Query 002978
Match_columns 861
No_of_seqs 260 out of 883
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 08:47:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002978.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/002978hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3kmv_A Alpha-L-arabinofuranosi 99.8 1.2E-18 4.2E-23 171.1 10.8 112 723-843 8-120 (157)
2 1wd3_A Alpha-L-arabinofuranosi 99.8 1.4E-19 4.9E-24 200.8 3.0 154 687-857 295-453 (482)
3 3kmv_A Alpha-L-arabinofuranosi 99.6 3E-15 1E-19 147.1 10.8 125 678-826 23-150 (157)
4 3akh_A Putative secreted alpha 99.2 6.3E-11 2.2E-15 136.0 10.6 135 704-849 301-437 (468)
5 1wd3_A Alpha-L-arabinofuranosi 99.0 6.7E-10 2.3E-14 124.0 10.6 148 656-824 324-481 (482)
6 3akh_A Putative secreted alpha 98.9 4.4E-09 1.5E-13 120.7 11.3 135 664-824 322-459 (468)
7 2zzr_A Unsaturated glucuronyl 98.8 1.8E-07 6E-12 105.2 20.8 232 169-435 70-341 (397)
8 2ahf_A Unsaturated glucuronyl 98.8 2.5E-07 8.6E-12 103.4 21.0 240 169-434 44-315 (377)
9 2gz6_A N-acetyl-D-glucosamine 98.8 1.6E-07 5.4E-12 104.2 18.7 298 169-478 55-377 (388)
10 3k7x_A LIN0763 protein; Q92DQ0 98.7 3.4E-07 1.2E-11 101.3 17.2 181 170-375 49-250 (349)
11 3pmm_A Putative cytoplasmic pr 98.6 3.4E-07 1.2E-11 102.5 15.6 226 169-442 70-334 (382)
12 3gt5_A N-acetylglucosamine 2-e 98.5 3.1E-06 1.1E-10 95.0 17.9 249 169-433 54-339 (402)
13 3k7x_A LIN0763 protein; Q92DQ0 98.4 1.7E-06 5.7E-11 95.8 14.6 184 231-439 45-247 (349)
14 2zbl_A Putative isomerase; N-a 98.3 1.8E-05 6.2E-10 89.3 20.0 272 168-455 52-367 (421)
15 1nc5_A Hypothetical protein YT 98.3 3.5E-06 1.2E-10 93.8 12.9 228 170-439 44-313 (373)
16 3k11_A Putative glycosyl hydro 98.2 7.1E-06 2.4E-10 93.4 13.9 298 104-442 21-366 (445)
17 2gz6_A N-acetyl-D-glucosamine 98.2 4.3E-06 1.5E-10 92.7 11.4 212 237-452 57-285 (388)
18 1fp3_A N-acyl-D-glucosamine 2- 98.1 5.5E-05 1.9E-09 84.3 16.8 271 169-454 58-364 (402)
19 3gt5_A N-acetylglucosamine 2-e 98.0 4.7E-05 1.6E-09 85.4 15.5 193 170-371 116-344 (402)
20 2ahf_A Unsaturated glucuronyl 97.8 0.00042 1.4E-08 77.3 17.2 242 167-422 87-367 (377)
21 1nc5_A Hypothetical protein YT 97.7 0.00024 8.3E-09 78.9 14.3 171 254-449 13-187 (373)
22 3pmm_A Putative cytoplasmic pr 97.7 0.00038 1.3E-08 77.8 14.8 227 184-442 23-277 (382)
23 2zzr_A Unsaturated glucuronyl 97.6 0.00049 1.7E-08 77.3 14.5 235 175-422 122-392 (397)
24 2zbl_A Putative isomerase; N-a 97.6 0.00058 2E-08 77.0 14.2 192 170-370 114-349 (421)
25 1fp3_A N-acyl-D-glucosamine 2- 97.4 0.00095 3.2E-08 74.3 13.3 187 170-371 125-348 (402)
26 3h7l_A Endoglucanase; dehydrog 96.6 0.042 1.5E-06 64.4 18.0 252 186-457 190-497 (586)
27 1nxc_A Mannosyl-oligosaccharid 96.0 0.045 1.5E-06 62.8 13.1 200 238-443 110-346 (478)
28 3k11_A Putative glycosyl hydro 95.9 0.043 1.5E-06 62.4 12.5 199 233-443 82-309 (445)
29 1dl2_A Class I alpha-1,2-manno 95.4 0.093 3.2E-06 60.6 12.9 193 238-435 104-346 (511)
30 3e6u_A LANC-like protein 1; al 95.3 0.08 2.7E-06 59.5 11.8 189 170-371 168-369 (411)
31 1x9d_A Endoplasmic reticulum m 94.6 0.15 5E-06 59.2 11.5 191 181-382 249-479 (538)
32 1ks8_A Endo-B-1,4-glucanase; c 94.6 1.2 4.2E-05 50.3 18.8 237 186-457 90-352 (433)
33 1nxc_A Mannosyl-oligosaccharid 94.3 0.065 2.2E-06 61.4 7.7 193 180-382 186-412 (478)
34 2ri9_A Mannosyl-oligosaccharid 94.0 0.26 8.9E-06 56.5 11.7 192 181-382 176-414 (475)
35 1x9d_A Endoplasmic reticulum m 93.5 0.58 2E-05 54.3 13.6 186 238-432 174-391 (538)
36 1ia6_A Cellulase CEL9M; cellul 92.8 4.7 0.00016 45.6 19.6 238 186-456 92-355 (441)
37 1hcu_A Alpha-1,2-mannosidase; 92.6 0.78 2.7E-05 52.9 12.8 187 238-433 105-336 (503)
38 2ri9_A Mannosyl-oligosaccharid 92.5 1.1 3.6E-05 51.5 13.7 187 238-433 92-323 (475)
39 1hcu_A Alpha-1,2-mannosidase; 92.3 0.44 1.5E-05 55.0 10.3 192 181-382 190-433 (503)
40 3e6u_A LANC-like protein 1; al 92.1 0.34 1.2E-05 54.4 9.0 127 175-317 239-365 (411)
41 1tf4_A T. fusca endo/EXO-cellu 91.6 4.7 0.00016 47.5 18.2 175 186-370 91-292 (605)
42 2g0d_A Nisin biosynthesis prot 91.4 3.4 0.00012 45.6 16.0 182 174-365 141-353 (409)
43 1g87_A Endocellulase 9G; endog 91.2 6.7 0.00023 46.3 19.0 174 185-370 90-290 (614)
44 1dl2_A Class I alpha-1,2-manno 91.1 1.3 4.3E-05 51.3 12.4 191 181-379 187-434 (511)
45 2xfg_A Endoglucanase 1; hydrol 90.8 15 0.00051 41.9 20.7 173 186-370 112-313 (466)
46 3gzk_A Cellulase; fold from GH 86.8 2.4 8.1E-05 49.3 10.8 127 186-316 188-333 (537)
47 3h7l_A Endoglucanase; dehydrog 83.7 4.2 0.00014 47.7 10.8 173 185-378 273-494 (586)
48 2yik_A Endoglucanase; hydrolas 77.3 11 0.00037 44.5 11.5 62 252-316 242-306 (611)
49 2v8i_A Pectate lyase; periplas 77.0 4.5 0.00015 45.8 7.5 72 239-315 379-454 (543)
50 2g0d_A Nisin biosynthesis prot 75.8 15 0.0005 40.5 11.6 130 174-315 213-353 (409)
51 1clc_A Endoglucanase CELD; EC: 75.8 6.1 0.00021 46.8 8.9 128 186-316 232-377 (639)
52 2yug_A Protein FRG1; spliceoso 72.7 36 0.0012 32.8 12.0 92 674-789 34-127 (155)
53 2v8i_A Pectate lyase; periplas 71.9 11 0.00039 42.5 9.1 87 169-268 375-461 (543)
54 1ut9_A Cellulose 1,4-beta-cell 60.4 22 0.00075 41.8 9.2 126 186-316 227-381 (609)
55 1r76_A Pectate lyase; A-helica 57.3 1.1E+02 0.0039 34.0 13.7 199 56-268 19-257 (408)
56 1ia6_A Cellulase CEL9M; cellul 52.7 45 0.0015 37.6 9.8 122 170-314 211-335 (441)
57 2w87_A Esterase D, XYL-CBM35; 46.3 65 0.0022 30.1 8.3 38 538-577 40-78 (139)
58 1ks8_A Endo-B-1,4-glucanase; c 45.8 54 0.0019 36.8 9.0 120 170-314 213-333 (433)
59 2kll_A Interleukin-33; beta-tr 45.4 2E+02 0.0069 27.1 15.2 112 660-788 20-133 (161)
60 1gxm_A Pectate lyase; mechanis 41.3 69 0.0024 34.8 8.5 91 169-268 76-181 (332)
61 2w3j_A Carbohydrate binding mo 37.2 2.1E+02 0.0071 26.8 10.4 38 538-577 40-78 (145)
62 2w47_A Lipolytic enzyme, G-D-S 30.5 1.6E+02 0.0054 27.4 8.3 38 538-577 41-79 (144)
63 3gzk_A Cellulase; fold from GH 29.4 1E+02 0.0035 35.5 8.1 75 346-432 252-332 (537)
64 1tf4_A T. fusca endo/EXO-cellu 24.8 8.7E+02 0.03 28.2 15.8 193 169-378 153-366 (605)
65 2nvh_A IL-1 beta, interleukin- 23.1 36 0.0012 33.0 2.2 28 772-801 108-135 (153)
66 2wry_A IL-1 beta, interleukin- 23.0 36 0.0012 33.3 2.2 38 759-801 109-146 (162)
67 1md6_A Interleukin 1 family, m 22.7 34 0.0012 33.2 2.0 27 773-801 107-133 (154)
68 2ila_A Interleukin-1 alpha; cy 22.4 33 0.0011 33.3 1.8 26 772-801 114-139 (155)
69 1dm9_A Hypothetical 15.5 KD pr 21.8 1E+02 0.0035 28.8 5.1 34 569-611 35-68 (133)
70 2gjh_A Designed protein; oblig 20.7 26 0.00088 27.5 0.5 20 582-602 29-48 (62)
No 1
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.76 E-value=1.2e-18 Score=171.13 Aligned_cols=112 Identities=20% Similarity=0.358 Sum_probs=97.9
Q ss_pred CceeeecCCCCCCceeeeeccccceEEeCCCCCCCCceEEEeecCCCCC-ceEEEeccCCCCeeEEeccccCCCceEEEE
Q 002978 723 GKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKD-ETISLEAVNQNGCFVYSGVNFNSGASLKLS 801 (861)
Q Consensus 723 g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~-g~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 801 (861)
++.|+||+++.||+||+|++...+ ++.++...+|++|++||||++.+ |+|||||+++||+|||+ .|..|+|+
T Consensus 8 ~~~vsl~S~n~p~~ylRh~~~~~~--~~~~~~~~~datF~vvpGLa~~~~g~VSfES~n~Pg~yLRh-----~~~~l~L~ 80 (157)
T 3kmv_A 8 ITKAKFQSYNYPNMYIRHANFDAR--IDENVTPEMDSQWELVPGLANSGDGYVSIQSVNYPGYYLRH-----SNYDLSLE 80 (157)
T ss_dssp --CBEEEESSSTTCEEEEETTEEE--EESSCSSGGGGCEEEEECSSCCSTTEEEEEESSSTTEEEEE-----ETTEEEEE
T ss_pred CccEEEEecCCCCcEEEEeCCeEE--EccCCCCccCceEEEeCCcCCCCCCEEEEEECCCCCcEEEE-----eCCEEEEe
Confidence 458999999999999999955554 45556668899999999998765 89999999999999998 38899999
Q ss_pred eccCCCccccccccceecccCccccCCceEEEecCCCceecc
Q 002978 802 CSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFLLA 843 (861)
Q Consensus 802 ~~~~~~~~~f~~~asf~~~~gl~~~~piSf~a~g~~~~~ll~ 843 (861)
+ . ++++.|+++|+|...+||++...+||++...++.||..
T Consensus 81 ~-~-~~s~~f~~dATF~~~~GLa~~~~vSfeS~n~Pg~yLrh 120 (157)
T 3kmv_A 81 K-N-DGTSLFAESATFKIVPGLADPSYISFQSYNFPTRYIRH 120 (157)
T ss_dssp E-C-CSCHHHHHTTCEEEEECSSCTTSEEEEESSSTTEEEEE
T ss_pred c-c-CCCCCccCCceEEEccCccCCCcEEEEEEcCCCeEEEE
Confidence 6 3 66778999999999999999999999999999999976
No 2
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.75 E-value=1.4e-19 Score=200.82 Aligned_cols=154 Identities=18% Similarity=0.251 Sum_probs=125.5
Q ss_pred eeecCCCCCcccccEEEEEEecCCCccccccccccCCceeeecCCC--CCCceeeeeccccceEEeCCCC---CCCCceE
Q 002978 687 MEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFD--FPGMLVVQQGTDGELVVSDSPK---EGDSSVF 761 (861)
Q Consensus 687 ~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd--~Pg~~v~~~~~~~~l~v~~~~~---~~~~s~f 761 (861)
...+|.++||.++||+||..-..+.+ ....|.-..+..|+||+.+ .|++||+|++-..+|.+..+.. ...+++|
T Consensus 295 t~~~Psd~Td~aVqAnivAa~y~~~s-~~s~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF 373 (482)
T 1wd3_A 295 TSGYPSDDTENSVQENIVAAKYVVGS-LVSGPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASW 373 (482)
T ss_dssp ESSCCCHHHHHHHHHHHHHHCEEECC-CCCSSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCE
T ss_pred eecCCChHHHHHHhhceeeeeccCCc-cccCCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeE
Confidence 34578899999999999965322333 4455666889999999888 9999999985444444322222 2468999
Q ss_pred EEeecCCCCCceEEEeccCCCCeeEEeccccCCCceEEEEeccCCCccccccccceecccCccccCCceEEEecCCCcee
Q 002978 762 RLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEYHPISFVAKGARRNFL 841 (861)
Q Consensus 762 ~~vpgl~g~~g~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asf~~~~gl~~~~piSf~a~g~~~~~l 841 (861)
++||||++ +++|||||.++||+|||+ .+.+|+|+ +. ++++.|+++|+|.+.+||++++ +||++.+
T Consensus 374 ~VVpGLAd-~g~VSFES~n~PG~YLRH-----~n~~LrL~-~~-DgS~~FrqDATF~~~~GL~~~g-vSFeS~n------ 438 (482)
T 1wd3_A 374 TVVTGLAN-SQCFSFESVDTPGSYIRH-----YNFELLLN-AN-DGTKQFHEDATFCPQAALNGEG-TSLRSWS------ 438 (482)
T ss_dssp EEEECSSC-TTSEEEEESSSTTEEEEE-----ETTEEEEE-EC-CCCHHHHHHTCEEEEECTTSSS-EEEEESS------
T ss_pred EEeccccC-CCeEEEEecCCCCceEEE-----eCCEEEEe-cC-CCCcccccCceeEeccCCCCCc-eeEEEEC------
Confidence 99999998 799999999999999998 38899999 55 6678899999999999999988 9999998
Q ss_pred ccccccccccceEEEE
Q 002978 842 LAPLLSFRDETYTVYF 857 (861)
Q Consensus 842 l~pl~~~~~~~~~~~~ 857 (861)
.|..-||++.|++|-
T Consensus 439 -~PgrYLRH~n~~Lyl 453 (482)
T 1wd3_A 439 -YPTRYFRHYENVLYA 453 (482)
T ss_dssp -STTCEEEEETTEEEE
T ss_pred -CCCcEEEEeCCEEEE
Confidence 778888999999996
No 3
>3kmv_A Alpha-L-arabinofuranosidase B; protein:carboydrate interactions, carbohydrate-binding modul trefoil fold, CBM42, sugar binding protein; 1.80A {Clostridium thermocellum}
Probab=99.59 E-value=3e-15 Score=147.14 Aligned_cols=125 Identities=14% Similarity=0.259 Sum_probs=93.2
Q ss_pred EeccCCceEeeecCCCCCcccccEEEEEEecCCCccccccccccCCceeeecCCCCCCceeeeeccccceEEeCCCCC--
Q 002978 678 LSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKE-- 755 (861)
Q Consensus 678 ~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~-- 755 (861)
+.+.+..+.+.. +....-.|+||++.+-.++ .+-.|+||+.+.||.||+|+ +..|+++....+
T Consensus 23 lRh~~~~~~~~~----~~~~~~datF~vvpGLa~~---------~~g~VSfES~n~Pg~yLRh~--~~~l~L~~~~~s~~ 87 (157)
T 3kmv_A 23 IRHANFDARIDE----NVTPEMDSQWELVPGLANS---------GDGYVSIQSVNYPGYYLRHS--NYDLSLEKNDGTSL 87 (157)
T ss_dssp EEEETTEEEEES----SCSSGGGGCEEEEECSSCC---------STTEEEEEESSSTTEEEEEE--TTEEEEEECCSCHH
T ss_pred EEEeCCeEEEcc----CCCCccCceEEEeCCcCCC---------CCCEEEEEECCCCCcEEEEe--CCEEEEeccCCCCC
Confidence 344555655544 2334778999999643332 11379999999999999999 555666554443
Q ss_pred -CCCceEEEeecCCCCCceEEEeccCCCCeeEEeccccCCCceEEEEeccCCCccccccccceecccCcccc
Q 002978 756 -GDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEY 826 (861)
Q Consensus 756 -~~~s~f~~vpgl~g~~g~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asf~~~~gl~~~ 826 (861)
..|+.|++||||++ +|.|||||.++||||||+ .|..|+|+|. +++.|+++|+|...+|.-+-
T Consensus 88 f~~dATF~~~~GLa~-~~~vSfeS~n~Pg~yLrh-----~~~~l~l~~~---~t~~fr~dATF~~~~~~~~~ 150 (157)
T 3kmv_A 88 FAESATFKIVPGLAD-PSYISFQSYNFPTRYIRH-----YNYLLRLDEI---VTELDRQDATFKIISEDTQL 150 (157)
T ss_dssp HHHTTCEEEEECSSC-TTSEEEEESSSTTEEEEE-----ETTEEEEEEC---CSHHHHHHTCEEEEC-----
T ss_pred ccCCceEEEccCccC-CCcEEEEEEcCCCeEEEE-----ECCEEEEecC---CCchhccCCeEEEecCcchh
Confidence 47899999999999 799999999999999998 3889999972 67889999999999997653
No 4
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=99.15 E-value=6.3e-11 Score=135.99 Aligned_cols=135 Identities=19% Similarity=0.264 Sum_probs=112.2
Q ss_pred EEEe-cCCCccccccccccCCceeeecCCCCCCceeeeeccccceEEeCCCCCCCCceEEEeecCCCCCceEEEeccCCC
Q 002978 704 RLIM-KEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQN 782 (861)
Q Consensus 704 r~~~-~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsle~~~~p 782 (861)
+|.. .|..+ .+..|...+.+.+++++.+.||.+|+|. +..|+++.+.....+++|++||||.+ .++|||||.++|
T Consensus 301 ~v~w~~dGwp-~~~~~~~~g~~~~s~~s~~~pg~ylrh~--~~~v~l~~~~~~~~d~tf~~~~gl~~-~~~~s~~s~~yp 376 (468)
T 3akh_A 301 KVYWNADGTP-NFGIPVADGVTPVRFSSYNYPDRYIRHW--DFRARIEANVTNLADSQFRVVTGLAG-SGTISLESANYP 376 (468)
T ss_dssp ECEECTTSCE-ECCCCCCSEECCBCEEESSSTTCEEEEE--TTEEEEESSCSSGGGGCEEEEECTTC-TTCEEEEESSST
T ss_pred EEEECCCCCE-EeccccccCccccccccccccccEEEEe--cCcEEEccCCCCcccceEEEccCCCC-CceEEEEEEeCC
Confidence 3444 24444 5777888888889999999999999998 56788877666678999999999987 599999999999
Q ss_pred CeeEEeccccCCCceEEEEeccCCCccccccccceecccCcccc-CCceEEEecCCCceecccccccc
Q 002978 783 GCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVMEKGISEY-HPISFVAKGARRNFLLAPLLSFR 849 (861)
Q Consensus 783 g~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asf~~~~gl~~~-~piSf~a~g~~~~~ll~pl~~~~ 849 (861)
|.|||+ . +..|+|+ +. .+++.|+++|+|.+.+||++- ..+||+....+..||.+==++|+
T Consensus 377 g~~lr~-~----~~~~~~~-~~-~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~~~~~l~ 437 (468)
T 3akh_A 377 GYYLRH-K----NYEVWVE-KN-DGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRHYENLLR 437 (468)
T ss_dssp TEEEEE-E----TTEEEEE-EC-CSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEEETTEEE
T ss_pred CeEEEE-E----CCEEEEe-cC-CCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEEeCCeEE
Confidence 999998 3 6689999 44 666889999999999999997 89999999999999976444443
No 5
>1wd3_A Alpha-L-arabinofuranosidase B; beta-sandwich, beta-trefoil, hydrolase; HET: NAG; 1.75A {Aspergillus kawachii} SCOP: b.29.1.21 b.42.8.1 PDB: 1wd4_A* 2d44_A* 2d43_A*
Probab=99.01 E-value=6.7e-10 Score=123.95 Aligned_cols=148 Identities=19% Similarity=0.296 Sum_probs=110.3
Q ss_pred ccCCCCCcceeeeecc-CCceEEEeccCCceEeeecCC-CCCcccccEEEEEEecCCCccccccccccCCceeeecCCCC
Q 002978 656 IPASYNGQLVTFAQES-GDSAFVLSNSNQSITMEKFPE-SGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDF 733 (861)
Q Consensus 656 ~~~~~~~~~~~~~~~~-~~~~f~~~~~~~~~~~~~~p~-~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~ 733 (861)
.|.......++|+-.+ +.+.+.|.+.++.+.+++... ......-+++|+++.+-.+ ...|+||..+.
T Consensus 324 ~pgLa~g~~VSLrs~s~n~PgrYLRH~~~~vrL~~V~s~sSa~~k~DATF~VVpGLAd-----------~g~VSFES~n~ 392 (482)
T 1wd3_A 324 GPSFTSGEVVSLRVTTPGYTTRYIAHTDTTVNTQVVDDDSSTTLKEEASWTVVTGLAN-----------SQCFSFESVDT 392 (482)
T ss_dssp SSCCCTTCEEEEEECSTTCTTEEEEEETTEEEEEECCTTSCHHHHHHTCEEEEECSSC-----------TTSEEEEESSS
T ss_pred CCccccCceEEEEECcCCCCCeEEEEcCCcEEEEecccCCCcccccceeEEEeccccC-----------CCeEEEEecCC
Confidence 4444556778886654 344456668888887777532 2334466899999963111 23689999999
Q ss_pred CCceeeeeccccceEEeCCCCC---CCCceEEEeecCCCCCceEEEeccCCCCeeEEeccccCCCceEEEEecc-----C
Q 002978 734 PGMLVVQQGTDGELVVSDSPKE---GDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCST-----E 805 (861)
Q Consensus 734 Pg~~v~~~~~~~~l~v~~~~~~---~~~s~f~~vpgl~g~~g~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~~-----~ 805 (861)
||.||||+ +.+|+++....+ ..|+.|++++||.+ +| |||||.+.||.|||+ . +..|.|. +. .
T Consensus 393 PG~YLRH~--n~~LrL~~~DgS~~FrqDATF~~~~GL~~-~g-vSFeS~n~PgrYLRH-~----n~~Lyla-~~gg~~~~ 462 (482)
T 1wd3_A 393 PGSYIRHY--NFELLLNANDGTKQFHEDATFCPQAALNG-EG-TSLRSWSYPTRYFRH-Y----ENVLYAA-SNGGVQTF 462 (482)
T ss_dssp TTEEEEEE--TTEEEEEECCCCHHHHHHTCEEEEECTTS-SS-EEEEESSSTTCEEEE-E----TTEEEEE-CSSCSSGG
T ss_pred CCceEEEe--CCEEEEecCCCCcccccCceeEeccCCCC-Cc-eeEEEECCCCcEEEE-e----CCEEEEe-cCCCcccc
Confidence 99999998 778888765432 36899999999988 46 999999999999998 3 6789995 22 1
Q ss_pred CCccccccccceecccCcc
Q 002978 806 SSEDGFNEAVSFVMEKGIS 824 (861)
Q Consensus 806 ~~~~~f~~~asf~~~~gl~ 824 (861)
++.+.|++++||+...|++
T Consensus 463 d~t~~f~~DaTF~v~~pwA 481 (482)
T 1wd3_A 463 DSKTSFNNDVSFEIETAFA 481 (482)
T ss_dssp GCSTTHHHHTCEEEEECTT
T ss_pred cCcccccCCceEEeccCCC
Confidence 3466799999999998876
No 6
>3akh_A Putative secreted alpha L-arabinofuranosidase II; five-bladed beta propeller, beta-trefoil, hydrolase; HET: AHR; 1.70A {Streptomyces avermitilis} PDB: 3akf_A* 3akg_A* 3aki_A*
Probab=98.88 E-value=4.4e-09 Score=120.67 Aligned_cols=135 Identities=19% Similarity=0.246 Sum_probs=98.2
Q ss_pred ceeeeeccCCceEEEeccCCceEeeecCCCCCcccccEEEEEEecCCCccccccccccCCceeeecCCCCCCceeeeecc
Q 002978 664 LVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGT 743 (861)
Q Consensus 664 ~~~~~~~~~~~~f~~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~ 743 (861)
+++|....-...|.. +.++.|.++.- ++ ....++||++.+-. +...++||..+.||.|+||+
T Consensus 322 ~~s~~s~~~pg~ylr-h~~~~v~l~~~---~~-~~~d~tf~~~~gl~-----------~~~~~s~~s~~ypg~~lr~~-- 383 (468)
T 3akh_A 322 PVRFSSYNYPDRYIR-HWDFRARIEAN---VT-NLADSQFRVVTGLA-----------GSGTISLESANYPGYYLRHK-- 383 (468)
T ss_dssp CBCEEESSSTTCEEE-EETTEEEEESS---CS-SGGGGCEEEEECTT-----------CTTCEEEEESSSTTEEEEEE--
T ss_pred ccccccccccccEEE-EecCcEEEccC---CC-CcccceEEEccCCC-----------CCceEEEEEEeCCCeEEEEE--
Confidence 445544332235543 56677777752 23 36799999884311 12348899999999999999
Q ss_pred ccceEEeCCCCC---CCCceEEEeecCCCCCceEEEeccCCCCeeEEeccccCCCceEEEEeccCCCccccccccceecc
Q 002978 744 DGELVVSDSPKE---GDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLSCSTESSEDGFNEAVSFVME 820 (861)
Q Consensus 744 ~~~l~v~~~~~~---~~~s~f~~vpgl~g~~g~vsle~~~~pg~~~~~~~~~~~g~~~~~~~~~~~~~~~f~~~asf~~~ 820 (861)
|..|+++....+ .+|+.|++||||++..+.|||||.+.||.|||+ . +..|+|+ +. +++.|+++|+|...
T Consensus 384 ~~~~~~~~~~~~~~~~~~atf~~~~g~~~~~~~~s~~s~~~p~~~lr~-~----~~~l~~~-~~--~~~~~~~~atf~~~ 455 (468)
T 3akh_A 384 NYEVWVEKNDGSSAFKNDASFSRRAGLADSADGIAFESYNYPGRYLRH-Y----ENLLRIQ-PV--STALDRQDATFYAE 455 (468)
T ss_dssp TTEEEEEECCSCHHHHHHTCEEEEECSSCTTTCEEEEESSSTTEEEEE-E----TTEEEEE-EC--CSHHHHHHTCEEEC
T ss_pred CCEEEEecCCCCccccCCCcEEEecCcCCCcCcEEEEeecCCceEEEE-e----CCeEEEc-cC--CCchhcccceeeec
Confidence 778888754432 368999999999884489999999999999997 3 6789999 43 35779999999998
Q ss_pred cCcc
Q 002978 821 KGIS 824 (861)
Q Consensus 821 ~gl~ 824 (861)
.++.
T Consensus 456 ~~~~ 459 (468)
T 3akh_A 456 KLAA 459 (468)
T ss_dssp C---
T ss_pred cchh
Confidence 8853
No 7
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=98.81 E-value=1.8e-07 Score=105.17 Aligned_cols=232 Identities=12% Similarity=0.036 Sum_probs=142.0
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
.|-|.-.+-++|..|+|+++++.+..+.+.|.+.-.+ . +. .+.|- .+-+++..+...|+.
T Consensus 70 ~GF~~G~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~~--~--~~-------------~~~HD---~GF~~~~s~~~~y~l 129 (397)
T 2zzr_A 70 NGFWTGCLWLAYEYNQDKKLKNIAHKNVLSFLNRINN--R--IA-------------LDHHD---LGFLYTPSCTAEYRI 129 (397)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHT--T--CS-------------CCSST---HHHHHTTTHHHHHHH
T ss_pred cchHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhhh--c--cc-------------CCCCC---chHHHHHHHHHHHHH
Confidence 5899999999999999999999999999888765431 0 00 00010 111223344578999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhcccccccccccc----------cccccccchH-HHHHHHHHHcCCHHHHHHhhhc--
Q 002978 249 ADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWN----------SLNEETGGMN-DVLYRLYTITQDPKHLLLAHLF-- 315 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~----------~l~~E~GGmn-e~L~~LY~~TGd~ryL~lA~~F-- 315 (861)
|||+++++++...|+++..|+.+.... + ++|. .+.+- || .+|++.+++|||++|++.|..-
T Consensus 130 tg~~~~~~~~~~aA~~L~~r~~~~~g~--i-qsw~~~~~~~~~~~iID~~---mni~~L~~A~~~~gd~~y~~~A~~ha~ 203 (397)
T 2zzr_A 130 NGDVKALEATIKAADKLMERYQEKGGF--I-QAWGELGYKEHYRLIIDCL---LNIQLLFFAYEQTGDEKYRQVAVNHFY 203 (397)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTTE--E-CCSSSTTCGGGCEEETTHH---HHTHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHHhCcCCCE--E-EecccCCCCCCCceeechH---hHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 999999999999999999998542111 1 2232 11222 45 6899999999999999999742
Q ss_pred -ccccc------------cchhccc---CCCCCCCcccCC------ccchhHHHHHHHhcCCcHHHHHHHHHHHHhhccc
Q 002978 316 -DKPCF------------LGLLAVQ---ADDISGFHANTH------IPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASH 373 (861)
Q Consensus 316 -~~~~~------------~~~l~~~---~D~l~g~Hanth------iP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h 373 (861)
.-... +++.... .....|.+ ... -=.+.|.+..|+.|+|++|++.|+..-+.+.++
T Consensus 204 ~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~-dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~- 281 (397)
T 2zzr_A 204 ASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYS-DESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGMTNYFLNR- 281 (397)
T ss_dssp HHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSS-TTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHT-
T ss_pred HHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccC-cchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHh-
Confidence 11111 1111000 00011111 111 113578999999999999999999988887753
Q ss_pred eeeecCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCC---ch--HHHHHHHHHhh
Q 002978 374 GYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKE---MV--YADYYERALTN 435 (861)
Q Consensus 374 ~yvTGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD---~~--YaD~~ERaLyN 435 (861)
. .-.|+. --.|..|. ++....+..+-.+++.+++++++. +++ .+ |.+..|+++-.
T Consensus 282 ~-~~d~~p-ywdt~~~~-~~~~~~D~Sa~aiaA~~Ll~L~~~----~~~~~~~~~~Y~~~A~~~l~~ 341 (397)
T 2zzr_A 282 L-PEDKVS-YWDLIFTD-GSGQPRDTSATATAVCGIHEMLKY----LPEVDPDKETYKYAMHTMLRS 341 (397)
T ss_dssp C-CTTSCC-BSBTTCCT-TSCCCBCHHHHHHHHHHHHHHHTT----SCTTCTTHHHHHHHHHHHHHH
T ss_pred h-HHhCCc-cccCCCCC-CCCCcCCCCHHHHHHHHHHHHHHh----cCccchhhHHHHHHHHHHHHH
Confidence 3 221211 11111221 222222334455666777776654 454 67 99999988843
No 8
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=98.79 E-value=2.5e-07 Score=103.35 Aligned_cols=240 Identities=12% Similarity=0.026 Sum_probs=143.0
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
.|-|.-.+-++|..|+|+++++.+..+.+.|.+.-. .. +++. ..+ .+=+++..+...|+.
T Consensus 44 ~GF~~g~lw~~ye~Tgd~~~~~~a~~~~~~l~~~~~--~~--~~~~-----------~HD-----~Gf~~~~s~~~~y~l 103 (377)
T 2ahf_A 44 DGFWSGILWLCYEYTGDEQYREGAVRTVASFRERLD--RF--ENLD-----------HHN-----IGFLYSLSAKAQWIV 103 (377)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHT--TT--TTCC-----------BST-----HHHHHHTTHHHHHHH
T ss_pred cchHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhh--cc--cCCC-----------CCC-----chHhhHHHHHHHHHH
Confidence 589999999999999999999999999888875422 00 0000 011 111233456678999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhc---cccccc---cc-c-cccccccccchHHHHHHHHHHcCCHHHHHHhhhc---cc
Q 002978 249 ADNTQALKMTKWMVEYFYNRVQNV---ITKYSV---ER-H-WNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLF---DK 317 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~~~r~~~~---~~~~~~---~~-~-~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F---~~ 317 (861)
|||+++++++...|+++..|+.+. ++.+.. .. . +..+.+-. |...|++.+++|||++|++.|..- .-
T Consensus 104 tg~~~~~~~~~~aA~~L~~r~~~~~g~i~sw~~~~~~~~~~~~iID~mm--ni~~L~~A~~~~gd~~y~~~A~~~a~~~l 181 (377)
T 2ahf_A 104 EKDESARKLALDAADVLMRRWRADAGIIQAWGPKGDPENGGRIIIDCLL--NLPLLLWAGEQTGDPEYRRVAEAHALKSR 181 (377)
T ss_dssp HCCHHHHHHHHHHHHHHHTTEETTTTEECCBSSTTCTTTTTEEEGGGGG--GHHHHHHHHHHHCCTHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHhCCCCCCeEEeccCCCCCCCCceEEechHH--HHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 999999999999999999998742 222210 00 0 11122221 236899999999999999999762 11
Q ss_pred ccc------------cchhcccC---CCCCCCcccC-----CccchhHHHHHHHhcCCcHHHHHHHHHHHHhhccceeee
Q 002978 318 PCF------------LGLLAVQA---DDISGFHANT-----HIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYAT 377 (861)
Q Consensus 318 ~~~------------~~~l~~~~---D~l~g~Hant-----hiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yvT 377 (861)
... +++..... ....|.+... +-=.+.|.+..|+.|+|++|++.|+..-+.+.++ . .-
T Consensus 182 ~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~-~-~~ 259 (377)
T 2ahf_A 182 RFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLGNADLLETAKRMARHFLAR-V-PE 259 (377)
T ss_dssp HHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHTT-C-CT
T ss_pred HhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHCChHHHHHHHHHHHHHHHh-h-HH
Confidence 111 11110000 0011111000 0113588999999999999999999988888753 2 22
Q ss_pred cCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhc-ccCCchHHHHHHHHHh
Q 002978 378 GGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFR-WTKEMVYADYYERALT 434 (861)
Q Consensus 378 GG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~-~tgD~~YaD~~ERaLy 434 (861)
.|+. --.+..| .++.......+-.+++.+++++++.+-. -.++.+|.+..|+++-
T Consensus 260 d~~p-ywd~~~~-~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~ 315 (377)
T 2ahf_A 260 DGVV-YWDFEVP-QEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVT 315 (377)
T ss_dssp TSSC-BSBTTSC-CCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred hCCc-ccccCCC-ccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHH
Confidence 1111 1111111 1222112234456667778877664210 0126789999999884
No 9
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.77 E-value=1.6e-07 Score=104.19 Aligned_cols=298 Identities=9% Similarity=-0.074 Sum_probs=162.0
Q ss_pred hhHHHHHHHHHHHh-cCChhHHHHHHHHHHHHHHH-HhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWAS-THNVTLKEKMTAVVSALSEC-QNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQY 246 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~-t~D~~L~~k~d~~Vd~L~~~-Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y 246 (861)
-|..|.++|.+|.. ++|+.+++.++..++.|.+. +.. ..|+..+.... . +.+.. -...|..=.++.|+..+|
T Consensus 55 nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~-~Gg~~~~~d~d--g--~~~~~-~~~~~~~af~i~al~~~y 128 (388)
T 2gz6_A 55 QNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDD-EGNWYFALTRG--G--EPLVQ-PYNIFSDCFAAMAFSQYA 128 (388)
T ss_dssp HHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCT-TSCBCSEECTT--S--CBCCC-CCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCC-CCCEEEEEcCC--C--CcccC-CcchHHHHHHHHHHHHHH
Confidence 57888999999998 89999999999999999988 441 23555443210 0 00000 011122223566888999
Q ss_pred HHcCChhHHHHHHHHHHHHHHHhhhccccccccc--ccccccc-c-ccchHHHHHHHHHHcCCHHHHHHhhhccc---cc
Q 002978 247 TFADNTQALKMTKWMVEYFYNRVQNVITKYSVER--HWNSLNE-E-TGGMNDVLYRLYTITQDPKHLLLAHLFDK---PC 319 (861)
Q Consensus 247 ~~tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~--~~~~l~~-E-~GGmne~L~~LY~~TGd~ryL~lA~~F~~---~~ 319 (861)
++||+++.|+.|.++++++.+++.+. .++-... .+..... + ..-+.++|.+||++|||++|++.|+...+ ..
T Consensus 129 ~~tg~~~~l~~A~~~~~~i~~~~~d~-~g~~~~~~~~~~~~~~~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~~ 207 (388)
T 2gz6_A 129 LASGEEWAKDVAMQAYNNVLRRKDNP-KGKYTKTYPGTRPMKALAVPMILANLTLEMEWLLPQETLENVLAATVQEVMGD 207 (388)
T ss_dssp HHHCCHHHHHHHHHHHHHHHTC---------------CCCCEETHHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHHT
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCC-CcccCcccCCCCCCCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999999998876421 1110000 0000000 0 00134688999999999999998876522 11
Q ss_pred ccchhcc------cCC--CCCCCcccCCccc--hh---HHHHHHHhcCCcHHHHHHHHHHHHhhccceee-ecCCCCCCC
Q 002978 320 FLGLLAV------QAD--DISGFHANTHIPV--VI---GSQMRYEVTGDPLYKVTGTFFMDIVNASHGYA-TGGTSAGEF 385 (861)
Q Consensus 320 ~~~~l~~------~~D--~l~g~HanthiP~--~~---G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yv-TGG~g~~E~ 385 (861)
|.++... ..| .+.......-.|- ++ -..+.+++|||+.|++.|+..++.+.++-.-. +||+-..-.
T Consensus 208 ~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~~~Gg~~~~~~ 287 (388)
T 2gz6_A 208 FLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDNEYGGLYYFMD 287 (388)
T ss_dssp TEETTTTEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTCSBCSCEE
T ss_pred HhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccCCCCCEEEeec
Confidence 2211100 000 0000000111121 11 13455889999999999988888775322111 244321100
Q ss_pred C-CCCcccccCCCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhccc-ccCCCCCeEEEeccCCCCCCCCc
Q 002978 386 W-SDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSI-QRGTEPGVMIYMLPLGRGDSKAK 463 (861)
Q Consensus 386 f-~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~-q~~~d~g~~~Y~~PL~~g~~k~~ 463 (861)
+ +.| ...+.....-.+...+.+.-.-.+++.|||.+|.+.++++. +-+... .++..++.|.+.++-+.... ..
T Consensus 288 ~~g~~---~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~-~~~~~~~~D~~~G~w~~~l~~~g~~~~-~~ 362 (388)
T 2gz6_A 288 AAGHP---PQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMH-DYSWQHFADPEYGEWFGYLNRRGEVLL-NL 362 (388)
T ss_dssp TTSCC---CSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHHBCTTTSSBCCEECTTSCBSS-CB
T ss_pred CCCCc---cccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCcCCCCCceEEeeCCCcCCCC-cC
Confidence 1 111 00001133344566777888888999999999999998864 333322 23334455566654432111 11
Q ss_pred ccCCCCCccCccccc
Q 002978 464 SYHGWGTRFSSFWCC 478 (861)
Q Consensus 464 ~~~~~g~~~~~F~CC 478 (861)
....|..+++.+.||
T Consensus 363 ~~~~~K~~YH~~~~~ 377 (388)
T 2gz6_A 363 KGGKWKGCFHVPRAM 377 (388)
T ss_dssp SCCSSCSSSHHHHHH
T ss_pred CCCCCCCCcchHHHH
Confidence 112344566665554
No 10
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.67 E-value=3.4e-07 Score=101.33 Aligned_cols=181 Identities=13% Similarity=0.083 Sum_probs=117.4
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCcc-ccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 170 GHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYL-SAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL-~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
++.+.++..+|..|+|+++++.+.+.++.+... .+|++ +.+ .+.. .| +..++++.|+.
T Consensus 49 a~~~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~----~~~~~~~~~----~DD~-----a~--------~~la~~~aye~ 107 (349)
T 3k7x_A 49 AHLVEVRLDAYLRTKKQADLEVAEKTYLHNKNR----NGGTLIHDF----YDDM-----LW--------NALAAYRLYKA 107 (349)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH----TTSSSCCSB----HHHH-----HH--------HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhc----CCCCCCccC----ccHH-----HH--------HHHHHHHHHHH
Confidence 566799999999999999999999988877652 23333 222 2221 11 23467899999
Q ss_pred cCChhHHHHHHHHHHHH-HHHhhhccccccccccccccc------ccccchHHHHHHHHHHcCCHHHHHHhhhcc---cc
Q 002978 249 ADNTQALKMTKWMVEYF-YNRVQNVITKYSVERHWNSLN------EETGGMNDVLYRLYTITQDPKHLLLAHLFD---KP 318 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~-~~r~~~~~~~~~~~~~~~~l~------~E~GGmne~L~~LY~~TGd~ryL~lA~~F~---~~ 318 (861)
||+++.|++|.++.+++ ..++.+...+ .-.|..-. ..-|.+...+++||++|||++||+.|++.. ..
T Consensus 108 t~~~~yL~~A~~l~~~l~~~~wd~~~gG---Gi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~ 184 (349)
T 3k7x_A 108 TGKSIYLEDAQLVWQDLVDTGWNDIMGG---GFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTK 184 (349)
T ss_dssp HCCHHHHHHHHHHHHHHHHHTBCSGGGS---CBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HCCchHHHHHHHHHHHHHHhCCCCCCCC---ceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 99999999999999999 6666432111 11222110 011235579999999999999999998642 11
Q ss_pred cccchhcccCCCCC----------CCcccCCccchhHHHHHHHhcCCcHHHHHHHHHHHHhhcccee
Q 002978 319 CFLGLLAVQADDIS----------GFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGY 375 (861)
Q Consensus 319 ~~~~~l~~~~D~l~----------g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~y 375 (861)
.++++...=.|.+. ..++..+.-++.|.+.+|++|||+.|++.+++..+.+.+ +..
T Consensus 185 ~l~d~~g~v~Dg~~~~~~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~-~f~ 250 (349)
T 3k7x_A 185 VLVREDGFVEDGINRLEDGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTAAISLK-ELT 250 (349)
T ss_dssp HHBCTTSCBCCEECTTSSSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHE
T ss_pred cCCCCCCeEecCCccCCCCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-Hhc
Confidence 22222100001110 012222233467899999999999999999999998874 443
No 11
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=98.62 E-value=3.4e-07 Score=102.53 Aligned_cols=226 Identities=12% Similarity=0.119 Sum_probs=137.9
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
.|.|+.++.++|..|+|+++++.+..+++.+.. + +|-+. +.... . ++..|+..|+.
T Consensus 70 ~G~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~--~---~~~~~-----------n~D~~----~----~~~~l~~lY~~ 125 (382)
T 3pmm_A 70 HGVGLYGIYQYYQQTGDIEMRDIIDRWFADRFA--E---GATTK-----------NVNTM----A----PFLTLAYRFEE 125 (382)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH--H---CCCCC-----------CTTTT----T----THHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHc--C---CCCcC-----------cccch----H----HHHHHHHHHHH
Confidence 399999999999999999999999999987643 2 22111 11111 1 12356799999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhccc-ccc--------cccccccccccccchH-HHHHHHHHHcCCHHHHHHhhh-cc-
Q 002978 249 ADNTQALKMTKWMVEYFYNRVQNVIT-KYS--------VERHWNSLNEETGGMN-DVLYRLYTITQDPKHLLLAHL-FD- 316 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~~~r~~~~~~-~~~--------~~~~~~~l~~E~GGmn-e~L~~LY~~TGd~ryL~lA~~-F~- 316 (861)
||+++.++++..+++++.+++.+... ++. ..+.| +..- -|+ ..|+++|++|||++|++.|.+ |.
T Consensus 126 Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~~~~~~~~~~W--iDgl--~M~~p~La~~~~~tgd~~y~d~A~~q~~~ 201 (382)
T 3pmm_A 126 TGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMTLAEENHQQMW--DDTL--MMTVLPLAKIGKLLNRPQYVEEATYQFLL 201 (382)
T ss_dssp HCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCCSSCCCTTEEE--TTHH--HHTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeecCCCCCCCcEE--ecch--hhhHHHHHHHHHHHCCHHHHHHHHHHHHH
Confidence 99999999999999999865432111 110 00111 1111 144 578999999999999998843 21
Q ss_pred -cccccchhcccCCCCCCCcccCCc------c---------chhHHHHHHHh-------cCCcHHHHHHHHHHHHhhccc
Q 002978 317 -KPCFLGLLAVQADDISGFHANTHI------P---------VVIGSQMRYEV-------TGDPLYKVTGTFFMDIVNASH 373 (861)
Q Consensus 317 -~~~~~~~l~~~~D~l~g~Hanthi------P---------~~~G~a~~Y~~-------TGD~~y~~aa~~fwd~V~~~h 373 (861)
...++++. +.+ -.|..++. + .+.|.++.|+. ++++.|++..+..-+.+.++.
T Consensus 202 ~~~~l~D~~----tGl-~~h~~~~~~~~~~~~~~WaRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a~~~~~~q 276 (382)
T 3pmm_A 202 HVQNLMDRE----TGL-WFHGWNYEGRHNFARARWARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQIAALAECQ 276 (382)
T ss_dssp HHHHHBCTT----TSC-BCSEEETTTTBCTTCCCBHHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHHHccCCC----CCC-eeeeccCCCCCCCCcceecccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHHHHHHHcC
Confidence 11222221 111 11221111 2 14678888987 556678888877777776554
Q ss_pred eeeecCCCCCCCCCCCcccccCCCcCccc----chhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhccccc
Q 002978 374 GYATGGTSAGEFWSDPKRLASTLGTENEE----SCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQR 442 (861)
Q Consensus 374 ~yvTGG~g~~E~f~~p~~l~~~l~~~~~E----TCas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q~ 442 (861)
- .+| .|.. +.+ .+..+-| .+.+|+|++..+.=+. +.+|.+..||++ ++++..++
T Consensus 277 ~-~~G------~W~~---~~d-~~~~y~EsSatA~~ay~ll~~~~~g~l---~~~Y~~~a~ka~-~~l~~~i~ 334 (382)
T 3pmm_A 277 D-DSG------LWHT---LLD-DPHSYLEASATAGFAYGILKAVRKRYV---GQHYAGVAEKAI-RGIVQNIS 334 (382)
T ss_dssp C-TTS------CEES---BTT-CTTSCEEHHHHHHHHHHHHHHHHTTSS---CGGGHHHHHHHH-HHHHHTBC
T ss_pred C-CCC------Chhh---ccC-CCCCCccccHHHHHHHHHHHHHHcCCC---cHHHHHHHHHHH-HHHHhhCC
Confidence 2 233 2321 111 0223444 4446888887773221 468999999965 88887765
No 12
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.46 E-value=3.1e-06 Score=95.03 Aligned_cols=249 Identities=12% Similarity=0.121 Sum_probs=149.5
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcC--CCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMG--SGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQY 246 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~--dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y 246 (861)
-|..|.++|.+|..++++++++.++..++.|.+.-. .+ .||....... +.. +.=...|..--++.|+++ |
T Consensus 54 n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~-d~~~Gg~~~~~~dG-----~~~-~~~~~lyd~Af~i~al~~-~ 125 (402)
T 3gt5_A 54 STRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHR-NPATGGYAWTLCDD-----RVE-DDTNHCYGLAFVMLAYSC-G 125 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTB-CTTTSCBCSEEETT-----EEE-ECCEEHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCc-cCCCCcEEEEeeCC-----CCC-cCCcchHHHHHHHHHHHH-H
Confidence 589999999999999999999999999999876422 12 3555443110 000 000123333345667777 7
Q ss_pred HHcCChhHHHHHHHHHHHHHHHhhhcccc-cc--ccccccccccccc-----chHHHHHHHHHHcCCHHHHHHhhhccc-
Q 002978 247 TFADNTQALKMTKWMVEYFYNRVQNVITK-YS--VERHWNSLNEETG-----GMNDVLYRLYTITQDPKHLLLAHLFDK- 317 (861)
Q Consensus 247 ~~tG~~~aL~va~~~ad~~~~r~~~~~~~-~~--~~~~~~~l~~E~G-----Gmne~L~~LY~~TGd~ryL~lA~~F~~- 317 (861)
..||++++|+.|.++.+.+.+++.+...+ +. ...-|. +..-.+ =+.+++.+||++|||++|++.|+...+
T Consensus 126 ~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~~~~~n~~m~l~eall~L~~~tgd~~~~~~a~~l~~~ 204 (402)
T 3gt5_A 126 LKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTRYRGQNANMHMCEAMLAAYEASGEQRYLERALVLADR 204 (402)
T ss_dssp HHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC-BCSCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC-CCCCCCCCHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 77999999999999999999887431111 10 001111 111011 024689999999999999999876422
Q ss_pred --ccccchhc----ccC-CCCC-CCcccCC----c--c--chhHH--------HHHHHhcCCcHHHHHHHHHHHHhhccc
Q 002978 318 --PCFLGLLA----VQA-DDIS-GFHANTH----I--P--VVIGS--------QMRYEVTGDPLYKVTGTFFMDIVNASH 373 (861)
Q Consensus 318 --~~~~~~l~----~~~-D~l~-g~Hanth----i--P--~~~G~--------a~~Y~~TGD~~y~~aa~~fwd~V~~~h 373 (861)
..|.++.. ..- .... ....|.. + | +--|| ...+++++|+.|++.|...++.+.+ +
T Consensus 205 ~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~~~~-~ 283 (402)
T 3gt5_A 205 ITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDVAVA-R 283 (402)
T ss_dssp HHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHHHHH-H
T ss_pred HHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHH-h
Confidence 11222110 000 0000 0000111 1 1 22354 4457889999999999998888753 3
Q ss_pred eee--ecCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHHH
Q 002978 374 GYA--TGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERAL 433 (861)
Q Consensus 374 ~yv--TGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERaL 433 (861)
.+- .||+-. +. +++ +.........+...+.|.-+-.|++.|||.+|.+.++++.
T Consensus 284 gwd~~~Gg~~~-~~--d~~---g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~ 339 (402)
T 3gt5_A 284 SWDAVRGGLCY-GF--APD---GTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLW 339 (402)
T ss_dssp HBCTTTCSBCS-EE--CTT---SCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred cccCCCCcEEE-EE--cCC---CCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 322 354421 11 111 1111345566777788888888999999999999998875
No 13
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=98.43 E-value=1.7e-06 Score=95.76 Aligned_cols=184 Identities=21% Similarity=0.167 Sum_probs=114.2
Q ss_pred ccchhHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhh-cccccccccccccccccccchHHHHHHHHHHcCCHHHH
Q 002978 231 PYYTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQN-VITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHL 309 (861)
Q Consensus 231 pyYt~HkI~aGLld~y~~tG~~~aL~va~~~ad~~~~r~~~-~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL 309 (861)
-+++.|. +.+|+++|++||+++.++++.+..+++..+-.. .+..+.++. .+ +-.++.++|++|||++||
T Consensus 45 yWW~a~~-~~~l~d~~~~tgd~~y~~~a~~~~~~~~~~~~~~~~~~~~DD~-------a~--~~la~~~aye~t~~~~yL 114 (349)
T 3k7x_A 45 YWWLAHL-VEVRLDAYLRTKKQADLEVAEKTYLHNKNRNGGTLIHDFYDDM-------LW--NALAAYRLYKATGKSIYL 114 (349)
T ss_dssp HHHHHHH-HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTTSSSCCSBHHHH-------HH--HHHHHHHHHHHHCCHHHH
T ss_pred ccHHHHH-HHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCccCccHH-------HH--HHHHHHHHHHHHCCchHH
Confidence 3447777 488999999999999999999999988764221 111111111 11 346899999999999999
Q ss_pred HHhhhccc----ccccchhcccCCCCCCCccc----------CCccchhHHHHHHHhcCCcHHHHHHHHHHHHhhcccee
Q 002978 310 LLAHLFDK----PCFLGLLAVQADDISGFHAN----------THIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGY 375 (861)
Q Consensus 310 ~lA~~F~~----~~~~~~l~~~~D~l~g~Han----------thiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~y 375 (861)
++|+...+ ..+.++.. .+++-+ +..+.+...+++|++|||+.|++.|+..|+.+.+ +++
T Consensus 115 ~~A~~l~~~l~~~~wd~~~g------GGi~W~~~~~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~-~l~ 187 (349)
T 3k7x_A 115 EDAQLVWQDLVDTGWNDIMG------GGFAWRRPQMYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTK-VLV 187 (349)
T ss_dssp HHHHHHHHHHHHHTBCSGGG------SCBEEETTEEEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HHB
T ss_pred HHHHHHHHHHHHhCCCCCCC------CceEecCCCccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHh-cCC
Confidence 99975421 11211111 111111 1223456688999999999999999999999875 433
Q ss_pred e-ecCCCCCCCCCCCcccccCCCcCcccchhhHH---HHHHHHhhhcccCCchHHHHHHHHHhhhhcc
Q 002978 376 A-TGGTSAGEFWSDPKRLASTLGTENEESCTTYN---MLKVSRHLFRWTKEMVYADYYERALTNGVLS 439 (861)
Q Consensus 376 v-TGG~g~~E~f~~p~~l~~~l~~~~~ETCas~n---mlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa 439 (861)
- .|.+-.++. . .. ......+..=+|| +|.-+-.|++.|+|.+|.+..++.+ |.++.
T Consensus 188 d~~g~v~Dg~~--~----~~-~g~~~~~~~~tYnqg~~l~g~~~LY~~T~d~~yl~~a~~l~-~~~~~ 247 (349)
T 3k7x_A 188 REDGFVEDGIN--R----LE-DGTIDYEWKFTYNQGVYIGANLELYRITKEAIYLDTANKTA-AISLK 247 (349)
T ss_dssp CTTSCBCCEEC--T----TS-SSCBCTTCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHH
T ss_pred CCCCeEecCCc--c----CC-CCccCCcCeeeHHHHHHHHHHHHHHHhhCcHHHHHHHHHHH-HHHHH
Confidence 2 122111100 0 00 0000111233333 5566678999999999999998876 44444
No 14
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=98.32 E-value=1.8e-05 Score=89.31 Aligned_cols=272 Identities=11% Similarity=0.037 Sum_probs=155.8
Q ss_pred chhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhh-cCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHH
Q 002978 168 FVGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNK-MGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQY 246 (861)
Q Consensus 168 ~~Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~-~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y 246 (861)
.-|..|.+.|.++. +++++..+.++..++.|.+.-.. .+.|+..... ..++.... ...|..=-++.++++ |
T Consensus 52 ~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~~s~d----~dg~~~~~--k~lyd~Af~i~al~~-~ 123 (421)
T 2zbl_A 52 ITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWYACVN----DQGVVDAS--KQGYQHFFALLGAAS-A 123 (421)
T ss_dssp HHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBCSEEE----TTEEEECC--EEHHHHHHHHHHHHH-H
T ss_pred HHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEEEEeC----CCCCcCCc--hhHHHHHHHHHHHHH-H
Confidence 35888899999987 99999999999999998776321 1246653321 11111110 233444446667877 9
Q ss_pred HHcCChhHHHHHHHHHHHHHHHhhhcccc-c--cccccccccc--ccccc---hHHHHHHHHHHcCCHHHHHHhhhccc-
Q 002978 247 TFADNTQALKMTKWMVEYFYNRVQNVITK-Y--SVERHWNSLN--EETGG---MNDVLYRLYTITQDPKHLLLAHLFDK- 317 (861)
Q Consensus 247 ~~tG~~~aL~va~~~ad~~~~r~~~~~~~-~--~~~~~~~~l~--~E~GG---mne~L~~LY~~TGd~ryL~lA~~F~~- 317 (861)
++||++++++++....+++.+.+.....+ + ...+-+.... ....+ |.++|.+||++|||++|++.|+...+
T Consensus 124 ~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~~~~~~~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~ 203 (421)
T 2zbl_A 124 VTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQTEDYRGGNANMHAVEAFLIVYDVTHDKKWLDRALRIASV 203 (421)
T ss_dssp HTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCSBCSCEEHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHH
T ss_pred HHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCcccccCCCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 99999999999999999999877431111 1 0001111100 01111 35899999999999999987765421
Q ss_pred --ccccch----hc----ccCCCCCCC----cccCCc-----cc-----hhHHHHHHHhc---CC--c-HHHHHHHHHHH
Q 002978 318 --PCFLGL----LA----VQADDISGF----HANTHI-----PV-----VIGSQMRYEVT---GD--P-LYKVTGTFFMD 367 (861)
Q Consensus 318 --~~~~~~----l~----~~~D~l~g~----Hanthi-----P~-----~~G~a~~Y~~T---GD--~-~y~~aa~~fwd 367 (861)
..+..+ +. .+...+.+. -.+... |- +-+.+..|+++ || + .|++.|...++
T Consensus 204 ~~~~~~~~~~~~l~~~f~~~~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~~~~~~~~~l~~A~~l~~ 283 (421)
T 2zbl_A 204 IIHDVARNGDYRVNEHFDSQWNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEARFETPPAWLLEDAKGLFH 283 (421)
T ss_dssp HCCCCCGGGTTCCCCEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHTTCCCCTHHHHHHHHHHH
T ss_pred HHHHhccCCCCchhhhcCCccccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccccccchHHHHHHHHHHHH
Confidence 111110 00 000001000 001111 11 11345668888 67 6 89999999999
Q ss_pred Hhhccceee-e--cCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhcccc-cC
Q 002978 368 IVNASHGYA-T--GGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQ-RG 443 (861)
Q Consensus 368 ~V~~~h~yv-T--GG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q-~~ 443 (861)
.+.+ +.+- . ||.=-. ..+ .+.+.....+.+...+++.-.-.|++.|||.+|.+.+++++ +.+.... ++
T Consensus 284 ~~~~-~g~d~~~~GG~~~~---~~~---~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~~-~~~~~~~~d~ 355 (421)
T 2zbl_A 284 ATIR-DAWAPDGADGFVYS---VDW---DGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKWW-DYCIKYLMDY 355 (421)
T ss_dssp HHHH-HHBSCSSSSSBCSC---BCT---TSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCT
T ss_pred HHHH-HhcCCCCCCcEEEe---ecC---CCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCCCC
Confidence 8864 4442 2 443211 111 11112344555666777777788999999999999999864 4444322 22
Q ss_pred CCCCeEEEeccC
Q 002978 444 TEPGVMIYMLPL 455 (861)
Q Consensus 444 ~d~g~~~Y~~PL 455 (861)
..++.+.+.++-
T Consensus 356 ~~G~w~~~l~~~ 367 (421)
T 2zbl_A 356 ENGSWWQELDAD 367 (421)
T ss_dssp TTSSBCSEECTT
T ss_pred CCCeeEeeECcC
Confidence 233444455443
No 15
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=98.29 E-value=3.5e-06 Score=93.81 Aligned_cols=228 Identities=15% Similarity=0.151 Sum_probs=141.8
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHHc
Q 002978 170 GHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFA 249 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~t 249 (861)
|-++.|++.+|..|+|+++++.+...++.+. + .+|.+. +.... +. .|. +..++++.|+.|
T Consensus 44 G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~---~--~~g~l~-~~~~~------lD-----d~~---~g~~ll~lY~~T 103 (373)
T 1nc5_A 44 GVFLCGVLRLWEATGEKRYFEYAKAYADLLI---D--DNGNLL-FRRDE------LD-----AIQ---AGLILFPLYEQT 103 (373)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHB---C--TTCCBC-CCTTC------GG-----GTG---GGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHh---C--CCCccc-CCCCC------cc-----hHH---HHHHHHHHHHHh
Confidence 8999999999999999999999999998864 2 466655 42211 11 111 234678999999
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcccccccccccc-ccccc---ccc--h-HHHHHHHHHHcCCHHHHHHhhhcc---ccc
Q 002978 250 DNTQALKMTKWMVEYFYNRVQNVITKYSVERHWN-SLNEE---TGG--M-NDVLYRLYTITQDPKHLLLAHLFD---KPC 319 (861)
Q Consensus 250 G~~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~-~l~~E---~GG--m-ne~L~~LY~~TGd~ryL~lA~~F~---~~~ 319 (861)
|+++.++++..+++++.+++... ....|. ....+ .=| | ...|+++|++|||++|++.|.+-. ...
T Consensus 104 gd~~yl~~a~~la~~l~~~~r~~-----~G~fw~~~~~~~~~w~D~l~m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~ 178 (373)
T 1nc5_A 104 KDERYVKAAKRLRSLYGTLNRTS-----EGGFWHKDGYPYQMWLDGLYMGGPFALKYANLKQETELFDQVVLQESLMRKH 178 (373)
T ss_dssp CCHHHHHHHHHHHGGGGTSCBCT-----TSCBCSCTTSTTEEETHHHHHHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHhccCCC-----CCCeeccCCCCCeEEeCcHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999996544211 111121 00000 001 3 367899999999999999986521 111
Q ss_pred ccchhcccCCCCCCCcccC------------C-cc---------chhHHHHHHHh-----cCCcHHHHHHHHHHHHhhcc
Q 002978 320 FLGLLAVQADDISGFHANT------------H-IP---------VVIGSQMRYEV-----TGDPLYKVTGTFFMDIVNAS 372 (861)
Q Consensus 320 ~~~~l~~~~D~l~g~Hant------------h-iP---------~~~G~a~~Y~~-----TGD~~y~~aa~~fwd~V~~~ 372 (861)
+.++. +.+ -.|..+ . -| .+.|.++.|+. ++++.|++.+++.-+.+.++
T Consensus 179 l~D~~----tGl-~~h~~~~~~~~~w~d~~tg~~~~~WaRg~gW~~~gl~~~l~~lp~~~~~~~~~~~~~~~~a~~l~~~ 253 (373)
T 1nc5_A 179 TKDAK----TGL-FYHAWDEAKKMPWANEETGCSPEFWARSIGWYVMSLADMIEELPKKHPNRHVWKNTLQDMIKSICRY 253 (373)
T ss_dssp HBCTT----TSC-BCSEEETTCCSTTSCTTTCBCSCCBHHHHHHHHHHHHHHGGGSCTTCHHHHHHHHHHHHHHHHHHTT
T ss_pred hcCCC----CCC-EEeecCCccccccccccCCCCCCcccchHhHHHHHHHHHHHhCCccchhHHHHHHHHHHHHHHHHHh
Confidence 22221 111 012111 1 12 24667888887 68889999999998888865
Q ss_pred ceee-ecCCCCCCCCCCCcccccCCCcCccc----chhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhcc
Q 002978 373 HGYA-TGGTSAGEFWSDPKRLASTLGTENEE----SCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLS 439 (861)
Q Consensus 373 h~yv-TGG~g~~E~f~~p~~l~~~l~~~~~E----TCas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa 439 (861)
+. . +|..-. -+..| .. +..+-| .+.+|.|++..+.-+. |.+|.+..||++ +++..
T Consensus 254 q~-~~dG~W~~--~ld~~-~~----~~~~~EsSatA~~ay~l~~g~~~g~l---~~~Y~~~a~k~~-~~l~~ 313 (373)
T 1nc5_A 254 QD-KETGLWYQ--IVDKG-DR----SDNWLESSGSCLYMYAIAKGINKGYL---DRAYETTLLKAY-QGLIQ 313 (373)
T ss_dssp SC-TTTSCCBS--BTTCT-TS----TTCCBCHHHHHHHHHHHHHHHHHTSS---CGGGHHHHHHHH-HHHHH
T ss_pred cC-CCCCceee--ecCCC-CC----CCCCccccHHHHHHHHHHHHHHCCCC---cHHHHHHHHHHH-HHHHH
Confidence 42 2 331110 01111 11 233445 5566888887765332 468999999998 77766
No 16
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.23 E-value=7.1e-06 Score=93.36 Aligned_cols=298 Identities=13% Similarity=0.095 Sum_probs=169.6
Q ss_pred cccCCCeEeCCCCchHHHHHHHHhhhhccCcchhhHhHHHhcCCCCCCCCCCCCcC------CCcCccccchhHHHHHHH
Q 002978 104 EVSLHDVKLDPSSLHWRAQQTNLEYLLMLDVDSLVWSFQKTAGSPTAGKAYEGWED------PTCELRGHFVGHYLSASA 177 (861)
Q Consensus 104 ~~pl~~V~L~~~~~~~~~~~~~~~~ll~~d~drlL~nFR~~AGl~~~g~~ygGWE~------~d~~l~Gh~~Gh~LsAlA 177 (861)
++|.+.++- .-.....++..+||...-+.+++.. ..|-.. ..|..|.. .+..+.--..|..++|++
T Consensus 21 ~~~~~~~~~---~~i~~~~d~~~~~~~~~~~~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~y~~Gv~l~gl~ 92 (445)
T 3k11_A 21 QGTYGDLTP---EQVKKDIDRVFAYIDKETPARVVDK---NTGKVI--TDYTAMGDEAQLERGAFRLASYEWGVTYSALI 92 (445)
T ss_dssp SSCCSCCCH---HHHHHHHHHHHHHHHHTSCCCEEET---TTCCEE--CCTTTCCTTEEECCCSSCTTSHHHHHHHHHHH
T ss_pred CCCCCcCCH---HHHHHHHHHHHHHHhccCcceeecC---CCCcee--ccccccccccccccCCcccCccCHHHHHHHHH
Confidence 467776663 2455677888888887666665532 111100 01111211 000000012499999999
Q ss_pred HHHHhcCChhHHHHHHHHHHHHHHHHh-----hcCCCccccCCcchhhhhh--ccCCcccccchhHHHHHHHHHHHHHcC
Q 002978 178 HMWASTHNVTLKEKMTAVVSALSECQN-----KMGSGYLSAFPSEQFDRFE--ALKPVWAPYYTIHKILAGLLDQYTFAD 250 (861)
Q Consensus 178 ~~~a~t~D~~L~~k~d~~Vd~L~~~Q~-----~~~dGYL~a~~~~~~~~~~--~l~~~W~pyYt~HkI~aGLld~y~~tG 250 (861)
.+|..|+|+++.+.++..++.|.+.-. ...+|.+..- +.+... .+.+ | +. +..+|+..|+.|+
T Consensus 93 ~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~---~r~~~~~~~LDD-----~-g~-~~~~Li~lY~~T~ 162 (445)
T 3k11_A 93 AAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQ---LLQILTPHALDD-----A-GA-VCTAMIKLRLKDE 162 (445)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHH---HHHHHSCCSGGG-----T-HH-HHHHHHHHHHHCT
T ss_pred HHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecc---cccccCCCcchh-----H-HH-HHHHHHHHHHhcC
Confidence 999999999999999999998775311 0134554320 000000 0111 1 22 5567889999999
Q ss_pred ChhHHHHHHHHHHHHHHHhhhcccc-c---cc--ccccccccccccchH-HHHHHHHHHcCCHH--HHHHhhh-cc--cc
Q 002978 251 NTQALKMTKWMVEYFYNRVQNVITK-Y---SV--ERHWNSLNEETGGMN-DVLYRLYTITQDPK--HLLLAHL-FD--KP 318 (861)
Q Consensus 251 ~~~aL~va~~~ad~~~~r~~~~~~~-~---~~--~~~~~~l~~E~GGmn-e~L~~LY~~TGd~r--yL~lA~~-F~--~~ 318 (861)
+++.++++...+||+.+++.+...+ + .. .++| +.+-+ |+ ..|++++++|||++ |++.|.. |. ..
T Consensus 163 d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~~~~~~q~W--iD~ly--M~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~ 238 (445)
T 3k11_A 163 SLPVDGLIQNYFDFIINKEYRLADGTFARNRPQRNTLW--LDDMF--MGIPAVAQMSRYDKEAKNKYLAEAVKQFLQFAD 238 (445)
T ss_dssp TCCCHHHHHHHHHHHHHTSCBCTTCCBCBCSSSTTEEE--THHHH--HHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHcCCCCCCCceeecCCCCCceE--ecchh--hHHHHHHHHHHHHCCcchHHHHHHHHHHHHHHH
Confidence 9999999999999999887431111 0 00 1112 11111 55 57889999999999 9998864 21 11
Q ss_pred cccchhcccCCCCCCCcccC-----Ccc---------chhHHHHHHHh-----cCCcHHHHHHHHHHHHhhccceeeecC
Q 002978 319 CFLGLLAVQADDISGFHANT-----HIP---------VVIGSQMRYEV-----TGDPLYKVTGTFFMDIVNASHGYATGG 379 (861)
Q Consensus 319 ~~~~~l~~~~D~l~g~Hant-----hiP---------~~~G~a~~Y~~-----TGD~~y~~aa~~fwd~V~~~h~yvTGG 379 (861)
.++++.. .| ..|..+ +-+ .+.|.++.++. ++.+.+++..+..-+-+.+++- .+|
T Consensus 239 ~l~D~~t----GL-~~Hg~~~~~~~~~~~~WaRGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a~~l~~~Q~-~~G- 311 (445)
T 3k11_A 239 RMFIPEK----GL-YRHGWVESSTDHPAFCWARANGWALLTACELLDVLPEDYPQRPKVMDYFRAHVRGVTALQS-GEG- 311 (445)
T ss_dssp HHEETTT----TE-ECSEEETTCSSCCCCCBHHHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHHHHHHTTCC-TTS-
T ss_pred hcccCCC----CC-EeeeecCCCCCCCcceecccchHHHHHHHHHHHhcccccccHHHHHHHHHHHHHHHHHhCC-CCC-
Confidence 2222211 01 112111 112 24678888886 5667788888888887776552 222
Q ss_pred CCCCCCCCCCcccccCCCcCcccc----hhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhccccc
Q 002978 380 TSAGEFWSDPKRLASTLGTENEES----CTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQR 442 (861)
Q Consensus 380 ~g~~E~f~~p~~l~~~l~~~~~ET----Cas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q~ 442 (861)
.|.. +.+. +..+-|| +.+|+|++..+.-+. ....|.+..+|++ ++++...+
T Consensus 312 -----~W~~---vld~-~~~y~EsSaTAmfaygllkgvr~G~L--d~~~Y~~~A~ka~-~~L~~~i~ 366 (445)
T 3k11_A 312 -----FWHQ---LLDC-NDSYLETSATAIYVYCLAHAINKGWI--DAIAYGPVAQLGW-HAVAGKIN 366 (445)
T ss_dssp -----CEES---BTTC-TTSCEEHHHHHHHHHHHHHHHHHTSS--CHHHHHHHHHHHH-HHHHTTBC
T ss_pred -----chhh---ccCC-CCCCCCccHHHHHHHHHHHHHHcCCC--CHHHHHHHHHHHH-HHHHHhCC
Confidence 3321 1110 2344443 445778887765332 2346999999876 77776654
No 17
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=98.21 E-value=4.3e-06 Score=92.67 Aligned_cols=212 Identities=6% Similarity=-0.143 Sum_probs=119.7
Q ss_pred HHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHHhhhcccccc--cccccccccc-----cccchHHHHHHHHHHcCCHHH
Q 002978 237 KILAGLLDQYTF-ADNTQALKMTKWMVEYFYNRVQNVITKYS--VERHWNSLNE-----ETGGMNDVLYRLYTITQDPKH 308 (861)
Q Consensus 237 kI~aGLld~y~~-tG~~~aL~va~~~ad~~~~r~~~~~~~~~--~~~~~~~l~~-----E~GGmne~L~~LY~~TGd~ry 308 (861)
.++..+..+|+. +|++..+++|.+.++|+.+.+...-.++- ...-+.++.. ..+=+..+|.++|+.|||++|
T Consensus 57 r~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d~dg~~~~~~~~~~~~af~i~al~~~y~~tg~~~~ 136 (388)
T 2gz6_A 57 RQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALTRGGEPLVQPYNIFSDCFAAMAFSQYALASGEEWA 136 (388)
T ss_dssp HHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEECTTSCBCCCCCCHHHHHHHHHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcCCCCcccCCcchHHHHHHHHHHHHHHHHhCCHHH
Confidence 344456678898 89999999999999999987542111110 0000011110 111145789999999999999
Q ss_pred HHHhhhccc---ccccchh------cccCCCCCCCcccCCccchhHHHHHHHhcCCcHHHHHHHHHHHHhhccceeeecC
Q 002978 309 LLLAHLFDK---PCFLGLL------AVQADDISGFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGG 379 (861)
Q Consensus 309 L~lA~~F~~---~~~~~~l------~~~~D~l~g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yvTGG 379 (861)
|+.|+...+ ..+.++. ........+ .+.+.-.+.+...+|++|+|+.|++.++...+.+.+ +.+-..+
T Consensus 137 l~~A~~~~~~i~~~~~d~~g~~~~~~~~~~~~~~--~~~~~~~~~all~l~~~t~d~~~~~~A~~~~~~~~~-~~~~~~~ 213 (388)
T 2gz6_A 137 KDVAMQAYNNVLRRKDNPKGKYTKTYPGTRPMKA--LAVPMILANLTLEMEWLLPQETLENVLAATVQEVMG-DFLDQEQ 213 (388)
T ss_dssp HHHHHHHHHHHHTC--------------CCCCEE--THHHHHHHHHHHHTGGGSCHHHHHHHHHHHHHHHHH-TTEETTT
T ss_pred HHHHHHHHHHHHHHhcCCCcccCcccCCCCCCCC--CCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHH-HHhccCC
Confidence 999876521 1221110 000000111 011122345677789999999999999999998875 3332211
Q ss_pred CCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhcccccCCCCCeEEEe
Q 002978 380 TSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYM 452 (861)
Q Consensus 380 ~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~ 452 (861)
-.-.|+|..+............+......+..+.-++.+++||.+|.+..++++=..+--+.++ +.|.++|.
T Consensus 214 g~~~e~~~~~w~~~~~~~~~~~~pgh~~e~a~lL~~~~~~tgd~~~~~~A~~~~~~~~~~g~d~-~~Gg~~~~ 285 (388)
T 2gz6_A 214 GLMYENVAPDGSHIDCFEGRLINPGHGIEAMWFIMDIARRKNDSKTINQAVDVVLNILNFAWDN-EYGGLYYF 285 (388)
T ss_dssp TEECSEECTTSCCCCSTTTTEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCT-TTCSBCSC
T ss_pred CeEEEEECCCCCCCCCcccCcCCCCHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccC-CCCCEEEe
Confidence 1123554433211110112233444455566667778888999999999988775443334554 43445443
No 18
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=98.07 E-value=5.5e-05 Score=84.35 Aligned_cols=271 Identities=8% Similarity=-0.070 Sum_probs=150.1
Q ss_pred hhHHHHHHHHHHHhc---CChhHHHHHHHHHHHHHHHH-hhcCC-CccccCCcchhhhhhccCCcccccchhHHHHHHHH
Q 002978 169 VGHYLSASAHMWAST---HNVTLKEKMTAVVSALSECQ-NKMGS-GYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLL 243 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t---~D~~L~~k~d~~Vd~L~~~Q-~~~~d-GYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLl 243 (861)
-|..|.+.|.+|..+ ++++.++.++..++.|.+.- ...+. |+...... .++... .-...|..=-+..+++
T Consensus 58 nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~~s~d~----dg~~~~-~~~~lyd~af~~~a~~ 132 (402)
T 1fp3_A 58 QGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCAFVLTR----DGRPVK-VQRSIFSECFYTMAMN 132 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBCSEECT----TSCEEE-CCSSSHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceEEEECC----CCCccc-cccchHHHHHHHHHHH
Confidence 455678888888876 99999999999999999873 31122 56644321 110000 0011222223556788
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHhh-hccccccccc--ccccccccccc-h--HHHHHH---HHHHcCCHHHHHHhhh
Q 002978 244 DQYTFADNTQALKMTKWMVEYFYNRVQ-NVITKYSVER--HWNSLNEETGG-M--NDVLYR---LYTITQDPKHLLLAHL 314 (861)
Q Consensus 244 d~y~~tG~~~aL~va~~~ad~~~~r~~-~~~~~~~~~~--~~~~l~~E~GG-m--ne~L~~---LY~~TGd~ryL~lA~~ 314 (861)
++|++||+++.+++|.++.+++.+.+. .. .++-... -+.... ..++ | .+++.. ||.+|+++ |++.|+.
T Consensus 133 ~~~~atgd~~~~~~A~~l~~~~~~~~~d~~-~G~f~~~~~~~~~~~-~~~~~m~~~~~~l~l~~l~~~~~~~-~~~~a~~ 209 (402)
T 1fp3_A 133 ELWRVTAEARYQSEAVDMMDQIVHWVREDP-SGLGRPQLPGAVASE-SMAVPMMLLCLVEQLGEEDEELAGR-YAQLGHW 209 (402)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHHTCG-GGGCCCCCTTSCCEE-ETHHHHHHHHHHHHHHTTCHHHHHH-THHHHHH
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhccCC-CcccCccccCccCCC-CcchHHHHHHHHHHHHHHHHhcCcH-HHHHHHH
Confidence 999999999999999999999998774 21 1211000 011100 1111 1 245666 77888665 8877665
Q ss_pred c----ccccccchhcc----cCC-CCCCCcccCC-ccchhH--------HHHHHHhcCCcHHHHHHHHHHHHh-hcccee
Q 002978 315 F----DKPCFLGLLAV----QAD-DISGFHANTH-IPVVIG--------SQMRYEVTGDPLYKVTGTFFMDIV-NASHGY 375 (861)
Q Consensus 315 F----~~~~~~~~l~~----~~D-~l~g~Hanth-iP~~~G--------~a~~Y~~TGD~~y~~aa~~fwd~V-~~~h~y 375 (861)
. ... +.+... ..| ..... .+.. -++-.| .+..++++||+.|+++|+...+.+ .+ +++
T Consensus 210 ~~~~~~~~--~~~~~~~~~e~~d~dw~~~-~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~~~~~~~~~-~~~ 285 (402)
T 1fp3_A 210 CARRILQH--VQRDGQAVLENVSEDGEEL-SGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVIDTFLLLPFR-SGW 285 (402)
T ss_dssp HHHHHHTT--EETTTTEECSEEETTSCBC-CHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHTHHHHH-HHB
T ss_pred HHHHHHHH--hCcCCCeEEEEECCCCCcc-CCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHH-Hhc
Confidence 3 222 221100 000 00000 0000 012223 445589999999999999988888 54 333
Q ss_pred e-e-cCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhcccc-cCCCCCeEEEe
Q 002978 376 A-T-GGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQ-RGTEPGVMIYM 452 (861)
Q Consensus 376 v-T-GG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q-~~~d~g~~~Y~ 452 (861)
- - ||.-..-.+ .+.....+.......+...+++.-+-.|++.|||.+|.+.+++.. +-+.... ++..++.|.+.
T Consensus 286 d~~~gg~~~~~~~--~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~-~~~~~~f~D~~~G~w~~~~ 362 (402)
T 1fp3_A 286 DADHGGLFYFQDA--DGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVA-EYTFRQFRDPEYGEWFGYL 362 (402)
T ss_dssp CTTTCSBCSCEET--TSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH-HHHHHHTBCTTTSSBCCEE
T ss_pred cCCCCCEEEeecC--CCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHH-HHHHHhCcCCCCCceEeeE
Confidence 2 2 443211011 011111222334455677777888888999999999999988853 5544432 33234444454
Q ss_pred cc
Q 002978 453 LP 454 (861)
Q Consensus 453 ~P 454 (861)
++
T Consensus 363 ~~ 364 (402)
T 1fp3_A 363 NR 364 (402)
T ss_dssp CT
T ss_pred CC
Confidence 44
No 19
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=98.04 E-value=4.7e-05 Score=85.41 Aligned_cols=193 Identities=11% Similarity=0.016 Sum_probs=115.4
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHH-hhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 170 GHYLSASAHMWASTHNVTLKEKMTAVVSALSECQ-NKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q-~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
...|-|++. |..|+|++.++++.++.+.|.+.- +..+.||..++... ++ ....-.+.-.+|.+++ ++..|++
T Consensus 116 Af~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~----~~-~~~~~~~n~~m~l~ea-ll~L~~~ 188 (402)
T 3gt5_A 116 AFVMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQ----WN-FTRYRGQNANMHMCEA-MLAAYEA 188 (402)
T ss_dssp HHHHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----CC-BCSCEEHHHHHHHHHH-HHHHHHH
T ss_pred HHHHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCC----CC-CCCCCCCCHHHHHHHH-HHHHHHh
Confidence 456777777 666999999999999999988763 21133554333221 11 1111112223555554 6799999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhcccc----cccccccccc---------------cccccchHH---HHHHHHHHcCCH
Q 002978 249 ADNTQALKMTKWMVEYFYNRVQNVITK----YSVERHWNSL---------------NEETGGMND---VLYRLYTITQDP 306 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~~~r~~~~~~~----~~~~~~~~~l---------------~~E~GGmne---~L~~LY~~TGd~ 306 (861)
||+++.++.+.++++.+.+++.+.-.+ .-... |... ..+.|-+.| .|.+++++||++
T Consensus 189 tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~d-w~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~ 267 (402)
T 3gt5_A 189 SGEQRYLERALVLADRITRRQAAKADGLVWEHYDMR-WEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVE 267 (402)
T ss_dssp HCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTT-SCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCT
T ss_pred hCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCC-CCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcH
Confidence 999999999999999998776431111 00011 2111 012343333 478899999999
Q ss_pred HHHHHhhhccccc---ccchhccc----CCCCCCCccc------CCccchhHHHHHHHhcCCcHHHHHHHHHHHHhhc
Q 002978 307 KHLLLAHLFDKPC---FLGLLAVQ----ADDISGFHAN------THIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNA 371 (861)
Q Consensus 307 ryL~lA~~F~~~~---~~~~l~~~----~D~l~g~Han------thiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 371 (861)
+|++.|+.+.+.. ..++...+ .|. .+.-.. .|...++|++.+|+.|||+.|++.+++.|+.+.+
T Consensus 268 ~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~-~g~~~~~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 344 (402)
T 3gt5_A 268 WLVPVARSLFDVAVARSWDAVRGGLCYGFAP-DGTICDDDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYAWQ 344 (402)
T ss_dssp THHHHHHHHHHHHHHHHBCTTTCSBCSEECT-TSCEEECCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcEEEEEcC-CCCeeeCCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 9999998753211 11111000 000 000000 0111247789999999999999999999888753
No 20
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=97.79 E-value=0.00042 Score=77.33 Aligned_cols=242 Identities=9% Similarity=0.012 Sum_probs=136.9
Q ss_pred cchhHHH-HHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCccc-ccchhHH-HHHHHH
Q 002978 167 HFVGHYL-SASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWA-PYYTIHK-ILAGLL 243 (861)
Q Consensus 167 h~~Gh~L-sAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~-pyYt~Hk-I~aGLl 243 (861)
|=.|-.+ ..++..|..|+|++.++.+....+.|...=. ...|++-.+.. +. ...|. +..-=.+ .+.+|.
T Consensus 87 HD~Gf~~~~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~i~sw~~-----~~--~~~~~~~~iID~mmni~~L~ 158 (377)
T 2ahf_A 87 HNIGFLYSLSAKAQWIVEKDESARKLALDAADVLMRRWR-ADAGIIQAWGP-----KG--DPENGGRIIIDCLLNLPLLL 158 (377)
T ss_dssp STHHHHHHTTHHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCBSS-----TT--CTTTTTEEEGGGGGGHHHHH
T ss_pred CCchHhhHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCC-CCCCeEEeccC-----CC--CCCCCceEEechHHHHHHHH
Confidence 4456533 3577788999999999999888888765322 13366665431 00 11121 1110011 144676
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHhhhc---------c---ccccccc--cccccccc---c--cchHHHHHHHHHHcC
Q 002978 244 DQYTFADNTQALKMTKWMVEYFYNRVQNV---------I---TKYSVER--HWNSLNEE---T--GGMNDVLYRLYTITQ 304 (861)
Q Consensus 244 d~y~~tG~~~aL~va~~~ad~~~~r~~~~---------~---~~~~~~~--~~~~l~~E---~--GGmne~L~~LY~~TG 304 (861)
-+++.+|+++.+++|++.++.+.+.+-+. . .+....+ ++...+.. + +-+..++..||+.|+
T Consensus 159 ~A~~~~gd~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~~t~qG~~dds~WaRGqAw~i~gl~~ly~~T~ 238 (377)
T 2ahf_A 159 WAGEQTGDPEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRGGTHQGNTDGSTWTRGQAWGIYGFALNSRYLG 238 (377)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEEECSSSSSTTSCBHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeCCCcCCcCCcchhHHHHHHHHHHHHHHHHHHC
Confidence 78899999999999999999999875221 0 0000000 01111110 0 124578999999999
Q ss_pred CHHHHHHhhhcccccccchhcccCCCCCCCcc-------cCCcc-----chhHHHHHHHhcC-----CcHHHHHHHHHHH
Q 002978 305 DPKHLLLAHLFDKPCFLGLLAVQADDISGFHA-------NTHIP-----VVIGSQMRYEVTG-----DPLYKVTGTFFMD 367 (861)
Q Consensus 305 d~ryL~lA~~F~~~~~~~~l~~~~D~l~g~Ha-------nthiP-----~~~G~a~~Y~~TG-----D~~y~~aa~~fwd 367 (861)
|++||+.|+.+.+- ++..+. .|..+-.+. +...| .+.|..+++++++ ++.|+++|++..+
T Consensus 239 d~~yL~~A~~la~~-~l~~~~--~d~~pywd~~~~~~~~~~~d~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~ 315 (377)
T 2ahf_A 239 NADLLETAKRMARH-FLARVP--EDGVVYWDFEVPQEPSSYRDSSASAITACGLLEIASQLDESDPERQRFIDAAKTTVT 315 (377)
T ss_dssp CHHHHHHHHHHHHH-HHTTCC--TTSSCBSBTTSCCCTTSCBCHHHHHHHHHHHHHHHHTSCTTCHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHH-HHHhhH--HhCCcccccCCCccCCCccCCCHHHHHHHHHHHHHHhcCccccchHHHHHHHHHHHH
Confidence 99999998765221 000000 111100110 11123 1367788899996 6789999999999
Q ss_pred HhhccceeeecCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCC
Q 002978 368 IVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKE 422 (861)
Q Consensus 368 ~V~~~h~yvTGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD 422 (861)
.+.+...-..|..+.+.-.+.-+..+. .....+|..|+--++.+-|.++.++
T Consensus 316 ~l~~~y~~~~~~~~~g~L~h~~~~~~~---~~~~d~~~~ygDy~~~Eal~r~~~~ 367 (377)
T 2ahf_A 316 ALRDGYAERDDGEAEGFIRRGSYHVRG---GISPDDYTIWGDYYYLEALLRLERG 367 (377)
T ss_dssp HHHHHTBCCCCSSCCCSBSCBCSBTTT---TBSSSBCBHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHhcCCCCCCCeEEecccccCCC---CCCCCcCccHHHHHHHHHHHHHHcC
Confidence 987532222233333333333233232 2245667888777777777766543
No 21
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.74 E-value=0.00024 Score=78.95 Aligned_cols=171 Identities=12% Similarity=0.033 Sum_probs=102.7
Q ss_pred HHHHHHHHHHHHHHHhhhcccccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccccchhcccCCCCC-
Q 002978 254 ALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLGLLAVQADDIS- 332 (861)
Q Consensus 254 aL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~~~~l~~~~D~l~- 332 (861)
....+.+|+|++.++..+..... ...| +=+.|-|..+|.++|+.|||++|++.|+...+.- +.. .+ .+.
T Consensus 13 ~~~~~~~~~~~~~~~~~~~~~~~-~~~W----~w~~G~~~~gl~~~y~~tgd~~y~~~a~~~~~~~-~~~--~g--~l~~ 82 (373)
T 1nc5_A 13 PLTYAEALANTIMNTYTVEELPP-ANRW----HYHQGVFLCGVLRLWEATGEKRYFEYAKAYADLL-IDD--NG--NLLF 82 (373)
T ss_dssp HHHHHHHHHHHHHHHCCTTTSSS-TTCC----CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH-BCT--TC--CBCC
T ss_pred hHHHHHHHHHHHHHhCCCcccCC-CCCc----chhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH-hCC--CC--cccC
Confidence 45788999999998764321110 0111 0124556789999999999999999998653321 111 00 110
Q ss_pred -CCcccCCccchhHHHHHHHhcCCcHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCcCcccchhh--HHH
Q 002978 333 -GFHANTHIPVVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTT--YNM 409 (861)
Q Consensus 333 -g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yvTGG~g~~E~f~~p~~l~~~l~~~~~ETCas--~nm 409 (861)
..+ -.+..+..+...+|++|||++|++++...++.+...---..||+ |..+ . .....-|-. .++
T Consensus 83 ~~~~-lDd~~~g~~ll~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~f-----w~~~----~---~~~~~w~D~l~m~~ 149 (373)
T 1nc5_A 83 RRDE-LDAIQAGLILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGF-----WHKD----G---YPYQMWLDGLYMGG 149 (373)
T ss_dssp CTTC-GGGTGGGGGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCB-----CSCT----T---STTEEETHHHHHHH
T ss_pred CCCC-cchHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCe-----eccC----C---CCCeEEeCcHHHHH
Confidence 001 11223556788999999999999999999999853211112322 3221 0 111222322 233
Q ss_pred HHHHHhhhcccCCchHHHHHHHHHhhhhcccccCCCCCeE
Q 002978 410 LKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVM 449 (861)
Q Consensus 410 lkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q~~~d~g~~ 449 (861)
. +.-++.++|||.+|.|.+++.+-...--..++ +.|.+
T Consensus 150 p-~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~-~tGl~ 187 (373)
T 1nc5_A 150 P-FALKYANLKQETELFDQVVLQESLMRKHTKDA-KTGLF 187 (373)
T ss_dssp H-HHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCT-TTSCB
T ss_pred H-HHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCC-CCCCE
Confidence 3 44558999999999999999775554444554 55544
No 22
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.68 E-value=0.00038 Score=77.83 Aligned_cols=227 Identities=11% Similarity=0.022 Sum_probs=124.4
Q ss_pred CChhHHHHHHHHHHHHHHHHhhcCCCccc-cCCcchhhhhhccCCcccccchhHHHHHHHHHHHHHcCChhHHHHHHHHH
Q 002978 184 HNVTLKEKMTAVVSALSECQNKMGSGYLS-AFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMV 262 (861)
Q Consensus 184 ~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~-a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~tG~~~aL~va~~~a 262 (861)
..++++++++.+++.|...++ .+|.+. .+++.....- ..-..|. | +.-..+.||...|+.||+++.++.+.+..
T Consensus 23 ~~~~~~~~l~~~~~~l~~~~~--~~~~f~~~~~~~~~~d~-k~~~~W~-W-t~G~~~~gl~~~ye~Tgd~~y~~~a~~~~ 97 (382)
T 3pmm_A 23 ARSELQALIRNVTQNLVNIKD--ESGQFLLRLDDGRVIDT-KGWAGWE-W-THGVGLYGIYQYYQQTGDIEMRDIIDRWF 97 (382)
T ss_dssp CHHHHHHHHHHHHHHHHHCCC--TTCTTCEECTTSCEECS-SSTTSCS-H-HHHHHHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHhccC--ccccccccCCccccccC-CCCcCcc-c-cHHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 356889999999999977766 545432 2221110000 1112221 2 33335668899999999999999999877
Q ss_pred HHHHHHhhhcccccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccc---cccchhcccCCCCCCCccc--
Q 002978 263 EYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKP---CFLGLLAVQADDISGFHAN-- 337 (861)
Q Consensus 263 d~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~---~~~~~l~~~~D~l~g~Han-- 337 (861)
+.+.+. +.+. .+-..+.+-.+|.+||++|||++|++.|....+. .+......+ + .|..
T Consensus 98 ~~~~~~------~~~~------~n~D~~~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Gg---f--~~~~~~ 160 (382)
T 3pmm_A 98 ADRFAE------GATT------KNVNTMAPFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGG---M--QHMTLA 160 (382)
T ss_dssp HHHHHH------CCCC------CCTTTTTTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGC---B--CCCCSS
T ss_pred HHHHcC------CCCc------CcccchHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCC---e--eeecCC
Confidence 755432 1111 0111222335789999999999999998765321 111110000 0 1210
Q ss_pred --CCccc-----hh---HHHHHHHhcCCcHHHHHHHHHHHHhhcccee--eecCCCCCCCCCCCcccccCCCcCcccc--
Q 002978 338 --THIPV-----VI---GSQMRYEVTGDPLYKVTGTFFMDIVNASHGY--ATGGTSAGEFWSDPKRLASTLGTENEES-- 403 (861)
Q Consensus 338 --thiP~-----~~---G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~y--vTGG~g~~E~f~~p~~l~~~l~~~~~ET-- 403 (861)
..-.+ .+ -.+..|++|||++|++.+.+-++...+ ++| .||- .++.-..... ....++
T Consensus 161 ~~~~~~~WiDgl~M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~-~l~D~~tGl-----~~h~~~~~~~---~~~~~~~W 231 (382)
T 3pmm_A 161 EENHQQMWDDTLMMTVLPLAKIGKLLNRPQYVEEATYQFLLHVQ-NLMDRETGL-----WFHGWNYEGR---HNFARARW 231 (382)
T ss_dssp CCCTTEEETTHHHHTHHHHHHHHHHTTCHHHHHHHHHHHHHHHH-HHBCTTTSC-----BCSEEETTTT---BCTTCCCB
T ss_pred CCCCCcEEecchhhhHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HccCCCCCC-----eeeeccCCCC---CCCCccee
Confidence 00111 12 257789999999999887665555543 333 2232 1111000000 001122
Q ss_pred -----hhhHHHHHHHHhh-h--cccCCchHHHHHHHHHhhhhccccc
Q 002978 404 -----CTTYNMLKVSRHL-F--RWTKEMVYADYYERALTNGVLSIQR 442 (861)
Q Consensus 404 -----Cas~nmlkl~~~L-f--~~tgD~~YaD~~ERaLyN~iLa~q~ 442 (861)
=..+++..+.+.| + ..+++.+|.+.+++.+ ++++.-|+
T Consensus 232 aRG~gW~~~gl~~~l~~l~~p~~~~~~~~~~~~~~~~a-~~~~~~q~ 277 (382)
T 3pmm_A 232 ARGNSWLTMVIPDFLELVDLPEGNAVRRYLITVLDAQI-AALAECQD 277 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCTTCHHHHHHHHHHHHHH-HHHHHHCC
T ss_pred cccccHHHHHHHHHHHhhcCCcchhhHHHHHHHHHHHH-HHHHHcCC
Confidence 3446666666653 1 2245577888887766 88888886
No 23
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.62 E-value=0.00049 Score=77.31 Aligned_cols=235 Identities=12% Similarity=0.019 Sum_probs=134.9
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHHcCChhH
Q 002978 175 ASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQA 254 (861)
Q Consensus 175 AlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~tG~~~a 254 (861)
.++..|..|+|++.++.+....+.|...=. ...|++-+.... -+.. ...+|-- +.+ -+.+|..+++.+|+++.
T Consensus 122 s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~-~~~g~iqsw~~~-~~~~--~~~~iID-~~m--ni~~L~~A~~~~gd~~y 194 (397)
T 2zzr_A 122 SCTAEYRINGDVKALEATIKAADKLMERYQ-EKGGFIQAWGEL-GYKE--HYRLIID-CLL--NIQLLFFAYEQTGDEKY 194 (397)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHHHHHTTEE-TTTTEECCSSST-TCGG--GCEEETT-HHH--HTHHHHHHHHHHCCHHH
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhC-cCCCEEEecccC-CCCC--CCceeec-hHh--HHHHHHHHHHHhCCHHH
Confidence 367788899999999999999998864321 145777665310 0000 0111110 111 13456678899999999
Q ss_pred HHHHHHHHHHHHHHhhhc----cc--------ccccc--ccccccccc---c--cchHHHHHHHHHHcCCHHHHHHhhhc
Q 002978 255 LKMTKWMVEYFYNRVQNV----IT--------KYSVE--RHWNSLNEE---T--GGMNDVLYRLYTITQDPKHLLLAHLF 315 (861)
Q Consensus 255 L~va~~~ad~~~~r~~~~----~~--------~~~~~--~~~~~l~~E---~--GGmne~L~~LY~~TGd~ryL~lA~~F 315 (861)
+++|++.++.+.+.+-+. .. +.... .++...+.. + .-+..++..||+.|||++||++|+.+
T Consensus 195 ~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~~t~qGy~dds~WaRGqAw~i~gl~~lY~~T~d~~yL~~A~~l 274 (397)
T 2zzr_A 195 RQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKGVTRQGYSDESSWARGQAWGIYGIPLSYRKMKDYQQIILFKGM 274 (397)
T ss_dssp HHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEEECTTSSSTTSCBHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccCCcccccCcchhhHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 999999999999766220 00 00000 011111110 0 11457899999999999999999765
Q ss_pred ccccccchhcccCCCCCCCcc-cCCc------c-----chhHHHHHHHhcCC---cH--HHHHHHHHHHHhhccceeeec
Q 002978 316 DKPCFLGLLAVQADDISGFHA-NTHI------P-----VVIGSQMRYEVTGD---PL--YKVTGTFFMDIVNASHGYATG 378 (861)
Q Consensus 316 ~~~~~~~~l~~~~D~l~g~Ha-nthi------P-----~~~G~a~~Y~~TGD---~~--y~~aa~~fwd~V~~~h~yvTG 378 (861)
.+- +...+. .|..+-.+. ...+ | .+.|..+++++|++ ++ |+++|+...+.+.....-..|
T Consensus 275 a~~-~l~~~~--~d~~pywdt~~~~~~~~~~D~Sa~aiaA~~Ll~L~~~~~~~~~~~~~Y~~~A~~~l~~l~~~y~~~~~ 351 (397)
T 2zzr_A 275 TNY-FLNRLP--EDKVSYWDLIFTDGSGQPRDTSATATAVCGIHEMLKYLPEVDPDKETYKYAMHTMLRSLIEQYSNNEL 351 (397)
T ss_dssp HHH-HHHTCC--TTSCCBSBTTCCTTSCCCBCHHHHHHHHHHHHHHHTTSCTTCTTHHHHHHHHHHHHHHHHHHTBCCCC
T ss_pred HHH-HHHhhH--HhCCccccCCCCCCCCCcCCCCHHHHHHHHHHHHHHhcCccchhhHHHHHHHHHHHHHHHHHHhccCC
Confidence 221 000000 111100110 0011 2 13677888999987 78 999999999998753222223
Q ss_pred CCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCC
Q 002978 379 GTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKE 422 (861)
Q Consensus 379 G~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD 422 (861)
..+.+.-.+.-+..+. ......|.+|+--++.+-|.++.++
T Consensus 352 ~~~~glL~h~~~~~~~---~~~~d~~~~~gDYy~~Eal~r~~~~ 392 (397)
T 2zzr_A 352 IAGRPLLLHGVYSWHS---GKGVDEGNIWGDYYYLEALIRFYKD 392 (397)
T ss_dssp CTTCCSBCCEEEETTT---TEEEEECBHHHHHHHHHHHHHHHSC
T ss_pred CCCCceeeeceeeCCC---CCCCCCCcchHHHHHHHHHHHHhcC
Confidence 3333333333222232 2466778888888888888877664
No 24
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.56 E-value=0.00058 Score=77.00 Aligned_cols=192 Identities=12% Similarity=0.076 Sum_probs=112.3
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhc-CCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 170 GHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKM-GSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~-~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
+..+.|++. |..|+|++.++.+.++++.+.+.=... ..||..+.... ++...+.-.+.-.+|.+ .+++..|++
T Consensus 114 Af~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d----~~~~~~~~~~n~~m~~~-~al~~l~~~ 187 (421)
T 2zbl_A 114 FFALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEA----FSQTEDYRGGNANMHAV-EAFLIVYDV 187 (421)
T ss_dssp HHHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTT----SCSBCSCEEHHHHHHHH-HHHHHHHHT
T ss_pred HHHHHHHHH-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCC----CCcccccCCCcHHHHHH-HHHHHHHHh
Confidence 456678888 889999999999999998887643211 23666554321 11111111111223444 457799999
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhcccc-c---ccccccccccc---------------cccc-h--HHHHHHHHHHc---
Q 002978 249 ADNTQALKMTKWMVEYFYNRVQNVITK-Y---SVERHWNSLNE---------------ETGG-M--NDVLYRLYTIT--- 303 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~~~r~~~~~~~-~---~~~~~~~~l~~---------------E~GG-m--ne~L~~LY~~T--- 303 (861)
+|+++.++.|.++++.+.+++.+...+ + -.+. |..+.+ +.|= + ...|.++|+.+
T Consensus 188 tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~-~~~~~~~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~~~~ 266 (421)
T 2zbl_A 188 THDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQ-WNPIRDYNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAALEAR 266 (421)
T ss_dssp TCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTT-SCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHHHHT
T ss_pred hCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCc-cccchhccCCCcccccccCCCCCChHHHHHHHHHHHHHHcccc
Confidence 999999999999999988655321100 0 0111 111110 1221 1 24688999999
Q ss_pred CC--H-HHHHHhhhcccc---cccchh-cccCCCCCCCcccCC-----------ccchhHHHHHHHhcCCcHHHHHHHHH
Q 002978 304 QD--P-KHLLLAHLFDKP---CFLGLL-AVQADDISGFHANTH-----------IPVVIGSQMRYEVTGDPLYKVTGTFF 365 (861)
Q Consensus 304 Gd--~-ryL~lA~~F~~~---~~~~~l-~~~~D~l~g~Hanth-----------iP~~~G~a~~Y~~TGD~~y~~aa~~f 365 (861)
|| + +|++.|..+.+. .+.++. ..+ .+........ ...+.+.+.+|++|||+.|++.++..
T Consensus 267 ~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG--~~~~~~~~g~~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~~~ 344 (421)
T 2zbl_A 267 FETPPAWLLEDAKGLFHATIRDAWAPDGADG--FVYSVDWDGKPIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQKW 344 (421)
T ss_dssp TCCCCTHHHHHHHHHHHHHHHHHBSCSSSSS--BCSCBCTTSCBSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
T ss_pred cccchHHHHHHHHHHHHHHHHHhcCCCCCCc--EEEeecCCCCccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 66 5 899999765321 111111 000 0000000011 11246788999999999999999999
Q ss_pred HHHhh
Q 002978 366 MDIVN 370 (861)
Q Consensus 366 wd~V~ 370 (861)
|+.+.
T Consensus 345 ~~~~~ 349 (421)
T 2zbl_A 345 WDYCI 349 (421)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98885
No 25
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=97.41 E-value=0.00095 Score=74.33 Aligned_cols=187 Identities=13% Similarity=0.082 Sum_probs=107.6
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHH---HH
Q 002978 170 GHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLD---QY 246 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld---~y 246 (861)
+.++-|++..|..|+|++.++.+.++++.+.+.-...+.|++.+... .+...+.. -..+|.+.+ ++. .|
T Consensus 125 af~~~a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f~~~~~----~~~~~~~~---~~~m~~~~~-~l~l~~l~ 196 (402)
T 1fp3_A 125 CFYTMAMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLGRPQLP----GAVASESM---AVPMMLLCL-VEQLGEED 196 (402)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGCCCCCT----TSCCEEET---HHHHHHHHH-HHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCcccCcccc----CccCCCCc---chHHHHHHH-HHHHHHHH
Confidence 56888999999999999999999999998887653125677643211 11111110 011244433 334 45
Q ss_pred HHcCChhHHHHHHHHHHHHHHHhhh---ccccccccccccccc------ccccchHH---HHHHHHHHcCCHHHHHHhhh
Q 002978 247 TFADNTQALKMTKWMVEYFYNRVQN---VITKYSVERHWNSLN------EETGGMND---VLYRLYTITQDPKHLLLAHL 314 (861)
Q Consensus 247 ~~tG~~~aL~va~~~ad~~~~r~~~---~~~~~~~~~~~~~l~------~E~GGmne---~L~~LY~~TGd~ryL~lA~~ 314 (861)
..++++ .++.+.++++.+.+++.. .+....+. -|.... .+.|=+.+ .|+++++++||++|++.|+.
T Consensus 197 ~~~~~~-~~~~a~~~~~~~~~~~~~~~~~~~e~~d~-dw~~~~~~~g~~~~pgh~ie~~wlL~~a~~~~~~~~~l~~A~~ 274 (402)
T 1fp3_A 197 EELAGR-YAQLGHWCARRILQHVQRDGQAVLENVSE-DGEELSGCLGRHQNPGHALEAGWFLLRHSSRSGDAKLRAHVID 274 (402)
T ss_dssp HHHHHH-THHHHHHHHHHHHTTEETTTTEECSEEET-TSCBCCHHHHHEECHHHHHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HhcCcH-HHHHHHHHHHHHHHHhCcCCCeEEEEECC-CCCccCCCCCCCCCCCcHHHHHHHHHHHHHHcCChHHHHHHHH
Confidence 566443 677888888877654211 00000001 121110 11121222 68899999999999999976
Q ss_pred ccccc----ccchhcccCCCCCCCcc---cCCcc---------------chhHHHHHHHhcCCcHHHHHHHHHHHHhhc
Q 002978 315 FDKPC----FLGLLAVQADDISGFHA---NTHIP---------------VVIGSQMRYEVTGDPLYKVTGTFFMDIVNA 371 (861)
Q Consensus 315 F~~~~----~~~~l~~~~D~l~g~Ha---nthiP---------------~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 371 (861)
..+.. ..++.. ..+ .|. ..+.+ .+.|++.+|++|||+.|++.++..|+.+.+
T Consensus 275 ~~~~~~~~~~~d~~~---gg~--~~~~~~~g~~~~~l~d~~~~~W~qaea~~a~l~ly~~tgd~~yl~~a~~~~~~~~~ 348 (402)
T 1fp3_A 275 TFLLLPFRSGWDADH---GGL--FYFQDADGLCPTQLEWAMKLWWPHSEAMIAFLMGYSESGDPALLRLFYQVAEYTFR 348 (402)
T ss_dssp HHTHHHHHHHBCTTT---CSB--CSCEETTSCCCSSTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhccCCC---CCE--EEeecCCCCccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 43211 111100 001 111 01111 267899999999999999999999988764
No 26
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=96.63 E-value=0.042 Score=64.39 Aligned_cols=252 Identities=13% Similarity=0.056 Sum_probs=132.0
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhc------------cCCcccccc-----h-hHHHHHHHHHHHH
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEA------------LKPVWAPYY-----T-IHKILAGLLDQYT 247 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~------------l~~~W~pyY-----t-~HkI~aGLld~y~ 247 (861)
+.+++.+..-+|.|.+||. ++|++-.- ..+.|.. -.....+.| + .-++.|+|-.+++
T Consensus 190 ~~lldE~rWg~D~llkm~~--~~g~~y~q---Vgd~W~~d~~~R~~~~~~~~~~~~~~~y~~~~~~~agl~aAALA~Asr 264 (586)
T 3h7l_A 190 TRLIEEALFGADFLVRMQN--EKGFFYMT---VFDKWSKDTAQREICAYETQLGHKFDDYQAGFRQGGGVAIAALAAASR 264 (586)
T ss_dssp HHHHHHHHHHHHHHHHTBC--TTSCBBCE---EECTTCCCGGGCEEEEEETTTTEEESCCBCCGGGTHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhccc--CCCeEEEE---ecCCCCCCCCccccccccCCCCCCCcceecCCCCcHHHHHHHHHHHhc
Confidence 4777888888999999999 88885431 1111211 001111111 1 1123444444444
Q ss_pred H-----cCChhHHHHHHHHHHHHHHHhhhcccccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhccc-----
Q 002978 248 F-----ADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDK----- 317 (861)
Q Consensus 248 ~-----tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~----- 317 (861)
. .+.++.|+.|+++.+|+.+....+.. ..- .-...|+ -+..+.+|||+.|||++||+.|..+.+
T Consensus 265 vf~d~~~~a~~~L~aA~~a~~fa~~~~~~y~~----~g~-~~~~De~-~~~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~ 338 (586)
T 3h7l_A 265 LGVHGEYDQQKYRNAAENGYWHLKEHNTQYLN----DGE-ENIIDEY-CALLASVELFKATKETRYLEESRLWAQRLVAR 338 (586)
T ss_dssp SSSCSSSCHHHHHHHHHHHHHHHHHHHHHHST----TSC-CCHHHHH-HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTT
T ss_pred ccCCCCcChHHHHHHHHHHHHHHHhcCccccC----CCC-ccchhHH-HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHh
Confidence 5 45678999999999999875433211 100 1112343 246789999999999999999876311
Q ss_pred ------ccccchhcccCCCC-CCCcccCCccchhHHHHHHHhcCCcHHHHHHH----HHHH---Hhhcc--------cee
Q 002978 318 ------PCFLGLLAVQADDI-SGFHANTHIPVVIGSQMRYEVTGDPLYKVTGT----FFMD---IVNAS--------HGY 375 (861)
Q Consensus 318 ------~~~~~~l~~~~D~l-~g~HanthiP~~~G~a~~Y~~TGD~~y~~aa~----~fwd---~V~~~--------h~y 375 (861)
..++|.-. .|.- +..|+....--++..++..++++|+.+++.++ +..+ .++++ +.|
T Consensus 339 ~~~~~~~g~~w~~~--d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg~~~~~ 416 (586)
T 3h7l_A 339 QMSDEQIQHFWSAN--QDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFGYPRQY 416 (586)
T ss_dssp EECCSSCSSEEBSS--SSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSCCCCEE
T ss_pred ccCCccCCCcCCCc--ccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccccHHHH
Confidence 12222211 1111 12232221112345667788999874444333 3333 22211 145
Q ss_pred eecCCC-CCCCCCCCcccccCCCcCc-ccchhhHHHHHHHHhhhcccCC----chHHHHHHHHHhhhhcccccCCCCCeE
Q 002978 376 ATGGTS-AGEFWSDPKRLASTLGTEN-EESCTTYNMLKVSRHLFRWTKE----MVYADYYERALTNGVLSIQRGTEPGVM 449 (861)
Q Consensus 376 vTGG~g-~~E~f~~p~~l~~~l~~~~-~ETCas~nmlkl~~~Lf~~tgD----~~YaD~~ERaLyN~iLa~q~~~d~g~~ 449 (861)
+.|..+ ....|+-|..-.. .--- .+.=...|...++..-+.+++| .+|.|.....+ |=|||.- | -.+
T Consensus 417 ~~~~~~~~~~~y~~p~~~~~--~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~ql-dyiLG~N-p---~~~ 489 (586)
T 3h7l_A 417 VKGVNESKRDAFFVAHNNES--GYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDAL-NWIVGLN-P---YDM 489 (586)
T ss_dssp ECCTTSCCEEESSCCSSSTT--SSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHH-HHHBTCS-T---TCC
T ss_pred hhhhccccccccccccCCCC--CCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhh-hhhccCC-C---CCC
Confidence 533222 2233333221100 0111 2333345566666667778888 88999888776 7788862 3 234
Q ss_pred EEeccCCC
Q 002978 450 IYMLPLGR 457 (861)
Q Consensus 450 ~Y~~PL~~ 457 (861)
.|+...+.
T Consensus 490 s~v~G~G~ 497 (586)
T 3h7l_A 490 CMLDGHGR 497 (586)
T ss_dssp BCBTTSSS
T ss_pred ccEEeeCC
Confidence 55555443
No 27
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=95.98 E-value=0.045 Score=62.75 Aligned_cols=200 Identities=13% Similarity=0.047 Sum_probs=115.6
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhhcccccccc-----------cccc----cccccccchHHHHHHHHHH
Q 002978 238 ILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVE-----------RHWN----SLNEETGGMNDVLYRLYTI 302 (861)
Q Consensus 238 I~aGLld~y~~tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~-----------~~~~----~l~~E~GGmne~L~~LY~~ 302 (861)
++-|||.+|.++|++..|+.|+.+||.+..-|.. ..+.+.. ..|. ..-.|.|.+..-+.+|.++
T Consensus 110 ~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~~LS~l 188 (478)
T 1nxc_A 110 FVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHT-PSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFMHLSHL 188 (478)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHHHHHHH
T ss_pred hhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccccCCCCcccCCCCcccccccchhhhHHHHHHH
Confidence 6889999999999999999999999999876642 1111110 0111 1123566677788999999
Q ss_pred cCCHHHHHHhhhcccccccchhc-------ccCCCCCCCcccCCccch-------hHHHHHHHhcC--CcHHHHHHHHHH
Q 002978 303 TQDPKHLLLAHLFDKPCFLGLLA-------VQADDISGFHANTHIPVV-------IGSQMRYEVTG--DPLYKVTGTFFM 366 (861)
Q Consensus 303 TGd~ryL~lA~~F~~~~~~~~l~-------~~~D~l~g~HanthiP~~-------~G~a~~Y~~TG--D~~y~~aa~~fw 366 (861)
|||++|.+.|++..+. ++... ...|.-.+...+.++-+- +-..+.|.++| |+.|++.-....
T Consensus 189 TGd~~Y~~~a~~~~~~--l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d~~~~~m~~~a~ 266 (478)
T 1nxc_A 189 SGDPVFAEKVMKIRTV--LNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTDLEAKKMYFDAV 266 (478)
T ss_dssp HCCTHHHHHHHHHHHH--HHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCCHHHHHHHHHHH
T ss_pred HCChHHHHHHHHHHHH--HHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 9999999999886321 11000 001111111112222111 22567788887 678888877778
Q ss_pred HHhhccceeeecCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHH------Hhhhhccc
Q 002978 367 DIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERA------LTNGVLSI 440 (861)
Q Consensus 367 d~V~~~h~yvTGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERa------LyN~iLa~ 440 (861)
+.|.+ |+.-.. . .+-.|.....-....+....=+|=.-+|+-|.-.++......+|++..+.. .|+....+
T Consensus 267 ~~i~~-~l~~~~-~-~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~~y~~~~tg 343 (478)
T 1nxc_A 267 QAIET-HLIRKS-S-GGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHESYNRTYVK 343 (478)
T ss_dssp HHHHH-HTEEEC-T-TSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHHHHHTSSSS
T ss_pred HHHHH-HhcccC-C-CCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHHHHHhcccC
Confidence 87764 433210 0 000110000000001233456899999998888777665556788777654 45555554
Q ss_pred ccC
Q 002978 441 QRG 443 (861)
Q Consensus 441 q~~ 443 (861)
..|
T Consensus 344 l~P 346 (478)
T 1nxc_A 344 LGP 346 (478)
T ss_dssp SCC
T ss_pred CCC
Confidence 443
No 28
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.93 E-value=0.043 Score=62.43 Aligned_cols=199 Identities=10% Similarity=0.077 Sum_probs=107.6
Q ss_pred chhHHHHHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhh---ccc--cccccc-----ccccccccccchHHHHHHHHHH
Q 002978 233 YTIHKILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQN---VIT--KYSVER-----HWNSLNEETGGMNDVLYRLYTI 302 (861)
Q Consensus 233 Yt~HkI~aGLld~y~~tG~~~aL~va~~~ad~~~~r~~~---~~~--~~~~~~-----~~~~l~~E~GGmne~L~~LY~~ 302 (861)
|+.-.++.||...|+.||+++.++.+.+.+|++.+.+.. ... +....+ .-..++. .|-|..+|+++|+.
T Consensus 82 y~~Gv~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~~~~~~LDD-~g~~~~~Li~lY~~ 160 (445)
T 3k11_A 82 YEWGVTYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQILTPHALDD-AGAVCTAMIKLRLK 160 (445)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHSCCSGGG-THHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccccCCCcchh-HHHHHHHHHHHHHh
Confidence 455567889999999999999999999999988753210 000 000000 0112222 45577899999999
Q ss_pred cCCHHHHHHhhhcccc---cccchhcccCCCCCCC-cccCCcc------chhH---HHHHHHhcCCcH--HHHHHHHHHH
Q 002978 303 TQDPKHLLLAHLFDKP---CFLGLLAVQADDISGF-HANTHIP------VVIG---SQMRYEVTGDPL--YKVTGTFFMD 367 (861)
Q Consensus 303 TGd~ryL~lA~~F~~~---~~~~~l~~~~D~l~g~-HanthiP------~~~G---~a~~Y~~TGD~~--y~~aa~~fwd 367 (861)
|+|++|++.|...-+- .+.. ..-.++ |....-. +.++ .+..+++|||++ |.+.+.+-+.
T Consensus 161 T~d~~yl~~a~~~ad~L~~~~pR------t~~Ggf~h~~~~~~q~WiD~lyM~~pfla~~~~~tgd~~~~y~d~A~~q~~ 234 (445)
T 3k11_A 161 DESLPVDGLIQNYFDFIINKEYR------LADGTFARNRPQRNTLWLDDMFMGIPAVAQMSRYDKEAKNKYLAEAVKQFL 234 (445)
T ss_dssp CTTCCCHHHHHHHHHHHHHTSCB------CTTCCBCBCSSSTTEEETHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHHHHcCCC------CCCCceeecCCCCCceEecchhhHHHHHHHHHHHHCCcchHHHHHHHHHHH
Confidence 9999999998754210 1100 000111 3211111 1133 466689999999 9877766555
Q ss_pred Hhhcccee--eecCCCCCCCCCCCc-ccccCCCcCcccchhhHHHHHHHHhhhc-ccCCchHHHHHHHHHhhhhcccccC
Q 002978 368 IVNASHGY--ATGGTSAGEFWSDPK-RLASTLGTENEESCTTYNMLKVSRHLFR-WTKEMVYADYYERALTNGVLSIQRG 443 (861)
Q Consensus 368 ~V~~~h~y--vTGG~g~~E~f~~p~-~l~~~l~~~~~ETCas~nmlkl~~~Lf~-~tgD~~YaD~~ERaLyN~iLa~q~~ 443 (861)
...+ +++ .||-.-- .|.... ..+...-. ..-.=..++|+.+.+.|-. .++..+|.+.+++.+ ++++.-|++
T Consensus 235 ~~~~-~l~D~~tGL~~H--g~~~~~~~~~~~~Wa-RGnGW~~~gl~~~l~~lp~~~~~r~~l~~~~~~~a-~~l~~~Q~~ 309 (445)
T 3k11_A 235 QFAD-RMFIPEKGLYRH--GWVESSTDHPAFCWA-RANGWALLTACELLDVLPEDYPQRPKVMDYFRAHV-RGVTALQSG 309 (445)
T ss_dssp HHHH-HHEETTTTEECS--EEETTCSSCCCCCBH-HHHHHHHHHHHHHHHHSCTTCTTHHHHHHHHHHHH-HHHHTTCCT
T ss_pred HHHH-hcccCCCCCEee--eecCCCCCCCcceec-ccchHHHHHHHHHHHhcccccccHHHHHHHHHHHH-HHHHHhCCC
Confidence 5443 333 1221110 000000 00000000 1122344666666665543 234566777777666 888888863
No 29
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=95.42 E-value=0.093 Score=60.65 Aligned_cols=193 Identities=17% Similarity=0.093 Sum_probs=109.8
Q ss_pred HHHHHHHHHHHc------CChhHHHHHHHHHHHHHHHhhhccccccc-----------ccccc---cccccccchHHHHH
Q 002978 238 ILAGLLDQYTFA------DNTQALKMTKWMVEYFYNRVQNVITKYSV-----------ERHWN---SLNEETGGMNDVLY 297 (861)
Q Consensus 238 I~aGLld~y~~t------G~~~aL~va~~~ad~~~~r~~~~~~~~~~-----------~~~~~---~l~~E~GGmne~L~ 297 (861)
++-|||.+|.++ |++.+|+.|+.+||.+..-|..-..+.+. ..++. ..-.|.|.+..-+.
T Consensus 104 ~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~ 183 (511)
T 1dl2_A 104 MLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFK 183 (511)
T ss_dssp HHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHH
T ss_pred hhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHH
Confidence 688999999999 99999999999999998777511122211 01111 11236677778899
Q ss_pred HHHHHcCCHHHHHHhhhcccc---------cccchhcccCCCCCCCcccCCccch-------hHHHHHHHhcCCcHHHHH
Q 002978 298 RLYTITQDPKHLLLAHLFDKP---------CFLGLLAVQADDISGFHANTHIPVV-------IGSQMRYEVTGDPLYKVT 361 (861)
Q Consensus 298 ~LY~~TGd~ryL~lA~~F~~~---------~~~~~l~~~~D~l~g~HanthiP~~-------~G~a~~Y~~TGD~~y~~a 361 (861)
+|.++|||++|.++|++..+. ...+......|.-.+.....++-+- +-..+.|.+++|+.|++.
T Consensus 184 ~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYLlK~~il~~d~~y~~m 263 (511)
T 1dl2_A 184 YLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYLLKQYLLTHETLYYDL 263 (511)
T ss_dssp HHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHHHHHHHhcCCHHHHHH
Confidence 999999999999999986321 0100000011111121112222211 225777888899999888
Q ss_pred HHHHHHHhhccceeeecCCCC----CCCCCC-CcccccCCCcCcccchhhHHHHHHHHhhhccc---------CCchHHH
Q 002978 362 GTFFMDIVNASHGYATGGTSA----GEFWSD-PKRLASTLGTENEESCTTYNMLKVSRHLFRWT---------KEMVYAD 427 (861)
Q Consensus 362 a~~fwd~V~~~h~yvTGG~g~----~E~f~~-p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~t---------gD~~YaD 427 (861)
=...++.|.+ |+.-....+. +|.-.. ...+. +....=+|=.-+|+-|.. ...+. .+.+|++
T Consensus 264 ~~~a~~~i~~-~L~~~~~~~~~~~~~~~~~~~~g~~~---~~~~hL~cF~gG~~aLg~-~~~~~~~~a~~~~~~~~~~~~ 338 (511)
T 1dl2_A 264 YRKSMEGMKK-HLLAQSKPSSLWYIGEREQGLHGQLS---PKMDHLVCFMGGLLASGS-TEGLSIHEARRRPFFSKSDWD 338 (511)
T ss_dssp HHHHHHHHHH-HTEEECTTTCCEEECBBTTCTTSCCB---CEEEGGGGGHHHHHHHHH-HTTCCHHHHTTSTTCCHHHHH
T ss_pred HHHHHHHHHH-HhccCCCCCCcEEEEEeecCCCCccc---cccchhhhchhHHHHhcc-ccCCChhhhhhcccccHHHHH
Confidence 8888887764 4432210000 111100 00111 233456899999988876 22221 1236777
Q ss_pred HHHHHHhh
Q 002978 428 YYERALTN 435 (861)
Q Consensus 428 ~~ERaLyN 435 (861)
..++...-
T Consensus 339 ~a~~l~~t 346 (511)
T 1dl2_A 339 LAKGITDT 346 (511)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77666433
No 30
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=95.33 E-value=0.08 Score=59.49 Aligned_cols=189 Identities=12% Similarity=0.017 Sum_probs=107.5
Q ss_pred hHHHHHHHHHHHhcCChhHHHH-HHHHHHHHHHHHhhc----CCCccccCCcchhhhhhc-cCCcccccchhHHHHHHHH
Q 002978 170 GHYLSASAHMWASTHNVTLKEK-MTAVVSALSECQNKM----GSGYLSAFPSEQFDRFEA-LKPVWAPYYTIHKILAGLL 243 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k-~d~~Vd~L~~~Q~~~----~dGYL~a~~~~~~~~~~~-l~~~W~pyYt~HkI~aGLl 243 (861)
.=++-|+-..+..++|+++.+. +.++++.|.+.-+.. .... ..|- .+ .|.. ..-.|+-=.++ |+..|+
T Consensus 168 AG~l~aLl~L~~~~~~~~~~~~~i~~i~~~ii~~g~~~~~~~~~~~--~~pl-~~-~w~~~~~~G~aHG~aG--I~~~Ll 241 (411)
T 3e6u_A 168 IGYIYALLFVNKNFGVEKIPQSHIQQICETILTSGENLARKRNFTA--KSPL-MY-EWYQEYYVGAAHGLAG--IYYYLM 241 (411)
T ss_dssp HHHHHHHHHHHHHHSSCCSCHHHHHHHHHHHHHHHHHHHHHTTTTT--TCSC-CC-CBTTBCBCSTTTSHHH--HHHHHT
T ss_pred HHHHHHHHHHHHHcCCccchHHHHHHHHHHHHHHHHHHHHhccccC--CCCc-ce-eecCccCCcccccHHH--HHHHHH
Confidence 3467777777888888776544 566777766653210 1000 0000 00 0110 00111111122 555566
Q ss_pred HHHHHcCChhHHHHHHHHHHHHHHHhhhccccccc---cccccccccccc--chHHHHHHHHHHcCCHHHHHHhhhcccc
Q 002978 244 DQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSV---ERHWNSLNEETG--GMNDVLYRLYTITQDPKHLLLAHLFDKP 318 (861)
Q Consensus 244 d~y~~tG~~~aL~va~~~ad~~~~r~~~~~~~~~~---~~~~~~l~~E~G--Gmne~L~~LY~~TGd~ryL~lA~~F~~~ 318 (861)
..++.+++++.++.+.+..+|+.+...+. ..++. +......+--+| |+..+|..+++.++|++|++.|...-+.
T Consensus 242 ~~~~~~~~~~~~~~i~~~l~~l~~~~~~~-g~wp~~~~~~~~~~~~wChG~~Gi~~~l~~~~~~~~~~~~~~~a~~~~~~ 320 (411)
T 3e6u_A 242 QPSLQVSQGKLHSLVKPSVDYVCQLKFPS-GNYPPCIGDNRDLLVHWCHGAPGVIYMLIQAYKVFREEKYLCDAYQCADV 320 (411)
T ss_dssp CGGGCCCHHHHHHTHHHHHHHHHHTCCTT-SCCCSBTTCCCCCCCSSSSSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred HHHhhcChHHHHHHHHHHHHHHHHhhccC-CCCCCCCCcccCccccccCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 66778899999999999999998754220 11111 000001111234 7889999999999999999999865321
Q ss_pred cccchhcccCCCCCCCcccCCccc--hhHHHHHHHhcCCcHHHHHHHHHHHHhhc
Q 002978 319 CFLGLLAVQADDISGFHANTHIPV--VIGSQMRYEVTGDPLYKVTGTFFMDIVNA 371 (861)
Q Consensus 319 ~~~~~l~~~~D~l~g~HanthiP~--~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~ 371 (861)
.+.. + .+...+..-|.-. .....+.|+.|+|+.|++.+..+.+.+.+
T Consensus 321 --~~~~--g--~~~~~~~lChG~aG~~~~ll~~~~~t~~~~~~~~A~~~~~~~~~ 369 (411)
T 3e6u_A 321 --IWQY--G--LLKKGYGLCHGSAGNAYAFLTLYNLTQDMKYLYRACKFAEWCLE 369 (411)
T ss_dssp --HHHH--C--SBTTCSCSTTSHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHTT
T ss_pred --HHhc--C--ccCCCCceecChHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 1110 0 1111122334442 23367779999999999999999998875
No 31
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=94.59 E-value=0.15 Score=59.24 Aligned_cols=191 Identities=21% Similarity=0.195 Sum_probs=106.2
Q ss_pred HhcCChhHHHHHHHHHHHHHHHH-hhcCCCccccCCcchhhhhhc-----cCCcccccchhHHHHHHHHHHHHHcC--Ch
Q 002978 181 ASTHNVTLKEKMTAVVSALSECQ-NKMGSGYLSAFPSEQFDRFEA-----LKPVWAPYYTIHKILAGLLDQYTFAD--NT 252 (861)
Q Consensus 181 a~t~D~~L~~k~d~~Vd~L~~~Q-~~~~dGYL~a~~~~~~~~~~~-----l~~~W~pyYt~HkI~aGLld~y~~tG--~~ 252 (861)
..|+|+.+.++++++.+.|.+.| . .+|-++.+-...-..|.. +...--.|| .-|+-+|.++| ++
T Consensus 249 ~LTGd~~Y~~~a~r~~~~l~~~~~~--~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~Y------EYLlK~~il~g~~d~ 320 (538)
T 1x9d_A 249 RLTGDKKFQEAVEKVTQHIHGLSGK--KDGLVPMFINTHSGLFTHLGVFTLGARADSYY------EYLLKQWIQGGKQET 320 (538)
T ss_dssp HHHCCTHHHHHHHHHHHHHHTCSCC--BTTBCCSEEETTTCCEESTTEECSSTTTHHHH------HHHHHHHHHTTSCCH
T ss_pred HHhCCcHHHHHHHHHHHHHHhcccC--CCCCcceEEeCCCCCccCCcceeecCCccHHH------HHHHHHHHHcCCchH
Confidence 47999999999999999998877 4 566555432100001110 000001344 34778999998 67
Q ss_pred hHHHHHHHHHHHHHHHhhhcc--ccc------c---cccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc-
Q 002978 253 QALKMTKWMVEYFYNRVQNVI--TKY------S---VERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCF- 320 (861)
Q Consensus 253 ~aL~va~~~ad~~~~r~~~~~--~~~------~---~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~- 320 (861)
+.+++-....+-+.+.+.... .++ . ......-+.|-.|||- +|. -..-.+++|+++|+.+.+.|+
T Consensus 321 ~y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~~~~~hL~cF~gG~~-aLg--g~~~~~~~~l~~a~~L~~tC~~ 397 (538)
T 1x9d_A 321 QLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTL-ALG--VYHGLPASHMELAQELMETCYQ 397 (538)
T ss_dssp HHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHH-HHH--HHTTCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccCcccchHhhhhhhHH-Hhc--CcccCcHHHHHHHHHHHHHHHH
Confidence 788887777777766542110 000 0 0000112456667762 222 223467889999987643221
Q ss_pred --------cchhcccCCC-----CCCC---cccCCc---c-chhHHHHHHHhcCCcHHHHHHHHHHHHhhccceeeecCC
Q 002978 321 --------LGLLAVQADD-----ISGF---HANTHI---P-VVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGT 380 (861)
Q Consensus 321 --------~~~l~~~~D~-----l~g~---Hanthi---P-~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yvTGG~ 380 (861)
+.|....-+. -... ....|= | .++..--+|++|||+.|++.+-..++.+.++=-...||.
T Consensus 398 ~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Ggy 477 (538)
T 1x9d_A 398 MNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGY 477 (538)
T ss_dssp HHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSCB
T ss_pred HHHhcccCCCceEEEeccCCCccccceeeeccCcccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCCc
Confidence 1121110000 0000 011111 3 467788899999999999999999999875333333446
Q ss_pred CC
Q 002978 381 SA 382 (861)
Q Consensus 381 g~ 382 (861)
++
T Consensus 478 a~ 479 (538)
T 1x9d_A 478 SS 479 (538)
T ss_dssp CC
T ss_pred cc
Confidence 54
No 32
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=94.57 E-value=1.2 Score=50.32 Aligned_cols=237 Identities=14% Similarity=0.123 Sum_probs=119.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccCCc------chhhhhhcc---CCccc-----ccchhHHHHHHHH-HHHHHcC
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAFPS------EQFDRFEAL---KPVWA-----PYYTIHKILAGLL-DQYTFAD 250 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~------~~~~~~~~l---~~~W~-----pyYt~HkI~aGLl-d~y~~tG 250 (861)
+.+++.++.-+|.|.+||. ++|.+-.--. ..|.+-++. +.++. |--..-...++.+ ++++.-.
T Consensus 90 ~d~ldeikwg~D~llk~~~--~~g~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~y~~~~~~pgs~~a~~~AAalA~as~vfk 167 (433)
T 1ks8_A 90 DDGRKAVKWATDYFIKAHT--SQNEFYGQVGQGDADHAFWGRPEDMTMARPAYKIDTSRPGSDLAGETAAALAAASIVFR 167 (433)
T ss_dssp HHHHHHHHHHHHHHHHHCC--BTTBEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCcCCcccCCHhhCCCCCceeeccCCCCccHHHHHHHHHHHHHHHhcc
Confidence 7888899999999999998 5554321100 011111111 11110 1111112333333 3444433
Q ss_pred C------hhHHHHHHHHHHHHHHHhhhccccccccccccc---ccccccchHHHHHHHHHHcCCHHHHHHhhhccccccc
Q 002978 251 N------TQALKMTKWMVEYFYNRVQNVITKYSVERHWNS---LNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFL 321 (861)
Q Consensus 251 ~------~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~~---l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~~ 321 (861)
+ ++.|+.|+++-+|..+.-+......+.....+. ...| +..+-+|||..|||++||+.|+.+... +
T Consensus 168 ~~D~~yA~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~~~~~~~~-~- 242 (433)
T 1ks8_A 168 NVDGTYSNNLLTHARQLFDFANNYRGKYSDSITDARNFYASADYRDE---LVWAAAWLYRATNDNTYLNTAESLYDE-F- 242 (433)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHSCCCHHHHSGGGGGTSCCCCTHHH---HHHHHHHHHHHHCCHHHHHHHHHHHHH-T-
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHCCCcccCCCCcCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-c-
Confidence 2 478888888888887532111000000000000 1122 346778999999999999998865321 1
Q ss_pred chhcccCCCCCCCcccCCccchhHH-HHHHHhcCCcHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCcCc
Q 002978 322 GLLAVQADDISGFHANTHIPVVIGS-QMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTEN 400 (861)
Q Consensus 322 ~~l~~~~D~l~g~HanthiP~~~G~-a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yvTGG~g~~E~f~~p~~l~~~l~~~~ 400 (861)
...... ..+.= -.+..|. ..+.++++++.|++.++.+.+.+.....+--||..-...|
T Consensus 243 ---~~~~~~--~~~~W--d~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W-------------- 301 (433)
T 1ks8_A 243 ---GLQNWG--GGLNW--DSKVSGVQVLLAKLTNKQAYKDTVQSYVNYLINNQQKTPKGLLYIDMW-------------- 301 (433)
T ss_dssp ---TGGGSC--CCCCS--SCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCST--------------
T ss_pred ---CcCcCc--CCcCc--cchhhHHHHHHhhccChHHHHHHHHHHHHHHHhcCCcCCCCceeecCC--------------
Confidence 000000 00100 0122343 3345778999999999998888763221111222111111
Q ss_pred ccchhhHHHHHHHHhhhcc-cCCchHHHHHHHHHhhhhcccccCCCCCeEEEeccCCC
Q 002978 401 EESCTTYNMLKVSRHLFRW-TKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLGR 457 (861)
Q Consensus 401 ~ETCas~nmlkl~~~Lf~~-tgD~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~~ 457 (861)
...=-+.|+.+++-....+ +++.+|.+...+.+ |=|||. ++ ..|+.-.+.
T Consensus 302 Gs~~~~~n~a~l~~~~~~~~~~~~~y~~~A~~ql-dYiLG~-n~-----~SyvvG~G~ 352 (433)
T 1ks8_A 302 GTLRHAANAAFIMLEAAELGLSASSYRQFAQTQI-DYALGD-GG-----RSFVCGFGS 352 (433)
T ss_dssp THHHHHHHHHHHHHHHHHTTSSHHHHHHHHHHHH-HHHHTT-TS-----SCCBTTSSS
T ss_pred chhHHHHHHHHHHHHHHhcCCCHHHHHHHHHHhH-hhccCC-CC-----cceEeccCC
Confidence 1111122333444444455 78899999988765 889997 22 256655543
No 33
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=94.32 E-value=0.065 Score=61.44 Aligned_cols=193 Identities=18% Similarity=0.179 Sum_probs=107.7
Q ss_pred HHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhc----cCCcccccchhHHHHHHHHHHHHHcC--Chh
Q 002978 180 WASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEA----LKPVWAPYYTIHKILAGLLDQYTFAD--NTQ 253 (861)
Q Consensus 180 ~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~----l~~~W~pyYt~HkI~aGLld~y~~tG--~~~ 253 (861)
-..|+|+++.++++++.+.|.+.|. .+|-+..+-...-..|.. +...=-.|| .-|+-+|.++| +++
T Consensus 186 S~lTGd~~Y~~~a~~~~~~l~~~~~--~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~d~~ 257 (478)
T 1nxc_A 186 SHLSGDPVFAEKVMKIRTVLNKLDK--PEGLYPNYLNPSSGQWGQHHVSVGGLGDSFY------EYLLKAWLMSDKTDLE 257 (478)
T ss_dssp HHHHCCTHHHHHHHHHHHHHHHSCC--GGGCCCSEECTTTCCBCSCEECSSTTTHHHH------HHHHHHHHHTTTCCHH
T ss_pred HHHHCChHHHHHHHHHHHHHHhcCC--CCCccccccCCCCCCccCceeeecCCCchHH------HHHHHHHHHcCCchHH
Confidence 3479999999999999999888776 566655432100011111 000001344 34778899988 467
Q ss_pred HHHHHHHHHHHHHHHhhhcc-ccc------cccc---ccccccccccchHHHHH-HHHHHcCCHHHHHHhhhcccccc--
Q 002978 254 ALKMTKWMVEYFYNRVQNVI-TKY------SVER---HWNSLNEETGGMNDVLY-RLYTITQDPKHLLLAHLFDKPCF-- 320 (861)
Q Consensus 254 aL~va~~~ad~~~~r~~~~~-~~~------~~~~---~~~~l~~E~GGmne~L~-~LY~~TGd~ryL~lA~~F~~~~~-- 320 (861)
.+++-....+-+.+.+.... .++ .... ...-+.|-.|||- +|. ++......++|+++|+.+.+.|+
T Consensus 258 ~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~-aLg~~~~~~~~~~~~l~~a~~l~~tC~~~ 336 (478)
T 1nxc_A 258 AKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMF-ALGADGAPEARAQHYLELGAEIARTCHES 336 (478)
T ss_dssp HHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHH-HHTSTTSCTTCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHH-HhccccccccchHHHHHHHHHHHHHHHHH
Confidence 88888888887776652100 010 0000 0112446667763 221 22222234789999987643321
Q ss_pred -------cchhcccCCCC---CCCc-ccCC---cc-chhHHHHHHHhcCCcHHHHHHHHHHHHhhccceeeecCCCC
Q 002978 321 -------LGLLAVQADDI---SGFH-ANTH---IP-VVIGSQMRYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSA 382 (861)
Q Consensus 321 -------~~~l~~~~D~l---~g~H-anth---iP-~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h~yvTGG~g~ 382 (861)
+.|....-+.- .... ...| =| .++..--+|++|||+.|++.+...++.+.+ +.-+-+|.++
T Consensus 337 y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k-~~r~~~G~a~ 412 (478)
T 1nxc_A 337 YNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALES-HCRVNGGYSG 412 (478)
T ss_dssp HHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-HTEETTEECC
T ss_pred HHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-Hhhccccccc
Confidence 11211100000 0000 0111 13 367788889999999999999999999874 6666666664
No 34
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=93.97 E-value=0.26 Score=56.47 Aligned_cols=192 Identities=16% Similarity=0.109 Sum_probs=107.0
Q ss_pred HhcCChhHHHHHHHHHHHHHHHH--hh-cCCCccccCCcchhhhhhccCCcc----cccchhHHHHHHHHHHHHHcCCh-
Q 002978 181 ASTHNVTLKEKMTAVVSALSECQ--NK-MGSGYLSAFPSEQFDRFEALKPVW----APYYTIHKILAGLLDQYTFADNT- 252 (861)
Q Consensus 181 a~t~D~~L~~k~d~~Vd~L~~~Q--~~-~~dGYL~a~~~~~~~~~~~l~~~W----~pyYt~HkI~aGLld~y~~tG~~- 252 (861)
..|+|+++.++++++.+.|.+.| .. ..+|-++.+-...-..|....-.+ -.|| .-|+-+|.++|+.
T Consensus 176 ~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~~ 249 (475)
T 2ri9_A 176 DLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFY------EYLIKMYVYDPKRF 249 (475)
T ss_dssp HHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHH------HHHHHHHHHCTTTT
T ss_pred HHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHH------HHHHHHHHHcCCch
Confidence 47999999999999999998877 10 134554443110001111101011 1344 3478899999876
Q ss_pred -hHHHHHHHHHHHHHHHhhhcc---cccc------c---ccccccccccccchHHHHHHHHHHcCCHHHHHHhhhccccc
Q 002978 253 -QALKMTKWMVEYFYNRVQNVI---TKYS------V---ERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPC 319 (861)
Q Consensus 253 -~aL~va~~~ad~~~~r~~~~~---~~~~------~---~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~ 319 (861)
+.+++-....+-+.+.+.... +++. . .....-+.|-.|||- +|. -.+-++++|+++|+.+.+.|
T Consensus 250 ~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~l~~tC 326 (475)
T 2ri9_A 250 ETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSF-LLG--GTVLDRQDFIDFGLELVDGC 326 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHH-Hhc--ccccccHHHHHHHHHHHHHH
Confidence 677777776666665543211 0100 0 000113456677763 332 12346889999998764432
Q ss_pred c---------cchhcccCC---CC---------CCCcc-cCC---cc-chhHHHHHHHhcCCcHHHHHHHHHHHHhhccc
Q 002978 320 F---------LGLLAVQAD---DI---------SGFHA-NTH---IP-VVIGSQMRYEVTGDPLYKVTGTFFMDIVNASH 373 (861)
Q Consensus 320 ~---------~~~l~~~~D---~l---------~g~Ha-nth---iP-~~~G~a~~Y~~TGD~~y~~aa~~fwd~V~~~h 373 (861)
+ +.|....-+ .. .++.. ..| =| .++..--+|++|||+.|++.+...++.+.+ +
T Consensus 327 ~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~k-~ 405 (475)
T 2ri9_A 327 EATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINS-T 405 (475)
T ss_dssp HHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH-H
T ss_pred HHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHH-H
Confidence 2 112111000 00 01110 111 23 467788889999999999999999999874 5
Q ss_pred eeeecCCCC
Q 002978 374 GYATGGTSA 382 (861)
Q Consensus 374 ~yvTGG~g~ 382 (861)
.-+-.|.++
T Consensus 406 ~rt~~G~a~ 414 (475)
T 2ri9_A 406 CRTDSGFAA 414 (475)
T ss_dssp TBCSSSBCC
T ss_pred HccccCCcc
Confidence 555566654
No 35
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=93.51 E-value=0.58 Score=54.32 Aligned_cols=186 Identities=13% Similarity=0.090 Sum_probs=107.1
Q ss_pred HHHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhhccccccccc-----------ccc--cccccccchHHHHHHHHHHcC
Q 002978 238 ILAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVER-----------HWN--SLNEETGGMNDVLYRLYTITQ 304 (861)
Q Consensus 238 I~aGLld~y~~tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~-----------~~~--~l~~E~GGmne~L~~LY~~TG 304 (861)
++-|||.+|.++|++.+|+.|..+||.+..-|.. ..+.+..+ .|. ..-.|.|.+..-+.+|.++||
T Consensus 174 ~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~LS~LTG 252 (538)
T 1x9d_A 174 ILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRT-PSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFRELSRLTG 252 (538)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCS-TTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHHHHHHC
T ss_pred hhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcC-CCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHHHHHhC
Confidence 6889999999999999999999999999866632 11111100 011 112356667788999999999
Q ss_pred CHHHHHHhhhcccccccchhcccCCCC--------CCCcccC-Cccch-------hHHHHHHHhcC--CcHHHHHHHHHH
Q 002978 305 DPKHLLLAHLFDKPCFLGLLAVQADDI--------SGFHANT-HIPVV-------IGSQMRYEVTG--DPLYKVTGTFFM 366 (861)
Q Consensus 305 d~ryL~lA~~F~~~~~~~~l~~~~D~l--------~g~Hant-hiP~~-------~G~a~~Y~~TG--D~~y~~aa~~fw 366 (861)
|++|.+.|++..+. ++......+.| .|...+. ++-+- +-..+.|.++| |+.|++.=....
T Consensus 253 d~~Y~~~a~r~~~~--l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~~d~~y~~my~~a~ 330 (538)
T 1x9d_A 253 DKKFQEAVEKVTQH--IHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGKQETQLLEDYVEAI 330 (538)
T ss_dssp CTHHHHHHHHHHHH--HHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTSCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHH--HHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCCchHHHHHHHHHHH
Confidence 99999999875321 11000001111 1111111 22111 22577788998 788888777777
Q ss_pred HHhhccceeeecCCCCCCCCCCCcccccCC-CcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHH
Q 002978 367 DIVNASHGYATGGTSAGEFWSDPKRLASTL-GTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERA 432 (861)
Q Consensus 367 d~V~~~h~yvTGG~g~~E~f~~p~~l~~~l-~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERa 432 (861)
+.|.+ |++-....+ +=.|..... .+.+ +....=+|=.-+|+-|...++. +.+|++..++.
T Consensus 331 ~~i~~-~L~~~~~~~-~~~~v~~~~-~g~~~~~~~hL~cF~gG~~aLgg~~~~---~~~~l~~a~~L 391 (538)
T 1x9d_A 331 EGVRT-HLLRHSEPS-KLTFVGELA-HGRFSAKMDHLVCFLPGTLALGVYHGL---PASHMELAQEL 391 (538)
T ss_dssp HHHHH-HTEEECTTT-CCEEECEEE-TTEEECEEEGGGGHHHHHHHHHHHTTC---CHHHHHHHHHH
T ss_pred HHHHH-HhccCCCCC-CceEEEecc-CCccCcccchHhhhhhhHHHhcCcccC---cHHHHHHHHHH
Confidence 77764 443221000 000100000 0000 2345568999999999987753 44566665544
No 36
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=92.83 E-value=4.7 Score=45.64 Aligned_cols=238 Identities=14% Similarity=0.096 Sum_probs=117.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccC-Cc-----chhhhhhcc---CCc-cc-----ccchhH-HHHHHHHHHHHHc
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAF-PS-----EQFDRFEAL---KPV-WA-----PYYTIH-KILAGLLDQYTFA 249 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~-~~-----~~~~~~~~l---~~~-W~-----pyYt~H-kI~aGLld~y~~t 249 (861)
+.+++.++.-.|.|.+|+. .+|.+-.- .. ..|.+-|.. +.. |. |--..- ..-|.|-.+++.-
T Consensus 92 ~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~w~~Pe~~~~~R~~~y~~~~~~p~sd~a~~~AAalAaas~vf 169 (441)
T 1ia6_A 92 TKMLQQLKYFTDYFLKSHP--NSTTFYYQVGEGNADHTYWGAPEEQTGQRPSLYKADPSSPASDILSETSAALTLMYLNY 169 (441)
T ss_dssp HHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHTTCCSCGGGCCSCCCCCEEEBTTBCCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCChhhCCCCCceeeEeCCCCCccHHHHHHHHHHHHHHHhc
Confidence 6788889999999999965 33322111 00 011111111 111 10 111111 2233333444443
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhcccccccccccc---cccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc
Q 002978 250 DN------TQALKMTKWMVEYFYNRVQNVITKYSVERHWN---SLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCF 320 (861)
Q Consensus 250 G~------~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~---~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~ 320 (861)
.+ ++.|+.|+++-+|..+.-. .......+ -...| +..+-+|||..|||++||+.|+.+....
T Consensus 170 k~~D~~yA~~~L~~A~~~~~fa~~~~g-----~~~~~~~Y~ss~~~DE---~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~- 240 (441)
T 1ia6_A 170 KNIDSAYATKCLNAAKELYAMGKANQG-----VGNGQSFYQATSFGDD---LAWAATWLYTATNDSTYITDAEQFITLG- 240 (441)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHSCS-----CCCCTTTSCCCCSHHH---HHHHHHHHHHHHCCTHHHHHHHHHTTC--
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCC-----CCCCCCCCCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHhhh-
Confidence 32 5788888888888865311 11111000 01123 4467789999999999999998753221
Q ss_pred cchhcccCCCCCCCcccCCccchhHHHH-HHHhcCCcHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCcC
Q 002978 321 LGLLAVQADDISGFHANTHIPVVIGSQM-RYEVTGDPLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTE 399 (861)
Q Consensus 321 ~~~l~~~~D~l~g~HanthiP~~~G~a~-~Y~~TGD~~y~~aa~~fwd~V~~~h~yvTGG~g~~E~f~~p~~l~~~l~~~ 399 (861)
.............|.= -.+..|... +.++++++.|++.++.+.+.....-.+--||..-.-.|
T Consensus 241 -~~~~~~~~~~~~~~~W--d~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~W------------- 304 (441)
T 1ia6_A 241 -NTMNENKMQDKWTMCW--DDMYVPAALRLAQITGKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNW------------- 304 (441)
T ss_dssp ------CGGGCSSCSSS--SCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCST-------------
T ss_pred -hhcccccccCCCcCCc--cchHHHHHHHHHhccCcHHHHHHHHHHHHHHHhhcccCCCCceecCCc-------------
Confidence 0000000000000100 012345443 46778999999988887765542111222443311111
Q ss_pred cccchhhHHHHHHHHhhhcccCCchHHHHHHHHHhhhhcccccCCCCCeEEEeccCC
Q 002978 400 NEESCTTYNMLKVSRHLFRWTKEMVYADYYERALTNGVLSIQRGTEPGVMIYMLPLG 456 (861)
Q Consensus 400 ~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERaLyN~iLa~q~~~d~g~~~Y~~PL~ 456 (861)
...=-+.|+.+++..-..++++.+|.+...+.+ |=|||. +|. .+.|+.-.+
T Consensus 305 -Gs~~~~~~~a~l~~~~~~~~~~~~y~~~A~~ql-dYiLG~-NP~---~~SyvvG~G 355 (441)
T 1ia6_A 305 -GVLRYAAAESMVMLVYCKQNPDQSLLDLAKKQV-DYILGD-NPA---NMSYIIGYG 355 (441)
T ss_dssp -THHHHHHHHHHHHHHHHHHSCCHHHHHHHHHHH-HHHHTC-STT---CCCSBTTSS
T ss_pred -chHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHH-HHhcCC-CCC---CceeEEecC
Confidence 111111244444444455678899999998765 888885 342 245655444
No 37
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=92.58 E-value=0.78 Score=52.90 Aligned_cols=187 Identities=14% Similarity=0.028 Sum_probs=104.9
Q ss_pred HHHHHHHHHHHcCCh------------hHHHHHHHHHHHHHHHhhhcccccccc--------cccc---cccccccchHH
Q 002978 238 ILAGLLDQYTFADNT------------QALKMTKWMVEYFYNRVQNVITKYSVE--------RHWN---SLNEETGGMND 294 (861)
Q Consensus 238 I~aGLld~y~~tG~~------------~aL~va~~~ad~~~~r~~~~~~~~~~~--------~~~~---~l~~E~GGmne 294 (861)
++-|||.+|.++|++ ..|+.|+.+||.+..-|.. ..+.+.. ..+. ..-.|.|.+..
T Consensus 105 ~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdT-ptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~L 183 (503)
T 1hcu_A 105 YLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTT-PSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVL 183 (503)
T ss_dssp HHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEEECSSSCEECCCSEEEHHHHTTSHH
T ss_pred hHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCcceeecccCCCCCCCCccccccccceee
Confidence 688999999999984 8999999999998866642 1111110 1111 11236677778
Q ss_pred HHHHHHHHcCCHHHHHHhhhcccccccchhc---ccCCCCCCCcc--------cCCccch-------hHHHHHHHhcCCc
Q 002978 295 VLYRLYTITQDPKHLLLAHLFDKPCFLGLLA---VQADDISGFHA--------NTHIPVV-------IGSQMRYEVTGDP 356 (861)
Q Consensus 295 ~L~~LY~~TGd~ryL~lA~~F~~~~~~~~l~---~~~D~l~g~Ha--------nthiP~~-------~G~a~~Y~~TGD~ 356 (861)
-+.+|-++|||++|.+.|++..+. ++... ...+.|-+.+- ..++-+- +-..+.|.++|+.
T Consensus 184 EF~~LS~lTGd~~Y~~~a~~~~~~--l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~ 261 (503)
T 1hcu_A 184 EWTRLSDLTGNPQYAQLAQKGESY--LLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFYEYLIKMYLYDPVA 261 (503)
T ss_dssp HHHHHHHHHSCTHHHHHHHHHHHH--HHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHHHHHHHHHHHCTTT
T ss_pred ehHHHHHHhCChHHHHHHHHHHHH--HHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHHHHHHHHHHHcCCc
Confidence 899999999999999999886321 00000 00111111111 1111111 2257778999875
Q ss_pred --HHHHHHHHHHHHhhccceeeecCCCCCCCCCCCccccc-C-CCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHH
Q 002978 357 --LYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLAS-T-LGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERA 432 (861)
Q Consensus 357 --~y~~aa~~fwd~V~~~h~yvTGG~g~~E~f~~p~~l~~-~-l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERa 432 (861)
.|++.=....+.|.+ |+.-.-....+=.|.. +..+ . .+....=+|=.-+|+-|.-.++. ..+|++..++.
T Consensus 262 ~~~y~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~--~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~L 335 (503)
T 1hcu_A 262 FAHYKDRWVLGADSTIG-HLGSHPSTRKDLTFLS--SYNGQSTSPNSGHLASFGGGNFILGGILLN---EQKYIDFGIKL 335 (503)
T ss_dssp THHHHHHHHHHHHHHHH-HTEECBTTCTTCCEEC--EEETTEEESEEEGGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEE--eccCCccccccchhhhhhhHHHHhcCcccc---cHHHHHHHHHH
Confidence 676666666666653 3332110000000100 0000 0 12344568999999999987664 45677776654
Q ss_pred H
Q 002978 433 L 433 (861)
Q Consensus 433 L 433 (861)
.
T Consensus 336 ~ 336 (503)
T 1hcu_A 336 A 336 (503)
T ss_dssp H
T ss_pred H
Confidence 4
No 38
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=92.50 E-value=1.1 Score=51.45 Aligned_cols=187 Identities=12% Similarity=0.043 Sum_probs=104.7
Q ss_pred HHHHHHHHHHHc-CC-----------hhHHHHHHHHHHHHHHHhhhccccccccc-------ccc---cccccccchHHH
Q 002978 238 ILAGLLDQYTFA-DN-----------TQALKMTKWMVEYFYNRVQNVITKYSVER-------HWN---SLNEETGGMNDV 295 (861)
Q Consensus 238 I~aGLld~y~~t-G~-----------~~aL~va~~~ad~~~~r~~~~~~~~~~~~-------~~~---~l~~E~GGmne~ 295 (861)
++-|||.+|.++ |+ +..|+.|+.+||.+..-|.. ..+.+..+ .+. ..-.|.|.+..-
T Consensus 92 ~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~T-ptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LE 170 (475)
T 2ri9_A 92 YLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDT-PSGVPYNNINITSHGNDGATTNGLAVTGTLVLE 170 (475)
T ss_dssp HHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCS-SSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHH
T ss_pred hHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcC-CCCCCCceeecccCCCcCCCccchhccccceee
Confidence 688999999999 87 68999999999998866642 11221110 010 111356667778
Q ss_pred HHHHHHHcCCHHHHHHhhhcccccccchhc----ccCCCCCCCc--------ccCCccch-------hHHHHHHHhcCCc
Q 002978 296 LYRLYTITQDPKHLLLAHLFDKPCFLGLLA----VQADDISGFH--------ANTHIPVV-------IGSQMRYEVTGDP 356 (861)
Q Consensus 296 L~~LY~~TGd~ryL~lA~~F~~~~~~~~l~----~~~D~l~g~H--------anthiP~~-------~G~a~~Y~~TGD~ 356 (861)
+.+|-++|||++|.+.|++..+. ++... ...+.|-+.+ ...++-+- +=..+.|.++|+.
T Consensus 171 F~~LS~lTGd~~Y~~~a~~~~~~--l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~ 248 (475)
T 2ri9_A 171 WTRLSDLTGDEEYAKLSQKAESY--LLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSFYEYLIKMYVYDPKR 248 (475)
T ss_dssp HHHHHHHHSCTHHHHHHHHHHHH--HHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHhCCHHHHHHHHHHHHH--HHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchHHHHHHHHHHHcCCc
Confidence 89999999999999999886321 00000 0011111111 11122111 2257778999875
Q ss_pred --HHHHHHHHHHHHhhccceeeecCCCCCCCCCCCccccc-C-CCcCcccchhhHHHHHHHHhhhcccCCchHHHHHHHH
Q 002978 357 --LYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLAS-T-LGTENEESCTTYNMLKVSRHLFRWTKEMVYADYYERA 432 (861)
Q Consensus 357 --~y~~aa~~fwd~V~~~h~yvTGG~g~~E~f~~p~~l~~-~-l~~~~~ETCas~nmlkl~~~Lf~~tgD~~YaD~~ERa 432 (861)
.|++.=....+.|.+ |+.-.-....+=.|.. +..+ . .+....=+|=.-+|+-|.-.++. ..+|++..++.
T Consensus 249 ~~~~~~m~~~a~~~i~~-~l~~~~~~~~~~~~v~--~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~---~~~~~~~a~~l 322 (475)
T 2ri9_A 249 FETYKDRWVLAAESTIK-HLKSHPKSRPDLTFLS--SYSNRNYDLSSQHLTCFDGGSFLLGGTVLD---RQDFIDFGLEL 322 (475)
T ss_dssp THHHHHHHHHHHHHHHH-HTEECCSSCTTCCEEC--EEETTEEECEEETGGGGHHHHHHHHHHHHT---CHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHH-HhccCCCCCCCceEEE--eccCCccccccchHHHhHHHHHHhcccccc---cHHHHHHHHHH
Confidence 677666666666653 3332110000000100 0000 0 12334568999999999987764 45677776655
Q ss_pred H
Q 002978 433 L 433 (861)
Q Consensus 433 L 433 (861)
.
T Consensus 323 ~ 323 (475)
T 2ri9_A 323 V 323 (475)
T ss_dssp H
T ss_pred H
Confidence 4
No 39
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=92.27 E-value=0.44 Score=54.96 Aligned_cols=192 Identities=15% Similarity=0.110 Sum_probs=107.0
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHh--hcCCCccccCCcchhhhhhc----cCCcccccchhHHHHHHHHHHHHHcCCh--
Q 002978 181 ASTHNVTLKEKMTAVVSALSECQN--KMGSGYLSAFPSEQFDRFEA----LKPVWAPYYTIHKILAGLLDQYTFADNT-- 252 (861)
Q Consensus 181 a~t~D~~L~~k~d~~Vd~L~~~Q~--~~~dGYL~a~~~~~~~~~~~----l~~~W~pyYt~HkI~aGLld~y~~tG~~-- 252 (861)
..|+|+++.++++++.+.|.+.|. ...+|-++.+-...-..|.. +...=-.|| .-|+-+|.++|+.
T Consensus 190 ~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y------EYLlK~~il~g~~~~ 263 (503)
T 1hcu_A 190 DLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFY------EYLIKMYLYDPVAFA 263 (503)
T ss_dssp HHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHH------HHHHHHHHHCTTTTH
T ss_pred HHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHH------HHHHHHHHHcCCchH
Confidence 479999999999999999988663 11355544431100001110 000001344 3478899999876
Q ss_pred hHHHHHHHHHHHHHHHhhhcc---cccc------c---ccccccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc
Q 002978 253 QALKMTKWMVEYFYNRVQNVI---TKYS------V---ERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCF 320 (861)
Q Consensus 253 ~aL~va~~~ad~~~~r~~~~~---~~~~------~---~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~ 320 (861)
+.+++-....+-+.+.+.... +++. . .....-+.|-.|||- +|. -.+-++++|+++|+.+.+.|+
T Consensus 264 ~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~-aLg--g~~~~~~~~~~~a~~L~~tC~ 340 (503)
T 1hcu_A 264 HYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNF-ILG--GILLNEQKYIDFGIKLASSYF 340 (503)
T ss_dssp HHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHH-HHH--HHHHTCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHH-Hhc--CcccccHHHHHHHHHHHHHHH
Confidence 677777777676665543211 0100 0 000113456677763 332 124468899999987644322
Q ss_pred ---------cchhcccC---C------CC---------CCCcc-cCC---cc-chhHHHHHHHhcCCcHHHHHHHHHHHH
Q 002978 321 ---------LGLLAVQA---D------DI---------SGFHA-NTH---IP-VVIGSQMRYEVTGDPLYKVTGTFFMDI 368 (861)
Q Consensus 321 ---------~~~l~~~~---D------~l---------~g~Ha-nth---iP-~~~G~a~~Y~~TGD~~y~~aa~~fwd~ 368 (861)
+.|....- + .. .++.. ..| =| .++..--+|++|||+.|++.+...++.
T Consensus 341 ~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~a 420 (503)
T 1hcu_A 341 GTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALSA 420 (503)
T ss_dssp HHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHHH
T ss_pred HHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 11211000 0 00 01100 011 13 457788889999999999999999999
Q ss_pred hhccceeeecCCCC
Q 002978 369 VNASHGYATGGTSA 382 (861)
Q Consensus 369 V~~~h~yvTGG~g~ 382 (861)
+. ++.-+-.|.++
T Consensus 421 i~-k~~r~~~Gya~ 433 (503)
T 1hcu_A 421 IE-DACRAGSAYSS 433 (503)
T ss_dssp HH-HHHEETTEECC
T ss_pred HH-HHHhhccCCcc
Confidence 87 46656666654
No 40
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=92.14 E-value=0.34 Score=54.35 Aligned_cols=127 Identities=17% Similarity=0.116 Sum_probs=80.5
Q ss_pred HHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHHcCChhH
Q 002978 175 ASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQA 254 (861)
Q Consensus 175 AlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~tG~~~a 254 (861)
++..++..++|+++++.+...++.+.+.|. ++|. +|...-+. .+..-.|.-=-.+ |...++.+++.+++++.
T Consensus 239 ~Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~--~~g~---wp~~~~~~-~~~~~~wChG~~G--i~~~l~~~~~~~~~~~~ 310 (411)
T 3e6u_A 239 YLMQPSLQVSQGKLHSLVKPSVDYVCQLKF--PSGN---YPPCIGDN-RDLLVHWCHGAPG--VIYMLIQAYKVFREEKY 310 (411)
T ss_dssp HHTCGGGCCCHHHHHHTHHHHHHHHHHTCC--TTSC---CCSBTTCC-CCCCCSSSSSHHH--HHHHHHHHHHHHCCHHH
T ss_pred HHHHHHhhcChHHHHHHHHHHHHHHHHhhc--cCCC---CCCCCCcc-cCccccccCCcHH--HHHHHHHHHHHcCCHHH
Confidence 333344568899999999999999999887 6664 33211000 0001122211122 44456788899999999
Q ss_pred HHHHHHHHHHHHHHhhhcccccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhccc
Q 002978 255 LKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDK 317 (861)
Q Consensus 255 L~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~ 317 (861)
++.+.+.++.+.++ . ....... .-|.- .|.-+.|.++|+.|||++|++.|..|-+
T Consensus 311 ~~~a~~~~~~~~~~--g----~~~~~~~-lChG~-aG~~~~ll~~~~~t~~~~~~~~A~~~~~ 365 (411)
T 3e6u_A 311 LCDAYQCADVIWQY--G----LLKKGYG-LCHGS-AGNAYAFLTLYNLTQDMKYLYRACKFAE 365 (411)
T ss_dssp HHHHHHHHHHHHHH--C----SBTTCSC-STTSH-HHHHHHHHHHHHHHCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhc--C----ccCCCCc-eecCh-HHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 99999988877643 1 1000111 11222 2577899999999999999999988754
No 41
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=91.56 E-value=4.7 Score=47.52 Aligned_cols=175 Identities=14% Similarity=0.073 Sum_probs=87.9
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccCCc------chhhhhhc---cCCccc-----ccchh-HHHHHHHHHHHHHcC
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAFPS------EQFDRFEA---LKPVWA-----PYYTI-HKILAGLLDQYTFAD 250 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~------~~~~~~~~---l~~~W~-----pyYt~-HkI~aGLld~y~~tG 250 (861)
+.+++.++.-.|.|.+||. .+|.+-.--- ..|.+-|. .+..+. |--.. -..-|+|-++++.-.
T Consensus 91 ~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~m~~~r~~y~~~~~~pgsd~a~~~AAAlAaAS~vfk 168 (605)
T 1tf4_A 91 PYLKDNLRWVNDYFIKAHP--SPNVLYVQVGDGDADHKWWGPAEVMPMERPSFKVDPSCPGSDVAAETAAAMAASSIVFA 168 (605)
T ss_dssp HHHHHHHHHHHHHHHHTCS--BTTBEEEEESCHHHHHHCCSCGGGCCSCCCEEEEBTTBCCHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHhcc--CCCeEEEEeCCCCcCccccCChhhCCCCCceeEecCCCCcchHHHHHHHHHHHHHhhcc
Confidence 6788889999999999996 4332211100 01112111 112111 10111 123333334444433
Q ss_pred C------hhHHHHHHHHHHHHHHHhhhccccccccccc---ccccccccchHHHHHHHHHHcCCHHHHHHhhhccccccc
Q 002978 251 N------TQALKMTKWMVEYFYNRVQNVITKYSVERHW---NSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFL 321 (861)
Q Consensus 251 ~------~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~---~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~~ 321 (861)
+ ++.|+.|+++-+|..+.-+......+..... .-...| +..+-+|||..|||++||+.|+.+... +-
T Consensus 169 ~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~-~~ 244 (605)
T 1tf4_A 169 DDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPAGAFYNSWSGYQDE---LVWGAYWLYKATGDDSYLAKAEYEYDF-LS 244 (605)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTTHHHHCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHGGG-SC
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCccccccCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-cc
Confidence 2 4788888888888875321110000000000 001123 456778999999999999999875321 10
Q ss_pred chhcccCC--CCCCCcccCCccchhHHHH-HHHhcCCcHHHHHHHHHHHHhh
Q 002978 322 GLLAVQAD--DISGFHANTHIPVVIGSQM-RYEVTGDPLYKVTGTFFMDIVN 370 (861)
Q Consensus 322 ~~l~~~~D--~l~g~HanthiP~~~G~a~-~Y~~TGD~~y~~aa~~fwd~V~ 370 (861)
. ....+ .....|.= -.+..|... +.++++++.|++.++.+.+...
T Consensus 245 ~--~~~~~~~~~~~~~~W--d~~~~g~~~lla~~~~~~~y~~~a~~~~~~~~ 292 (605)
T 1tf4_A 245 T--EQQTDLRSYRWTIAW--DDKSYGTYVLLAKETGKQKYIDDANRWLDYWT 292 (605)
T ss_dssp B--CTTSSCBCCSSCCSS--SCCHHHHHHHHHHHHCCHHHHHHHHHHHHHTT
T ss_pred c--ccccccccccccccc--cchHHHHHHHHHhccChHHHHHHHHHHHHHHh
Confidence 0 00000 00001100 012345444 3678999999999999888654
No 42
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=91.36 E-value=3.4 Score=45.61 Aligned_cols=182 Identities=8% Similarity=-0.102 Sum_probs=95.7
Q ss_pred HHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCC---CccccCCcc---h-hhhhhc--cCCcccccchhHHHHHHHHH
Q 002978 174 SASAHMWASTHNVTLKEKMTAVVSALSECQNKMGS---GYLSAFPSE---Q-FDRFEA--LKPVWAPYYTIHKILAGLLD 244 (861)
Q Consensus 174 sAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~d---GYL~a~~~~---~-~~~~~~--l~~~W~pyYt~HkI~aGLld 244 (861)
+++.+++....|+...+.+..+++.|.+.++ .+. ||....... . -..+.. ..-.++-=.++ |+.-|..
T Consensus 141 aGi~~~Ll~l~~~~~~~~~~~~~~~l~~~~~-~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~G~aHG~aG--i~~~L~~ 217 (409)
T 2g0d_A 141 SGILSYLLLINDEQYDDLKILIINFLSNLTK-ENNGLISLYIKSENQMSQSESEMYPLGCLNMGLAHGLAG--VGCILAY 217 (409)
T ss_dssp HHHHHHHTTCCCGGGHHHHHHHHHHHHHTTS-CCSSSCTTCBCGGGSSSHHHHHHCTTCBEECCTTTSHHH--HHHHHHH
T ss_pred HHHHHHHHHccCchhHHHHHHHHHHHHHHHh-cCCCCCceeecCCccccchhhhcCCCCCccCCchhhHHH--HHHHHHH
Confidence 3455555455578888888889998887654 222 222211000 0 000110 00011100112 4433333
Q ss_pred HHHHcC--ChhHHHHHHHHHHHHHHHhhhcccc--ccc--------------cccccccccccc--chHHHHHHHHHHcC
Q 002978 245 QYTFAD--NTQALKMTKWMVEYFYNRVQNVITK--YSV--------------ERHWNSLNEETG--GMNDVLYRLYTITQ 304 (861)
Q Consensus 245 ~y~~tG--~~~aL~va~~~ad~~~~r~~~~~~~--~~~--------------~~~~~~l~~E~G--Gmne~L~~LY~~TG 304 (861)
+| .+| +++.++.+.+.++|+.+.......+ ++. +......+--+| |+-.++..+|+.++
T Consensus 218 ~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~Gi~~~l~~~~~~~~ 296 (409)
T 2g0d_A 218 AH-IKGYSNEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWCYGGPGISLLYLYGGLALD 296 (409)
T ss_dssp HH-HHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSSSSHHHHHHHHHHHHHHTT
T ss_pred HH-HhCCCChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCCCCCHHHHHHHHHHHHHcC
Confidence 34 455 7899999999999996542210000 100 000000111234 78899999999999
Q ss_pred CHHHHHHhhhcccccccchhcccCCCCCCCcccCCccch--hHHHHHHHhcCCcHHHHHHHHH
Q 002978 305 DPKHLLLAHLFDKPCFLGLLAVQADDISGFHANTHIPVV--IGSQMRYEVTGDPLYKVTGTFF 365 (861)
Q Consensus 305 d~ryL~lA~~F~~~~~~~~l~~~~D~l~g~HanthiP~~--~G~a~~Y~~TGD~~y~~aa~~f 365 (861)
|++|++.|+...+..+-. ......+..-|...- .-....|+.|+|+.|++.+..|
T Consensus 297 d~~~~~~a~~~~~~~~~~------~~~~~~~~LCHG~aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 297 NDYFVDKAEKILESAMQR------KLGIDSYMICHGYSGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp CHHHHHHHHHHHHHHHHH------CTTCCSCCTTTSHHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHh------ccCCCCCCCCChHHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 999999998764321110 011112233444422 2256679999999998888763
No 43
>1g87_A Endocellulase 9G; endoglucanase, cellulose binding domain, (ALPH 6-helix barrel, beta barrel, hydrolase; 1.60A {Clostridium cellulolyticum} SCOP: a.102.1.2 b.2.2.2 PDB: 1ga2_A* 1k72_A* 1kfg_A*
Probab=91.24 E-value=6.7 Score=46.30 Aligned_cols=174 Identities=15% Similarity=0.147 Sum_probs=88.8
Q ss_pred ChhHHHHHHHHHHHHHHHHhhcCCCccccCC-c-----chhhhhhcc---CCccc-----ccchhHHHHHHHH-HHHHHc
Q 002978 185 NVTLKEKMTAVVSALSECQNKMGSGYLSAFP-S-----EQFDRFEAL---KPVWA-----PYYTIHKILAGLL-DQYTFA 249 (861)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~-~-----~~~~~~~~l---~~~W~-----pyYt~HkI~aGLl-d~y~~t 249 (861)
-+.+++.++.-.|.|++|+. .+|.+-.-- . ..|.+-|.. +..+. |--..-.-+++.| ++++.-
T Consensus 90 ~~d~ldeikwg~Dyllk~~~--~~~~~y~qVGdg~~DH~~w~~pe~~~~~r~~y~v~~~~pgsd~a~e~AAAlAaAS~vf 167 (614)
T 1g87_A 90 TKYIMDGIKWANDYFIKCNP--TPGVYYYQVGDGGKDHSWWGPAEVMQMERPSFKVDASKPGSAVCASTAASLASAAVVF 167 (614)
T ss_dssp HHHHHHHHHHHHHHHHHTCC--STTCEEEEESCHHHHHTCCSCGGGCCSCCCEEEECSSSCCHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHhcc--CCCcEEEEecCCCcCccccCCcccCCCCCcceEecCCCCccHHHHHHHHHHHHHHHhc
Confidence 36888899999999999965 333221100 0 011111111 11110 1111112233333 344443
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhcccccccc-cccc--cccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc
Q 002978 250 DN------TQALKMTKWMVEYFYNRVQNVITKYSVE-RHWN--SLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCF 320 (861)
Q Consensus 250 G~------~~aL~va~~~ad~~~~r~~~~~~~~~~~-~~~~--~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~ 320 (861)
.+ ++.|+.|+++-+|..+.-... ..+.. .... -...| +..+-+|||..|||++||+.|+.+... +
T Consensus 168 k~~D~~yA~~~L~~Ak~l~~fA~~~~~~~--~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~-~ 241 (614)
T 1g87_A 168 KSSDPTYAEKCISHAKNLFDMADKAKSDA--GYTAASGYYSSSSFYDD---LSWAAVWLYLATNDSTYLDKAESYVPN-W 241 (614)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHHCCCT--TCCTTTTTSCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTGGG-S
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHcCCCC--CCCcCcCCcCCCCchhH---HHHHHHHHHHHhCCHHHHHHHHHHHHh-h
Confidence 32 578888999888887642211 00000 0000 01123 446778999999999999999875332 1
Q ss_pred cchhcccCCCC--CCCcccCCccchhHHHHH-HHhcCCcHHHHHHHHHHHHhh
Q 002978 321 LGLLAVQADDI--SGFHANTHIPVVIGSQMR-YEVTGDPLYKVTGTFFMDIVN 370 (861)
Q Consensus 321 ~~~l~~~~D~l--~g~HanthiP~~~G~a~~-Y~~TGD~~y~~aa~~fwd~V~ 370 (861)
.. ..+.... ...+.= -.+..|+..+ .++++++.|++.++.+.+...
T Consensus 242 ~~--~~~~~~~~~~~~~~W--d~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~ 290 (614)
T 1g87_A 242 GK--EQQTDIIAYKWGQCW--DDVHYGAELLLAKLTNKQLYKDSIEMNLDFWT 290 (614)
T ss_dssp CB--CTTSSSBCCSSCCBT--TBCHHHHHHHHHHHHCCHHHHHHHHHHHHHHT
T ss_pred cc--ccccccccccCCcCc--cchHHHHHHHHHhccCcHHHHHHHHHHHHHhh
Confidence 00 0000000 001100 1134565554 778999999999998887654
No 44
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=91.10 E-value=1.3 Score=51.29 Aligned_cols=191 Identities=17% Similarity=0.141 Sum_probs=106.3
Q ss_pred HhcCChhHHHHHHHHHHHHHHHHhh--cCCCccccCCcchhhhhhccC----CcccccchhHHHHHHHHHHHHHcCChhH
Q 002978 181 ASTHNVTLKEKMTAVVSALSECQNK--MGSGYLSAFPSEQFDRFEALK----PVWAPYYTIHKILAGLLDQYTFADNTQA 254 (861)
Q Consensus 181 a~t~D~~L~~k~d~~Vd~L~~~Q~~--~~dGYL~a~~~~~~~~~~~l~----~~W~pyYt~HkI~aGLld~y~~tG~~~a 254 (861)
..|+|+++.++++++.+.|.+.|.. ..+|-++.+-...-..|.... ..=-.|| .-|+-+|.++++++.
T Consensus 187 ~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~Y------EYLlK~~il~~d~~y 260 (511)
T 1dl2_A 187 YLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFY------EYLLKQYLLTHETLY 260 (511)
T ss_dssp HHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHH------HHHHHHHHHHCCHHH
T ss_pred HHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHH------HHHHHHHHhcCCHHH
Confidence 4799999999999999999998821 156665544211001111100 0001344 347788888899999
Q ss_pred HHHHHHHHHHHHHHhhhcc--------cccc------cccccccccccccchHHHHHHHHHH---------cCCHHHHHH
Q 002978 255 LKMTKWMVEYFYNRVQNVI--------TKYS------VERHWNSLNEETGGMNDVLYRLYTI---------TQDPKHLLL 311 (861)
Q Consensus 255 L~va~~~ad~~~~r~~~~~--------~~~~------~~~~~~~l~~E~GGmne~L~~LY~~---------TGd~ryL~l 311 (861)
+++-....+-+.+.+.... .... ......-+.|-.||| .+|.-...+ ..+++|+++
T Consensus 261 ~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~-~aLg~~~~~~~~~a~~~~~~~~~~~~~ 339 (511)
T 1dl2_A 261 YDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGL-LASGSTEGLSIHEARRRPFFSKSDWDL 339 (511)
T ss_dssp HHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHH-HHHHHHTTCCHHHHTTSTTCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHH-HHhccccCCChhhhhhcccccHHHHHH
Confidence 8888888887776653211 0000 000011244666775 233221111 134589999
Q ss_pred hhhcccccc---------cchhcccCCC-----------C-CC--Cc-ccCC---cc-chhHHHHHHHhcCCcHHHHHHH
Q 002978 312 AHLFDKPCF---------LGLLAVQADD-----------I-SG--FH-ANTH---IP-VVIGSQMRYEVTGDPLYKVTGT 363 (861)
Q Consensus 312 A~~F~~~~~---------~~~l~~~~D~-----------l-~g--~H-anth---iP-~~~G~a~~Y~~TGD~~y~~aa~ 363 (861)
|+.+.+.|+ +.|....-+. . .. .+ ...| =| .++..--+|++|||+.|++.+.
T Consensus 340 a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre~gw 419 (511)
T 1dl2_A 340 AKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGA 419 (511)
T ss_dssp HHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHHHHH
Confidence 987743322 1121100000 0 00 00 0111 13 4677888899999999999999
Q ss_pred HHHHHhhccceeeecC
Q 002978 364 FFMDIVNASHGYATGG 379 (861)
Q Consensus 364 ~fwd~V~~~h~yvTGG 379 (861)
..++.+.+ +.-+-.|
T Consensus 420 ~~f~ai~k-~~rt~~G 434 (511)
T 1dl2_A 420 EIATSFFE-NTCVDCN 434 (511)
T ss_dssp HHHHHHHH-HHEESTT
T ss_pred HHHHHHHH-HhccccC
Confidence 99999874 5555544
No 45
>2xfg_A Endoglucanase 1; hydrolase-sugar binding protein complex, family-9 glycoside hydrolase, hydrolase, sugar binding protein; 1.68A {Clostridium thermocellum}
Probab=90.76 E-value=15 Score=41.88 Aligned_cols=173 Identities=14% Similarity=0.127 Sum_probs=87.6
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccCC-c-----chhhhhhcc---CCccc-----ccchhHHHHHHHH-HHHHHcC
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAFP-S-----EQFDRFEAL---KPVWA-----PYYTIHKILAGLL-DQYTFAD 250 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~-~-----~~~~~~~~l---~~~W~-----pyYt~HkI~aGLl-d~y~~tG 250 (861)
+.+++.++.-.|.|.+|+. .+|-+-.-- . ..|.+-|.. +..+. |--..-.-+++.| .+++.-.
T Consensus 112 ~d~ldeikwg~D~llk~~~--~~~~~y~qVgd~~~Dh~~W~~pe~~~~~R~~y~i~~~~pgsd~a~e~AAAlAaAS~vfk 189 (466)
T 2xfg_A 112 NHILNNIKWACDYFIKCHP--EKDVYYYQVGDGHADHAWWGPAEVMPMERPSYKVDRSSPGSTVVAETSAALAIASIIFK 189 (466)
T ss_dssp HHHHHHHHHHHHHHHHTCS--BTTEEEEEESCHHHHHTCCSCGGGCCSCCCEEEEESSSCCHHHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHHhcc--CCCcEEEEeCCCCccccccCCcccCCCCCceeEecCCCCccHHHHHHHHHHHHHHHhcc
Confidence 6888999999999999964 333221110 0 011111111 11110 1111112333333 4444433
Q ss_pred C------hhHHHHHHHHHHHHHHHhhhcccccccc-ccc---ccccccccchHHHHHHHHHHcCCHHHHHHhhhcccccc
Q 002978 251 N------TQALKMTKWMVEYFYNRVQNVITKYSVE-RHW---NSLNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCF 320 (861)
Q Consensus 251 ~------~~aL~va~~~ad~~~~r~~~~~~~~~~~-~~~---~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~ 320 (861)
+ ++.|+.|+++-+|..+.-... ..+.. ... .-...| +..+-+|||..|||++||+.|+.+... +
T Consensus 190 ~~D~~yA~~~L~~Ak~l~~fA~~~~~~~--~~~~~~~~Y~s~s~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~~~-~ 263 (466)
T 2xfg_A 190 KVDGEYSKECLKHAKELFEFADTTKSDD--GYTAANGFYNSWSGFYDE---LSWAAVWLYLATNDSSYLDKAESYSDK-W 263 (466)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHHHCCCT--TCCTTTTTSCCSSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHTTTT-S
T ss_pred ccCHHHHHHHHHHHHHHHHHHHhcCCcC--CCCccccccCCCCCCchH---HHHHHHHHHHHhCCHHHHHHHHHHHHH-h
Confidence 2 578888999888887643221 00100 000 001123 446778999999999999999875321 1
Q ss_pred cchhcccCCCC--CCCcccCCccchhHHHHH-HHhcCCc-HHHHHHHHHHHHhh
Q 002978 321 LGLLAVQADDI--SGFHANTHIPVVIGSQMR-YEVTGDP-LYKVTGTFFMDIVN 370 (861)
Q Consensus 321 ~~~l~~~~D~l--~g~HanthiP~~~G~a~~-Y~~TGD~-~y~~aa~~fwd~V~ 370 (861)
.. ..+.... ...+. =-.+..|...+ .++++++ .|++.++.+.+...
T Consensus 264 ~~--~~~~~~~~~~~~~~--Wd~~~~g~~~lla~~~~~~~~~~~~~~~~~~~~~ 313 (466)
T 2xfg_A 264 GY--EPQTNIPKYKWAQC--WDDVTYGTYLLLARIKNDNGKYKEAIERHLDWWT 313 (466)
T ss_dssp CB--STTSSSBCCSSCCB--TTBCHHHHHHHHHHHHCSSCHHHHHHHHHHHHHT
T ss_pred cc--ccccccccccCcCC--cchhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Confidence 00 0000000 00010 01134565553 6778877 89988888877654
No 46
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=86.85 E-value=2.4 Score=49.29 Aligned_cols=127 Identities=11% Similarity=-0.003 Sum_probs=68.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccCC-cchh----hhhhcc---CCcccccchh-HHHHHHHHHHHHHcCC-----
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAFP-SEQF----DRFEAL---KPVWAPYYTI-HKILAGLLDQYTFADN----- 251 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~-~~~~----~~~~~l---~~~W~pyYt~-HkI~aGLld~y~~tG~----- 251 (861)
+.+++.++.-+|.|.+||... +|.+-.-- ...| .+=++. +.+...--+. -.+-|+|-.+++.-++
T Consensus 188 ~d~ldeikwg~D~llk~~~~~-~g~~y~~v~~~~w~g~~~~Pe~~~~~R~~~~~~t~~~~~~AAalA~as~vf~~~D~~y 266 (537)
T 3gzk_A 188 PPALEVAREEIAWLLTMQDPA-TGGVYHKVTTPSFPPLDTRPEDDDAPLVLSPISYAATATFCAAMAHAALVYRPFDPAL 266 (537)
T ss_dssp CHHHHHHHHHHHHHHHTBCTT-TCCBBSEEECSSCCCTTCCGGGCCSCEEECCBCHHHHHHHHHHHHHHHHHHTTTCHHH
T ss_pred HHHHHHHHHHHHHHHhcccCC-CCeEEEEecCCCcCCCCcCcccCCCcceEeecCCcHHHHHHHHHHHHHHhhcccCHHH
Confidence 578899999999999999621 13322100 0001 000110 1111100011 2234444456666666
Q ss_pred -hhHHHHHHHHHHHHHHHhhhcccc-cccccccc---cccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002978 252 -TQALKMTKWMVEYFYNRVQNVITK-YSVERHWN---SLNEETGGMNDVLYRLYTITQDPKHLLLAHLFD 316 (861)
Q Consensus 252 -~~aL~va~~~ad~~~~r~~~~~~~-~~~~~~~~---~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~ 316 (861)
++.|+.|+++-+|+.+.-...... .......+ ....| +..+.+|||+.|||++||+.|+.+.
T Consensus 267 A~~~L~~A~~~~~fa~~~~~~~~~~~~~~~~~~Y~~~~~~De---l~wAA~~Ly~aTgd~~Yl~~a~~~~ 333 (537)
T 3gzk_A 267 SSCCADAARRAYAWLGAHEMQPFHNPDGILTGEYGDAELRDE---LLWASCALLRMTGDSAWARVCEPLL 333 (537)
T ss_dssp HHHHHHHHHHHHHHHHTSCCCCCCCCTTCCSCCCCCSCCHHH---HHHHHHHHHHHHCCGGGHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcccccccCCcccccCCcCCCccchH---HHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 789999999999997542211000 00000000 01123 5578899999999999999998653
No 47
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=83.66 E-value=4.2 Score=47.68 Aligned_cols=173 Identities=12% Similarity=0.121 Sum_probs=92.5
Q ss_pred ChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHHcCChhHHHHHHHHHHH
Q 002978 185 NVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFADNTQALKMTKWMVEY 264 (861)
Q Consensus 185 D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~tG~~~aL~va~~~ad~ 264 (861)
.+++.+.+....+.+.+.... |...-...+.+ -|| .+-|++..|++||+++.|+-+...++.
T Consensus 273 a~~~L~aA~~a~~fa~~~~~~----y~~~g~~~~~D----------e~~----~~WAA~eLy~ATgd~~YL~~a~~~a~~ 334 (586)
T 3h7l_A 273 QQKYRNAAENGYWHLKEHNTQ----YLNDGEENIID----------EYC----ALLASVELFKATKETRYLEESRLWAQR 334 (586)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH----HSTTSCCCHHH----------HHH----HHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHhcCcc----ccCCCCccchh----------HHH----HHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 456777777777777666541 21111111111 121 234556999999999999999999999
Q ss_pred HHHHhhhcccccccccccc--------cccccccch-HHHHHHHHHHcCCHHHHHHhhhcccccc----------cchh-
Q 002978 265 FYNRVQNVITKYSVERHWN--------SLNEETGGM-NDVLYRLYTITQDPKHLLLAHLFDKPCF----------LGLL- 324 (861)
Q Consensus 265 ~~~r~~~~~~~~~~~~~~~--------~l~~E~GGm-ne~L~~LY~~TGd~ryL~lA~~F~~~~~----------~~~l- 324 (861)
+.+++..... ..-.|. ..|....|+ ..+|++|.++++++++.+.|+....... ..|.
T Consensus 335 l~~~~~~~~~---~g~~w~~~d~~~r~~~d~a~~gl~~iaLl~l~~~~~d~~~~~~a~~~i~~~~d~~l~~~~~~~npfg 411 (586)
T 3h7l_A 335 LVARQMSDEQ---IQHFWSANQDGSRPYFHAAEAGLPTIALCEYLAIEDDSVQTESVKCIVNRACEFEIKISNKVTNPFG 411 (586)
T ss_dssp HHTTEECCSS---CSSEEBSSSSSSSBCCCTTTTTHHHHHHHHHHHHCCSTTTTHHHHHHHHHHHHHHHHHHHSSCCSSC
T ss_pred HHHhccCCcc---CCCcCCCcccCCcccccccccHHHHHHHHHhhhhcCChHHHHHHHHHHHHHhhhhhhhcccccCccc
Confidence 8877632100 000121 112222344 4789999999998644444432211100 0110
Q ss_pred -----c-----ccCCCCCCCcccC-----Ccc------chhHHHHHHHhcCC----cHHHHHHHHHHHHhhcc----cee
Q 002978 325 -----A-----VQADDISGFHANT-----HIP------VVIGSQMRYEVTGD----PLYKVTGTFFMDIVNAS----HGY 375 (861)
Q Consensus 325 -----~-----~~~D~l~g~Hant-----hiP------~~~G~a~~Y~~TGD----~~y~~aa~~fwd~V~~~----h~y 375 (861)
. ..++...-.|.+. |.. ..+=++..|..++| ++|++.+..-+|-+..+ .+|
T Consensus 412 ~~~~~~~~~~~~~~~~y~~p~~~~~~y~WqGsN~~~an~a~~~~~a~~~~~~~~~~~~y~~~a~~qldyiLG~Np~~~s~ 491 (586)
T 3h7l_A 412 YPRQYVKGVNESKRDAFFVAHNNESGYWWQGENARLGSLATMAYLAQPHIASQEIQQQLSVFAQDALNWIVGLNPYDMCM 491 (586)
T ss_dssp CCCEEECCTTSCCEEESSCCSSSTTSSCCCCCHHHHHHHHHHHHHSGGGCCCHHHHHHHHHHHHHHHHHHBTCSTTCCBC
T ss_pred cHHHHhhhhccccccccccccCCCCCCeeeChHHHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHhhhhhccCCCCCCcc
Confidence 0 0111111112111 111 11113444788999 89999999999988653 367
Q ss_pred eec
Q 002978 376 ATG 378 (861)
Q Consensus 376 vTG 378 (861)
+||
T Consensus 492 v~G 494 (586)
T 3h7l_A 492 LDG 494 (586)
T ss_dssp BTT
T ss_pred EEe
Confidence 776
No 48
>2yik_A Endoglucanase; hydrolase; 2.10A {Clostridium thermocellum}
Probab=77.25 E-value=11 Score=44.54 Aligned_cols=62 Identities=15% Similarity=0.142 Sum_probs=37.3
Q ss_pred hhHHHHHHHHHHHHHHHhhhcccccccccccc---cccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002978 252 TQALKMTKWMVEYFYNRVQNVITKYSVERHWN---SLNEETGGMNDVLYRLYTITQDPKHLLLAHLFD 316 (861)
Q Consensus 252 ~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~---~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~ 316 (861)
++.|+.|+++-+|..+.-.......+.....+ -...| +..+-+|||..|||+.||+.|+.+.
T Consensus 242 ~~~L~~Ak~~~~fA~~~~~~y~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 306 (611)
T 2yik_A 242 AKSLDYAKALFDFAEKNPKGVVQGEDGPKGYYGSSKWQDD---YCWAAAWLYLATQNEHYLDEAFKYY 306 (611)
T ss_dssp HHHHHHHHHHHHHHHHSCCCCCCGGGTTTTTSCCCCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHcCCcccCCCcccCcCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 57888888888888753222111111000000 01122 3467789999999999999998753
No 49
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=77.01 E-value=4.5 Score=45.77 Aligned_cols=72 Identities=14% Similarity=0.067 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCChhHHHHHHHHHHHHHHHhhhccccccccc----ccccccccccchHHHHHHHHHHcCCHHHHHHhhh
Q 002978 239 LAGLLDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVER----HWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHL 314 (861)
Q Consensus 239 ~aGLld~y~~tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~----~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~ 314 (861)
+..++-+|+..+++.+.++++.|+.-+. +++ +....... +......-+ +..+|.+||+.|++++||++|..
T Consensus 379 ll~~vra~~~s~D~~Lw~~~~~ma~~~~--lgd-i~~~~~~~~~~~~~~~~~sp~--lL~allEL~~atq~~~~l~lA~~ 453 (543)
T 2v8i_A 379 LISYARAYAIDNDPLLWKVARGIANDQG--LGD-IGTAPGKEVKVNMDTTNSDPY--ALFALLDLYHASQVADYRKLAEK 453 (543)
T ss_dssp HHHHHHHHHHSCCHHHHHHHHHHHHHTT--CEE-CTTBTTBSCEECTTCCCCCHH--HHHHHHHHHHHHCCHHHHHHHHH
T ss_pred hHHHHHHHHcCCCHHHHHHHHHHHhhCC--ccc-cCCCcCcccccccCCCCcCHH--HHHHHHHHHHHhCCHHHHHHHHH
Confidence 4456789999999999999999987663 111 11100000 011111111 35799999999999999999976
Q ss_pred c
Q 002978 315 F 315 (861)
Q Consensus 315 F 315 (861)
.
T Consensus 454 ~ 454 (543)
T 2v8i_A 454 I 454 (543)
T ss_dssp H
T ss_pred H
Confidence 5
No 50
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=75.77 E-value=15 Score=40.48 Aligned_cols=130 Identities=10% Similarity=0.002 Sum_probs=77.6
Q ss_pred HHHHHHHHhc-CChhHHHHHHHHHHHHHHHHhhcCCCccccCCc-ch-hhhh--------hccCCcccccchhHHHHHHH
Q 002978 174 SASAHMWAST-HNVTLKEKMTAVVSALSECQNKMGSGYLSAFPS-EQ-FDRF--------EALKPVWAPYYTIHKILAGL 242 (861)
Q Consensus 174 sAlA~~~a~t-~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~-~~-~~~~--------~~l~~~W~pyYt~HkI~aGL 242 (861)
..++.++... .|+.+++.+.+.++.+.+.+...++|-. +|. .. .+.. ......|.-=-.+ |...+
T Consensus 213 ~~L~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~g~~--wp~g~~~~~~~~~~~~~~~~~~~~~WChG~~G--i~~~l 288 (409)
T 2g0d_A 213 CILAYAHIKGYSNEASLSALQKIIFIYEKFELERKKQFL--WKDGLVADELKKEKVIREASFIRDAWCYGGPG--ISLLY 288 (409)
T ss_dssp HHHHHHHHHTCCCHHHHHHHHHHHHHHHHHCCCGGGTTC--CCSEECHHHHHHTSCCSCCSCCCCCSSSSHHH--HHHHH
T ss_pred HHHHHHHHhCCCChhHHHHHHHHHHHHHHHHhcCCCCCc--CCCccccHhhhcccccccCCCCCCcCCCCCHH--HHHHH
Confidence 3444444333 3899999999999999766542233321 111 00 0000 0112223211122 44556
Q ss_pred HHHHHHcCChhHHHHHHHHHHHHHHHhhhcccccccccccccccccccchHHHHHHHHHHcCCHHHHHHhhhc
Q 002978 243 LDQYTFADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTITQDPKHLLLAHLF 315 (861)
Q Consensus 243 ld~y~~tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F 315 (861)
+.+|+.+++++.++.+.+.++.+.++-.. .... ..-|. ..|+.+.|.++|+.|+|++|++.|+.|
T Consensus 289 ~~~~~~~~d~~~~~~a~~~~~~~~~~~~~------~~~~-~LCHG-~aG~~~~l~~l~~~~~~~~~~~~a~~~ 353 (409)
T 2g0d_A 289 LYGGLALDNDYFVDKAEKILESAMQRKLG------IDSY-MICHG-YSGLIEICSLFKRLLNTKKFDSYMEEF 353 (409)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHHHHCTT------CCSC-CTTTS-HHHHHHHHHHHHHHHCCCTTHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHHHHHHHHhccC------CCCC-CCCCh-HHHHHHHHHHHHHHhCCHHHHHHHHHc
Confidence 68889999999999999999988764100 0011 01122 226789999999999999999999875
No 51
>1clc_A Endoglucanase CELD; EC: 3.2.1.4; cellulase, glycosyl hydrolase; 1.90A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2
Probab=75.75 E-value=6.1 Score=46.83 Aligned_cols=128 Identities=12% Similarity=0.040 Sum_probs=63.4
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccCC-cchhhhhhccCCcccccchh---H----HHHHHHHHHHHHcC------C
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAFP-SEQFDRFEALKPVWAPYYTI---H----KILAGLLDQYTFAD------N 251 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~-~~~~~~~~~l~~~W~pyYt~---H----kI~aGLld~y~~tG------~ 251 (861)
+.+++.++.-.|.|.+||...++|.+..-- ...++.+..-+++-.|.|.. . ..-|+|-++++.-. .
T Consensus 232 ~d~ldeikwg~Dyllk~q~~~~~g~~y~~vgd~~~~~~~~Pe~~~~~R~~~~~~s~~a~e~AAAlAaAS~vfk~~D~~yA 311 (639)
T 1clc_A 232 PDFLDELKYEIDWILTMQYPDGSGRVAHKVSTRNFGGFIMPENEHDERFFVPWSSAATADFVAMTAMAARIFRPYDPQYA 311 (639)
T ss_dssp CHHHHHHHHHHHHHHTTBCTTSSCCBEEEEECSSCCCSCCGGGCCSCCEEEEECHHHHHHHHHHHHHHHHHHTTTCHHHH
T ss_pred HHHHHHHHHHHHHHHHhccccCCCeEEEEecCCCCCCCCCchhcCCCceEecCCcHHHHHHHHHHHHHHHhccccCHHHH
Confidence 678999999999999999722104332100 00011000000000111100 1 12233334444433 2
Q ss_pred hhHHHHHHHHHHHHHHHhhhccccc-ccccccc---cccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002978 252 TQALKMTKWMVEYFYNRVQNVITKY-SVERHWN---SLNEETGGMNDVLYRLYTITQDPKHLLLAHLFD 316 (861)
Q Consensus 252 ~~aL~va~~~ad~~~~r~~~~~~~~-~~~~~~~---~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~ 316 (861)
++.|+.|+++-+|..+.-......- ....-.+ ....| +..+-+|||..|||+.||+.|+.+.
T Consensus 312 ~~~L~~Ak~l~~fA~~~~~~~y~~~~~~~~g~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 377 (639)
T 1clc_A 312 EKCINAAKVSYEFLKNNPANVFANQSGFSTGEYATVSDADD---RLWAAAEMWETLGDEEYLRDFENRA 377 (639)
T ss_dssp HHHHHHHHHHHHHHHHCCSCCCCCCTTCCSCCCCCSCSHHH---HHHHHHHHHHHHCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCCCccCCCccccccccCCCCcchH---HHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4788888888888875321100000 0000000 01123 3467789999999999999987653
No 52
>2yug_A Protein FRG1; spliceosome, facioscapulohumeral muscular dystrophy, FSHD1, beta-trefoil, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=72.72 E-value=36 Score=32.83 Aligned_cols=92 Identities=21% Similarity=0.274 Sum_probs=54.5
Q ss_pred ceEEEeccCCceEeeecCCC--CCcccccEEEEEEecCCCccccccccccCCceeeecCCCCCCceeeeeccccceEEeC
Q 002978 674 SAFVLSNSNQSITMEKFPES--GTDAALHATFRLIMKEESSSEVSSLKDVIGKSVMLEPFDFPGMLVVQQGTDGELVVSD 751 (861)
Q Consensus 674 ~~f~~~~~~~~~~~~~~p~~--g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~lepfd~Pg~~v~~~~~~~~l~v~~ 751 (861)
..|..+..||.+++.. |-. +....-.-+|.+..- .++.|.|.... |.|++-. +....+.+
T Consensus 34 ~~y~~A~~~G~~t~~~-~~~~~~~~~~~~E~f~l~~~-------------~~~~v~LRs~~--GkYLs~~--~~G~v~a~ 95 (155)
T 2yug_A 34 GAYIHALDNGLFTLGA-PHREVDEGPSPPEQFTAVKL-------------SDSRIALKSGY--GKYLGIN--SDGLVVGR 95 (155)
T ss_dssp SCBEEECTTSCEEECC-CCSSSSCCCCTTTCEEEEEC-------------SSSCEEEEETT--SCBEEEC--SSSBEEEC
T ss_pred CCEEEEEcCCcEEEcc-ccccccCCCCCcceEEEEEC-------------CCCEEEEEeCC--CCEEEec--CCCcEEec
Confidence 3566666667655432 321 333444558887642 11234454433 7788763 22222344
Q ss_pred CCCCCCCceEEEeecCCCCCceEEEeccCCCCeeEEec
Q 002978 752 SPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYSG 789 (861)
Q Consensus 752 ~~~~~~~s~f~~vpgl~g~~g~vsle~~~~pg~~~~~~ 789 (861)
..+-++..+|.+++- + |.+.|.+. -|+||.+.
T Consensus 96 a~~~g~~E~F~l~~~-~---G~~aLra~--nG~yl~~~ 127 (155)
T 2yug_A 96 SDAIGPREQWEPVFQ-D---GKMALLAS--NSCFIRCN 127 (155)
T ss_dssp CSSCCTTTBEEEECS-T---TCCEEEET--TSCBEEEC
T ss_pred cCCCCCCCEEEEEEE-C---CEEEEEeC--CCCEEEEc
Confidence 455568899999986 3 57999993 59999873
No 53
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=71.85 E-value=11 Score=42.54 Aligned_cols=87 Identities=18% Similarity=0.218 Sum_probs=61.7
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
-.+||=+++.+|+.++|++|-+-+..|... + +=|=|++.... -..++.-...-.|| ++.+||+.|++
T Consensus 375 ~~~yll~~vra~~~s~D~~Lw~~~~~ma~~----~---~lgdi~~~~~~-~~~~~~~~~~~sp~-----lL~allEL~~a 441 (543)
T 2v8i_A 375 GNEFLISYARAYAIDNDPLLWKVARGIAND----Q---GLGDIGTAPGK-EVKVNMDTTNSDPY-----ALFALLDLYHA 441 (543)
T ss_dssp CHHHHHHHHHHHHHSCCHHHHHHHHHHHHH----T---TCEECTTBTTB-SCEECTTCCCCCHH-----HHHHHHHHHHH
T ss_pred CchhhHHHHHHHHcCCCHHHHHHHHHHHhh----C---CccccCCCcCc-ccccccCCCCcCHH-----HHHHHHHHHHH
Confidence 478999999999999999998877776543 3 44556653211 01122122344465 45567899999
Q ss_pred cCChhHHHHHHHHHHHHHHH
Q 002978 249 ADNTQALKMTKWMVEYFYNR 268 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~~~r 268 (861)
|++++.++.|.++++-+.++
T Consensus 442 tq~~~~l~lA~~~g~nl~~~ 461 (543)
T 2v8i_A 442 SQVADYRKLAEKIGDNIIKI 461 (543)
T ss_dssp HCCHHHHHHHHHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHHHHH
Confidence 99999999999999988754
No 54
>1ut9_A Cellulose 1,4-beta-cellobiosidase; hydrolase, glycoside hydrolase, family 9, cellobiohydrolase; 2.1A {Clostridium thermocellum} SCOP: a.102.1.2 b.1.18.2 PDB: 1rq5_A*
Probab=60.38 E-value=22 Score=41.81 Aligned_cols=126 Identities=8% Similarity=-0.057 Sum_probs=66.1
Q ss_pred hhHHHHHHHHHHHHHHHHhhcCCCccccC-----Ccchhhhh-------hcc---CCcccccchhHHHHHH-HHHHHHHc
Q 002978 186 VTLKEKMTAVVSALSECQNKMGSGYLSAF-----PSEQFDRF-------EAL---KPVWAPYYTIHKILAG-LLDQYTFA 249 (861)
Q Consensus 186 ~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~-----~~~~~~~~-------~~l---~~~W~pyYt~HkI~aG-Lld~y~~t 249 (861)
+.+++.++.-.|.|.+||. ++|+...+ ...-...| ++. +.+..|--..-.-+|+ |-++++.-
T Consensus 227 ~d~ldeikwg~D~llk~q~--~~g~~~~~~g~v~~~~~D~~w~g~~~~Pe~~~~~R~~~~p~t~~~~~~AAalAaas~vf 304 (609)
T 1ut9_A 227 PDILDEARWEIEFFKKMQV--TEKEDPSIAGMVHHKIHDFRWTALGMLPHEDPQPRYLRPVSTAATLNFAATLAQSARLW 304 (609)
T ss_dssp CHHHHHHHHHHHHHHHHBC--CTTTCGGGTTCEECEEEESSCCCSSCCGGGCCSBEEECCEEHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc--CCCCcceEEEEecCCCCCcccCCCCCChhhCCCceeecCCCcHHHHHHHHHHHHHHHhc
Confidence 6799999999999999998 77751100 00000011 100 1111111111112233 33344433
Q ss_pred CC------hhHHHHHHHHHHHHHHHhhhcccccc-c----ccccc--cccccccchHHHHHHHHHHcCCHHHHHHhhhcc
Q 002978 250 DN------TQALKMTKWMVEYFYNRVQNVITKYS-V----ERHWN--SLNEETGGMNDVLYRLYTITQDPKHLLLAHLFD 316 (861)
Q Consensus 250 G~------~~aL~va~~~ad~~~~r~~~~~~~~~-~----~~~~~--~l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~ 316 (861)
.+ ++.|+.|+++-+|..+.-........ . ..... ....| +..+-+|||..|||+.||+.|+.+.
T Consensus 305 k~~d~~ya~~~L~~A~~~~~fa~~~~~~y~~~~~~~~~~~~~~Y~ss~~~DE---l~WAAawLy~ATgd~~Yl~~a~~~~ 381 (609)
T 1ut9_A 305 KDYDPTFAADCLEKAEIAWQAALKHPDIYAEYTPGSGGPGGGPYNDDYVGDE---FYWAACELYVTTGKDEYKNYLMNSP 381 (609)
T ss_dssp TTTCHHHHHHHHHHHHHHHHHHHHCTTCCBCCCCSSSSCBSCCCCBSCCHHH---HHHHHHHHHHHHCCHHHHHHHHTST
T ss_pred ccCCHHHHHHHHHHHHHHHHHHHhCcccccccccccCccCCCCCCCCCcccH---HHHHHHHHHHHhCCHHHHHHHHHhh
Confidence 22 57888899988888764222111000 0 00000 01123 4467789999999999999998753
No 55
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=57.32 E-value=1.1e+02 Score=34.04 Aligned_cols=199 Identities=13% Similarity=0.113 Sum_probs=102.2
Q ss_pred CCCCCCchhhhccCccccccccccchHHHHHHhhcCCCCCCCC---cCCcccccCCCeEeCCCCchH-HHHHHHHhhhhc
Q 002978 56 HLTPTDDSAWSNLLPRKMLSETDEFSWTMIYRKMKNPDGFKLA---GDFLKEVSLHDVKLDPSSLHW-RAQQTNLEYLLM 131 (861)
Q Consensus 56 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~l~~~pl~~V~L~~~~~~~-~~~~~~~~~ll~ 131 (861)
-|.++.-++|++.+-|-- +.-.-|.+.|-...+....-|++ ......+++.+ ++.|+. +.-+..++.|+.
T Consensus 19 ~~~~~~~~~w~~y~~~s~--~~~~~~~a~l~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~y~s~~A~~iAd~ll~ 92 (408)
T 1r76_A 19 SLPDTQRAAWQEYLARSE--AQLSRDKASLAAELAPGQPLPPPPAEGKGADTMPLDK----PAAWYTSKAARHVADVIVS 92 (408)
T ss_dssp SCSSSSCHHHHHHHHHHH--HHHHHHHHHHHHHSCTTCCCCCCCCCSCCGGGSCSSS----CGGGGGSHHHHHHHHHHHH
T ss_pred cCCHHHHHHHHHHHHHhH--HHHHHHHHHHHHHhccCCCCCCCCCCCCCccccccCC----chhhhchHHHHHHHHHHHH
Confidence 457788889999775421 11124566676776663322222 11234566665 356877 455777777775
Q ss_pred cCcch--hhHhHHHhcCCCCCCCCC------------CCC---cCC----CcCccccchhHHHHHHHHHHHh-c--CChh
Q 002978 132 LDVDS--LVWSFQKTAGSPTAGKAY------------EGW---EDP----TCELRGHFVGHYLSASAHMWAS-T--HNVT 187 (861)
Q Consensus 132 ~d~dr--lL~nFR~~AGl~~~g~~y------------gGW---E~~----d~~l~Gh~~Gh~LsAlA~~~a~-t--~D~~ 187 (861)
.+... .-+|.-.+.-+..++..+ |.| +.. .+-++=.-+..-|-+|+.++.. + +++.
T Consensus 93 ~Q~~~GGW~kn~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~T~DnddTa~vl~aL~rv~~~~t~~~~~~ 172 (408)
T 1r76_A 93 FQTPAGGWGKNQPRDGALRLPGQHYTGENVAKVKSGSNDLDAARDRDWHYVGTIDNDATVTEIRFLAQVVSQLAPEEAAP 172 (408)
T ss_dssp HCCTTSCCCSSCCSSSCCCCTTCCSSCCCCCCCC---------CCCCCSSSSBCGGGTTHHHHHHHHHHHHHSCGGGCHH
T ss_pred ccccCCCCCCccccccccchhhhhcccccccccccccccchhhcccccCCCCCCCCchHHHHHHHHHHHHhhccccccHH
Confidence 54221 111111011111111111 112 110 0111112255678889988888 7 8999
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccc---hhHHHHHHHHHHHHHcC---------ChhHH
Q 002978 188 LKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYY---TIHKILAGLLDQYTFAD---------NTQAL 255 (861)
Q Consensus 188 L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyY---t~HkI~aGLld~y~~tG---------~~~aL 255 (861)
+++-+++-|+.|+..|- +||=..+|.... ..+ -.+-|+. +.|-|++ |.+.....+ .+++.
T Consensus 173 y~~Ai~Rgl~wlL~mQ~--~nGGWpqFdpdn-~~y----~~~IpFnDDvt~rvle~-L~~~~~~~~~~~~~~~~~~~~~~ 244 (408)
T 1r76_A 173 YRDAALKGIEYLLASQF--PNGGWPQVWPLE-GGY----HDAITYNDDALVHVAEL-LSDIAAGRDGFGFVPPAIRTRAL 244 (408)
T ss_dssp HHHHHHHHHHHHHHHSC--TTSCCBSBSSCC-CGG----GGSEECGGGHHHHHHHH-HHHHHHTCTTCTTSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHccC--CCCCCcCcCccc-ccc----ccCCCcCcHHHHHHHHH-HHHHHhccCcccccchhhhhhHH
Confidence 99999999999999999 776444443210 000 0011221 3333321 112222111 13788
Q ss_pred HHHHHHHHHHHHH
Q 002978 256 KMTKWMVEYFYNR 268 (861)
Q Consensus 256 ~va~~~ad~~~~r 268 (861)
..+.|-.+||.+.
T Consensus 245 ~av~Rgi~~Ll~~ 257 (408)
T 1r76_A 245 EATNAAIHCIVET 257 (408)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 8999999999853
No 56
>1ia6_A Cellulase CEL9M; cellullase, alpha barrel, hydrolase; 1.80A {Clostridium cellulolyticum} SCOP: a.102.1.2 PDB: 1ia7_A*
Probab=52.71 E-value=45 Score=37.57 Aligned_cols=122 Identities=11% Similarity=0.133 Sum_probs=63.7
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCC-ccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 170 GHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSG-YLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dG-YL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
-..+=|++.+|..|+|+.+++.+........++|. .+. +.. ...|--...+..+ ||. +.
T Consensus 211 DE~~WAAa~Ly~aTgd~~Yl~~a~~~~~~~~~~~~--~~~~~~~-------------~~~Wd~~~~g~~~---lla--~~ 270 (441)
T 1ia6_A 211 DDLAWAATWLYTATNDSTYITDAEQFITLGNTMNE--NKMQDKW-------------TMCWDDMYVPAAL---RLA--QI 270 (441)
T ss_dssp HHHHHHHHHHHHHHCCTHHHHHHHHHTTC--------CGGGCSS-------------CSSSSCCHHHHHH---HHH--HH
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHhhhhhccc--ccccCCC-------------cCCccchHHHHHH---HHH--hc
Confidence 45667899999999999999999887655444443 110 100 1123333333222 222 24
Q ss_pred cCChhHHHHHHHHHHHHHHHhhhcccccccccccccccccccchHHHHH--HHHHHcCCHHHHHHhhh
Q 002978 249 ADNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLY--RLYTITQDPKHLLLAHL 314 (861)
Q Consensus 249 tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~--~LY~~TGd~ryL~lA~~ 314 (861)
+++++..+.+.+.++++...+..-..++.....|....- .++.++. --++.+++++|+++|+.
T Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~---~~~~a~l~~~~~~~~~~~~y~~~A~~ 335 (441)
T 1ia6_A 271 TGKQIYKDAIEFNFNYWKTQVTTTPGGLKWLSNWGVLRY---AAAESMVMLVYCKQNPDQSLLDLAKK 335 (441)
T ss_dssp HCCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHH---HHHHHHHHHHHHHHSCCHHHHHHHHH
T ss_pred cCcHHHHHHHHHHHHHHHhhcccCCCCceecCCcchHHH---HHHHHHHHHHHHhhcCHHHHHHHHHH
Confidence 678888888888888776333211111110011211100 0232222 23678999999999975
No 57
>2w87_A Esterase D, XYL-CBM35; plant cell WALL degradation, carbohydrate protein binding, xylan, CMB35, glucuronic acid, hydrolase; HET: GCU; 1.60A {Cellvibrio japonicus} PDB: 2w46_A
Probab=46.34 E-value=65 Score=30.14 Aligned_cols=38 Identities=18% Similarity=0.231 Sum_probs=25.7
Q ss_pred eEEEEEEeCCCCCeeeEEEEeecC-CccCCCcEEEECCeec
Q 002978 538 RMTHTFSSKQEASQSSSLNLRIPL-WTNSNGAKATLNGQSL 577 (861)
Q Consensus 538 ~V~ltV~~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~v 577 (861)
.|+++|+.. +....+|.+|.-. ........|.|||+.+
T Consensus 40 ~v~~~V~v~--~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (139)
T 2w87_A 40 AVVWAIDAT--SSGRRTLTIRYANGGTANRNGSLVINGGSN 78 (139)
T ss_dssp EEEEEEEES--SCEEEEEEEEEECCSSSCCCEEEEETTTTT
T ss_pred EEEEEEECC--CCcEEEEEEEEECCCCCCceEEEEECCEEc
Confidence 566677653 3667888888864 3321258999999875
No 58
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=45.77 E-value=54 Score=36.80 Aligned_cols=120 Identities=12% Similarity=0.136 Sum_probs=65.5
Q ss_pred hHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHHc
Q 002978 170 GHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTFA 249 (861)
Q Consensus 170 Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~t 249 (861)
--.+=|++.+|..|+|+.+++.+....+.+.. + .+. ..-.|.-...+-.++ ..+.+
T Consensus 213 DE~~WAAa~Ly~aTgd~~Yl~~~~~~~~~~~~-~-----~~~-------------~~~~Wd~~~~g~~~l-----la~~~ 268 (433)
T 1ks8_A 213 DELVWAAAWLYRATNDNTYLNTAESLYDEFGL-Q-----NWG-------------GGLNWDSKVSGVQVL-----LAKLT 268 (433)
T ss_dssp HHHHHHHHHHHHHHCCHHHHHHHHHHHHHTTG-G-----GSC-------------CCCCSSCCHHHHHHH-----HHHHH
T ss_pred cHHHHHHHHHHHHhCCHHHHHHHHHHHHhcCc-C-----cCc-------------CCcCccchhhHHHHH-----Hhhcc
Confidence 45567899999999999999998876543311 0 000 012343333221111 12346
Q ss_pred CChhHHHHHHHHHHHHHHHhhhcccccccccccccccccccchHHHHHHHHHH-cCCHHHHHHhhh
Q 002978 250 DNTQALKMTKWMVEYFYNRVQNVITKYSVERHWNSLNEETGGMNDVLYRLYTI-TQDPKHLLLAHL 314 (861)
Q Consensus 250 G~~~aL~va~~~ad~~~~r~~~~~~~~~~~~~~~~l~~E~GGmne~L~~LY~~-TGd~ryL~lA~~ 314 (861)
++++..+.+..+++++......-+.++.....|....-- ..+-..+...++. +++++|+++|+.
T Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~~~WGs~~~~-~n~a~l~~~~~~~~~~~~~y~~~A~~ 333 (433)
T 1ks8_A 269 NKQAYKDTVQSYVNYLINNQQKTPKGLLYIDMWGTLRHA-ANAAFIMLEAAELGLSASSYRQFAQT 333 (433)
T ss_dssp CCHHHHHHHHHHHHHHHHTSCBCTTSCBCCCSTTHHHHH-HHHHHHHHHHHHTTSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHHHHhcCCcCCCCceeecCCchhHHH-HHHHHHHHHHHhcCCCHHHHHHHHHH
Confidence 888888999999988875432211122111122111000 0011234444566 899999999975
No 59
>2kll_A Interleukin-33; beta-trefoil, cytokine, polymorphism, secreted; NMR {Homo sapiens}
Probab=45.38 E-value=2e+02 Score=27.08 Aligned_cols=112 Identities=19% Similarity=0.267 Sum_probs=67.5
Q ss_pred CCCcceeeeeccCCceEEEeccCCceEeeecCCCCCcccccEEEEEEecCCCccccccccccCCceee--ecCCCCCCce
Q 002978 660 YNGQLVTFAQESGDSAFVLSNSNQSITMEKFPESGTDAALHATFRLIMKEESSSEVSSLKDVIGKSVM--LEPFDFPGML 737 (861)
Q Consensus 660 ~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~p~~g~~~~~~~~fr~~~~~~~~~~~~~p~~~~g~~v~--lepfd~Pg~~ 737 (861)
||+|-++|.-++|.-...+. -. .+.+.--.+.||.......| -.+.-+.+|+.+| |.|-- .-.
T Consensus 20 YNDQsitFv~EdgsYeIyve---------Dl--~kdqekDkVLlryY~Sq~ps--~etgdgvdg~~LmVnlSP~K--Df~ 84 (161)
T 2kll_A 20 YNDQSITFALEDESYEIYVE---------DL--KKDEKKDKVLLSYYESQHPS--NESGDGVDGKMLMVTLSPTK--DFW 84 (161)
T ss_dssp TTTEEEEEEECSSCEEEEEE---------EC--CSCCCCCCEEEEEEECCCCT--TTSCCCCSCCCEEEEEESSS--SEE
T ss_pred ccCceEEEEEeCCcEEEEeh---------hh--ccchhcceEEEEeccCCCCc--cccCCCccccEEEEEccccc--cee
Confidence 56666666555554333322 21 13333456778866443222 1223346777777 77765 444
Q ss_pred eeeeccccceEEeCCCCCCCCceEEEeecCCCCCceEEEeccCCCCeeEEe
Q 002978 738 VVQQGTDGELVVSDSPKEGDSSVFRLVAGLDGKDETISLEAVNQNGCFVYS 788 (861)
Q Consensus 738 v~~~~~~~~l~v~~~~~~~~~s~f~~vpgl~g~~g~vsle~~~~pg~~~~~ 788 (861)
+--...|+.+-+..-.-..+++.|.+.--.. ...||||-.++||.|+-+
T Consensus 85 LHANnkehSVELqkce~~lPdQaFFvlH~~s--s~cVSFEck~~PGvfiGV 133 (161)
T 2kll_A 85 LHANNKEHSVELHKCEKPLPDQAFFVLHNMH--SNCVSFECKTDPGVFIGV 133 (161)
T ss_dssp EEEETTTTEEEEEECCSSCCTTTCEEEEECS--SSCEEEEESSSTTEEEEE
T ss_pred EecCCccceeEeecccCCCCcceEEEEecCC--CceEEEEecCCCceEEEe
Confidence 5445566666665444457888888774443 479999999999999976
No 60
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=41.26 E-value=69 Score=34.82 Aligned_cols=91 Identities=18% Similarity=0.177 Sum_probs=60.6
Q ss_pred hhHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWASTHNVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQYTF 248 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t~D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y~~ 248 (861)
+..-|-+|+.++..++++.+++.+++-|+.|+..|- ++|=..+|.... ..+ -.+-|+.. -+++.+|.....
T Consensus 76 Ta~vl~~Larv~~~~~~~~y~~Ai~Rgl~wlL~mQ~--~nGGWpqFdpd~-~~Y----l~~IpFnD--DvtarvLelL~~ 146 (332)
T 1gxm_A 76 TITEMVFLAEVYKSGGNTKYRDAVRKAANFLVNSQY--STGALPQFYPLK-GGY----SDHATFND--NGMAYALTVLDF 146 (332)
T ss_dssp THHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCC--TTSCCBSEESCC-SGG----GGSEECGG--GHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhccccchHHHHHHHHHHHHHHhccC--CCCCccccCCCc-ccc----cccCCcch--HHHHHHHHHHHH
Confidence 567788999999989999999999999999999998 776555553210 000 11123322 134444433333
Q ss_pred cCC---------------hhHHHHHHHHHHHHHHH
Q 002978 249 ADN---------------TQALKMTKWMVEYFYNR 268 (861)
Q Consensus 249 tG~---------------~~aL~va~~~ad~~~~r 268 (861)
.+. .++...+.|-.+|+.+.
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~av~Rgid~Llk~ 181 (332)
T 1gxm_A 147 AANKRAPFDTDVFSDNDRTRFKTAVTKGTDYILKA 181 (332)
T ss_dssp HHTTCTTSCSTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCccccccccchhhhhHHHHHHHHHHHHHh
Confidence 321 57788999999999863
No 61
>2w3j_A Carbohydrate binding module; sugar-binding protein, family 35, uronic acid sugars; 1.70A {Uncultured bacterium}
Probab=37.15 E-value=2.1e+02 Score=26.82 Aligned_cols=38 Identities=13% Similarity=0.230 Sum_probs=26.0
Q ss_pred eEEEEEEeCCCCCeeeEEEEeec-CCccCCCcEEEECCeec
Q 002978 538 RMTHTFSSKQEASQSSSLNLRIP-LWTNSNGAKATLNGQSL 577 (861)
Q Consensus 538 ~V~ltV~~~~~~~~~ftL~LRIP-~Wa~~~~~~v~VNG~~v 577 (861)
.|+++|+.. +....+|.+|.- +........|.|||+.+
T Consensus 40 ~v~~~V~v~--~aG~Y~l~~ryang~~~~r~~~l~VNG~~~ 78 (145)
T 2w3j_A 40 SIVWSLSAA--SAKTYTAQIRFGNGGTSARRATVVVNDSQI 78 (145)
T ss_dssp EEEEEEEES--SCEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC--CCeEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 567777663 367788888886 33222257999999875
No 62
>2w47_A Lipolytic enzyme, G-D-S-L; hydrolase; HET: UNF; 1.40A {Clostridium thermocellum} PDB: 2w1w_A
Probab=30.54 E-value=1.6e+02 Score=27.37 Aligned_cols=38 Identities=21% Similarity=0.220 Sum_probs=22.9
Q ss_pred eEEEEEEeCCCCCeeeEEEEeecC-CccCCCcEEEECCeec
Q 002978 538 RMTHTFSSKQEASQSSSLNLRIPL-WTNSNGAKATLNGQSL 577 (861)
Q Consensus 538 ~V~ltV~~~~~~~~~ftL~LRIP~-Wa~~~~~~v~VNG~~v 577 (861)
.|+++|+.. ++...+|.+|.=. -.......|.|||+.+
T Consensus 41 ~v~~~V~v~--~aG~Y~l~~ryan~~~~~~~~~l~VNG~~~ 79 (144)
T 2w47_A 41 YIEWNVNAP--SSGSYALIFRYANGTTANRPMRITVNGNIV 79 (144)
T ss_dssp EEEEEEEES--SSEEEEEEEEEECCSSSCCCEEEEETTEEE
T ss_pred EEEEEEECC--CCcEEEEEEEEECCCCCCeEEEEEECCeEe
Confidence 566666653 2566777777622 1111257999999863
No 63
>3gzk_A Cellulase; fold from GH9 from CAZY database, glycosidase, hydrolase; 1.80A {Alicyclobacillus acidocaldarius subsp} PDB: 3ez8_A 3h2w_A* 3h3k_A* 3rx5_A* 3rx7_A* 3rx8_A*
Probab=29.43 E-value=1e+02 Score=35.54 Aligned_cols=75 Identities=16% Similarity=0.061 Sum_probs=50.2
Q ss_pred HHHHHHhcCC------cHHHHHHHHHHHHhhccceeeecCCCCCCCCCCCcccccCCCcCcccchhhHHHHHHHHhhhcc
Q 002978 346 SQMRYEVTGD------PLYKVTGTFFMDIVNASHGYATGGTSAGEFWSDPKRLASTLGTENEESCTTYNMLKVSRHLFRW 419 (861)
Q Consensus 346 ~a~~Y~~TGD------~~y~~aa~~fwd~V~~~h~yvTGG~g~~E~f~~p~~l~~~l~~~~~ETCas~nmlkl~~~Lf~~ 419 (861)
+|..+++-++ ++++++|+..|+...++..-. +..+.. .....|+.+.-.=+++.=+-.||+.
T Consensus 252 lA~as~vf~~~D~~yA~~~L~~A~~~~~fa~~~~~~~---------~~~~~~---~~~~~Y~~~~~~Del~wAA~~Ly~a 319 (537)
T 3gzk_A 252 MAHAALVYRPFDPALSSCCADAARRAYAWLGAHEMQP---------FHNPDG---ILTGEYGDAELRDELLWASCALLRM 319 (537)
T ss_dssp HHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHTSCCCC---------CCCCTT---CCSCCCCCSCCHHHHHHHHHHHHHH
T ss_pred HHHHHHhhcccCHHHHHHHHHHHHHHHHHHHhccccc---------ccCCcc---cccCCcCCCccchHHHHHHHHHHHH
Confidence 5566777776 688999999999988654311 111100 0112344444555577778889999
Q ss_pred cCCchHHHHHHHH
Q 002978 420 TKEMVYADYYERA 432 (861)
Q Consensus 420 tgD~~YaD~~ERa 432 (861)
|||.+|.++++..
T Consensus 320 Tgd~~Yl~~a~~~ 332 (537)
T 3gzk_A 320 TGDSAWARVCEPL 332 (537)
T ss_dssp HCCGGGHHHHHHH
T ss_pred hCCHHHHHHHHHh
Confidence 9999999999874
No 64
>1tf4_A T. fusca endo/EXO-cellulase E4 catalytic domain and cellulose-binding domain; glycosyl hydrolase, cellulose degradation; 1.90A {Thermobifida fusca} SCOP: a.102.1.2 b.2.2.2 PDB: 1js4_A 3tf4_A* 4tf4_A*
Probab=24.82 E-value=8.7e+02 Score=28.22 Aligned_cols=193 Identities=12% Similarity=0.105 Sum_probs=87.3
Q ss_pred hhHHHHHHHHHHHhcC--ChhHHHHHHHHHHHHHHHHhhcCCCccccCCcchhhhhhccCCcccccchhHHHHHHHHHHH
Q 002978 169 VGHYLSASAHMWASTH--NVTLKEKMTAVVSALSECQNKMGSGYLSAFPSEQFDRFEALKPVWAPYYTIHKILAGLLDQY 246 (861)
Q Consensus 169 ~Gh~LsAlA~~~a~t~--D~~L~~k~d~~Vd~L~~~Q~~~~dGYL~a~~~~~~~~~~~l~~~W~pyYt~HkI~aGLld~y 246 (861)
.|...-|||.+...-. |+++.+++-.-...+-+.-+++..-|-...+. -.-+ ..|.-| .--++.|+ +-.|
T Consensus 153 a~~~AAAlAaAS~vfk~~D~~yA~~~L~~Ak~~~~fA~~~~g~y~~~~~~--~~~Y----~s~s~~-~DEl~WAA-awLy 224 (605)
T 1tf4_A 153 AAETAAAMAASSIVFADDDPAYAATLVQHAKQLYTFADTYRGVYSDCVPA--GAFY----NSWSGY-QDELVWGA-YWLY 224 (605)
T ss_dssp HHHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHSCCCGGGTSTT--HHHH----CCSSCS-HHHHHHHH-HHHH
T ss_pred HHHHHHHHHHHHhhccccCHHHHHHHHHHHHHHHHHHHHcCCCcCCCCCc--cccc----cCCCCC-chHHHHHH-HHHH
Confidence 3455555555554443 77776665554444444434333334332220 0000 111111 12234555 4889
Q ss_pred HHcCChhHHHHHHHHHHHHHHHhhhcccccccccc-ccc-ccccccchHHHHHHHHHHcCCHHHHHHhhhcccccccc--
Q 002978 247 TFADNTQALKMTKWMVEYFYNRVQNVITKYSVERH-WNS-LNEETGGMNDVLYRLYTITQDPKHLLLAHLFDKPCFLG-- 322 (861)
Q Consensus 247 ~~tG~~~aL~va~~~ad~~~~r~~~~~~~~~~~~~-~~~-l~~E~GGmne~L~~LY~~TGd~ryL~lA~~F~~~~~~~-- 322 (861)
++||+++.|+-+....+ .+...... ..... |.. ...-..|. .+-|.++|++++|.+-|+.+.+...-.
T Consensus 225 ~ATgd~~Yl~~a~~~~~----~~~~~~~~-~~~~~~~~~~Wd~~~~g~---~~lla~~~~~~~y~~~a~~~~~~~~~~~~ 296 (605)
T 1tf4_A 225 KATGDDSYLAKAEYEYD----FLSTEQQT-DLRSYRWTIAWDDKSYGT---YVLLAKETGKQKYIDDANRWLDYWTVGVN 296 (605)
T ss_dssp HHHCCHHHHHHHHHHGG----GSCBCTTS-SCBCCSSCCSSSCCHHHH---HHHHHHHHCCHHHHHHHHHHHHHTTTCBT
T ss_pred HHhCCHHHHHHHHHHHH----hccccccc-ccccccccccccchHHHH---HHHHHhccChHHHHHHHHHHHHHHhcccC
Confidence 99999998887776332 11110000 00000 111 01111122 222456799999999998774321100
Q ss_pred hhcccCCCCCCC-cccCCccc--h--hHH-HHH-HHhcC----CcHHHHHHHHHHHHhhccc----eeeec
Q 002978 323 LLAVQADDISGF-HANTHIPV--V--IGS-QMR-YEVTG----DPLYKVTGTFFMDIVNASH----GYATG 378 (861)
Q Consensus 323 ~l~~~~D~l~g~-HanthiP~--~--~G~-a~~-Y~~TG----D~~y~~aa~~fwd~V~~~h----~yvTG 378 (861)
+....... .++ +-+.-.+. + .++ +.. +...+ +++|++.++.-.|-|..+. +|++|
T Consensus 297 ~~~~~~tp-~Gl~~~~~WGs~~~~~n~a~l~~~~a~~~~~~~~~~~y~~~A~~qidYiLG~Np~~~SyvvG 366 (605)
T 1tf4_A 297 GQRVPYSP-GGMAVLDTWGALRYAANTAFVALVYAKVIDDPVRKQRYHDFAVRQINYALGDNPRNSSYVVG 366 (605)
T ss_dssp TBCCCBCT-TSCBCCCSSSHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHTCSTTCCCSBTT
T ss_pred CCccccCC-CcceecCCccHHHHHHHHHHHHHHHHHhccccccHHHHHHHHHHHHHHhcCCCCCCcceEec
Confidence 00000000 000 00111111 1 111 122 33433 4789999999999886544 88887
No 65
>2nvh_A IL-1 beta, interleukin-1 beta, catabolin; water, hydration, protein folding, cytokine; 1.53A {Homo sapiens} SCOP: b.42.1.2 PDB: 1iob_A 1itb_A 2i1b_A 2kh2_A 1i1b_A 4i1b_A 5i1b_A 6i1b_A 7i1b_A 9ilb_A 4dep_A* 3o4o_A* 1twm_A 1twe_A 1s0l_A 1too_A 1t4q_A 41bi_A 21bi_A 1hib_A ...
Probab=23.07 E-value=36 Score=33.02 Aligned_cols=28 Identities=7% Similarity=0.191 Sum_probs=22.2
Q ss_pred ceEEEeccCCCCeeEEeccccCCCceEEEE
Q 002978 772 ETISLEAVNQNGCFVYSGVNFNSGASLKLS 801 (861)
Q Consensus 772 g~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 801 (861)
.+.+|||+.+||||+-.. ...++-|.+.
T Consensus 108 ~~~~fESaa~PgWFI~Ts--~~~~qPV~Lt 135 (153)
T 2nvh_A 108 NKLEFESAQFPNWYISTS--QAENMPVFLG 135 (153)
T ss_dssp TEEEEEESSSTTCEEEBC--SSTTEECEEE
T ss_pred CeeEEEeccCCCcEEecC--CCCCeEEEee
Confidence 589999999999999853 2246677776
No 66
>2wry_A IL-1 beta, interleukin-1BETA; immune system, pyrogen, mitogen, inflammatory response; 1.58A {Gallus gallus} PDB: 3nj5_A
Probab=22.99 E-value=36 Score=33.33 Aligned_cols=38 Identities=16% Similarity=0.338 Sum_probs=27.4
Q ss_pred ceEEEeecCCCCCceEEEeccCCCCeeEEeccccCCCceEEEE
Q 002978 759 SVFRLVAGLDGKDETISLEAVNQNGCFVYSGVNFNSGASLKLS 801 (861)
Q Consensus 759 s~f~~vpgl~g~~g~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 801 (861)
.-|+-..|. ..+.+|||+.+||||+-.. ...++-|.+.
T Consensus 109 lFyr~~~G~---~~~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 146 (162)
T 2wry_A 109 IFYRLDSPT---EGTTRFESAAFPGWFICTS--LQPRQPVGIT 146 (162)
T ss_dssp CEEEEEETT---TTEEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred EEEEecCCC---CCceEEEeccCCCcEEEcC--CCCCeEEEee
Confidence 345666664 2589999999999999853 2346677776
No 67
>1md6_A Interleukin 1 family, member 5 (delta); beta triple, alpha helix, immune system; 1.60A {Mus musculus} SCOP: b.42.1.2
Probab=22.70 E-value=34 Score=33.17 Aligned_cols=27 Identities=22% Similarity=0.385 Sum_probs=21.6
Q ss_pred eEEEeccCCCCeeEEeccccCCCceEEEE
Q 002978 773 TISLEAVNQNGCFVYSGVNFNSGASLKLS 801 (861)
Q Consensus 773 ~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 801 (861)
+.+|||+.+||||+-.. ...++-|.+.
T Consensus 107 ~~tfESaa~PgWFI~Ts--~~~~qPV~Lt 133 (154)
T 1md6_A 107 TSSFESAAYPGWFLCTS--PEADQPVRLT 133 (154)
T ss_dssp CEEEEESSSTTCEEEBC--SSSSEECEEE
T ss_pred eEEEEeccCCCcEEecC--CCCCeEEEee
Confidence 89999999999999852 2346677776
No 68
>2ila_A Interleukin-1 alpha; cytokine; 2.30A {Homo sapiens} SCOP: b.42.1.2 PDB: 2kki_A 2l5x_A
Probab=22.38 E-value=33 Score=33.33 Aligned_cols=26 Identities=12% Similarity=0.094 Sum_probs=21.3
Q ss_pred ceEEEeccCCCCeeEEeccccCCCceEEEE
Q 002978 772 ETISLEAVNQNGCFVYSGVNFNSGASLKLS 801 (861)
Q Consensus 772 g~vsle~~~~pg~~~~~~~~~~~g~~~~~~ 801 (861)
.+.+|||+..||||+-. + .++.|.+.
T Consensus 114 ~~~~FESaa~PgWFI~T-s---~~qPV~Lt 139 (155)
T 2ila_A 114 TKNYFTSVAHPNLFIAT-K---QDYWVCLA 139 (155)
T ss_pred CeeEEEeccCCCcEEEc-C---CCCCeEee
Confidence 58999999999999986 2 26677776
No 69
>1dm9_A Hypothetical 15.5 KD protein in MRCA-PCKA intergenic region; heat shock proteins, protein-RNA interactions, ribosome, structural genomics; 2.00A {Escherichia coli} SCOP: d.66.1.3 PDB: 3bbu_A
Probab=21.76 E-value=1e+02 Score=28.81 Aligned_cols=34 Identities=26% Similarity=0.201 Sum_probs=23.8
Q ss_pred EEEECCeeccCCCCCCEEEEEeeeCCCCEEEEEecceeEEEec
Q 002978 569 KATLNGQSLSLPAPGNFISVTQRWSSTDKLTIQLPINLRTEAI 611 (861)
Q Consensus 569 ~v~VNG~~v~~~~~ggY~~I~R~Wk~GD~V~L~LPm~lr~~~~ 611 (861)
.|+|||+.++.. +. -+.||+|+|.++-..+.+.+
T Consensus 35 ~V~VNG~~vk~s----~~-----V~~GD~I~I~~~~~~~~~~v 68 (133)
T 1dm9_A 35 KVHYNGQRSKPS----KI-----VELNATLTLRQGNDERTVIV 68 (133)
T ss_dssp CEEETTEECCTT----CB-----CCTTCEEEEEETTEEEEEEE
T ss_pred cEEECCEEcCCC----CE-----eCCCCEEEEEeCCceeeEEE
Confidence 689999976321 21 26799999999876665544
No 70
>2gjh_A Designed protein; obligate symmetric HOMO-dimer, de novo protein; NMR {}
Probab=20.68 E-value=26 Score=27.52 Aligned_cols=20 Identities=15% Similarity=0.390 Sum_probs=16.0
Q ss_pred CCCEEEEEeeeCCCCEEEEEe
Q 002978 582 PGNFISVTQRWSSTDKLTIQL 602 (861)
Q Consensus 582 ~ggY~~I~R~Wk~GD~V~L~L 602 (861)
+-||-.|..+| +||+|+++=
T Consensus 29 elgyndinvtw-dgdtvtveg 48 (62)
T 2gjh_A 29 ELGYNDINVTW-DGDTVTVEG 48 (62)
T ss_dssp HTTCCSCEEEE-CSSCEEEEE
T ss_pred HhCcccceeEE-cCCEEEEEe
Confidence 45788999999 789988763
Done!