199
Query: 258 CTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALD 317
R+A++ + +M+ +G P+ FT ++ A S L L GK +HS I G+ L+
Sbjct: 200 LVGARKWREALQFYSEMVKAGVPPNEFTFVKLLGASSFLGL-EFGKTIHSNIIVRGIPLN 258
Query: 318 VCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFS 377
V + SLVD Y++ + ++D+ +V + + +V WT++++G+V++ R KEAV F
Sbjct: 259 VVLKTSLVDFYSQFS---KMEDAVRVLNSSGEQDVFLWTSVVSGFVRN-LRAKEAVGTFL 314
Query: 378 DMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSG 437
+M + PN+FT++++L C + + +Q+++ +K G VGN+L+ MY +
Sbjct: 315 EMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGNALVDMYMKCS 374
Query: 438 RME-DARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLL 496
E +A + F ++ N+VS+ T++ + + F LL E+ V + T + +L
Sbjct: 375 ASEVEASRVFGAMVSPNVVSWTTLILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVL 434
Query: 497 SGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVI 556
S + + + +IHA +++ + + N+L+ Y+ V+ A+ V + M+ R+ I
Sbjct: 435 RACSKLRHVRRVLEIHAYLLRRHVDGEMVVGNSLVDAYASSRKVDYAWNVIRSMKRRDNI 494
Query: 557 SWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSM 616
++TS++T F + G AL + M DGI+ + ++ +SA ++ G + G KH
Sbjct: 495 TYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANLGALETG-KHLHCY 553
Query: 617 YDEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHG--DT 674
+ G +VD+ + GSL +A + + + DV+ W + +G +
Sbjct: 554 SVKSGFSGAASVLNSLVDMYSKCGSLEDAKKVFEEIA-TPDVVSWNGLVSGLASNGFISS 612
Query: 675 ELGKHAAEMILEQDPQDPAAHILLS 699
L + E +P ILLS
Sbjct: 613 ALSAFEEMRMKETEPDSVTFLILLS 637
Score = 181 bits (459), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 122/418 (29%), Positives = 225/418 (53%), Gaps = 14/418 (3%)
Query: 58 RVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILN 117
R ++A+ T M G P+ TYS +L C R+ GK +HS + E ++ + N
Sbjct: 305 RAKEAVGTFLEMRSLGLQPNNFTYSAILSLCSAVRSLDFGKQIHSQTIKVGFEDSTDVGN 364
Query: 118 SLISLYSKCGDLN-EANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGF 176
+L+ +Y KC EA+++F +M + ++VSW+++I V+ G D + +EM++
Sbjct: 365 ALVDMYMKCSASEVEASRVFGAMVSP-NVVSWTTLILGLVDHGFVQDCFGLLMEMVKREV 423
Query: 177 CPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESA 236
PN S V+RACS +V I+ +LL+ + D ++ VG +L+D + S ++ A
Sbjct: 424 EPNVVTLSGVLRACSKLRHVRRVLEIHAYLLR-RHVDGEMVVGNSLVDAYAS-SRKVDYA 481
Query: 237 YKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSEL 296
+ V M ++ + +T ++TR +LG A+ + M G D+ +L G +SA + L
Sbjct: 482 WNVIRSMKRRDNITYTSLVTRFNELGKHEMALSVINYMYGDGIRMDQLSLPGFISASANL 541
Query: 297 ELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWT 356
+GK LH +++++G + V SLVDMY+KC GS++D++KVF+ + +V+SW
Sbjct: 542 GALETGKHLHCYSVKSGFSGAASVLNSLVDMYSKC---GSLEDAKKVFEEIATPDVVSWN 598
Query: 357 AIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVK 416
+++G + S G A+ F +M + P+ TF +L AC N +++ + Y +K
Sbjct: 599 GLVSG-LASNGFISSALSAFEEMRMKETEPDSVTFLILLSACSNGRLTDLGLE-YFQVMK 656
Query: 417 RGRALDDCVGN--SLISMYARSGRMEDARKAFESL-FEKNLVSYNTMVDA--YAKNLN 469
+ ++ V + L+ + R+GR+E+A E++ + N + + T++ A Y NL+
Sbjct: 657 KIYNIEPQVEHYVHLVGILGRAGRLEEATGVVETMHLKPNAMIFKTLLRACRYRGNLS 714
Score = 87.8 bits (216), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 105/414 (25%), Positives = 185/414 (44%), Gaps = 58/414 (14%)
Query: 50 LIYHLND-GRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSK 108
LI L D G VQ L M ++ P++ T S +L++C + R+ +H+ L R
Sbjct: 398 LILGLVDHGFVQDCFGLLMEMVKREVEPNVVTLSGVLRACSKLRHVRRVLEIHAYLLRRH 457
Query: 109 LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMF 168
++ V+ NSL+ Y+ ++ A + +SM +RD ++++S+++ + GK A+ +
Sbjct: 458 VDGEMVVGNSLVDAYASSRKVDYAWNVIRSM-KRRDNITYTSLVTRFNELGKHEMALSVI 516
Query: 169 VEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVK 228
M G ++ I A +N + G ++ + +K G F V +L+DM+ K
Sbjct: 517 NYMYGDGIRMDQLSLPGFISASANLGALETGKHLHCYSVKSG-FSGAASVLNSLVDMYSK 575
Query: 229 -GSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLS 287
GS LE A KVF+++ + V W +++ G A+ F +M + PD T
Sbjct: 576 CGS--LEDAKKVFEEIATPDVVSWNGLVSGLASNGFISSALSAFEEMRMKETEPDSVTFL 633
Query: 288 GVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRM 347
++SACS L T L L+ Y + +K+++
Sbjct: 634 ILLSACSNGRL-------------TDLGLE----------YFQVM--------KKIYN-- 660
Query: 348 LDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC---GNL-LD 403
++ V + ++ G + GR +EA + M + PN F ++L+AC GNL L
Sbjct: 661 IEPQVEHYVHLV-GILGRAGRLEEATGVVETM---HLKPNAMIFKTLLRACRYRGNLSLG 716
Query: 404 SNVAEQVYTHAVKRGRAL---DDCVGNSLISMYARSGRMEDARKAFESLFEKNL 454
++A +G AL D + L +Y SG+ E A+K + EK L
Sbjct: 717 EDMA--------NKGLALAPSDPALYILLADLYDESGKPELAQKTRNLMTEKRL 762
>sp|Q9SR82|PP219_ARATH Putative pentatricopeptide repeat-containing protein At3g08820
OS=Arabidopsis thaliana GN=PCMP-H84 PE=3 SV=1
Length = 685
Score = 440 bits (1131), Expect = e-122, Method: Compositional matrix adjust.
Identities = 220/596 (36%), Positives = 354/596 (59%), Gaps = 4/596 (0%)
Query: 266 DAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLV 325
+ + LFL + G FT V+ AC+ G LHS ++ G DV SL+
Sbjct: 94 ETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLHSLVVKCGFNHDVAAMTSLL 153
Query: 326 DMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVA 385
+Y+ G ++D+ K+FD + D +V++WTA+ +GY SG R +EA+ LF M++ V
Sbjct: 154 SIYSG---SGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSG-RHREAIDLFKKMVEMGVK 209
Query: 386 PNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKA 445
P+ + VL AC ++ D + E + + + + V +L+++YA+ G+ME AR
Sbjct: 210 PDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLVNLYAKCGKMEKARSV 269
Query: 446 FESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAI 505
F+S+ EK++V+++TM+ YA N ++ EL ++ + ++ LS +S+GA+
Sbjct: 270 FDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKPDQFSIVGFLSSCASLGAL 329
Query: 506 GKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGF 565
GE + I + F +N + NALI MY++C + F+VFKEM++++++ + I+G
Sbjct: 330 DLGEWGISLIDRHEFLTNLFMANALIDMYAKCGAMARGFEVFKEMKEKDIVIMNAAISGL 389
Query: 566 AKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQR 625
AK+G + +F + GI P+G T++ +L C HAGLI +G + F ++ + + +
Sbjct: 390 AKNGHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHAGLIQDGLRFFNAISCVYALKRT 449
Query: 626 MEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMIL 685
+EHY CMVDL GR+G L +A I MP+ + +VW L CR+ DT+L + + ++
Sbjct: 450 VEHYGCMVDLWGRAGMLDDAYRLICDMPMRPNAIVWGALLSGCRLVKDTQLAETVLKELI 509
Query: 686 EQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE 745
+P + ++ LSN+Y+ G W+ A +R M ++ + K G SWIE + KVH+F +
Sbjct: 510 ALEPWNAGNYVQLSNIYSVGGRWDEAAEVRDMMNKKGMKKIPGYSWIELEGKVHEFLADD 569
Query: 746 TSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLIS 805
SHP + +IYA+L+ L +++ G++P T FV ++EEE+K + L HSEK+AVA GLIS
Sbjct: 570 KSHPLSDKIYAKLEDLGNEMRLMGFVPTTEFVFFDVEEEEKERVLGYHSEKLAVALGLIS 629
Query: 806 TSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
T + IRV KNLRVCGDCH +K IS +T REIV+RD+NRFH +G CSCNDYW
Sbjct: 630 TDHGQVIRVVKNLRVCGDCHEVMKLISKITRREIVVRDNNRFHCFTNGSCSCNDYW 685
Score = 160 bits (406), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 118/410 (28%), Positives = 211/410 (51%), Gaps = 26/410 (6%)
Query: 48 NRLIYH-LNDGRVQKAIF--TLDL---MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVH 101
N +Y+ L +G V +F TLDL + + G + T+ L+LK+C R+ + LG +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 102 SLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQ 161
SL+ + + + SL+S+YS G LN+A+K+F + + R +V+W+++ S Y G+
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPD-RSVVTWTALFSGYTTSGRH 193
Query: 162 VDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCA 221
+AI +F +M+E+G P+ Y V+ AC + ++ G I ++ + + V
Sbjct: 194 REAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEME-MQKNSFVRTT 252
Query: 222 LIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLP 281
L++++ K +E A VFD M EK+ V W+ MI P++ I LFL M+ P
Sbjct: 253 LVNLYAKCG-KMEKARSVFDSMVEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENLKP 311
Query: 282 DRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSR 341
D+F++ G +S+C+ L G+ S R ++ + +L+DMYAKC G++
Sbjct: 312 DQFSIVGFLSSCASLGALDLGEWGISLIDRHEFLTNLFMANALIDMYAKC---GAMARGF 368
Query: 342 KVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKAC--- 398
+VF M + +++ A I+G ++ G K + +F + ++P+ TF +L C
Sbjct: 369 EVFKEMKEKDIVIMNAAISGLAKN-GHVKLSFAVFGQTEKLGISPDGSTFLGLLCGCVHA 427
Query: 399 GNLLDS----NVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARK 444
G + D N VY A+KR C ++ ++ R+G ++DA +
Sbjct: 428 GLIQDGLRFFNAISCVY--ALKRTVEHYGC----MVDLWGRAGMLDDAYR 471
Score = 103 bits (256), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 73/314 (23%), Positives = 138/314 (43%), Gaps = 50/314 (15%)
Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIH 512
N+ YN++++ + N + +L I G+ +TF +L + + G +H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 513 ARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAA 572
+ ++K GF + +L+S+YS + A ++F E+ DR+V++WT++ +G+ G
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 573 RALEIFYKMLADGIKPNGITYIAVLSACSHAGLISEG-W--KHFRSMYDEHGIVQRMEHY 629
A+++F KM+ G+KP+ + VLSAC H G + G W K+ M + R
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVR---- 250
Query: 630 ACMVDLLGRSGSLTEALEFIRSMPLSADVLVWRT-------------------------- 663
+V+L + G + +A SM + D++ W T
Sbjct: 251 TTLVNLYAKCGKMEKARSVFDSM-VEKDIVTWSTMIQGYASNSFPKEGIELFLQMLQENL 309
Query: 664 ---------FLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSN----LYASAGHWEY 710
FL +C G +LG+ +I D + ++ ++N +YA G
Sbjct: 310 KPDQFSIVGFLSSCASLGALDLGEWGISLI---DRHEFLTNLFMANALIDMYAKCGAMAR 366
Query: 711 VANIRKRMKERNLI 724
+ K MKE++++
Sbjct: 367 GFEVFKEMKEKDIV 380
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 64/310 (20%), Positives = 122/310 (39%), Gaps = 48/310 (15%)
Query: 494 SLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDR 553
+L+S A ++ + +QIH +I + + N L+ + ++ +F +
Sbjct: 18 TLISVACTVNHL---KQIHVSLINHHLHHDTFLVNLLLKRTLFFRQTKYSYLLFSHTQFP 74
Query: 554 NVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACS-----------H 602
N+ + S+I GF + L++F + G+ +G T+ VL AC+ H
Sbjct: 75 NIFLYNSLINGFVNNHLFHETLDLFLSIRKHGLYLHGFTFPLVLKACTRASSRKLGIDLH 134
Query: 603 AGLISEGWKH-------FRSMY-------DEHGIVQRMEH-----YACMVDLLGRSGSLT 643
+ ++ G+ H S+Y D H + + + + SG
Sbjct: 135 SLVVKCGFNHDVAAMTSLLSIYSGSGRLNDAHKLFDEIPDRSVVTWTALFSGYTTSGRHR 194
Query: 644 EALEFIR---SMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ-DPAAHILLS 699
EA++ + M + D L AC GD + G+ + + E + Q + L
Sbjct: 195 EAIDLFKKMVEMGVKPDSYFIVQVLSACVHVGDLDSGEWIVKYMEEMEMQKNSFVRTTLV 254
Query: 700 NLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPKT-LEIYAEL 758
NLYA G E ++ M E++++ + A N S PK +E++ ++
Sbjct: 255 NLYAKCGKMEKARSVFDSMVEKDIVTWSTMIQGYASN----------SFPKEGIELFLQM 304
Query: 759 DQLALKIKEF 768
Q LK +F
Sbjct: 305 LQENLKPDQF 314
>sp|Q9SZT8|PP354_ARATH Pentatricopeptide repeat-containing protein At4g37380,
chloroplastic OS=Arabidopsis thaliana GN=PCMP-H48 PE=3
SV=1
Length = 632
Score = 438 bits (1127), Expect = e-122, Method: Compositional matrix adjust.
Identities = 226/591 (38%), Positives = 346/591 (58%), Gaps = 38/591 (6%)
Query: 304 QLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGYV 363
Q+H+ +R L L + ++ G + S +F + +D ++ +TA I
Sbjct: 47 QIHAAILRHNLLLHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDPDLFLFTAAINTAS 106
Query: 364 QSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALDD 423
+G +D +A L+ ++ ++ PN FTF+S+LK+C + + ++TH +K G +D
Sbjct: 107 INGLKD-QAFLLYVQLLSSEINPNEFTFSSLLKSC----STKSGKLIHTHVLKFGLGIDP 161
Query: 424 CVGNSL-------------------------------ISMYARSGRMEDARKAFESLFEK 452
V L I+ YA+ G +E AR F+S+ E+
Sbjct: 162 YVATGLVDVYAKGGDVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALFDSMCER 221
Query: 453 NLVSYNTMVDAYAKNLNSEKAFELLHEIEDTG-VGTSAYTFASLLSGASSIGAIGKGEQI 511
++VS+N M+D YA++ A L ++ G T + LS S IGA+ G I
Sbjct: 222 DIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGALETGRWI 281
Query: 512 HARIIKSGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFA 571
H + S N + LI MYS+C ++E A VF + +++++W +MI G+A HG++
Sbjct: 282 HVFVKSSRIRLNVKVCTGLIDMYSKCGSLEEAVLVFNDTPRKDIVAWNAMIAGYAMHGYS 341
Query: 572 ARALEIFYKMLA-DGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYA 630
AL +F +M G++P IT+I L AC+HAGL++EG + F SM E+GI ++EHY
Sbjct: 342 QDALRLFNEMQGITGLQPTDITFIGTLQACAHAGLVNEGIRIFESMGQEYGIKPKIEHYG 401
Query: 631 CMVDLLGRSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQ 690
C+V LLGR+G L A E I++M + AD ++W + LG+C++HGD LGK AE ++ + +
Sbjct: 402 CLVSLLGRAGQLKRAYETIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK 461
Query: 691 DPAAHILLSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGETSHPK 750
+ ++LLSN+YAS G +E VA +R MKE+ ++KE G S IE +NKVH+F G+ H K
Sbjct: 462 NSGIYVLLSNIYASVGDYEGVAKVRNLMKEKGIVKEPGISTIEIENKVHEFRAGDREHSK 521
Query: 751 TLEIYAELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSK 810
+ EIY L +++ +IK GY+P+TN VL +LEE +K Q L HSE++A+A+GLIST
Sbjct: 522 SKEIYTMLRKISERIKSHGYVPNTNTVLQDLEETEKEQSLQVHSERLAIAYGLISTKPGS 581
Query: 811 PIRVFKNLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
P+++FKNLRVC DCHT K IS +TGR+IV+RD NRFHH DG CSC D+W
Sbjct: 582 PLKIFKNLRVCSDCHTVTKLISKITGRKIVMRDRNRFHHFTDGSCSCGDFW 632
Score = 134 bits (336), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 122/504 (24%), Positives = 224/504 (44%), Gaps = 95/504 (18%)
Query: 93 NFHLGKLVHSLLTRSKLEPNSVILN-SLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSM 151
H L H+LL L P +LN L Y+ G + + +F + D+ +++
Sbjct: 47 QIHAAILRHNLL----LHPRYPVLNLKLHRAYASHGKIRHSLALFHQTIDP-DLFLFTAA 101
Query: 152 ISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGY 211
I++ G + A ++V++L PNE+ FS+++++CS G +I+ +LK G
Sbjct: 102 INTASINGLKDQAFLLYVQLLSSEINPNEFTFSSLLKSCSTKS----GKLIHTHVLKFG- 156
Query: 212 FDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEK------------------------- 246
D V L+D++ KG D+ SA KVFD+M E+
Sbjct: 157 LGIDPYVATGLVDVYAKGG-DVVSAQKVFDRMPERSLVSSTAMITCYAKQGNVEAARALF 215
Query: 247 ------NTVGWTLMITRCTQLGCPRDAIRLFLDMILSGF-LPDRFTLSGVVSACSELELF 299
+ V W +MI Q G P DA+ LF ++ G PD T+ +SACS++
Sbjct: 216 DSMCERDIVSWNVMIDGYAQHGFPNDALMLFQKLLAEGKPKPDEITVVAALSACSQIGAL 275
Query: 300 TSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAII 359
+G+ +H + + + L+V V L+DMY+KC GS++++ VF+ ++++W A+I
Sbjct: 276 ETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKC---GSLEEAVLVFNDTPRKDIVAWNAMI 332
Query: 360 TGYVQSGGRDKEAVKLFSDMIQG--QVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKR 417
GY G ++A++LF++M QG + P TF L+AC
Sbjct: 333 AGYAMH-GYSQDALRLFNEM-QGITGLQPTDITFIGTLQAC------------------- 371
Query: 418 GRALDDCVGNSLISMYARSGRMEDARKAFESL-----FEKNLVSYNTMVDAYAKNLNSEK 472
A +G + + + FES+ + + Y +V + ++
Sbjct: 372 ----------------AHAGLVNEGIRIFESMGQEYGIKPKIEHYGCLVSLLGRAGQLKR 415
Query: 473 AFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALIS 532
A+E I++ + + ++S+L G G++I +I + N IY L +
Sbjct: 416 AYE---TIKNMNMDADSVLWSSVLGSCKLHGDFVLGKEIAEYLIGLNIK-NSGIYVLLSN 471
Query: 533 MYSRCANVEAAFQVFKEMEDRNVI 556
+Y+ + E +V M+++ ++
Sbjct: 472 IYASVGDYEGVAKVRNLMKEKGIV 495
Score = 75.9 bits (185), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 55/200 (27%), Positives = 94/200 (47%), Gaps = 18/200 (9%)
Query: 68 LMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCG 127
L+ + PD T L +C + G+ +H + S++ N + LI +YSKCG
Sbjct: 249 LLAEGKPKPDEITVVAALSACSQIGALETGRWIHVFVKSSRIRLNVKVCTGLIDMYSKCG 308
Query: 128 DLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLEL-GFCPNEYCFSAV 186
L EA +F ++DIV+W++MI+ Y G DA+ +F EM + G P + F
Sbjct: 309 SLEEAVLVFNDT-PRKDIVAWNAMIAGYAMHGYSQDALRLFNEMQGITGLQPTDITFIGT 367
Query: 187 IRACSNTENVAIGHII-------YGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKV 239
++AC++ V G I YG K ++ GC L+ + + L+ AY+
Sbjct: 368 LQACAHAGLVNEGIRIFESMGQEYGIKPKIEHY------GC-LVSLLGRAG-QLKRAYET 419
Query: 240 FDKMT-EKNTVGWTLMITRC 258
M + ++V W+ ++ C
Sbjct: 420 IKNMNMDADSVLWSSVLGSC 439
>sp|Q9FXB9|PPR84_ARATH Pentatricopeptide repeat-containing protein At1g56690,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H69 PE=2
SV=1
Length = 704
Score = 434 bits (1116), Expect = e-120, Method: Compositional matrix adjust.
Identities = 258/765 (33%), Positives = 404/765 (52%), Gaps = 63/765 (8%)
Query: 98 KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
K + +L R+ L V + IS S+ G +NEA K F S+ K I SW+S++S Y +
Sbjct: 2 KRLKLILRRTYLTSTGVNCSFEISRLSRIGKINEARKFFDSLQFK-AIGSWNSIVSGYFS 60
Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
G +A +F EM E +V
Sbjct: 61 NGLPKEARQLFDEMSE----------------------------------------RNVV 80
Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
L+ ++K + +E A VF+ M E+N V WT M+ Q G +A LF M
Sbjct: 81 SWNGLVSGYIKNRMIVE-ARNVFELMPERNVVSWTAMVKGYMQEGMVGEAESLFWRM--- 136
Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
P+R +S V L G+ + + + + V + +M +G V
Sbjct: 137 ---PERNEVSWTVMFGG---LIDDGRIDKARKLYDMMPVKDVVAST--NMIGGLCREGRV 188
Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
D++R +FD M + NV++WT +ITGY Q+ R A KLF +V P +
Sbjct: 189 DEARLIFDEMRERNVVTWTTMITGYRQNN-RVDVARKLF------EVMPEKTEVSWTSML 241
Query: 398 CGNLLDSNVAEQVYTHAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVSY 457
G L + + V + + C N++I + G + AR+ F+ + +++ ++
Sbjct: 242 LGYTLSGRIEDAEEFFEVMPMKPVIAC--NAMIVGFGEVGEISKARRVFDLMEDRDNATW 299
Query: 458 NTMVDAYAKNLNSEKAFELLHEIEDTGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIK 517
M+ AY + +A +L +++ GV S + S+LS +++ ++ G Q+HA +++
Sbjct: 300 RGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSVCATLASLQYGRQVHAHLVR 359
Query: 518 SGFESNHCIYNALISMYSRCANVEAAFQVFKEMEDRNVISWTSMITGFAKHGFAARALEI 577
F+ + + + L++MY +C + A VF +++I W S+I+G+A HG AL+I
Sbjct: 360 CQFDDDVYVASVLMTMYVKCGELVKAKLVFDRFSSKDIIMWNSIISGYASHGLGEEALKI 419
Query: 578 FYKMLADGIKPNGITYIAVLSACSHAGLISEGWKHFRSMYDEHGIVQRMEHYACMVDLLG 637
F++M + G PN +T IA+L+ACS+AG + EG + F SM + + +EHY+C VD+LG
Sbjct: 420 FHEMPSSGTMPNKVTLIAILTACSYAGKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLG 479
Query: 638 RSGSLTEALEFIRSMPLSADVLVWRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHIL 697
R+G + +A+E I SM + D VW LGAC+ H +L + AA+ + E +P + ++L
Sbjct: 480 RAGQVDKAMELIESMTIKPDATVWGALLGACKTHSRLDLAEVAAKKLFENEPDNAGTYVL 539
Query: 698 LSNLYASAGHWEYVANIRKRMKERNLIKEAGCSWIEADNKVHKFHVGE-TSHPKTLEIYA 756
LS++ AS W VA +RK M+ N+ K GCSWIE KVH F G +HP+ I
Sbjct: 540 LSSINASRSKWGDVAVVRKNMRTNNVSKFPGCSWIEVGKKVHMFTRGGIKNHPEQAMILM 599
Query: 757 ELDQLALKIKEFGYLPDTNFVLHELEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFK 816
L++ ++E GY PD + VLH+++EE+KV L +HSE++AVA+GL+ + PIRV K
Sbjct: 600 MLEKTDGLLREAGYSPDCSHVLHDVDEEEKVDSLSRHSERLAVAYGLLKLPEGVPIRVMK 659
Query: 817 NLRVCGDCHTAIKYISMVTGREIVLRDSNRFHHIKDGKCSCNDYW 861
NLRVCGDCH AIK IS VT REI+LRD+NRFHH +G+CSC DYW
Sbjct: 660 NLRVCGDCHAAIKLISKVTEREIILRDANRFHHFNNGECSCRDYW 704
Score = 114 bits (284), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 113/454 (24%), Positives = 186/454 (40%), Gaps = 99/454 (21%)
Query: 54 LNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNS 113
++DGR+ KA D+M K D+ + ++ R +L+ + E N
Sbjct: 152 IDDGRIDKARKLYDMMPVK----DVVASTNMIGGLCREGRVDEARLIFDEMR----ERNV 203
Query: 114 VILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLE 173
V ++I+ Y + ++ A K+F+ M K + VSW+SM+ Y G+ DA F E++
Sbjct: 204 VTWTTMITGYRQNNRVDVARKLFEVMPEKTE-VSWTSMLLGYTLSGRIEDA-EEFFEVMP 261
Query: 174 LGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSV-D 232
+ +A +I GF G V +
Sbjct: 262 M------------------KPVIACNAMIVGF-----------------------GEVGE 280
Query: 233 LESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSA 292
+ A +VFD M +++ W MI + G +A+ LF M G P +L ++S
Sbjct: 281 ISKARRVFDLMEDRDNATWRGMIKAYERKGFELEALDLFAQMQKQGVRPSFPSLISILSV 340
Query: 293 CSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNV 352
C+ L G+Q+H+ +R DV V L+ MY KC G + ++ VFDR ++
Sbjct: 341 CATLASLQYGRQVHAHLVRCQFDDDVYVASVLMTMYVKC---GELVKAKLVFDRFSSKDI 397
Query: 353 MSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYT 412
+ W +II+GY S G +EA+K+F +M PN T ++L AC
Sbjct: 398 IMWNSIISGYA-SHGLGEEALKIFHEMPSSGTMPNKVTLIAILTACS------------- 443
Query: 413 HAVKRGRALDDCVGNSLISMYARSGRMEDARKAFESLFEKNLVS-----YNTMVDAYAKN 467
YA G++E+ + FES+ K V+ Y+ VD +
Sbjct: 444 --------------------YA--GKLEEGLEIFESMESKFCVTPTVEHYSCTVDMLGRA 481
Query: 468 LNSEKAFELLHEIEDTGVGTSAYTFASLLSGASS 501
+KA EL IE + A + +LL +
Sbjct: 482 GQVDKAMEL---IESMTIKPDATVWGALLGACKT 512
>sp|Q9ZVF4|PP140_ARATH Pentatricopeptide repeat-containing protein At2g01510,
mitochondrial OS=Arabidopsis thaliana GN=PCMP-H37 PE=3
SV=1
Length = 584
Score = 434 bits (1115), Expect = e-120, Method: Compositional matrix adjust.
Identities = 222/561 (39%), Positives = 337/561 (60%), Gaps = 6/561 (1%)
Query: 303 KQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSVDDSRKVFDRMLDHNVMSWTAIITGY 362
K++H+ +RTG + + L + V G + +R+VFD M + W + GY
Sbjct: 28 KKIHAIVLRTGFSEKNSL---LTQLLENLVVIGDMCYARQVFDEMHKPRIFLWNTLFKGY 84
Query: 363 VQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKACGNLLDSNVAEQVYTHAVKRGRALD 422
V++ E++ L+ M V P+ FT+ V+KA L D + ++ H VK G
Sbjct: 85 VRNQ-LPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCL 143
Query: 423 DCVGNSLISMYARSGRMEDARKAFESLFEKNLVSYNTMVDAYAKNLNSEKAFELLHEIED 482
V L+ MY + G + A FES+ K+LV++N + + NS A E +++
Sbjct: 144 GIVATELVMMYMKFGELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCA 203
Query: 483 TGVGTSAYTFASLLSGASSIGAIGKGEQIHARIIKSGFESNHCIYNALISMYSRCANVEA 542
V ++T S+LS +G++ GE+I+ R K + N + NA + M+ +C N EA
Sbjct: 204 DAVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKCGNTEA 263
Query: 543 AFQVFKEMEDRNVISWTSMITGFAKHGFAARALEIFYKMLADGIKPNGITYIAVLSACSH 602
A +F+EM+ RNV+SW++MI G+A +G + AL +F M +G++PN +T++ VLSACSH
Sbjct: 264 ARVLFEEMKQRNVVSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSH 323
Query: 603 AGLISEGWKHFRSMY--DEHGIVQRMEHYACMVDLLGRSGSLTEALEFIRSMPLSADVLV 660
AGL++EG ++F M ++ + R EHYACMVDLLGRSG L EA EFI+ MP+ D +
Sbjct: 324 AGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGI 383
Query: 661 WRTFLGACRVHGDTELGKHAAEMILEQDPQDPAAHILLSNLYASAGHWEYVANIRKRMKE 720
W LGAC VH D LG+ A++++E P + H+LLSN+YA+AG W+ V +R +M++
Sbjct: 384 WGALLGACAVHRDMILGQKVADVLVETAPDIGSYHVLLSNIYAAAGKWDCVDKVRSKMRK 443
Query: 721 RNLIKEAGCSWIEADNKVHKFHVGETSHPKTLEIYAELDQLALKIKEFGYLPDTNFVLHE 780
K A S +E + K+H F+ G+ SHP++ IY +LD++ KI++ GY+PDT V H+
Sbjct: 444 LGTKKVAAYSSVEFEGKIHFFNRGDKSHPQSKAIYEKLDEILKKIRKMGYVPDTCSVFHD 503
Query: 781 LEEEQKVQYLFQHSEKIAVAFGLISTSKSKPIRVFKNLRVCGDCHTAIKYISMVTGREIV 840
+E E+K L HSEK+A+AFGLI PIRV KNLR C DCH K++S +T EI+
Sbjct: 504 VEMEEKECSLSHHSEKLAIAFGLIKGRPGHPIRVMKNLRTCDDCHAFSKFVSSLTSTEII 563
Query: 841 LRDSNRFHHIKDGKCSCNDYW 861
+RD NRFHH ++G CSC ++W
Sbjct: 564 MRDKNRFHHFRNGVCSCKEFW 584
Score = 137 bits (346), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 92/348 (26%), Positives = 176/348 (50%), Gaps = 10/348 (2%)
Query: 98 KLVHSLLTRSKLEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISSYVN 157
K +H+++ R+ + +L L+ GD+ A ++F M R I W+++ YV
Sbjct: 28 KKIHAIVLRTGFSEKNSLLTQLLENLVVIGDMCYARQVFDEMHKPR-IFLWNTLFKGYVR 86
Query: 158 RGKQVDAIHMFVEMLELGFCPNEYCFSAVIRACSNTENVAIGHIIYGFLLKCGYFDSDVC 217
+++ ++ +M +LG P+E+ + V++A S + + G ++ ++K G F
Sbjct: 87 NQLPFESLLLYKKMRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYG-FGCLGI 145
Query: 218 VGCALIDMFVKGSVDLESAYKVFDKMTEKNTVGWTLMITRCTQLGCPRDAIRLFLDMILS 277
V L+ M++K +L SA +F+ M K+ V W + C Q G A+ F M
Sbjct: 146 VATELVMMYMKFG-ELSSAEFLFESMQVKDLVAWNAFLAVCVQTGNSAIALEYFNKMCAD 204
Query: 278 GFLPDRFTLSGVVSACSELELFTSGKQLHSWAIRTGLALDVCVGCSLVDMYAKCTVDGSV 337
D FT+ ++SAC +L G++++ A + + ++ V + +DM+ KC G+
Sbjct: 205 AVQFDSFTVVSMLSACGQLGSLEIGEEIYDRARKEEIDCNIIVENARLDMHLKC---GNT 261
Query: 338 DDSRKVFDRMLDHNVMSWTAIITGYVQSGGRDKEAVKLFSDMIQGQVAPNHFTFASVLKA 397
+ +R +F+ M NV+SW+ +I GY +G +EA+ LF+ M + PN+ TF VL A
Sbjct: 262 EAARVLFEEMKQRNVVSWSTMIVGYAMNGD-SREALTLFTTMQNEGLRPNYVTFLGVLSA 320
Query: 398 CGNLLDSNVAEQVYTHAVKRG-RALDDCVGN--SLISMYARSGRMEDA 442
C + N ++ ++ V+ + L+ + ++ + RSG +E+A
Sbjct: 321 CSHAGLVNEGKRYFSLMVQSNDKNLEPRKEHYACMVDLLGRSGLLEEA 368
Score = 101 bits (252), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 121/244 (49%), Gaps = 3/244 (1%)
Query: 69 MTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTRSKLEPNSVILNSLISLYSKCGD 128
M G PD TY ++K+ + +F G +H+ + + ++ L+ +Y K G+
Sbjct: 100 MRDLGVRPDEFTYPFVVKAISQLGDFSCGFALHAHVVKYGFGCLGIVATELVMMYMKFGE 159
Query: 129 LNEANKIFKSMGNKRDIVSWSSMISSYVNRGKQVDAIHMFVEMLELGFCPNEYCFSAVIR 188
L+ A +F+SM K D+V+W++ ++ V G A+ F +M + + +++
Sbjct: 160 LSSAEFLFESMQVK-DLVAWNAFLAVCVQTGNSAIALEYFNKMCADAVQFDSFTVVSMLS 218
Query: 189 ACSNTENVAIGHIIYGFLLKCGYFDSDVCVGCALIDMFVKGSVDLESAYKVFDKMTEKNT 248
AC ++ IG IY K D ++ V A +DM +K + E+A +F++M ++N
Sbjct: 219 ACGQLGSLEIGEEIYDRARK-EEIDCNIIVENARLDMHLKCG-NTEAARVLFEEMKQRNV 276
Query: 249 VGWTLMITRCTQLGCPRDAIRLFLDMILSGFLPDRFTLSGVVSACSELELFTSGKQLHSW 308
V W+ MI G R+A+ LF M G P+ T GV+SACS L GK+ S
Sbjct: 277 VSWSTMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSL 336
Query: 309 AIRT 312
+++
Sbjct: 337 MVQS 340
Score = 37.4 bits (85), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 51/111 (45%), Gaps = 3/111 (2%)
Query: 47 SNRLIYHLNDGRVQKAIFTLDLMTQKGNHPDLDTYSLLLKSCIRSRNFHLGKLVHSLLTR 106
S ++ + +G ++A+ M +G P+ T+ +L +C + + GK SL+ +
Sbjct: 280 STMIVGYAMNGDSREALTLFTTMQNEGLRPNYVTFLGVLSACSHAGLVNEGKRYFSLMVQ 339
Query: 107 SK---LEPNSVILNSLISLYSKCGDLNEANKIFKSMGNKRDIVSWSSMISS 154
S LEP ++ L + G L EA + K M + D W +++ +
Sbjct: 340 SNDKNLEPRKEHYACMVDLLGRSGLLEEAYEFIKKMPVEPDTGIWGALLGA 390
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.135 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 312,592,835
Number of Sequences: 539616
Number of extensions: 13092651
Number of successful extensions: 57090
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 419
Number of HSP's successfully gapped in prelim test: 80
Number of HSP's that attempted gapping in prelim test: 44032
Number of HSP's gapped (non-prelim): 3416
length of query: 861
length of database: 191,569,459
effective HSP length: 126
effective length of query: 735
effective length of database: 123,577,843
effective search space: 90829714605
effective search space used: 90829714605
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 66 (30.0 bits)