Query 002976
Match_columns 861
No_of_seqs 523 out of 3653
Neff 8.3
Searched_HMMs 29240
Date Mon Mar 25 08:42:06 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002976.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002976hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3zwf_A Zinc phosphodiesterase 100.0 1.4E-38 4.7E-43 354.2 26.3 294 492-825 1-358 (368)
2 2cbn_A Ribonuclease Z; phospho 100.0 9E-38 3.1E-42 340.4 23.3 259 491-824 1-306 (306)
3 1y44_A Ribonuclease Z; zinc-de 100.0 1.5E-36 5.3E-41 332.9 24.4 260 492-826 1-306 (320)
4 3zwf_A Zinc phosphodiesterase 100.0 2.4E-33 8.2E-38 312.0 19.5 245 44-316 1-276 (368)
5 1zkp_A Hypothetical protein BA 100.0 6.9E-32 2.4E-36 288.2 21.8 242 489-823 22-267 (268)
6 3jxp_A Coenzyme PQQ synthesis 100.0 1.3E-32 4.3E-37 300.1 13.6 252 491-826 2-307 (321)
7 3md7_A Beta-lactamase-like; ss 100.0 2.8E-31 9.7E-36 287.1 20.4 241 489-825 26-292 (293)
8 3g1p_A Protein PHNP; C-P lyase 100.0 1.4E-32 4.9E-37 291.8 9.5 229 491-825 2-252 (258)
9 2e7y_A TRNAse Z; tRNA maturati 100.0 2.1E-28 7.1E-33 262.7 15.1 245 492-824 1-280 (280)
10 2cbn_A Ribonuclease Z; phospho 99.9 4.8E-27 1.7E-31 255.6 22.0 225 44-316 2-236 (306)
11 1y44_A Ribonuclease Z; zinc-de 99.9 1.3E-26 4.5E-31 253.9 21.3 225 44-316 1-234 (320)
12 2az4_A Hypothetical protein EF 99.8 1.7E-20 5.8E-25 213.8 16.9 221 490-800 5-265 (429)
13 3bv6_A Metal-dependent hydrola 99.8 8.2E-20 2.8E-24 204.1 18.5 231 489-825 59-349 (379)
14 3kl7_A Putative metal-dependen 99.8 1.2E-19 4.1E-24 189.1 17.6 175 489-797 27-212 (235)
15 2wyl_A L-ascorbate-6-phosphate 99.8 1.4E-19 4.8E-24 201.0 19.3 231 489-825 35-324 (360)
16 3bk2_A RNAse J, metal dependen 99.8 1.1E-18 3.8E-23 204.4 19.5 216 489-803 14-255 (562)
17 3rpc_A Possible metal-dependen 99.8 4.4E-19 1.5E-23 188.5 14.2 223 490-824 3-264 (264)
18 3iek_A Ribonuclease TTHA0252; 99.8 3.5E-19 1.2E-23 202.2 10.6 189 492-763 1-193 (431)
19 1vjn_A Zn-dependent hydrolase 99.7 8.3E-18 2.8E-22 173.2 11.4 88 692-800 83-179 (220)
20 2i7t_A Cleavage and polyadenyl 99.7 8.8E-17 3E-21 184.5 17.1 196 490-762 10-210 (459)
21 3af5_A Putative uncharacterize 99.7 5.1E-17 1.7E-21 193.5 14.5 251 489-824 186-465 (651)
22 2ycb_A Beta-CAsp RNAse, cleava 99.7 5.2E-17 1.8E-21 193.1 12.0 252 489-823 177-450 (636)
23 3zq4_A Ribonuclease J 1, RNAse 99.7 5.3E-16 1.8E-20 180.8 18.1 207 490-800 7-236 (555)
24 2p4z_A Metal-dependent hydrola 99.6 1.8E-16 6.2E-21 170.0 10.0 245 490-824 11-284 (284)
25 2xr1_A Cleavage and polyadenyl 99.6 3E-16 1E-20 186.4 12.3 194 490-762 182-386 (640)
26 2i7x_A Protein CFT2; polyadeny 99.6 1.7E-15 5.9E-20 180.9 17.0 230 492-800 1-255 (717)
27 4b87_A DNA cross-LINK repair 1 99.5 1.3E-14 4.5E-19 160.3 12.5 170 493-780 11-183 (367)
28 3md7_A Beta-lactamase-like; ss 99.5 3E-14 1E-18 153.5 11.5 149 41-213 26-202 (293)
29 3jxp_A Coenzyme PQQ synthesis 99.5 8.9E-15 3E-19 159.1 5.4 179 42-252 1-224 (321)
30 1zkp_A Hypothetical protein BA 99.5 3.6E-13 1.2E-17 143.0 13.9 144 41-216 22-171 (268)
31 2e7y_A TRNAse Z; tRNA maturati 99.5 6.9E-14 2.4E-18 149.4 8.2 195 44-316 1-211 (280)
32 3zdk_A 5' exonuclease apollo; 99.4 2.9E-13 9.8E-18 147.6 12.6 168 519-796 8-184 (336)
33 3g1p_A Protein PHNP; C-P lyase 99.4 2.4E-13 8.3E-18 143.5 9.3 171 42-259 1-194 (258)
34 1ztc_A Hypothetical protein TM 99.2 3E-11 1E-15 124.3 11.8 84 490-593 11-103 (221)
35 3dha_A N-acyl homoserine lacto 99.2 1.2E-10 4.1E-15 122.3 13.7 90 490-599 6-136 (254)
36 3aj3_A MLR6805 protein, 4-pyri 99.2 2.4E-11 8.3E-16 129.2 7.8 89 491-599 3-124 (274)
37 2r2d_A AGR_PTI_140P, Zn-depend 99.1 5.9E-11 2E-15 126.3 9.5 188 510-797 43-262 (276)
38 2bib_A CBPE, teichoic acid pho 99.1 3.9E-10 1.3E-14 132.0 16.9 69 490-573 4-100 (547)
39 3adr_A Putative uncharacterize 99.1 1.7E-10 5.7E-15 121.6 11.8 86 492-599 4-89 (261)
40 3m8t_A 'BLR6230 protein; subcl 99.1 4.9E-10 1.7E-14 120.3 12.7 83 494-601 47-134 (294)
41 1k07_A FEZ-1 beta-lactamase; m 99.0 1.6E-09 5.5E-14 114.4 13.5 76 509-600 24-103 (263)
42 2az4_A Hypothetical protein EF 99.0 4.7E-10 1.6E-14 127.4 10.0 145 43-216 6-181 (429)
43 3bk2_A RNAse J, metal dependen 99.0 5.8E-10 2E-14 130.5 9.0 142 41-216 14-171 (562)
44 3iek_A Ribonuclease TTHA0252; 98.9 7.8E-10 2.7E-14 125.3 7.5 145 44-214 1-152 (431)
45 2zwr_A Metallo-beta-lactamase 98.9 8.8E-09 3E-13 104.5 13.5 87 492-601 1-87 (207)
46 2i7t_A Cleavage and polyadenyl 98.9 1.8E-09 6.2E-14 123.6 8.4 93 41-141 9-106 (459)
47 1p9e_A Methyl parathion hydrol 98.9 1E-09 3.5E-14 120.0 5.9 97 488-599 51-180 (331)
48 1sml_A Protein (penicillinase) 98.9 1E-08 3.5E-13 108.5 13.1 76 509-600 37-116 (269)
49 4efz_A Metallo-beta-lactamase 98.9 1.5E-08 5.2E-13 109.0 14.2 89 490-602 3-106 (298)
50 3zq4_A Ribonuclease J 1, RNAse 98.8 4.4E-09 1.5E-13 122.5 10.0 138 43-216 8-156 (555)
51 3l6n_A Metallo-beta-lactamase; 98.8 6.4E-09 2.2E-13 106.4 9.4 75 510-600 31-107 (219)
52 1e5d_A Rubredoxin\:oxygen oxid 98.8 9.1E-09 3.1E-13 115.6 11.5 78 510-601 35-113 (402)
53 2xf4_A Hydroxyacylglutathione 98.8 1.1E-08 3.8E-13 103.9 11.1 74 510-599 13-87 (210)
54 3esh_A Protein similar to meta 98.8 5.1E-09 1.7E-13 111.6 7.4 76 510-599 48-142 (280)
55 1ycg_A Nitric oxide reductase; 98.8 1.4E-08 4.7E-13 114.0 11.0 78 510-601 36-114 (398)
56 2ycb_A Beta-CAsp RNAse, cleava 98.8 1.2E-08 4.1E-13 121.1 10.8 92 41-141 177-276 (636)
57 2ohh_A Type A flavoprotein FPR 98.8 1.4E-08 4.9E-13 114.1 10.9 80 510-601 35-117 (404)
58 2gcu_A Putative hydroxyacylglu 98.8 2E-08 6.8E-13 104.8 11.1 80 491-593 2-87 (245)
59 2qed_A Hydroxyacylglutathione 98.8 1.9E-08 6.4E-13 105.8 10.9 80 490-594 6-87 (258)
60 3kl7_A Putative metal-dependen 98.8 2.7E-08 9.1E-13 103.1 11.6 130 39-217 25-155 (235)
61 2wyl_A L-ascorbate-6-phosphate 98.8 5.1E-08 1.8E-12 107.8 14.2 122 39-194 33-185 (360)
62 3af5_A Putative uncharacterize 98.7 1.2E-08 4.3E-13 121.2 9.5 95 39-141 184-291 (651)
63 3hnn_A Putative diflavin flavo 98.7 2.8E-08 9.7E-13 104.7 11.2 77 511-601 44-121 (262)
64 1qh5_A Glyoxalase II, protein 98.7 4.3E-08 1.5E-12 103.2 12.1 76 492-592 1-79 (260)
65 2p18_A Glyoxalase II; metallop 98.7 6.4E-08 2.2E-12 104.6 13.7 91 490-593 27-124 (311)
66 4ad9_A Lactb2, beta-lactamase- 98.7 2E-08 6.8E-13 107.5 9.3 73 494-573 17-93 (289)
67 2i7x_A Protein CFT2; polyadeny 98.7 2.1E-08 7.1E-13 119.9 10.0 90 44-140 1-99 (717)
68 4ax1_B Metallo-beta-lactamase 98.7 4E-08 1.4E-12 105.6 11.0 77 509-601 57-137 (303)
69 2vw8_A PA1000, PQSE; quinolone 98.7 3.3E-08 1.1E-12 106.5 10.2 76 509-599 23-103 (303)
70 3bv6_A Metal-dependent hydrola 98.7 5.8E-08 2E-12 108.0 12.4 123 38-194 56-209 (379)
71 1m2x_A Class B carbapenemase B 98.7 5.1E-08 1.7E-12 100.0 11.0 74 510-600 27-103 (223)
72 1a7t_A Metallo-beta-lactamase; 98.7 7.6E-08 2.6E-12 99.4 11.8 75 510-601 37-114 (232)
73 2xr1_A Cleavage and polyadenyl 98.7 1.6E-08 5.5E-13 119.9 7.3 91 41-140 181-278 (640)
74 2zo4_A Metallo-beta-lactamase 98.7 5.9E-08 2E-12 105.2 11.1 77 507-600 19-101 (317)
75 3m8t_A 'BLR6230 protein; subcl 98.7 4.8E-08 1.7E-12 104.6 10.3 137 46-215 47-189 (294)
76 1xm8_A Glyoxalase II; structur 98.7 3.1E-08 1.1E-12 103.9 8.4 66 510-594 12-80 (254)
77 4hl2_A Beta-lactamase NDM-1; s 98.7 4.2E-08 1.4E-12 102.1 9.2 74 510-600 48-124 (243)
78 1mqo_A Beta-lactamase II; alph 98.7 8.6E-08 2.9E-12 98.6 11.1 74 510-599 41-116 (227)
79 1sml_A Protein (penicillinase) 98.6 6.7E-08 2.3E-12 102.2 9.2 129 58-214 37-171 (269)
80 3q6v_A Beta-lactamase; metallo 98.6 3.8E-07 1.3E-11 93.9 14.3 76 510-601 26-103 (233)
81 3tp9_A Beta-lactamase and rhod 98.6 5.8E-08 2E-12 111.5 8.7 71 491-573 3-74 (474)
82 1k07_A FEZ-1 beta-lactamase; m 98.6 1.2E-07 4.1E-12 99.8 10.3 75 58-140 24-103 (263)
83 2q9u_A A-type flavoprotein; fl 98.5 1.5E-07 5.1E-12 106.1 10.3 78 510-601 41-119 (414)
84 3dha_A N-acyl homoserine lacto 98.5 5.6E-08 1.9E-12 101.8 4.3 88 41-139 5-136 (254)
85 2p4z_A Metal-dependent hydrola 98.5 1.8E-07 6.1E-12 99.8 7.5 85 43-134 12-103 (284)
86 3iog_A Beta-lactamase; hydrola 98.5 1.1E-06 3.8E-11 90.0 12.9 76 510-601 23-100 (227)
87 2y8b_A Metallo-B-lactamase; hy 98.4 7.4E-07 2.5E-11 94.0 11.4 75 509-600 67-144 (265)
88 1ztc_A Hypothetical protein TM 98.4 1.3E-07 4.4E-12 97.0 5.0 81 42-133 11-103 (221)
89 3aj3_A MLR6805 protein, 4-pyri 98.4 1.1E-07 3.7E-12 100.8 4.5 87 42-139 2-124 (274)
90 1jjt_A IMP-1 metallo beta-lact 98.4 6.2E-07 2.1E-11 92.3 10.0 74 510-600 33-108 (228)
91 2fhx_A SPM-1; metallo-beta-lac 98.4 1.1E-06 3.9E-11 91.2 12.0 77 510-601 30-108 (246)
92 4ax1_B Metallo-beta-lactamase 98.4 3.2E-07 1.1E-11 98.5 7.6 75 58-140 57-136 (303)
93 3h3e_A Uncharacterized protein 98.4 1.5E-06 5.1E-11 91.0 12.3 91 728-826 172-267 (267)
94 3adr_A Putative uncharacterize 98.4 5.1E-07 1.8E-11 94.7 8.3 84 44-138 4-88 (261)
95 2zwr_A Metallo-beta-lactamase 98.4 4.3E-07 1.5E-11 91.9 7.4 83 44-140 1-86 (207)
96 4efz_A Metallo-beta-lactamase 98.3 2.8E-06 9.6E-11 91.2 12.9 138 44-216 5-160 (298)
97 3r2u_A Metallo-beta-lactamase 98.3 7.3E-07 2.5E-11 101.9 8.7 80 490-593 23-105 (466)
98 3rpc_A Possible metal-dependen 98.3 7.4E-07 2.5E-11 93.9 7.8 112 42-195 3-134 (264)
99 4dik_A Flavoprotein; TM0755, e 98.3 2.3E-06 7.9E-11 95.6 10.9 80 511-602 53-133 (410)
100 2bib_A CBPE, teichoic acid pho 98.2 4.8E-06 1.7E-10 97.2 13.6 80 42-133 4-111 (547)
101 3l6n_A Metallo-beta-lactamase; 98.2 1.3E-06 4.4E-11 89.0 7.4 74 58-140 30-107 (219)
102 2xf4_A Hydroxyacylglutathione 98.2 2.6E-06 8.9E-11 86.2 9.1 82 44-139 1-87 (210)
103 2gcu_A Putative hydroxyacylglu 98.2 4.1E-06 1.4E-10 87.1 10.4 80 42-134 1-88 (245)
104 2r2d_A AGR_PTI_140P, Zn-depend 98.2 6.7E-07 2.3E-11 94.7 3.8 70 60-140 44-140 (276)
105 4eyb_A Beta-lactamase NDM-1; m 98.2 4.4E-06 1.5E-10 88.2 9.9 74 510-599 75-150 (270)
106 2ohh_A Type A flavoprotein FPR 98.2 4.2E-06 1.4E-10 93.7 10.2 116 59-212 35-160 (404)
107 1xm8_A Glyoxalase II; structur 98.2 2.6E-06 9E-11 89.1 7.6 66 58-134 11-80 (254)
108 1e5d_A Rubredoxin\:oxygen oxid 98.1 3.5E-06 1.2E-10 94.3 8.9 74 59-141 35-113 (402)
109 1ycg_A Nitric oxide reductase; 98.1 5.2E-06 1.8E-10 92.8 9.2 73 59-140 36-113 (398)
110 2qed_A Hydroxyacylglutathione 98.1 3E-06 1E-10 88.9 5.9 78 43-134 7-87 (258)
111 1m2x_A Class B carbapenemase B 98.0 1E-05 3.5E-10 82.7 9.3 69 59-139 27-102 (223)
112 4b87_A DNA cross-LINK repair 1 98.0 1.6E-06 5.6E-11 95.5 3.3 110 55-215 23-132 (367)
113 2p18_A Glyoxalase II; metallop 98.0 2.2E-05 7.6E-10 84.6 11.7 85 44-133 29-124 (311)
114 3tp9_A Beta-lactamase and rhod 98.0 4.6E-06 1.6E-10 95.6 5.8 126 44-215 4-135 (474)
115 1p9e_A Methyl parathion hydrol 98.0 3E-06 1E-10 92.4 3.8 73 60-138 98-179 (331)
116 1mqo_A Beta-lactamase II; alph 97.9 2.2E-05 7.5E-10 80.4 9.8 70 59-139 41-116 (227)
117 1qh5_A Glyoxalase II, protein 97.9 7.1E-06 2.4E-10 86.1 6.2 75 44-132 1-79 (260)
118 1a7t_A Metallo-beta-lactamase; 97.9 1E-05 3.6E-10 83.2 7.3 71 59-140 37-113 (232)
119 2zo4_A Metallo-beta-lactamase 97.9 4.7E-06 1.6E-10 90.1 4.4 75 57-140 20-101 (317)
120 2p97_A Hypothetical protein; p 97.9 9.1E-06 3.1E-10 81.7 6.0 67 509-595 23-89 (201)
121 3esh_A Protein similar to meta 97.9 4.1E-06 1.4E-10 88.9 3.0 74 60-138 49-141 (280)
122 2vw8_A PA1000, PQSE; quinolone 97.8 1.6E-05 5.6E-10 85.3 5.7 73 58-138 23-102 (303)
123 4hl2_A Beta-lactamase NDM-1; s 97.8 6.7E-06 2.3E-10 85.3 2.3 69 59-139 48-123 (243)
124 3iog_A Beta-lactamase; hydrola 97.8 1.5E-05 5E-10 81.5 4.8 74 58-140 22-99 (227)
125 4ad9_A Lactb2, beta-lactamase- 97.7 2.2E-05 7.5E-10 83.6 5.5 80 46-132 17-106 (289)
126 3r2u_A Metallo-beta-lactamase 97.7 1.6E-05 5.3E-10 90.8 4.2 125 44-215 25-155 (466)
127 3q6v_A Beta-lactamase; metallo 97.7 1.5E-05 5.2E-10 81.8 3.5 75 58-141 25-103 (233)
128 3hnn_A Putative diflavin flavo 97.7 2.5E-05 8.4E-10 82.0 4.7 73 59-140 43-120 (262)
129 1jjt_A IMP-1 metallo beta-lact 97.7 1.9E-05 6.5E-10 81.0 3.7 69 59-139 33-107 (228)
130 2q9u_A A-type flavoprotein; fl 97.7 6.6E-05 2.3E-09 84.3 8.3 73 59-140 41-118 (414)
131 2y8b_A Metallo-B-lactamase; hy 97.6 3.4E-05 1.2E-09 81.2 5.3 69 59-139 68-143 (265)
132 3h3e_A Uncharacterized protein 97.6 2.8E-05 9.7E-10 81.3 4.4 74 43-133 12-91 (267)
133 1vjn_A Zn-dependent hydrolase 97.5 7.1E-05 2.4E-09 76.3 5.5 47 59-110 20-66 (220)
134 4dik_A Flavoprotein; TM0755, e 97.5 0.00023 7.8E-09 79.4 9.2 75 60-140 53-131 (410)
135 2cfu_A SDSA1; SDS-hydrolase, l 97.3 0.00018 6.3E-09 85.3 6.8 81 509-598 122-204 (658)
136 3zdk_A 5' exonuclease apollo; 97.3 0.00012 4.2E-09 79.3 4.7 92 91-217 23-114 (336)
137 2fhx_A SPM-1; metallo-beta-lac 97.3 0.00012 4.2E-09 75.6 4.0 72 58-140 29-107 (246)
138 2yhe_A SEC-alkyl sulfatase; hy 96.0 0.00013 4.4E-09 86.3 0.0 77 509-594 132-210 (668)
139 2cfu_A SDSA1; SDS-hydrolase, l 96.7 0.00045 1.5E-08 81.9 2.6 78 58-138 122-204 (658)
140 4eyb_A Beta-lactamase NDM-1; m 96.6 0.0008 2.7E-08 70.7 3.2 70 59-137 75-148 (270)
141 2p97_A Hypothetical protein; p 96.5 0.002 6.9E-08 64.3 5.3 62 59-134 24-88 (201)
142 2yhe_A SEC-alkyl sulfatase; hy 95.1 0.00087 3E-08 79.2 0.0 74 58-134 132-210 (668)
143 3e48_A Putative nucleoside-dip 23.3 1.8E+02 0.006 29.3 7.9 60 731-795 47-106 (289)
144 3e8x_A Putative NAD-dependent 23.0 1.1E+02 0.0036 30.0 5.9 61 731-793 68-129 (236)
145 3rft_A Uronate dehydrogenase; 22.3 1.4E+02 0.0046 29.9 6.7 64 730-793 45-109 (267)
No 1
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=100.00 E-value=1.4e-38 Score=354.24 Aligned_cols=294 Identities=27% Similarity=0.378 Sum_probs=197.4
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARIL 571 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll 571 (861)
|+|+|||||+++|++.|++||++|+. ++..+|||||+|++.+|.+ .+.. +.+|++|||||.|+||++|++.|+
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~-~~~~iLiD~G~g~~~~l~~-~~~~-----~~~id~I~iTH~H~DHi~gl~~l~ 73 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRC-EGECWLFDCGEGTQTQLMK-SQLK-----AGRITKIFITHLHGDHFFGLPGLL 73 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEE-TTEEEEECCCTTHHHHHHH-SSSC-----GGGEEEEECCCSSGGGTTTHHHHH
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEE-CCeEEEEeCChhHHHHHHH-cCCC-----hHHCCEEEECCCChHHhCcHHHHH
Confidence 79999999999999999999999998 7889999999999999987 4542 478999999999999999999998
Q ss_pred HHHHHhhcCC---CCCCeEEEeCchHHHHHHHHHhcccc--cc--eeeecccccccccccccCCCCCcccCCCCCCCCCc
Q 002976 572 ALRRDLLKGV---PHEPLLVVGPGPLKRYLDAYERLEDL--DM--QFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFST 644 (861)
Q Consensus 572 ~~~~~~~~g~---~~~pl~I~~p~~~~~~L~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 644 (861)
..+... +. +..++.||+|.++.++++....+... .+ .+....... .. . +....
T Consensus 74 ~~~~~~--~~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~----~~----------~--~~~~~-- 133 (368)
T 3zwf_A 74 CTISLQ--SGSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTA----DQ----------C--PAEEL-- 133 (368)
T ss_dssp HHHHHH--C------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCG----GG----------S--CC-----
T ss_pred HHhhhc--cccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCc----cc----------c--ccccc--
Confidence 765421 21 12589999999999999876543221 11 111110000 00 0 00000
Q ss_pred cccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccc-----
Q 002976 645 EGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERI----- 719 (861)
Q Consensus 645 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~----- 719 (861)
. ....+....... ...++..+.-...... ..+.+.+.++|+++|+.|..+|+||+|+..++.
T Consensus 134 ~------~~~~~~~~~~~~--~~~~g~~i~~~~~~~~-----~~~~~~~~~~V~a~~~~H~vp~~gy~i~e~~~~g~~~~ 200 (368)
T 3zwf_A 134 K------EFAHVNRADSPP--KEEQGRTILLDSEENS-----YLLFDDEQFVVKAFRLFHRIPSFGFSVVEKKRPGKLNA 200 (368)
T ss_dssp ------------------------CCCEECCBTTTTB-----EEEEECSSEEEEEEEEESSSCEEEEEEEECC-------
T ss_pred c------ccccccccccCc--ccccccccccccccCc-----eeEEeCCCEEEEEEeccCCCceEEEEEEecCCcCccCH
Confidence 0 000000000000 0000100000000000 000123668999999999999999999854210
Q ss_pred ----------------------------------cccCcccCCcEEEEeCCCCC--ChhHHhhcCCCcEEEEeccCCCCh
Q 002976 720 ----------------------------------NSVGKVIPGWKIVYSGDTRP--CPELVEASRGATVLIHEATFEDGM 763 (861)
Q Consensus 720 ----------------------------------~~~~~~~~G~ki~YsGDT~p--~~~l~~~~~~aDlLIhEaTf~d~~ 763 (861)
+.+++..+|++|+|+|||++ ++.+++.++++|+|||||||.+++
T Consensus 201 ek~~~~gip~G~~~~~Lk~G~~v~~~dG~~i~~~~v~~~~~~g~~v~~~GDT~~~~~~~~~~~~~~~Dlli~Eat~~~~~ 280 (368)
T 3zwf_A 201 QKLKDLGVPPGPAYGKLKNGISVVLENGVTISPQDVLKKPIVGRKICILGDCSGVVGDGGVKLCFEADLLIHEATLDDAQ 280 (368)
T ss_dssp -----------------------------------------CCCEEEEECSCSEECSSHHHHHTTTCSEEEEECCSCGGG
T ss_pred HHHHHcCCCchHHHHhcCCCCeEEecCCEEEEhHHhccccccceEEEEEecCCcccchhHHHHhcCCCEEEEecCCChHH
Confidence 11223345899999999999 999999999999999999999999
Q ss_pred HHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCC-----------Cccc-ccc---cCC-ceEEeeeCcEEecC
Q 002976 764 MEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPK-----------IPVV-DET---HMH-KTCIAFDLMSINLA 825 (861)
Q Consensus 764 ~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~-----------~~~~-~~~---~~~-~v~~A~D~m~i~l~ 825 (861)
.+.|..++|||++||+++|+++++|+++|||||+||.. ...+ +++ +.+ ++.+|.|||++++.
T Consensus 281 ~~~a~~~~H~t~~~A~~~a~~~~~k~lil~H~s~ry~~~~~~~~~~~~~~~~~~~ea~~~f~~~~~~~a~dg~~~~i~ 358 (368)
T 3zwf_A 281 MDKAKEHGHSTPQMAATFAKLCRAKRLVLTHFSQRYKPVALAREGETDGIAELKKQAESVLDLQEVTLAEDFMVISIP 358 (368)
T ss_dssp HHHHHHTTCCCHHHHHHHHHHTTCSEEEEECBCCCC---------------------------CEEEECCTTCEEECC
T ss_pred HhhhhcCCCCCHHHHHHHHHHcCCCEEEEEeeCcccCccccccccccchHHHHHHHHHHhcCCCceEEecCCcEEEee
Confidence 88899999999999999999999999999999999972 1222 221 223 79999999999995
No 2
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=100.00 E-value=9e-38 Score=340.44 Aligned_cols=259 Identities=31% Similarity=0.558 Sum_probs=197.8
Q ss_pred ccEEEEEecCCCCCCCCCCccEEEEEEe---CCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccH
Q 002976 491 DLEIVLLGTGSSQPSKYRNVSSIYVNLF---SKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGL 567 (861)
Q Consensus 491 ~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~---~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL 567 (861)
+|+|+||||||++|+++|+++|++|+.. ++..+|||||+|+..++.+ .+. .+.+|++|||||.|.||+.|+
T Consensus 1 ~m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~-~~~-----~~~~i~~i~iTH~H~DH~~gl 74 (306)
T 2cbn_A 1 AMNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLH-TAF-----NPGKLDKIFISHLHGDHLFGL 74 (306)
T ss_dssp CCEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHHHHHHT-SCC-----CTTTEEEEECSCCCHHHHTTH
T ss_pred CeEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHHHHHHH-hCC-----CHHHcCEEEEecCCchhhCCh
Confidence 4899999999999999999999999863 5678999999999888776 443 257899999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcccc
Q 002976 568 ARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGL 647 (861)
Q Consensus 568 ~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 647 (861)
+.++..+.. .+ +..++.||+|+.+.++++...........+. +
T Consensus 75 ~~l~~~~~~--~~-~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~~-----------------------------~----- 117 (306)
T 2cbn_A 75 PGLLCSRSM--SG-IIQPLTIYGPQGIREFVETALRISGSWTDYP-----------------------------L----- 117 (306)
T ss_dssp HHHHHHHHH--TT-CCSCEEEEESTTHHHHHHHHHHHTTCCCSSC-----------------------------E-----
T ss_pred HHHHHHHHh--cC-CCCCeEEEcCccHHHHHHHHHHhhccCCCce-----------------------------E-----
Confidence 999876532 12 3468999999999988876543211000000 0
Q ss_pred ccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccc--------
Q 002976 648 INKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERI-------- 719 (861)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~-------- 719 (861)
.... + .++..+ .+|.++|+++|+.|+.+++||+++...+-
T Consensus 118 ----~~~~------~-----~~g~~~-----------------~~~~~~v~~~~~~H~~~~~gy~i~~~~~~~~~~~~~~ 165 (306)
T 2cbn_A 118 ----EIVE------I-----GAGEIL-----------------DDGLRKVTAYPLEHPLECYGYRIEEHDAPGALNAQAL 165 (306)
T ss_dssp ----EEEE------C-----CSEEEE-----------------ECSSEEEEEEECBSSSCCEEEEEEECCCCCCBCHHHH
T ss_pred ----EEEE------c-----CCCcEe-----------------ecCCEEEEEEEccCCCCccEEEEEecCccCccCHHHH
Confidence 0000 0 011111 24667999999999999999999742100
Q ss_pred -------------------------------cccCcccCCcEEEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHHHH
Q 002976 720 -------------------------------NSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAI 768 (861)
Q Consensus 720 -------------------------------~~~~~~~~G~ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~ 768 (861)
.......+|++|+|+|||++++.+++.++++|+|||||||.+++.+.+.
T Consensus 166 ~~~gv~~~~~~~~l~~g~~v~~~~G~~~~~~~~~~~~~~g~~i~~sgDt~~~~~~~~~~~~~D~li~E~t~~~~~~~~a~ 245 (306)
T 2cbn_A 166 KAAGVPPGPLFQELKAGKTITLEDGRQINGADYLAAPVPGKALAIFGDTGPCDAALDLAKGVDVMVHEATLDITMEAKAN 245 (306)
T ss_dssp HHTTCCSSHHHHHHHHTCCCEETTTEECCGGGTBCCCCCCCEEEECCSCBSCSTHHHHHTTCSEEEEECCBCGGGHHHHH
T ss_pred HHcCCCCchHHHHhcCCCeEEcCCCcEEcHHHhcCCCCCCCEEEEeCCCCCHHHHHHHhcCCCEEEEECcCChhhHhHHh
Confidence 0001112688999999999999999999999999999999998888888
Q ss_pred hcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCCCc---cccc--ccCCceEEeeeCcEEec
Q 002976 769 AKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIP---VVDE--THMHKTCIAFDLMSINL 824 (861)
Q Consensus 769 ~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~~~---~~~~--~~~~~v~~A~D~m~i~l 824 (861)
.++|+|++||+++++++++|++||||||+||++.+ ..++ ....++.+|+|||+|.+
T Consensus 246 ~~~H~t~~~a~~~a~~~~~~~lvl~H~s~~~~~~~~~~~~~e~~~~~~~~~~a~Dg~~~~~ 306 (306)
T 2cbn_A 246 SRGHSSTRQAATLAREAGVGKLIITHVSSRYDDKGCQHLLRECRSIFPATELANDFTVFNV 306 (306)
T ss_dssp HTTCCBHHHHHHHHHHHTCSEEEEECBCTTCCHHHHHHHHHHHHTTCSCEEECCTTCEEEC
T ss_pred hcCCCCHHHHHHHHHHcCCcEEEEEeecCCCCCCchhHHHHHHHHhCCCcEEcccccEeeC
Confidence 99999999999999999999999999999998531 1221 23457999999999975
No 3
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=100.00 E-value=1.5e-36 Score=332.90 Aligned_cols=260 Identities=30% Similarity=0.497 Sum_probs=198.1
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEe--CCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLF--SKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLAR 569 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~--~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ 569 (861)
|+|+||||||++|++.||++|++|+.. ++..+|||||+++..++.+ .+. .+.+|++|||||.|.||+.|++.
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~~~~l~~-~~~-----~~~~i~~I~iTH~H~DH~~gl~~ 74 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQMLH-TTI-----KPRKIEKIFITHMHGDHVYGLPG 74 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHHHTT-SSC-----CGGGEEEEECSBCCGGGTTTHHH
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHHHHHHHH-cCC-----CHHHcCEEEEeCCChhhhCCHHH
Confidence 789999999999999999999999862 5678999999998777765 443 25789999999999999999999
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcccccc
Q 002976 570 ILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLIN 649 (861)
Q Consensus 570 ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 649 (861)
|+..+.. .+ +..++.||+|+.+.++++...........+. .
T Consensus 75 l~~~~~~--~~-~~~~~~v~~~~~~~~~l~~~~~~~~~~~~~~-----------------------------~------- 115 (320)
T 1y44_A 75 LLGSRSF--QG-GEDELTVYGPKGIKAFIETSLAVTKTHLTYP-----------------------------L------- 115 (320)
T ss_dssp HHHHHHH--TT-CCSCEEEEESTTHHHHHHHHHHHTTCCCSSC-----------------------------E-------
T ss_pred HHHHHHh--cC-CCCCEEEEeCHHHHHHHHHHHHhhccCCCCc-----------------------------e-------
Confidence 9876532 13 3467999999999988876543211000000 0
Q ss_pred ccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccc----------
Q 002976 650 KTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERI---------- 719 (861)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~---------- 719 (861)
.... + .++..+ .+|.++|+++|+.|+.+++||+++..++-
T Consensus 116 --~~~~------~-----~~g~~~-----------------~~~~~~v~~~p~~H~~~~~gy~i~~~~~~~~~~~~~~~~ 165 (320)
T 1y44_A 116 --AIQE------I-----EEGIVF-----------------EDDQFIVTAVSVIHGVEAFGYRVQEKDVPGSLKADVLKE 165 (320)
T ss_dssp --EEEE------C-----CSEEEE-----------------ECSSEEEEEEECBSSSSBEEEEEEECCBCCCC-------
T ss_pred --EEEE------c-----CCCceE-----------------ecCCEEEEEEEccCCCCcceEEEecCCCcCccCHHHHHH
Confidence 0000 0 011111 24567899999999999999999742100
Q ss_pred -----------------------------cccCcccCCcEEEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHHHHhc
Q 002976 720 -----------------------------NSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAK 770 (861)
Q Consensus 720 -----------------------------~~~~~~~~G~ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~~~ 770 (861)
..+....+|++|+|+|||++++.+.+.++++|+|||||||.+++.+.+..+
T Consensus 166 ~g~~~g~~~~~l~~g~~v~~~~G~i~~~~~~~~~~~~g~~i~~sgDt~~~~~~~~~~~~~D~li~E~t~~~~~~~~a~~~ 245 (320)
T 1y44_A 166 MNIPPGPVYQKIKKGETVTLEDGRIINGNDFLEPPKKGRSVVFSGDTRVSDKLKELARDCDVMVHEATFAKEDRKLAYDY 245 (320)
T ss_dssp -------------------------------CCCCBCCCEEEECCSCBCCHHHHHHTTTCSEEEEECCBCTTCHHHHHHT
T ss_pred cCCCCchhHHHhhCCCeEEcCCCeEEcHHHhcccCCCCCEEEEeCCCCCHHHHHHHhCCCCEEEEeccCCcchHhHHhhc
Confidence 000111267899999999999999999999999999999999988888899
Q ss_pred CCCCHHHHHHHHHHcCCCEEEEeeccCCCCCCc---cccc--ccCCceEEeeeCcEEecCC
Q 002976 771 NHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIP---VVDE--THMHKTCIAFDLMSINLAD 826 (861)
Q Consensus 771 ~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~~~---~~~~--~~~~~v~~A~D~m~i~l~~ 826 (861)
+|||++||++++++++++++||||||+||+..+ ..++ ....++.+|+|||++.++.
T Consensus 246 ~H~t~~~a~~~a~~~~~~~lil~H~s~~~~~~~~~~~~~e~~~~~~~~~~a~dg~~~~l~~ 306 (320)
T 1y44_A 246 YHSTTEQAAVTAKEARAKQLILTHISARYQGDASLELQKEAVDVFPNSVAAYDFLEVNVPR 306 (320)
T ss_dssp TCCBHHHHHHHHHHHTCSEEEEECBCTTSCTTHHHHHHHHHHHHCSSEEECCTTCEEECCC
T ss_pred CCCCHHHHHHHHHHcCCCEEEEEeEcCCCCCcchHHHHHHHHHhCCCcEeccCCCEEEecc
Confidence 999999999999999999999999999998742 1222 1245799999999999974
No 4
>3zwf_A Zinc phosphodiesterase ELAC protein 1; beta-lactamase, hydrolase, metal-binding, tRNA processing, zinc-binding, catabolism; 1.70A {Homo sapiens}
Probab=100.00 E-value=2.4e-33 Score=311.98 Aligned_cols=245 Identities=23% Similarity=0.371 Sum_probs=142.4
Q ss_pred eEEEEEeeCCCCC---CCCcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccC
Q 002976 44 SYVQILGTGMDTQ---DTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIG 120 (861)
Q Consensus 44 ~~l~~LGtgs~~~---~~~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~ 120 (861)
|+|+|||||++.+ +..+|++|+.++..+|||||+|+|+++.+.++++.+|++|||||.|+||++||++|+.++...+
T Consensus 1 M~l~~LGtg~~~p~~~r~~ss~ll~~~~~~iLiD~G~g~~~~l~~~~~~~~~id~I~iTH~H~DHi~gl~~l~~~~~~~~ 80 (368)
T 3zwf_A 1 MDVTFLGTGAAYPSPTRGASAVVLRCEGECWLFDCGEGTQTQLMKSQLKAGRITKIFITHLHGDHFFGLPGLLCTISLQS 80 (368)
T ss_dssp CEEEEEECBSSSCCSSSCSSEEEEEETTEEEEECCCTTHHHHHHHSSSCGGGEEEEECCCSSGGGTTTHHHHHHHHHHHC
T ss_pred CEEEEECCCCCCCCCCCCccEEEEEECCeEEEEeCChhHHHHHHHcCCChHHCCEEEECCCChHHhCcHHHHHHHhhhcc
Confidence 7899999997542 5689999999999999999999999999999999999999999999999999999998876543
Q ss_pred CC---CCcEEEEcCccHHHHHHHHHhhcccC-ce-eeeeecCCCCC--CC---Cc---------CCCC--c------cCC
Q 002976 121 DE---GLSVNVWGPSDLKYLVDAMKSFIPHA-AM-VHTHCFGPAPS--SD---AS---------LPDS--A------KSA 173 (861)
Q Consensus 121 ~~---~~~l~IyGP~gl~~~l~~~~~~~~~~-~~-~~~~~~~~~~~--~~---~~---------~~~~--~------~~~ 173 (861)
+. ..++.||||+++..++...+.+.... .+ +..+++..+.. .. .. ++.. . ...
T Consensus 81 ~~~~~~~~l~iygp~~~~~~l~~~l~~~~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~i~~~~~~ 160 (368)
T 3zwf_A 81 GSMVSKQPIEIYGPVGLRDFIWRTMELSHTELVFHYVVHELVPTADQCPAEELKEFAHVNRADSPPKEEQGRTILLDSEE 160 (368)
T ss_dssp ------CCEEEEEETTHHHHHHHHHHHTTCCCSSCEEEEEECCCGGGSCC-------------------CCCEECCBTTT
T ss_pred ccccCCCCeEEEEcHHHHHHHHHHHHhhCcCCCceEEEEEeecCccccccccccccccccccccCccccccccccccccc
Confidence 21 13689999999999998876654221 11 22333321100 00 00 0000 0 001
Q ss_pred CceeEeeCCcEEEEEEEcCCCCCCCCCCCCCCCeeEEEEEeCCccCCCCHHHHHHcCCCCChhhhhhcCCCcEEeCCCce
Q 002976 174 NHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKSDTLDI 253 (861)
Q Consensus 174 ~~~~~~~d~~i~V~~~~l~h~~~~~~~~~~~~~s~gY~~~~~~~~gkf~~~ka~~lGv~~g~~~~~L~~G~~V~l~dg~~ 253 (861)
....+++++.++|+++++.|. ++|+||+|++++++|||+++||+++|||+||++++||+|++|+++||+
T Consensus 161 ~~~~~~~~~~~~V~a~~~~H~----------vp~~gy~i~e~~~~g~~~~ek~~~~gip~G~~~~~Lk~G~~v~~~dG~- 229 (368)
T 3zwf_A 161 NSYLLFDDEQFVVKAFRLFHR----------IPSFGFSVVEKKRPGKLNAQKLKDLGVPPGPAYGKLKNGISVVLENGV- 229 (368)
T ss_dssp TBEEEEECSSEEEEEEEEESS----------SCEEEEEEEECC-------------------------------------
T ss_pred CceeEEeCCCEEEEEEeccCC----------CceEEEEEEecCCcCccCHHHHHHcCCCchHHHHhcCCCCeEEecCCE-
Confidence 124578889999999999997 599999999999999999999999999999999999999999999998
Q ss_pred eecCCCccCCCCCCCEEEEE-cCCChhHHHHHhhhhccccccccCCCCcccCCceeEEEEeCCC
Q 002976 254 MVHPSDVLGPSLPGPLVLLV-DCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPV 316 (861)
Q Consensus 254 ~v~p~~v~~~~~~g~~~~il-D~p~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~H~~~~ 316 (861)
+|+|+||++++++|++++|. ||.. ...+.+++ ..+++|++||++..
T Consensus 230 ~i~~~~v~~~~~~g~~v~~~GDT~~-~~~~~~~~----------------~~~~~Dlli~Eat~ 276 (368)
T 3zwf_A 230 TISPQDVLKKPIVGRKICILGDCSG-VVGDGGVK----------------LCFEADLLIHEATL 276 (368)
T ss_dssp ------------CCCEEEEECSCSE-ECSSHHHH----------------HTTTCSEEEEECCS
T ss_pred EEEhHHhccccccceEEEEEecCCc-ccchhHHH----------------HhcCCCEEEEecCC
Confidence 59999999999999999996 7633 11223322 34578999999963
No 5
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.98 E-value=6.9e-32 Score=288.18 Aligned_cols=242 Identities=19% Similarity=0.249 Sum_probs=187.7
Q ss_pred CCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHH
Q 002976 489 RDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLA 568 (861)
Q Consensus 489 ~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~ 568 (861)
...|+|+|||||+++|++.|+++|++|+. ++..+|||||.+...+|.+. . .+.+|++|||||.|.||+.|++
T Consensus 22 ~~~m~i~~LG~g~~~p~~~~~~~~~li~~-~~~~iLiD~G~~~~~~l~~~--~-----~~~~i~~v~iTH~H~DH~~gl~ 93 (268)
T 1zkp_A 22 SNAMKMTVVGFWGGFPEAGEATSGYLFEH-DGFRLLVDCGSGVLAQLQKY--I-----TPSDIDAVVLSHYHHDHVADIG 93 (268)
T ss_dssp SSCEEEEEEECBSSSCCTTCCBSEEEEEE-TTEEEEECCCTTHHHHHTTT--C-----CGGGCCEEECSCCCHHHHTTHH
T ss_pred CCCcEEEEEeCCCCcCCCCCCccEEEEEE-CCcEEEEECCHHHHHHHHHh--C-----CcccCCEEEEecCCchhhCCHH
Confidence 35799999999999999999999999998 78899999999987777652 2 2478999999999999999999
Q ss_pred HHHHHHHHhh-cCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcccc
Q 002976 569 RILALRRDLL-KGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGL 647 (861)
Q Consensus 569 ~ll~~~~~~~-~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 647 (861)
.++..+.... .+.+.+++.||+|+...++++... .... .... .
T Consensus 94 ~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~-~~~~-~~~~---------------------~------------- 137 (268)
T 1zkp_A 94 VLQYARLITSATKGQLPELPIYGHTFDENGFHSLT-HEPH-TKGI---------------------P------------- 137 (268)
T ss_dssp HHHHHHHHHHHHHCCCCCEEEEECSSSHHHHHTTC-BTTT-EEEE---------------------E-------------
T ss_pred HHHHHHHhcccccCCCCceEEEeCccHHHHHHhcc-cCCc-cceE---------------------E-------------
Confidence 9887542110 011235799999999887765431 0000 0000 0
Q ss_pred ccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccccccCcccC
Q 002976 648 INKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIP 727 (861)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~~~ 727 (861)
+ .++..+ .+|..+|+++++.|+.+++||+++. +
T Consensus 138 --------------~-----~~g~~~-----------------~~g~~~v~~~~~~H~~~~~~~~i~~-----------~ 170 (268)
T 1zkp_A 138 --------------Y-----NPEETL-----------------QIGPFSISFLKTVHPVTCFAMRITA-----------G 170 (268)
T ss_dssp --------------C-----CTTSCE-----------------EETTEEEEEEECCSSSCCEEEEEEE-----------T
T ss_pred --------------e-----cCCCeE-----------------EECCEEEEEEECCCCCCceEEEEEE-----------C
Confidence 0 111111 3577899999999999999999986 6
Q ss_pred CcEEEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCCCcccc-
Q 002976 728 GWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKIPVVD- 806 (861)
Q Consensus 728 G~ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~~~~~~- 806 (861)
|.+++|+|||.+++.+.+.++++|+||+||||.+.... ...+|+++++|+++++++++++++++||+++|.....++
T Consensus 171 ~~~i~~~GD~~~~~~~~~~~~~~d~li~e~~~~~~~~~--~~~~H~~~~~a~~~~~~~~~~~lil~H~~~~~~~~~~~~~ 248 (268)
T 1zkp_A 171 NDIVVYSADSSYIPEFIPFTKDADLFICECNMYAHQEA--AKAGHMNSTEVASIAKDANVKELLLTHLPHTGNPADLVTE 248 (268)
T ss_dssp TEEEEECCSCCCCTTHHHHHTTCSEEEEECCBCTTSCC--GGGTCCBHHHHHHHHHHTTCSEEEEESBCSSSCTHHHHHH
T ss_pred CeEEEEeCCCCCCHHHHHHHcCCCEEEEECCCCccccc--cCCCCCCHHHHHHHHHHcCCCEEEEECCCCCCChHHHHHH
Confidence 78999999999999999999999999999999865421 357799999999999999999999999999987543332
Q ss_pred --cccCCceEEeeeCcEEe
Q 002976 807 --ETHMHKTCIAFDLMSIN 823 (861)
Q Consensus 807 --~~~~~~v~~A~D~m~i~ 823 (861)
+....+|.+|+|||++.
T Consensus 249 ~~~~~~~~v~~a~dg~~~~ 267 (268)
T 1zkp_A 249 AKQIFSGHITLAHSGYVWN 267 (268)
T ss_dssp HHTTCCSEEEECCTTCEEE
T ss_pred HHHhCCCCEEEEeCCcccc
Confidence 23345799999999985
No 6
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.98 E-value=1.3e-32 Score=300.07 Aligned_cols=252 Identities=19% Similarity=0.175 Sum_probs=178.2
Q ss_pred ccEEEEEecCCC--CC-----------------C-CCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCc--cchhhhh
Q 002976 491 DLEIVLLGTGSS--QP-----------------S-KYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGV--EGADSAV 548 (861)
Q Consensus 491 ~~~i~fLGTGsa--~P-----------------s-~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~--~~~~~~l 548 (861)
+|+|+|||||++ +| . ..|+.||++|+.++..+||||||+++..|+.+ ++. ......+
T Consensus 2 ~M~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~~R~~ss~li~~~~~~~iLiD~G~~~~~~l~~-~~~l~~~~~~~~ 80 (321)
T 3jxp_A 2 MMYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHWILCNASPDIRAQLQA-FAPMQPARALRD 80 (321)
T ss_dssp CEEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSSSSEEEECCCTTHHHHHHT-CGGGCCCSSSSC
T ss_pred eEEEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCCcccceEEEEEeCCceEEEEeCCchHHHHHHh-cccccccccCCc
Confidence 589999999975 33 1 46899999999833335999999999888876 321 0000125
Q ss_pred ccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCC
Q 002976 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGN 628 (861)
Q Consensus 549 ~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (861)
.+|++|||||.|.||+.|++.|.. ..++.||+++.+.++++....... .. .. ...
T Consensus 81 ~~i~~i~lTH~H~DH~~gl~~l~~----------~~~~~vy~~~~~~~~l~~~~~~f~----~~--~~----~~~----- 135 (321)
T 3jxp_A 81 TGINAIVLLDSQIDHTTGLLSLRE----------GCPHQVWCTDMVHQDLTTGFPLFN----ML--SH----WNG----- 135 (321)
T ss_dssp CSEEEEECSCCCHHHHGGGGGGGG----------GCCEEEEECHHHHHHTTTTSCHHH----HH--TT----TTT-----
T ss_pred ccCCEEEECCCChhhhhhHHHHHh----------cCCCeEEECHHHHHHHHhhCcccc----cc--cc----ccC-----
Confidence 789999999999999999998831 247999999998877653110000 00 00 000
Q ss_pred CCCcccCCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHc---CCceeeEEeec--
Q 002976 629 GEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEA---GLETLISFPVV-- 703 (861)
Q Consensus 629 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l---g~~~i~~~pv~-- 703 (861)
.+.... + .++.++ .+ |.++|+++++.
T Consensus 136 ---------------------~i~~~~------i-----~~g~~~-----------------~i~~~~~~~V~~~~v~H~ 166 (321)
T 3jxp_A 136 ---------------------GLQWNR------I-----ELEGSF-----------------VIDACPNLKFTPFPLRSA 166 (321)
T ss_dssp ---------------------CEEEEE------C-----CSSSCE-----------------ECTTSTTEEEEEEEECCC
T ss_pred ---------------------ceeEEE------c-----CCCCeE-----------------EeccCCCeEEEEEEecCC
Confidence 000000 0 112221 24 67899999997
Q ss_pred ------cC-----CCCceEEEeccccccccCcccCCcEEEEeCCCCC-ChhHHhhcCCCcEEEEeccCCCChHHH-----
Q 002976 704 ------HC-----PQAFGFALKAAERINSVGKVIPGWKIVYSGDTRP-CPELVEASRGATVLIHEATFEDGMMEE----- 766 (861)
Q Consensus 704 ------H~-----~~a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~p-~~~l~~~~~~aDlLIhEaTf~d~~~~~----- 766 (861)
|. .+++||+|+.. .+|++|+|+|||++ ++.+++.++++|+||+||||.++....
T Consensus 167 ~~~~~~H~~~~~~~~~~Gy~i~~~---------~~g~~i~y~~Dt~~~~~~~~~~~~~~D~li~eat~~~d~e~~~~glk 237 (321)
T 3jxp_A 167 APPYSPHRFDPHPGDNLGLMVEDT---------RTGGKLFYAPGLGQVDEKLLAMMHGADCLLVDGTLWEDDEMQRRGVG 237 (321)
T ss_dssp CCTTCTTTTSCCTTSEEEEEEEET---------TTCCEEEEESSCCCCCHHHHHHHHHCSEEEEECCCSSTTHHHHHTSC
T ss_pred ccccccccccccCCCcEEEEEEec---------CCCcEEEEECCCCCCCHHHHHHhcCCCEEEEeCCCCCcHHHhhcccc
Confidence 76 37999999821 17899999999995 578999999999999999987643211
Q ss_pred ---HHhcCCCCHH---HHHHHHHHcCCCEEEEeeccCCCCCCcc----cccccCCceEEeeeCcEEecCC
Q 002976 767 ---AIAKNHSTTK---EAIDVGSSAGVYRIILTHFSQRYPKIPV----VDETHMHKTCIAFDLMSINLAD 826 (861)
Q Consensus 767 ---a~~~~HsT~~---eA~~va~~~~ak~lvLtHfS~Ry~~~~~----~~~~~~~~v~~A~D~m~i~l~~ 826 (861)
+..++|+|++ ||+++++++++|++||||+|+++|.... ..+....+|.+|+|||+|++=+
T Consensus 238 ~r~~~~~gH~s~~~~~eA~~~a~~~~~k~lvLtH~s~~np~l~~~~~e~~~~~~~~v~~A~DGm~i~~~~ 307 (321)
T 3jxp_A 238 TRTGREMGHLAQNGPGGTLEVLDGFPRQRKVLIHINNTNPILDENSPERAEVLRRGVEVAFDGMSIELLE 307 (321)
T ss_dssp SCCCC-CCCCCSSSTTCHHHHHTTCSSSEEEEESBCTTCGGGSTTCHHHHHHHHTTEEECCTTCEEEEC-
T ss_pred ccccCCCcccCCCCHHHHHHHHHhCCCCeEEEEEeCCCCcccccchHHHHHhhcCCcEEecCCcEEEehh
Confidence 1356899999 9999999999999999999999874321 2223457899999999999854
No 7
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.97 E-value=2.8e-31 Score=287.11 Aligned_cols=241 Identities=22% Similarity=0.204 Sum_probs=181.1
Q ss_pred CCccEEEEEecCCC--CC--------------CCCCCccEEEEEE--eCC--ceEEEeCCcchHHHHHHHhCccchhhhh
Q 002976 489 RDDLEIVLLGTGSS--QP--------------SKYRNVSSIYVNL--FSK--GSLLLDCGEGTLGQLKRRYGVEGADSAV 548 (861)
Q Consensus 489 ~~~~~i~fLGTGsa--~P--------------s~~Rn~Ss~ll~~--~~~--~~iLlDcGegt~~qL~r~~g~~~~~~~l 548 (861)
...|+|+|||||++ +| .+.|+.+|++|+. .++ ..+|||||+++..|+.+ .+ +
T Consensus 26 ~~~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~G~~~~~~l~~-~~-------~ 97 (293)
T 3md7_A 26 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRMQMID-SG-------V 97 (293)
T ss_dssp CSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTTHHHHHHH-HT-------C
T ss_pred CCcEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEECCccHHHHHHh-cC-------C
Confidence 46799999999985 43 4578899999985 233 69999999999999887 44 3
Q ss_pred ccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCC
Q 002976 549 RKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGN 628 (861)
Q Consensus 549 ~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (861)
.+|++|||||.|.||+.|++.|..... . +..++.||+|+.+.++++...... +. .|...
T Consensus 98 ~~id~IliTH~H~DHi~Gl~~l~~~~~--~---~~~~~~vy~~~~~~~~l~~~~~~~-----~~--------~~~~~--- 156 (293)
T 3md7_A 98 HMLDAAVYTHPHADHIHGIDDLRTYVV--D---NGRLMDVYANRLTRNRLYDTFGYC-----FE--------TPVGS--- 156 (293)
T ss_dssp CCCSEEECSCCCHHHHTTGGGGHHHHH--H---HTSCEEEEECHHHHHHHHHHCGGG-----TS--------CCTTC---
T ss_pred CcccEEEEcCCCchhhCCHHHHHHHhh--c---CCCceEEEECHHHHHHHHHhhhhh-----hc--------ccccc---
Confidence 789999999999999999998875432 1 235799999999988887642110 00 00000
Q ss_pred CCCcccCCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCC----ceeeEEeecc
Q 002976 629 GEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGL----ETLISFPVVH 704 (861)
Q Consensus 629 ~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~----~~i~~~pv~H 704 (861)
.+. ..+.... ..++..+ .+|. ++|+++++.|
T Consensus 157 ------------~~~-----~~~~~~~-----------l~~g~~~-----------------~~g~~~~~~~v~~~~~~H 191 (293)
T 3md7_A 157 ------------SYP-----PILSMHD-----------IAPETPF-----------------SIEGAGGAIRFEPFSQVH 191 (293)
T ss_dssp ------------CCC-----CCEEEEE-----------CCTTCCE-----------------EECCTTCCEEEEEEEEEE
T ss_pred ------------CCC-----CceEEEE-----------cCCCCcE-----------------EECCCCCcEEEEEEEecC
Confidence 000 0000000 0112221 3566 8999999999
Q ss_pred C-CCCceEEEeccccccccCcccCCcEEEEeCCCC-CChhHHhhcCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHH
Q 002976 705 C-PQAFGFALKAAERINSVGKVIPGWKIVYSGDTR-PCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVG 782 (861)
Q Consensus 705 ~-~~a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~-p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va 782 (861)
. .+++||+|+ +++|+|||. .++.+.+.++++|+||+||++... ...|++++||++++
T Consensus 192 ~~~~~~g~~i~---------------~~~y~gDt~~~~~~~~~~~~~~Dlli~e~~~~~~------~~~H~~~~~a~~~~ 250 (293)
T 3md7_A 192 GDIESLGFRIG---------------SVVYCTDVSAFPEQSLQYIKDADVLIIGALQYRP------HPSHFSLGEALEWI 250 (293)
T ss_dssp TTEEEEEEEET---------------TEEEECSCSBCCGGGHHHHTTCSEEEEECCCSSC------BTTBCCHHHHHHHH
T ss_pred CCCCEEEEEEe---------------EEEEECCCCCCCHHHHHHhcCCCEEEEeCccCCC------CCCCCCHHHHHHHH
Confidence 8 489999995 599999998 568899999999999999998763 57899999999999
Q ss_pred HHcCCCEEEEeeccCCCCCCcccccccCCceEEeeeCcEEecC
Q 002976 783 SSAGVYRIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINLA 825 (861)
Q Consensus 783 ~~~~ak~lvLtHfS~Ry~~~~~~~~~~~~~v~~A~D~m~i~l~ 825 (861)
+++++|+++|||||++|... .+.+....+|.+|+|||+|.|.
T Consensus 251 ~~~~~k~lvl~H~~~~~~~~-~~~~~~~~~v~~a~DG~~i~l~ 292 (293)
T 3md7_A 251 EKLSPKRAILTHMHVPLDYE-TVMRETPHHVEPGYDGLRFEVA 292 (293)
T ss_dssp HHHCCSEEEEESBCTTCCHH-HHHHHSCTTEEECCTTCEEEEC
T ss_pred HHcCCCEEEEECCCCCCCHH-HHHhhcCCCcEEeeCCcEEEec
Confidence 99999999999999998542 2334456799999999999873
No 8
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.97 E-value=1.4e-32 Score=291.75 Aligned_cols=229 Identities=22% Similarity=0.358 Sum_probs=171.3
Q ss_pred ccEEEEEecCCCC------------------CCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhcccc
Q 002976 491 DLEIVLLGTGSSQ------------------PSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLR 552 (861)
Q Consensus 491 ~~~i~fLGTGsa~------------------Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~ 552 (861)
.|+|+|||||++. |.+.|+.+|++|+. ++..+|||||.+.+.+ .+. ..+|+
T Consensus 2 ~~~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~r~~s~~li~~-~~~~iLiD~G~~~~~~---~~~-------~~~id 70 (258)
T 3g1p_A 2 SLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKF-NDAITLIDAGLHDLAD---RWS-------PGSFQ 70 (258)
T ss_dssp CEEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEE-TTEEEEECCCCTTHHH---HCC-------TTSSC
T ss_pred ceEEEEEEeCCCCCCccCCcCChhhhhhhhCccccccCceEEEEE-CCcEEEEECCchHHHh---hcC-------cccCC
Confidence 4899999999865 44679999999987 8889999999765432 232 36899
Q ss_pred EEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccc-eeeecccccccccccccCCCCC
Q 002976 553 CIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDM-QFLHCRYTREASWNDFEGNGEP 631 (861)
Q Consensus 553 ~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 631 (861)
+|||||.|.||+.|+..+.. ....++.||+|+....+ ..+ +..... .+.
T Consensus 71 ~IliTH~H~DHi~gl~~l~~--------~~~~~~~v~~~~~~~~~-~~~--~~~~~~~~~~------------------- 120 (258)
T 3g1p_A 71 QFLLTHYHMDHVQGLFPLRW--------GVGDPIPVYGPPDEQGC-DDL--FKHPGLLDFS------------------- 120 (258)
T ss_dssp EEECSCCCHHHHGGGTTTTT--------CSSSCEEEEECCCSSCS-TTT--TTSCTTEEEE-------------------
T ss_pred EEEEccCchhHhCCHHHHhc--------cCCCCeEEEeChhhhhH-HHH--hcCCCccccc-------------------
Confidence 99999999999999977621 12357999999876410 000 000000 000
Q ss_pred cccCCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceE
Q 002976 632 VKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGF 711 (861)
Q Consensus 632 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~ 711 (861)
..+ .++..+ .+|..+|+++++.|..+++||
T Consensus 121 ----------------------------~~~-----~~g~~~-----------------~~g~~~v~~~~~~H~~~~~g~ 150 (258)
T 3g1p_A 121 ----------------------------HTV-----EPFVVF-----------------DLQGLQVTPLPLNHSKLTFGY 150 (258)
T ss_dssp ----------------------------EEC-----CTTCCE-----------------EETTEEEEEEECCSSSCCEEE
T ss_pred ----------------------------ccc-----CCCCeE-----------------EECCEEEEEEECCCCCCceEE
Confidence 000 112221 367789999999999999999
Q ss_pred EEeccccccccCcccCCcEEEEeCCCCCChh-HHhhc--CCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHcCCC
Q 002976 712 ALKAAERINSVGKVIPGWKIVYSGDTRPCPE-LVEAS--RGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVY 788 (861)
Q Consensus 712 ~i~~~~~~~~~~~~~~G~ki~YsGDT~p~~~-l~~~~--~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~~~ak 788 (861)
+|+. +|++++|+|||.++++ +.+.+ +++|+||+||||.+++ ....+|++++||+++++++++|
T Consensus 151 ~i~~-----------~~~~i~~~GDt~~~~~~~~~~l~~~~~Dlli~e~t~~~~~---~~~~~H~~~~~a~~~~~~~~~k 216 (258)
T 3g1p_A 151 LLET-----------AHSRVAWLSDTAGLPEKTLKFLRNNQPQVMVMDCSHPPRA---DAPRNHCDLNTVLALNQVIRSP 216 (258)
T ss_dssp EEEC-----------SSCEEEEECSCSSCCHHHHHHHHHTCCSEEEEECCBSSCS---SCCSSSCBHHHHHHHHHHHCCS
T ss_pred EEEe-----------CCcEEEEECCCCCCCHHHHHHHHhCCCCEEEEeCCCCCcc---ccCCCCCCHHHHHHHHHHcCCC
Confidence 9986 6789999999998765 56665 7999999999998765 2367899999999999999999
Q ss_pred EEEEeeccCCCCCCcccccccCCceEEeeeCcEEecC
Q 002976 789 RIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINLA 825 (861)
Q Consensus 789 ~lvLtHfS~Ry~~~~~~~~~~~~~v~~A~D~m~i~l~ 825 (861)
+++|||||++|.. ..++....++|.+|+|||+|++.
T Consensus 217 ~lil~H~s~~~~~-~~~~~~~~~~v~~a~Dg~~~~~~ 252 (258)
T 3g1p_A 217 RVILTHISHQFDA-WLMENALPSGFEVGFDGMEIGVA 252 (258)
T ss_dssp CEEEESCCHHHHH-HHTTCCCCTTEEECCTTEEEC--
T ss_pred EEEEECccCccch-hhhhhhCCCCeEEccCCCEEeee
Confidence 9999999999863 22334456799999999999875
No 9
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.95 E-value=2.1e-28 Score=262.69 Aligned_cols=245 Identities=26% Similarity=0.356 Sum_probs=162.0
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARIL 571 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll 571 (861)
|+|..+..|+ +.+|++| ++..+|||||.++..++.+ .+.+|++|||||.|.||+.|++.|+
T Consensus 1 m~i~~~~~g~-------~~~~~~i---~~~~iLiD~G~~~~~~l~~---------~~~~i~~IliTH~H~DH~~gl~~l~ 61 (280)
T 2e7y_A 1 MNIIGFSKAL-------FSTWIYY---SPERILFDAGEGVSTTLGS---------KVYAFKYVFLTHGHVDHIAGLWGVV 61 (280)
T ss_dssp CCEEEEEETT-------TEEEEEE---GGGTEEEEECTTHHHHHGG---------GGGGCCEEECSCCCHHHHTTHHHHH
T ss_pred CEEEEEecCC-------ceEEEEE---CCcEEEEECCcchHHHhcc---------CccCCCEEEEeCCchhHHCCHHHHH
Confidence 4566776654 2467666 4678999999998754432 3578999999999999999999997
Q ss_pred HHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcccccccc
Q 002976 572 ALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKT 651 (861)
Q Consensus 572 ~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 651 (861)
..+.... +.+.+++.||+|.... +++........ +. .... + . .
T Consensus 62 ~~~~~~~-~~~~~~~~v~~~~~~~-~l~~~~~~~~~-~~----~~~~------~-----------------~-------~ 104 (280)
T 2e7y_A 62 NIRNNGM-GDREKPLDVFYPEGNR-AVEEYTEFIKR-AN----PDLR------F-----------------S-------F 104 (280)
T ss_dssp HHHHHHS-GGGCCCEEEEEETTCH-HHHHHHHHHHH-HC----GGGT------T-----------------T-------E
T ss_pred HHHHHhc-cCCCCCCEEEECccHH-HHHHHHHHHhh-cc----cCCC------C-----------------c-------e
Confidence 6542011 2123579999999887 77654321000 00 0000 0 0 0
Q ss_pred chhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcC-----CceeeEEeeccCCC--CceEEEecccc-c--cc
Q 002976 652 EANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAG-----LETLISFPVVHCPQ--AFGFALKAAER-I--NS 721 (861)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg-----~~~i~~~pv~H~~~--a~G~~i~~~~~-~--~~ 721 (861)
.... + .++..+ .+| .++|+++++.|+.+ ++||+|+...+ . +.
T Consensus 105 ~~~~------~-----~~g~~~-----------------~~g~~~~~~~~v~~~~~~H~~~~~~~g~~i~~~~~~l~~~~ 156 (280)
T 2e7y_A 105 NVHP------L-----KEGERV-----------------FLRNAGGFKRYVQPFRTKHVSSEVSFGYHIFEVRRKLKKEF 156 (280)
T ss_dssp EEEE------E-----CTTCCE-----------------ECCCSSCSCEEEEEEECCSCSSSCCEEEEEEEEEEEECGGG
T ss_pred EEEE------c-----CCCCEE-----------------EeCCcccCCEEEEEEEccCCCCCceEEEEEEEcccccCHhh
Confidence 0000 0 112211 245 57899999999998 99999974100 0 00
Q ss_pred -------------------cCcccCCcEEEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHH
Q 002976 722 -------------------VGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVG 782 (861)
Q Consensus 722 -------------------~~~~~~G~ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va 782 (861)
.+...+|++|+|+|||+++ +.++++++|+|||||||.+++.. ..++|+|++||++++
T Consensus 157 ~g~~~~~~~~l~~~~g~~~~~~~~~g~~i~ysgDt~~~--~~~~~~~~d~li~e~t~~~~~~~--~~~~H~t~~~a~~~~ 232 (280)
T 2e7y_A 157 QGLDSKEISRLVKEKGRDFVTEEYHKKVLTISGDSLAL--DPEEIRGTELLIHECTFLDARDR--RYKNHAAIDEVMESV 232 (280)
T ss_dssp TTCCHHHHHHHHHHHCTGGGEEEEEEEEEEECCSCSSC--CHHHHTTCSCEEEECCBC----------CCCBHHHHHHHH
T ss_pred cCCCHHHHHHHHhhcCCceecCCccCCEEEEECCCChH--HHHhhcCCCEEEEeCCcCChhhH--HhcCCCCHHHHHHHH
Confidence 0001246799999999999 67888999999999999886543 268999999999999
Q ss_pred HHcCCCEEEEeeccCCCCC-Cc-cccc---ccC-CceEEeeeCcEEec
Q 002976 783 SSAGVYRIILTHFSQRYPK-IP-VVDE---THM-HKTCIAFDLMSINL 824 (861)
Q Consensus 783 ~~~~ak~lvLtHfS~Ry~~-~~-~~~~---~~~-~~v~~A~D~m~i~l 824 (861)
+++++++++|||||+||+. .. .+++ .+. .+|.+|.|||++.|
T Consensus 233 ~~~~~~~lvl~H~~~~~~~~~~~~~~~~~~~~~~~~v~~a~~G~~~~~ 280 (280)
T 2e7y_A 233 KAAGVKKVILYHISTRYIRQLKSVIKKYREEMPDVEILYMDPRKVFEM 280 (280)
T ss_dssp HHHTCCEEEEESCCGGGHHHHHHHHHHHHHHCTTSEEEECCTTSCEEC
T ss_pred HHcCCCEEEEEeecCcCcchHHHHHHHHHHhCCCceEEEeCCCceeeC
Confidence 9999999999999999975 11 1221 222 37999999999875
No 10
>2cbn_A Ribonuclease Z; phosphodiesterase beta lactamase tRNAse Z, hydrolase, metal- binding, endonuclease, tRNA processing, zinc; 2.9A {Escherichia coli} SCOP: d.157.1.7
Probab=99.95 E-value=4.8e-27 Score=255.58 Aligned_cols=225 Identities=23% Similarity=0.373 Sum_probs=182.0
Q ss_pred eEEEEEeeCCCCC---CCCcEEEEEe----CCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHH
Q 002976 44 SYVQILGTGMDTQ---DTSPSVLLFF----DNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTL 116 (861)
Q Consensus 44 ~~l~~LGtgs~~~---~~~~slll~~----~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~ 116 (861)
|+|+|||||+..+ |.++|++|.. ++.++|||||+|+++++.+.++.+.++++|||||.|+||++||++++..+
T Consensus 2 m~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~~iliD~G~~~~~~l~~~~~~~~~i~~i~iTH~H~DH~~gl~~l~~~~ 81 (306)
T 2cbn_A 2 MNLIFLGTSAGVPTRTRNVTAILLNLQHPTQSGLWLFDCGEGTQHQLLHTAFNPGKLDKIFISHLHGDHLFGLPGLLCSR 81 (306)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEECCCSSCCCEEEECCCTTHHHHHHTSCCCTTTEEEEECSCCCHHHHTTHHHHHHHH
T ss_pred eEEEEEEcCCCCCCCCCCCCEEEEEeecCCCCcEEEEECCHHHHHHHHHhCCCHHHcCEEEEecCCchhhCChHHHHHHH
Confidence 8999999997532 5679999998 88999999999999999888888889999999999999999999999775
Q ss_pred hccCCCCCcEEEEcCccHHHHHHHHHhhcccC-ce-eeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcCCC
Q 002976 117 AGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHA-AM-VHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLKPS 194 (861)
Q Consensus 117 ~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~h~ 194 (861)
...++. .++.||||+++..+++......... .+ ....+ ..++..++.++++|+++++.|.
T Consensus 82 ~~~~~~-~~~~i~~~~~~~~~l~~~~~~~~~~~~~~~~~~~-----------------~~~g~~~~~~~~~v~~~~~~H~ 143 (306)
T 2cbn_A 82 SMSGII-QPLTIYGPQGIREFVETALRISGSWTDYPLEIVE-----------------IGAGEILDDGLRKVTAYPLEHP 143 (306)
T ss_dssp HHTTCC-SCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEEE-----------------CCSEEEEECSSEEEEEEECBSS
T ss_pred HhcCCC-CCeEEEcCccHHHHHHHHHHhhccCCCceEEEEE-----------------cCCCcEeecCCEEEEEEEccCC
Confidence 544432 3688999999998888765443111 00 01111 2345677888999999999997
Q ss_pred CCCCCCCCCCCCeeEEEEEeCCccCCCCHHHHHHcCCCCChhhhhhcCCCcEEeCCCceeecCCCccCCCCCCCEEEEE-
Q 002976 195 CSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPGPLVLLV- 273 (861)
Q Consensus 195 ~~~~~~~~~~~~s~gY~~~~~~~~gkf~~~ka~~lGv~~g~~~~~L~~G~~V~l~dg~~~v~p~~v~~~~~~g~~~~il- 273 (861)
. +++||+++.++++++|++++++++|+|+||++++|++|.+|++++|. .+.+++++....+|.+++|.
T Consensus 144 ~----------~~~gy~i~~~~~~~~~~~~~~~~~gv~~~~~~~~l~~g~~v~~~~G~-~~~~~~~~~~~~~g~~i~~sg 212 (306)
T 2cbn_A 144 L----------ECYGYRIEEHDAPGALNAQALKAAGVPPGPLFQELKAGKTITLEDGR-QINGADYLAAPVPGKALAIFG 212 (306)
T ss_dssp S----------CCEEEEEEECCCCCCBCHHHHHHTTCCSSHHHHHHHHTCCCEETTTE-ECCGGGTBCCCCCCCEEEECC
T ss_pred C----------CccEEEEEecCccCccCHHHHHHcCCCCchHHHHhcCCCeEEcCCCc-EEcHHHhcCCCCCCCEEEEeC
Confidence 4 79999999999999999999999999999999999999999999997 49999999988899999986
Q ss_pred cCCChhHHHHHhhhhccccccccCCCCcccCCceeEEEEeCCC
Q 002976 274 DCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPV 316 (861)
Q Consensus 274 D~p~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~H~~~~ 316 (861)
|+... +.+.+ ..+++|+++|+++-
T Consensus 213 Dt~~~---~~~~~----------------~~~~~D~li~E~t~ 236 (306)
T 2cbn_A 213 DTGPC---DAALD----------------LAKGVDVMVHEATL 236 (306)
T ss_dssp SCBSC---STHHH----------------HHTTCSEEEEECCB
T ss_pred CCCCH---HHHHH----------------HhcCCCEEEEECcC
Confidence 66222 22221 12468999999874
No 11
>1y44_A Ribonuclease Z; zinc-dependent metal hydrolase, hydrolase; HET: MES; 2.10A {Bacillus subtilis} SCOP: d.157.1.7 PDB: 2fk6_A*
Probab=99.94 E-value=1.3e-26 Score=253.86 Aligned_cols=225 Identities=21% Similarity=0.376 Sum_probs=145.1
Q ss_pred eEEEEEeeCCCCC---CCCcEEEEEe---CCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHh
Q 002976 44 SYVQILGTGMDTQ---DTSPSVLLFF---DNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLA 117 (861)
Q Consensus 44 ~~l~~LGtgs~~~---~~~~slll~~---~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~ 117 (861)
|+|+|||||+..+ ++++|++|.. ++..+|||||+|+++++.+.++.+.++++|||||.|+||++||+.++..+.
T Consensus 1 M~i~~LGtg~~~p~~~r~~~~~li~~~~~~~~~iLiD~G~~~~~~l~~~~~~~~~i~~I~iTH~H~DH~~gl~~l~~~~~ 80 (320)
T 1y44_A 1 MELLFLGTGAGIPAKARNVTSVALKLLEERRSVWLFDCGEATQHQMLHTTIKPRKIEKIFITHMHGDHVYGLPGLLGSRS 80 (320)
T ss_dssp CEEEEEECBSSSCCSSCCBCEEEEEETTTTSEEEEECCCTTHHHHHTTSSCCGGGEEEEECSBCCGGGTTTHHHHHHHHH
T ss_pred CEEEEEecCCCCCCccCCCCEEEEEEecCCCcEEEEECCHHHHHHHHHcCCCHHHcCEEEEeCCChhhhCCHHHHHHHHH
Confidence 6899999997532 5679999998 899999999999999888888888899999999999999999999998765
Q ss_pred ccCCCCCcEEEEcCccHHHHHHHHHhhcccC-ce-eeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcCCCC
Q 002976 118 GIGDEGLSVNVWGPSDLKYLVDAMKSFIPHA-AM-VHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLKPSC 195 (861)
Q Consensus 118 ~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~h~~ 195 (861)
..++. .++.||||+++..+++......... .+ .... ....+..++.++++|+++++.|..
T Consensus 81 ~~~~~-~~~~v~~~~~~~~~l~~~~~~~~~~~~~~~~~~-----------------~~~~g~~~~~~~~~v~~~p~~H~~ 142 (320)
T 1y44_A 81 FQGGE-DELTVYGPKGIKAFIETSLAVTKTHLTYPLAIQ-----------------EIEEGIVFEDDQFIVTAVSVIHGV 142 (320)
T ss_dssp HTTCC-SCEEEEESTTHHHHHHHHHHHTTCCCSSCEEEE-----------------ECCSEEEEECSSEEEEEEECBSSS
T ss_pred hcCCC-CCEEEEeCHHHHHHHHHHHHhhccCCCCceEEE-----------------EcCCCceEecCCEEEEEEEccCCC
Confidence 44432 3688999999988887765432110 00 0011 123455677888999999999974
Q ss_pred CCCCCCCCCCCeeEEEEEeCCccCCCCHHHHHHcCCCCChhhhhhcCCCcEEeCCCceeecCCCccCCCCCCCEEEEE-c
Q 002976 196 SDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQSGKSVKSDTLDIMVHPSDVLGPSLPGPLVLLV-D 274 (861)
Q Consensus 196 ~~~~~~~~~~~s~gY~~~~~~~~gkf~~~ka~~lGv~~g~~~~~L~~G~~V~l~dg~~~v~p~~v~~~~~~g~~~~il-D 274 (861)
+++||+++.++++|+|++++++++|+|+|+++.+|++|..|++.+|. ++.+++++.+..+|.+++|. |
T Consensus 143 ----------~~~gy~i~~~~~~~~~~~~~~~~~g~~~g~~~~~l~~g~~v~~~~G~-i~~~~~~~~~~~~g~~i~~sgD 211 (320)
T 1y44_A 143 ----------EAFGYRVQEKDVPGSLKADVLKEMNIPPGPVYQKIKKGETVTLEDGR-IINGNDFLEPPKKGRSVVFSGD 211 (320)
T ss_dssp ----------SBEEEEEEECCBCCCC---------------------------------------CCCCBCCCEEEECCS
T ss_pred ----------CcceEEEecCCCcCccCHHHHHHcCCCCchhHHHhhCCCeEEcCCCe-EEcHHHhcccCCCCCEEEEeCC
Confidence 89999999999999999999999999999999999999999999998 49999999998899999885 5
Q ss_pred CCChhHHHHHhhhhccccccccCCCCcccCCceeEEEEeCCC
Q 002976 275 CPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPV 316 (861)
Q Consensus 275 ~p~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~H~~~~ 316 (861)
+ .+.+.+.+ ..+++|+++|+++-
T Consensus 212 t---~~~~~~~~----------------~~~~~D~li~E~t~ 234 (320)
T 1y44_A 212 T---RVSDKLKE----------------LARDCDVMVHEATF 234 (320)
T ss_dssp C---BCCHHHHH----------------HTTTCSEEEEECCB
T ss_pred C---CCHHHHHH----------------HhCCCCEEEEeccC
Confidence 5 33333332 23568999999874
No 12
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.84 E-value=1.7e-20 Score=213.78 Aligned_cols=221 Identities=14% Similarity=0.114 Sum_probs=143.9
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchH----------HHHHHHhCc-cch--------------
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTL----------GQLKRRYGV-EGA-------------- 544 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~----------~qL~r~~g~-~~~-------------- 544 (861)
.+|+|+|||+++.++ .+|++|+. ++..+|||||.+.. .++.. .+. ...
T Consensus 5 ~~m~i~~lG~~~~~g-----~n~~li~~-~~~~iLiD~G~~~~~~~~~~~~~~~~~~~-~~~~~~~~~l~~~~~~~p~~~ 77 (429)
T 2az4_A 5 AKTTVTFHSGILTIG-----GTVIEVAY-KDAHIFFDFGTEFRPELDLPDDHIETLIN-NRLVPELKDLYDPRLGYEYHG 77 (429)
T ss_dssp CCEEEEEEECTTSSS-----CCEEEEEE-TTEEEEECCCCCCCTTCCCSCCCHHHHHH-TTSSCCCSSCBCGGGCCCCCS
T ss_pred CceEEEEeeCCCccC-----CeEEEEEE-CCeEEEEecCCCCCcccCCCcchhhhccC-CcccCCchhhhcccccccchh
Confidence 469999999998765 47899998 78899999998861 12222 111 000
Q ss_pred -hhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccc
Q 002976 545 -DSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWN 623 (861)
Q Consensus 545 -~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (861)
.....+|++|||||.|.||++|++.|+ +++.||+++.+..+++...... ..+. . .
T Consensus 78 ~~~~~~~i~~v~lTH~H~DHiggl~~l~------------~~~~iy~~~~~~~~~~~~~~~~---~~~~-----~----~ 133 (429)
T 2az4_A 78 AEDKDYQHTAVFLSHAHLDHSRMINYLD------------PAVPLYTLKETKMILNSLNRKG---DFLI-----P----S 133 (429)
T ss_dssp SCCCCCSEEEEECSCSCHHHHTTGGGBC------------TTSCEEEEHHHHHHHHHHTTTS---CSSC-----C----C
T ss_pred hhhccccCCEEEECCchHHHhCcHhHhc------------CCCCEEECHHHHHHHHHHHHhC---cccc-----c----c
Confidence 124578999999999999999998763 1467999999988886532100 0000 0 0
Q ss_pred cccCCCCCcccCCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeec
Q 002976 624 DFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVV 703 (861)
Q Consensus 624 ~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~ 703 (861)
.. +...+. ..+.. ..++..+ .+|.++|+++++.
T Consensus 134 ~~--------~~~~~~--------------------~~~~~--~~~g~~~-----------------~~g~~~v~~~~~~ 166 (429)
T 2az4_A 134 PF--------EEKNFT--------------------REMIG--LNKNDVI-----------------KVGEISVEIVPVD 166 (429)
T ss_dssp TT--------SCTTCC--------------------CCCEE--ECTTCEE-----------------EETTEEEEEEECC
T ss_pred cc--------cccccc--------------------ceEEE--eCCCCeE-----------------EECCEEEEEEECC
Confidence 00 000000 00000 0112211 3677899999999
Q ss_pred c-CCCCceEEEeccccccccCcccCCcEEEEeCCCCCC-------hhHHhhcCCCcEEEEeccCCCChHH--HHHhcCCC
Q 002976 704 H-CPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPC-------PELVEASRGATVLIHEATFEDGMME--EAIAKNHS 773 (861)
Q Consensus 704 H-~~~a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~p~-------~~l~~~~~~aDlLIhEaTf~d~~~~--~a~~~~Hs 773 (861)
| +.+++||+|+. ++.+++||||+... +.+.+.++++|+||+||||.+.... .....+|.
T Consensus 167 H~~~gs~~~~i~~-----------~~~~i~~tGD~~~~~~~~~~~~~~~~~~~~~d~Li~Est~~~~~~~~~~~~~~~~~ 235 (429)
T 2az4_A 167 HDAYGASALLIRT-----------PDHFITYTGDLRLHGHNREETLAFCEKAKHTELLMMEGVSISFPEREPDPAQIAVV 235 (429)
T ss_dssp CSSTTCEEEEEEE-----------TTEEEEECCSCCSSSTTHHHHHHHHHHHTTCSEEEEECCGGGSCCCCCCTTBCCCC
T ss_pred CCChhhEEEEEEe-----------CCcEEEECCCcccCCCchHHHHHHHHhccCCCEEEECCCCcCcccccccccCCCCC
Confidence 9 66799999986 66799999999742 3577888899999999998762100 00124588
Q ss_pred CHHHHHH----HHHHcCCCEEEEeeccCCCC
Q 002976 774 TTKEAID----VGSSAGVYRIILTHFSQRYP 800 (861)
Q Consensus 774 T~~eA~~----va~~~~ak~lvLtHfS~Ry~ 800 (861)
+..++.+ ++++ +.++++|+|++.++-
T Consensus 236 s~~~~~~~i~~~~~~-~~~rlil~h~~~~~~ 265 (429)
T 2az4_A 236 SEEDLVQHLVRLELE-NPNRQITFNGYPANV 265 (429)
T ss_dssp SHHHHHHHHHHHHHT-CSSSCEEEEECTTCH
T ss_pred CHHHHHHHHHHHHHh-CCCcEEEEEeccchH
Confidence 8877644 4433 367899999987653
No 13
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=99.82 E-value=8.2e-20 Score=204.11 Aligned_cols=231 Identities=16% Similarity=0.166 Sum_probs=160.1
Q ss_pred CCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEe--CCcchH----------HHHHHHhCccc-----------h-
Q 002976 489 RDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLD--CGEGTL----------GQLKRRYGVEG-----------A- 544 (861)
Q Consensus 489 ~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlD--cGegt~----------~qL~r~~g~~~-----------~- 544 (861)
.+.|+|++||+ +|++|+..++..|||| ||.|.. .|+.+..|... +
T Consensus 59 ~~~~~it~lG~-----------s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~ 127 (379)
T 3bv6_A 59 PNTFSMWWLGC-----------TGIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLD 127 (379)
T ss_dssp TTCEEEEEEET-----------TEEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSC
T ss_pred CCceEEEEecc-----------cEEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccC
Confidence 46799999994 6899998337899999 998864 46666555321 1
Q ss_pred hhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeeccccccccccc
Q 002976 545 DSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWND 624 (861)
Q Consensus 545 ~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (861)
...+.+|++|||||.|.||+ |++.+..... . ..+++.||+|..+.+++..+. +.. .++..
T Consensus 128 ~~~~~~iD~IliTH~H~DHi-g~~~l~~l~~----~-~~~~~~v~~~~~~~~~l~~~g-~~~--~~~~~----------- 187 (379)
T 3bv6_A 128 PFAIKEIDAVLASHDHADHI-DVNVAAAVLQ----N-CGEHVKFIGPQACVDLWLGWG-VPQ--ERCIV----------- 187 (379)
T ss_dssp GGGCCCCSEEECSBCSGGGC-CHHHHHHHHH----H-SCTTCEEEECHHHHHHHHHHT-CCG--GGEEE-----------
T ss_pred hHHCCCCCEEEECCCCcccC-ChHHHHHHHh----c-CCCCcEEEecHHHHHHHHHcC-CCh--hhEEE-----------
Confidence 12356899999999999999 6655533221 1 113689999999988887542 100 00000
Q ss_pred ccCCCCCcccCCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeecc
Q 002976 625 FEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVH 704 (861)
Q Consensus 625 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H 704 (861)
+ .++..+ .+|..+|+++++.|
T Consensus 188 ----------l--------------------------------~~g~~~-----------------~~g~~~v~~~~~~H 208 (379)
T 3bv6_A 188 ----------A--------------------------------KVGDVL-----------------EIGDVKIRVLDSFD 208 (379)
T ss_dssp ----------C--------------------------------CTTCEE-----------------EETTEEEEEEECCC
T ss_pred ----------e--------------------------------CCCCEE-----------------EECCEEEEEEeccc
Confidence 0 011111 35667899999988
Q ss_pred CC----------------------CCceEEEeccccccccCcccCCcEEEEeCCCCCChhHHhhcC--CCcEEEEeccCC
Q 002976 705 CP----------------------QAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELVEASR--GATVLIHEATFE 760 (861)
Q Consensus 705 ~~----------------------~a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~p~~~l~~~~~--~aDlLIhEaTf~ 760 (861)
.. .++||+|+. +|++|+|+|||.+++.+.++++ ++|++++.+...
T Consensus 209 ~~~~~~~p~~h~~~~G~~~~~~~~~~~g~~i~~-----------~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~ 277 (379)
T 3bv6_A 209 RTALVTLPKGVSSYDKAILDGMDERAVNYLIET-----------SGGSVYHSGDSHYSNYYAKHGNDYQIDVALLSYGEN 277 (379)
T ss_dssp HHHHTCCCTTSCSSCGGGGGCHHHHBEEEEEEE-----------TTEEEEECTTCCCCTTHHHHHHHSCCSEEEEEBCCC
T ss_pred ccccccccccccccccccccccCCceEEEEEEe-----------CCeEEEEeCCCCccHHHHHHhhcCCCCEEEecCCCC
Confidence 41 278999986 6789999999999988776654 789999976532
Q ss_pred CChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCC---Ccccccc---------cCCceEEeeeCcEEecC
Q 002976 761 DGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPK---IPVVDET---------HMHKTCIAFDLMSINLA 825 (861)
Q Consensus 761 d~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~---~~~~~~~---------~~~~v~~A~D~m~i~l~ 825 (861)
.. ....|+++++|++++++++++++|++|++..+.. ...+.+. ...++.++.+|+++.+.
T Consensus 278 ~~-----~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~ 349 (379)
T 3bv6_A 278 PR-----GVTDKMTSSDVLRAAESLDCQVVVPFHHDIWANFQNDPREIEVLWNMKKDRLQYQFAPFFWQVGGKYTYP 349 (379)
T ss_dssp CT-----TCCCSBCHHHHHHHHHHHTCSEEEEESTTSBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred cc-----cccccCCHHHHHHHHHHcCCCEEEEEeecccccccCCHHHHHHHHHhhhhhhcCCCceEEccCCcEEEec
Confidence 11 1367999999999999999999999999986421 1122111 12467789999999994
No 14
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=99.82 E-value=1.2e-19 Score=189.14 Aligned_cols=175 Identities=17% Similarity=0.239 Sum_probs=137.0
Q ss_pred CCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHH
Q 002976 489 RDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLA 568 (861)
Q Consensus 489 ~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~ 568 (861)
.+.|+|++|| .+|++|+. ++..+|||||.+... + ..+.++++|+|||.|.||+ |+.
T Consensus 27 ~~~~~it~lg-----------~s~~li~~-~~~~iliDpg~~~~~-----~------~~~~~id~VliTH~H~DH~-~~~ 82 (235)
T 3kl7_A 27 GKELTITFIK-----------HGSLMLTY-DNHSIQVDPVSEYAD-----Y------TTFPKADIILITHEHGDHL-DPK 82 (235)
T ss_dssp SCEEEEEEEE-----------TTEEEEEE-TTEEEEESCCTTTCC-----T------TSSCCCSEEEECCSSTTTC-CHH
T ss_pred CCCeEEEEEc-----------ceEEEEEE-CCEEEEECCCCCccc-----h------hhCCCCCEEEECCCccccC-CHH
Confidence 4679999999 47899987 788999999986521 1 1256899999999999999 877
Q ss_pred HHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCccccc
Q 002976 569 RILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLI 648 (861)
Q Consensus 569 ~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~ 648 (861)
.+.... ...+.||+|.....++... ..+
T Consensus 83 ~l~~~~--------~~~~~v~~~~~~~~~l~~~--------~~l------------------------------------ 110 (235)
T 3kl7_A 83 AIQAVE--------KSDTEIIANENSQKKLGKG--------KVL------------------------------------ 110 (235)
T ss_dssp HHHHHC--------CTTCEEEECHHHHHHHTCS--------EEC------------------------------------
T ss_pred HHHHhh--------cCCCEEEEcHHHHHHhcCc--------EEe------------------------------------
Confidence 664421 2468899999887766310 000
Q ss_pred cccchhhhcccccccccccCCCC-CCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCC----------CceEEEeccc
Q 002976 649 NKTEANLFAKGSCMQSVWKGPGI-PVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQ----------AFGFALKAAE 717 (861)
Q Consensus 649 ~~~~~~~~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~----------a~G~~i~~~~ 717 (861)
.++. .+ .+|.++|+++|+.|... +.||+|+.
T Consensus 111 -------------------~~g~~~~-----------------~~g~~~i~~~p~~H~~~~~~~~~~~~~~~g~~i~~-- 152 (235)
T 3kl7_A 111 -------------------KNGDTDT-----------------SISYMKIEAVPAYNTTPGRDKYHPRHRDNGYILTF-- 152 (235)
T ss_dssp -------------------CTTCEEC-----------------CSTTCEEEEEECCCCSTTGGGTSCTTTSEEEEEEE--
T ss_pred -------------------cCCCEEE-----------------EECCEEEEEEEeecCCCccccccCCCCceEEEEEe--
Confidence 0111 11 25668999999999752 58999986
Q ss_pred cccccCcccCCcEEEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccC
Q 002976 718 RINSVGKVIPGWKIVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQ 797 (861)
Q Consensus 718 ~~~~~~~~~~G~ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~ 797 (861)
+|.+++|+|||.+++.+.++ .++|++|+|+. ...|++++||++++++++++++|++|++.
T Consensus 153 ---------~g~~i~~~GDt~~~~~~~~l-~~~Dv~il~~~----------~~~h~~~~ea~~~~~~l~~k~vip~H~~~ 212 (235)
T 3kl7_A 153 ---------DGLRVYIAGDTEDIPEMKDL-KDIDIAFLPVN----------QPYTMTVSQAAKAARMFSPKILYPYHYGD 212 (235)
T ss_dssp ---------TTEEEEECCSCCSCGGGGGC-CSCSEEEEECC----------TTTSCCHHHHHHHHHHHCCSEEEEESCTT
T ss_pred ---------CCeEEEEECCCCchhhHHhh-cCCCEEEECCC----------CCcccCHHHHHHHHHHcCCCEEEEEcCCC
Confidence 78899999999999887654 68999999996 35699999999999999999999999998
No 15
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=99.82 E-value=1.4e-19 Score=201.03 Aligned_cols=231 Identities=16% Similarity=0.187 Sum_probs=153.8
Q ss_pred CCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEe--CCcchH----------HHHHHHhCccc-----------h-
Q 002976 489 RDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLD--CGEGTL----------GQLKRRYGVEG-----------A- 544 (861)
Q Consensus 489 ~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlD--cGegt~----------~qL~r~~g~~~-----------~- 544 (861)
.+.|+|++||+ +|++|+..++..|||| ||.|.. .|+.+..|... .
T Consensus 35 ~~~~~it~lG~-----------s~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~ 103 (360)
T 2wyl_A 35 PGTFAMWWLGC-----------TGIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLD 103 (360)
T ss_dssp TTCEEEEEEET-----------TEEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCC
T ss_pred CCcEEEEEecc-----------cEEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccC
Confidence 46799999995 6899987337899999 999863 35655333210 1
Q ss_pred hhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeeccccccccccc
Q 002976 545 DSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWND 624 (861)
Q Consensus 545 ~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (861)
...+.+|++|||||.|.||+ |++.+...... ..+++.||+|..+.+++..+. +.. .++...
T Consensus 104 ~~~l~~id~VliTH~H~DHi-g~~~l~~l~~~-----~~~~~~v~~p~~~~~~l~~~g-~~~--~~~~~l---------- 164 (360)
T 2wyl_A 104 PFAIRQIDAVLATHDHNDHI-DVNVAAAVMQN-----CADDVPFIGPKTCVDLWIGWG-VPK--ERCIVV---------- 164 (360)
T ss_dssp GGGCCCCSEEECSBSCTTTC-CHHHHHHHHHH-----SCTTCCEEECHHHHHHHHHHT-CCG--GGEEEC----------
T ss_pred HHHcCCCCEEEECCCchhcC-CHHHHHHHHhc-----CCCCCEEEEcHHHHHHHHHcC-CCh--heEEEc----------
Confidence 12357899999999999999 65554332211 113588999999988887542 100 000000
Q ss_pred ccCCCCCcccCCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeecc
Q 002976 625 FEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVH 704 (861)
Q Consensus 625 ~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H 704 (861)
.++..+ .+|..+|+++++.|
T Consensus 165 -------------------------------------------~~g~~~-----------------~~g~~~v~~~~~~H 184 (360)
T 2wyl_A 165 -------------------------------------------KPGDVV-----------------KVKDIEIHALDAFD 184 (360)
T ss_dssp -------------------------------------------CTTCEE-----------------EETTEEEEEEECCC
T ss_pred -------------------------------------------CCCCEE-----------------EECCEEEEEEeccC
Confidence 011111 24567888888887
Q ss_pred C---------------------CCCceEEEeccccccccCcccCCcEEEEeCCCCCChhHHhhcC--CCcEEEEeccCCC
Q 002976 705 C---------------------PQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELVEASR--GATVLIHEATFED 761 (861)
Q Consensus 705 ~---------------------~~a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~p~~~l~~~~~--~aDlLIhEaTf~d 761 (861)
. ..++||+|+. +|.+|+|+|||.+++.+.++++ ++|++++.+....
T Consensus 185 ~~~~~~~~~~~h~~g~~~~~~~~~~~g~~i~~-----------~g~~i~~sGDt~~~~~~~~i~~~~~~Dv~il~~g~~~ 253 (360)
T 2wyl_A 185 RTALITLPADQKAAGVLPDGMDDRAVNYLFKT-----------PGGSLYHSGDSHYSNYYAKHGNEHQIDVALGSYGENP 253 (360)
T ss_dssp C------------------CCTTTBEEEEEEE-----------TTEEEEECTTCCCCTTHHHHHHHSCCCEEEEEBCCCC
T ss_pred cccccccccccccccccccccCcccEEEEEEE-----------CCcEEEEeCCCCcCHHHHHHhhCCCCCEEEecCCCCc
Confidence 5 2478999986 6789999999999988776654 7899999776311
Q ss_pred ChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCC---Ccccccc---------cCCceEEeeeCcEEecC
Q 002976 762 GMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPK---IPVVDET---------HMHKTCIAFDLMSINLA 825 (861)
Q Consensus 762 ~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~---~~~~~~~---------~~~~v~~A~D~m~i~l~ 825 (861)
. ....||+++||++++++++++++|++|++..... ...+.+. ...++.++.+|+++.+.
T Consensus 254 ~-----~~~~h~~~~ea~~~~~~l~~k~vi~~H~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~Ge~~~l~ 324 (360)
T 2wyl_A 254 R-----GITDKMTSADMLRMGEALNAKVVIPFHHDIWSNFQADPQEIRVLWEMKKDRLKYGFKPFIWQVGGKFTWP 324 (360)
T ss_dssp T-----TCCCSBCHHHHHHHHHHHTCSEEEEESTTTBGGGCCCTHHHHHHHHHHTTTTTCCCEECBCCTTCEEEET
T ss_pred c-----cccCCCCHHHHHHHHHHhCCCEEEEEeeccccccCCCHHHHHHHHHhhhhhhcCCcceEEccCCcEEEec
Confidence 1 1367999999999999999999999999985321 1112111 13467789999999985
No 16
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=99.79 E-value=1.1e-18 Score=204.42 Aligned_cols=216 Identities=23% Similarity=0.280 Sum_probs=144.4
Q ss_pred CCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCc-------cchhhhhccccEEEEeccch
Q 002976 489 RDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGV-------EGADSAVRKLRCIWISHIHA 561 (861)
Q Consensus 489 ~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~-------~~~~~~l~~i~~IfISH~H~ 561 (861)
...|+|++||+++.+ +.+|++|+. ++..+|||||.+....- .+|. ........+|++|||||.|.
T Consensus 14 ~~~~~i~~LGg~~ei-----g~n~~li~~-~~~~iLID~G~~~~~~~--~~g~~~~~p~~~~l~~~~~~Id~I~iTH~H~ 85 (562)
T 3bk2_A 14 QDHVEIIPLGGMGEI-----GKNITVFRF-RDEIFVLDGGLAFPEEG--MPGVDLLIPRVDYLIEHRHKIKAWVLTHGHE 85 (562)
T ss_dssp CCCEEEEEEESBSBS-----SCCEEEEEE-TTEEEEECCCCBCCCTT--STTCCEEEECCHHHHHTGGGEEEEECCCCCH
T ss_pred CCcEEEEEecCCCCc-----CCCEEEEEE-CCeEEEEECCCCCCccc--cccccccccchhhhhcCcccCcEEEECCCCh
Confidence 457999999987754 357999998 78899999997532100 0111 01122357899999999999
Q ss_pred hhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCC
Q 002976 562 DHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSP 641 (861)
Q Consensus 562 DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p 641 (861)
||++|++.|+.... + +..++.||+++.+.++++....... +.. . .
T Consensus 86 DHiggl~~L~~~~~----~-~~~~~pIy~~~~t~~~l~~~l~~~~--~~~--~---~----------------------- 130 (562)
T 3bk2_A 86 DHIGGLPFLLPMIF----G-KESPVPIYGARLTLGLLRGKLEEFG--LRP--G---A----------------------- 130 (562)
T ss_dssp HHHTTHHHHHHHHH----C-SCCCSEEEEEHHHHHHHHHHHHHTT--CCS--T---T-----------------------
T ss_pred HHhCCHHHHHHhhc----c-ccCCceEEeCHHHHHHHHHHHHHcC--CCc--C---C-----------------------
Confidence 99999999987542 2 2346899999999888865532110 000 0 0
Q ss_pred CCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCC-ceeeEEeecc-CCCCceEEEeccccc
Q 002976 642 FSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGL-ETLISFPVVH-CPQAFGFALKAAERI 719 (861)
Q Consensus 642 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~-~~i~~~pv~H-~~~a~G~~i~~~~~~ 719 (861)
. . +..+ .++..+ .+|. ++|+++++.| +.+++||.|+.
T Consensus 131 ~---------~---------~~~v--~~g~~~-----------------~lg~~~~v~~~~~~H~~~gs~~~~i~~---- 169 (562)
T 3bk2_A 131 F---------N---------LKEI--SPDDRI-----------------QVGRYFTLDLFRMTHSIPDNSGVVIRT---- 169 (562)
T ss_dssp S---------E---------EEEE--CTTCEE-----------------EETTTEEEEEEECCCSSSSCEEEEEEE----
T ss_pred c---------e---------EEEE--CCCCEE-----------------EeCCCEEEEEEECCCCCcccEEEEEEE----
Confidence 0 0 0000 111111 3566 8999999999 46799999986
Q ss_pred cccCcccCCcEEEEeCCCCCC-----------hhHHhhc-CCCcEEEEeccCCCChHHHHHhcCCCC----HH-HHHHHH
Q 002976 720 NSVGKVIPGWKIVYSGDTRPC-----------PELVEAS-RGATVLIHEATFEDGMMEEAIAKNHST----TK-EAIDVG 782 (861)
Q Consensus 720 ~~~~~~~~G~ki~YsGDT~p~-----------~~l~~~~-~~aDlLIhEaTf~d~~~~~a~~~~HsT----~~-eA~~va 782 (861)
++.+++||||+... ..+.+.+ +++|+||+|+||.+. .+|.. +. ++.+++
T Consensus 170 -------~~~~il~tGD~~~~~~~~~g~~~d~~~l~~~~~~~~d~Li~EsT~~~~-------~g~~~~e~~v~~~l~~~~ 235 (562)
T 3bk2_A 170 -------PIGTIVHTGDFKLDPTPIDGKVSHLAKVAQAGAEGVLLLIADATNAER-------PGYTPSEMEIAKELDRVI 235 (562)
T ss_dssp -------TTEEEEECCSCCCCSSCTTSCCCCCHHHHHHHHHCCSEEEEECTTTTC-------CSCCCCHHHHHHHHHHHH
T ss_pred -------CCeEEEEcCCCCCCCCCCCCCcccHHHHHHhhccCCCEEEecccCCCC-------CCCCChHHHHHHHHHHHH
Confidence 56799999999631 2344455 689999999998752 23443 23 333566
Q ss_pred HHcCCCEEEEeeccCCCCCCc
Q 002976 783 SSAGVYRIILTHFSQRYPKIP 803 (861)
Q Consensus 783 ~~~~ak~lvLtHfS~Ry~~~~ 803 (861)
++++ ++++++||++++.+.+
T Consensus 236 ~~~~-grvii~~fas~~~r~q 255 (562)
T 3bk2_A 236 GRAP-GRVFVTTFASHIHRIQ 255 (562)
T ss_dssp HHCS-SCEEEECCTTCHHHHH
T ss_pred HhCC-CEEEEEEccccchHHH
Confidence 6565 8999999999886543
No 17
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=99.79 E-value=4.4e-19 Score=188.46 Aligned_cols=223 Identities=15% Similarity=0.056 Sum_probs=152.5
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHH---HH---HH-H-------hCccchhhhhccccEEE
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLG---QL---KR-R-------YGVEGADSAVRKLRCIW 555 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~---qL---~r-~-------~g~~~~~~~l~~i~~If 555 (861)
.+|+|++|| +||++|+. ++..||+|++..-.+ .+ .+ . .+. ...+.+.++++|+
T Consensus 3 ~~m~it~lG-----------ha~~li~~-~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~id~il 69 (264)
T 3rpc_A 3 AMTQYTHIR-----------NATGKLTI-KNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPL-SMDDLLSNVTAVV 69 (264)
T ss_dssp CCCEEEEEE-----------TTEEEEEE-TTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSS-CHHHHHTTCCEEE
T ss_pred ceEEEEEEe-----------CcEEEEEE-CCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCC-CHHHccccCCEEE
Confidence 369999999 58899998 888999999532210 00 00 0 001 1112234899999
Q ss_pred EeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeC-chHHHHHHHHHhcccccceeeecccccccccccccCCCCCccc
Q 002976 556 ISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGP-GPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKN 634 (861)
Q Consensus 556 ISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 634 (861)
|||.|.||+.++..+.. ...+.||++ .....+++.... .. ...
T Consensus 70 iTH~H~DH~~~~~~~~~----------~~~~~v~~~~~~~~~~l~~~g~-~~----~~~--------------------- 113 (264)
T 3rpc_A 70 VTHTHLDHWDDTAINSI----------PKSLPIFVQNTADKELITSQGF-ID----VRI--------------------- 113 (264)
T ss_dssp CSCCCGGGSCHHHHHHS----------CTTSCEEESSHHHHHHHHHTTC-SC----EEE---------------------
T ss_pred ECCCchhhCCCHHHHhh----------ccCCeEEEeCHHHHHHHHhcCC-Ce----eEE---------------------
Confidence 99999999998865521 134678888 888877765321 00 000
Q ss_pred CCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCC-------
Q 002976 635 LSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQ------- 707 (861)
Q Consensus 635 ~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~------- 707 (861)
+ +.. .++|.++|+++|+.|...
T Consensus 114 ---------------------------~-------~~~-----------------~~~~~~~i~~~pa~H~~~~~~~~p~ 142 (264)
T 3rpc_A 114 ---------------------------I-------FES-----------------LEFNGITLRKTGGSHGTVEMYANPV 142 (264)
T ss_dssp ---------------------------C-------SSE-----------------EEETTEEEEEECCCSSCHHHHTSTT
T ss_pred ---------------------------e-------ccc-----------------EEECCEEEEEeccccCCcccccccc
Confidence 0 000 135678999999999863
Q ss_pred -------CceEEEeccccccccCcccCCcEEEEeCCCCCChhHHhhcC--CCcEEEEeccCCCChHHHHHhcCCCCHHHH
Q 002976 708 -------AFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELVEASR--GATVLIHEATFEDGMMEEAIAKNHSTTKEA 778 (861)
Q Consensus 708 -------a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~p~~~l~~~~~--~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA 778 (861)
++||+|+.. +|++|+|+|||.+++.+.++++ ++|++|++++...... .....|++++||
T Consensus 143 ~~~~~~~~~g~~i~~~----------~~~~i~~~GDt~~~~~~~~~~~~~~~Dv~il~~g~~~~~~--~~~~~hm~~~ea 210 (264)
T 3rpc_A 143 LAPLAGDAMGVIFEAA----------DEPTVYLVGDTVWTSDVEKALLRFDPNVIIMNTGYAQILG--FEDSIIMGTKDI 210 (264)
T ss_dssp HHHHHCCCCEEEEECT----------TSCCEEECCSCCSCHHHHHHHHHHCCSEEEEECSCBCBTT--CSSCSSCCHHHH
T ss_pred ccccccccEEEEEEeC----------CccEEEEECCcCchHHHHHHHHHhCCCEEEEecCcccccc--ccCCcccCHHHH
Confidence 689999861 3789999999999999877654 6999999999543211 114679999999
Q ss_pred HHHHHHcCCCEEEEeeccCCCC--CC-ccccc----c-cCCceEEeeeCcEEec
Q 002976 779 IDVGSSAGVYRIILTHFSQRYP--KI-PVVDE----T-HMHKTCIAFDLMSINL 824 (861)
Q Consensus 779 ~~va~~~~ak~lvLtHfS~Ry~--~~-~~~~~----~-~~~~v~~A~D~m~i~l 824 (861)
+++++.+++|++|++|++.-.. .. ..+.+ . ...++.+..+|.+++|
T Consensus 211 ~~~~~~l~~~~vi~~H~~~~~~~~~~~~~l~~~~~~~g~~~~~~~~~~Ge~~~l 264 (264)
T 3rpc_A 211 GRMVVRKPEAKIIAVHMDTVNHTATSRKDVRKFIKGNNIESHVAVPEDGETITL 264 (264)
T ss_dssp HHHHHHCTTSEEEEESCSSSTTBCSCHHHHHHHHHHTTCTTTEECCCTTCEEEC
T ss_pred HHHHHhCCcCeEEEEccccccccccCHHHHHHHHHHcCCCCcEEecCCCCEEeC
Confidence 9999999999999999985221 11 11211 1 1247889999998875
No 18
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=99.77 E-value=3.5e-19 Score=202.16 Aligned_cols=189 Identities=19% Similarity=0.174 Sum_probs=123.7
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARIL 571 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll 571 (861)
|+|+|||+++.++ .||++|+. ++..||||||...-....+.+ ......+.+|++|||||.|.||++|++.|+
T Consensus 1 M~i~~LG~~~~vg-----~s~~li~~-~~~~iLID~G~~~~~~~~~~~--~~~~~~~~~Id~VllTH~H~DH~gglp~l~ 72 (431)
T 3iek_A 1 MRIVPFGAAREVT-----GSAHLLLA-GGRRVLLDCGMFQGKEEARNH--APFGFDPKEVDAVLLTHAHLDHVGRLPKLF 72 (431)
T ss_dssp CEEEECSCSSSSS-----CCCEEEEE-TTEEEEECCCCCCGGGGGGGG--SCCSSCGGGCCEEECSCCCHHHHTTHHHHH
T ss_pred CEEEEeCCCCCCC-----CcEEEEEE-CCeEEEEeCCCCcchhhccch--hhcCCCcccCCEEEECCCChHHhccHHHHH
Confidence 7899999999875 48999998 788999999983211111111 111223578999999999999999999986
Q ss_pred HHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcccccccc
Q 002976 572 ALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKT 651 (861)
Q Consensus 572 ~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~ 651 (861)
.. + ....||+++.+.+++.....-.. .+. . .+.+ ..+. .
T Consensus 73 ~~------~---~~~~Iy~t~~t~~l~~~~l~d~~-~~~-----~-----~~~y-----------------~~~~----~ 111 (431)
T 3iek_A 73 RE------G---YRGPVYATRATVLLMEIVLEDAL-KVM-----D-----EPFF-----------------GPED----V 111 (431)
T ss_dssp HT------T---CCSCEEECHHHHHHHHHHHHHHH-HHC-----S-----SCSS-----------------CHHH----H
T ss_pred Hc------C---CCCeEEEcHHHHHHHHHHHHHHH-hhc-----c-----cCCC-----------------CHHH----H
Confidence 52 1 23569999998887765421100 000 0 0000 0000 0
Q ss_pred chhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccccccCcccCCcEE
Q 002976 652 EANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKI 731 (861)
Q Consensus 652 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~~~G~ki 731 (861)
. ..+. .+..+ ..+..+ .++.++++++++.|+.++.+|.++. ++.++
T Consensus 112 ~-~~~~---~~~~l--~~~~~~-----------------~l~g~~v~~~~agH~~Gs~~~~i~~-----------~~~~i 157 (431)
T 3iek_A 112 E-EALG---HLRPL--EYGEWL-----------------RLGALSLAFGQAGHLPGSAFVVAQG-----------EGRTL 157 (431)
T ss_dssp H-HHHH---TEEEC--CTTCCE-----------------EETTEEEEEEECCSSTTCEEEEEEE-----------TTEEE
T ss_pred H-HHHh---ccEEc--CCCCeE-----------------EeCCEEEEEEeCCCCcCceEEEEEE-----------CCEEE
Confidence 0 0000 00000 112211 3577899999999999999999986 67899
Q ss_pred EEeCCCCCChhHH----hhcCCCcEEEEeccCCCCh
Q 002976 732 VYSGDTRPCPELV----EASRGATVLIHEATFEDGM 763 (861)
Q Consensus 732 ~YsGDT~p~~~l~----~~~~~aDlLIhEaTf~d~~ 763 (861)
+||||+++++... +...++|+||+||||.+..
T Consensus 158 lfsGD~~~~~~~~l~~~~~~~~~D~LI~EsTy~~~~ 193 (431)
T 3iek_A 158 VYSGDLGNREKDVLPDPSLPPLADLVLAEGTYGDRP 193 (431)
T ss_dssp EECCCCCCTTSSSSCCCCBCCCCSEEEEECTTTTCC
T ss_pred EEeCCCCCCCCcccCCccccCCccEEEEEcccCCcC
Confidence 9999999865532 4567999999999999854
No 19
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=99.73 E-value=8.3e-18 Score=173.22 Aligned_cols=88 Identities=22% Similarity=0.239 Sum_probs=74.4
Q ss_pred cCCceeeEEeeccCC-------CCceEEEeccccccccCcccCCcEEEEeCCCCCChh--HHhhcCCCcEEEEeccCCCC
Q 002976 692 AGLETLISFPVVHCP-------QAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPE--LVEASRGATVLIHEATFEDG 762 (861)
Q Consensus 692 lg~~~i~~~pv~H~~-------~a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~p~~~--l~~~~~~aDlLIhEaTf~d~ 762 (861)
+|.++|+++|+.|.. .++||+|+. +|.+|+|+|||.+++. ..+..+++|++|+|+.
T Consensus 83 ~~~~~I~~~~~~H~~~~g~~~g~~~g~~i~~-----------~g~~i~~~GDt~~~~~~~~~~~~~~~Dvlil~~g---- 147 (220)
T 1vjn_A 83 VNGVKIKGVETFHDPSHGRERGKNIVFVFEG-----------EGIKVCHLGDLGHVLTPAQVEEIGEIDVLLVPVG---- 147 (220)
T ss_dssp ETTEEEEEEEEEEC-------CEEEEEEEEE-----------TTEEEEECTTCCSCCCHHHHHHHCCCSEEEEECC----
T ss_pred ECCEEEEEEeeecCCCCCccCCCcEEEEEEE-----------CCeEEEEeCCCCCcchHHHHHhhCCCCEEEEcCC----
Confidence 345688999999986 269999986 7889999999998864 4555679999999995
Q ss_pred hHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCC
Q 002976 763 MMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYP 800 (861)
Q Consensus 763 ~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~ 800 (861)
...|++++||+++++++++++++++|++..+-
T Consensus 148 ------~~~h~~~~~a~~~~~~~~~k~vi~~H~~~~~~ 179 (220)
T 1vjn_A 148 ------GTYTIGPKEAKEVADLLNAKVIIPMHYKTKYL 179 (220)
T ss_dssp ------SSSSCCHHHHHHHHHHTTCSEEEEESCCCSSC
T ss_pred ------CcCcCCHHHHHHHHHhcCCCEEEEEecccccc
Confidence 34699999999999999999999999999864
No 20
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=99.71 E-value=8.8e-17 Score=184.48 Aligned_cols=196 Identities=18% Similarity=0.142 Sum_probs=119.3
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHH
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLAR 569 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ 569 (861)
+.|+|+|||+|+.++ ++|++|+. ++..||||||.+....-.+.+.. .....+.+|++|||||.|.||++|++.
T Consensus 10 ~~m~i~~LG~~~~vg-----~s~~li~~-~~~~iLID~G~~~~~~~~~~~~~-l~~~~~~~Id~VllTH~H~DH~ggl~~ 82 (459)
T 2i7t_A 10 DQLLIRPLGAGQEVG-----RSCIILEF-KGRKIMLDCGIHPGLEGMDALPY-IDLIDPAEIDLLLISHFHLDHCGALPW 82 (459)
T ss_dssp EEEEEEEEESSSSSS-----SCEEEEEE-TTEEEEECCCCCTTSCGGGGSCC-GGGSCGGGCCEEECCCSSHHHHTTHHH
T ss_pred CeEEEEEEecCCCCC-----CCEEEEEE-CCeEEEEeCCCCcCcccccccCc-ccccCcccCcEEEECCCChhhhhhhHH
Confidence 469999999999763 68999998 78899999998631000000110 001235789999999999999999998
Q ss_pred HHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcccccc
Q 002976 570 ILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLIN 649 (861)
Q Consensus 570 ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~ 649 (861)
++... + -+..||++..+...+..+..-. . .... .. .+. ..+...
T Consensus 83 l~~~~-----~---~~~~iy~t~~t~~l~~~~l~d~-~--~~~~---~~--~~~----------------~~~~~~---- 126 (459)
T 2i7t_A 83 FLQKT-----S---FKGRTFMTHATKAIYRWLLSDY-V--KVSN---IS--ADD----------------MLYTET---- 126 (459)
T ss_dssp HHHHS-----S---CCSEEEEEHHHHHHHHHHHHHH-C--C------------------------------CCCHH----
T ss_pred HHHhc-----C---CCCCEEechHHHHHHHHHHHHH-H--HHhc---cc--ccc----------------cccCHH----
Confidence 87542 1 2357899887766554432100 0 0000 00 000 000000
Q ss_pred ccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccccccCcccCCc
Q 002976 650 KTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGW 729 (861)
Q Consensus 650 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~~~G~ 729 (861)
.+.. .. ..+..+ ..+..+ .++.++++++++.|+.++++|.++. +|.
T Consensus 127 ~~~~-~~---~~~~~~--~~~~~~-----------------~~~gi~v~~~~~GH~~Gs~~~~i~~-----------~~~ 172 (459)
T 2i7t_A 127 DLEE-SM---DKIETI--NFHEVK-----------------EVAGIKFWCYHAGHVLGAAMFMIEI-----------AGV 172 (459)
T ss_dssp HHHH-HG---GGEEEE--CTTCCE-----------------EETTEEEEEEECCSSTTCEEEEEEE-----------TTE
T ss_pred HHHH-HH---hccEEe--CCCCEE-----------------EECCEEEEEEeCCCccCcEEEEEEE-----------CCc
Confidence 0000 00 000000 111111 3567889999999999999999986 678
Q ss_pred EEEEeCCCCCChhHHhhc-----CCCcEEEEeccCCCC
Q 002976 730 KIVYSGDTRPCPELVEAS-----RGATVLIHEATFEDG 762 (861)
Q Consensus 730 ki~YsGDT~p~~~l~~~~-----~~aDlLIhEaTf~d~ 762 (861)
+|+||||+.+++...... .++|+||+||||.+.
T Consensus 173 ~il~sGD~~~~~~~~~~~~~~~~~~~D~Li~Esty~~~ 210 (459)
T 2i7t_A 173 KLLYTGDFSRQEDRHLMAAEIPNIKPDILIIESTYGTH 210 (459)
T ss_dssp EEEECCSCCCC-----CCCCCCSSCCSEEEEECTTTTC
T ss_pred EEEEeCCCCCCCCcccCCCCcCCCCCeEEEECCCCCCC
Confidence 999999999987654322 489999999999874
No 21
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=99.70 E-value=5.1e-17 Score=193.49 Aligned_cols=251 Identities=15% Similarity=0.114 Sum_probs=146.4
Q ss_pred CCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHH-H-HHHhCccc-hhh--hh--ccccEEEEeccch
Q 002976 489 RDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQ-L-KRRYGVEG-ADS--AV--RKLRCIWISHIHA 561 (861)
Q Consensus 489 ~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~q-L-~r~~g~~~-~~~--~l--~~i~~IfISH~H~ 561 (861)
.+.|+|+|||+|++++ .+|++|+. ++..||||||.+.... + ...+..-. ... .+ .+|++|||||.|.
T Consensus 186 ~~~m~i~~LG~~~~vg-----~s~~LI~~-~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~ 259 (651)
T 3af5_A 186 SRWIRITGLGGFREVG-----RSALLVQT-DESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHL 259 (651)
T ss_dssp CSCEEEEEEECSSSSS-----CCEEEEEE-SSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSH
T ss_pred CCceEEEEEecCCCCC-----CcEEEEEE-CCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCCh
Confidence 3579999999999764 68999998 7889999999885210 0 11121100 001 35 7899999999999
Q ss_pred hhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHh-cccccceeeecccccccccccccCCCCCcccCCCCCC
Q 002976 562 DHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYER-LEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGS 640 (861)
Q Consensus 562 DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 640 (861)
||++|++.|+.. +. ....||++..+..++..... .... .... .+ ..
T Consensus 260 DHiGglp~L~~~------~~--~~~pIy~t~~t~~ll~~~l~d~~~~-------~~~~--~~----------------~~ 306 (651)
T 3af5_A 260 DHCGMLPYLFRY------NL--FDGPIYTTPPTRDLMVLLQKDFIEI-------QQSN--GQ----------------DP 306 (651)
T ss_dssp HHHTTHHHHHHT------TC--CCSCEEECHHHHHHHHHHHHHHHHH-------HHHT--TC----------------CC
T ss_pred HhhcCHHHHHhc------CC--CCceEEEcHHHHHHHHHHHHHHHHH-------hhhc--cc----------------CC
Confidence 999999998642 10 13569999988776653321 0000 0000 00 00
Q ss_pred CCCccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHc-CCceeeEEeeccCCCCceEEEeccccc
Q 002976 641 PFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEA-GLETLISFPVVHCPQAFGFALKAAERI 719 (861)
Q Consensus 641 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l-g~~~i~~~pv~H~~~a~G~~i~~~~~~ 719 (861)
++.... ... ... .+.. ...+..+ .+ |.++++++++.|+.++++|.++.
T Consensus 307 ~~~~~~----~~~-~~~---~~~~--l~~g~~~-----------------~l~ggi~v~~~~~gH~~Gs~~~~i~~---- 355 (651)
T 3af5_A 307 LYRPRD----IKE-VIK---HTIT--LDYGEVR-----------------DISPDIRLTLHNAGHILGSAIVHLHI---- 355 (651)
T ss_dssp SSCHHH----HHH-HHH---TEEE--CCTTCCE-----------------EEETTEEEEEEECSSSTTCEEEEEEE----
T ss_pred CCCHHH----HHH-hhh---cEEE--eCCCCEE-----------------EecCCEEEEEecCCCCcCcEEEEEEE----
Confidence 000000 000 000 0000 0112211 35 67889999999999999999986
Q ss_pred cccCcccCCc--EEEEeCCCCCChh-HHh----hcCCCcEEEEeccCCCChHHHHHhcCCCCH----HHHHHHHHHc--C
Q 002976 720 NSVGKVIPGW--KIVYSGDTRPCPE-LVE----ASRGATVLIHEATFEDGMMEEAIAKNHSTT----KEAIDVGSSA--G 786 (861)
Q Consensus 720 ~~~~~~~~G~--ki~YsGDT~p~~~-l~~----~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~----~eA~~va~~~--~ 786 (861)
++. +++||||+++++. +.. ...++|+||+||||.+.. ..|.+- .+..++.++. .
T Consensus 356 -------~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLI~EsT~~~~~------~~h~s~~~~~~~l~~~i~~~l~~ 422 (651)
T 3af5_A 356 -------GNGLHNIAITGDFKFIPTRLLEPANAKFPRLETLVMESTYGGAN------DIQMPREEAEKRLIEVIHNTIKR 422 (651)
T ss_dssp -------TTTTTCEEECCSCCCSCCSSCCCCCCBCSSCSEEEEECTTCSTT------CCCCCHHHHHHHHHHHHHHHHHT
T ss_pred -------CCCceEEEEeCCCCCCcccccccccccCCCCCEEEECCCCCCCC------CCCCCHHHHHHHHHHHHHHHHhC
Confidence 445 8999999998764 332 246899999999998742 123332 2233333332 3
Q ss_pred CCEEEEeeccCCCCCCccc----cccc---CCceEEeeeCcEEec
Q 002976 787 VYRIILTHFSQRYPKIPVV----DETH---MHKTCIAFDLMSINL 824 (861)
Q Consensus 787 ak~lvLtHfS~Ry~~~~~~----~~~~---~~~v~~A~D~m~i~l 824 (861)
-+++++..|+ ..+.+.+ .+.. .-.+-++.|+|....
T Consensus 423 ~g~vlIp~fa--vgR~qell~~l~~~~~~~~l~~~I~~dg~a~~~ 465 (651)
T 3af5_A 423 GGKVLIPAMA--VGRAQEVMMVLEEYARIGGIEVPIYLDGMIWEA 465 (651)
T ss_dssp TCEEEEECCT--TTHHHHHHHHHHHHHTTTCCCSCEEEESSHHHH
T ss_pred CCEEEEeccC--ccHHHHHHHHHHHhhhhcCCCCcEEEechHHHH
Confidence 4678888887 2222221 1111 111567788887653
No 22
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=99.68 E-value=5.2e-17 Score=193.06 Aligned_cols=252 Identities=19% Similarity=0.187 Sum_probs=148.2
Q ss_pred CCccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHH-HHHHhC-ccchhhhhccccEEEEeccchhhhcc
Q 002976 489 RDDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQ-LKRRYG-VEGADSAVRKLRCIWISHIHADHHAG 566 (861)
Q Consensus 489 ~~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~q-L~r~~g-~~~~~~~l~~i~~IfISH~H~DH~~G 566 (861)
...|+|++||+|+.++ .+|++|+. ++..||||||.+.... -...+. .......+.+|++|||||.|.||++|
T Consensus 177 ~~~m~i~~LG~~~evg-----~s~~lI~~-~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGg 250 (636)
T 2ycb_A 177 NDWARLTAMGGFREVG-----RSCLYLQT-PNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGF 250 (636)
T ss_dssp CCCCEEEEEESSSSSS-----CCEEEEEC-SSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTT
T ss_pred CCeEEEEEEecCCCCC-----CCEEEEEE-CCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcC
Confidence 3579999999998764 68999987 7789999999874210 001121 10011246789999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCccc
Q 002976 567 LARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEG 646 (861)
Q Consensus 567 L~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 646 (861)
++.|+.. + ....||++..+..++.....-. ... .... .+. .++...
T Consensus 251 lp~L~~~------~---~~~~Iy~t~~t~~l~~~~l~d~---~~~---~~~~--~~~----------------~~~~~~- 296 (636)
T 2ycb_A 251 LPYLYHY------G---YDGPVYCTAPTRDLMTLLQLDH---IDI---AHRE--DEP----------------LPFNVK- 296 (636)
T ss_dssp HHHHHHT------T---CCSCEEECHHHHHHHHHHHHHH---HHH---HHHH--TCC----------------CSCCHH-
T ss_pred HHHHHhc------C---CCCeEEEcchHHHHHHHHHHHH---HHh---hhhc--CCC----------------CCCCHH-
Confidence 9998652 1 2356999998877665432100 000 0000 000 000000
Q ss_pred cccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHc-CCceeeEEeeccCCCCceEEEeccccccccCcc
Q 002976 647 LINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEA-GLETLISFPVVHCPQAFGFALKAAERINSVGKV 725 (861)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l-g~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~ 725 (861)
.+.. ... .+.. ...+..+ .+ |.++++++++.|+.++++|.++.
T Consensus 297 ---~i~~-~~~---~~~~--l~~g~~~-----------------~l~ggi~v~~~~~gH~~Gs~~~~i~~---------- 340 (636)
T 2ycb_A 297 ---HVKK-SVK---HTIT--LDYGEVT-----------------DIAPDIRLTLHNAGHILGSAMAHLHI---------- 340 (636)
T ss_dssp ---HHHH-HHH---TEEE--CCTTCCE-----------------EEETTEEEEEEECCSSTTCEEEEEEE----------
T ss_pred ---HHHH-HHh---ceEE--eCCCCEE-----------------EecCCeEEEEeCCCCCCCcEEEEEEE----------
Confidence 0000 000 0000 0112211 35 67889999999999999999986
Q ss_pred cCCc--EEEEeCCCCCChh-HHh----hcCCCcEEEEeccCCCChHHHHHhcCCCC----HHHHHHHHHH---cCCCEEE
Q 002976 726 IPGW--KIVYSGDTRPCPE-LVE----ASRGATVLIHEATFEDGMMEEAIAKNHST----TKEAIDVGSS---AGVYRII 791 (861)
Q Consensus 726 ~~G~--ki~YsGDT~p~~~-l~~----~~~~aDlLIhEaTf~d~~~~~a~~~~HsT----~~eA~~va~~---~~ak~lv 791 (861)
++. +++||||++++.. +.+ ...++|+||+||||.+.. ..|.+ .++..++.++ .+.+.++
T Consensus 341 -~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~D~LI~EsT~~~~~------~~h~s~~~~~~~l~~~i~~~~~~~g~vlI 413 (636)
T 2ycb_A 341 -GDGQHNMVYTGDFKYEQSRLLEAAANRFPRIETLVMESTYGGHE------DVQPSRNRAEKELVKTIYSTLRRGGKILI 413 (636)
T ss_dssp -TTTTTCEEECCSCCSSCCSSSCCCCCCCSCCSEEEEECTTCSGG------GCCCCHHHHHHHHHHHHHHHHHHTCCEEE
T ss_pred -CCCeEEEEEECCCCCCcccccCCcccCCCCCeEEEECCCCCCCC------CCCCCHHHHHHHHHHHHHHHHHcCCEEEE
Confidence 444 8999999998654 222 246899999999998742 12332 3344444444 4767777
Q ss_pred EeeccCCCCCCc-cccc----ccCCceEEeeeCcEEe
Q 002976 792 LTHFSQRYPKIP-VVDE----THMHKTCIAFDLMSIN 823 (861)
Q Consensus 792 LtHfS~Ry~~~~-~~~~----~~~~~v~~A~D~m~i~ 823 (861)
.+|-..|....- .+.+ ...+++-++.|+|.+.
T Consensus 414 p~fa~GR~qell~~l~~~~~~~~~~~~~V~~dg~~~~ 450 (636)
T 2ycb_A 414 PVFAVGRAQELMIVLEEYIRTGIIDEVPVYIDGMIWE 450 (636)
T ss_dssp ECCTTTHHHHHHHHHHHHHHTTSSCCCCEEEEHHHHH
T ss_pred EECCCcHHHHHHHHHHHHHHhCCCCCCeEEEehHHHH
Confidence 777545532210 1111 1123467788888765
No 23
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=99.67 E-value=5.3e-16 Score=180.83 Aligned_cols=207 Identities=19% Similarity=0.240 Sum_probs=134.9
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCcc-------chhhhhccccEEEEeccchh
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVE-------GADSAVRKLRCIWISHIHAD 562 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~-------~~~~~l~~i~~IfISH~H~D 562 (861)
+.|++++||..+.+. .+|++|+. ++..+|||||.+.... ..+|.+ .+.....+|++|||||.|.|
T Consensus 7 ~~i~i~~lGg~~eiG-----~n~~li~~-~~~~iLID~G~~~~~~--~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~D 78 (555)
T 3zq4_A 7 DQTAVFALGGLGEIG-----KNTYAVQF-QDEIVLIDAGIKFPED--ELLGIDYVIPDYTYLVKNEDKIKGLFITHGHED 78 (555)
T ss_dssp CSEEEEEEESBSSSS-----CCEEEEEE-TTEEEEEEECCBCCCT--TSTTCSEEEECCHHHHTTTTTEEEEEESCCCHH
T ss_pred CcEEEEEcCCCCccC-----CEEEEEEE-CCeEEEEeCCCCCCcc--ccccccccccCHHHHhcCccCCCEEEECCCchh
Confidence 568999999777542 57999998 7889999999764221 011211 11223578999999999999
Q ss_pred hhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCC
Q 002976 563 HHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPF 642 (861)
Q Consensus 563 H~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 642 (861)
|++|++.++.. -.+.||+++.+..++......... +... .
T Consensus 79 Higgl~~l~~~----------~~~pIy~t~~t~~ll~~~l~~~~~--------------~~~~--------~-------- 118 (555)
T 3zq4_A 79 HIGGIPYLLRQ----------VNIPVYGGKLAIGLLRNKLEEHGL--------------LRQT--------K-------- 118 (555)
T ss_dssp HHTTHHHHHTT----------CCCCEEECHHHHHHHHHHHHHHST--------------TTTC--------C--------
T ss_pred hhCCHHHHHHh----------cCceEEECHHHHHHHHHHHHHcCc--------------cCCC--------c--------
Confidence 99999988632 135599999998877665321100 0000 0
Q ss_pred CccccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeecc-CCCCceEEEeccccccc
Q 002976 643 STEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVH-CPQAFGFALKAAERINS 721 (861)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H-~~~a~G~~i~~~~~~~~ 721 (861)
+.. ..++..+ .+|.++++++++.| +.+++||.++.
T Consensus 119 -------------------~~~--v~~g~~~-----------------~ig~~~v~~~~~~H~~pgs~~~~i~~------ 154 (555)
T 3zq4_A 119 -------------------LNI--IGEDDIV-----------------KFRKTAVSFFRTTHSIPDSYGIVVKT------ 154 (555)
T ss_dssp -------------------EEE--CCTTCCE-----------------EETTEEEEEEEEBCSSSSEEEEEEEE------
T ss_pred -------------------eEE--eCCCCEE-----------------EECCEEEEEEeCCCCCcCcEEEEEEE------
Confidence 000 0112221 35778999999999 67899999987
Q ss_pred cCcccCCcEEEEeCCCCCCh-------hHHhhc----CCCcEEEEeccCCCChHHHHHhcCCCCHHHHHH----HHHHcC
Q 002976 722 VGKVIPGWKIVYSGDTRPCP-------ELVEAS----RGATVLIHEATFEDGMMEEAIAKNHSTTKEAID----VGSSAG 786 (861)
Q Consensus 722 ~~~~~~G~ki~YsGDT~p~~-------~l~~~~----~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~----va~~~~ 786 (861)
++.+++||||+.++. .+..+. +++|+||+||||.+.. ..+.+-.++.+ +.++.
T Consensus 155 -----~~~~il~tGD~~~~~~~~~g~~d~~~l~~l~~~~~d~Li~esT~~~~~------~~~~se~~v~~~i~~~~~~~- 222 (555)
T 3zq4_A 155 -----PPGNIVHTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNSENP------EFTMSERRVGESIHDIFRKV- 222 (555)
T ss_dssp -----TTEEEEECCSCBCCSSCSSSCCCHHHHHHHHHTCEEEEEEECTTTTCC------SCCCCHHHHHHHHHHHHHHC-
T ss_pred -----CCcEEEEeCCCCCCCCcCcCccCHHHHHHhcccCCcEEEecCcccCCC------CCCCCHHHHHHHHHHHHHhC-
Confidence 567999999998642 222222 5899999999998742 11222233332 33333
Q ss_pred CCEEEEeeccCCCC
Q 002976 787 VYRIILTHFSQRYP 800 (861)
Q Consensus 787 ak~lvLtHfS~Ry~ 800 (861)
.+++++++|+....
T Consensus 223 ~grvii~~fasnv~ 236 (555)
T 3zq4_A 223 DGRIIFATFASNIH 236 (555)
T ss_dssp CSCEEEECCTTCHH
T ss_pred CCEEEEEEChhHHH
Confidence 46899999985433
No 24
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=99.65 E-value=1.8e-16 Score=169.98 Aligned_cols=245 Identities=13% Similarity=0.152 Sum_probs=145.8
Q ss_pred CccEEEEEecCC--CCCCCCCCccEEEEEEeCCceEEEeCCcchH--HHHHHHhCccchhhhhccccEEEEeccchhhhc
Q 002976 490 DDLEIVLLGTGS--SQPSKYRNVSSIYVNLFSKGSLLLDCGEGTL--GQLKRRYGVEGADSAVRKLRCIWISHIHADHHA 565 (861)
Q Consensus 490 ~~~~i~fLGTGs--a~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~--~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~ 565 (861)
..++|++|=--. ...-...+++|++|+. ++..+|||||.+.. .++.+ .|. .+.+|++|+|||.|.||+.
T Consensus 11 ~~~~it~l~dn~~~~~~~~~~~g~s~li~~-~~~~iLiD~G~~~~~~~~l~~-~g~-----~~~~i~~v~lTH~H~DH~g 83 (284)
T 2p4z_A 11 GSVEVQVLIENVVFARNFVAEHGLSLLLKK-GNKEIVVDTGQSENFIKNCGL-MGI-----DVGRIKKVVLTHGHYDHIG 83 (284)
T ss_dssp CCCEEEEEECSBCCSTTCCBCSSCEEEEEE-TTEEEEECCCSSTHHHHHHHH-TTC-----CGGGCCEEECCCSCHHHHT
T ss_pred CCEEEEEEEeCCCCCcCcccCCEEEEEEEE-CCeEEEEeCCCCHHHHHHHHH-cCC-----ChhhCCEEEECCCCchhhc
Confidence 457788873111 1122345678999987 77899999999853 44444 554 2578999999999999999
Q ss_pred cHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcc
Q 002976 566 GLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTE 645 (861)
Q Consensus 566 GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 645 (861)
|++.+... .+.+.||+++...+ ..+.........|.. + .. +.
T Consensus 84 gl~~~~~~---------~~~~~v~~~~~~~~--~~~~~~~~~~~~~~~--------~-----------~~-----~~--- 125 (284)
T 2p4z_A 84 GLKGLLER---------NPEVKIYTHKEILN--KKYAMRKGGQFEEIG--------F-----------DL-----SF--- 125 (284)
T ss_dssp THHHHHHH---------CTTCEEEEEGGGGS--CEEEECSSSCEEECS--------C-----------CH-----HH---
T ss_pred cHHHHHHH---------cCCCceecCHHHHH--HHhccCccccccccc--------c-----------cc-----ch---
Confidence 99987542 13578998876532 000000000000000 0 00 00
Q ss_pred ccccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCC-c--eEEEecccccccc
Q 002976 646 GLINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQA-F--GFALKAAERINSV 722 (861)
Q Consensus 646 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a-~--G~~i~~~~~~~~~ 722 (861)
..+ . ..++..+ .....+ .-|...+..+|..|...+ . +|+++.
T Consensus 126 ---~~l----~--~~~~~~~--~~~~~i-----------------~~gi~~i~~~~~~h~~~~~~g~~~~~~~------- 170 (284)
T 2p4z_A 126 ---YEK----Y--KNNFVLI--DKDAEI-----------------EEGFYVITNTDITYDNEFTTKNFFVEKE------- 170 (284)
T ss_dssp ---HHH----H--GGGEEEE--SSCEEE-----------------ETTEEEECSCCCCSCCHHHHTTEEEEET-------
T ss_pred ---hhh----c--CceEEEe--CCCeEE-----------------eCCEEEEeeeCCccccccCCCceEEEcC-------
Confidence 000 0 0000000 000000 002234556777776543 2 366642
Q ss_pred CcccCCcEEEEeCCCCCChhHHhhcCCCc--EEEEeccCCC--ChHHHHH------------hcCCC------CHHHHHH
Q 002976 723 GKVIPGWKIVYSGDTRPCPELVEASRGAT--VLIHEATFED--GMMEEAI------------AKNHS------TTKEAID 780 (861)
Q Consensus 723 ~~~~~G~ki~YsGDT~p~~~l~~~~~~aD--lLIhEaTf~d--~~~~~a~------------~~~Hs------T~~eA~~ 780 (861)
++|++|+ .+++...+++++| +||.+|+..- +....+. ...|+ +++++++
T Consensus 171 --------~~y~~D~-~~de~~~~~~~~dglvli~gcsH~Gi~n~l~~~~~~~~~~~i~~~igg~Hl~~~~~~~~~~a~~ 241 (284)
T 2p4z_A 171 --------GKRIPDK-FLDEVFVVVKEEDGINVVTGCSHAGILNILETARNRFGVSYIKSLIGGFHLRGMEEEKVKDIAR 241 (284)
T ss_dssp --------TEEEECC-CTTCCEEEEEETTEEEEEESSCTTCHHHHHHHHHHHHTCSCBSEEEECCCCTTCCHHHHHHHHH
T ss_pred --------CCEecCC-CCCceEEEEEcCCcEEEEECCCCcCHHHHHHHHHHHcCCCceEEEEEcccCCCCCHHHHHHHHH
Confidence 4799996 6666777888999 7799988541 1111110 25599 9999999
Q ss_pred HHHHcCCCEEEEeeccCCCCCCcccccccCCceEEeeeCcEEec
Q 002976 781 VGSSAGVYRIILTHFSQRYPKIPVVDETHMHKTCIAFDLMSINL 824 (861)
Q Consensus 781 va~~~~ak~lvLtHfS~Ry~~~~~~~~~~~~~v~~A~D~m~i~l 824 (861)
.+++++++++++||+++... ...+.+....++.+|+|||+|++
T Consensus 242 ~~~~~~~~~l~l~H~~~~~~-~~~~~~~~~~~v~~a~~G~~i~l 284 (284)
T 2p4z_A 242 KIEEYGVKKVLTGHCTGIDE-YGFLKSVLKDKISYLTTSSSIVV 284 (284)
T ss_dssp HHHHTTBCCEEECGGGCHHH-HHHHHHHHGGGEEECCTTCEEEC
T ss_pred HHHcCCCCEEEeeCcCcHHH-HHHHHHHhCCCEEEcCCCcEEeC
Confidence 99999999999999998532 12233345668999999999975
No 25
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=99.65 E-value=3e-16 Score=186.37 Aligned_cols=194 Identities=13% Similarity=0.133 Sum_probs=120.3
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHH--HHHHHhCccchhh-hhccccEEEEeccchhhhcc
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLG--QLKRRYGVEGADS-AVRKLRCIWISHIHADHHAG 566 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~--qL~r~~g~~~~~~-~l~~i~~IfISH~H~DH~~G 566 (861)
+.|+|+|||+|+.++ .+|++|+. ++..+|||||.+... ++...++ .... .+.+|++|+|||.|.||++|
T Consensus 182 ~~m~I~~LG~~~evg-----~s~~LI~~-~~~~ILID~G~~~~~~~~~l~~l~--~~~~~~~~~Id~VllTH~H~DHiGg 253 (640)
T 2xr1_A 182 QWVRVTALGGCKEVG-----RSCFLLST-PESRILIDCGVNVGSDENMTPYLY--VPEVFPLNQIDAVIVTHAHLDHQGL 253 (640)
T ss_dssp CCCEEEEEECSSSSB-----CCEEEEEC-SSCEEEECCCCBCSSCSSCCCCTT--STTTCSGGGCCEEECCSSCHHHHTT
T ss_pred CceEEEEEecCCCCC-----CcEEEEEE-CCeEEEEeCCCCcccccccccccc--ccccCCcccCcEEEECCCChhhhcc
Confidence 579999999998764 58999987 788999999987421 1110011 0012 46789999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCccc
Q 002976 567 LARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEG 646 (861)
Q Consensus 567 L~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 646 (861)
++.|+.. + ....||++..+..++.....-. .... ... .+ ..++...
T Consensus 254 l~~L~~~------~---~~~~Iy~t~~t~~ll~~~l~d~---~~~~---~~~--g~----------------~~~~~~~- 299 (640)
T 2xr1_A 254 VPLLFKY------G---YEGPVYCTPPTRDLMVLLQLDY---IDVA---AKE--GK----------------KIPYESG- 299 (640)
T ss_dssp HHHHHHT------T---CCSCEEECHHHHHHHHHHHHHH---HHHH---HHH--TC----------------CCCSCHH-
T ss_pred HHHHHhc------C---CCCeEEECHHHHHHHHHHHHHH---HHHh---hhc--cc----------------CCCCCHH-
Confidence 9999752 1 2356999998877665332100 0000 000 00 0000000
Q ss_pred cccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHc-CCceeeEEeeccCCCCceEEEeccccccccCcc
Q 002976 647 LINKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEA-GLETLISFPVVHCPQAFGFALKAAERINSVGKV 725 (861)
Q Consensus 647 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l-g~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~ 725 (861)
.+.. ... .+.. ...+..+ .+ |.++++++++.|+.+++++.++.
T Consensus 300 ---~~~~-~~~---~~~~--l~~g~~i-----------------~l~gg~~v~~~~~GH~~Gs~~~~i~~---------- 343 (640)
T 2xr1_A 300 ---MVAK-TLK---HTIP--LDYEEVT-----------------DIAPDIKLTFHNAGHILGSAISHFHI---------- 343 (640)
T ss_dssp ---HHHH-HHH---TEEE--CCTTCCE-----------------EEETTEEEEEEECSSSTTCEEEEEEE----------
T ss_pred ---HHHH-HHh---ceEE--eCCCCEE-----------------EecCCEEEEEEcCCCCcCcEEEEEEE----------
Confidence 0000 000 0000 0112211 35 67889999999999999999986
Q ss_pred cCCc--EEEEeCCCCCChh-HHh----hcCCCcEEEEeccCCCC
Q 002976 726 IPGW--KIVYSGDTRPCPE-LVE----ASRGATVLIHEATFEDG 762 (861)
Q Consensus 726 ~~G~--ki~YsGDT~p~~~-l~~----~~~~aDlLIhEaTf~d~ 762 (861)
++. +++||||+++++. +.+ ...++|+||+||||.+.
T Consensus 344 -~~~~~~ilftGD~~~~~~~ll~~~~~~~~~~DvLi~EsT~g~~ 386 (640)
T 2xr1_A 344 -GDGLHNVVFTGDYKYEKTRLFDPAVNKFPRVETVISEATYGNA 386 (640)
T ss_dssp -TTTTEEEEECCSCCSSCCSSCCCCCCBCSCCSEEEEECTTCST
T ss_pred -CCceEEEEEECCCCCCCccccccccccCCCCcEEEECCCCCCC
Confidence 455 9999999987653 322 24589999999999874
No 26
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=99.63 E-value=1.7e-15 Score=180.92 Aligned_cols=230 Identities=12% Similarity=0.075 Sum_probs=132.5
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcch----HHHHHHHhCccchhhhhccccEEEEeccchhhhccH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGT----LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGL 567 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt----~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL 567 (861)
|+++|||+|++. .+.+|++|+. ++..||||||.+. +..+...+ .....+|++|||||.|.||++||
T Consensus 1 m~~t~L~gg~~e----v~~n~~LIe~-~~~~ILID~G~~~~~~~~~~~l~~L-----~~~~~~IdaVlLTH~H~DHiGgL 70 (717)
T 2i7x_A 1 MTYKYNCCDDGS----GTTVGSVVRF-DNVTLLIDPGWNPSKVSYEQCIKYW-----EKVIPEIDVIILSQPTIECLGAH 70 (717)
T ss_dssp CCEEEEECCSSS----SSCCCEEEEE-TTEEEEECCCCCTTTSCHHHHHHHH-----HTTGGGCCEEECCCSSHHHHTTH
T ss_pred CEEEEEeecCCC----CCCCEEEEEE-CCeEEEEeCCCCcccchhhhHHHHH-----HhcCCCCCEEEECCCChHHHCCH
Confidence 579999988763 3578999998 7889999999875 12211111 11124899999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCcccc
Q 002976 568 ARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGL 647 (861)
Q Consensus 568 ~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~ 647 (861)
+.|+..+...+ ...+.||++..+..++..+..-. +. ... .+..+. ..++....
T Consensus 71 p~L~~~~~~g~----~~~~pIY~t~~t~~l~~~~l~d~---~~---~~~----~~~~~~------------~~~~~~~~- 123 (717)
T 2i7x_A 71 SLLYYNFTSHF----ISRIQVYATLPVINLGRVSTIDS---YA---SAG----VIGPYD------------TNKLDLED- 123 (717)
T ss_dssp HHHHHHSHHHH----HHTCEEEEEHHHHHHHHHHHHHH---HH---HTT----SSSSBT------------TCCSCHHH-
T ss_pred HHHHHhhhhcc----cCCceEEecchhHHHHHHHHHHH---HH---hhc----cccccc------------cccccHHH-
Confidence 99985421000 02367999988776554332100 00 000 000000 00000000
Q ss_pred ccccchhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHc----CCceeeEEeeccCCCCceEEEeccccccccC
Q 002976 648 INKTEANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEA----GLETLISFPVVHCPQAFGFALKAAERINSVG 723 (861)
Q Consensus 648 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l----g~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~ 723 (861)
+. ..+. .+..+ ..+..+ .+ |.++|+++++.|+.++++|.|+.
T Consensus 124 ---v~-~~~~---~i~~l--~~ge~i-----------------~l~~~~ggi~V~~~~aGHs~Gs~~~~I~~-------- 169 (717)
T 2i7x_A 124 ---IE-ISFD---HIVPL--KYSQLV-----------------DLRSRYDGLTLLAYNAGVCPGGSIWCIST-------- 169 (717)
T ss_dssp ---HH-HHHH---TSEEE--CTTCCE-----------------EETTTTTTEEEEEEECSSSTTCEEEEEEC--------
T ss_pred ---HH-hhhh---ceEEe--cCCCEE-----------------EEeecCCCEEEEEECCCCCCCcEEEEEEe--------
Confidence 00 0000 00000 111111 23 67899999999999999999986
Q ss_pred cccCCcEEEEeCCCCCChh-H-------------HhhcCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHH---cC
Q 002976 724 KVIPGWKIVYSGDTRPCPE-L-------------VEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSS---AG 786 (861)
Q Consensus 724 ~~~~G~ki~YsGDT~p~~~-l-------------~~~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~---~~ 786 (861)
++.+|+|+||++.... + .+.+.++|+||+||||.+..... +....+..+...+ .+
T Consensus 170 ---~~~~IvytGD~~~~~~~~l~~~~~L~~~g~~l~~l~~~D~LI~EsTy~~~~h~~-----~~~~~~l~~~i~~~l~~~ 241 (717)
T 2i7x_A 170 ---YSEKLVYAKRWNHTRDNILNAASILDATGKPLSTLMRPSAIITTLDRFGSSQPF-----KKRSKIFKDTLKKGLSSD 241 (717)
T ss_dssp ---SSCEEEECSSCCSSCCSSCCCCTTBCTTSCBCSTTSSCSEEEECCSCCCCSSCH-----HHHHHHHHHHHHHHTSTT
T ss_pred ---CCCEEEEECCCCCCcccccCccccccccchhHHhccCCcEEEEcCCCCCCCCCC-----HHHHHHHHHHHHHHHhCC
Confidence 5679999999975422 1 12345899999999997643110 1122333333333 45
Q ss_pred CCEEEEeeccCCCC
Q 002976 787 VYRIILTHFSQRYP 800 (861)
Q Consensus 787 ak~lvLtHfS~Ry~ 800 (861)
.+.+|.+|-+.|..
T Consensus 242 G~VlIp~fa~gR~q 255 (717)
T 2i7x_A 242 GSVIIPVDMSGKFL 255 (717)
T ss_dssp CEEEEEECTTTHHH
T ss_pred CeEEEEeccchHHH
Confidence 56777777775543
No 27
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=99.55 E-value=1.3e-14 Score=160.31 Aligned_cols=170 Identities=16% Similarity=0.222 Sum_probs=110.4
Q ss_pred EEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHH
Q 002976 493 EIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILA 572 (861)
Q Consensus 493 ~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~ 572 (861)
++.|.++.++.|...|..+.+++ . ++..+++|+.. ++ .+.+|++|||||.|.||++|++.
T Consensus 11 ~~~~~~~~~~~~~~~~~~p~~~~-~-pG~~ilVD~f~---------~~------~~~~IdaI~lTH~H~DHiggl~~--- 70 (367)
T 4b87_A 11 NKKIPESSNVGGSRKKTCPFYKK-I-PGTGFTVDAFQ---------YG------VVEGCTAYFLTHFHSDHYAGLSK--- 70 (367)
T ss_dssp ------------CCCCCCCGGGB-C-TTSSEEESCCS---------SS------SCTTCCEEECCCCCHHHHTTCST---
T ss_pred hhcccccccCCCCCCCCCceEEE-E-CCCeEEEeCCC---------cC------CccCCcEEEECcChHHHhCCccc---
Confidence 34566677778888887665443 5 67789999853 22 25789999999999999999972
Q ss_pred HHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCccccccccc
Q 002976 573 LRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTE 652 (861)
Q Consensus 573 ~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~ 652 (861)
. ..+.||+++.+..++........ ..+..
T Consensus 71 -------~---~~~pIy~s~~t~~ll~~~l~~~~--~~~~~--------------------------------------- 99 (367)
T 4b87_A 71 -------H---FTFPVYCSEITGNLLKNKLHVQE--QYIHP--------------------------------------- 99 (367)
T ss_dssp -------T---CCSCEEECHHHHHHHHHHSCCCG--GGEEE---------------------------------------
T ss_pred -------c---cCCcEEECHHHHHHHHHHhcccc--ceEEE---------------------------------------
Confidence 1 23569999999888765422110 00000
Q ss_pred hhhhcccccccccccCCCCCCCCCcchhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccccccCcccCCcEEE
Q 002976 653 ANLFAKGSCMQSVWKGPGIPVDNNAAFPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKIV 732 (861)
Q Consensus 653 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~~~G~ki~ 732 (861)
+ ..+..+ .+|.++|+++++.|+.+++||.|+.. +|.+++
T Consensus 100 ---------l-----~~g~~~-----------------~ig~~~v~~~~agH~~gs~~~~i~~~----------~g~~il 138 (367)
T 4b87_A 100 ---------L-----PLDTEC-----------------IVNGVKVVLLDANHCPGAVMILFYLP----------NGTVIL 138 (367)
T ss_dssp ---------C-----CBTSCE-----------------EETTEEEEEEECSSSTTCEEEEEECT----------TSCEEE
T ss_pred ---------e-----CCCCEE-----------------EECCEEEEEEeCCCcCCcEEEEEEcC----------CCcEEE
Confidence 0 011111 35778999999999999999999852 567899
Q ss_pred EeCCCCCChhHHh--hc-CCCcEEEEeccCCCChHHHHHhcCCCCHHHHHH
Q 002976 733 YSGDTRPCPELVE--AS-RGATVLIHEATFEDGMMEEAIAKNHSTTKEAID 780 (861)
Q Consensus 733 YsGDT~p~~~l~~--~~-~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~ 780 (861)
||||++.++.... +. +++|+||+||||.+. ...|.+-+++++
T Consensus 139 ~tGD~~~~~~~~~~~l~~~~~D~Li~EsTy~~~------~~~~ps~~~~~~ 183 (367)
T 4b87_A 139 HTGDFRADPSMERSLLADQKVHMLYLDTTYCSP------EYTFPSQQEVIR 183 (367)
T ss_dssp ECCSCCCCGGGGGSGGGTSCCCEEEECCTTCST------TCCCCCHHHHHH
T ss_pred EecCcccCcccchhhhccCCCCEEEEecccCCC------CCCCCCHHHHHH
Confidence 9999999876543 32 589999999999974 234666665544
No 28
>3md7_A Beta-lactamase-like; ssgcid, hydrolase, structural genomics, structural genomics center for infectious disease; HET: 5GP TLA; 1.27A {Brucella melitensis biovar abortus} PDB: 3qh8_A* 3py6_A* 3py5_A*
Probab=99.52 E-value=3e-14 Score=153.53 Aligned_cols=149 Identities=10% Similarity=0.088 Sum_probs=102.6
Q ss_pred CCeeEEEEEeeCCC--C-----------------CCCCcEEEEEe--C-C--cEEEEEcChhHHHHHHHcCCCcCCCCEE
Q 002976 41 NTLSYVQILGTGMD--T-----------------QDTSPSVLLFF--D-N--QRFIFNAGEGLQRFCTEHKIKLSKVDHI 96 (861)
Q Consensus 41 ~~~~~l~~LGtgs~--~-----------------~~~~~slll~~--~-~--~~yLfD~GeGtqr~l~~~~i~~~ki~~I 96 (861)
+..|+|+|||||+. . .|+.+|++|+. + + ..+|||||+++++++.+.++ .+|++|
T Consensus 26 ~~~m~v~~LG~g~~~G~P~~~c~c~~C~~~~~~~~R~~~s~li~~~~~~g~~~~iLID~G~~~~~~l~~~~~--~~id~I 103 (293)
T 3md7_A 26 RNCLRFTLLGCGSSPGVPRINGDWGKCDPKNPKNRRRRASLLVERYDAEGNNTVVVIDTGPDFRMQMIDSGV--HMLDAA 103 (293)
T ss_dssp CSEEEEEEEECBCTTCBSCTTCCCTTSCTTCGGGCBCBCEEEEEEECTTCCEEEEEECCCTTHHHHHHHHTC--CCCSEE
T ss_pred CCcEEEEEEeecCCCCcccCCCCCccCCccCCCCcccccEEEEEecCCCCceeEEEEECCccHHHHHHhcCC--CcccEE
Confidence 45699999999952 2 24458999996 3 4 79999999999999888665 589999
Q ss_pred EECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCce
Q 002976 97 FLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHI 176 (861)
Q Consensus 97 FiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 176 (861)
||||.|+||++||+.|...+.... .++.||+|+++...+.....+.+.... ...++. ...+. ...++
T Consensus 104 liTH~H~DHi~Gl~~l~~~~~~~~---~~~~vy~~~~~~~~l~~~~~~~~~~~~--~~~~~~----~~~~~----~l~~g 170 (293)
T 3md7_A 104 VYTHPHADHIHGIDDLRTYVVDNG---RLMDVYANRLTRNRLYDTFGYCFETPV--GSSYPP----ILSMH----DIAPE 170 (293)
T ss_dssp ECSCCCHHHHTTGGGGHHHHHHHT---SCEEEEECHHHHHHHHHHCGGGTSCCT--TCCCCC----CEEEE----ECCTT
T ss_pred EEcCCCchhhCCHHHHHHHhhcCC---CceEEEECHHHHHHHHHhhhhhhcccc--ccCCCC----ceEEE----EcCCC
Confidence 999999999999998875432211 368899999988887765443321100 000000 00000 01223
Q ss_pred eEeeCCc----EEEEEEEcCCCCCCCCCCCCCCCeeEEEEE
Q 002976 177 ILVDNEL----AKISAILLKPSCSDGSPVKPGETSVIYVCE 213 (861)
Q Consensus 177 ~~~~d~~----i~V~~~~l~h~~~~~~~~~~~~~s~gY~~~ 213 (861)
..++.++ ++|++++++|.. .+++||+|+
T Consensus 171 ~~~~~g~~~~~~~v~~~~~~H~~---------~~~~g~~i~ 202 (293)
T 3md7_A 171 TPFSIEGAGGAIRFEPFSQVHGD---------IESLGFRIG 202 (293)
T ss_dssp CCEEECCTTCCEEEEEEEEEETT---------EEEEEEEET
T ss_pred CcEEECCCCCcEEEEEEEecCCC---------CCEEEEEEe
Confidence 3455566 999999999973 489999985
No 29
>3jxp_A Coenzyme PQQ synthesis protein B; alpha-beta protein, PQQ biosynthesis, transport, biosyntheti; 2.20A {Pseudomonas putida} SCOP: d.157.1.6 PDB: 1xto_A
Probab=99.50 E-value=8.9e-15 Score=159.11 Aligned_cols=179 Identities=14% Similarity=0.093 Sum_probs=112.1
Q ss_pred CeeEEEEEeeCCC--C---------------------CCCCcEEEEEeCCcE-EEEEcChhHHHHHHHcC-------CCc
Q 002976 42 TLSYVQILGTGMD--T---------------------QDTSPSVLLFFDNQR-FIFNAGEGLQRFCTEHK-------IKL 90 (861)
Q Consensus 42 ~~~~l~~LGtgs~--~---------------------~~~~~slll~~~~~~-yLfD~GeGtqr~l~~~~-------i~~ 90 (861)
|+|+|+|||||+. . .|+.+|++|+.++.+ +|||||++++.++.+.+ +++
T Consensus 1 ~~M~~~~LGtg~s~G~P~~~C~C~~C~~a~~~~~~~~~R~~ss~li~~~~~~~iLiD~G~~~~~~l~~~~~l~~~~~~~~ 80 (321)
T 3jxp_A 1 MMMYIQVLGSAAGGGFPQWNCNCVNCKGYRDGTLKATARTQSSIALSDDGVHWILCNASPDIRAQLQAFAPMQPARALRD 80 (321)
T ss_dssp -CEEEEEEECBCTTTBTTTTCCSHHHHHHHHTCSCCCCBCBCEEEEESSSSSEEEECCCTTHHHHHHTCGGGCCCSSSSC
T ss_pred CeEEEEEEEeCCCCCCCcCCcCCccchhhhhCCCCCCcccceEEEEEeCCceEEEEeCCchHHHHHHhcccccccccCCc
Confidence 5699999999951 0 146799999998876 99999999988887764 467
Q ss_pred CCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcc--cCce--eeeeecCCCCCCCCcC
Q 002976 91 SKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIP--HAAM--VHTHCFGPAPSSDASL 166 (861)
Q Consensus 91 ~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~--~~~~--~~~~~~~~~~~~~~~~ 166 (861)
.+|++|||||.|+||++||+.|.. . .++.||+|+++.+.+.....++. .... +....+
T Consensus 81 ~~i~~i~lTH~H~DH~~gl~~l~~-----~---~~~~vy~~~~~~~~l~~~~~~f~~~~~~~~~i~~~~i---------- 142 (321)
T 3jxp_A 81 TGINAIVLLDSQIDHTTGLLSLRE-----G---CPHQVWCTDMVHQDLTTGFPLFNMLSHWNGGLQWNRI---------- 142 (321)
T ss_dssp CSEEEEECSCCCHHHHGGGGGGGG-----G---CCEEEEECHHHHHHTTTTSCHHHHHTTTTTCEEEEEC----------
T ss_pred ccCCEEEECCCChhhhhhHHHHHh-----c---CCCeEEECHHHHHHHHhhCccccccccccCceeEEEc----------
Confidence 899999999999999999998742 1 25889999988776653211110 0000 111111
Q ss_pred CCCccCCCceeEeeC---CcEEEEEEEcCCCCCCCCCCCCC-----CCeeEEEEE--eCCccCCCCHHHHHHcCCCCChh
Q 002976 167 PDSAKSANHIILVDN---ELAKISAILLKPSCSDGSPVKPG-----ETSVIYVCE--LPEITGKFDPKKAVALGLKPGPK 236 (861)
Q Consensus 167 ~~~~~~~~~~~~~~d---~~i~V~~~~l~h~~~~~~~~~~~-----~~s~gY~~~--~~~~~gkf~~~ka~~lGv~~g~~ 236 (861)
.++..++. ++++|++++++|... ....++ .+++||+|+ ..+++-.|-.| .+..+..+
T Consensus 143 -------~~g~~~~i~~~~~~~V~~~~v~H~~~--~~~~H~~~~~~~~~~Gy~i~~~~~g~~i~y~~D----t~~~~~~~ 209 (321)
T 3jxp_A 143 -------ELEGSFVIDACPNLKFTPFPLRSAAP--PYSPHRFDPHPGDNLGLMVEDTRTGGKLFYAPG----LGQVDEKL 209 (321)
T ss_dssp -------CSSSCEECTTSTTEEEEEEEECCCCC--TTCTTTTSCCTTSEEEEEEEETTTCCEEEEESS----CCCCCHHH
T ss_pred -------CCCCeEEeccCCCeEEEEEEecCCcc--ccccccccccCCCcEEEEEEecCCCcEEEEECC----CCCCCHHH
Confidence 12234555 889999999985310 000112 479999998 44444333333 33222223
Q ss_pred hhhhcCCCcEEeCCCc
Q 002976 237 YRELQSGKSVKSDTLD 252 (861)
Q Consensus 237 ~~~L~~G~~V~l~dg~ 252 (861)
+..+ +|.++.+-|++
T Consensus 210 ~~~~-~~~D~li~eat 224 (321)
T 3jxp_A 210 LAMM-HGADCLLVDGT 224 (321)
T ss_dssp HHHH-HHCSEEEEECC
T ss_pred HHHh-cCCCEEEEeCC
Confidence 3333 34555555553
No 30
>1zkp_A Hypothetical protein BA1088; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.50A {Bacillus anthracis str} SCOP: d.157.1.9
Probab=99.45 E-value=3.6e-13 Score=142.97 Aligned_cols=144 Identities=12% Similarity=0.067 Sum_probs=103.5
Q ss_pred CCeeEEEEEeeCCCCC---CCCcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHh
Q 002976 41 NTLSYVQILGTGMDTQ---DTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLA 117 (861)
Q Consensus 41 ~~~~~l~~LGtgs~~~---~~~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~ 117 (861)
.+.|+|++||+|++.+ +.++|++|..++..+|||||.++.+++.+. +.+.++++|||||.|+||++|++.++....
T Consensus 22 ~~~m~i~~LG~g~~~p~~~~~~~~~li~~~~~~iLiD~G~~~~~~l~~~-~~~~~i~~v~iTH~H~DH~~gl~~l~~~~~ 100 (268)
T 1zkp_A 22 SNAMKMTVVGFWGGFPEAGEATSGYLFEHDGFRLLVDCGSGVLAQLQKY-ITPSDIDAVVLSHYHHDHVADIGVLQYARL 100 (268)
T ss_dssp SSCEEEEEEECBSSSCCTTCCBSEEEEEETTEEEEECCCTTHHHHHTTT-CCGGGCCEEECSCCCHHHHTTHHHHHHHHH
T ss_pred CCCcEEEEEeCCCCcCCCCCCccEEEEEECCcEEEEECCHHHHHHHHHh-CCcccCCEEEEecCCchhhCCHHHHHHHHH
Confidence 3459999999997432 567899999999999999999988777766 777899999999999999999998876532
Q ss_pred cc---CCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcCCC
Q 002976 118 GI---GDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLKPS 194 (861)
Q Consensus 118 ~~---~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~h~ 194 (861)
.. +.....+.||+|++....+.... +.. ......+ ..+..++.++++|++++++|+
T Consensus 101 ~~~~~~~~~~~~~i~~~~~~~~~l~~~~---~~~-~~~~~~~-----------------~~g~~~~~g~~~v~~~~~~H~ 159 (268)
T 1zkp_A 101 ITSATKGQLPELPIYGHTFDENGFHSLT---HEP-HTKGIPY-----------------NPEETLQIGPFSISFLKTVHP 159 (268)
T ss_dssp HHHHHHCCCCCEEEEECSSSHHHHHTTC---BTT-TEEEEEC-----------------CTTSCEEETTEEEEEEECCSS
T ss_pred hcccccCCCCceEEEeCccHHHHHHhcc---cCC-ccceEEe-----------------cCCCeEEECCEEEEEEECCCC
Confidence 11 00112588999999877665321 100 0011111 112234557899999999997
Q ss_pred CCCCCCCCCCCCeeEEEEEeCC
Q 002976 195 CSDGSPVKPGETSVIYVCELPE 216 (861)
Q Consensus 195 ~~~~~~~~~~~~s~gY~~~~~~ 216 (861)
. .++||+++.++
T Consensus 160 ~----------~~~~~~i~~~~ 171 (268)
T 1zkp_A 160 V----------TCFAMRITAGN 171 (268)
T ss_dssp S----------CCEEEEEEETT
T ss_pred C----------CceEEEEEECC
Confidence 4 78999998744
No 31
>2e7y_A TRNAse Z; tRNA maturation, metallo-beta-lactaMSe, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.97A {Thermotoga maritima} SCOP: d.157.1.7 PDB: 1ww1_A
Probab=99.45 E-value=6.9e-14 Score=149.35 Aligned_cols=195 Identities=17% Similarity=0.200 Sum_probs=124.5
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHh-ccCCC
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLA-GIGDE 122 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~-~~~~~ 122 (861)
|+|+.+..|+ .++|+++ ++..+|||||+++++++.+ ...++++|||||.|+||++||+.++.... ..+.+
T Consensus 1 m~i~~~~~g~----~~~~~~i--~~~~iLiD~G~~~~~~l~~---~~~~i~~IliTH~H~DH~~gl~~l~~~~~~~~~~~ 71 (280)
T 2e7y_A 1 MNIIGFSKAL----FSTWIYY--SPERILFDAGEGVSTTLGS---KVYAFKYVFLTHGHVDHIAGLWGVVNIRNNGMGDR 71 (280)
T ss_dssp CCEEEEEETT----TEEEEEE--GGGTEEEEECTTHHHHHGG---GGGGCCEEECSCCCHHHHTTHHHHHHHHHHHSGGG
T ss_pred CEEEEEecCC----ceEEEEE--CCcEEEEECCcchHHHhcc---CccCCCEEEEeCCchhHHCCHHHHHHHHHHhccCC
Confidence 4567777653 4567776 6789999999999876533 45689999999999999999999975432 11111
Q ss_pred CCcEEEEcCccHHHHHHHHHhhccc----Cce-eeeeecCCCCCCCCcCCCCccCCCceeEeeCC-----cEEEEEEEcC
Q 002976 123 GLSVNVWGPSDLKYLVDAMKSFIPH----AAM-VHTHCFGPAPSSDASLPDSAKSANHIILVDNE-----LAKISAILLK 192 (861)
Q Consensus 123 ~~~l~IyGP~gl~~~l~~~~~~~~~----~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~-----~i~V~~~~l~ 192 (861)
..++.||+|++.. .+......... ... .....+ ..+..++.+ +++|+++++.
T Consensus 72 ~~~~~v~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~-----------------~~g~~~~~g~~~~~~~~v~~~~~~ 133 (280)
T 2e7y_A 72 EKPLDVFYPEGNR-AVEEYTEFIKRANPDLRFSFNVHPL-----------------KEGERVFLRNAGGFKRYVQPFRTK 133 (280)
T ss_dssp CCCEEEEEETTCH-HHHHHHHHHHHHCGGGTTTEEEEEE-----------------CTTCCEECCCSSCSCEEEEEEECC
T ss_pred CCCCEEEECccHH-HHHHHHHHHhhcccCCCCceEEEEc-----------------CCCCEEEeCCcccCCEEEEEEEcc
Confidence 1258899999887 66654332100 000 011111 122234444 7999999999
Q ss_pred CCCCCCCCCCCCCC--eeEEEEEeCCccCCCCHHHHHHcCCCCChhhhhhc--CCCcEEeCCCceeecCCCccCCCCCCC
Q 002976 193 PSCSDGSPVKPGET--SVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQ--SGKSVKSDTLDIMVHPSDVLGPSLPGP 268 (861)
Q Consensus 193 h~~~~~~~~~~~~~--s~gY~~~~~~~~gkf~~~ka~~lGv~~g~~~~~L~--~G~~V~l~dg~~~v~p~~v~~~~~~g~ 268 (861)
|+. + ++||+|+..++ +++. ..+|+++ +++..|+ .|+++. ....+|.
T Consensus 134 H~~----------~~~~~g~~i~~~~~--~l~~---~~~g~~~-~~~~~l~~~~g~~~~--------------~~~~~g~ 183 (280)
T 2e7y_A 134 HVS----------SEVSFGYHIFEVRR--KLKK---EFQGLDS-KEISRLVKEKGRDFV--------------TEEYHKK 183 (280)
T ss_dssp SCS----------SSCCEEEEEEEEEE--EECG---GGTTCCH-HHHHHHHHHHCTGGG--------------EEEEEEE
T ss_pred CCC----------CCceEEEEEEEccc--ccCH---hhcCCCH-HHHHHHHhhcCCcee--------------cCCccCC
Confidence 974 5 99999987655 4554 4789874 8888887 554321 1223566
Q ss_pred EEEEE-cCCChhHHHHHhhhhccccccccCCCCcccCCceeEEEEeCCC
Q 002976 269 LVLLV-DCPTESHVLELLSAESLNSYYADFSGDPQCAKTVNCIIHLSPV 316 (861)
Q Consensus 269 ~~~il-D~p~~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~v~H~~~~ 316 (861)
+++|. |+... +.+ ..+++|+++|++..
T Consensus 184 ~i~ysgDt~~~-----~~~----------------~~~~~d~li~e~t~ 211 (280)
T 2e7y_A 184 VLTISGDSLAL-----DPE----------------EIRGTELLIHECTF 211 (280)
T ss_dssp EEEECCSCSSC-----CHH----------------HHTTCSCEEEECCB
T ss_pred EEEEECCCChH-----HHH----------------hhcCCCEEEEeCCc
Confidence 77775 55222 111 12468999999873
No 32
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=99.45 E-value=2.9e-13 Score=147.62 Aligned_cols=168 Identities=17% Similarity=0.177 Sum_probs=113.8
Q ss_pred CCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHH
Q 002976 519 SKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYL 598 (861)
Q Consensus 519 ~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L 598 (861)
.+..+.+|+-.. + ...+|++|||||.|.||++||+.++ .+.||+++.+..++
T Consensus 8 ~g~~i~vD~f~~---------~------~~~~i~ai~lTH~H~DHiggl~~l~-------------~~pVy~s~~t~~ll 59 (336)
T 3zdk_A 8 PHTPIAVDFWSL---------R------RAGTARLFFLSHMHSDHTVGLSSTW-------------ARPLYCSPITAHLL 59 (336)
T ss_dssp TTSSEEESCCCH---------H------HHCSSCEEECCCCCGGGSTTCSTTC-------------CSCEEECHHHHHHH
T ss_pred CCCCEeecCCcc---------c------CCCCCCEEEECCChHHHHCchHHHc-------------CCCEEecHHHHHHH
Confidence 466788887641 1 1368999999999999999998751 25699999999988
Q ss_pred HHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCCCccccccccchhhhcccccccccccCCCCCCCCCcc
Q 002976 599 DAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPFSTEGLINKTEANLFAKGSCMQSVWKGPGIPVDNNAA 678 (861)
Q Consensus 599 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 678 (861)
+........ .+.. +. .+.++. .++..
T Consensus 60 ~~~l~~~~~--~~~~-----------~~-----------~~~~~~------------------------i~~~~------ 85 (336)
T 3zdk_A 60 HRHLQVSKQ--WIQA-----------LE-----------VGESHV------------------------LPLDE------ 85 (336)
T ss_dssp HHHHCCCTT--TEEE-----------CC-----------TTSEEE------------------------EESSS------
T ss_pred HHhhhhccc--ceEe-----------cC-----------CCCeEE------------------------ecCcc------
Confidence 765321110 0000 00 000000 00101
Q ss_pred hhhhHhHHHHHHHcCCceeeEEeeccCCCCceEEEeccccccccCcccCCcEEEEeCCCCCChhHHh-----hcCCCcEE
Q 002976 679 FPLLKNLKNVLNEAGLETLISFPVVHCPQAFGFALKAAERINSVGKVIPGWKIVYSGDTRPCPELVE-----ASRGATVL 753 (861)
Q Consensus 679 ~~~~~~~~~~~~~lg~~~i~~~pv~H~~~a~G~~i~~~~~~~~~~~~~~G~ki~YsGDT~p~~~l~~-----~~~~aDlL 753 (861)
..+|.++|+++++.|+.+++||.|+. ++.+|+||||+++++.... ..+++|+|
T Consensus 86 -----------~~~g~~~v~~~~~~H~~gs~~~~i~~-----------~~~~i~~tGD~~~~~~~~~~~~l~~~~~vD~L 143 (336)
T 3zdk_A 86 -----------IGQETMTVTLLDANHCPGSVMFLFEG-----------YFGTILYTGDFRYTPSMLKEPALTLGKQIHTL 143 (336)
T ss_dssp -----------SSSCEEEEEEEECSSSTTCEEEEEEE-----------TTEEEEECCSCCCCGGGGGCGGGSSCCCCSEE
T ss_pred -----------cccCCEEEEEEECCCCcceEEEEEEe-----------CCceEEEeCCCCCCcccccchhhhccCCccEE
Confidence 02467899999999999999999986 6779999999999877644 25799999
Q ss_pred EEeccCCCChHHHHHhcCCCCH----HHHHHHHHHcCCCEEEEeecc
Q 002976 754 IHEATFEDGMMEEAIAKNHSTT----KEAIDVGSSAGVYRIILTHFS 796 (861)
Q Consensus 754 IhEaTf~d~~~~~a~~~~HsT~----~eA~~va~~~~ak~lvLtHfS 796 (861)
|+||||.+.. ..|.+- +++.++.++...+++++++|+
T Consensus 144 i~DsT~~~~~------~~~pse~~v~~~l~~~i~~~~~g~vii~~f~ 184 (336)
T 3zdk_A 144 YLDNTNCNPA------LVLPSRQEAAHQIVQLIRKHPQHNIKIGLYS 184 (336)
T ss_dssp EECCTBCCTT------CCCCCHHHHHHHHHHHHHTCTTSEEEEEECS
T ss_pred EEecCCCCCC------CCCCCHHHHHHHHHHHHHhCCCCcEEEeecc
Confidence 9999998742 123332 345556666655699999993
No 33
>3g1p_A Protein PHNP; C-P lyase, phosphodiesterase, phosphonate utilization, alkylphosphonate uptake; 1.40A {Escherichia coli} PDB: 3p2u_A
Probab=99.42 E-value=2.4e-13 Score=143.53 Aligned_cols=171 Identities=16% Similarity=0.168 Sum_probs=111.0
Q ss_pred CeeEEEEEeeCCCC---------------------CCCCcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECc
Q 002976 42 TLSYVQILGTGMDT---------------------QDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSR 100 (861)
Q Consensus 42 ~~~~l~~LGtgs~~---------------------~~~~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH 100 (861)
|.|+|+|||||+.. .|+.+|++|+.++..+|||||.+..+. .+...++++|||||
T Consensus 1 m~~~~~~LGtg~~~g~P~~~c~C~~C~~ar~~~~~~r~~s~~li~~~~~~iLiD~G~~~~~~----~~~~~~id~IliTH 76 (258)
T 3g1p_A 1 MSLTLTLTGTGGAQGVPAWGCECAACARARRSPQYRRQPCSGVVKFNDAITLIDAGLHDLAD----RWSPGSFQQFLLTH 76 (258)
T ss_dssp -CEEEEEEECBCSSCBSCTTCCSHHHHHHHHCGGGCBCBSEEEEEETTEEEEECCCCTTHHH----HCCTTSSCEEECSC
T ss_pred CceEEEEEEeCCCCCCccCCcCChhhhhhhhCccccccCceEEEEECCcEEEEECCchHHHh----hcCcccCCEEEEcc
Confidence 56999999999421 256789999999999999999765432 34567899999999
Q ss_pred CCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeee-eecCCCCCCCCcCCCCccCCCceeEe
Q 002976 101 VCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHT-HCFGPAPSSDASLPDSAKSANHIILV 179 (861)
Q Consensus 101 ~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 179 (861)
.|+||++|++.+. . ....++.||+|++...+ ...+........ .. ...+..+
T Consensus 77 ~H~DHi~gl~~l~----~--~~~~~~~v~~~~~~~~~----~~~~~~~~~~~~~~~-----------------~~~g~~~ 129 (258)
T 3g1p_A 77 YHMDHVQGLFPLR----W--GVGDPIPVYGPPDEQGC----DDLFKHPGLLDFSHT-----------------VEPFVVF 129 (258)
T ss_dssp CCHHHHGGGTTTT----T--CSSSCEEEEECCCSSCS----TTTTTSCTTEEEEEE-----------------CCTTCCE
T ss_pred CchhHhCCHHHHh----c--cCCCCeEEEeChhhhhH----HHHhcCCCccccccc-----------------cCCCCeE
Confidence 9999999997663 1 11235889999976511 011100101000 11 1223356
Q ss_pred eCCcEEEEEEEcCCCCCCCCCCCCCCCeeEEEEEeCCccCCCCHHHHHHcCCCCChhhhhhc-CCCcEEeCCCceeecCC
Q 002976 180 DNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEITGKFDPKKAVALGLKPGPKYRELQ-SGKSVKSDTLDIMVHPS 258 (861)
Q Consensus 180 ~d~~i~V~~~~l~h~~~~~~~~~~~~~s~gY~~~~~~~~gkf~~~ka~~lGv~~g~~~~~L~-~G~~V~l~dg~~~v~p~ 258 (861)
+.++++|++++++|+. .++||+++..+++--|-.| .+..+...+..++ .+.++.+-+.+ +.++
T Consensus 130 ~~g~~~v~~~~~~H~~----------~~~g~~i~~~~~~i~~~GD----t~~~~~~~~~~l~~~~~Dlli~e~t--~~~~ 193 (258)
T 3g1p_A 130 DLQGLQVTPLPLNHSK----------LTFGYLLETAHSRVAWLSD----TAGLPEKTLKFLRNNQPQVMVMDCS--HPPR 193 (258)
T ss_dssp EETTEEEEEEECCSSS----------CCEEEEEECSSCEEEEECS----CSSCCHHHHHHHHHTCCSEEEEECC--BSSC
T ss_pred EECCEEEEEEECCCCC----------CceEEEEEeCCcEEEEECC----CCCCCHHHHHHHHhCCCCEEEEeCC--CCCc
Confidence 6678999999999974 7899999987655444433 2322323455564 56677666553 5444
Q ss_pred C
Q 002976 259 D 259 (861)
Q Consensus 259 ~ 259 (861)
+
T Consensus 194 ~ 194 (258)
T 3g1p_A 194 A 194 (258)
T ss_dssp S
T ss_pred c
Confidence 4
No 34
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=99.23 E-value=3e-11 Score=124.29 Aligned_cols=84 Identities=15% Similarity=0.256 Sum_probs=62.9
Q ss_pred CccEEEEEecCCCC--CC--CCCCccEEEEEEeCCceEEEeCCcc-----hHHHHHHHhCccchhhhhccccEEEEeccc
Q 002976 490 DDLEIVLLGTGSSQ--PS--KYRNVSSIYVNLFSKGSLLLDCGEG-----TLGQLKRRYGVEGADSAVRKLRCIWISHIH 560 (861)
Q Consensus 490 ~~~~i~fLGTGsa~--Ps--~~Rn~Ss~ll~~~~~~~iLlDcGeg-----t~~qL~r~~g~~~~~~~l~~i~~IfISH~H 560 (861)
-.|+|+|+|+++.+ |. ..+.++|++|+. ++..+|||||.+ ...+|.+ .|. .+.+|++|+|||.|
T Consensus 11 ~~~~~~~~~~~g~~~~p~~~~~~~~n~~li~~-~~~~iLID~G~~~~~~~l~~~l~~-~g~-----~~~~i~~ViiTH~H 83 (221)
T 1ztc_A 11 HHMELKILVTGGNVFVPGRLNAHFSTVVYLEH-KDRRIIIDPGNLSSMDELEEKFSE-LGI-----SPDDITDVLFTHVH 83 (221)
T ss_dssp CCEEEEEEECCBEEEETTTEECCBCCEEEEEE-TTEEEEECCCCGGGHHHHHHHHHH-HTC-----CGGGCCEEECSCCC
T ss_pred cceeEEEEEecceEEecCCCCCCceEEEEEEe-CCeEEEEECCCCcchHHHHHHHHH-cCC-----CHHHCcEEEEcCCc
Confidence 46999999999863 33 347789999987 778999999975 2333333 454 24689999999999
Q ss_pred hhhhccHHHHHHHHHHhhcCCCCCCeEEEeCch
Q 002976 561 ADHHAGLARILALRRDLLKGVPHEPLLVVGPGP 593 (861)
Q Consensus 561 ~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~ 593 (861)
.||+.|+..+. ...||+++.
T Consensus 84 ~DH~gg~~~~~-------------~~~v~~~~~ 103 (221)
T 1ztc_A 84 LDHIFNSVLFE-------------NATFYVHEV 103 (221)
T ss_dssp HHHHGGGGGCT-------------TCEEEEEGG
T ss_pred cccCCchhhCC-------------CCEEEEeHH
Confidence 99999986441 356888776
No 35
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=99.18 E-value=1.2e-10 Score=122.32 Aligned_cols=90 Identities=20% Similarity=0.217 Sum_probs=63.0
Q ss_pred CccEEEEEecCCCC----------CCC---CCCccEEEEEEeCCceEEEeCCcc--------------------------
Q 002976 490 DDLEIVLLGTGSSQ----------PSK---YRNVSSIYVNLFSKGSLLLDCGEG-------------------------- 530 (861)
Q Consensus 490 ~~~~i~fLGTGsa~----------Ps~---~Rn~Ss~ll~~~~~~~iLlDcGeg-------------------------- 530 (861)
..|+|+.|++|.-. |.. .-.++|++|+. +++.||||||.+
T Consensus 6 ~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~lI~~-~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 84 (254)
T 3dha_A 6 TVKKLYFIPAGRCMLDHSSVNSALTPGKLLNLPVWCYLLET-EEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEE 84 (254)
T ss_dssp CBSEEEEEEEEEEEEEGGGTSTTSCSCCEEEEEEEEEEEEE-TTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGG
T ss_pred CceEEEEecCccEEechhhccCCCCCCceEEEeeEEEEEEC-CCccEEEECCCChhhhcccccccccccccccccccCch
Confidence 45789999988621 111 12246889987 788999999976
Q ss_pred --hHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHH
Q 002976 531 --TLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLD 599 (861)
Q Consensus 531 --t~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~ 599 (861)
...+|.+ .|. .+.+|++|+|||.|.||++|+..+ ....||+++...+++.
T Consensus 85 ~~l~~~l~~-~g~-----~~~~I~~VilTH~H~DH~gg~~~~-------------~~~~i~~~~~~~~~~~ 136 (254)
T 3dha_A 85 DRIVNILKR-VGY-----EPDDLLYIISSHLHFDHAGGNGAF-------------TNTPIIVQRTEYEAAL 136 (254)
T ss_dssp GSHHHHHHH-HTC-----CGGGCSEEECSCCSHHHHTTGGGC-------------SSSCEEEEHHHHHHHH
T ss_pred hhHHHHHHH-cCC-----CHHHCCEEEcCCChhhcCCChHHC-------------CCCEEEECHHHHHHhh
Confidence 2334443 554 246799999999999999998744 1356888887776654
No 36
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=99.17 E-value=2.4e-11 Score=129.19 Aligned_cols=89 Identities=25% Similarity=0.253 Sum_probs=63.6
Q ss_pred ccEEEEEecCCCC-C------C----C--CCCccEEEEEEeCCceEEEeCCcchH--------------------HHHHH
Q 002976 491 DLEIVLLGTGSSQ-P------S----K--YRNVSSIYVNLFSKGSLLLDCGEGTL--------------------GQLKR 537 (861)
Q Consensus 491 ~~~i~fLGTGsa~-P------s----~--~Rn~Ss~ll~~~~~~~iLlDcGegt~--------------------~qL~r 537 (861)
+|+|++||+|... | . . ...++|++|+. +++.+|||||.+.. .+|.+
T Consensus 3 ~~~i~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~li~~-~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 81 (274)
T 3aj3_A 3 DTKVYLLDGGSLVLDGYHVFWNRGPGGEVRFPVYSILIEH-AEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGL 81 (274)
T ss_dssp CCEEEEEEEEEEEEEHHHHTTTTCCCSEEEEEEEEEEEEE-TTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHH
T ss_pred ccEEEEEcCceEEechHheecCCCCCcEEEeeEEEEEEEe-CCccEEEECCCCcccccCccccCCcccCccccHHHHHHH
Confidence 5899999999852 1 0 0 12247888887 67899999998863 23333
Q ss_pred HhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHH
Q 002976 538 RYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLD 599 (861)
Q Consensus 538 ~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~ 599 (861)
.|. .+.+|++|+|||.|.||++|+..+ ....||+++...+++.
T Consensus 82 -~g~-----~~~~i~~VilTH~H~DH~gg~~~~-------------~~a~v~~~~~~~~~~~ 124 (274)
T 3aj3_A 82 -LGL-----EPRDIDVVVNSHFHFDHCGGNKYF-------------PHAKKICHRSEVPQAC 124 (274)
T ss_dssp -TTC-----CGGGCCEEECSCCSGGGTTTGGGC-------------TTSEEEEETTHHHHHH
T ss_pred -cCC-----CHHHCCEEEecCcCcccCCchhhC-------------CCCEEEECHHHHHHHh
Confidence 454 246899999999999999998654 1246888887766554
No 37
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=99.15 E-value=5.9e-11 Score=126.29 Aligned_cols=188 Identities=15% Similarity=0.177 Sum_probs=110.4
Q ss_pred ccEEEEEEeCCceEEEeCCcchH---------------------------HHHHHHhCccchhhhhccccEEEEeccchh
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGTL---------------------------GQLKRRYGVEGADSAVRKLRCIWISHIHAD 562 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt~---------------------------~qL~r~~g~~~~~~~l~~i~~IfISH~H~D 562 (861)
++|++|+. ++..+|||||.+.. .+|.+ .|. .+.+|++|+|||.|.|
T Consensus 43 ~~~~li~~-~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~-~g~-----~~~~i~~VilTH~H~D 115 (276)
T 2r2d_A 43 VSAYLIQC-TDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQ-LGL-----SPDDISTVVLSHLHND 115 (276)
T ss_dssp EEEEEEEC-SSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHH-TTC-----CGGGCSEEECSCCSTT
T ss_pred eEEEEEEC-CCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHH-cCC-----CHHHCCEEEecCcccc
Confidence 47899987 67899999997753 23433 454 2568999999999999
Q ss_pred hhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHHhcccccceeeecccccccccccccCCCCCcccCCCCCCCC
Q 002976 563 HHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYERLEDLDMQFLHCRYTREASWNDFEGNGEPVKNLSTPGSPF 642 (861)
Q Consensus 563 H~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~ 642 (861)
|++|+..+ ....||+++...+++............+... .+...
T Consensus 116 H~gg~~~~-------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~----------------- 159 (276)
T 2r2d_A 116 HAGCVEYF-------------GKSRLIAHEDEFATAVRYFATGDHSSPYIVK------DIEAW----------------- 159 (276)
T ss_dssp TSTTGGGC-------------SSSEEEEEHHHHHHHHHHHHTTCCSSSSCHH------HHHHH-----------------
T ss_pred cCCChhhC-------------CCCEEEECHHHHHHHhccccccccccccchH------Hhhhh-----------------
Confidence 99999754 2357888887776665432110000000000 00000
Q ss_pred CccccccccchhhhcccccccccccCC-CCCCCCCcchhhhHhHHHHHHHcC-CceeeEE-eeccCCCCceEEEeccccc
Q 002976 643 STEGLINKTEANLFAKGSCMQSVWKGP-GIPVDNNAAFPLLKNLKNVLNEAG-LETLISF-PVVHCPQAFGFALKAAERI 719 (861)
Q Consensus 643 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~~~~lg-~~~i~~~-pv~H~~~a~G~~i~~~~~~ 719 (861)
+.....+..+ .+ +..+ +++ .+++..+ | .|+.+++++.++.
T Consensus 160 -------------~~~~~~~~~~--~~~g~~~-----------------~l~~~~~v~~~~p-gHt~g~~~~~~~~---- 202 (276)
T 2r2d_A 160 -------------LATPRNWDLV--GRDERER-----------------ELAPGVNLLNFGT-GHASGMLGLAVRL---- 202 (276)
T ss_dssp -------------TTSCCCEEEE--CTTCCEE-----------------EEETTEEEEEEES-SSSSSEEEEEEEC----
T ss_pred -------------ccccccceec--cCCCcee-----------------EecCCEEEEeCCC-CCCceeEEEEEEc----
Confidence 0000000000 00 1110 232 4677777 7 8999999999985
Q ss_pred cccCcccCC-cEEEEeCCCCCChhHHhh-cCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccC
Q 002976 720 NSVGKVIPG-WKIVYSGDTRPCPELVEA-SRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQ 797 (861)
Q Consensus 720 ~~~~~~~~G-~ki~YsGDT~p~~~l~~~-~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~ 797 (861)
++ .+++|+||+.++...+.. ...++ +..+. ...|.|.+.+.+++.+.+. .++++|...
T Consensus 203 -------~~~~~vl~~GD~~~~~~~~~~~~~~~~-------~~~d~-----~~~~~sl~~l~~l~~~~~~-~v~~~H~~~ 262 (276)
T 2r2d_A 203 -------EKQPGFLLVSDACYTATNYGPPARRAG-------VLHDT-----IGYDRTVSHIRQYAESRSL-TVLFGHDRE 262 (276)
T ss_dssp -------SSSCEEEEEETTSCCHHHHSSSCCCCS-------SCSCH-----HHHHHHHHHHHHHHHHTTC-EEEESSCHH
T ss_pred -------CCCceEEEEechhhhHHHhcccCCCCc-------cccCH-----HHHHHHHHHHHHHHhcCCC-EEEeCCCHH
Confidence 44 699999999998754332 12221 11111 2346677777777766555 999999754
No 38
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=99.14 E-value=3.9e-10 Score=132.05 Aligned_cols=69 Identities=23% Similarity=0.397 Sum_probs=53.2
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcch----------------------------HHHHHHHhCc
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGT----------------------------LGQLKRRYGV 541 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt----------------------------~~qL~r~~g~ 541 (861)
..++|+||.+|.+ ...|++|+. ++..||||||.+. ...|.+ .|
T Consensus 4 ~~~~I~~ldvG~g------qg~~~lI~~-~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~-~g- 74 (547)
T 2bib_A 4 SGNKIHFINVQEG------GSDAIILES-NGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKE-LS- 74 (547)
T ss_dssp SCEEEEEECBSSS------BCCEEEEEE-TTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHH-TT-
T ss_pred cCceEEEEEcCCC------CceEEEEEe-CCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHh-cC-
Confidence 4689999998842 257999987 7889999999761 122222 33
Q ss_pred cchhhhhccccEEEEeccchhhhccHHHHHHH
Q 002976 542 EGADSAVRKLRCIWISHIHADHHAGLARILAL 573 (861)
Q Consensus 542 ~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~ 573 (861)
+.+|++|+|||.|.||+.|++.|+..
T Consensus 75 ------i~~id~vilTH~H~DHiggl~~l~~~ 100 (547)
T 2bib_A 75 ------VQKLDFILVTHTHSDHIGNVDELLST 100 (547)
T ss_dssp ------CCCBSCEECCCSCHHHHTTHHHHHHH
T ss_pred ------cccccEEEEcCCCccccCCHHHHHHh
Confidence 36799999999999999999998754
No 39
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=99.13 E-value=1.7e-10 Score=121.62 Aligned_cols=86 Identities=20% Similarity=0.245 Sum_probs=60.6
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARIL 571 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll 571 (861)
+.|.++..|.. ...|.++|++|+. ++..+|||||.+...+ + ++ . ..+|++|++||.|.||++|+..+.
T Consensus 4 ~~i~~i~~~~~--g~~~~~~~~li~~-~~~~iLiD~G~~~~~~--~-l~-----~-~~~i~~vi~TH~H~DH~gg~~~l~ 71 (261)
T 3adr_A 4 RGLHSIPAGPV--EFPEIATVYVMCG-EKLTVMIDAGVSNSIA--D-FS-----F-LDKLDYIVLTHLHIDHIGLLPELL 71 (261)
T ss_dssp CEEEEEECSCT--TCGGGSEEEEEEC-SSCEEEECCCCTTCCC--C-CT-----T-CSCCCEEECSCCSGGGTTTHHHHH
T ss_pred CCeEEEeccCC--CCCCceEEEEEEc-CCcEEEEeCCCCCChh--h-cC-----C-CCCCcEEEECCCCccccCCHHHHH
Confidence 46778877622 2246778999953 5789999999875211 0 11 1 478999999999999999999886
Q ss_pred HHHHHhhcCCCCCCeEEEeCchHHHHHH
Q 002976 572 ALRRDLLKGVPHEPLLVVGPGPLKRYLD 599 (861)
Q Consensus 572 ~~~~~~~~g~~~~pl~I~~p~~~~~~L~ 599 (861)
... ...||+++....++.
T Consensus 72 ~~~----------~~~i~~~~~~~~~l~ 89 (261)
T 3adr_A 72 QVY----------KAKVLVKSGFKKYLT 89 (261)
T ss_dssp HHS----------CCEEEEETTCTHHHH
T ss_pred HHh----------CCeEEECHHHHHHhc
Confidence 431 356888876655543
No 40
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=99.08 E-value=4.9e-10 Score=120.25 Aligned_cols=83 Identities=24% Similarity=0.350 Sum_probs=61.8
Q ss_pred EEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcch-----HHHHHHHhCccchhhhhccccEEEEeccchhhhccHH
Q 002976 494 IVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGT-----LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLA 568 (861)
Q Consensus 494 i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt-----~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~ 568 (861)
|.++|.++ ++|++|+. ++..+|||||.+. ..+|.+ .|. .+.+|++|+|||.|.||++|+.
T Consensus 47 v~~~~~~~--------~n~~li~~-~~~~iLID~G~~~~~~~~~~~l~~-~g~-----~~~~i~~ii~TH~H~DH~gg~~ 111 (294)
T 3m8t_A 47 IYYVGTDG--------IAVYVIKT-SQGLILMDTAMPQSTGMIKDNIAK-LGF-----KVADIKLILNTHAHLDHTGGFA 111 (294)
T ss_dssp EEECCCSS--------SCCEEEEE-TTEEEEECCCCGGGHHHHHHHHHH-TTC-----CGGGEEEEECSCCCHHHHTTHH
T ss_pred EEEeCCCC--------eEEEEEEE-CCceEEEECCCchhHHHHHHHHHH-cCC-----CHHHCcEEEECCCCccccccHH
Confidence 66777543 57899987 7789999999752 223332 444 2457999999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHH
Q 002976 569 RILALRRDLLKGVPHEPLLVVGPGPLKRYLDAY 601 (861)
Q Consensus 569 ~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~ 601 (861)
.+.... .+.||+++....++...
T Consensus 112 ~l~~~~----------~~~v~~~~~~~~~~~~~ 134 (294)
T 3m8t_A 112 EIKKET----------GAQLVAGERDKPLLEGG 134 (294)
T ss_dssp HHHHHH----------CCEEEEEGGGHHHHHHT
T ss_pred HHhhcc----------CCEEEEChHHHHHHhcc
Confidence 886532 36799999888877654
No 41
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=99.02 E-value=1.6e-09 Score=114.36 Aligned_cols=76 Identities=18% Similarity=0.243 Sum_probs=56.0
Q ss_pred CccEEEEEEeCCceEEEeCCcc-hHHHHHH---HhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCC
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEG-TLGQLKR---RYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHE 584 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGeg-t~~qL~r---~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~ 584 (861)
+++|++|+. ++..+|||||.+ ...++.+ ..|. .+.+|++|+|||.|.||++|+..+....
T Consensus 24 ~~n~~li~~-~~~~iLID~G~~~~~~~l~~~l~~~g~-----~~~~i~~IilTH~H~DH~gg~~~l~~~~---------- 87 (263)
T 1k07_A 24 DLASYLIVT-PRGNILINSDLEANVPMIKASIKKLGF-----KFSDTKILLISHAHFDHAAGSELIKQQT---------- 87 (263)
T ss_dssp SBCCEEEEE-TTEEEEECCCCGGGHHHHHHHHHHTTC-----CGGGEEEEECSSSSHHHHTTHHHHHHHH----------
T ss_pred CeEEEEEEe-CCceEEEECCCcccHHHHHHHHHHcCC-----CHHHCcEEEeCCCCccccccHHHHHHhc----------
Confidence 367999987 678999999986 2222222 2443 2457999999999999999999886531
Q ss_pred CeEEEeCchHHHHHHH
Q 002976 585 PLLVVGPGPLKRYLDA 600 (861)
Q Consensus 585 pl~I~~p~~~~~~L~~ 600 (861)
.+.||+++....++..
T Consensus 88 ~~~v~~~~~~~~~~~~ 103 (263)
T 1k07_A 88 KAKYMVMDEDVSVILS 103 (263)
T ss_dssp CCEEEEEHHHHHHHHT
T ss_pred CCEEEEcHHHHHHHhc
Confidence 3579999888777654
No 42
>2az4_A Hypothetical protein EF2904; structural genomics, PSI, protein STR initiative, midwest center for structural genomics, MCSG, U function; 2.00A {Enterococcus faecalis} SCOP: d.157.1.10
Probab=99.02 E-value=4.7e-10 Score=127.37 Aligned_cols=145 Identities=9% Similarity=0.101 Sum_probs=93.2
Q ss_pred eeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHH----------HHHHc---------------------CCCcC
Q 002976 43 LSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQR----------FCTEH---------------------KIKLS 91 (861)
Q Consensus 43 ~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr----------~l~~~---------------------~i~~~ 91 (861)
+|+|+|||+++.. .++|++|..++..+|||||.+.+. .+... +....
T Consensus 6 ~m~i~~lG~~~~~--g~n~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~ 83 (429)
T 2az4_A 6 KTTVTFHSGILTI--GGTVIEVAYKDAHIFFDFGTEFRPELDLPDDHIETLINNRLVPELKDLYDPRLGYEYHGAEDKDY 83 (429)
T ss_dssp CEEEEEEECTTSS--SCCEEEEEETTEEEEECCCCCCCTTCCCSCCCHHHHHHTTSSCCCSSCBCGGGCCCCCSSCCCCC
T ss_pred ceEEEEeeCCCcc--CCeEEEEEECCeEEEEecCCCCCcccCCCcchhhhccCCcccCCchhhhcccccccchhhhhccc
Confidence 3899999987533 257999999999999999988631 12221 34556
Q ss_pred CCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCcc
Q 002976 92 KVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAK 171 (861)
Q Consensus 92 ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (861)
++++|||||.|+||++||+.++. .+.||+++....++....... ..+.. ...... .....+.
T Consensus 84 ~i~~v~lTH~H~DHiggl~~l~~----------~~~iy~~~~~~~~~~~~~~~~--~~~~~-~~~~~~-~~~~~~~---- 145 (429)
T 2az4_A 84 QHTAVFLSHAHLDHSRMINYLDP----------AVPLYTLKETKMILNSLNRKG--DFLIP-SPFEEK-NFTREMI---- 145 (429)
T ss_dssp SEEEEECSCSCHHHHTTGGGBCT----------TSCEEEEHHHHHHHHHHTTTS--CSSCC-CTTSCT-TCCCCCE----
T ss_pred cCCEEEECCchHHHhCcHhHhcC----------CCCEEECHHHHHHHHHHHHhC--ccccc-cccccc-cccceEE----
Confidence 88999999999999999987641 245999998888776533211 00000 000000 0000000
Q ss_pred CCCceeEeeCCcEEEEEEEcCCCCCCCCCCCCCCCeeEEEEEeCC
Q 002976 172 SANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPE 216 (861)
Q Consensus 172 ~~~~~~~~~d~~i~V~~~~l~h~~~~~~~~~~~~~s~gY~~~~~~ 216 (861)
....+..++.++++|+++++.|.. ..++||+++.++
T Consensus 146 ~~~~g~~~~~g~~~v~~~~~~H~~---------~gs~~~~i~~~~ 181 (429)
T 2az4_A 146 GLNKNDVIKVGEISVEIVPVDHDA---------YGASALLIRTPD 181 (429)
T ss_dssp EECTTCEEEETTEEEEEEECCCSS---------TTCEEEEEEETT
T ss_pred EeCCCCeEEECCEEEEEEECCCCC---------hhhEEEEEEeCC
Confidence 112334556678999999999953 248999998653
No 43
>3bk2_A RNAse J, metal dependent hydrolase; endoribonuclease, exoribonuclease, metallo-beta-lactamase; HET: U5P; 2.10A {Thermus thermophilus} PDB: 3bk1_A* 3t3o_A* 3t3n_A*
Probab=98.98 E-value=5.8e-10 Score=130.54 Aligned_cols=142 Identities=14% Similarity=0.115 Sum_probs=96.0
Q ss_pred CCeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHH--------------HHHHHcCCCcCCCCEEEECcCCcCcc
Q 002976 41 NTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQ--------------RFCTEHKIKLSKVDHIFLSRVCSETA 106 (861)
Q Consensus 41 ~~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtq--------------r~l~~~~i~~~ki~~IFiTH~H~DHi 106 (861)
+..|++++||+++.. .++|++|..++..+|||||.++. +.+. ....++++|||||.|.||+
T Consensus 14 ~~~~~i~~LGg~~ei--g~n~~li~~~~~~iLID~G~~~~~~~~~g~~~~~p~~~~l~---~~~~~Id~I~iTH~H~DHi 88 (562)
T 3bk2_A 14 QDHVEIIPLGGMGEI--GKNITVFRFRDEIFVLDGGLAFPEEGMPGVDLLIPRVDYLI---EHRHKIKAWVLTHGHEDHI 88 (562)
T ss_dssp CCCEEEEEEESBSBS--SCCEEEEEETTEEEEECCCCBCCCTTSTTCCEEEECCHHHH---HTGGGEEEEECCCCCHHHH
T ss_pred CCcEEEEEecCCCCc--CCCEEEEEECCeEEEEECCCCCCccccccccccccchhhhh---cCcccCcEEEECCCChHHh
Confidence 345899999975422 45799999999999999996421 1121 2356799999999999999
Q ss_pred CcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCc-eeeeeecCCCCCCCCcCCCCccCCCceeEeeCCc-E
Q 002976 107 GGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAA-MVHTHCFGPAPSSDASLPDSAKSANHIILVDNEL-A 184 (861)
Q Consensus 107 ~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-i 184 (861)
+||+.++..+.. ...++.||+++.+..++........... ...... ...+..++.+. +
T Consensus 89 ggl~~L~~~~~~---~~~~~pIy~~~~t~~~l~~~l~~~~~~~~~~~~~~-----------------v~~g~~~~lg~~~ 148 (562)
T 3bk2_A 89 GGLPFLLPMIFG---KESPVPIYGARLTLGLLRGKLEEFGLRPGAFNLKE-----------------ISPDDRIQVGRYF 148 (562)
T ss_dssp TTHHHHHHHHHC---SCCCSEEEEEHHHHHHHHHHHHHTTCCSTTSEEEE-----------------ECTTCEEEETTTE
T ss_pred CCHHHHHHhhcc---ccCCceEEeCHHHHHHHHHHHHHcCCCcCCceEEE-----------------ECCCCEEEeCCCE
Confidence 999999876531 1124679999998887766543211000 000111 12233455667 9
Q ss_pred EEEEEEcCCCCCCCCCCCCCCCeeEEEEEeCC
Q 002976 185 KISAILLKPSCSDGSPVKPGETSVIYVCELPE 216 (861)
Q Consensus 185 ~V~~~~l~h~~~~~~~~~~~~~s~gY~~~~~~ 216 (861)
+|+++++.|.. ..++||.|+.++
T Consensus 149 ~v~~~~~~H~~---------~gs~~~~i~~~~ 171 (562)
T 3bk2_A 149 TLDLFRMTHSI---------PDNSGVVIRTPI 171 (562)
T ss_dssp EEEEEECCCSS---------SSCEEEEEEETT
T ss_pred EEEEEECCCCC---------cccEEEEEEECC
Confidence 99999999953 358999997653
No 44
>3iek_A Ribonuclease TTHA0252; metallo beta lactamase fold, endonuclease, hydrolase, metal- nuclease, RNA-binding, rRNA processing; HET: FLC; 2.05A {Thermus thermophilus} SCOP: d.157.1.10 PDB: 2dkf_A* 3iel_A* 3iem_A* 2zdf_A* 3idz_A* 2zdd_A* 3ie0_A* 2zde_A* 3ie1_A* 2zdw_A* 3a4y_A* 2yvd_A* 3ie2_A*
Probab=98.93 E-value=7.8e-10 Score=125.26 Aligned_cols=145 Identities=14% Similarity=0.138 Sum_probs=91.2
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcCh--hHH--HHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhcc
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGE--GLQ--RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGI 119 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~Ge--Gtq--r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~ 119 (861)
|+|++||+++.. +++|++|..++.++|||||. |.. +.+...++.+.+|++|||||.|+||++|||.++..
T Consensus 1 M~i~~LG~~~~v--g~s~~li~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~Id~VllTH~H~DH~gglp~l~~~---- 74 (431)
T 3iek_A 1 MRIVPFGAAREV--TGSAHLLLAGGRRVLLDCGMFQGKEEARNHAPFGFDPKEVDAVLLTHAHLDHVGRLPKLFRE---- 74 (431)
T ss_dssp CEEEECSCSSSS--SCCCEEEEETTEEEEECCCCCCGGGGGGGGSCCSSCGGGCCEEECSCCCHHHHTTHHHHHHT----
T ss_pred CEEEEeCCCCCC--CCcEEEEEECCeEEEEeCCCCcchhhccchhhcCCCcccCCEEEECCCChHHhccHHHHHHc----
Confidence 689999987543 35799999999999999997 321 11223456677899999999999999999998742
Q ss_pred CCCCCcEEEEcCccHHHHHHHHHhhc---ccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcCCCCC
Q 002976 120 GDEGLSVNVWGPSDLKYLVDAMKSFI---PHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLKPSCS 196 (861)
Q Consensus 120 ~~~~~~l~IyGP~gl~~~l~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~h~~~ 196 (861)
+ ....||+++.+..++.....-. .....+....+.. .. ..+. ....+..++.++++|++++..|..
T Consensus 75 ~---~~~~Iy~t~~t~~l~~~~l~d~~~~~~~~~y~~~~~~~--~~-~~~~----~l~~~~~~~l~g~~v~~~~agH~~- 143 (431)
T 3iek_A 75 G---YRGPVYATRATVLLMEIVLEDALKVMDEPFFGPEDVEE--AL-GHLR----PLEYGEWLRLGALSLAFGQAGHLP- 143 (431)
T ss_dssp T---CCSCEEECHHHHHHHHHHHHHHHHHCSSCSSCHHHHHH--HH-HTEE----ECCTTCCEEETTEEEEEEECCSST-
T ss_pred C---CCCeEEEcHHHHHHHHHHHHHHHhhcccCCCCHHHHHH--HH-hccE----EcCCCCeEEeCCEEEEEEeCCCCc-
Confidence 1 1244999998887776543211 0000000000000 00 0000 011122333478999999999964
Q ss_pred CCCCCCCCCCeeEEEEEe
Q 002976 197 DGSPVKPGETSVIYVCEL 214 (861)
Q Consensus 197 ~~~~~~~~~~s~gY~~~~ 214 (861)
.+++|.++.
T Consensus 144 ---------Gs~~~~i~~ 152 (431)
T 3iek_A 144 ---------GSAFVVAQG 152 (431)
T ss_dssp ---------TCEEEEEEE
T ss_pred ---------CceEEEEEE
Confidence 788999873
No 45
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=98.91 E-value=8.8e-09 Score=104.50 Aligned_cols=87 Identities=17% Similarity=0.200 Sum_probs=61.9
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARIL 571 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll 571 (861)
|+|.++..|. ..++|++|+. ++..+|||||.+. .++.+.+. +.-.+|++|++||.|.||+.|+..+.
T Consensus 1 M~i~~~~~g~------~~~n~~li~~-~~~~iliD~G~~~-~~l~~~l~-----~~g~~i~~vilTH~H~DH~gg~~~l~ 67 (207)
T 2zwr_A 1 MRVFPVTLGP------LQENAYLVET-GEGPVLIDPGDEP-EKLLALFQ-----TTGLIPLAILLTHAHFDHVGAVAPLV 67 (207)
T ss_dssp CEEEEEEETT------TTEEEEEEEE-TTEEEEECCCSCH-HHHHHHHH-----HHTCCCSCEECSCCCGGGTTTHHHHH
T ss_pred CeEEEEecCC------cccEEEEEEe-CCcEEEEeCCCCH-HHHHHHHH-----HcCCcccEEEECCCChHHHccHHHHH
Confidence 6788888764 2468999987 6789999999764 33332111 00125899999999999999999885
Q ss_pred HHHHHhhcCCCCCCeEEEeCchHHHHHHHH
Q 002976 572 ALRRDLLKGVPHEPLLVVGPGPLKRYLDAY 601 (861)
Q Consensus 572 ~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~ 601 (861)
... ...||+++...+++...
T Consensus 68 ~~~----------~~~v~~~~~~~~~~~~~ 87 (207)
T 2zwr_A 68 EAL----------DLPVYLHPLDLPLYEGA 87 (207)
T ss_dssp HHH----------CCCEEECGGGHHHHHTH
T ss_pred HHh----------CCcEEECHHHHHHHhCc
Confidence 431 24689999888777543
No 46
>2i7t_A Cleavage and polyadenylation specificity factor 73 kDa subunit; metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination; 2.10A {Homo sapiens} SCOP: d.157.1.10 PDB: 2i7v_A
Probab=98.89 E-value=1.8e-09 Score=123.57 Aligned_cols=93 Identities=15% Similarity=0.239 Sum_probs=68.3
Q ss_pred CCeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHH----HHHH-HcCCCcCCCCEEEECcCCcCccCcHHHHHHH
Q 002976 41 NTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQ----RFCT-EHKIKLSKVDHIFLSRVCSETAGGLPGLLLT 115 (861)
Q Consensus 41 ~~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtq----r~l~-~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t 115 (861)
+..|+|++||+++.. +++|++|+.++.++|||||.+.. +.+. ..++.+.+|++|||||.|+||++||+.++..
T Consensus 9 ~~~m~i~~LG~~~~v--g~s~~li~~~~~~iLID~G~~~~~~~~~~~~~l~~~~~~~Id~VllTH~H~DH~ggl~~l~~~ 86 (459)
T 2i7t_A 9 SDQLLIRPLGAGQEV--GRSCIILEFKGRKIMLDCGIHPGLEGMDALPYIDLIDPAEIDLLLISHFHLDHCGALPWFLQK 86 (459)
T ss_dssp CEEEEEEEEESSSSS--SSCEEEEEETTEEEEECCCCCTTSCGGGGSCCGGGSCGGGCCEEECCCSSHHHHTTHHHHHHH
T ss_pred CCeEEEEEEecCCCC--CCCEEEEEECCeEEEEeCCCCcCcccccccCcccccCcccCcEEEECCCChhhhhhhHHHHHh
Confidence 345999999998633 46799999999999999997421 1110 1245677899999999999999999988754
Q ss_pred HhccCCCCCcEEEEcCccHHHHHHHH
Q 002976 116 LAGIGDEGLSVNVWGPSDLKYLVDAM 141 (861)
Q Consensus 116 ~~~~~~~~~~l~IyGP~gl~~~l~~~ 141 (861)
... +..||+++.+..++..+
T Consensus 87 ~~~------~~~iy~t~~t~~l~~~~ 106 (459)
T 2i7t_A 87 TSF------KGRTFMTHATKAIYRWL 106 (459)
T ss_dssp SSC------CSEEEEEHHHHHHHHHH
T ss_pred cCC------CCCEEechHHHHHHHHH
Confidence 321 24589988776665543
No 47
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=98.88 E-value=1e-09 Score=119.99 Aligned_cols=97 Identities=26% Similarity=0.335 Sum_probs=66.9
Q ss_pred CCCccEEEEEecCCC-CC---------------------CCC--CCccEEEEEEeCCceEEEeCCcc---------hHHH
Q 002976 488 RRDDLEIVLLGTGSS-QP---------------------SKY--RNVSSIYVNLFSKGSLLLDCGEG---------TLGQ 534 (861)
Q Consensus 488 ~~~~~~i~fLGTGsa-~P---------------------s~~--Rn~Ss~ll~~~~~~~iLlDcGeg---------t~~q 534 (861)
.-++|+|++|++|.. +| ... -.++|++|+. ++..||||||.+ ...+
T Consensus 51 ~~g~~~vt~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~LI~~-~~~~iLIDtG~~~~~~~~~~~l~~~ 129 (331)
T 1p9e_A 51 LLGDFEITALSDGTVALPVDKRLNQPAPKTQSALAKSFQKAPLETSVTGYLVNT-GSKLVLVDTGAAGLFGPTLGRLAAN 129 (331)
T ss_dssp EETTEEEEEEEEEEEEECHHHHBSSCHHHHHHHHHHTTCCSSEEEEEEEEEEEC-SSCEEEECCCCTTSSCTTCCCHHHH
T ss_pred EECCEEEEEEeCCCEeCCHHHcCCCCHHHHHHhhhhccCCCceEEEEEEEEEEE-CCEEEEEECCCCCcCCcchhHHHHH
Confidence 346899999998853 21 111 1135888886 678999999987 4445
Q ss_pred HHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHH
Q 002976 535 LKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLD 599 (861)
Q Consensus 535 L~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~ 599 (861)
|.+ .|.+ +.+|++|+|||.|.||++|+..++.. ..+...||+++...+++.
T Consensus 130 L~~-~Gi~-----~~~Id~VilTH~H~DHiggl~~~~~~--------~fp~a~v~~~~~~~~~~~ 180 (331)
T 1p9e_A 130 LKA-AGYQ-----PEQVDEIYITHMHPDHVGGLMVGEQL--------AFPNAVVRADQKEADFWL 180 (331)
T ss_dssp HHH-TTCC-----GGGCCEEECSCCCHHHHGGGEETTEE--------SSTTCEEECBHHHHHHHS
T ss_pred HHH-cCCC-----HHHCCEEEeCCcccccCCcccccccc--------cCCCCEEEECHHHHHHHh
Confidence 554 6652 56899999999999999998633110 113468999888766553
No 48
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=98.87 E-value=1e-08 Score=108.52 Aligned_cols=76 Identities=29% Similarity=0.383 Sum_probs=56.0
Q ss_pred CccEEEEEEeCCceEEEeCCcch-HHHHHH---HhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCC
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEGT-LGQLKR---RYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHE 584 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGegt-~~qL~r---~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~ 584 (861)
+++|++|+. ++..+|||||.+. ...+.+ ..|. ...+|++|+|||.|.||++|+..+... .
T Consensus 37 ~~~~~li~~-~~~~iLID~G~~~~~~~l~~~l~~~g~-----~~~~i~~IilTH~H~DH~gg~~~l~~~----------~ 100 (269)
T 1sml_A 37 DLTALLVQT-PDGAVLLDGGMPQMASHLLDNMKARGV-----TPRDLRLILLSHAHADHAGPVAELKRR----------T 100 (269)
T ss_dssp TBCCEEEEE-TTEEEEECCBSGGGHHHHHHHHHHTTC-----CGGGEEEEECSCCSHHHHTTHHHHHHH----------S
T ss_pred CcEEEEEEe-CCceEEEECCCCccHHHHHHHHHHcCC-----ChHHCcEEEeCCCCccccCCHHHHHHh----------c
Confidence 468999987 6789999999762 222222 2444 245899999999999999999988643 1
Q ss_pred CeEEEeCchHHHHHHH
Q 002976 585 PLLVVGPGPLKRYLDA 600 (861)
Q Consensus 585 pl~I~~p~~~~~~L~~ 600 (861)
.+.||+++....++..
T Consensus 101 ~~~v~~~~~~~~~l~~ 116 (269)
T 1sml_A 101 GAKVAANAESAVLLAR 116 (269)
T ss_dssp SCEEEECHHHHHHHHT
T ss_pred CCeEEECHHHHHHHhc
Confidence 3679999888776653
No 49
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=98.86 E-value=1.5e-08 Score=108.97 Aligned_cols=89 Identities=17% Similarity=0.125 Sum_probs=59.9
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEe-CCceEEEeCCcc-----------hHHHHHH---HhCccchhhhhccccEE
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLF-SKGSLLLDCGEG-----------TLGQLKR---RYGVEGADSAVRKLRCI 554 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~-~~~~iLlDcGeg-----------t~~qL~r---~~g~~~~~~~l~~i~~I 554 (861)
.+|+|..+-.++. .+.|++|... ++..+|||||.+ ...++.+ ..| .+|++|
T Consensus 3 g~m~i~~~~~~~~------~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g--------~~i~~I 68 (298)
T 4efz_A 3 GSMTVEGFFDPAT------CTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALG--------ARVRWL 68 (298)
T ss_dssp CSCEEEEEECTTT------CBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHT--------CEEEEE
T ss_pred CceEEEEEecCCc------ccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCC--------CcceEE
Confidence 4577776655442 2578888642 346899999963 2233332 233 259999
Q ss_pred EEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEEeCchHHHHHHHHH
Q 002976 555 WISHIHADHHAGLARILALRRDLLKGVPHEPLLVVGPGPLKRYLDAYE 602 (861)
Q Consensus 555 fISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~~~~~L~~~~ 602 (861)
++||.|+||+.|+..|.... ...||+++....+++.+.
T Consensus 69 l~TH~H~DH~gg~~~l~~~~----------~a~i~~~~~~~~~~~~~~ 106 (298)
T 4efz_A 69 LETHVHADHLSAAPYLKTRV----------GGEIAIGRHVTRVQDVFG 106 (298)
T ss_dssp ECSSCCSSSBCCHHHHHHHH----------CCEEEEETTHHHHHHHHH
T ss_pred EECCCchhhhhhHHHHHHHh----------CCcEEEChhHHHHHHHHH
Confidence 99999999999999886542 246788877776666553
No 50
>3zq4_A Ribonuclease J 1, RNAse J1; hydrolase, RNA maturation; 3.00A {Bacillus subtilis}
Probab=98.85 E-value=4.4e-09 Score=122.52 Aligned_cols=138 Identities=17% Similarity=0.116 Sum_probs=91.9
Q ss_pred eeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHHH-----------HHHcCCCcCCCCEEEECcCCcCccCcHHH
Q 002976 43 LSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRF-----------CTEHKIKLSKVDHIFLSRVCSETAGGLPG 111 (861)
Q Consensus 43 ~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr~-----------l~~~~i~~~ki~~IFiTH~H~DHi~GLpg 111 (861)
.+++.+||..+.. ..+|++|..++..+|||||.+++.. +...+....++++|||||.|+||++||+.
T Consensus 8 ~i~i~~lGg~~ei--G~n~~li~~~~~~iLID~G~~~~~~~~~g~d~iip~~~~l~~~~~~Id~I~lTH~H~DHiggl~~ 85 (555)
T 3zq4_A 8 QTAVFALGGLGEI--GKNTYAVQFQDEIVLIDAGIKFPEDELLGIDYVIPDYTYLVKNEDKIKGLFITHGHEDHIGGIPY 85 (555)
T ss_dssp SEEEEEEESBSSS--SCCEEEEEETTEEEEEEECCBCCCTTSTTCSEEEECCHHHHTTTTTEEEEEESCCCHHHHTTHHH
T ss_pred cEEEEEcCCCCcc--CCEEEEEEECCeEEEEeCCCCCCccccccccccccCHHHHhcCccCCCEEEECCCchhhhCCHHH
Confidence 4888899864322 3579999999999999999754210 11112245689999999999999999998
Q ss_pred HHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEc
Q 002976 112 LLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILL 191 (861)
Q Consensus 112 ll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l 191 (861)
++..+ .+.||+++....++................. ...+..++.++++|+.+++
T Consensus 86 l~~~~--------~~pIy~t~~t~~ll~~~l~~~~~~~~~~~~~-----------------v~~g~~~~ig~~~v~~~~~ 140 (555)
T 3zq4_A 86 LLRQV--------NIPVYGGKLAIGLLRNKLEEHGLLRQTKLNI-----------------IGEDDIVKFRKTAVSFFRT 140 (555)
T ss_dssp HHTTC--------CCCEEECHHHHHHHHHHHHHHSTTTTCCEEE-----------------CCTTCCEEETTEEEEEEEE
T ss_pred HHHhc--------CceEEECHHHHHHHHHHHHHcCccCCCceEE-----------------eCCCCEEEECCEEEEEEeC
Confidence 87321 2459999988887776543211000000111 1223345557899999999
Q ss_pred CCCCCCCCCCCCCCCeeEEEEEeCC
Q 002976 192 KPSCSDGSPVKPGETSVIYVCELPE 216 (861)
Q Consensus 192 ~h~~~~~~~~~~~~~s~gY~~~~~~ 216 (861)
.|.. ..+++|.++.++
T Consensus 141 ~H~~---------pgs~~~~i~~~~ 156 (555)
T 3zq4_A 141 THSI---------PDSYGIVVKTPP 156 (555)
T ss_dssp BCSS---------SSEEEEEEEETT
T ss_pred CCCC---------cCcEEEEEEECC
Confidence 9953 368999998653
No 51
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=98.83 E-value=6.4e-09 Score=106.39 Aligned_cols=75 Identities=16% Similarity=0.222 Sum_probs=54.7
Q ss_pred ccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~ 587 (861)
++|++|+. ++..+|||||.+. ..++.+.+.. ..-.+|++|++||.|.||++|+..+.. ..+.
T Consensus 31 ~n~~li~~-~~~~iLiD~G~~~~~~~~~~~~l~~----~~~~~i~~ii~TH~H~DH~gg~~~l~~-----------~~~~ 94 (219)
T 3l6n_A 31 ANSMYLVT-KKGVVLFDVPWEKVQYQSLMDTIKK----RHNLPVVAVFATHSHDDRAGDLSFFNN-----------KGIK 94 (219)
T ss_dssp EEEEEEEE-TTEEEEESCCSSGGGHHHHHHHHHH----HHSCCEEEEECSSSSTTTTCCTHHHHH-----------TTCE
T ss_pred ceEEEEEe-CCEEEEEeCCCChHHHHHHHHHHHH----hcCCceeEEEecCCCcccccCHHHHHh-----------CCCE
Confidence 57888987 7889999999652 2333332221 012579999999999999999998842 1367
Q ss_pred EEeCchHHHHHHH
Q 002976 588 VVGPGPLKRYLDA 600 (861)
Q Consensus 588 I~~p~~~~~~L~~ 600 (861)
||+++...+++..
T Consensus 95 v~~~~~~~~~~~~ 107 (219)
T 3l6n_A 95 TYATAKTNEFLKK 107 (219)
T ss_dssp EEECHHHHHHHHH
T ss_pred EEEcHHHHHHHHh
Confidence 9999988877764
No 52
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.83 E-value=9.1e-09 Score=115.59 Aligned_cols=78 Identities=15% Similarity=0.249 Sum_probs=56.3
Q ss_pred ccEEEEEEeCCceEEEeCCcch-HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT-LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLV 588 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt-~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I 588 (861)
.+|++|+ ++..+|||||.+. ..++.+.+.. . ....+|++|+|||.|.||+.|+..+.... +...|
T Consensus 35 ~n~~li~--~~~~iliD~G~~~~~~~~~~~l~~--~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~---------~~~~v 100 (402)
T 1e5d_A 35 YNAYLVE--DEKTTLFDTVKAEYKGELLCGIAS--V-IDPKKIDYLVIQHLELDHAGALPALIEAC---------QPEKI 100 (402)
T ss_dssp EEEEEEC--SSSCEEECCCCGGGHHHHHHHHHT--T-SCGGGCCEEEECCCSHHHHTTHHHHHHHH---------CCSEE
T ss_pred eEEEEEE--CCCEEEEeCCCCccHHHHHHHHHH--h-CCcccCCEEEeCCCCccccccHHHHHHHC---------CCCEE
Confidence 5688887 4579999999873 3333332111 0 01478999999999999999999886542 24789
Q ss_pred EeCchHHHHHHHH
Q 002976 589 VGPGPLKRYLDAY 601 (861)
Q Consensus 589 ~~p~~~~~~L~~~ 601 (861)
|+++....++..+
T Consensus 101 ~~~~~~~~~~~~~ 113 (402)
T 1e5d_A 101 FTSSLGQKAMESH 113 (402)
T ss_dssp EEEHHHHHHHHHH
T ss_pred EEChHHHHHHHHH
Confidence 9999888877654
No 53
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=98.83 E-value=1.1e-08 Score=103.92 Aligned_cols=74 Identities=18% Similarity=0.216 Sum_probs=50.9
Q ss_pred ccEEEEEE-eCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEE
Q 002976 510 VSSIYVNL-FSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLV 588 (861)
Q Consensus 510 ~Ss~ll~~-~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I 588 (861)
++|++|+. .++..+|||||.+. .++.+.+.. .-.++++|++||.|.||+.|+..+.... ++.|
T Consensus 13 ~n~~li~~~~~~~~iLiD~G~~~-~~l~~~l~~-----~g~~i~~ii~TH~H~DH~gg~~~l~~~~----------~~~v 76 (210)
T 2xf4_A 13 QNCSLIWCEQTRLAALVDPGGDA-EKIKQEVDA-----SGVTLMQILLTHGHLDHVGAASELAQHY----------GVPV 76 (210)
T ss_dssp EEEEEEECTTTCEEEEECCCSCH-HHHHHHHHH-----HTCEEEEEECSCSCHHHHTTHHHHHHHH----------TCCE
T ss_pred cEEEEEEecCCCcEEEEcCCCCH-HHHHHHHHH-----cCCceeEEEECCCChhhhcCHHHHHHHc----------CCcE
Confidence 67899974 25678999999653 333332110 0125899999999999999999886542 2458
Q ss_pred EeCchHHHHHH
Q 002976 589 VGPGPLKRYLD 599 (861)
Q Consensus 589 ~~p~~~~~~L~ 599 (861)
|+++...+++.
T Consensus 77 ~~~~~~~~~~~ 87 (210)
T 2xf4_A 77 IGPEKEDEFWL 87 (210)
T ss_dssp ECCCGGGHHHH
T ss_pred EEecchHHHHh
Confidence 88877665553
No 54
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=98.79 E-value=5.1e-09 Score=111.62 Aligned_cols=76 Identities=21% Similarity=0.348 Sum_probs=53.3
Q ss_pred ccEEEEEEeCCceEEEeCCcch-------------------HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHH
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT-------------------LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARI 570 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt-------------------~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~l 570 (861)
++|++|+. ++..||||||.+. ..+|. ..|. .+.+|++|+|||.|.||++|+..+
T Consensus 48 ~n~~lI~~-~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~-~~g~-----~~~~Id~IllTH~H~DHigg~~~l 120 (280)
T 3esh_A 48 THPILIQT-AQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLA-NYNL-----TPKDIDYVLMTHMHFDHAAGLTDQ 120 (280)
T ss_dssp CCCEEEEC-SSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHH-TTTC-----CTTSCCEEECSCCCHHHHGGGSCT
T ss_pred EEEEEEEE-CCEEEEEECCCCCcccccccccccCCcccchHHHHHH-HcCC-----CHHHCCEEEeCCCcccccCccccc
Confidence 47889987 7789999999764 12222 2343 245899999999999999999876
Q ss_pred HHHHHHhhcCCCCCCeEEEeCchHHHHHH
Q 002976 571 LALRRDLLKGVPHEPLLVVGPGPLKRYLD 599 (861)
Q Consensus 571 l~~~~~~~~g~~~~pl~I~~p~~~~~~L~ 599 (861)
... ..-+...||+++....++.
T Consensus 121 ~~~-------~~fp~a~i~~~~~~~~~~~ 142 (280)
T 3esh_A 121 AGH-------AIFENAIHVVQQDEWHEFI 142 (280)
T ss_dssp TSC-------CSSTTCEEEEEHHHHHHHH
T ss_pred ccc-------cCCCCCEEEECHHHHHHhh
Confidence 321 0113577898887766654
No 55
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.79 E-value=1.4e-08 Score=113.98 Aligned_cols=78 Identities=17% Similarity=0.146 Sum_probs=54.6
Q ss_pred ccEEEEEEeCCceEEEeCCcch-HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT-LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLV 588 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt-~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I 588 (861)
.+|++|+ +++.+|||||.+. ..++.+.+.. . -...+|++|+|||.|.||+.|+..+.... +.+.|
T Consensus 36 ~n~~li~--~~~~iliD~g~~~~~~~~~~~l~~--~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~---------~~~~v 101 (398)
T 1ycg_A 36 YNAYLIV--DDKTALVDTVYEPFKEELIAKLKQ--I-KDPVKLDYLVVNHTESDHAGAFPAIMELC---------PDAHV 101 (398)
T ss_dssp ECCEEEC--SSSCEEECCCCGGGHHHHHHHHHH--H-CSSCCCSEEEESCCSHHHHTTHHHHHHHC---------TTCEE
T ss_pred EEEEEEE--CCCEEEEeCCCcccHHHHHHHHHH--h-cCcccCCEEEeCCCCcchhhhHHHHHHHC---------CCCEE
Confidence 4678886 3469999999872 2222221100 0 01478999999999999999999886531 34789
Q ss_pred EeCchHHHHHHHH
Q 002976 589 VGPGPLKRYLDAY 601 (861)
Q Consensus 589 ~~p~~~~~~L~~~ 601 (861)
|+++....++..+
T Consensus 102 ~~~~~~~~~l~~~ 114 (398)
T 1ycg_A 102 LCTQRAFDSLKAH 114 (398)
T ss_dssp EECHHHHHHHHHH
T ss_pred EEcHHHHHHHHHH
Confidence 9999888877654
No 56
>2ycb_A Beta-CAsp RNAse, cleavage and polyadenylation specificity factor; hydrolase, KH, metallo-beta-lactamase; 3.10A {Methanothermobacter thermautotrophicusorganism_taxid}
Probab=98.78 E-value=1.2e-08 Score=121.11 Aligned_cols=92 Identities=16% Similarity=0.239 Sum_probs=68.6
Q ss_pred CCeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHH-----HHHHHc---CCCcCCCCEEEECcCCcCccCcHHHH
Q 002976 41 NTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQ-----RFCTEH---KIKLSKVDHIFLSRVCSETAGGLPGL 112 (861)
Q Consensus 41 ~~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtq-----r~l~~~---~i~~~ki~~IFiTH~H~DHi~GLpgl 112 (861)
...|++++||+++.. .++|++|..++.++|||||.+.. ..+... +..+.+|++|||||.|+||++||+.+
T Consensus 177 ~~~m~i~~LG~~~ev--g~s~~lI~~~~~~ILID~G~~~~~~~~~~~~~~l~~l~~~~~~Id~VlLTH~H~DHiGglp~L 254 (636)
T 2ycb_A 177 NDWARLTAMGGFREV--GRSCLYLQTPNSRVLLDCGVNVAGGDDKNSYPYLNVPEFTLDSLDAVIITHAHLDHSGFLPYL 254 (636)
T ss_dssp CCCCEEEEEESSSSS--SCCEEEEECSSCEEEEEECCCCSSCCHHHHSCCTTSTTCCTTTCCEEECSSSSHHHHTTHHHH
T ss_pred CCeEEEEEEecCCCC--CCCEEEEEECCeEEEEeCCCCcccccchhhccccccccCCcccCcEEEECCCChHHhcCHHHH
Confidence 345899999987532 35799999999999999998742 122111 35677899999999999999999988
Q ss_pred HHHHhccCCCCCcEEEEcCccHHHHHHHH
Q 002976 113 LLTLAGIGDEGLSVNVWGPSDLKYLVDAM 141 (861)
Q Consensus 113 l~t~~~~~~~~~~l~IyGP~gl~~~l~~~ 141 (861)
+.. + . ...||+++....++...
T Consensus 255 ~~~----~-~--~~~Iy~t~~t~~l~~~~ 276 (636)
T 2ycb_A 255 YHY----G-Y--DGPVYCTAPTRDLMTLL 276 (636)
T ss_dssp HHT----T-C--CSCEEECHHHHHHHHHH
T ss_pred Hhc----C-C--CCeEEEcchHHHHHHHH
Confidence 742 1 1 24599999887766543
No 57
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.78 E-value=1.4e-08 Score=114.06 Aligned_cols=80 Identities=16% Similarity=0.090 Sum_probs=55.1
Q ss_pred ccEEEEEEeCCceEEEeCCcch-HHHHHHHhCccchh--hhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCe
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT-LGQLKRRYGVEGAD--SAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPL 586 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt-~~qL~r~~g~~~~~--~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl 586 (861)
.+|++|+. ++..+|||||.+. ..++.+.+.. .. ....+|++|++||.|.||+.|+..+.... +..
T Consensus 35 ~n~~li~~-~~~~iLiD~g~~~~~~~~~~~l~~--~~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~---------p~~ 102 (404)
T 2ohh_A 35 YNAYLVCG-DEGVALIDNSYPGTFDELMARVED--ALQQVGMERVDYIIQNHVEKDHSGVLVELHRRF---------PEA 102 (404)
T ss_dssp ECCEEEEC-SSCEEEECCCCTTCHHHHHHHHHH--HHHHHTCCCCCEEECSCCSHHHHTTHHHHHHHS---------TTC
T ss_pred EEEEEEEe-CCcEEEEeCCCCccHHHHHHHHHH--HhccCCccCCCEEEeCCCCCcccchHHHHHHHC---------CCC
Confidence 46888875 6679999999872 2222221110 00 01368999999999999999999886531 236
Q ss_pred EEEeCchHHHHHHHH
Q 002976 587 LVVGPGPLKRYLDAY 601 (861)
Q Consensus 587 ~I~~p~~~~~~L~~~ 601 (861)
.||+++...++++..
T Consensus 103 ~v~~~~~~~~~~~~~ 117 (404)
T 2ohh_A 103 PIYCTEVAVKGLLKH 117 (404)
T ss_dssp CEEECHHHHHHHHHH
T ss_pred EEEECHHHHHHHHHH
Confidence 799999888777654
No 58
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.78 E-value=2e-08 Score=104.78 Aligned_cols=80 Identities=21% Similarity=0.167 Sum_probs=55.1
Q ss_pred ccEEEEEecCCCCCCCCCCccEEEEEEe---CCceEEEeCCcchHHHHHH---HhCccchhhhhccccEEEEeccchhhh
Q 002976 491 DLEIVLLGTGSSQPSKYRNVSSIYVNLF---SKGSLLLDCGEGTLGQLKR---RYGVEGADSAVRKLRCIWISHIHADHH 564 (861)
Q Consensus 491 ~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~---~~~~iLlDcGegt~~qL~r---~~g~~~~~~~l~~i~~IfISH~H~DH~ 564 (861)
.|.+..+-.++ ..++|++|..+ ++..+|||+|.+...++.. ..| .+|++|++||.|.||+
T Consensus 2 ~m~~~~~~~~~------~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g--------~~i~~Il~TH~H~DH~ 67 (245)
T 2gcu_A 2 KLLFRQLFENE------SSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELG--------LKLIYAMNTHVHADHV 67 (245)
T ss_dssp CEEEEEEEETT------TTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHT--------CEEEEEECSSCCSSSC
T ss_pred CcEEEEeecCC------CceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCC--------CeeeEEEeCCCChhhh
Confidence 35666665433 23678999864 2578999999875444433 123 2599999999999999
Q ss_pred ccHHHHHHHHHHhhcCCCCCCeEEEeCch
Q 002976 565 AGLARILALRRDLLKGVPHEPLLVVGPGP 593 (861)
Q Consensus 565 ~GL~~ll~~~~~~~~g~~~~pl~I~~p~~ 593 (861)
.|+..|...+ ....||++..
T Consensus 68 gg~~~l~~~~---------~~~~v~~~~~ 87 (245)
T 2gcu_A 68 TGTGLLKTKL---------PGVKSVISKA 87 (245)
T ss_dssp BSHHHHHHHS---------TTCEEEEEGG
T ss_pred hhHHHHHHhC---------CCCeEEeccc
Confidence 9999886531 2356887764
No 59
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=98.77 E-value=1.9e-08 Score=105.82 Aligned_cols=80 Identities=18% Similarity=0.245 Sum_probs=55.7
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcc--hHHHHHHHhCccchhhhhccccEEEEeccchhhhccH
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEG--TLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGL 567 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGeg--t~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL 567 (861)
..|+|..++.++ ..+|++|...++..+|||+|.+ ....|.+ .| .+|++|++||.|.||++|+
T Consensus 6 g~m~i~~i~~~~-------~n~~yli~~~~~~~vlID~G~~~~i~~~l~~-~g--------~~i~~Il~TH~H~DH~gg~ 69 (258)
T 2qed_A 6 GSMNLNSIPAFQ-------DNYIWVLTNDEGRCVIVDPGEAAPVLKAIAE-HK--------WMPEAIFLTHHHHDHVGGV 69 (258)
T ss_dssp -CCEEEEEEETT-------TEEEEEEECTTSEEEEECCSCHHHHHHHHHH-HT--------CEEEEEECCSCCHHHHTTH
T ss_pred CccEEEEecccC-------ceEEEEEEECCCcEEEEeCCCcHHHHHHHHH-cC--------CCCCEEEeCCCCccccCCH
Confidence 468999998554 2457888642467899999975 2233332 23 2799999999999999999
Q ss_pred HHHHHHHHHhhcCCCCCCeEEEeCchH
Q 002976 568 ARILALRRDLLKGVPHEPLLVVGPGPL 594 (861)
Q Consensus 568 ~~ll~~~~~~~~g~~~~pl~I~~p~~~ 594 (861)
..+.... ....||++...
T Consensus 70 ~~l~~~~---------~~~~v~~~~~~ 87 (258)
T 2qed_A 70 KELLQHF---------PQMTVYGPAET 87 (258)
T ss_dssp HHHHHHC---------TTCEEEECGGG
T ss_pred HHHHHHC---------CCCEEEecccc
Confidence 9885431 22678888643
No 60
>3kl7_A Putative metal-dependent hydrolase; structural genomics, JOI for structural genomics, JCSG; 2.30A {Parabacteroides distasonis atcc 8503}
Probab=98.77 E-value=2.7e-08 Score=103.13 Aligned_cols=130 Identities=10% Similarity=0.103 Sum_probs=87.2
Q ss_pred CCCCeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhc
Q 002976 39 PINTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAG 118 (861)
Q Consensus 39 ~~~~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~ 118 (861)
|.+..|+|+.+|.+ |++|..++.++|||+|.+... -..+.++++|||||.|.||+ |+..+... .
T Consensus 25 ~~~~~~~it~lg~s--------~~li~~~~~~iliDpg~~~~~-----~~~~~~id~VliTH~H~DH~-~~~~l~~~-~- 88 (235)
T 3kl7_A 25 KSGKELTITFIKHG--------SLMLTYDNHSIQVDPVSEYAD-----YTTFPKADIILITHEHGDHL-DPKAIQAV-E- 88 (235)
T ss_dssp TTSCEEEEEEEETT--------EEEEEETTEEEEESCCTTTCC-----TTSSCCCSEEEECCSSTTTC-CHHHHHHH-C-
T ss_pred CCCCCeEEEEEcce--------EEEEEECCEEEEECCCCCccc-----hhhCCCCCEEEECCCccccC-CHHHHHHh-h-
Confidence 34567999999963 899999999999999987532 12455899999999999999 77766542 1
Q ss_pred cCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCcee-EeeCCcEEEEEEEcCCCCCC
Q 002976 119 IGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHII-LVDNELAKISAILLKPSCSD 197 (861)
Q Consensus 119 ~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~d~~i~V~~~~l~h~~~~ 197 (861)
.. .+.||+|++....+.. . .. ...+. .++.++++|++++..|....
T Consensus 89 --~~--~~~v~~~~~~~~~l~~---~---------~~-----------------l~~g~~~~~~g~~~i~~~p~~H~~~~ 135 (235)
T 3kl7_A 89 --KS--DTEIIANENSQKKLGK---G---------KV-----------------LKNGDTDTSISYMKIEAVPAYNTTPG 135 (235)
T ss_dssp --CT--TCEEEECHHHHHHHTC---S---------EE-----------------CCTTCEECCSTTCEEEEEECCCCSTT
T ss_pred --cC--CCEEEEcHHHHHHhcC---c---------EE-----------------ecCCCEEEEECCEEEEEEEeecCCCc
Confidence 12 4779999877655421 0 11 12233 55667899999999997410
Q ss_pred CCCCCCCCCeeEEEEEeCCc
Q 002976 198 GSPVKPGETSVIYVCELPEI 217 (861)
Q Consensus 198 ~~~~~~~~~s~gY~~~~~~~ 217 (861)
.....+...+.||+|+..+.
T Consensus 136 ~~~~~~~~~~~g~~i~~~g~ 155 (235)
T 3kl7_A 136 RDKYHPRHRDNGYILTFDGL 155 (235)
T ss_dssp GGGTSCTTTSEEEEEEETTE
T ss_pred cccccCCCCceEEEEEeCCe
Confidence 00000112357999987544
No 61
>2wyl_A L-ascorbate-6-phosphate lactonase ULAG; hydrolase; 2.59A {Escherichia coli} PDB: 2wym_A*
Probab=98.76 E-value=5.1e-08 Score=107.76 Aligned_cols=122 Identities=12% Similarity=0.090 Sum_probs=77.2
Q ss_pred CCCCeeEEEEEeeCCCCCCCCcEEEEEeC-CcEEEEE--cChhHH----------HHHHH---------------cCCC-
Q 002976 39 PINTLSYVQILGTGMDTQDTSPSVLLFFD-NQRFIFN--AGEGLQ----------RFCTE---------------HKIK- 89 (861)
Q Consensus 39 ~~~~~~~l~~LGtgs~~~~~~~slll~~~-~~~yLfD--~GeGtq----------r~l~~---------------~~i~- 89 (861)
+....|++++||++ |++|+.+ +.++||| ||+|.+ +++.+ ..++
T Consensus 33 ~~~~~~~it~lG~s--------~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~ql~~~~G~~~l~~~~~~~p~~l~~ 104 (360)
T 2wyl_A 33 VAPGTFAMWWLGCT--------GIWLKSEGGTNVCVDFWCGTGKQSHGNPLMKQGHQMQRMAGVKKLQPNLRTTPFVLDP 104 (360)
T ss_dssp CCTTCEEEEEEETT--------EEEEECTTCCEEEESCCCCCCCCCCCC----------------CCCCCCBCSCCCCCG
T ss_pred CCCCcEEEEEeccc--------EEEEEeCCCCEEEEeecCCCCcccccccccccchhhhhhcCccccCCCcccCCCccCH
Confidence 44556899999963 8999995 8999999 999862 12211 0133
Q ss_pred --cCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCC
Q 002976 90 --LSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLP 167 (861)
Q Consensus 90 --~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (861)
+.++++|||||.|+||+ |++++........ + .+.||+|.++..++... .+ .. .....
T Consensus 105 ~~l~~id~VliTH~H~DHi-g~~~l~~l~~~~~-~--~~~v~~p~~~~~~l~~~-g~-~~---~~~~~------------ 163 (360)
T 2wyl_A 105 FAIRQIDAVLATHDHNDHI-DVNVAAAVMQNCA-D--DVPFIGPKTCVDLWIGW-GV-PK---ERCIV------------ 163 (360)
T ss_dssp GGCCCCSEEECSBSCTTTC-CHHHHHHHHHHSC-T--TCCEEECHHHHHHHHHH-TC-CG---GGEEE------------
T ss_pred HHcCCCCEEEECCCchhcC-CHHHHHHHHhcCC-C--CCEEEEcHHHHHHHHHc-CC-Ch---heEEE------------
Confidence 35799999999999999 6655432221111 1 35699999887776542 11 00 00111
Q ss_pred CCccCCCceeEeeCCcEEEEEEEcCCC
Q 002976 168 DSAKSANHIILVDNELAKISAILLKPS 194 (861)
Q Consensus 168 ~~~~~~~~~~~~~d~~i~V~~~~l~h~ 194 (861)
...+..++.++++|++++..|.
T Consensus 164 -----l~~g~~~~~g~~~v~~~~~~H~ 185 (360)
T 2wyl_A 164 -----VKPGDVVKVKDIEIHALDAFDR 185 (360)
T ss_dssp -----CCTTCEEEETTEEEEEEECCCC
T ss_pred -----cCCCCEEEECCEEEEEEeccCc
Confidence 1223345557799999999986
No 62
>3af5_A Putative uncharacterized protein PH1404; archaeal CPSF, beta-CAsp family, KH domain, ribonuclease, ME beta-lactamase superfamily, archaea; 2.60A {Pyrococcus horikoshii} PDB: 3af6_A*
Probab=98.75 E-value=1.2e-08 Score=121.24 Aligned_cols=95 Identities=14% Similarity=0.119 Sum_probs=68.3
Q ss_pred CCCCeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHH------HHHHcC---C--Cc--CCCCEEEECcCCcCc
Q 002976 39 PINTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQR------FCTEHK---I--KL--SKVDHIFLSRVCSET 105 (861)
Q Consensus 39 ~~~~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr------~l~~~~---i--~~--~ki~~IFiTH~H~DH 105 (861)
+....|++++||+++.. .++|++|..++..+|||||.+... .+...+ + .+ .+|++|||||.|+||
T Consensus 184 ~~~~~m~i~~LG~~~~v--g~s~~LI~~~~~~ILID~G~~~~~~~~g~~~l~~l~~~~~g~~~~~~~Id~VllTH~H~DH 261 (651)
T 3af5_A 184 YKSRWIRITGLGGFREV--GRSALLVQTDESFVLVDFGVNVAMLNDPYKAFPHFDAPEFQYVLREGLLDAIIITHAHLDH 261 (651)
T ss_dssp CCCSCEEEEEEECSSSS--SCCEEEEEESSCEEEECCCCCGGGTTCHHHHSCCTTCHHHHHHHHTTCCCEEECSCSSHHH
T ss_pred CCCCceEEEEEecCCCC--CCcEEEEEECCcEEEEeCCCChhccccchhhcccccchhhccCcccCCCCEEEECCCChHh
Confidence 33455899999988532 357999999999999999987431 111111 2 45 789999999999999
Q ss_pred cCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHH
Q 002976 106 AGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAM 141 (861)
Q Consensus 106 i~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~ 141 (861)
++||+.++.. +.. ...||+++.+..++...
T Consensus 262 iGglp~L~~~----~~~--~~pIy~t~~t~~ll~~~ 291 (651)
T 3af5_A 262 CGMLPYLFRY----NLF--DGPIYTTPPTRDLMVLL 291 (651)
T ss_dssp HTTHHHHHHT----TCC--CSCEEECHHHHHHHHHH
T ss_pred hcCHHHHHhc----CCC--CceEEEcHHHHHHHHHH
Confidence 9999988741 101 24499999887766543
No 63
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=98.74 E-value=2.8e-08 Score=104.74 Aligned_cols=77 Identities=14% Similarity=0.180 Sum_probs=54.1
Q ss_pred cEEEEEEeCCceEEEeCCcchH-HHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEE
Q 002976 511 SSIYVNLFSKGSLLLDCGEGTL-GQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVV 589 (861)
Q Consensus 511 Ss~ll~~~~~~~iLlDcGegt~-~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~ 589 (861)
+|++|. ++..+|||||.+.. .++.+.+.. . ....+|++|+|||.|.||++|+..+.... +...||
T Consensus 44 N~yli~--~~~~iLID~G~~~~~~~~~~~l~~--~-~~~~~i~~IilTH~H~DH~gg~~~l~~~~---------~~~~v~ 109 (262)
T 3hnn_A 44 NSYVIE--GDKTAIIDPPVESFMKIYLEALQQ--T-VNLKKLDYVILGHFSPNRIPTFKALLELA---------PQITFV 109 (262)
T ss_dssp EEEEEE--SSSEEEECCCCHHHHHHHHHHHHH--H-SCGGGEEEEECSSCCGGGHHHHHHHHHHC---------TTCEEE
T ss_pred EEEEEE--CCCEEEEECCCcchHHHHHHHHHH--h-CChhhCCEEEECCCCcchhchHHHHHHHC---------CCCEEE
Confidence 577776 36799999998632 233221110 0 01468999999999999999999886531 357899
Q ss_pred eCchHHHHHHHH
Q 002976 590 GPGPLKRYLDAY 601 (861)
Q Consensus 590 ~p~~~~~~L~~~ 601 (861)
+++....++..+
T Consensus 110 ~~~~~~~~l~~~ 121 (262)
T 3hnn_A 110 CSLPAAGDLRAA 121 (262)
T ss_dssp ECHHHHHHHHHH
T ss_pred ECHHHHHHHHHH
Confidence 999888877654
No 64
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=98.74 E-value=4.3e-08 Score=103.18 Aligned_cols=76 Identities=22% Similarity=0.286 Sum_probs=51.4
Q ss_pred cEEEEEecCCCCCCCCCCccEEEEEEe-CCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHH
Q 002976 492 LEIVLLGTGSSQPSKYRNVSSIYVNLF-SKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLA 568 (861)
Q Consensus 492 ~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~-~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~ 568 (861)
|+|.++-+|+ ...|++|... ++..+|||+|.+- ...|.+ .|. +|++|++||.|.||++|+.
T Consensus 1 m~i~~i~~~~-------~n~~yli~~~~~~~~vlID~G~~~~i~~~l~~-~g~--------~i~~IllTH~H~DH~gg~~ 64 (260)
T 1qh5_A 1 MKVEVLPALT-------DNYMYLVIDDETKEAAIVDPVQPQKVVDAARK-HGV--------KLTTVLTTHHHWDHAGGNE 64 (260)
T ss_dssp CEEEEEEETT-------TEEEEEEEETTTTEEEEESCSSHHHHHHHHHH-HTC--------EEEEEECCCSSHHHHTTHH
T ss_pred CEEEEEEecC-------ceEEEEEEECCCCEEEEEcCCCHHHHHHHHHH-cCC--------CccEEEeCCCCccccCCHH
Confidence 4566665553 2358888763 3578999999642 222322 332 5899999999999999999
Q ss_pred HHHHHHHHhhcCCCCCCeEEEeCc
Q 002976 569 RILALRRDLLKGVPHEPLLVVGPG 592 (861)
Q Consensus 569 ~ll~~~~~~~~g~~~~pl~I~~p~ 592 (861)
.|.... +...||++.
T Consensus 65 ~l~~~~---------~~~~v~~~~ 79 (260)
T 1qh5_A 65 KLVKLE---------SGLKVYGGD 79 (260)
T ss_dssp HHHHHS---------TTCEEEESC
T ss_pred HHHHHC---------CCCEEEECc
Confidence 886531 236788875
No 65
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.73 E-value=6.4e-08 Score=104.58 Aligned_cols=91 Identities=20% Similarity=0.228 Sum_probs=56.1
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEEe-CCceEEEeCCcch---HHHHHHHh---CccchhhhhccccEEEEeccchh
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNLF-SKGSLLLDCGEGT---LGQLKRRY---GVEGADSAVRKLRCIWISHIHAD 562 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~~-~~~~iLlDcGegt---~~qL~r~~---g~~~~~~~l~~i~~IfISH~H~D 562 (861)
..|+|..+.+++ ...|++|..+ ++..+|||||... ...|.+.+ |.. ....+|++|++||.|.|
T Consensus 27 ~~m~i~~i~~~~-------~n~~ylI~~~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~---~~~~~i~~IllTH~H~D 96 (311)
T 2p18_A 27 SAFSVTVVPTLK-------DNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNA---DVTYTFSTILSTHKHWD 96 (311)
T ss_dssp TTEEEEEEEETT-------TEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC-----------CCEEEEEEESSSSHH
T ss_pred CCcEEEEEecCC-------CcEEEEEEeCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCC---CCCCCccEEEeCCCCcc
Confidence 468888887633 2458888763 3678999996332 22333211 310 00257999999999999
Q ss_pred hhccHHHHHHHHHHhhcCCCCCCeEEEeCch
Q 002976 563 HHAGLARILALRRDLLKGVPHEPLLVVGPGP 593 (861)
Q Consensus 563 H~~GL~~ll~~~~~~~~g~~~~pl~I~~p~~ 593 (861)
|+.|+..|...... .....+..||++..
T Consensus 97 H~gg~~~l~~~~~~---~~~~~~~~v~~~~~ 124 (311)
T 2p18_A 97 HSGGNAKLKAELEA---MNSTVPVVVVGGAN 124 (311)
T ss_dssp HHTTHHHHHHHHHS---CC--CCCEEEEEGG
T ss_pred ccCCHHHHHHhhhh---cccCCCCEEEEech
Confidence 99999988765321 00112467887754
No 66
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=98.72 E-value=2e-08 Score=107.51 Aligned_cols=73 Identities=23% Similarity=0.399 Sum_probs=50.0
Q ss_pred EEEEecCCCCCCCCCCccEEEEEEeCCceEEEeCCcch----HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHH
Q 002976 494 IVLLGTGSSQPSKYRNVSSIYVNLFSKGSLLLDCGEGT----LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLAR 569 (861)
Q Consensus 494 i~fLGTGsa~Ps~~Rn~Ss~ll~~~~~~~iLlDcGegt----~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ 569 (861)
..++|.. ..|...+.++|++|+. +++.+|||||.+. ...+.+.+. ..-.+|++|++||.|.||++|+..
T Consensus 17 ~~v~g~~-p~p~~~~~~n~~li~~-~~~~ilID~G~~~~~~~~~~l~~~l~-----~~~~~i~~Ii~TH~H~DH~gg~~~ 89 (289)
T 4ad9_A 17 VRVLGCN-PGPMTLQGTNTYLVGT-GPRRILIDTGEPAIPEYISCLKQALT-----EFNTAIQEIVVTHWHRDHSGGIGD 89 (289)
T ss_dssp EEEECSC-CBTTTBTCCEEEEECS-SSSEEEECCCSTTCHHHHHHHHHHHH-----HTTCCEEEEECSCSSHHHHTTHHH
T ss_pred EEEeCCC-CCCCcCCceEEEEEec-CCceEEEeCCCCCChHHHHHHHHHHH-----HcCCCceEEEEcCCCCcccccHHH
Confidence 4455643 3444467788999975 6789999999753 122332111 011379999999999999999999
Q ss_pred HHHH
Q 002976 570 ILAL 573 (861)
Q Consensus 570 ll~~ 573 (861)
|...
T Consensus 90 l~~~ 93 (289)
T 4ad9_A 90 ICKS 93 (289)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8764
No 67
>2i7x_A Protein CFT2; polyadenylation, metallo-B-lactamase, PRE-mRNA processing, artemis, V(D)J recombination, double-strand break repair; 2.50A {Saccharomyces cerevisiae} SCOP: d.157.1.10
Probab=98.71 E-value=2.1e-08 Score=119.90 Aligned_cols=90 Identities=17% Similarity=0.197 Sum_probs=64.4
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhH-----H---HHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHH
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGL-----Q---RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT 115 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGt-----q---r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t 115 (861)
|++++|++|+.. .+++|++|..++.++|||||.+. . ..+. .... +|++|||||.|+||++|||.++..
T Consensus 1 m~~t~L~gg~~e-v~~n~~LIe~~~~~ILID~G~~~~~~~~~~~l~~L~--~~~~-~IdaVlLTH~H~DHiGgLp~L~~~ 76 (717)
T 2i7x_A 1 MTYKYNCCDDGS-GTTVGSVVRFDNVTLLIDPGWNPSKVSYEQCIKYWE--KVIP-EIDVIILSQPTIECLGAHSLLYYN 76 (717)
T ss_dssp CCEEEEECCSSS-SSCCCEEEEETTEEEEECCCCCTTTSCHHHHHHHHH--TTGG-GCCEEECCCSSHHHHTTHHHHHHH
T ss_pred CEEEEEeecCCC-CCCCEEEEEECCeEEEEeCCCCcccchhhhHHHHHH--hcCC-CCCEEEECCCChHHHCCHHHHHHh
Confidence 568999877532 36789999999999999999764 1 1122 2333 899999999999999999988753
Q ss_pred Hhc-cCCCCCcEEEEcCccHHHHHHH
Q 002976 116 LAG-IGDEGLSVNVWGPSDLKYLVDA 140 (861)
Q Consensus 116 ~~~-~~~~~~~l~IyGP~gl~~~l~~ 140 (861)
+.. .+ ..+.||+++.+..++..
T Consensus 77 ~~~g~~---~~~pIY~t~~t~~l~~~ 99 (717)
T 2i7x_A 77 FTSHFI---SRIQVYATLPVINLGRV 99 (717)
T ss_dssp SHHHHH---HTCEEEEEHHHHHHHHH
T ss_pred hhhccc---CCceEEecchhHHHHHH
Confidence 210 00 02569999877665544
No 68
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.70 E-value=4e-08 Score=105.62 Aligned_cols=77 Identities=25% Similarity=0.293 Sum_probs=56.3
Q ss_pred CccEEEEEEeCCceEEEeCCcc-hHHHHHH---HhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCC
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEG-TLGQLKR---RYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHE 584 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGeg-t~~qL~r---~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~ 584 (861)
+.+|++|+. ++..+|||||.+ ...++.+ ..|. ...+|++|++||.|.||++|+..+....
T Consensus 57 ~~~~~li~~-~~~~iLiD~G~~~~~~~~~~~l~~~g~-----~~~~i~~ii~TH~H~DH~gg~~~l~~~~---------- 120 (303)
T 4ax1_B 57 GISALLVTS-DAGHILVDAATPQAGPQILANIRALGF-----RPEDVRAIVFSHEHFDHAGSLAELQKAT---------- 120 (303)
T ss_dssp SSCCEEECC-TTCEEEECCBSTTCHHHHHHHHHHTTC-----CGGGEEEEECSCSSHHHHTTHHHHHHHH----------
T ss_pred CceEEEEEe-CCcEEEEECCCcccHHHHHHHHHHcCC-----CHHHCcEEEcCCCCccccCCHHHHHhhc----------
Confidence 367899986 778999999964 2222222 2443 2456999999999999999999886532
Q ss_pred CeEEEeCchHHHHHHHH
Q 002976 585 PLLVVGPGPLKRYLDAY 601 (861)
Q Consensus 585 pl~I~~p~~~~~~L~~~ 601 (861)
...||+++....++...
T Consensus 121 ~~~v~~~~~~~~~l~~~ 137 (303)
T 4ax1_B 121 GAPVYARAPAIDTLKRG 137 (303)
T ss_dssp CCCEEEEHHHHHHHHHT
T ss_pred CCEEEEcHHHHHHHhcc
Confidence 24689999888877654
No 69
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=98.70 E-value=3.3e-08 Score=106.50 Aligned_cols=76 Identities=17% Similarity=0.139 Sum_probs=53.6
Q ss_pred CccEEEEEEeCCceEEEeCCcch-H----HHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCC
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEGT-L----GQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPH 583 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGegt-~----~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~ 583 (861)
.++|++|+..+++.+|||||.+. . .+|.+.+. ...+|++|++||.|.||++|+..+... .
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~~~------~~~~i~~Ii~TH~H~DH~gg~~~l~~~---------~ 87 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISRDAELVWADLCRWVA------DPSQVHYWLITHKHYDHCGLLPYLCPR---------L 87 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHHCS------CGGGEEEEECCCCSTTTTTTHHHHGGG---------C
T ss_pred CceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHHhc------CcccceEEEeccCCccccCCHHHHHHh---------C
Confidence 36789984337789999999864 2 22333210 136899999999999999999887432 1
Q ss_pred CCeEEEeCchHHHHHH
Q 002976 584 EPLLVVGPGPLKRYLD 599 (861)
Q Consensus 584 ~pl~I~~p~~~~~~L~ 599 (861)
+...||+++...+++.
T Consensus 88 ~~a~v~~~~~~~~~~~ 103 (303)
T 2vw8_A 88 PNVQVLASERTCQAWK 103 (303)
T ss_dssp TTCEEEEEHHHHHHTT
T ss_pred CCCeEEECHHHHHHHh
Confidence 3478999988766553
No 70
>3bv6_A Metal-dependent hydrolase; metallo protein, beta-lactamase like fold, MCSG, structural PSI-2, protein structure initiative; 1.80A {Vibrio cholerae o1 biovar eltor}
Probab=98.70 E-value=5.8e-08 Score=108.05 Aligned_cols=123 Identities=15% Similarity=0.096 Sum_probs=78.9
Q ss_pred CCCCCeeEEEEEeeCCCCCCCCcEEEEEeC-CcEEEEE--cChhHH----------HHHHH---------------cCCC
Q 002976 38 NPINTLSYVQILGTGMDTQDTSPSVLLFFD-NQRFIFN--AGEGLQ----------RFCTE---------------HKIK 89 (861)
Q Consensus 38 ~~~~~~~~l~~LGtgs~~~~~~~slll~~~-~~~yLfD--~GeGtq----------r~l~~---------------~~i~ 89 (861)
.+....|+++++|++ |++|+.+ +.++||| ||+|.+ +++.+ ..++
T Consensus 56 ~~~~~~~~it~lG~s--------~~lI~~~~g~~iLiDP~~G~g~~~~~~~~~~~~~q~~~~~G~~~l~p~~~~~p~~l~ 127 (379)
T 3bv6_A 56 VVEPNTFSMWWLGCT--------GIWLKSAGNTNLSIDFWCGTGKKTQKNRLMNTQHQMMRMGGVEALQPNLRTSIFPLD 127 (379)
T ss_dssp CCCTTCEEEEEEETT--------EEEEEETTCCEEEESCCCCCCCCCSSCCBCCTTCHHHHHHCCCBCCCCCBCSCCCSC
T ss_pred cCCCCceEEEEeccc--------EEEEEeCCCCEEEEccCCCCCccccccccccccchhheecCccccCccccCCCCccC
Confidence 344556899999963 8999996 8999999 998863 11111 1133
Q ss_pred ---cCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcC
Q 002976 90 ---LSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASL 166 (861)
Q Consensus 90 ---~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (861)
+.++++|||||.|+||+ |++++..-..... ..+.||+|.++..++... .+ .. .....
T Consensus 128 ~~~~~~iD~IliTH~H~DHi-g~~~l~~l~~~~~---~~~~v~~~~~~~~~l~~~-g~-~~---~~~~~----------- 187 (379)
T 3bv6_A 128 PFAIKEIDAVLASHDHADHI-DVNVAAAVLQNCG---EHVKFIGPQACVDLWLGW-GV-PQ---ERCIV----------- 187 (379)
T ss_dssp GGGCCCCSEEECSBCSGGGC-CHHHHHHHHHHSC---TTCEEEECHHHHHHHHHH-TC-CG---GGEEE-----------
T ss_pred hHHCCCCCEEEECCCCcccC-ChHHHHHHHhcCC---CCcEEEecHHHHHHHHHc-CC-Ch---hhEEE-----------
Confidence 45799999999999999 6665542221111 147799999887776542 11 00 00111
Q ss_pred CCCccCCCceeEeeCCcEEEEEEEcCCC
Q 002976 167 PDSAKSANHIILVDNELAKISAILLKPS 194 (861)
Q Consensus 167 ~~~~~~~~~~~~~~d~~i~V~~~~l~h~ 194 (861)
...+..++.++++|++++..|.
T Consensus 188 ------l~~g~~~~~g~~~v~~~~~~H~ 209 (379)
T 3bv6_A 188 ------AKVGDVLEIGDVKIRVLDSFDR 209 (379)
T ss_dssp ------CCTTCEEEETTEEEEEEECCCH
T ss_pred ------eCCCCEEEECCEEEEEEecccc
Confidence 1223345567899999999884
No 71
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=98.70 E-value=5.1e-08 Score=100.05 Aligned_cols=74 Identities=18% Similarity=0.224 Sum_probs=52.8
Q ss_pred ccEEEEEEeCCceEEEeCCcc--hHHHHHHHhCccchhhh-hccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCe
Q 002976 510 VSSIYVNLFSKGSLLLDCGEG--TLGQLKRRYGVEGADSA-VRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPL 586 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGeg--t~~qL~r~~g~~~~~~~-l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl 586 (861)
++|++|+. ++..+|||||.+ ...++.+.+. .. -.+|++|++||.|.||++|+..+.. ...
T Consensus 27 ~n~~li~~-~~~~iLiD~G~~~~~~~~~~~~l~-----~~~g~~i~~vi~TH~H~DH~gg~~~~~~-----------~~~ 89 (223)
T 1m2x_A 27 ANAVYLVT-DKGVVVIDCPWGEDKFKSFTDEIY-----KKHGKKVIMNIATHSHDDRAGGLEYFGK-----------IGA 89 (223)
T ss_dssp EEEEEEEE-TTEEEEESCCSSGGGHHHHHHHHH-----HHHCCCEEEEECSSSSTTTTTTHHHHHH-----------TTC
T ss_pred ccEEEEEe-CCEEEEEeCCCChhHHHHHHHHHH-----HHhCCCeEEEEeccCCccccCchhhHhh-----------CCC
Confidence 57889986 788999999975 2233332111 01 1479999999999999999987743 136
Q ss_pred EEEeCchHHHHHHH
Q 002976 587 LVVGPGPLKRYLDA 600 (861)
Q Consensus 587 ~I~~p~~~~~~L~~ 600 (861)
.||+++...+++..
T Consensus 90 ~v~~~~~~~~~~~~ 103 (223)
T 1m2x_A 90 KTYSTKMTDSILAK 103 (223)
T ss_dssp EEEEEHHHHHHHHH
T ss_pred eEEEcHHHHHHHHh
Confidence 79999888776654
No 72
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=98.68 E-value=7.6e-08 Score=99.40 Aligned_cols=75 Identities=15% Similarity=0.067 Sum_probs=54.2
Q ss_pred ccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhh-hccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCe
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSA-VRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPL 586 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~-l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl 586 (861)
++|++|+. ++..+|||||.+. ..++.+... +. ..+|++|++||.|.||++|+..+.. ...
T Consensus 37 ~n~~li~~-~~~~iLiD~G~~~~~~~~~~~~l~-----~~~~~~i~~ii~TH~H~DH~gg~~~~~~-----------~~~ 99 (232)
T 1a7t_A 37 SNGMIVIN-NHQAALLDTPINDAQTEMLVNWVT-----DSLHAKVTTFIPNHWHGDCIGGLGYLQR-----------KGV 99 (232)
T ss_dssp EEEEEEEE-TTEEEEESCCSSHHHHHHHHHHHH-----HHHCCEEEEEECSSSSHHHHTTHHHHHH-----------TTC
T ss_pred ceEEEEEe-CCEEEEEeCCCCHHHHHHHHHHHH-----HhcCCCeEEEEeCCCCccccCCHHHHHh-----------CCC
Confidence 57888886 6789999999863 223333111 11 2579999999999999999987743 136
Q ss_pred EEEeCchHHHHHHHH
Q 002976 587 LVVGPGPLKRYLDAY 601 (861)
Q Consensus 587 ~I~~p~~~~~~L~~~ 601 (861)
.||+++...+++...
T Consensus 100 ~v~~~~~~~~~~~~~ 114 (232)
T 1a7t_A 100 QSYANQMTIDLAKEK 114 (232)
T ss_dssp EEEEEHHHHHHHHHH
T ss_pred eEEEcHHHHHHHHhc
Confidence 799998887777643
No 73
>2xr1_A Cleavage and polyadenylation specificity factor 1 subunit; hydrolase, metallo-beta-lactamase, beta-CAsp, RNA processing; 2.59A {Methanosarcina mazei}
Probab=98.67 E-value=1.6e-08 Score=119.94 Aligned_cols=91 Identities=16% Similarity=0.243 Sum_probs=67.2
Q ss_pred CCeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHH---HHHHc---CC-CcCCCCEEEECcCCcCccCcHHHHH
Q 002976 41 NTLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQR---FCTEH---KI-KLSKVDHIFLSRVCSETAGGLPGLL 113 (861)
Q Consensus 41 ~~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr---~l~~~---~i-~~~ki~~IFiTH~H~DHi~GLpgll 113 (861)
+..|+|++||+++.. .++|++|..++..+|||||.+... .+... +. .+.+|++|||||.|+||++||+.++
T Consensus 181 ~~~m~I~~LG~~~ev--g~s~~LI~~~~~~ILID~G~~~~~~~~~l~~l~~~~~~~~~~Id~VllTH~H~DHiGgl~~L~ 258 (640)
T 2xr1_A 181 DQWVRVTALGGCKEV--GRSCFLLSTPESRILIDCGVNVGSDENMTPYLYVPEVFPLNQIDAVIVTHAHLDHQGLVPLLF 258 (640)
T ss_dssp CCCCEEEEEECSSSS--BCCEEEEECSSCEEEECCCCBCSSCSSCCCCTTSTTTCSGGGCCEEECCSSCHHHHTTHHHHH
T ss_pred CCceEEEEEecCCCC--CCcEEEEEECCeEEEEeCCCCccccccccccccccccCCcccCcEEEECCCChhhhccHHHHH
Confidence 345899999988532 357999999999999999987421 11111 24 5678999999999999999999887
Q ss_pred HHHhccCCCCCcEEEEcCccHHHHHHH
Q 002976 114 LTLAGIGDEGLSVNVWGPSDLKYLVDA 140 (861)
Q Consensus 114 ~t~~~~~~~~~~l~IyGP~gl~~~l~~ 140 (861)
.. + . ...||+++.....+..
T Consensus 259 ~~----~-~--~~~Iy~t~~t~~ll~~ 278 (640)
T 2xr1_A 259 KY----G-Y--EGPVYCTPPTRDLMVL 278 (640)
T ss_dssp HT----T-C--CSCEEECHHHHHHHHH
T ss_pred hc----C-C--CCeEEECHHHHHHHHH
Confidence 42 1 1 2459999988776554
No 74
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=98.67 E-value=5.9e-08 Score=105.19 Aligned_cols=77 Identities=19% Similarity=0.173 Sum_probs=55.5
Q ss_pred CCCccEEEEEEeCCceEEEeCCcchH---HHHH---HHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcC
Q 002976 507 YRNVSSIYVNLFSKGSLLLDCGEGTL---GQLK---RRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKG 580 (861)
Q Consensus 507 ~Rn~Ss~ll~~~~~~~iLlDcGegt~---~qL~---r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g 580 (861)
.+.++|++|+. +++.+|||||.+.. ..+. +..|. ...+|++|++||.|.||++|+..+...
T Consensus 19 ~~~~n~~li~~-~~~~ilID~G~~~~~~~~~l~~~l~~~g~-----~~~~i~~Vi~TH~H~DH~gg~~~l~~~------- 85 (317)
T 2zo4_A 19 LKTVNLYLLQG-AGEVALVDTALGTRAARGALELHLAELGL-----CFQDVKTILLTHHHPDHYGLSGFFEGL------- 85 (317)
T ss_dssp TCEEEEEEEEE-TTEEEEECCCCSSHHHHHHHHHHHHHTTC-----CGGGCCEEEESCCSHHHHTTHHHHHHT-------
T ss_pred CCcEEEEEEEc-CCceEEEECCCCCHHHHHHHHHHHHHcCC-----ChhhcCEEEEcCCCCcccccHHHHHhC-------
Confidence 35578899986 67899999998752 1222 22443 246799999999999999999877431
Q ss_pred CCCCCeEEEeCchHHHHHHH
Q 002976 581 VPHEPLLVVGPGPLKRYLDA 600 (861)
Q Consensus 581 ~~~~pl~I~~p~~~~~~L~~ 600 (861)
...||+++....++..
T Consensus 86 ----~~~v~~~~~~~~~~~~ 101 (317)
T 2zo4_A 86 ----GARVFLHEEEFARGHR 101 (317)
T ss_dssp ----TCEEEEEGGGTTTHHH
T ss_pred ----CCEEEEcHHHHHHHHh
Confidence 3578888877666654
No 75
>3m8t_A 'BLR6230 protein; subclass B3 beta-lactamase, zinc enzyme, sulfonamide complex hydrolase-hydrolase inhibitor complex; HET: 4NZ; 1.33A {Bradyrhizobium japonicum} PDB: 3lvz_A* 2gmn_A
Probab=98.67 E-value=4.8e-08 Score=104.57 Aligned_cols=137 Identities=9% Similarity=0.041 Sum_probs=89.6
Q ss_pred EEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChh-----HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccC
Q 002976 46 VQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEG-----LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIG 120 (861)
Q Consensus 46 l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeG-----tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~ 120 (861)
+.++|.+ ..+|++|..++..+|||+|.+ +...+.+.++++.+|++||+||.|+||++|++.+....
T Consensus 47 v~~~~~~-----~~n~~li~~~~~~iLID~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~---- 117 (294)
T 3m8t_A 47 IYYVGTD-----GIAVYVIKTSQGLILMDTAMPQSTGMIKDNIAKLGFKVADIKLILNTHAHLDHTGGFAEIKKET---- 117 (294)
T ss_dssp EEECCCS-----SSCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSCCCHHHHTTHHHHHHHH----
T ss_pred EEEeCCC-----CeEEEEEEECCceEEEECCCchhHHHHHHHHHHcCCCHHHCcEEEECCCCccccccHHHHhhcc----
Confidence 5556543 456899999999999999964 45667788888889999999999999999999887532
Q ss_pred CCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcC-CCCCCCC
Q 002976 121 DEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLK-PSCSDGS 199 (861)
Q Consensus 121 ~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~-h~~~~~~ 199 (861)
.+.||+++.....+.....+...... ...+.. .... .....+..+..++++|+.+.++ |.
T Consensus 118 ----~~~v~~~~~~~~~~~~~~~~~~~~~~--~~~~~~------~~~~--~~~~~g~~~~~g~~~i~~~~~pgHt----- 178 (294)
T 3m8t_A 118 ----GAQLVAGERDKPLLEGGYYPGDEKNE--DLAFPA------VKVD--RAVKEGDRVTLGDTTLTAHATPGHS----- 178 (294)
T ss_dssp ----CCEEEEEGGGHHHHHHTCBTTBTTCG--GGCCCC------CCCS--EEECTTCEEEETTEEEEEEECCSSS-----
T ss_pred ----CCEEEEChHHHHHHhcccccCccccc--cCCCCC------CCCc--eEeCCCCEEEeCCEEEEEEeCCCCC-----
Confidence 25699999888777654221100000 000000 0000 0112334556677888888776 54
Q ss_pred CCCCCCCeeEEEEEeC
Q 002976 200 PVKPGETSVIYVCELP 215 (861)
Q Consensus 200 ~~~~~~~s~gY~~~~~ 215 (861)
..+++|.+...
T Consensus 179 -----~g~~~~~~~~~ 189 (294)
T 3m8t_A 179 -----PGCTSWEMTVK 189 (294)
T ss_dssp -----TTCEEEEEEEE
T ss_pred -----ccCEEEEEEcc
Confidence 36889988754
No 76
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.66 E-value=3.1e-08 Score=103.86 Aligned_cols=66 Identities=24% Similarity=0.229 Sum_probs=46.4
Q ss_pred ccEEEEEEe-CCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCe
Q 002976 510 VSSIYVNLF-SKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPL 586 (861)
Q Consensus 510 ~Ss~ll~~~-~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl 586 (861)
..|++|... .+..+|||||.+. ...|.+ .| .+|++|++||.|.||++|+..+.... +.
T Consensus 12 n~~yli~~~~~~~~~lID~g~~~~i~~~l~~-~g--------~~i~~Il~TH~H~DH~gg~~~l~~~~----------~~ 72 (254)
T 1xm8_A 12 NYAYILHDEDTGTVGVVDPSEAEPIIDSLKR-SG--------RNLTYILNTHHHYDHTGGNLELKDRY----------GA 72 (254)
T ss_dssp EEEEEEECTTTCCEEEECCSSHHHHHHHHHH-HT--------CCCCEEECSSCCHHHHTTHHHHHHHH----------CC
T ss_pred eEEEEEEECCCCEEEEEeCCCHHHHHHHHHH-cC--------CCccEEEECCCCCcccccHHHHHHHc----------CC
Confidence 358888752 2468999999642 223332 23 36899999999999999999886542 25
Q ss_pred EEEeCchH
Q 002976 587 LVVGPGPL 594 (861)
Q Consensus 587 ~I~~p~~~ 594 (861)
.||++...
T Consensus 73 ~v~~~~~~ 80 (254)
T 1xm8_A 73 KVIGSAMD 80 (254)
T ss_dssp EEEEEGGG
T ss_pred eEEEchhh
Confidence 68887654
No 77
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.66 E-value=4.2e-08 Score=102.06 Aligned_cols=74 Identities=12% Similarity=0.105 Sum_probs=52.3
Q ss_pred ccEEEEEEeCCceEEEeCCcc--hHHHHHHHhCccchhhh-hccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCe
Q 002976 510 VSSIYVNLFSKGSLLLDCGEG--TLGQLKRRYGVEGADSA-VRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPL 586 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGeg--t~~qL~r~~g~~~~~~~-l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl 586 (861)
.+|++|+. ++..+|||||.+ ...++.+.+. .. -.+|++|++||.|.||++|+..+... .+
T Consensus 48 ~n~~li~~-~~~~iLID~G~~~~~~~~l~~~l~-----~~~~~~i~~vi~TH~H~DH~gg~~~l~~~-----------~~ 110 (243)
T 4hl2_A 48 SNGLIVRD-GGRVLVVDTAWTDDQTAQILNWIK-----QEINLPVALAVVTHAHQDKMGGMDALHAA-----------GI 110 (243)
T ss_dssp EEEEEEEE-TTEEEEESCCSSHHHHHHHHHHHH-----HHTCCCEEEEEECSSSHHHHTTHHHHHHT-----------TC
T ss_pred ceEEEEEE-CCcEEEEECCCCCccHHHHHHHHH-----HhhCCCeeEEEECCCCccccCCHHHHHhC-----------CC
Confidence 57888876 778999999953 2333433211 11 13699999999999999999988431 46
Q ss_pred EEEeCchHHHHHHH
Q 002976 587 LVVGPGPLKRYLDA 600 (861)
Q Consensus 587 ~I~~p~~~~~~L~~ 600 (861)
.||+++....++..
T Consensus 111 ~v~~~~~~~~~~~~ 124 (243)
T 4hl2_A 111 ATYANALSNQLAPQ 124 (243)
T ss_dssp EEEEEHHHHHHGGG
T ss_pred eEEECHHHHHHHhc
Confidence 79999887766543
No 78
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=98.65 E-value=8.6e-08 Score=98.61 Aligned_cols=74 Identities=18% Similarity=0.207 Sum_probs=53.5
Q ss_pred ccEEEEEEeCCceEEEeCCcchH--HHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGTL--GQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt~--~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~ 587 (861)
++|++|+. ++..+|||||.+.. .++.+.+.. ....+|++|++||.|.||++|+..+... .+.
T Consensus 41 ~n~~li~~-~~~~iliD~G~~~~~~~~~~~~l~~----~~~~~i~~ii~TH~H~DH~gg~~~l~~~-----------~~~ 104 (227)
T 1mqo_A 41 SNGLVLNT-SKGLVLVDSSWDDKLTKELIEMVEK----KFQKRVTDVIITHAHADRIGGIKTLKER-----------GIK 104 (227)
T ss_dssp EEEEEEEE-TTEEEEESCCSSHHHHHHHHHHHHH----HHTSCEEEEECCCCSHHHHTTHHHHHHH-----------TCE
T ss_pred ceEEEEEe-CCeEEEEECCCChHHHHHHHHHHHH----hcCCCceEEEeCCCCchhccchHHHhhC-----------CcE
Confidence 57888886 77899999998852 233321110 0147899999999999999999887532 367
Q ss_pred EEeCchHHHHHH
Q 002976 588 VVGPGPLKRYLD 599 (861)
Q Consensus 588 I~~p~~~~~~L~ 599 (861)
||+++...+++.
T Consensus 105 v~~~~~~~~~~~ 116 (227)
T 1mqo_A 105 AHSTALTAELAK 116 (227)
T ss_dssp EECBHHHHHHHH
T ss_pred EEeccchHHHHH
Confidence 999987776654
No 79
>1sml_A Protein (penicillinase); metallo-beta-lactamase, antibiotic resistance, binuclear zinc, hydrolase; 1.70A {Stenotrophomonas maltophilia} SCOP: d.157.1.1 PDB: 2aio_A* 2fm6_A 2fu6_A 2fu7_A* 2fu8_A* 2fu9_A* 2gfj_A* 2gfk_A* 2h6a_A 2hb9_A* 2qdt_A* 2qjs_A 2qin_A
Probab=98.61 E-value=6.7e-08 Score=102.18 Aligned_cols=129 Identities=13% Similarity=0.094 Sum_probs=82.8
Q ss_pred CCcEEEEEeCCcEEEEEcChh-----HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEG-----LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeG-----tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
..+|++|..++..+|||||.+ +...+.+.++++.+|++||+||.|+||++|+..+.... .+.||+++
T Consensus 37 ~~~~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~--------~~~v~~~~ 108 (269)
T 1sml_A 37 DLTALLVQTPDGAVLLDGGMPQMASHLLDNMKARGVTPRDLRLILLSHAHADHAGPVAELKRRT--------GAKVAANA 108 (269)
T ss_dssp TBCCEEEEETTEEEEECCBSGGGHHHHHHHHHHTTCCGGGEEEEECSCCSHHHHTTHHHHHHHS--------SCEEEECH
T ss_pred CcEEEEEEeCCceEEEECCCCccHHHHHHHHHHcCCChHHCcEEEeCCCCccccCCHHHHHHhc--------CCeEEECH
Confidence 456899999999999999975 34567778888889999999999999999999876431 25699998
Q ss_pred cHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcC-CCCCCCCCCCCCCCeeEEE
Q 002976 133 DLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLK-PSCSDGSPVKPGETSVIYV 211 (861)
Q Consensus 133 gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~-h~~~~~~~~~~~~~s~gY~ 211 (861)
.....+...... .. .+............ .....+..++.++++|+.+.++ |+ ..+++|.
T Consensus 109 ~~~~~l~~~~~~---~~-----~~~~~~~~~~~~~~--~~~~~g~~~~~g~~~i~~~~~pGHt----------~g~~~~~ 168 (269)
T 1sml_A 109 ESAVLLARGGSD---DL-----HFGDGITYPPANAD--RIVMDGEVITVGGIVFTAHFMAGHT----------PGSTAWT 168 (269)
T ss_dssp HHHHHHHTTTCS---BT-----TTBTSSCCCCCCCS--EECCTTCEEEETTEEEEEEECCSSS----------TTCEEEE
T ss_pred HHHHHHhcCCcc---cc-----ccccccCCCCCCCC--eEeCCCCEEEECCEEEEEEECCCCC----------cccEEEE
Confidence 776665432100 00 00000000000000 0122334555677888888887 54 3788998
Q ss_pred EEe
Q 002976 212 CEL 214 (861)
Q Consensus 212 ~~~ 214 (861)
+..
T Consensus 169 ~~~ 171 (269)
T 1sml_A 169 WTD 171 (269)
T ss_dssp EEE
T ss_pred Eec
Confidence 764
No 80
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=98.60 E-value=3.8e-07 Score=93.92 Aligned_cols=76 Identities=11% Similarity=-0.004 Sum_probs=54.2
Q ss_pred ccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~ 587 (861)
.+|++|.. +++.+|||||.+. ..++.+.... ....+|++|++||.|.||++|+..+.. ....
T Consensus 26 ~n~~li~~-~~~~iLiD~G~~~~~~~~~~~~l~~----~~~~~i~~ii~TH~H~DH~gg~~~~~~-----------~~~~ 89 (233)
T 3q6v_A 26 ENSMVYIG-TDGITIIGATWTPETAETLYKEIRK----VSPLPINEVINTNYHTDRAGGNAYWKT-----------LGAK 89 (233)
T ss_dssp EEEEEEEC-SSCEEEESCCSSHHHHHHHHHHHHH----HCCCCEEEEECSSSSHHHHTTHHHHHH-----------TTCE
T ss_pred CcEEEEEe-CCeEEEEECCCCHHHHHHHHHHHHH----hcCCCcEEEEECCCChhhhChHHHHhh-----------CCCE
Confidence 56888875 6789999999875 2333331110 013689999999999999999998751 2367
Q ss_pred EEeCchHHHHHHHH
Q 002976 588 VVGPGPLKRYLDAY 601 (861)
Q Consensus 588 I~~p~~~~~~L~~~ 601 (861)
||+++....++...
T Consensus 90 v~~~~~~~~~~~~~ 103 (233)
T 3q6v_A 90 IVATQMTYDLQKSQ 103 (233)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEEcHHHHHHHHhh
Confidence 99998887777653
No 81
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=98.59 E-value=5.8e-08 Score=111.53 Aligned_cols=71 Identities=13% Similarity=0.040 Sum_probs=48.9
Q ss_pred ccEEEEEecCCCCCCCCCCccEEEEEE-eCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHH
Q 002976 491 DLEIVLLGTGSSQPSKYRNVSSIYVNL-FSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLAR 569 (861)
Q Consensus 491 ~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~-~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ 569 (861)
+|+|..+-+|+. .++|++|.. .++..+|||+|.+.. ++...... .-.+|++|++||.|.||+.|+..
T Consensus 3 ~m~i~~~~~~~~------~~n~yli~~~~~~~~ilID~g~~~~-~~~~~l~~-----~~~~i~~Il~TH~H~DH~gg~~~ 70 (474)
T 3tp9_A 3 AMYLRRFYDEGL------AHASYLVGCQETGEACVIDPARDVE-PYLLTAKR-----EGLRIVAALETHIHADFVSGARE 70 (474)
T ss_dssp CEEEEEEEETTT------TEEEEEEEETTTCEEEEESCCSCCH-HHHHHHHH-----HTCEEEEEECSSCCSSSCCCHHH
T ss_pred ceEEEEEecCCc------eeEEEEEEECCCCEEEEEcCCCChH-HHHHHHHH-----cCCeeEEEEcCcCchhhhCCHHH
Confidence 577777766652 267888832 256789999997742 22221111 11369999999999999999998
Q ss_pred HHHH
Q 002976 570 ILAL 573 (861)
Q Consensus 570 ll~~ 573 (861)
|...
T Consensus 71 l~~~ 74 (474)
T 3tp9_A 71 MADR 74 (474)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 8654
No 82
>1k07_A FEZ-1 beta-lactamase; monomer with alpha-beta/BETA-alpha fold. two monomers PER AS UNIT., hydrolase; HET: GOL; 1.65A {Fluoribacter gormanii} SCOP: d.157.1.1 PDB: 1jt1_A* 1l9y_A
Probab=98.59 E-value=1.2e-07 Score=99.84 Aligned_cols=75 Identities=11% Similarity=0.066 Sum_probs=60.0
Q ss_pred CCcEEEEEeCCcEEEEEcChh-----HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEG-----LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeG-----tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
..+|++|..++..+|||+|.+ ....+.+.++++.+|+.||+||.|+||++|++.+.... .+.||+++
T Consensus 24 ~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~IilTH~H~DH~gg~~~l~~~~--------~~~v~~~~ 95 (263)
T 1k07_A 24 DLASYLIVTPRGNILINSDLEANVPMIKASIKKLGFKFSDTKILLISHAHFDHAAGSELIKQQT--------KAKYMVMD 95 (263)
T ss_dssp SBCCEEEEETTEEEEECCCCGGGHHHHHHHHHHTTCCGGGEEEEECSSSSHHHHTTHHHHHHHH--------CCEEEEEH
T ss_pred CeEEEEEEeCCceEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEeCCCCccccccHHHHHHhc--------CCEEEEcH
Confidence 457899998889999999975 34567777888889999999999999999999876432 25599988
Q ss_pred cHHHHHHH
Q 002976 133 DLKYLVDA 140 (861)
Q Consensus 133 gl~~~l~~ 140 (861)
.....+..
T Consensus 96 ~~~~~~~~ 103 (263)
T 1k07_A 96 EDVSVILS 103 (263)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHhc
Confidence 77666543
No 83
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=98.55 E-value=1.5e-07 Score=106.10 Aligned_cols=78 Identities=13% Similarity=0.188 Sum_probs=53.9
Q ss_pred ccEEEEEEeCCceEEEeCCcch-HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT-LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLV 588 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt-~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I 588 (861)
.+|++|+ ++..+|||||.+. ..++.+.+.. . ....+|++|+|||.|.||++|+..+... .+...|
T Consensus 41 ~n~~li~--~~~~iLID~G~~~~~~~~~~~l~~--~-~~~~~i~~ii~TH~H~DH~gg~~~l~~~---------~~~~~v 106 (414)
T 2q9u_A 41 YNSYFID--DECPTVIDSVKYPFAEEWLSRIAA--C-CPLDKIKYVVMNHAEGDHASSLKDHYHK---------FTNATF 106 (414)
T ss_dssp ECCEEEC--SSSCEEECCCCGGGHHHHHHHHHH--H-SCGGGCCEEECSCCSGGGTTTHHHHGGG---------STTCEE
T ss_pred eeEEEEE--CCCEEEEeCCCcccHHHHHHHHHH--h-cCcccCCEEEeCCCCcchhcCHHHHHHH---------CCCCEE
Confidence 4678886 3678999999863 2233321110 0 0146899999999999999999887432 135789
Q ss_pred EeCchHHHHHHHH
Q 002976 589 VGPGPLKRYLDAY 601 (861)
Q Consensus 589 ~~p~~~~~~L~~~ 601 (861)
|+++...+++...
T Consensus 107 ~~~~~~~~~~~~~ 119 (414)
T 2q9u_A 107 VCTKKCQEHLKIL 119 (414)
T ss_dssp EECHHHHHHHHHH
T ss_pred EECHHHHHHHHHH
Confidence 9999888777654
No 84
>3dha_A N-acyl homoserine lactone hydrolase; zinc bimetallohydrolase, quorum quenching; HET: C6L GOL; 0.95A {Bacillus thuringiensis serovar kurstakorganism_taxid} PDB: 3dhb_A* 3dhc_A* 2a7m_A* 2br6_A 2btn_A
Probab=98.49 E-value=5.6e-08 Score=101.79 Aligned_cols=88 Identities=13% Similarity=0.046 Sum_probs=67.2
Q ss_pred CCeeEEEEEeeCC---C----C----C-----CCCcEEEEEeCCcEEEEEcChh--------------------------
Q 002976 41 NTLSYVQILGTGM---D----T----Q-----DTSPSVLLFFDNQRFIFNAGEG-------------------------- 78 (861)
Q Consensus 41 ~~~~~l~~LGtgs---~----~----~-----~~~~slll~~~~~~yLfD~GeG-------------------------- 78 (861)
++.|++.+|++|. + + + -..+|++|..++..+|||||.+
T Consensus 5 ~~~~~~~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~lI~~~~~~iLiDtG~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 84 (254)
T 3dha_A 5 MTVKKLYFIPAGRCMLDHSSVNSALTPGKLLNLPVWCYLLETEEGPILVDTGMPESAVNNEGLFNGTFVEGQILPKMTEE 84 (254)
T ss_dssp CCBSEEEEEEEEEEEEEGGGTSTTSCSCCEEEEEEEEEEEEETTEEEEECCCCCGGGBTCTTTTTTSTTTTTEEEEBCGG
T ss_pred cCceEEEEecCccEEechhhccCCCCCCceEEEeeEEEEEECCCccEEEECCCChhhhcccccccccccccccccccCch
Confidence 3558899999884 1 0 1 1236889999999999999965
Q ss_pred --HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHH
Q 002976 79 --LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVD 139 (861)
Q Consensus 79 --tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~ 139 (861)
+...+.+.++++.+|++||+||.|+||++|++.|. ...||+++.....+.
T Consensus 85 ~~l~~~l~~~g~~~~~I~~VilTH~H~DH~gg~~~~~-----------~~~i~~~~~~~~~~~ 136 (254)
T 3dha_A 85 DRIVNILKRVGYEPDDLLYIISSHLHFDHAGGNGAFT-----------NTPIIVQRTEYEAAL 136 (254)
T ss_dssp GSHHHHHHHHTCCGGGCSEEECSCCSHHHHTTGGGCS-----------SSCEEEEHHHHHHHH
T ss_pred hhHHHHHHHcCCCHHHCCEEEcCCChhhcCCChHHCC-----------CCEEEECHHHHHHhh
Confidence 45677888999999999999999999999997432 234888876665554
No 85
>2p4z_A Metal-dependent hydrolases of the beta-lactamase superfamily II; metal-dependent hydrolases of the beta-lactamase superfamily hydrolase; 2.10A {Thermoanaerobacter tengcongensis}
Probab=98.46 E-value=1.8e-07 Score=99.78 Aligned_cols=85 Identities=21% Similarity=0.362 Sum_probs=65.3
Q ss_pred eeEEEEEeeCC--C---CCCCCcEEEEEeCCcEEEEEcChhHH--HHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHH
Q 002976 43 LSYVQILGTGM--D---TQDTSPSVLLFFDNQRFIFNAGEGLQ--RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT 115 (861)
Q Consensus 43 ~~~l~~LGtgs--~---~~~~~~slll~~~~~~yLfD~GeGtq--r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t 115 (861)
..+|++|--.. . ....++|++|+.++..+|||||.+.. ..+.+.++.+.++++||+||.|+||++|++.+...
T Consensus 12 ~~~it~l~dn~~~~~~~~~~~g~s~li~~~~~~iLiD~G~~~~~~~~l~~~g~~~~~i~~v~lTH~H~DH~ggl~~~~~~ 91 (284)
T 2p4z_A 12 SVEVQVLIENVVFARNFVAEHGLSLLLKKGNKEIVVDTGQSENFIKNCGLMGIDVGRIKKVVLTHGHYDHIGGLKGLLER 91 (284)
T ss_dssp CCEEEEEECSBCCSTTCCBCSSCEEEEEETTEEEEECCCSSTHHHHHHHHTTCCGGGCCEEECCCSCHHHHTTHHHHHHH
T ss_pred CEEEEEEEeCCCCCcCcccCCEEEEEEEECCeEEEEeCCCCHHHHHHHHHcCCChhhCCEEEECCCCchhhccHHHHHHH
Confidence 36788774221 1 12467899999999999999998754 56777888889999999999999999999987642
Q ss_pred HhccCCCCCcEEEEcCccH
Q 002976 116 LAGIGDEGLSVNVWGPSDL 134 (861)
Q Consensus 116 ~~~~~~~~~~l~IyGP~gl 134 (861)
. . .+.||+++..
T Consensus 92 ~-----~--~~~v~~~~~~ 103 (284)
T 2p4z_A 92 N-----P--EVKIYTHKEI 103 (284)
T ss_dssp C-----T--TCEEEEEGGG
T ss_pred c-----C--CCceecCHHH
Confidence 1 1 3669998765
No 86
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=98.45 E-value=1.1e-06 Score=90.00 Aligned_cols=76 Identities=13% Similarity=0.058 Sum_probs=54.2
Q ss_pred ccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~ 587 (861)
++|++|.. +++.+|||||.+. ..++.+.... ....+|++|++||.|.||++|+..+.. ....
T Consensus 23 ~n~~li~~-~~~~iLiD~G~~~~~~~~~~~~l~~----~~~~~i~~ii~TH~H~DH~gg~~~l~~-----------~~~~ 86 (227)
T 3iog_A 23 ENSMVYFG-AKGVTVVGATWTPDTARELHKLIKR----VSRKPVLEVINTNYHTDRAGGNAYWKS-----------IGAK 86 (227)
T ss_dssp EEEEEEEC-SSCEEEESCCSSHHHHHHHHHHHHT----TCCSCEEEEECSSSSHHHHTTHHHHHH-----------TTCE
T ss_pred CcEEEEEe-CCeEEEEECCCChHHHHHHHHHHHH----hcCCCeEEEEeCCCchhhcChHHHHhh-----------CCCe
Confidence 57888876 6789999999753 2344332111 013679999999999999999998642 2357
Q ss_pred EEeCchHHHHHHHH
Q 002976 588 VVGPGPLKRYLDAY 601 (861)
Q Consensus 588 I~~p~~~~~~L~~~ 601 (861)
||+++....++...
T Consensus 87 v~~~~~~~~~~~~~ 100 (227)
T 3iog_A 87 VVSTRQTRDLMKSD 100 (227)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEECHHHHHHHHHh
Confidence 89998887777643
No 87
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=98.43 E-value=7.4e-07 Score=94.00 Aligned_cols=75 Identities=16% Similarity=0.138 Sum_probs=53.5
Q ss_pred CccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhh-hccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCC
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSA-VRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEP 585 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~-l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~p 585 (861)
..+|++|+. +++.+|||+|.+. ..++.+... +. -.+|++|++||.|.||++|+..+.. ..
T Consensus 67 ~~n~~li~~-~~~~iLID~G~~~~~~~~l~~~l~-----~~~g~~i~~VilTH~H~DH~gg~~~~~~-----------~~ 129 (265)
T 2y8b_A 67 SSNGLIVRD-ADELLLIDTAWGAKNTVALLAEIE-----KQIGLPVTRSISTHFHDDRVGGVDVLRA-----------AG 129 (265)
T ss_dssp EEEEEEEEE-TTEEEEESCCSSHHHHHHHHHHHH-----HHTCSCEEEEECSSSSHHHHTTHHHHHH-----------TT
T ss_pred cceEEEEEE-CCeEEEEeCCCCHHHHHHHHHHHH-----HhcCCCeEEEEeCCCChhhcCCHHHHhh-----------CC
Confidence 467888886 7889999999752 333433211 11 1279999999999999999987642 13
Q ss_pred eEEEeCchHHHHHHH
Q 002976 586 LLVVGPGPLKRYLDA 600 (861)
Q Consensus 586 l~I~~p~~~~~~L~~ 600 (861)
..||+++...+++..
T Consensus 130 a~v~~~~~~~~~~~~ 144 (265)
T 2y8b_A 130 VATYTSPLTRQLAEA 144 (265)
T ss_dssp CEEEECHHHHHHHHH
T ss_pred CeEEECHHHHHHHHh
Confidence 579999888777654
No 88
>1ztc_A Hypothetical protein TM0894; structural genomics, joint center for structural genomics, J protein structure initiative, PSI, hydrolase; HET: MSE; 2.10A {Thermotoga maritima} SCOP: d.157.1.11
Probab=98.42 E-value=1.3e-07 Score=96.99 Aligned_cols=81 Identities=17% Similarity=0.144 Sum_probs=65.1
Q ss_pred CeeEEEEEeeCC----CC---CCCCcEEEEEeCCcEEEEEcChh-----HHHHHHHcCCCcCCCCEEEECcCCcCccCcH
Q 002976 42 TLSYVQILGTGM----DT---QDTSPSVLLFFDNQRFIFNAGEG-----LQRFCTEHKIKLSKVDHIFLSRVCSETAGGL 109 (861)
Q Consensus 42 ~~~~l~~LGtgs----~~---~~~~~slll~~~~~~yLfD~GeG-----tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GL 109 (861)
-.|.++|+|+++ +. .+..+|++|..++..+|||||.+ ..+.+.+.++++.+|+.||+||.|+||++|+
T Consensus 11 ~~~~~~~~~~~g~~~~p~~~~~~~~n~~li~~~~~~iLID~G~~~~~~~l~~~l~~~g~~~~~i~~ViiTH~H~DH~gg~ 90 (221)
T 1ztc_A 11 HHMELKILVTGGNVFVPGRLNAHFSTVVYLEHKDRRIIIDPGNLSSMDELEEKFSELGISPDDITDVLFTHVHLDHIFNS 90 (221)
T ss_dssp CCEEEEEEECCBEEEETTTEECCBCCEEEEEETTEEEEECCCCGGGHHHHHHHHHHHTCCGGGCCEEECSCCCHHHHGGG
T ss_pred cceeEEEEEecceEEecCCCCCCceEEEEEEeCCeEEEEECCCCcchHHHHHHHHHcCCCHHHCcEEEEcCCccccCCch
Confidence 348999999985 22 24568999999999999999964 5566777888888999999999999999999
Q ss_pred HHHHHHHhccCCCCCcEEEEcCcc
Q 002976 110 PGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 110 pgll~t~~~~~~~~~~l~IyGP~g 133 (861)
+.+. ...||+++.
T Consensus 91 ~~~~-----------~~~v~~~~~ 103 (221)
T 1ztc_A 91 VLFE-----------NATFYVHEV 103 (221)
T ss_dssp GGCT-----------TCEEEEEGG
T ss_pred hhCC-----------CCEEEEeHH
Confidence 7542 245888876
No 89
>3aj3_A MLR6805 protein, 4-pyridoxolactonase; Zn-protein, metallo-beta-lactamase, hydrolase; 1.58A {Mesorhizobium loti} PDB: 3aj0_A
Probab=98.42 E-value=1.1e-07 Score=100.82 Aligned_cols=87 Identities=14% Similarity=0.041 Sum_probs=66.3
Q ss_pred CeeEEEEEeeCCC-C------C---------CCCcEEEEEeCCcEEEEEcChhH--------------------HHHHHH
Q 002976 42 TLSYVQILGTGMD-T------Q---------DTSPSVLLFFDNQRFIFNAGEGL--------------------QRFCTE 85 (861)
Q Consensus 42 ~~~~l~~LGtgs~-~------~---------~~~~slll~~~~~~yLfD~GeGt--------------------qr~l~~ 85 (861)
+.|+|++|++|.. . . ...+|++|..++..+|||||.+. .+.+.+
T Consensus 2 ~~~~i~~l~~G~~~~~~~~~~~~~~~~~~~~~~~~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~l~~~l~~ 81 (274)
T 3aj3_A 2 SDTKVYLLDGGSLVLDGYHVFWNRGPGGEVRFPVYSILIEHAEGRFLIDTGYDYDHVMKVLPFEKPIQEKHQTIPGALGL 81 (274)
T ss_dssp CCCEEEEEEEEEEEEEHHHHTTTTCCCSEEEEEEEEEEEEETTEEEEECCCCCHHHHHHHCGGGCCBCCGGGSHHHHHHH
T ss_pred CccEEEEEcCceEEechHheecCCCCCcEEEeeEEEEEEEeCCccEEEECCCCcccccCccccCCcccCccccHHHHHHH
Confidence 3588999999841 1 0 11368888888899999999875 356778
Q ss_pred cCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHH
Q 002976 86 HKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVD 139 (861)
Q Consensus 86 ~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~ 139 (861)
.++++.+|++||+||.|+||++|++.| . ...||.++.....+.
T Consensus 82 ~g~~~~~i~~VilTH~H~DH~gg~~~~---------~--~a~v~~~~~~~~~~~ 124 (274)
T 3aj3_A 82 LGLEPRDIDVVVNSHFHFDHCGGNKYF---------P--HAKKICHRSEVPQAC 124 (274)
T ss_dssp TTCCGGGCCEEECSCCSGGGTTTGGGC---------T--TSEEEEETTHHHHHH
T ss_pred cCCCHHHCCEEEecCcCcccCCchhhC---------C--CCEEEECHHHHHHHh
Confidence 889999999999999999999999754 1 245888876665543
No 90
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=98.41 E-value=6.2e-07 Score=92.26 Aligned_cols=74 Identities=15% Similarity=0.149 Sum_probs=52.0
Q ss_pred ccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~ 587 (861)
.+|++|+. +++.+|||||.+. ..++.+.+.. .-.+|++|++||.|.||++|+..+... ...
T Consensus 33 ~n~~li~~-~~~~iliD~g~~~~~~~~~~~~l~~-----~g~~i~~ii~TH~H~DH~gg~~~l~~~-----------~~~ 95 (228)
T 1jjt_A 33 KHGLVVLV-NAEAYLIDTPFTAKDTEKLVTWFVE-----RGYKIKGSISSHFHSDSTGGIEWLNSR-----------SIP 95 (228)
T ss_dssp EEEEEEEE-TTEEEEESCCSSHHHHHHHHHHHHT-----TTCEEEEEECSSSSHHHHTTHHHHHHT-----------TCC
T ss_pred ceEEEEEE-CCcEEEEeCCCChhhHHHHHHHHHH-----cCCCeeEEEeCCCChhhhccHHHHHhC-----------CCE
Confidence 57888886 6789999999763 2333332111 012799999999999999999877431 245
Q ss_pred EEeCchHHHHHHH
Q 002976 588 VVGPGPLKRYLDA 600 (861)
Q Consensus 588 I~~p~~~~~~L~~ 600 (861)
||+++...+++..
T Consensus 96 v~~~~~~~~~~~~ 108 (228)
T 1jjt_A 96 TYASELTNELLKK 108 (228)
T ss_dssp EEEEHHHHHHHHH
T ss_pred EEEChHHHHHHHh
Confidence 8888887776654
No 91
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=98.41 E-value=1.1e-06 Score=91.16 Aligned_cols=77 Identities=9% Similarity=-0.009 Sum_probs=50.1
Q ss_pred ccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~ 587 (861)
.+|++|+..++..+|||||.+. ..++.+.+.. ......+ +|++||.|.||++|+..+.. ....
T Consensus 30 ~n~~li~~~~~~~iLiD~G~~~~~~~~l~~~l~~---~~~~~~~-~vi~TH~H~DH~gg~~~l~~-----------~~~~ 94 (246)
T 2fhx_A 30 SNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAK---TMKPKKV-VAINTHFHLDGTGGNEIYKK-----------MGAE 94 (246)
T ss_dssp EEEEEEECTTSEEEEESCCSSHHHHHHHHHHHHH---HHCCSEE-EEECCSSSHHHHTTHHHHHH-----------TTCE
T ss_pred CCEEEEEeCCCeEEEEeCCCCHHHHHHHHHHHHH---hcCCCcE-EEEeCCCCccccChHHHHhh-----------cCCE
Confidence 5788887633468999999763 2333221100 0012344 79999999999999987742 1357
Q ss_pred EEeCchHHHHHHHH
Q 002976 588 VVGPGPLKRYLDAY 601 (861)
Q Consensus 588 I~~p~~~~~~L~~~ 601 (861)
||+++...+++...
T Consensus 95 v~~~~~~~~~~~~~ 108 (246)
T 2fhx_A 95 TWSSDLTKQLRLEE 108 (246)
T ss_dssp EEEEHHHHHHHHHH
T ss_pred EEEcHHHHHHHHhc
Confidence 99998887777543
No 92
>4ax1_B Metallo-beta-lactamase AIM-1; hydrolase, antibiotic resistance, acquired B3, drug binding; 1.40A {Pseudomonas aeruginosa} PDB: 4awy_B 4awz_A 4ax0_B
Probab=98.40 E-value=3.2e-07 Score=98.52 Aligned_cols=75 Identities=15% Similarity=0.132 Sum_probs=60.4
Q ss_pred CCcEEEEEeCCcEEEEEcChh-----HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEG-----LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeG-----tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
..+|++|..++..+|||+|.+ +...+.+.++++.+|++||+||.|+||++|+..+.... .+.||+++
T Consensus 57 ~~~~~li~~~~~~iLiD~G~~~~~~~~~~~l~~~g~~~~~i~~ii~TH~H~DH~gg~~~l~~~~--------~~~v~~~~ 128 (303)
T 4ax1_B 57 GISALLVTSDAGHILVDAATPQAGPQILANIRALGFRPEDVRAIVFSHEHFDHAGSLAELQKAT--------GAPVYARA 128 (303)
T ss_dssp SSCCEEECCTTCEEEECCBSTTCHHHHHHHHHHTTCCGGGEEEEECSCSSHHHHTTHHHHHHHH--------CCCEEEEH
T ss_pred CceEEEEEeCCcEEEEECCCcccHHHHHHHHHHcCCCHHHCcEEEcCCCCccccCCHHHHHhhc--------CCEEEEcH
Confidence 456899999999999999952 45567778888888999999999999999999887532 24489998
Q ss_pred cHHHHHHH
Q 002976 133 DLKYLVDA 140 (861)
Q Consensus 133 gl~~~l~~ 140 (861)
....++..
T Consensus 129 ~~~~~l~~ 136 (303)
T 4ax1_B 129 PAIDTLKR 136 (303)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhc
Confidence 77776654
No 93
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=98.39 E-value=1.5e-06 Score=91.05 Aligned_cols=91 Identities=8% Similarity=0.130 Sum_probs=57.8
Q ss_pred CcEEEEeCCCCC-ChhHHhhcCCC---cE-EEEeccCCCChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeeccCCCCCC
Q 002976 728 GWKIVYSGDTRP-CPELVEASRGA---TV-LIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHFSQRYPKI 802 (861)
Q Consensus 728 G~ki~YsGDT~p-~~~l~~~~~~a---Dl-LIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHfS~Ry~~~ 802 (861)
..-++++|=.-+ .-++++.++.. .+ .|.-..-.-...+ -.++++++..++.++++++++|.+.... .
T Consensus 172 ~GlvvitGCsH~GI~Niv~~a~~~~g~~i~~viGGfHL~~~~~-------~~l~~tl~~l~~~~~~~i~~~HCTg~~a-~ 243 (267)
T 3h3e_A 172 EGLVVITGCSHRGIDNILLDIAETFNERIKMVVGGFHLLKSSD-------DEIEKIVKAFNELGVETVVPCHCTGERA-V 243 (267)
T ss_dssp TEEEEEESCCTTCHHHHHHHHHTTCSSCEEEEEEECCCTTSCH-------HHHHHHHHHHHHTTCCEEEEETTSCHHH-H
T ss_pred CcEEEEeCCCCcCHHHHHHHHHHHhCCCceEEEeccccCCCCH-------HHHHHHHHHHHhcCCCEEEEECCCCHHH-H
Confidence 346888886654 24455544332 23 3444443211101 1357899999999999999999986321 1
Q ss_pred cccccccCCceEEeeeCcEEecCC
Q 002976 803 PVVDETHMHKTCIAFDLMSINLAD 826 (861)
Q Consensus 803 ~~~~~~~~~~v~~A~D~m~i~l~~ 826 (861)
..+.+....++..|+|||+|++++
T Consensus 244 ~~L~~~lp~~v~~~~~G~~iei~~ 267 (267)
T 3h3e_A 244 DIFKREFLGKIMDCYAGLKLEVSD 267 (267)
T ss_dssp HHHHHHCSSEECCCCTTCEEEECC
T ss_pred HHHHHHCCCCEEEecCceEEEeCC
Confidence 234445577899999999999865
No 94
>3adr_A Putative uncharacterized protein ST1585; quorum sensing, quinolone signal, metallo-beta-lactamase FOL conserved hypothetical protein; HET: EPE; 1.80A {Sulfolobus tokodaii}
Probab=98.37 E-value=5.1e-07 Score=94.70 Aligned_cols=84 Identities=19% Similarity=0.229 Sum_probs=60.1
Q ss_pred eEEEEEeeCC-CCCCCCcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCC
Q 002976 44 SYVQILGTGM-DTQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDE 122 (861)
Q Consensus 44 ~~l~~LGtgs-~~~~~~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~ 122 (861)
..+.++..+. +..+..+|++|..++..+|||+|.+..... .++ ..++++||+||.|+||++|++.+...+
T Consensus 4 ~~i~~i~~~~~g~~~~~~~~li~~~~~~iLiD~G~~~~~~~--l~~-~~~i~~vi~TH~H~DH~gg~~~l~~~~------ 74 (261)
T 3adr_A 4 RGLHSIPAGPVEFPEIATVYVMCGEKLTVMIDAGVSNSIAD--FSF-LDKLDYIVLTHLHIDHIGLLPELLQVY------ 74 (261)
T ss_dssp CEEEEEECSCTTCGGGSEEEEEECSSCEEEECCCCTTCCCC--CTT-CSCCCEEECSCCSGGGTTTHHHHHHHS------
T ss_pred CCeEEEeccCCCCCCceEEEEEEcCCcEEEEeCCCCCChhh--cCC-CCCCcEEEECCCCccccCCHHHHHHHh------
Confidence 5677787762 223456788887668899999998753111 155 678999999999999999999877532
Q ss_pred CCcEEEEcCccHHHHH
Q 002976 123 GLSVNVWGPSDLKYLV 138 (861)
Q Consensus 123 ~~~l~IyGP~gl~~~l 138 (861)
.+.||+++.....+
T Consensus 75 --~~~i~~~~~~~~~l 88 (261)
T 3adr_A 75 --KAKVLVKSGFKKYL 88 (261)
T ss_dssp --CCEEEEETTCTHHH
T ss_pred --CCeEEECHHHHHHh
Confidence 24588877654443
No 95
>2zwr_A Metallo-beta-lactamase superfamily protein; hydrolase; 2.20A {Thermus thermophilus} PDB: 2zzi_A
Probab=98.37 E-value=4.3e-07 Score=91.89 Aligned_cols=83 Identities=13% Similarity=0.105 Sum_probs=62.9
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhHHH---HHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccC
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGLQR---FCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIG 120 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGtqr---~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~ 120 (861)
|+|+++..|. ...+|++|..++..+|||+|.+..+ .+.+.++ ++++||+||.|+||++|++.+.... +
T Consensus 1 M~i~~~~~g~---~~~n~~li~~~~~~iliD~G~~~~~l~~~l~~~g~---~i~~vilTH~H~DH~gg~~~l~~~~---~ 71 (207)
T 2zwr_A 1 MRVFPVTLGP---LQENAYLVETGEGPVLIDPGDEPEKLLALFQTTGL---IPLAILLTHAHFDHVGAVAPLVEAL---D 71 (207)
T ss_dssp CEEEEEEETT---TTEEEEEEEETTEEEEECCCSCHHHHHHHHHHHTC---CCSCEECSCCCGGGTTTHHHHHHHH---C
T ss_pred CeEEEEecCC---cccEEEEEEeCCcEEEEeCCCCHHHHHHHHHHcCC---cccEEEECCCChHHHccHHHHHHHh---C
Confidence 5778888763 2467999998899999999976543 3445554 4899999999999999999876432 1
Q ss_pred CCCCcEEEEcCccHHHHHHH
Q 002976 121 DEGLSVNVWGPSDLKYLVDA 140 (861)
Q Consensus 121 ~~~~~l~IyGP~gl~~~l~~ 140 (861)
+.||+++.....+..
T Consensus 72 -----~~v~~~~~~~~~~~~ 86 (207)
T 2zwr_A 72 -----LPVYLHPLDLPLYEG 86 (207)
T ss_dssp -----CCEEECGGGHHHHHT
T ss_pred -----CcEEECHHHHHHHhC
Confidence 349999988777654
No 96
>4efz_A Metallo-beta-lactamase family protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.60A {Burkholderia pseudomallei}
Probab=98.33 E-value=2.8e-06 Score=91.16 Aligned_cols=138 Identities=12% Similarity=0.079 Sum_probs=83.6
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEe--CCcEEEEEcCh------------h---HHHHHHHcCCCcCCCCEEEECcCCcCcc
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFF--DNQRFIFNAGE------------G---LQRFCTEHKIKLSKVDHIFLSRVCSETA 106 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~--~~~~yLfD~Ge------------G---tqr~l~~~~i~~~ki~~IFiTH~H~DHi 106 (861)
|.++.+-.++ ....|++|.. .++.+|||+|- . ....+.+.+++ |++||+||.|+||+
T Consensus 5 m~i~~~~~~~---~~~~~yli~~~~~~~~ilID~g~~~~~~~~~~~~~~~~~l~~~l~~~g~~---i~~Il~TH~H~DH~ 78 (298)
T 4efz_A 5 MTVEGFFDPA---TCTISYLLFDSGSGECALIDSVLDYDPKSGRTRTASADQLIARVAALGAR---VRWLLETHVHADHL 78 (298)
T ss_dssp CEEEEEECTT---TCBEEEEEECTTTCEEEEESCCBEEETTTTEEECHHHHHHHHHHHHHTCE---EEEEECSSCCSSSB
T ss_pred eEEEEEecCC---cccEEEEEEECCCCeEEEEcCCCCccccccccCcccHHHHHHHHHHCCCc---ceEEEECCCchhhh
Confidence 5665555432 1345777765 46789999994 2 33445666654 89999999999999
Q ss_pred CcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEE
Q 002976 107 GGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKI 186 (861)
Q Consensus 107 ~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V 186 (861)
+|+..|.... ...||.++.....+..+....... ..+... . ..+ + .....+..+..++++|
T Consensus 79 gg~~~l~~~~--------~a~i~~~~~~~~~~~~~~~~~~~~-----~~~~~~-~--~~~-~--~~~~~g~~l~~g~~~i 139 (298)
T 4efz_A 79 SAAPYLKTRV--------GGEIAIGRHVTRVQDVFGKLFNAG-----PAFAHD-G--SQF-D--RLLDDGDTLALGALSI 139 (298)
T ss_dssp CCHHHHHHHH--------CCEEEEETTHHHHHHHHHHHTTCC-----TTSCSS-S--TTS-S--EEECTTCEEEETTEEE
T ss_pred hhHHHHHHHh--------CCcEEEChhHHHHHHHHHHhcCCc-----cccccc-c--cCC-C--EEeCCCCEEEECCEEE
Confidence 9998887543 144787777766655443322100 000000 0 000 0 0122344566677888
Q ss_pred EEEEcC-CCCCCCCCCCCCCCeeEEEEEeCC
Q 002976 187 SAILLK-PSCSDGSPVKPGETSVIYVCELPE 216 (861)
Q Consensus 187 ~~~~l~-h~~~~~~~~~~~~~s~gY~~~~~~ 216 (861)
+.+.++ |+ ..+++|.+...+
T Consensus 140 ~vi~tPGHT----------~g~~~~~~~~~~ 160 (298)
T 4efz_A 140 RAMHTPGHT----------PACMTYVVTEAH 160 (298)
T ss_dssp EEEECCSSS----------TTCEEEEEEETT
T ss_pred EEEECCCCC----------cccEEEEECCCc
Confidence 888886 54 478999997653
No 97
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=98.33 E-value=7.3e-07 Score=101.92 Aligned_cols=80 Identities=13% Similarity=0.117 Sum_probs=53.7
Q ss_pred CccEEEEEecCCCCCCCCCCccEEEEEE-eCCceEEEeCCcchHHHHH--HHhCccchhhhhccccEEEEeccchhhhcc
Q 002976 490 DDLEIVLLGTGSSQPSKYRNVSSIYVNL-FSKGSLLLDCGEGTLGQLK--RRYGVEGADSAVRKLRCIWISHIHADHHAG 566 (861)
Q Consensus 490 ~~~~i~fLGTGsa~Ps~~Rn~Ss~ll~~-~~~~~iLlDcGegt~~qL~--r~~g~~~~~~~l~~i~~IfISH~H~DH~~G 566 (861)
.+|+|..+=+|+. .++|++|.. .++..+|||||.+...-+. +..| .+|++|++||.|.||+.|
T Consensus 23 ~~m~i~~~~~~~~------~~nsyli~~~~~~~~vlID~g~~~~~~~~~l~~~g--------~~i~~Il~TH~H~DH~gg 88 (466)
T 3r2u_A 23 NAMFFKQFYDKHL------SQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEG--------LTITHAAETHIHADFASG 88 (466)
T ss_dssp CCEEEEEEEETTT------TEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHT--------CEEEEEECSSCCSSSCCC
T ss_pred CCeEEEEEecCCc------cceEEEEEeCCCCEEEEEcCCCCHHHHHHHHHHCC--------CeeeEEEECCCChhhhcc
Confidence 4577766654442 267888853 2567899999976532211 1223 369999999999999999
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEeCch
Q 002976 567 LARILALRRDLLKGVPHEPLLVVGPGP 593 (861)
Q Consensus 567 L~~ll~~~~~~~~g~~~~pl~I~~p~~ 593 (861)
+..|.... ...||+++.
T Consensus 89 ~~~l~~~~----------~a~v~~~~~ 105 (466)
T 3r2u_A 89 IRDVAIKL----------NANIYVSGE 105 (466)
T ss_dssp HHHHHHHH----------CCEEEEECC
T ss_pred HHHHHHhh----------CCeEEECcc
Confidence 99886542 245776654
No 98
>3rpc_A Possible metal-dependent hydrolase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.49A {Veillonella parvula}
Probab=98.31 E-value=7.4e-07 Score=93.92 Aligned_cols=112 Identities=7% Similarity=0.062 Sum_probs=71.7
Q ss_pred CeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChhH----------HHH-----HHHcCCCcC----CCCEEEECcCC
Q 002976 42 TLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEGL----------QRF-----CTEHKIKLS----KVDHIFLSRVC 102 (861)
Q Consensus 42 ~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeGt----------qr~-----l~~~~i~~~----ki~~IFiTH~H 102 (861)
.+|+|+++|.+ |++|+.++.++|+|++-.- .+. +....+++. ++++|+|||.|
T Consensus 3 ~~m~it~lGha--------~~li~~~g~~iLiDp~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~id~iliTH~H 74 (264)
T 3rpc_A 3 AMTQYTHIRNA--------TGKLTIKNTTFLIDPFLAPKDTYPGFEGTFNYQQRMPMVDLPLSMDDLLSNVTAVVVTHTH 74 (264)
T ss_dssp CCCEEEEEETT--------EEEEEETTEEEEESCCCCCTTCBCCCTTBTTTTSCBSSSCCSSCHHHHHTTCCEEECSCCC
T ss_pred ceEEEEEEeCc--------EEEEEECCEEEEeCcccCCCcCccCCCCcccccccCCCCCCCCCHHHccccCCEEEECCCc
Confidence 35999999953 8999999999999984211 000 000112222 78999999999
Q ss_pred cCccCcHHHHHHHHhccCCCCCcEEEEcC-ccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeC
Q 002976 103 SETAGGLPGLLLTLAGIGDEGLSVNVWGP-SDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDN 181 (861)
Q Consensus 103 ~DHi~GLpgll~t~~~~~~~~~~l~IyGP-~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 181 (861)
.||++|+.-+.. +. .+.||++ .+....+... .+ . ....+ +..++.
T Consensus 75 ~DH~~~~~~~~~------~~--~~~v~~~~~~~~~~l~~~-g~---~---~~~~~-------------------~~~~~~ 120 (264)
T 3rpc_A 75 LDHWDDTAINSI------PK--SLPIFVQNTADKELITSQ-GF---I---DVRII-------------------FESLEF 120 (264)
T ss_dssp GGGSCHHHHHHS------CT--TSCEEESSHHHHHHHHHT-TC---S---CEEEC-------------------SSEEEE
T ss_pred hhhCCCHHHHhh------cc--CCeEEEeCHHHHHHHHhc-CC---C---eeEEe-------------------cccEEE
Confidence 999999865542 12 3458998 6666555431 11 0 01111 113455
Q ss_pred CcEEEEEEEcCCCC
Q 002976 182 ELAKISAILLKPSC 195 (861)
Q Consensus 182 ~~i~V~~~~l~h~~ 195 (861)
++++|++++..|..
T Consensus 121 ~~~~i~~~pa~H~~ 134 (264)
T 3rpc_A 121 NGITLRKTGGSHGT 134 (264)
T ss_dssp TTEEEEEECCCSSC
T ss_pred CCEEEEEeccccCC
Confidence 78999999999974
No 99
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=98.27 E-value=2.3e-06 Score=95.62 Aligned_cols=80 Identities=16% Similarity=0.246 Sum_probs=58.5
Q ss_pred cEEEEEEeCCceEEEeCCcch-HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEEE
Q 002976 511 SSIYVNLFSKGSLLLDCGEGT-LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLVV 589 (861)
Q Consensus 511 Ss~ll~~~~~~~iLlDcGegt-~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I~ 589 (861)
.|+||.. ++..+|||+|... ..++.+.... . -...+|++|++||.|.||++|++.++... .+...|+
T Consensus 53 NsYLI~~-~~~~vLIDtg~~~~~~~~l~~l~~--~-i~~~~IdyIi~TH~h~DH~G~l~~l~~~~--------~~~~~v~ 120 (410)
T 4dik_A 53 NAYLVKL-NGANVLIDGWKGNYAKEFIDALSK--I-VDPKEITHIIVNHTEPDASGSLPATLKTI--------GHDVEII 120 (410)
T ss_dssp EEEEEEC-SSCEEEECCCCGGGHHHHHHHHTT--T-SCGGGCCEEECSCCCHHHHTTHHHHHHHH--------CSCCEEE
T ss_pred EEEEEEE-CCeEEEEeCCCcchHHHHHHHHHH--h-cCcccCCEEEeCcCCcchhhhHHHHHHHc--------CCCCEEE
Confidence 3788865 6778999999654 3444443221 0 12478999999999999999999997653 1458899
Q ss_pred eCchHHHHHHHHH
Q 002976 590 GPGPLKRYLDAYE 602 (861)
Q Consensus 590 ~p~~~~~~L~~~~ 602 (861)
+++....+++.+.
T Consensus 121 ~s~~~~~~l~~~~ 133 (410)
T 4dik_A 121 ASNFGKRLLEGFY 133 (410)
T ss_dssp ECHHHHHHHHHHH
T ss_pred eCHHHHHHHHhhc
Confidence 9998888887653
No 100
>2bib_A CBPE, teichoic acid phosphorylcholine esterase/ choline protein; choline-binding protein, PCE, phosphorylcholine estera hydrolase; HET: PC BTB; 1.92A {Streptococcus pneumoniae} SCOP: b.109.1.1 d.157.1.8 PDB: 1wra_A*
Probab=98.25 E-value=4.8e-06 Score=97.24 Aligned_cols=80 Identities=19% Similarity=0.247 Sum_probs=60.8
Q ss_pred CeeEEEEEeeCCCCCCCCcEEEEEeCCcEEEEEcChh----------------------------HHHHHHHcCCCcCCC
Q 002976 42 TLSYVQILGTGMDTQDTSPSVLLFFDNQRFIFNAGEG----------------------------LQRFCTEHKIKLSKV 93 (861)
Q Consensus 42 ~~~~l~~LGtgs~~~~~~~slll~~~~~~yLfD~GeG----------------------------tqr~l~~~~i~~~ki 93 (861)
..++|+||.+|. +.+.|++|+.++..+|||||.+ +...|.+.++ .+|
T Consensus 4 ~~~~I~~ldvG~---gqg~~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~L~~~gi--~~i 78 (547)
T 2bib_A 4 SGNKIHFINVQE---GGSDAIILESNGHFAMVDTGEDYDFPDGSDSRYPWREGIETSYKHVLTDRVFRRLKELSV--QKL 78 (547)
T ss_dssp SCEEEEEECBSS---SBCCEEEEEETTEEEEEECCCCSCCCCSSSTTSCCCTTCCCCGGGCCHHHHHHHHHHTTC--CCB
T ss_pred cCceEEEEEcCC---CCceEEEEEeCCeEEEEeCCCCCcccccccccccccccccccccchhHHHHHHHHHhcCc--ccc
Confidence 348899999872 2467999999999999999975 2345555554 579
Q ss_pred CEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 94 DHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 94 ~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
+.|||||.|.||++||+.++..+. ...||.|+.
T Consensus 79 d~vilTH~H~DHiggl~~l~~~~~-------~~~i~~~~~ 111 (547)
T 2bib_A 79 DFILVTHTHSDHIGNVDELLSTYP-------VDRVYLKKY 111 (547)
T ss_dssp SCEECCCSCHHHHTTHHHHHHHSC-------BSEEECCCC
T ss_pred cEEEEcCCCccccCCHHHHHHhCC-------ccEEEECcc
Confidence 999999999999999998875421 124787764
No 101
>3l6n_A Metallo-beta-lactamase; zinc, hydolase, antibiotics resistance, hydrolase; 1.65A {Chryseobacterium indologenes} SCOP: d.157.1.0
Probab=98.24 E-value=1.3e-06 Score=89.03 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=52.8
Q ss_pred CCcEEEEEeCCcEEEEEcChh---HHHHHHHcCC-CcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEG---LQRFCTEHKI-KLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeG---tqr~l~~~~i-~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
.++|++|..++..+|||||.+ ..+.+...+. ...++++||+||.|+||++|++.+.. . .+.||+++.
T Consensus 30 ~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~---~------~~~v~~~~~ 100 (219)
T 3l6n_A 30 SANSMYLVTKKGVVLFDVPWEKVQYQSLMDTIKKRHNLPVVAVFATHSHDDRAGDLSFFNN---K------GIKTYATAK 100 (219)
T ss_dssp EEEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHSCCEEEEECSSSSTTTTCCTHHHHH---T------TCEEEECHH
T ss_pred cceEEEEEeCCEEEEEeCCCChHHHHHHHHHHHHhcCCceeEEEecCCCcccccCHHHHHh---C------CCEEEEcHH
Confidence 357899999999999999953 2332222111 12478999999999999999988752 1 356999987
Q ss_pred HHHHHHH
Q 002976 134 LKYLVDA 140 (861)
Q Consensus 134 l~~~l~~ 140 (861)
....+..
T Consensus 101 ~~~~~~~ 107 (219)
T 3l6n_A 101 TNEFLKK 107 (219)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 7666543
No 102
>2xf4_A Hydroxyacylglutathione hydrolase; HET: PG4; 2.30A {Salmonella enterica}
Probab=98.22 E-value=2.6e-06 Score=86.18 Aligned_cols=82 Identities=13% Similarity=0.158 Sum_probs=57.3
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEe--CCcEEEEEcChhHHH---HHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhc
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFF--DNQRFIFNAGEGLQR---FCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAG 118 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~--~~~~yLfD~GeGtqr---~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~ 118 (861)
|+|+++-.+. -..+|++|.. ++..+|||+|.+..+ .+.+.++ ++++||+||.|+||++|++.+....
T Consensus 1 m~i~~~~~~~---~~~n~~li~~~~~~~~iLiD~G~~~~~l~~~l~~~g~---~i~~ii~TH~H~DH~gg~~~l~~~~-- 72 (210)
T 2xf4_A 1 MNYRIIPVTA---FSQNCSLIWCEQTRLAALVDPGGDAEKIKQEVDASGV---TLMQILLTHGHLDHVGAASELAQHY-- 72 (210)
T ss_dssp CEEEEEEETT---TTEEEEEEECTTTCEEEEECCCSCHHHHHHHHHHHTC---EEEEEECSCSCHHHHTTHHHHHHHH--
T ss_pred CeEEEEeeCC---cccEEEEEEecCCCcEEEEcCCCCHHHHHHHHHHcCC---ceeEEEECCCChhhhcCHHHHHHHc--
Confidence 4556665542 2356888874 678999999976443 3444454 3789999999999999998876532
Q ss_pred cCCCCCcEEEEcCccHHHHHH
Q 002976 119 IGDEGLSVNVWGPSDLKYLVD 139 (861)
Q Consensus 119 ~~~~~~~l~IyGP~gl~~~l~ 139 (861)
.+.||+++.....+.
T Consensus 73 ------~~~v~~~~~~~~~~~ 87 (210)
T 2xf4_A 73 ------GVPVIGPEKEDEFWL 87 (210)
T ss_dssp ------TCCEECCCGGGHHHH
T ss_pred ------CCcEEEecchHHHHh
Confidence 144999887665543
No 103
>2gcu_A Putative hydroxyacylglutathione hydrolase 3; ethylmalonic encephalopathy, ETHE1, structural genomics, protein structure initiative; 1.48A {Arabidopsis thaliana}
Probab=98.20 E-value=4.1e-06 Score=87.12 Aligned_cols=80 Identities=13% Similarity=0.024 Sum_probs=56.1
Q ss_pred CeeEEEEEeeCCCCCCCCcEEEEEeC----CcEEEEEcChhH-H---HHHHHcCCCcCCCCEEEECcCCcCccCcHHHHH
Q 002976 42 TLSYVQILGTGMDTQDTSPSVLLFFD----NQRFIFNAGEGL-Q---RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLL 113 (861)
Q Consensus 42 ~~~~l~~LGtgs~~~~~~~slll~~~----~~~yLfD~GeGt-q---r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll 113 (861)
|.|.+..+-.+. ....|++|..+ +..+|||+|.+. . ..+.+.++ +|++||+||.|+||++|+..|.
T Consensus 1 ~~m~~~~~~~~~---~~~~~yli~~~~~~~~~~ilID~g~~~~~~~~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~ 74 (245)
T 2gcu_A 1 MKLLFRQLFENE---SSTFTYLLADVSHPDKPALLIDPVDKTVDRDLKLIDELGL---KLIYAMNTHVHADHVTGTGLLK 74 (245)
T ss_dssp CCEEEEEEEETT---TTEEEEEEEETTSTTCEEEEESCBGGGHHHHHHHHHHHTC---EEEEEECSSCCSSSCBSHHHHH
T ss_pred CCcEEEEeecCC---CceEEEEEEcCCCCCCcEEEEeCCCchHHHHHHHHHHCCC---eeeEEEeCCCChhhhhhHHHHH
Confidence 457777776542 24568888874 689999999863 2 23455555 4899999999999999998876
Q ss_pred HHHhccCCCCCcEEEEcCccH
Q 002976 114 LTLAGIGDEGLSVNVWGPSDL 134 (861)
Q Consensus 114 ~t~~~~~~~~~~l~IyGP~gl 134 (861)
... . .+.||+++..
T Consensus 75 ~~~-----~--~~~v~~~~~~ 88 (245)
T 2gcu_A 75 TKL-----P--GVKSVISKAS 88 (245)
T ss_dssp HHS-----T--TCEEEEEGGG
T ss_pred HhC-----C--CCeEEecccc
Confidence 421 1 2558887643
No 104
>2r2d_A AGR_PTI_140P, Zn-dependent hydrolases; lactonase, N-acyl hompserine lactone, DI-nuclear zinc center quenching, AIIB, phosphate; HET: PO4; 1.75A {Agrobacterium tumefaciens}
Probab=98.18 E-value=6.7e-07 Score=94.70 Aligned_cols=70 Identities=10% Similarity=0.131 Sum_probs=56.5
Q ss_pred cEEEEEeCCcEEEEEcChhHH---------------------------HHHHHcCCCcCCCCEEEECcCCcCccCcHHHH
Q 002976 60 PSVLLFFDNQRFIFNAGEGLQ---------------------------RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGL 112 (861)
Q Consensus 60 ~slll~~~~~~yLfD~GeGtq---------------------------r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgl 112 (861)
+|++|..++..+|||||.+.. .++.+.++.+.+|++|||||.|+||++|++.|
T Consensus 44 ~~~li~~~~~~iLiD~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~i~~VilTH~H~DH~gg~~~~ 123 (276)
T 2r2d_A 44 SAYLIQCTDATVLYDTGCHPECMGTNGRWPAQSQLNAPYIGASECNLPERLRQLGLSPDDISTVVLSHLHNDHAGCVEYF 123 (276)
T ss_dssp EEEEEECSSCEEEECCCSCTTCSSTTCSSCHHHHHHSCBCCCTTCSHHHHHHHTTCCGGGCSEEECSCCSTTTSTTGGGC
T ss_pred EEEEEECCCCCEEEECCCCcccccccccccHhHHhhcCCCCChhhCHHHHHHHcCCCHHHCCEEEecCcccccCCChhhC
Confidence 588999888999999997643 46778889999999999999999999999754
Q ss_pred HHHHhccCCCCCcEEEEcCccHHHHHHH
Q 002976 113 LLTLAGIGDEGLSVNVWGPSDLKYLVDA 140 (861)
Q Consensus 113 l~t~~~~~~~~~~l~IyGP~gl~~~l~~ 140 (861)
. ...||+++.....+..
T Consensus 124 ---------~--~~~v~~~~~~~~~~~~ 140 (276)
T 2r2d_A 124 ---------G--KSRLIAHEDEFATAVR 140 (276)
T ss_dssp ---------S--SSEEEEEHHHHHHHHH
T ss_pred ---------C--CCEEEECHHHHHHHhc
Confidence 1 2558998876655543
No 105
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=98.17 E-value=4.4e-06 Score=88.22 Aligned_cols=74 Identities=12% Similarity=0.101 Sum_probs=49.8
Q ss_pred ccEEEEEEeCCceEEEeCCcch--HHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeE
Q 002976 510 VSSIYVNLFSKGSLLLDCGEGT--LGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLL 587 (861)
Q Consensus 510 ~Ss~ll~~~~~~~iLlDcGegt--~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~ 587 (861)
..|++|.. +++.+|||+|.+. ..++.+.... ..-..|++|++||.|.||++|+..+.. ..+.
T Consensus 75 ~N~ylv~~-~~~~ilIDtg~~~~~~~~l~~~i~~----~~~~~I~~Ii~TH~H~DH~gg~~~l~~-----------~~~~ 138 (270)
T 4eyb_A 75 SNGLIVRD-GGRVLVVDTAWTDDQTAQILNWIKQ----EINLPVALAVVTHAHQDKMGGMDALHA-----------AGIA 138 (270)
T ss_dssp EEEEEEEE-TTEEEEESCCSSHHHHHHHHHHHHH----HTCCCEEEEEECSSSHHHHTTHHHHHH-----------TTCE
T ss_pred eEEEEEEE-CCEEEEEeCCCCHHHHHHHHHHHHH----hcCCceEEEEeCCCChhhcCcHHHHHH-----------CCCe
Confidence 35777765 7889999999653 2233331100 001469999999999999999987732 1367
Q ss_pred EEeCchHHHHHH
Q 002976 588 VVGPGPLKRYLD 599 (861)
Q Consensus 588 I~~p~~~~~~L~ 599 (861)
+|+.+...+++.
T Consensus 139 v~~~~~~~~~~~ 150 (270)
T 4eyb_A 139 TYANALSNQLAP 150 (270)
T ss_dssp EEEEHHHHHHGG
T ss_pred EEECHHHHHHHH
Confidence 888877666554
No 106
>2ohh_A Type A flavoprotein FPRA; beta-lactamase like domain, flavodoxine like domain, oxidore; HET: FMN; 1.70A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 2ohi_A* 2ohj_A*
Probab=98.16 E-value=4.2e-06 Score=93.74 Aligned_cols=116 Identities=10% Similarity=0.001 Sum_probs=76.2
Q ss_pred CcEEEEEeCCcEEEEEcChh--H---HHHHHHcCC---CcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEc
Q 002976 59 SPSVLLFFDNQRFIFNAGEG--L---QRFCTEHKI---KLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeG--t---qr~l~~~~i---~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyG 130 (861)
.+|++|..++..+|||+|.+ . ...+.+. + ...++++||+||.|+||++|++.+.... + .+.||+
T Consensus 35 ~n~~li~~~~~~iLiD~g~~~~~~~~~~~l~~~-~~~~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----p--~~~v~~ 106 (404)
T 2ohh_A 35 YNAYLVCGDEGVALIDNSYPGTFDELMARVEDA-LQQVGMERVDYIIQNHVEKDHSGVLVELHRRF-----P--EAPIYC 106 (404)
T ss_dssp ECCEEEECSSCEEEECCCCTTCHHHHHHHHHHH-HHHHTCCCCCEEECSCCSHHHHTTHHHHHHHS-----T--TCCEEE
T ss_pred EEEEEEEeCCcEEEEeCCCCccHHHHHHHHHHH-hccCCccCCCEEEeCCCCCcccchHHHHHHHC-----C--CCEEEE
Confidence 46888888888999999986 2 2334443 3 4568999999999999999999876532 1 245999
Q ss_pred CccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcC--CCCCCCCCCCCCCCee
Q 002976 131 PSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLK--PSCSDGSPVKPGETSV 208 (861)
Q Consensus 131 P~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~--h~~~~~~~~~~~~~s~ 208 (861)
++.....+.......... .... ...+..++.++.+++.++++ |+. .++
T Consensus 107 ~~~~~~~~~~~~~~~~~~---~~~~-----------------~~~g~~~~~g~~~i~~~~~p~gH~~----------~~~ 156 (404)
T 2ohh_A 107 TEVAVKGLLKHYPSLREA---EFMT-----------------VKTGDVLDLGGKTLTFLETPLLHWP----------DSM 156 (404)
T ss_dssp CHHHHHHHHHHCGGGGGS---CEEE-----------------CCTTCEEECSSCEEEEEECTTSSST----------TCE
T ss_pred CHHHHHHHHHHhcccccC---CceE-----------------cCCCCEEEECCEEEEEEeCCCCCCC----------Cce
Confidence 988776665432110000 0011 12233455567788888887 753 678
Q ss_pred EEEE
Q 002976 209 IYVC 212 (861)
Q Consensus 209 gY~~ 212 (861)
+|.+
T Consensus 157 ~~~~ 160 (404)
T 2ohh_A 157 FTLL 160 (404)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8876
No 107
>1xm8_A Glyoxalase II; structural genomics, protein structure initiative, CESG, AT2G31350, metallo-hydrolase, zinc/iron binuclear center; 1.74A {Arabidopsis thaliana} SCOP: d.157.1.2 PDB: 2q42_A
Probab=98.15 E-value=2.6e-06 Score=89.10 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=49.2
Q ss_pred CCcEEEEEeC--CcEEEEEcChh--HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 58 TSPSVLLFFD--NQRFIFNAGEG--LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 58 ~~~slll~~~--~~~yLfD~GeG--tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
.+.|++|..+ +..+|||+|++ ....+.+.++ ++++|++||.|+||++|+..+.... .+.||+++.
T Consensus 11 ~n~~yli~~~~~~~~~lID~g~~~~i~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~~--------~~~v~~~~~ 79 (254)
T 1xm8_A 11 DNYAYILHDEDTGTVGVVDPSEAEPIIDSLKRSGR---NLTYILNTHHHYDHTGGNLELKDRY--------GAKVIGSAM 79 (254)
T ss_dssp TEEEEEEECTTTCCEEEECCSSHHHHHHHHHHHTC---CCCEEECSSCCHHHHTTHHHHHHHH--------CCEEEEEGG
T ss_pred CeEEEEEEECCCCEEEEEeCCCHHHHHHHHHHcCC---CccEEEECCCCCcccccHHHHHHHc--------CCeEEEchh
Confidence 3458888764 57899999976 3345666654 5899999999999999999877542 245888875
Q ss_pred H
Q 002976 134 L 134 (861)
Q Consensus 134 l 134 (861)
.
T Consensus 80 ~ 80 (254)
T 1xm8_A 80 D 80 (254)
T ss_dssp G
T ss_pred h
Confidence 4
No 108
>1e5d_A Rubredoxin\:oxygen oxidoreductase; oxygenreductase, DIIRON-centre, flavoproteins, lactamase-fold; HET: FMN; 2.5A {Desulfovibrio gigas} SCOP: c.23.5.1 d.157.1.3
Probab=98.14 E-value=3.5e-06 Score=94.34 Aligned_cols=74 Identities=16% Similarity=0.200 Sum_probs=55.8
Q ss_pred CcEEEEEeCCcEEEEEcChh--H---HHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 59 SPSVLLFFDNQRFIFNAGEG--L---QRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeG--t---qr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
.+|++|. ++..+|||||.+ . ...+.+. +...++++||+||.|+||++|++.+..... .+.||+++.
T Consensus 35 ~n~~li~-~~~~iliD~G~~~~~~~~~~~l~~~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~~-------~~~v~~~~~ 105 (402)
T 1e5d_A 35 YNAYLVE-DEKTTLFDTVKAEYKGELLCGIASV-IDPKKIDYLVIQHLELDHAGALPALIEACQ-------PEKIFTSSL 105 (402)
T ss_dssp EEEEEEC-SSSCEEECCCCGGGHHHHHHHHHTT-SCGGGCCEEEECCCSHHHHTTHHHHHHHHC-------CSEEEEEHH
T ss_pred eEEEEEE-CCCEEEEeCCCCccHHHHHHHHHHh-CCcccCCEEEeCCCCccccccHHHHHHHCC-------CCEEEEChH
Confidence 4688888 678999999986 2 2334444 567789999999999999999998875431 256999988
Q ss_pred HHHHHHHH
Q 002976 134 LKYLVDAM 141 (861)
Q Consensus 134 l~~~l~~~ 141 (861)
....+...
T Consensus 106 ~~~~~~~~ 113 (402)
T 1e5d_A 106 GQKAMESH 113 (402)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77766543
No 109
>1ycg_A Nitric oxide reductase; DIIRON site, oxidoreductase; HET: FMN; 2.80A {Moorella thermoacetica} SCOP: c.23.5.1 d.157.1.3 PDB: 1ycf_A* 1ych_A*
Probab=98.10 E-value=5.2e-06 Score=92.77 Aligned_cols=73 Identities=15% Similarity=0.150 Sum_probs=55.5
Q ss_pred CcEEEEEeCCcEEEEEcChh-----HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 59 SPSVLLFFDNQRFIFNAGEG-----LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeG-----tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
.+|++|. ++..+|||+|.+ ....+.+. +...+|++||+||.|+||++|++.++... + .+.||+++.
T Consensus 36 ~n~~li~-~~~~iliD~g~~~~~~~~~~~l~~~-~~~~~i~~iiiTH~H~DH~gg~~~l~~~~-----~--~~~v~~~~~ 106 (398)
T 1ycg_A 36 YNAYLIV-DDKTALVDTVYEPFKEELIAKLKQI-KDPVKLDYLVVNHTESDHAGAFPAIMELC-----P--DAHVLCTQR 106 (398)
T ss_dssp ECCEEEC-SSSCEEECCCCGGGHHHHHHHHHHH-CSSCCCSEEEESCCSHHHHTTHHHHHHHC-----T--TCEEEECHH
T ss_pred EEEEEEE-CCCEEEEeCCCcccHHHHHHHHHHh-cCcccCCEEEeCCCCcchhhhHHHHHHHC-----C--CCEEEEcHH
Confidence 4678887 457999999987 33445555 66778999999999999999999877532 1 356999988
Q ss_pred HHHHHHH
Q 002976 134 LKYLVDA 140 (861)
Q Consensus 134 l~~~l~~ 140 (861)
....+..
T Consensus 107 ~~~~l~~ 113 (398)
T 1ycg_A 107 AFDSLKA 113 (398)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 110
>2qed_A Hydroxyacylglutathione hydrolase; metallo-B- superfamily, salmonella typhimurium LT2; 1.45A {Salmonella typhimurium} SCOP: d.157.1.2
Probab=98.06 E-value=3e-06 Score=88.90 Aligned_cols=78 Identities=22% Similarity=0.333 Sum_probs=57.9
Q ss_pred eeEEEEEeeCCCCCCCCcEEEEEe-CCcEEEEEcChh--HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhcc
Q 002976 43 LSYVQILGTGMDTQDTSPSVLLFF-DNQRFIFNAGEG--LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGI 119 (861)
Q Consensus 43 ~~~l~~LGtgs~~~~~~~slll~~-~~~~yLfD~GeG--tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~ 119 (861)
.|+|..+..++ ...|++|.. ++..+|||+|.+ ....+.+.++ ++++|++||.|+||++|+..+....
T Consensus 7 ~m~i~~i~~~~----~n~~yli~~~~~~~vlID~G~~~~i~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~~--- 76 (258)
T 2qed_A 7 SMNLNSIPAFQ----DNYIWVLTNDEGRCVIVDPGEAAPVLKAIAEHKW---MPEAIFLTHHHHDHVGGVKELLQHF--- 76 (258)
T ss_dssp CCEEEEEEETT----TEEEEEEECTTSEEEEECCSCHHHHHHHHHHHTC---EEEEEECCSCCHHHHTTHHHHHHHC---
T ss_pred ccEEEEecccC----ceEEEEEEECCCcEEEEeCCCcHHHHHHHHHcCC---CCCEEEeCCCCccccCCHHHHHHHC---
Confidence 37888887653 345788876 577999999986 4455666665 6899999999999999998876432
Q ss_pred CCCCCcEEEEcCccH
Q 002976 120 GDEGLSVNVWGPSDL 134 (861)
Q Consensus 120 ~~~~~~l~IyGP~gl 134 (861)
+ ...||+++..
T Consensus 77 ~----~~~v~~~~~~ 87 (258)
T 2qed_A 77 P----QMTVYGPAET 87 (258)
T ss_dssp T----TCEEEECGGG
T ss_pred C----CCEEEecccc
Confidence 1 2568998753
No 111
>1m2x_A Class B carbapenemase BLAB-1; alpha-beta/BETA-alpha fold., hydrolase; HET: MCO; 1.50A {Elizabethkingia meningoseptica} SCOP: d.157.1.1
Probab=98.04 E-value=1e-05 Score=82.66 Aligned_cols=69 Identities=14% Similarity=0.128 Sum_probs=51.6
Q ss_pred CcEEEEEeCCcEEEEEcChh------HHHHHHHc-CCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcC
Q 002976 59 SPSVLLFFDNQRFIFNAGEG------LQRFCTEH-KIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGP 131 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeG------tqr~l~~~-~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP 131 (861)
.+|++|..++..+|||+|.+ ....+.+. + .++++||+||.|+||++|+..+.. . .+.||++
T Consensus 27 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~g---~~i~~vi~TH~H~DH~gg~~~~~~-------~--~~~v~~~ 94 (223)
T 1m2x_A 27 ANAVYLVTDKGVVVIDCPWGEDKFKSFTDEIYKKHG---KKVIMNIATHSHDDRAGGLEYFGK-------I--GAKTYST 94 (223)
T ss_dssp EEEEEEEETTEEEEESCCSSGGGHHHHHHHHHHHHC---CCEEEEECSSSSTTTTTTHHHHHH-------T--TCEEEEE
T ss_pred ccEEEEEeCCEEEEEeCCCChhHHHHHHHHHHHHhC---CCeEEEEeccCCccccCchhhHhh-------C--CCeEEEc
Confidence 56899998899999999953 22334443 4 368999999999999999987653 1 2569999
Q ss_pred ccHHHHHH
Q 002976 132 SDLKYLVD 139 (861)
Q Consensus 132 ~gl~~~l~ 139 (861)
+.....+.
T Consensus 95 ~~~~~~~~ 102 (223)
T 1m2x_A 95 KMTDSILA 102 (223)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87666554
No 112
>4b87_A DNA cross-LINK repair 1A protein; dclre1A, DCLRE, interstrand crosslink repair, hydrolase, NIT mustard, cancer, chemotherapy, PSO2 homolog,; HET: DNA; 2.16A {Homo sapiens}
Probab=98.03 E-value=1.6e-06 Score=95.46 Aligned_cols=110 Identities=13% Similarity=0.027 Sum_probs=74.0
Q ss_pred CCCCCcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccH
Q 002976 55 TQDTSPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDL 134 (861)
Q Consensus 55 ~~~~~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl 134 (861)
.++...++++..++..+++|+..- -.+.+|++|||||.|.||++||+. . . .+.||+++.+
T Consensus 23 ~~~~~~p~~~~~pG~~ilVD~f~~---------~~~~~IdaI~lTH~H~DHiggl~~--------~-~--~~pIy~s~~t 82 (367)
T 4b87_A 23 SRKKTCPFYKKIPGTGFTVDAFQY---------GVVEGCTAYFLTHFHSDHYAGLSK--------H-F--TFPVYCSEIT 82 (367)
T ss_dssp CCCCCCCGGGBCTTSSEEESCCSS---------SSCTTCCEEECCCCCHHHHTTCST--------T-C--CSCEEECHHH
T ss_pred CCCCCCceEEEECCCeEEEeCCCc---------CCccCCcEEEECcChHHHhCCccc--------c-c--CCcEEECHHH
Confidence 344444555567889999998532 245689999999999999999982 1 1 2459999988
Q ss_pred HHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcCCCCCCCCCCCCCCCeeEEEEEe
Q 002976 135 KYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCEL 214 (861)
Q Consensus 135 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~h~~~~~~~~~~~~~s~gY~~~~ 214 (861)
..++........ . ....+ ..+..+..++++|++++..|.. .+++|+|+.
T Consensus 83 ~~ll~~~l~~~~-~---~~~~l-----------------~~g~~~~ig~~~v~~~~agH~~----------gs~~~~i~~ 131 (367)
T 4b87_A 83 GNLLKNKLHVQE-Q---YIHPL-----------------PLDTECIVNGVKVVLLDANHCP----------GAVMILFYL 131 (367)
T ss_dssp HHHHHHHSCCCG-G---GEEEC-----------------CBTSCEEETTEEEEEEECSSST----------TCEEEEEEC
T ss_pred HHHHHHHhcccc-c---eEEEe-----------------CCCCEEEECCEEEEEEeCCCcC----------CcEEEEEEc
Confidence 877765432110 0 01111 1122345578999999999963 789999986
Q ss_pred C
Q 002976 215 P 215 (861)
Q Consensus 215 ~ 215 (861)
+
T Consensus 132 ~ 132 (367)
T 4b87_A 132 P 132 (367)
T ss_dssp T
T ss_pred C
Confidence 3
No 113
>2p18_A Glyoxalase II; metalloprotein, beta sandwich, alpha-helical domain, hydrola; HET: SPD; 1.80A {Leishmania infantum} PDB: 2p1e_A*
Probab=98.01 E-value=2.2e-05 Score=84.57 Aligned_cols=85 Identities=16% Similarity=0.132 Sum_probs=56.4
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEe--CCcEEEEEcC-hh--HHHHHHHc----CCC--cCCCCEEEECcCCcCccCcHHHH
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFF--DNQRFIFNAG-EG--LQRFCTEH----KIK--LSKVDHIFLSRVCSETAGGLPGL 112 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~--~~~~yLfD~G-eG--tqr~l~~~----~i~--~~ki~~IFiTH~H~DHi~GLpgl 112 (861)
|+|..+.+.+ .+.|++|.. ++..+|||+| .+ ....+.+. +++ +.+|++||+||.|+||++|+..|
T Consensus 29 m~i~~i~~~~----~n~~ylI~~~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~~~i~~IllTH~H~DH~gg~~~l 104 (311)
T 2p18_A 29 FSVTVVPTLK----DNFSYLINDHTTHTLAAVDVNADYKPILTYIEEHLKQQGNADVTYTFSTILSTHKHWDHSGGNAKL 104 (311)
T ss_dssp EEEEEEEETT----TEEEEEEEETTTTEEEEESCCSCCHHHHHHHHHTC--------CCEEEEEEESSSSHHHHTTHHHH
T ss_pred cEEEEEecCC----CcEEEEEEeCCCCcEEEEeCCCChHHHHHHHHHHHhhcCCCCCCCCccEEEeCCCCccccCCHHHH
Confidence 6777776642 345888887 5789999996 43 34455555 431 34789999999999999999988
Q ss_pred HHHHhccCCCCCcEEEEcCcc
Q 002976 113 LLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 113 l~t~~~~~~~~~~l~IyGP~g 133 (861)
........ ....+.||+++.
T Consensus 105 ~~~~~~~~-~~~~~~v~~~~~ 124 (311)
T 2p18_A 105 KAELEAMN-STVPVVVVGGAN 124 (311)
T ss_dssp HHHHHSCC---CCCEEEEEGG
T ss_pred HHhhhhcc-cCCCCEEEEech
Confidence 76542111 111356888864
No 114
>3tp9_A Beta-lactamase and rhodanese domain protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.70A {Alicyclobacillus acidocaldarius subsp}
Probab=97.98 E-value=4.6e-06 Score=95.63 Aligned_cols=126 Identities=6% Similarity=0.004 Sum_probs=78.7
Q ss_pred eEEEEEeeCCCCCCCCcEEEE--EeCCcEEEEEcChhHHH---HHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhc
Q 002976 44 SYVQILGTGMDTQDTSPSVLL--FFDNQRFIFNAGEGLQR---FCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAG 118 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll--~~~~~~yLfD~GeGtqr---~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~ 118 (861)
|+++.+-.|. -..+|++| ..++..+|||+|.+..+ .+.+.++ ++++||+||.|+||++|+..|....
T Consensus 4 m~i~~~~~~~---~~~n~yli~~~~~~~~ilID~g~~~~~~~~~l~~~~~---~i~~Il~TH~H~DH~gg~~~l~~~~-- 75 (474)
T 3tp9_A 4 MYLRRFYDEG---LAHASYLVGCQETGEACVIDPARDVEPYLLTAKREGL---RIVAALETHIHADFVSGAREMADRA-- 75 (474)
T ss_dssp EEEEEEEETT---TTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTC---EEEEEECSSCCSSSCCCHHHHHHHH--
T ss_pred eEEEEEecCC---ceeEEEEEEECCCCEEEEEcCCCChHHHHHHHHHcCC---eeEEEEcCcCchhhhCCHHHHHHHH--
Confidence 7777776653 13568888 45788999999976544 3445554 5899999999999999999887542
Q ss_pred cCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcC-CCCCC
Q 002976 119 IGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLK-PSCSD 197 (861)
Q Consensus 119 ~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~-h~~~~ 197 (861)
.+.||.++.....+.. .+... ..... ...+..+..++++|+.+.++ |+
T Consensus 76 ------~~~i~~~~~~~~~~~~--~~~~~---~~~~~-----------------~~~g~~~~~g~~~i~~i~tPGHt--- 124 (474)
T 3tp9_A 76 ------GAAICVSDEGPPEWKS--EYVKA---YPHRL-----------------LKDGDELHFGNVRIVVMHTPGHT--- 124 (474)
T ss_dssp ------CCEEEEECCSCGGGCC--GGGGG---SSEEE-----------------ECTTCEEEETTEEEEEEECCSSS---
T ss_pred ------CCcEEEcCcchhhhcc--ccccc---ccceE-----------------CCCCCEEEECCEEEEEEECCCCC---
Confidence 2447765543211100 00000 00000 12233556677888888876 54
Q ss_pred CCCCCCCCCeeEEEEEeC
Q 002976 198 GSPVKPGETSVIYVCELP 215 (861)
Q Consensus 198 ~~~~~~~~~s~gY~~~~~ 215 (861)
..+++|.+...
T Consensus 125 -------~g~~~~~~~~~ 135 (474)
T 3tp9_A 125 -------PEHVSYLLYDG 135 (474)
T ss_dssp -------SSCEEEEEEET
T ss_pred -------CCCEEEEEecC
Confidence 47899998754
No 115
>1p9e_A Methyl parathion hydrolase; Zn containing; 2.40A {Pseudomonas SP} SCOP: d.157.1.5
Probab=97.97 E-value=3e-06 Score=92.38 Aligned_cols=73 Identities=14% Similarity=0.109 Sum_probs=56.9
Q ss_pred cEEEEEeCCcEEEEEcChh---------HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEc
Q 002976 60 PSVLLFFDNQRFIFNAGEG---------LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130 (861)
Q Consensus 60 ~slll~~~~~~yLfD~GeG---------tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyG 130 (861)
+|++|..++..+|||+|.+ ....+.+.++++.+|+.|++||.|+||++|+..++ ...- . ...||.
T Consensus 98 n~~LI~~~~~~iLIDtG~~~~~~~~~~~l~~~L~~~Gi~~~~Id~VilTH~H~DHiggl~~~~---~~~f-p--~a~v~~ 171 (331)
T 1p9e_A 98 TGYLVNTGSKLVLVDTGAAGLFGPTLGRLAANLKAAGYQPEQVDEIYITHMHPDHVGGLMVGE---QLAF-P--NAVVRA 171 (331)
T ss_dssp EEEEEECSSCEEEECCCCTTSSCTTCCCHHHHHHHTTCCGGGCCEEECSCCCHHHHGGGEETT---EESS-T--TCEEEC
T ss_pred EEEEEEECCEEEEEECCCCCcCCcchhHHHHHHHHcCCCHHHCCEEEeCCcccccCCcccccc---cccC-C--CCEEEE
Confidence 3899998999999999987 66778888999999999999999999999996321 0000 1 356999
Q ss_pred CccHHHHH
Q 002976 131 PSDLKYLV 138 (861)
Q Consensus 131 P~gl~~~l 138 (861)
++....++
T Consensus 172 ~~~~~~~~ 179 (331)
T 1p9e_A 172 DQKEADFW 179 (331)
T ss_dssp BHHHHHHH
T ss_pred CHHHHHHH
Confidence 87665544
No 116
>1mqo_A Beta-lactamase II; alpha-beta/BETA-alpha fold, hydrolase; HET: CIT; 1.35A {Bacillus cereus} SCOP: d.157.1.1 PDB: 1bc2_A 1bvt_A* 3i0v_A 3i11_A 3i13_A 3i14_A 3i15_A 2uyx_A 2bc2_A 3bc2_A 2bfl_A 2bfk_A 2bfz_B 2bg2_A 2bg7_A 2bg8_A 1dxk_A 3kns_A 3knr_A 2bfz_A ...
Probab=97.95 E-value=2.2e-05 Score=80.40 Aligned_cols=70 Identities=10% Similarity=0.158 Sum_probs=52.0
Q ss_pred CcEEEEEeCCcEEEEEcChhHH------HHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 59 SPSVLLFFDNQRFIFNAGEGLQ------RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGtq------r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
.+|++|..++..+|||||.+.. ..+.+.. ..++++|++||.|+||++|+..+... .+.||+++
T Consensus 41 ~n~~li~~~~~~iliD~G~~~~~~~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~l~~~---------~~~v~~~~ 109 (227)
T 1mqo_A 41 SNGLVLNTSKGLVLVDSSWDDKLTKELIEMVEKKF--QKRVTDVIITHAHADRIGGIKTLKER---------GIKAHSTA 109 (227)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHH--TSCEEEEECCCCSHHHHTTHHHHHHH---------TCEEECBH
T ss_pred ceEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhc--CCCceEEEeCCCCchhccchHHHhhC---------CcEEEecc
Confidence 4688998889999999998752 2233321 45799999999999999999887642 25599987
Q ss_pred cHHHHHH
Q 002976 133 DLKYLVD 139 (861)
Q Consensus 133 gl~~~l~ 139 (861)
.....+.
T Consensus 110 ~~~~~~~ 116 (227)
T 1mqo_A 110 LTAELAK 116 (227)
T ss_dssp HHHHHHH
T ss_pred chHHHHH
Confidence 6655443
No 117
>1qh5_A Glyoxalase II, protein (hydroxyacylglutathione hydrolase); metallo-hydrolase; HET: GSH GBP; 1.45A {Homo sapiens} SCOP: d.157.1.2 PDB: 1qh3_A*
Probab=97.95 E-value=7.1e-06 Score=86.08 Aligned_cols=75 Identities=17% Similarity=0.221 Sum_probs=54.3
Q ss_pred eEEEEEeeCCCCCCCCcEEEEEeC--CcEEEEEcChh--HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhcc
Q 002976 44 SYVQILGTGMDTQDTSPSVLLFFD--NQRFIFNAGEG--LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGI 119 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~~~--~~~yLfD~GeG--tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~ 119 (861)
|+|..+-+|. ...|++|..+ +..+|||+|.+ ....+.+.++ ++++|++||.|+||++|+..+.....
T Consensus 1 m~i~~i~~~~----~n~~yli~~~~~~~~vlID~G~~~~i~~~l~~~g~---~i~~IllTH~H~DH~gg~~~l~~~~~-- 71 (260)
T 1qh5_A 1 MKVEVLPALT----DNYMYLVIDDETKEAAIVDPVQPQKVVDAARKHGV---KLTTVLTTHHHWDHAGGNEKLVKLES-- 71 (260)
T ss_dssp CEEEEEEETT----TEEEEEEEETTTTEEEEESCSSHHHHHHHHHHHTC---EEEEEECCCSSHHHHTTHHHHHHHST--
T ss_pred CEEEEEEecC----ceEEEEEEECCCCEEEEEcCCCHHHHHHHHHHcCC---CccEEEeCCCCccccCCHHHHHHHCC--
Confidence 4566666653 3458888764 67899999976 3345666665 38899999999999999998765321
Q ss_pred CCCCCcEEEEcCc
Q 002976 120 GDEGLSVNVWGPS 132 (861)
Q Consensus 120 ~~~~~~l~IyGP~ 132 (861)
.+.||+++
T Consensus 72 -----~~~v~~~~ 79 (260)
T 1qh5_A 72 -----GLKVYGGD 79 (260)
T ss_dssp -----TCEEEESC
T ss_pred -----CCEEEECc
Confidence 25588875
No 118
>1a7t_A Metallo-beta-lactamase; hydrolase (beta-lactamase), zinc; HET: MES; 1.85A {Bacteroides fragilis} SCOP: d.157.1.1 PDB: 1a8t_A* 2bmi_A 1kr3_A 1znb_A 2znb_A 3znb_A 4znb_A 1hlk_A*
Probab=97.94 E-value=1e-05 Score=83.18 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=52.5
Q ss_pred CcEEEEEeCCcEEEEEcChhH------HHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 59 SPSVLLFFDNQRFIFNAGEGL------QRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGt------qr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
.+|++|..++..+|||+|.+. ...+.+.+ ..++++|++||.|+||++|+..+.. . .+.||+++
T Consensus 37 ~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~--~~~i~~ii~TH~H~DH~gg~~~~~~-------~--~~~v~~~~ 105 (232)
T 1a7t_A 37 SNGMIVINNHQAALLDTPINDAQTEMLVNWVTDSL--HAKVTTFIPNHWHGDCIGGLGYLQR-------K--GVQSYANQ 105 (232)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHH--CCEEEEEECSSSSHHHHTTHHHHHH-------T--TCEEEEEH
T ss_pred ceEEEEEeCCEEEEEeCCCCHHHHHHHHHHHHHhc--CCCeEEEEeCCCCccccCCHHHHHh-------C--CCeEEEcH
Confidence 468899888999999999652 22333332 3478999999999999999987753 1 25699998
Q ss_pred cHHHHHHH
Q 002976 133 DLKYLVDA 140 (861)
Q Consensus 133 gl~~~l~~ 140 (861)
....++..
T Consensus 106 ~~~~~~~~ 113 (232)
T 1a7t_A 106 MTIDLAKE 113 (232)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 77666543
No 119
>2zo4_A Metallo-beta-lactamase family protein; hydrolase; 2.10A {Thermus thermophilus}
Probab=97.92 E-value=4.7e-06 Score=90.10 Aligned_cols=75 Identities=13% Similarity=-0.010 Sum_probs=58.1
Q ss_pred CCCcEEEEEeCCcEEEEEcChhH-------HHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEE
Q 002976 57 DTSPSVLLFFDNQRFIFNAGEGL-------QRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVW 129 (861)
Q Consensus 57 ~~~~slll~~~~~~yLfD~GeGt-------qr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~Iy 129 (861)
+..+|++|..++..+|||+|.+. ...+.+.++.+.+|++|++||.|+||++|+..+... .+.||
T Consensus 20 ~~~n~~li~~~~~~ilID~G~~~~~~~~~l~~~l~~~g~~~~~i~~Vi~TH~H~DH~gg~~~l~~~---------~~~v~ 90 (317)
T 2zo4_A 20 KTVNLYLLQGAGEVALVDTALGTRAARGALELHLAELGLCFQDVKTILLTHHHPDHYGLSGFFEGL---------GARVF 90 (317)
T ss_dssp CEEEEEEEEETTEEEEECCCCSSHHHHHHHHHHHHHTTCCGGGCCEEEESCCSHHHHTTHHHHHHT---------TCEEE
T ss_pred CcEEEEEEEcCCceEEEECCCCCHHHHHHHHHHHHHcCCChhhcCEEEEcCCCCcccccHHHHHhC---------CCEEE
Confidence 35678889888889999999764 234566788888899999999999999999877531 24588
Q ss_pred cCccHHHHHHH
Q 002976 130 GPSDLKYLVDA 140 (861)
Q Consensus 130 GP~gl~~~l~~ 140 (861)
+++.....+..
T Consensus 91 ~~~~~~~~~~~ 101 (317)
T 2zo4_A 91 LHEEEFARGHR 101 (317)
T ss_dssp EEGGGTTTHHH
T ss_pred EcHHHHHHHHh
Confidence 88876655543
No 120
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=97.92 E-value=9.1e-06 Score=81.72 Aligned_cols=67 Identities=15% Similarity=0.118 Sum_probs=46.0
Q ss_pred CccEEEEEEeCCceEEEeCCcchHHHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCeEE
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEGTLGQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPLLV 588 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGegt~~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl~I 588 (861)
.++|++|+. +++.+|||||.... .+.+.+. .+.+|++|++||. ||++|+..+... .+..|
T Consensus 23 ~~n~~li~~-~~~~iliD~g~~~~-~~~~~l~------~~g~i~~ii~TH~--DH~gg~~~~~~~----------~~a~v 82 (201)
T 2p97_A 23 DFNGFAWIR-PEGNILIDPVALSN-HDWKHLE------SLGGVVWIVLTNS--DHVRSAKEIADQ----------TYTKI 82 (201)
T ss_dssp EEEEEEECC-TTCCEEESCCCCCH-HHHHHHH------HTTCCSEEECSSG--GGCTTHHHHHHH----------SCCEE
T ss_pred ceeEEEEEe-CCeeEEEECCCCcH-HHHHHHH------hcCCCCEEEECCc--hhhhhHHHHHHh----------cCCEE
Confidence 367888876 67799999995432 2222111 1237999999999 999999987543 13678
Q ss_pred EeCchHH
Q 002976 589 VGPGPLK 595 (861)
Q Consensus 589 ~~p~~~~ 595 (861)
|+++...
T Consensus 83 ~~~~~~~ 89 (201)
T 2p97_A 83 AGPVAEK 89 (201)
T ss_dssp EEEGGGT
T ss_pred EEcHhHh
Confidence 8876543
No 121
>3esh_A Protein similar to metal-dependent hydrolase; structural genomics, PSI-2, protein structure initiative; 2.50A {Staphylococcus aureus subsp}
Probab=97.88 E-value=4.1e-06 Score=88.91 Aligned_cols=74 Identities=15% Similarity=0.094 Sum_probs=56.2
Q ss_pred cEEEEEeCCcEEEEEcChh-------------------HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccC
Q 002976 60 PSVLLFFDNQRFIFNAGEG-------------------LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIG 120 (861)
Q Consensus 60 ~slll~~~~~~yLfD~GeG-------------------tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~ 120 (861)
+|++|..++..+|||||.+ ....+.+.++++.+|++||+||.|+||++|++.+... ..
T Consensus 49 n~~lI~~~~~~iLID~G~~~~~~~~~~~~~~~~~~~~~l~~~l~~~g~~~~~Id~IllTH~H~DHigg~~~l~~~---~~ 125 (280)
T 3esh_A 49 HPILIQTAQYNLIIDAGIGNGKLSEKQLRNFGVDEESHIIADLANYNLTPKDIDYVLMTHMHFDHAAGLTDQAGH---AI 125 (280)
T ss_dssp CCEEEECSSCEEESCCTTCSSCSCHHHHHHTTCSSCCCHHHHHHTTTCCTTSCCEEECSCCCHHHHGGGSCTTSC---CS
T ss_pred EEEEEEECCEEEEEECCCCCcccccccccccCCcccchHHHHHHHcCCCHHHCCEEEeCCCcccccCcccccccc---cC
Confidence 4899999999999999965 3456777889999999999999999999999765420 00
Q ss_pred CCCCcEEEEcCccHHHHH
Q 002976 121 DEGLSVNVWGPSDLKYLV 138 (861)
Q Consensus 121 ~~~~~l~IyGP~gl~~~l 138 (861)
-+ ...||+++....++
T Consensus 126 fp--~a~i~~~~~~~~~~ 141 (280)
T 3esh_A 126 FE--NAIHVVQQDEWHEF 141 (280)
T ss_dssp ST--TCEEEEEHHHHHHH
T ss_pred CC--CCEEEECHHHHHHh
Confidence 01 35688887655544
No 122
>2vw8_A PA1000, PQSE; quinolone signal response protein, signaling protein, SSPF; 1.45A {Pseudomonas aeruginosa PAO1} PDB: 2q0j_A 2q0i_A 3dh8_A*
Probab=97.79 E-value=1.6e-05 Score=85.27 Aligned_cols=73 Identities=18% Similarity=0.147 Sum_probs=53.4
Q ss_pred CCcEEEE-EeCCcEEEEEcChhH--H---HHHHHcCC-CcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEc
Q 002976 58 TSPSVLL-FFDNQRFIFNAGEGL--Q---RFCTEHKI-KLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130 (861)
Q Consensus 58 ~~~slll-~~~~~~yLfD~GeGt--q---r~l~~~~i-~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyG 130 (861)
..+|++| ..++..+|||+|.+. . +.+.+. + ...+|++|++||.|+||++|+..+.... . ...||+
T Consensus 23 ~~n~~li~~~~~~~iLID~G~~~~~~~~~~~l~~~-~~~~~~i~~Ii~TH~H~DH~gg~~~l~~~~-----~--~a~v~~ 94 (303)
T 2vw8_A 23 QVPVFLLRLGEASWALVEGGISRDAELVWADLCRW-VADPSQVHYWLITHKHYDHCGLLPYLCPRL-----P--NVQVLA 94 (303)
T ss_dssp TSCEEEEEEETTEEEEECCCCGGGHHHHHHHHHHH-CSCGGGEEEEECCCCSTTTTTTHHHHGGGC-----T--TCEEEE
T ss_pred CceEEEEEeCCCceEEEECCCCCcHHHHHHHHHHH-hcCcccceEEEeccCCccccCCHHHHHHhC-----C--CCeEEE
Confidence 4678888 478889999999863 2 334443 3 5568999999999999999998875311 1 356999
Q ss_pred CccHHHHH
Q 002976 131 PSDLKYLV 138 (861)
Q Consensus 131 P~gl~~~l 138 (861)
++.....+
T Consensus 95 ~~~~~~~~ 102 (303)
T 2vw8_A 95 SERTCQAW 102 (303)
T ss_dssp EHHHHHHT
T ss_pred CHHHHHHH
Confidence 88766544
No 123
>4hl2_A Beta-lactamase NDM-1; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: ZZ7; 1.05A {Klebsiella pneumoniae} PDB: 4hl1_A* 4h0d_A* 4gyu_A* 4gyq_A 3q6x_A* 3spu_A 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=97.77 E-value=6.7e-06 Score=85.25 Aligned_cols=69 Identities=9% Similarity=0.195 Sum_probs=51.1
Q ss_pred CcEEEEEeCCcEEEEEcCh---h---HHHHHHHc-CCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcC
Q 002976 59 SPSVLLFFDNQRFIFNAGE---G---LQRFCTEH-KIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGP 131 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~Ge---G---tqr~l~~~-~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP 131 (861)
.+|++|..++..+|||||. . ..+.+.+. +. ++++||+||.|+||++|++.+... .+.||++
T Consensus 48 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~~~---~i~~vi~TH~H~DH~gg~~~l~~~---------~~~v~~~ 115 (243)
T 4hl2_A 48 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINL---PVALAVVTHAHQDKMGGMDALHAA---------GIATYAN 115 (243)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCC---CEEEEEECSSSHHHHTTHHHHHHT---------TCEEEEE
T ss_pred ceEEEEEECCcEEEEECCCCCccHHHHHHHHHHhhCC---CeeEEEECCCCccccCCHHHHHhC---------CCeEEEC
Confidence 5689999899999999993 2 22334443 43 589999999999999999987531 2559998
Q ss_pred ccHHHHHH
Q 002976 132 SDLKYLVD 139 (861)
Q Consensus 132 ~gl~~~l~ 139 (861)
+....++.
T Consensus 116 ~~~~~~~~ 123 (243)
T 4hl2_A 116 ALSNQLAP 123 (243)
T ss_dssp HHHHHHGG
T ss_pred HHHHHHHh
Confidence 76655543
No 124
>3iog_A Beta-lactamase; hydrolase, antibiotic resistance, metal-binding; HET: SDF; 1.41A {Aeromonas hydrophila} SCOP: d.157.1.1 PDB: 1x8i_A 3fai_A* 3iof_A* 1x8h_A 2qds_A* 2gkl_A* 1x8g_A* 3f9o_A 3t9m_A 3sw3_A
Probab=97.77 E-value=1.5e-05 Score=81.49 Aligned_cols=74 Identities=14% Similarity=0.082 Sum_probs=53.7
Q ss_pred CCcEEEEEeCCcEEEEEcChhH--HHHHHH--cCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEGL--QRFCTE--HKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeGt--qr~l~~--~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
..+|++|..++..+|||+|.+. ...+.+ ..+...+|+.|++||.|+||++|+..+.. . .+.||+++.
T Consensus 22 ~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~l~~-------~--~~~v~~~~~ 92 (227)
T 3iog_A 22 QENSMVYFGAKGVTVVGATWTPDTARELHKLIKRVSRKPVLEVINTNYHTDRAGGNAYWKS-------I--GAKVVSTRQ 92 (227)
T ss_dssp CEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHTTCCSCEEEEECSSSSHHHHTTHHHHHH-------T--TCEEEEEHH
T ss_pred cCcEEEEEeCCeEEEEECCCChHHHHHHHHHHHHhcCCCeEEEEeCCCchhhcChHHHHhh-------C--CCeEEECHH
Confidence 4578889888899999999632 112211 12456789999999999999999988642 1 255899887
Q ss_pred HHHHHHH
Q 002976 134 LKYLVDA 140 (861)
Q Consensus 134 l~~~l~~ 140 (861)
...++..
T Consensus 93 ~~~~~~~ 99 (227)
T 3iog_A 93 TRDLMKS 99 (227)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 125
>4ad9_A Lactb2, beta-lactamase-like protein 2; hydrolase, metallo-beta lactamase, mitochondria; 2.60A {Homo sapiens}
Probab=97.73 E-value=2.2e-05 Score=83.65 Aligned_cols=80 Identities=18% Similarity=0.295 Sum_probs=54.9
Q ss_pred EEEEeeC-CCC-CCCCcEEEEEeCCcEEEEEcChh--------HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHH
Q 002976 46 VQILGTG-MDT-QDTSPSVLLFFDNQRFIFNAGEG--------LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLT 115 (861)
Q Consensus 46 l~~LGtg-s~~-~~~~~slll~~~~~~yLfD~GeG--------tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t 115 (861)
.+++|.. ++. .+..+|++|..++..+|||+|.+ ....+.+.+. ++++||+||.|+||++|++.+...
T Consensus 17 ~~v~g~~p~p~~~~~~n~~li~~~~~~ilID~G~~~~~~~~~~l~~~l~~~~~---~i~~Ii~TH~H~DH~gg~~~l~~~ 93 (289)
T 4ad9_A 17 VRVLGCNPGPMTLQGTNTYLVGTGPRRILIDTGEPAIPEYISCLKQALTEFNT---AIQEIVVTHWHRDHSGGIGDICKS 93 (289)
T ss_dssp EEEECSCCBTTTBTCCEEEEECSSSSEEEECCCSTTCHHHHHHHHHHHHHTTC---CEEEEECSCSSHHHHTTHHHHHHH
T ss_pred EEEeCCCCCCCcCCceEEEEEecCCceEEEeCCCCCChHHHHHHHHHHHHcCC---CceEEEEcCCCCcccccHHHHHHh
Confidence 5666643 222 24568899988889999999964 2233444444 589999999999999999998754
Q ss_pred HhccCCCCCcEEEEcCc
Q 002976 116 LAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 116 ~~~~~~~~~~l~IyGP~ 132 (861)
... . ..+.||+++
T Consensus 94 ~~~--~--~~~~v~~~~ 106 (289)
T 4ad9_A 94 INN--D--TTYCIKKLP 106 (289)
T ss_dssp SCC--S--SCCCEEECC
T ss_pred hcc--C--CCceEEecC
Confidence 311 1 134577765
No 126
>3r2u_A Metallo-beta-lactamase family protein; structural genomics, for structural genomics of infectious diseases, csgid, HYDR; 2.10A {Staphylococcus aureus}
Probab=97.71 E-value=1.6e-05 Score=90.85 Aligned_cols=125 Identities=11% Similarity=0.135 Sum_probs=77.7
Q ss_pred eEEEEEeeCCCCCCCCcEEEEE--eCCcEEEEEcChhHHH---HHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhc
Q 002976 44 SYVQILGTGMDTQDTSPSVLLF--FDNQRFIFNAGEGLQR---FCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAG 118 (861)
Q Consensus 44 ~~l~~LGtgs~~~~~~~slll~--~~~~~yLfD~GeGtqr---~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~ 118 (861)
|.+..+-++. -..+|++|. .+++.+|||+|.+..+ .+.+.++ +|++||+||.|+||++|+..|....
T Consensus 25 m~i~~~~~~~---~~~nsyli~~~~~~~~vlID~g~~~~~~~~~l~~~g~---~i~~Il~TH~H~DH~gg~~~l~~~~-- 96 (466)
T 3r2u_A 25 MFFKQFYDKH---LSQASYLIGCQKTGEAMIIDPIRDLSSYIRVADEEGL---TITHAAETHIHADFASGIRDVAIKL-- 96 (466)
T ss_dssp EEEEEEEETT---TTEEEEEEEETTTCEEEEESCCSCCHHHHHHHHHHTC---EEEEEECSSCCSSSCCCHHHHHHHH--
T ss_pred eEEEEEecCC---ccceEEEEEeCCCCEEEEEcCCCCHHHHHHHHHHCCC---eeeEEEECCCChhhhccHHHHHHhh--
Confidence 6676665542 145688885 3678999999976544 3444454 4899999999999999998887543
Q ss_pred cCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCccCCCceeEeeCCcEEEEEEEcC-CCCCC
Q 002976 119 IGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSAKSANHIILVDNELAKISAILLK-PSCSD 197 (861)
Q Consensus 119 ~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~V~~~~l~-h~~~~ 197 (861)
.+.||+++.....+ .+. +.. . .. .....+..+..++++|+.+.++ |+
T Consensus 97 ------~a~v~~~~~~~~~~----~~~----------~~~--~---~~----~~~~~g~~l~~g~~~l~vi~tPGHT--- 144 (466)
T 3r2u_A 97 ------NANIYVSGESDDTL----GYK----------NMP--N---HT----HFVQHNDDIYVGNIKLKVLHTPGHT--- 144 (466)
T ss_dssp ------CCEEEEECCSCTTT----SCC----------SCC--T---TC----EEECTTCEEEETTEEEEEEECCSSS---
T ss_pred ------CCeEEECcchhhhh----ccc----------cCC--C---CC----EEeCCCCEEEECCEEEEEEECCCCC---
Confidence 14477766421110 000 000 0 00 0112334566678888888877 65
Q ss_pred CCCCCCCCCeeEEEEEeC
Q 002976 198 GSPVKPGETSVIYVCELP 215 (861)
Q Consensus 198 ~~~~~~~~~s~gY~~~~~ 215 (861)
..+++|.+...
T Consensus 145 -------~g~~~~~~~~~ 155 (466)
T 3r2u_A 145 -------PESISFLLTDE 155 (466)
T ss_dssp -------TTCEEEEEECG
T ss_pred -------CCCEEEEEcCC
Confidence 37899998653
No 127
>3q6v_A Beta-lactamase; metalloenzyme, alpha-beta, hydrolase; 1.37A {Serratia fonticola} PDB: 3sd9_A
Probab=97.69 E-value=1.5e-05 Score=81.77 Aligned_cols=75 Identities=11% Similarity=0.022 Sum_probs=54.3
Q ss_pred CCcEEEEEeCCcEEEEEcChhHH--HHHHHc--CCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEGLQ--RFCTEH--KIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeGtq--r~l~~~--~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
..+|++|..++..+|||+|.+.. ..+.+. ++...+++.|++||.|+||++|+..+.. . .+.||+++.
T Consensus 25 ~~n~~li~~~~~~iLiD~G~~~~~~~~~~~~l~~~~~~~i~~ii~TH~H~DH~gg~~~~~~-------~--~~~v~~~~~ 95 (233)
T 3q6v_A 25 QENSMVYIGTDGITIIGATWTPETAETLYKEIRKVSPLPINEVINTNYHTDRAGGNAYWKT-------L--GAKIVATQM 95 (233)
T ss_dssp CEEEEEEECSSCEEEESCCSSHHHHHHHHHHHHHHCCCCEEEEECSSSSHHHHTTHHHHHH-------T--TCEEEEEHH
T ss_pred CCcEEEEEeCCeEEEEECCCCHHHHHHHHHHHHHhcCCCcEEEEECCCChhhhChHHHHhh-------C--CCEEEEcHH
Confidence 45788888888999999997542 122111 2235679999999999999999988751 1 256999988
Q ss_pred HHHHHHHH
Q 002976 134 LKYLVDAM 141 (861)
Q Consensus 134 l~~~l~~~ 141 (861)
...++...
T Consensus 96 ~~~~~~~~ 103 (233)
T 3q6v_A 96 TYDLQKSQ 103 (233)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHhh
Confidence 77766543
No 128
>3hnn_A Putative diflavin flavoprotein A 5; PSI-2, protein structure initiative, northeast structural GE consortium, NESG, NSR435A, DFA5, electron transport; 1.80A {Nostoc SP} PDB: 4fek_A
Probab=97.67 E-value=2.5e-05 Score=82.03 Aligned_cols=73 Identities=14% Similarity=0.067 Sum_probs=53.7
Q ss_pred CcEEEEEeCCcEEEEEcChhHH-----HHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 59 SPSVLLFFDNQRFIFNAGEGLQ-----RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGtq-----r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
.+|++|.. +..+|||+|.+.. +.+.+. +...+|++|++||.|.||++|+..+..... .+.||+++.
T Consensus 43 ~N~yli~~-~~~iLID~G~~~~~~~~~~~l~~~-~~~~~i~~IilTH~H~DH~gg~~~l~~~~~-------~~~v~~~~~ 113 (262)
T 3hnn_A 43 SNSYVIEG-DKTAIIDPPVESFMKIYLEALQQT-VNLKKLDYVILGHFSPNRIPTFKALLELAP-------QITFVCSLP 113 (262)
T ss_dssp EEEEEEES-SSEEEECCCCHHHHHHHHHHHHHH-SCGGGEEEEECSSCCGGGHHHHHHHHHHCT-------TCEEEECHH
T ss_pred EEEEEEEC-CCEEEEECCCcchHHHHHHHHHHh-CChhhCCEEEECCCCcchhchHHHHHHHCC-------CCEEEECHH
Confidence 36778875 7899999997631 233333 556789999999999999999998864311 356999987
Q ss_pred HHHHHHH
Q 002976 134 LKYLVDA 140 (861)
Q Consensus 134 l~~~l~~ 140 (861)
...++..
T Consensus 114 ~~~~l~~ 120 (262)
T 3hnn_A 114 AAGDLRA 120 (262)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 129
>1jjt_A IMP-1 metallo beta-lactamase; metallo-beta-lactamase inhibitor, succinic acid inhibitor, I metallo-beta-lactamase, hydrolase; HET: BDS; 1.80A {Pseudomonas aeruginosa} SCOP: d.157.1.1 PDB: 1dd6_A* 1vgn_A* 2doo_A* 1wup_A 1wuo_A 1jje_A* 1ddk_A
Probab=97.67 E-value=1.9e-05 Score=81.01 Aligned_cols=69 Identities=13% Similarity=0.226 Sum_probs=50.5
Q ss_pred CcEEEEEeCCcEEEEEcChhH------HHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 59 SPSVLLFFDNQRFIFNAGEGL------QRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGt------qr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
.+|++|..++..+|||+|.+. ...+.+.++ +|+.|++||.|+||++|+..+.. . .+.||+++
T Consensus 33 ~n~~li~~~~~~iliD~g~~~~~~~~~~~~l~~~g~---~i~~ii~TH~H~DH~gg~~~l~~---~------~~~v~~~~ 100 (228)
T 1jjt_A 33 KHGLVVLVNAEAYLIDTPFTAKDTEKLVTWFVERGY---KIKGSISSHFHSDSTGGIEWLNS---R------SIPTYASE 100 (228)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHTTTC---EEEEEECSSSSHHHHTTHHHHHH---T------TCCEEEEH
T ss_pred ceEEEEEECCcEEEEeCCCChhhHHHHHHHHHHcCC---CeeEEEeCCCChhhhccHHHHHh---C------CCEEEECh
Confidence 468889888899999999642 233443333 68999999999999999987653 1 13488887
Q ss_pred cHHHHHH
Q 002976 133 DLKYLVD 139 (861)
Q Consensus 133 gl~~~l~ 139 (861)
....++.
T Consensus 101 ~~~~~~~ 107 (228)
T 1jjt_A 101 LTNELLK 107 (228)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 6665544
No 130
>2q9u_A A-type flavoprotein; flavodoxin like, beta lactamase like, oxidoreductase; HET: FMN; 1.90A {Giardia intestinalis}
Probab=97.65 E-value=6.6e-05 Score=84.27 Aligned_cols=73 Identities=8% Similarity=0.026 Sum_probs=53.3
Q ss_pred CcEEEEEeCCcEEEEEcChhH-----HHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCcc
Q 002976 59 SPSVLLFFDNQRFIFNAGEGL-----QRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGt-----qr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~g 133 (861)
.+|++|. ++..+|||+|.+. .+.+.+. +...+|++||+||.|.||++|+..+...+ . .+.||+++.
T Consensus 41 ~n~~li~-~~~~iLID~G~~~~~~~~~~~l~~~-~~~~~i~~ii~TH~H~DH~gg~~~l~~~~-----~--~~~v~~~~~ 111 (414)
T 2q9u_A 41 YNSYFID-DECPTVIDSVKYPFAEEWLSRIAAC-CPLDKIKYVVMNHAEGDHASSLKDHYHKF-----T--NATFVCTKK 111 (414)
T ss_dssp ECCEEEC-SSSCEEECCCCGGGHHHHHHHHHHH-SCGGGCCEEECSCCSGGGTTTHHHHGGGS-----T--TCEEEECHH
T ss_pred eeEEEEE-CCCEEEEeCCCcccHHHHHHHHHHh-cCcccCCEEEeCCCCcchhcCHHHHHHHC-----C--CCEEEECHH
Confidence 4578777 4789999999752 2334444 56678999999999999999998775321 1 356999988
Q ss_pred HHHHHHH
Q 002976 134 LKYLVDA 140 (861)
Q Consensus 134 l~~~l~~ 140 (861)
....+..
T Consensus 112 ~~~~~~~ 118 (414)
T 2q9u_A 112 CQEHLKI 118 (414)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7766654
No 131
>2y8b_A Metallo-B-lactamase; hydrolase, cephalosporins, antibiotic recognition; 1.70A {Pseudomonas aeruginosa} PDB: 2y8a_A 2y87_A 2yz3_A* 2whg_A* 2wrs_A* 1ko3_A 1ko2_A
Probab=97.64 E-value=3.4e-05 Score=81.15 Aligned_cols=69 Identities=12% Similarity=0.166 Sum_probs=51.4
Q ss_pred CcEEEEEeCCcEEEEEcChhH------HHHHHHc-CCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcC
Q 002976 59 SPSVLLFFDNQRFIFNAGEGL------QRFCTEH-KIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGP 131 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGt------qr~l~~~-~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP 131 (861)
.+|++|..++..+|||+|.+. ...+.+. +. +|++|++||.|+||++|+..+.. . ...||++
T Consensus 68 ~n~~li~~~~~~iLID~G~~~~~~~~l~~~l~~~~g~---~i~~VilTH~H~DH~gg~~~~~~----~-----~a~v~~~ 135 (265)
T 2y8b_A 68 SNGLIVRDADELLLIDTAWGAKNTVALLAEIEKQIGL---PVTRSISTHFHDDRVGGVDVLRA----A-----GVATYTS 135 (265)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCS---CEEEEECSSSSHHHHTTHHHHHH----T-----TCEEEEC
T ss_pred ceEEEEEECCeEEEEeCCCCHHHHHHHHHHHHHhcCC---CeEEEEeCCCChhhcCCHHHHhh----C-----CCeEEEC
Confidence 568888888999999999642 2234444 43 68999999999999999986653 1 2559999
Q ss_pred ccHHHHHH
Q 002976 132 SDLKYLVD 139 (861)
Q Consensus 132 ~gl~~~l~ 139 (861)
+....++.
T Consensus 136 ~~~~~~~~ 143 (265)
T 2y8b_A 136 PLTRQLAE 143 (265)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 87766654
No 132
>3h3e_A Uncharacterized protein TM1679; structural genomics, surface entropy reduction, ISFI, beta- lactamase superfamily, PSI-2; 2.75A {Thermotoga maritima}
Probab=97.63 E-value=2.8e-05 Score=81.32 Aligned_cols=74 Identities=22% Similarity=0.336 Sum_probs=56.2
Q ss_pred eeEEEEEeeCCCC----CCCCcEEEEEeCCcEEEEEcChh--HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHH
Q 002976 43 LSYVQILGTGMDT----QDTSPSVLLFFDNQRFIFNAGEG--LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTL 116 (861)
Q Consensus 43 ~~~l~~LGtgs~~----~~~~~slll~~~~~~yLfD~GeG--tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~ 116 (861)
.|++.+|--..+. ...+.|++|.. +|||+|.+ +.+.+.+.++++. ++|+|||.|+||++|++.+
T Consensus 12 ~~~~~~~~~~~~~~~l~~~~G~s~lie~----iLiD~G~~~~l~~~l~~~gi~~~--~~IvlTH~H~DH~ggl~~l---- 81 (267)
T 3h3e_A 12 HMRIHVLCDDSSQNGFESEHGFSVLVDS----VLFDTGKSDVFLKNARKLGIDLP--KDVLISHGHYDHAGGLLYL---- 81 (267)
T ss_dssp CEEEEEEECSCCCTTCCCCSSCEEEETT----EEECCCSSSHHHHHHHHTTCCCC--SEEECSCSCHHHHGGGGGC----
T ss_pred eeEEEEEecCCCCCCceeCcEeHHeeee----EEEECCCcHHHHHHHHHCCcCcC--CEEEECCCChhhhCCHHHh----
Confidence 4888888654332 24578898864 99999987 5566777888876 9999999999999999876
Q ss_pred hccCCCCCcEEEEcCcc
Q 002976 117 AGIGDEGLSVNVWGPSD 133 (861)
Q Consensus 117 ~~~~~~~~~l~IyGP~g 133 (861)
. ...||.++.
T Consensus 82 -----~--~~~v~~~~~ 91 (267)
T 3h3e_A 82 -----S--GKRVWLRKE 91 (267)
T ss_dssp -----C--SCEEEEEGG
T ss_pred -----c--CCEEEECHH
Confidence 1 245777653
No 133
>1vjn_A Zn-dependent hydrolase of metallo-beta-lactamase superfamily TM0207; metallo-hydrolase/oxidoreductase fold, structural genomics; 2.00A {Thermotoga maritima} SCOP: d.157.1.4
Probab=97.52 E-value=7.1e-05 Score=76.35 Aligned_cols=47 Identities=9% Similarity=-0.024 Sum_probs=33.3
Q ss_pred CcEEEEEeCCcEEEEEcChhHHHHHHHcCCCcCCCCEEEECcCCcCccCcHH
Q 002976 59 SPSVLLFFDNQRFIFNAGEGLQRFCTEHKIKLSKVDHIFLSRVCSETAGGLP 110 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGtqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLp 110 (861)
++|++|+.++.++|||||.|.. ..+....++++|||||.|+||++ ++
T Consensus 20 ~~~~li~~~~~~iLiD~g~~~~----~~~~~~~~id~VliTH~H~DH~~-~~ 66 (220)
T 1vjn_A 20 HACFALEMEGKTIVTDPFDESV----GYPIPNVTADVVTESHQHFDHNA-HH 66 (220)
T ss_dssp TTEEEEEETTEEEEESCCC---------CCCCCBCSEEECSSCC---CG-GG
T ss_pred CCEEEEEECCEEEEEcCCCCcC----CCCcCCCCcCEEEECCCCCCCCC-ch
Confidence 3499999999999999999842 12233568999999999999998 65
No 134
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=97.47 E-value=0.00023 Score=79.44 Aligned_cols=75 Identities=16% Similarity=0.322 Sum_probs=55.8
Q ss_pred cEEEEEeCCcEEEEEcChh-HHHHHHH---cCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHH
Q 002976 60 PSVLLFFDNQRFIFNAGEG-LQRFCTE---HKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLK 135 (861)
Q Consensus 60 ~slll~~~~~~yLfD~GeG-tqr~l~~---~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~ 135 (861)
+|++|..+++.+|||.|.. ....+.+ .-+.+.+|++|++||.|.||++|++.++..+. . .+.||+.+...
T Consensus 53 NsYLI~~~~~~vLIDtg~~~~~~~~l~~l~~~i~~~~IdyIi~TH~h~DH~G~l~~l~~~~~----~--~~~v~~s~~~~ 126 (410)
T 4dik_A 53 NAYLVKLNGANVLIDGWKGNYAKEFIDALSKIVDPKEITHIIVNHTEPDASGSLPATLKTIG----H--DVEIIASNFGK 126 (410)
T ss_dssp EEEEEECSSCEEEECCCCGGGHHHHHHHHTTTSCGGGCCEEECSCCCHHHHTTHHHHHHHHC----S--CCEEEECHHHH
T ss_pred EEEEEEECCeEEEEeCCCcchHHHHHHHHHHhcCcccCCEEEeCcCCcchhhhHHHHHHHcC----C--CCEEEeCHHHH
Confidence 6888888889999999864 2232222 23567789999999999999999998876432 1 36699988766
Q ss_pred HHHHH
Q 002976 136 YLVDA 140 (861)
Q Consensus 136 ~~l~~ 140 (861)
.++..
T Consensus 127 ~~l~~ 131 (410)
T 4dik_A 127 RLLEG 131 (410)
T ss_dssp HHHHH
T ss_pred HHHHh
Confidence 66654
No 135
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=97.34 E-value=0.00018 Score=85.28 Aligned_cols=81 Identities=15% Similarity=0.226 Sum_probs=53.1
Q ss_pred CccEEEEEEeCCceEEEeCCcchH--HHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCe
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEGTL--GQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPL 586 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGegt~--~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl 586 (861)
.+++++|+. +++.+|||+|.+.. .++.+.+.. .....+|++|++||.|.||++|+..+...... . ....
T Consensus 122 ~~N~ylI~~-~~g~iLIDtG~~~~~a~~~l~~i~~---~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~-~----~~~a 192 (658)
T 2cfu_A 122 LANITFIRG-DSGWIVVDTLTTPATARAAYELVSR---ELGERPIRTVIYSHAHADHFGGVRGLVEPQQV-A----SGAV 192 (658)
T ss_dssp SSCEEEEEC-SSSEEEECCCSSHHHHHHHHHHHHH---HHCCCCEEEEECSBSCHHHHTTGGGTCCHHHH-H----TTSS
T ss_pred CeEEEEEEE-CCEEEEEECCCCHHHHHHHHHHHHh---hCCCCCceEEEECCCChhhhCCHHHHHhhhhc-c----CCCC
Confidence 357888875 67799999998752 122221110 00136899999999999999999877432100 0 1346
Q ss_pred EEEeCchHHHHH
Q 002976 587 LVVGPGPLKRYL 598 (861)
Q Consensus 587 ~I~~p~~~~~~L 598 (861)
.||+++...+++
T Consensus 193 ~V~a~~~~~~~~ 204 (658)
T 2cfu_A 193 QIIAPAGFMEAA 204 (658)
T ss_dssp EEEEETTHHHHH
T ss_pred EEEEchhHHHHH
Confidence 899998876654
No 136
>3zdk_A 5' exonuclease apollo; hydrolase; HET: TLA; 2.16A {Homo sapiens}
Probab=97.32 E-value=0.00012 Score=79.35 Aligned_cols=92 Identities=13% Similarity=0.069 Sum_probs=58.7
Q ss_pred CCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccHHHHHHHHHhhcccCceeeeeecCCCCCCCCcCCCCc
Q 002976 91 SKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDLKYLVDAMKSFIPHAAMVHTHCFGPAPSSDASLPDSA 170 (861)
Q Consensus 91 ~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 170 (861)
.++++|||||.|.||++||+.++ .+.||+++.+..++......... . ...+.. + ..+
T Consensus 23 ~~i~ai~lTH~H~DHiggl~~l~-----------~~pVy~s~~t~~ll~~~l~~~~~--~--~~~~~~--~--~~~---- 79 (336)
T 3zdk_A 23 GTARLFFLSHMHSDHTVGLSSTW-----------ARPLYCSPITAHLLHRHLQVSKQ--W--IQALEV--G--ESH---- 79 (336)
T ss_dssp CSSCEEECCCCCGGGSTTCSTTC-----------CSCEEECHHHHHHHHHHHCCCTT--T--EEECCT--T--SEE----
T ss_pred CCCCEEEECCChHHHHCchHHHc-----------CCCEEecHHHHHHHHHhhhhccc--c--eEecCC--C--CeE----
Confidence 47999999999999999998752 13499999988888765432110 0 011111 0 000
Q ss_pred cCCCceeEeeCCcEEEEEEEcCCCCCCCCCCCCCCCeeEEEEEeCCc
Q 002976 171 KSANHIILVDNELAKISAILLKPSCSDGSPVKPGETSVIYVCELPEI 217 (861)
Q Consensus 171 ~~~~~~~~~~d~~i~V~~~~l~h~~~~~~~~~~~~~s~gY~~~~~~~ 217 (861)
.. +...+..++++|+.+++.|.. .+++|+|+.++.
T Consensus 80 -~i-~~~~~~~g~~~v~~~~~~H~~----------gs~~~~i~~~~~ 114 (336)
T 3zdk_A 80 -VL-PLDEIGQETMTVTLLDANHCP----------GSVMFLFEGYFG 114 (336)
T ss_dssp -EE-ESSSSSSCEEEEEEEECSSST----------TCEEEEEEETTE
T ss_pred -Ee-cCcccccCCEEEEEEECCCCc----------ceEEEEEEeCCc
Confidence 00 000123478999999999953 789999987643
No 137
>2fhx_A SPM-1; metallo-beta-lactamase, dinuclear zinc, antibiotic resistanc hydrolase, metal binding protein; 1.90A {Pseudomonas aeruginosa}
Probab=97.29 E-value=0.00012 Score=75.64 Aligned_cols=72 Identities=15% Similarity=0.077 Sum_probs=49.3
Q ss_pred CCcEEEEEeC-CcEEEEEcChhH---H---HHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEc
Q 002976 58 TSPSVLLFFD-NQRFIFNAGEGL---Q---RFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWG 130 (861)
Q Consensus 58 ~~~slll~~~-~~~yLfD~GeGt---q---r~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyG 130 (861)
..+|++|..+ +..+|||+|.+. . ..+.+. +....+ .|++||.|+||++|+..+.. . .+.||+
T Consensus 29 ~~n~~li~~~~~~~iLiD~G~~~~~~~~l~~~l~~~-~~~~~~-~vi~TH~H~DH~gg~~~l~~---~------~~~v~~ 97 (246)
T 2fhx_A 29 SSNVLVAKMLDGTVVIVSSPFENLGTQTLMDWVAKT-MKPKKV-VAINTHFHLDGTGGNEIYKK---M------GAETWS 97 (246)
T ss_dssp TEEEEEEECTTSEEEEESCCSSHHHHHHHHHHHHHH-HCCSEE-EEECCSSSHHHHTTHHHHHH---T------TCEEEE
T ss_pred CCCEEEEEeCCCeEEEEeCCCCHHHHHHHHHHHHHh-cCCCcE-EEEeCCCCccccChHHHHhh---c------CCEEEE
Confidence 4568888765 468999999642 2 223332 333445 79999999999999987652 1 256999
Q ss_pred CccHHHHHHH
Q 002976 131 PSDLKYLVDA 140 (861)
Q Consensus 131 P~gl~~~l~~ 140 (861)
++.....+..
T Consensus 98 ~~~~~~~~~~ 107 (246)
T 2fhx_A 98 SDLTKQLRLE 107 (246)
T ss_dssp EHHHHHHHHH
T ss_pred cHHHHHHHHh
Confidence 9877766543
No 138
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=95.99 E-value=0.00013 Score=86.28 Aligned_cols=77 Identities=18% Similarity=0.190 Sum_probs=50.3
Q ss_pred CccEEEEEEeCCceEEEeCCcchH--HHHHHHhCccchhhhhccccEEEEeccchhhhccHHHHHHHHHHhhcCCCCCCe
Q 002976 509 NVSSIYVNLFSKGSLLLDCGEGTL--GQLKRRYGVEGADSAVRKLRCIWISHIHADHHAGLARILALRRDLLKGVPHEPL 586 (861)
Q Consensus 509 n~Ss~ll~~~~~~~iLlDcGegt~--~qL~r~~g~~~~~~~l~~i~~IfISH~H~DH~~GL~~ll~~~~~~~~g~~~~pl 586 (861)
.++|++|.. +++.+|||||.+.. .++.+.+.. . .....|++|++||.|.||++|+..+..... .....+
T Consensus 132 ~~N~~lI~~-~~~~iLIDtG~~~~~a~~~l~~i~~-~--~~~~~I~~IilTH~H~DH~gG~~~l~~~~~-----~~~~~a 202 (668)
T 2yhe_A 132 PANMTIIEG-DSGLVLIDTLTTAETARAALDLYFQ-H--RPKKPIVAVVYSHSHIDHFGGARGIIDEAD-----VKAGKV 202 (668)
Confidence 356788865 67789999997642 233321110 0 013679999999999999999998864310 001246
Q ss_pred EEEeCchH
Q 002976 587 LVVGPGPL 594 (861)
Q Consensus 587 ~I~~p~~~ 594 (861)
.||+++..
T Consensus 203 ~I~a~~~~ 210 (668)
T 2yhe_A 203 KVFAPSGF 210 (668)
Confidence 78888875
No 139
>2cfu_A SDSA1; SDS-hydrolase, lactamase, hydrolase; HET: 1DB; 1.9A {Pseudomonas aeruginosa} SCOP: d.106.1.3 d.157.1.13 PDB: 2cfz_A* 2cg2_A 2cg3_A*
Probab=96.75 E-value=0.00045 Score=81.94 Aligned_cols=78 Identities=10% Similarity=0.137 Sum_probs=53.0
Q ss_pred CCcEEEEEeCCcEEEEEcChhHH---HHHH--HcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEGLQ---RFCT--EHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeGtq---r~l~--~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
..+|.+|..++..+|||+|.+.. ..+. +.++...+|++|++||.|.||++|+..+....... .. .+.||+++
T Consensus 122 ~~N~ylI~~~~g~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IIlTH~H~DH~GG~~~l~~~~~~~-~~--~a~V~a~~ 198 (658)
T 2cfu_A 122 LANITFIRGDSGWIVVDTLTTPATARAAYELVSRELGERPIRTVIYSHAHADHFGGVRGLVEPQQVA-SG--AVQIIAPA 198 (658)
T ss_dssp SSCEEEEECSSSEEEECCCSSHHHHHHHHHHHHHHHCCCCEEEEECSBSCHHHHTTGGGTCCHHHHH-TT--SSEEEEET
T ss_pred CeEEEEEEECCEEEEEECCCCHHHHHHHHHHHHhhCCCCCceEEEECCCChhhhCCHHHHHhhhhcc-CC--CCEEEEch
Confidence 46788888888899999998653 1121 11234567999999999999999998775210000 01 35699998
Q ss_pred cHHHHH
Q 002976 133 DLKYLV 138 (861)
Q Consensus 133 gl~~~l 138 (861)
+..+.+
T Consensus 199 ~~~~~~ 204 (658)
T 2cfu_A 199 GFMEAA 204 (658)
T ss_dssp THHHHH
T ss_pred hHHHHH
Confidence 865543
No 140
>4eyb_A Beta-lactamase NDM-1; metallo beta lactamase, antibiotic, hydrolase-antibiotic COM; HET: 0WO; 1.16A {Klebsiella pneumoniae} PDB: 4ey2_A* 4eyf_A* 4exy_A 4exs_B 4eyl_A* 3spu_A 3q6x_A* 3rkj_A 3sfp_A* 3rkk_A* 3sbl_A* 3srx_A 3zr9_A 3s0z_A 3pg4_A
Probab=96.63 E-value=0.0008 Score=70.72 Aligned_cols=70 Identities=9% Similarity=0.061 Sum_probs=47.3
Q ss_pred CcEEEEEeCCcEEEEEcChhHH--HHHHH-c-CCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccH
Q 002976 59 SPSVLLFFDNQRFIFNAGEGLQ--RFCTE-H-KIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDL 134 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeGtq--r~l~~-~-~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl 134 (861)
++|++|..++..+|||+|.+.. +.+.+ . +..-.+|++|++||.|+||++|+..|... .+.+|+.+..
T Consensus 75 ~N~ylv~~~~~~ilIDtg~~~~~~~~l~~~i~~~~~~~I~~Ii~TH~H~DH~gg~~~l~~~---------~~~v~~~~~~ 145 (270)
T 4eyb_A 75 SNGLIVRDGGRVLVVDTAWTDDQTAQILNWIKQEINLPVALAVVTHAHQDKMGGMDALHAA---------GIATYANALS 145 (270)
T ss_dssp EEEEEEEETTEEEEESCCSSHHHHHHHHHHHHHHTCCCEEEEEECSSSHHHHTTHHHHHHT---------TCEEEEEHHH
T ss_pred eEEEEEEECCEEEEEeCCCCHHHHHHHHHHHHHhcCCceEEEEeCCCChhhcCcHHHHHHC---------CCeEEECHHH
Confidence 4688998899999999985422 12221 1 11113589999999999999999876421 2558887654
Q ss_pred HHH
Q 002976 135 KYL 137 (861)
Q Consensus 135 ~~~ 137 (861)
..+
T Consensus 146 ~~~ 148 (270)
T 4eyb_A 146 NQL 148 (270)
T ss_dssp HHH
T ss_pred HHH
Confidence 433
No 141
>2p97_A Hypothetical protein; putative metal-dependent hydrolase, structural genomics, JOI for structural genomics, JCSG; HET: MSE; 1.65A {Anabaena variabilis atcc 29413} SCOP: d.157.1.12
Probab=96.53 E-value=0.002 Score=64.34 Aligned_cols=62 Identities=8% Similarity=-0.025 Sum_probs=46.2
Q ss_pred CcEEEEEeCCcEEEEEcChh---HHHHHHHcCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCccH
Q 002976 59 SPSVLLFFDNQRFIFNAGEG---LQRFCTEHKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPSDL 134 (861)
Q Consensus 59 ~~slll~~~~~~yLfD~GeG---tqr~l~~~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~gl 134 (861)
.+|++|..++..+|||+|.. ....+.+.+ ++++|++||. ||++|+..+.... +..||+++..
T Consensus 24 ~n~~li~~~~~~iliD~g~~~~~~~~~l~~~g----~i~~ii~TH~--DH~gg~~~~~~~~--------~a~v~~~~~~ 88 (201)
T 2p97_A 24 FNGFAWIRPEGNILIDPVALSNHDWKHLESLG----GVVWIVLTNS--DHVRSAKEIADQT--------YTKIAGPVAE 88 (201)
T ss_dssp EEEEEECCTTCCEEESCCCCCHHHHHHHHHTT----CCSEEECSSG--GGCTTHHHHHHHS--------CCEEEEEGGG
T ss_pred eeEEEEEeCCeeEEEECCCCcHHHHHHHHhcC----CCCEEEECCc--hhhhhHHHHHHhc--------CCEEEEcHhH
Confidence 56888888888999999943 334455544 7999999999 9999998776431 2558887654
No 142
>2yhe_A SEC-alkyl sulfatase; hydrolase, inversion, metallo-beta-lactamase fold; 2.70A {Pseudomonas SP}
Probab=95.14 E-value=0.00087 Score=79.18 Aligned_cols=74 Identities=14% Similarity=0.184 Sum_probs=50.8
Q ss_pred CCcEEEEEeCCcEEEEEcChhHH--HHHHH---cCCCcCCCCEEEECcCCcCccCcHHHHHHHHhccCCCCCcEEEEcCc
Q 002976 58 TSPSVLLFFDNQRFIFNAGEGLQ--RFCTE---HKIKLSKVDHIFLSRVCSETAGGLPGLLLTLAGIGDEGLSVNVWGPS 132 (861)
Q Consensus 58 ~~~slll~~~~~~yLfD~GeGtq--r~l~~---~~i~~~ki~~IFiTH~H~DHi~GLpgll~t~~~~~~~~~~l~IyGP~ 132 (861)
..+|.+|..++..+|||+|.+.. +.+.+ ..+...+|++|++||.|.||++|+..+.... .... ..+.||+++
T Consensus 132 ~~N~~lI~~~~~~iLIDtG~~~~~a~~~l~~i~~~~~~~~I~~IilTH~H~DH~gG~~~l~~~~-~~~~--~~a~I~a~~ 208 (668)
T 2yhe_A 132 PANMTIIEGDSGLVLIDTLTTAETARAALDLYFQHRPKKPIVAVVYSHSHIDHFGGARGIIDEA-DVKA--GKVKVFAPS 208 (668)
Confidence 45788888788899999997652 12222 1233467999999999999999999886320 0001 135689988
Q ss_pred cH
Q 002976 133 DL 134 (861)
Q Consensus 133 gl 134 (861)
+.
T Consensus 209 ~~ 210 (668)
T 2yhe_A 209 GF 210 (668)
Confidence 75
No 143
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=23.26 E-value=1.8e+02 Score=29.25 Aligned_cols=60 Identities=17% Similarity=0.189 Sum_probs=42.3
Q ss_pred EEEeCCCCCChhHHhhcCCCcEEEEeccCCCChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEeec
Q 002976 731 IVYSGDTRPCPELVEASRGATVLIHEATFEDGMMEEAIAKNHSTTKEAIDVGSSAGVYRIILTHF 795 (861)
Q Consensus 731 i~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLtHf 795 (861)
-++.||..-.+.+.++.+++|++||=+........... ....+++.+++.+++++|.+=.
T Consensus 47 ~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~~~~~-----~~~~l~~aa~~~gv~~iv~~Ss 106 (289)
T 3e48_A 47 SVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSFKRIP-----EVENLVYAAKQSGVAHIIFIGY 106 (289)
T ss_dssp EEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHHHHHH-----HHHHHHHHHHHTTCCEEEEEEE
T ss_pred EEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccchhhHH-----HHHHHHHHHHHcCCCEEEEEcc
Confidence 45678887777788889999999998876544322111 1356788888899988776543
No 144
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=23.02 E-value=1.1e+02 Score=29.95 Aligned_cols=61 Identities=11% Similarity=0.125 Sum_probs=39.8
Q ss_pred EEEeCCCCCChhHHhhcCCCcEEEEeccCCC-ChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEe
Q 002976 731 IVYSGDTRPCPELVEASRGATVLIHEATFED-GMMEEAIAKNHSTTKEAIDVGSSAGVYRIILT 793 (861)
Q Consensus 731 i~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d-~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLt 793 (861)
-++.+|.. +.+.+..+++|++||-+.... +..+......-......++.+++.+.+++|.+
T Consensus 68 ~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~ 129 (236)
T 3e8x_A 68 DIVVANLE--EDFSHAFASIDAVVFAAGSGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMV 129 (236)
T ss_dssp EEEECCTT--SCCGGGGTTCSEEEECCCCCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEE
T ss_pred eEEEcccH--HHHHHHHcCCCEEEECCCCCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEE
Confidence 34667777 667777889999999998653 22222233333334567777788888887764
No 145
>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*
Probab=22.26 E-value=1.4e+02 Score=29.94 Aligned_cols=64 Identities=13% Similarity=0.124 Sum_probs=45.1
Q ss_pred EEEEeCCCCCChhHHhhcCCCcEEEEeccCCC-ChHHHHHhcCCCCHHHHHHHHHHcCCCEEEEe
Q 002976 730 KIVYSGDTRPCPELVEASRGATVLIHEATFED-GMMEEAIAKNHSTTKEAIDVGSSAGVYRIILT 793 (861)
Q Consensus 730 ki~YsGDT~p~~~l~~~~~~aDlLIhEaTf~d-~~~~~a~~~~HsT~~eA~~va~~~~ak~lvLt 793 (861)
-.++.+|..-.+.+.++.+++|+|||-|.... +..+.............++.+++.+.+++|.+
T Consensus 45 ~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~ 109 (267)
T 3rft_A 45 EECVQCDLADANAVNAMVAGCDGIVHLGGISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFA 109 (267)
T ss_dssp EEEEECCTTCHHHHHHHHTTCSEEEECCSCCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEcCCCCHHHHHHHHcCCCEEEECCCCcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 56788999877778888889999999987542 22233334444445567777788888888765
Done!