BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 002976
(861 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80Y81|RNZ2_MOUSE Zinc phosphodiesterase ELAC protein 2 OS=Mus musculus GN=Elac2 PE=1
SV=1
Length = 831
Score = 317 bits (812), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 256/822 (31%), Positives = 366/822 (44%), Gaps = 154/822 (18%)
Query: 62 VLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGD 121
+ +F + R++FN GEG+QR EHK+K++++D+IFL+R+ GGL G++LTL G
Sbjct: 66 LYVFSEYNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGGLCGMILTLKETGL 125
Query: 122 EGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVD- 180
++ GP L+ ++A+K F + P S D + + +
Sbjct: 126 PKCVLS--GPPQLEKYLEAIKIFSGPLKGIE---LAVRPHSAPEYKDETMTVYQVPIHSE 180
Query: 181 --------NELAKISAILLKP-SCSDGSPVKPGETS--------------------VIYV 211
++ + S L P SD + G+ V +V
Sbjct: 181 RRCGKQQPSQSPRTSPNRLSPKQSSDSGSAENGQCPPEDSSAGANRKAWGRDPSLVVAFV 240
Query: 212 CELPEITGKFDPKKAVALGLKPGPKYRE-----LQSGKSVKSDTLDIMVHPSDVLGPSLP 266
C+L G F KA LGL G ++ GKS+ + +I ++ P P
Sbjct: 241 CKLHLRKGNFLVLKAKELGLPVGTAAIAPIIAAVKDGKSITYEGREIAA--EELCTPPDP 298
Query: 267 GPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPVSVTGTSNYQK 326
G + ++V+CP E +L + ++ Y A+ V ++H++P SV S YQ+
Sbjct: 299 GLVFIVVECPDEGFILPICENDTFKRYQAEADA------PVALVVHIAPESVLIDSRYQQ 352
Query: 327 WMKRFG-SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFPASGFWSLPHFNTSAA 385
WM+RFG QH++ +V S +I T+L+ + P +FP L F +
Sbjct: 353 WMERFGPDTQHLILNENCPSVHN---LRSHKIQTQLSLIHPDIFP-----QLTSFYSKEE 404
Query: 386 ESSASEGPVPSICAENLLKFTLRPLANLGIDRTNIPSLEAPSEITNELLSEVPEVVDAAH 445
S+ S VP++ E LLK+ LRP D T L E + A
Sbjct: 405 GSTLS---VPTVRGECLLKYQLRPKREWQRDTT--------------LDCNTDEFIAEAL 447
Query: 446 QISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLDNVRRDDLEIVLLGTGSSQPS 505
++ F + E + + + EN P R EIV LGTGS+ P
Sbjct: 448 ELPSFQESVEEYRKN--------------VQENPAPA---EKRSQYPEIVFLGTGSAIPM 490
Query: 506 KYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHA 565
K RNVSS VNL S+LLDCGEGT GQL R YG + D + L +++SH+HADHH
Sbjct: 491 KIRNVSSTLVNLSPDKSVLLDCGEGTFGQLCRHYG-QQIDRVLCSLTAVFVSHLHADHHT 549
Query: 566 GLARILALRRDLLK--GVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWN 623
GL IL R L G P +PLLVV P L+ +L Y HC+
Sbjct: 550 GLLNILLQREHALASLGKPFQPLLVVAPTQLRAWLQQYHN---------HCQ-------- 592
Query: 624 DFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLK 683
E + ++S C+Q G V N L+
Sbjct: 593 ------EILHHVS-------------------MIPAKCLQK-----GAEVSNTTLERLIS 622
Query: 684 NLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPEL 743
L L LE + V HC AFG AL + GWK+VYSGDT PC L
Sbjct: 623 LL---LETCDLEEFQTCLVRHCKHAFGCALVHSS----------GWKVVYSGDTMPCEAL 669
Query: 744 VEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIP 803
V+ + AT+LIHEAT EDG+ EEA+ K HSTT +AI+VG I+L HFSQRY KIP
Sbjct: 670 VQMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAINVGMRMNAEFIMLNHFSQRYAKIP 729
Query: 804 VVDETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKDEM 845
+ K IAFD M + D P +PK++P K LF ++
Sbjct: 730 LFSPDFNEKVGIAFDHMKVCFGDFPTVPKLIPPLKALFAGDI 771
>sp|Q9BQ52|RNZ2_HUMAN Zinc phosphodiesterase ELAC protein 2 OS=Homo sapiens GN=ELAC2 PE=1
SV=2
Length = 826
Score = 314 bits (804), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 257/842 (30%), Positives = 374/842 (44%), Gaps = 159/842 (18%)
Query: 41 NTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSR 100
NT+ Y+Q++ G ++D+ ++ +F + R++FN GEG+QR EHK+K++++D+IFL+R
Sbjct: 56 NTV-YLQVVAAG--SRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTR 112
Query: 101 VCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAP 160
+ GGL G++LTL G ++ GP L+ ++A+K F + P
Sbjct: 113 MHWSNVGGLSGMILTLKETGLPKCVLS--GPPQLEKYLEAIKIFSGPLKGIE---LAVRP 167
Query: 161 SSDASLPDSAKSANHIILVDNE--------------LAKISAIL------------LKPS 194
S D + I + + L+++S L
Sbjct: 168 HSAPEYEDETMTVYQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSESNENEPHLPHG 227
Query: 195 CSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRE-----LQSGKSVKSD 249
S V+ V ++C+L G F KA +GL G ++ GKS+ +
Sbjct: 228 VSQRRGVRDSSLVVAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHE 287
Query: 250 TLDIMVHPSDVLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNC 309
+I+ ++ P PG ++V+CP ES + + N+ + + G + V
Sbjct: 288 GREILA--EELCTPPDPGAAFVVVECPDESFIQPICE----NATFQRYQG--KADAPVAL 339
Query: 310 IIHLSPVSVTGTSNYQKWMKRFG-SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQL 368
++H++P SV S YQ+WM+RFG QH++ +V S +I T+LN + P +
Sbjct: 340 VVHMAPASVLVDSRYQQWMERFGPDTQHLVLNENCASVHN---LRSHKIQTQLNLIHPDI 396
Query: 369 FPASGFWSLPHFNTSAAESSASEGP---VPSICAENLLKFTLRPLANLGIDRTNIPSLEA 425
FP L F EGP VP + E LLK+ LRP D + E
Sbjct: 397 FPL-----LTSFRCK------KEGPTLSVPMVQGECLLKYQLRPRREWQRDAIITCNPE- 444
Query: 426 PSEITNELLSEVPEVVDAAHQISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLD 485
E + A Q+ F Q +E + D E+
Sbjct: 445 -------------EFIVEALQLPNFQQSVQEYRRSAQ--DGPAPAEK------------- 476
Query: 486 NVRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGAD 545
R EI+ LGTGS+ P K RNVS+ VN+ SLLLDCGEGT GQL R YG + D
Sbjct: 477 --RSQYPEIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYG-DQVD 533
Query: 546 SAVRKLRCIWISHIHADHHAGLARILALRRDLLK--GVPHEPLLVVGPGPLKRYLDAYER 603
+ L +++SH+HADHH GL IL R L G P PLLVV P LK +L Y
Sbjct: 534 RVLGTLAAVFVSHLHADHHTGLPSILLQRERALASLGKPLHPLLVVAPNQLKAWLQQYHN 593
Query: 604 LEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQ 663
C+ E + ++S C+Q
Sbjct: 594 ---------QCQ--------------EVLHHIS-------------------MIPAKCLQ 611
Query: 664 SVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVG 723
G + + A L+ +L L LE + V HC AFG AL
Sbjct: 612 E-----GAEISSPAVERLISSL---LRTCDLEEFQTCLVRHCKHAFGCALVHTS------ 657
Query: 724 KVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGS 783
GWK+VYSGDT PC LV + AT+LIHEAT EDG+ EEA+ K HSTT +AI VG
Sbjct: 658 ----GWKVVYSGDTMPCEALVRMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGM 713
Query: 784 SAGVYRIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKD 843
I+L HFSQRY K+P+ K +AFD M + D P +PK++P K LF
Sbjct: 714 RMNAEFIMLNHFSQRYAKVPLFSPNFSEKVGVAFDHMKVCFGDFPTMPKLIPPLKALFAG 773
Query: 844 EM 845
++
Sbjct: 774 DI 775
>sp|Q9GL73|RNZ2_GORGO Zinc phosphodiesterase ELAC protein 2 OS=Gorilla gorilla gorilla
GN=ELAC2 PE=2 SV=1
Length = 826
Score = 312 bits (800), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 255/841 (30%), Positives = 370/841 (43%), Gaps = 164/841 (19%)
Query: 45 YVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSE 104
Y+Q++ G ++D+ ++ +F + R++FN GEG+QR EHK+K+ ++D+IFL+R+
Sbjct: 59 YLQVVAAG--SRDSGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVVRLDNIFLTRMHWS 116
Query: 105 TAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDA 164
GGL G++LTL G ++ GP L+ ++A+K F + P S
Sbjct: 117 NVGGLSGMILTLKETGLPKCVLS--GPPQLEKYLEAIKIFSGPLKGIE---LAVRPHSAP 171
Query: 165 SLPDSAKSANHIILVDNE--------------LAKISAIL------------LKPSCSDG 198
D + I + + L+++S L S
Sbjct: 172 EYEDETMTVYQIPIHSEQRRGRHQPWQSPERPLSRLSPERSSDSESNENEPHLPHGVSQR 231
Query: 199 SPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRE-----LQSGKSVKSDTLDI 253
V+ V ++C+L G F KA +GL G ++ GKS+ + +I
Sbjct: 232 RGVRDSSLVVAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHEGREI 291
Query: 254 MVHPSDVLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHL 313
+ ++ P PG ++V+CP ES + + N+ + + G + V ++H+
Sbjct: 292 LA--EELCTPPDPGAAFVVVECPDESFIQPICE----NATFQRYQG--KADAPVALVVHM 343
Query: 314 SPVSVTGTSNYQKWMKRFG-SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFPAS 372
+P SV S YQ+WM+RFG QH++ +V S +I T+LN + P +FP
Sbjct: 344 APESVLVDSRYQQWMERFGPDTQHLVLNENCASVHN---LRSHKIQTQLNLIHPDIFPL- 399
Query: 373 GFWSLPHFNTSAAESSASEGP---VPSICAENLLKFTLRPLANLGIDRTNIPSLEAPSEI 429
S P EGP VP + E LLK+ LRP D + E
Sbjct: 400 -LTSFP---------CKKEGPTLSVPMVQGECLLKYQLRPRREWQRDAIITCNPE----- 444
Query: 430 TNELLSEVPEVVDAAHQISQFWQGPRELK---DDCPMLDNEVMIEESWLDENRLPNCLDN 486
E + A Q+ F Q +E + D P +
Sbjct: 445 ---------EFIVEALQLPNFQQSVQEYRRSVQDVPAPAEK------------------- 476
Query: 487 VRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADS 546
R EI+ LGTGS+ P K RNVS+ VN+ SLLLDCGEGT GQL R YG + D
Sbjct: 477 -RSQYPEIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYG-DQVDR 534
Query: 547 AVRKLRCIWISHIHADHHAGLARILALRRDLLK--GVPHEPLLVVGPGPLKRYLDAYERL 604
+ L +++SH+HADHH GL IL R L G P PLLVV P LK +L Y
Sbjct: 535 VLGTLAAVFVSHLHADHHTGLLNILLQREQALASLGKPLHPLLVVAPSQLKAWLQQYHN- 593
Query: 605 EDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQS 664
C+ E + ++S C+Q
Sbjct: 594 --------QCQ--------------EVLHHIS-------------------MIPAKCLQE 612
Query: 665 VWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGK 724
G + + A L+ +L L LE + V HC AFG AL
Sbjct: 613 -----GAEISSPAVERLISSL---LRTCDLEEFQTCLVRHCKHAFGCALVHTS------- 657
Query: 725 VIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSS 784
GWK+VYSGDT PC LV + AT+LIHEAT EDG+ EEA+ K HSTT +AI VG
Sbjct: 658 ---GWKVVYSGDTMPCEALVRMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGMR 714
Query: 785 AGVYRIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKDE 844
I+L HFSQRY K+P+ K +AFD M + D P +PK++P K LF +
Sbjct: 715 MNAEFIMLNHFSQRYAKVPLFSPNFNEKVGVAFDHMKVCFGDFPTMPKLIPPLKALFAGD 774
Query: 845 M 845
+
Sbjct: 775 I 775
>sp|Q9GL72|RNZ2_PANTR Zinc phosphodiesterase ELAC protein 2 OS=Pan troglodytes GN=ELAC2
PE=2 SV=1
Length = 826
Score = 311 bits (798), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 256/842 (30%), Positives = 373/842 (44%), Gaps = 159/842 (18%)
Query: 41 NTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSR 100
NT+ Y+Q++ G ++D+ ++ +F + R++FN GEG+QR EHK+K++++D+IFL+R
Sbjct: 56 NTV-YLQVVAAG--SRDSGAALYVFSEFNRYLFNCGEGIQRLMQEHKLKVARLDNIFLTR 112
Query: 101 VCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAP 160
+ GGL G++LTL G ++ GP L+ ++A+K F + P
Sbjct: 113 MHWSNVGGLSGMILTLKETGLPKCVLS--GPPQLEKYLEAIKIFSGPLKGIE---LAVRP 167
Query: 161 SSDASLPDSAKSANHIILVDNE--------------LAKISAIL------------LKPS 194
S D + I + + L+++S L
Sbjct: 168 HSAPEYEDETMTVYQIPIHSEQRRGKHQPWQSPERPLSRLSPERSSDSESNENEPHLPHG 227
Query: 195 CSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRE-----LQSGKSVKSD 249
S V+ V ++C+L G F KA +GL G ++ GKS+ +
Sbjct: 228 VSQRRGVRDSSLVVAFICKLHLKRGNFLVLKAKEMGLPVGTAAIAPIIAAVKDGKSITHE 287
Query: 250 TLDIMVHPSDVLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNC 309
+I+ ++ P PG ++V+CP ES + + N+ + + G + V
Sbjct: 288 GREILA--EELCTPPDPGAAFVVVECPDESFIQPICE----NATFQRYQG--KADAPVAL 339
Query: 310 IIHLSPVSVTGTSNYQKWMKRFG-SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQL 368
++H++P SV S YQ+WM+RFG QH++ +V S +I T+LN + P +
Sbjct: 340 VVHMAPESVLVDSRYQQWMERFGPDTQHLVLNENCASVHN---LRSHKIQTQLNLIHPDI 396
Query: 369 FPASGFWSLPHFNTSAAESSASEGP---VPSICAENLLKFTLRPLANLGIDRTNIPSLEA 425
FP S P EGP VP + E LLK+ LRP D + E
Sbjct: 397 FPL--LTSFP---------CKKEGPTLSVPMVQGECLLKYQLRPRREWQRDAIITCNPE- 444
Query: 426 PSEITNELLSEVPEVVDAAHQISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLD 485
E + A Q+ F Q +E + D E+
Sbjct: 445 -------------EFIIEALQLPNFQQSVQEYRRSAQ--DGPAPAEK------------- 476
Query: 486 NVRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGAD 545
R EI+ LGTGS+ P K RNVS+ VN+ SLLLDCGEGT GQL R YG + D
Sbjct: 477 --RSQYPEIIFLGTGSAIPMKIRNVSATLVNISPDTSLLLDCGEGTFGQLCRHYG-DQVD 533
Query: 546 SAVRKLRCIWISHIHADHHAGLARILALRRDLLK--GVPHEPLLVVGPGPLKRYLDAYER 603
+ L +++SH+HADHH GL IL R L G P PLLVV P LK +L Y
Sbjct: 534 RVLGTLAAVFVSHLHADHHTGLLNILLQRERALASLGKPFHPLLVVAPNQLKAWLQQYHN 593
Query: 604 LEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQ 663
C+ E + ++S C+Q
Sbjct: 594 ---------QCQ--------------EVLHHIS-------------------MIPAKCLQ 611
Query: 664 SVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVG 723
G + + A L+ +L L LE + V HC AFG AL
Sbjct: 612 E-----GAEISSPAVERLISSL---LRTCDLEEFQTCLVRHCKHAFGCALVHTS------ 657
Query: 724 KVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGS 783
GWK+VYSGDT PC LV + AT+LIHEAT EDG+ EEA+ K HSTT +AI VG
Sbjct: 658 ----GWKVVYSGDTMPCEALVRMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAISVGM 713
Query: 784 SAGVYRIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKD 843
I+L HFSQRY K+P+ K +AFD M + D +PK++P K LF
Sbjct: 714 RMNAEFIMLNHFSQRYAKVPLFSPNFNEKVGVAFDHMKVCFGDFATMPKLIPPLKALFAG 773
Query: 844 EM 845
++
Sbjct: 774 DI 775
>sp|Q8CGS5|RNZ2_RAT Zinc phosphodiesterase ELAC protein 2 OS=Rattus norvegicus GN=Elac2
PE=2 SV=1
Length = 827
Score = 311 bits (796), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 255/835 (30%), Positives = 373/835 (44%), Gaps = 179/835 (21%)
Query: 62 VLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGD 121
+ +F + R++FN GEG+QR EHK+K++++D+IFL+R+ GGL G++LTL G
Sbjct: 68 LYVFSEYNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTRMHWSNVGGLCGMILTLKETGL 127
Query: 122 EGLSVNVWGPSDLKYLVDAMKSFI-----------PHAAM-------------VHT--HC 155
++ GP L+ ++A+K F PH+A +H+ C
Sbjct: 128 PKCVLS--GPPQLEKYLEAIKIFSGPLKGIDLAVRPHSAPEYKDETMTVYQVPIHSERRC 185
Query: 156 FGPAPSSD-----------ASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPG 204
PS S D + N L + A ++ K D S V
Sbjct: 186 GEQEPSRSPKRSPNRLSPKQSSSDPGSAENGQCLPEGSSAGVNG---KAWGRDPSLV--- 239
Query: 205 ETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRE-----LQSGKSVKSDTLDIMVHPSD 259
V +VC+L G F KA LGL G ++ GKS+ + +I +
Sbjct: 240 ---VAFVCKLHLRKGNFLVLKAKELGLPVGTAAIAPIIAAVKDGKSITYEGREIAA--EE 294
Query: 260 VLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPVSVT 319
+ P PG + ++V+CP E + + ++ Y + V ++H++P SV
Sbjct: 295 LCTPPDPGLVFIVVECPDEGFIQPICENDTFQRYQGEADA------PVAVVVHIAPESVL 348
Query: 320 GTSNYQKWMKRFG-SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFPASGFWSLP 378
S YQ+WM+RFG QH++ +V S +I T+L+ + P +FP L
Sbjct: 349 IDSRYQQWMERFGPDTQHLILNENCPSVHN---LRSHKIQTQLSLIHPDIFP-----QLT 400
Query: 379 HFNTSAAESSASEGPVPSICAENLLKFTLRPLANLGIDRTNIPSLEAPSEITNELLSEVP 438
F++ S+ S +P++ E LLK+ +RP D T L+ T+E ++E
Sbjct: 401 SFHSKEEGSTFS---LPTVRGECLLKYHVRPKREWQRDTT----LDCN---TDEFIAEAL 450
Query: 439 EVVDAAHQISQFWQ------GPRELKDDCPMLDNEVMIEESWLDENRLPNCLDNVRRDDL 492
E+ + + ++ + P E + P
Sbjct: 451 ELPNFQESVEEYRKNMQASPAPAEKRSQYP------------------------------ 480
Query: 493 EIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLR 552
EIV LGTGS+ P K RNVSS VNL S+LLDCGEGT GQL R YG + D + L
Sbjct: 481 EIVFLGTGSAIPMKIRNVSSTLVNLSPDKSVLLDCGEGTFGQLCRHYG-QQIDRVLCNLT 539
Query: 553 CIWISHIHADHHAGLARILALRRDLLK--GVPHEPLLVVGPGPLKRYLDAYERLEDLDMQ 610
+++SH+HADHH GL IL R L G P +PLLVV P L+ +L Y
Sbjct: 540 AVFVSHLHADHHTGLLNILLQREHALASLGKPFQPLLVVAPTQLRAWLQQYHN------- 592
Query: 611 FLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPG 670
C+ E + ++S C+Q + P
Sbjct: 593 --QCQ--------------EILHHIS-------------------MIPAKCLQKGAEVPS 617
Query: 671 IPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWK 730
PV+ + +L L+ + V HC AFG AL + GWK
Sbjct: 618 PPVERLISL--------LLETCDLQEFQTCLVRHCKHAFGCALVHSS----------GWK 659
Query: 731 IVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRI 790
+VYSGDT PC LV+ + AT+LIHEAT EDG+ EEA+ K HSTT +AI VG I
Sbjct: 660 VVYSGDTMPCEALVQMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAIGVGMRMNAEFI 719
Query: 791 ILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKDEM 845
+L HFSQRY KIP+ K IAFD M + D P +PK++P K LF D++
Sbjct: 720 MLNHFSQRYAKIPLFSPDFNEKVGIAFDHMKVCFGDFPTVPKLIPPLKALFADDI 774
>sp|Q8MKW7|RNZ_DROME Ribonuclease Z, mitochondrial OS=Drosophila melanogaster GN=JhI-1
PE=1 SV=2
Length = 766
Score = 279 bits (713), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 241/820 (29%), Positives = 371/820 (45%), Gaps = 161/820 (19%)
Query: 46 VQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSET 105
+Q+LG+G + +V LF D R++FN GEG QR EHK +LS+++ IFL++ +
Sbjct: 61 LQVLGSGAN--GAPAAVYLFTDQARYLFNCGEGTQRLAHEHKTRLSRLEQIFLTQNTWAS 118
Query: 106 AGGLPGLLLTL--AGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSD 163
GGLPGL LT+ AG+ D GL GP L ++ +M+ F+ + + S
Sbjct: 119 CGGLPGLTLTIQDAGVRDIGL----HGPPHLGSMLQSMRRFV---VLKNLQVRPNDCSEG 171
Query: 164 ASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDP 223
A DS + + L+++E P ++ + Y+C+L G +
Sbjct: 172 ACFEDSILKVDSLPLINSE-------------------DPTKSVINYICQLKPRAGALNL 212
Query: 224 KKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPGPLVLLVDCPTESHVLE 283
K V G+ PGP +L++G + + V DV S + +D P+E+++
Sbjct: 213 VKCVEQGVPPGPLLGQLKNGNDITLPDGKV-VRSVDVTEASETALSFVFLDVPSENYLPA 271
Query: 284 LLS-AESLNSYYADFSGDPQCAKTVNCIIHLSPVSVTGTSNYQKWM-KRFGS-AQHIMAG 340
LL+ + L G+ + + V ++H +P ++ Y+ ++ + F S AQHI
Sbjct: 272 LLTHGKRLKKL-----GEEKLTE-VALVVHFTPYHISSRQVYKDFVVESFSSEAQHIYLS 325
Query: 341 HEMKNVEIPILKSSARITTRLNYLCPQLFPASG--------FWSLPHFNTS--------A 384
+ + ++ RI +L+ L PQ+FP G SL T
Sbjct: 326 SPLN--QFSGYAAAHRIQHQLHQLAPQVFPLLGEQLSCQSQTLSLNLKKTKLDEADSEDK 383
Query: 385 AESSASEGPVPSICAENLLKFTLRPLANLGIDRTNIPSLEAPSEITNELLSEVPEVVDAA 444
A + A+E + A + + LRP G+DRT LE S++T E E V
Sbjct: 384 ANAKANETEEQGVVA--MTNYHLRP--RKGLDRT----LE--SKLTPE------EYVKET 427
Query: 445 HQISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLDNVRRDDLEIVLLGTGSSQP 504
H + F + + K++ DN + P +I+ LGTGS P
Sbjct: 428 HAVPGFLELLAKFKEEYSFPDNSA---------DSYP-----------KIIFLGTGSCIP 467
Query: 505 SKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHH 564
+K RNVSSI + +LLDCGEGT GQ+ R YG E +R+L+ I++SH+HADHH
Sbjct: 468 NKTRNVSSILIRTAIDAYVLLDCGEGTYGQIVRLYGHEKGQLILRQLQAIYVSHLHADHH 527
Query: 565 AGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWND 624
GL +L RR L +PL+++ P ++ +L+ Y R ++ + YT
Sbjct: 528 IGLIGLLRERRQLKPRA--DPLILLAPRQIEPWLEFYNR----QIETVEDAYT------- 574
Query: 625 FEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKN 684
GNGE + SP S E
Sbjct: 575 LVGNGELL------ASPLSGEQ-------------------------------------- 590
Query: 685 LKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELV 744
+ G+ ++ + V HCP +FG +L A + NS KI YSGDT PC +L+
Sbjct: 591 ----VERLGITSISTCLVRHCPNSFGISLTLAAKHNS-----EPVKITYSGDTMPCQDLI 641
Query: 745 EASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIPV 804
+ R +TVLIHEAT ED + EEA K HST +AI G + ILTHFSQRY K P
Sbjct: 642 DLGRDSTVLIHEATMEDDLEEEARLKTHSTVSQAIQQGRNMNARHTILTHFSQRYAKCPR 701
Query: 805 V-DETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKD 843
+ + M + IAFD M + + DL K+ P ++ +
Sbjct: 702 LPSDEDMQRVAIAFDNMEVTIEDLQHYHKLYPALFAMYAE 741
>sp|Q10155|RNZ1_SCHPO Ribonuclease Z 1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=trz1 PE=3 SV=1
Length = 809
Score = 249 bits (635), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 243/914 (26%), Positives = 381/914 (41%), Gaps = 229/914 (25%)
Query: 45 YVQILGTGMDTQDTS--PSVLLFFDNQRFIFNA-GEGLQRFCTEHKIKLSKVDHIFLSR- 100
Y+Q + + ++DTS P + LFFD++R++F + GEG QR +++LSK+ +FL +
Sbjct: 14 YLQFVS--VSSRDTSCIPCIHLFFDSKRYVFGSVGEGCQRAILSQQLRLSKIKDVFLMQG 71
Query: 101 ---------------------------------------VCS--------ETAGGLPGLL 113
+CS ++ GG PG L
Sbjct: 72 SSISSPDTYDSSSSSSTTSVSDMLQLDDRDKVIVSERNSMCSTVNYPTWWDSCGGFPGFL 131
Query: 114 LTLAGIGDEGLS-----VNVWGPSDLKYLVDAMKSFIPHAAM---VHTHCFGPAP----- 160
L+L I + G + + GPS++ + +M+ F H + V + AP
Sbjct: 132 LSLNDISEPGETGEASPFVLHGPSEVHQFLSSMRHFTYHTNVNLTVQGYTSAEAPVFVDE 191
Query: 161 ----------------------------SSDASLPDSAKSANHIIL-VDNELAKISAILL 191
++ D A ++ H V N+ + + +
Sbjct: 192 NICVTPVVVSLVKNSFKKRKHENINRGTNARPLKEDRANTSPHWYSHVSNDTSFVVENAM 251
Query: 192 KPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKSDTL 251
+ + P KP E + Y+ + GKFD KA +LG+ G L G+ V +
Sbjct: 252 YNTPAPLEPDKP-ELFISYIVQSHPTPGKFDAAKAKSLGITKGLDCGRLARGEPVTLEN- 309
Query: 252 DIMVHPSDVLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCII 311
V+P +V+GPS+PG ++ CP E V++L+ ++ P+ C+I
Sbjct: 310 GKTVYPKEVIGPSIPGSSFFIIHCPNEL-VIDLVIENH------KWTNAPKPV----CVI 358
Query: 312 HLSPVSVTGTSNYQKWMKRFGS-AQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFP 370
H V YQ W+ F S H++A E+ V I +S+ I T LN L ++FP
Sbjct: 359 HSVTPEVYKNPRYQSWISSFPSEVSHLIASTEVNEV-INYPRSAVAIAT-LNLLDSKVFP 416
Query: 371 ASGFWSLPHFNTSAAESSASEGPVPSICAENLLKFTLRPLANLGIDRTNIP-SLEAPSEI 429
FN ++ + A+ L+F GID + + S+E E+
Sbjct: 417 LG-------FNCYEVKNVQKNNRIA--FAKPKLRFAFG--KKTGIDDSEVGVSIE---EL 462
Query: 430 TNELLSEVPEVVDAAHQISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLDNVRR 489
+++L E P+ + ++ D+ + P+ +
Sbjct: 463 KDKILKEKPDYKSFVEEAQKYVS-----------------------DKPKAPSFAGS--- 496
Query: 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNL-----------FSKGSLLLDCGEGTLGQLKRR 538
D++I LGTGS+ PS YRNVSS YV + S ++LLDCGEGTLG+L R+
Sbjct: 497 -DIQICTLGTGSAMPSLYRNVSSTYVRIPVDKKCMEDSAISMKNILLDCGEGTLGRLSRQ 555
Query: 539 YGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYL 598
YG + + LR I+ISH+HADHHAG+ +L G L + P + +L
Sbjct: 556 YG-DNLKYEIASLRWIYISHMHADHHAGVIGVLKAWTKYSDG--RSKLFITAPPQFEFWL 612
Query: 599 DAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAK 658
Y R++ L P S I+ + K
Sbjct: 613 LEYSRIDYL---------------------------------PLSNIVFISNSALRTDRK 639
Query: 659 GSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAER 718
S ++S L ++ E L + + P +HCP ++ E
Sbjct: 640 PSALES------------------SRLSSLFKEFDLVSFRTVPAIHCPYSY-----CMEI 676
Query: 719 INSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEA 778
NS GWKI YSGDTRP + ++ +T+LIHEAT ED M E AI K HST EA
Sbjct: 677 TNS-----SGWKIAYSGDTRPSEDFANIAKDSTLLIHEATLEDSMHEIAIKKQHSTYSEA 731
Query: 779 IDVGSSAGVYRIILTHFSQRYPKIPVVD-ETHMHKTCIAFDLMSINLADLPILPKVLPYF 837
++V AG +ILTHFSQRYPK+P +D T +AFD M++ ++D+ +
Sbjct: 732 LEVAKKAGTKNVILTHFSQRYPKLPDIDISTEDLHIALAFDGMTLKISDISLFRYFGKPL 791
Query: 838 KLLFKDEMPVDESD 851
LF +E +ESD
Sbjct: 792 AYLFNEENLKEESD 805
>sp|O44476|RNZ_CAEEL Ribonuclease Z OS=Caenorhabditis elegans GN=hoe-1 PE=2 SV=2
Length = 833
Score = 235 bits (600), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 222/824 (26%), Positives = 364/824 (44%), Gaps = 141/824 (17%)
Query: 46 VQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSET 105
+++LG G T +L + ++FN E RF + +I+ S V +F++ +
Sbjct: 101 IEVLGNG--TGLLRACFILRTPLKTYMFNCPENACRFLWQLRIRSSSVVDLFITSANWDN 158
Query: 106 AGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPA--PSSD 163
G+ +LL+ LS + G ++K+ ++ ++ F +G PS
Sbjct: 159 IAGISSILLSKES---NALSTRLHGAMNIKHFLECIRPF-------QDSDYGSCKYPSQV 208
Query: 164 ASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSP------VKPGETSVIYVCELPEI 217
P + ++ L K++ I L P + GS VK + ++ E+ E
Sbjct: 209 EERPYTMENYEDAGL------KVTYIPLSPPLNIGSNNEKSKNVKVNNVDIAFLIEMKEA 262
Query: 218 TGKFDPKKAVALGLKPGPKYRELQSGKSV-----KSDTLDIMVHPSDVLGPSLPGPLVLL 272
+ D K + L + GP +L+SG++V ++ D + V G PL+L+
Sbjct: 263 ARRIDTMKLMELKVPKGPLIGKLKSGEAVTLPDGRTIQPDQVFSSDKVEGDK---PLLLV 319
Query: 273 VDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPVSVTGTSNYQKWMKRFG 332
+C TE HV L+ + SL + +G+ Q ++ ++H+S +V T Y+ M++
Sbjct: 320 TECTTEDHVKALIDSSSLQPF---LNGEKQ----LDYMVHISDDAVINTPTYRHLMEKLN 372
Query: 333 --SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFPASGFWSLPHFNTSAAESSAS 390
S H++ N IP ++S + T L + P LFPA T E S
Sbjct: 373 NPSITHLLING--GNPVIPAVESVYKHTRLLRSIAPSLFPALHPIDWSGIITQNEELSQR 430
Query: 391 EGPVPSICAENLLKFTLRPLANLGIDRTNIPSLEAPSEITNELLSEVPEVVDAAHQ-ISQ 449
+ + + ++ +R A+ E P I N LL+ PE+ D A + I +
Sbjct: 431 QDQFIRVAP--MQRYWMRRGASFN---------EEP--IVNNLLAAEPELSDKAKELIKE 477
Query: 450 FWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLDNVRRDDLEIVLLGTGSSQPSKYRN 509
+ + +E K DC P ++ GT S+ PSKYRN
Sbjct: 478 YQKLEKENKMDC-----------------EFP-----------KLTFFGTSSAVPSKYRN 509
Query: 510 VSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLAR 569
V+ V ++L+D GEGT GQ++ +G +G + L C+ I+H H DH GL
Sbjct: 510 VTGYLVEASENSAILIDVGEGTYGQMRAVFGEDGCKQLLVNLNCVLITHAHQDHMNGLYT 569
Query: 570 ILALRRDLLK--GVPHEPLLVVGP----GPLKRYLDAYERLEDLDMQFLHCRYTREASWN 623
I+A R++ + G P+ PL++V P+K Y +E +E L RY +
Sbjct: 570 IIARRKEAFESLGAPYRPLVLVCNRNVLKPMKTYSICFENIEHLLEIVDISRYPLTPPGS 629
Query: 624 DFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLK 683
G+ + L +P P S + L + + S + WK
Sbjct: 630 PGGPPGKRPR-LPSPHLPPSRDVLQDMS-------SSFDKKAWK---------------- 665
Query: 684 NLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPEL 743
L+ L + V H A GF ++ A G +IV+SGDT+PC L
Sbjct: 666 ----------LDELKAVQVHHTRMANGFVMRVA-----------GKRIVFSGDTKPCDLL 704
Query: 744 VEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIP 803
VE + A VL+HE+TFEDG +A+ K HST +A+DVG IILTHFS RYPK+P
Sbjct: 705 VEEGKDADVLVHESTFEDGHEADAMRKRHSTMGQAVDVGKRMNAKHIILTHFSARYPKVP 764
Query: 804 VVDETHMHKTCI--AFDLMSINLADLPILPKVLPYFKLLFKDEM 845
V+ E ++ K I A D++ + LP++ K+LP F+ +F E+
Sbjct: 765 VLPE-YLDKENIGVAMDMLRVRFDHLPLVSKLLPIFREVFVAEL 807
>sp|Q8HY87|RNZ2_MACFA Zinc phosphodiesterase ELAC protein 2 OS=Macaca fascicularis
GN=ELAC2 PE=2 SV=1
Length = 826
Score = 209 bits (533), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 179/598 (29%), Positives = 268/598 (44%), Gaps = 99/598 (16%)
Query: 41 NTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSR 100
NT+ Y+Q++ G ++D ++ +F + R++FN GEG+QR EHK+K++++D+IFL+R
Sbjct: 56 NTV-YLQVVAVG--SRDAGAALYVFSEFNRYLFNCGEGVQRLMQEHKLKVARLDNIFLTR 112
Query: 101 VCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAP 160
+ GGL G++LTL G ++ GP L+ ++A+K F + + P
Sbjct: 113 MHWSNVGGLSGMILTLKETGLPKCVLS--GPPQLEKYLEAIKIF---SGPLKGIELAVRP 167
Query: 161 SSDASLPDSAKSANHIILVDNE--------------LAKISAIL------------LKPS 194
S D + I + + L ++S L
Sbjct: 168 HSAPEYKDETMTVYQIPIHSEQRSGKHQPWQSPERPLGRLSPERSSDSESNESEPHLPRG 227
Query: 195 CSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRE-----LQSGKSVKSD 249
S V+ V ++C+L G F KA LGL G ++ GKS+ +
Sbjct: 228 VSQRRGVRDPSLVVAFICKLHLKRGSFLVLKAKELGLPVGTAAIAPIIAAVKDGKSITHE 287
Query: 250 TLDIMVHPSDVLGPSLPGPLVLLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNC 309
+I+ ++ P PG ++V+CP E + + N+ + + G + V
Sbjct: 288 GREILA--EELCTPPDPGAAFVVVECPDEGFIQPICE----NATFQRYQG--KADAPVAL 339
Query: 310 IIHLSPVSVTGTSNYQKWMKRFG-SAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQL 368
++H++P SV S YQ+WM+RFG QH++ +V S +I T+LN + P +
Sbjct: 340 VVHMAPESVLADSRYQQWMERFGPDTQHLVLNENCASVHN---LRSYKIQTQLNLIHPDI 396
Query: 369 FPASGFWSLPHFNTSAAESSASEGP---VPSICAENLLKFTLRPLANLGIDRTNIPSLEA 425
FP S P EGP VP + E LLK+ LRP D + E
Sbjct: 397 FPL--LTSFPR---------KKEGPTLSVPVVQGECLLKYQLRPRREWQRDAIITCNPE- 444
Query: 426 PSEITNELLSEVPEVVDAAHQISQFWQGPRELKDDCPMLDNEVMIEESWLDENRLPNCLD 485
E +D A Q+ F + +E + D E+
Sbjct: 445 -------------EFIDEALQLPNFQESMQEYRRSAQ--DGPAPAEK------------- 476
Query: 486 NVRRDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGAD 545
R EIV LGTGS+ P K RNVS+ VN+ SLLLDCGEGT GQL R YG + D
Sbjct: 477 --RSQYPEIVFLGTGSAVPMKTRNVSATLVNISPDTSLLLDCGEGTFGQLYRHYG-DQVD 533
Query: 546 SAVRKLRCIWISHIHADHHAGLARILALRRDLLK--GVPHEPLLVVGPGPLKRYLDAY 601
+ L +++SH+HADHH GL IL R L G P PLLVV P LK +L Y
Sbjct: 534 RVLGSLAAVFVSHLHADHHTGLLNILLQRERALASLGKPFHPLLVVAPTQLKAWLQQY 591
Score = 137 bits (345), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 71/161 (44%), Positives = 92/161 (57%), Gaps = 10/161 (6%)
Query: 685 LKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELV 744
+ ++L LE + V HC AFG AL GWK+VYSGDT PC LV
Sbjct: 625 ISSLLRTCDLEEFQTCLVRHCRHAFGCALVHTS----------GWKVVYSGDTMPCEALV 674
Query: 745 EASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIPV 804
+ + AT+LIHEAT EDG+ EEA+ K HSTT +AI VG I+L HFSQRY K+P+
Sbjct: 675 QMGKDATLLIHEATLEDGLEEEAVEKTHSTTSQAIRVGMRMNAEFIMLNHFSQRYAKVPL 734
Query: 805 VDETHMHKTCIAFDLMSINLADLPILPKVLPYFKLLFKDEM 845
K IAFD M ++ D P +PK++P K LF ++
Sbjct: 735 FSPDFNEKVGIAFDHMKVSFGDFPTVPKLIPPLKALFAGDI 775
>sp|P36159|RNZ_YEAST Ribonuclease Z OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=TRZ1 PE=1 SV=1
Length = 838
Score = 201 bits (512), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 206/833 (24%), Positives = 362/833 (43%), Gaps = 123/833 (14%)
Query: 69 QRFIFNAGEGLQRFCTEHKIKLSKVDHIFLS-RVCSETAGGLPGLLLTLAGIGDEGLSVN 127
+ F GEG QR TE+KI++SK+ IFL+ + GGLPG++LT+A G L ++
Sbjct: 28 KYFFGKIGEGSQRSLTENKIRISKLKDIFLTGELNWSDIGGLPGMILTIADQGKSNLVLH 87
Query: 128 VWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDN------ 181
+G L Y+V + F+ FG +D + D + II V +
Sbjct: 88 -YGNDILNYIVSTWRYFVFR--------FG-IDLNDHIMKDKEVYKDKIIAVKSFNVLKN 137
Query: 182 ------------ELAKISAILLK--PSCSDGSPVKPGETSVIYVCELPE----------- 216
+ + +I+ K P + P + V ELP+
Sbjct: 138 GGEDRLGVFDSFQKGVLRSIVAKMFPKHAPTDRYDPSSDPHLNV-ELPDLDAKVEVSTNY 196
Query: 217 ------ITGKFDPKKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPGPLV 270
+ GKF ++A+ LG+ GP + +L G+++ D I+V P VL V
Sbjct: 197 EISFSPVRGKFKVEEAIKLGVPKGPLFAKLTKGQTITLDN-GIVVTPEQVLENERHFAKV 255
Query: 271 LLVDCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPVSVTGTSNYQKWM-- 328
L++D P + + LN++ F D CA+ + + + VT N ++
Sbjct: 256 LILDIPDDLY---------LNAFVEKFK-DYDCAE-LGMVYYFLGDEVTINDNLFAFIDI 304
Query: 329 ---KRFGSAQHIMAGHEMKNVEIPILKSSARITTRLNYLCPQLFPASGFWSLPHFNTSAA 385
+G H+++ +++ I SA T +L L ++LP + +
Sbjct: 305 FEKNNYGKVNHMISHNKISPNTISFF-GSALTTLKLKAL------QVNNYNLPKTDRVFS 357
Query: 386 ESSASEGPVPSICAENLLKFTLRPLANLGIDRTNIPSLEAPSEITNE--LLSEVPEVVDA 443
+ P ++ K PL N I++ NI +T E ++E P +
Sbjct: 358 KDFYDRFDTPLSRGTSMCKSQEEPL-NTIIEKDNIHIFSQNKTVTFEPFRMNEEPMKCNI 416
Query: 444 AHQISQF-WQGPRELKD---DCPMLDNEVMIEESWLDENRLPNCLDNVRRDDLEIVLLGT 499
+++ F WQ E + P+ D + +I L + N + ++ +EI+ LGT
Sbjct: 417 NGEVADFSWQEIFEEHVKPLEFPLADVDTVINNQ-LHVDNFNNSAE--KKKHVEIITLGT 473
Query: 500 GSSQPSKYRNVSSIYVNL-FSKG-------SLLLDCGEGTLGQLKRRYGVEGADSAVRKL 551
GS+ PSKYRNV S V + F+ +++LD GE TLG + R + S + L
Sbjct: 474 GSALPSKYRNVVSTLVKVPFTDADGNTINRNIMLDAGENTLGTIHRMFSQLAVKSIFQDL 533
Query: 552 RCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD--- 608
+ I++SH+HADHH G+ +L K + VV P ++++ + LE+ +
Sbjct: 534 KMIYLSHLHADHHLGIISVLNEWYKYNKDDETSYIYVVTPWQYHKFVNEWLVLENKEILK 593
Query: 609 -MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWK 667
++++ C + S+ + P+ E N K + Q
Sbjct: 594 RIKYISCEHFINDSFVRMQTQSVPL------------------AEFNEILKENSNQE--S 633
Query: 668 GPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP 727
+ +D ++++ + ++ + + +E + +HC A+ ++ N+
Sbjct: 634 NRKLELDRDSSYRDVDLIRQMYEDLSIEYFQTCRAIHCDWAYSNSITFRMDENNEHNT-- 691
Query: 728 GWKIVYSGDTRPCPEL--VEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+K+ YSGDTRP E +E + +LIHEAT E+ ++E+A+ K H T EAI V +
Sbjct: 692 -FKVSYSGDTRPNIEKFSLEIGYNSDLLIHEATLENQLLEDAVKKKHCTINEAIGVSNKM 750
Query: 786 GVYRIILTHFSQRYPKIPVVD---ETHMHKTCIAFDLMSINLADLPILPKVLP 835
++ILTHFSQRYPK+P +D + + C AFD M ++ + ++ P
Sbjct: 751 NARKLILTHFSQRYPKLPQLDNNIDVMAREFCFAFDSMIVDYEKIGEQQRIFP 803
>sp|Q8Q032|RNZ_METMA Ribonuclease Z OS=Methanosarcina mazei (strain ATCC BAA-159 / DSM
3647 / Goe1 / Go1 / JCM 11833 / OCM 88) GN=rnz PE=3 SV=1
Length = 305
Score = 131 bits (330), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 111/343 (32%), Positives = 161/343 (46%), Gaps = 46/343 (13%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLL-DCGEGTLGQLKRRYGVEGADSAVRK 550
L I+ LGTG S P++ RN S++ VNL KG LLL DCGEGT Q+ R A + +
Sbjct: 2 LRIIFLGTGGSLPTRNRNPSAVIVNL--KGELLLFDCGEGTQQQMMR------AKTGMMS 53
Query: 551 LRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQ 610
L I++SH HADH G+ ++ L + EPL + GP K + + ++ L +++
Sbjct: 54 LSSIFVSHFHADHFLGIPGLIQTMSFLGR---KEPLTIYGPEGTKEFTEVFKVLGYCNLK 110
Query: 611 FLHCRYTREASWNDFEGNGEPVKNLSTPGS-PFSTEGLINKTEANLFAKGSCMQSVWKGP 669
+ R + + EG V+ L T S P LI F + ++ + P
Sbjct: 111 Y-EVRGVELSPGDIVEGKNYVVRALKTEHSTPSLGYSLIENPRPGRFNREKAVE-LGVLP 168
Query: 670 GIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGW 729
G PL L+ PV + G +K E VG PG
Sbjct: 169 G---------PLFAKLQK-----------GNPV----EVNGKLVKPEE---VVGAPRPGR 201
Query: 730 KIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYR 789
+VYSGDTRPC ++EASR A VLIH+ +F D M A HST E + AGV +
Sbjct: 202 TVVYSGDTRPCEAVLEASRDADVLIHDGSFADEMAGWAEESMHSTAGEVASLAKEAGVRQ 261
Query: 790 IILTHFSQRYPKI--PVVDETH--MHKTCIAFDLMSINLADLP 828
++LTH S RY P+++++ +A DLM + + P
Sbjct: 262 LVLTHISSRYTDDVGPILNDSRKVFENVIVAEDLMELEVPYRP 304
Score = 56.6 bits (135), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 106/230 (46%), Gaps = 33/230 (14%)
Query: 46 VQILGTG--MDTQDTSPS-VLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVC 102
+ LGTG + T++ +PS V++ + +F+ GEG Q+ K + + IF+S
Sbjct: 4 IIFLGTGGSLPTRNRNPSAVIVNLKGELLLFDCGEGTQQQMMRAKTGMMSLSSIFVSHFH 63
Query: 103 SETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSS 162
++ G+PGL+ T++ +G + + ++GP K + K + + +
Sbjct: 64 ADHFLGIPGLIQTMSFLGRKE-PLTIYGPEGTKEFTEVFK------VLGYCNLKYEVRGV 116
Query: 163 DASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIY-VCELPEITGKF 221
+ S D + N+++ LK S S+ Y + E P G+F
Sbjct: 117 ELSPGDIVEGKNYVVRA-----------LKTEHST--------PSLGYSLIENPR-PGRF 156
Query: 222 DPKKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPGPLVL 271
+ +KAV LG+ PGP + +LQ G V+ + +V P +V+G PG V+
Sbjct: 157 NREKAVELGVLPGPLFAKLQKGNPVEVN--GKLVKPEEVVGAPRPGRTVV 204
>sp|Q8TLK5|RNZ_METAC Ribonuclease Z OS=Methanosarcina acetivorans (strain ATCC 35395 /
DSM 2834 / JCM 12185 / C2A) GN=rnz PE=3 SV=1
Length = 305
Score = 128 bits (321), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 161/345 (46%), Gaps = 50/345 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLL-DCGEGTLGQLKRRYGVEGADSAVRK 550
L I LGTG S P++ RN S++ +N +G L+L DCGEGT Q+ R A + +
Sbjct: 2 LRITFLGTGGSLPTRNRNPSAVMIN--REGELMLFDCGEGTQQQMMR------AKTGMMS 53
Query: 551 LRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQ 610
L I++SH HADH G+ ++ + + +PL++ GP + + + ++ L +++
Sbjct: 54 LSSIFVSHFHADHFLGIPGLIQTMSFMGR---KDPLMIYGPAGTREFTELFKALGYFNLK 110
Query: 611 F-LHCRYTREASWNDFEGNGEPVKNLSTPGS-PFSTEGLINKTEANLFAKGSCMQSVWKG 668
+ +H + + EG G V+ L T S P LI F + +
Sbjct: 111 YEIHGMELKPG--DVVEGEGYVVRALETEHSTPSLGYALIENPRPGRFNREKAVAL---- 164
Query: 669 PGIPVDNNAAFPLLKNL-KNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP 727
G+P PL L K EAG + + V+ P+ P
Sbjct: 165 -GVPPG-----PLFSKLQKGNPVEAGGKVVRPEEVMGTPR-------------------P 199
Query: 728 GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGV 787
G IVYSGDTRPC ++EASR A +LIH+ +F D M E A HST E + AGV
Sbjct: 200 GRTIVYSGDTRPCEAVLEASRDADLLIHDGSFADEMAEWAEESMHSTAGEVAALAKEAGV 259
Query: 788 YRIILTHFSQRYPK--IPVVDETH--MHKTCIAFDLMSINLADLP 828
+++LTH S RY P++ ++ +A DLM + + P
Sbjct: 260 RKLVLTHISSRYTDDVEPILKDSKKVFENVIVAEDLMELEIPYRP 304
Score = 61.2 bits (147), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 104/229 (45%), Gaps = 31/229 (13%)
Query: 46 VQILGTG--MDTQDTSPS-VLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVC 102
+ LGTG + T++ +PS V++ + + +F+ GEG Q+ K + + IF+S
Sbjct: 4 ITFLGTGGSLPTRNRNPSAVMINREGELMLFDCGEGTQQQMMRAKTGMMSLSSIFVSHFH 63
Query: 103 SETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSS 162
++ G+PGL+ T++ +G + + ++GP+ + + K+ H P
Sbjct: 64 ADHFLGIPGLIQTMSFMGRKD-PLMIYGPAGTREFTELFKALGYFNLKYEIHGMELKPGD 122
Query: 163 DASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFD 222
+V+ E + A+ + S S+ Y G+F+
Sbjct: 123 ---------------VVEGEGYVVRALETEHSTP----------SLGYALIENPRPGRFN 157
Query: 223 PKKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPGPLVL 271
+KAVALG+ PGP + +LQ G V++ +V P +V+G PG ++
Sbjct: 158 REKAVALGVPPGPLFSKLQKGNPVEAG--GKVVRPEEVMGTPRPGRTIV 204
>sp|C0ZBP8|RNZ_BREBN Ribonuclease Z OS=Brevibacillus brevis (strain 47 / JCM 6285 / NBRC
100599) GN=rnz PE=3 SV=1
Length = 318
Score = 119 bits (299), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 104/325 (32%), Positives = 146/325 (44%), Gaps = 72/325 (22%)
Query: 494 IVLLGTGSSQPSKYRNVSSIYVNLFSKGSL-LLDCGEGTLGQLKRRYGVEGADSAVRKLR 552
+ LGTGS P+ RNVS I + G L DCGEGT QL R A + +L
Sbjct: 3 VTFLGTGSGAPTTRRNVSGIGLRFLQAGKWWLFDCGEGTQHQLLR------APMKISQLD 56
Query: 553 CIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFL 612
I+I+H+H DH GL +LA R L+ PL + GP L RY ++ +
Sbjct: 57 KIFITHLHGDHLYGLIGLLASRS--LRNTEPTPLELYGPPGLDRYFRGI-----MEASPV 109
Query: 613 HCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIP 672
H +Y E +K +S EG+I + E + SC + + P
Sbjct: 110 HLQYPLE------------IKIVS--------EGVIYEDEEIVV---SCRMAKHRVPSF- 145
Query: 673 VDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQA-------FGFALKAAERI------ 719
A+ +++ E +F V QA FG ALK E++
Sbjct: 146 -----AYAVMEK----------EKTGAFQVERAKQAGVPSGPLFG-ALKRGEQVTLEDGR 189
Query: 720 -----NSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHST 774
+ VG+ PG KIV+SGDT P ++E ++GA +L+HEAT+ E A HST
Sbjct: 190 VLDGKDFVGEPQPGRKIVFSGDTEPSQAVLELAKGADLLVHEATYAHHDKELATRSGHST 249
Query: 775 TKEAIDVGSSAGVYRIILTHFSQRY 799
+EA + AGV + LTHFS RY
Sbjct: 250 AREAAQIAKEAGVKELCLTHFSPRY 274
Score = 48.9 bits (115), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 63/260 (24%), Positives = 105/260 (40%), Gaps = 34/260 (13%)
Query: 46 VQILGTGMDTQDTSPSV----LLFFDNQRF-IFNAGEGLQRFCTEHKIKLSKVDHIFLSR 100
V LGTG T +V L F ++ +F+ GEG Q +K+S++D IF++
Sbjct: 3 VTFLGTGSGAPTTRRNVSGIGLRFLQAGKWWLFDCGEGTQHQLLRAPMKISQLDKIFITH 62
Query: 101 VCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDL-KYLVDAMKSFIPHAAMVHTHCFGPA 159
+ + GL GLL + + E + ++GP L +Y M+ A+ VH
Sbjct: 63 LHGDHLYGLIGLLASRSLRNTEPTPLELYGPPGLDRYFRGIME-----ASPVHLQ----- 112
Query: 160 PSSDASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITG 219
P K + ++ ++E +S + K S Y E TG
Sbjct: 113 ------YPLEIKIVSEGVIYEDEEIVVSCRMAKHRVP----------SFAYAVMEKEKTG 156
Query: 220 KFDPKKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPG-PLVLLVDCPTE 278
F ++A G+ GP + L+ G+ V + ++ D +G PG +V D
Sbjct: 157 AFQVERAKQAGVPSGPLFGALKRGEQVTLEDGRVL-DGKDFVGEPQPGRKIVFSGDTEPS 215
Query: 279 SHVLELLSAESLNSYYADFS 298
VLEL L + A ++
Sbjct: 216 QAVLELAKGADLLVHEATYA 235
>sp|Q1DEJ2|RNZ_MYXXD Ribonuclease Z OS=Myxococcus xanthus (strain DK 1622) GN=rnz PE=3
SV=1
Length = 307
Score = 117 bits (292), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 105/345 (30%), Positives = 153/345 (44%), Gaps = 57/345 (16%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKL 551
L + LGT ++QP+ +RN+S + V S LL DCGEG+ Q+ R YG AV
Sbjct: 4 LRLTFLGTSAAQPTLHRNLSGLAVKAHSD-LLLFDCGEGSQRQMVR-YGTGFTVDAV--- 58
Query: 552 RCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQF 611
+ +H HADH+ G I+ R L EP+ + GP KR L L M F
Sbjct: 59 ---FFTHFHADHYLG---IIGFLRTLGMTGRSEPIHLYGPPSAKRLLHQAVHLGVESMSF 112
Query: 612 LHCRYTREASWNDF-EGNGEPVKNLSTPGSPFSTEGLINKTEANLFA------KGSCMQS 664
++ +G+ P K G G+ ++ A +A G
Sbjct: 113 -------PVEIHELKDGDVVPRK-----GYAVHAVGVDHRINALGYALVEDDRPGRFNLD 160
Query: 665 VWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGK 724
V + G+P +F L+ + V E G T+ V+ P+
Sbjct: 161 VARSLGVP--EGPSFGKLQRGEPVTLEDG-RTVKPEDVLGAPR----------------- 200
Query: 725 VIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSS 784
PG ++V SGDTRPCP LV+A++ A +L+HE+TF D E A+ HST +EA V
Sbjct: 201 --PGRRLVISGDTRPCPALVKAAKDADLLVHESTFSDDEQERAVETRHSTAREAARVARE 258
Query: 785 AGVYRIILTHFSQRYPKIPV-----VDETHMHKTCIAFDLMSINL 824
AG R++LTH S R+ P E + +AFD ++ L
Sbjct: 259 AGARRLVLTHLSSRHDTDPSKLLTQAREEYQGPVEVAFDGFTVEL 303
Score = 40.8 bits (94), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 32/199 (16%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
+F+ GEG QR + + VD +F + ++ G+ G L TL G+ ++++G
Sbjct: 34 LLFDCGEGSQRQMVRYGTGFT-VDAVFFTHFHADHYLGIIGFLRTL-GMTGRSEPIHLYG 91
Query: 131 PSDLKYLV-DAMKSFIPHAAM-VHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
P K L+ A+ + + V H D + A H + VD+ + +
Sbjct: 92 PPSAKRLLHQAVHLGVESMSFPVEIHEL-----KDGDVVPRKGYAVHAVGVDHRINALGY 146
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
L++ D P G+F+ A +LG+ GP + +LQ G+ V
Sbjct: 147 ALVE----DDRP------------------GRFNLDVARSLGVPEGPSFGKLQRGEPVTL 184
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ V P DVLG PG
Sbjct: 185 ED-GRTVKPEDVLGAPRPG 202
>sp|O27859|RNZ_METTH Ribonuclease Z OS=Methanothermobacter thermautotrophicus (strain
ATCC 29096 / DSM 1053 / JCM 10044 / NBRC 100330 / Delta
H) GN=rnz PE=3 SV=1
Length = 307
Score = 113 bits (282), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 98/344 (28%), Positives = 156/344 (45%), Gaps = 58/344 (16%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKL 551
+E+ LGT S+ PSK RN +SI + + + L DCGEGT +R+ + G K+
Sbjct: 2 MEVTFLGTSSAVPSKNRNHTSIALRIPGE-IFLFDCGEGT----QRQMALAGISPM--KV 54
Query: 552 RCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLE----DL 607
I+I+H+H DH G+ ++ + +G EPL + GP + + ++ D
Sbjct: 55 TRIFITHLHGDHILGIPGMI--QSMGFRG-REEPLDIYGPPGIHELHECIMKMGYFTLDF 111
Query: 608 DMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWK 667
D+ R +D+ P + ++F C + K
Sbjct: 112 DINVHEVRGGTVVEEDDYRVTSAPASH-------------------SVFNLAYCFEE-KK 151
Query: 668 GPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERI----NSVG 723
P + L+ GL+ +F +H G ++ +RI +G
Sbjct: 152 RP-------------RFLREKAIALGLKPGPAFGKLH----RGIPVRVGDRIIMPEEVLG 194
Query: 724 KVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGS 783
G K+ YSGDTRPC +++ + GA +LIHE+T E G ++A HST +EA +V
Sbjct: 195 SPRKGVKVCYSGDTRPCESVIKLAEGAELLIHESTLEAGSEDKAAESGHSTAREAAEVAR 254
Query: 784 SAGVYRIILTHFSQRYPKIPVVDETHMH---KTCIAFDLMSINL 824
SAGV R+ILTH S RY + V+ E T +A DLM++ +
Sbjct: 255 SAGVKRLILTHLSTRYKRTEVILEAARQVFPVTDVADDLMTVEV 298
Score = 47.0 bits (110), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 91/202 (45%), Gaps = 29/202 (14%)
Query: 61 SVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIG 120
S+ L + F+F+ GEG QR I KV IF++ + + G+PG++ ++ G
Sbjct: 22 SIALRIPGEIFLFDCGEGTQRQMALAGISPMKVTRIFITHLHGDHILGIPGMIQSMGFRG 81
Query: 121 DEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVD 180
E ++++GP + L H ++ F + D + + +V+
Sbjct: 82 REE-PLDIYGPPGIHEL---------HECIMKMGYF----TLDFDI--NVHEVRGGTVVE 125
Query: 181 NELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYREL 240
+ ++++ +P ++ Y C + +F +KA+ALGLKPGP + +L
Sbjct: 126 EDDYRVTS----------APASHSVFNLAY-CFEEKKRPRFLREKAIALGLKPGPAFGKL 174
Query: 241 QSGKSVKSDTLDIMVHPSDVLG 262
G V+ D ++ P +VLG
Sbjct: 175 HRGIPVRVG--DRIIMPEEVLG 194
>sp|Q3AHP8|RNZ_SYNSC Ribonuclease Z OS=Synechococcus sp. (strain CC9605) GN=rnz PE=3
SV=1
Length = 319
Score = 113 bits (282), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 101/347 (29%), Positives = 157/347 (45%), Gaps = 49/347 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSL-LLDCGEGTLGQLKRRYGVEGADSAVRK 550
+++ LGT S P++ RNVS++ + L + + L DCGEGT Q R +D + +
Sbjct: 1 MQVTFLGTSSGVPTRARNVSAVALRLPQRSEMWLFDCGEGTQHQFLR------SDLRLSQ 54
Query: 551 LRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQ 610
LR ++I+H+H DH GL +LA L G + + GP PL+ YL+ R +
Sbjct: 55 LRRVFITHMHGDHVFGLPGLLASLG--LAGSSSAGVDLYGPDPLESYLNGVLRTSSTRIG 112
Query: 611 F-LHCRYTREASWND---FEGNGEPVK-NLSTPGSPFSTEGLINKTEANLFAKGSCMQSV 665
+ L R+A+ FE + V+ L T P + K A F +
Sbjct: 113 YPLAVHRVRDAAEQGTLLFEDDDFTVRCTLLTHRVPAYAYRIEQKPLAGRF-------DI 165
Query: 666 WKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV 725
K + + + LK + V E G ++ + + G+
Sbjct: 166 EKARELNIPPGPVYAQLKRGETVTLEDG--------------------RSIDGTSLCGEE 205
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
PG +VY DT C +E +RGA +LIHE+TF G E A K HST+ A + A
Sbjct: 206 RPGVSVVYCTDTVFCEAAIELARGADLLIHESTFAHGEAEMAFQKQHSTSTMAAQTAAEA 265
Query: 786 GVYRIILTHFSQRY----PKIP--VVDETH--MHKTCIAFDLMSINL 824
GV +++LTH S RY P P +++E T +A D +SI++
Sbjct: 266 GVGQLVLTHLSPRYVLGNPVTPQDLLNEAKAIFPNTLLAKDFLSIDV 312
Score = 59.3 bits (142), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 46 VQILGT--GMDTQDTSPSVLLFFDNQR---FIFNAGEGLQRFCTEHKIKLSKVDHIFLSR 100
V LGT G+ T+ + S + QR ++F+ GEG Q ++LS++ +F++
Sbjct: 3 VTFLGTSSGVPTRARNVSAVALRLPQRSEMWLFDCGEGTQHQFLRSDLRLSQLRRVFITH 62
Query: 101 VCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAP 160
+ + GLPGLL +L G V+++GP D ++S++ + G P
Sbjct: 63 MHGDHVFGLPGLLASLGLAGSSSAGVDLYGP-------DPLESYLNGVLRTSSTRIG-YP 114
Query: 161 SSDASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGK 220
+ + D+A+ +L +++ + LL + Y E + G+
Sbjct: 115 LAVHRVRDAAEQGT--LLFEDDDFTVRCTLLTHRVP----------AYAYRIEQKPLAGR 162
Query: 221 FDPKKAVALGLKPGPKYRELQSGKSV 246
FD +KA L + PGP Y +L+ G++V
Sbjct: 163 FDIEKARELNIPPGPVYAQLKRGETV 188
>sp|C4L3C2|RNZ_EXISA Ribonuclease Z OS=Exiguobacterium sp. (strain ATCC BAA-1283 / AT1b)
GN=rnz PE=3 SV=1
Length = 301
Score = 107 bits (267), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 92/317 (29%), Positives = 146/317 (46%), Gaps = 56/317 (17%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKL 551
+++ LGTGS PSK RNVS + ++L S + L+DCGEGT Q+ RK+
Sbjct: 1 MKLQFLGTGSGMPSKQRNVSGLALDL-SNVTWLIDCGEGTQHQMLY------TKIKPRKV 53
Query: 552 RCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQF 611
+W++H+H DH GL L+ R L G PL V GP LK++L+A
Sbjct: 54 TAVWVTHLHGDHVFGLPGFLST-RSALDGTA--PLTVYGPKGLKKWLEA----------- 99
Query: 612 LHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINK-TEANLFAKGSCMQSVWK--- 667
L GS E + + ++ + F + + +V K
Sbjct: 100 ----------------------TLRVTGSHLGYELTVTEYSDGDTFIQDDHLVTVRKLEH 137
Query: 668 ---GPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGK 724
G +D +L+ +++ E G+ + + + F F K + V +
Sbjct: 138 RFPSFGFRIDGPEKPGMLR--VDLVRELGVPSGPIYRTIKESDRFEFEGKWYDSKEYVTE 195
Query: 725 VIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAK--NHSTTKEAIDVG 782
IPG + GDT PC + + GA +L+HEATF + E+A+A+ HSTT+EA +
Sbjct: 196 PIPGKIVAILGDTIPCENARKLADGADLLVHEATFMEA--EQALARKYGHSTTREATALA 253
Query: 783 SSAGVYRIILTHFSQRY 799
++ V ++I+TH S RY
Sbjct: 254 NACAVGKLIVTHISARY 270
Score = 42.4 bits (98), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 50/199 (25%), Positives = 81/199 (40%), Gaps = 29/199 (14%)
Query: 46 VQILGTGM---DTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVC 102
+Q LGTG Q + L N ++ + GEG Q KIK KV ++++ +
Sbjct: 3 LQFLGTGSGMPSKQRNVSGLALDLSNVTWLIDCGEGTQHQMLYTKIKPRKVTAVWVTHLH 62
Query: 103 SETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSS 162
+ GLPG L T + + D + V+GP LK ++A + +H +
Sbjct: 63 GDHVFGLPGFLSTRSAL-DGTAPLTVYGPKGLKKWLEAT------LRVTGSHLGYELTVT 115
Query: 163 DASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFD 222
+ S D+ +H++ V + + + DG P KPG V V E
Sbjct: 116 EYSDGDTFIQDDHLVTVRKLEHRFPSFGFR---IDG-PEKPGMLRVDLVRE--------- 162
Query: 223 PKKAVALGLKPGPKYRELQ 241
LG+ GP YR ++
Sbjct: 163 ------LGVPSGPIYRTIK 175
>sp|B5XNW7|RBN_KLEP3 Ribonuclease BN OS=Klebsiella pneumoniae (strain 342) GN=rbn PE=3
SV=1
Length = 306
Score = 106 bits (265), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 94/324 (29%), Positives = 138/324 (42%), Gaps = 65/324 (20%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLF--SKGSL-LLDCGEGTLGQLKRRYGVEGADSAV 548
+E+ LGT + P++ RN++SI +NL ++ + L DCGEGT Q G
Sbjct: 1 MELTFLGTSAGVPTRTRNMTSIILNLQQPTRAEMWLFDCGEGTQHQFLHTPYHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+I+H+H DH GL +L R +P L + GP LK +++ RL
Sbjct: 56 -KLNKIFITHLHGDHLFGLPGLLCSRSMQGNSLP---LTLYGPKGLKEFVETALRLS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLST-PGSPFSTEGLINKTEANLFAKGSCMQSVWK 667
SW D+ P+ + PG F EG T L C +
Sbjct: 109 -----------GSWTDY-----PLTIIEVGPGLVFDEEG-YRVTAYPLSHPVECYGYRIE 151
Query: 668 GPGIPVDNNAA------------FPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKA 715
P +AA F LK + V E G +
Sbjct: 152 QHDKPGTLDAAQLIADGVPPGPLFHQLKRGQRVTLEDG--------------------RV 191
Query: 716 AERINSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTT 775
+ +G PG + GDT PCP+ +E +RGA V++HE T E M E+A ++ HS++
Sbjct: 192 IDGSRYLGPATPGKTLAIFGDTAPCPQALEMARGADVMVHETTLEQAMAEKANSRGHSSS 251
Query: 776 KEAIDVGSSAGVYRIILTHFSQRY 799
++ + AGV +I THFS RY
Sbjct: 252 QQTAALAKEAGVGTLIATHFSSRY 275
Score = 47.4 bits (111), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 27/199 (13%)
Query: 69 QRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNV 128
+ ++F+ GEG Q K++ IF++ + + GLPGLL + + G+ L + +
Sbjct: 33 EMWLFDCGEGTQHQFLHTPYHPGKLNKIFITHLHGDHLFGLPGLLCSRSMQGNS-LPLTL 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP LK V+ S P + ++ D E +++A
Sbjct: 92 YGPKGLKEFVETALRL---------------SGSWTDYPLTIIEVGPGLVFDEEGYRVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
L PV+ Y E + G D + +A G+ PGP + +L+ G+ V
Sbjct: 137 YPLS------HPVE----CYGYRIEQHDKPGTLDAAQLIADGVPPGPLFHQLKRGQRVTL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ + + S LGP+ PG
Sbjct: 187 EDGRV-IDGSRYLGPATPG 204
>sp|A6TBW1|RBN_KLEP7 Ribonuclease BN OS=Klebsiella pneumoniae subsp. pneumoniae (strain
ATCC 700721 / MGH 78578) GN=rbn PE=3 SV=1
Length = 306
Score = 106 bits (264), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 95/325 (29%), Positives = 145/325 (44%), Gaps = 67/325 (20%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLF--SKGSL-LLDCGEGTLGQLKRRYGVEGADSAV 548
+E+ LGT + P++ RN++SI +NL ++ + L DCGEGT Q G
Sbjct: 1 MELTFLGTSAGVPTRTRNMTSIILNLQQPTRAEMWLFDCGEGTQHQFLHTPYHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+I+H+H DH GL +L R +P L + GP LK +++ RL
Sbjct: 56 -KLNKIFITHLHGDHLFGLPGLLCSRSMQGNSLP---LTLYGPKGLKEFVETALRLS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLST-PGSPFSTEGLINKTEANLFAKGSCMQSVWK 667
SW D+ P+ + PG F EG + A +
Sbjct: 109 -----------GSWTDY-----PLTIIEVGPGLVFDEEGY--RVTAYPLSH--------- 141
Query: 668 GPGIPVDNNAAFPLLKNLKNVLNEAGL--ETLISFPVVHCPQAFGFALKAAERIN-SVGK 724
PV+ + L+ A L + + P+ H LK +R+ + G+
Sbjct: 142 ----PVECYGYRIAQHDKPGTLDAAQLIADGVPPGPLFH-------QLKRGQRVELADGR 190
Query: 725 VI----------PGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHST 774
VI PG + GDT PCP+ +E +RGA V++HE T E M E+A ++ HS+
Sbjct: 191 VIDGSRYLGPSTPGKTLAIFGDTAPCPQALEMARGADVMVHETTLEQAMAEKANSRGHSS 250
Query: 775 TKEAIDVGSSAGVYRIILTHFSQRY 799
+++ + AGV +I THFS RY
Sbjct: 251 SQQTAALAKEAGVGTLIATHFSSRY 275
Score = 45.4 bits (106), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 82/199 (41%), Gaps = 27/199 (13%)
Query: 69 QRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNV 128
+ ++F+ GEG Q K++ IF++ + + GLPGLL + + G+ L + +
Sbjct: 33 EMWLFDCGEGTQHQFLHTPYHPGKLNKIFITHLHGDHLFGLPGLLCSRSMQGNS-LPLTL 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP LK V+ S P + ++ D E +++A
Sbjct: 92 YGPKGLKEFVETALRL---------------SGSWTDYPLTIIEVGPGLVFDEEGYRVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
L PV+ Y + G D + +A G+ PGP + +L+ G+ V+
Sbjct: 137 YPLS------HPVE----CYGYRIAQHDKPGTLDAAQLIADGVPPGPLFHQLKRGQRVEL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ + S LGPS PG
Sbjct: 187 ADGRV-IDGSRYLGPSTPG 204
>sp|O29323|RNZ_ARCFU Ribonuclease Z OS=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16
/ DSM 4304 / JCM 9628 / NBRC 100126) GN=rnz PE=3 SV=1
Length = 306
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 99/350 (28%), Positives = 148/350 (42%), Gaps = 68/350 (19%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKL 551
+I LGT + PS RN +I+V F +L DCGEGT Q+ A + R L
Sbjct: 3 FKITFLGTSGTIPSVERNSPAIFVQ-FGGQRMLFDCGEGTQRQMMI------AKTGFRNL 55
Query: 552 RCIWISHIHADHHA---GLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
I+I+H+H DH GL ++L + + P V + + Y++L + D
Sbjct: 56 DNIFITHLHTDHFIGLFGLIETMSLNERSRELNVYSPRAEVLRALFEAF--GYDQL-NYD 112
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
++ + +GE VK F TE ++ K
Sbjct: 113 IRVRELK------------DGEEVKFDGFKVVAFRTEHIV------------------KS 142
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
G + N + + N E + P P L E I G+ I
Sbjct: 143 VGYAIIEN-------DRRGKFNREKAEKELGIP----PGPLYAKLARGESIVWKGRTITP 191
Query: 728 ---------GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEA 778
G K+VY+GD+RP VE +R A +LIH+A+F++ + + AI HST KEA
Sbjct: 192 DMVLGEKRRGRKVVYTGDSRPTKRTVEIARNADILIHDASFKEELKDWAIESGHSTAKEA 251
Query: 779 IDVGSSAGVYRIILTHFSQRYPK--IPVVDETH--MHKTCIAFDLMSINL 824
+V A V ++ILTH S RY K P+++E T IA D MS+ +
Sbjct: 252 AEVAREANVKKLILTHISTRYSKDASPLLEEAKKVFENTIIAEDFMSLEV 301
Score = 52.4 bits (124), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 43 LSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVC 102
++++ GT + SP++ + F QR +F+ GEG QR K +D+IF++ +
Sbjct: 5 ITFLGTSGTIPSVERNSPAIFVQFGGQRMLFDCGEGTQRQMMIAKTGFRNLDNIFITHLH 64
Query: 103 SETAGGLPGLLLTLAGIGDEGLSVNVWGPSD--LKYLVDAMKSFIPHAAMVHTHCFG-PA 159
++ GL GL+ T++ + + +NV+ P L+ L +A FG
Sbjct: 65 TDHFIGLFGLIETMS-LNERSRELNVYSPRAEVLRALFEA---------------FGYDQ 108
Query: 160 PSSDASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGET-----SVIYVCEL 214
+ D + + L D E K DG V T SV Y
Sbjct: 109 LNYDIRVRE---------LKDGEEVKF----------DGFKVVAFRTEHIVKSVGYAIIE 149
Query: 215 PEITGKFDPKKA-VALGLKPGPKYRELQSGKSV--KSDTLDIMVHPSDVLGPSLPGPLVL 271
+ GKF+ +KA LG+ PGP Y +L G+S+ K T + P VLG G V+
Sbjct: 150 NDRRGKFNREKAEKELGIPPGPLYAKLARGESIVWKGRT----ITPDMVLGEKRRGRKVV 205
>sp|Q0TFH3|RBN_ECOL5 Ribonuclease BN OS=Escherichia coli O6:K15:H31 (strain 536 / UPEC)
GN=rbn PE=3 SV=1
Length = 305
Score = 106 bits (264), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 89/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGIV-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLDDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC +E ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 44.3 bits (103), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
D ++ +D L +PG
Sbjct: 187 DD-GRQINGADYLAAPVPG 204
>sp|B7NNU8|RBN_ECO7I Ribonuclease BN OS=Escherichia coli O7:K1 (strain IAI39 / ExPEC)
GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (263), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGIV-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQALKAGKTI--MLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 40.0 bits (92), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 82/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIVQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++ L++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQALKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|B7MXV1|RBN_ECO81 Ribonuclease BN OS=Escherichia coli O81 (strain ED1a) GN=rbn PE=3
SV=1
Length = 305
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPHGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T + C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLDDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC +E ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.5 bits (101), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPHGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
D ++ +D L +PG
Sbjct: 187 DD-GRQINGADYLAAPVPG 204
>sp|B7UFT1|RBN_ECO27 Ribonuclease BN OS=Escherichia coli O127:H6 (strain E2348/69 /
EPEC) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (262), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPHGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T + C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLDDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC +E ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.9 bits (102), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPHGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
D ++ +D L +PG
Sbjct: 187 DD-GRQINGADYLAAPVPG 204
>sp|Q1R9E5|RBN_ECOUT Ribonuclease BN OS=Escherichia coli (strain UTI89 / UPEC) GN=rbn
PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPHGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T + C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLDDGRQINGADYLAVP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC +E ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPHGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
D ++ +D L +PG
Sbjct: 187 DD-GRQINGADYLAVPVPG 204
>sp|Q8FFK8|RBN_ECOL6 Ribonuclease BN OS=Escherichia coli O6:H1 (strain CFT073 / ATCC
700928 / UPEC) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPHGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T + C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLDDGRQINGADYLAVP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC +E ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPHGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
D ++ +D L +PG
Sbjct: 187 DD-GRQINGADYLAVPVPG 204
>sp|A1ADC0|RBN_ECOK1 Ribonuclease BN OS=Escherichia coli O1:K1 / APEC GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPHGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T + C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLDDGRQINGADYLAVP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC +E ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPHGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
D ++ +D L +PG
Sbjct: 187 DD-GRQINGADYLAVPVPG 204
>sp|B7MG36|RBN_ECO45 Ribonuclease BN OS=Escherichia coli O45:K1 (strain S88 / ExPEC)
GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPHGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T + C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEIFDDGLRKVTAYPMEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLDDGRQINGADYLAVP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC +E ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALELAKGVDVMVHEATLDMAMEAKANSRGHSSTRQAAALAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 42.7 bits (99), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 47/199 (23%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I D+ L K++A
Sbjct: 92 YGPHGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIF--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
D ++ +D L +PG
Sbjct: 187 DD-GRQINGADYLAVPVPG 204
>sp|P0A8V1|RBN_SHIFL Ribonuclease BN OS=Shigella flexneri GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--TLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|B6I7L2|RBN_ECOSE Ribonuclease BN OS=Escherichia coli (strain SE11) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--TLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|P0A8V0|RBN_ECOLI Ribonuclease BN OS=Escherichia coli (strain K12) GN=rbn PE=1 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--TLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|B1IXR8|RBN_ECOLC Ribonuclease BN OS=Escherichia coli (strain ATCC 8739 / DSM 1576 /
Crooks) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--TLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|A8A2D6|RBN_ECOHS Ribonuclease BN OS=Escherichia coli O9:H4 (strain HS) GN=rbn PE=3
SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--TLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|C4ZUB1|RBN_ECOBW Ribonuclease BN OS=Escherichia coli (strain K12 / MC4100 / BW2952)
GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--TLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 43.1 bits (100), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|P60195|RBN_SALTY Ribonuclease BN OS=Salmonella typhimurium (strain LT2 / SGSC1412 /
ATCC 700720) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|P60194|RBN_SALTI Ribonuclease BN OS=Salmonella typhi GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|B5BCN2|RBN_SALPK Ribonuclease BN OS=Salmonella paratyphi A (strain AKU_12601) GN=rbn
PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|A9N598|RBN_SALPB Ribonuclease BN OS=Salmonella paratyphi B (strain ATCC BAA-1250 /
SPB7) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|Q5PN69|RBN_SALPA Ribonuclease BN OS=Salmonella paratyphi A (strain ATCC 9150 /
SARB42) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|B4TBI0|RBN_SALHS Ribonuclease BN OS=Salmonella heidelberg (strain SL476) GN=rbn PE=3
SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|B5FPF2|RBN_SALDC Ribonuclease BN OS=Salmonella dublin (strain CT_02021853) GN=rbn
PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|Q57M43|RBN_SALCH Ribonuclease BN OS=Salmonella choleraesuis (strain SC-B67) GN=rbn
PE=3 SV=2
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|B5EZJ2|RBN_SALA4 Ribonuclease BN OS=Salmonella agona (strain SL483) GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|B5R2Z4|RBN_SALEP Ribonuclease BN OS=Salmonella enteritidis PT4 (strain P125109)
GN=rbn PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEVSAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.1 bits (100), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEVSAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|C0Q055|RBN_SALPC Ribonuclease BN OS=Salmonella paratyphi C (strain RKS4594) GN=rbn
PE=3 SV=1
Length = 305
Score = 105 bits (261), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 91/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGPPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEISAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A A+ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANARGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 41.6 bits (96), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 86/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGPPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEISAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|B2TW54|RBN_SHIB3 Ribonuclease BN OS=Shigella boydii serotype 18 (strain CDC 3083-94
/ BS512) GN=rbn PE=3 SV=1
Length = 305
Score = 104 bits (260), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--MLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 42.7 bits (99), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|Q8XCZ0|RBN_ECO57 Ribonuclease BN OS=Escherichia coli O157:H7 GN=rbn PE=3 SV=2
Length = 305
Score = 104 bits (260), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 87/314 (27%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T + C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPMEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPSPLFQELKAGKTI--MLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 40.4 bits (93), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 45/199 (22%), Positives = 83/199 (41%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ P P ++EL++GK++
Sbjct: 137 Y----------PMEHPLECYGYRIEEHDKPGALNAQALKAAGVPPSPLFQELKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|B7N5N4|RBN_ECOLU Ribonuclease BN OS=Escherichia coli O17:K52:H18 (strain UMN026 /
ExPEC) GN=rbn PE=3 SV=1
Length = 305
Score = 104 bits (259), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 141/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTTFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWIDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQALKAGKTI--MLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV ++I+TH S RY
Sbjct: 262 GVGKLIITHVSSRY 275
Score = 39.3 bits (90), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLL--TLAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL +++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTTFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ F+ A + D L A I+ D+ L K++A
Sbjct: 92 YGPQ-------GIREFVETALRISGSWI------DYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++ L++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQALKAGKTIML 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
>sp|B5RCD8|RBN_SALG2 Ribonuclease BN OS=Salmonella gallinarum (strain 287/91 / NCTC
13346) GN=rbn PE=3 SV=1
Length = 305
Score = 103 bits (258), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 90/314 (28%), Positives = 133/314 (42%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I ++L G L DCGEGT Q+ G
Sbjct: 1 MELIFLGTSAGVPTRSRNVTAILLHLQHPTQPGVWLFDCGEGTQHQMLNTAFHPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G PH PL V GP ++ ++ RL
Sbjct: 56 -KLERIFISHLHGDHLFGLPGLLCSRS--MAGNPH-PLTVYGPQGVREFIATTLRL---- 107
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW DF P++ +GL T L C
Sbjct: 108 ----------SGSWTDF-----PLQIEEVSAGDILDDGLRKVTAFRLEHPLECYGYRVVE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP- 727
P NA L AG+ F + + L +IN + P
Sbjct: 153 HDKPGALNA---------RALKAAGVTPGPLFQALKAGKT--VTLADGRQINGADYLAPA 201
Query: 728 --GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
G + GDT PC + ++G V++HE T + M E+A ++ HS+T++ + A
Sbjct: 202 VAGKSVAIFGDTAPCEAALALAQGVDVMVHETTLDASMEEKANSRGHSSTRQTATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
V R+I+TH S RY
Sbjct: 262 AVGRLIMTHISSRY 275
Score = 43.5 bits (101), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 29/203 (14%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130
++F+ GEG Q K++ IF+S + + GLPGLL + + G+ + V+G
Sbjct: 35 WLFDCGEGTQHQMLNTAFHPGKLERIFISHLHGDHLFGLPGLLCSRSMAGNPH-PLTVYG 93
Query: 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAIL 190
P ++ + +D L SA I+ D+ L K++A
Sbjct: 94 PQGVREFIATTLRL-------------SGSWTDFPLQIEEVSAGDIL--DDGLRKVTAFR 138
Query: 191 LKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVK-SD 249
L+ P E V E + G + + A G+ PGP ++ L++GK+V +D
Sbjct: 139 LE---------HPLECYGYRVVE-HDKPGALNARALKAAGVTPGPLFQALKAGKTVTLAD 188
Query: 250 TLDIMVHPSDVLGPSLPGPLVLL 272
I + +D L P++ G V +
Sbjct: 189 GRQI--NGADYLAPAVAGKSVAI 209
>sp|B7M5V1|RBN_ECO8A Ribonuclease BN OS=Escherichia coli O8 (strain IAI1) GN=rbn PE=3
SV=1
Length = 305
Score = 103 bits (258), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 88/314 (28%), Positives = 140/314 (44%), Gaps = 45/314 (14%)
Query: 492 LEIVLLGTGSSQPSKYRNVSSIYVNL---FSKGSLLLDCGEGTLGQLKRRYGVEGADSAV 548
+E++ LGT + P++ RNV++I +NL G L DCGEGT QL G
Sbjct: 1 MELIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPG----- 55
Query: 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLD 608
KL I+ISH+H DH GL +L R + G+ +PL + GP ++ +++ R+
Sbjct: 56 -KLDKIFISHLHGDHLFGLPGLLCSRS--MSGII-QPLTIYGPQGIREFVETALRIS--- 108
Query: 609 MQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKG 668
SW D+ P++ + +GL T L C +
Sbjct: 109 -----------GSWTDY-----PLEIVEIGAGEILDDGLRKVTAYPLEHPLECYGYRIEE 152
Query: 669 PGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKV--- 725
P NA L AG+ F + + L+ +IN +
Sbjct: 153 HDKPGALNA---------QALKAAGVPPGPLFQELKAGKTI--TLEDGRQINGADYLAAP 201
Query: 726 IPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSA 785
+PG + GDT PC ++ ++G V++HEAT + M +A ++ HS+T++A + A
Sbjct: 202 VPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKANSRGHSSTRQAATLAREA 261
Query: 786 GVYRIILTHFSQRY 799
GV +I+TH S RY
Sbjct: 262 GVGMLIITHVSSRY 275
Score = 43.1 bits (100), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/199 (23%), Positives = 84/199 (42%), Gaps = 31/199 (15%)
Query: 71 FIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT--LAGIGDEGLSVNV 128
++F+ GEG Q K+D IF+S + + GLPGLL + ++GI + +
Sbjct: 35 WLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSRSMSGIIQ---PLTI 91
Query: 129 WGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISA 188
+GP ++ V+ +D L A I+ D+ L K++A
Sbjct: 92 YGPQGIREFVETALRI-------------SGSWTDYPLEIVEIGAGEIL--DDGLRKVTA 136
Query: 189 ILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKS 248
P++ Y E + G + + A G+ PGP ++EL++GK++
Sbjct: 137 Y----------PLEHPLECYGYRIEEHDKPGALNAQALKAAGVPPGPLFQELKAGKTITL 186
Query: 249 DTLDIMVHPSDVLGPSLPG 267
+ ++ +D L +PG
Sbjct: 187 ED-GRQINGADYLAAPVPG 204
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.135 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 335,360,574
Number of Sequences: 539616
Number of extensions: 14966711
Number of successful extensions: 34436
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 302
Number of HSP's successfully gapped in prelim test: 47
Number of HSP's that attempted gapping in prelim test: 32663
Number of HSP's gapped (non-prelim): 1145
length of query: 861
length of database: 191,569,459
effective HSP length: 126
effective length of query: 735
effective length of database: 123,577,843
effective search space: 90829714605
effective search space used: 90829714605
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 66 (30.0 bits)