Query 002979
Match_columns 861
No_of_seqs 674 out of 4014
Neff 7.7
Searched_HMMs 46136
Date Thu Mar 28 14:37:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/002979.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/002979hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02205 alpha,alpha-trehalose 100.0 1E-191 2E-196 1712.5 90.4 846 1-846 1-851 (854)
2 PLN03064 alpha,alpha-trehalose 100.0 2E-158 4E-163 1413.2 82.3 747 58-845 93-932 (934)
3 PLN03063 alpha,alpha-trehalose 100.0 2E-150 4E-155 1357.8 83.9 749 56-846 8-790 (797)
4 PRK14501 putative bifunctional 100.0 2E-141 4E-146 1284.1 84.6 720 59-841 1-725 (726)
5 KOG1050 Trehalose-6-phosphate 100.0 1E-131 2E-136 1155.6 60.5 728 58-837 2-731 (732)
6 PRK10117 trehalose-6-phosphate 100.0 1E-121 2E-126 1029.5 48.9 455 59-549 2-456 (474)
7 TIGR02398 gluc_glyc_Psyn gluco 100.0 1E-119 2E-124 1025.2 48.2 462 64-546 1-482 (487)
8 PF00982 Glyco_transf_20: Glyc 100.0 2E-120 5E-125 1033.8 29.1 467 60-546 2-474 (474)
9 COG0380 OtsA Trehalose-6-phosp 100.0 1E-114 2E-119 966.2 43.7 466 55-547 11-480 (486)
10 TIGR02400 trehalose_OtsA alpha 100.0 7E-108 2E-112 935.5 49.1 454 60-545 1-455 (456)
11 cd03788 GT1_TPS Trehalose-6-Ph 100.0 4.8E-98 1E-102 861.2 52.4 459 60-544 1-459 (460)
12 TIGR02468 sucrsPsyn_pln sucros 100.0 8.8E-34 1.9E-38 341.2 40.3 540 200-795 312-994 (1050)
13 COG1877 OtsB Trehalose-6-phosp 100.0 9.5E-32 2.1E-36 282.0 22.9 249 578-844 5-256 (266)
14 TIGR00685 T6PP trehalose-phosp 100.0 4.4E-31 9.4E-36 280.2 25.9 237 589-840 1-243 (244)
15 PF02358 Trehalose_PPase: Treh 100.0 4E-32 8.7E-37 286.7 16.7 227 595-830 1-235 (235)
16 PRK10187 trehalose-6-phosphate 100.0 7.7E-31 1.7E-35 281.1 26.5 232 591-845 14-249 (266)
17 PLN03017 trehalose-phosphatase 100.0 2.1E-30 4.6E-35 282.2 27.5 245 585-845 105-364 (366)
18 PLN02580 trehalose-phosphatase 100.0 3.6E-30 7.9E-35 283.0 27.1 243 584-845 112-382 (384)
19 PLN02151 trehalose-phosphatase 100.0 5.5E-30 1.2E-34 278.3 27.2 243 587-845 94-350 (354)
20 COG0561 Cof Predicted hydrolas 99.9 1.1E-25 2.3E-30 242.1 22.7 225 590-841 2-262 (264)
21 PRK15126 thiamin pyrimidine py 99.9 1.6E-25 3.5E-30 241.8 23.2 225 590-841 1-263 (272)
22 PRK10976 putative hydrolase; P 99.9 1.8E-25 4E-30 240.5 20.5 224 590-840 1-264 (266)
23 PRK10513 sugar phosphate phosp 99.9 4.1E-25 8.9E-30 238.3 22.8 224 590-840 2-268 (270)
24 PRK03669 mannosyl-3-phosphogly 99.9 5.9E-24 1.3E-28 229.4 22.9 225 590-842 6-270 (271)
25 cd03792 GT1_Trehalose_phosphor 99.9 4.5E-24 9.8E-29 240.8 22.6 301 174-546 63-371 (372)
26 PRK01158 phosphoglycolate phos 99.9 6.3E-24 1.4E-28 223.4 21.9 215 590-840 2-229 (230)
27 PLN02887 hydrolase family prot 99.9 5.9E-24 1.3E-28 247.3 23.4 231 582-840 300-579 (580)
28 PF08282 Hydrolase_3: haloacid 99.9 1.4E-23 3E-28 222.4 20.6 216 594-836 1-254 (254)
29 TIGR01484 HAD-SF-IIB HAD-super 99.9 1.5E-23 3.2E-28 216.5 16.3 195 593-798 1-201 (204)
30 PRK10530 pyridoxal phosphate ( 99.9 7.1E-23 1.5E-27 221.0 21.5 224 590-840 2-271 (272)
31 PRK15484 lipopolysaccharide 1, 99.9 3.3E-22 7.1E-27 226.4 27.8 269 199-546 100-377 (380)
32 PLN02939 transferase, transfer 99.9 6E-22 1.3E-26 235.9 29.2 319 176-548 589-968 (977)
33 PLN02316 synthase/transferase 99.9 7.5E-22 1.6E-26 239.3 28.7 310 175-548 687-1035(1036)
34 TIGR02472 sucr_P_syn_N sucrose 99.9 5.1E-22 1.1E-26 229.2 24.7 316 176-544 93-438 (439)
35 TIGR00099 Cof-subfamily Cof su 99.9 2.1E-22 4.5E-27 215.5 19.8 216 593-835 1-255 (256)
36 PRK00654 glgA glycogen synthas 99.9 8.2E-22 1.8E-26 229.0 25.5 293 200-547 120-463 (466)
37 TIGR01482 SPP-subfamily Sucros 99.9 2E-22 4.4E-27 211.2 17.8 210 594-839 1-224 (225)
38 TIGR01487 SPP-like sucrose-pho 99.9 4.2E-22 9.1E-27 207.5 19.3 207 591-836 1-215 (215)
39 PRK14098 glycogen synthase; Pr 99.9 6.8E-22 1.5E-26 229.9 23.2 319 175-547 119-486 (489)
40 TIGR02095 glgA glycogen/starch 99.9 1.7E-21 3.6E-26 227.1 24.6 310 179-545 110-471 (473)
41 cd03818 GT1_ExpC_like This fam 99.9 1.5E-21 3.2E-26 222.3 23.3 300 179-541 70-395 (396)
42 TIGR01486 HAD-SF-IIB-MPGP mann 99.9 1.4E-21 3.1E-26 209.1 21.1 220 593-839 1-255 (256)
43 TIGR03449 mycothiol_MshA UDP-N 99.9 1.1E-20 2.3E-25 215.7 29.3 286 200-547 103-402 (405)
44 TIGR01485 SPP_plant-cyano sucr 99.9 1E-21 2.3E-26 209.2 19.2 217 592-839 2-246 (249)
45 cd03796 GT1_PIG-A_like This fa 99.9 4.1E-21 8.9E-26 218.9 24.6 282 192-549 84-370 (398)
46 PRK00192 mannosyl-3-phosphogly 99.9 3.3E-21 7.2E-26 208.2 22.6 225 589-841 2-271 (273)
47 PRK15427 colanic acid biosynth 99.9 5.1E-21 1.1E-25 218.3 25.1 273 200-545 120-404 (406)
48 PRK14099 glycogen synthase; Pr 99.9 9.8E-21 2.1E-25 220.0 27.1 298 195-549 132-481 (485)
49 PTZ00174 phosphomannomutase; P 99.9 6.3E-21 1.4E-25 202.8 21.0 198 589-797 3-225 (247)
50 PLN02871 UDP-sulfoquinovose:DA 99.9 1.2E-20 2.6E-25 219.4 24.9 285 191-551 139-439 (465)
51 TIGR02471 sucr_syn_bact_C sucr 99.9 9.5E-21 2.1E-25 200.2 19.8 214 593-839 1-234 (236)
52 TIGR03088 stp2 sugar transfera 99.9 7.4E-20 1.6E-24 206.4 26.0 207 297-546 160-372 (374)
53 TIGR02463 MPGP_rel mannosyl-3- 99.9 1.8E-20 3.9E-25 196.1 18.2 196 593-798 1-217 (221)
54 cd03800 GT1_Sucrose_synthase T 99.8 1.3E-19 2.9E-24 205.0 26.7 286 196-541 101-397 (398)
55 cd03791 GT1_Glycogen_synthase_ 99.8 6.5E-20 1.4E-24 213.9 24.8 309 178-543 110-473 (476)
56 cd04951 GT1_WbdM_like This fam 99.8 1.6E-19 3.4E-24 201.2 25.5 281 190-544 73-358 (360)
57 TIGR02149 glgA_Coryne glycogen 99.8 2.2E-19 4.9E-24 203.2 26.2 285 199-547 84-387 (388)
58 cd03806 GT1_ALG11_like This fa 99.8 1.4E-19 2.9E-24 207.5 23.8 273 195-534 106-414 (419)
59 PLN00142 sucrose synthase 99.8 2.8E-19 6E-24 212.7 27.0 331 174-544 384-768 (815)
60 TIGR02470 sucr_synth sucrose s 99.8 7.4E-19 1.6E-23 209.1 30.3 334 174-544 361-745 (784)
61 cd05844 GT1_like_7 Glycosyltra 99.8 3E-19 6.5E-24 200.2 24.5 274 191-541 77-365 (367)
62 PLN02382 probable sucrose-phos 99.8 1.5E-19 3.3E-24 204.7 21.5 225 588-842 6-262 (413)
63 cd03813 GT1_like_3 This family 99.8 2E-19 4.3E-24 209.6 22.4 300 171-542 148-472 (475)
64 PLN02423 phosphomannomutase 99.8 4.2E-19 9.2E-24 188.2 22.6 211 590-840 6-244 (245)
65 cd03812 GT1_CapH_like This fam 99.8 4.2E-19 9.2E-24 197.9 23.7 266 191-526 75-345 (358)
66 PLN02949 transferase, transfer 99.8 1.2E-18 2.6E-23 200.9 27.0 314 149-548 109-458 (463)
67 cd04962 GT1_like_5 This family 99.8 1.5E-18 3.3E-23 194.7 27.2 286 184-545 73-369 (371)
68 cd03819 GT1_WavL_like This fam 99.8 5.8E-19 1.3E-23 196.6 22.9 269 192-531 74-349 (355)
69 cd03805 GT1_ALG2_like This fam 99.8 1.7E-18 3.6E-23 196.4 24.6 281 199-539 95-391 (392)
70 PRK14502 bifunctional mannosyl 99.8 7.8E-19 1.7E-23 203.2 21.9 199 589-797 414-652 (694)
71 cd03809 GT1_mtfB_like This fam 99.8 1.5E-18 3.3E-23 192.8 23.2 275 195-541 84-364 (365)
72 PRK15490 Vi polysaccharide bio 99.8 1.2E-18 2.7E-23 198.8 22.1 292 191-545 275-574 (578)
73 PRK15179 Vi polysaccharide bio 99.8 7.5E-19 1.6E-23 209.4 20.6 281 192-542 396-689 (694)
74 PRK10307 putative glycosyl tra 99.8 8.9E-18 1.9E-22 192.3 27.5 282 200-548 108-409 (412)
75 TIGR02918 accessory Sec system 99.8 6.8E-18 1.5E-22 196.4 26.0 271 198-545 211-498 (500)
76 cd03799 GT1_amsK_like This is 99.8 7.1E-18 1.5E-22 187.5 24.8 268 193-538 76-353 (355)
77 cd03821 GT1_Bme6_like This fam 99.8 4.2E-18 9.2E-23 188.8 22.9 274 200-541 89-374 (375)
78 cd04946 GT1_AmsK_like This fam 99.8 9.1E-18 2E-22 191.9 26.1 272 196-541 125-406 (407)
79 cd03801 GT1_YqgM_like This fam 99.8 7.5E-18 1.6E-22 185.3 24.3 286 191-544 80-373 (374)
80 cd03814 GT1_like_2 This family 99.8 7.3E-18 1.6E-22 187.1 23.7 274 193-544 80-363 (364)
81 TIGR02461 osmo_MPG_phos mannos 99.8 2.8E-18 6.1E-23 179.6 18.6 190 593-797 1-220 (225)
82 cd03822 GT1_ecORF704_like This 99.8 7.1E-18 1.5E-22 187.5 23.1 283 192-544 72-365 (366)
83 cd03817 GT1_UGDG_like This fam 99.8 6.7E-18 1.4E-22 187.4 22.8 268 191-532 79-362 (374)
84 cd03798 GT1_wlbH_like This fam 99.8 1.2E-17 2.6E-22 184.5 23.6 282 194-545 91-375 (377)
85 PRK10125 putative glycosyl tra 99.8 4.6E-18 9.9E-23 193.7 20.5 185 298-544 213-402 (405)
86 cd03807 GT1_WbnK_like This fam 99.8 2.2E-17 4.7E-22 182.4 24.6 282 192-543 76-363 (365)
87 cd03794 GT1_wbuB_like This fam 99.8 2.1E-17 4.5E-22 184.0 24.2 278 194-540 97-393 (394)
88 cd03793 GT1_Glycogen_synthase_ 99.8 8.1E-17 1.7E-21 184.0 27.5 352 151-545 105-585 (590)
89 PHA01633 putative glycosyl tra 99.8 3.8E-18 8.2E-23 187.2 15.6 193 302-541 118-334 (335)
90 cd03820 GT1_amsD_like This fam 99.8 1.8E-17 3.9E-22 181.5 21.0 264 193-541 80-347 (348)
91 cd04949 GT1_gtfA_like This fam 99.8 1.9E-17 4.2E-22 186.4 21.2 280 180-538 83-370 (372)
92 cd03823 GT1_ExpE7_like This fa 99.8 5.1E-17 1.1E-21 179.7 23.5 262 189-541 89-354 (359)
93 PRK12702 mannosyl-3-phosphogly 99.8 1.9E-17 4E-22 174.5 18.4 191 591-798 1-248 (302)
94 PRK09922 UDP-D-galactose:(gluc 99.8 2.9E-17 6.3E-22 184.6 20.1 240 190-514 78-326 (359)
95 PLN02846 digalactosyldiacylgly 99.7 3E-17 6.5E-22 186.9 18.7 268 191-545 111-390 (462)
96 cd03808 GT1_cap1E_like This fa 99.7 1.3E-16 2.9E-21 175.4 21.6 278 191-541 75-358 (359)
97 PF05116 S6PP: Sucrose-6F-phos 99.7 1.9E-17 4.2E-22 175.7 13.0 194 591-819 2-210 (247)
98 cd03816 GT1_ALG1_like This fam 99.7 3.2E-16 7E-21 179.6 23.7 271 200-541 97-408 (415)
99 PLN02501 digalactosyldiacylgly 99.7 8.1E-17 1.7E-21 185.5 18.3 316 135-544 379-707 (794)
100 cd03795 GT1_like_4 This family 99.7 4.5E-16 9.8E-21 173.1 22.3 263 194-530 81-349 (357)
101 TIGR03087 stp1 sugar transfera 99.7 1.2E-15 2.7E-20 173.8 24.0 189 298-544 197-394 (397)
102 cd03811 GT1_WabH_like This fam 99.7 5.3E-16 1.1E-20 170.0 19.5 249 193-512 78-329 (353)
103 PHA01630 putative group 1 glyc 99.7 3.9E-16 8.5E-21 172.9 18.4 186 298-545 119-329 (331)
104 cd03804 GT1_wbaZ_like This fam 99.7 6.8E-16 1.5E-20 172.6 20.1 224 199-514 84-328 (351)
105 cd03802 GT1_AviGT4_like This f 99.7 1.6E-15 3.5E-20 167.5 21.9 246 191-542 82-332 (335)
106 cd04955 GT1_like_6 This family 99.7 1.9E-15 4.1E-20 168.7 21.4 266 200-543 86-361 (363)
107 cd03825 GT1_wcfI_like This fam 99.7 1.7E-15 3.7E-20 169.0 19.8 194 297-545 159-363 (365)
108 PRK05749 3-deoxy-D-manno-octul 99.7 1E-14 2.2E-19 167.8 25.0 285 187-545 115-418 (425)
109 PLN02275 transferase, transfer 99.6 1.5E-14 3.3E-19 163.3 21.7 239 195-510 99-371 (371)
110 COG0297 GlgA Glycogen synthase 99.6 2.5E-14 5.4E-19 163.2 22.9 292 200-546 132-477 (487)
111 PF00534 Glycos_transf_1: Glyc 99.6 7.2E-15 1.6E-19 146.9 10.1 143 332-513 13-159 (172)
112 cd04950 GT1_like_1 Glycosyltra 99.5 8.3E-13 1.8E-17 149.3 21.4 267 195-546 99-371 (373)
113 COG3769 Predicted hydrolase (H 99.4 8.4E-13 1.8E-17 130.6 13.4 203 589-797 5-230 (274)
114 KOG1111 N-acetylglucosaminyltr 99.4 2.1E-13 4.7E-18 144.2 9.0 201 273-525 146-351 (426)
115 PLN02605 monogalactosyldiacylg 99.3 7.2E-11 1.6E-15 134.0 22.6 190 298-541 174-376 (382)
116 KOG0853 Glycosyltransferase [C 99.2 3.3E-10 7.1E-15 127.9 17.8 186 334-550 273-467 (495)
117 cd01635 Glycosyltransferase_GT 99.2 1.7E-10 3.8E-15 118.9 14.4 111 339-488 109-220 (229)
118 COG0438 RfaG Glycosyltransfera 99.1 7.6E-10 1.7E-14 120.1 16.5 197 298-546 173-376 (381)
119 PRK13609 diacylglycerol glucos 99.1 7.7E-09 1.7E-13 117.3 23.8 274 180-547 88-372 (380)
120 TIGR00236 wecB UDP-N-acetylglu 99.1 4.5E-09 9.8E-14 118.5 21.8 251 185-512 76-334 (365)
121 cd03785 GT1_MurG MurG is an N- 99.1 4.3E-09 9.2E-14 117.6 20.2 248 188-535 81-346 (350)
122 PRK00726 murG undecaprenyldiph 99.1 3.8E-09 8.3E-14 118.6 19.3 257 190-544 85-355 (357)
123 TIGR01670 YrbI-phosphatas 3-de 99.0 1.1E-09 2.5E-14 107.8 9.7 70 757-843 76-152 (154)
124 PRK09484 3-deoxy-D-manno-octul 99.0 8.9E-10 1.9E-14 111.8 8.9 124 589-827 19-153 (183)
125 TIGR01133 murG undecaprenyldip 99.0 1.3E-08 2.8E-13 113.6 19.0 180 300-538 153-346 (348)
126 cd03786 GT1_UDP-GlcNAc_2-Epime 99.0 2.6E-08 5.7E-13 111.9 21.4 251 183-514 76-339 (363)
127 PRK13608 diacylglycerol glucos 99.0 3.9E-08 8.5E-13 112.0 22.2 272 187-551 95-376 (391)
128 PRK11133 serB phosphoserine ph 98.9 5.8E-08 1.3E-12 106.8 16.8 65 756-837 247-316 (322)
129 KOG3189 Phosphomannomutase [Li 98.8 6.8E-08 1.5E-12 94.7 13.6 200 585-795 5-229 (252)
130 cd01427 HAD_like Haloacid deha 98.8 1.7E-08 3.7E-13 95.6 9.0 55 593-648 1-60 (139)
131 PF13692 Glyco_trans_1_4: Glyc 98.8 8.8E-09 1.9E-13 98.5 6.1 128 334-511 2-134 (135)
132 TIGR02726 phenyl_P_delta pheny 98.8 2.8E-08 6E-13 99.1 9.4 138 591-843 7-158 (169)
133 PRK00025 lpxB lipid-A-disaccha 98.7 3.3E-07 7.2E-12 103.8 18.7 139 327-513 176-342 (380)
134 PRK09814 beta-1,6-galactofuran 98.7 2.5E-07 5.4E-12 103.1 16.6 249 191-539 58-324 (333)
135 PF03332 PMM: Eukaryotic phosp 98.7 1.1E-07 2.3E-12 96.6 12.2 193 616-840 1-219 (220)
136 TIGR02094 more_P_ylases alpha- 98.7 2.8E-06 6.2E-11 100.9 25.9 180 333-543 388-597 (601)
137 COG0546 Gph Predicted phosphat 98.7 9.2E-08 2E-12 100.1 11.1 84 737-838 130-219 (220)
138 TIGR03713 acc_sec_asp1 accesso 98.7 8.2E-07 1.8E-11 104.0 19.9 272 180-532 203-507 (519)
139 KOG1387 Glycosyltransferase [C 98.7 3.5E-07 7.7E-12 96.9 14.8 181 333-546 268-458 (465)
140 PRK13226 phosphoglycolate phos 98.6 1.8E-08 3.8E-13 106.2 4.2 67 758-838 153-226 (229)
141 PRK13225 phosphoglycolate phos 98.6 4.7E-07 1E-11 97.7 14.7 71 757-841 196-272 (273)
142 COG1778 Low specificity phosph 98.6 7.1E-08 1.5E-12 91.7 7.0 68 757-841 83-157 (170)
143 PRK10444 UMP phosphatase; Prov 98.6 8E-07 1.7E-11 94.6 15.6 59 591-654 1-59 (248)
144 TIGR01458 HAD-SF-IIA-hyp3 HAD- 98.6 1E-06 2.2E-11 94.5 15.9 65 758-836 181-254 (257)
145 COG0560 SerB Phosphoserine pho 98.6 3.2E-07 6.9E-12 95.2 10.8 58 754-828 141-201 (212)
146 PRK13288 pyrophosphatase PpaX; 98.5 1E-07 2.2E-12 99.2 6.2 70 755-838 137-212 (214)
147 PRK13223 phosphoglycolate phos 98.5 1.9E-07 4E-12 101.0 8.0 71 753-837 154-230 (272)
148 TIGR00338 serB phosphoserine p 98.5 8.1E-07 1.7E-11 92.7 11.5 62 757-835 152-218 (219)
149 PRK13222 phosphoglycolate phos 98.5 1.3E-07 2.7E-12 99.1 4.4 67 758-838 151-223 (226)
150 TIGR01452 PGP_euk phosphoglyco 98.4 3.3E-06 7.2E-11 91.7 14.6 59 591-654 2-60 (279)
151 cd04299 GT1_Glycogen_Phosphory 98.4 2.6E-05 5.6E-10 94.5 23.2 181 335-546 479-689 (778)
152 TIGR01454 AHBA_synth_RP 3-amin 98.4 1.6E-06 3.5E-11 89.5 11.2 66 758-837 133-204 (205)
153 TIGR01449 PGP_bact 2-phosphogl 98.4 1.3E-07 2.8E-12 98.1 2.9 64 758-835 143-212 (213)
154 TIGR01491 HAD-SF-IB-PSPlk HAD- 98.4 3.3E-06 7.2E-11 86.5 12.6 38 757-797 147-184 (201)
155 PLN02954 phosphoserine phospha 98.4 4.7E-06 1E-10 87.3 13.8 66 754-836 152-223 (224)
156 TIGR01457 HAD-SF-IIA-hyp2 HAD- 98.4 3.4E-06 7.4E-11 90.0 12.9 54 591-649 1-57 (249)
157 smart00775 LNS2 LNS2 domain. T 98.4 6.4E-07 1.4E-11 88.5 6.3 52 593-648 1-66 (157)
158 PLN02645 phosphoglycolate phos 98.3 7.4E-06 1.6E-10 90.4 14.2 60 590-654 27-86 (311)
159 PLN02770 haloacid dehalogenase 98.3 1.6E-06 3.6E-11 92.4 8.6 60 758-831 166-230 (248)
160 PF05693 Glycogen_syn: Glycoge 98.3 1.6E-05 3.5E-10 91.6 16.7 101 422-541 461-576 (633)
161 PRK13478 phosphonoacetaldehyde 98.3 1.2E-05 2.6E-10 86.8 14.8 72 758-843 160-261 (267)
162 PRK06769 hypothetical protein; 98.3 4.1E-06 8.8E-11 84.3 9.8 65 758-836 95-171 (173)
163 TIGR01488 HAD-SF-IB Haloacid D 98.2 3.5E-06 7.6E-11 84.6 8.8 41 752-795 137-177 (177)
164 PRK08942 D,D-heptose 1,7-bisph 98.2 8.6E-06 1.9E-10 82.5 10.9 66 758-837 105-177 (181)
165 TIGR01422 phosphonatase phosph 98.2 7.3E-06 1.6E-10 87.6 10.8 65 758-836 158-252 (253)
166 TIGR03351 PhnX-like phosphonat 98.2 7.3E-06 1.6E-10 85.5 10.5 65 758-836 147-219 (220)
167 PRK11587 putative phosphatase; 98.2 7.7E-06 1.7E-10 85.4 9.7 61 758-832 140-203 (218)
168 PRK10826 2-deoxyglucose-6-phos 98.1 5E-06 1.1E-10 87.0 7.7 63 757-833 149-216 (222)
169 TIGR00215 lpxB lipid-A-disacch 98.1 9.8E-05 2.1E-09 84.0 18.4 134 333-513 190-348 (385)
170 COG1519 KdtA 3-deoxy-D-manno-o 98.1 0.001 2.2E-08 74.0 25.3 300 181-531 32-404 (419)
171 TIGR00213 GmhB_yaeD D,D-heptos 98.1 2.3E-05 5E-10 79.0 11.5 63 758-833 108-175 (176)
172 PLN03243 haloacid dehalogenase 98.1 1.4E-05 3.1E-10 85.7 9.9 73 758-845 167-244 (260)
173 PLN02779 haloacid dehalogenase 98.1 5.2E-06 1.1E-10 90.4 6.4 61 758-832 204-268 (286)
174 PLN02575 haloacid dehalogenase 98.0 1.2E-05 2.7E-10 89.7 8.7 89 738-844 258-350 (381)
175 TIGR01662 HAD-SF-IIIA HAD-supe 98.0 2.2E-05 4.7E-10 75.1 8.5 46 592-638 1-51 (132)
176 TIGR02253 CTE7 HAD superfamily 98.0 1.4E-05 3E-10 83.5 7.7 61 758-832 152-220 (221)
177 PRK13582 thrH phosphoserine ph 98.0 4.4E-05 9.5E-10 78.7 11.0 54 774-841 142-200 (205)
178 TIGR01689 EcbF-BcbF capsule bi 98.0 9.5E-06 2.1E-10 76.6 5.4 51 592-643 2-55 (126)
179 PRK09552 mtnX 2-hydroxy-3-keto 98.0 0.00012 2.5E-09 76.6 14.0 65 756-841 147-217 (219)
180 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.0 3E-05 6.6E-10 79.7 9.3 42 754-798 152-193 (202)
181 TIGR02137 HSK-PSP phosphoserin 97.9 7.3E-05 1.6E-09 77.2 11.4 64 755-839 130-198 (203)
182 PRK06698 bifunctional 5'-methy 97.9 3E-05 6.5E-10 90.3 9.0 67 757-839 386-456 (459)
183 PF13524 Glyco_trans_1_2: Glyc 97.9 1.6E-05 3.4E-10 71.0 5.0 87 433-541 1-91 (92)
184 PHA02597 30.2 hypothetical pro 97.9 6.3E-05 1.4E-09 77.1 10.0 60 758-833 132-195 (197)
185 TIGR01672 AphA HAD superfamily 97.9 0.00012 2.7E-09 77.0 11.8 30 576-605 48-77 (237)
186 PRK14988 GMP/IMP nucleotidase; 97.8 9.1E-05 2E-09 77.8 10.4 69 758-839 151-221 (224)
187 TIGR01681 HAD-SF-IIIC HAD-supe 97.8 7.5E-05 1.6E-09 71.2 8.6 54 592-646 1-64 (128)
188 TIGR01684 viral_ppase viral ph 97.8 3.6E-05 7.8E-10 82.1 6.9 56 590-649 125-183 (301)
189 TIGR01656 Histidinol-ppas hist 97.7 0.00018 4E-09 70.2 9.7 37 758-797 103-139 (147)
190 TIGR01664 DNA-3'-Pase DNA 3'-p 97.7 0.00023 4.9E-09 71.1 10.1 48 590-638 12-68 (166)
191 PRK09449 dUMP phosphatase; Pro 97.6 4.4E-05 9.5E-10 79.9 4.7 66 758-837 152-223 (224)
192 PLN02940 riboflavin kinase 97.6 6.5E-05 1.4E-09 85.2 6.4 62 758-833 152-217 (382)
193 PHA02530 pseT polynucleotide k 97.6 0.00041 8.9E-09 76.1 12.0 56 591-647 158-222 (300)
194 TIGR02919 accessory Sec system 97.6 0.00039 8.4E-09 80.0 11.5 121 350-514 291-413 (438)
195 TIGR01261 hisB_Nterm histidino 97.6 0.00039 8.6E-09 69.0 10.1 37 758-797 105-141 (161)
196 PRK11590 hypothetical protein; 97.6 0.00042 9E-09 72.0 10.5 37 755-797 161-197 (211)
197 TIGR01668 YqeG_hyp_ppase HAD s 97.5 0.00092 2E-08 67.0 11.8 48 588-638 22-69 (170)
198 COG0647 NagD Predicted sugar p 97.4 0.0053 1.1E-07 65.7 16.3 48 590-642 7-54 (269)
199 TIGR01990 bPGM beta-phosphoglu 97.4 0.00019 4.2E-09 72.4 5.2 38 757-797 142-179 (185)
200 PHA03398 viral phosphatase sup 97.4 0.00026 5.7E-09 75.7 5.9 56 590-649 127-185 (303)
201 TIGR03333 salvage_mtnX 2-hydro 97.3 0.0027 5.9E-08 66.1 13.2 65 755-840 142-212 (214)
202 PRK11009 aphA acid phosphatase 97.3 0.0022 4.8E-08 67.6 12.5 28 577-604 49-76 (237)
203 PRK10725 fructose-1-P/6-phosph 97.3 0.00021 4.5E-09 72.5 4.7 37 758-797 144-180 (188)
204 TIGR02009 PGMB-YQAB-SF beta-ph 97.3 6.1E-05 1.3E-09 76.1 0.6 37 758-797 144-180 (185)
205 TIGR02254 YjjG/YfnB HAD superf 97.3 0.0013 2.8E-08 68.5 10.7 66 758-836 154-224 (224)
206 TIGR01549 HAD-SF-IA-v1 haloaci 97.3 0.0003 6.6E-09 68.9 5.3 35 758-796 120-154 (154)
207 PRK10563 6-phosphogluconate ph 97.3 8.5E-05 1.8E-09 77.6 1.2 38 758-798 144-181 (221)
208 TIGR01489 DKMTPPase-SF 2,3-dik 97.2 0.0013 2.9E-08 66.4 9.4 40 752-797 144-183 (188)
209 TIGR01460 HAD-SF-IIA Haloacid 97.2 0.012 2.6E-07 62.3 15.8 50 594-648 1-53 (236)
210 TIGR01685 MDP-1 magnesium-depe 97.1 0.0022 4.8E-08 64.3 9.5 56 591-647 2-81 (174)
211 PLN02919 haloacid dehalogenase 97.1 0.0017 3.7E-08 82.8 10.6 61 758-832 220-285 (1057)
212 TIGR01525 ATPase-IB_hvy heavy 97.1 0.0017 3.7E-08 77.6 10.0 64 584-648 357-421 (556)
213 TIGR01459 HAD-SF-IIA-hyp4 HAD- 97.1 0.015 3.2E-07 61.8 15.6 47 590-641 7-53 (242)
214 PRK10671 copA copper exporting 97.0 0.003 6.6E-08 79.1 11.4 138 583-837 622-765 (834)
215 TIGR01545 YfhB_g-proteo haloac 97.0 0.0016 3.5E-08 67.6 7.4 37 755-797 160-196 (210)
216 PRK10748 flavin mononucleotide 97.0 0.0011 2.3E-08 70.4 6.2 37 758-797 165-202 (238)
217 PRK05446 imidazole glycerol-ph 97.0 0.0075 1.6E-07 67.3 12.9 39 757-798 105-143 (354)
218 TIGR02252 DREG-2 REG-2-like, H 96.9 0.00067 1.4E-08 69.8 3.9 37 758-797 162-199 (203)
219 TIGR01686 FkbH FkbH-like domai 96.9 0.0049 1.1E-07 68.4 10.6 115 590-797 2-124 (320)
220 TIGR01512 ATPase-IB2_Cd heavy 96.9 0.0033 7.1E-08 74.7 9.3 132 589-837 340-479 (536)
221 TIGR01497 kdpB K+-transporting 96.8 0.006 1.3E-07 73.5 10.6 140 581-837 416-561 (675)
222 PF06888 Put_Phosphatase: Puta 96.8 0.0081 1.8E-07 63.0 10.1 47 751-797 144-190 (234)
223 TIGR01548 HAD-SF-IA-hyp1 haloa 96.7 0.0012 2.7E-08 67.6 3.7 34 758-794 163-196 (197)
224 KOG3120 Predicted haloacid deh 96.7 0.0084 1.8E-07 60.8 9.4 49 747-795 153-202 (256)
225 PRK08238 hypothetical protein; 96.7 0.0076 1.7E-07 70.1 10.2 36 612-648 73-108 (479)
226 TIGR01511 ATPase-IB1_Cu copper 96.6 0.0077 1.7E-07 72.0 10.3 60 588-648 382-441 (562)
227 TIGR02247 HAD-1A3-hyp Epoxide 96.6 0.0061 1.3E-07 63.1 8.1 37 758-797 154-190 (211)
228 TIGR01522 ATPase-IIA2_Ca golgi 96.5 0.018 3.8E-07 72.7 12.9 165 583-837 495-671 (884)
229 COG1011 Predicted hydrolase (H 96.5 0.0033 7.1E-08 65.7 5.5 64 759-838 157-228 (229)
230 smart00577 CPDc catalytic doma 96.5 0.0055 1.2E-07 59.9 6.3 30 765-797 107-136 (148)
231 PF06437 ISN1: IMP-specific 5' 96.5 0.12 2.6E-06 56.9 16.8 203 577-790 133-388 (408)
232 TIGR01428 HAD_type_II 2-haloal 96.5 0.0069 1.5E-07 62.0 7.3 37 758-797 150-186 (198)
233 COG0637 Predicted phosphatase/ 96.4 0.0067 1.4E-07 63.5 6.9 50 741-797 131-180 (221)
234 COG2179 Predicted hydrolase of 96.4 0.011 2.3E-07 57.7 7.4 60 586-648 23-82 (175)
235 PF13344 Hydrolase_6: Haloacid 96.3 0.0013 2.8E-08 60.0 0.7 56 594-654 1-56 (101)
236 PRK11033 zntA zinc/cadmium/mer 96.3 0.017 3.7E-07 71.3 10.5 64 584-648 541-604 (741)
237 TIGR01993 Pyr-5-nucltdase pyri 96.3 0.0046 9.9E-08 62.6 4.6 37 758-797 143-179 (184)
238 PF00702 Hydrolase: haloacid d 96.2 0.011 2.3E-07 60.9 7.2 55 593-648 109-163 (215)
239 TIGR01456 CECR5 HAD-superfamil 96.2 0.3 6.5E-06 54.2 18.9 48 593-645 2-56 (321)
240 TIGR01116 ATPase-IIA1_Ca sarco 96.0 0.024 5.2E-07 71.7 10.3 40 608-648 534-573 (917)
241 PF13242 Hydrolase_like: HAD-h 95.9 0.015 3.3E-07 49.7 5.3 60 758-831 6-74 (75)
242 COG0241 HisB Histidinol phosph 95.8 0.098 2.1E-06 52.6 11.5 38 758-798 107-144 (181)
243 TIGR01663 PNK-3'Pase polynucle 95.8 0.034 7.4E-07 65.2 9.3 49 589-638 166-223 (526)
244 KOG1615 Phosphoserine phosphat 95.7 0.0026 5.6E-08 63.1 -0.2 71 749-833 151-222 (227)
245 TIGR01106 ATPase-IIC_X-K sodiu 95.7 0.11 2.4E-06 66.4 14.1 43 609-655 566-608 (997)
246 PRK01122 potassium-transportin 95.7 0.05 1.1E-06 65.8 10.4 67 582-649 416-482 (679)
247 COG4087 Soluble P-type ATPase 95.6 0.02 4.4E-07 53.3 5.1 54 773-839 90-149 (152)
248 PRK14010 potassium-transportin 95.6 0.06 1.3E-06 65.1 10.6 70 579-649 409-478 (673)
249 KOG0210 P-type ATPase [Inorgan 95.6 0.098 2.1E-06 61.1 11.5 175 610-839 657-835 (1051)
250 TIGR01517 ATPase-IIB_Ca plasma 95.5 0.091 2E-06 66.8 12.4 138 609-836 577-721 (941)
251 PTZ00445 p36-lilke protein; Pr 95.5 0.022 4.8E-07 58.1 5.5 158 578-797 30-199 (219)
252 TIGR01657 P-ATPase-V P-type AT 95.4 0.19 4.2E-06 64.6 15.1 46 609-658 654-699 (1054)
253 PF12710 HAD: haloacid dehalog 95.4 0.03 6.6E-07 56.6 6.3 34 614-648 92-125 (192)
254 TIGR01652 ATPase-Plipid phosph 95.3 0.078 1.7E-06 68.3 11.1 185 609-836 629-819 (1057)
255 TIGR01675 plant-AP plant acid 95.3 0.031 6.7E-07 58.4 5.9 56 590-646 76-157 (229)
256 TIGR01647 ATPase-IIIA_H plasma 95.0 0.21 4.6E-06 61.9 13.1 167 584-837 410-587 (755)
257 PRK10517 magnesium-transportin 94.8 0.22 4.7E-06 62.9 12.8 137 609-837 548-690 (902)
258 COG2217 ZntA Cation transport 94.8 0.15 3.3E-06 61.9 10.8 140 581-837 507-652 (713)
259 PLN03190 aminophospholipid tra 94.8 0.26 5.7E-06 63.6 13.5 40 609-649 724-763 (1178)
260 PF08645 PNK3P: Polynucleotide 94.8 0.013 2.8E-07 58.1 1.4 43 592-635 1-52 (159)
261 TIGR01524 ATPase-IIIB_Mg magne 94.7 0.25 5.3E-06 62.3 13.0 137 609-837 513-655 (867)
262 PF09419 PGP_phosphatase: Mito 94.6 0.04 8.7E-07 54.7 4.5 48 572-623 24-71 (168)
263 PF11019 DUF2608: Protein of u 94.5 1.1 2.3E-05 48.0 15.2 58 751-818 156-213 (252)
264 PRK15122 magnesium-transportin 94.5 0.37 8E-06 60.9 13.6 137 609-837 548-690 (903)
265 PF02684 LpxB: Lipid-A-disacch 94.4 2.1 4.5E-05 48.4 18.1 252 194-515 80-343 (373)
266 TIGR01494 ATPase_P-type ATPase 94.3 0.18 3.9E-06 59.5 10.0 59 590-649 326-384 (499)
267 TIGR01523 ATPase-IID_K-Na pota 94.3 0.19 4E-06 64.5 10.6 149 609-837 644-799 (1053)
268 PF08323 Glyco_transf_5: Starc 94.2 0.17 3.8E-06 53.8 8.7 85 186-271 118-232 (245)
269 TIGR01533 lipo_e_P4 5'-nucleot 94.2 0.044 9.5E-07 58.8 4.0 54 589-643 73-149 (266)
270 KOG3040 Predicted sugar phosph 94.1 0.54 1.2E-05 47.6 10.9 60 590-654 6-65 (262)
271 PF08235 LNS2: LNS2 (Lipin/Ned 93.9 0.084 1.8E-06 51.7 4.9 70 593-663 1-81 (157)
272 PF13439 Glyco_transf_4: Glyco 93.7 0.012 2.7E-07 57.7 -1.2 99 189-312 73-177 (177)
273 COG0474 MgtA Cation transport 93.7 0.34 7.3E-06 61.4 11.0 41 608-649 544-584 (917)
274 TIGR01680 Veg_Stor_Prot vegeta 93.6 0.1 2.2E-06 55.6 5.3 50 591-641 101-174 (275)
275 COG0763 LpxB Lipid A disacchar 92.9 4.3 9.4E-05 45.4 16.7 292 175-542 69-376 (381)
276 PF03767 Acid_phosphat_B: HAD 92.3 0.019 4.2E-07 60.4 -2.4 74 589-663 70-166 (229)
277 KOG2941 Beta-1,4-mannosyltrans 92.3 3.2 6.9E-05 45.5 14.1 168 333-543 254-435 (444)
278 TIGR03568 NeuC_NnaA UDP-N-acet 91.8 4.9 0.00011 45.4 16.1 73 411-511 262-338 (365)
279 TIGR03492 conserved hypothetic 91.6 1.2 2.6E-05 50.9 11.1 138 334-512 207-364 (396)
280 cd03784 GT1_Gtf_like This fami 91.2 9.2 0.0002 43.4 17.9 74 412-511 289-371 (401)
281 PF12689 Acid_PPase: Acid Phos 90.6 3.5 7.5E-05 41.2 11.7 47 746-797 99-145 (169)
282 KOG0202 Ca2+ transporting ATPa 90.0 1.5 3.3E-05 53.0 9.9 56 586-649 566-621 (972)
283 PF13844 Glyco_transf_41: Glyc 89.8 1.9 4.2E-05 49.9 10.4 101 332-453 283-383 (468)
284 COG0381 WecB UDP-N-acetylgluco 89.6 41 0.00088 38.0 20.9 137 334-515 205-344 (383)
285 PLN02811 hydrolase 88.4 0.72 1.6E-05 48.0 5.4 63 758-831 139-205 (220)
286 PF03031 NIF: NLI interacting 87.6 0.25 5.5E-06 48.6 1.3 57 592-650 1-73 (159)
287 PF02350 Epimerase_2: UDP-N-ac 87.2 56 0.0012 36.6 21.3 259 180-512 52-318 (346)
288 KOG0207 Cation transport ATPas 86.4 4.5 9.7E-05 49.6 10.9 68 579-647 691-758 (951)
289 TIGR02245 HAD_IIID1 HAD-superf 86.0 1.1 2.3E-05 45.9 4.9 58 589-648 19-80 (195)
290 COG4030 Uncharacterized protei 85.8 2.7 5.8E-05 43.2 7.4 37 758-798 192-228 (315)
291 KOG0206 P-type ATPase [General 85.6 3.6 7.9E-05 52.4 10.1 42 751-798 775-816 (1151)
292 PF05152 DUF705: Protein of un 85.6 2.2 4.8E-05 45.6 7.0 59 589-648 120-178 (297)
293 COG3882 FkbH Predicted enzyme 85.5 1.7 3.7E-05 49.5 6.4 71 578-649 209-292 (574)
294 KOG3109 Haloacid dehalogenase- 84.9 1.3 2.8E-05 45.5 4.6 76 747-842 155-233 (244)
295 KOG0208 Cation transport ATPas 84.5 1.7 3.8E-05 53.3 6.3 78 564-649 663-742 (1140)
296 TIGR01426 MGT glycosyltransfer 84.2 7.4 0.00016 44.2 11.3 97 413-537 277-383 (392)
297 TIGR02250 FCP1_euk FCP1-like p 84.1 1.6 3.5E-05 43.0 4.9 60 588-649 3-94 (156)
298 PF13579 Glyco_trans_4_4: Glyc 84.0 1.1 2.4E-05 42.8 3.8 67 200-271 75-146 (160)
299 TIGR02251 HIF-SF_euk Dullard-l 83.7 1.9 4E-05 42.8 5.3 56 591-648 1-77 (162)
300 PF13419 HAD_2: Haloacid dehal 81.1 2.2 4.8E-05 41.6 4.8 37 758-797 135-171 (176)
301 PF06941 NT5C: 5' nucleotidase 80.2 1.1 2.3E-05 45.7 2.2 28 612-640 74-101 (191)
302 TIGR01544 HAD-SF-IE haloacid d 79.7 1.7 3.6E-05 47.0 3.5 38 755-795 190-230 (277)
303 PF07429 Glyco_transf_56: 4-al 79.5 12 0.00026 41.4 10.0 140 334-509 185-330 (360)
304 COG0707 MurG UDP-N-acetylgluco 79.4 1.2E+02 0.0025 34.3 20.4 147 333-531 182-341 (357)
305 TIGR01509 HAD-SF-IA-v3 haloaci 78.1 2.9 6.4E-05 41.5 4.6 37 758-797 142-178 (183)
306 KOG0204 Calcium transporting A 76.2 13 0.00029 45.4 9.7 39 610-649 646-684 (1034)
307 PRK09456 ?-D-glucose-1-phospha 75.9 3.3 7E-05 42.3 4.3 37 758-797 143-179 (199)
308 COG0816 Predicted endonuclease 75.2 16 0.00034 35.4 8.3 72 352-433 41-112 (141)
309 TIGR03590 PseG pseudaminic aci 74.9 9.9 0.00021 41.2 7.9 93 333-456 170-262 (279)
310 COG4359 Uncharacterized conser 74.7 4.3 9.4E-05 40.6 4.4 38 753-797 143-180 (220)
311 COG3700 AphA Acid phosphatase 74.3 5.2 0.00011 39.6 4.8 68 577-644 49-146 (237)
312 PF06258 Mito_fiss_Elm1: Mitoc 73.4 16 0.00034 40.4 9.0 35 419-456 217-251 (311)
313 TIGR01691 enolase-ppase 2,3-di 72.0 8.1 0.00018 40.4 6.1 38 758-798 154-191 (220)
314 TIGR01493 HAD-SF-IA-v2 Haloaci 71.2 1.4 3.1E-05 43.7 0.3 34 758-794 141-174 (175)
315 KOG2914 Predicted haloacid-hal 70.6 11 0.00023 39.5 6.6 65 727-797 125-190 (222)
316 KOG0203 Na+/K+ ATPase, alpha s 70.1 18 0.00038 44.3 8.8 40 613-656 592-631 (1019)
317 KOG2116 Protein involved in pl 69.8 6 0.00013 46.7 4.9 77 590-667 529-616 (738)
318 COG4996 Predicted phosphatase 68.9 10 0.00022 35.9 5.2 55 592-647 1-76 (164)
319 KOG2884 26S proteasome regulat 68.7 62 0.0013 33.4 11.0 47 474-524 186-237 (259)
320 KOG2134 Polynucleotide kinase 68.1 4 8.7E-05 45.3 2.9 46 590-636 74-128 (422)
321 KOG3742 Glycogen synthase [Car 67.9 1E+02 0.0022 35.3 13.5 70 423-511 493-577 (692)
322 COG2503 Predicted secreted aci 64.5 5.5 0.00012 41.6 2.9 53 588-641 76-151 (274)
323 COG2179 Predicted hydrolase of 62.5 35 0.00075 33.9 7.8 97 697-817 29-139 (175)
324 TIGR01493 HAD-SF-IA-v2 Haloaci 61.3 6.9 0.00015 38.7 3.0 24 593-623 1-24 (175)
325 COG5083 SMP2 Uncharacterized p 59.0 8.9 0.00019 43.2 3.5 68 588-662 372-450 (580)
326 COG4087 Soluble P-type ATPase 58.8 7.4 0.00016 36.8 2.4 48 594-647 17-64 (152)
327 KOG2882 p-Nitrophenyl phosphat 58.5 8.6 0.00019 41.6 3.2 60 590-654 21-80 (306)
328 PRK14986 glycogen phosphorylas 58.2 1.6E+02 0.0035 36.7 14.2 136 333-488 542-681 (815)
329 KOG1618 Predicted phosphatase 57.4 8.7 0.00019 41.7 2.9 39 592-635 36-78 (389)
330 COG1168 MalY Bifunctional PLP- 54.4 1.8E+02 0.004 32.7 12.5 160 369-604 158-322 (388)
331 PF12000 Glyco_trans_4_3: Gkyc 52.6 1E+02 0.0023 30.8 9.6 49 177-229 43-95 (171)
332 PRK04128 1-(5-phosphoribosyl)- 51.6 37 0.00079 35.7 6.6 61 578-646 31-92 (228)
333 PF00702 Hydrolase: haloacid d 51.4 5.3 0.00012 40.7 0.2 35 759-796 181-215 (215)
334 KOG3085 Predicted hydrolase (H 51.1 15 0.00033 38.6 3.6 47 759-821 171-218 (237)
335 PLN02177 glycerol-3-phosphate 50.3 19 0.00042 42.4 4.6 34 758-798 177-210 (497)
336 TIGR01509 HAD-SF-IA-v3 haloaci 50.2 6.6 0.00014 38.9 0.7 12 593-604 1-12 (183)
337 PF00343 Phosphorylase: Carboh 49.4 2E+02 0.0042 35.5 12.8 135 333-488 443-582 (713)
338 PF13528 Glyco_trans_1_3: Glyc 48.3 2.6E+02 0.0057 30.2 13.1 82 332-456 191-272 (318)
339 cd04300 GT1_Glycogen_Phosphory 46.8 3.3E+02 0.0072 34.1 14.4 136 333-488 529-668 (797)
340 COG3914 Spy Predicted O-linked 46.3 47 0.001 39.2 6.7 100 335-453 431-530 (620)
341 PRK14089 ipid-A-disaccharide s 46.2 4.7E+02 0.01 29.3 17.3 86 335-456 170-256 (347)
342 PRK09456 ?-D-glucose-1-phospha 45.8 10 0.00022 38.6 1.3 13 592-604 1-13 (199)
343 PF12710 HAD: haloacid dehalog 43.2 11 0.00023 37.8 1.0 36 757-793 157-192 (192)
344 TIGR00250 RNAse_H_YqgF RNAse H 42.6 1.3E+02 0.0028 28.6 8.2 71 351-431 35-105 (130)
345 PRK00109 Holliday junction res 42.3 2.1E+02 0.0046 27.5 9.7 70 353-432 43-112 (138)
346 PF13477 Glyco_trans_4_2: Glyc 42.1 35 0.00077 32.0 4.4 40 189-230 67-107 (139)
347 PF09949 DUF2183: Uncharacteri 41.8 64 0.0014 29.3 5.6 35 350-388 49-83 (100)
348 PF04312 DUF460: Protein of un 40.7 29 0.00062 33.3 3.3 55 591-649 43-99 (138)
349 COG1819 Glycosyl transferases, 39.4 1.4E+02 0.0029 34.4 9.3 100 414-543 287-397 (406)
350 PRK05632 phosphate acetyltrans 39.0 1.1E+02 0.0024 37.7 9.0 179 415-647 230-419 (684)
351 PRK02797 4-alpha-L-fucosyltran 36.9 2.7E+02 0.0058 30.8 10.3 124 334-494 146-272 (322)
352 COG4641 Uncharacterized protei 34.4 89 0.0019 35.1 6.3 108 419-546 246-361 (373)
353 PHA03392 egt ecdysteroid UDP-g 34.4 3.5E+02 0.0077 32.0 11.9 78 412-512 347-432 (507)
354 PRK13587 1-(5-phosphoribosyl)- 33.3 1.1E+02 0.0023 32.4 6.6 61 578-646 32-95 (234)
355 COG0058 GlgP Glucan phosphoryl 33.1 1E+03 0.022 29.6 15.4 130 333-488 486-616 (750)
356 KOG4549 Magnesium-dependent ph 32.8 57 0.0012 30.8 3.8 55 591-646 18-79 (144)
357 KOG1050 Trehalose-6-phosphate 31.6 6.8 0.00015 48.0 -3.1 50 747-796 371-423 (732)
358 smart00775 LNS2 LNS2 domain. T 31.0 99 0.0021 30.4 5.5 40 757-798 102-141 (157)
359 COG3660 Predicted nucleoside-d 29.7 3.7E+02 0.008 29.0 9.5 51 200-267 72-122 (329)
360 KOG2670 Enolase [Carbohydrate 28.8 52 0.0011 35.9 3.2 41 136-186 272-312 (433)
361 PF04464 Glyphos_transf: CDP-G 27.9 4.6E+02 0.01 29.2 11.1 232 202-514 81-338 (369)
362 TIGR02093 P_ylase glycogen/sta 27.6 5.8E+02 0.013 32.0 12.2 136 333-488 526-665 (794)
363 PRK00748 1-(5-phosphoribosyl)- 27.3 1.4E+02 0.0029 31.2 6.2 62 577-646 30-93 (233)
364 PF09419 PGP_phosphatase: Mito 26.7 1.5E+02 0.0033 29.6 5.9 43 755-797 113-158 (168)
365 COG4359 Uncharacterized conser 26.5 50 0.0011 33.3 2.5 36 612-648 74-109 (220)
366 PRK14985 maltodextrin phosphor 25.1 4.3E+02 0.0093 33.1 10.5 136 333-488 528-667 (798)
367 KOG4626 O-linked N-acetylgluco 24.5 4.5E+02 0.0097 31.7 9.8 85 350-454 773-858 (966)
368 COG4822 CbiK Cobalamin biosynt 24.5 8.2E+02 0.018 25.5 15.7 155 233-433 33-193 (265)
369 KOG0331 ATP-dependent RNA heli 21.9 4.3E+02 0.0093 31.4 9.3 93 337-439 131-224 (519)
370 PLN02177 glycerol-3-phosphate 21.3 55 0.0012 38.7 2.0 16 591-606 22-37 (497)
371 PRK14024 phosphoribosyl isomer 20.0 2.2E+02 0.0048 30.1 6.1 61 578-647 33-95 (241)
372 PRK14057 epimerase; Provisiona 20.0 6.8E+02 0.015 26.8 9.6 65 370-438 157-222 (254)
No 1
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=100.00 E-value=1.2e-191 Score=1712.47 Aligned_cols=846 Identities=68% Similarity=1.149 Sum_probs=801.2
Q ss_pred CCccccchhhhhhcCCCCCCCCCCCCCcccccccccccCCCCCCCCCCCCCCC-CCCCCCcEEEEEcCCccceeecCCC-
Q 002979 1 MASRSCANFLDLASGGLLDIPQTPRTLPRVMTVPGIISDADGYDSNDGDSDAT-SSGSRERKIIVANMLPLHAKRDTET- 78 (861)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iivsnrlP~~~~~~~~~- 78 (861)
|+||||+|||||++|+++.++++.+++|++|++||+++++++++.++.+++.+ +..+.+|+||||||||+.+++++++
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~rliiVsnrlPv~~~~~~~g~ 80 (854)
T PLN02205 1 MVSRSYSNLLELASGESPSFGRMNRRIPRIMTVAGIMSDIDDDPSESVCSDPSSSSVPKDRIIIVANQLPIRAQRKSDGS 80 (854)
T ss_pred CcChhhccHHHhccCCcccccccccCCCceecCCCcccccccccccccccccccCCCCCCcEEEEEccCceEEEEcCCCC
Confidence 89999999999999999999999999999999999999999988888777766 5666789999999999999987654
Q ss_pred CcEEEEecCChhhHhhhccccC-CCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCChHHHHHHHhhccccccccc
Q 002979 79 GRWCFSLDEDLLLLHLKDGFSS-DTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPHDLQKKFYLGFCKQHLWPL 157 (861)
Q Consensus 79 ~~~~~~~~~~~l~~~l~~~~~~-~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~~~~~~~y~gf~~~~lwpl 157 (861)
++|+|+|++|||+++|++++.. ..+++||||++.++++++|+++.+.++++|+|+||||+++++++||+||||++|||+
T Consensus 81 ~~~~~~~~~ggL~~~l~~~~~~~~~~~~wvG~~~~~~~~~~~~~~~~~l~~~~~~~pv~l~~~~~~~~Y~gf~n~~LWPl 160 (854)
T PLN02205 81 KGWIFSWDENSLLLQLKDGLGDDEIEVIYVGCLKEEIHLNEQEEVSQILLETFKCVPTFLPPDLFTRYYHGFCKQQLWPL 160 (854)
T ss_pred cceEEEeCCCchHHHHhhhhhcccCceEEEEecCCCCCchhhhhHHHHHhcCceEEEeeCCHHHHHHHHHhhhhccccch
Confidence 7899999999999999988854 378999999999888888888888888899999999999999999999999999999
Q ss_pred cccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChH
Q 002979 158 FHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE 237 (861)
Q Consensus 158 ~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e 237 (861)
|||+++..|+++.+|++..|++|++||++||++|++.++|++|+|||||||||+||+|||+++|+++||||||||||++|
T Consensus 161 fH~~~~~~~~~~~~f~~~~w~~Y~~vN~~FA~~v~~~~~~~~d~VWVhDYhL~llP~~LR~~~~~~~IgfFlHiPFPs~e 240 (854)
T PLN02205 161 FHYMLPLSPDLGGRFNRSLWQAYVSVNKIFADRIMEVINPEDDFVWIHDYHLMVLPTFLRKRFNRVKLGFFLHSPFPSSE 240 (854)
T ss_pred hccCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEeCchhhHHHHHHHhhCCCCcEEEEecCCCCChH
Confidence 99998888888789999999999999999999999999987799999999999999999999999999999999999999
Q ss_pred HHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCC
Q 002979 238 IYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL 317 (861)
Q Consensus 238 ~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~ 317 (861)
+||+||||+|||+|||+||+|||||++|+|||++||+|+||+++..++|+++++|+||++.|+++|+|||++.|...+..
T Consensus 241 ifr~LP~r~eiL~glL~aDlIGFht~~yar~Fl~~~~r~lgl~~~~~~g~~~~~~~Gr~v~v~~~PigId~~~~~~~~~~ 320 (854)
T PLN02205 241 IYKTLPIREELLRALLNSDLIGFHTFDYARHFLSCCSRMLGLSYESKRGYIGLEYYGRTVSIKILPVGIHMGQLQSVLSL 320 (854)
T ss_pred HHhhCCcHHHHHHHHhcCCeEEecCHHHHHHHHHHHHHHhCCcccCCCcceeEEECCcEEEEEEEeCeEcHHHHHHHhcC
Confidence 99999999999999999999999999999999999999999999988888999999999999999999999999999999
Q ss_pred chhHHHHHHHHHHcC--CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 002979 318 PATATKIKEIEKQFD--GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYL 395 (861)
Q Consensus 318 ~~~~~~~~~l~~~~~--~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~ 395 (861)
|++.+++++++++++ |+++|+||||+|++|||.+||+|||+||++||+|+|||+||||++|+|+++++|+++++++++
T Consensus 321 ~~~~~~~~~l~~~~~~~~~~~ilgVDrlD~~KGi~~kl~A~e~~L~~~P~~~gkvvlvQia~psr~~~~~y~~~~~ev~~ 400 (854)
T PLN02205 321 PETEAKVKELIKQFCDQDRIMLLGVDDMDIFKGISLKLLAMEQLLMQHPEWQGKVVLVQIANPARGKGKDVKEVQAETHS 400 (854)
T ss_pred hhHHHHHHHHHHHhccCCCEEEEEccCcccccCHHHHHHHHHHHHHhCccccCCEEEEEEecCCCcccHHHHHHHHHHHH
Confidence 999999999999995 799999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCce
Q 002979 396 TAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475 (861)
Q Consensus 396 l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~ 475 (861)
+|+|||++||+.+|+||+|+.+.++++|+.|||++||||++||+|||||||++||+|||++++.++++++.+.+++++|+
T Consensus 401 ~v~rIN~~fg~~~~~Pv~~~~~~~~~~e~~aly~~ADv~lVT~lRDGMNLva~Eyia~~~~~~~~~~~~~~~~~~~~~gv 480 (854)
T PLN02205 401 TVKRINETFGKPGYDPIVLIDAPLKFYERVAYYVVAECCLVTAVRDGMNLIPYEYIISRQGNEKLDKLLGLEPSTPKKSM 480 (854)
T ss_pred HHHHHHhhcCCCCCceEEEEecCCCHHHHHHHHHhccEEEeccccccccccchheeEEccCccccccccccccccCCCCc
Confidence 99999999999999999999999999999999999999999999999999999999999998888888888888889999
Q ss_pred EEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhhcccc
Q 002979 476 LVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDHYSKR 555 (861)
Q Consensus 476 lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~ 555 (861)
||+|||+||+++|++|++|||||++++|+||.+||+||++||+.||++++++|++||+.+|+++|+++|.++|+++.+++
T Consensus 481 LiLSEfaGaa~~L~~Ai~VNP~d~~~~a~ai~~AL~m~~~Er~~R~~~~~~~v~~~d~~~W~~~fl~~l~~~~~~~~~~~ 560 (854)
T PLN02205 481 LVVSEFIGCSPSLSGAIRVNPWNIDAVADAMDSALEMAEPEKQLRHEKHYRYVSTHDVGYWARSFLQDLERTCRDHSRRR 560 (854)
T ss_pred eEeeeccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHHhhhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999998899
Q ss_pred ccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEC
Q 002979 556 CWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS 635 (861)
Q Consensus 556 ~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~T 635 (861)
||++|||++||+++++|+|++|+++.++++|+++++|+|++||||||++..+....++++++++|++||+++|+.|+|+|
T Consensus 561 ~~~~g~g~~~~~~~~~~~~~~l~~~~i~~~y~~~~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvS 640 (854)
T PLN02205 561 CWGIGFGLSFRVVALDPNFRKLSMEHIVSAYKRTTTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVS 640 (854)
T ss_pred hcccccccccccccccccccccCHHHHHHHHHhhcCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEe
Confidence 99999999999999999999999999999999999999999999999986544568999999999999999999999999
Q ss_pred CCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccC
Q 002979 636 GRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA 715 (861)
Q Consensus 636 GR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~ 715 (861)
||++..+++||+.+++++++|+||++++++++..|+......+..|++.+..+++.|++++||+++|.|+.+++|||+++
T Consensus 641 GR~~~~L~~~f~~~~~l~laaEHG~~ir~~~~~~w~~~~~~~~~~w~~~v~~i~~~y~ertpGs~IE~K~~slv~HyR~a 720 (854)
T PLN02205 641 ARSRKTLADWFSPCEKLGIAAEHGYFLRLKRDVEWETCVPVADCSWKQIAEPVMQLYTETTDGSTIEDKETALVWCYEDA 720 (854)
T ss_pred CCCHHHHHHHhCCCCCeEEEEeCCEEEEeCCCceeeecchhhhHHHHHHHHHHHHHHhcCCCchhheecceEEEEehhhC
Confidence 99999999999988779999999999999988889766554567899999999999999999999999999999999999
Q ss_pred CccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc
Q 002979 716 DPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI 795 (861)
Q Consensus 716 d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (861)
||+++.++++++.+++++.+.+.++.+.+|+.++||+|+++|||.|++++++++...|+++++++||||+.||++||+.+
T Consensus 721 dpd~~~~qa~el~~~l~~~l~~~~~~v~~G~~vvEV~p~gvnKG~Al~~Ll~~~~~~g~~~d~vl~~GDD~nDedMF~~~ 800 (854)
T PLN02205 721 DPDFGSCQAKELLDHLESVLANEPVTVKSGQNIVEVKPQGVSKGLVAKRLLSIMQERGMLPDFVLCIGDDRSDEDMFEVI 800 (854)
T ss_pred ChHHhhhhhHHHHHHHHHHHhcCceEEEECCcEEEEEeCCCCHHHHHHHHHHHHHhcCCCcccEEEEcCCccHHHHHHHh
Confidence 99999999999999999988888888999999999999999999999999876533488999999999999999999999
Q ss_pred cccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHHhhcCCC
Q 002979 796 LSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLATASSSK 846 (861)
Q Consensus 796 g~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~~~~~~~ 846 (861)
+....+..++..++.|+|+||.++|+|+|+++++++|.++|+.|++.+.+-
T Consensus 801 ~~~~~g~~~~~~~~~~~v~VG~~~S~A~y~L~d~~eV~~lL~~L~~~~~~~ 851 (854)
T PLN02205 801 TSSMAGPSIAPRAEVFACTVGQKPSKAKYYLDDTAEIVRLMQGLASVSEQI 851 (854)
T ss_pred hhhccCCcccccccceeEEECCCCccCeEecCCHHHHHHHHHHHHhcchhh
Confidence 854444556777788999999999999999999999999999999877654
No 2
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.8e-158 Score=1413.20 Aligned_cols=747 Identities=37% Similarity=0.679 Sum_probs=672.0
Q ss_pred CCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChh-HHHHHHHhhcCCceEEEEe
Q 002979 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVPTF 136 (861)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~pv~ 136 (861)
++|+||||||||+.++++++ |.|.++++.|||+++|.+ + ...+++||||+|..++.+ +++.+... +.+|+|+|||
T Consensus 93 ~~rlIiVSNRlPv~~~~~~~-g~~~~~~s~GGLvsaL~~-~-~~~~~~WVGw~g~~~~~~~~~~~~~~~-l~~~~~~pV~ 168 (934)
T PLN03064 93 RQRLLVVANRLPVSAVRRGE-DSWSLEISAGGLVSALLG-V-KEFEARWIGWAGVNVPDEVGQKALTKA-LAEKRCIPVF 168 (934)
T ss_pred CCCEEEEECCCCcceeecCC-CceEEeECCCCcHHHhcc-c-ccCCeEEEeeCCCCCCCcchhHHHHHH-hccCceEEEe
Confidence 68999999999999988654 789999999999999975 5 568999999999877653 45555444 5789999999
Q ss_pred CChHHHHHHHhhccccccccccccCC-CCCCC-CCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHH
Q 002979 137 LPHDLQKKFYLGFCKQHLWPLFHYML-PMCPD-HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (861)
Q Consensus 137 l~~~~~~~~y~gf~~~~lwpl~H~~~-~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~ 214 (861)
|+++++++||+||||++|||+|||+. +..+. ...+|++..|++|++||++||++|++.++|+ |+|||||||||+||+
T Consensus 169 l~~~~~~~~Y~gfcn~~LWPlfHy~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~g-D~VWVHDYHL~LlP~ 247 (934)
T PLN03064 169 LDEEIVHQYYNGYCNNILWPLFHYLGLPQEDRLATTRSFQSQFAAYKKANQMFADVVNEHYEEG-DVVWCHDYHLMFLPK 247 (934)
T ss_pred CCHHHHHHHHHHhhhcccchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHH
Confidence 99999999999999999999999973 22110 1246888999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecC
Q 002979 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFG 294 (861)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~g 294 (861)
|||+++|+++||||||||||++|+|||||+|++||+|||+||+|||||++|++||++||.|+||++... .++.++|
T Consensus 248 ~LR~~~p~~~IGfFlHiPFPs~Eifr~LP~r~elL~glL~aDlIGFqT~~y~rhFl~~c~rlLg~~~~~----~~v~~~G 323 (934)
T PLN03064 248 CLKEYNSNMKVGWFLHTPFPSSEIHRTLPSRSELLRSVLAADLVGFHTYDYARHFVSACTRILGLEGTP----EGVEDQG 323 (934)
T ss_pred HHHHhCCCCcEEEEecCCCCChHHHhhCCcHHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCccccC----CeEEECC
Confidence 999999999999999999999999999999999999999999999999999999999999999998644 2589999
Q ss_pred eEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002979 295 RTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 295 r~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
|.+.|.++|+|||++.|...+..+++.+++++++++++|+++||||||||+.|||.+||+||++||++||+|++||||||
T Consensus 324 r~v~V~~~PiGID~~~f~~~~~~~~v~~~~~~lr~~~~g~kiIlgVDRLD~~KGI~~kL~AfE~fL~~~Pe~r~kVVLvQ 403 (934)
T PLN03064 324 RLTRVAAFPIGIDSDRFIRALETPQVQQHIKELKERFAGRKVMLGVDRLDMIKGIPQKILAFEKFLEENPEWRDKVVLLQ 403 (934)
T ss_pred EEEEEEEEeCEEcHHHHHHHhcChhHHHHHHHHHHHhCCceEEEEeeccccccCHHHHHHHHHHHHHhCccccCCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002979 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
|+.|+|+++++|+++++++.++|++||++||+.+|+||+++.+.++++|+.+||++|||||+||+|||||||++||||||
T Consensus 404 Ia~psr~~v~eY~~l~~~V~~~V~rIN~~fg~~~w~Pv~~~~~~l~~eeL~AlY~~ADV~lvTslrDGmNLva~Eyva~~ 483 (934)
T PLN03064 404 IAVPTRTDVPEYQKLTSQVHEIVGRINGRFGTLTAVPIHHLDRSLDFHALCALYAVTDVALVTSLRDGMNLVSYEFVACQ 483 (934)
T ss_pred EcCCCCCCcHHHHHHHHHHHHHHHHHhhhccCCCcceEEEeccCCCHHHHHHHHHhCCEEEeCccccccCchHHHHHHhh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCH
Q 002979 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (861)
.. +.|+||+|||+|++++| .+|++|||||++++|+||.+||+|+++||+.|+++++++|.+||+
T Consensus 484 ~~---------------~~GvLILSEfaGaa~~L~~~AllVNP~D~~~vA~AI~~AL~M~~~Er~~r~~~~~~~V~~~d~ 548 (934)
T PLN03064 484 DS---------------KKGVLILSEFAGAAQSLGAGAILVNPWNITEVAASIAQALNMPEEEREKRHRHNFMHVTTHTA 548 (934)
T ss_pred cC---------------CCCCeEEeCCCchHHHhCCceEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHhhcccCCH
Confidence 75 47999999999999999 589999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCCC-----
Q 002979 534 AYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSI----- 608 (861)
Q Consensus 534 ~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~----- 608 (861)
.+|+++|+.+|.++..++.. ++. .+ +++|+.+.+.++|++++.++|||||||||++..+.
T Consensus 549 ~~Wa~~fl~~L~~~~~~~~~-~~~-----------~~---~~~l~~~~~~~~y~~a~~RLlfLDyDGTLap~~~~P~~~~ 613 (934)
T PLN03064 549 QEWAETFVSELNDTVVEAQL-RTR-----------QV---PPQLPPEDAIQRYLQSNNRLLILGFNATLTEPVDTPGRRG 613 (934)
T ss_pred HHHHHHHHHHHHHHHhhhhc-ccc-----------cc---CCCCCHHHHHHHHHhccceEEEEecCceeccCCCCccccc
Confidence 99999999999998654421 111 11 24799999999999999999999999999985432
Q ss_pred ------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEe-cCCccChHH
Q 002979 609 ------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET-NHLGADLEW 681 (861)
Q Consensus 609 ------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~-~~~~~~~~w 681 (861)
...++++++++|++||+++++.|+|+|||+...+++|++.+ +++++|+||++++.++ ..|.. .....+..|
T Consensus 614 ~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSGR~~~~Le~~fg~~-~L~LaAEHG~~~R~~~-~~w~~~~~~~~~~~W 691 (934)
T PLN03064 614 DQIKEMELRLHPELKEPLRALCSDPKTTIVVLSGSDRSVLDENFGEF-DMWLAAENGMFLRHTK-GEWMTTMPEHLNMDW 691 (934)
T ss_pred ccccccccCCCHHHHHHHHHHHhCCCCeEEEEeCCCHHHHHHHhCCC-CceEEeeCCeEEecCC-CcceeccccccchHH
Confidence 23478999999999999999999999999999999999887 7999999999998764 46874 333346689
Q ss_pred HHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHH-HHhcCCCEEEEEcCeEEEEecCCCCHHH
Q 002979 682 KKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLE-SVLANEPAVVKRGQHIVEVKPQGVSKGL 760 (861)
Q Consensus 682 ~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~-~~l~~~~~~v~~g~~~vEI~p~gvsKg~ 760 (861)
++.+..+|++|++++||+++|.|+++++|||+.+||+++..|++++.+++. ..+.+.++.+..|+..+||+|.++|||.
T Consensus 692 ~~~v~~ile~~~eRtPGS~IE~K~~SLawHYR~ADpe~g~~qA~el~~~L~~~~~~~~~v~V~~Gk~VVEVrP~gvnKG~ 771 (934)
T PLN03064 692 VDSVKHVFEYFTERTPRSHFETRETSLVWNYKYADVEFGRLQARDMLQHLWTGPISNAAVDVVQGSRSVEVRPVGVTKGA 771 (934)
T ss_pred HHHHHHHHHHHHhcCCCcEEEEcCcEEEEEecCCChhhHHHHHHHHHHHHHhhhccCCCcEEEeCCeEEEEEcCCCCHHH
Confidence 999999999999999999999999999999999999999999999999994 4556677899999999999999999999
Q ss_pred HHHHHHHHhhcCC---CCCCeEEEEeCCcc-hHHHHHHccccCCCC-------------------------------C--
Q 002979 761 VAEKVLVRMFNGG---RPPDFVMCVGDDRS-DEDMFESILSTVSGP-------------------------------S-- 803 (861)
Q Consensus 761 al~~ll~~l~~~g---i~~d~vlaiGD~~N-D~~Mf~~ag~~~~~~-------------------------------~-- 803 (861)
|+++|++++...+ .++|||+|+||+.. ||+||+++....... .
T Consensus 772 Av~~ll~~~~~~~~~~~~~DFvlc~GDd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 851 (934)
T PLN03064 772 AIDRILGEIVHSKSMTTPIDYVLCIGHFLGKDEDIYTFFEPELPSDSPAIARSRSPDGLKSSGDRRPSGKLPSSRSNSKN 851 (934)
T ss_pred HHHHHHHhhhhccccCCCCCEEEEeCCCCCCcHHHHHHHhccCCcccccccccccCCcccCCccccccCCCccccccccc
Confidence 9999999863222 36899999999875 999999986532100 0
Q ss_pred --------C---------------------C----------CCCceEEEEeCCCCcccceecCCHhHHHHHHHHHHhhcC
Q 002979 804 --------L---------------------P----------VPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLATASS 844 (861)
Q Consensus 804 --------~---------------------~----------~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~~~~~ 844 (861)
. + ...+.|+|+||.|.+.|+|++++.+||+.+|+.|++++.
T Consensus 852 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 931 (934)
T PLN03064 852 SQGKKQRSLLSSAKSGVNHAASHGSDRRPSPEKIGWSVLDLKGENYFSCAVGRKRSNARYLLGSSDDVVSFLKELANASS 931 (934)
T ss_pred cccccCCcccccccccccccccCCccccCCccccccccccccCcceEEEEeccccccceeecCCHHHHHHHHHHHhcccc
Confidence 0 0 122469999999999999999999999999999998775
Q ss_pred C
Q 002979 845 S 845 (861)
Q Consensus 845 ~ 845 (861)
.
T Consensus 932 ~ 932 (934)
T PLN03064 932 S 932 (934)
T ss_pred C
Confidence 4
No 3
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=100.00 E-value=1.8e-150 Score=1357.80 Aligned_cols=749 Identities=37% Similarity=0.670 Sum_probs=668.5
Q ss_pred CCCCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChh-HHHHHHHhhcCCceEEE
Q 002979 56 GSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDAS-EQEEVAQKLLDDFNCVP 134 (861)
Q Consensus 56 ~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~-~~~~~~~~~~~~~~~~p 134 (861)
...+|+||||||||+.++++++ |+|++++++|||+.+|.+ + ...+++||||+|.+++++ ++..+.. .+.+|+|+|
T Consensus 8 ~~~~rliiVsnrlp~~~~~~~~-~~~~~~~~~ggl~~al~~-~-~~~~~~Wvgw~g~~~~~~~~~~~~~~-~~~~~~~~p 83 (797)
T PLN03063 8 GERPRLLVVANRLPVSAKRTGE-DSWSLEMSPGGLVSALLG-V-KEFETKWIGWPGVDVHDEIGKAALTE-SLAEKGCIP 83 (797)
T ss_pred cCCCCEEEEECCCCccceecCC-CceEEeeCCCCHHHHHHH-H-HhcCceEEEeCCCcCCcccchhHHHH-HhhcCCeEE
Confidence 3578999999999999887643 789999999999999975 4 457999999999876543 3444433 457899999
Q ss_pred EeCChHHHHHHHhhccccccccccccC-CCCCCC-CCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccH
Q 002979 135 TFLPHDLQKKFYLGFCKQHLWPLFHYM-LPMCPD-HGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212 (861)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lwpl~H~~-~~~~~~-~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~ll 212 (861)
||| ++++++||+||||++|||+|||+ .+..+. ...+|+++.|++|++||++||++|++.++|+ |+|||||||||+|
T Consensus 84 v~l-~~~~~~~Y~gf~n~~LWPlfH~~~~~~~~~~~~~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWvhDYhL~ll 161 (797)
T PLN03063 84 VFL-NEVFDQYYNGYCNNILWPIFHYMGLPQEDRHDATRTFESQYDAYKKANRMFLDVVKENYEEG-DVVWCHDYHLMFL 161 (797)
T ss_pred eeh-HHHHHHHHHHHHhhhcchhhcCcCCCcccccccccccHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhhH
Confidence 999 99999999999999999999998 333222 1145667899999999999999999999985 9999999999999
Q ss_pred HHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEe
Q 002979 213 PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDY 292 (861)
Q Consensus 213 p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~ 292 (861)
|+|||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|+|||++||+|+||+++... .+.+
T Consensus 162 p~~lR~~~~~~~igfFlHiPFPs~e~fr~lp~r~~il~gll~aDligF~t~~y~r~Fl~~~~r~l~~~~~~~----~i~~ 237 (797)
T PLN03063 162 PQYLKEYNNKMKVGWFLHTPFPSSEIYKTLPSRSELLRAVLTADLIGFHTYDFARHFLSACTRILGVEGTHE----GVVD 237 (797)
T ss_pred HHHHHHhCCCCcEEEEecCCCCCHHHHhhCCCHHHHHHHHhcCCEEEeCCHHHHHHHHHHHHHHhCccccCC----ceEE
Confidence 999999999999999999999999999999999999999999999999999999999999999999876542 4789
Q ss_pred cCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEE
Q 002979 293 FGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVL 372 (861)
Q Consensus 293 ~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvL 372 (861)
+||.++|.++|+|||++.|......+++.....+++++++++++|++|||+|+.|||..+|+||++||+++|+++++++|
T Consensus 238 ~gr~~~I~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~lIl~VgRLd~~KGi~~lL~Afe~lL~~~P~~~~kvvL 317 (797)
T PLN03063 238 QGKVTRVAVFPIGIDPERFINTCELPEVKQHMKELKRFFAGRKVILGVDRLDMIKGIPQKYLAFEKFLEENPEWRDKVML 317 (797)
T ss_pred CCeEEEEEEEecccCHHHHHHHhcChhHHHHHHHHHHhcCCCeEEEEecccccccCHHHHHHHHHHHHHhCccccCcEEE
Confidence 99999999999999999999887777777888889999999999999999999999999999999999999999999999
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeee
Q 002979 373 VQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIV 452 (861)
Q Consensus 373 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~a 452 (861)
|||+.|+|+++++|+++++++.+++++||++||+.+|.||+++.+.++.+++.++|++|||||+||++||||||++||||
T Consensus 318 vqia~psr~~~~~y~~l~~~v~~l~g~In~~~g~~~~~pv~~l~~~v~~~el~aly~~ADvfvvtSlrEGmnLv~lEamA 397 (797)
T PLN03063 318 VQIAVPTRNDVPEYQKLKSQVHELVGRINGRFGSVSSVPIHHLDCSVDFNYLCALYAITDVMLVTSLRDGMNLVSYEFVA 397 (797)
T ss_pred EEEecCCCCchHHHHHHHHHHHHHHHHhhcccccCCCceeEEecCCCCHHHHHHHHHhCCEEEeCccccccCcchhhHhe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC
Q 002979 453 CRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (861)
Q Consensus 453 c~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (861)
||.+ +.|++|+|||+|+++++ .+|++|||||++++|+||.++|+|+++||+.|+++++++|.+|
T Consensus 398 ~g~p---------------~~gvlVlSe~~G~~~~l~~~allVnP~D~~~lA~AI~~aL~m~~~er~~r~~~~~~~v~~~ 462 (797)
T PLN03063 398 CQKA---------------KKGVLVLSEFAGAGQSLGAGALLVNPWNITEVSSAIKEALNMSDEERETRHRHNFQYVKTH 462 (797)
T ss_pred eecC---------------CCCCEEeeCCcCchhhhcCCeEEECCCCHHHHHHHHHHHHhCCHHHHHHHHHHHHHhhhhC
Confidence 9876 47999999999999999 4899999999999999999999999999999999999999999
Q ss_pred CHhHHHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCC----
Q 002979 532 DVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS---- 607 (861)
Q Consensus 532 ~~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~---- 607 (861)
|+.+|+++|+++|.++++.+..+. ...+.+|+.+.+.++|+++++++|||||||||++..+
T Consensus 463 ~~~~Wa~~fl~~l~~~~~~~~~~~---------------~~~~~~l~~~~~~~~y~~a~~rll~LDyDGTL~~~~~~~~~ 527 (797)
T PLN03063 463 SAQKWADDFMSELNDIIVEAELRT---------------RNIPLELPEQDVIQQYSKSNNRLLILGFYGTLTEPRNSQIK 527 (797)
T ss_pred CHHHHHHHHHHHHHHHhhhhhhcc---------------cCCCCCCCHHHHHHHHHhccCeEEEEecCccccCCCCCccc
Confidence 999999999999999987653211 1234579999999999999999999999999998543
Q ss_pred -CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecC-CccChHHHHHH
Q 002979 608 -IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNH-LGADLEWKKIV 685 (861)
Q Consensus 608 -~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~-~~~~~~w~~~v 685 (861)
....++++++++|++||+++++.|+|+|||+...+++|++.+ .++++|+||++++..+ ..|.... ...+.+|++.+
T Consensus 528 p~~a~p~~~l~~~L~~L~~d~~~~V~IvSGR~~~~L~~~~~~~-~l~l~aeHG~~~r~~~-~~w~~~~~~~~~~~w~~~v 605 (797)
T PLN03063 528 EMDLGLHPELKETLKALCSDPKTTVVVLSRSGKDILDKNFGEY-NIWLAAENGMFLRHTS-GEWVTTMPEHMNLDWVDGV 605 (797)
T ss_pred cccCCCCHHHHHHHHHHHcCCCCEEEEEeCCCHHHHHHHhCCC-CCcEEEeCCEEEecCC-CceeeccccccChhHHHHH
Confidence 224588999999999999999999999999999999999875 7999999999998754 4787543 33467899999
Q ss_pred HHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHH-HhcCCCEEEEEcCeEEEEecCCCCHHHHHHH
Q 002979 686 EPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLES-VLANEPAVVKRGQHIVEVKPQGVSKGLVAEK 764 (861)
Q Consensus 686 ~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~-~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ 764 (861)
.++++.|++++||+++|.|+++++|||+.+||+++..++.++.+++.+ .+.+.++.+..|+..+||+|+++|||.|++.
T Consensus 606 ~~~l~~~~~rtpGs~iE~K~~sla~HyR~adp~~g~~~a~el~~~l~~~~~~~~~~~v~~Gk~vvEvrp~gvnKG~Av~~ 685 (797)
T PLN03063 606 KNVFKYFTDRTPRSYVEKSETSLVWNYEYADVEFGRAQARDMLQHLWAGPISNASVDVVRGQKSVEVHAIGVTKGAAIGR 685 (797)
T ss_pred HHHHHHHHHhCCCcEEEEcCeEEEEEcCCCChHHHHHHHHHHHHHHHHhhccCCCcEEEECCeEEEEEcCCCChHHHHHH
Confidence 999999999999999999999999999999999998999999999844 4466678999999999999999999999999
Q ss_pred HHHHhhcC---CCCCCeEEEEeCCc-chHHHHHHccccCCC--------C-----------CCCCCCceEEEEeCCCCcc
Q 002979 765 VLVRMFNG---GRPPDFVMCVGDDR-SDEDMFESILSTVSG--------P-----------SLPVPPEIFACTVGRKPSK 821 (861)
Q Consensus 765 ll~~l~~~---gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~--------~-----------~~~~~~~~~av~vG~~~s~ 821 (861)
+++++... +..+|+|+|+||+. .||+||++++..... . .....+++|+|+||.++|+
T Consensus 686 ll~~~~~~~~~~~~~dfvl~~Gdd~~~DEdmF~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~VG~~~s~ 765 (797)
T PLN03063 686 ILGEIVHNKSMTTPIDFVFCSGYFLEKDEDVYTFFEPEILSKKKSSSSNYSDSDKKVSSNLVDLKGENYFSCAIGQARTK 765 (797)
T ss_pred HHHHhhhccccCCCCCEEEEeCCCCCCcHHHHHhccccccccccccccccccccccccccccccccCceEEEEECCCCcc
Confidence 99976221 23679999999985 699999998742210 0 0123567899999999999
Q ss_pred cceecCCHhHHHHHHHHHHhhcCCC
Q 002979 822 AKYYLDDATDVLKLLQGLATASSSK 846 (861)
Q Consensus 822 Aky~l~d~~eV~~~L~~L~~~~~~~ 846 (861)
|+||+++++||.++|+.|++.+...
T Consensus 766 A~y~l~~~~eV~~lL~~l~~~~~~~ 790 (797)
T PLN03063 766 ARYVLDSSNDVVSLLHKLAVANTTM 790 (797)
T ss_pred CeecCCCHHHHHHHHHHHhccCccc
Confidence 9999999999999999999765543
No 4
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=100.00 E-value=1.8e-141 Score=1284.13 Aligned_cols=720 Identities=37% Similarity=0.676 Sum_probs=657.7
Q ss_pred CcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCCh---hHHHHHHHhhcCCceEEEE
Q 002979 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA---SEQEEVAQKLLDDFNCVPT 135 (861)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~---~~~~~~~~~~~~~~~~~pv 135 (861)
+|+||||||||+..++++ ++|.+++++|||+.+|.+.+. ..+++||||+|.+.+. +++.++. ..+.+|+|+||
T Consensus 1 ~~livvsnr~p~~~~~~~--~~~~~~~~~ggl~~~l~~~~~-~~~~~wvg~~g~~~~~~~~~~~~~~~-~~~~~~~~~~v 76 (726)
T PRK14501 1 SRLIIVSNRLPVTVVRED--GGVELTPSVGGLATGLRSFHE-RGGGLWVGWPGLDLEEESEEQRARIE-PRLEELGLVPV 76 (726)
T ss_pred CCEEEEEcCCCcceeecC--CceEEeeCCCchHHHHHHHhh-cCCeEEEEeCCCCccccchhhhhhhh-hhccCceEEEE
Confidence 489999999999988764 589999999999999987554 5899999999976553 2233333 34678999999
Q ss_pred eCChHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHH
Q 002979 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (861)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~ 215 (861)
||+++++++||+||||++|||+|||+++. ..|++++|++|++||++||++|++.++|+ |+|||||||||+||++
T Consensus 77 ~l~~~~~~~~y~gf~n~~lWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~~~~~~~~~-d~vwvhDYhl~l~p~~ 150 (726)
T PRK14501 77 FLSAEEVDRYYEGFCNSTLWPLFHYFPEY-----TEFEDRFWESYERVNQRFAEAIAAIARPG-DVVWVHDYQLMLLPAM 150 (726)
T ss_pred eCCHHHHHHHHHHhhhccccchhcccCcc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeCchhhhHHHH
Confidence 99999999999999999999999999766 48999999999999999999999999985 9999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCe
Q 002979 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (861)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 295 (861)
||+++|+++||||||+|||++|+|++||+|++||+|||+||+|||||++|++||++||.|++++++... .+.++||
T Consensus 151 lr~~~~~~~igfFlH~pfP~~~~f~~lp~~~~ll~~ll~~Dligf~t~~~~r~Fl~~~~~~l~~~~~~~----~~~~~gr 226 (726)
T PRK14501 151 LRERLPDARIGFFLHIPFPSFEVFRLLPWREEILEGLLGADLIGFHTYDYVRHFLSSVLRVLGYETELG----EIRLGGR 226 (726)
T ss_pred HHhhCCCCcEEEEeeCCCCChHHHhhCCChHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHcCCccCCC----eEEECCE
Confidence 999999999999999999999999999999999999999999999999999999999999999875432 5889999
Q ss_pred EEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 002979 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (861)
Q Consensus 296 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi 375 (861)
.++|.++|+|||++.|.+....+.+....+++++.++++++|++|||+++.||+..+|+||++|++++|+++|+++|+||
T Consensus 227 ~~~v~v~p~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~~il~VgRl~~~Kgi~~~l~A~~~ll~~~p~~~~~v~lv~v 306 (726)
T PRK14501 227 IVRVDAFPMGIDYDKFHNSAQDPEVQEEIRRLRQDLRGRKIILSIDRLDYTKGIPRRLLAFERFLEKNPEWRGKVRLVQV 306 (726)
T ss_pred EEEEEEEECeEcHHHHHHHhcCchHHHHHHHHHHHcCCCEEEEEecCcccccCHHHHHHHHHHHHHhCccccCCEEEEEE
Confidence 99999999999999999888778888888889999999999999999999999999999999999999999999999999
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeec
Q 002979 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (861)
Q Consensus 376 ~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~ 455 (861)
+.|+|...++|+++++++.+++++||++||..+|.|++++.+.++++|+.++|++|||||+||++||||||++||||||.
T Consensus 307 ~~~sr~~~~~~~~l~~~~~~~v~~in~~~~~~~~~pv~~~~~~~~~~~l~~ly~~aDv~v~~S~~EG~~lv~~Eama~~~ 386 (726)
T PRK14501 307 AVPSRTGVPQYQEMKREIDELVGRINGEFGTVDWTPIHYFYRSLPFEELVALYRAADVALVTPLRDGMNLVAKEYVASRT 386 (726)
T ss_pred ecCCCcchHHHHHHHHHHHHHHHHHHhhcCCCCcceEEEEeCCCCHHHHHHHHHhccEEEecccccccCcccceEEEEcC
Confidence 99998888999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhH
Q 002979 456 GTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (861)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (861)
+ +.|++|+|+++|+++++.+|++|||||++++|+||.++|+|+.+|++.|++++++++.+||+.+
T Consensus 387 ~---------------~~g~~vls~~~G~~~~l~~~llv~P~d~~~la~ai~~~l~~~~~e~~~r~~~~~~~v~~~~~~~ 451 (726)
T PRK14501 387 D---------------GDGVLILSEMAGAAAELAEALLVNPNDIEGIAAAIKRALEMPEEEQRERMQAMQERLRRYDVHK 451 (726)
T ss_pred C---------------CCceEEEecccchhHHhCcCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHH
Confidence 5 3689999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCC--CCCCCC
Q 002979 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETS--IIKSPG 613 (861)
Q Consensus 536 W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~--~~~~~s 613 (861)
|+++|++++.++++++.... ...|+.|+.+.+.++|+.+++|+|+|||||||++... ....++
T Consensus 452 w~~~~l~~l~~~~~~~~~~~---------------~~~~~~~~~~~~~~~y~~~~~rLi~~D~DGTL~~~~~~~~~~~~~ 516 (726)
T PRK14501 452 WASDFLDELREAAEKNKAFA---------------SKPITPAAAEEIIARYRAASRRLLLLDYDGTLVPFAPDPELAVPD 516 (726)
T ss_pred HHHHHHHHHHHHHhhhhccc---------------cccCCccCHHHHHHHHHhccceEEEEecCccccCCCCCcccCCCC
Confidence 99999999999887653211 1235678999999999999999999999999998432 345689
Q ss_pred HHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHh
Q 002979 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYT 693 (861)
Q Consensus 614 ~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~ 693 (861)
++++++|++|++++|+.|+|+|||++..++++++.+ .++++++||++++.++ ..|..... .+..|++.+.++++.|.
T Consensus 517 ~~~~~~L~~L~~d~g~~V~ivSGR~~~~l~~~~~~~-~l~liaenG~~i~~~~-~~w~~~~~-~~~~w~~~v~~il~~~~ 593 (726)
T PRK14501 517 KELRDLLRRLAADPNTDVAIISGRDRDTLERWFGDL-PIHLVAEHGAWSRAPG-GEWQLLEP-VATEWKDAVRPILEEFV 593 (726)
T ss_pred HHHHHHHHHHHcCCCCeEEEEeCCCHHHHHHHhCCC-CeEEEEeCCEEEeCCC-CceEECCC-cchhHHHHHHHHHHHHH
Confidence 999999999987789999999999999999999876 5789999999998664 45665432 45789999999999999
Q ss_pred hcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCC
Q 002979 694 EATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGG 773 (861)
Q Consensus 694 ~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~g 773 (861)
++++|++++.++.++.|||++++++++..+++++.+++...+.+..+.+..|+.++||+|+++|||.|++++++ +
T Consensus 594 ~~~~gs~ie~k~~~l~~~~r~~d~~~~~~~a~~l~~~l~~~~~~~~~~v~~g~~~veV~p~~vnKG~al~~ll~-----~ 668 (726)
T PRK14501 594 DRTPGSFIEEKEASLAWHYRNADPELGEARANELILALSSLLSNAPLEVLRGNKVVEVRPAGVNKGRAVRRLLE-----A 668 (726)
T ss_pred hcCCCcEEEEcceEEEEEccCCCHHHHHHHHHHHHHHHHHHhcCCCeEEEECCeEEEEEECCCCHHHHHHHHHh-----c
Confidence 99999999999999999999999999888889999999888887788889999999999999999999999998 5
Q ss_pred CCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHHh
Q 002979 774 RPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLAT 841 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~~ 841 (861)
+++++++||||+.||++||+.++.. .++|+||++++.|+|+++++++|+++|+.|++
T Consensus 669 ~~~d~vl~~GD~~nDe~Mf~~~~~~-----------~~~v~vG~~~s~A~~~l~~~~eV~~~L~~l~~ 725 (726)
T PRK14501 669 GPYDFVLAIGDDTTDEDMFRALPET-----------AITVKVGPGESRARYRLPSQREVRELLRRLLD 725 (726)
T ss_pred CCCCEEEEECCCCChHHHHHhcccC-----------ceEEEECCCCCcceEeCCCHHHHHHHHHHHhc
Confidence 6889999999999999999998531 27999999999999999999999999999875
No 5
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.1e-131 Score=1155.57 Aligned_cols=728 Identities=56% Similarity=0.965 Sum_probs=688.9
Q ss_pred CCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeC
Q 002979 58 RERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFL 137 (861)
Q Consensus 58 ~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l 137 (861)
..|+|+||||||+.+.++.+++.|.|+++.+|++.++++++. +++..||||++.+++.++++.+.+.++..++|+||++
T Consensus 2 ~~r~i~vsn~lp~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~~vg~~~~~~~~~~~~~~~~~~~~~~~~~pv~~ 80 (732)
T KOG1050|consen 2 RPRIIVVSNRLPLKASKRTDTGKWSFSFSPGSLVSQLKGIFR-EMEVKWVGPLGDELDDSEKEDVSQELLEEFDSVPVFL 80 (732)
T ss_pred CceEEEEEccCceecccccCCCceeeecCCCCchhhhhcccc-cceeeEEeeccccCchhhHhHhhhhhhhhcCceeeec
Confidence 469999999999999766677899999999999999988766 6899999999988999999999999999999999999
Q ss_pred ChHHHHHHHhhccccccccccccC-CCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHH
Q 002979 138 PHDLQKKFYLGFCKQHLWPLFHYM-LPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFL 216 (861)
Q Consensus 138 ~~~~~~~~y~gf~~~~lwpl~H~~-~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~l 216 (861)
+++...++|+||||++|||+|||+ .+..+.+. .|+.+.|++|+++|++|||++++.++ ++|+|||||||||++|+|+
T Consensus 81 ~~~~~~~~y~~~~~~ilwP~~hy~~~p~~~~~~-~~~~~~w~~y~~~n~~f~d~ive~~~-~~d~vwihdyhlmllp~~l 158 (732)
T KOG1050|consen 81 DDELFDSYYNGYCKSILWPLFHYMLIPSEPAFK-LFDLELWKAYVKVNQAFADKIVEVYE-EGDIVWIHDYHLMLLPQML 158 (732)
T ss_pred CCchhhhhhhhhhhhcccceeecccCCCchhhh-hhHHHHHHHHHHHhHHHHHHHHHhcc-CCCcEEEEcchhhccchhh
Confidence 999999999999999999999999 67766664 78899999999999999999999999 5799999999999999999
Q ss_pred HhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeE
Q 002979 217 RKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRT 296 (861)
Q Consensus 217 r~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~ 296 (861)
|+++++++||||+|+|||++|+|+|+|.|+|||+||++||+|||||++|+|||++||.|++++++.+.++..++.+.||.
T Consensus 159 r~~~~~~~ig~flhspfpssEi~r~lp~r~eIl~gll~~~~i~f~t~d~arhFls~c~R~l~~~~~s~~~~~~v~~rgr~ 238 (732)
T KOG1050|consen 159 RERFNSAKIGFFLHSPFPSSEIYRCLPVRKEILRGLLYDDLLGFHTDDYARHFLSTCSRLLGLEVASKFPTAGVSGRGRD 238 (732)
T ss_pred hcccccceEEEeccCCCChHHHHHhcccHHHHHHhhhccCccccccccHHHHHHHHHHHHHHhhhhccCCcceEEeccce
Confidence 99999999999999999999999999999999999999999999999999999999999999999988888889999999
Q ss_pred EEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEe
Q 002979 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIV 376 (861)
Q Consensus 297 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~ 376 (861)
+.|.++|+|||+.+|......+.+..+..++++.++|+++|++|||+|+.||+.+++.||+++|++||+|+++|+|+||+
T Consensus 239 ~~v~~~pigid~~r~v~~~~~~~~~~~~~ei~~~~~g~klilgvD~~d~~kg~~~Kl~a~e~~L~~~pe~~~kVvliqi~ 318 (732)
T KOG1050|consen 239 VSVKALPIGIDVQRFVKLLELPYVGSKGMEIKEPFKGKKLILGVDRLDSIKGIQLKLLAFEQFLEEYPEWIDKVVLIQIE 318 (732)
T ss_pred eeeeecccccchHHhhccccchhHHHHHHHHhhhccCCceEecccccccccCchHHHHHHHHHHHhChhhhceEEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002979 377 NPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 377 ~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
+|+++++++|++++.++..++++||++||+..++||+++...++..++.++|.+||||+++++||||||+++||++|++.
T Consensus 319 ~~~~~~~~~v~~~k~~v~~~v~rIn~~f~~~~~~pV~~~~~~~~~~~l~a~~~Vaev~~v~s~rdGmnl~~~e~i~~~~~ 398 (732)
T KOG1050|consen 319 NPKRTDGKEVEELKFCVSVHVRRINEKFGSASYQPVHSLLKDLPFLELLALYKVAEVCPVTSWRDGMNLVFLEYILCQEN 398 (732)
T ss_pred cCCcccchHHHHHHHHhHhhhhhhhhccCCcccceEEEeeccCCHHHHhhhHHhhhheeecccccccchhhhHHHHhhcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999875
Q ss_pred CCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhH
Q 002979 457 TPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (861)
Q Consensus 457 ~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (861)
+.+++|+|||+|+++.+ ++++++||||.+++|.+|..||+|+++|+..|+.+++.++..|++.+
T Consensus 399 ---------------~~~~lVlsef~G~~~tl~d~aivvnpw~~~~~~~~i~~al~~s~~e~~~r~~~~~~~v~~~~~~~ 463 (732)
T KOG1050|consen 399 ---------------KKSVLVLSEFIGDDTTLEDAAIVVNPWDGDEFAILISKALTMSDEERELREPKHYKYVSTHDVVY 463 (732)
T ss_pred ---------------cCCceEEeeeccccccccccCEEECCcchHHHHHHHHHHhhcCHHHHhhcchhhhhhhcchhHHH
Confidence 47999999999999999 88999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHH
Q 002979 536 WARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPE 615 (861)
Q Consensus 536 W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~ 615 (861)
|+..|++.+ ++||+.|+ +.+++..+ |+.+.+++.|+++++|+|++|||||++...+..
T Consensus 464 W~~~~~~~l---------~~~~~~~~-~~~~~~~~------l~~~~~i~~y~~s~~rli~ldyd~t~~~~~~~~------ 521 (732)
T KOG1050|consen 464 WAKSFLQGL---------KRIWKVGF-LGFRVTPL------LTAEHIVSDYKKSKKRLILLDYDLTLIPPRSIK------ 521 (732)
T ss_pred HHHHHHHhh---------hhhhhhcc-cccccccc------cChhHhhhhhhhccceEEEecccccccCCCCch------
Confidence 999999933 45788888 88887655 788999999999999999999999999854322
Q ss_pred HHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhc
Q 002979 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEA 695 (861)
Q Consensus 616 ~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~ 695 (861)
+...|+.||.+++|.|+|+|||++..+.+|+..++++|++||||++++.+++ |.+.. .+++|++.+++++++|+++
T Consensus 522 ~~~~l~~L~~dp~n~v~i~s~~~r~~l~~~~~~~~~lgl~aEhG~f~r~~~~--w~~~~--~~~~w~~~v~~i~~~~~er 597 (732)
T KOG1050|consen 522 AISILKDLCSDPKNIVYIVSGRGRSVLEKWFFGCKNLGLAAEHGYFVRIPGK--WETCV--LDLDWKDLVKDIFQYYTER 597 (732)
T ss_pred HHHHHHHHhcCCCCeEEEEEccCchhhhhhccccccceeecccCceeccCCc--eeeec--ccccHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999987 99887 7889999999999999999
Q ss_pred CCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCC
Q 002979 696 TDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRP 775 (861)
Q Consensus 696 ~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~ 775 (861)
|||+++|.|+.+++|||+++|++++.+||+|++++|+. .+.++.+..|+..||+.|.|+|||.++..++..+ .-+
T Consensus 598 t~GS~ie~k~~~l~~hy~~ad~~~g~~qA~el~~~l~~--~~~~~~v~~g~~~Vev~~~gvsk~~~~~~~~~~~---~~~ 672 (732)
T KOG1050|consen 598 TPGSYIERKETALVWHYRNADPEFGELQAKELLEHLES--KNEPVEVVRGKHIVEVRPQGVSKGLAAERILSEM---VKE 672 (732)
T ss_pred CCCceecccCceEEEeeeccCcchhHHHHHHHHHHhcc--cCCCeEEEecCceEEEcccccchHHHHHHHHHhc---CCC
Confidence 99999999999999999999999999999999999998 7889999999999999999999999999999998 556
Q ss_pred CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHH
Q 002979 776 PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQ 837 (861)
Q Consensus 776 ~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~ 837 (861)
+++++|+||+..|++||..+......... ...|+|++|.+++.|+|+++++.+|.++|+
T Consensus 673 ~df~~c~g~d~tDed~~~~~~~~~~~~~~---~~~F~~~~g~~~t~a~~~~~~~~~v~~~l~ 731 (732)
T KOG1050|consen 673 PDFVLCIGDDRTDEDMFEFISKAKDPEKV---EEIFACTVGQKPSKAKYFLDDTHEVIRLLQ 731 (732)
T ss_pred cceEEEecCCCChHHHHHHHhhccCCccc---ceEEEEEcCCCCcccccccCChHHHHhhcc
Confidence 79999999999999999999865332222 678999999999999999999999999885
No 6
>PRK10117 trehalose-6-phosphate synthase; Provisional
Probab=100.00 E-value=1e-121 Score=1029.48 Aligned_cols=455 Identities=27% Similarity=0.519 Sum_probs=420.8
Q ss_pred CcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCC
Q 002979 59 ERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLP 138 (861)
Q Consensus 59 ~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~ 138 (861)
+|+||||||+|+... + +.+.|||+++|.+.+. ..+++||||+|...+++ +.+......+++|.||+|+
T Consensus 2 ~rLivVSNRlp~~~~-------~--~~~~GGL~~aL~~~l~-~~~g~WvGW~g~~~~~~--~~~~~~~~~~~~~~~v~L~ 69 (474)
T PRK10117 2 SRLVVVSNRIAPPDE-------H--KASAGGLAVGILGALK-AAGGLWFGWSGETGNED--QPLKKVKKGNITWASFNLS 69 (474)
T ss_pred CCEEEEECCCcCCCC-------C--CcCCCCcHHHHHHHHH-hcCceEEEecCCCCCCc--ccchhhhcCCceEEEecCC
Confidence 689999999996321 1 3457999999988765 57999999999643221 2233333467999999999
Q ss_pred hHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHh
Q 002979 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (861)
Q Consensus 139 ~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~ 218 (861)
++++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||++||+
T Consensus 70 ~~~~~~yY~gfsn~~LWPlfHy~~~~-----~~~~~~~w~~Y~~VN~~FA~~v~~~~~~~-D~VWVHDYhL~llp~~LR~ 143 (474)
T PRK10117 70 EQDYDEYYNQFSNAVLWPAFHYRLDL-----VQFQRPAWEGYLRVNALLADKLLPLLKDD-DIIWIHDYHLLPFASELRK 143 (474)
T ss_pred HHHHHHHHhhhhhcchhhhhCCCCCc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEeccHhhHHHHHHHH
Confidence 99999999999999999999999765 58999999999999999999999999985 9999999999999999999
Q ss_pred hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEE
Q 002979 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (861)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 298 (861)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||++++|++.... ..+.++||.+.
T Consensus 144 ~~~~~~IgFFlHiPFPs~eifr~LP~r~eil~glL~aDlIGFqt~~y~rnFl~~~~~~lg~~~~~~---~~v~~~gr~v~ 220 (474)
T PRK10117 144 RGVNNRIGFFLHIPFPTPEIFNALPPHDELLEQLCDYDLLGFQTENDRLAFLDCLSNLTRVTTRSG---KSHTAWGKAFR 220 (474)
T ss_pred hCCCCcEEEEEeCCCCChHHHhhCCChHHHHHHHHhCccceeCCHHHHHHHHHHHHHHcCCcccCC---CeEEECCeEEE
Confidence 999999999999999999999999999999999999999999999999999999999999876432 24678899999
Q ss_pred EEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002979 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 299 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
|+++|+|||++.|...+..+ ...++++++++++|+++|+||||+||+|||.++|+||++||++||+|+|||+|+||+.|
T Consensus 221 v~~~PigID~~~~~~~a~~~-~~~~~~~lr~~~~~~~lilgVDRLDytKGi~~rl~Afe~fL~~~Pe~~gkvvlvQia~p 299 (474)
T PRK10117 221 TEVYPIGIEPDEIAKQAAGP-LPPKLAQLKAELKNVQNIFSVERLDYSKGLPERFLAYEALLEKYPQHHGKIRYTQIAPT 299 (474)
T ss_pred EEEEECeEcHHHHHHHhhch-HHHHHHHHHHHcCCCeEEEEecccccccCHHHHHHHHHHHHHhChhhcCCEEEEEEcCC
Confidence 99999999999999888755 56778899999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002979 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
+|++.++|++++++++++|++||++||+.+|+||+|+.+.++++++.++|++||||+|||+|||||||++||+|||++
T Consensus 300 sR~~v~~Y~~l~~~v~~~vg~INg~fg~~~w~Pv~y~~~~~~~~~l~alyr~ADv~lVTplRDGMNLVAkEyva~q~~-- 377 (474)
T PRK10117 300 SRGDVQAYQDIRHQLETEAGRINGKYGQLGWTPLYYLNQHFDRKLLMKIFRYSDVGLVTPLRDGMNLVAKEYVAAQDP-- 377 (474)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHhccCCCCceeEEEecCCCCHHHHHHHHHhccEEEecccccccccccchheeeecC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002979 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
.++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++++++|.+||+.+|++
T Consensus 378 ------------~~~GvLILSefAGaA~~L~~AllVNP~d~~~~A~Ai~~AL~Mp~~Er~~R~~~l~~~v~~~dv~~W~~ 445 (474)
T PRK10117 378 ------------ANPGVLVLSQFAGAANELTSALIVNPYDRDEVAAALDRALTMPLAERISRHAEMLDVIVKNDINHWQE 445 (474)
T ss_pred ------------CCCccEEEecccchHHHhCCCeEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhCCHHHHHH
Confidence 25799999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHH
Q 002979 539 SFAQDLERACR 549 (861)
Q Consensus 539 ~fl~~l~~~~~ 549 (861)
+|+.+|.++..
T Consensus 446 ~fL~~L~~~~~ 456 (474)
T PRK10117 446 CFISDLKQIVP 456 (474)
T ss_pred HHHHHHHHhhh
Confidence 99999998753
No 7
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=100.00 E-value=1.1e-119 Score=1025.16 Aligned_cols=462 Identities=28% Similarity=0.464 Sum_probs=428.4
Q ss_pred EEcCCccceeecCCC-CcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCCh-hHH-HHHHHhhcCCceEEEEeCChH
Q 002979 64 VANMLPLHAKRDTET-GRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQ-EEVAQKLLDDFNCVPTFLPHD 140 (861)
Q Consensus 64 vsnrlP~~~~~~~~~-~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~-~~~~~~~~~~~~~~pv~l~~~ 140 (861)
||||||+.+++++++ .+|.+++++|||+++|.+.+.+..+++||||+|.+.++ ++. +.+......+|+|.||+|+++
T Consensus 1 vsnRlP~~~~~~~~g~~~~~~~~s~gGL~~al~~~l~~~~~g~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~ 80 (487)
T TIGR02398 1 LYHRLPYDEFRGADGKLQRRDPTSPNGIIPTLLSFFGDGRAGTWVAWAEHDENSGETFDSHMTVPAEYKLTAARIPLSKE 80 (487)
T ss_pred CCcCCCceeEECCCCCceEEeccCCCchHHHHHHHhhcccceEEEeeCCCCcccccccccccccccCCceeEEEEeCCHH
Confidence 799999999987654 35888999999999998877555789999999975321 111 112222245799999999999
Q ss_pred HHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhc
Q 002979 141 LQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRF 220 (861)
Q Consensus 141 ~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~ 220 (861)
++++||+||||++|||+|||+.+. ..|+++.|++|++||++||++|++.++|+ |+|||||||||+||++||++.
T Consensus 81 ~~~~~Y~gf~n~~LWPlfH~~~~~-----~~~~~~~w~~Y~~vN~~FA~~i~~~~~~~-d~vWVhDYhL~llp~~LR~~~ 154 (487)
T TIGR02398 81 QVDIFYHITSKEAFWPILHTFPER-----FQFREDDWQVFLKVNRAFAEAACLEAAEG-ATVWVHDYNLWLVPGYIRQLR 154 (487)
T ss_pred HHHHHHhhhhhccccccccCCccc-----cCcCHHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEecchhhHHHHHHHHhC
Confidence 999999999999999999998654 58999999999999999999999999984 999999999999999999999
Q ss_pred CCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCC---------------
Q 002979 221 NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKR--------------- 285 (861)
Q Consensus 221 ~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~--------------- 285 (861)
|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|+||+++....
T Consensus 155 ~~~~IgfFlHiPFPs~eifr~LP~r~~ll~glL~aDliGFqt~~y~~~Fl~~~~r~lg~~~~~~~~~~~~~~~~g~~~~~ 234 (487)
T TIGR02398 155 PDLKIAFFHHTPFPSADVFNILPWREQIIGSLLCCDYIGFHIPRYVENFVDAARGLMPLQTVSRQNVDPRFITVGTALGE 234 (487)
T ss_pred CCCeEEEEeeCCCCChHHHhhCCchHHHHHHHhcCCeEEeCCHHHHHHHHHHHHHHhCCccccccccccccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999998875432
Q ss_pred --CeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhC
Q 002979 286 --GHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQH 363 (861)
Q Consensus 286 --~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~ 363 (861)
..+++.++||.+.|+++|+|||++.|......+++.+.++++|+++.|+++|++|||+|++|||.++|+||++||++|
T Consensus 235 ~~~~~~v~~~gr~v~v~~~PiGID~~~f~~~~~~~~~~~~~~~lr~~~~~~kiIl~VDRLDy~KGI~~kl~Afe~~L~~~ 314 (487)
T TIGR02398 235 ERMTTALDTGNRVVKLGAHPVGTDPERIRSALAAASIREMMERIRSELAGVKLILSAERVDYTKGILEKLNAYERLLERR 314 (487)
T ss_pred cccccceeECCEEEEEEEEECEecHHHHHHHhcCchHHHHHHHHHHHcCCceEEEEecccccccCHHHHHHHHHHHHHhC
Confidence 123588999999999999999999999998889999999999999999999999999999999999999999999999
Q ss_pred CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCC
Q 002979 364 PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGM 443 (861)
Q Consensus 364 P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~ 443 (861)
|+|+||++||||+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+||||
T Consensus 315 Pe~~gkv~Lvqi~~psr~~v~~y~~l~~~v~~~v~~IN~~fg~~~~~pv~~~~~~v~~~el~alYr~ADV~lvT~lrDGm 394 (487)
T TIGR02398 315 PELLGKVTLVTACVPAASGMTIYDELQGQIEQAVGRINGRFARIGWTPLQFFTRSLPYEEVSAWFAMADVMWITPLRDGL 394 (487)
T ss_pred ccccCceEEEEEeCCCcccchHHHHHHHHHHHHHHHHhhccCCCCCccEEEEcCCCCHHHHHHHHHhCCEEEECcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHH
Q 002979 444 NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEK 523 (861)
Q Consensus 444 nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~ 523 (861)
|||++||||||++ ++|+||+|||+||+++|.+|++|||||++++|+||.+||+||.+||+.|+++
T Consensus 395 NLVa~Eyva~~~~---------------~~GvLILSefaGaa~~l~~AllVNP~d~~~~A~ai~~AL~m~~~Er~~R~~~ 459 (487)
T TIGR02398 395 NLVAKEYVAAQGL---------------LDGVLVLSEFAGAAVELKGALLTNPYDPVRMDETIYVALAMPKAEQQARMRE 459 (487)
T ss_pred CcchhhHHhhhcC---------------CCCCEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 9999999999875 4799999999999999999999999999999999999999999999999999
Q ss_pred hhhhhccCCHhHHHHHHHHHHHH
Q 002979 524 HYRYVSTHDVAYWARSFAQDLER 546 (861)
Q Consensus 524 ~~~~v~~~~~~~W~~~fl~~l~~ 546 (861)
++++|.+||+.+|+++|+.+|..
T Consensus 460 l~~~v~~~d~~~W~~~fl~~l~~ 482 (487)
T TIGR02398 460 MFDAVNYYDVQRWADEFLAAVSP 482 (487)
T ss_pred HHHHHhhCCHHHHHHHHHHHhhh
Confidence 99999999999999999999875
No 8
>PF00982 Glyco_transf_20: Glycosyltransferase family 20; InterPro: IPR001830 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 20 GT20 from CAZY comprises enzymes with only one known activity; alpha, alpha-trehalose-phosphate synthase [UDP-forming] (2.4.1.15 from EC). Synthesis of trehalose in the yeast Saccharomyces cerevisiae is catalysed by the trehalose-6-phosphate (Tre6P) synthase/phosphatase complex, which is composed of at least three different subunits encoded by the genes TPS1, TPS2, and TSL1. Tps1 and Tps2 carry the catalytic activities of trehalose synthesis, namely Tre6P synthase (Tps1) and Tre6P phosphatase (Tps2), while TsI1 has regulatory functions. There is some evidence that TsI1 and Tps3 may share a common function with respect to regulation and/or structural stabilisation of the Tre6P synthase/phosphatase complex in exponentially growing, heat-shocked cells []. OtsA (trehalose-6-phosphate synthase) from Escherichia coli has homology to the full-length TPS1, the N-terminal part of TPS2 and an internal region of TPS3 (TSL1) of yeast [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1UQU_A 2WTX_A 1UQT_B 1GZ5_B.
Probab=100.00 E-value=2.3e-120 Score=1033.78 Aligned_cols=467 Identities=45% Similarity=0.848 Sum_probs=358.8
Q ss_pred cEEEEEcCCccceeecCCCCc--EEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhH--HHHHHHhhcCCceEEEE
Q 002979 60 RKIIVANMLPLHAKRDTETGR--WCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASE--QEEVAQKLLDDFNCVPT 135 (861)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~--~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~--~~~~~~~~~~~~~~~pv 135 (861)
|+||||||||+.+++++++|. |+++.+.|||+.+|.+.+ +..+++||||++.+.+..+ ++.+.+.+.++|+|+||
T Consensus 2 ~livVsnrlPv~~~r~~~~G~~~~~~~~~~ggL~~al~~l~-~~~~~~WvGw~g~~~~~~~~~~~~v~~~~~~~~~~~pV 80 (474)
T PF00982_consen 2 RLIVVSNRLPVSVKRDPDDGSWGWSWKPSAGGLVSALDPLL-KKRGGIWVGWPGVDVDEEEDEQDRVEPRLLDEYNCVPV 80 (474)
T ss_dssp -------------------------GGGGS-HHHHHHHHHH-HHH-EEEEEEEEEES-TTS---EEEE---ETTEEEEEE
T ss_pred CcccccccccccccccccccccccccccCCCcHHHHHHHHH-hcCCCEEEEeCCCcCccccccccchhhhcccCceEEEE
Confidence 799999999999999874455 888888899999986644 4589999999998766544 44555667899999999
Q ss_pred eCChHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHH
Q 002979 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTF 215 (861)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~ 215 (861)
||+++++++||+||||++|||+|||.++..|.. ..|+.+.|++|++||++||++|++.++| +|+|||||||||+||++
T Consensus 81 ~l~~~~~~~~Y~gf~n~~LWPlfHy~~~~~~~~-~~~~~~~w~~Y~~vN~~FA~~i~~~~~~-~D~VWVhDYhL~llP~~ 158 (474)
T PF00982_consen 81 FLSPEEYDGYYNGFCNQVLWPLFHYRLDSRPDL-ARFEEEWWEAYKRVNRRFADAIAEVYRP-GDLVWVHDYHLMLLPQM 158 (474)
T ss_dssp EE-HHHHHHHTTTHHHHTHHHHHTT-GG----G-----HHHHHHHHHHHHHHHHHHGGG--T-T-EEEEESGGGTTHHHH
T ss_pred EcCHHHHHHHHHhhhhhccCccccccccccccc-chhhHHHHHHHHHHHHHHHHHHHHhCcC-CCEEEEeCCcHHHHHHH
Confidence 999999999999999999999999987622322 6899999999999999999999999997 59999999999999999
Q ss_pred HHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCe
Q 002979 216 LRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGR 295 (861)
Q Consensus 216 lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr 295 (861)
||+++|+++||||||||||++|+||+||+|++||+|||+||+|||||++|++||++||+|++|+++.+.+| ++.++||
T Consensus 159 LR~~~~~~~IgfFlHiPFPs~e~fr~lP~r~eiL~glL~aDlIgFqt~~~~~nFl~~~~r~lg~~~~~~~~--~v~~~Gr 236 (474)
T PF00982_consen 159 LRERGPDARIGFFLHIPFPSSEIFRCLPWREEILRGLLGADLIGFQTFEYARNFLSCCKRLLGLEVDSDRG--TVEYNGR 236 (474)
T ss_dssp HHHTT--SEEEEEE-S----HHHHTTSTTHHHHHHHHTTSSEEEESSHHHHHHHHHHHHHHS-EEEEETTE---EEETTE
T ss_pred HHhhcCCceEeeEEecCCCCHHHHhhCCcHHHHHHHhhcCCEEEEecHHHHHHHHHHHHHHcCCcccCCCc--eEEECCE
Confidence 99999999999999999999999999999999999999999999999999999999999999999888765 6999999
Q ss_pred EEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002979 296 TVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 296 ~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
.++|.++|+|||++.|...+..+++.++.+++++++++ +++|+||||+|++|||.+||+||++||++||+|+|||+|+|
T Consensus 237 ~v~v~~~pigId~~~~~~~~~~~~v~~~~~~l~~~~~~~~~ii~gvDrld~~kGi~~kl~Afe~fL~~~P~~~~kv~liQ 316 (474)
T PF00982_consen 237 RVRVGVFPIGIDPDAFAQLARSPEVQERAEELREKFKGKRKIIVGVDRLDYTKGIPEKLRAFERFLERYPEYRGKVVLIQ 316 (474)
T ss_dssp EEEEEE------HHHHHHHHH-S---HHHHHHHHHTTT-SEEEEEE--B-GGG-HHHHHHHHHHHHHH-GGGTTTEEEEE
T ss_pred EEEEEEeeccCChHHHHhhccChHHHHHHHHHHHhcCCCcEEEEEeccchhhcCHHHHHHHHHHHHHhCcCccCcEEEEE
Confidence 99999999999999999999999999999999999988 49999999999999999999999999999999999999999
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002979 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
|+.|+|++.++|++++++++++|++||++||+.+|+||+++.+.++++++.+||++||||++||+|||||||++||++||
T Consensus 317 i~~psr~~~~~y~~~~~~v~~~v~~IN~~~g~~~~~PI~~~~~~~~~~~~~aly~~aDv~lvTslrDGmNLva~Eyva~q 396 (474)
T PF00982_consen 317 IAVPSREDVPEYQELRREVEELVGRINGKYGTPDWTPIIYIYRSLSFEELLALYRAADVALVTSLRDGMNLVAKEYVACQ 396 (474)
T ss_dssp E--B-STTSHHHHHHHHHHHHHHHHHHHHH-BTTB-SEEEE-S---HHHHHHHHHH-SEEEE--SSBS--HHHHHHHHHS
T ss_pred EeeccCccchhHHHHHHHHHHHHHHHHhhcccCCceeEEEEecCCCHHHHHHHHHhhhhEEecchhhccCCcceEEEEEe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCC-CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCH
Q 002979 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDV 533 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~ 533 (861)
++ ++|+||+|||+||+++|. +|++|||||++++|+||.+||+||++||+.|+++++++|.+||+
T Consensus 397 ~~---------------~~GvLiLSefaGaa~~L~~~al~VNP~d~~~~A~ai~~AL~M~~~Er~~r~~~~~~~v~~~~~ 461 (474)
T PF00982_consen 397 DD---------------NPGVLILSEFAGAAEQLSEAALLVNPWDIEEVADAIHEALTMPPEERKERHARLREYVREHDV 461 (474)
T ss_dssp -T---------------S--EEEEETTBGGGGT-TTS-EEE-TT-HHHHHHHHHHHHT--HHHHHHHHHHHHHHHHHT-H
T ss_pred cC---------------CCCceEeeccCCHHHHcCCccEEECCCChHHHHHHHHHHHcCCHHHHHHHHHHHHHHhHhCCH
Confidence 86 479999999999999997 67999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHH
Q 002979 534 AYWARSFAQDLER 546 (861)
Q Consensus 534 ~~W~~~fl~~l~~ 546 (861)
.+|+++|+++|++
T Consensus 462 ~~W~~~~l~~L~~ 474 (474)
T PF00982_consen 462 QWWAESFLRDLKR 474 (474)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhhC
Confidence 9999999999974
No 9
>COG0380 OtsA Trehalose-6-phosphate synthase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1e-114 Score=966.22 Aligned_cols=466 Identities=39% Similarity=0.680 Sum_probs=432.5
Q ss_pred CCCCCcEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEE
Q 002979 55 SGSRERKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVP 134 (861)
Q Consensus 55 ~~~~~~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~p 134 (861)
.....|+|+||||+|+...+..+++...+..+.|||+.+|++.+ ...+++|+||+|...+..+..........++...|
T Consensus 11 ~~~~~r~ivvsnR~p~~~~~~~~~~~~~~~~s~ggL~~~l~~~~-~~~~~~W~gw~G~~~~~~~~~~~~~~~~~~~~~~~ 89 (486)
T COG0380 11 PLEDSRLIVVSNRLPVKKTPEGDKGIEFGKRSAGGLVTALKPLL-RVDGGTWIGWSGTTGPTDESSDDLKERIGEFTSAP 89 (486)
T ss_pred cccCCcEEEEEccCCCcccccCCCcceeeccCCcchhhhcchhh-HhhcceEEecCceeccccccchhhhhccccceEEE
Confidence 45678999999999999876666677888999999999997654 45899999999976642232222333356899999
Q ss_pred EeCChHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHH
Q 002979 135 TFLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPT 214 (861)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~ 214 (861)
|+++.+++++||+||||++|||+|||+.+. ..|++.+|++|++||++|||+|++.++++ |+||||||||+|||+
T Consensus 90 v~l~~~~~~~~Y~~fsn~iLWP~~Hy~~~~-----~~~~~~~w~~Y~~vN~~FAd~i~~~~~~g-DiIWVhDYhL~L~P~ 163 (486)
T COG0380 90 VILSDEDYEGYYNGFSNAILWPLFHYFIDD-----VAYERNWWDAYVKVNRKFADKIVEIYEPG-DIIWVHDYHLLLVPQ 163 (486)
T ss_pred EecCHHHHHHHHHHhhHhhhcceeeeecCc-----cccchHHHHHHHHHHHHHHHHHHHhcCCC-CEEEEEechhhhhHH
Confidence 999999999999999999999999999876 58999999999999999999999999985 999999999999999
Q ss_pred HHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEE---
Q 002979 215 FLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--- 291 (861)
Q Consensus 215 ~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--- 291 (861)
|||++.|+++||||||||||++|+|+|||+|+||++|||+||+|||||.+|++||+++|+|+++.... ..+.
T Consensus 164 mlR~~~~~~~IgfFlHiPfPssEvfr~lP~r~eIl~gll~~dligFqt~~y~~nF~~~~~r~~~~~~~-----~~~~~~~ 238 (486)
T COG0380 164 MLRERIPDAKIGFFLHIPFPSSEVFRCLPWREEILEGLLGADLIGFQTESYARNFLDLCSRLLGVTGD-----ADIRFNG 238 (486)
T ss_pred HHHHhCCCceEEEEEeCCCCCHHHHhhCchHHHHHHHhhcCCeeEecCHHHHHHHHHHHHHhcccccc-----ccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999986521 1233
Q ss_pred ecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcE
Q 002979 292 YFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKV 370 (861)
Q Consensus 292 ~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~v 370 (861)
++|+.+.+..+|+|||+..|......+.+..++.++++.+.+ +++|+||||+|+.|||..+++||++||++||+|+|||
T Consensus 239 ~~~~~v~v~a~PIgID~~~~~~~~~~~~v~~~~~el~~~~~~~~kiivgvDRlDy~kGi~~rl~Afe~lL~~~Pe~~~kv 318 (486)
T COG0380 239 ADGRIVKVGAFPIGIDPEEFERALKSPSVQEKVLELKAELGRNKKLIVGVDRLDYSKGIPQRLLAFERLLEEYPEWRGKV 318 (486)
T ss_pred cCCceEEEEEEeeecCHHHHHHhhcCCchhhHHHHHHHHhcCCceEEEEehhcccccCcHHHHHHHHHHHHhChhhhCce
Confidence 458999999999999999999999999998999999999976 9999999999999999999999999999999999999
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceee
Q 002979 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (861)
Q Consensus 371 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 450 (861)
+|+||+.|+|++.++|+.++.+++++|++||++||+.+|+||+|+++.++.+++.+||++||++++||+|||||||++||
T Consensus 319 vliQi~~pSr~~v~~y~~~~~~i~~~V~rIN~~fG~~~~~Pv~~l~~~~~~~~l~al~~~aDv~lVtplrDGMNLvakEy 398 (486)
T COG0380 319 VLLQIAPPSREDVEEYQALRLQIEELVGRINGEFGSLSWTPVHYLHRDLDRNELLALYRAADVMLVTPLRDGMNLVAKEY 398 (486)
T ss_pred EEEEecCCCccccHHHHHHHHHHHHHHHHHHhhcCCCCcceeEEEeccCCHHHHHHHHhhhceeeeccccccccHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc
Q 002979 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
+|||.. ++|+||+|||+||+.+|.+|++|||||.+++|+||++||+|+++||+.|++++++.|.+
T Consensus 399 Va~q~~---------------~~G~LiLSeFaGaa~~L~~AliVNP~d~~~va~ai~~AL~m~~eEr~~r~~~~~~~v~~ 463 (486)
T COG0380 399 VAAQRD---------------KPGVLILSEFAGAASELRDALIVNPWDTKEVADAIKRALTMSLEERKERHEKLLKQVLT 463 (486)
T ss_pred HHhhcC---------------CCCcEEEeccccchhhhccCEeECCCChHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHh
Confidence 999874 47999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHhHHHHHHHHHHHHH
Q 002979 531 HDVAYWARSFAQDLERA 547 (861)
Q Consensus 531 ~~~~~W~~~fl~~l~~~ 547 (861)
||+++|+++|+.+|.++
T Consensus 464 ~d~~~W~~~fl~~la~~ 480 (486)
T COG0380 464 HDVARWANSFLDDLAQA 480 (486)
T ss_pred hhHHHHHHHHHHHHHhc
Confidence 99999999999999873
No 10
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=100.00 E-value=7.2e-108 Score=935.54 Aligned_cols=454 Identities=39% Similarity=0.708 Sum_probs=424.0
Q ss_pred cEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCCh-hHHHHHHHhhcCCceEEEEeCC
Q 002979 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDA-SEQEEVAQKLLDDFNCVPTFLP 138 (861)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~-~~~~~~~~~~~~~~~~~pv~l~ 138 (861)
|+||||||+|+...++ + ++++.|||+++|.+.+. ..+++||||+|...++ +++..+...+..+|+|+||||+
T Consensus 1 ~livvsnr~p~~~~~~---~---~~~~~gGl~~al~~~~~-~~~~~Wvgw~g~~~~~~~~~~~~~~~~~~~~~~~~v~l~ 73 (456)
T TIGR02400 1 RLIVVSNRLPVPITRG---G---LEPSAGGLAVALLGALK-ATGGVWFGWSGKTVEEDEGEPFLRTELEGKITLAPVFLS 73 (456)
T ss_pred CEEEEECCCCccccCC---C---CCcCCCCHHHHHHHHHh-ccCcEEEEeCCCCCCccchhhhHHHhhccCceEEEEECC
Confidence 6999999999988754 2 56778999999988665 5799999999976553 3334555556788999999999
Q ss_pred hHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHh
Q 002979 139 HDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRK 218 (861)
Q Consensus 139 ~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~ 218 (861)
++++++||+||||++|||+|||+.+. .+|+++.|++|++||++||++|++.++| +|+|||||||||+||.+||+
T Consensus 74 ~~~~~~~y~gf~n~~lWPl~H~~~~~-----~~~~~~~w~~Y~~vN~~fA~~i~~~~~~-~d~vwvhDYhl~l~p~~lr~ 147 (456)
T TIGR02400 74 EEDVDGYYNGFSNSTLWPLFHYRPDL-----IRYDRKAWEAYRRVNRLFAEALAPLLQP-GDIVWVHDYHLMLLPAMLRE 147 (456)
T ss_pred HHHHHHHHHHhhhhhcchhhcccccc-----cccCHHHHHHHHHHHHHHHHHHHHhCCC-CCEEEEecchhhHHHHHHHh
Confidence 99999999999999999999999654 5899999999999999999999999997 49999999999999999999
Q ss_pred hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEE
Q 002979 219 RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVY 298 (861)
Q Consensus 219 ~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~ 298 (861)
+.|+++||||||||||++|+|++||+|++||+|||+||+|||||++|++||++||+|++|+++... ++.+.|+.++
T Consensus 148 ~~~~~~igfFlHipfP~~e~f~~lp~r~~il~gll~~dligF~t~~~~~~Fl~~~~~~l~~~~~~~----~~~~~g~~~~ 223 (456)
T TIGR02400 148 LGVQNKIGFFLHIPFPSSEIYRTLPWRRELLEGLLAYDLVGFQTYDDARNFLSAVSRELGLETLPN----GVESGGRTVR 223 (456)
T ss_pred hCCCCeEEEEEeCCCCChHHHhhCCcHHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHhCCcccCC----ceEECCcEEE
Confidence 999999999999999999999999999999999999999999999999999999999999977543 3678899999
Q ss_pred EEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002979 299 IKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 299 i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
|.++|+|||++.|.+....+.+.+..+.+++++.++++|++|||+++.||+..+|+||++|++++|+++++++|+|++.|
T Consensus 224 v~viP~GID~~~f~~~~~~~~~~~~~~~lr~~~~~~~vIl~VgRLd~~KGi~~ll~A~~~ll~~~p~~~~~v~Lv~v~~p 303 (456)
T TIGR02400 224 VGAFPIGIDVDRFAEQAKKPSVQKRIAELRESLKGRKLIIGVDRLDYSKGLPERLLAFERFLEEHPEWRGKVVLVQIAVP 303 (456)
T ss_pred EEEecCcCCHHHHHHHhcChhHHHHHHHHHHHcCCCeEEEEccccccccCHHHHHHHHHHHHHhCccccCceEEEEEecC
Confidence 99999999999999888888888888889999999999999999999999999999999999999999999999999999
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002979 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
+|+++++|+++++++++++++||++||..+|.|++++.+.++.+++.++|++|||||+||++||||||++|||||+.|
T Consensus 304 ~rg~~~~~~~l~~~i~~lv~~in~~~~~~~~~pv~~l~~~~~~~el~aly~aaDv~vv~S~~EG~~Lv~lEamA~g~P-- 381 (456)
T TIGR02400 304 SRGDVPEYQQLRRQVEELVGRINGRFGTLDWTPIRYLNRSYDREELMALYRAADVGLVTPLRDGMNLVAKEYVAAQDP-- 381 (456)
T ss_pred CccCchHHHHHHHHHHHHHHHHHhccCCCCCccEEEEcCCCCHHHHHHHHHhCcEEEECccccccCccHHHHHHhcCC--
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002979 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
+.|+||+|+++|+++++.+|++|||||++++|+||.++|+|+.+||+.|+++++++|.+||+.+|++
T Consensus 382 -------------~~g~vVlS~~~G~~~~l~~gllVnP~d~~~lA~aI~~aL~~~~~er~~r~~~~~~~v~~~~~~~W~~ 448 (456)
T TIGR02400 382 -------------KDGVLILSEFAGAAQELNGALLVNPYDIDGMADAIARALTMPLEEREERHRAMMDKLRKNDVQRWRE 448 (456)
T ss_pred -------------CCceEEEeCCCCChHHhCCcEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhhCCHHHHHH
Confidence 3599999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHH
Q 002979 539 SFAQDLE 545 (861)
Q Consensus 539 ~fl~~l~ 545 (861)
+|+.+|.
T Consensus 449 ~~l~~l~ 455 (456)
T TIGR02400 449 DFLSDLN 455 (456)
T ss_pred HHHHHhh
Confidence 9999874
No 11
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=100.00 E-value=4.8e-98 Score=861.20 Aligned_cols=459 Identities=44% Similarity=0.787 Sum_probs=428.7
Q ss_pred cEEEEEcCCccceeecCCCCcEEEEecCChhhHhhhccccCCCCeEEEecCCCCCChhHHHHHHHhhcCCceEEEEeCCh
Q 002979 60 RKIIVANMLPLHAKRDTETGRWCFSLDEDLLLLHLKDGFSSDTEVIYVGSLKADIDASEQEEVAQKLLDDFNCVPTFLPH 139 (861)
Q Consensus 60 ~~iivsnrlP~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~pv~l~~ 139 (861)
|+||||||+|+..+++++ |.|.++++.|||+.+|.+.+ +..+++||||++.+.+..+++.+.+....+|+|+|||+++
T Consensus 1 ~li~vsnr~p~~~~~~~~-~~~~~~~~~ggl~~~l~~~~-~~~~~~wvg~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~ 78 (460)
T cd03788 1 RLVVVSNRLPVSIERDGD-GEFEARRSAGGLATALKGLL-KRTGGLWVGWSGIEEDEEEEDEVSTELLGEYTVAPVFLSP 78 (460)
T ss_pred CEEEEECCCCceeEEcCC-CceEeccCCCcHHHHHHHHH-hcCCeEEEEeCCCCCCcccchhhhhhhcCCceEEEeeCCH
Confidence 689999999999998764 68999999999999997654 4579999999998776544444555667899999999999
Q ss_pred HHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhh
Q 002979 140 DLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKR 219 (861)
Q Consensus 140 ~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~ 219 (861)
++++.||+||||++|||+|||+.+. .+|++++|++|++||++||++|.+.++| +|+||||||||++||.+||++
T Consensus 79 ~~~~~~y~~f~~~~LWp~~H~~~~~-----~~~~~~~w~~Y~~vN~~fa~~i~~~~~~-~d~iwihDyhl~llp~~lr~~ 152 (460)
T cd03788 79 EEFEGYYNGFSNEVLWPLFHYRLDL-----ARFDREDWEAYVRVNRKFADAIAEVLRP-GDLVWVHDYHLLLLPQMLRER 152 (460)
T ss_pred HHHHHHHHHhhhhhcchhhcCCCCc-----cccCHHHHHHHHHHHHHHHHHHHHhcCC-CCEEEEeChhhhHHHHHHHhh
Confidence 9999999999999999999999776 5899999999999999999999999997 499999999999999999999
Q ss_pred cCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEE
Q 002979 220 FNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYI 299 (861)
Q Consensus 220 ~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i 299 (861)
.++++||||||||||++|+|+++|+|++|+++||+||+|||||++|++||+++|+++++++.... ..+.++|+.++|
T Consensus 153 ~~~~~i~~f~HipfP~~e~~~~lp~~~~ll~~~l~~D~igF~t~~~~~~Fl~~~~~~l~~~~~~~---~~i~~~g~~~~i 229 (460)
T cd03788 153 GPDARIGFFLHIPFPSSEIFRCLPWREELLRGLLGADLIGFQTERYARNFLSCCSRLLGLEVTDD---GGVEYGGRRVRV 229 (460)
T ss_pred CCCCeEEEEEeCCCCChHHHhhCCChHHHHHHHhcCCEEEECCHHHHHHHHHHHHHHcCCcccCC---ceEEECCEEEEE
Confidence 99999999999999999999999999999999999999999999999999999999999886652 368899999999
Q ss_pred EEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCC
Q 002979 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPA 379 (861)
Q Consensus 300 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~ 379 (861)
.++|+|||++.|......+....+.++++..+.++++|++|||+++.||+..+|+||+++++++|+++++++|+|+|.|+
T Consensus 230 ~vip~GID~~~f~~~~~~~~~~~~~~~~~~~~~~~~~il~vgRl~~~Kgi~~ll~A~~~ll~~~p~~~~~v~Lv~vg~~~ 309 (460)
T cd03788 230 GAFPIGIDPDAFRKLAASPEVQERAAELRERLGGRKLIVGVDRLDYSKGIPERLLAFERLLERYPEWRGKVVLVQIAVPS 309 (460)
T ss_pred EEEeCeEcHHHHHHHhcCchhHHHHHHHHHhcCCCEEEEEecCccccCCHHHHHHHHHHHHHhChhhcCCEEEEEEccCC
Confidence 99999999999998777676666667777778899999999999999999999999999999999999999999999999
Q ss_pred CCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCc
Q 002979 380 RGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPI 459 (861)
Q Consensus 380 r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~ 459 (861)
|+++++++++++++.+++++||.+||..+|.|++++.+.++.+++.++|++|||||+||.+||||||++|||||+.|
T Consensus 310 ~g~~~~~~~l~~~l~~~v~~in~~~g~~~~~~v~~~~g~v~~~el~~~y~~aDv~v~pS~~Eg~~lv~lEAma~g~p--- 386 (460)
T cd03788 310 RTDVPEYQELRREVEELVGRINGKFGTLDWTPVRYLYRSLPREELAALYRAADVALVTPLRDGMNLVAKEYVACQDD--- 386 (460)
T ss_pred CcCcHHHHHHHHHHHHHHHHHHhccCCCCceeEEEEeCCCCHHHHHHHHHhccEEEeCccccccCcccceeEEEecC---
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999886
Q ss_pred ccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHH
Q 002979 460 MDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (861)
Q Consensus 460 ~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~ 539 (861)
++|++|+|+++|+++.+.+|++|||+|++++|++|.++|+|+++|++.+++++++++.++|+..|+++
T Consensus 387 ------------~~g~vV~S~~~G~~~~~~~g~lv~p~d~~~la~ai~~~l~~~~~e~~~~~~~~~~~v~~~~~~~w~~~ 454 (460)
T cd03788 387 ------------DPGVLILSEFAGAAEELSGALLVNPYDIDEVADAIHRALTMPLEERRERHRKLREYVRTHDVQAWANS 454 (460)
T ss_pred ------------CCceEEEeccccchhhcCCCEEECCCCHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHhCCHHHHHHH
Confidence 47999999999999998889999999999999999999999999999999999999999999999999
Q ss_pred HHHHH
Q 002979 540 FAQDL 544 (861)
Q Consensus 540 fl~~l 544 (861)
|+++|
T Consensus 455 ~l~~l 459 (460)
T cd03788 455 FLDDL 459 (460)
T ss_pred HHHhh
Confidence 99987
No 12
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=100.00 E-value=8.8e-34 Score=341.15 Aligned_cols=540 Identities=14% Similarity=0.130 Sum_probs=322.8
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHh-----------------cCCchHHH-HHHhhcCCEEeec
Q 002979 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR-----------------TLPVRDEI-LRGLLNCDLIGFH 261 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~-----------------~lp~r~~i-l~~ll~~dligF~ 261 (861)
|+|+-|+.+--.+...|++++ +++..++.|.- ..+-++ .++.|-++ -..+-.||.|--.
T Consensus 312 DvIHaHyw~sG~aa~~L~~~l-gVP~V~T~HSL--gr~K~~~ll~~g~~~~~~~~~~y~~~~Ri~~Ee~~l~~Ad~VIas 388 (1050)
T TIGR02468 312 YVIHGHYADAGDSAALLSGAL-NVPMVLTGHSL--GRDKLEQLLKQGRMSKEEINSTYKIMRRIEAEELSLDASEIVITS 388 (1050)
T ss_pred CEEEECcchHHHHHHHHHHhh-CCCEEEECccc--hhhhhhhhcccccccccccccccchHHHHHHHHHHHHhcCEEEEe
Confidence 899999777667777777665 58999999963 111111 12222221 2235678988877
Q ss_pred ChHhHHHHHHHHH-------HHhCCccccCCCeeeEEecCe-EEEEEEecccCCchHHHHhhCCchh-------------
Q 002979 262 TFDYARHFLSCCS-------RMLGLDYESKRGHIGLDYFGR-TVYIKILPVGVHMGRLESVLNLPAT------------- 320 (861)
Q Consensus 262 t~~~~~~Fl~~~~-------r~lg~~~~~~~~~~~~~~~gr-~~~i~v~p~GId~~~~~~~~~~~~~------------- 320 (861)
|......-...-. |.|.. ...+ ++.++|+ .-++.|+|+|||+++|.+.......
T Consensus 389 T~qE~~eq~~lY~~~~~~~~~~~~~--~~~~---gv~~~g~~~~ri~VIPpGVD~~~F~P~~~~~~~~~~~~~~~~~~~~ 463 (1050)
T TIGR02468 389 TRQEIEEQWGLYDGFDVILERKLRA--RARR---GVSCYGRFMPRMAVIPPGMEFSHIVPHDGDMDGETEGNEEHPAKPD 463 (1050)
T ss_pred CHHHHHHHHHHhccCCchhhhhhhh--hhcc---cccccccCCCCeEEeCCCCcHHHccCCCccccchhccccccccccc
Confidence 7766554322110 11100 0111 2333443 2278899999999999753211110
Q ss_pred HHHHHHHHHHc--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH----HHHHHHHH
Q 002979 321 ATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV----QEAKKETY 394 (861)
Q Consensus 321 ~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~----~~~~~~v~ 394 (861)
.....+++..+ .++++||+|+|+++.||+..+|+||..+.+..+.. ++++ .+|... +.... .+...++.
T Consensus 464 ~~~~~~l~r~~~~pdkpvIL~VGRL~p~KGi~~LIeAf~~L~~l~~~~--nL~L-IiG~gd--d~d~l~~~~~~~l~~L~ 538 (1050)
T TIGR02468 464 PPIWSEIMRFFTNPRKPMILALARPDPKKNITTLVKAFGECRPLRELA--NLTL-IMGNRD--DIDEMSSGSSSVLTSVL 538 (1050)
T ss_pred chhhHHHHhhcccCCCcEEEEEcCCccccCHHHHHHHHHHhHhhccCC--CEEE-EEecCc--hhhhhhccchHHHHHHH
Confidence 00112343333 56889999999999999999999999987543321 2333 345321 11111 12234445
Q ss_pred HHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCCcceeeeeeecCCCcccccccCCCCC
Q 002979 395 LTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDS 470 (861)
Q Consensus 395 ~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~ 470 (861)
.++++. +....|.|.++++++++.++|+.| ||||+||.+|||||+++|||||
T Consensus 539 ~li~~l-------gL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAc----------------- 594 (1050)
T TIGR02468 539 KLIDKY-------DLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAH----------------- 594 (1050)
T ss_pred HHHHHh-------CCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHh-----------------
Confidence 555443 334567788899999999999998 6999999999999999999999
Q ss_pred CCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002979 471 PHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 471 ~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++|+ .++.++...++.++.+..+++...++.+++.+...
T Consensus 595 --GlPVVASdvGG~~EII~~g~nGlLVdP~D~eaLA~AL~~LL~-Dpelr~~m~~~gr~~v~~FSWe~ia~~yl~~i~~~ 671 (1050)
T TIGR02468 595 --GLPMVATKNGGPVDIHRVLDNGLLVDPHDQQAIADALLKLVA-DKQLWAECRQNGLKNIHLFSWPEHCKTYLSRIASC 671 (1050)
T ss_pred --CCCEEEeCCCCcHHHhccCCcEEEECCCCHHHHHHHHHHHhh-CHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHH
Confidence 55699999999888873 5899999999999999999997 44555556667777888899999999999888876
Q ss_pred HHhhcc-cccc-----c-----cC--------CCcceeeeccCccccc----------CCHH----HHH-----------
Q 002979 548 CRDHYS-KRCW-----G-----IG--------LGLGFRVLSLSPSFRR----------LSID----HIV----------- 583 (861)
Q Consensus 548 ~~~~~~-~~~~-----~-----~g--------~g~~~~~~~~~~~f~~----------l~~~----~~~----------- 583 (861)
+..+-. ++.. . .+ +.|++.+ |-.... ++.+ .+.
T Consensus 672 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 748 (1050)
T TIGR02468 672 RPRHPQWQRDTDDGEEASEDESPGDSLRDIQDISLNLSV---DGDKESNNGSSNVEGSGPPADRVAKIENAVRSWSKSPK 748 (1050)
T ss_pred hccCcccccccccccccccccCccccccccccchhhccc---cccccccccccccccccchhhHHHHHHHHHhhcccccc
Confidence 544311 0000 0 01 0111110 000000 0000 010
Q ss_pred ------------HHHH--hccceEEE--ecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002979 584 ------------SAYR--KTERRAIF--LDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 584 ------------~~y~--~s~~klI~--~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
..|. ....++++ +|+|+| .. ....-..+++++++-.....+.++++|||+...+..++.
T Consensus 749 ~~~~~~~~~~~~~~~~~~~~~~~~~via~D~d~~-~~----~~~~l~~~~~~~~~~~~~~~igfv~aTGR~l~~~~~~l~ 823 (1050)
T TIGR02468 749 GSSAKAQQGSGAGKYPALRRRKRLFVIAVDCYDD-KD----LLQIIKNIFEAVRKERMEGSSGFILSTSMTISEIQSFLK 823 (1050)
T ss_pred ccccccccccccccCccccccceEEEEEeccCCC-CC----hHHHHHHHHHHHhccccCCceEEEEEcCCCHHHHHHHHH
Confidence 1111 11246666 999999 32 111222333333321124458899999999999999886
Q ss_pred cc--c---CCceEecCcEEEEeCCc-----ceEEec---CCccChHH-HHHHHHHHHHHhhc--------CCCceEeecc
Q 002979 648 PC--E---MLGIAAEHGYFIRWNKT-----SEWETN---HLGADLEW-KKIVEPVMRSYTEA--------TDGSNIEIKE 705 (861)
Q Consensus 648 ~~--~---~lgliaenG~~i~~~~~-----~~~~~~---~~~~~~~w-~~~v~~i~~~y~~~--------~~gs~ie~k~ 705 (861)
.. + ..-+||.-|..|+++.. ..|... ....+..| .+.+...+..+... .++...+...
T Consensus 824 ~~~lp~~~PD~lI~~vGTeIyy~~~~~~~~~~~~~D~~w~~hI~~rW~ge~~r~~L~~l~~~~~~~~~~~~~~l~~Q~~~ 903 (1050)
T TIGR02468 824 SGGLNPTDFDALICNSGSELYYPSLNGSEEGKLVADQDYHSHIEYRWGGEGLRKTLVKWAASINEKKGENEEQIVEEDEE 903 (1050)
T ss_pred hCCCCCCCCCEEEeCCCcceeccCcCCCCCCCceECHHHHHHHHccCCcHHHHHHHHHHhhhcccccccccccceecChh
Confidence 53 2 22379999998887521 112110 01112235 22333333333221 1223333333
Q ss_pred c----eeEeeeccCCccchhccHHHHHHHHHHHhcCCCE-EEEEc-CeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeE
Q 002979 706 S----ALVWHHQDADPDFGSCQAKELLDHLESVLANEPA-VVKRG-QHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFV 779 (861)
Q Consensus 706 ~----~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~-~v~~g-~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~v 779 (861)
. ++.+...+.+. . ...+++.+.|+.. .... .+++. ..+++|.|..+|||.|+++|..++ |++.+++
T Consensus 904 ~q~~~k~SY~v~d~~~--~-~~v~elr~~Lr~~--gLr~~~iys~~~~~LDVlP~~ASKgqAlRyL~~rw---gi~l~~v 975 (1050)
T TIGR02468 904 SSTDHCYAFKVKDPSK--V-PPVKELRKLLRIQ--GLRCHAVYCRNGTRLNVIPLLASRSQALRYLFVRW---GIELANM 975 (1050)
T ss_pred hCCCceEEEEecCccc--C-ccHHHHHHHHHhC--CCceEEEeecCCcEeeeeeCCCCHHHHHHHHHHHc---CCChHHe
Confidence 2 23332222221 1 1234555555422 2222 33444 489999999999999999999999 9999999
Q ss_pred EE-EeCCcc-hH-HHHHHc
Q 002979 780 MC-VGDDRS-DE-DMFESI 795 (861)
Q Consensus 780 la-iGD~~N-D~-~Mf~~a 795 (861)
++ +||+.| |+ +|+...
T Consensus 976 ~VfaGdSGntD~e~Ll~G~ 994 (1050)
T TIGR02468 976 AVFVGESGDTDYEGLLGGL 994 (1050)
T ss_pred EEEeccCCCCCHHHHhCCc
Confidence 55 999999 94 455443
No 13
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=100.00 E-value=9.5e-32 Score=281.96 Aligned_cols=249 Identities=32% Similarity=0.467 Sum_probs=214.3
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceE
Q 002979 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgli 655 (861)
....+.+.|.++++++|++||||||++... ....++++++++|++|+++.++.|+|+|||+...++.|++ +++++++
T Consensus 5 ~~~~~~~~~~~a~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSGR~~~~l~~~~~-v~~i~l~ 83 (266)
T COG1877 5 QSNQLLEPYLNARKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISGRSLAELERLFG-VPGIGLI 83 (266)
T ss_pred hhhhhccccccccceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeCCCHHHHHHhcC-CCCccEE
Confidence 445677889999999999999999998543 3556889999999999999999999999999999999998 7899999
Q ss_pred ecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHh
Q 002979 656 AEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVL 735 (861)
Q Consensus 656 aenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l 735 (861)
|+||++++...+..|..........|++.+..+++.|++++||+++|.|+.++.|||++++++....++.......
T Consensus 84 aehGa~~r~~~g~~~~~~~~~~~~~~~~~v~~~l~~~v~r~pGs~iE~K~~a~~~Hyr~a~~~~~~~~a~~~~~~~---- 159 (266)
T COG1877 84 AEHGAEVRDPNGKWWINLAEEADLRWLKEVAAILEYYVERTPGSYIERKGFAVALHYRNAEDDEGAALALAEAATL---- 159 (266)
T ss_pred EecceEEecCCCCeeEecCHHHHhhHHHHHHHHHHHHhhcCCCeEEEEcCcEEEEeeccCCchhhHHHHHHHHHhc----
Confidence 9999999988888888887778889999999999999999999999999999999999997754433322222211
Q ss_pred cCCC-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEE
Q 002979 736 ANEP-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT 814 (861)
Q Consensus 736 ~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (861)
.+.. +.+..|+..||++|.++|||.++++++++. ....++++|.|||.+|++||++++... .++|.
T Consensus 160 ~~~~~~~v~~gk~vVEvrp~~~~KG~a~~~i~~~~---~~~~~~~~~aGDD~TDE~~F~~v~~~~----------~~~v~ 226 (266)
T COG1877 160 INELKLRVTPGKMVVELRPPGVSKGAAIKYIMDEL---PFDGRFPIFAGDDLTDEDAFAAVNKLD----------SITVK 226 (266)
T ss_pred cccccEEEEeCceEEEEeeCCcchHHHHHHHHhcC---CCCCCcceecCCCCccHHHHHhhccCC----------CceEE
Confidence 1222 889999999999999999999999999987 555568999999999999999998631 26899
Q ss_pred eCCCCcccceecCCHhHHHHHHHHHHhhcC
Q 002979 815 VGRKPSKAKYYLDDATDVLKLLQGLATASS 844 (861)
Q Consensus 815 vG~~~s~Aky~l~d~~eV~~~L~~L~~~~~ 844 (861)
+|.+.+.|++.+.+.......|.++.....
T Consensus 227 v~~~~t~a~~~~~~~~~~~~~l~~~~~~~~ 256 (266)
T COG1877 227 VGVGSTQAKFRLAGVYGFLRSLYKLLEALG 256 (266)
T ss_pred ecCCcccccccccccHHHHHHHHHHHHHhh
Confidence 999999999999999999998888887664
No 14
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=99.98 E-value=4.4e-31 Score=280.22 Aligned_cols=237 Identities=28% Similarity=0.411 Sum_probs=195.6
Q ss_pred ccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCC
Q 002979 589 TERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNK 666 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~ 666 (861)
+++++|+|||||||++..+ ....+++++.++|++|++++++.|+|+|||+...+...+ .+++++++++||++++.++
T Consensus 1 ~~~~~l~lD~DGTL~~~~~~p~~~~~~~~~~~~L~~L~~~~~~~v~ivSGR~~~~~~~~~-~~~~~~l~g~hG~~~~~~g 79 (244)
T TIGR00685 1 ARKRAFFFDYDGTLSEIVPDPDAAVVSDRLLTILQKLAARPHNAIWIISGRKFLEKWLGV-KLPGLGLAGEHGCEMKDNG 79 (244)
T ss_pred CCcEEEEEecCccccCCcCCCcccCCCHHHHHHHHHHHhCCCCeEEEEECCChhhccccC-CCCceeEEeecCEEEecCC
Confidence 4679999999999998532 345678999999999999999999999999988887665 3467899999999998744
Q ss_pred cc-eEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccC-CccchhccHHHHHHHHHHHhcCCCEEEEE
Q 002979 667 TS-EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDA-DPDFGSCQAKELLDHLESVLANEPAVVKR 744 (861)
Q Consensus 667 ~~-~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~-d~~~~~~~a~el~~~L~~~l~~~~~~v~~ 744 (861)
.. .|... ......|++.+.++++.+.++ ||+++|.|+.++.|||+.+ +++.+..++.++..++. ...++.+..
T Consensus 80 ~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~-pG~~iE~K~~s~~~hyr~a~d~~~~~~~~~~~~~~~~---~~~~~~v~~ 154 (244)
T TIGR00685 80 SCQDWVNL-TEKIPSWKVRANELREEITTR-PGVFIERKGVALAWHYRQAPVPELARFRAKELKEKIL---SFTDLEVMD 154 (244)
T ss_pred Ccceeeec-hhhhhhHHHHHHHHHHHHhcC-CCcEEEecceEEEEEeccCCCcHHHHHHHHHHHHHHh---cCCCEEEEE
Confidence 33 35443 222247888899999888887 9999999999999999998 77777666666666653 334688899
Q ss_pred cCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe--CCCCccc
Q 002979 745 GQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV--GRKPSKA 822 (861)
Q Consensus 745 g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v--G~~~s~A 822 (861)
++.++|++|.++|||.+++++++++ ++.++++++|||+.||++||+.+... ......++++| |..++.|
T Consensus 155 g~~~~e~~p~~~~Kg~a~~~~~~~~---~~~~~~~i~iGD~~~D~~~~~~~~~~------~~~~g~~~v~v~~g~~~~~A 225 (244)
T TIGR00685 155 GKAVVELKPRFVNKGEIVKRLLWHQ---PGSGISPVYLGDDITDEDAFRVVNNQ------WGNYGFYPVPIGSGSKKTVA 225 (244)
T ss_pred CCeEEEEeeCCCCHHHHHHHHHHhc---ccCCCceEEEcCCCcHHHHHHHHhcc------cCCCCeEEEEEecCCcCCCc
Confidence 9999999999999999999999999 88889999999999999999999321 00112367888 8888999
Q ss_pred ceecCCHhHHHHHHHHHH
Q 002979 823 KYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 823 ky~l~d~~eV~~~L~~L~ 840 (861)
+|+++++++|..+|+.|+
T Consensus 226 ~~~~~~~~~v~~~L~~l~ 243 (244)
T TIGR00685 226 KFHLTGPQQVLEFLGLLV 243 (244)
T ss_pred eEeCCCHHHHHHHHHHHh
Confidence 999999999999999886
No 15
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=99.98 E-value=4e-32 Score=286.68 Aligned_cols=227 Identities=42% Similarity=0.685 Sum_probs=155.1
Q ss_pred EecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEe
Q 002979 595 FLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWET 672 (861)
Q Consensus 595 ~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~ 672 (861)
||||||||.+..+ ....++++++++|++||+++++.|+|+|||+...+..+ ..+++++++++||++++.+++..|..
T Consensus 1 ~lDyDGTL~p~~~~p~~~~~~~~~~~~L~~La~~~~~~v~IvSGR~~~~~~~~-~~~~~i~l~gehG~e~~~~~~~~~~~ 79 (235)
T PF02358_consen 1 FLDYDGTLAPIVDDPDAAVPPPELRELLRALAADPNNTVAIVSGRSLDDLERF-GGIPNIGLAGEHGAEIRRPGGSEWTN 79 (235)
T ss_dssp EEE-TTTSS---S-GGG----HHHHHHHHHHHHHSE--EEEE-SS-HHHHHHH--S-SS-EEEEGGGTEEEETTE-EEE-
T ss_pred CcccCCccCCCCCCccccCCCHHHHHHHHHHhccCCCEEEEEEeCCHHHhHHh-cCCCCceEEEEeeEEeccCccccccc
Confidence 7999999999654 34578899999999999999999999999999995554 46789999999999999999888887
Q ss_pred cCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC-CEEEEEcCeEEEE
Q 002979 673 NHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE-PAVVKRGQHIVEV 751 (861)
Q Consensus 673 ~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~-~~~v~~g~~~vEI 751 (861)
........|++.+.++++.|.++++|+++|.|++++.|||+.++++++..++.++.+++.+.+... ++.+..|+..+||
T Consensus 80 ~~~~~~~~~~~~~~~~l~~~~~~~pG~~iE~K~~sv~~Hyr~~~~~~~~~~~~~l~~~l~~~~~~~~~~~v~~g~~~vEv 159 (235)
T PF02358_consen 80 LPADEDLEWKDEVREILEYFAERTPGSFIEDKEFSVAFHYRNAPPEFGEAQARELAEQLREILASHPGLEVVPGKKVVEV 159 (235)
T ss_dssp TTGGGGHHHHHHHHHHHTTHHHHSTT-EEEEETTEEEEE-TTS-ST----THHHHHHHHHHHHHHH-T-EEEE-SSEEEE
T ss_pred cccccchHHHHHHHHHHHHHHhhccCcEEEECCeEEEEEecCCCcchhhhHHHHHHHHHHHHHHhCCCEEEEECCCEEEE
Confidence 666677889999999999999999999999999999999999999999889999999999877765 7999999999999
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-----CCCcccceec
Q 002979 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-----RKPSKAKYYL 826 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-----~~~s~Aky~l 826 (861)
+|.+++||.|+++|++.+...+..+++++|+|||.+||+||+++.... ..-+++.|| .++|.|+|++
T Consensus 160 rp~~~~KG~av~~ll~~~~~~~~~~~~~l~~GDD~tDE~~f~~~~~~~--------~~~~~i~V~~~~~~~~~t~A~y~l 231 (235)
T PF02358_consen 160 RPPGVNKGSAVRRLLEELPFAGPKPDFVLYIGDDRTDEDAFRALRELE--------EGGFGIKVGSVSVGEKPTAASYRL 231 (235)
T ss_dssp E-TT--HHHHHHHHHTTS---------EEEEESSHHHHHHHHTTTTS------------EEEEES---------------
T ss_pred EeCCCChHHHHHHHHHhcCccccccceeEEecCCCCCHHHHHHHHhcc--------cCCCCeEEEeeccccccccccccc
Confidence 999999999999999988222233789999999999999999998631 012455555 4579999999
Q ss_pred CCHh
Q 002979 827 DDAT 830 (861)
Q Consensus 827 ~d~~ 830 (861)
+|+.
T Consensus 232 ~~p~ 235 (235)
T PF02358_consen 232 DDPS 235 (235)
T ss_dssp ----
T ss_pred ccCC
Confidence 9873
No 16
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.98 E-value=7.7e-31 Score=281.08 Aligned_cols=232 Identities=21% Similarity=0.252 Sum_probs=186.7
Q ss_pred ceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcc
Q 002979 591 RRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTS 668 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~ 668 (861)
.++|++||||||++..+ .+..++++++++|++|++++|+.|+|+|||+...+.++++.+ .+.++++||++++..++.
T Consensus 14 ~~li~~D~DGTLl~~~~~p~~~~i~~~~~~~L~~L~~~~g~~v~i~SGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~ 92 (266)
T PRK10187 14 NYAWFFDLDGTLAEIKPHPDQVVVPDNILQGLQLLATANDGALALISGRSMVELDALAKPY-RFPLAGVHGAERRDINGK 92 (266)
T ss_pred CEEEEEecCCCCCCCCCCcccccCCHHHHHHHHHHHhCCCCcEEEEeCCCHHHHHHhcCcc-cceEEEeCCCeeecCCCC
Confidence 57999999999998432 356789999999999965589999999999999999999765 467999999999876554
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhc-CC-CEEEEEcC
Q 002979 669 EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA-NE-PAVVKRGQ 746 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~-~~-~~~v~~g~ 746 (861)
.+... ...+|.+.+...++.+..+++|+++|.|+..+.+||+.++. ..+.+..+.+.+. .. ...+.+|+
T Consensus 93 ~~~~~---l~~~~~~~i~~~l~~~~~~~pg~~ve~k~~~~~~h~r~~~~------~~~~~~~l~~~i~~~~~~~~~~~g~ 163 (266)
T PRK10187 93 THIVH---LPDAIARDISVQLHTALAQLPGAELEAKGMAFALHYRQAPQ------HEDALLALAQRITQIWPQLALQPGK 163 (266)
T ss_pred eeecc---CChhHHHHHHHHHHHHhccCCCcEEEeCCcEEEEECCCCCc------cHHHHHHHHHHHHhhCCceEEeCCC
Confidence 33322 23345454555566667888999999999999999987632 1233333432222 22 36677899
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceec
Q 002979 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYL 826 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l 826 (861)
.++||+|+++|||.|++++++++ |+..+++++|||+.||++||+.+... ..++|+||++.+.|+|++
T Consensus 164 ~~lEi~p~g~~Kg~al~~ll~~~---~~~~~~v~~~GD~~nD~~mf~~~~~~----------~g~~vavg~a~~~A~~~l 230 (266)
T PRK10187 164 CVVEIKPRGTNKGEAIAAFMQEA---PFAGRTPVFVGDDLTDEAGFAVVNRL----------GGISVKVGTGATQASWRL 230 (266)
T ss_pred EEEEeeCCCCCHHHHHHHHHHhc---CCCCCeEEEEcCCccHHHHHHHHHhc----------CCeEEEECCCCCcCeEeC
Confidence 99999999999999999999999 99999999999999999999999431 016999999999999999
Q ss_pred CCHhHHHHHHHHHHhhcCC
Q 002979 827 DDATDVLKLLQGLATASSS 845 (861)
Q Consensus 827 ~d~~eV~~~L~~L~~~~~~ 845 (861)
+++++|..+|+.|+.....
T Consensus 231 ~~~~~v~~~L~~l~~~~~~ 249 (266)
T PRK10187 231 AGVPDVWSWLEMITTAQQQ 249 (266)
T ss_pred CCHHHHHHHHHHHHHhhhc
Confidence 9999999999999987664
No 17
>PLN03017 trehalose-phosphatase
Probab=99.97 E-value=2.1e-30 Score=282.16 Aligned_cols=245 Identities=25% Similarity=0.323 Sum_probs=194.9
Q ss_pred HHHhccceEEEecCCccccCCCC-CCC-CCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEE
Q 002979 585 AYRKTERRAIFLDYDGTVVPETS-IIK-SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI 662 (861)
Q Consensus 585 ~y~~s~~klI~~DlDGTLl~~~~-~~~-~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i 662 (861)
++.+.+..+||+||||||++..+ .++ .+++++.++|++|+ +++.|+|+|||++..+.++++ +..++++++||+.+
T Consensus 105 ~~~~~k~~llflD~DGTL~Piv~~p~~a~i~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-l~~l~l~g~hGa~i 181 (366)
T PLN03017 105 EASRGKQIVMFLDYDGTLSPIVDDPDKAFMSSKMRRTVKKLA--KCFPTAIVTGRCIDKVYNFVK-LAELYYAGSHGMDI 181 (366)
T ss_pred HHhcCCCeEEEEecCCcCcCCcCCcccccCCHHHHHHHHHHh--cCCcEEEEeCCCHHHHHHhhc-ccCceEEEcCCcEE
Confidence 34456789999999999996543 333 79999999999994 679999999999999999964 35688999999999
Q ss_pred EeCCcceEEe------cCCccChHHHHHHHHH---HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHH
Q 002979 663 RWNKTSEWET------NHLGADLEWKKIVEPV---MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLES 733 (861)
Q Consensus 663 ~~~~~~~~~~------~~~~~~~~w~~~v~~i---~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~ 733 (861)
+.+++..+.. ........|...+.++ +..++++++|+++|.|+.++.|||+.+++.. +.++..++.+
T Consensus 182 ~~p~~~~~~~~~~~~~~~~~~~~~~~~~i~~v~~~L~~~~~~~pGa~VE~K~~~vavHyR~ad~~~----~~~l~~~~~~ 257 (366)
T PLN03017 182 KGPAKGFSRHKRVKQSLLYQPANDYLPMIDEVYRQLLEKTKSTPGAKVENHKFCASVHFRCVDEKK----WSELVLQVRS 257 (366)
T ss_pred ecCCCcceeccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEcCcCCHHH----HHHHHHHHHH
Confidence 8765422111 0111233476666666 5567788999999999999999999997742 4567777777
Q ss_pred HhcCCC-EEEEEcCeEEEEecC-CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceE
Q 002979 734 VLANEP-AVVKRGQHIVEVKPQ-GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIF 811 (861)
Q Consensus 734 ~l~~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~ 811 (861)
.+.+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+....+++|||||.+||+||+.+.... ..+
T Consensus 258 vl~~~~~l~v~~GkkVlEvRP~~~~dKG~Av~~LL~~l~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~ 328 (366)
T PLN03017 258 VLKNFPTLKLTQGRKVFEIRPMIEWDKGKALEFLLESLGFGNTNNVFPVYIGDDRTDEDAFKMLRDRG---------EGF 328 (366)
T ss_pred HHHhCCCcEEeCCCeEEEecCCCCCCHHHHHHHHHHhcccccCCCceEEEeCCCCccHHHHHHHhhcC---------Cce
Confidence 777766 789999999999995 999999999999998222222568999999999999999996421 137
Q ss_pred EEEeC--CCCcccceecCCHhHHHHHHHHHHhhcCC
Q 002979 812 ACTVG--RKPSKAKYYLDDATDVLKLLQGLATASSS 845 (861)
Q Consensus 812 av~vG--~~~s~Aky~l~d~~eV~~~L~~L~~~~~~ 845 (861)
+|.|| .+++.|+|+++++++|.++|+.|+.....
T Consensus 329 gI~VG~~~k~T~A~y~L~dp~eV~~fL~~L~~~~~~ 364 (366)
T PLN03017 329 GILVSKFPKDTDASYSLQDPSEVMDFLARLVEWKQM 364 (366)
T ss_pred EEEECCCCCCCcceEeCCCHHHHHHHHHHHHHHHhh
Confidence 99999 57899999999999999999999987554
No 18
>PLN02580 trehalose-phosphatase
Probab=99.97 E-value=3.6e-30 Score=282.96 Aligned_cols=243 Identities=27% Similarity=0.354 Sum_probs=189.7
Q ss_pred HHHHhccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002979 584 SAYRKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
.+|.+++.+++||||||||++... ....++++++++|++|++. ..|+|+|||+...+.++++. ..++++++||+.
T Consensus 112 ~~~~~~k~~~LfLDyDGTLaPIv~~Pd~A~~s~~~~~aL~~La~~--~~VAIVSGR~~~~L~~~l~~-~~l~laGsHG~e 188 (384)
T PLN02580 112 ANFAKGKKIALFLDYDGTLSPIVDDPDRALMSDAMRSAVKNVAKY--FPTAIISGRSRDKVYELVGL-TELYYAGSHGMD 188 (384)
T ss_pred HHHhhcCCeEEEEecCCccCCCCCCcccccCCHHHHHHHHHHhhC--CCEEEEeCCCHHHHHHHhCC-CCccEEEeCCce
Confidence 478999999999999999998553 4556899999999999654 47999999999999999974 478999999999
Q ss_pred EEeCCc----ceEEecC------------CccChHHHHHHHHHHHH---HhhcCCCceEeeccceeEeeeccCCccchhc
Q 002979 662 IRWNKT----SEWETNH------------LGADLEWKKIVEPVMRS---YTEATDGSNIEIKESALVWHHQDADPDFGSC 722 (861)
Q Consensus 662 i~~~~~----~~~~~~~------------~~~~~~w~~~v~~i~~~---y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~ 722 (861)
++.+.+ ..|.... ......|...+.++++. ++++++|+++|.|+.++.|||+.+++++...
T Consensus 189 ~~~p~~~~~~~~~~~~~~~~~~~g~~~~~~~~a~~~~~~i~~v~~~l~e~~~~~pGs~VE~K~~svavHYR~a~~~~~~~ 268 (384)
T PLN02580 189 IMGPVRESVSNDHPNCIKSTDQQGKEVNLFQPASEFLPMIDEVFRSLVESTKDIKGAKVENHKFCVSVHYRNVDEKNWPL 268 (384)
T ss_pred eecCCCCcccccccccccccccccccccccccchhhhhhHHHHHHHHHHHhccCCCCEEEecCcEEEEEeCCCCchHHHH
Confidence 986422 1122211 01134577666666555 5667799999999999999999998876443
Q ss_pred cHHHHHHHHHHHhcCCC-EEEEEcCeEEEEec-CCCCHHHHHHHHHHHhhcCCCCCC-e--EEEEeCCcchHHHHHHccc
Q 002979 723 QAKELLDHLESVLANEP-AVVKRGQHIVEVKP-QGVSKGLVAEKVLVRMFNGGRPPD-F--VMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 723 ~a~el~~~L~~~l~~~~-~~v~~g~~~vEI~p-~gvsKg~al~~ll~~l~~~gi~~d-~--vlaiGD~~ND~~Mf~~ag~ 797 (861)
++.++. ..+.+.+ +.+..|+.++||+| .++|||.|++++++++ |+..+ + ++||||+.||++||+.+..
T Consensus 269 ~~~~l~----~~l~~~~~l~v~~Gk~vlEVrP~~g~~KG~Av~~Ll~~~---g~~~~d~~~pi~iGDD~TDedmF~~L~~ 341 (384)
T PLN02580 269 VAQCVH----DVLKKYPRLRLTHGRKVLEVRPVIDWNKGKAVEFLLESL---GLSNCDDVLPIYIGDDRTDEDAFKVLRE 341 (384)
T ss_pred HHHHHH----HHHHhCCceEEEeCCeEEEEecCCCCCHHHHHHHHHHhc---CCCcccceeEEEECCCchHHHHHHhhhc
Confidence 334343 3344444 78889999999999 5999999999999998 77654 3 4999999999999998753
Q ss_pred cCCCCCCCCCCceEEEEeCC--CCcccceecCCHhHHHHHHHHHHhhcCC
Q 002979 798 TVSGPSLPVPPEIFACTVGR--KPSKAKYYLDDATDVLKLLQGLATASSS 845 (861)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~--~~s~Aky~l~d~~eV~~~L~~L~~~~~~ 845 (861)
.. ..++|+||+ +.+.|+|+++++++|.++|+.|+.....
T Consensus 342 ~~---------~G~~I~Vgn~~~~t~A~y~L~dp~eV~~~L~~L~~~~~~ 382 (384)
T PLN02580 342 GN---------RGYGILVSSVPKESNAFYSLRDPSEVMEFLKSLVTWKKS 382 (384)
T ss_pred cC---------CceEEEEecCCCCccceEEcCCHHHHHHHHHHHHHhhhc
Confidence 11 014666665 6899999999999999999999986543
No 19
>PLN02151 trehalose-phosphatase
Probab=99.97 E-value=5.5e-30 Score=278.26 Aligned_cols=243 Identities=24% Similarity=0.365 Sum_probs=194.2
Q ss_pred HhccceEEEecCCccccCCCC--CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEe
Q 002979 587 RKTERRAIFLDYDGTVVPETS--IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRW 664 (861)
Q Consensus 587 ~~s~~klI~~DlDGTLl~~~~--~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~ 664 (861)
.+.+..+||+||||||++... ....++++++++|++|+ ++..|+|+|||+...+..+++ ++.++++++||+.++.
T Consensus 94 ~~~~~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La--~~~~vaIvSGR~~~~l~~~~~-~~~l~laGsHG~e~~~ 170 (354)
T PLN02151 94 SEGKQIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLA--KCFPTAIVSGRCREKVSSFVK-LTELYYAGSHGMDIKG 170 (354)
T ss_pred hcCCceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHh--cCCCEEEEECCCHHHHHHHcC-CccceEEEeCCceeec
Confidence 456778999999999997543 34478999999999996 457999999999999999996 4578999999999987
Q ss_pred CC-cceEEec----CCccChHHHHHHHHHHHHH---hhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhc
Q 002979 665 NK-TSEWETN----HLGADLEWKKIVEPVMRSY---TEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLA 736 (861)
Q Consensus 665 ~~-~~~~~~~----~~~~~~~w~~~v~~i~~~y---~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~ 736 (861)
++ +..|+.. .......|...+.++++.+ +.++||+++|.|++++.|||+.++++ +..++.+++.+.+.
T Consensus 171 p~~g~~~~~~~~~~~~~~~~~~~~~i~~v~~~l~~~~~~~pG~~VE~K~~slavHYR~a~~~----~~~~l~~~l~~v~~ 246 (354)
T PLN02151 171 PEQGSKYKKENQSLLCQPATEFLPVINEVYKKLVEKTKSIPGAKVENNKFCASVHFRCVEEN----KWSDLANQVRSVLK 246 (354)
T ss_pred CCCCccccccccccccccchhhHHHHHHHHHHHHHHHhcCCCCEEEecCcEEEEEeCCCChH----HHHHHHHHHHHHHh
Confidence 63 3455321 1123456888777776655 47789999999999999999999774 23566677777777
Q ss_pred CCC-EEEEEcCeEEEEecC-CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEE
Q 002979 737 NEP-AVVKRGQHIVEVKPQ-GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACT 814 (861)
Q Consensus 737 ~~~-~~v~~g~~~vEI~p~-gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~ 814 (861)
+.+ +.+..|+..+||+|. ++|||.|+++|++.+...+...++++|||||.+||+||+.+.... ..+++.
T Consensus 247 ~~~~l~v~~GkkVvEvrP~~~~dKG~Av~~Ll~~~~~~~~~~~~pvyiGDD~TDEDaF~~L~~~~---------~G~gI~ 317 (354)
T PLN02151 247 NYPKLMLTQGRKVLEIRPIIKWDKGKALEFLLESLGYANCTDVFPIYIGDDRTDEDAFKILRDKK---------QGLGIL 317 (354)
T ss_pred hCCCcEEecCCEEEEEeCCCCCCHHHHHHHHHHhcccccCCCCeEEEEcCCCcHHHHHHHHhhcC---------CCccEE
Confidence 766 789999999999996 999999999999987222233457999999999999999986421 015777
Q ss_pred eC--CCCcccceecCCHhHHHHHHHHHHhhcCC
Q 002979 815 VG--RKPSKAKYYLDDATDVLKLLQGLATASSS 845 (861)
Q Consensus 815 vG--~~~s~Aky~l~d~~eV~~~L~~L~~~~~~ 845 (861)
|| .+++.|+|+++++++|.++|+.|+.....
T Consensus 318 Vg~~~k~T~A~y~L~dp~eV~~~L~~L~~~~~~ 350 (354)
T PLN02151 318 VSKYAKETNASYSLQEPDEVMEFLERLVEWKQL 350 (354)
T ss_pred eccCCCCCcceEeCCCHHHHHHHHHHHHHhhhc
Confidence 77 67899999999999999999999976543
No 20
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.94 E-value=1.1e-25 Score=242.08 Aligned_cols=225 Identities=19% Similarity=0.225 Sum_probs=159.8
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC-ceEecCcEEEEeCCcc
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWNKTS 668 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l-gliaenG~~i~~~~~~ 668 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||+...+.+++..+.-. .++++||++|.+.+..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~~-~~~g~~v~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 77 (264)
T COG0561 2 MIKLLAFDLDGTLLD---SNKTISPETKEALARL-REKGVKVVLATGRPLPDVLSILEELGLDGPLITFNGALIYNGGEL 77 (264)
T ss_pred CeeEEEEcCCCCccC---CCCccCHHHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHHcCCCccEEEeCCeEEecCCcE
Confidence 679999999999999 7888999999999998 8999999999999999999999887544 5999999999999665
Q ss_pred eEEecCCccChHHHHHHHHHHHHHhhc--CCCceEeeccc------------eeEe-----eeccC---Cc--cchh---
Q 002979 669 EWETNHLGADLEWKKIVEPVMRSYTEA--TDGSNIEIKES------------ALVW-----HHQDA---DP--DFGS--- 721 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~~v~~i~~~y~~~--~~gs~ie~k~~------------~l~~-----~~~~~---d~--~~~~--- 721 (861)
.+....+ .+.+..+++..... ....+...... .... ..... +. .+..
T Consensus 78 i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (264)
T COG0561 78 LFQKPLS------REDVEELLELLEDFQGIALVLYTDDGIYLTKKRGTFAEARIGFANLSPVGREAAELEDNKIIALDKD 151 (264)
T ss_pred EeeecCC------HHHHHHHHHHHHhccCceEEEEeccceeeccCCCcccccccccccccccccchhhcCcceEEEEecC
Confidence 5555443 33344444433221 00011110000 0000 00000 00 0011
Q ss_pred -ccHHHHHHHHHHHhcCCCEEEEEcCe-EEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccC
Q 002979 722 -CQAKELLDHLESVLANEPAVVKRGQH-IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTV 799 (861)
Q Consensus 722 -~~a~el~~~L~~~l~~~~~~v~~g~~-~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (861)
....++.+.+.+.+......+.++.. ++||+|+|+|||.|++++++++ |+++++|+||||+.||++||+.+|.
T Consensus 152 ~~~~~~~~~~l~~~~~~~~~~~~~s~~~~lei~~~g~~K~~al~~l~~~l---gi~~~~v~afGD~~ND~~Ml~~ag~-- 226 (264)
T COG0561 152 HEILEELVEALRKRFPDLGLTVSSSGPISLDITPKGVSKGYALQRLAKLL---GIKLEEVIAFGDSTNDIEMLEVAGL-- 226 (264)
T ss_pred hHhHHHHHHHHhhhccccceEEEEcCCceEEEecCCCchHHHHHHHHHHh---CCCHHHeEEeCCccccHHHHHhcCe--
Confidence 12233444454444444455555555 4999999999999999999999 9999999999999999999999996
Q ss_pred CCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHHHHHh
Q 002979 800 SGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQGLAT 841 (861)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~~L~~ 841 (861)
+|+|||+ +..|++++ ++.++|.+.|+.+..
T Consensus 227 ------------gvam~Na~~~~k~~A~~vt~~n~~~Gv~~~l~~~~~ 262 (264)
T COG0561 227 ------------GVAMGNADEELKELADYVTTSNDEDGVAEALEKLLL 262 (264)
T ss_pred ------------eeeccCCCHHHHhhCCcccCCccchHHHHHHHHHhc
Confidence 7889987 36777664 457889999998754
No 21
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.94 E-value=1.6e-25 Score=241.80 Aligned_cols=225 Identities=17% Similarity=0.169 Sum_probs=154.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEe-CCc
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRW-NKT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~-~~~ 667 (861)
|+|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||+...+.+++..+. ..++++.||+.|.. .+.
T Consensus 1 m~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~I~~~~~~ 76 (272)
T PRK15126 1 MARLAAFDMDGTLLM---PDHHLGEKTLSTLARL-RERDITLTFATGRHVLEMQHILGALSLDAYLITGNGTRVHSLEGE 76 (272)
T ss_pred CccEEEEeCCCcCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHcCCCCcEEecCCcEEEcCCCC
Confidence 478999999999999 7888999999999999 79999999999999999999987764 23579999999985 444
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeeccc---------eeEeeecc---C-Cccch---h--
Q 002979 668 SEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKES---------ALVWHHQD---A-DPDFG---S-- 721 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~---------~l~~~~~~---~-d~~~~---~-- 721 (861)
..+...++. +.+..+++..... ..+.+...... ...+...+ . ...+. .
T Consensus 77 ~l~~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~ 150 (272)
T PRK15126 77 LLHRQDLPA------DVAELVLHQQWDTRASMHVFNDDGWFTGKEIPALLQAHVYSGFRYQLIDLKRLPAHGVTKICFCG 150 (272)
T ss_pred EEEeecCCH------HHHHHHHHHhhhcCcEEEEEcCCeEEecCCcHHHHHHHHhcCCceEEecHHHccccCceEEEEEC
Confidence 445544432 2333333222111 01111110000 00000000 0 00000 0
Q ss_pred --ccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccC
Q 002979 722 --CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTV 799 (861)
Q Consensus 722 --~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (861)
....++.+.+.+.+......+.++..++||.|+++|||.|+++|++++ |+++++++||||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~g~sKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml~~ag~-- 225 (272)
T PRK15126 151 DHDDLTRLQIQLNEALGERAHLCFSATDCLEVLPVGCNKGAALAVLSQHL---GLSLADCMAFGDAMNDREMLGSVGR-- 225 (272)
T ss_pred CHHHHHHHHHHHHHHhcCCEEEEEcCCcEEEeecCCCChHHHHHHHHHHh---CCCHHHeEEecCCHHHHHHHHHcCC--
Confidence 112233334444443333344566789999999999999999999999 9999999999999999999999996
Q ss_pred CCCCCCCCCceEEEEeCCC----Ccccce--ec--CCHhHHHHHHHHHHh
Q 002979 800 SGPSLPVPPEIFACTVGRK----PSKAKY--YL--DDATDVLKLLQGLAT 841 (861)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~Aky--~l--~d~~eV~~~L~~L~~ 841 (861)
+|+|||+ +..|+| ++ ++.++|.++|+++..
T Consensus 226 ------------~vAm~Na~~~vK~~A~~~~v~~~n~edGva~~l~~~~~ 263 (272)
T PRK15126 226 ------------GFIMGNAMPQLRAELPHLPVIGHCRNQAVSHYLTHWLD 263 (272)
T ss_pred ------------ceeccCChHHHHHhCCCCeecCCCcchHHHHHHHHHhc
Confidence 7888887 356665 44 357889999999873
No 22
>PRK10976 putative hydrolase; Provisional
Probab=99.93 E-value=1.8e-25 Score=240.52 Aligned_cols=224 Identities=17% Similarity=0.201 Sum_probs=152.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC-CceEecCcEEEEeC-Cc
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LGIAAEHGYFIRWN-KT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-lgliaenG~~i~~~-~~ 667 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||++..+.+++..+.. .++|+.||+.|... +.
T Consensus 1 mikli~~DlDGTLl~---~~~~is~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~~~~~~ 76 (266)
T PRK10976 1 MYQVVASDLDGTLLS---PDHTLSPYAKETLKLL-TARGIHFVFATGRHHVDVGQIRDNLEIKSYMITSNGARVHDTDGN 76 (266)
T ss_pred CceEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCeEEEcCCcEEECCCCC
Confidence 368999999999999 7788999999999999 799999999999999999998877652 35799999999863 43
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhc---------CCCceEeeccce---------eEeeec---cCCc-cch---h-
Q 002979 668 SEWETNHLGADLEWKKIVEPVMRSYTEA---------TDGSNIEIKESA---------LVWHHQ---DADP-DFG---S- 721 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~---------~~gs~ie~k~~~---------l~~~~~---~~d~-~~~---~- 721 (861)
.++...++ .+.+.++++...+. ..+.++...... ..+... .... .+. .
T Consensus 77 ~i~~~~l~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~ 150 (266)
T PRK10976 77 LIFSHNLD------RDIASDLFGVVHDNPDIITNVYRDDEWFMNRHRPEEMRFFKEAVFKYQLYEPGLLEPDGVSKVFFT 150 (266)
T ss_pred EehhhcCC------HHHHHHHHHhhcccCCEEEEEEcCCeEEEcCCChHHHHHHHhcCCcceeechhhcccCCceEEEEE
Confidence 34444333 22333444332211 011111110000 000000 0000 000 0
Q ss_pred c----cHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 722 C----QAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 722 ~----~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
. ...++.+.+.+.+......+.++..++||.|+++|||.|++++++++ |+++++++||||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~l~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~l---gi~~~~viafGD~~NDi~Ml~~ag~ 227 (266)
T PRK10976 151 CDSHEKLLPLEQAINARWGDRVNVSFSTLTCLEVMAGGVSKGHALEAVAKKL---GYSLKDCIAFGDGMNDAEMLSMAGK 227 (266)
T ss_pred cCCHHHHHHHHHHHHHHhCCcEEEEEeCCceEEEEcCCCChHHHHHHHHHHc---CCCHHHeEEEcCCcccHHHHHHcCC
Confidence 0 11122333433333323344567789999999999999999999999 9999999999999999999999997
Q ss_pred cCCCCCCCCCCceEEEEeCCCC----cccc--eec--CCHhHHHHHHHHHH
Q 002979 798 TVSGPSLPVPPEIFACTVGRKP----SKAK--YYL--DDATDVLKLLQGLA 840 (861)
Q Consensus 798 ~~~~~~~~~~~~~~av~vG~~~----s~Ak--y~l--~d~~eV~~~L~~L~ 840 (861)
+|+|||+. ..|+ +++ ++.++|.+.|+++.
T Consensus 228 --------------~vAm~NA~~~vK~~A~~~~v~~~n~edGVa~~l~~~~ 264 (266)
T PRK10976 228 --------------GCIMGNAHQRLKDLLPELEVIGSNADDAVPHYLRKLY 264 (266)
T ss_pred --------------CeeecCCcHHHHHhCCCCeecccCchHHHHHHHHHHh
Confidence 68888873 5665 555 35788999999875
No 23
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.93 E-value=4.1e-25 Score=238.31 Aligned_cols=224 Identities=16% Similarity=0.198 Sum_probs=154.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC----CceEecCcEEEEe-
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM----LGIAAEHGYFIRW- 664 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~----lgliaenG~~i~~- 664 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||++..+..++..+.. .++|+.||+.|..
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~~~~I~~NGa~i~~~ 77 (270)
T PRK10513 2 AIKLIAIDMDGTLLL---PDHTISPAVKQAIAAA-RAKGVNVVLTTGRPYAGVHRYLKELHMEQPGDYCITNNGALVQKA 77 (270)
T ss_pred ceEEEEEecCCcCcC---CCCccCHHHHHHHHHH-HHCCCEEEEecCCChHHHHHHHHHhCCCCCCCeEEEcCCeEEEEC
Confidence 479999999999999 7788999999999999 799999999999999999998877642 2489999999986
Q ss_pred -CCcceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeeccce-----------eEeeecc---CCc--cc
Q 002979 665 -NKTSEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESA-----------LVWHHQD---ADP--DF 719 (861)
Q Consensus 665 -~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~-----------l~~~~~~---~d~--~~ 719 (861)
.+..++...++.. .+..+++...+. ..+.+...+... ....+.. .++ .+
T Consensus 78 ~~~~~i~~~~l~~~------~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (270)
T PRK10513 78 ADGETVAQTALSYD------DYLYLEKLSREVGVHFHALDRNTLYTANRDISYYTVHESFLTGIPLVFREVEKMDPNLQF 151 (270)
T ss_pred CCCCEEEecCCCHH------HHHHHHHHHHHcCCcEEEEECCEEEEecCCcchhHHHhhhhccCCccccchhhccccCCc
Confidence 3444565554432 222222221110 111222111100 0000000 000 00
Q ss_pred h---hc----cHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHH
Q 002979 720 G---SC----QAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMF 792 (861)
Q Consensus 720 ~---~~----~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf 792 (861)
. .. ...++.+.+.+.+......+.++..++||.|+|+|||.|++++++++ |+++++++||||+.||++||
T Consensus 152 ~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~eI~~~gvsKg~al~~l~~~~---gi~~~~v~afGD~~NDi~Ml 228 (270)
T PRK10513 152 PKVMMIDEPEILDAAIARIPAEVKERYTVLKSAPYFLEILDKRVNKGTGVKSLAEHL---GIKPEEVMAIGDQENDIAMI 228 (270)
T ss_pred eEEEEeCCHHHHHHHHHHhHHHhcCcEEEEEecCeeEEEeCCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHH
Confidence 0 00 11222233333332323345667789999999999999999999999 99999999999999999999
Q ss_pred HHccccCCCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHHHHHHH
Q 002979 793 ESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 793 ~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
+.+|. +|+|||+ +..|+|++. +.++|.++|+++.
T Consensus 229 ~~ag~--------------~vAm~NA~~~vK~~A~~vt~~n~~dGva~~i~~~~ 268 (270)
T PRK10513 229 EYAGV--------------GVAMGNAIPSVKEVAQFVTKSNLEDGVAFAIEKYV 268 (270)
T ss_pred HhCCc--------------eEEecCccHHHHHhcCeeccCCCcchHHHHHHHHh
Confidence 99996 7888887 477889874 5688999998874
No 24
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.92 E-value=5.9e-24 Score=229.39 Aligned_cols=225 Identities=15% Similarity=0.136 Sum_probs=150.3
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC--CceEecCcEEEEeCCc
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM--LGIAAEHGYFIRWNKT 667 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~--lgliaenG~~i~~~~~ 667 (861)
.+|+|++|+||||++ .++.++++++++|++| +++|+.|+|+|||+...+..++..+.- .++|++||+.|..++.
T Consensus 6 ~~~lI~~DlDGTLL~---~~~~i~~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~~~~l~~~~~~~I~~NGa~I~~~~~ 81 (271)
T PRK03669 6 DPLLIFTDLDGTLLD---SHTYDWQPAAPWLTRL-REAQVPVILCSSKTAAEMLPLQQTLGLQGLPLIAENGAVIQLDEQ 81 (271)
T ss_pred CCeEEEEeCccCCcC---CCCcCcHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHHhCCCCCcEEEeCCCEEEecCc
Confidence 478999999999999 6778899999999999 799999999999999999999877642 3589999999987643
Q ss_pred c-------eEEecCCccChHHHHHHHHHHHHHhhcCCCceEe--eccc-----eeEe-e-----eccCCc---cchhccH
Q 002979 668 S-------EWETNHLGADLEWKKIVEPVMRSYTEATDGSNIE--IKES-----ALVW-H-----HQDADP---DFGSCQA 724 (861)
Q Consensus 668 ~-------~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie--~k~~-----~l~~-~-----~~~~d~---~~~~~~a 724 (861)
. .+...++ .+.+..+++...+. .+..+. .... .... . ...... .+.....
T Consensus 82 ~~~~~~~~~~~~~l~------~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (271)
T PRK03669 82 WQDHPDFPRIISGIS------HGEIRQVLNTLREK-EGFKFTTFDDVDDATIAEWTGLSRSQAALARLHEASVTLIWRDS 154 (271)
T ss_pred ccCCCCceEeecCCC------HHHHHHHHHHHHHh-cCCceeecccCCHHHHHHHhCCCHHHHHHHhccccCceeEecCC
Confidence 1 2222222 22333333332211 010000 0000 0000 0 000000 0000001
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCC---CCCeEEEEeCCcchHHHHHHccccCCC
Q 002979 725 KELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGR---PPDFVMCVGDDRSDEDMFESILSTVSG 801 (861)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi---~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (861)
.+.+..+.+.+....+.+..+..++||.|+++|||.|++++++++ |+ ++++++||||+.||++||+.+|.
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~iEi~~~g~sKg~al~~l~~~l---gi~~~~~~~viafGDs~NDi~Ml~~ag~---- 227 (271)
T PRK03669 155 DERMAQFTARLAELGLQFVQGARFWHVLDASAGKDQAANWLIATY---QQLSGTRPTTLGLGDGPNDAPLLDVMDY---- 227 (271)
T ss_pred HHHHHHHHHHHHHCCCEEEecCeeEEEecCCCCHHHHHHHHHHHH---HhhcCCCceEEEEcCCHHHHHHHHhCCE----
Confidence 122233333333223444456678999999999999999999999 99 99999999999999999999996
Q ss_pred CCCCCCCceEEEEeCCCC----------cccceecC--CHhHHHHHHHHHHhh
Q 002979 802 PSLPVPPEIFACTVGRKP----------SKAKYYLD--DATDVLKLLQGLATA 842 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~~----------s~Aky~l~--d~~eV~~~L~~L~~~ 842 (861)
+|+||+.. ..|.|+++ +.+++.+.|+.+.++
T Consensus 228 ----------gvAM~~~~~~~~~l~~~~~~~~~~~~~~~~~g~~~~l~~~~~~ 270 (271)
T PRK03669 228 ----------AVVVKGLNREGVHLQDDDPARVYRTQREGPEGWREGLDHFFSA 270 (271)
T ss_pred ----------EEEecCCCCCCcccccccCCceEeccCCCcHHHHHHHHHHHhc
Confidence 78888532 15678776 467999999988764
No 25
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=99.92 E-value=4.5e-24 Score=240.80 Aligned_cols=301 Identities=15% Similarity=0.160 Sum_probs=207.8
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh
Q 002979 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL 253 (861)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll 253 (861)
...+..|..+++.++.++.+..++ |+||+||++.+.++...+. ...++.+++|.++.... . ..+..+.+.+.
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~~~~~--Dvv~~h~~~~~~~~~~~~~--~~~~~i~~~H~~~~~~~-~---~~~~~~~~~~~ 134 (372)
T cd03792 63 EEEKEIYLEWNEENAERPLLDLDA--DVVVIHDPQPLALPLFKKK--RGRPWIWRCHIDLSSPN-R---RVWDFLQPYIE 134 (372)
T ss_pred HHHHHHHHHHHHHHhccccccCCC--CEEEECCCCchhHHHhhhc--CCCeEEEEeeeecCCCc-H---HHHHHHHHHHH
Confidence 446788888888887764444444 9999999998877776653 36789999999885431 0 01123334445
Q ss_pred cCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--
Q 002979 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-- 331 (861)
Q Consensus 254 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-- 331 (861)
.+|.+.+.+.++++.++ ..+ .+ ++|+|||+...... +........+++++
T Consensus 135 ~~d~~i~~~~~~~~~~~----------------------~~~--~~-vipngvd~~~~~~~---~~~~~~~~~~~~~~~~ 186 (372)
T cd03792 135 DYDAAVFHLPEYVPPQV----------------------PPR--KV-IIPPSIDPLSGKNR---ELSPADIEYILEKYGI 186 (372)
T ss_pred hCCEEeecHHHhcCCCC----------------------CCc--eE-EeCCCCCCCccccC---CCCHHHHHHHHHHhCC
Confidence 67777766633221111 112 23 78999997532111 11122334455555
Q ss_pred -CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002979 332 -DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 332 -~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
.++++|++|||+++.||+..+++||+.+.+++|+++ |+.+|.+... .++..++.+++. ++.+ . ..
T Consensus 187 ~~~~~~i~~vgrl~~~Kg~~~ll~a~~~l~~~~~~~~----l~i~G~g~~~-~~~~~~~~~~~~---~~~~----~--~~ 252 (372)
T cd03792 187 DPERPYITQVSRFDPWKDPFGVIDAYRKVKERVPDPQ----LVLVGSGATD-DPEGWIVYEEVL---EYAE----G--DP 252 (372)
T ss_pred CCCCcEEEEEeccccccCcHHHHHHHHHHHhhCCCCE----EEEEeCCCCC-CchhHHHHHHHH---HHhC----C--CC
Confidence 478899999999999999999999999988888866 8888865421 122233322222 1111 1 11
Q ss_pred cEEEEcCC-CCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC
Q 002979 411 PVVLIDRP-VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS 489 (861)
Q Consensus 411 pvv~~~~~-v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~ 489 (861)
.++++... ++.+++.++|++||+|++||.+||||++++||||| +.|+|+|..+|..+.+.
T Consensus 253 ~v~~~~~~~~~~~~~~~~~~~ad~~v~~s~~Eg~g~~~lEA~a~-------------------G~Pvv~s~~~~~~~~i~ 313 (372)
T cd03792 253 DIHVLTLPPVSDLEVNALQRASTVVLQKSIREGFGLTVTEALWK-------------------GKPVIAGPVGGIPLQIE 313 (372)
T ss_pred CeEEEecCCCCHHHHHHHHHhCeEEEeCCCccCCCHHHHHHHHc-------------------CCCEEEcCCCCchhhcc
Confidence 24444433 48999999999999999999999999999999999 45699999999888773
Q ss_pred ---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHH
Q 002979 490 ---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (861)
Q Consensus 490 ---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 546 (861)
.|++++ +.+++|++|.+++++ +++++.+.++.++++ ..+++...++++++.+++
T Consensus 314 ~~~~g~~~~--~~~~~a~~i~~ll~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~~~~ 371 (372)
T cd03792 314 DGETGFLVD--TVEEAAVRILYLLRD-PELRRKMGANAREHVRENFLITRHLKDYLYLISK 371 (372)
T ss_pred cCCceEEeC--CcHHHHHHHHHHHcC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHh
Confidence 367776 467899999999984 455666677777776 468999999988876654
No 26
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.92 E-value=6.3e-24 Score=223.43 Aligned_cols=215 Identities=20% Similarity=0.225 Sum_probs=149.2
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeC--C
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWN--K 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~--~ 666 (861)
++|+|++|+||||++ .++.+++++.++|+++ +++|+.|+|+|||+...+.+++..++ ..+++++||+.+... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~ 77 (230)
T PRK01158 2 KIKAIAIDIDGTITD---KDRRLSLKAVEAIRKA-EKLGIPVILATGNVLCFARAAAKLIGTSGPVIAENGGVISVGFDG 77 (230)
T ss_pred ceeEEEEecCCCcCC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCcEEEecCeEEEEcCCC
Confidence 479999999999999 7788999999999999 79999999999999999998876664 335899999999875 3
Q ss_pred cceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccc--ee--EeeeccCCccchhccHHHHHHHHHHHhcCCCEEE
Q 002979 667 TSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKES--AL--VWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~--~l--~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 742 (861)
...+....+ ...+.+....+.|... ...+..... .. ...... ....++.+.+++ + ...+.+
T Consensus 78 ~~~~~~~~~----~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~l~~-~-~~~~~~ 142 (230)
T PRK01158 78 KRIFLGDIE----ECEKAYSELKKRFPEA--STSLTKLDPDYRKTEVALRRT-------VPVEEVRELLEE-L-GLDLEI 142 (230)
T ss_pred CEEEEcchH----HHHHHHHHHHHhcccc--ceeeecCCcccccceeeeccc-------ccHHHHHHHHHH-c-CCcEEE
Confidence 334443321 1222222222222111 001110000 00 000000 011223333332 2 122445
Q ss_pred EEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----
Q 002979 743 KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---- 818 (861)
Q Consensus 743 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (861)
..+..++|+.|+++|||.|++++++++ |++++++++|||+.||++||+.+|. +++|||+
T Consensus 143 ~~~~~~~ei~~~~~~Kg~al~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~v 205 (230)
T PRK01158 143 VDSGFAIHIKSPGVNKGTGLKKLAELM---GIDPEEVAAIGDSENDLEMFEVAGF--------------GVAVANADEEL 205 (230)
T ss_pred EecceEEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEECCchhhHHHHHhcCc--------------eEEecCccHHH
Confidence 555678999999999999999999999 9999999999999999999999986 6888886
Q ss_pred CcccceecC--CHhHHHHHHHHHH
Q 002979 819 PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 819 ~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
+..|+|++. +.++|.+.|+++.
T Consensus 206 k~~a~~v~~~n~~~Gv~~~l~~~~ 229 (230)
T PRK01158 206 KEAADYVTEKSYGEGVAEAIEHLL 229 (230)
T ss_pred HHhcceEecCCCcChHHHHHHHHh
Confidence 367888874 5678999998764
No 27
>PLN02887 hydrolase family protein
Probab=99.92 E-value=5.9e-24 Score=247.34 Aligned_cols=231 Identities=19% Similarity=0.214 Sum_probs=157.0
Q ss_pred HHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC---C------
Q 002979 582 IVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM---L------ 652 (861)
Q Consensus 582 ~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~---l------ 652 (861)
.++.|+ .++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+..++..+.. .
T Consensus 300 ~~~~~~-~~iKLIa~DLDGTLLn---~d~~Is~~t~eAI~kl-~ekGi~~vIATGR~~~~i~~~l~~L~l~~~~~~I~~~ 374 (580)
T PLN02887 300 SLRFYK-PKFSYIFCDMDGTLLN---SKSQISETNAKALKEA-LSRGVKVVIATGKARPAVIDILKMVDLAGKDGIISES 374 (580)
T ss_pred chhhhc-cCccEEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHhCcccccceEeec
Confidence 345554 4689999999999999 7889999999999999 799999999999999999988876531 1
Q ss_pred -ceEecCcEEEEeC-CcceEEecCCccChHHHHHHHHHHHHHhhc--------CCCceEeeccceeE-ee--ec------
Q 002979 653 -GIAAEHGYFIRWN-KTSEWETNHLGADLEWKKIVEPVMRSYTEA--------TDGSNIEIKESALV-WH--HQ------ 713 (861)
Q Consensus 653 -gliaenG~~i~~~-~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~--------~~gs~ie~k~~~l~-~~--~~------ 713 (861)
++|+.||+.|+.. +..++...++ .+.+..+++...+. .++.+......... ++ +.
T Consensus 375 ~p~I~~NGA~I~d~~g~~I~~~~L~------~e~v~eIi~~~~~~~i~~~~~~~d~~y~~~~~~~~~~~~~~~~~~~~~~ 448 (580)
T PLN02887 375 SPGVFLQGLLVYGRQGREIYRSNLD------QEVCREACLYSLEHKIPLIAFSQDRCLTLFDHPLVDSLHTIYHEPKAEI 448 (580)
T ss_pred ccEEeecCeEEEECCCcEEEEEeCC------HHHHHHHHHHHHHcCCeEEEEECCeEEEecCchHHHHHHHhhccccccc
Confidence 2456688888753 3344554444 23334444332211 11111110000000 00 00
Q ss_pred --cCC-----ccch---h-cc----HHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCe
Q 002979 714 --DAD-----PDFG---S-CQ----AKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDF 778 (861)
Q Consensus 714 --~~d-----~~~~---~-~~----a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~ 778 (861)
+.+ ..+. . .. ..++.+.+.+.+......+.++..++||.|+++|||.|+++|++++ |+++++
T Consensus 449 i~~l~~~~~~~~i~Ki~~~~~~e~~~~~l~~~l~~~~~~~~~v~~S~~~~lEI~p~gvSKG~ALk~L~e~l---GI~~ee 525 (580)
T PLN02887 449 MSSVDQLLAAADIQKVIFLDTAEGVSSVLRPYWSEATGDRANVVQAQPDMLEIVPPGTSKGNGVKMLLNHL---GVSPDE 525 (580)
T ss_pred cCCHHHhhcccCeeEEEEEcChHHHHHHHHHHHHHHhcCcEEEEEecCcEEEEecCCCCHHHHHHHHHHHc---CCCHHH
Confidence 000 0000 0 00 1122333434443333455677789999999999999999999999 999999
Q ss_pred EEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHHHHHHH
Q 002979 779 VMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 779 vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
|+||||+.||++||+.+|. +|+|||+ +..|+|++. +.++|.+.|++++
T Consensus 526 viAFGDs~NDIeMLe~AG~--------------gVAMgNA~eeVK~~Ad~VT~sNdEDGVA~aLek~~ 579 (580)
T PLN02887 526 IMAIGDGENDIEMLQLASL--------------GVALSNGAEKTKAVADVIGVSNDEDGVADAIYRYA 579 (580)
T ss_pred EEEEecchhhHHHHHHCCC--------------EEEeCCCCHHHHHhCCEEeCCCCcCHHHHHHHHhh
Confidence 9999999999999999996 7899987 478888874 5788999998864
No 28
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.91 E-value=1.4e-23 Score=222.40 Aligned_cols=216 Identities=24% Similarity=0.296 Sum_probs=154.2
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeC-CcceEE
Q 002979 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWN-KTSEWE 671 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~-~~~~~~ 671 (861)
|++|+||||++ .++.++++++++|++| +++|+.++++|||++..+.+++..++ ..++|+.||+++... +...+.
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~g~~~~i~TGR~~~~~~~~~~~~~~~~~~I~~nGa~i~~~~~~~l~~ 76 (254)
T PF08282_consen 1 IFSDLDGTLLN---SDGKISPETIEALKEL-QEKGIKLVIATGRSYSSIKRLLKELGIDDYFICSNGALIDDPKGKILYE 76 (254)
T ss_dssp EEEECCTTTCS---TTSSSCHHHHHHHHHH-HHTTCEEEEECSSTHHHHHHHHHHTTHCSEEEEGGGTEEEETTTEEEEE
T ss_pred cEEEECCceec---CCCeeCHHHHHHHHhh-cccceEEEEEccCcccccccccccccchhhhcccccceeeecccccchh
Confidence 79999999999 7888999999999999 78999999999999999999998765 358999999999444 444455
Q ss_pred ecCCccChHHHHHHHHHHHHHhhcC-------C-CceEeecc--c--------eeEee-ecc----CCccc-------hh
Q 002979 672 TNHLGADLEWKKIVEPVMRSYTEAT-------D-GSNIEIKE--S--------ALVWH-HQD----ADPDF-------GS 721 (861)
Q Consensus 672 ~~~~~~~~~w~~~v~~i~~~y~~~~-------~-gs~ie~k~--~--------~l~~~-~~~----~d~~~-------~~ 721 (861)
..++ .+.+..+++...+.. + +.++.... . ...+. ... ..... ..
T Consensus 77 ~~i~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ki~~~~~~ 150 (254)
T PF08282_consen 77 KPID------SDDVKKILKYLKEHNISFFFYTDDDIYIYENKDEEELFFEHKFFNFKESIVSEDDLEDEEIFKILFFPDP 150 (254)
T ss_dssp ESB-------HHHHHHHHHHHHHTTCEEEEEESSEEEESSTTCHHHHHHHHHHTSCEEEESHHHHHHCSSESEEEEESCH
T ss_pred hhee------ccchhheeehhhhcccccccccceeeecccccccchhhhhhcccccccccccccccccccceeeeccccc
Confidence 4443 233334443333211 1 11111110 0 00000 000 00000 01
Q ss_pred ccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCC
Q 002979 722 CQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSG 801 (861)
Q Consensus 722 ~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~ 801 (861)
.....+.+++.+.+.+....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.++.
T Consensus 151 ~~~~~l~~~l~~~~~~~~~~~~~~~~~lei~~~~vsK~~ai~~l~~~~---~i~~~~~~~~GD~~ND~~Ml~~~~~---- 223 (254)
T PF08282_consen 151 EDLEQLREELKKKFPNLIDVVRSSPYFLEITPKGVSKGSAIKYLLEYL---GISPEDIIAFGDSENDIEMLELAGY---- 223 (254)
T ss_dssp HHHHHHHHHHHHHHTTTEEEEEEETTEEEEEETTSSHHHHHHHHHHHH---TTSGGGEEEEESSGGGHHHHHHSSE----
T ss_pred hhhhhhhhhhccccCcceeEEEecccceEEeeCCCCHHHHHHHHhhhc---ccccceeEEeecccccHhHHhhcCe----
Confidence 234456666766666554677888999999999999999999999999 9999999999999999999999985
Q ss_pred CCCCCCCceEEEEeCCC----CcccceecCCH--hHHHHHH
Q 002979 802 PSLPVPPEIFACTVGRK----PSKAKYYLDDA--TDVLKLL 836 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~----~s~Aky~l~d~--~eV~~~L 836 (861)
+|+||++ +..|++++.+. ++|++.|
T Consensus 224 ----------~~am~na~~~~k~~a~~i~~~~~~~gv~~~i 254 (254)
T PF08282_consen 224 ----------SVAMGNATPELKKAADYITPSNNDDGVAKAI 254 (254)
T ss_dssp ----------EEEETTS-HHHHHHSSEEESSGTCTHHHHHH
T ss_pred ----------EEEEcCCCHHHHHhCCEEecCCCCChHHHhC
Confidence 7899987 47888887543 6677654
No 29
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=99.91 E-value=1.5e-23 Score=216.53 Aligned_cols=195 Identities=27% Similarity=0.335 Sum_probs=148.4
Q ss_pred EEEecCCccccCCCCCC-CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEE
Q 002979 593 AIFLDYDGTVVPETSII-KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWE 671 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~-~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~ 671 (861)
+|++|+||||++ .+ ..++++++++|++| ++.|+.++++|||+...+..+++.+ ..+++++||+.++.+++..|.
T Consensus 1 li~~D~DgTL~~---~~~~~~~~~~~~~l~~l-~~~g~~~~i~TGR~~~~~~~~~~~~-~~~~i~~nGa~i~~~~~~~~~ 75 (204)
T TIGR01484 1 LLFFDLDGTLLD---PNAHELSPETIEALERL-REAGVKVVLVTGRSLAEIKELLKQL-PLPLIAENGALIFYPGEILYI 75 (204)
T ss_pred CEEEeCcCCCcC---CCCCcCCHHHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHhC-CCCEEECCCcEEEECCEEEEE
Confidence 589999999998 55 78999999999999 5788999999999999999999775 478999999999988777776
Q ss_pred ecCCccChHHH---HHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcC-CCEEEE-EcC
Q 002979 672 TNHLGADLEWK---KIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN-EPAVVK-RGQ 746 (861)
Q Consensus 672 ~~~~~~~~~w~---~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~-~~~~v~-~g~ 746 (861)
.. ......|. +.+..++..+...+++..++.+.....+++..... ......++.+.++....+ ..+.+. ++.
T Consensus 76 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~s~~ 152 (204)
T TIGR01484 76 EP-SDVFEEILGIKEEIGAELKSLSEHYVGTFIEDKAIAVAIHYVGAEL--GQELDSKMRERLEKIGRNDLELEAIYVGK 152 (204)
T ss_pred cc-cccHHHHHHhhhhcCceeeeeccccccceeecccceeeEEEeccch--hhHHHHHHHHHHHhhccccCcEEEEEecC
Confidence 41 11111121 22223344445566777788888889998876411 111223444444433221 335566 799
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.++||+|++++|+.+++.+++++ +++++++++|||+.||++||+.++.+
T Consensus 153 ~~~ev~p~~~~K~~~~~~~~~~~---~~~~~~~~~~GD~~nD~~~~~~~~~~ 201 (204)
T TIGR01484 153 TDLEVLPAGVDKGSALQALLKEL---NGKRDEILAFGDSGNDEEMFEVAGLA 201 (204)
T ss_pred CEEEEecCCCChHHHHHHHHHHh---CCCHHHEEEEcCCHHHHHHHHHcCCc
Confidence 99999999999999999999999 99999999999999999999999874
No 30
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.90 E-value=7.1e-23 Score=220.97 Aligned_cols=224 Identities=19% Similarity=0.208 Sum_probs=149.5
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeC--C
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWN--K 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~--~ 666 (861)
++|+|++|+||||++ .++.++++++++|+++ +++|+.|+|||||++..+...+..+. ..++++.||+.+... +
T Consensus 2 ~~kli~~DlDGTLl~---~~~~i~~~~~~ai~~~-~~~G~~~~iaTGR~~~~~~~~~~~l~~~~~~I~~NGa~i~d~~~~ 77 (272)
T PRK10530 2 TYRVIALDLDGTLLT---PKKTILPESLEALARA-REAGYKVIIVTGRHHVAIHPFYQALALDTPAICCNGTYLYDYQAK 77 (272)
T ss_pred CccEEEEeCCCceEC---CCCccCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHhcCCCCCEEEcCCcEEEecCCC
Confidence 479999999999999 7888999999999999 79999999999999999999887764 235899999999863 3
Q ss_pred cceEEecCCccChHHHHHHHHHHHHHhhcC--------CCceEeeccc----eeEee----------eccCCc-------
Q 002979 667 TSEWETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKES----ALVWH----------HQDADP------- 717 (861)
Q Consensus 667 ~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~----~l~~~----------~~~~d~------- 717 (861)
...+...++. +.+..+++...+.. .+.+...... ...|. +...+.
T Consensus 78 ~~l~~~~l~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (272)
T PRK10530 78 KVLEADPLPV------QQALQVIEMLDEHQIHGLMYVDDAMLYEHPTGHVIRTLNWAQTLPPEQRPTFTQVDSLAQAARQ 151 (272)
T ss_pred EEEEecCCCH------HHHHHHHHHHHhCCcEEEEEcCCceEecCchHHHHHHhhhhhccchhcccceEEcccHHHHHhh
Confidence 3344444432 23333333322110 0111110000 00000 000000
Q ss_pred ---c--chhc-cHHHHHHHHHHHh-cCCCE-EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchH
Q 002979 718 ---D--FGSC-QAKELLDHLESVL-ANEPA-VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDE 789 (861)
Q Consensus 718 ---~--~~~~-~a~el~~~L~~~l-~~~~~-~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~ 789 (861)
. +... ...+..+.+.+.+ ..... .+.++..++|+.|++++||.|++++++++ |++++++++|||+.||+
T Consensus 152 ~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~ei~~~~~~K~~~l~~l~~~~---gi~~~e~i~~GD~~NDi 228 (272)
T PRK10530 152 VNAIWKFALTHEDLPQLQHFAKHVEHELGLECEWSWHDQVDIARKGNSKGKRLTQWVEAQ---GWSMKNVVAFGDNFNDI 228 (272)
T ss_pred cCCcEEEEEecCCHHHHHHHHHHHhhhcCceEEEecCceEEEecCCCChHHHHHHHHHHc---CCCHHHeEEeCCChhhH
Confidence 0 0000 0001112222222 22222 23445568999999999999999999999 99999999999999999
Q ss_pred HHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHHHHHHH
Q 002979 790 DMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKLLQGLA 840 (861)
Q Consensus 790 ~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~L~~L~ 840 (861)
+||+.+|. +|+||++ +..|+|+++ +.++|.++|+.+.
T Consensus 229 ~m~~~ag~--------------~vamgna~~~lk~~Ad~v~~~n~~dGv~~~l~~~~ 271 (272)
T PRK10530 229 SMLEAAGL--------------GVAMGNADDAVKARADLVIGDNTTPSIAEFIYSHV 271 (272)
T ss_pred HHHHhcCc--------------eEEecCchHHHHHhCCEEEecCCCCcHHHHHHHHh
Confidence 99999996 6888886 367888874 5678999998764
No 31
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=99.90 E-value=3.3e-22 Score=226.40 Aligned_cols=269 Identities=20% Similarity=0.280 Sum_probs=197.3
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhC
Q 002979 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLG 278 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg 278 (861)
+|+|+||+. +.+-..+++++|++++.+.+|..|. .+. ++ .++.|-+.+. +.+.++.. ..
T Consensus 100 ~~vi~v~~~--~~~~~~~~~~~~~~~~v~~~h~~~~-~~~----------~~---~~~~ii~~S~-~~~~~~~~---~~- 158 (380)
T PRK15484 100 DSVIVIHNS--MKLYRQIRERAPQAKLVMHMHNAFE-PEL----------LD---KNAKIIVPSQ-FLKKFYEE---RL- 158 (380)
T ss_pred CcEEEEeCc--HHhHHHHHhhCCCCCEEEEEecccC-hhH----------hc---cCCEEEEcCH-HHHHHHHh---hC-
Confidence 599999973 3455667888999999999997762 111 11 3566666654 44444331 00
Q ss_pred CccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHHHHHHH
Q 002979 279 LDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLA 355 (861)
Q Consensus 279 ~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~A 355 (861)
...++.++|+|||...|... .. ..+++++ .++++|+++||+.+.||+..+++|
T Consensus 159 ----------------~~~~i~vIpngvd~~~~~~~-----~~---~~~~~~~~~~~~~~~il~~Grl~~~Kg~~~Li~A 214 (380)
T PRK15484 159 ----------------PNADISIVPNGFCLETYQSN-----PQ---PNLRQQLNISPDETVLLYAGRISPDKGILLLMQA 214 (380)
T ss_pred ----------------CCCCEEEecCCCCHHHcCCc-----ch---HHHHHHhCCCCCCeEEEEeccCccccCHHHHHHH
Confidence 01235789999998877421 11 1233343 367899999999999999999999
Q ss_pred HHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccce
Q 002979 356 MEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCI 435 (861)
Q Consensus 356 f~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~v 435 (861)
+.++.+++|+++ |+++|.+......+..++++++.+++.+.+ ..+.+.+.++.+++..+|+.||+||
T Consensus 215 ~~~l~~~~p~~~----lvivG~g~~~~~~~~~~~~~~l~~~~~~l~---------~~v~~~G~~~~~~l~~~~~~aDv~v 281 (380)
T PRK15484 215 FEKLATAHSNLK----LVVVGDPTASSKGEKAAYQKKVLEAAKRIG---------DRCIMLGGQPPEKMHNYYPLADLVV 281 (380)
T ss_pred HHHHHHhCCCeE----EEEEeCCccccccchhHHHHHHHHHHHhcC---------CcEEEeCCCCHHHHHHHHHhCCEEE
Confidence 999999999876 888886543222233456667776665542 1235778899999999999999999
Q ss_pred eccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---Cce-EeCCCCHHHHHHHHHHHh
Q 002979 436 VNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI-RVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 436 vtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai-~vnP~d~~~~A~ai~~aL 510 (861)
+||. .||||++++||||| |.|+|+|..+|+.+.+. .|+ +++|.|++++|++|.+++
T Consensus 282 ~pS~~~E~f~~~~lEAma~-------------------G~PVI~s~~gg~~Eiv~~~~~G~~l~~~~d~~~la~~I~~ll 342 (380)
T PRK15484 282 VPSQVEEAFCMVAVEAMAA-------------------GKPVLASTKGGITEFVLEGITGYHLAEPMTSDSIISDINRTL 342 (380)
T ss_pred eCCCCccccccHHHHHHHc-------------------CCCEEEeCCCCcHhhcccCCceEEEeCCCCHHHHHHHHHHHH
Confidence 9997 59999999999999 45689999988887773 355 678999999999999999
Q ss_pred cCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHH
Q 002979 511 NMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLER 546 (861)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~ 546 (861)
+.++ +..+.++.++++ ..+++...++++++.++.
T Consensus 343 ~d~~--~~~~~~~ar~~~~~~fsw~~~a~~~~~~l~~ 377 (380)
T PRK15484 343 ADPE--LTQIAEQAKDFVFSKYSWEGVTQRFEEQIHN 377 (380)
T ss_pred cCHH--HHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 8664 344556666554 668999999988887765
No 32
>PLN02939 transferase, transferring glycosyl groups
Probab=99.90 E-value=6e-22 Score=235.86 Aligned_cols=319 Identities=15% Similarity=0.145 Sum_probs=215.2
Q ss_pred hHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEEecC-----CCChHHHhc--C
Q 002979 176 LWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSP-----FPSSEIYRT--L 242 (861)
Q Consensus 176 ~w~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~P-----fP~~e~f~~--l 242 (861)
+...|.-+.+..++-+... .+| |+|++||+|-.++|.++.+. +.++++.|.+|-= ||... +.. +
T Consensus 589 n~~RF~~FsrAaLe~~~~~~~~P--DIIH~HDW~TaLV~pll~~~y~~~~~~~~ktVfTIHNl~yQG~f~~~~-l~~lGL 665 (977)
T PLN02939 589 DFKRFSYFSRAALELLYQSGKKP--DIIHCHDWQTAFVAPLYWDLYAPKGFNSARICFTCHNFEYQGTAPASD-LASCGL 665 (977)
T ss_pred HHHHHHHHHHHHHHHHHhcCCCC--CEEEECCccHHHHHHHHHHHHhhccCCCCcEEEEeCCCcCCCcCCHHH-HHHcCC
Confidence 3444555556665555443 356 89999999999985544432 4568999999953 33222 221 2
Q ss_pred Cc---------------hHH-HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccC
Q 002979 243 PV---------------RDE-ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV 306 (861)
Q Consensus 243 p~---------------r~~-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI 306 (861)
|+ +-. +.-|+..||.|-.-++.|++.-+. .---|++. .+..+..++.++|+||
T Consensus 666 ~~~~l~~~d~le~~~~~~iN~LK~GIv~AD~VtTVSptYA~EI~t--e~G~GL~~---------~L~~~~~Kl~gIlNGI 734 (977)
T PLN02939 666 DVHQLDRPDRMQDNAHGRINVVKGAIVYSNIVTTVSPTYAQEVRS--EGGRGLQD---------TLKFHSKKFVGILNGI 734 (977)
T ss_pred CHHHccChhhhhhccCCchHHHHHHHHhCCeeEeeeHHHHHHHHH--HhccchHH---------HhccccCCceEEecce
Confidence 21 111 234677799998889999887654 11011110 1123445778899999
Q ss_pred CchHHHHhhCC-------c----hhHHHHHHHHHHcC------CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCc
Q 002979 307 HMGRLESVLNL-------P----ATATKIKEIEKQFD------GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGK 369 (861)
Q Consensus 307 d~~~~~~~~~~-------~----~~~~~~~~l~~~~~------~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~ 369 (861)
|.+.|.+.... . ........+++++. +.++|++|+|+.+.||+..++.|+.++++ ++
T Consensus 735 D~e~wnPatD~~L~~~Ys~~dl~GK~~nK~aLRkelGL~~~d~d~pLIg~VGRL~~QKGiDlLleA~~~Ll~--~d---- 808 (977)
T PLN02939 735 DTDTWNPSTDRFLKVQYNANDLQGKAANKAALRKQLGLSSADASQPLVGCITRLVPQKGVHLIRHAIYKTAE--LG---- 808 (977)
T ss_pred ehhhcCCccccccccccChhhhhhhhhhhHHHHHHhCCCcccccceEEEEeecCCcccChHHHHHHHHHHhh--cC----
Confidence 99988643210 0 00112345677762 35899999999999999999999998875 33
Q ss_pred EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCccee
Q 002979 370 VVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYK 449 (861)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~E 449 (861)
+.||++|. |++ ..+++++.+++.+.+ . .+.+.|.+.++......+|+.||+||+||.+|||||+++|
T Consensus 809 vqLVIvGd-----Gp~-~~~e~eL~~La~~l~----l---~drV~FlG~~de~lah~IYAaADIFLmPSr~EPfGLvqLE 875 (977)
T PLN02939 809 GQFVLLGS-----SPV-PHIQREFEGIADQFQ----S---NNNIRLILKYDEALSHSIYAASDMFIIPSMFEPCGLTQMI 875 (977)
T ss_pred CEEEEEeC-----CCc-HHHHHHHHHHHHHcC----C---CCeEEEEeccCHHHHHHHHHhCCEEEECCCccCCcHHHHH
Confidence 34888883 322 234556666665542 1 2345566677777788999999999999999999999999
Q ss_pred eeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC------------CceEeCCCCHHHHHHHHHHHhcC---CH
Q 002979 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS------------GAIRVNPWDIDAVADAMTLAINM---RD 514 (861)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------------~ai~vnP~d~~~~A~ai~~aL~m---~~ 514 (861)
||+| |.|+|++..+|+.+.+. +|++++|.|+++++++|.+++.. .+
T Consensus 876 AMAy-------------------GtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf~~~D~eaLa~AL~rAL~~~~~dp 936 (977)
T PLN02939 876 AMRY-------------------GSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTFLTPDEQGLNSALERAFNYYKRKP 936 (977)
T ss_pred HHHC-------------------CCCEEEecCCCCcceeecCCccccccCCCceEEecCCCHHHHHHHHHHHHHHhccCH
Confidence 9999 56789999999887662 48999999999999999999862 34
Q ss_pred HHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHH
Q 002979 515 SEKQLRHEKHYRYVSTHDVAYWARSFAQDLERAC 548 (861)
Q Consensus 515 ~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 548 (861)
+.++.+.++. ....+++...++.+.+-..++.
T Consensus 937 e~~~~L~~~a--m~~dFSWe~~A~qYeeLY~~ll 968 (977)
T PLN02939 937 EVWKQLVQKD--MNIDFSWDSSASQYEELYQRAV 968 (977)
T ss_pred HHHHHHHHHH--HHhcCCHHHHHHHHHHHHHHHH
Confidence 4443333322 2356889999988877666554
No 33
>PLN02316 synthase/transferase
Probab=99.90 E-value=7.5e-22 Score=239.30 Aligned_cols=310 Identities=13% Similarity=0.097 Sum_probs=216.6
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhh-----cCCCeEEEEEecCCCChHHHhcCCchHHH
Q 002979 175 VLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKR-----FNRIKLGFFLHSPFPSSEIYRTLPVRDEI 248 (861)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~-----~~~~~i~~flH~PfP~~e~f~~lp~r~~i 248 (861)
+...-|..+++..++.+... .+| |+|++||.|-.++|.++++. +.+.++.+.+|-.- | .+..+
T Consensus 687 Dd~~RF~~F~~Aale~l~~~~~~P--DIIHaHDW~talva~llk~~~~~~~~~~~p~V~TiHnl~-----~----~~n~l 755 (1036)
T PLN02316 687 NDGERFGFFCHAALEFLLQSGFHP--DIIHCHDWSSAPVAWLFKDHYAHYGLSKARVVFTIHNLE-----F----GANHI 755 (1036)
T ss_pred hHHHHHHHHHHHHHHHHHhcCCCC--CEEEECCChHHHHHHHHHHhhhhhccCCCCEEEEeCCcc-----c----chhHH
Confidence 34455666666666655433 355 99999999999999999875 35689999999431 1 12235
Q ss_pred HHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCC--c-----h--
Q 002979 249 LRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNL--P-----A-- 319 (861)
Q Consensus 249 l~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~--~-----~-- 319 (861)
-.++..||.|---+..|++..+.. +. + ..+..++.++|+|||++.|.+.... | +
T Consensus 756 k~~l~~AD~ViTVS~tya~EI~~~-----~~----------l--~~~~~Kl~vI~NGID~~~w~P~tD~~lp~~y~~~~~ 818 (1036)
T PLN02316 756 GKAMAYADKATTVSPTYSREVSGN-----SA----------I--APHLYKFHGILNGIDPDIWDPYNDNFIPVPYTSENV 818 (1036)
T ss_pred HHHHHHCCEEEeCCHHHHHHHHhc-----cC----------c--ccccCCEEEEECCccccccCCcccccccccCCchhh
Confidence 567788999998888888766541 00 0 1123467789999999887532110 0 0
Q ss_pred ---hHHHHHHHHHHcC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHH
Q 002979 320 ---TATKIKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKE 392 (861)
Q Consensus 320 ---~~~~~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~ 392 (861)
.......+++++. +.++|++|+||.+.||+..++.|+.++++. + +.||++|. |++ ..++.+
T Consensus 819 ~~gK~~~k~~Lr~~lGL~~~d~plVg~VGRL~~qKGvdlLi~Al~~ll~~--~----~qlVIvG~-----Gpd-~~~e~~ 886 (1036)
T PLN02316 819 VEGKRAAKEALQQRLGLKQADLPLVGIITRLTHQKGIHLIKHAIWRTLER--N----GQVVLLGS-----APD-PRIQND 886 (1036)
T ss_pred hhhhhhhHHHHHHHhCCCcccCeEEEEEeccccccCHHHHHHHHHHHhhc--C----cEEEEEeC-----CCC-HHHHHH
Confidence 0122345667662 578999999999999999999999999863 3 34777773 333 345667
Q ss_pred HHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCC
Q 002979 393 TYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPH 472 (861)
Q Consensus 393 v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~ 472 (861)
+.+++.++...+. ..+.|.+..+......+|++||+||+||..|||||+.+|||+|
T Consensus 887 l~~La~~Lg~~~~-----~rV~f~g~~de~lah~iyaaADiflmPS~~EP~GLvqLEAMa~------------------- 942 (1036)
T PLN02316 887 FVNLANQLHSSHH-----DRARLCLTYDEPLSHLIYAGADFILVPSIFEPCGLTQLTAMRY------------------- 942 (1036)
T ss_pred HHHHHHHhCccCC-----CeEEEEecCCHHHHHHHHHhCcEEEeCCcccCccHHHHHHHHc-------------------
Confidence 7777776644332 2334444444444458999999999999999999999999999
Q ss_pred CceEEeccCCCCcccC-C---------------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhH
Q 002979 473 TSMLVVSEFIGCSPSL-S---------------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAY 535 (861)
Q Consensus 473 ~g~lV~Se~~G~~~~l-~---------------~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~ 535 (861)
|.|+|++..+|..+.+ + .|++|+|.|++++++||.++|......+....+..++.+ ..+++..
T Consensus 943 GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~tGflf~~~d~~aLa~AL~raL~~~~~~~~~~~~~~r~~m~~dFSW~~ 1022 (1036)
T PLN02316 943 GSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPNGFSFDGADAAGVDYALNRAISAWYDGRDWFNSLCKRVMEQDWSWNR 1022 (1036)
T ss_pred CCCeEEEcCCCcHhhccccccccccccccccCCceEEeCCCCHHHHHHHHHHHHhhhhhhHHHHHHHHHHHHHhhCCHHH
Confidence 4568999999999887 2 389999999999999999999864332333233334443 4588888
Q ss_pred HHHHHHHHHHHHH
Q 002979 536 WARSFAQDLERAC 548 (861)
Q Consensus 536 W~~~fl~~l~~~~ 548 (861)
-++++++-..++.
T Consensus 1023 ~A~~Y~~LY~~a~ 1035 (1036)
T PLN02316 1023 PALDYMELYHSAR 1035 (1036)
T ss_pred HHHHHHHHHHHHh
Confidence 8888876665543
No 34
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=99.89 E-value=5.1e-22 Score=229.16 Aligned_cols=316 Identities=16% Similarity=0.118 Sum_probs=196.3
Q ss_pred hHHHHHHHHHHHHHHHHHHc-CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChH--HH---------h---
Q 002979 176 LWQAYVSANKIFADKVMEVI-NPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE--IY---------R--- 240 (861)
Q Consensus 176 ~w~~Y~~vN~~fa~~v~~~~-~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e--~f---------~--- 240 (861)
.|.....+...+.+.+.+.. +| |+|++|+++--++..++++.. +.|+.+..|....... +. .
T Consensus 93 ~~~~~~~~~~~l~~~~~~~~~~~--DvIH~h~~~~~~~~~~~~~~~-~~p~V~t~H~~~~~~~~~~~~~~~~~~~~~~~~ 169 (439)
T TIGR02472 93 LWPYLDELADNLLQHLRQQGHLP--DLIHAHYADAGYVGARLSRLL-GVPLIFTGHSLGREKRRRLLAAGLKPQQIEKQY 169 (439)
T ss_pred hhhhHHHHHHHHHHHHHHcCCCC--CEEEEcchhHHHHHHHHHHHh-CCCEEEecccccchhhhhcccCCCChhhhhhhc
Confidence 34444445555555444332 45 999999987666666665544 5789999997532211 00 0
Q ss_pred cCCchHH-HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCch
Q 002979 241 TLPVRDE-ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPA 319 (861)
Q Consensus 241 ~lp~r~~-il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~ 319 (861)
.++.+-. -...+..+|.|-..+...++.-+. .. .+-...++.++|+|||++.|.+....+.
T Consensus 170 ~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~---~~---------------~~~~~~ki~vIpnGvd~~~f~~~~~~~~ 231 (439)
T TIGR02472 170 NISRRIEAEEETLAHASLVITSTHQEIEEQYA---LY---------------DSYQPERMQVIPPGVDLSRFYPPQSSEE 231 (439)
T ss_pred chHHHHHHHHHHHHhCCEEEECCHHHHHHHHH---hc---------------cCCCccceEEECCCcChhhcCCCCcccc
Confidence 0011100 112233456554444322211110 00 0012346788999999998864322111
Q ss_pred hHHHHHHHHHHc--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHH----HHHHHH
Q 002979 320 TATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQ----EAKKET 393 (861)
Q Consensus 320 ~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~----~~~~~v 393 (861)
.......+++.. .++++|++|+|+++.||+..+|+||.++.+..+.. ++++ .+|... ..+.++ ++.+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~A~~~l~~~~~~~--~l~l-i~G~g~--~~~~l~~~~~~~~~~~ 306 (439)
T TIGR02472 232 TSEIDNLLAPFLKDPEKPPILAISRPDRRKNIPSLVEAYGRSPKLQEMA--NLVL-VLGCRD--DIRKMESQQREVLQKV 306 (439)
T ss_pred chhHHHHHHhhccccCCcEEEEEcCCcccCCHHHHHHHHHhChhhhhhc--cEEE-EeCCcc--ccccccHHHHHHHHHH
Confidence 111111222221 46789999999999999999999998643221111 2322 234211 111111 122233
Q ss_pred HHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc----ccceecccccCCCCcceeeeeeecCCCcccccccCCCC
Q 002979 394 YLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA----ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (861)
Q Consensus 394 ~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A----Dv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (861)
..++++ .+....+.|.+.++.+++.++|+.| |+||+||.+||||++++|||||
T Consensus 307 ~~~~~~-------~~l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv~v~pS~~E~fg~~~lEAma~---------------- 363 (439)
T TIGR02472 307 LLLIDR-------YDLYGKVAYPKHHRPDDVPELYRLAARSRGIFVNPALTEPFGLTLLEAAAC---------------- 363 (439)
T ss_pred HHHHHH-------cCCCceEEecCCCCHHHHHHHHHHHhhcCCEEecccccCCcccHHHHHHHh----------------
Confidence 333433 2344567788899999999999988 9999999999999999999999
Q ss_pred CCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHH
Q 002979 470 SPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDL 544 (861)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l 544 (861)
+.|+|+|..+|+.+.+. +|++|+|.|++++|++|.++++. +++++.+.++.++++. .+++..-++++++-|
T Consensus 364 ---G~PvV~s~~gg~~eiv~~~~~G~lv~~~d~~~la~~i~~ll~~-~~~~~~~~~~a~~~~~~~fsw~~~~~~~~~l~ 438 (439)
T TIGR02472 364 ---GLPIVATDDGGPRDIIANCRNGLLVDVLDLEAIASALEDALSD-SSQWQLWSRNGIEGVRRHYSWDAHVEKYLRIL 438 (439)
T ss_pred ---CCCEEEeCCCCcHHHhcCCCcEEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHh
Confidence 55699999999888873 48999999999999999999984 4556666777777664 578888888777644
No 35
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.89 E-value=2.1e-22 Score=215.53 Aligned_cols=216 Identities=21% Similarity=0.262 Sum_probs=146.2
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC-CceEecCcEEEEeCC-cceE
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LGIAAEHGYFIRWNK-TSEW 670 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-lgliaenG~~i~~~~-~~~~ 670 (861)
+|++|+||||++ .++.++++++++|+++ +++|+.|+|+|||++..+...+..+.. .++|+.||+.+...+ ..++
T Consensus 1 li~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~G~~~~iaTGR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~i~ 76 (256)
T TIGR00099 1 LIFIDLDGTLLN---DDHTISPSTKEALAKL-REKGIKVVLATGRPYKEVKNILKELGLDTPFITANGAAVIDDQGEILY 76 (256)
T ss_pred CEEEeCCCCCCC---CCCccCHHHHHHHHHH-HHCCCeEEEEeCCCHHHHHHHHHHcCCCCCEEEcCCcEEECCCCCEEe
Confidence 589999999999 7788999999999999 789999999999999999998877653 379999999998764 4455
Q ss_pred EecCCccChHHHHHHHHHHHHHhhcC--------CCceEeeccce-eEee----ec------cC----Cccch---hccH
Q 002979 671 ETNHLGADLEWKKIVEPVMRSYTEAT--------DGSNIEIKESA-LVWH----HQ------DA----DPDFG---SCQA 724 (861)
Q Consensus 671 ~~~~~~~~~~w~~~v~~i~~~y~~~~--------~gs~ie~k~~~-l~~~----~~------~~----d~~~~---~~~a 724 (861)
...++. +.+..+++...+.. .+.++...... .... +. +. +..+. ....
T Consensus 77 ~~~i~~------~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 150 (256)
T TIGR00099 77 KKPLDL------DLVEEILNFLKKHGLDVILYGDDSIYASKNDPEYFTIFKKFLGEPKLEVVDIQYLPDDILKILLLFLD 150 (256)
T ss_pred ecCCCH------HHHHHHHHHHHHcCcEEEEEeCCeEEecCCCcchhHHHHHhccCCcceeccchhhhcccceEEEEECC
Confidence 555442 33334443332211 11222111000 0000 00 00 00000 0011
Q ss_pred HHHHHHHHHHhc-----CCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccC
Q 002979 725 KELLDHLESVLA-----NEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTV 799 (861)
Q Consensus 725 ~el~~~L~~~l~-----~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~ 799 (861)
.+..+.+.+.+. .....+.++..++||.|+++|||.|++++++++ |++++++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~leI~~~~~~K~~~i~~~~~~~---~~~~~~~~~~GD~~nD~~m~~~~~~-- 225 (256)
T TIGR00099 151 PEDLDLLIEALNKLELEENVSVVSSGPYSIEITAKGVSKGSALQSLAEAL---GISLEDVIAFGDGMNDIEMLEAAGY-- 225 (256)
T ss_pred HHHHHHHHHHhhhhhhcCCEEEEEecCceEEecCCCCChHHHHHHHHHHc---CCCHHHEEEeCCcHHhHHHHHhCCc--
Confidence 122233333332 222345677889999999999999999999999 9999999999999999999999986
Q ss_pred CCCCCCCCCceEEEEeCCC----CcccceecC--CHhHHHHH
Q 002979 800 SGPSLPVPPEIFACTVGRK----PSKAKYYLD--DATDVLKL 835 (861)
Q Consensus 800 ~~~~~~~~~~~~av~vG~~----~s~Aky~l~--d~~eV~~~ 835 (861)
+|+||++ +..|+|++. +.++|.++
T Consensus 226 ------------~~a~~na~~~~k~~a~~~~~~n~~dGV~~~ 255 (256)
T TIGR00099 226 ------------GVAMGNADEELKALADYVTDSNNEDGVALA 255 (256)
T ss_pred ------------eeEecCchHHHHHhCCEEecCCCCcchhhh
Confidence 6788876 366888875 35667654
No 36
>PRK00654 glgA glycogen synthase; Provisional
Probab=99.89 E-value=8.2e-22 Score=229.04 Aligned_cols=293 Identities=18% Similarity=0.220 Sum_probs=193.0
Q ss_pred CEEEEeCcccccHHHHHHhhc----CCCeEEEEEecCCC----ChHHHhcC--Cc-------------hHHHHHHhhcCC
Q 002979 200 DCVWVHDYHLMVLPTFLRKRF----NRIKLGFFLHSPFP----SSEIYRTL--PV-------------RDEILRGLLNCD 256 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~----~~~~i~~flH~PfP----~~e~f~~l--p~-------------r~~il~~ll~~d 256 (861)
|+|++||+|--++|.++++++ .+.++.++.|..-. ..+.+..+ |+ ..-+..++..||
T Consensus 120 DiiH~h~w~~~~~~~~l~~~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad 199 (466)
T PRK00654 120 DIVHAHDWHTGLIPALLKEKYWRGYPDIKTVFTIHNLAYQGLFPAEILGELGLPAEAFHLEGLEFYGQISFLKAGLYYAD 199 (466)
T ss_pred ceEEECCcHHHHHHHHHHHhhhccCCCCCEEEEcCCCcCCCcCCHHHHHHcCCChHHcCchhhhcCCcccHHHHHHHhcC
Confidence 999999999999999998663 46899999997521 11111111 11 111223455666
Q ss_pred EEeecChHhHHHHHHHHHHHhCCccccCCCeeeE--EecCeEEEEEEecccCCchHHHHhhCC-------c----hhHHH
Q 002979 257 LIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGL--DYFGRTVYIKILPVGVHMGRLESVLNL-------P----ATATK 323 (861)
Q Consensus 257 ligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~--~~~gr~~~i~v~p~GId~~~~~~~~~~-------~----~~~~~ 323 (861)
.|--.+..|++..... ..| . ++ .+..+..++.++|+|||.+.|.+.... + .....
T Consensus 200 ~vitvS~~~~~ei~~~---~~~------~---gl~~~~~~~~~ki~vI~NGid~~~~~p~~~~~~~~~~~~~~~~~k~~~ 267 (466)
T PRK00654 200 RVTTVSPTYAREITTP---EFG------Y---GLEGLLRARSGKLSGILNGIDYDIWNPETDPLLAANYSADDLEGKAEN 267 (466)
T ss_pred cCeeeCHHHHHHhccc---cCC------c---ChHHHHHhcccCceEecCCCCccccCCccCcccccccChhhhhchHHH
Confidence 6665565555433210 000 0 00 001123468889999999988642110 0 01122
Q ss_pred HHHHHHHcC----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHH
Q 002979 324 IKEIEKQFD----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKR 399 (861)
Q Consensus 324 ~~~l~~~~~----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~ 399 (861)
.+.+++++. +.++|++|||+++.||+..+++|+++++++ + +.|+.+|.+ + ..+++++++++++
T Consensus 268 k~~l~~~~gl~~~~~~~i~~vGRl~~~KG~~~li~a~~~l~~~--~----~~lvivG~g-----~--~~~~~~l~~l~~~ 334 (466)
T PRK00654 268 KRALQERFGLPDDDAPLFAMVSRLTEQKGLDLVLEALPELLEQ--G----GQLVLLGTG-----D--PELEEAFRALAAR 334 (466)
T ss_pred HHHHHHHhCCCCCCCcEEEEeeccccccChHHHHHHHHHHHhc--C----CEEEEEecC-----c--HHHHHHHHHHHHH
Confidence 345666662 568999999999999999999999998764 3 448877742 1 1244555556554
Q ss_pred HhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec
Q 002979 400 INEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS 479 (861)
Q Consensus 400 IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S 479 (861)
.+ . .++++.+. +.+....+|+.||+||+||.+||||++.+|||+| +.|+|+|
T Consensus 335 ~~----~----~v~~~~g~-~~~~~~~~~~~aDv~v~PS~~E~~gl~~lEAma~-------------------G~p~V~~ 386 (466)
T PRK00654 335 YP----G----KVGVQIGY-DEALAHRIYAGADMFLMPSRFEPCGLTQLYALRY-------------------GTLPIVR 386 (466)
T ss_pred CC----C----cEEEEEeC-CHHHHHHHHhhCCEEEeCCCCCCchHHHHHHHHC-------------------CCCEEEe
Confidence 32 1 24445544 5566779999999999999999999999999999 5668999
Q ss_pred cCCCCcccC-C--------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002979 480 EFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINM--RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 480 e~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
..+|+.+.+ + .|++|+|.|+++++++|.++++. .++.++.+.++.. ...+++..-++++++-..++
T Consensus 387 ~~gG~~e~v~~~~~~~~~~~G~lv~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~--~~~fsw~~~a~~~~~lY~~~ 463 (466)
T PRK00654 387 RTGGLADTVIDYNPEDGEATGFVFDDFNAEDLLRALRRALELYRQPPLWRALQRQAM--AQDFSWDKSAEEYLELYRRL 463 (466)
T ss_pred CCCCccceeecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHHh--ccCCChHHHHHHHHHHHHHH
Confidence 999999887 2 38999999999999999999863 2222322222222 24678888888777655554
No 37
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.89 E-value=2e-22 Score=211.20 Aligned_cols=210 Identities=19% Similarity=0.215 Sum_probs=143.3
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc--ceE
Q 002979 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT--SEW 670 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~--~~~ 670 (861)
|++|+||||++ +++.+++++.++|+++ +++|+.|+++|||++..+..++..+. ..+++++||+.+...+. ..|
T Consensus 1 i~~DlDGTLl~---~~~~i~~~~~~al~~l-~~~Gi~~~~aTGR~~~~~~~~~~~l~~~~~~i~~nGa~i~~~~~~~~~~ 76 (225)
T TIGR01482 1 IASDIDGTLTD---PNRAINESALEAIRKA-ESVGIPVVLVTGNSVQFARALAKLIGTPDPVIAENGGEISYNEGMDDIF 76 (225)
T ss_pred CeEeccCccCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCchHHHHHHHHHhCCCCeEEEecCcEEEeCCCCceEE
Confidence 68999999999 7788999999999999 89999999999999999998887765 45699999999988653 345
Q ss_pred EecCCccChHHHHHH-HHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEE
Q 002979 671 ETNHLGADLEWKKIV-EPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIV 749 (861)
Q Consensus 671 ~~~~~~~~~~w~~~v-~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~v 749 (861)
..... ..|.... ......+.. ..-.+ .. ...........++ +....+.+.+.. ...+.++..++
T Consensus 77 ~~~~~---~~~~~~~~~~~~~~~~~-~~~~~-~~-~~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~~~~~~~~~ 141 (225)
T TIGR01482 77 LAYLE---EEWFLDIVIAKTFPFSR-LKVQY-PR-RASLVKMRYGIDV--------DTVREIIKELGL-NLVAVDSGFDI 141 (225)
T ss_pred ecccC---HHHHHHHHHhcccchhh-hcccc-cc-ccceEEEeecCCH--------HHHHHHHHhcCc-eEEEecCCcEE
Confidence 44332 2232211 110000000 00000 00 0000000000111 112222222221 12333566799
Q ss_pred EEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Cccccee
Q 002979 750 EVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYY 825 (861)
Q Consensus 750 EI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~ 825 (861)
||.|++++||.+++++++++ |++++++++|||+.||++||+.+|. +++|||+ +..|+|+
T Consensus 142 ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~~GD~~NDi~m~~~ag~--------------~vam~Na~~~~k~~A~~v 204 (225)
T TIGR01482 142 HILPQGVNKGVAVKKLKEKL---GIKPGETLVCGDSENDIDLFEVPGF--------------GVAVANAQPELKEWADYV 204 (225)
T ss_pred EEeeCCCCHHHHHHHHHHHh---CCCHHHEEEECCCHhhHHHHHhcCc--------------eEEcCChhHHHHHhcCee
Confidence 99999999999999999999 9999999999999999999999986 7888886 4778888
Q ss_pred cC--CHhH----HHHHHHHH
Q 002979 826 LD--DATD----VLKLLQGL 839 (861)
Q Consensus 826 l~--d~~e----V~~~L~~L 839 (861)
+. +.++ |.+.|+++
T Consensus 205 t~~~~~~G~~~~v~~~l~~~ 224 (225)
T TIGR01482 205 TESPYGEGGAEAIGEILQAI 224 (225)
T ss_pred cCCCCCCcHHHHHHHHHHhh
Confidence 74 4566 88888765
No 38
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.89 E-value=4.2e-22 Score=207.53 Aligned_cols=207 Identities=19% Similarity=0.256 Sum_probs=141.1
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCC-ceEecCcEEEEeCCcce
Q 002979 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEML-GIAAEHGYFIRWNKTSE 669 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~l-gliaenG~~i~~~~~~~ 669 (861)
+|+|++|+||||++ .++.+++++.++|++| +++|+.|+++|||++..+..++..++.. +++++||+.+...+...
T Consensus 1 ik~v~~DlDGTLl~---~~~~i~~~~~~~i~~l-~~~g~~~~~~TGR~~~~~~~~~~~l~~~~~~i~~NGa~i~~~~~~~ 76 (215)
T TIGR01487 1 IKLVAIDIDGTLTE---PNRMISERAIEAIRKA-EKKGIPVSLVTGNTVPFARALAVLIGTSGPVVAENGGVIFYNKEDI 76 (215)
T ss_pred CcEEEEecCCCcCC---CCcccCHHHHHHHHHH-HHCCCEEEEEcCCcchhHHHHHHHhCCCCcEEEccCcEEEeCCCcE
Confidence 47999999999999 7888999999999999 7999999999999999999988777543 68999999999865433
Q ss_pred EEecCCccChHHH-HHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeE
Q 002979 670 WETNHLGADLEWK-KIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHI 748 (861)
Q Consensus 670 ~~~~~~~~~~~w~-~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~ 748 (861)
.... . ...|. ...... .+....-...+ ......+... .+ ....+.+.+ ......+..+...
T Consensus 77 ~~~~--~-~~~~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~~--~~-----~~~~~~~~l----~~~~~~~~~~~~~ 138 (215)
T TIGR01487 77 FLAN--M-EEEWFLDEEKKK--RFPRDRLSNEY--PRASLVIMRE--GK-----DVDEVREII----KERGLNLVDSGFA 138 (215)
T ss_pred EEec--c-cchhhHHHhhhh--hhhhhhccccc--ceeEEEEecC--Cc-----cHHHHHHHH----HhCCeEEEecCce
Confidence 1111 1 11111 000000 01000000000 0001111110 00 112222233 2234444555678
Q ss_pred EEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccce
Q 002979 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKY 824 (861)
Q Consensus 749 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky 824 (861)
+||.|.+++||.+++++++++ |++++++++|||+.||++||+.+|. +|+|||+ +..|+|
T Consensus 139 ~ei~~~~~~K~~~i~~l~~~~---~i~~~~~i~iGDs~ND~~ml~~ag~--------------~vam~na~~~~k~~A~~ 201 (215)
T TIGR01487 139 IHIMKKGVDKGVGVEKLKELL---GIKPEEVAAIGDSENDIDLFRVVGF--------------KVAVANADDQLKEIADY 201 (215)
T ss_pred EEEecCCCChHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHhCCC--------------eEEcCCccHHHHHhCCE
Confidence 999999999999999999999 9999999999999999999999986 7888886 467888
Q ss_pred ecC--CHhHHHHHH
Q 002979 825 YLD--DATDVLKLL 836 (861)
Q Consensus 825 ~l~--d~~eV~~~L 836 (861)
++. +.++|.++|
T Consensus 202 v~~~~~~~Gv~~~l 215 (215)
T TIGR01487 202 VTSNPYGEGVVEVL 215 (215)
T ss_pred EcCCCCCchhhhhC
Confidence 875 356666543
No 39
>PRK14098 glycogen synthase; Provisional
Probab=99.89 E-value=6.8e-22 Score=229.94 Aligned_cols=319 Identities=15% Similarity=0.150 Sum_probs=213.1
Q ss_pred HhHHHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhhc------CCCeEEEEEecCC-----CChHHHhcC
Q 002979 175 VLWQAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF------NRIKLGFFLHSPF-----PSSEIYRTL 242 (861)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~~------~~~~i~~flH~Pf-----P~~e~f~~l 242 (861)
+....|.-.++..++.+.+. ++| |+|++||+|-.++|.+++++. .++|+.+..|... |....-..+
T Consensus 119 d~~~rf~~f~~a~l~~~~~~~~~p--DiiH~hdw~t~l~~~~l~~~~~~~~~~~~~~~V~TiHn~~~qg~~~~~~~~~~~ 196 (489)
T PRK14098 119 GSAEKVIFFNVGVLETLQRLGWKP--DIIHCHDWYAGLVPLLLKTVYADHEFFKDIKTVLTIHNVYRQGVLPFKVFQKLL 196 (489)
T ss_pred cHHHHHHHHHHHHHHHHHhcCCCC--CEEEecCcHHHHHHHHHHHHhhhccccCCCCEEEEcCCCcccCCCCHHHHHHhC
Confidence 34567777777777766542 356 999999999999999998764 4789999999742 221111113
Q ss_pred Cch------------HHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchH
Q 002979 243 PVR------------DEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGR 310 (861)
Q Consensus 243 p~r------------~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~ 310 (861)
|+. .-+-.++..||.|---++.|++.-.+....-.|++. ....+..++.++|+|||.+.
T Consensus 197 ~~~~~~~~~~~~~~~n~lk~~i~~ad~VitVS~~~a~ei~~~~~~~~gl~~---------~l~~~~~kl~~I~NGID~~~ 267 (489)
T PRK14098 197 PEEVCSGLHREGDEVNMLYTGVEHADLLTTTSPRYAEEIAGDGEEAFGLDK---------VLEERKMRLHGILNGIDTRQ 267 (489)
T ss_pred CHHhhhhhhhcCCcccHHHHHHHhcCcceeeCHHHHHHhCcCCCCCcChHH---------HHHhcCCCeeEEeCCccccc
Confidence 321 123345677787777777777654320000001100 00113456788999999998
Q ss_pred HHHhhCCc-----------hhHHHHHHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002979 311 LESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 311 ~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
|.+..... ........+++++ +++++|++|+|+.+.||+..+++|+.++++. + +.|++
T Consensus 268 ~~p~~d~~~~~~~~~~~~~~k~~~k~~l~~~lgl~~~~~~~~i~~vgRl~~~KG~d~li~a~~~l~~~--~----~~lvi 341 (489)
T PRK14098 268 WNPSTDKLIKKRYSIERLDGKLENKKALLEEVGLPFDEETPLVGVIINFDDFQGAELLAESLEKLVEL--D----IQLVI 341 (489)
T ss_pred cCCcccccccccCCcchhhhHHHHHHHHHHHhCCCCccCCCEEEEeccccccCcHHHHHHHHHHHHhc--C----cEEEE
Confidence 86432100 0011233455554 3567999999999999999999999998752 3 45888
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002979 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+|. |+ ..+++++++++++. + ..+.+.+.++.+++..+|+.||+||+||..||||++.+|||+|
T Consensus 342 vG~-----G~--~~~~~~l~~l~~~~----~-----~~V~~~g~~~~~~~~~~~a~aDi~l~PS~~E~~Gl~~lEAma~- 404 (489)
T PRK14098 342 CGS-----GD--KEYEKRFQDFAEEH----P-----EQVSVQTEFTDAFFHLAIAGLDMLLMPGKIESCGMLQMFAMSY- 404 (489)
T ss_pred EeC-----CC--HHHHHHHHHHHHHC----C-----CCEEEEEecCHHHHHHHHHhCCEEEeCCCCCCchHHHHHHHhC-
Confidence 884 22 12445555555542 1 1345566788999999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCC-------CceEeCCCCHHHHHHHHHHHhcC--CHHHHHHHHHHhh
Q 002979 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-------GAIRVNPWDIDAVADAMTLAINM--RDSEKQLRHEKHY 525 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-------~ai~vnP~d~~~~A~ai~~aL~m--~~~e~~~r~~~~~ 525 (861)
+.|+|++..+|+.+.+. .|++++|.|++++|++|.+++.+ .++.++...++.
T Consensus 405 ------------------G~ppVv~~~GGl~d~v~~~~~~~~~G~l~~~~d~~~la~ai~~~l~~~~~~~~~~~~~~~~- 465 (489)
T PRK14098 405 ------------------GTIPVAYAGGGIVETIEEVSEDKGSGFIFHDYTPEALVAKLGEALALYHDEERWEELVLEA- 465 (489)
T ss_pred ------------------CCCeEEecCCCCceeeecCCCCCCceeEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHHHH-
Confidence 55689999999887762 48999999999999999998743 222222222211
Q ss_pred hhhccCCHhHHHHHHHHHHHHH
Q 002979 526 RYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 526 ~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
....+++..-++++++-.+++
T Consensus 466 -~~~~fsw~~~a~~y~~lY~~~ 486 (489)
T PRK14098 466 -MERDFSWKNSAEEYAQLYREL 486 (489)
T ss_pred -hcCCCChHHHHHHHHHHHHHH
Confidence 235678888888877655544
No 40
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=99.88 E-value=1.7e-21 Score=227.08 Aligned_cols=310 Identities=17% Similarity=0.202 Sum_probs=204.7
Q ss_pred HHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhhcC--CCeEEEEEecCCC----ChHHHhcCCchH-----
Q 002979 179 AYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRFN--RIKLGFFLHSPFP----SSEIYRTLPVRD----- 246 (861)
Q Consensus 179 ~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~~~--~~~i~~flH~PfP----~~e~f~~lp~r~----- 246 (861)
.|...++..++.+... .+| |+|++||+|-.++|.++++.+. ++|+.+..|...+ ..+.+..+....
T Consensus 110 r~~~f~~a~~~~~~~~~~~~--DiiH~hdw~~~~~~~~l~~~~~~~~~~~v~TiH~~~~~g~~~~~~~~~~~~~~~~~~~ 187 (473)
T TIGR02095 110 RFAFFSRAAAELLSGLGWQP--DVVHAHDWHTALVPALLKAVYRPNPIKTVFTIHNLAYQGVFPADDFSELGLPPEYFHM 187 (473)
T ss_pred HHHHHHHHHHHHHHhcCCCC--CEEEECCcHHHHHHHHHHhhccCCCCCEEEEcCCCccCCcCCHHHHHHcCCChHHcCc
Confidence 3444444444444321 345 8999999999999999988765 3899999997642 122222222110
Q ss_pred ----------HHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEE--ecCeEEEEEEecccCCchHHHHh
Q 002979 247 ----------EILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMGRLESV 314 (861)
Q Consensus 247 ----------~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~~~~~~ 314 (861)
-+..++..||.|-..+..|++..... ..|. +++ +..+..++.++|+|||.+.|.+.
T Consensus 188 ~~~~~~~~~~~~k~~~~~ad~v~tVS~~~~~ei~~~---~~~~---------~l~~~l~~~~~ki~~I~NGid~~~~~p~ 255 (473)
T TIGR02095 188 EGLEFYGRVNFLKGGIVYADRVTTVSPTYAREILTP---EFGY---------GLDGVLKARSGKLRGILNGIDTEVWNPA 255 (473)
T ss_pred hhhhcCCchHHHHHHHHhCCcCeecCHhHHHHhcCC---cCCc---------cchhHHHhcCCCeEEEeCCCCccccCCC
Confidence 12335556666666666665544321 0000 010 01133467889999999988632
Q ss_pred hCCc-----------hhHHHHHHHHHHcC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecC
Q 002979 315 LNLP-----------ATATKIKEIEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNP 378 (861)
Q Consensus 315 ~~~~-----------~~~~~~~~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p 378 (861)
.... ........+++++. ++++|++|||+.+.||+..+++|++++.++. +.|+.+|..
T Consensus 256 ~~~~~~~~~~~~~~~~k~~~k~~l~~~~gl~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lvi~G~g 329 (473)
T TIGR02095 256 TDPYLKANYSADDLAGKAENKEALQEELGLPVDDDVPLFGVISRLTQQKGVDLLLAALPELLELG------GQLVVLGTG 329 (473)
T ss_pred CCcccccCcCccchhhhhhhHHHHHHHcCCCccCCCCEEEEEecCccccChHHHHHHHHHHHHcC------cEEEEECCC
Confidence 1100 01122345666662 6789999999999999999999999987642 448888742
Q ss_pred CCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002979 379 ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 379 ~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
+ +++++++.+++.+. +. .++ +....+.+++..+|+.||++++||..||||++.+|||+|
T Consensus 330 -----~--~~~~~~l~~~~~~~----~~----~v~-~~~~~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~----- 388 (473)
T TIGR02095 330 -----D--PELEEALRELAERY----PG----NVR-VIIGYDEALAHLIYAGADFILMPSRFEPCGLTQLYAMRY----- 388 (473)
T ss_pred -----C--HHHHHHHHHHHHHC----CC----cEE-EEEcCCHHHHHHHHHhCCEEEeCCCcCCcHHHHHHHHHC-----
Confidence 1 23455566655432 21 133 334567888899999999999999999999999999999
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCC---------CceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHhhh
Q 002979 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLS---------GAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYR 526 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---------~ai~vnP~d~~~~A~ai~~aL~m---~~~e~~~r~~~~~~ 526 (861)
+.|+|+|..+|..+.+. .|++++|.|++++|++|.+++.+ .++.++.+.++..
T Consensus 389 --------------G~pvI~s~~gg~~e~v~~~~~~~~~~~G~l~~~~d~~~la~~i~~~l~~~~~~~~~~~~~~~~~~- 453 (473)
T TIGR02095 389 --------------GTVPIVRRTGGLADTVVDGDPEAESGTGFLFEEYDPGALLAALSRALRLYRQDPSLWEALQKNAM- 453 (473)
T ss_pred --------------CCCeEEccCCCccceEecCCCCCCCCceEEeCCCCHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh-
Confidence 55799999999998882 37999999999999999999874 3333333333322
Q ss_pred hhccCCHhHHHHHHHHHHH
Q 002979 527 YVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 527 ~v~~~~~~~W~~~fl~~l~ 545 (861)
...+++...++++++-.+
T Consensus 454 -~~~fsw~~~a~~~~~~Y~ 471 (473)
T TIGR02095 454 -SQDFSWDKSAKQYVELYR 471 (473)
T ss_pred -ccCCCcHHHHHHHHHHHH
Confidence 246788888887765443
No 41
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=99.88 E-value=1.5e-21 Score=222.32 Aligned_cols=300 Identities=15% Similarity=0.143 Sum_probs=201.8
Q ss_pred HHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCC--hHH-Hh-cCCc--------hH
Q 002979 179 AYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPS--SEI-YR-TLPV--------RD 246 (861)
Q Consensus 179 ~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~--~e~-f~-~lp~--------r~ 246 (861)
....+-+.......+.++| |+|+.| +.+....+|++.+|++++..++|..+-. .+. |. ..+. +.
T Consensus 70 ~~~~~~~~~~~~~~~~~~p--dvi~~h--~~~~~~~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (396)
T cd03818 70 RGQAVARALLALRAKGFRP--DVIVAH--PGWGETLFLKDVWPDAPLIGYFEFYYRAEGADVGFDPEFPPSLDDALRLRN 145 (396)
T ss_pred HHHHHHHHHHHHHhcCCCC--CEEEEC--CccchhhhHHHhCCCCCEEEEEeeeecCCCCCCCCCCCCCCchhHHHHHHH
Confidence 3344433333333444567 899999 6777778899999999998888744311 110 10 1111 11
Q ss_pred H---HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHH
Q 002979 247 E---ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATK 323 (861)
Q Consensus 247 ~---il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~ 323 (861)
. ++..+-.||.+-..+....+.|.. ... .++.++|+|||.+.|.+.. ..
T Consensus 146 ~~~~~~~~~~~ad~vi~~s~~~~~~~~~--------------------~~~--~ki~vI~ngvd~~~f~~~~---~~--- 197 (396)
T cd03818 146 RNALILLALAQADAGVSPTRWQRSTFPA--------------------ELR--SRISVIHDGIDTDRLRPDP---QA--- 197 (396)
T ss_pred hhhHhHHHHHhCCEEECCCHHHHhhCcH--------------------hhc--cceEEeCCCccccccCCCc---hh---
Confidence 1 234566777777666543333221 011 3578899999998885321 11
Q ss_pred HHHHHHH---cCCCeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhH---HHHHHHHHHHH
Q 002979 324 IKEIEKQ---FDGKKLILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKD---VQEAKKETYLT 396 (861)
Q Consensus 324 ~~~l~~~---~~~~~vil~Vdr-ld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~---~~~~~~~v~~l 396 (861)
...++.. ..++++|++++| +.+.||+..+++|+.++.+++|+++ |+.+|......+.. ..++++ ++
T Consensus 198 ~~~~~~~~~~~~~~~~i~~vgR~l~~~Kg~~~ll~a~~~l~~~~~~~~----lvivG~~~~~~g~~~~~~~~~~~---~~ 270 (396)
T cd03818 198 RLRLPNGRVLTPGDEVITFVARNLEPYRGFHVFMRALPRLLRARPDAR----VVIVGGDGVSYGAPPPDGESWKQ---HM 270 (396)
T ss_pred hhcccccccCCCCCeEEEEECCCcccccCHHHHHHHHHHHHHHCCCcE----EEEEcCCCcccCCCCCCcccHHH---HH
Confidence 1111111 146789999998 9999999999999999999999877 88888532111110 011121 22
Q ss_pred HHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceE
Q 002979 397 AKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSML 476 (861)
Q Consensus 397 ~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~l 476 (861)
.++++.+.+ .+.+.|.|.++.+++.++|+.||++|+||..||+|++++||||| +.|+
T Consensus 271 ~~~~~~~~~----~~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~-------------------G~PV 327 (396)
T cd03818 271 LDELGGRLD----LSRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMAC-------------------GCLV 327 (396)
T ss_pred HHHhhcccC----cceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHC-------------------CCCE
Confidence 222222221 13566788999999999999999999999999999999999999 5569
Q ss_pred EeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHH
Q 002979 477 VVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFA 541 (861)
Q Consensus 477 V~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl 541 (861)
|+|..+|..+.+. .|++++|.|++++|++|.++++.+ +++....++.++++.+ +++...+++++
T Consensus 328 Ias~~~g~~e~i~~~~~G~lv~~~d~~~la~~i~~ll~~~-~~~~~l~~~ar~~~~~~fs~~~~~~~~~ 395 (396)
T cd03818 328 VGSDTAPVREVITDGENGLLVDFFDPDALAAAVIELLDDP-ARRARLRRAARRTALRYDLLSVCLPRQL 395 (396)
T ss_pred EEcCCCCchhhcccCCceEEcCCCCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhccHHHHHHHHh
Confidence 9999988888883 489999999999999999999854 5566667777777766 77666666554
No 42
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.88 E-value=1.4e-21 Score=209.11 Aligned_cols=220 Identities=16% Similarity=0.082 Sum_probs=145.5
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcce--
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE-- 669 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~~-- 669 (861)
+|++|+||||++ .++...+.++++|+++ ++.|+.|+++|||+...+..++..+. ..++|++||++|...++..
T Consensus 1 li~~DlDGTll~---~~~~~~~~~~~~i~~l-~~~g~~~~~~TgR~~~~~~~~~~~~~~~~~~I~~NGa~i~~~~~~~~~ 76 (256)
T TIGR01486 1 WIFTDLDGTLLD---PHGYDWGPAKEVLERL-QELGIPVIPCTSKTAAEVEYLRKELGLEDPFIVENGGAIYGPRGWFTE 76 (256)
T ss_pred CEEEcCCCCCcC---CCCcCchHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCcEEEcCCeEEEeCCCcccC
Confidence 589999999999 5653445799999999 78999999999999999999997765 3479999999998765421
Q ss_pred ---EEecCCccChHHHHHHHHHHHHHhhcCCCceEe-eccc--------eeEee------eccCCccchhccHHHHHHHH
Q 002979 670 ---WETNHLGADLEWKKIVEPVMRSYTEATDGSNIE-IKES--------ALVWH------HQDADPDFGSCQAKELLDHL 731 (861)
Q Consensus 670 ---~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie-~k~~--------~l~~~------~~~~d~~~~~~~a~el~~~L 731 (861)
|... ....+ +.+..+++.+.+..+..+.. .... .+... ...... .... ..+..+.+
T Consensus 77 ~~~~~~~---~~i~~-~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 150 (256)
T TIGR01486 77 PEYPVIA---LGIPY-EKIRARLEELSEELGFKFRGLGDLTDAEIAELTGLSRELAALAQRREYSE-TILW-SEERRERF 150 (256)
T ss_pred CCeEEEE---cCCCH-HHHHHHHHHHHHHhCCCccchhhCCHHHHHHHhCcCHHHHHHHhhCccCC-ceec-ChHHHHHH
Confidence 1111 11122 34444444332211110000 0000 00000 000000 0001 12334444
Q ss_pred HHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCC--CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCc
Q 002979 732 ESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRP--PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPE 809 (861)
Q Consensus 732 ~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~--~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~ 809 (861)
.+.+......+..+..++||.|++++||.|++++++++ |++ .+++++|||+.||++||+.+|.
T Consensus 151 ~~~~~~~~~~~~~s~~~~ei~~~~~~Kg~ai~~l~~~~---~i~~~~~~~~a~GD~~ND~~Ml~~ag~------------ 215 (256)
T TIGR01486 151 TEALVELGLEVTHGNRFYHVLGAGSDKGKAANALKQFY---NQPGGAIKVVGLGDSPNDLPLLEVVDL------------ 215 (256)
T ss_pred HHHHHHcCCEEEeCCceEEEecCCCCHHHHHHHHHHHH---hhcCCCceEEEEcCCHhhHHHHHHCCE------------
Confidence 44444444455555679999999999999999999999 998 9999999999999999999996
Q ss_pred eEEEEeCCCC-----cc----cc-eec--CCHhHHHHHHHHH
Q 002979 810 IFACTVGRKP-----SK----AK-YYL--DDATDVLKLLQGL 839 (861)
Q Consensus 810 ~~av~vG~~~-----s~----Ak-y~l--~d~~eV~~~L~~L 839 (861)
+|+|||++ -+ |. |++ ++.++|.+.|+.+
T Consensus 216 --~vam~Na~~~~~~lk~~~~a~~~vt~~~~~dGva~~l~~~ 255 (256)
T TIGR01486 216 --AVVVPGPNGPNVSLKPGDPGSFLLTPAPGPEGWREALEHL 255 (256)
T ss_pred --EEEeCCCCCCccccCccCCCcEEEcCCCCcHHHHHHHHHh
Confidence 78888764 12 33 666 3578899999876
No 43
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=99.88 E-value=1.1e-20 Score=215.66 Aligned_cols=286 Identities=16% Similarity=0.149 Sum_probs=206.2
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhc---CCc--hHHHH--HHhhcCCEEeecChHhHHHHHHH
Q 002979 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRT---LPV--RDEIL--RGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~---lp~--r~~il--~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
|+|++|++.-.+++.++++ ..+.|+.+.+|..++-...+.. .|. ...++ ..+-.+|.+.+.+...++.+...
T Consensus 103 Diih~h~~~~~~~~~~~~~-~~~~p~v~t~h~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~d~vi~~s~~~~~~~~~~ 181 (405)
T TIGR03449 103 DLIHSHYWLSGQVGWLLRD-RWGVPLVHTAHTLAAVKNAALADGDTPEPEARRIGEQQLVDNADRLIANTDEEARDLVRH 181 (405)
T ss_pred CeEEechHHHHHHHHHHHH-hcCCCEEEeccchHHHHHHhccCCCCCchHHHHHHHHHHHHhcCeEEECCHHHHHHHHHH
Confidence 9999998665555555554 4468899999965432221111 111 11222 23457899999998877776641
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 349 (861)
. + ....++.++|+|||.+.|... + ....++++ .++++|+++||+.+.||+
T Consensus 182 ~----~---------------~~~~ki~vi~ngvd~~~~~~~----~----~~~~~~~~~~~~~~~~i~~~G~l~~~K~~ 234 (405)
T TIGR03449 182 Y----D---------------ADPDRIDVVAPGADLERFRPG----D----RATERARLGLPLDTKVVAFVGRIQPLKAP 234 (405)
T ss_pred c----C---------------CChhhEEEECCCcCHHHcCCC----c----HHHHHHhcCCCCCCcEEEEecCCCcccCH
Confidence 1 1 122367789999999887521 1 11233444 467899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCCh-hHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSG-KDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~-~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
..+++|++++++++|+. ++.|+++|.+.. ++ +..+++++ ++++. +..+.+.+.|.++.+++..+|
T Consensus 235 ~~li~a~~~l~~~~~~~--~~~l~ivG~~~~-~g~~~~~~l~~----~~~~~-------~l~~~v~~~g~~~~~~~~~~l 300 (405)
T TIGR03449 235 DVLLRAVAELLDRDPDR--NLRVIVVGGPSG-SGLATPDALIE----LAAEL-------GIADRVRFLPPRPPEELVHVY 300 (405)
T ss_pred HHHHHHHHHHHhhCCCc--ceEEEEEeCCCC-CcchHHHHHHH----HHHHc-------CCCceEEECCCCCHHHHHHHH
Confidence 99999999999998873 467898886542 23 33334443 33332 344567788899999999999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHH
Q 002979 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~a 505 (861)
+.||+|++||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|++++|++
T Consensus 301 ~~ad~~v~ps~~E~~g~~~lEAma~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~la~~ 361 (405)
T TIGR03449 301 RAADVVAVPSYNESFGLVAMEAQAC-------------------GTPVVAARVGGLPVAVADGETGLLVDGHDPADWADA 361 (405)
T ss_pred HhCCEEEECCCCCCcChHHHHHHHc-------------------CCCEEEecCCCcHhhhccCCceEECCCCCHHHHHHH
Confidence 9999999999999999999999999 45689999988887773 3799999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002979 506 MTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
|.++++. ++++..+.+..++.+..+++...++.+++-+.++
T Consensus 362 i~~~l~~-~~~~~~~~~~~~~~~~~fsw~~~~~~~~~~y~~~ 402 (405)
T TIGR03449 362 LARLLDD-PRTRIRMGAAAVEHAAGFSWAATADGLLSSYRDA 402 (405)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHH
Confidence 9999974 4455555666677777889999888888766553
No 44
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.88 E-value=1e-21 Score=209.23 Aligned_cols=217 Identities=17% Similarity=0.250 Sum_probs=147.9
Q ss_pred eEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCc--eEecCcEEEEeCCcc
Q 002979 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLG--IAAEHGYFIRWNKTS 668 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lg--liaenG~~i~~~~~~ 668 (861)
.+|++||||||+++.+.+...++++.++++++ .++|+.|+++|||+...+..+...++ ..+ +|++||+.|..++..
T Consensus 2 ~li~tDlDGTLl~~~~~~~~~~~~~~~~i~~~-~~~gi~fv~aTGR~~~~~~~~~~~~~~~~p~~~I~~NGa~I~~~~~~ 80 (249)
T TIGR01485 2 LLLVSDLDNTLVDHTDGDNQALLRLNALLEDH-RGEDSLLVYSTGRSPHSYKELQKQKPLLTPDIWVTSVGSEIYYGGAE 80 (249)
T ss_pred eEEEEcCCCcCcCCCCCChHHHHHHHHHHHHh-hccCceEEEEcCCCHHHHHHHHhcCCCCCCCEEEEcCCceEEeCCCC
Confidence 48999999999974334577889999999998 79999999999999999999865433 123 789999999876521
Q ss_pred eEEecCCccChHHHH---------HHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC-
Q 002979 669 EWETNHLGADLEWKK---------IVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE- 738 (861)
Q Consensus 669 ~~~~~~~~~~~~w~~---------~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~- 738 (861)
..+..|.. .+..+...+....+......+...+.+..... ...+.++.+.+.+...
T Consensus 81 -------~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~k~~~~~~~~-------~~~~~~~~l~~~l~~~~ 146 (249)
T TIGR01485 81 -------VPDQHWAEYLSEKWQRDIVVAITDKFEELKPQPDLEQRPHKVSFFLDPE-------AAPEVIKQLTEMLKETG 146 (249)
T ss_pred -------cCCHHHHHHHhcccCHHHHHHHHhcCcccccCCccccCCeeEEEEechh-------hhhHHHHHHHHHHHhcC
Confidence 11222221 12222222222223332333334444443221 1223444455444432
Q ss_pred --CEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC
Q 002979 739 --PAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG 816 (861)
Q Consensus 739 --~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (861)
...+.++..++||.|++++|+.|++++++++ |++++++++|||+.||++||+.++. .+|+|+
T Consensus 147 ~~~~~~~~~~~~ldi~~~~~~K~~al~~l~~~~---~i~~~~~i~~GD~~ND~~ml~~~~~-------------~~va~~ 210 (249)
T TIGR01485 147 LDVKLIYSSGKDLDILPQGSGKGQALQYLLQKL---AMEPSQTLVCGDSGNDIELFEIGSV-------------RGVIVS 210 (249)
T ss_pred CCEEEEEECCceEEEEeCCCChHHHHHHHHHHc---CCCccCEEEEECChhHHHHHHccCC-------------cEEEEC
Confidence 2345678899999999999999999999999 9999999999999999999998542 378888
Q ss_pred CCCcccc-----------eecC--CHhHHHHHHHHH
Q 002979 817 RKPSKAK-----------YYLD--DATDVLKLLQGL 839 (861)
Q Consensus 817 ~~~s~Ak-----------y~l~--d~~eV~~~L~~L 839 (861)
|+....+ |+.+ .++++++.|+.+
T Consensus 211 na~~~~k~~~~~~~~~~~~~~~~~~~~Gi~e~l~~~ 246 (249)
T TIGR01485 211 NAQEELLQWYDENAKDKIYHASERCAGGIIEAIAHF 246 (249)
T ss_pred CCHHHHHHHHHhcccCcEEEecCCCcHHHHHHHHHc
Confidence 8632111 5444 358888888765
No 45
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=99.88 E-value=4.1e-21 Score=218.87 Aligned_cols=282 Identities=15% Similarity=0.130 Sum_probs=197.6
Q ss_pred HHHcCCCCCEEEEeCccccc-HHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHH-hhcCCEEeecChHhHHHH
Q 002979 192 MEVINPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRG-LLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~-ll~~dligF~t~~~~~~F 269 (861)
++..+| |+|++|+++-.+ ....+..+..++|+.+..|..|+..+.... +...+.+. +-.+|.+-+.+....+.+
T Consensus 84 ~~~~~~--DiIh~~~~~~~~~~~~~~~~~~~~~~~v~t~h~~~~~~~~~~~--~~~~~~~~~~~~~d~ii~~s~~~~~~~ 159 (398)
T cd03796 84 LIRERI--TIVHGHQAFSALAHEALLHARTMGLKTVFTDHSLFGFADASSI--HTNKLLRFSLADVDHVICVSHTSKENT 159 (398)
T ss_pred HHhcCC--CEEEECCCCchHHHHHHHHhhhcCCcEEEEecccccccchhhH--HhhHHHHHhhccCCEEEEecHhHhhHH
Confidence 334466 999999987543 334444455568999999987753332111 11222222 346788888777655544
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002979 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
.... + ....++.++|+|+|.+.|..... . ..+++++|+++||+.+.||+
T Consensus 160 ~~~~----~---------------~~~~k~~vi~ngvd~~~f~~~~~-----~-------~~~~~~~i~~~grl~~~Kg~ 208 (398)
T cd03796 160 VLRA----S---------------LDPERVSVIPNAVDSSDFTPDPS-----K-------RDNDKITIVVISRLVYRKGI 208 (398)
T ss_pred HHHh----C---------------CChhhEEEEcCccCHHHcCCCcc-----c-------CCCCceEEEEEeccchhcCH
Confidence 3210 1 11235678899999988753211 0 12567899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002979 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
..+++|+..+.+++|+++ |+.+|. ++..+++++.++ + .+..+.+.+.|.++.+++.++|+
T Consensus 209 ~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~l~~~~~----~-------~~l~~~v~~~G~~~~~~~~~~l~ 268 (398)
T cd03796 209 DLLVGIIPEICKKHPNVR----FIIGGD-----GPKRILLEEMRE----K-------YNLQDRVELLGAVPHERVRDVLV 268 (398)
T ss_pred HHHHHHHHHHHhhCCCEE----EEEEeC-----CchHHHHHHHHH----H-------hCCCCeEEEeCCCCHHHHHHHHH
Confidence 999999999988888866 888873 344344443333 2 23345566778999999999999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CC-ceEeCCCCHHHHHHHHH
Q 002979 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SG-AIRVNPWDIDAVADAMT 507 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~-ai~vnP~d~~~~A~ai~ 507 (861)
.||++|+||..||||++.+|||+| |.|+|+|..+|..+.+ ++ +++++| |.++++++|.
T Consensus 269 ~ad~~v~pS~~E~~g~~~~EAma~-------------------G~PVI~s~~gg~~e~i~~~~~~~~~~-~~~~l~~~l~ 328 (398)
T cd03796 269 QGHIFLNTSLTEAFCIAIVEAASC-------------------GLLVVSTRVGGIPEVLPPDMILLAEP-DVESIVRKLE 328 (398)
T ss_pred hCCEEEeCChhhccCHHHHHHHHc-------------------CCCEEECCCCCchhheeCCceeecCC-CHHHHHHHHH
Confidence 999999999999999999999999 5568999999988877 33 344544 9999999999
Q ss_pred HHhcCCHHHHHHHHHHhhh-hhccCCHhHHHHHHHHHHHHHHH
Q 002979 508 LAINMRDSEKQLRHEKHYR-YVSTHDVAYWARSFAQDLERACR 549 (861)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~-~v~~~~~~~W~~~fl~~l~~~~~ 549 (861)
+++.++.+.+.. .++.++ ....+++..-++++++..+++..
T Consensus 329 ~~l~~~~~~~~~-~~~~~~~~~~~fs~~~~~~~~~~~y~~l~~ 370 (398)
T cd03796 329 EAISILRTGKHD-PWSFHNRVKKMYSWEDVAKRTEKVYDRILQ 370 (398)
T ss_pred HHHhChhhhhhH-HHHHHHHHHhhCCHHHHHHHHHHHHHHHhc
Confidence 999865544333 344444 44568899889988887776543
No 46
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.88 E-value=3.3e-21 Score=208.20 Aligned_cols=225 Identities=16% Similarity=0.100 Sum_probs=149.7
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc
Q 002979 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~ 667 (861)
.++|+|++|+||||++ .++.+++.++++|++| ++.|+.++++|||+...+...+..+. ..++++.||++|+.+++
T Consensus 2 ~~~kli~~DlDGTLl~---~~~~~~~~~~~ai~~l-~~~Gi~~~iaTgR~~~~~~~~~~~l~l~~~~i~~nGa~i~~~~~ 77 (273)
T PRK00192 2 MMKLLVFTDLDGTLLD---HHTYSYEPAKPALKAL-KEKGIPVIPCTSKTAAEVEVLRKELGLEDPFIVENGAAIYIPKN 77 (273)
T ss_pred CcceEEEEcCcccCcC---CCCcCcHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHcCCCCCEEEEcCcEEEeccc
Confidence 4689999999999999 6778889999999999 79999999999999999999887764 23689999999987543
Q ss_pred c---------------eEEecCCccChHHHHHHHHHHHHHhhcCCCce-Eeec----cc----eeEe---e-ecc--CCc
Q 002979 668 S---------------EWETNHLGADLEWKKIVEPVMRSYTEATDGSN-IEIK----ES----ALVW---H-HQD--ADP 717 (861)
Q Consensus 668 ~---------------~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~-ie~k----~~----~l~~---~-~~~--~d~ 717 (861)
. .+...++ .+.+.++++.+........ .... +. .+.. . ... ...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (273)
T PRK00192 78 YFPFQPDGERLKGDYWVIELGPP------YEELREILDEISDELGYPLKGFGDLSAEEVAELTGLSGESARLAKDREFSE 151 (273)
T ss_pred ccccCCccccccCCceEEEcCCC------HHHHHHHHHHHHHHhCCCeeehhhCCHHHHHHHhCcCHHHHHHHHhcccCC
Confidence 1 1121111 1233333332211100000 0000 00 0000 0 000 000
Q ss_pred cchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCC-CeEEEEeCCcchHHHHHHcc
Q 002979 718 DFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPP-DFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 718 ~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag 796 (861)
.+......+..+.+.+.+...++.+..+..++||.|++ +||.|++++++++ |+++ +++++|||+.||++||+.+|
T Consensus 152 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ei~~~~-~Kg~al~~l~~~~---~i~~~~~v~~~GDs~NDi~m~~~ag 227 (273)
T PRK00192 152 PFLWNGSEAAKERFEEALKRLGLKVTRGGRFLHLLGGG-DKGKAVRWLKELY---RRQDGVETIALGDSPNDLPMLEAAD 227 (273)
T ss_pred ceeecCchHHHHHHHHHHHHcCCEEEECCeEEEEeCCC-CHHHHHHHHHHHH---hccCCceEEEEcCChhhHHHHHhCC
Confidence 00000112344445544544455555667899999999 9999999999999 9999 99999999999999999999
Q ss_pred ccCCCCCCCCCCceEEEEeCCCC--------ccc-ceec----CCHhHHHHHHHHHHh
Q 002979 797 STVSGPSLPVPPEIFACTVGRKP--------SKA-KYYL----DDATDVLKLLQGLAT 841 (861)
Q Consensus 797 ~~~~~~~~~~~~~~~av~vG~~~--------s~A-ky~l----~d~~eV~~~L~~L~~ 841 (861)
. +|+|||++ ..| ++.. ++.++|++.|+.+..
T Consensus 228 ~--------------~vam~NA~~~~k~~~~~~a~~~v~~~~~~~~~Gv~~~l~~~~~ 271 (273)
T PRK00192 228 I--------------AVVVPGPDGPNPPLLPGIADGEFILASAPGPEGWAEAINKLLS 271 (273)
T ss_pred e--------------eEEeCCCCCCCcccCccccCCceEEecCCCcHHHHHHHHHHHh
Confidence 6 78888864 223 3544 347899999998753
No 47
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=99.88 E-value=5.1e-21 Score=218.34 Aligned_cols=273 Identities=18% Similarity=0.120 Sum_probs=197.8
Q ss_pred CEEEEeCcccccHHHHHHhh-cCCCeEEEEEecCCCC-hHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHh
Q 002979 200 DCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSPFPS-SEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRML 277 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~PfP~-~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~l 277 (861)
|+|+.|.-+.-.+..++++. ....++.+++|-+-.. ..+.. ..+..+-+.+-.+|.|-..+....+.+.+ +
T Consensus 120 diihaH~~~~~~~~~~~~~~~~~~~~~~~t~Hg~d~~~~~~~~--~~~~~~~~~~~~ad~vv~~S~~~~~~l~~-----~ 192 (406)
T PRK15427 120 DVFIAHFGPAGVTAAKLRELGVLRGKIATIFHGIDISSREVLN--HYTPEYQQLFRRGDLMLPISDLWAGRLQK-----M 192 (406)
T ss_pred CEEEEcCChHHHHHHHHHHhCCCCCCeEEEEcccccccchhhh--hhhHHHHHHHHhCCEEEECCHHHHHHHHH-----c
Confidence 89999987766667777653 2245677788864221 11110 11122333345688887766544433321 1
Q ss_pred CCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHH
Q 002979 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAME 357 (861)
Q Consensus 278 g~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~ 357 (861)
|. ...+|.++|+|||.+.|..... ....+...|++|||+.+.||+..+++|++
T Consensus 193 g~---------------~~~ki~vi~nGvd~~~f~~~~~------------~~~~~~~~il~vGrl~~~Kg~~~ll~a~~ 245 (406)
T PRK15427 193 GC---------------PPEKIAVSRMGVDMTRFSPRPV------------KAPATPLEIISVARLTEKKGLHVAIEACR 245 (406)
T ss_pred CC---------------CHHHEEEcCCCCCHHHcCCCcc------------ccCCCCeEEEEEeCcchhcCHHHHHHHHH
Confidence 21 1235677899999988742110 01234567999999999999999999999
Q ss_pred HHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceec
Q 002979 358 QLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (861)
Q Consensus 358 ~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvt 437 (861)
.+.+++|+++ |+.+| +|+..+++++.++ + .+..+.+.+.|.++++|+..+|+.||+||+|
T Consensus 246 ~l~~~~~~~~----l~ivG-----~G~~~~~l~~~~~----~-------~~l~~~V~~~G~~~~~el~~~l~~aDv~v~p 305 (406)
T PRK15427 246 QLKEQGVAFR----YRILG-----IGPWERRLRTLIE----Q-------YQLEDVVEMPGFKPSHEVKAMLDDADVFLLP 305 (406)
T ss_pred HHHhhCCCEE----EEEEE-----CchhHHHHHHHHH----H-------cCCCCeEEEeCCCCHHHHHHHHHhCCEEEEC
Confidence 9988888765 88888 3444444444433 3 2345678899999999999999999999999
Q ss_pred ccc------cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHH
Q 002979 438 AVR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 438 S~~------EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~ 508 (861)
|.. ||++++.+|||+| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.+
T Consensus 306 S~~~~~g~~Eg~p~~llEAma~-------------------G~PVI~t~~~g~~E~v~~~~~G~lv~~~d~~~la~ai~~ 366 (406)
T PRK15427 306 SVTGADGDMEGIPVALMEAMAV-------------------GIPVVSTLHSGIPELVEADKSGWLVPENDAQALAQRLAA 366 (406)
T ss_pred CccCCCCCccCccHHHHHHHhC-------------------CCCEEEeCCCCchhhhcCCCceEEeCCCCHHHHHHHHHH
Confidence 984 9999999999999 45699999999888873 4899999999999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHH
Q 002979 509 AINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLE 545 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~ 545 (861)
++++++++++.+.++.++++. .+++...++++.+-++
T Consensus 367 l~~~d~~~~~~~~~~ar~~v~~~f~~~~~~~~l~~~~~ 404 (406)
T PRK15427 367 FSQLDTDELAPVVKRAREKVETDFNQQVINRELASLLQ 404 (406)
T ss_pred HHhCCHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 999788777777888888874 4888888888776654
No 48
>PRK14099 glycogen synthase; Provisional
Probab=99.87 E-value=9.8e-21 Score=220.03 Aligned_cols=298 Identities=18% Similarity=0.174 Sum_probs=191.3
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhh-cCCCeEEEEEecC-----CCChHHHhc--CCch-------------HHHHHHhh
Q 002979 195 INPDDDCVWVHDYHLMVLPTFLRKR-FNRIKLGFFLHSP-----FPSSEIYRT--LPVR-------------DEILRGLL 253 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~-~~~~~i~~flH~P-----fP~~e~f~~--lp~r-------------~~il~~ll 253 (861)
++| |+|++||+|--++|.+|+.+ ..+.++.++.|.. ||. +.+.. +|.. .-+..++.
T Consensus 132 ~~p--DIiH~Hdw~~~l~~~~l~~~~~~~~~~V~TiHn~~~qg~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~i~ 208 (485)
T PRK14099 132 FVP--DIVHAHDWQAGLAPAYLHYSGRPAPGTVFTIHNLAFQGQFPR-ELLGALGLPPSAFSLDGVEYYGGIGYLKAGLQ 208 (485)
T ss_pred CCC--CEEEECCcHHHHHHHHHHhCCCCCCCEEEeCCCCCCCCcCCH-HHHHHcCCChHHcCchhhhhCCCccHHHHHHH
Confidence 466 99999999999999999743 3467899999964 322 11111 1110 01334455
Q ss_pred cCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCc-------h----hHH
Q 002979 254 NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLP-------A----TAT 322 (861)
Q Consensus 254 ~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~-------~----~~~ 322 (861)
.||.|---+..|++.....-. -.|++. .+..+..++.++|+|||.+.|.+..... + ...
T Consensus 209 ~ad~vitVS~~~a~ei~~~~~-g~gl~~---------~l~~~~~ki~vI~NGID~~~f~p~~~~~~~~~~~~~~~~~k~~ 278 (485)
T PRK14099 209 LADRITTVSPTYALEIQGPEA-GMGLDG---------LLRQRADRLSGILNGIDTAVWNPATDELIAATYDVETLAARAA 278 (485)
T ss_pred hcCeeeecChhHHHHHhcccC-CcChHH---------HHHhhCCCeEEEecCCchhhccccccchhhhcCChhHHHhHHH
Confidence 566655555555543322000 000000 0011234678899999999886432100 0 011
Q ss_pred HHHHHHHHcC-----CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHH
Q 002979 323 KIKEIEKQFD-----GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTA 397 (861)
Q Consensus 323 ~~~~l~~~~~-----~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~ 397 (861)
....+++++. +.+++++|+|+.+.||+..+++|+++++++ + +.|+.+|. |+ .++++++++++
T Consensus 279 ~k~~l~~~~gl~~~~~~~li~~VgRL~~~KG~d~Li~A~~~l~~~--~----~~lvivG~-----G~--~~~~~~l~~l~ 345 (485)
T PRK14099 279 NKAALQARFGLDPDPDALLLGVISRLSWQKGLDLLLEALPTLLGE--G----AQLALLGS-----GD--AELEARFRAAA 345 (485)
T ss_pred hHHHHHHHcCCCcccCCcEEEEEecCCccccHHHHHHHHHHHHhc--C----cEEEEEec-----CC--HHHHHHHHHHH
Confidence 1245666651 356888899999999999999999998753 3 44888874 22 23445555555
Q ss_pred HHHhhccCCCCcccEEEEcCCCCHHHHHHHH-HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceE
Q 002979 398 KRINEVYGSPNYEPVVLIDRPVPRFEKSAYY-AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSML 476 (861)
Q Consensus 398 ~~IN~~~~~~~~~pvv~~~~~v~~~el~aly-~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~l 476 (861)
.+. + ..++.+.+. .+++..+| +.||+||+||.+|||||+.+|||+| +.++
T Consensus 346 ~~~----~----~~v~~~~G~--~~~l~~~~~a~aDifv~PS~~E~fGl~~lEAma~-------------------G~pp 396 (485)
T PRK14099 346 QAY----P----GQIGVVIGY--DEALAHLIQAGADALLVPSRFEPCGLTQLCALRY-------------------GAVP 396 (485)
T ss_pred HHC----C----CCEEEEeCC--CHHHHHHHHhcCCEEEECCccCCCcHHHHHHHHC-------------------CCCc
Confidence 432 2 124456665 67888877 5799999999999999999999999 4467
Q ss_pred EeccCCCCcccC-C-----------CceEeCCCCHHHHHHHHHHHhc--CCHHHHHHHHHHhhhhhccCCHhHHHHHHHH
Q 002979 477 VVSEFIGCSPSL-S-----------GAIRVNPWDIDAVADAMTLAIN--MRDSEKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 477 V~Se~~G~~~~l-~-----------~ai~vnP~d~~~~A~ai~~aL~--m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
|+|..+|..+.+ . .|++|+|.|++++|++|.+++. ..++.++...++.+ ...+++..-++++++
T Consensus 397 Vvs~~GGl~d~V~~~~~~~~~~~~~~G~l~~~~d~~~La~ai~~a~~l~~d~~~~~~l~~~~~--~~~fSw~~~a~~y~~ 474 (485)
T PRK14099 397 VVARVGGLADTVVDANEMAIATGVATGVQFSPVTADALAAALRKTAALFADPVAWRRLQRNGM--TTDVSWRNPAQHYAA 474 (485)
T ss_pred EEeCCCCccceeecccccccccCCCceEEeCCCCHHHHHHHHHHHHHHhcCHHHHHHHHHHhh--hhcCChHHHHHHHHH
Confidence 889998988876 2 4899999999999999998543 13333333333332 356888888888877
Q ss_pred HHHHHHH
Q 002979 543 DLERACR 549 (861)
Q Consensus 543 ~l~~~~~ 549 (861)
-.+++.+
T Consensus 475 lY~~l~~ 481 (485)
T PRK14099 475 LYRSLVA 481 (485)
T ss_pred HHHHHHh
Confidence 6666543
No 49
>PTZ00174 phosphomannomutase; Provisional
Probab=99.87 E-value=6.3e-21 Score=202.84 Aligned_cols=198 Identities=16% Similarity=0.152 Sum_probs=128.5
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc--cC-CceEecCcEEEEeC
Q 002979 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EM-LGIAAEHGYFIRWN 665 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~-lgliaenG~~i~~~ 665 (861)
.++|+|++|+||||++ +++.++++++++|+++ +++|+.|+|||||++..+.+.++.. .. ..+++.||+.|+..
T Consensus 3 ~~~klia~DlDGTLL~---~~~~is~~~~~ai~~l-~~~Gi~~viaTGR~~~~i~~~l~~~~~~~~~~~I~~NGa~I~~~ 78 (247)
T PTZ00174 3 MKKTILLFDVDGTLTK---PRNPITQEMKDTLAKL-KSKGFKIGVVGGSDYPKIKEQLGEDVLEDFDYVFSENGLVAYKD 78 (247)
T ss_pred CCCeEEEEECcCCCcC---CCCCCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHhhhhhcccCeEEeCCceEEEEC
Confidence 4589999999999999 8889999999999999 7999999999999999998888532 12 25789999999976
Q ss_pred CcceEEecCCc-cChHHHHHHHHHHHHH-----hhcCCCceEeeccceeEeeec-cCC-----ccch-----hccHHHHH
Q 002979 666 KTSEWETNHLG-ADLEWKKIVEPVMRSY-----TEATDGSNIEIKESALVWHHQ-DAD-----PDFG-----SCQAKELL 728 (861)
Q Consensus 666 ~~~~~~~~~~~-~~~~w~~~v~~i~~~y-----~~~~~gs~ie~k~~~l~~~~~-~~d-----~~~~-----~~~a~el~ 728 (861)
+...+...+.. .+.++...+....+.+ .....+.+.+.........+. ... ..+. .....++.
T Consensus 79 ~~~i~~~~i~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (247)
T PTZ00174 79 GELFHSQSILKFLGEEKLKKFINFCLRYIADLDIPVKRGTFIEYRNGMINISPIGRNCSQEERDEFEKYDKEHHIREKFI 158 (247)
T ss_pred CeEEEEEcchhcCCHHHHHHHHHHHHHHHHhcCCccceeeeEEcCCceEEeccccccCCHHHHHHHHhcCCcchHHHHHH
Confidence 65555544321 2222222121222111 111123333322111111110 000 0000 01123455
Q ss_pred HHHHHHhcCCCEEEEE-cCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccc
Q 002979 729 DHLESVLANEPAVVKR-GQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILS 797 (861)
Q Consensus 729 ~~L~~~l~~~~~~v~~-g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~ 797 (861)
+.+.+.+.+..+.... +..++||.|+|+|||.|+++|+++ +++++|||| +.||++||+.++.
T Consensus 159 ~~l~~~~~~~~~~~s~~~~~~leI~~~gvsKg~al~~L~~~-------~~eviafGD~~~~~~NDieMl~~~~~ 225 (247)
T PTZ00174 159 QDLKKEFSDLGLKFSIGGQISFDVFPKGWDKTYCLRHLEND-------FKEIHFFGDKTFEGGNDYEIYNDPRT 225 (247)
T ss_pred HHHHHhcCCCCeEEEecCceEEEeeeCCCcHHHHHHHHHhh-------hhhEEEEcccCCCCCCcHhhhhcCCC
Confidence 5565555433333333 457999999999999999999986 489999999 8999999998765
No 50
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=99.87 E-value=1.2e-20 Score=219.36 Aligned_cols=285 Identities=16% Similarity=0.194 Sum_probs=199.3
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchH----HHHHHh-hcCCEEeecChHh
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD----EILRGL-LNCDLIGFHTFDY 265 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~----~il~~l-l~~dligF~t~~~ 265 (861)
+++..+| |+|++|+...+.++.++-.+..++|+.+.+|.-+|..-.....++.. .+.+.+ -.+|.|...+...
T Consensus 139 ~i~~~kp--DiIh~~~~~~~~~~~~~~ak~~~ip~V~~~h~~~~~~~~~~~~~~~~~~~~~~~r~~~~~ad~ii~~S~~~ 216 (465)
T PLN02871 139 EVARFKP--DLIHASSPGIMVFGALFYAKLLCVPLVMSYHTHVPVYIPRYTFSWLVKPMWDIIRFLHRAADLTLVTSPAL 216 (465)
T ss_pred HHHhCCC--CEEEECCCchhHHHHHHHHHHhCCCEEEEEecCchhhhhcccchhhHHHHHHHHHHHHhhCCEEEECCHHH
Confidence 3444577 89999987776666655444557889888887655321111111110 111222 3578887777766
Q ss_pred HHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc----CCCeEEEeec
Q 002979 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF----DGKKLILGID 341 (861)
Q Consensus 266 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~----~~~~vil~Vd 341 (861)
.+.+... +. ....++.++|+|||.+.|.+... . ..+++++ .++++|+++|
T Consensus 217 ~~~l~~~-----~~--------------~~~~kv~vi~nGvd~~~f~p~~~---~----~~~~~~~~~~~~~~~~i~~vG 270 (465)
T PLN02871 217 GKELEAA-----GV--------------TAANRIRVWNKGVDSESFHPRFR---S----EEMRARLSGGEPEKPLIVYVG 270 (465)
T ss_pred HHHHHHc-----CC--------------CCcCeEEEeCCccCccccCCccc---c----HHHHHHhcCCCCCCeEEEEeC
Confidence 6555430 10 01235678999999988853211 1 1223333 3678999999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCH
Q 002979 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421 (861)
Q Consensus 342 rld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~ 421 (861)
|+.+.||+..+++|++++ |+++ |+++| +|+..+++++ +++. . + +.|.|.++.
T Consensus 271 rl~~~K~~~~li~a~~~~----~~~~----l~ivG-----~G~~~~~l~~----~~~~-------~---~-V~f~G~v~~ 322 (465)
T PLN02871 271 RLGAEKNLDFLKRVMERL----PGAR----LAFVG-----DGPYREELEK----MFAG-------T---P-TVFTGMLQG 322 (465)
T ss_pred CCchhhhHHHHHHHHHhC----CCcE----EEEEe-----CChHHHHHHH----Hhcc-------C---C-eEEeccCCH
Confidence 999999999999888654 6554 88887 3444344333 3321 1 2 457789999
Q ss_pred HHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC------CceEeC
Q 002979 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS------GAIRVN 495 (861)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~------~ai~vn 495 (861)
+|+..+|+.||+||+||..||||++++||||| |.|+|+|..+|+.+.+. +|++++
T Consensus 323 ~ev~~~~~~aDv~V~pS~~E~~g~~vlEAmA~-------------------G~PVI~s~~gg~~eiv~~~~~~~~G~lv~ 383 (465)
T PLN02871 323 DELSQAYASGDVFVMPSESETLGFVVLEAMAS-------------------GVPVVAARAGGIPDIIPPDQEGKTGFLYT 383 (465)
T ss_pred HHHHHHHHHCCEEEECCcccccCcHHHHHHHc-------------------CCCEEEcCCCCcHhhhhcCCCCCceEEeC
Confidence 99999999999999999999999999999999 45699999999887763 379999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHH-HHHHHHhh
Q 002979 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD-LERACRDH 551 (861)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~-l~~~~~~~ 551 (861)
|.|++++|++|.++++ +++.++.+.++.++++.++++...++.+++. ..++...+
T Consensus 384 ~~d~~~la~~i~~ll~-~~~~~~~~~~~a~~~~~~fsw~~~a~~l~~~~Y~~~~~~~ 439 (465)
T PLN02871 384 PGDVDDCVEKLETLLA-DPELRERMGAAAREEVEKWDWRAATRKLRNEQYSAAIWFW 439 (465)
T ss_pred CCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999997 4556666677778888889999999999874 45554443
No 51
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.86 E-value=9.5e-21 Score=200.24 Aligned_cols=214 Identities=19% Similarity=0.220 Sum_probs=145.3
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccC-Cc--eEecCcEEEEeCCcce
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEM-LG--IAAEHGYFIRWNKTSE 669 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~-lg--liaenG~~i~~~~~~~ 669 (861)
+|++||||||++ .++.+++.+ ++++ + +++|+.++++|||+...+.+++..+.- .. ++++||+.|......
T Consensus 1 li~~DlDgTLl~---~~~~~~~~~-~~~~-~-~~~gi~~viaTGR~~~~v~~~~~~l~l~~~~~~I~~nGa~i~~~~~~- 73 (236)
T TIGR02471 1 LIITDLDNTLLG---DDEGLASFV-ELLR-G-SGDAVGFGIATGRSVESAKSRYAKLNLPSPDVLIARVGTEIYYGPEL- 73 (236)
T ss_pred CeEEeccccccC---CHHHHHHHH-HHHH-h-cCCCceEEEEeCCCHHHHHHHHHhCCCCCCCEEEECCCceEEeCCCC-
Confidence 589999999999 677777766 7777 5 789999999999999999999976531 23 899999988764321
Q ss_pred EEecCCccChHHHHHH-----HHHHHHHhhcCCCceEeeccc--eeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEE
Q 002979 670 WETNHLGADLEWKKIV-----EPVMRSYTEATDGSNIEIKES--ALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (861)
Q Consensus 670 ~~~~~~~~~~~w~~~v-----~~i~~~y~~~~~gs~ie~k~~--~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 742 (861)
..+..|.... ...+..+....+|..++.+.. ...+++...+... ....++.+.+.+. ......+
T Consensus 74 ------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~~~~~~~l~~~-~~~~~~~ 144 (236)
T TIGR02471 74 ------QPDRFWQKHIDHDWRRQAVVEALADIPGLTLQDDQEQGPFKISYLLDPEGE--PILPQIRQRLRQQ-SQAAKVI 144 (236)
T ss_pred ------CCChhHHHHHhcCCCHHHHHHHHhcCCCcEeCChhcCCCeeEEEEECcccc--hHHHHHHHHHHhc-cCCEEEE
Confidence 1111222111 011223333456655554432 2344443322111 1122333444332 1111235
Q ss_pred EEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----
Q 002979 743 KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---- 818 (861)
Q Consensus 743 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---- 818 (861)
.++..++|+.|+++||+.|++++++++ |++++++++|||+.||++||+.++. +++||++
T Consensus 145 ~~~~~~~ei~~~~~~K~~al~~l~~~~---g~~~~~~i~~GD~~nD~~ml~~~~~--------------~iav~na~~~~ 207 (236)
T TIGR02471 145 LSCGWFLDVLPLRASKGLALRYLSYRW---GLPLEQILVAGDSGNDEEMLRGLTL--------------GVVVGNHDPEL 207 (236)
T ss_pred EECCceEEEeeCCCChHHHHHHHHHHh---CCCHHHEEEEcCCccHHHHHcCCCc--------------EEEEcCCcHHH
Confidence 567788999999999999999999999 9999999999999999999999875 7788886
Q ss_pred Ccccc----eecC--CHhHHHHHHHHH
Q 002979 819 PSKAK----YYLD--DATDVLKLLQGL 839 (861)
Q Consensus 819 ~s~Ak----y~l~--d~~eV~~~L~~L 839 (861)
+..|+ |+++ +.++|.+.|+.+
T Consensus 208 k~~a~~~~~~v~~~~~~~Gv~~~i~~~ 234 (236)
T TIGR02471 208 EGLRHQQRIYFANNPHAFGILEGINHY 234 (236)
T ss_pred HHhhcCCcEEEcCCCChhHHHHHHHhh
Confidence 35566 6664 457899988764
No 52
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.85 E-value=7.4e-20 Score=206.39 Aligned_cols=207 Identities=13% Similarity=0.148 Sum_probs=157.2
Q ss_pred EEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002979 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 297 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
.++.++|+|||.+.|..... . .....++.+ .++.+|+++||+++.||+..+++|+..+++++|+...++.|+.
T Consensus 160 ~~~~vi~ngvd~~~~~~~~~---~--~~~~~~~~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~~~~~~~l~i 234 (374)
T TIGR03088 160 AKIHQIYNGVDTERFHPSRG---D--RSPILPPDFFADESVVVGTVGRLQAVKDQPTLVRAFALLVRQLPEGAERLRLVI 234 (374)
T ss_pred hhEEEeccCccccccCCCcc---c--hhhhhHhhcCCCCCeEEEEEecCCcccCHHHHHHHHHHHHHhCcccccceEEEE
Confidence 35677899999987752211 1 111112222 4678999999999999999999999999999987766788998
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002979 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+|. |+..+++++.+. + .+....+.+.|. .+++..+|+.||++|+||..||||++++|||+|
T Consensus 235 ~G~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~~~~adi~v~pS~~Eg~~~~~lEAma~- 295 (374)
T TIGR03088 235 VGD-----GPARGACEQMVR----A-------AGLAHLVWLPGE--RDDVPALMQALDLFVLPSLAEGISNTILEAMAS- 295 (374)
T ss_pred ecC-----CchHHHHHHHHH----H-------cCCcceEEEcCC--cCCHHHHHHhcCEEEeccccccCchHHHHHHHc-
Confidence 883 333334443333 2 234456777774 578999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-cc
Q 002979 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-ST 530 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~ 530 (861)
+.|+|+|..+|..+.+. .|++++|.|++++|++|.++++ .++++..+.++.++++ ..
T Consensus 296 ------------------G~Pvv~s~~~g~~e~i~~~~~g~~~~~~d~~~la~~i~~l~~-~~~~~~~~~~~a~~~~~~~ 356 (374)
T TIGR03088 296 ------------------GLPVIATAVGGNPELVQHGVTGALVPPGDAVALARALQPYVS-DPAARRAHGAAGRARAEQQ 356 (374)
T ss_pred ------------------CCCEEEcCCCCcHHHhcCCCceEEeCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHh
Confidence 45699999999888873 3899999999999999999987 4445556666777776 56
Q ss_pred CCHhHHHHHHHHHHHH
Q 002979 531 HDVAYWARSFAQDLER 546 (861)
Q Consensus 531 ~~~~~W~~~fl~~l~~ 546 (861)
+++...++++.+-..+
T Consensus 357 fs~~~~~~~~~~~y~~ 372 (374)
T TIGR03088 357 FSINAMVAAYAGLYDQ 372 (374)
T ss_pred CCHHHHHHHHHHHHHH
Confidence 8888888887765543
No 53
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.85 E-value=1.8e-20 Score=196.07 Aligned_cols=196 Identities=16% Similarity=0.130 Sum_probs=124.8
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-C-CceEecCcEEEEeCCc-ce
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-M-LGIAAEHGYFIRWNKT-SE 669 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~-lgliaenG~~i~~~~~-~~ 669 (861)
+|++|+||||++ +++.+++.++++|+++ +++|+.|+++|||+...+..++..+. . .++|++||+.|..... ..
T Consensus 1 ~i~~DlDGTLL~---~~~~~~~~~~~~l~~l-~~~gi~~~i~TgR~~~~~~~~~~~l~~~~~~~I~~NGa~i~~~~~~~~ 76 (221)
T TIGR02463 1 WVFSDLDGTLLD---SHSYDWQPAAPWLTRL-QEAGIPVILCTSKTAAEVEYLQKALGLTGDPYIAENGAAIHLEELWRE 76 (221)
T ss_pred CEEEeCCCCCcC---CCCCCcHHHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHcCCCCCcEEEeCCcEEEcCccccc
Confidence 589999999999 6665666699999999 79999999999999999999998764 2 4699999999986432 11
Q ss_pred E---EecCCccChHHHHHHHHHHHHHhhcCCC-ceEeec--------cceeEe------eeccCCccchhccHHHHHHHH
Q 002979 670 W---ETNHLGADLEWKKIVEPVMRSYTEATDG-SNIEIK--------ESALVW------HHQDADPDFGSCQAKELLDHL 731 (861)
Q Consensus 670 ~---~~~~~~~~~~w~~~v~~i~~~y~~~~~g-s~ie~k--------~~~l~~------~~~~~d~~~~~~~a~el~~~L 731 (861)
+ ... .....| +.+..+++...+...- ...... ...+.. ........+......+..+.+
T Consensus 77 ~~~~~~~--~~~~~~-~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (221)
T TIGR02463 77 EPGYPRI--ILGISY-GIIRLVLETLSEELHFKFTPFDDLSDAEIAELTGLSGSQAALAQDREASVPLLWRDSDSRMPRF 153 (221)
T ss_pred CCCceEE--ecCCCH-HHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCccEEecCchhHHHHH
Confidence 1 000 011111 2233333321111000 000000 000000 000000000000112333344
Q ss_pred HHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 732 ESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 732 ~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.+.+......+..+..++||.|++++||.|++++++++ |++++++++|||+.||++||+.+|.+
T Consensus 154 ~~~l~~~~~~~~~~~~~~ei~~~~~~Kg~al~~l~~~l---gi~~~~vi~~GD~~NDi~ml~~ag~~ 217 (221)
T TIGR02463 154 TALLADLGLAIVQGNRFSHVLGASSSKGKAANWLKATY---NQPDVKTLGLGDGPNDLPLLEVADYA 217 (221)
T ss_pred HHHHHHcCCeEEecCCeeEEecCCCCHHHHHHHHHHHh---CCCCCcEEEECCCHHHHHHHHhCCce
Confidence 44444334555556789999999999999999999999 99999999999999999999999974
No 54
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=99.85 E-value=1.3e-19 Score=205.02 Aligned_cols=286 Identities=20% Similarity=0.174 Sum_probs=200.2
Q ss_pred CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcC-----C-chH-HHHHHhhcCCEEeecChHhHHH
Q 002979 196 NPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTL-----P-VRD-EILRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 196 ~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~l-----p-~r~-~il~~ll~~dligF~t~~~~~~ 268 (861)
+| |+|.+|++....+...+.+. .+.++.+..|...+........ + .+. .-...+..+|.+.+.+......
T Consensus 101 ~~--Div~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~ 177 (398)
T cd03800 101 RP--DLIHAHYWDSGLVALLLARR-LGIPLVHTFHSLGAVKRRHLGAADTYEPARRIEAEERLLRAADRVIASTPQEAEE 177 (398)
T ss_pred Cc--cEEEEecCccchHHHHHHhh-cCCceEEEeecccccCCcccccccccchhhhhhHHHHHHhhCCEEEEcCHHHHHH
Confidence 55 99999988777666666544 4688999999765322111000 0 011 1123445789999888766665
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccC
Q 002979 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KG 348 (861)
+...- + ....++.++|+|+|.+.+..... ......++. ...++++|+++||+++.||
T Consensus 178 ~~~~~----~---------------~~~~~~~vi~ng~~~~~~~~~~~---~~~~~~~~~-~~~~~~~i~~~gr~~~~k~ 234 (398)
T cd03800 178 LYSLY----G---------------AYPRRIRVVPPGVDLERFTPYGR---AEARRARLL-RDPDKPRILAVGRLDPRKG 234 (398)
T ss_pred HHHHc----c---------------ccccccEEECCCCCccceecccc---hhhHHHhhc-cCCCCcEEEEEcccccccC
Confidence 54310 0 11123678999999887753211 111111111 1156789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+..+++|+..+.+++|+++ |+.+|....... .....+++.++++. +..+.+.+.+.++.+++..+|
T Consensus 235 ~~~ll~a~~~l~~~~~~~~----l~i~G~~~~~~~---~~~~~~~~~~~~~~-------~~~~~v~~~g~~~~~~~~~~~ 300 (398)
T cd03800 235 IDTLIRAYAELPELRERAN----LVIVGGPRDDIL---AMDEEELRELAREL-------GVIDRVDFPGRVSREDLPALY 300 (398)
T ss_pred HHHHHHHHHHHHHhCCCeE----EEEEECCCCcch---hhhhHHHHHHHHhc-------CCCceEEEeccCCHHHHHHHH
Confidence 9999999999988887765 888886542221 22223344444432 233566788899999999999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHH
Q 002979 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~a 505 (861)
+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+. .|++++|.|+++++++
T Consensus 301 ~~adi~l~ps~~e~~~~~l~Ea~a~-------------------G~Pvi~s~~~~~~e~i~~~~~g~~~~~~~~~~l~~~ 361 (398)
T cd03800 301 RAADVFVNPALYEPFGLTALEAMAC-------------------GLPVVATAVGGPRDIVVDGVTGLLVDPRDPEALAAA 361 (398)
T ss_pred HhCCEEEecccccccCcHHHHHHhc-------------------CCCEEECCCCCHHHHccCCCCeEEeCCCCHHHHHHH
Confidence 9999999999999999999999999 45699999999888882 4899999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHH
Q 002979 506 MTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl 541 (861)
|.++++. +++++.+.++.++++ ..+++..+++.++
T Consensus 362 i~~l~~~-~~~~~~~~~~a~~~~~~~~s~~~~~~~~~ 397 (398)
T cd03800 362 LRRLLTD-PALRRRLSRAGLRRARARYTWERVAARLL 397 (398)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 9999975 455555666667777 6788888888765
No 55
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=99.85 E-value=6.5e-20 Score=213.89 Aligned_cols=309 Identities=17% Similarity=0.201 Sum_probs=203.2
Q ss_pred HHHHHHHHHHHHHHHHH-cCCCCCEEEEeCcccccHHHHHHhhc-----CCCeEEEEEecCCCCh----HHHhcC--Cc-
Q 002979 178 QAYVSANKIFADKVMEV-INPDDDCVWVHDYHLMVLPTFLRKRF-----NRIKLGFFLHSPFPSS----EIYRTL--PV- 244 (861)
Q Consensus 178 ~~Y~~vN~~fa~~v~~~-~~p~~D~VwvhDyhl~llp~~lr~~~-----~~~~i~~flH~PfP~~----e~f~~l--p~- 244 (861)
..|...++...+.+.+. .+| |+|++||+|-.++|.++++++ .+.|+.|..|.+.+.. ..+..+ ++
T Consensus 110 ~~~~~f~~~~~~~l~~~~~~p--DviH~hd~~t~~~~~~l~~~~~~~~~~~~~~v~tiH~~~~~g~~~~~~~~~~~~~~~ 187 (476)
T cd03791 110 ERFALFSRAALELLRRLGWKP--DIIHCHDWHTGLVPALLKEKYADPFFKNIKTVFTIHNLAYQGVFPLEALEDLGLPWE 187 (476)
T ss_pred HHHHHHHHHHHHHHHhcCCCC--cEEEECchHHHHHHHHHHHhhccccCCCCCEEEEeCCCCCCCCCCHHHHHHcCCCcc
Confidence 44555555555544432 355 999999999999999998874 5789999999874321 111111 11
Q ss_pred -------------hHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEE--ecCeEEEEEEecccCCch
Q 002979 245 -------------RDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLD--YFGRTVYIKILPVGVHMG 309 (861)
Q Consensus 245 -------------r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~--~~gr~~~i~v~p~GId~~ 309 (861)
..-+..++..||.|-..+..|++..++.- .+. +++ ...+..++.++|+|||.+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~~~~~ad~v~~vS~~~~~~i~~~~-----------~~~-gl~~~~~~~~~ki~~I~NGid~~ 255 (476)
T cd03791 188 ELFHIDGLEFYGQVNFLKAGIVYADAVTTVSPTYAREILTPE-----------FGE-GLDGLLRARAGKLSGILNGIDYD 255 (476)
T ss_pred chhhhcccccCCcccHHHHHHHhcCcCeecCHhHHHHhCCCC-----------CCc-chHHHHHhccCCeEEEeCCCcCc
Confidence 01233345566766666666655443210 000 000 012235788899999998
Q ss_pred HHHHhhCCc-----------hhHHHHHHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEE
Q 002979 310 RLESVLNLP-----------ATATKIKEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLV 373 (861)
Q Consensus 310 ~~~~~~~~~-----------~~~~~~~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLv 373 (861)
.|.+..... ........+++++ .++++|+++||+.+.||+..+++|++++.++. +.|+
T Consensus 256 ~~~p~~~~~~~~~~~~~~~~~~~~~k~~l~~~~g~~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~------~~lv 329 (476)
T cd03791 256 VWNPATDPHLPANYSADDLEGKAENKAALQEELGLPVDPDAPLFGFVGRLTEQKGIDLLLEALPELLELG------GQLV 329 (476)
T ss_pred ccCccccchhhhcCCccccccHHHHHHHHHHHcCCCcCCCCCEEEEEeeccccccHHHHHHHHHHHHHcC------cEEE
Confidence 886432110 0112234466665 46789999999999999999999999987653 4488
Q ss_pred EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeee
Q 002979 374 QIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453 (861)
Q Consensus 374 qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac 453 (861)
.+|.. + .++++++.+++.+. ...++++.+ .+.++...+|+.||++++||..||+|++.+|||+|
T Consensus 330 i~G~g-----~--~~~~~~~~~~~~~~--------~~~v~~~~~-~~~~~~~~~~~~aDv~l~pS~~E~~gl~~lEAma~ 393 (476)
T cd03791 330 ILGSG-----D--PEYEEALRELAARY--------PGRVAVLIG-YDEALAHLIYAGADFFLMPSRFEPCGLTQMYAMRY 393 (476)
T ss_pred EEecC-----C--HHHHHHHHHHHHhC--------CCcEEEEEe-CCHHHHHHHHHhCCEEECCCCCCCCcHHHHHHhhC
Confidence 77742 1 23444555554432 113445554 45777789999999999999999999999999999
Q ss_pred ecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C--------CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHH
Q 002979 454 RQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--------GAIRVNPWDIDAVADAMTLAINMR--DSEKQLRHE 522 (861)
Q Consensus 454 ~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--------~ai~vnP~d~~~~A~ai~~aL~m~--~~e~~~r~~ 522 (861)
+.|+|+|..+|..+.+ + .|+++.|.|+++++++|.++++.. ++++....+
T Consensus 394 -------------------G~pvI~~~~gg~~e~v~~~~~~~~~~~G~~~~~~~~~~l~~~i~~~l~~~~~~~~~~~~~~ 454 (476)
T cd03791 394 -------------------GTVPIVRATGGLADTVIDYNEDTGEGTGFVFEGYNADALLAALRRALALYRDPEAWRKLQR 454 (476)
T ss_pred -------------------CCCCEECcCCCccceEeCCcCCCCCCCeEEeCCCCHHHHHHHHHHHHHHHcCHHHHHHHHH
Confidence 5568999999999888 2 589999999999999999998643 233333333
Q ss_pred HhhhhhccCCHhHHHHHHHHH
Q 002979 523 KHYRYVSTHDVAYWARSFAQD 543 (861)
Q Consensus 523 ~~~~~v~~~~~~~W~~~fl~~ 543 (861)
+... ..+++..-++++++-
T Consensus 455 ~~~~--~~fsw~~~a~~~~~~ 473 (476)
T cd03791 455 NAMA--QDFSWDRSAKEYLEL 473 (476)
T ss_pred HHhc--cCCChHHHHHHHHHH
Confidence 3322 346777777666553
No 56
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=99.85 E-value=1.6e-19 Score=201.20 Aligned_cols=281 Identities=17% Similarity=0.200 Sum_probs=196.2
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh-hcCCEEeecChHhHHH
Q 002979 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARH 268 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l-l~~dligF~t~~~~~~ 268 (861)
++++..+| |+|++|.+|..++..+++...+..++....|...+..-+ +..+.+.. .-++.+...+....+.
T Consensus 73 ~~~~~~~p--div~~~~~~~~~~~~l~~~~~~~~~~v~~~h~~~~~~~~------~~~~~~~~~~~~~~~~~~s~~~~~~ 144 (360)
T cd04951 73 KILRQFKP--DVVHAHMFHANIFARLLRLFLPSPPLICTAHSKNEGGRL------RMLAYRLTDFLSDLTTNVSKEALDY 144 (360)
T ss_pred HHHHhcCC--CEEEEcccchHHHHHHHHhhCCCCcEEEEeeccCchhHH------HHHHHHHHhhccCceEEEcHHHHHH
Confidence 44566677 899999999888888877766677888888854332111 11111111 1134444444444444
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccc
Q 002979 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI 345 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~ 345 (861)
|+... + -...++.++|+|+|...|... ......+++++ .++++++++||+.+
T Consensus 145 ~~~~~----~---------------~~~~~~~~i~ng~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~l~~g~~~~ 199 (360)
T cd04951 145 FIASK----A---------------FNANKSFVVYNGIDTDRFRKD------PARRLKIRNALGVKNDTFVILAVGRLVE 199 (360)
T ss_pred HHhcc----C---------------CCcccEEEEccccchhhcCcc------hHHHHHHHHHcCcCCCCEEEEEEeeCch
Confidence 44310 0 012356788999998876421 11223455554 46789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002979 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (861)
Q Consensus 346 ~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~ 425 (861)
.||+..+++|+.++.+++|+++ |+++|. ++...++++.+. +. +..+.+.+.+. .+++.
T Consensus 200 ~kg~~~li~a~~~l~~~~~~~~----l~i~G~-----g~~~~~~~~~~~----~~-------~~~~~v~~~g~--~~~~~ 257 (360)
T cd04951 200 AKDYPNLLKAFAKLLSDYLDIK----LLIAGD-----GPLRATLERLIK----AL-------GLSNRVKLLGL--RDDIA 257 (360)
T ss_pred hcCcHHHHHHHHHHHhhCCCeE----EEEEcC-----CCcHHHHHHHHH----hc-------CCCCcEEEecc--cccHH
Confidence 9999999999999999888766 888873 333334443333 22 23344556665 46899
Q ss_pred HHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHH
Q 002979 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVAD 504 (861)
Q Consensus 426 aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ 504 (861)
.+|+.||++++||..||||++++|||+| +.|+|+|+.+|..+.+ +.++.++|.|++++++
T Consensus 258 ~~~~~ad~~v~~s~~e~~~~~~~Ea~a~-------------------G~PvI~~~~~~~~e~i~~~g~~~~~~~~~~~~~ 318 (360)
T cd04951 258 AYYNAADLFVLSSAWEGFGLVVAEAMAC-------------------ELPVVATDAGGVREVVGDSGLIVPISDPEALAN 318 (360)
T ss_pred HHHHhhceEEecccccCCChHHHHHHHc-------------------CCCEEEecCCChhhEecCCceEeCCCCHHHHHH
Confidence 9999999999999999999999999999 4568999998888777 4589999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002979 505 AMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
+|.++++.++..+..+.++.......+++..+++.+++-+
T Consensus 319 ~i~~ll~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~y 358 (360)
T cd04951 319 KIDEILKMSGEERDIIGARRERIVKKFSINSIVQQWLTLY 358 (360)
T ss_pred HHHHHHhCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHh
Confidence 9999998777777666666333446689999888887643
No 57
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=99.84 E-value=2.2e-19 Score=203.16 Aligned_cols=285 Identities=13% Similarity=0.127 Sum_probs=197.9
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHH-----hcCCchHH-HHHHhhcCCEEeecChHhHHHHHHH
Q 002979 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIY-----RTLPVRDE-ILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f-----~~lp~r~~-il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
-|+|++|++...+.+.++ .+..+.++.+.+|..+|..... ..+..... ....+..+|.|-..+....+.+...
T Consensus 84 ~divh~~~~~~~~~~~~~-~~~~~~p~v~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~~~~~ 162 (388)
T TIGR02149 84 ADVVHSHTWYTFLAGHLA-KKLYDKPLVVTAHSLEPLRPWKEEQLGGGYKLSSWAEKTAIEAADRVIAVSGGMREDILKY 162 (388)
T ss_pred CCeEeecchhhhhHHHHH-HHhcCCCEEEEeecccccccccccccccchhHHHHHHHHHHhhCCEEEEccHHHHHHHHHH
Confidence 499999998776555544 4556788999999876532110 00001111 1233456788877777666655431
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi 349 (861)
. -++ ...++.++|+|+|...+... . ...+++++ .++++|+++||+.+.||+
T Consensus 163 ~---~~~---------------~~~~i~vi~ng~~~~~~~~~-----~---~~~~~~~~~~~~~~~~i~~~Grl~~~Kg~ 216 (388)
T TIGR02149 163 Y---PDL---------------DPEKVHVIYNGIDTKEYKPD-----D---GNVVLDRYGIDRSRPYILFVGRITRQKGV 216 (388)
T ss_pred c---CCC---------------CcceEEEecCCCChhhcCCC-----c---hHHHHHHhCCCCCceEEEEEcccccccCH
Confidence 0 011 12357789999998877421 1 12233443 467799999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002979 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
..+++|++++. ++++ |+.+|.. ++..++.+++.+.+...+.. ...++++.+.++.+++..+|+
T Consensus 217 ~~li~a~~~l~---~~~~----l~i~g~g-----~~~~~~~~~~~~~~~~~~~~-----~~~v~~~~~~~~~~~~~~~~~ 279 (388)
T TIGR02149 217 PHLLDAVHYIP---KDVQ----VVLCAGA-----PDTPEVAEEVRQAVALLDRN-----RTGIIWINKMLPKEELVELLS 279 (388)
T ss_pred HHHHHHHHHHh---hcCc----EEEEeCC-----CCcHHHHHHHHHHHHHhccc-----cCceEEecCCCCHHHHHHHHH
Confidence 99999999873 3433 6666532 22234445555554443221 124677888999999999999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCH------H
Q 002979 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDI------D 500 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~------~ 500 (861)
.||++|+||..||||++++|||+| +.|+|+|..+|..+.+. .|++++|.|. +
T Consensus 280 ~aDv~v~ps~~e~~g~~~lEA~a~-------------------G~PvI~s~~~~~~e~i~~~~~G~~~~~~~~~~~~~~~ 340 (388)
T TIGR02149 280 NAEVFVCPSIYEPLGIVNLEAMAC-------------------GTPVVASATGGIPEVVVDGETGFLVPPDNSDADGFQA 340 (388)
T ss_pred hCCEEEeCCccCCCChHHHHHHHc-------------------CCCEEEeCCCCHHHHhhCCCceEEcCCCCCcccchHH
Confidence 999999999999999999999999 55699999998888773 4899999999 9
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHHHHHHH
Q 002979 501 AVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQDLERA 547 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~~l~~~ 547 (861)
+++++|.++++ ++++++.+.++.++++ ..+++..+++++++.++++
T Consensus 341 ~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~~~~~y~~~ 387 (388)
T TIGR02149 341 ELAKAINILLA-DPELAKKMGIAGRKRAEEEFSWGSIAKKTVEMYRKV 387 (388)
T ss_pred HHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHhh
Confidence 99999999987 4555555566666665 5689999999988776653
No 58
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=99.84 E-value=1.4e-19 Score=207.51 Aligned_cols=273 Identities=16% Similarity=0.129 Sum_probs=181.5
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCch-------------H--HHH----------
Q 002979 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR-------------D--EIL---------- 249 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------------~--~il---------- 249 (861)
.+| |+ ||.+ +-+..+-.+.+.++++|+++++|-|.-+++.+..+-.+ . .++
T Consensus 106 ~~p--Dv-~i~~-~g~~~~~~~~~~~~~~~~i~y~h~P~~~~d~l~~~~~~~~~~~~~~~~~~~~~~~~~k~~y~~~~~~ 181 (419)
T cd03806 106 LVP--DI-FIDT-MGYPFTYPLVRLLGGCPVGAYVHYPTISTDMLQKVRSREASYNNSATIARSPVLSKAKLLYYRLFAF 181 (419)
T ss_pred cCC--CE-EEEc-CCcccHHHHHHHhcCCeEEEEecCCcchHHHHHHHhhccccccCccchhccchHHHHHHHHHHHHHH
Confidence 367 74 4543 33333344556677899999999443344544222111 1 111
Q ss_pred ---HHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHH
Q 002979 250 ---RGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKE 326 (861)
Q Consensus 250 ---~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~ 326 (861)
-.+-.||.|-..+....+++.+ .. +...++.++++|+|.+.|.... .
T Consensus 182 ~~~~~~~~aD~ii~~S~~~~~~~~~----~~----------------~~~~~~~vi~~gvd~~~~~~~~---~------- 231 (419)
T cd03806 182 LYGLAGSFADVVMVNSTWTRNHIRS----LW----------------KRNTKPSIVYPPCDVEELLKLP---L------- 231 (419)
T ss_pred HHHHHhhcCCEEEECCHHHHHHHHH----Hh----------------CcCCCcEEEcCCCCHHHhcccc---c-------
Confidence 1223567777666544444432 10 1112567789999988775221 0
Q ss_pred HHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 002979 327 IEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (861)
Q Consensus 327 l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~ 405 (861)
....++++|++++|+.+.||+...|+||.++.+.+|+.. .++.|+++|..... +..++.+++++++++.
T Consensus 232 --~~~~~~~~il~vgr~~~~K~~~~li~A~~~l~~~~~~~~~~~~~lvivG~~~~~---~~~~~~~~L~~~~~~l----- 301 (419)
T cd03806 232 --DEKTRENQILSIAQFRPEKNHPLQLRAFAKLLKRLPEEIKEKIKLVLIGSCRNE---DDEKRVEDLKLLAKEL----- 301 (419)
T ss_pred --ccccCCcEEEEEEeecCCCCHHHHHHHHHHHHHhCcccccCceEEEEEcCCCCc---ccHHHHHHHHHHHHHh-----
Confidence 012456799999999999999999999999999887631 24668888853211 1123445555555543
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc
Q 002979 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (861)
Q Consensus 406 ~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (861)
+....+.|.+.++.+++..+|+.||++|.||..||||++++||||| +.|+|+|..+|..
T Consensus 302 --~l~~~V~f~g~v~~~~l~~~l~~adv~v~~s~~E~Fgi~~lEAMa~-------------------G~pvIa~~~ggp~ 360 (419)
T cd03806 302 --GLEDKVEFVVNAPFEELLEELSTASIGLHTMWNEHFGIGVVEYMAA-------------------GLIPLAHASGGPL 360 (419)
T ss_pred --CCCCeEEEecCCCHHHHHHHHHhCeEEEECCccCCcccHHHHHHHc-------------------CCcEEEEcCCCCc
Confidence 3345677888999999999999999999999999999999999999 4568888887865
Q ss_pred ccC-C------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHh
Q 002979 486 PSL-S------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVA 534 (861)
Q Consensus 486 ~~l-~------~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~ 534 (861)
+++ . .|++++ |++++|++|.+++++++++++.+.+..++....++..
T Consensus 361 ~~iv~~~~~g~~G~l~~--d~~~la~ai~~ll~~~~~~~~~~~~~~~~~~~~fs~~ 414 (419)
T cd03806 361 LDIVVPWDGGPTGFLAS--TAEEYAEAIEKILSLSEEERLRIRRAARSSVKRFSDE 414 (419)
T ss_pred hheeeccCCCCceEEeC--CHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhhCHH
Confidence 433 3 378863 9999999999999998877765544444444445443
No 59
>PLN00142 sucrose synthase
Probab=99.84 E-value=2.8e-19 Score=212.69 Aligned_cols=331 Identities=13% Similarity=0.130 Sum_probs=199.2
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccc-cHHHHHHhhcCCCeEEEEEecC-----------CCChH-HHh
Q 002979 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLM-VLPTFLRKRFNRIKLGFFLHSP-----------FPSSE-IYR 240 (861)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~-llp~~lr~~~~~~~i~~flH~P-----------fP~~e-~f~ 240 (861)
.+.|..-.+++...++.+.......-|+|+-| |-+- ++...|++++ +++..+..|.- |...| -|+
T Consensus 384 e~l~p~L~~f~~~~~~~~~~~~~~~PDlIHaH-Ywdsg~vA~~La~~l-gVP~v~T~HsL~k~K~~~~~~~~~~~e~~y~ 461 (815)
T PLN00142 384 FDVWPYLETFAEDAASEILAELQGKPDLIIGN-YSDGNLVASLLAHKL-GVTQCTIAHALEKTKYPDSDIYWKKFDDKYH 461 (815)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEEC-CccHHHHHHHHHHHh-CCCEEEEcccchhhhccccCCcccccchhhh
Confidence 45788777777777777755443112899999 4444 5555555554 68899988932 21111 111
Q ss_pred cC-CchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCC---------eeeEEecCeEEEEEEecccCCchH
Q 002979 241 TL-PVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRG---------HIGLDYFGRTVYIKILPVGVHMGR 310 (861)
Q Consensus 241 ~l-p~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~---------~~~~~~~gr~~~i~v~p~GId~~~ 310 (861)
.. -...|.+ .|-.||.|--.|..-....-. ++ + .|.+-.+ ..+++++. -++.++|+|+|...
T Consensus 462 ~~~r~~aE~~-a~~~Ad~IIasT~qEi~g~~~---~i-~-qy~sh~~f~~p~L~rvv~GId~~~--~ki~VVppGvD~~~ 533 (815)
T PLN00142 462 FSCQFTADLI-AMNHADFIITSTYQEIAGSKD---TV-G-QYESHTAFTLPGLYRVVHGIDVFD--PKFNIVSPGADMSI 533 (815)
T ss_pred hhhchHHHHH-HHHhhhHHHhCcHHHHhcccc---hh-h-hhhcccccccchhhhhhccccccc--cCeeEECCCCChhh
Confidence 10 0111222 444556554333221110000 00 0 0111000 00111111 26788999999998
Q ss_pred HHHhhCCc--------hhHHHH---HHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002979 311 LESVLNLP--------ATATKI---KEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 311 ~~~~~~~~--------~~~~~~---~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
|.+..... ...... ...++.+ .++++|++|+|+++.||+..+++||.++.+..+++ .|++
T Consensus 534 F~P~~~~~~rl~~l~n~I~~~l~~~~~~~e~lg~l~~~~kpvIl~VGRL~~~KGid~LIeA~a~l~~l~~~~----~LVI 609 (815)
T PLN00142 534 YFPYTEKQKRLTSLHPSIEELLYSPEQNDEHIGYLKDRKKPIIFSMARLDRVKNLTGLVEWYGKNKRLRELV----NLVV 609 (815)
T ss_pred cCCCChHHhhHHhhcccchhhcCChHHHHHHhCCccCCCCcEEEEEecCcccCCHHHHHHHHHHHHHhCCCc----EEEE
Confidence 86321100 000000 0011111 35779999999999999999999999886666554 4888
Q ss_pred EecCCC-CChhHHH--HHHHHHHHHHHHHhhccCCCCcccEEEEcC----CCCHHHHHHHHH-hcccceecccccCCCCc
Q 002979 375 IVNPAR-GSGKDVQ--EAKKETYLTAKRINEVYGSPNYEPVVLIDR----PVPRFEKSAYYA-VAECCIVNAVRDGMNLV 446 (861)
Q Consensus 375 i~~p~r-~~~~~~~--~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~----~v~~~el~aly~-~ADv~vvtS~~EG~nLv 446 (861)
+|.+.. ....+.+ +..+++.+++++.+ ....+.+.+ ..+..+++.+|+ ++|+||+||.+||||++
T Consensus 610 VGgg~d~~~s~d~ee~~el~~L~~La~~lg-------L~~~V~flG~~~~~~~~~eLyr~iadaaDVfVlPS~~EgFGLv 682 (815)
T PLN00142 610 VGGFIDPSKSKDREEIAEIKKMHSLIEKYN-------LKGQFRWIAAQTNRVRNGELYRYIADTKGAFVQPALYEAFGLT 682 (815)
T ss_pred EECCccccccccHHHHHHHHHHHHHHHHcC-------CCCcEEEcCCcCCcccHHHHHHHHHhhCCEEEeCCcccCCCHH
Confidence 886411 1111111 12234445555432 122233433 455678888777 57999999999999999
Q ss_pred ceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHH
Q 002979 447 PYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAIN---MRDSEKQLR 520 (861)
Q Consensus 447 ~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~e~~~r 520 (861)
++||||| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.+++. .+++.++..
T Consensus 683 vLEAMA~-------------------GlPVVATdvGG~~EIV~dG~tG~LV~P~D~eaLA~aI~~lLekLl~Dp~lr~~m 743 (815)
T PLN00142 683 VVEAMTC-------------------GLPTFATCQGGPAEIIVDGVSGFHIDPYHGDEAANKIADFFEKCKEDPSYWNKI 743 (815)
T ss_pred HHHHHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHH
Confidence 9999999 56699999999998883 4899999999999999988763 356666666
Q ss_pred HHHhhhhh-ccCCHhHHHHHHHHHH
Q 002979 521 HEKHYRYV-STHDVAYWARSFAQDL 544 (861)
Q Consensus 521 ~~~~~~~v-~~~~~~~W~~~fl~~l 544 (861)
.++.++.+ +.+++...++++++-.
T Consensus 744 g~~Ar~rv~e~FSWe~~A~rll~L~ 768 (815)
T PLN00142 744 SDAGLQRIYECYTWKIYAERLLTLG 768 (815)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 66767776 5688888888877644
No 60
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=99.84 E-value=7.4e-19 Score=209.13 Aligned_cols=334 Identities=12% Similarity=0.129 Sum_probs=202.6
Q ss_pred hHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCC----CChHHH-hcCCchHH-
Q 002979 174 RVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEIY-RTLPVRDE- 247 (861)
Q Consensus 174 ~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~f-~~lp~r~~- 247 (861)
.+.|..-.+++...++.+.......-|+|+.|...=-++...|.++. .++..+..|..= +.+..+ ..+..+..
T Consensus 361 ~~l~p~l~~f~~~~~~~~~~~~~~~pDlIHahy~d~glva~lla~~l-gVP~v~t~HsL~~~K~~~~g~~~~~~e~~~~~ 439 (784)
T TIGR02470 361 FEIWPYLETFAEDAEKEILAELQGKPDLIIGNYSDGNLVASLLARKL-GVTQCTIAHALEKTKYPDSDIYWQEFEDKYHF 439 (784)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCEEEECCCchHHHHHHHHHhc-CCCEEEECCcchhhcccccccccccchhHHHh
Confidence 35677777777777776655443112899998544445666665554 588777778541 111110 00110100
Q ss_pred ------HHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccC-----CCeeeEEecC---eEEEEEEecccCCchHHHH
Q 002979 248 ------ILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESK-----RGHIGLDYFG---RTVYIKILPVGVHMGRLES 313 (861)
Q Consensus 248 ------il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~-----~~~~~~~~~g---r~~~i~v~p~GId~~~~~~ 313 (861)
=+..|-.||.|--.|+.-...-...+. .|.+. .+...+ .+| ..-++.++|+|+|+..|.+
T Consensus 440 ~~r~~ae~~~~~~AD~IItsT~qEi~~~~~~v~-----qY~s~~~ft~p~Ly~v-vnGid~~~~Ki~VVpPGVD~~iF~P 513 (784)
T TIGR02470 440 SCQFTADLIAMNAADFIITSTYQEIAGTKDSVG-----QYESHQAFTMPGLYRV-VHGIDVFDPKFNIVSPGADESIYFP 513 (784)
T ss_pred hhhhhHHHHHHhcCCEEEECcHHHhhhhhhhhh-----hhhhcccccccceeee-ecCccCCcCCeEEECCCcChhhcCC
Confidence 125566788887666432111000000 00000 011111 111 1237788999999998864
Q ss_pred hhCCchhHH-HH----------HHHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 002979 314 VLNLPATAT-KI----------KEIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN 377 (861)
Q Consensus 314 ~~~~~~~~~-~~----------~~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~ 377 (861)
......... .. ...++.+ .++++|++|+|+++.||+..+++||.++.+..+ .+.||+||.
T Consensus 514 ~~~~~~r~~~~~~~ie~ll~~~~~~~~~~G~l~d~~kpiIl~VGRL~~~KGid~LIeA~~~l~~l~~----~~~LVIVGG 589 (784)
T TIGR02470 514 YSDKEKRLTNLHPEIEELLFSLEDNDEHYGYLKDPNKPIIFSMARLDRVKNLTGLVECYGRSPKLRE----LVNLVVVAG 589 (784)
T ss_pred CCchhhhhhhhhcchhhhccchhhHHHHhCCCCCCCCcEEEEEeCCCccCCHHHHHHHHHHhHhhCC----CeEEEEEeC
Confidence 321110000 00 0112222 468899999999999999999999987644333 355888886
Q ss_pred CCCC---ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC-CCHHHHHHHHH----hcccceecccccCCCCccee
Q 002979 378 PARG---SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP-VPRFEKSAYYA----VAECCIVNAVRDGMNLVPYK 449 (861)
Q Consensus 378 p~r~---~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~-v~~~el~aly~----~ADv~vvtS~~EG~nLv~~E 449 (861)
+... ...+..+..+++.+++++. | ....+.+.+. .+..++..+|+ .+||||+||.+||||||++|
T Consensus 590 g~~~~~s~d~ee~~~i~~L~~la~~~----g---L~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLE 662 (784)
T TIGR02470 590 KLDAKESKDREEQAEIEKMHNLIDQY----Q---LHGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLE 662 (784)
T ss_pred CcccccccchhHHHHHHHHHHHHHHh----C---CCCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHH
Confidence 5321 1112222334555555543 2 2234455554 35566666665 24799999999999999999
Q ss_pred eeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhc---CCHHHHHHHHHH
Q 002979 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAIN---MRDSEKQLRHEK 523 (861)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~---m~~~e~~~r~~~ 523 (861)
|||| |.|+|+|..+|+.+.+. .|++|+|.|++++|++|.++++ ..++.++...++
T Consensus 663 AMAc-------------------GlPVVAT~~GG~~EiV~dg~tGfLVdp~D~eaLA~aL~~ll~kll~dp~~~~~ms~~ 723 (784)
T TIGR02470 663 AMTC-------------------GLPTFATRFGGPLEIIQDGVSGFHIDPYHGEEAAEKIVDFFEKCDEDPSYWQKISQG 723 (784)
T ss_pred HHHc-------------------CCCEEEcCCCCHHHHhcCCCcEEEeCCCCHHHHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 9999 56699999999999883 4899999999999999999874 245555666666
Q ss_pred hhhhh-ccCCHhHHHHHHHHHH
Q 002979 524 HYRYV-STHDVAYWARSFAQDL 544 (861)
Q Consensus 524 ~~~~v-~~~~~~~W~~~fl~~l 544 (861)
.++++ +.+++...+++++.-+
T Consensus 724 a~~rV~~~FSW~~~A~~ll~l~ 745 (784)
T TIGR02470 724 GLQRIYEKYTWKIYSERLLTLA 745 (784)
T ss_pred HHHHHHHhCCHHHHHHHHHHHH
Confidence 66666 5688888888877554
No 61
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.84 E-value=3e-19 Score=200.17 Aligned_cols=274 Identities=17% Similarity=0.105 Sum_probs=191.4
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCC----CChHHHhcCCchHHHHH-HhhcCCEEeecChHh
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPF----PSSEIYRTLPVRDEILR-GLLNCDLIGFHTFDY 265 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~Pf----P~~e~f~~lp~r~~il~-~ll~~dligF~t~~~ 265 (861)
+++..+| |+|++|+.+..+....+.+ ..++++.+.+|.-. +.............+.+ .+-.+|.|-+.+...
T Consensus 77 ~~~~~~~--dvvh~~~~~~~~~~~~~~~-~~~~p~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~ 153 (367)
T cd05844 77 LLRRHRP--DLVHAHFGFDGVYALPLAR-RLGVPLVVTFHGFDATTSLALLLRSRWALYARRRRRLARRAALFIAVSQFI 153 (367)
T ss_pred HHHhhCC--CEEEeccCchHHHHHHHHH-HcCCCEEEEEeCccccccchhhcccchhHHHHHHHHHHHhcCEEEECCHHH
Confidence 5566677 8999997764443333333 34678888888422 22111111111122222 234578888877655
Q ss_pred HHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCccc
Q 002979 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDI 345 (861)
Q Consensus 266 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~ 345 (861)
.+.+... |+ ...++.++|+|+|.+.+.... ...++++++++||+.+
T Consensus 154 ~~~~~~~-----~~---------------~~~~i~vi~~g~d~~~~~~~~--------------~~~~~~~i~~~G~~~~ 199 (367)
T cd05844 154 RDRLLAL-----GF---------------PPEKVHVHPIGVDTAKFTPAT--------------PARRPPRILFVGRFVE 199 (367)
T ss_pred HHHHHHc-----CC---------------CHHHeEEecCCCCHHhcCCCC--------------CCCCCcEEEEEEeecc
Confidence 5544431 11 123566789999988764210 0134678999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002979 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (861)
Q Consensus 346 ~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~ 425 (861)
.||+..+++|+..+.+++|+++ |+++|. ++..++ +.+++++ .+..+.+.+.+.++.+++.
T Consensus 200 ~K~~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~----~~~~~~~-------~~~~~~v~~~g~~~~~~l~ 259 (367)
T cd05844 200 KKGPLLLLEAFARLARRVPEVR----LVIIGD-----GPLLAA----LEALARA-------LGLGGRVTFLGAQPHAEVR 259 (367)
T ss_pred ccChHHHHHHHHHHHHhCCCeE----EEEEeC-----chHHHH----HHHHHHH-------cCCCCeEEECCCCCHHHHH
Confidence 9999999999999998888765 888873 333333 3333333 2334566788899999999
Q ss_pred HHHHhcccceeccc------ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCC
Q 002979 426 AYYAVAECCIVNAV------RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNP 496 (861)
Q Consensus 426 aly~~ADv~vvtS~------~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP 496 (861)
.+|+.||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+ ..|++++|
T Consensus 260 ~~~~~ad~~v~ps~~~~~~~~E~~~~~~~EA~a~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~ 320 (367)
T cd05844 260 ELMRRARIFLQPSVTAPSGDAEGLPVVLLEAQAS-------------------GVPVVATRHGGIPEAVEDGETGLLVPE 320 (367)
T ss_pred HHHHhCCEEEECcccCCCCCccCCchHHHHHHHc-------------------CCCEEEeCCCCchhheecCCeeEEECC
Confidence 99999999999997 59999999999999 5569999999988877 34899999
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHH
Q 002979 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (861)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl 541 (861)
.|+++++++|.++++ +++.+.....+.++++ ..+++..+++.+.
T Consensus 321 ~d~~~l~~~i~~l~~-~~~~~~~~~~~a~~~~~~~~s~~~~~~~l~ 365 (367)
T cd05844 321 GDVAALAAALGRLLA-DPDLRARMGAAGRRRVEERFDLRRQTAKLE 365 (367)
T ss_pred CCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHHHHCCHHHHHHHHh
Confidence 999999999999987 3445555566677776 4588888887764
No 62
>PLN02382 probable sucrose-phosphatase
Probab=99.83 E-value=1.5e-19 Score=204.71 Aligned_cols=225 Identities=17% Similarity=0.236 Sum_probs=149.0
Q ss_pred hccceEEEecCCccccCCCCCCCCCCHHHHHHH-HHhhcCCCCeEEEECCCChhhHHHHhcccc-CCc--eEecCcEEEE
Q 002979 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVL-KTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLG--IAAEHGYFIR 663 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L-~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lg--liaenG~~i~ 663 (861)
.+.+.+|++||||||++.. .++.++.....++ +++ .++|+.++++|||++..+.++.+.++ ..+ +|+.||+.|.
T Consensus 6 ~~~~~lI~sDLDGTLL~~~-~~~~~s~~~~~~l~~~~-~~~gi~fv~aTGR~~~~~~~l~~~~~l~~p~~~I~~nGt~I~ 83 (413)
T PLN02382 6 GSPRLMIVSDLDHTMVDHH-DPENLSLLRFNALWEAE-YRHDSLLVFSTGRSPTLYKELRKEKPLLTPDITIMSVGTEIA 83 (413)
T ss_pred CCCCEEEEEcCCCcCcCCC-CccchhHHHHHHHHHHh-hcCCeeEEEEcCCCHHHHHHHHHhCCCCCCCEEEEcCCcEEE
Confidence 4456799999999999821 1446776666666 877 79999999999999888888766543 122 6788999998
Q ss_pred eCCcceEEecCCccChHHHHHHHH------HHHHHhhcCCC----ceEeeccceeEeeeccCCccchhccHHHHHHHHHH
Q 002979 664 WNKTSEWETNHLGADLEWKKIVEP------VMRSYTEATDG----SNIEIKESALVWHHQDADPDFGSCQAKELLDHLES 733 (861)
Q Consensus 664 ~~~~~~~~~~~~~~~~~w~~~v~~------i~~~y~~~~~g----s~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~ 733 (861)
..+... .+..|...... +.+. ....+. ...+.+...+.+...+. ...++.+.+.+
T Consensus 84 ~~~~~~-------~d~~w~~~l~~~w~~~~v~~~-~~~~~~l~~q~~~~~~~~Ki~~~~~~~-------~~~~~~~~l~~ 148 (413)
T PLN02382 84 YGESMV-------PDHGWVEYLNKKWDREIVVEE-TSKFPELKLQPETEQRPHKVSFYVDKK-------KAQEVIKELSE 148 (413)
T ss_pred eCCCCc-------cChhHHHHHhccCChhhHHHH-HhcCCCcccCCcccCCCeEEEEEechH-------HhHHHHHHHHH
Confidence 754211 12334333221 1111 112221 11222223333333211 12334455555
Q ss_pred HhcCC---CEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCce
Q 002979 734 VLANE---PAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI 810 (861)
Q Consensus 734 ~l~~~---~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~ 810 (861)
.+... ...+.++..++||.|+++|||.|+++|++++...|++++++++|||+.||++||+.++.
T Consensus 149 ~~~~~g~~~~i~~s~~~~ldI~p~g~sKg~Al~~L~~~~~~~gi~~~~~iafGDs~NDleMl~~ag~------------- 215 (413)
T PLN02382 149 RLEKRGLDVKIIYSGGIDLDVLPQGAGKGQALAYLLKKLKAEGKAPVNTLVCGDSGNDAELFSVPDV------------- 215 (413)
T ss_pred HHHhcCCcEEEEEECCcEEEEEeCCCCHHHHHHHHHHHhhhcCCChhcEEEEeCCHHHHHHHhcCCC-------------
Confidence 55332 23456788999999999999999999999985557899999999999999999999983
Q ss_pred EEEEeCCCCc------------ccceec---CCHhHHHHHHHHHHhh
Q 002979 811 FACTVGRKPS------------KAKYYL---DDATDVLKLLQGLATA 842 (861)
Q Consensus 811 ~av~vG~~~s------------~Aky~l---~d~~eV~~~L~~L~~~ 842 (861)
++|+|||+.. .|++++ .+.+++.+.|+.+.-.
T Consensus 216 ~gvam~NA~~elk~~a~~~~~~~~~~~~a~~~~~~GI~~al~~f~l~ 262 (413)
T PLN02382 216 YGVMVSNAQEELLQWYAENAKDNPKIIHATERCAAGIIQAIGHFNLG 262 (413)
T ss_pred CEEEEcCCcHHHHHHHHhhccCCCcEEEcCCCCccHHHHHHHHhCCC
Confidence 2788898741 224443 2478899999988743
No 63
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.83 E-value=2e-19 Score=209.58 Aligned_cols=300 Identities=14% Similarity=0.128 Sum_probs=199.7
Q ss_pred ccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh---HHHhc---CCc
Q 002979 171 RFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS---EIYRT---LPV 244 (861)
Q Consensus 171 ~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~---e~f~~---lp~ 244 (861)
.|.+-.|....-..-.|. .+...+ |+-|+|++|......++..+..+..+.|+.+..|--+|.. +++.. .+.
T Consensus 148 ~~~~~~~~~~~~~~~l~~-~l~~~~-~~~dviH~~s~~~~g~~~~~~~~~~~~p~I~t~Hg~~~~e~~~~~~~~~~~~~~ 225 (475)
T cd03813 148 SFVDYFWTVRNMLSPLLA-AIARPL-PKADVYHAVSTGYAGLLGALAKARRGTPFLLTEHGIYTRERKIELLQADWEMSY 225 (475)
T ss_pred CHHHHHHHHHHHHHHHHH-HhccCC-CCCCEEeccCcchHHHHHHHHHHHhCCCEEEecCCccHHHHHHHHHhcccchHH
Confidence 344445543332333332 233333 3459999998777767777666666899999999655421 22211 000
Q ss_pred -hH-------HHHH-HhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhh
Q 002979 245 -RD-------EILR-GLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVL 315 (861)
Q Consensus 245 -r~-------~il~-~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~ 315 (861)
+. .+.+ .+-.||.|-..+.... ..+. .++....++.++|+|||.+.|....
T Consensus 226 ~~~~~~~~~~~l~~~~~~~ad~Ii~~s~~~~-~~~~-------------------~~g~~~~ki~vIpNgid~~~f~~~~ 285 (475)
T cd03813 226 FRRLWIRFFESLGRLAYQAADRITTLYEGNR-ERQI-------------------EDGADPEKIRVIPNGIDPERFAPAR 285 (475)
T ss_pred HHHHHHHHHHHHHHHHHHhCCEEEecCHHHH-HHHH-------------------HcCCCHHHeEEeCCCcCHHHcCCcc
Confidence 00 0111 1124555544433222 1111 1112233677899999998885321
Q ss_pred CCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHH
Q 002979 316 NLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYL 395 (861)
Q Consensus 316 ~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~ 395 (861)
. . ....++++|+++||+.+.||+..+++|+..+.++.|+++ |+.+|... +..++.+++++
T Consensus 286 ~-----~------~~~~~~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~p~~~----l~IvG~g~-----~~~~~~~e~~~ 345 (475)
T cd03813 286 R-----A------RPEKEPPVVGLIGRVVPIKDIKTFIRAAAIVRKKIPDAE----GWVIGPTD-----EDPEYAEECRE 345 (475)
T ss_pred c-----c------ccCCCCcEEEEEeccccccCHHHHHHHHHHHHHhCCCeE----EEEECCCC-----cChHHHHHHHH
Confidence 1 0 112567899999999999999999999999999888866 88787432 22345566666
Q ss_pred HHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCce
Q 002979 396 TAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSM 475 (861)
Q Consensus 396 l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~ 475 (861)
++++.+ ..+.+.|.| ..++..+|+.||++|+||..|||+++++||||| +.|
T Consensus 346 li~~l~-------l~~~V~f~G---~~~v~~~l~~aDv~vlpS~~Eg~p~~vlEAma~-------------------G~P 396 (475)
T cd03813 346 LVESLG-------LEDNVKFTG---FQNVKEYLPKLDVLVLTSISEGQPLVILEAMAA-------------------GIP 396 (475)
T ss_pred HHHHhC-------CCCeEEEcC---CccHHHHHHhCCEEEeCchhhcCChHHHHHHHc-------------------CCC
Confidence 666543 234566666 678999999999999999999999999999999 456
Q ss_pred EEeccCCCCcccCC---------CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHH
Q 002979 476 LVVSEFIGCSPSLS---------GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQ 542 (861)
Q Consensus 476 lV~Se~~G~~~~l~---------~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~ 542 (861)
+|+|..+|+.+.+. .|++++|.|++++|++|.++++ +++.+....++.++++.+ ++....++++.+
T Consensus 397 VVatd~g~~~elv~~~~~~~~g~~G~lv~~~d~~~la~ai~~ll~-~~~~~~~~~~~a~~~v~~~~s~~~~~~~y~~ 472 (475)
T cd03813 397 VVATDVGSCRELIEGADDEALGPAGEVVPPADPEALARAILRLLK-DPELRRAMGEAGRKRVERYYTLERMIDSYRR 472 (475)
T ss_pred EEECCCCChHHHhcCCcccccCCceEEECCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 89999999888773 4799999999999999999998 455566666677777766 466666666554
No 64
>PLN02423 phosphomannomutase
Probab=99.83 E-value=4.2e-19 Score=188.24 Aligned_cols=211 Identities=20% Similarity=0.189 Sum_probs=137.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc-c-C-CceEecCcEEEEeCC
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC-E-M-LGIAAEHGYFIRWNK 666 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~-~-~-lgliaenG~~i~~~~ 666 (861)
+++++++|+||||++ .++.+++++.++|++| ++. +.|+++|||+...+.+.+... . . ..++++||+.+...+
T Consensus 6 ~~~i~~~D~DGTLl~---~~~~i~~~~~~ai~~l-~~~-i~fviaTGR~~~~~~~~~~~~~~~~~~~~I~~NGa~i~~~g 80 (245)
T PLN02423 6 PGVIALFDVDGTLTA---PRKEATPEMLEFMKEL-RKV-VTVGVVGGSDLSKISEQLGKTVINDYDYVFSENGLVAHKDG 80 (245)
T ss_pred cceEEEEeccCCCcC---CCCcCCHHHHHHHHHH-HhC-CEEEEECCcCHHHHHHHhcccccccCCEEEECCceEEEeCC
Confidence 345667999999999 7888999999999999 555 999999999999998888653 1 1 368899999999766
Q ss_pred cceEEecCCc-cChHHHHHHHHHHHHHhh--------cCCCceEeeccceeEee--eccCCc-------cc--hhccHHH
Q 002979 667 TSEWETNHLG-ADLEWKKIVEPVMRSYTE--------ATDGSNIEIKESALVWH--HQDADP-------DF--GSCQAKE 726 (861)
Q Consensus 667 ~~~~~~~~~~-~~~~w~~~v~~i~~~y~~--------~~~gs~ie~k~~~l~~~--~~~~d~-------~~--~~~~a~e 726 (861)
..++....+. .+. +.+..+++.... ...+.+++..+...... +.+... .+ ......+
T Consensus 81 ~~i~~~~l~~~l~~---~~~~~ii~~~~~~~~~~~i~~~~~~~ie~~~~i~~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 157 (245)
T PLN02423 81 KLIGTQSLKSFLGE---DKLKEFINFTLHYIADLDIPIKRGTFIEFRSGMLNVSPIGRNCSQEERDEFEKYDKVHNIRPK 157 (245)
T ss_pred EEEEEecccccCCH---HHHHHHHHHHHHHHHHcCCccccCCeEEccCCccccCcccccCCHhHHhhHHhhCccchHHHH
Confidence 5555433221 111 122222221111 11244554333222111 111100 00 0111234
Q ss_pred HHHHHHHHhcCCC-EEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccccCCC
Q 002979 727 LLDHLESVLANEP-AVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILSTVSG 801 (861)
Q Consensus 727 l~~~L~~~l~~~~-~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~ 801 (861)
+.+.+.+.+.+.. ..+.+|..++||+|+|+|||.|++.|+ ++++++|||| +.||++|++.-|.
T Consensus 158 ~~~~l~~~~~~~~~~~s~~g~~~iDi~~~gvnKg~al~~L~--------~~~e~~aFGD~~~~~~ND~eMl~~~~~---- 225 (245)
T PLN02423 158 MVSVLREKFAHLNLTYSIGGQISFDVFPQGWDKTYCLQFLE--------DFDEIHFFGDKTYEGGNDHEIFESERT---- 225 (245)
T ss_pred HHHHHHHhCCCCcEEEecCCcEEEEEeeCCCCHHHHHHHhc--------CcCeEEEEeccCCCCCCcHHHHhCCCc----
Confidence 4455555554422 334455689999999999999999997 5899999999 8999999998664
Q ss_pred CCCCCCCceEEEEeCCCCcccceecCCHhHHHHHHHHHH
Q 002979 802 PSLPVPPEIFACTVGRKPSKAKYYLDDATDVLKLLQGLA 840 (861)
Q Consensus 802 ~~~~~~~~~~av~vG~~~s~Aky~l~d~~eV~~~L~~L~ 840 (861)
.+.+ +.++++..++|+++.
T Consensus 226 ---------~~~~-----------~~~~~~~~~~~~~~~ 244 (245)
T PLN02423 226 ---------IGHT-----------VTSPDDTREQCTALF 244 (245)
T ss_pred ---------ceEE-----------eCCHHHHHHHHHHhc
Confidence 2444 457888888888763
No 65
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=99.83 E-value=4.2e-19 Score=197.91 Aligned_cols=266 Identities=12% Similarity=0.051 Sum_probs=181.1
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHH-HHhhcCCEEeecChHhHHHH
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-RGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il-~~ll~~dligF~t~~~~~~F 269 (861)
+++..+| |+|++|..+...++.++.++.....+.+..|..+...+.+........+. ..+..+|.+-..+....+.+
T Consensus 75 ~~~~~~~--Dvv~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~ 152 (358)
T cd03812 75 LIKKNKY--DIVHVHGSSASGFILLAAKKAGVKVRIAHSHNTSDSHDKKKKILKYKVLRKLINRLATDYLACSEEAGKWL 152 (358)
T ss_pred HHhcCCC--CEEEEeCcchhHHHHHHHhhCCCCeEEEEeccccccccccchhhHHHHHHHHHHhcCCEEEEcCHHHHHHH
Confidence 4445566 89999999877777777666655566778887765544332221110111 11234566655555444333
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CCCeEEEeecCccccc
Q 002979 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKLILGIDDMDIFK 347 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~vil~Vdrld~~K 347 (861)
... ....++.++|+|+|...+... +.... ..++.. .++.+|+++||+++.|
T Consensus 153 ~~~---------------------~~~~~~~vi~ngvd~~~~~~~---~~~~~---~~~~~~~~~~~~~i~~vGr~~~~K 205 (358)
T cd03812 153 FGK---------------------VKNKKFKVIPNGIDLEKFIFN---EEIRK---KRRELGILEDKFVIGHVGRFSEQK 205 (358)
T ss_pred HhC---------------------CCcccEEEEeccCcHHHcCCC---chhhh---HHHHcCCCCCCEEEEEEecccccc
Confidence 220 112356789999999877422 11111 111211 5688999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002979 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (861)
Q Consensus 348 Gi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~al 427 (861)
|+..+++|+..+.+++|+++ |+.+|. ++..+.+++.+. + .+..+.+.+.+. .+++..+
T Consensus 206 g~~~li~a~~~l~~~~~~~~----l~ivG~-----g~~~~~~~~~~~----~-------~~~~~~v~~~g~--~~~~~~~ 263 (358)
T cd03812 206 NHEFLIEIFAELLKKNPNAK----LLLVGD-----GELEEEIKKKVK----E-------LGLEDKVIFLGV--RNDVPEL 263 (358)
T ss_pred ChHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHHHHHHH----h-------cCCCCcEEEecc--cCCHHHH
Confidence 99999999999999998866 888873 344344444333 2 233345566665 6789999
Q ss_pred HHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC--CceEeCCCCHHHHHHH
Q 002979 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADA 505 (861)
Q Consensus 428 y~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~a 505 (861)
|+.||++|+||..||||++++|||+| |.|+|+|+.+|..+.+. ++++..+.+++++|++
T Consensus 264 ~~~adi~v~ps~~E~~~~~~lEAma~-------------------G~PvI~s~~~~~~~~i~~~~~~~~~~~~~~~~a~~ 324 (358)
T cd03812 264 LQAMDVFLFPSLYEGLPLVLIEAQAS-------------------GLPCILSDTITKEVDLTDLVKFLSLDESPEIWAEE 324 (358)
T ss_pred HHhcCEEEecccccCCCHHHHHHHHh-------------------CCCEEEEcCCchhhhhccCccEEeCCCCHHHHHHH
Confidence 99999999999999999999999999 56699999999888884 3555666678999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhh
Q 002979 506 MTLAINMRDSEKQLRHEKHYR 526 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~ 526 (861)
|.++++.++..+..+..+..+
T Consensus 325 i~~l~~~~~~~~~~~~~~~~~ 345 (358)
T cd03812 325 ILKLKSEDRRERSSESIKKKG 345 (358)
T ss_pred HHHHHhCcchhhhhhhhhhcc
Confidence 999999887666554444333
No 66
>PLN02949 transferase, transferring glycosyl groups
Probab=99.83 E-value=1.2e-18 Score=200.85 Aligned_cols=314 Identities=13% Similarity=0.139 Sum_probs=206.7
Q ss_pred ccccccccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCccc-ccHHHHHHhhcCCCeEEE
Q 002979 149 FCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHL-MVLPTFLRKRFNRIKLGF 227 (861)
Q Consensus 149 f~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl-~llp~~lr~~~~~~~i~~ 227 (861)
+-..-.||-||.+. ..-...|-++..+.+ +.| .|||----. ..+| ++| +...||++
T Consensus 109 ~~~~~~~~~~t~~~--------~~~~~~~l~~~~~~~---------~~p---~v~vDt~~~~~~~p-l~~--~~~~~v~~ 165 (463)
T PLN02949 109 WIEEETYPRFTMIG--------QSLGSVYLAWEALCK---------FTP---LYFFDTSGYAFTYP-LAR--LFGCKVVC 165 (463)
T ss_pred ccccccCCceehHH--------HHHHHHHHHHHHHHh---------cCC---CEEEeCCCcccHHH-HHH--hcCCcEEE
Confidence 33556788887653 223567777776654 133 478741111 1223 344 44789999
Q ss_pred EEecCCCChHHHhcCCch-------------------HH----H---HH--HhhcCCEEeecChHhHHHHHHHHHHHhCC
Q 002979 228 FLHSPFPSSEIYRTLPVR-------------------DE----I---LR--GLLNCDLIGFHTFDYARHFLSCCSRMLGL 279 (861)
Q Consensus 228 flH~PfP~~e~f~~lp~r-------------------~~----i---l~--~ll~~dligF~t~~~~~~Fl~~~~r~lg~ 279 (861)
++|-|-=+.+....+-.+ +. + +. ..-.+|.|-..+....+++.+ ..
T Consensus 166 yvH~p~~~~dm~~~v~~~~~~~~~~~~~a~~~~~~~~k~~Y~~~~~~l~~~~~~~ad~ii~nS~~t~~~l~~----~~-- 239 (463)
T PLN02949 166 YTHYPTISSDMISRVRDRSSMYNNDASIARSFWLSTCKILYYRAFAWMYGLVGRCAHLAMVNSSWTKSHIEA----LW-- 239 (463)
T ss_pred EEeCCcchHHHHHHHhhcccccCccchhhccchhHHHHHHHHHHHHHHHHHHcCCCCEEEECCHHHHHHHHH----Hc--
Confidence 999665455433322100 00 0 11 113467776665544444432 11
Q ss_pred ccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHH
Q 002979 280 DYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQL 359 (861)
Q Consensus 280 ~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~l 359 (861)
+...++.++++|+|.+.+... +. +...+++++++|+|+.+.||+...|+||.++
T Consensus 240 --------------~~~~~i~vvyp~vd~~~~~~~---~~---------~~~~~~~~il~vGR~~~~Kg~~llI~A~~~l 293 (463)
T PLN02949 240 --------------RIPERIKRVYPPCDTSGLQAL---PL---------ERSEDPPYIISVAQFRPEKAHALQLEAFALA 293 (463)
T ss_pred --------------CCCCCeEEEcCCCCHHHcccC---Cc---------cccCCCCEEEEEEeeeccCCHHHHHHHHHHH
Confidence 111245678889998766311 10 0113467899999999999999999999999
Q ss_pred HHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceeccc
Q 002979 360 LQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV 439 (861)
Q Consensus 360 l~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~ 439 (861)
+++.++-..++.|+++|... .++..++.+++++++++. +....+.|.+.++.+++.++|+.||++|.||.
T Consensus 294 ~~~~~~~~~~~~LvIvG~~~---~~~~~~~~~eL~~la~~l-------~L~~~V~f~g~v~~~el~~ll~~a~~~v~~s~ 363 (463)
T PLN02949 294 LEKLDADVPRPKLQFVGSCR---NKEDEERLQKLKDRAKEL-------GLDGDVEFHKNVSYRDLVRLLGGAVAGLHSMI 363 (463)
T ss_pred HHhccccCCCcEEEEEeCCC---CcccHHHHHHHHHHHHHc-------CCCCcEEEeCCCCHHHHHHHHHhCcEEEeCCc
Confidence 87543211234599888542 112223344555555442 33345677889999999999999999999999
Q ss_pred ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C------CceEeCCCCHHHHHHHHHHHhcC
Q 002979 440 RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S------GAIRVNPWDIDAVADAMTLAINM 512 (861)
Q Consensus 440 ~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~------~ai~vnP~d~~~~A~ai~~aL~m 512 (861)
.||||++++||||| +.|+|++..+|..+++ . .|++++ |++++|++|.+++++
T Consensus 364 ~E~FGivvlEAMA~-------------------G~PVIa~~~gGp~~eIV~~~~~g~tG~l~~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 364 DEHFGISVVEYMAA-------------------GAVPIAHNSAGPKMDIVLDEDGQQTGFLAT--TVEEYADAILEVLRM 422 (463)
T ss_pred cCCCChHHHHHHHc-------------------CCcEEEeCCCCCcceeeecCCCCcccccCC--CHHHHHHHHHHHHhC
Confidence 99999999999999 4568999988875433 2 266764 999999999999998
Q ss_pred CHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHH
Q 002979 513 RDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERAC 548 (861)
Q Consensus 513 ~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~ 548 (861)
++++++...++.++.+.+++....++++.+.+....
T Consensus 423 ~~~~r~~m~~~ar~~~~~FS~e~~~~~~~~~i~~l~ 458 (463)
T PLN02949 423 RETERLEIAAAARKRANRFSEQRFNEDFKDAIRPIL 458 (463)
T ss_pred CHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 888887777788888888999988888887776543
No 67
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.82 E-value=1.5e-18 Score=194.73 Aligned_cols=286 Identities=13% Similarity=0.139 Sum_probs=194.4
Q ss_pred HHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcC---CCeEEEEEecCCCChHHHhcCCc-hHHHHHHhhcCCEEe
Q 002979 184 NKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFN---RIKLGFFLHSPFPSSEIYRTLPV-RDEILRGLLNCDLIG 259 (861)
Q Consensus 184 N~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~---~~~i~~flH~PfP~~e~f~~lp~-r~~il~~ll~~dlig 259 (861)
++.+.+.+ +..+| |+|++|.+.-..++.++..+.. +.++.+.+|-.-.. ....-+. +.-+...+-.+|.|.
T Consensus 73 ~~~l~~~i-~~~~~--divh~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~--~~~~~~~~~~~~~~~~~~~d~ii 147 (371)
T cd04962 73 ASKIAEVA-KRYKL--DLLHVHYAVPHAVAAYLAREILGKKDLPVVTTLHGTDIT--LVGQDPSFQPATRFSIEKSDGVT 147 (371)
T ss_pred HHHHHHHH-hcCCc--cEEeecccCCccHHHHHHHHhcCcCCCcEEEEEcCCccc--cccccccchHHHHHHHhhCCEEE
Confidence 34444444 55577 8999998766556666554332 57888888843110 1111111 222334456789998
Q ss_pred ecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeE
Q 002979 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKL 336 (861)
Q Consensus 260 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~v 336 (861)
..+....+.+...+ +...++.++|+|+|...+... .. ...++++ .++++
T Consensus 148 ~~s~~~~~~~~~~~--------------------~~~~~i~vi~n~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~ 199 (371)
T cd04962 148 AVSESLRQETYELF--------------------DITKEIEVIPNFVDEDRFRPK-----PD---EALKRRLGAPEGEKV 199 (371)
T ss_pred EcCHHHHHHHHHhc--------------------CCcCCEEEecCCcCHhhcCCC-----ch---HHHHHhcCCCCCCeE
Confidence 88887666554311 111246788999998766421 11 1223333 56889
Q ss_pred EEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEc
Q 002979 337 ILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID 416 (861)
Q Consensus 337 il~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~ 416 (861)
+++++|+.+.||+..+++|++++.++ ++++ |+.+|. +++..++++.+. + .+..+.+.+.
T Consensus 200 il~~g~l~~~K~~~~li~a~~~l~~~-~~~~----l~i~G~-----g~~~~~~~~~~~----~-------~~~~~~v~~~ 258 (371)
T cd04962 200 LIHISNFRPVKRIDDVIRIFAKVRKE-VPAR----LLLVGD-----GPERSPAERLAR----E-------LGLQDDVLFL 258 (371)
T ss_pred EEEecccccccCHHHHHHHHHHHHhc-CCce----EEEEcC-----CcCHHHHHHHHH----H-------cCCCceEEEe
Confidence 99999999999999999999988655 3344 777773 333334443332 2 1223445566
Q ss_pred CCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceE
Q 002979 417 RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIR 493 (861)
Q Consensus 417 ~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~ 493 (861)
+.. +++..+|+.||++|+||..||||++++|||+| +.|+|+|+.+|..+.+. .|++
T Consensus 259 g~~--~~~~~~~~~~d~~v~ps~~E~~~~~~~EAma~-------------------g~PvI~s~~~~~~e~i~~~~~G~~ 317 (371)
T cd04962 259 GKQ--DHVEELLSIADLFLLPSEKESFGLAALEAMAC-------------------GVPVVASNAGGIPEVVKHGETGFL 317 (371)
T ss_pred cCc--ccHHHHHHhcCEEEeCCCcCCCccHHHHHHHc-------------------CCCEEEeCCCCchhhhcCCCceEE
Confidence 653 57999999999999999999999999999999 45699999999888773 4799
Q ss_pred eCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHHHHHH
Q 002979 494 VNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 494 vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl~~l~ 545 (861)
++|.|++++|++|.++++ .++++....++.+++ ...+++...++.+++-++
T Consensus 318 ~~~~~~~~l~~~i~~l~~-~~~~~~~~~~~~~~~~~~~fs~~~~~~~~~~~y~ 369 (371)
T cd04962 318 VDVGDVEAMAEYALSLLE-DDELWQEFSRAARNRAAERFDSERIVPQYEALYR 369 (371)
T ss_pred cCCCCHHHHHHHHHHHHh-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 999999999999999997 444555556666666 456888888888776554
No 68
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=99.82 E-value=5.8e-19 Score=196.57 Aligned_cols=269 Identities=16% Similarity=0.175 Sum_probs=190.1
Q ss_pred HHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHH
Q 002979 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~ 271 (861)
++..+| |+|++|..+...+..++.+ ..++++.+.+|-.++.... ...+ +..+|.+-+.+....+.+.
T Consensus 74 ~~~~~~--dii~~~~~~~~~~~~~~~~-~~~~~~i~~~h~~~~~~~~------~~~~---~~~~~~vi~~s~~~~~~~~- 140 (355)
T cd03819 74 IREEKV--DIVHARSRAPAWSAYLAAR-RTRPPFVTTVHGFYSVNFR------YNAI---MARGDRVIAVSNFIADHIR- 140 (355)
T ss_pred HHHcCC--CEEEECCCchhHHHHHHHH-hcCCCEEEEeCCchhhHHH------HHHH---HHhcCEEEEeCHHHHHHHH-
Confidence 345566 8999998776555444443 4478999999977654431 1222 3468888777654444433
Q ss_pred HHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccC
Q 002979 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKG 348 (861)
Q Consensus 272 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KG 348 (861)
...++ ...++.++|+|+|...|...... ......+++++ .++++++++||+...||
T Consensus 141 ---~~~~~---------------~~~k~~~i~ngi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~i~~~Gr~~~~Kg 199 (355)
T cd03819 141 ---ENYGV---------------DPDRIRVIPRGVDLDRFDPGAVP---PERILALAREWPLPKGKPVILLPGRLTRWKG 199 (355)
T ss_pred ---HhcCC---------------ChhhEEEecCCccccccCccccc---hHHHHHHHHHcCCCCCceEEEEeeccccccC
Confidence 11221 12356778999999887532211 11222245554 46789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+..+++|+..+.+++++++ |+.+|... ....+.+++.+.+.+. +..+.+.+.+. .+++..+|
T Consensus 200 ~~~li~~~~~l~~~~~~~~----l~ivG~~~-----~~~~~~~~~~~~~~~~-------~~~~~v~~~g~--~~~~~~~l 261 (355)
T cd03819 200 QEVFIEALARLKKDDPDVH----LLIVGDAQ-----GRRFYYAELLELIKRL-------GLQDRVTFVGH--CSDMPAAY 261 (355)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEECCc-----ccchHHHHHHHHHHHc-------CCcceEEEcCC--cccHHHHH
Confidence 9999999999988777665 88888432 2233444444443332 22344556665 67899999
Q ss_pred Hhcccceecc-cccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHH
Q 002979 429 AVAECCIVNA-VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (861)
Q Consensus 429 ~~ADv~vvtS-~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 504 (861)
+.||++++|| ..||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|++++++
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~l~~ 322 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAM-------------------GRPVIASDHGGARETVRPGETGLLVPPGDAEALAQ 322 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhc-------------------CCCEEEcCCCCcHHHHhCCCceEEeCCCCHHHHHH
Confidence 9999999999 789999999999999 45689999888877773 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhhhhccC
Q 002979 505 AMTLAINMRDSEKQLRHEKHYRYVSTH 531 (861)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (861)
+|..++..+++++....++.++++.++
T Consensus 323 ~i~~~~~~~~~~~~~~~~~a~~~~~~~ 349 (355)
T cd03819 323 ALDQILSLLPEGRAKMFAKARMCVETL 349 (355)
T ss_pred HHHHHHhhCHHHHHHHHHHHHHHHHHh
Confidence 999888888888888888888777553
No 69
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=99.81 E-value=1.7e-18 Score=196.35 Aligned_cols=281 Identities=18% Similarity=0.144 Sum_probs=183.4
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHH---------HhhcCCEEeecChHhHHHH
Q 002979 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILR---------GLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~---------~ll~~dligF~t~~~~~~F 269 (861)
.|+|.+|+.... ++ +++. ..+.++.+.+| ||......--.+...+.+ .+-.+|.|-..+......+
T Consensus 95 ~Dvi~~~~~~~~-~~-~~~~-~~~~~~i~~~h--~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~s~~~~~~~ 169 (392)
T cd03805 95 YDVFIVDQVSAC-VP-LLKL-FSPSKILFYCH--FPDQLLAQRGSLLKRLYRKPFDWLEEFTTGMADKIVVNSNFTASVF 169 (392)
T ss_pred CCEEEEcCcchH-HH-HHHH-hcCCcEEEEEe--cChHHhcCCCcHHHHHHHHHHHHHHHHHhhCceEEEEcChhHHHHH
Confidence 389999876543 22 2322 22388999999 443321110011111111 1334677766665444333
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002979 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
... ++. .....+.++|+|+|.+.|......+ ..+......++.++++++|+.+.||+
T Consensus 170 ~~~----~~~--------------~~~~~~~vi~n~vd~~~~~~~~~~~-----~~~~~~~~~~~~~i~~~grl~~~Kg~ 226 (392)
T cd03805 170 KKT----FPS--------------LAKNPREVVYPCVDTDSFESTSEDP-----DPGLLIPKSGKKTFLSINRFERKKNI 226 (392)
T ss_pred HHH----hcc--------------cccCCcceeCCCcCHHHcCcccccc-----cccccccCCCceEEEEEeeecccCCh
Confidence 321 110 0111235789999998775321110 11111122567899999999999999
Q ss_pred HHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002979 350 SLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 350 ~~~l~Af~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
..+++|++++.++. |+++ |+.+|..... .++..++.+++.+++++. .+....+.|.|.++.+++..
T Consensus 227 ~~ll~a~~~l~~~~~~~~~~~----l~i~G~~~~~-~~~~~~~~~~l~~~~~~~------~~l~~~V~f~g~~~~~~~~~ 295 (392)
T cd03805 227 ALAIEAFAILKDKLAEFKNVR----LVIAGGYDPR-VAENVEYLEELQRLAEEL------LLLEDQVIFLPSISDSQKEL 295 (392)
T ss_pred HHHHHHHHHHHhhcccccCeE----EEEEcCCCCC-CchhHHHHHHHHHHHHHh------cCCCceEEEeCCCChHHHHH
Confidence 99999999998887 6654 8888854321 122234455555555430 23335677888999999999
Q ss_pred HHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHH
Q 002979 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA 503 (861)
Q Consensus 427 ly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 503 (861)
+|+.||++++||..||||++++|||+| |.|+|+|..+|..+.+. .+++++| |++++|
T Consensus 296 ~l~~ad~~l~~s~~E~~g~~~lEAma~-------------------G~PvI~s~~~~~~e~i~~~~~g~~~~~-~~~~~a 355 (392)
T cd03805 296 LLSSARALLYTPSNEHFGIVPLEAMYA-------------------GKPVIACNSGGPLETVVDGETGFLCEP-TPEEFA 355 (392)
T ss_pred HHhhCeEEEECCCcCCCCchHHHHHHc-------------------CCCEEEECCCCcHHHhccCCceEEeCC-CHHHHH
Confidence 999999999999999999999999999 55699999988887773 3788877 999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHH
Q 002979 504 DAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARS 539 (861)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~ 539 (861)
++|.++++.++ +++.+.++.++++ ..+++..++++
T Consensus 356 ~~i~~l~~~~~-~~~~~~~~a~~~~~~~~s~~~~~~~ 391 (392)
T cd03805 356 EAMLKLANDPD-LADRMGAAGRKRVKEKFSTEAFAER 391 (392)
T ss_pred HHHHHHHhChH-HHHHHHHHHHHHHHHhcCHHHHhhh
Confidence 99999998654 4555566666666 44777766654
No 70
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=99.81 E-value=7.8e-19 Score=203.23 Aligned_cols=199 Identities=14% Similarity=0.098 Sum_probs=132.3
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc
Q 002979 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~ 667 (861)
.++|+|++|+||||++ .++.++++++++|+++ +++|+.|+++|||+...+..++..+. ..++|++||+.|..+++
T Consensus 414 ~~~KLIfsDLDGTLLd---~d~~i~~~t~eAL~~L-~ekGI~~VIATGRs~~~i~~l~~~Lgl~~~~I~eNGA~I~~~~~ 489 (694)
T PRK14502 414 QFKKIVYTDLDGTLLN---PLTYSYSTALDALRLL-KDKELPLVFCSAKTMGEQDLYRNELGIKDPFITENGGAIFIPKD 489 (694)
T ss_pred ceeeEEEEECcCCCcC---CCCccCHHHHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHcCCCCeEEEcCCCEEEECCC
Confidence 4579999999999999 6677888999999999 79999999999999999999887764 24699999999998654
Q ss_pred c---------------eEEecCCccChHHHHHHHHHHHHHhh------cCCCceEeeccce-e-------Eeee------
Q 002979 668 S---------------EWETNHLGADLEWKKIVEPVMRSYTE------ATDGSNIEIKESA-L-------VWHH------ 712 (861)
Q Consensus 668 ~---------------~~~~~~~~~~~~w~~~v~~i~~~y~~------~~~gs~ie~k~~~-l-------~~~~------ 712 (861)
. .+...++ ...+++.+..+.+.+.. ...+.++...... . ....
T Consensus 490 ~~~~~~~~~~~~~~~iI~~~~l~--~e~i~~IL~~lke~l~~~i~ihv~~~~~~i~~~~d~~~~ei~~~TgL~~~~a~~a 567 (694)
T PRK14502 490 YFRLPFAYDRVAGNYLVIELGMA--YKDIRHILKKALAEACTEIENSEKAGNIFITSFGDMSVEDVSRLTDLNLKQAELA 567 (694)
T ss_pred cccccccccccCCCeEEEEcCCC--HHHHHHHHHHHHHhhcceeeeeeccCcEEEecCCcccHHHHHHhhCCCHHHHHHH
Confidence 1 1111111 11223333322221100 0011112111000 0 0000
Q ss_pred --ccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEE--eCCcch
Q 002979 713 --QDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCV--GDDRSD 788 (861)
Q Consensus 713 --~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlai--GD~~ND 788 (861)
+.....+......+.++.+.+.+......+..+..++||. +++|||.|+++|++.+ |++.+++++| ||+.||
T Consensus 568 ~~Re~seKIl~~gd~e~Leel~~~L~~~~l~v~~g~rfleI~-~gvdKG~AL~~L~e~~---gI~~~eViafalGDs~ND 643 (694)
T PRK14502 568 KQREYSETVHIEGDKRSTNIVLNHIQQSGLEYSFGGRFYEVT-GGNDKGKAIKILNELF---RLNFGNIHTFGLGDSEND 643 (694)
T ss_pred hhccCceeEEEcCCHHHHHHHHHHHHHcCcEEEECCEEEEeC-CCCCHHHHHHHHHHHh---CCCccceEEEEcCCcHhh
Confidence 0000011111123455556555555456666799999999 5999999999999999 9999999999 999999
Q ss_pred HHHHHHccc
Q 002979 789 EDMFESILS 797 (861)
Q Consensus 789 ~~Mf~~ag~ 797 (861)
++||+.+|.
T Consensus 644 isMLe~Ag~ 652 (694)
T PRK14502 644 YSMLETVDS 652 (694)
T ss_pred HHHHHhCCc
Confidence 999999996
No 71
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=99.81 E-value=1.5e-18 Score=192.81 Aligned_cols=275 Identities=17% Similarity=0.147 Sum_probs=199.9
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCCh--HHHh---cCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002979 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSS--EIYR---TLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~--e~f~---~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
.++ |+||+|.+..... +....++.+.+|-.+|.. +.+. ....+..+...+..+|.+-+.+...++.+
T Consensus 84 ~~~--Dii~~~~~~~~~~------~~~~~~~i~~~hd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~~~~ 155 (365)
T cd03809 84 LGL--DLLHSPHNTAPLL------RLRGVPVVVTIHDLIPLRFPEYFSPGFRRYFRRLLRRALRRADAIITVSEATKRDL 155 (365)
T ss_pred cCC--CeeeecccccCcc------cCCCCCEEEEeccchhhhCcccCCHHHHHHHHHHHHHHHHHcCEEEEccHHHHHHH
Confidence 455 9999998887766 556899999999765532 1111 11234445566678899988887666666
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002979 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
.... +. ...++.++|+|+|...+... .... ........++++|+++||+.+.||+
T Consensus 156 ~~~~----~~---------------~~~~~~vi~~~~~~~~~~~~-----~~~~-~~~~~~~~~~~~i~~~G~~~~~K~~ 210 (365)
T cd03809 156 LRYL----GV---------------PPDKIVVIPLGVDPRFRPPP-----AEAE-VLRALYLLPRPYFLYVGTIEPRKNL 210 (365)
T ss_pred HHHh----Cc---------------CHHHEEeeccccCccccCCC-----chHH-HHHHhcCCCCCeEEEeCCCccccCH
Confidence 5421 11 12356678999998776421 1111 1122233678899999999999999
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002979 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
...++|+..+.+.+|+++ |+.+|... ........+++ + .+..+.+.+.+.++.+++..+|+
T Consensus 211 ~~~l~~~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~ 271 (365)
T cd03809 211 ERLLEAFARLPAKGPDPK----LVIVGKRG----WLNEELLARLR----E-------LGLGDRVRFLGYVSDEELAALYR 271 (365)
T ss_pred HHHHHHHHHHHHhcCCCC----EEEecCCc----cccHHHHHHHH----H-------cCCCCeEEECCCCChhHHHHHHh
Confidence 999999999999888655 88777432 11122222221 1 23346778889999999999999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHH
Q 002979 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~ 508 (861)
.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+ .+++.++|.|.++++++|.+
T Consensus 272 ~~d~~l~ps~~e~~~~~~~Ea~a~-------------------G~pvI~~~~~~~~e~~~~~~~~~~~~~~~~~~~~i~~ 332 (365)
T cd03809 272 GARAFVFPSLYEGFGLPVLEAMAC-------------------GTPVIASNISSLPEVAGDAALYFDPLDPEALAAAIER 332 (365)
T ss_pred hhhhhcccchhccCCCCHHHHhcC-------------------CCcEEecCCCCccceecCceeeeCCCCHHHHHHHHHH
Confidence 999999999999999999999999 4568888888877766 56899999999999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002979 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+++ +++.+....+..++++..+++..++++++
T Consensus 333 l~~-~~~~~~~~~~~~~~~~~~~sw~~~~~~~~ 364 (365)
T cd03809 333 LLE-DPALREELRERGLARAKRFSWEKTARRTL 364 (365)
T ss_pred Hhc-CHHHHHHHHHHHHHHHHhCCHHHHHHHHh
Confidence 986 55555666666677888899999998775
No 72
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.81 E-value=1.2e-18 Score=198.79 Aligned_cols=292 Identities=12% Similarity=0.048 Sum_probs=184.2
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeE-EEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKL-GFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i-~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
++...+| |+|+.|++.-.++..+.... ..+++ ....|. ++...--+.+-... +.+..++++--.+. +..+.
T Consensus 275 ~ir~~rp--DIVHt~~~~a~l~g~laA~l-agvpviv~~~h~-~~~~~~~r~~~~e~---~~~~~a~~i~~~sd-~v~~s 346 (578)
T PRK15490 275 HLCERKL--DYLSVWQDGACLMIALAALI-AGVPRIQLGLRG-LPPVVRKRLFKPEY---EPLYQALAVVPGVD-FMSNN 346 (578)
T ss_pred HHHHcCC--CEEEEcCcccHHHHHHHHHh-cCCCEEEEeecc-cCCcchhhHHHHHH---HHhhhhceeEecch-hhhcc
Confidence 4445577 99999999976655444333 24545 344565 33221111110111 12333444332222 33222
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccC
Q 002979 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKG 348 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KG 348 (861)
....+.+.. .+.-...+|.++|+|||+..|.+....+ ......++..+ .+..+|++|+|+.+.||
T Consensus 347 ~~v~~~l~~------------~lgip~~KI~VIyNGVD~~rf~p~~~~~--~~~r~~~~~~l~~~~~vIg~VgRl~~~Kg 412 (578)
T PRK15490 347 HCVTRHYAD------------WLKLEAKHFQVVYNGVLPPSTEPSSEVP--HKIWQQFTQKTQDADTTIGGVFRFVGDKN 412 (578)
T ss_pred HHHHHHHHH------------HhCCCHHHEEEEeCCcchhhcCccchhh--HHHHHHhhhccCCCCcEEEEEEEEehhcC
Confidence 222221110 0011234678899999998886432111 11122222223 34568899999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
....|.|+.++++++|+++ |+++| +|+..+++++. +++ .+..+.+.|.|. .+++..+|
T Consensus 413 ~~~LI~A~a~llk~~pdir----LvIVG-----dG~~~eeLk~l----a~e-------lgL~d~V~FlG~--~~Dv~~~L 470 (578)
T PRK15490 413 PFAWIDFAARYLQHHPATR----FVLVG-----DGDLRAEAQKR----AEQ-------LGILERILFVGA--SRDVGYWL 470 (578)
T ss_pred HHHHHHHHHHHHhHCCCeE----EEEEe-----CchhHHHHHHH----HHH-------cCCCCcEEECCC--hhhHHHHH
Confidence 9999999999999999866 88888 34443444433 333 233455667766 56899999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCCCCHHHHHHH
Q 002979 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~~~A~a 505 (861)
+.||+||+||.+||||++++|||+| +.|+|+|..+|+.+.+ .+|++|+|.|+++++++
T Consensus 471 aaADVfVlPS~~EGfp~vlLEAMA~-------------------GlPVVATdvGG~~EiV~dG~nG~LVp~~D~~aLa~a 531 (578)
T PRK15490 471 QKMNVFILFSRYEGLPNVLIEAQMV-------------------GVPVISTPAGGSAECFIEGVSGFILDDAQTVNLDQA 531 (578)
T ss_pred HhCCEEEEcccccCccHHHHHHHHh-------------------CCCEEEeCCCCcHHHcccCCcEEEECCCChhhHHHH
Confidence 9999999999999999999999999 4569999999988877 34899999999999998
Q ss_pred HHHHhcCCH--HHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHH
Q 002979 506 MTLAINMRD--SEKQLRHEKHYRYVS-THDVAYWARSFAQDLE 545 (861)
Q Consensus 506 i~~aL~m~~--~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~ 545 (861)
+..+..+.. ..+....++.++++. .+++...++.+++-+.
T Consensus 532 i~lA~aL~~ll~~~~~mg~~ARe~V~e~FS~e~Mv~~y~ki~~ 574 (578)
T PRK15490 532 CRYAEKLVNLWRSRTGICQQTQSFLQERFTVEHMVGTFVKTIA 574 (578)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHH
Confidence 854433222 223334456677764 5888888888776554
No 73
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=99.81 E-value=7.5e-19 Score=209.37 Aligned_cols=281 Identities=14% Similarity=0.126 Sum_probs=180.9
Q ss_pred HHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEE-EEecCCC---ChHHHhcCCchHHHHHHhhcCCEEeecC-hHhH
Q 002979 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGF-FLHSPFP---SSEIYRTLPVRDEILRGLLNCDLIGFHT-FDYA 266 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~-flH~PfP---~~e~f~~lp~r~~il~~ll~~dligF~t-~~~~ 266 (861)
++..+| |+|++|.+.-.++..+..+. ..+++.+ .+|. +| ..+.++. ....+.+.+..++.+-+-+ ..+.
T Consensus 396 lk~~kp--DIVH~h~~~a~~lg~lAa~~-~gvPvIv~t~h~-~~~~~~~~~~~~--~~~~l~~~l~~~~~~i~Vs~S~~~ 469 (694)
T PRK15179 396 MRSSVP--SVVHIWQDGSIFACALAALL-AGVPRIVLSVRT-MPPVDRPDRYRV--EYDIIYSELLKMRGVALSSNSQFA 469 (694)
T ss_pred HHHcCC--cEEEEeCCcHHHHHHHHHHH-cCCCEEEEEeCC-CccccchhHHHH--HHHHHHHHHHhcCCeEEEeCcHHH
Confidence 344467 99999998876666666543 3455544 4454 22 2222210 0111223333344333322 2222
Q ss_pred -HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcc
Q 002979 267 -RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMD 344 (861)
Q Consensus 267 -~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld 344 (861)
+.+.. .++ ....+|.++|+|||...|.. .+........++... .+.++|++|+|++
T Consensus 470 ~~~l~~----~~g---------------~~~~kI~VI~NGVd~~~f~~---~~~~~~~~~~~~~~~~~~~~vIg~VGRL~ 527 (694)
T PRK15179 470 AHRYAD----WLG---------------VDERRIPVVYNGLAPLKSVQ---DDACTAMMAQFDARTSDARFTVGTVMRVD 527 (694)
T ss_pred HHHHHH----HcC---------------CChhHEEEECCCcCHHhcCC---CchhhHHHHhhccccCCCCeEEEEEEeCC
Confidence 22322 112 12246788999999887742 121111122222222 3467899999999
Q ss_pred cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHH
Q 002979 345 IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEK 424 (861)
Q Consensus 345 ~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el 424 (861)
+.||+..+|+||.++++++|+++ |+++|. |+..++++ +++++ .+....+.|.|.. .++
T Consensus 528 ~~KG~~~LI~A~a~l~~~~p~~~----LvIvG~-----G~~~~~L~----~l~~~-------lgL~~~V~flG~~--~dv 585 (694)
T PRK15179 528 DNKRPFLWVEAAQRFAASHPKVR----FIMVGG-----GPLLESVR----EFAQR-------LGMGERILFTGLS--RRV 585 (694)
T ss_pred ccCCHHHHHHHHHHHHHHCcCeE----EEEEcc-----CcchHHHH----HHHHH-------cCCCCcEEEcCCc--chH
Confidence 99999999999999999999876 888884 33333343 34433 2344667788775 479
Q ss_pred HHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCH--
Q 002979 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDI-- 499 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~-- 499 (861)
..+|+.||+||+||.+|||+++++|||+| +.|+|+|..+|+.+.+. .|++|+|.|.
T Consensus 586 ~~ll~aaDv~VlpS~~Egfp~vlLEAMA~-------------------G~PVVat~~gG~~EiV~dg~~GlLv~~~d~~~ 646 (694)
T PRK15179 586 GYWLTQFNAFLLLSRFEGLPNVLIEAQFS-------------------GVPVVTTLAGGAGEAVQEGVTGLTLPADTVTA 646 (694)
T ss_pred HHHHHhcCEEEeccccccchHHHHHHHHc-------------------CCeEEEECCCChHHHccCCCCEEEeCCCCCCh
Confidence 99999999999999999999999999999 55689999988888883 4899998885
Q ss_pred HHHHHHHHHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHHH
Q 002979 500 DAVADAMTLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFAQ 542 (861)
Q Consensus 500 ~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl~ 542 (861)
++++++|.+++........ ..++.++++ ..+++...++.+++
T Consensus 647 ~~La~aL~~ll~~l~~~~~-l~~~ar~~a~~~FS~~~~~~~~~~ 689 (694)
T PRK15179 647 PDVAEALARIHDMCAADPG-IARKAADWASARFSLNQMIASTVR 689 (694)
T ss_pred HHHHHHHHHHHhChhccHH-HHHHHHHHHHHhCCHHHHHHHHHH
Confidence 6899999988865432222 234555555 46777777776654
No 74
>PRK10307 putative glycosyl transferase; Provisional
Probab=99.80 E-value=8.9e-18 Score=192.29 Aligned_cols=282 Identities=17% Similarity=0.148 Sum_probs=192.4
Q ss_pred CEEEEeCccccc-HHHHHHhhcCCCeEEEEEecCCCChHHHh-cCC--ch----HHHHHH-hhcCCEEeecChHhHHHHH
Q 002979 200 DCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSPFPSSEIYR-TLP--VR----DEILRG-LLNCDLIGFHTFDYARHFL 270 (861)
Q Consensus 200 D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~PfP~~e~f~-~lp--~r----~~il~~-ll~~dligF~t~~~~~~Fl 270 (861)
|+|++|...+.. ...++-.+..+.++.+..|--||..-.-. .++ .. ..+.+. +-.+|.|-..+....+.+.
T Consensus 108 Div~~~~p~~~~~~~~~~~~~~~~~~~v~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ad~ii~~S~~~~~~~~ 187 (412)
T PRK10307 108 DRVIGVVPTLFCAPGARLLARLSGARTWLHIQDYEVDAAFGLGLLKGGKVARLATAFERSLLRRFDNVSTISRSMMNKAR 187 (412)
T ss_pred CEEEEeCCcHHHHHHHHHHHHhhCCCEEEEeccCCHHHHHHhCCccCcHHHHHHHHHHHHHHhhCCEEEecCHHHHHHHH
Confidence 999999866543 33333344445678877776555321100 010 00 111122 2357888888876666553
Q ss_pred HHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccccc
Q 002979 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFK 347 (861)
Q Consensus 271 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~K 347 (861)
+ .+ ....++.++|+|||.+.|.... ......+++++ .++++|+++||+.+.|
T Consensus 188 ~-----~~---------------~~~~~i~vi~ngvd~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~G~l~~~k 242 (412)
T PRK10307 188 E-----KG---------------VAAEKVIFFPNWSEVARFQPVA-----DADVDALRAQLGLPDGKKIVLYSGNIGEKQ 242 (412)
T ss_pred H-----cC---------------CCcccEEEECCCcCHhhcCCCC-----ccchHHHHHHcCCCCCCEEEEEcCcccccc
Confidence 2 11 1223677899999998875321 11123355555 4578999999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002979 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (861)
Q Consensus 348 Gi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~al 427 (861)
|+..+++|++++ +++|+++ |+++| +|+..+++++. +++. +... +.|.|.++.+++..+
T Consensus 243 g~~~li~a~~~l-~~~~~~~----l~ivG-----~g~~~~~l~~~----~~~~-------~l~~-v~f~G~~~~~~~~~~ 300 (412)
T PRK10307 243 GLELVIDAARRL-RDRPDLI----FVICG-----QGGGKARLEKM----AQCR-------GLPN-VHFLPLQPYDRLPAL 300 (412)
T ss_pred CHHHHHHHHHHh-ccCCCeE----EEEEC-----CChhHHHHHHH----HHHc-------CCCc-eEEeCCCCHHHHHHH
Confidence 999999999876 4456544 88887 34444444433 3322 2233 566788999999999
Q ss_pred HHhcccceecccccCCCCc----ceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC--cccC-CCceEeCCCCHH
Q 002979 428 YAVAECCIVNAVRDGMNLV----PYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--SPSL-SGAIRVNPWDID 500 (861)
Q Consensus 428 y~~ADv~vvtS~~EG~nLv----~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-~~ai~vnP~d~~ 500 (861)
|+.||++|+||..|+++++ .+|||+| +.|+|+|..+|. .+.+ ..|++++|.|++
T Consensus 301 ~~~aDi~v~ps~~e~~~~~~p~kl~eama~-------------------G~PVi~s~~~g~~~~~~i~~~G~~~~~~d~~ 361 (412)
T PRK10307 301 LKMADCHLLPQKAGAADLVLPSKLTNMLAS-------------------GRNVVATAEPGTELGQLVEGIGVCVEPESVE 361 (412)
T ss_pred HHhcCEeEEeeccCcccccCcHHHHHHHHc-------------------CCCEEEEeCCCchHHHHHhCCcEEeCCCCHH
Confidence 9999999999999996554 5899999 456889888774 2434 568999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHHHHH
Q 002979 501 AVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLERAC 548 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~~~ 548 (861)
++|++|.++++. ++++..+.++.++++. .+++...+++|++.+.+..
T Consensus 362 ~la~~i~~l~~~-~~~~~~~~~~a~~~~~~~fs~~~~~~~~~~~~~~~~ 409 (412)
T PRK10307 362 ALVAAIAALARQ-ALLRPKLGTVAREYAERTLDKENVLRQFIADIRGLV 409 (412)
T ss_pred HHHHHHHHHHhC-HHHHHHHHHHHHHHHHHHcCHHHHHHHHHHHHHHHh
Confidence 999999999874 4556666777787775 5899999999988887653
No 75
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=99.80 E-value=6.8e-18 Score=196.39 Aligned_cols=271 Identities=14% Similarity=0.082 Sum_probs=180.1
Q ss_pred CCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChH-HHhc----CCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002979 198 DDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSE-IYRT----LPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 198 ~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e-~f~~----lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+.|+|.++--.... +.++ +..+.+++..++|.-.=+.. .-.. -+.-+..++.+-.+|.|-..|..-.+.....
T Consensus 211 ~~di~i~dr~~~~~-~~~~-~~~~~~~~v~~lH~~h~~~~~~~~~~~~~~~~y~~~~~~~~~~D~iI~~S~~~~~~l~~~ 288 (500)
T TIGR02918 211 KKDIIILDRSTGIG-QAVL-ENKGPAKLGVVVHAEHFSESATNETYILWNNYYEYQFSNADYIDFFITATDIQNQILKNQ 288 (500)
T ss_pred CCCEEEEcCCcccc-hHHH-hcCCCceEEEEEChhhhcCccCcchhHHHHHHHHHHHhchhhCCEEEECCHHHHHHHHHH
Confidence 34898887555433 4444 55668999999995431000 0000 0111223444445677766665443333221
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
... +.+...+|.++|+|++...+. +. ....+..|++|||+.+.||+..+
T Consensus 289 ~~~----------------~~~~~~ki~viP~g~~~~~~~-----~~----------~~r~~~~il~vGrl~~~Kg~~~l 337 (500)
T TIGR02918 289 FKK----------------YYNIEPRIYTIPVGSLDELQY-----PE----------QERKPFSIITASRLAKEKHIDWL 337 (500)
T ss_pred hhh----------------hcCCCCcEEEEcCCCcccccC-----cc----------cccCCeEEEEEeccccccCHHHH
Confidence 111 112234567889998754321 10 01234689999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002979 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
|+|+.++.+++|+++ |+++| +|++.++ +++++++. +....+.+.|.. ++..+|+.||
T Consensus 338 i~A~~~l~~~~p~~~----l~i~G-----~G~~~~~----l~~~i~~~-------~l~~~V~f~G~~---~~~~~~~~ad 394 (500)
T TIGR02918 338 VKAVVKAKKSVPELT----FDIYG-----EGGEKQK----LQKIINEN-------QAQDYIHLKGHR---NLSEVYKDYE 394 (500)
T ss_pred HHHHHHHHhhCCCeE----EEEEE-----CchhHHH----HHHHHHHc-------CCCCeEEEcCCC---CHHHHHHhCC
Confidence 999999999999876 88887 3444333 34444332 223456677754 5788999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCC-CCcccCC---CceEeCC----CC----HH
Q 002979 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSLS---GAIRVNP----WD----ID 500 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l~---~ai~vnP----~d----~~ 500 (861)
++|+||.+||||++++||||| |.|+|+|... |..+.+. +|++|++ .| ++
T Consensus 395 v~v~pS~~Egfgl~~lEAma~-------------------G~PVI~~dv~~G~~eiI~~g~nG~lv~~~~~~~d~~~~~~ 455 (500)
T TIGR02918 395 LYLSASTSEGFGLTLMEAVGS-------------------GLGMIGFDVNYGNPTFIEDNKNGYLIPIDEEEDDEDQIIT 455 (500)
T ss_pred EEEEcCccccccHHHHHHHHh-------------------CCCEEEecCCCCCHHHccCCCCEEEEeCCccccchhHHHH
Confidence 999999999999999999999 5568998986 6666662 4899973 34 89
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002979 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
++|++|.++++ +++++...+..++....++...-++.+.+-++
T Consensus 456 ~la~~I~~ll~--~~~~~~~~~~a~~~a~~fs~~~v~~~w~~ll~ 498 (500)
T TIGR02918 456 ALAEKIVEYFN--SNDIDAFHEYSYQIAEGFLTANIIEKWKKLVR 498 (500)
T ss_pred HHHHHHHHHhC--hHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh
Confidence 99999999994 44566677778888888888887777775554
No 76
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=99.80 E-value=7.1e-18 Score=187.48 Aligned_cols=268 Identities=17% Similarity=0.141 Sum_probs=191.0
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002979 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+..++ |+|++|..+...+..++..+....+..+.+|.+-..... ....+.+.+-.+|.+-..+....+.+.+.
T Consensus 76 ~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~vi~~s~~~~~~l~~~ 148 (355)
T cd03799 76 RRLGI--DHIHAHFGTTPATVAMLASRLGGIPYSFTAHGKDIFRSP-----DAIDLDEKLARADFVVAISEYNRQQLIRL 148 (355)
T ss_pred HhcCC--CEEEECCCCchHHHHHHHHHhcCCCEEEEEecccccccC-----chHHHHHHHhhCCEEEECCHHHHHHHHHh
Confidence 34455 999999877666666666666678899989854221111 11234445567999988888766665541
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.+ ....++.++|+|+|.+.+.... .....++..|+++||+.+.||+..+
T Consensus 149 ----~~---------------~~~~~~~vi~~~~d~~~~~~~~------------~~~~~~~~~i~~~g~~~~~k~~~~l 197 (355)
T cd03799 149 ----LG---------------CDPDKIHVVHCGVDLERFPPRP------------PPPPGEPLRILSVGRLVEKKGLDYL 197 (355)
T ss_pred ----cC---------------CCcccEEEEeCCcCHHHcCCcc------------ccccCCCeEEEEEeeeccccCHHHH
Confidence 01 1234677899999988774211 1122457789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002979 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|++++.++.|+++ |+.+|. ++...++++.+. +. +..+.+.+.+.++.+++.++|+.||
T Consensus 198 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~~~~----~~-------~~~~~v~~~g~~~~~~l~~~~~~ad 257 (355)
T cd03799 198 LEALALLKDRGIDFR----LDIVGD-----GPLRDELEALIA----EL-------GLEDRVTLLGAKSQEEVRELLRAAD 257 (355)
T ss_pred HHHHHHHhhcCCCeE----EEEEEC-----CccHHHHHHHHH----Hc-------CCCCeEEECCcCChHHHHHHHHhCC
Confidence 999999987766654 887773 233233333332 22 3345678889999999999999999
Q ss_pred cceecccc------cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHH
Q 002979 433 CCIVNAVR------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA 503 (861)
Q Consensus 433 v~vvtS~~------EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 503 (861)
++++||.. ||||++.+|||+| +.|+|+|..+|..+.+. .|++++|.|+++++
T Consensus 258 i~l~~s~~~~~~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~i~~~~~g~~~~~~~~~~l~ 318 (355)
T cd03799 258 LFVLPSVTAADGDREGLPVVLMEAMAM-------------------GLPVISTDVSGIPELVEDGETGLLVPPGDPEALA 318 (355)
T ss_pred EEEecceecCCCCccCccHHHHHHHHc-------------------CCCEEecCCCCcchhhhCCCceEEeCCCCHHHHH
Confidence 99999999 9999999999999 45688898877776662 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHH
Q 002979 504 DAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWAR 538 (861)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~ 538 (861)
++|.++++.+.. +....+..++++. .+++...++
T Consensus 319 ~~i~~~~~~~~~-~~~~~~~a~~~~~~~~s~~~~~~ 353 (355)
T cd03799 319 DAIERLLDDPEL-RREMGEAGRARVEEEFDIRKQAA 353 (355)
T ss_pred HHHHHHHhCHHH-HHHHHHHHHHHHHHhcCHHHHhh
Confidence 999999985543 4445555566653 466555543
No 77
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=99.80 E-value=4.2e-18 Score=188.78 Aligned_cols=274 Identities=19% Similarity=0.173 Sum_probs=181.8
Q ss_pred CEEEEeCccc-ccHHHHHHhhcCCCeEEEEEecCCCChHH-Hh----cCCchHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002979 200 DCVWVHDYHL-MVLPTFLRKRFNRIKLGFFLHSPFPSSEI-YR----TLPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 200 D~VwvhDyhl-~llp~~lr~~~~~~~i~~flH~PfP~~e~-f~----~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
|+|++|+... ...+.....+..+.++.+..|-.++.... ++ .+.........+-.+|.+.+.+.........
T Consensus 89 dii~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~s~~~~~~~~~-- 166 (375)
T cd03821 89 DIVHVHGLWSYPSLAAARAARKYGIPYVVSPHGMLDPWALPHKALKKRLAWFLFERRLLQAAAAVHATSEQEAAEIRR-- 166 (375)
T ss_pred CEEEEecccchHHHHHHHHHHHhCCCEEEEccccccccccccchhhhHHHHHHHHHHHHhcCCEEEECCHHHHHHHHh--
Confidence 9999998432 22333322233568899999976654321 10 0000000111223456666655333322211
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHH
Q 002979 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGIS 350 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~ 350 (861)
.+...++.++|+|+|.+.+... +.. .. ++.+ .++++++++||+++.||+.
T Consensus 167 -------------------~~~~~~~~vi~~~~~~~~~~~~---~~~--~~---~~~~~~~~~~~~i~~~G~~~~~K~~~ 219 (375)
T cd03821 167 -------------------LGLKAPIAVIPNGVDIPPFAAL---PSR--GR---RRKFPILPDKRIILFLGRLHPKKGLD 219 (375)
T ss_pred -------------------hCCcccEEEcCCCcChhccCcc---hhh--hh---hhhccCCCCCcEEEEEeCcchhcCHH
Confidence 1123467789999999877521 111 11 2222 5678999999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002979 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (861)
Q Consensus 351 ~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 430 (861)
.+++|+.++.+++|+++ |+.+|... +.....+ ..++.+ .+..+.+.+.|.++.+++..+|+.
T Consensus 220 ~li~a~~~l~~~~~~~~----l~i~G~~~---~~~~~~~----~~~~~~-------~~~~~~v~~~g~~~~~~~~~~~~~ 281 (375)
T cd03821 220 LLIEAFAKLAERFPDWH----LVIAGPDE---GGYRAEL----KQIAAA-------LGLEDRVTFTGMLYGEDKAAALAD 281 (375)
T ss_pred HHHHHHHHhhhhcCCeE----EEEECCCC---cchHHHH----HHHHHh-------cCccceEEEcCCCChHHHHHHHhh
Confidence 99999999999888766 88887422 1211222 222222 234456778899999999999999
Q ss_pred cccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-C-ceEeCCCCHHHHHHHHHH
Q 002979 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G-AIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 431 ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~-ai~vnP~d~~~~A~ai~~ 508 (861)
||++|+||..||||++++|||+| |.|+|+|..+|..+.+. + ++++ |.+.++++++|.+
T Consensus 282 adv~v~ps~~e~~~~~~~Eama~-------------------G~PvI~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~i~~ 341 (375)
T cd03821 282 ADLFVLPSHSENFGIVVAEALAC-------------------GTPVVTTDKVPWQELIEYGCGWVV-DDDVDALAAALRR 341 (375)
T ss_pred CCEEEeccccCCCCcHHHHHHhc-------------------CCCEEEcCCCCHHHHhhcCceEEe-CCChHHHHHHHHH
Confidence 99999999999999999999999 45699999988887773 3 4444 5567999999999
Q ss_pred HhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHH
Q 002979 509 AINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl 541 (861)
+++.+ +++....++.+++ ...+++...++.++
T Consensus 342 l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 374 (375)
T cd03821 342 ALELP-QRLKAMGENGRALVEERFSWTAIAQQLL 374 (375)
T ss_pred HHhCH-HHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 99876 5566666666666 46677777776654
No 78
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=99.80 E-value=9.1e-18 Score=191.87 Aligned_cols=272 Identities=14% Similarity=0.098 Sum_probs=190.4
Q ss_pred CCCCCEEEEeCccccc-HHHHHHhhcCCCeEEEEEecC--CCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002979 196 NPDDDCVWVHDYHLMV-LPTFLRKRFNRIKLGFFLHSP--FPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 196 ~p~~D~VwvhDyhl~l-lp~~lr~~~~~~~i~~flH~P--fP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+++.|+++.|-+|-.. .-.++.++....++....|-. ++.......++.++.+ +-.+|.|-+.+....+.+...
T Consensus 125 ~~~~~v~~sy~~~~~~~~~~~l~~~~~~~~~i~~~Hg~d~~~~~~~~~~~~~~~~~---~~~~d~ii~~S~~~~~~l~~~ 201 (407)
T cd04946 125 DGQGTVFYSYWLHETAYALALLKKEYLRKRVISRAHGYDLYEDRYPSGYIPLRRYL---LSSLDAVFPCSEQGRNYLQKR 201 (407)
T ss_pred ccCceEEEEecCchHHHHHHHHHHhcCCceEEEEeccchhhhhhccccchHHHHHH---HhcCCEEEECCHHHHHHHHHH
Confidence 4445777776555433 334566766666788888842 1111111122233333 346899988887665544321
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.+ ....++.++|+|++...+... ....++..|+++||+.+.||+..+
T Consensus 202 ----~~---------------~~~~ki~vi~~gv~~~~~~~~--------------~~~~~~~~il~~Grl~~~Kg~~~l 248 (407)
T cd04946 202 ----YP---------------AYKEKIKVSYLGVSDPGIISK--------------PSKDDTLRIVSCSYLVPVKRVDLI 248 (407)
T ss_pred ----CC---------------CccccEEEEECCcccccccCC--------------CCCCCCEEEEEeeccccccCHHHH
Confidence 11 122356788999998765311 011457789999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh--
Q 002979 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV-- 430 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~-- 430 (861)
++|+.++.+++|+.. +.++.+| +|++..++++.+. + .+..+.+.+.|.++.+|+.++|+.
T Consensus 249 i~a~~~l~~~~p~~~--l~~~iiG-----~g~~~~~l~~~~~----~-------~~~~~~V~f~G~v~~~e~~~~~~~~~ 310 (407)
T cd04946 249 IKALAALAKARPSIK--IKWTHIG-----GGPLEDTLKELAE----S-------KPENISVNFTGELSNSEVYKLYKENP 310 (407)
T ss_pred HHHHHHHHHhCCCce--EEEEEEe-----CchHHHHHHHHHH----h-------cCCCceEEEecCCChHHHHHHHhhcC
Confidence 999999999998764 6677777 3444444444332 1 122346678899999999999986
Q ss_pred cccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCC---ceEeCC-CCHHHHHHHH
Q 002979 431 AECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG---AIRVNP-WDIDAVADAM 506 (861)
Q Consensus 431 ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP-~d~~~~A~ai 506 (861)
||+|+.||..|||+++++|||+| |.|+|+|..+|..+.+.+ |++++| .|++++|++|
T Consensus 311 ~~v~v~~S~~Eg~p~~llEAma~-------------------G~PVIas~vgg~~e~i~~~~~G~l~~~~~~~~~la~~I 371 (407)
T cd04946 311 VDVFVNLSESEGLPVSIMEAMSF-------------------GIPVIATNVGGTPEIVDNGGNGLLLSKDPTPNELVSSL 371 (407)
T ss_pred CCEEEeCCccccccHHHHHHHHc-------------------CCCEEeCCCCCcHHHhcCCCcEEEeCCCCCHHHHHHHH
Confidence 67899999999999999999999 456999999998888843 588876 4899999999
Q ss_pred HHHhcCCHHHHHHHHHHhhhhh-ccCCHhHHHHHHH
Q 002979 507 TLAINMRDSEKQLRHEKHYRYV-STHDVAYWARSFA 541 (861)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v-~~~~~~~W~~~fl 541 (861)
.++++ +++++..+.++.++++ ..++...+.++|+
T Consensus 372 ~~ll~-~~~~~~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 372 SKFID-NEEEYQTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred HHHHh-CHHHHHHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 99998 5566666677777777 4588888877765
No 79
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=99.79 E-value=7.5e-18 Score=185.32 Aligned_cols=286 Identities=19% Similarity=0.155 Sum_probs=202.0
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHh----cCCchHHHHHHhhcCCEEeecChHhH
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYR----TLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~----~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
+++..++ |+|++|+++...+.. +..+.++.++.+.+|.++|...... ...........+..+|.+-+.+....
T Consensus 80 ~~~~~~~--Dii~~~~~~~~~~~~-~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~s~~~~ 156 (374)
T cd03801 80 LLRRERF--DVVHAHDWLALLAAA-LAARLLGIPLVLTVHGLEFGRPGNELGLLLKLARALERRALRRADRIIAVSEATR 156 (374)
T ss_pred HhhhcCC--cEEEEechhHHHHHH-HHHHhcCCcEEEEeccchhhccccchhHHHHHHHHHHHHHHHhCCEEEEecHHHH
Confidence 4444466 999999999887776 4455678999999999887543211 11112223333456788888887666
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccc
Q 002979 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 346 (861)
+.+.+.. .....++.++|+|+|...+... . ...........+++.++++||+++.
T Consensus 157 ~~~~~~~-------------------~~~~~~~~~i~~~~~~~~~~~~-----~-~~~~~~~~~~~~~~~i~~~g~~~~~ 211 (374)
T cd03801 157 EELRELG-------------------GVPPEKITVIPNGVDTERFRPA-----P-RAARRRLGIPEDEPVILFVGRLVPR 211 (374)
T ss_pred HHHHhcC-------------------CCCCCcEEEecCcccccccCcc-----c-hHHHhhcCCcCCCeEEEEecchhhh
Confidence 6555410 0112367788999998776421 0 1111111112457899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002979 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
||+...++|+..+.+++|+++ |+.+| .++....+++.+. + .+..+.+.+.+.++.+|+..
T Consensus 212 k~~~~~i~~~~~~~~~~~~~~----l~i~G-----~~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~ 271 (374)
T cd03801 212 KGVDLLLEALAKLRKEYPDVR----LVIVG-----DGPLREELEALAA----E-------LGLGDRVTFLGFVPDEDLPA 271 (374)
T ss_pred cCHHHHHHHHHHHhhhcCCeE----EEEEe-----CcHHHHHHHHHHH----H-------hCCCcceEEEeccChhhHHH
Confidence 999999999999988887654 88777 2334344443332 2 12334567788999999999
Q ss_pred HHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHH
Q 002979 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVA 503 (861)
Q Consensus 427 ly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A 503 (861)
+|+.||++++|+..||+|++++|||+| |.|+|++...|..+.+. .++++++.|+++++
T Consensus 272 ~~~~~di~i~~~~~~~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~ 332 (374)
T cd03801 272 LYAAADVFVLPSLYEGFGLVLLEAMAA-------------------GLPVVASDVGGIPEVVEDGETGLLVPPGDPEALA 332 (374)
T ss_pred HHHhcCEEEecchhccccchHHHHHHc-------------------CCcEEEeCCCChhHHhcCCcceEEeCCCCHHHHH
Confidence 999999999999999999999999999 55689999988888874 48999999999999
Q ss_pred HHHHHHhcCCHHHHHHHHHHhh-hhhccCCHhHHHHHHHHHH
Q 002979 504 DAMTLAINMRDSEKQLRHEKHY-RYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 504 ~ai~~aL~m~~~e~~~r~~~~~-~~v~~~~~~~W~~~fl~~l 544 (861)
++|.++++.++. +....++.+ .....+++..+++.+.+.+
T Consensus 333 ~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 373 (374)
T cd03801 333 EAILRLLDDPEL-RRRLGEAARERVAERFSWDRVAARTEEVY 373 (374)
T ss_pred HHHHHHHcChHH-HHHHHHHHHHHHHHhcCHHHHHHHHHHhh
Confidence 999999985543 344444444 4566789999988877643
No 80
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.79 E-value=7.3e-18 Score=187.05 Aligned_cols=274 Identities=17% Similarity=0.142 Sum_probs=191.1
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCch----HHHHH-HhhcCCEEeecChHhHH
Q 002979 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR----DEILR-GLLNCDLIGFHTFDYAR 267 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r----~~il~-~ll~~dligF~t~~~~~ 267 (861)
+..+| |+|++|......+...+..+..++++.+.+|..||..-........ ..+.+ ..-.+|.+-+.+.....
T Consensus 80 ~~~~p--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~~s~~~~~ 157 (364)
T cd03814 80 DAFAP--DVVHIATPGPLGLAALRAARRLGIPVVTSYHTDFPEYLRYYGLGPLSWLAWAYLRWFHNRADRVLVPSPSLAD 157 (364)
T ss_pred HhcCC--CEEEEeccchhhHHHHHHHHHcCCCEEEEEecChHHHhhhcccchHhHhhHHHHHHHHHhCCEEEeCCHHHHH
Confidence 55677 8999996654433333333345688999999888733221111111 12222 22457888877776555
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHH--cCCCeEEEeecCccc
Q 002979 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQ--FDGKKLILGIDDMDI 345 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~--~~~~~vil~Vdrld~ 345 (861)
.+.. . + ...+.++|+|+|...|..... .. ..+++ ..++++++++||+.+
T Consensus 158 ~~~~--------------------~-~-~~~~~~~~~g~~~~~~~~~~~---~~----~~~~~~~~~~~~~i~~~G~~~~ 208 (364)
T cd03814 158 ELRA--------------------R-G-FRRVRLWPRGVDTELFHPRRR---DE----ALRARLGPPDRPVLLYVGRLAP 208 (364)
T ss_pred HHhc--------------------c-C-CCceeecCCCccccccCcccc---cH----HHHHHhCCCCCeEEEEEecccc
Confidence 2221 0 0 124577899999887753211 11 11222 246789999999999
Q ss_pred ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHH
Q 002979 346 FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKS 425 (861)
Q Consensus 346 ~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~ 425 (861)
.||+...++|+..+.++ |+++ |+.+|. +++...++ +..+-+.+.+.++.+++.
T Consensus 209 ~k~~~~~i~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~-----------------~~~~~v~~~g~~~~~~~~ 261 (364)
T cd03814 209 EKNLEALLDADLPLRRR-PPVR----LVIVGD-----GPARARLE-----------------ARYPNVHFLGFLDGEELA 261 (364)
T ss_pred ccCHHHHHHHHHHhhhc-CCce----EEEEeC-----CchHHHHh-----------------ccCCcEEEEeccCHHHHH
Confidence 99999999999999877 7665 887773 23322222 011345667779999999
Q ss_pred HHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHH
Q 002979 426 AYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAV 502 (861)
Q Consensus 426 aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~ 502 (861)
.+|+.||++++||..||+|++++|||+| +.|+|+|..+|..+.+. .|++++|.|.+++
T Consensus 262 ~~~~~~d~~l~~s~~e~~~~~~lEa~a~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~~~~~~~~l 322 (364)
T cd03814 262 AAYASADVFVFPSRTETFGLVVLEAMAS-------------------GLPVVAPDAGGPADIVTDGENGLLVEPGDAEAF 322 (364)
T ss_pred HHHHhCCEEEECcccccCCcHHHHHHHc-------------------CCCEEEcCCCCchhhhcCCcceEEcCCCCHHHH
Confidence 9999999999999999999999999999 55699999999888884 4899999999999
Q ss_pred HHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002979 503 ADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 503 A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
+++|.++++. ++++..+.+..++++..+++..+++.+++-+
T Consensus 323 ~~~i~~l~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 363 (364)
T cd03814 323 AAALAALLAD-PELRRRMAARARAEAERRSWEAFLDNLLEAY 363 (364)
T ss_pred HHHHHHHHcC-HHHHHHHHHHHHHHHhhcCHHHHHHHHHHhh
Confidence 9999999974 4555566667777777889998888877543
No 81
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.79 E-value=2.8e-18 Score=179.64 Aligned_cols=190 Identities=17% Similarity=0.108 Sum_probs=118.5
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCc----
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKT---- 667 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~---- 667 (861)
+|++|+||||++ .+. ++++++++|+++ ++.|+.++++|||++..+..++..+. ..++|++||+.|..+..
T Consensus 1 li~~DlDGTLl~---~~~-~~~~~~~ai~~l-~~~G~~~vi~TgR~~~~~~~~~~~lg~~~~~I~~NGa~I~~~~~~~~~ 75 (225)
T TIGR02461 1 VIFTDLDGTLLP---PGY-EPGPAREALEEL-KDLGFPIVFVSSKTRAEQEYYREELGVEPPFIVENGGAIFIPRGYFPF 75 (225)
T ss_pred CEEEeCCCCCcC---CCC-CchHHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHHcCCCCcEEEcCCcEEEecCccccc
Confidence 589999999999 443 556799999999 78999999999999999999887664 34699999999988532
Q ss_pred -----------ceEEecCCccChHHHHHHHHHHHHHhhcCCCceEee---cc----ceeEeeeccC--Cc---cchhccH
Q 002979 668 -----------SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEI---KE----SALVWHHQDA--DP---DFGSCQA 724 (861)
Q Consensus 668 -----------~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~---k~----~~l~~~~~~~--d~---~~~~~~a 724 (861)
..+...++. +.++.+++...+..+-.++.. .+ ..+.....+. +. ++.....
T Consensus 76 ~~~~~~~~~~~~i~~~~l~~------~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ki~~~~~ 149 (225)
T TIGR02461 76 PVGAGREVGNYEVIELGKPV------AKIRAALKEAENEYGLKYYGNSTAEEVEKLTGLPRELAPLAKRREYSETIFLWS 149 (225)
T ss_pred cccccccCCCeEEEEcCCCH------HHHHHHHHHHHHhcCccchhcCCHHHHHHHHCcCHHHHHHHHhhhcCCcccCCC
Confidence 133333321 222333322211111000000 00 0000000000 00 0000111
Q ss_pred HHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCC--CCCeEEEEeCCcchHHHHHHccc
Q 002979 725 KELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGR--PPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 725 ~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi--~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+.+..+.+.+....+.+..+..++++. +++||+.|++.+++.+ ++ +.+++++|||+.||++||+.+|.
T Consensus 150 ~e~~~~~~~~~~~~~~~~~~s~~~~~i~-~~~sK~~al~~l~~~~---~~~~~~~~~i~~GD~~nD~~ml~~ag~ 220 (225)
T TIGR02461 150 REGWEAILVTARARGLKYTHGGRFYTVH-GGSDKGKAIKRLLDLY---KLRPGAIESVGLGDSENDFPMFEVVDL 220 (225)
T ss_pred HHHHHHHHHHHHHcCCcEEECCEEEEEC-CCCCHHHHHHHHHHHh---ccccCcccEEEEcCCHHHHHHHHhCCC
Confidence 2223333333333445566666777764 5999999999999998 65 66689999999999999999996
No 82
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=99.79 E-value=7.1e-18 Score=187.51 Aligned_cols=283 Identities=18% Similarity=0.180 Sum_probs=190.1
Q ss_pred HHHcCCCCCEEEEeCcc-cc---cHHHHHH-hhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhH
Q 002979 192 MEVINPDDDCVWVHDYH-LM---VLPTFLR-KRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyh-l~---llp~~lr-~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
+...+| |+|++|+.+ ++ ......+ .+..+.++.+.+|.+.|...... ...-...-+-.+|.|-+.+.+.+
T Consensus 72 ~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~---~~~~~~~~~~~~d~ii~~s~~~~ 146 (366)
T cd03822 72 IRLSGP--DVVVIQHEYGIFGGEAGLYLLLLLRGLGIPVVVTLHTVLLHEPRPG---DRALLRLLLRRADAVIVMSSELL 146 (366)
T ss_pred HhhcCC--CEEEEeeccccccchhhHHHHHHHhhcCCCEEEEEecCCccccchh---hhHHHHHHHhcCCEEEEeeHHHH
Confidence 344466 899998732 21 1111111 12367899999998622221111 11112223346899888875555
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccc
Q 002979 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 346 (861)
++++... ...++.++|+|++...+... . . . +......++++|+++||+.+.
T Consensus 147 ~~~~~~~---------------------~~~~~~~i~~~~~~~~~~~~-----~-~-~-~~~~~~~~~~~i~~~G~~~~~ 197 (366)
T cd03822 147 RALLLRA---------------------YPEKIAVIPHGVPDPPAEPP-----E-S-L-KALGGLDGRPVLLTFGLLRPY 197 (366)
T ss_pred HHHHhhc---------------------CCCcEEEeCCCCcCcccCCc-----h-h-h-HhhcCCCCCeEEEEEeeccCC
Confidence 5554310 02366788999997765321 1 1 1 111122567899999999999
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC-CCHHHHH
Q 002979 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP-VPRFEKS 425 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~-v~~~el~ 425 (861)
||+..+++|++.+.+++|+++ |+.+|... +.....+.+..+++.+ .+..+.+.+.+. ++.+++.
T Consensus 198 K~~~~ll~a~~~~~~~~~~~~----l~i~G~~~----~~~~~~~~~~~~~i~~-------~~~~~~v~~~~~~~~~~~~~ 262 (366)
T cd03822 198 KGLELLLEALPLLVAKHPDVR----LLVAGETH----PDLERYRGEAYALAER-------LGLADRVIFINRYLPDEELP 262 (366)
T ss_pred CCHHHHHHHHHHHHhhCCCeE----EEEeccCc----cchhhhhhhhHhHHHh-------cCCCCcEEEecCcCCHHHHH
Confidence 999999999999998888765 88777432 1111111110111222 233344555544 9999999
Q ss_pred HHHHhcccceeccccc--CCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCCCCHH
Q 002979 426 AYYAVAECCIVNAVRD--GMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWDID 500 (861)
Q Consensus 426 aly~~ADv~vvtS~~E--G~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~ 500 (861)
.+|+.||++++||..| |++++++|||+| +.|+|+|..+| .+.+ ..+++++|.|++
T Consensus 263 ~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~-------------------G~PvI~~~~~~-~~~i~~~~~g~~~~~~d~~ 322 (366)
T cd03822 263 ELFSAADVVVLPYRSADQTQSGVLAYAIGF-------------------GKPVISTPVGH-AEEVLDGGTGLLVPPGDPA 322 (366)
T ss_pred HHHhhcCEEEecccccccccchHHHHHHHc-------------------CCCEEecCCCC-hheeeeCCCcEEEcCCCHH
Confidence 9999999999999999 999999999999 45689999888 6666 358999999999
Q ss_pred HHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002979 501 AVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 501 ~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
++|++|..+++.+ +++..+.++.++++.++++..+++.+.+.+
T Consensus 323 ~~~~~l~~l~~~~-~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~ 365 (366)
T cd03822 323 ALAEAIRRLLADP-ELAQALRARAREYARAMSWERVAERYLRLL 365 (366)
T ss_pred HHHHHHHHHHcCh-HHHHHHHHHHHHHHhhCCHHHHHHHHHHHh
Confidence 9999999999844 445566677788888899999999887643
No 83
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=99.79 E-value=6.7e-18 Score=187.37 Aligned_cols=268 Identities=18% Similarity=0.241 Sum_probs=185.1
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchH----------HHHHHhhcCCEEee
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRD----------EILRGLLNCDLIGF 260 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~----------~il~~ll~~dligF 260 (861)
+.+..+| |+|++|+...+........+..+.++.+.+|.+|+.. ....+... -....+..+|.+-+
T Consensus 79 ~~~~~~~--Div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~d~i~~ 154 (374)
T cd03817 79 ILKELGP--DIVHTHTPFSLGLLGLRVARKLGIPVVATYHTMYEDY--THYVPLGRLLARAVVRRKLSRRFYNRCDAVIA 154 (374)
T ss_pred HHhhcCC--CEEEECCchhhhhHHHHHHHHcCCCEEEEecCCHHHH--HHHHhcccchhHHHHHHHHHHHHhhhCCEEEe
Confidence 3455676 8999998765544444444445789999999887632 22222111 11123345788877
Q ss_pred cChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEE
Q 002979 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLI 337 (861)
Q Consensus 261 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vi 337 (861)
.+......+.. . +....+.++|+|+|...+.... ... .++.+ .++++|
T Consensus 155 ~s~~~~~~~~~-----~----------------~~~~~~~vi~~~~~~~~~~~~~----~~~----~~~~~~~~~~~~~i 205 (374)
T cd03817 155 PSEKIADLLRE-----Y----------------GVKRPIEVIPTGIDLDRFEPVD----GDD----ERRKLGIPEDEPVL 205 (374)
T ss_pred ccHHHHHHHHh-----c----------------CCCCceEEcCCccchhccCccc----hhH----HHHhcCCCCCCeEE
Confidence 77654443332 0 1112477899999987764221 111 12222 467889
Q ss_pred EeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcC
Q 002979 338 LGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDR 417 (861)
Q Consensus 338 l~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~ 417 (861)
+++||+.+.||+..+++|++.+.++.|+++ |+.+|. ++...++ .+++.+. +..+.+.+.+
T Consensus 206 ~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~----l~i~G~-----~~~~~~~----~~~~~~~-------~~~~~v~~~g 265 (374)
T cd03817 206 LYVGRLAKEKNIDFLIRAFARLLKEEPDVK----LVIVGD-----GPEREEL----EELAREL-------GLADRVIFTG 265 (374)
T ss_pred EEEeeeecccCHHHHHHHHHHHHHhCCCeE----EEEEeC-----CchHHHH----HHHHHHc-------CCCCcEEEec
Confidence 999999999999999999999988767654 887773 2332333 3333222 2335667888
Q ss_pred CCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEe
Q 002979 418 PVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRV 494 (861)
Q Consensus 418 ~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~v 494 (861)
.++.+++..+|+.||++++||..||+|++.+|||+| +.|+|++..+|..+.+. .|+++
T Consensus 266 ~~~~~~~~~~~~~ad~~l~~s~~e~~~~~~~Ea~~~-------------------g~PvI~~~~~~~~~~i~~~~~g~~~ 326 (374)
T cd03817 266 FVPREELPDYYKAADLFVFASTTETQGLVLLEAMAA-------------------GLPVVAVDAPGLPDLVADGENGFLF 326 (374)
T ss_pred cCChHHHHHHHHHcCEEEecccccCcChHHHHHHHc-------------------CCcEEEeCCCChhhheecCceeEEe
Confidence 999999999999999999999999999999999999 45689999888877773 48999
Q ss_pred CCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC
Q 002979 495 NPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (861)
Q Consensus 495 nP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (861)
++.|. +++++|.+++++++.. +.+.++.++++..++
T Consensus 327 ~~~~~-~~~~~i~~l~~~~~~~-~~~~~~~~~~~~~~~ 362 (374)
T cd03817 327 PPGDE-ALAEALLRLLQDPELR-RRLSKNAEESAEKFS 362 (374)
T ss_pred CCCCH-HHHHHHHHHHhChHHH-HHHHHHHHHHHHHHH
Confidence 99888 9999999999866543 455566666666554
No 84
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=99.78 E-value=1.2e-17 Score=184.45 Aligned_cols=282 Identities=21% Similarity=0.208 Sum_probs=196.6
Q ss_pred HcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002979 194 VINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 194 ~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
..++ |+|++|......+...+..+....++.+..|.+++....... ..+......+-.+|.+-+.+....+.+....
T Consensus 91 ~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~-~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~~ 167 (377)
T cd03798 91 RFRP--DLIHAHFAYPDGFAAALLKRKLGIPLVVTLHGSDVNLLPRKR-LLRALLRRALRRADAVIAVSEALADELKALG 167 (377)
T ss_pred cCCC--CEEEEeccchHHHHHHHHHHhcCCCEEEEeecchhcccCchh-hHHHHHHHHHhcCCeEEeCCHHHHHHHHHhc
Confidence 4455 899999555544444444444557899999987764332211 2233344455678999998887666665411
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHH
Q 002979 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 353 (861)
....++.++|+|+|...+.... ...... .....+++.++++|++++.||+..++
T Consensus 168 --------------------~~~~~~~~i~~~~~~~~~~~~~-----~~~~~~-~~~~~~~~~i~~~g~~~~~k~~~~li 221 (377)
T cd03798 168 --------------------IDPEKVTVIPNGVDTERFSPAD-----RAEARK-LGLPEDKKVILFVGRLVPRKGIDYLI 221 (377)
T ss_pred --------------------CCCCceEEcCCCcCcccCCCcc-----hHHHHh-ccCCCCceEEEEeccCccccCHHHHH
Confidence 1123567889999988764211 111111 11225678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002979 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (861)
Q Consensus 354 ~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 433 (861)
+|++.+.+++|+++ |+.+|. ++....+++.++ . .+..+.+.+.+.++.+++..+|+.||+
T Consensus 222 ~~~~~~~~~~~~~~----l~i~g~-----~~~~~~~~~~~~----~-------~~~~~~v~~~g~~~~~~~~~~~~~ad~ 281 (377)
T cd03798 222 EALARLLKKRPDVH----LVIVGD-----GPLREALEALAA----E-------LGLEDRVTFLGAVPHEEVPAYYAAADV 281 (377)
T ss_pred HHHHHHHhcCCCeE----EEEEcC-----CcchHHHHHHHH----h-------cCCcceEEEeCCCCHHHHHHHHHhcCe
Confidence 99999988877654 777763 233333333322 1 334466778889999999999999999
Q ss_pred ceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002979 434 CIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 434 ~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL 510 (861)
++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|++++|.|+++++++|.+++
T Consensus 282 ~i~~~~~~~~~~~~~Ea~~~-------------------G~pvI~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~i~~~~ 342 (377)
T cd03798 282 FVLPSLREGFGLVLLEAMAC-------------------GLPVVATDVGGIPEIITDGENGLLVPPGDPEALAEAILRLL 342 (377)
T ss_pred eecchhhccCChHHHHHHhc-------------------CCCEEEecCCChHHHhcCCcceeEECCCCHHHHHHHHHHHh
Confidence 99999999999999999999 45689999888877773 358999999999999999999
Q ss_pred cCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002979 511 NMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
+.+.. ....+........+++..+++.+.+.++
T Consensus 343 ~~~~~--~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 375 (377)
T cd03798 343 ADPWL--RLGRAARRRVAERFSWENVAERLLELYR 375 (377)
T ss_pred cCcHH--HHhHHHHHHHHHHhhHHHHHHHHHHHHh
Confidence 87654 2222333344455788888887776554
No 85
>PRK10125 putative glycosyl transferase; Provisional
Probab=99.78 E-value=4.6e-18 Score=193.72 Aligned_cols=185 Identities=11% Similarity=0.019 Sum_probs=124.3
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecC-c-ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEE
Q 002979 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDD-M-DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQI 375 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdr-l-d~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi 375 (861)
++.++|+|||++.+... ++. ...+ ...++++|++|+| + ++.||+..+++|+.++ .+ ++.|+++
T Consensus 213 ~i~vI~NGid~~~~~~~---~~~----~~~~-~~~~~~~il~v~~~~~~~~Kg~~~li~A~~~l---~~----~~~L~iv 277 (405)
T PRK10125 213 RCRIINNGIDMATEAIL---AEL----PPVR-ETQGKPKIAVVAHDLRYDGKTDQQLVREMMAL---GD----KIELHTF 277 (405)
T ss_pred CEEEeCCCcCccccccc---ccc----cccc-cCCCCCEEEEEEeccccCCccHHHHHHHHHhC---CC----CeEEEEE
Confidence 67889999997543211 000 0001 1246788999999 4 4789999999999875 23 3558888
Q ss_pred ecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeec
Q 002979 376 VNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQ 455 (861)
Q Consensus 376 ~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~ 455 (861)
|... ... . ..+.++....+..++..+|+.||+||+||..||||++++|||||
T Consensus 278 G~g~-----~~~--~-------------------~~v~~~g~~~~~~~l~~~y~~aDvfV~pS~~Egfp~vilEAmA~-- 329 (405)
T PRK10125 278 GKFS-----PFT--A-------------------GNVVNHGFETDKRKLMSALNQMDALVFSSRVDNYPLILCEALSI-- 329 (405)
T ss_pred cCCC-----ccc--c-------------------cceEEecCcCCHHHHHHHHHhCCEEEECCccccCcCHHHHHHHc--
Confidence 8421 100 0 02333322236789999999999999999999999999999999
Q ss_pred CCCcccccccCCCCCCCCceEEeccCCCCcccCC--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhh-hccCC
Q 002979 456 GTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRY-VSTHD 532 (861)
Q Consensus 456 ~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~--~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~-v~~~~ 532 (861)
+.|+|+|+.+|+.+.+. +|++|+|.|++++|+++...+.. .+.....++.++. ...++
T Consensus 330 -----------------G~PVVat~~gG~~Eiv~~~~G~lv~~~d~~~La~~~~~~~~~--~~~~~~~~~~r~~~~~~fs 390 (405)
T PRK10125 330 -----------------GVPVIATHSDAAREVLQKSGGKTVSEEEVLQLAQLSKPEIAQ--AVFGTTLAEFSQRSRAAYS 390 (405)
T ss_pred -----------------CCCEEEeCCCChHHhEeCCcEEEECCCCHHHHHhccCHHHHH--HhhhhHHHHHHHHHHHhCC
Confidence 56699999999877773 59999999999999865433221 0000011223333 34588
Q ss_pred HhHHHHHHHHHH
Q 002979 533 VAYWARSFAQDL 544 (861)
Q Consensus 533 ~~~W~~~fl~~l 544 (861)
....++++++-.
T Consensus 391 ~~~~~~~y~~lY 402 (405)
T PRK10125 391 GQQMLEEYVNFY 402 (405)
T ss_pred HHHHHHHHHHHH
Confidence 888888776544
No 86
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=99.78 E-value=2.2e-17 Score=182.39 Aligned_cols=282 Identities=16% Similarity=0.165 Sum_probs=190.9
Q ss_pred HHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh-hcCCEEeecChHhHHHHH
Q 002979 192 MEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL-LNCDLIGFHTFDYARHFL 270 (861)
Q Consensus 192 ~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l-l~~dligF~t~~~~~~Fl 270 (861)
++..+| |+|++|+++......++.......++.+..|.-++... -........+.+-+ -.+|.+-..+......+.
T Consensus 76 ~~~~~~--div~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~ 152 (365)
T cd03807 76 IRRLRP--DVVHTWMYHADLYGGLAARLAGVPPVIWGIRHSDLDLG-KKSTRLVARLRRLLSSFIPLIVANSAAAAEYHQ 152 (365)
T ss_pred HHhhCC--CEEEeccccccHHHHHHHHhcCCCcEEEEecCCccccc-chhHhHHHHHHHHhccccCeEEeccHHHHHHHH
Confidence 344566 89999999977777766665467889999997665432 00001111122222 235666444443333332
Q ss_pred HHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccccc
Q 002979 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFK 347 (861)
Q Consensus 271 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~K 347 (861)
.. +. ...++.++|+|+|...+..... ....+++++ .++++++++||+++.|
T Consensus 153 ~~-----~~---------------~~~~~~vi~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~i~~~G~~~~~K 206 (365)
T cd03807 153 AI-----GY---------------PPKKIVVIPNGVDTERFSPDLD------ARARLREELGLPEDTFLIGIVARLHPQK 206 (365)
T ss_pred Hc-----CC---------------ChhheeEeCCCcCHHhcCCccc------chHHHHHhcCCCCCCeEEEEecccchhc
Confidence 20 11 1225667899999887642211 112233344 4678899999999999
Q ss_pred CHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHH
Q 002979 348 GISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAY 427 (861)
Q Consensus 348 Gi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~al 427 (861)
|+..+++|+..+.+++|+++ |+.+|... .....+.... .+ .+..+.+.+.+. .+++..+
T Consensus 207 ~~~~li~a~~~l~~~~~~~~----l~i~G~~~-----~~~~~~~~~~---~~-------~~~~~~v~~~g~--~~~~~~~ 265 (365)
T cd03807 207 DHATLLRAAALLLKKFPNAR----LLLVGDGP-----DRANLELLAL---KE-------LGLEDKVILLGE--RSDVPAL 265 (365)
T ss_pred CHHHHHHHHHHHHHhCCCeE----EEEecCCc-----chhHHHHHHH---Hh-------cCCCceEEEccc--cccHHHH
Confidence 99999999999998888765 88777432 2222222111 01 223345556554 5689999
Q ss_pred HHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-CceEeCCCCHHHHHHHH
Q 002979 428 YAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GAIRVNPWDIDAVADAM 506 (861)
Q Consensus 428 y~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~ai~vnP~d~~~~A~ai 506 (861)
|+.||++++||..||+|++++|||+| +.|+|+|+.+|..+.+. .|+++++.|+++++++|
T Consensus 266 ~~~adi~v~ps~~e~~~~~~~Ea~a~-------------------g~PvI~~~~~~~~e~~~~~g~~~~~~~~~~l~~~i 326 (365)
T cd03807 266 LNALDVFVLSSLSEGFPNVLLEAMAC-------------------GLPVVATDVGDNAELVGDTGFLVPPGDPEALAEAI 326 (365)
T ss_pred HHhCCEEEeCCccccCCcHHHHHHhc-------------------CCCEEEcCCCChHHHhhcCCEEeCCCCHHHHHHHH
Confidence 99999999999999999999999999 45689999998888875 48999999999999999
Q ss_pred HHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHHH
Q 002979 507 TLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQD 543 (861)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~~ 543 (861)
.++++.+ +++....++.++++.+ +++...++.+.+-
T Consensus 327 ~~l~~~~-~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~ 363 (365)
T cd03807 327 EALLADP-ALRQALGEAARERIEENFSIEAMVEAYEEL 363 (365)
T ss_pred HHHHhCh-HHHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 9999866 4555556666777654 7888888877653
No 87
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=99.78 E-value=2.1e-17 Score=184.00 Aligned_cols=278 Identities=18% Similarity=0.198 Sum_probs=195.2
Q ss_pred HcCCCCCEEEEeC-cccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc--------hHHH-HHHhhcCCEEeecCh
Q 002979 194 VINPDDDCVWVHD-YHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV--------RDEI-LRGLLNCDLIGFHTF 263 (861)
Q Consensus 194 ~~~p~~D~VwvhD-yhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--------r~~i-l~~ll~~dligF~t~ 263 (861)
..+| |+|++|. ..+..++....++..+.++.+.+|..||.......... ...+ -..+..+|.+-+.+.
T Consensus 97 ~~~~--D~v~~~~~~~~~~~~~~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~s~ 174 (394)
T cd03794 97 RRRP--DVIIATSPPLLIALAALLLARLKGAPFVLEVRDLWPESAVALGLLKNGSLLYRLLRKLERLIYRRADAIVVISP 174 (394)
T ss_pred ccCC--CEEEEcCChHHHHHHHHHHHHhcCCCEEEEehhhcchhHHHccCccccchHHHHHHHHHHHHHhcCCEEEEECH
Confidence 3455 8999998 44556666666666689999999998875433211111 1111 123456899998888
Q ss_pred HhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCc
Q 002979 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM 343 (861)
Q Consensus 264 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl 343 (861)
..++.+.. .+ ....++.++|+|++...+..... ...... .....++.+++++||+
T Consensus 175 ~~~~~~~~-----~~---------------~~~~~~~~i~~~~~~~~~~~~~~----~~~~~~-~~~~~~~~~i~~~G~~ 229 (394)
T cd03794 175 GMREYLVR-----RG---------------VPPEKISVIPNGVDLELFKPPPA----DESLRK-ELGLDDKFVVLYAGNI 229 (394)
T ss_pred HHHHHHHh-----cC---------------CCcCceEEcCCCCCHHHcCCccc----hhhhhh-ccCCCCcEEEEEecCc
Confidence 77776652 01 12235678999999877653211 111111 1122578899999999
Q ss_pred ccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHH
Q 002979 344 DIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFE 423 (861)
Q Consensus 344 d~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~e 423 (861)
...||+..+++|+.++.+. |+++ |+.+|. ++....+++.+. . .+...+ .+.+.++.++
T Consensus 230 ~~~k~~~~l~~~~~~l~~~-~~~~----l~i~G~-----~~~~~~~~~~~~----~-------~~~~~v-~~~g~~~~~~ 287 (394)
T cd03794 230 GRAQGLDTLLEAAALLKDR-PDIR----FLIVGD-----GPEKEELKELAK----A-------LGLDNV-TFLGRVPKEE 287 (394)
T ss_pred ccccCHHHHHHHHHHHhhc-CCeE----EEEeCC-----cccHHHHHHHHH----H-------cCCCcE-EEeCCCChHH
Confidence 9999999999999998776 6554 777773 333334433221 1 122234 4555899999
Q ss_pred HHHHHHhcccceecccccCC-----CCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeC
Q 002979 424 KSAYYAVAECCIVNAVRDGM-----NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVN 495 (861)
Q Consensus 424 l~aly~~ADv~vvtS~~EG~-----nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vn 495 (861)
+.++|+.||++++||..|++ +++.+|||+| |.|+|++..+|..+.+. .|++++
T Consensus 288 ~~~~~~~~di~i~~~~~~~~~~~~~p~~~~Ea~~~-------------------G~pvi~~~~~~~~~~~~~~~~g~~~~ 348 (394)
T cd03794 288 LPELLAAADVGLVPLKPGPAFEGVSPSKLFEYMAA-------------------GKPVLASVDGESAELVEEAGAGLVVP 348 (394)
T ss_pred HHHHHHhhCeeEEeccCcccccccCchHHHHHHHC-------------------CCcEEEecCCCchhhhccCCcceEeC
Confidence 99999999999999999976 5557999999 56699999999988883 489999
Q ss_pred CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHH
Q 002979 496 PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSF 540 (861)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~f 540 (861)
+.|+++++++|.++++ +++++..+.++.++++. .+++..+++++
T Consensus 349 ~~~~~~l~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 393 (394)
T cd03794 349 PGDPEALAAAILELLD-DPEERAEMGENGRRYVEEKFSREKLAERL 393 (394)
T ss_pred CCCHHHHHHHHHHHHh-ChHHHHHHHHHHHHHHHHhhcHHHHHHhc
Confidence 9999999999999995 45666666777777776 68888888765
No 88
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=99.77 E-value=8.1e-17 Score=184.04 Aligned_cols=352 Identities=14% Similarity=0.161 Sum_probs=201.4
Q ss_pred ccccccccccCCCCCCCCCCccChHhHHHHHH--HHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEE
Q 002979 151 KQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVS--ANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFF 228 (861)
Q Consensus 151 ~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~--vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~f 228 (861)
+.-||-.|+--.+ .....+++..-=.|.. +=..|+..+.. . .-|+++.||.+.-....+||++.++++..|+
T Consensus 105 ~~~lW~~~~i~s~---~~~~d~nea~~fgy~~~~~i~~~~~~~~~--~-~~dViH~HeWm~g~a~~~lK~~~~~VptVfT 178 (590)
T cd03793 105 KGELWELCGIGSP---EGDRETNDAIIFGFLVAWFLGEFAEQFDD--E-PAVVAHFHEWQAGVGLPLLRKRKVDVSTIFT 178 (590)
T ss_pred HHHHHHHcCCCCC---CCCCcchHHHHHHHHHHHHHHHHHhhccC--C-CCeEEEEcchhHhHHHHHHHHhCCCCCEEEE
Confidence 3458999886533 2223454443333421 12233332111 2 2489999999999999999988899999999
Q ss_pred EecCCCChHHHhcCCchHHHHHHhhcCCEEeecCh--------------HhHHHHHHHH-----HHHhCCccccCCCeee
Q 002979 229 LHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTF--------------DYARHFLSCC-----SRMLGLDYESKRGHIG 289 (861)
Q Consensus 229 lH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~--------------~~~~~Fl~~~-----~r~lg~~~~~~~~~~~ 289 (861)
.|.. +.-|.|- +.+ ..|++. -+.++.++.. ++++.++....+. .
T Consensus 179 tHAT----~~GR~l~----------~g~-~~~y~~l~~~~~d~eA~~~~I~~r~~iE~~aa~~Ad~fttVS~it~~E--~ 241 (590)
T cd03793 179 THAT----LLGRYLC----------AGN-VDFYNNLDYFDVDKEAGKRGIYHRYCIERAAAHCAHVFTTVSEITAYE--A 241 (590)
T ss_pred eccc----ccccccc----------cCC-cccchhhhhcchhhhhhcccchHHHHHHHHHHhhCCEEEECChHHHHH--H
Confidence 9943 2222210 111 111110 0223333211 1111111100000 0
Q ss_pred EEecCeEEEEEEecccCCchHHHHhhCCc----hhHHHHH-----HHHHHc---CCCeEEEe-ecCccc-ccCHHHHHHH
Q 002979 290 LDYFGRTVYIKILPVGVHMGRLESVLNLP----ATATKIK-----EIEKQF---DGKKLILG-IDDMDI-FKGISLKLLA 355 (861)
Q Consensus 290 ~~~~gr~~~i~v~p~GId~~~~~~~~~~~----~~~~~~~-----~l~~~~---~~~~vil~-Vdrld~-~KGi~~~l~A 355 (861)
...+++...+ |+|+|||++.|.....-. ...+++. .++.+| .+++++++ +||+++ .||++.+|+|
T Consensus 242 ~~Ll~~~pd~-ViPNGid~~~f~~~~e~~~~~~~~k~ki~~f~~~~~~~~~~~~~d~tli~f~~GR~e~~nKGiDvlIeA 320 (590)
T cd03793 242 EHLLKRKPDV-VLPNGLNVKKFSALHEFQNLHAQSKEKINEFVRGHFYGHYDFDLDKTLYFFTAGRYEFSNKGADMFLEA 320 (590)
T ss_pred HHHhCCCCCE-EeCCCcchhhcccchhhhhhhHHhhhhhhHHHHHHHhhhcCCCCCCeEEEEEeeccccccCCHHHHHHH
Confidence 1123444333 899999999986432100 1111222 235544 36788888 899999 9999999999
Q ss_pred HHHHHHhCCC-CCCcEEEEEEecCCCCCh---------hHHHHHHHHHHHHHHHHhhc---------c------------
Q 002979 356 MEQLLQQHPG-MRGKVVLVQIVNPARGSG---------KDVQEAKKETYLTAKRINEV---------Y------------ 404 (861)
Q Consensus 356 f~~ll~~~P~-~~~~vvLvqi~~p~r~~~---------~~~~~~~~~v~~l~~~IN~~---------~------------ 404 (861)
+.++-..-.. -.++.|+..+..|+...+ .-..+++..+.++..+|..+ .
T Consensus 321 l~rLn~~l~~~~~~~tVvafii~p~~~~~~~~~~l~g~~~~~~l~~~~~~i~~~i~~~~~~~~l~~~~~~~~~~~~~~~~ 400 (590)
T cd03793 321 LARLNYLLKVEGSDTTVVAFFIMPAKTNNFNVESLKGQAVRKQLRDTVNSVKEKIGKRLFEAALKGKLPDLEELLDKEDK 400 (590)
T ss_pred HHHHHHHHHhcCCCCeEEEEEEecCccCCcCHHhhcchHHHHHHHHHHHHHHHHhhhhhhhHhhccCCCChhhhcchhhH
Confidence 9987552111 112233334445554332 22344556666665666555 1
Q ss_pred -----------------------------------------CC-CCcccEEEEcCCCC------HHHHHHHHHhccccee
Q 002979 405 -----------------------------------------GS-PNYEPVVLIDRPVP------RFEKSAYYAVAECCIV 436 (861)
Q Consensus 405 -----------------------------------------~~-~~~~pvv~~~~~v~------~~el~aly~~ADv~vv 436 (861)
.. .+...||+....++ ..+...+|+.||+||+
T Consensus 401 ~~~kr~~~~~~~~~~~p~~tH~~~~~~~D~il~~~r~~~l~N~~~drVkvif~P~~L~~~~~~~g~~y~E~~~g~dl~v~ 480 (590)
T cd03793 401 VMLKRRIFALQRHSLPPVVTHNMVDDANDPILNHIRRIQLFNSPEDRVKVVFHPEFLSSTNPLLGLDYEEFVRGCHLGVF 480 (590)
T ss_pred HHHHHHHHhhccCCCCCeeeecCCcCccCHHHHHHHHhcCcCCCCCeEEEEEcccccCCCCCcCCcchHHHhhhceEEEe
Confidence 00 12223444333222 3357889999999999
Q ss_pred cccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc----ccCC----CceEeC-------CCCHHH
Q 002979 437 NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS----PSLS----GAIRVN-------PWDIDA 501 (861)
Q Consensus 437 tS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~----~~l~----~ai~vn-------P~d~~~ 501 (861)
||.+||||++++||||| +.|+|+|..+|.. +.+. .|+.|. +.++++
T Consensus 481 PS~yE~fG~~~lEAma~-------------------G~PvI~t~~~gf~~~v~E~v~~~~~~gi~V~~r~~~~~~e~v~~ 541 (590)
T cd03793 481 PSYYEPWGYTPAECTVM-------------------GIPSITTNLSGFGCFMEEHIEDPESYGIYIVDRRFKSPDESVQQ 541 (590)
T ss_pred ccccCCCCcHHHHHHHc-------------------CCCEEEccCcchhhhhHHHhccCCCceEEEecCCccchHHHHHH
Confidence 99999999999999999 5669999999984 3332 378887 566788
Q ss_pred HHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002979 502 VADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 502 ~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
+|++|.+.++++..++........+.....++.+-+..+++.-.
T Consensus 542 La~~m~~~~~~~~r~~~~~r~~~~r~s~~f~W~~~~~~Y~~A~~ 585 (590)
T cd03793 542 LTQYMYEFCQLSRRQRIIQRNRTERLSDLLDWRNLGRYYRKARQ 585 (590)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999998876544443333333355555676666665555433
No 89
>PHA01633 putative glycosyl transferase group 1
Probab=99.77 E-value=3.8e-18 Score=187.21 Aligned_cols=193 Identities=16% Similarity=0.190 Sum_probs=140.0
Q ss_pred ecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCC
Q 002979 302 LPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARG 381 (861)
Q Consensus 302 ~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~ 381 (861)
+|.|||.+.|.+... ...+.++.+...+.+..++++|+|+++.||+..+++|++++.+++|++..++.|+.+|.
T Consensus 118 I~~GVD~~~f~p~~~--~~~~~r~~~~~~~~~~~~i~~vGRl~~~KG~~~LI~A~~~L~~~~p~~~~~i~l~ivG~---- 191 (335)
T PHA01633 118 VFHGINFKIVENAEK--LVPQLKQKLDKDFPDTIKFGIVSGLTKRKNMDLMLQVFNELNTKYPDIAKKIHFFVISH---- 191 (335)
T ss_pred eeCCCChhhcCccch--hhHHHHHHhCcCCCCCeEEEEEeCCccccCHHHHHHHHHHHHHhCCCccccEEEEEEcH----
Confidence 467999998853210 01111222222234677899999999999999999999999999999876777876651
Q ss_pred ChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEc---CCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCC
Q 002979 382 SGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLID---RPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTP 458 (861)
Q Consensus 382 ~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~---~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~ 458 (861)
. .+ . + .+....+.+. +.++.+++.++|+.||+||+||..||||++++|||+|
T Consensus 192 --~---~~----~----~-------l~l~~~V~f~g~~G~~~~~dl~~~y~~aDifV~PS~~EgfGlvlLEAMA~----- 246 (335)
T PHA01633 192 --K---QF----T----Q-------LEVPANVHFVAEFGHNSREYIFAFYGAMDFTIVPSGTEGFGMPVLESMAM----- 246 (335)
T ss_pred --H---HH----H----H-------cCCCCcEEEEecCCCCCHHHHHHHHHhCCEEEECCccccCCHHHHHHHHc-----
Confidence 1 11 1 1 1112223343 6778999999999999999999999999999999999
Q ss_pred cccccccCCCCCCCCceEEeccCCCCcccCCC---------------------ceEeCCCCHHHHHHHHHHHhcCCHHHH
Q 002979 459 IMDEALGRERDSPHTSMLVVSEFIGCSPSLSG---------------------AIRVNPWDIDAVADAMTLAINMRDSEK 517 (861)
Q Consensus 459 ~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---------------------ai~vnP~d~~~~A~ai~~aL~m~~~e~ 517 (861)
|.|+|+|..+|..+..++ ++.++++|++++|++|.+++.+++.+.
T Consensus 247 --------------G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~~~~~~~~g~g~~~~~~d~~~la~ai~~~~~~~~~~~ 312 (335)
T PHA01633 247 --------------GTPVIHQLMPPLDEFTSWQWNLLIKSSKVEEYYDKEHGQKWKIHKFQIEDMANAIILAFELQDREE 312 (335)
T ss_pred --------------CCCEEEccCCCceeecCCccceeeCCCCHHHhcCcccCceeeecCCCHHHHHHHHHHHHhccChhh
Confidence 456888888776664321 457788999999999999988764333
Q ss_pred HHHHHHhhhhhccCCHhHHHHHHH
Q 002979 518 QLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 518 ~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
|..+.++..+++++..-.++|+
T Consensus 313 --~~~~~~~~a~~f~~~~~~~~~~ 334 (335)
T PHA01633 313 --RSMKLKELAKKYDIRNLYTRFL 334 (335)
T ss_pred --hhHHHHHHHHhcCHHHHHHHhh
Confidence 3445567778888887777664
No 90
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=99.77 E-value=1.8e-17 Score=181.46 Aligned_cols=264 Identities=14% Similarity=0.100 Sum_probs=180.7
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002979 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+..+| |+|++|+.+...+...+..+. .++....|..++....... +.......+-.+|.+-+.+......+.
T Consensus 80 ~~~~~--d~i~~~~~~~~~~~~~~~~~~--~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~d~ii~~s~~~~~~~~-- 151 (348)
T cd03820 80 KNNKP--DVVISFLTSLLTFLASLGLKI--VKLIVSEHNSPDAYKKRLR--RLLLRRLLYRRADAVVVLTEEDRALYY-- 151 (348)
T ss_pred cccCC--CEEEEcCchHHHHHHHHhhcc--ccEEEecCCCccchhhhhH--HHHHHHHHHhcCCEEEEeCHHHHHHhh--
Confidence 33566 999999988222222222221 4788888977654322110 111123334567888777765441110
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.....++.++|+|++...+... ...+++.++++||+.+.||+..+
T Consensus 152 --------------------~~~~~~~~vi~~~~~~~~~~~~---------------~~~~~~~i~~~g~~~~~K~~~~l 196 (348)
T cd03820 152 --------------------KKFNKNVVVIPNPLPFPPEEPS---------------SDLKSKRILAVGRLVPQKGFDLL 196 (348)
T ss_pred --------------------ccCCCCeEEecCCcChhhcccc---------------CCCCCcEEEEEEeeccccCHHHH
Confidence 0112356778999998765311 12467899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002979 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|++++.+.+|+++ |+.+|. +++...+++ ++.+ .+..+.+.+.+. .+++..+|+.||
T Consensus 197 ~~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~----~~~~-------~~~~~~v~~~g~--~~~~~~~~~~ad 254 (348)
T cd03820 197 IEAWAKIAKKHPDWK----LRIVGD-----GPEREALEA----LIKE-------LGLEDRVILLGF--TKNIEEYYAKAS 254 (348)
T ss_pred HHHHHHHHhcCCCeE----EEEEeC-----CCCHHHHHH----HHHH-------cCCCCeEEEcCC--cchHHHHHHhCC
Confidence 999999988888765 777773 233333333 2222 233456667765 789999999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C---CceEeCCCCHHHHHHHHHH
Q 002979 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S---GAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~---~ai~vnP~d~~~~A~ai~~ 508 (861)
++++||..||||++++|||+| |.|+|+|...|..+.+ . .|+++++.|+++++++|.+
T Consensus 255 ~~i~ps~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~i~~ 315 (348)
T cd03820 255 IFVLTSRFEGFPMVLLEAMAF-------------------GLPVISFDCPTGPSEIIEDGVNGLLVPNGDVEALAEALLR 315 (348)
T ss_pred EEEeCccccccCHHHHHHHHc-------------------CCCEEEecCCCchHhhhccCcceEEeCCCCHHHHHHHHHH
Confidence 999999999999999999999 4568889876655544 2 5799999999999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002979 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+++.+ +.++...++....+..+++..++++|.
T Consensus 316 ll~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 347 (348)
T cd03820 316 LMEDE-ELRKRMGANARESAERFSIENIIKQWE 347 (348)
T ss_pred HHcCH-HHHHHHHHHHHHHHHHhCHHHHHHHhc
Confidence 99844 444444555577778888888887764
No 91
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=99.76 E-value=1.9e-17 Score=186.44 Aligned_cols=280 Identities=15% Similarity=0.080 Sum_probs=188.0
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCC---ChHHHhcC-CchHHHHHHhhcC
Q 002979 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP---SSEIYRTL-PVRDEILRGLLNC 255 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP---~~e~f~~l-p~r~~il~~ll~~ 255 (861)
..+.-+.|-+++.. .. ..|+|.+|-.+.... .+.......+...++|...- .......+ ...+.++..+-.+
T Consensus 83 ~~~l~~~~l~~l~~-~~-~~diii~~~~~~~~~--~~~~~~~~~~~i~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (372)
T cd04949 83 EEELFAFFLDELNK-DT-KPDVFILDRPTLDGQ--ALLNMKKAAKVVVVLHSNHVSDNNDPVHSLINNFYEYVFENLDKV 158 (372)
T ss_pred HHHHHHHHHHHHhc-CC-CCCEEEECCccccch--hHHhccCCceEEEEEChHHhCCcccccccccchhhHHHHhChhhC
Confidence 33444445555443 22 348999987776655 23333445677788885421 11110001 1224555666678
Q ss_pred CEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCe
Q 002979 256 DLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKK 335 (861)
Q Consensus 256 dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 335 (861)
|.|.+.+..-.+.+.... + ....+.++|+|++...+.... .....+.
T Consensus 159 d~ii~~s~~~~~~l~~~~----~----------------~~~~v~~ip~g~~~~~~~~~~-------------~~~~~~~ 205 (372)
T cd04949 159 DGVIVATEQQKQDLQKQF----G----------------NYNPIYTIPVGSIDPLKLPAQ-------------FKQRKPH 205 (372)
T ss_pred CEEEEccHHHHHHHHHHh----C----------------CCCceEEEcccccChhhcccc-------------hhhcCCC
Confidence 988888876666554311 1 011267899999987764210 0113567
Q ss_pred EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEE
Q 002979 336 LILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415 (861)
Q Consensus 336 vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~ 415 (861)
.++++||+.+.||+..+|+|+.++.+++|+++ |+.+|.. ++...++..+ .+ .+....+.+
T Consensus 206 ~i~~vgrl~~~K~~~~li~a~~~l~~~~~~~~----l~i~G~g-----~~~~~~~~~~----~~-------~~~~~~v~~ 265 (372)
T cd04949 206 KIITVARLAPEKQLDQLIKAFAKVVKQVPDAT----LDIYGYG-----DEEEKLKELI----EE-------LGLEDYVFL 265 (372)
T ss_pred eEEEEEccCcccCHHHHHHHHHHHHHhCCCcE----EEEEEeC-----chHHHHHHHH----HH-------cCCcceEEE
Confidence 89999999999999999999999999999876 8877743 2323333332 22 223345667
Q ss_pred cCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCC-CCcccC---CCc
Q 002979 416 DRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-GCSPSL---SGA 491 (861)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-G~~~~l---~~a 491 (861)
.| ..+++.++|+.||++|+||..||||++.+|||+| |.|+|+++.. |..+.+ ..|
T Consensus 266 ~g--~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~-------------------G~PvI~~~~~~g~~~~v~~~~~G 324 (372)
T cd04949 266 KG--YTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSH-------------------GLPVISYDVNYGPSEIIEDGENG 324 (372)
T ss_pred cC--CCCCHHHHHhhhhEEEecccccccChHHHHHHhC-------------------CCCEEEecCCCCcHHHcccCCCc
Confidence 66 3568999999999999999999999999999999 4568888876 666666 248
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHH
Q 002979 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWAR 538 (861)
Q Consensus 492 i~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~ 538 (861)
++++|.|++++|++|..+++.+ +.+....++.++...+++...+++
T Consensus 325 ~lv~~~d~~~la~~i~~ll~~~-~~~~~~~~~a~~~~~~~s~~~~~~ 370 (372)
T cd04949 325 YLVPKGDIEALAEAIIELLNDP-KLLQKFSEAAYENAERYSEENVWE 370 (372)
T ss_pred eEeCCCcHHHHHHHHHHHHcCH-HHHHHHHHHHHHHHHHhhHHHHHh
Confidence 9999999999999999999854 445555666666666666666554
No 92
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=99.76 E-value=5.1e-17 Score=179.69 Aligned_cols=262 Identities=17% Similarity=0.180 Sum_probs=179.1
Q ss_pred HHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHH
Q 002979 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 189 ~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~ 268 (861)
.++++..+| |+|++|.+..+.++.+...+...+++.+.+|-.++... ....+.. ..|.+-..+....+.
T Consensus 89 ~~~~~~~~~--dii~~~~~~~~~~~~~~~~~~~~~~~i~~~hd~~~~~~------~~~~~~~---~~d~ii~~s~~~~~~ 157 (359)
T cd03823 89 ARLLEDFRP--DVVHFHHLQGLGVSILRAARDRGIPIVLTLHDYWLICP------RQGLFKK---GGDAVIAPSRFLLDR 157 (359)
T ss_pred HHHHHHcCC--CEEEECCccchHHHHHHHHHhcCCCEEEEEeeeeeecc------hhhhhcc---CCCEEEEeCHHHHHH
Confidence 344555676 89999988655444433333446899999997654321 1111111 127777777655555
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccC
Q 002979 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KG 348 (861)
|.. .+ ....++.++|+|+|...+..... ....++.+++++||+.+.||
T Consensus 158 ~~~-----~~---------------~~~~~~~vi~n~~~~~~~~~~~~------------~~~~~~~~i~~~G~~~~~k~ 205 (359)
T cd03823 158 YVA-----NG---------------LFAEKISVIRNGIDLDRAKRPRR------------APPGGRLRFGFIGQLTPHKG 205 (359)
T ss_pred HHH-----cC---------------CCccceEEecCCcChhhcccccc------------CCCCCceEEEEEecCccccC
Confidence 543 01 01236788999999987642110 11246788999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+..+++|+..+.+ ++++ |+.+|... .....+... +..+.+.+.+.++.+++..+|
T Consensus 206 ~~~li~~~~~l~~--~~~~----l~i~G~~~-----~~~~~~~~~--------------~~~~~v~~~g~~~~~~~~~~~ 260 (359)
T cd03823 206 VDLLLEAFKRLPR--GDIE----LVIVGNGL-----ELEEESYEL--------------EGDPRVEFLGAYPQEEIDDFY 260 (359)
T ss_pred HHHHHHHHHHHHh--cCcE----EEEEcCch-----hhhHHHHhh--------------cCCCeEEEeCCCCHHHHHHHH
Confidence 9999999998876 5544 88887432 211111111 122456788899999999999
Q ss_pred Hhcccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHH
Q 002979 429 AVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVAD 504 (861)
Q Consensus 429 ~~ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ 504 (861)
+.||++++||. .||++++++|||+| +.|+|+|+.+|..+.+. .|++++|.|++++++
T Consensus 261 ~~ad~~i~ps~~~e~~~~~~~Ea~a~-------------------G~Pvi~~~~~~~~e~i~~~~~g~~~~~~d~~~l~~ 321 (359)
T cd03823 261 AEIDVLVVPSIWPENFPLVIREALAA-------------------GVPVIASDIGGMAELVRDGVNGLLFPPGDAEDLAA 321 (359)
T ss_pred HhCCEEEEcCcccCCCChHHHHHHHC-------------------CCCEEECCCCCHHHHhcCCCcEEEECCCCHHHHHH
Confidence 99999999997 79999999999999 45699999988888773 489999999999999
Q ss_pred HHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002979 505 AMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 505 ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+|.++++ .++.++...+..++.+.. ..++++++
T Consensus 322 ~i~~l~~-~~~~~~~~~~~~~~~~~~---~~~~~~~~ 354 (359)
T cd03823 322 ALERLID-DPDLLERLRAGIEPPRSI---EDQAEEYL 354 (359)
T ss_pred HHHHHHh-ChHHHHHHHHhHHHhhhH---HHHHHHHH
Confidence 9999998 444455555555554433 44444443
No 93
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.76 E-value=1.9e-17 Score=174.53 Aligned_cols=191 Identities=12% Similarity=0.042 Sum_probs=129.7
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc-CCceEecCcEEEEeCCcce
Q 002979 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE-MLGIAAEHGYFIRWNKTSE 669 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~-~lgliaenG~~i~~~~~~~ 669 (861)
+|+||+||||||++ ++..+++.++++|++| ++.|+.|+++|||+...+..+.+.+. ..++|++||+.|..+....
T Consensus 1 ~KLIftDLDGTLLd---~~~~~~~~a~~aL~~L-k~~GI~vVlaTGRt~~ev~~l~~~Lgl~~p~I~eNGA~I~~p~~~~ 76 (302)
T PRK12702 1 MRLVLSSLDGSLLD---LEFNSYGAARQALAAL-ERRSIPLVLYSLRTRAQLEHLCRQLRLEHPFICEDGSAIYVPEHYF 76 (302)
T ss_pred CcEEEEeCCCCCcC---CCCcCCHHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHhCCCCeEEEeCCcEEEEccccc
Confidence 48999999999999 6777889999999999 79999999999999999999987765 3369999999999764411
Q ss_pred ---------------EEecCCccChHHHHHHHHHHHHHhhcCCC--------------ceE------eeccceeEeeecc
Q 002979 670 ---------------WETNHLGADLEWKKIVEPVMRSYTEATDG--------------SNI------EIKESALVWHHQD 714 (861)
Q Consensus 670 ---------------~~~~~~~~~~~w~~~v~~i~~~y~~~~~g--------------s~i------e~k~~~l~~~~~~ 714 (861)
|.......-..|+.....+-..+.....| .-. ..++++-.+.+..
T Consensus 77 ~~~~~~~~~~~~~~~~~~~lg~~y~~ir~~L~~l~~~~~~~f~gF~d~t~~ei~~~TGL~~~~A~~A~~Re~SEp~~w~~ 156 (302)
T PRK12702 77 PAGILDEQWQHRPPYYVCALGLPYPCLRHILQQVRQDSHLDLIGFGDWTASELAAATGIPLEEAERAQKREYSEIFSYSG 156 (302)
T ss_pred cccccccccccCCCceEEecCCCHHHHHHHHHHHHHHhCCCceehhhCCHHHHHHHhCcCHHHHHHHHhccCCcceEecC
Confidence 00000001123444444443332211111 000 1122222222222
Q ss_pred CCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEec------------------C---CCCHHHHHHHHHHHhhcCC
Q 002979 715 ADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKP------------------Q---GVSKGLVAEKVLVRMFNGG 773 (861)
Q Consensus 715 ~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p------------------~---gvsKg~al~~ll~~l~~~g 773 (861)
.+ ..+ .+.+...++.+..|..++.+.. . +++||.|+++|.+.+....
T Consensus 157 ~~--------~~~----~~~~~~~g~~~~~GgRf~H~l~~~~~~~~~~~~~~~~~~~~~~~~~dKg~A~~~L~~~y~~~~ 224 (302)
T PRK12702 157 DP--------ARL----REAFAQQEANLTQHLLRLHQLHFSDLPQWYLTGWMQPTLAAEPNSLPGEQAVQLLLDCYQRHL 224 (302)
T ss_pred CH--------HHH----HHHHHHcCCeEEecCceEEecccccccccccccccccccccccCCCCHHHHHHHHHHHHHhcc
Confidence 11 112 4455566777888888888876 5 8999999999999984332
Q ss_pred CCCCeEEEEeCCcchHHHHHHcccc
Q 002979 774 RPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
..=.++++|||.||++||+++...
T Consensus 225 -~~~~tiaLGDspND~~mLe~~D~~ 248 (302)
T PRK12702 225 -GPIKALGIGCSPPDLAFLRWSEQK 248 (302)
T ss_pred -CCceEEEecCChhhHHHHHhCCee
Confidence 234899999999999999999874
No 94
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=99.75 E-value=2.9e-17 Score=184.61 Aligned_cols=240 Identities=13% Similarity=0.112 Sum_probs=165.4
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhc-CCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHH
Q 002979 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRF-NRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~-~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~ 268 (861)
++++..+| |+||+|++....+..++++.. ...++..+.|..++....+. ...+..+|.+-..+..-.+.
T Consensus 78 ~~l~~~~~--Dii~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~--------~~~~~~~d~~i~~S~~~~~~ 147 (359)
T PRK09922 78 KWLKETQP--DIVICIDVISCLYANKARKKSGKQFKIFSWPHFSLDHKKHAE--------CKKITCADYHLAISSGIKEQ 147 (359)
T ss_pred HHHHhcCC--CEEEEcCHHHHHHHHHHHHHhCCCCeEEEEecCcccccchhh--------hhhhhcCCEEEEcCHHHHHH
Confidence 45566677 899999987776666666543 23556667776554432221 11235688887777654444
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcc--cc
Q 002979 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMD--IF 346 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld--~~ 346 (861)
+.. .|+. ..++.++|+|||.+.+... .+ ....+++++++||+. ..
T Consensus 148 ~~~-----~~~~---------------~~ki~vi~N~id~~~~~~~--~~-----------~~~~~~~i~~~Grl~~~~~ 194 (359)
T PRK09922 148 MMA-----RGIS---------------AQRISVIYNPVEIKTIIIP--PP-----------ERDKPAVFLYVGRLKFEGQ 194 (359)
T ss_pred HHH-----cCCC---------------HHHEEEEcCCCCHHHccCC--Cc-----------ccCCCcEEEEEEEEecccC
Confidence 432 1211 1245678999997654311 00 013467899999996 45
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC--CHHHH
Q 002979 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV--PRFEK 424 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v--~~~el 424 (861)
||+..+++|+.++. + ++.|+.+|. |++.+++++.+ ++. +....+.|.|.+ +.+++
T Consensus 195 k~~~~l~~a~~~~~---~----~~~l~ivG~-----g~~~~~l~~~~----~~~-------~l~~~v~f~G~~~~~~~~~ 251 (359)
T PRK09922 195 KNVKELFDGLSQTT---G----EWQLHIIGD-----GSDFEKCKAYS----REL-------GIEQRIIWHGWQSQPWEVV 251 (359)
T ss_pred cCHHHHHHHHHhhC---C----CeEEEEEeC-----CccHHHHHHHH----HHc-------CCCCeEEEecccCCcHHHH
Confidence 99999999998762 2 356888883 44444444433 332 233456677755 55899
Q ss_pred HHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEecc-CCCCcccCC---CceEeCCCCHH
Q 002979 425 SAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE-FIGCSPSLS---GAIRVNPWDID 500 (861)
Q Consensus 425 ~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se-~~G~~~~l~---~ai~vnP~d~~ 500 (861)
..+|+.||++|+||..||||++++||||| +.|+|+|+ .+|+.+.+. .|++|+|.|++
T Consensus 252 ~~~~~~~d~~v~~s~~Egf~~~~lEAma~-------------------G~Pvv~s~~~~g~~eiv~~~~~G~lv~~~d~~ 312 (359)
T PRK09922 252 QQKIKNVSALLLTSKFEGFPMTLLEAMSY-------------------GIPCISSDCMSGPRDIIKPGLNGELYTPGNID 312 (359)
T ss_pred HHHHhcCcEEEECCcccCcChHHHHHHHc-------------------CCCEEEeCCCCChHHHccCCCceEEECCCCHH
Confidence 99999999999999999999999999999 45699999 888877773 38999999999
Q ss_pred HHHHHHHHHhcCCH
Q 002979 501 AVADAMTLAINMRD 514 (861)
Q Consensus 501 ~~A~ai~~aL~m~~ 514 (861)
++|++|.+.++.++
T Consensus 313 ~la~~i~~l~~~~~ 326 (359)
T PRK09922 313 EFVGKLNKVISGEV 326 (359)
T ss_pred HHHHHHHHHHhCcc
Confidence 99999999998664
No 95
>PLN02846 digalactosyldiacylglycerol synthase
Probab=99.75 E-value=3e-17 Score=186.88 Aligned_cols=268 Identities=13% Similarity=0.077 Sum_probs=168.1
Q ss_pred HHHHcCCCCCEEEEeCcccccH---HHHHHhhcCCCeEEEEEecCCCChHHHhcCC--chHHHHHHhhcCCEEeecChHh
Q 002979 191 VMEVINPDDDCVWVHDYHLMVL---PTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP--VRDEILRGLLNCDLIGFHTFDY 265 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~ll---p~~lr~~~~~~~i~~flH~PfP~~e~f~~lp--~r~~il~~ll~~dligF~t~~~ 265 (861)
+++..+| |+|++|+.-.+.. ...+++++ .. +..+.|+.|+. +++... ....++...+ ..+
T Consensus 111 ~l~~~~p--DVIHv~tP~~LG~~~~g~~~~~k~-~~-vV~tyHT~y~~--Y~~~~~~g~~~~~l~~~~---------~~~ 175 (462)
T PLN02846 111 TIPDEEA--DIAVLEEPEHLTWYHHGKRWKTKF-RL-VIGIVHTNYLE--YVKREKNGRVKAFLLKYI---------NSW 175 (462)
T ss_pred HHHhcCC--CEEEEcCchhhhhHHHHHHHHhcC-Cc-EEEEECCChHH--HHHHhccchHHHHHHHHH---------HHH
Confidence 3455677 9999999877766 34455555 34 77799998753 322111 1112222111 112
Q ss_pred HHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CC--CeEEEeec
Q 002979 266 ARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DG--KKLILGID 341 (861)
Q Consensus 266 ~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~--~~vil~Vd 341 (861)
++.| .|+.++.++... .+ +... +...+.|||.+.|..... . +++.+ .+ .+++++||
T Consensus 176 ~~r~--~~d~vi~pS~~~-~~-----l~~~---~i~~v~GVd~~~f~~~~~-----~----~~~~~~~~~~~~~~~l~vG 235 (462)
T PLN02846 176 VVDI--YCHKVIRLSAAT-QD-----YPRS---IICNVHGVNPKFLEIGKL-----K----LEQQKNGEQAFTKGAYYIG 235 (462)
T ss_pred HHHH--hcCEEEccCHHH-HH-----HhhC---EEecCceechhhcCCCcc-----c----HhhhcCCCCCcceEEEEEe
Confidence 2222 144444333211 10 0011 222357999987753211 1 11222 22 35799999
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCH
Q 002979 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPR 421 (861)
Q Consensus 342 rld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~ 421 (861)
||.+.||+..+|+||.++.+..|+++ |+++| +|++.+++++.+.+ . +.. ++++.|..+.
T Consensus 236 RL~~eK~~~~Li~a~~~l~~~~~~~~----l~ivG-----dGp~~~~L~~~a~~----l-------~l~-~~vf~G~~~~ 294 (462)
T PLN02846 236 KMVWSKGYKELLKLLHKHQKELSGLE----VDLYG-----SGEDSDEVKAAAEK----L-------ELD-VRVYPGRDHA 294 (462)
T ss_pred cCcccCCHHHHHHHHHHHHhhCCCeE----EEEEC-----CCccHHHHHHHHHh----c-------CCc-EEEECCCCCH
Confidence 99999999999999999988888765 88887 67776666665543 2 222 3346665444
Q ss_pred HHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCceEeCCCC
Q 002979 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGAIRVNPWD 498 (861)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d 498 (861)
+ ++|+.+||||+||.+||||+|.+||||| |.|+|+++..| .+.+ .+++.+ .|
T Consensus 295 ~---~~~~~~DvFv~pS~~Et~g~v~lEAmA~-------------------G~PVVa~~~~~-~~~v~~~~ng~~~--~~ 349 (462)
T PLN02846 295 D---PLFHDYKVFLNPSTTDVVCTTTAEALAM-------------------GKIVVCANHPS-NEFFKQFPNCRTY--DD 349 (462)
T ss_pred H---HHHHhCCEEEECCCcccchHHHHHHHHc-------------------CCcEEEecCCC-cceeecCCceEec--CC
Confidence 3 6899999999999999999999999999 45588887776 4555 235555 48
Q ss_pred HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002979 499 IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 499 ~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
.++++++|.++|+.++++...+ .+ ..+++..-+++|++.++
T Consensus 350 ~~~~a~ai~~~l~~~~~~~~~~---a~---~~~SWe~~~~~l~~~~~ 390 (462)
T PLN02846 350 GKGFVRATLKALAEEPAPLTDA---QR---HELSWEAATERFLRVAD 390 (462)
T ss_pred HHHHHHHHHHHHccCchhHHHH---HH---HhCCHHHHHHHHHHHhc
Confidence 9999999999998544332211 11 26777777777776554
No 96
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=99.74 E-value=1.3e-16 Score=175.37 Aligned_cols=278 Identities=17% Similarity=0.126 Sum_probs=189.2
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCC-chHHH-HHHhhcCCEEeecChHhHHH
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP-VRDEI-LRGLLNCDLIGFHTFDYARH 268 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp-~r~~i-l~~ll~~dligF~t~~~~~~ 268 (861)
+++..+| |+|++|..+..++..++.+.....++.+.+|...+......... ....+ ...+-.+|.+-+.+....+.
T Consensus 75 ~~~~~~~--dvv~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~~s~~~~~~ 152 (359)
T cd03808 75 LLRKERP--DIVHTHTPKPGILGRLAARLAGVPKVIYTVHGLGFVFTSGGLKRRLYLLLERLALRFTDKVIFQNEDDRDL 152 (359)
T ss_pred HHHhcCC--CEEEEccccchhHHHHHHHHcCCCCEEEEecCcchhhccchhHHHHHHHHHHHHHhhccEEEEcCHHHHHH
Confidence 3445577 89999988877777777665666778888886532211000000 00111 11223578888888877776
Q ss_pred HHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccC
Q 002979 269 FLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKG 348 (861)
Q Consensus 269 Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KG 348 (861)
+.+. +.. .....+.+.|+|+|...+..... . ...++.+++++||+.+.||
T Consensus 153 ~~~~-----~~~-------------~~~~~~~~~~~~~~~~~~~~~~~-----~-------~~~~~~~i~~~G~~~~~k~ 202 (359)
T cd03808 153 ALKL-----GII-------------KKKKTVLIPGSGVDLDRFSPSPE-----P-------IPEDDPVFLFVARLLKDKG 202 (359)
T ss_pred HHHh-----cCC-------------CcCceEEecCCCCChhhcCcccc-----c-------cCCCCcEEEEEeccccccC
Confidence 6541 100 01234567799999877642111 0 1256789999999999999
Q ss_pred HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 349 ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 349 i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
+...++|++.+.+++|+++ |+.+|.... . ...... ++.+ .+..+.+.+.+. .+++..+|
T Consensus 203 ~~~li~~~~~l~~~~~~~~----l~i~G~~~~---~--~~~~~~---~~~~-------~~~~~~v~~~g~--~~~~~~~~ 261 (359)
T cd03808 203 IDELLEAARILKAKGPNVR----LLLVGDGDE---E--NPAAIL---EIEK-------LGLEGRVEFLGF--RDDVPELL 261 (359)
T ss_pred HHHHHHHHHHHHhcCCCeE----EEEEcCCCc---c--hhhHHH---HHHh-------cCCcceEEEeec--cccHHHHH
Confidence 9999999999988788765 887875431 1 111111 1111 122244555555 67899999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHH
Q 002979 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADA 505 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~a 505 (861)
+.||++++||.+||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|+++++++
T Consensus 262 ~~adi~i~ps~~e~~~~~~~Ea~~~-------------------G~Pvi~s~~~~~~~~i~~~~~g~~~~~~~~~~~~~~ 322 (359)
T cd03808 262 AAADVFVLPSYREGLPRVLLEAMAM-------------------GRPVIATDVPGCREAVIDGVNGFLVPPGDAEALADA 322 (359)
T ss_pred HhccEEEecCcccCcchHHHHHHHc-------------------CCCEEEecCCCchhhhhcCcceEEECCCCHHHHHHH
Confidence 9999999999999999999999999 45689999999988873 3799999999999999
Q ss_pred HHHHhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHH
Q 002979 506 MTLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFA 541 (861)
Q Consensus 506 i~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl 541 (861)
|.+++.. ++.+....++.+++ ...++...+++.++
T Consensus 323 i~~l~~~-~~~~~~~~~~~~~~~~~~~s~~~~~~~~~ 358 (359)
T cd03808 323 IERLIED-PELRARMGQAARKRAEEEFDEEIVVKKLL 358 (359)
T ss_pred HHHHHhC-HHHHHHHHHHHHHHHHHhcCHHHHHHHhh
Confidence 9998864 44455555566666 56688888887764
No 97
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=99.73 E-value=1.9e-17 Score=175.72 Aligned_cols=194 Identities=22% Similarity=0.335 Sum_probs=122.0
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc---CCceEecCcEEEEeCCc
Q 002979 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE---MLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~---~lgliaenG~~i~~~~~ 667 (861)
.++|++|+||||++ .+.....+..+.++. ....++.++++|||+...+.+.+...+ ...+|+.+|..|+...
T Consensus 2 ~~ll~sDlD~Tl~~---~~~~~~~~l~~~l~~-~~~~~~~~v~~TGRs~~~~~~~~~~~~l~~Pd~~I~svGt~I~~~~- 76 (247)
T PF05116_consen 2 PRLLASDLDGTLID---GDDEALARLEELLEQ-QARPEILFVYVTGRSLESVLRLLREYNLPQPDYIITSVGTEIYYGE- 76 (247)
T ss_dssp SEEEEEETBTTTBH---CHHHHHHHHHHHHHH-HHCCGEEEEEE-SS-HHHHHHHHHHCT-EE-SEEEETTTTEEEESS-
T ss_pred CEEEEEECCCCCcC---CCHHHHHHHHHHHHH-hhCCCceEEEECCCCHHHHHHHHHhCCCCCCCEEEecCCeEEEEcC-
Confidence 57999999999993 222233455555552 258999999999999999999887532 2348899999888832
Q ss_pred ceEEecCCccChHHHHHHHH-----HHHHHhhcCCCceE----eeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC
Q 002979 668 SEWETNHLGADLEWKKIVEP-----VMRSYTEATDGSNI----EIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE 738 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~-----i~~~y~~~~~gs~i----e~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 738 (861)
.|. .+..|.+.+.. .++......++... +...+.+.+.+...+. ...++.|++.+...
T Consensus 77 -~~~-----~d~~w~~~i~~~w~~~~v~~~l~~~~~l~~q~~~~q~~~k~sy~~~~~~~-------~~~~~~i~~~l~~~ 143 (247)
T PF05116_consen 77 -NWQ-----PDEEWQAHIDERWDRERVEEILAELPGLRPQPESEQRPFKISYYVDPDDS-------ADILEEIRARLRQR 143 (247)
T ss_dssp -TTE-----E-HHHHHHHHTT--HHHHHHHHHCHCCEEEGGCCCGCCTCECEEEETTSH-------CHHHHHHHHHHHCC
T ss_pred -CCc-----ChHHHHHHHHhcCChHHHHHHHHHhhCcccCCccccCCeeEEEEEecccc-------hhHHHHHHHHHHHc
Confidence 111 12234332221 11122222233221 2223344444443221 13455566655554
Q ss_pred CE---EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe
Q 002979 739 PA---VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV 815 (861)
Q Consensus 739 ~~---~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v 815 (861)
.. .+.++...++|.|+++|||.|+++|++++ ++++++++++|||.||++||.... .+|.|
T Consensus 144 ~l~~~~i~s~~~~ldilP~~a~K~~Al~~L~~~~---~~~~~~vl~aGDSgND~~mL~~~~--------------~~vvV 206 (247)
T PF05116_consen 144 GLRVNVIYSNGRDLDILPKGASKGAALRYLMERW---GIPPEQVLVAGDSGNDLEMLEGGD--------------HGVVV 206 (247)
T ss_dssp TCEEEEEECTCCEEEEEETT-SHHHHHHHHHHHH---T--GGGEEEEESSGGGHHHHCCSS--------------EEEE-
T ss_pred CCCeeEEEccceeEEEccCCCCHHHHHHHHHHHh---CCCHHHEEEEeCCCCcHHHHcCcC--------------CEEEE
Confidence 42 34567889999999999999999999999 999999999999999999995554 48999
Q ss_pred CCCC
Q 002979 816 GRKP 819 (861)
Q Consensus 816 G~~~ 819 (861)
||+.
T Consensus 207 ~Na~ 210 (247)
T PF05116_consen 207 GNAQ 210 (247)
T ss_dssp TTS-
T ss_pred cCCC
Confidence 9874
No 98
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=99.73 E-value=3.2e-16 Score=179.61 Aligned_cols=271 Identities=10% Similarity=0.028 Sum_probs=171.4
Q ss_pred CEEEEeCcccc--cHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCch-------HHHHHHh-hcCCEEeecChHhHHHH
Q 002979 200 DCVWVHDYHLM--VLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVR-------DEILRGL-LNCDLIGFHTFDYARHF 269 (861)
Q Consensus 200 D~VwvhDyhl~--llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r-------~~il~~l-l~~dligF~t~~~~~~F 269 (861)
|+|.+|..... .+...+-.+..+.|+.+.+|--+++..-.. .+.. ..+-+.+ -.||.|-..+....+.+
T Consensus 97 Dvi~~~~~~~~~~~~~a~~~~~~~~~~~V~~~h~~~~~~~~~~-~~~~~~~~~~~~~~e~~~~~~ad~ii~vS~~~~~~l 175 (415)
T cd03816 97 DYILIQNPPSIPTLLIAWLYCLLRRTKLIIDWHNYGYTILALK-LGENHPLVRLAKWYEKLFGRLADYNLCVTKAMKEDL 175 (415)
T ss_pred CEEEEeCCCCchHHHHHHHHHHHhCCeEEEEcCCchHHHHhcc-cCCCCHHHHHHHHHHHHHhhcCCEeeecCHHHHHHH
Confidence 99999985532 333444344457899999996443211000 1100 0111111 23676665555433332
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHH---------------H--cC
Q 002979 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEK---------------Q--FD 332 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~---------------~--~~ 332 (861)
.. .+ ....+|.++|+| +...|.+.. .. .....+.+ . -+
T Consensus 176 ~~-----~~---------------~~~~ki~vI~Ng-~~~~f~p~~---~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (415)
T cd03816 176 QQ-----FN---------------NWKIRATVLYDR-PPEQFRPLP---LE-EKHELFLKLAKTFLTRELRIGAVQLSEE 230 (415)
T ss_pred Hh-----hh---------------ccCCCeeecCCC-CHHHceeCc---HH-HHHHHHHhccccccccccccccceecCC
Confidence 21 11 122456778998 445554221 11 11111111 0 13
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHh------CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 002979 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQ------HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~------~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~ 406 (861)
+..++++++|+.+.||+..+++|+..+.+. +|+ +.|+++| +|+..+++++.++ +
T Consensus 231 ~~~vi~~~grl~~~K~~~~li~A~~~l~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~----~------- 290 (415)
T cd03816 231 RPALLVSSTSWTPDEDFGILLDALVAYEKSAATGPKLPK----LLCIITG-----KGPLKEKYLERIK----E------- 290 (415)
T ss_pred CceEEEEeccccCCCCHHHHHHHHHHHHHhhcccccCCC----EEEEEEe-----cCccHHHHHHHHH----H-------
Confidence 356888999999999999999999998764 344 4588888 3444445554444 2
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcccceec---ccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC
Q 002979 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVN---AVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG 483 (861)
Q Consensus 407 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvt---S~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (861)
.+...++++.+.++.+++..+|+.||++|++ +..+||+++++||||| |.|+|+|...|
T Consensus 291 ~~l~~~~~~~g~~~~~~~~~~l~~aDv~v~~~~~~~~~~~p~~~~Eama~-------------------G~PVI~s~~~~ 351 (415)
T cd03816 291 LKLKKVTIRTPWLSAEDYPKLLASADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCALDFKC 351 (415)
T ss_pred cCCCcEEEEcCcCCHHHHHHHHHhCCEEEEccccccccCCcHHHHHHHHc-------------------CCCEEEeCCCC
Confidence 3345688888889999999999999999864 3358899999999999 45689999988
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHhcCC--HHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002979 484 CSPSLS---GAIRVNPWDIDAVADAMTLAINMR--DSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 484 ~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~--~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
+.+.+. +|++|+ |++++|++|.++++.+ +++++.+.++.+++.. .+|...+.
T Consensus 352 ~~eiv~~~~~G~lv~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~~----~~~~~~~~ 408 (415)
T cd03816 352 IDELVKHGENGLVFG--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEESE----LRWDENWD 408 (415)
T ss_pred HHHHhcCCCCEEEEC--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhhh----cCHHHHHH
Confidence 888773 478884 9999999999999962 5666666666665553 44555443
No 99
>PLN02501 digalactosyldiacylglycerol synthase
Probab=99.72 E-value=8.1e-17 Score=185.51 Aligned_cols=316 Identities=12% Similarity=0.096 Sum_probs=185.0
Q ss_pred EeCChHHHHHHHhhcccccc--ccccccCCCCCCCCCCccChHhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcccccH
Q 002979 135 TFLPHDLQKKFYLGFCKQHL--WPLFHYMLPMCPDHGDRFDRVLWQAYVSANKIFADKVMEVINPDDDCVWVHDYHLMVL 212 (861)
Q Consensus 135 v~l~~~~~~~~y~gf~~~~l--wpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~ll 212 (861)
+|=++++++.|......+-. -|.|-.. ++| ++|....-.. .-+-... +.+...+| |+|++|..-.+.+
T Consensus 379 ~F~~p~eQe~~ir~wl~~r~g~~~~~~i~--fYp---g~~~~~~~SI-~p~gdI~--~~L~~f~P--DVVHLatP~~LGw 448 (794)
T PLN02501 379 TFSSPEEQESYIRNWLEERIGFKADFKIS--FYP---GKFSKERRSI-IPAGDTS--QFIPSKDA--DIAILEEPEHLNW 448 (794)
T ss_pred ccCCHHHHHHHHHHHHHHhcCCCCCceEE--eec---chhccCCccc-cchHHHH--HHhhccCC--CEEEECCchhhcc
Confidence 77788888888777663211 1222211 223 3443221111 1111111 12334466 9999998765554
Q ss_pred H---HHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH--HHHHhCCccccCCCe
Q 002979 213 P---TFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC--CSRMLGLDYESKRGH 287 (861)
Q Consensus 213 p---~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~--~~r~lg~~~~~~~~~ 287 (861)
. ....+++. ++....|+.||.+=-+.-+..-+.++. .++++|+.. |++++.++.....
T Consensus 449 ~~~Glr~ArKl~--PVVasyHTny~eYl~~y~~g~L~~~ll-------------k~l~~~v~r~hcD~VIaPS~atq~-- 511 (794)
T PLN02501 449 YHHGKRWTDKFN--HVVGVVHTNYLEYIKREKNGALQAFFV-------------KHINNWVTRAYCHKVLRLSAATQD-- 511 (794)
T ss_pred HHHHHHHHHHcC--CeEEEEeCCcHHHHhHhcchhHHHHHH-------------HHHHHHHHHhhCCEEEcCCHHHHH--
Confidence 4 23333443 699999999985322222222112111 133344443 6666655422111
Q ss_pred eeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHHHHHHHHHHHHHhCC
Q 002979 288 IGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHP 364 (861)
Q Consensus 288 ~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P 364 (861)
+ . +. .|.. ..|||++.|.+... . ... .++ ...+.+++||||.+.||+..+|+|+..+.++.|
T Consensus 512 --L--~-~~-vI~n-VnGVDte~F~P~~r---~----~~~-r~lgi~~~~kgiLfVGRLa~EKGld~LLeAla~L~~~~p 576 (794)
T PLN02501 512 --L--P-KS-VICN-VHGVNPKFLKIGEK---V----AEE-RELGQQAFSKGAYFLGKMVWAKGYRELIDLLAKHKNELD 576 (794)
T ss_pred --h--c-cc-ceee-cccccccccCCcch---h----HHH-HhcCCccccCceEEEEcccccCCHHHHHHHHHHHHhhCC
Confidence 1 1 11 1111 15999998863211 1 111 122 122458999999999999999999999988888
Q ss_pred CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCC
Q 002979 365 GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMN 444 (861)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~n 444 (861)
+++ |+++| +|++.+++++.+.+ .+ . .+ .|.+.. ++...+|+.+||||+||.+||||
T Consensus 577 nvr----LvIVG-----DGP~reeLe~la~e----Lg-------L-~V-~FLG~~--dd~~~lyasaDVFVlPS~sEgFG 632 (794)
T PLN02501 577 GFN----LDVFG-----NGEDAHEVQRAAKR----LD-------L-NL-NFLKGR--DHADDSLHGYKVFINPSISDVLC 632 (794)
T ss_pred CeE----EEEEc-----CCccHHHHHHHHHH----cC-------C-EE-EecCCC--CCHHHHHHhCCEEEECCCcccch
Confidence 765 88887 56665555554443 21 1 23 344443 34458999999999999999999
Q ss_pred CcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C--CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHH
Q 002979 445 LVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S--GAIRVNPWDIDAVADAMTLAINMRDSEKQLRH 521 (861)
Q Consensus 445 Lv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~--~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~ 521 (861)
+|++||||| |.|+|++...|.. .+ . ++++ +.|.++++++|.++|..++. + ...
T Consensus 633 lVlLEAMA~-------------------GlPVVATd~pG~e-~V~~g~nGll--~~D~EafAeAI~~LLsd~~~-r-l~~ 688 (794)
T PLN02501 633 TATAEALAM-------------------GKFVVCADHPSNE-FFRSFPNCLT--YKTSEDFVAKVKEALANEPQ-P-LTP 688 (794)
T ss_pred HHHHHHHHc-------------------CCCEEEecCCCCc-eEeecCCeEe--cCCHHHHHHHHHHHHhCchh-h-hHH
Confidence 999999999 4568888887743 34 2 3333 47999999999999986652 2 222
Q ss_pred HHhhhhhccCCHhHHHHHHHHHH
Q 002979 522 EKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 522 ~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
+. ...+++..-++++++..
T Consensus 689 ~a----~~~~SWeAaadrLle~~ 707 (794)
T PLN02501 689 EQ----RYNLSWEAATQRFMEYS 707 (794)
T ss_pred HH----HhhCCHHHHHHHHHHhh
Confidence 21 22567776677666543
No 100
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.71 E-value=4.5e-16 Score=173.12 Aligned_cols=263 Identities=17% Similarity=0.145 Sum_probs=175.4
Q ss_pred HcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002979 194 VINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 194 ~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
..+| |+|++|+...+.....+... .+.+..+++|...-....+..+ .+.-.-..+..||.|-..+..+.+.+..
T Consensus 81 ~~~~--Dii~~~~~~~~~~~~~~~~~-~~~~~i~~~h~~~~~~~~~~~~-~~~~~~~~~~~~d~vi~~s~~~~~~~~~-- 154 (357)
T cd03795 81 AKKA--DVIHLHFPNPLADLALLLLP-RKKPVVVHWHSDIVKQKLLLKL-YRPLQRRFLRRADAIVATSPNYAETSPV-- 154 (357)
T ss_pred CCCC--CEEEEecCcchHHHHHHHhc-cCceEEEEEcChhhccchhhhh-hhHHHHHHHHhcCEEEeCcHHHHHHHHH--
Confidence 3355 89999986654332222222 4678888999643222111000 1111222456688888777766654432
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHH
Q 002979 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 353 (861)
. + ....++.++|+|+|...+.... .. .........++++|+++||+.+.||+..++
T Consensus 155 --~-~---------------~~~~~~~~i~~gi~~~~~~~~~-----~~-~~~~~~~~~~~~~i~~~G~~~~~K~~~~li 210 (357)
T cd03795 155 --L-R---------------RFRDKVRVIPLGLDPARYPRPD-----AL-EEAIWRRAAGRPFFLFVGRLVYYKGLDVLL 210 (357)
T ss_pred --h-c---------------CCccceEEecCCCChhhcCCcc-----hh-hhHhhcCCCCCcEEEEecccccccCHHHHH
Confidence 0 0 0113567889999988764211 10 111111225678999999999999999999
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002979 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (861)
Q Consensus 354 ~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 433 (861)
+|++++. ++.|+.+|. ++....+++ ++.+ .+..+-+.+.|.++.+++..+|+.||+
T Consensus 211 ~a~~~l~--------~~~l~i~G~-----g~~~~~~~~----~~~~-------~~~~~~V~~~g~v~~~~~~~~~~~ad~ 266 (357)
T cd03795 211 EAAAALP--------DAPLVIVGE-----GPLEAELEA----LAAA-------LGLLDRVRFLGRLDDEEKAALLAACDV 266 (357)
T ss_pred HHHHhcc--------CcEEEEEeC-----ChhHHHHHH----HHHh-------cCCcceEEEcCCCCHHHHHHHHHhCCE
Confidence 9998863 455888873 333333333 3222 234456788899999999999999999
Q ss_pred ceeccc--ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC----CceEeCCCCHHHHHHHHH
Q 002979 434 CIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS----GAIRVNPWDIDAVADAMT 507 (861)
Q Consensus 434 ~vvtS~--~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~----~ai~vnP~d~~~~A~ai~ 507 (861)
+++||. .||+|++.+|||+| +.|+|+|+..|..+.+. .|++++|.|+++++++|.
T Consensus 267 ~i~ps~~~~e~~g~~~~Ea~~~-------------------g~Pvi~~~~~~~~~~i~~~~~~g~~~~~~d~~~~~~~i~ 327 (357)
T cd03795 267 FVFPSVERSEAFGIVLLEAMAF-------------------GKPVISTEIGTGGSYVNLHGVTGLVVPPGDPAALAEAIR 327 (357)
T ss_pred EEeCCcccccccchHHHHHHHc-------------------CCCEEecCCCCchhHHhhCCCceEEeCCCCHHHHHHHHH
Confidence 999996 59999999999999 45689999888887663 378999999999999999
Q ss_pred HHhcCCHHHHHHHHHHhhhhhcc
Q 002979 508 LAINMRDSEKQLRHEKHYRYVST 530 (861)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v~~ 530 (861)
++++. +++++...++.++++.+
T Consensus 328 ~l~~~-~~~~~~~~~~~~~~~~~ 349 (357)
T cd03795 328 RLLED-PELRERLGEAARERAEE 349 (357)
T ss_pred HHHHC-HHHHHHHHHHHHHHHHH
Confidence 99984 45555555566666543
No 101
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=99.70 E-value=1.2e-15 Score=173.78 Aligned_cols=189 Identities=16% Similarity=0.159 Sum_probs=135.6
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccCHHHHH----HHHHHHHHhCCCCCCcEEE
Q 002979 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLKL----LAMEQLLQQHPGMRGKVVL 372 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~l----~Af~~ll~~~P~~~~~vvL 372 (861)
++.++|+|||.+.|......+ ..+ .++++|+++||+++.||+..++ .++..+.+++|+++ |
T Consensus 197 ~v~vipngvd~~~f~~~~~~~----------~~~~~~~~~ilf~G~l~~~k~~~~l~~~~~~~~~~l~~~~p~~~----l 262 (397)
T TIGR03087 197 RITAFPNGVDADFFSPDRDYP----------NPYPPGKRVLVFTGAMDYWPNIDAVVWFAERVFPAVRARRPAAE----F 262 (397)
T ss_pred CeEEeecccchhhcCCCcccc----------CCCCCCCcEEEEEEecCCccCHHHHHHHHHHHHHHHHHHCCCcE----E
Confidence 567889999998875321100 111 3567899999999999999887 56667777888876 8
Q ss_pred EEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceeccc-ccCCCCcceeee
Q 002979 373 VQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYI 451 (861)
Q Consensus 373 vqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~ 451 (861)
+++|. ++. . ++.++.. .+-+.+.|.++ ++..+|+.||++|+||. .||++++++|||
T Consensus 263 ~ivG~-----g~~-~----~~~~l~~-----------~~~V~~~G~v~--~~~~~~~~adv~v~Ps~~~eG~~~~~lEAm 319 (397)
T TIGR03087 263 YIVGA-----KPS-P----AVRALAA-----------LPGVTVTGSVA--DVRPYLAHAAVAVAPLRIARGIQNKVLEAM 319 (397)
T ss_pred EEECC-----CCh-H----HHHHhcc-----------CCCeEEeeecC--CHHHHHHhCCEEEecccccCCcccHHHHHH
Confidence 88873 222 1 1222211 12345677776 68999999999999996 699999999999
Q ss_pred eeecCCCcccccccCCCCCCCCceEEeccCCCCccc-C-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-
Q 002979 452 VCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS-L-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV- 528 (861)
Q Consensus 452 ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~-l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v- 528 (861)
|| |.|+|+|..++.... . +.++++. .|++++|++|.++++ .++.++...++.++++
T Consensus 320 a~-------------------G~PVV~t~~~~~~i~~~~~~g~lv~-~~~~~la~ai~~ll~-~~~~~~~~~~~ar~~v~ 378 (397)
T TIGR03087 320 AM-------------------AKPVVASPEAAEGIDALPGAELLVA-ADPADFAAAILALLA-NPAEREELGQAARRRVL 378 (397)
T ss_pred Hc-------------------CCCEEecCcccccccccCCcceEeC-CCHHHHHHHHHHHHc-CHHHHHHHHHHHHHHHH
Confidence 99 455888876432111 1 3478885 899999999999997 4455666677778877
Q ss_pred ccCCHhHHHHHHHHHH
Q 002979 529 STHDVAYWARSFAQDL 544 (861)
Q Consensus 529 ~~~~~~~W~~~fl~~l 544 (861)
..+++...++++.+-+
T Consensus 379 ~~fsw~~~~~~~~~~l 394 (397)
T TIGR03087 379 QHYHWPRNLARLDALL 394 (397)
T ss_pred HhCCHHHHHHHHHHHh
Confidence 4689998888876654
No 102
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=99.70 E-value=5.3e-16 Score=169.96 Aligned_cols=249 Identities=17% Similarity=0.128 Sum_probs=167.8
Q ss_pred HHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHH
Q 002979 193 EVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSC 272 (861)
Q Consensus 193 ~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~ 272 (861)
+..+| |+|++|++....+...+..+. +.++.+.+|..++..... ..+........+..+|.+-+.+....+.+...
T Consensus 78 ~~~~~--dii~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~ii~~s~~~~~~~~~~ 153 (353)
T cd03811 78 RKEKP--DVVISHLTTTPNVLALLAARL-GTKLIVWEHNSLSLELKR-KLRLLLLIRKLYRRADKIVAVSEGVKEDLLKL 153 (353)
T ss_pred HhcCC--CEEEEcCccchhHHHHHHhhc-CCceEEEEcCcchhhhcc-chhHHHHHHhhccccceEEEeccchhhhHHHh
Confidence 34466 899999882233333444444 789999999887543211 11111123444567888888777666555542
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~ 352 (861)
. + ....++.++|+|+|...+..... ... ......++.+++++||+++.||+...
T Consensus 154 ~----~---------------~~~~~~~vi~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~i~~~g~~~~~k~~~~~ 207 (353)
T cd03811 154 L----G---------------IPPDKIEVIYNPIDIEEIRALAE-----EPL--ELGIPPDGPVILAVGRLSPQKGFDTL 207 (353)
T ss_pred h----c---------------CCccccEEecCCcChhhcCcccc-----hhh--hcCCCCCceEEEEEecchhhcChHHH
Confidence 1 0 01246778899999887643211 000 00112567899999999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002979 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|++.+.+++++++ |+.+|. ++...++++.+ .+. +..+.+.+.+.+ +++..+|+.||
T Consensus 208 i~~~~~l~~~~~~~~----l~i~G~-----~~~~~~~~~~~----~~~-------~~~~~v~~~g~~--~~~~~~~~~~d 265 (353)
T cd03811 208 IRAFALLRKEGPDAR----LVILGD-----GPLREELEALA----KEL-------GLADRVHFLGFQ--SNPYPYLKAAD 265 (353)
T ss_pred HHHHHHhhhcCCCce----EEEEcC-----CccHHHHHHHH----Hhc-------CCCccEEEeccc--CCHHHHHHhCC
Confidence 999999988777665 887773 23333333332 222 233455566654 46889999999
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHH
Q 002979 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~a 509 (861)
+++.||..||+|++++|||+| |.|+|+|+.+|..+.+. .|+++++.|.+++++++..+
T Consensus 266 ~~i~ps~~e~~~~~~~Ea~~~-------------------G~PvI~~~~~~~~e~i~~~~~g~~~~~~~~~~~~~~~~~i 326 (353)
T cd03811 266 LFVLSSRYEGFPNVLLEAMAL-------------------GTPVVATDCPGPREILEDGENGLLVPVGDEAALAAAALAL 326 (353)
T ss_pred EEEeCcccCCCCcHHHHHHHh-------------------CCCEEEcCCCChHHHhcCCCceEEECCCCHHHHHHHHHHH
Confidence 999999999999999999999 45689999998888773 48999999999995555544
Q ss_pred hcC
Q 002979 510 INM 512 (861)
Q Consensus 510 L~m 512 (861)
..+
T Consensus 327 ~~~ 329 (353)
T cd03811 327 LDL 329 (353)
T ss_pred Hhc
Confidence 443
No 103
>PHA01630 putative group 1 glycosyl transferase
Probab=99.70 E-value=3.9e-16 Score=172.87 Aligned_cols=186 Identities=12% Similarity=0.088 Sum_probs=135.4
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEec
Q 002979 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVN 377 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~ 377 (861)
++.++|+|||.+.|.+.. . ...++.++++++|+.+.||+..+|+|++++.+++|+++ |+.+|.
T Consensus 119 ~i~vIpNGVd~~~f~~~~----~---------~~~~~~vl~~~g~~~~~Kg~d~Li~A~~~l~~~~~~~~----llivG~ 181 (331)
T PHA01630 119 PIYVIPHNLNPRMFEYKP----K---------EKPHPCVLAILPHSWDRKGGDIVVKIFHELQNEGYDFY----FLIKSS 181 (331)
T ss_pred CEEEECCCCCHHHcCCCc----c---------ccCCCEEEEEeccccccCCHHHHHHHHHHHHhhCCCEE----EEEEeC
Confidence 567889999988774210 0 01345566777899999999999999999988887665 887772
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCC
Q 002979 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (861)
Q Consensus 378 p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~ 457 (861)
. .. +. ++. .+ .+ +.+.++.+++..+|+.||+||+||..||||++++|||||
T Consensus 182 ~-----~~--~~--~l~----~~------~~------~~~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~---- 232 (331)
T PHA01630 182 N-----ML--DP--RLF----GL------NG------VKTPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALAL---- 232 (331)
T ss_pred c-----cc--ch--hhc----cc------cc------eeccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHc----
Confidence 1 11 11 110 00 11 234688999999999999999999999999999999999
Q ss_pred CcccccccCCCCCCCCceEEeccCCCCcccCCC-----------------------ceEeCCCCHHHHHHHHHHHhcCC-
Q 002979 458 PIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG-----------------------AIRVNPWDIDAVADAMTLAINMR- 513 (861)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~-----------------------ai~vnP~d~~~~A~ai~~aL~m~- 513 (861)
|.|+|+|..+|..+.+.+ |++++| |.++++++|.++|..+
T Consensus 233 ---------------G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~~v~~-~~~~~~~~ii~~l~~~~ 296 (331)
T PHA01630 233 ---------------GLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGYFLDP-DIEDAYQKLLEALANWT 296 (331)
T ss_pred ---------------CCCEEEeCCCCchhhccCCCceEEeeecccccccccCCcccccccCC-CHHHHHHHHHHHHhCCC
Confidence 556999998887877632 444555 7888999999998764
Q ss_pred HHHHHHH-HHHhhhhhccCCHhHHHHHHHHHHH
Q 002979 514 DSEKQLR-HEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 514 ~~e~~~r-~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
+++++.+ ......+..++++...++.+++-++
T Consensus 297 ~~~~~~~~~~~~~~~~~~fs~~~ia~k~~~l~~ 329 (331)
T PHA01630 297 PEKKKENLEGRAILYRENYSYNAIAKMWEKILE 329 (331)
T ss_pred HHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHh
Confidence 2334433 3344445677999999998887664
No 104
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=99.69 E-value=6.8e-16 Score=172.56 Aligned_cols=224 Identities=18% Similarity=0.172 Sum_probs=154.1
Q ss_pred CCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCC----ChHHH-hcCCc-------------hHHHHHHhhcCCEEee
Q 002979 199 DDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFP----SSEIY-RTLPV-------------RDEILRGLLNCDLIGF 260 (861)
Q Consensus 199 ~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP----~~e~f-~~lp~-------------r~~il~~ll~~dligF 260 (861)
-|+|+++.. .+....+ +.+..+..+++|.|.+ ..+.+ ...+. +....+.+..+|.|..
T Consensus 84 ~D~v~~~~~--~~~~~~~--~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ii~ 159 (351)
T cd03804 84 YDLVISSSH--AVAKGVI--TRPDQLHICYCHTPMRYAWDLYHDYLKESGLGKRLALRLLLHYLRIWDRRSAARVDYFIA 159 (351)
T ss_pred CCEEEEcCc--HHhcccc--CCCCCcEEEEeCCchHHHhcCchHhhhhcccchhhHHHHHHHHHHHHHHHHhcCCCEEEE
Confidence 388877643 2222222 4557888889998631 11111 11110 1111223456788777
Q ss_pred cChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEee
Q 002979 261 HTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGI 340 (861)
Q Consensus 261 ~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~V 340 (861)
.+....+.+... . +. ...++|+|+|.+.|.... ..+++++++
T Consensus 160 ~S~~~~~~~~~~----~----------------~~--~~~vi~~~~d~~~~~~~~----------------~~~~~il~~ 201 (351)
T cd03804 160 NSRFVARRIKKY----Y----------------GR--DATVIYPPVDTDRFTPAE----------------EKEDYYLSV 201 (351)
T ss_pred CCHHHHHHHHHH----h----------------CC--CcEEECCCCCHhhcCcCC----------------CCCCEEEEE
Confidence 776655555331 1 11 124678999987764210 235679999
Q ss_pred cCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC
Q 002979 341 DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP 420 (861)
Q Consensus 341 drld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~ 420 (861)
||+.+.||+..+++|++++ | ++ |+.+|. +++.+++++ . ..+.+.+.|.++
T Consensus 202 G~~~~~K~~~~li~a~~~~----~-~~----l~ivG~-----g~~~~~l~~-------~---------~~~~V~~~g~~~ 251 (351)
T cd03804 202 GRLVPYKRIDLAIEAFNKL----G-KR----LVVIGD-----GPELDRLRA-------K---------AGPNVTFLGRVS 251 (351)
T ss_pred EcCccccChHHHHHHHHHC----C-Cc----EEEEEC-----ChhHHHHHh-------h---------cCCCEEEecCCC
Confidence 9999999999999999865 4 44 787873 344333332 0 113466788999
Q ss_pred HHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCC
Q 002979 421 RFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPW 497 (861)
Q Consensus 421 ~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~ 497 (861)
.+++.++|+.||++++||. ||||++++|||+| +.|+|+|..+|..+.+. .|++++|.
T Consensus 252 ~~~~~~~~~~ad~~v~ps~-e~~g~~~~Eama~-------------------G~Pvi~~~~~~~~e~i~~~~~G~~~~~~ 311 (351)
T cd03804 252 DEELRDLYARARAFLFPAE-EDFGIVPVEAMAS-------------------GTPVIAYGKGGALETVIDGVTGILFEEQ 311 (351)
T ss_pred HHHHHHHHHhCCEEEECCc-CCCCchHHHHHHc-------------------CCCEEEeCCCCCcceeeCCCCEEEeCCC
Confidence 9999999999999999999 9999999999999 45689999988887772 48999999
Q ss_pred CHHHHHHHHHHHhcCCH
Q 002979 498 DIDAVADAMTLAINMRD 514 (861)
Q Consensus 498 d~~~~A~ai~~aL~m~~ 514 (861)
|++++|++|..+++.++
T Consensus 312 ~~~~la~~i~~l~~~~~ 328 (351)
T cd03804 312 TVESLAAAVERFEKNED 328 (351)
T ss_pred CHHHHHHHHHHHHhCcc
Confidence 99999999999998764
No 105
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=99.69 E-value=1.6e-15 Score=167.47 Aligned_cols=246 Identities=14% Similarity=0.087 Sum_probs=164.2
Q ss_pred HHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHH
Q 002979 191 VMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFL 270 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl 270 (861)
+++..++ |+|++|+....++ + .+..+.++.+.+|..++.... .....+...+.+-+-+...++.+.
T Consensus 82 ~~~~~~~--Divh~~~~~~~~~---~-~~~~~~~~v~~~h~~~~~~~~--------~~~~~~~~~~~~~~~s~~~~~~~~ 147 (335)
T cd03802 82 ALAAGDF--DIVHNHSLHLPLP---F-ARPLPVPVVTTLHGPPDPELL--------KLYYAARPDVPFVSISDAQRRPWP 147 (335)
T ss_pred HHhcCCC--CEEEecCcccchh---h-hcccCCCEEEEecCCCCcccc--------hHHHhhCcCCeEEEecHHHHhhcc
Confidence 4445566 8999999887776 2 334568899999987643211 123333344443332322221110
Q ss_pred HHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHH
Q 002979 271 SCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGIS 350 (861)
Q Consensus 271 ~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~ 350 (861)
. . .++.++|+|+|++.|.. ...++.+++++||+.+.||+.
T Consensus 148 --------------------~---~-~~~~vi~ngvd~~~~~~----------------~~~~~~~i~~~Gr~~~~Kg~~ 187 (335)
T cd03802 148 --------------------P---L-PWVATVHNGIDLDDYPF----------------RGPKGDYLLFLGRISPEKGPH 187 (335)
T ss_pred --------------------c---c-cccEEecCCcChhhCCC----------------CCCCCCEEEEEEeeccccCHH
Confidence 0 0 35678999999988742 013567899999999999999
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002979 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (861)
Q Consensus 351 ~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 430 (861)
.+++|+.+ ++++ |+++|... ....+...+.+... ..+.+.+.|.++..++..+|+.
T Consensus 188 ~li~~~~~-----~~~~----l~i~G~~~-----~~~~~~~~~~~~~~----------~~~~v~~~G~~~~~~~~~~~~~ 243 (335)
T cd03802 188 LAIRAARR-----AGIP----LKLAGPVS-----DPDYFYREIAPELL----------DGPDIEYLGEVGGAEKAELLGN 243 (335)
T ss_pred HHHHHHHh-----cCCe----EEEEeCCC-----CHHHHHHHHHHhcc----------cCCcEEEeCCCCHHHHHHHHHh
Confidence 99998754 3444 88787432 21222222221100 1245678889999999999999
Q ss_pred cccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHH
Q 002979 431 AECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAM 506 (861)
Q Consensus 431 ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai 506 (861)
||++|+||. .||||++++|||+| |.|+|+|+.+|..+.+. .++++++ +++++++|
T Consensus 244 ~d~~v~ps~~~E~~~~~~lEAma~-------------------G~PvI~~~~~~~~e~i~~~~~g~l~~~--~~~l~~~l 302 (335)
T cd03802 244 ARALLFPILWEEPFGLVMIEAMAC-------------------GTPVIAFRRGAVPEVVEDGVTGFLVDS--VEELAAAV 302 (335)
T ss_pred CcEEEeCCcccCCcchHHHHHHhc-------------------CCCEEEeCCCCchhheeCCCcEEEeCC--HHHHHHHH
Confidence 999999997 59999999999999 55699999999888773 4788887 99999999
Q ss_pred HHHhcCCHHHHHHHHHHhhhh-hccCCHhHHHHHHHH
Q 002979 507 TLAINMRDSEKQLRHEKHYRY-VSTHDVAYWARSFAQ 542 (861)
Q Consensus 507 ~~aL~m~~~e~~~r~~~~~~~-v~~~~~~~W~~~fl~ 542 (861)
.+++..+.+. .++. ...+++..-++++++
T Consensus 303 ~~l~~~~~~~-------~~~~~~~~~s~~~~~~~~~~ 332 (335)
T cd03802 303 ARADRLDRAA-------CRRRAERRFSAARMVDDYLA 332 (335)
T ss_pred HHHhccHHHH-------HHHHHHHhCCHHHHHHHHHH
Confidence 9987654321 1112 244666666666554
No 106
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=99.68 E-value=1.9e-15 Score=168.71 Aligned_cols=266 Identities=14% Similarity=0.018 Sum_probs=170.7
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHH-----HHhhcCCEEeecChHhHHHHHHHHH
Q 002979 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-----RGLLNCDLIGFHTFDYARHFLSCCS 274 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il-----~~ll~~dligF~t~~~~~~Fl~~~~ 274 (861)
|+++||.......+.....+..+.++.+.+|..-.....+.. ....++ ..+..+|.|-..+....+.+..
T Consensus 86 ~~~~i~~~~~~~~~~~~~~~~~~~~~v~~~h~~~~~~~~~~~--~~~~~~~~~~~~~~~~ad~ii~~s~~~~~~~~~--- 160 (363)
T cd04955 86 DIDHVHALGPAIAPFLPLLRLKGKKVVVNMDGLEWKRAKWGR--PAKRYLKFGEKLAVKFADRLIADSPGIKEYLKE--- 160 (363)
T ss_pred CeEEEEecCccHHHHHHHHHhcCCCEEEEccCcceeeccccc--chhHHHHHHHHHHHhhccEEEeCCHHHHHHHHH---
Confidence 566666555443333222222367888888852111111100 001111 1344678887777644443322
Q ss_pred HHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHH--cCCCeEEEeecCcccccCHHHH
Q 002979 275 RMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQ--FDGKKLILGIDDMDIFKGISLK 352 (861)
Q Consensus 275 r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~--~~~~~vil~Vdrld~~KGi~~~ 352 (861)
.. |... .++|+|+|...+.. ....++. +..++.++++||+.+.||+..+
T Consensus 161 -~~----------------~~~~--~~i~ngv~~~~~~~----------~~~~~~~~~~~~~~~i~~~G~~~~~Kg~~~l 211 (363)
T cd04955 161 -KY----------------GRDS--TYIPYGADHVVSSE----------EDEILKKYGLEPGRYYLLVGRIVPENNIDDL 211 (363)
T ss_pred -hc----------------CCCC--eeeCCCcChhhcch----------hhhhHHhcCCCCCcEEEEEecccccCCHHHH
Confidence 11 1111 67899999876532 0111222 2345678899999999999999
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002979 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
++|+.++.. ++.|+.+|... ...++.+++.+ ++ +..+.+.+.|.++.+++..+|+.||
T Consensus 212 i~a~~~l~~-------~~~l~ivG~~~-----~~~~~~~~~~~-------~~---~~~~~V~~~g~~~~~~~~~~~~~ad 269 (363)
T cd04955 212 IEAFSKSNS-------GKKLVIVGNAD-----HNTPYGKLLKE-------KA---AADPRIIFVGPIYDQELLELLRYAA 269 (363)
T ss_pred HHHHHhhcc-------CceEEEEcCCC-----CcchHHHHHHH-------Hh---CCCCcEEEccccChHHHHHHHHhCC
Confidence 999987632 34588888532 11233333332 11 1234567888999999999999999
Q ss_pred cceecccc-cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCceEeCCCCHHHHHHHHHHHh
Q 002979 433 CCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGAIRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 433 v~vvtS~~-EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ai~vnP~d~~~~A~ai~~aL 510 (861)
++++||.. ||||++++|||+| +.|+|+|..+|..+.+ .++++++|.|. +|++|.+++
T Consensus 270 ~~v~ps~~~e~~~~~~~EAma~-------------------G~PvI~s~~~~~~e~~~~~g~~~~~~~~--l~~~i~~l~ 328 (363)
T cd04955 270 LFYLHGHSVGGTNPSLLEAMAY-------------------GCPVLASDNPFNREVLGDKAIYFKVGDD--LASLLEELE 328 (363)
T ss_pred EEEeCCccCCCCChHHHHHHHc-------------------CCCEEEecCCccceeecCCeeEecCchH--HHHHHHHHH
Confidence 99999999 9999999999999 5569999988887777 45788888776 999999999
Q ss_pred cCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHH
Q 002979 511 NMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQD 543 (861)
Q Consensus 511 ~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~ 543 (861)
+.++ .+....++.++.+. .+++..-++++++.
T Consensus 329 ~~~~-~~~~~~~~~~~~~~~~fs~~~~~~~~~~~ 361 (363)
T cd04955 329 ADPE-EVSAMAKAARERIREKYTWEKIADQYEEL 361 (363)
T ss_pred hCHH-HHHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 8663 34444555566654 47888877777654
No 107
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=99.67 E-value=1.7e-15 Score=168.99 Aligned_cols=194 Identities=15% Similarity=0.179 Sum_probs=141.0
Q ss_pred EEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCccc--ccCHHHHHHHHHHHHHh-CCCCCCcE
Q 002979 297 VYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDI--FKGISLKLLAMEQLLQQ-HPGMRGKV 370 (861)
Q Consensus 297 ~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~--~KGi~~~l~Af~~ll~~-~P~~~~~v 370 (861)
.++.++|+|||...+... .. ...++.+ .++.+++.+++... .||+...++|++.+.++ .|+ +
T Consensus 159 ~~~~vi~ngi~~~~~~~~-----~~---~~~~~~~~~~~~~~~i~~~~~~~~~~~K~~~~ll~a~~~l~~~~~~~----~ 226 (365)
T cd03825 159 IPIEVIPNGIDTTIFRPR-----DK---REARKRLGLPADKKIILFGAVGGTDPRKGFDELIEALKRLAERWKDD----I 226 (365)
T ss_pred CceEEeCCCCcccccCCC-----cH---HHHHHHhCCCCCCeEEEEEecCCCccccCHHHHHHHHHHhhhccCCC----e
Confidence 367789999998877421 11 1223333 34566666666644 89999999999988665 344 4
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCC-HHHHHHHHHhcccceecccccCCCCccee
Q 002979 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVP-RFEKSAYYAVAECCIVNAVRDGMNLVPYK 449 (861)
Q Consensus 371 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~-~~el~aly~~ADv~vvtS~~EG~nLv~~E 449 (861)
.++.+|... ...+ . +....+.+.+.++ .+++..+|+.||+++.||..||||++++|
T Consensus 227 ~~~i~G~~~-----~~~~--~----------------~~~~~v~~~g~~~~~~~~~~~~~~ad~~l~ps~~e~~g~~~~E 283 (365)
T cd03825 227 ELVVFGASD-----PEIP--P----------------DLPFPVHYLGSLNDDESLALIYSAADVFVVPSLQENFPNTAIE 283 (365)
T ss_pred EEEEeCCCc-----hhhh--c----------------cCCCceEecCCcCCHHHHHHHHHhCCEEEeccccccccHHHHH
Confidence 588777432 1000 0 1113456677787 88999999999999999999999999999
Q ss_pred eeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhh
Q 002979 450 YIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYR 526 (861)
Q Consensus 450 a~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~ 526 (861)
||+| +.|+|+|..+|..+.+. .++++++.|++++|++|.++++. ++++..+.++.++
T Consensus 284 am~~-------------------g~PvI~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~l~~l~~~-~~~~~~~~~~~~~ 343 (365)
T cd03825 284 ALAC-------------------GTPVVAFDVGGIPDIVDHGVTGYLAKPGDPEDLAEGIEWLLAD-PDEREELGEAARE 343 (365)
T ss_pred HHhc-------------------CCCEEEecCCCChhheeCCCceEEeCCCCHHHHHHHHHHHHhC-HHHHHHHHHHHHH
Confidence 9999 45689999888888773 48999999999999999999974 3445555566666
Q ss_pred hhc-cCCHhHHHHHHHHHHH
Q 002979 527 YVS-THDVAYWARSFAQDLE 545 (861)
Q Consensus 527 ~v~-~~~~~~W~~~fl~~l~ 545 (861)
++. .+++...++++++-++
T Consensus 344 ~~~~~~s~~~~~~~~~~~y~ 363 (365)
T cd03825 344 LAENEFDSRVQAKRYLSLYE 363 (365)
T ss_pred HHHHhcCHHHHHHHHHHHHh
Confidence 664 5888888888876554
No 108
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=99.66 E-value=1e-14 Score=167.76 Aligned_cols=285 Identities=17% Similarity=0.170 Sum_probs=177.9
Q ss_pred HHHHHHHHcCCCCCEEEEeCcccccHHHHHHh-hcCCCeEEEEEecCCC-ChHHHhcCCchHHHHHHhh-cCCEEeecCh
Q 002979 187 FADKVMEVINPDDDCVWVHDYHLMVLPTFLRK-RFNRIKLGFFLHSPFP-SSEIYRTLPVRDEILRGLL-NCDLIGFHTF 263 (861)
Q Consensus 187 fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~-~~~~~~i~~flH~PfP-~~e~f~~lp~r~~il~~ll-~~dligF~t~ 263 (861)
...++++..+| |+|++|.+.++ |.++.. +..++++.+..|.-.+ +...|+.+ ..+.+.++ .+|.|-.++.
T Consensus 115 ~~~~~l~~~~P--d~v~~~~~~~~--~~~l~~~~~~~ip~vl~~~~~~~~s~~~~~~~---~~~~r~~~~~~d~ii~~S~ 187 (425)
T PRK05749 115 AVRRFLRFWRP--KLVIIMETELW--PNLIAELKRRGIPLVLANARLSERSFKRYQKF---KRFYRLLFKNIDLVLAQSE 187 (425)
T ss_pred HHHHHHHhhCC--CEEEEEecchh--HHHHHHHHHCCCCEEEEeccCChhhHHHHHHH---HHHHHHHHHhCCEEEECCH
Confidence 44555677788 89999988765 555533 3345777776554322 22233322 22333333 4799999998
Q ss_pred HhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEeccc-CCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeec
Q 002979 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVG-VHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGID 341 (861)
Q Consensus 264 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~G-Id~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vd 341 (861)
...+.+.+ +|+. .. +.++|++ +|.... +........+++.+ .+++++++++
T Consensus 188 ~~~~~l~~-----~g~~---------------~~-i~vi~n~~~d~~~~------~~~~~~~~~~r~~~~~~~~vil~~~ 240 (425)
T PRK05749 188 EDAERFLA-----LGAK---------------NE-VTVTGNLKFDIEVP------PELAARAATLRRQLAPNRPVWIAAS 240 (425)
T ss_pred HHHHHHHH-----cCCC---------------CC-cEecccccccCCCC------hhhHHHHHHHHHHhcCCCcEEEEeC
Confidence 88877764 2321 11 2344542 222111 11112334566666 6788899998
Q ss_pred CcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHH-HHHHHHHHHHHHHHhhc---cCCCCcc----cEE
Q 002979 342 DMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDV-QEAKKETYLTAKRINEV---YGSPNYE----PVV 413 (861)
Q Consensus 342 rld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~-~~~~~~v~~l~~~IN~~---~~~~~~~----pvv 413 (861)
+. .|+...+++||.++++++|+++ |+++| ++++. +++++.++ +.+-. +.. +.. ..+
T Consensus 241 ~~--~~~~~~ll~A~~~l~~~~~~~~----liivG-----~g~~r~~~l~~~~~----~~gl~~~~~~~-~~~~~~~~~v 304 (425)
T PRK05749 241 TH--EGEEELVLDAHRALLKQFPNLL----LILVP-----RHPERFKEVEELLK----KAGLSYVRRSQ-GEPPSADTDV 304 (425)
T ss_pred CC--chHHHHHHHHHHHHHHhCCCcE----EEEcC-----CChhhHHHHHHHHH----hCCCcEEEccC-CCCCCCCCcE
Confidence 75 6889999999999998899876 77776 44543 34444433 32211 100 000 123
Q ss_pred EEcCCCCHHHHHHHHHhccccee-cccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCccc----C
Q 002979 414 LIDRPVPRFEKSAYYAVAECCIV-NAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS----L 488 (861)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vv-tS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~----l 488 (861)
++.+ +..|+..+|+.||++++ +|..||+|++++|||+| +.|+|++...|...+ +
T Consensus 305 ~l~~--~~~el~~~y~~aDi~~v~~S~~e~~g~~~lEAma~-------------------G~PVI~g~~~~~~~e~~~~~ 363 (425)
T PRK05749 305 LLGD--TMGELGLLYAIADIAFVGGSLVKRGGHNPLEPAAF-------------------GVPVISGPHTFNFKEIFERL 363 (425)
T ss_pred EEEe--cHHHHHHHHHhCCEEEECCCcCCCCCCCHHHHHHh-------------------CCCEEECCCccCHHHHHHHH
Confidence 3333 36799999999999665 68889999999999999 456887765443322 2
Q ss_pred -CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002979 489 -SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 489 -~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
.++.++.|.|.+++|++|.++++ +++.+..+.++.++++.++. .-+++.++.+.
T Consensus 364 ~~~g~~~~~~d~~~La~~l~~ll~-~~~~~~~m~~~a~~~~~~~~--~~~~~~~~~l~ 418 (425)
T PRK05749 364 LQAGAAIQVEDAEDLAKAVTYLLT-DPDARQAYGEAGVAFLKQNQ--GALQRTLQLLE 418 (425)
T ss_pred HHCCCeEEECCHHHHHHHHHHHhc-CHHHHHHHHHHHHHHHHhCc--cHHHHHHHHHH
Confidence 45778889999999999999997 45566667777788886652 33344444443
No 109
>PLN02275 transferase, transferring glycosyl groups
Probab=99.63 E-value=1.5e-14 Score=163.34 Aligned_cols=239 Identities=10% Similarity=-0.014 Sum_probs=156.0
Q ss_pred cCCCCCEEEEeCccccc--HHHHHHhhcCCCeEEEEEecCCCChHHHhc-C---C----chHHHHHHh-hcCCEEeecCh
Q 002979 195 INPDDDCVWVHDYHLMV--LPTFLRKRFNRIKLGFFLHSPFPSSEIYRT-L---P----VRDEILRGL-LNCDLIGFHTF 263 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~l--lp~~lr~~~~~~~i~~flH~PfP~~e~f~~-l---p----~r~~il~~l-l~~dligF~t~ 263 (861)
.+| |+|++|..+.+. ++..+-.+..+.|+.+.+|..+.+ .+.. . + ....+-+.+ -.+|.|-..+.
T Consensus 99 ~~~--DvV~~~~~~~~~~~~~~~~~~~~~~~p~v~~~h~~~~~--~~~~~~~~~~~~~~~~~~~e~~~~~~ad~ii~~S~ 174 (371)
T PLN02275 99 PRP--DVFLVQNPPSVPTLAVVKLACWLRRAKFVIDWHNFGYT--LLALSLGRSHPLVRLYRWYERHYGKMADGHLCVTK 174 (371)
T ss_pred CCC--CEEEEeCCCCcHHHHHHHHHHHHhCCCEEEEcCCccHH--HHhcccCCCCHHHHHHHHHHHHHHhhCCEEEECCH
Confidence 466 899999877532 344444444568899999975411 1110 0 0 011111222 23677776666
Q ss_pred HhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCc
Q 002979 264 DYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDM 343 (861)
Q Consensus 264 ~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrl 343 (861)
...+...+ . .|.. +.++|+|+ .+.|.+... . ..++ ...+.++++++|+
T Consensus 175 ~~~~~l~~----~----------------~g~~--i~vi~n~~-~~~f~~~~~-----~--~~~~--~~~~~~i~~~grl 222 (371)
T PLN02275 175 AMQHELDQ----N----------------WGIR--ATVLYDQP-PEFFRPASL-----E--IRLR--PNRPALVVSSTSW 222 (371)
T ss_pred HHHHHHHH----h----------------cCCC--eEEECCCC-HHHcCcCCc-----h--hccc--CCCcEEEEEeCce
Confidence 55544332 0 0111 56778884 455542110 0 1111 1235678899999
Q ss_pred ccccCHHHHHHHHHHHHH-----------------hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCC
Q 002979 344 DIFKGISLKLLAMEQLLQ-----------------QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGS 406 (861)
Q Consensus 344 d~~KGi~~~l~Af~~ll~-----------------~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~ 406 (861)
.+.||+..+++|+..+.. ++|+ +.|+.+| +|++.+++++++.+
T Consensus 223 ~~~k~~~~li~a~~~l~~~~~~~~~~~~~~~~~~~~~~~----i~l~ivG-----~G~~~~~l~~~~~~----------- 282 (371)
T PLN02275 223 TPDEDFGILLEAAVMYDRRVAARLNESDSASGKQSLYPR----LLFIITG-----KGPQKAMYEEKISR----------- 282 (371)
T ss_pred eccCCHHHHHHHHHHHHhhhhhccccccccccccccCCC----eEEEEEe-----CCCCHHHHHHHHHH-----------
Confidence 999999999999988752 3455 4598888 45555556555543
Q ss_pred CCcccEEEEcCCCCHHHHHHHHHhcccceecc---cccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC
Q 002979 407 PNYEPVVLIDRPVPRFEKSAYYAVAECCIVNA---VRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG 483 (861)
Q Consensus 407 ~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS---~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (861)
.+...++++.+.++.+++..+|+.||+||+|+ ..|||+++.+||||| +.|+|+|..+|
T Consensus 283 ~~l~~v~~~~~~~~~~~~~~~l~~aDv~v~~~~s~~~e~~p~~llEAmA~-------------------G~PVVa~~~gg 343 (371)
T PLN02275 283 LNLRHVAFRTMWLEAEDYPLLLGSADLGVSLHTSSSGLDLPMKVVDMFGC-------------------GLPVCAVSYSC 343 (371)
T ss_pred cCCCceEEEcCCCCHHHHHHHHHhCCEEEEeccccccccccHHHHHHHHC-------------------CCCEEEecCCC
Confidence 23345777777899999999999999999853 348999999999999 45689999888
Q ss_pred CcccCC---CceEeCCCCHHHHHHHHHHHh
Q 002979 484 CSPSLS---GAIRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 484 ~~~~l~---~ai~vnP~d~~~~A~ai~~aL 510 (861)
..+.+. .|++|+ |++++|++|.++|
T Consensus 344 ~~eiv~~g~~G~lv~--~~~~la~~i~~l~ 371 (371)
T PLN02275 344 IGELVKDGKNGLLFS--SSSELADQLLELL 371 (371)
T ss_pred hHHHccCCCCeEEEC--CHHHHHHHHHHhC
Confidence 887772 478886 6999999998765
No 110
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=99.63 E-value=2.5e-14 Score=163.23 Aligned_cols=292 Identities=18% Similarity=0.172 Sum_probs=194.7
Q ss_pred CEEEEeCcccccHHHHHHhh---cCCCeEEEEEecC-----CC-ChHHHhcCCc---h----------HHHHHHhhcCCE
Q 002979 200 DCVWVHDYHLMVLPTFLRKR---FNRIKLGFFLHSP-----FP-SSEIYRTLPV---R----------DEILRGLLNCDL 257 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~---~~~~~i~~flH~P-----fP-~~e~f~~lp~---r----------~~il~~ll~~dl 257 (861)
|+|++||||.-|+|.++++. ...++..|+.|-= || ...-.-.||. . .-+--|+..+|.
T Consensus 132 DIvH~hDWqt~L~~~~lk~~~~~~~~i~tVfTIHNl~~qG~~~~~~~~~lgLp~~~~~~~~l~~~~~~~~lK~gi~~ad~ 211 (487)
T COG0297 132 DIVHAHDWQTGLLPAYLKQRYRSGYIIPTVFTIHNLAYQGLFRLQYLEELGLPFEAYASFGLEFYGQISFLKGGLYYADA 211 (487)
T ss_pred CEEEeecHHHHHHHHHHhhcccccccCCeEEEEeeceeecccchhhHHHhcCCHHHhhhceeeecCcchhhhhhheeccE
Confidence 99999999999999999997 7789999999932 23 1122223441 1 234446667777
Q ss_pred EeecChHhHHHHHHHHHHHhCCccccCCCee-eEEecCeEEEEEEecccCCchHHHHhhCC-----------chhHHHHH
Q 002979 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGHI-GLDYFGRTVYIKILPVGVHMGRLESVLNL-----------PATATKIK 325 (861)
Q Consensus 258 igF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~-~~~~~gr~~~i~v~p~GId~~~~~~~~~~-----------~~~~~~~~ 325 (861)
|.--++.|+..-... ..| .|.. .+.+ +.-.+.-+=+|||.....+.... +.-.....
T Consensus 212 vttVSptYa~Ei~t~---~~g------~gl~g~l~~--~~~~l~GI~NgiD~~~wnp~~d~~~~~~y~~~~~~~k~~nk~ 280 (487)
T COG0297 212 VTTVSPTYAGEIYTP---EYG------EGLEGLLSW--RSGKLSGILNGIDYDLWNPETDPYIAANYSAEVLPAKAENKV 280 (487)
T ss_pred EEEECHHHHHhhccc---ccc------ccchhhhhh--ccccEEEEEeeEEecccCcccccchhccCCccchhhhHHHHH
Confidence 777777777654410 000 0000 0111 11234444567776544321100 01112233
Q ss_pred HHHHHc-----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 002979 326 EIEKQF-----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI 400 (861)
Q Consensus 326 ~l~~~~-----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 400 (861)
.|++.+ .+.+++..|+|++..||++.+++|++.++++. ++ ||.+|.+ -.+++..+..+++++
T Consensus 281 ~L~~~~gL~~~~~~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~--~~----~vilG~g-------d~~le~~~~~la~~~ 347 (487)
T COG0297 281 ALQERLGLDVDLPGPLFGFVSRLTAQKGLDLLLEAIDELLEQG--WQ----LVLLGTG-------DPELEEALRALASRH 347 (487)
T ss_pred HHHHHhCCCCCCCCcEEEEeeccccccchhHHHHHHHHHHHhC--ce----EEEEecC-------cHHHHHHHHHHHHhc
Confidence 455555 24689999999999999999999999999987 55 7878743 156777888888877
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEecc
Q 002979 401 NEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSE 480 (861)
Q Consensus 401 N~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se 480 (861)
..++ .+.-..+..-...+|..||++++||..|++||+-+++|.- ++++|+.+
T Consensus 348 ~~~~---------~~~i~~~~~la~~i~agaD~~lmPSrfEPcGL~ql~amry-------------------GtvpIv~~ 399 (487)
T COG0297 348 PGRV---------LVVIGYDEPLAHLIYAGADVILMPSRFEPCGLTQLYAMRY-------------------GTLPIVRE 399 (487)
T ss_pred CceE---------EEEeeecHHHHHHHHhcCCEEEeCCcCcCCcHHHHHHHHc-------------------CCcceEcc
Confidence 5432 2333345556678999999999999999999999999997 67899999
Q ss_pred CCCCcccCC-----------CceEeCCCCHHHHHHHHHHHhcCC---HH-HHHHHHHHhhhhhccCCHhHHHHHHHHHHH
Q 002979 481 FIGCSPSLS-----------GAIRVNPWDIDAVADAMTLAINMR---DS-EKQLRHEKHYRYVSTHDVAYWARSFAQDLE 545 (861)
Q Consensus 481 ~~G~~~~l~-----------~ai~vnP~d~~~~A~ai~~aL~m~---~~-e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~ 545 (861)
.+|.++.+. .|+++.|.|.++++.||.+|+..- +. -+..+..+|. ...++..=+.++..-.+
T Consensus 400 tGGLadTV~~~~~~~~~~~gtGf~f~~~~~~~l~~al~rA~~~y~~~~~~w~~~~~~~m~---~d~sw~~sa~~y~~lY~ 476 (487)
T COG0297 400 TGGLADTVVDRNEWLIQGVGTGFLFLQTNPDHLANALRRALVLYRAPPLLWRKVQPNAMG---ADFSWDLSAKEYVELYK 476 (487)
T ss_pred cCCccceecCccchhccCceeEEEEecCCHHHHHHHHHHHHHHhhCCHHHHHHHHHhhcc---cccCchhHHHHHHHHHH
Confidence 999998883 268888889999999999998753 22 2222222332 34555666666655444
Q ss_pred H
Q 002979 546 R 546 (861)
Q Consensus 546 ~ 546 (861)
.
T Consensus 477 ~ 477 (487)
T COG0297 477 P 477 (487)
T ss_pred H
Confidence 4
No 111
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=99.57 E-value=7.2e-15 Score=146.91 Aligned_cols=143 Identities=25% Similarity=0.379 Sum_probs=111.8
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHh-CCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002979 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ-HPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~-~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
.++++|++++|+++.||+..+++|+..+.++ .|++. |+.+|. ++....++..+. .. +..
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~----l~i~G~-----~~~~~~~~~~~~----~~-------~~~ 72 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYK----LVIVGD-----GEYKKELKNLIE----KL-------NLK 72 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEE----EEEESH-----CCHHHHHHHHHH----HT-------TCG
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeE----EEEEcc-----cccccccccccc----cc-------ccc
Confidence 6789999999999999999999999999875 66654 777772 222233333332 21 222
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-
Q 002979 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS- 489 (861)
Q Consensus 411 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~- 489 (861)
..+.+.+.++.+++.++|+.||++|.||..||+|++++|||+| +.|+|+|..+|..+.+.
T Consensus 73 ~~i~~~~~~~~~~l~~~~~~~di~v~~s~~e~~~~~~~Ea~~~-------------------g~pvI~~~~~~~~e~~~~ 133 (172)
T PF00534_consen 73 ENIIFLGYVPDDELDELYKSSDIFVSPSRNEGFGLSLLEAMAC-------------------GCPVIASDIGGNNEIIND 133 (172)
T ss_dssp TTEEEEESHSHHHHHHHHHHTSEEEE-BSSBSS-HHHHHHHHT-------------------T-EEEEESSTHHHHHSGT
T ss_pred ccccccccccccccccccccceecccccccccccccccccccc-------------------ccceeeccccCCceeecc
Confidence 3345566777999999999999999999999999999999999 66799999777777772
Q ss_pred --CceEeCCCCHHHHHHHHHHHhcCC
Q 002979 490 --GAIRVNPWDIDAVADAMTLAINMR 513 (861)
Q Consensus 490 --~ai~vnP~d~~~~A~ai~~aL~m~ 513 (861)
.|++++|.|+++++++|.+++..+
T Consensus 134 ~~~g~~~~~~~~~~l~~~i~~~l~~~ 159 (172)
T PF00534_consen 134 GVNGFLFDPNDIEELADAIEKLLNDP 159 (172)
T ss_dssp TTSEEEESTTSHHHHHHHHHHHHHHH
T ss_pred ccceEEeCCCCHHHHHHHHHHHHCCH
Confidence 368999999999999999999855
No 112
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=99.51 E-value=8.3e-13 Score=149.34 Aligned_cols=267 Identities=13% Similarity=0.110 Sum_probs=167.2
Q ss_pred cCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc-hHHHHHHhhcCCEEeecChHhHHHHHHHH
Q 002979 195 INPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV-RDEILRGLLNCDLIGFHTFDYARHFLSCC 273 (861)
Q Consensus 195 ~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~-r~~il~~ll~~dligF~t~~~~~~Fl~~~ 273 (861)
.+.++.++|.+..-...+... .+..++.+-+|-.|+..... -+. ....-..+-.||+|-..+....+++..
T Consensus 99 ~~~~~~i~~~~~P~~~~~~~~----~~~~~~Vyd~~D~~~~~~~~--~~~~~~~e~~~~~~ad~vi~~S~~l~~~~~~-- 170 (373)
T cd04950 99 LGFGRPILWYYTPYTLPVAAL----LQASLVVYDCVDDLSAFPGG--PPELLEAERRLLKRADLVFTTSPSLYEAKRR-- 170 (373)
T ss_pred cCCCCcEEEEeCccHHHHHhh----cCCCeEEEEcccchhccCCC--CHHHHHHHHHHHHhCCEEEECCHHHHHHHhh--
Confidence 355557899886555544444 45677888877655432211 000 111223345689888777655543221
Q ss_pred HHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCHHHHH
Q 002979 274 SRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGISLKL 353 (861)
Q Consensus 274 ~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi~~~l 353 (861)
+ + .++.++|+|+|.+.|......+.. .+.+ ...++++|+++|+++..+++. +|
T Consensus 171 ------------------~-~--~~i~~i~ngvd~~~f~~~~~~~~~---~~~~--~~~~~~~i~y~G~l~~~~d~~-ll 223 (373)
T cd04950 171 ------------------L-N--PNVVLVPNGVDYEHFAAARDPPPP---PADL--AALPRPVIGYYGAIAEWLDLE-LL 223 (373)
T ss_pred ------------------C-C--CCEEEcccccCHHHhhcccccCCC---hhHH--hcCCCCEEEEEeccccccCHH-HH
Confidence 1 1 246779999999999643221110 1111 114678999999999966654 33
Q ss_pred HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhccc
Q 002979 354 LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAEC 433 (861)
Q Consensus 354 ~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv 433 (861)
. .+.+.+|+++ |+.||... . . .+. .+ + .. .+-+.+.|.++.+++.++|+.||+
T Consensus 224 ~---~la~~~p~~~----~vliG~~~--~-~--~~~-~~-------~------~~-~~nV~~~G~~~~~~l~~~l~~~Dv 276 (373)
T cd04950 224 E---ALAKARPDWS----FVLIGPVD--V-S--IDP-SA-------L------LR-LPNVHYLGPKPYKELPAYLAGFDV 276 (373)
T ss_pred H---HHHHHCCCCE----EEEECCCc--C-c--cCh-hH-------h------cc-CCCEEEeCCCCHHHHHHHHHhCCE
Confidence 3 3445678876 88888431 0 0 111 00 0 01 134567789999999999999999
Q ss_pred ceeccc-----ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHH
Q 002979 434 CIVNAV-----RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTL 508 (861)
Q Consensus 434 ~vvtS~-----~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~ 508 (861)
+++|+. +.++++..+|||||+ .|+|+|.+.++.+. .++..+.+.|.++++++|.+
T Consensus 277 ~l~P~~~~~~~~~~~P~Kl~EylA~G-------------------~PVVat~~~~~~~~-~~~~~~~~~d~~~~~~ai~~ 336 (373)
T cd04950 277 AILPFRLNELTRATSPLKLFEYLAAG-------------------KPVVATPLPEVRRY-EDEVVLIADDPEEFVAAIEK 336 (373)
T ss_pred EecCCccchhhhcCCcchHHHHhccC-------------------CCEEecCcHHHHhh-cCcEEEeCCCHHHHHHHHHH
Confidence 999985 457789999999994 45787776554433 33444556799999999999
Q ss_pred HhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHH
Q 002979 509 AINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (861)
Q Consensus 509 aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 546 (861)
+|..+..++..+. .+.+.+|++..-++.+++.|..
T Consensus 337 ~l~~~~~~~~~~~---~~~~~~~sW~~~a~~~~~~l~~ 371 (373)
T cd04950 337 ALLEDGPARERRR---LRLAAQNSWDARAAEMLEALQE 371 (373)
T ss_pred HHhcCCchHHHHH---HHHHHHCCHHHHHHHHHHHHHh
Confidence 8865544333322 2267789998888888866553
No 113
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.45 E-value=8.4e-13 Score=130.63 Aligned_cols=203 Identities=18% Similarity=0.172 Sum_probs=123.1
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc--cCCceEecCcEEEEeCC
Q 002979 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC--EMLGIAAEHGYFIRWNK 666 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~--~~lgliaenG~~i~~~~ 666 (861)
.+.++||+|+||||++ ....+ +.....+.+| ++.|..|+++|..+..++..+-..+ +.+++++|||+.|+.+.
T Consensus 5 ~~~~lIFtDlD~TLl~---~~ye~-~pA~pv~~el-~d~G~~Vi~~SSKT~aE~~~l~~~l~v~~~p~iaEnG~aI~~p~ 79 (274)
T COG3769 5 QMPLLIFTDLDGTLLP---HSYEW-QPAAPVLLEL-KDAGVPVILCSSKTRAEMLYLQKSLGVQGLPLIAENGAAIYLPK 79 (274)
T ss_pred ccceEEEEcccCcccC---CCCCC-CccchHHHHH-HHcCCeEEEeccchHHHHHHHHHhcCCCCCceeecCCceEEecc
Confidence 4679999999999999 22222 2334466666 6889999999999999888877664 45789999999998764
Q ss_pred cce-EEecC------CccChH-HHHHHHHHHHHHhhcCCCceEeeccc--eeEee-----------eccCCccchhccHH
Q 002979 667 TSE-WETNH------LGADLE-WKKIVEPVMRSYTEATDGSNIEIKES--ALVWH-----------HQDADPDFGSCQAK 725 (861)
Q Consensus 667 ~~~-~~~~~------~~~~~~-w~~~v~~i~~~y~~~~~gs~ie~k~~--~l~~~-----------~~~~d~~~~~~~a~ 725 (861)
+-. +.... ...... -.+.+++.++...+...-.++.+-.. ...|. -+.....+..+..+
T Consensus 80 ~~~~~~~~~r~~~g~~~~elg~~l~~ire~l~kLee~~g~~~~~~~d~~ei~e~TGlpre~aaLa~~rEyseti~~rs~d 159 (274)
T COG3769 80 GWFPFDGKPREISGISHIELGKVLEKIREKLDKLEEHFGFTTFDDVDDEEIAEWTGLPREQAALAMLREYSETIIWRSSD 159 (274)
T ss_pred cccccCCCCceecceEeeehhhhHHHHHHHHHHHHHHhCeeEeccCCHHHHHHHhCCChHHhHHHHHHHhhhheeecccc
Confidence 311 10000 000110 01122222222211111111110000 00000 00000000111223
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+...++...+...++.++.|..+..+......||.|++++++.+...+. ..-++++||+.||.+||+....
T Consensus 160 ~~~~~~~~~L~e~glt~v~garf~~v~~as~gKg~Aa~~ll~~y~rl~~-~r~t~~~GDg~nD~Pl~ev~d~ 230 (274)
T COG3769 160 ERMAQFTARLNERGLTFVHGARFWHVLDASAGKGQAANWLLETYRRLGG-ARTTLGLGDGPNDAPLLEVMDY 230 (274)
T ss_pred hHHHHHHHHHHhcCceEEeccceEEEeccccCccHHHHHHHHHHHhcCc-eeEEEecCCCCCcccHHHhhhh
Confidence 4555666677777888999999989999988999999999998743332 2359999999999999999985
No 114
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=99.44 E-value=2.1e-13 Score=144.22 Aligned_cols=201 Identities=17% Similarity=0.149 Sum_probs=147.3
Q ss_pred HHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccCHHH
Q 002979 273 CSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISL 351 (861)
Q Consensus 273 ~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~ 351 (861)
..|.+.+++.++.+.+ +.-.-..-+|.++|+-++...|.+.... +. .+...|+.++||-+.||+++
T Consensus 146 id~~IcVshtskentv-lr~~L~p~kvsvIPnAv~~~~f~P~~~~------------~~S~~i~~ivv~sRLvyrKGiDl 212 (426)
T KOG1111|consen 146 IDRIICVSHTSKENTV-LRGALAPAKVSVIPNAVVTHTFTPDAAD------------KPSADIITIVVASRLVYRKGIDL 212 (426)
T ss_pred CCcEEEEeecCCCceE-EEeccCHhHeeeccceeeccccccCccc------------cCCCCeeEEEEEeeeeeccchHH
Confidence 3455566777766542 2222234478999999999999753221 22 45588999999999999999
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 002979 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (861)
Q Consensus 352 ~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 431 (861)
++....++-++||+.+ ++.+| +||....+++-+++. ..+..+-+.|.++++++-..|...
T Consensus 213 l~~iIp~vc~~~p~vr----fii~G-----DGPk~i~lee~lEk~-----------~l~~rV~~lG~v~h~~Vr~vl~~G 272 (426)
T KOG1111|consen 213 LLEIIPSVCDKHPEVR----FIIIG-----DGPKRIDLEEMLEKL-----------FLQDRVVMLGTVPHDRVRDVLVRG 272 (426)
T ss_pred HHHHHHHHHhcCCCee----EEEec-----CCcccchHHHHHHHh-----------hccCceEEecccchHHHHHHHhcC
Confidence 9999999999999988 88777 666544454444432 122455677899999999999999
Q ss_pred ccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCc-eEeCCCCHHHHHHHHHHHh
Q 002979 432 ECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGA-IRVNPWDIDAVADAMTLAI 510 (861)
Q Consensus 432 Dv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-i~vnP~d~~~~A~ai~~aL 510 (861)
|+|+.||+.|.|+++..||+.| |-++|.+..+|..+.|... +..-+-.++++++++.+|+
T Consensus 273 ~IFlntSlTEafc~~ivEAaSc-------------------GL~VVsTrVGGIpeVLP~d~i~~~~~~~~dl~~~v~~ai 333 (426)
T KOG1111|consen 273 DIFLNTSLTEAFCMVIVEAASC-------------------GLPVVSTRVGGIPEVLPEDMITLGEPGPDDLVGAVEKAI 333 (426)
T ss_pred cEEeccHHHHHHHHHHHHHHhC-------------------CCEEEEeecCCccccCCccceeccCCChHHHHHHHHHHH
Confidence 9999999999999999999999 3446777777777777443 5456668899999999988
Q ss_pred cCC---HHHHHHHHHHhh
Q 002979 511 NMR---DSEKQLRHEKHY 525 (861)
Q Consensus 511 ~m~---~~e~~~r~~~~~ 525 (861)
+.- +++...|.+++|
T Consensus 334 ~~~~~~p~~~h~~v~~~y 351 (426)
T KOG1111|consen 334 TKLRTLPLEFHDRVKKMY 351 (426)
T ss_pred HHhccCchhHHHHHHHhc
Confidence 632 233344444444
No 115
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.35 E-value=7.2e-11 Score=134.03 Aligned_cols=190 Identities=11% Similarity=0.094 Sum_probs=122.3
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCHHHHHHHHHHHHHh----CCCCCCcE
Q 002979 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGISLKLLAMEQLLQQ----HPGMRGKV 370 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~----~P~~~~~v 370 (861)
+|.+++++|+...+.. +. ....+++++ .++++|+.+||....||+...++++..++.. .|+.+
T Consensus 174 ki~v~g~~v~~~f~~~----~~---~~~~~r~~~gl~~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~--- 243 (382)
T PLN02605 174 QIRVYGLPIRPSFARA----VR---PKDELRRELGMDEDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQ--- 243 (382)
T ss_pred HEEEECcccCHhhccC----CC---CHHHHHHHcCCCCCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCce---
Confidence 4455677887643321 11 123456666 4688999999999999999999999876521 34332
Q ss_pred EEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceee
Q 002979 371 VLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKY 450 (861)
Q Consensus 371 vLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea 450 (861)
.++++| +++ ++++++.+... ...+.+.|.++ ++..||++||++|.+| .++++.||
T Consensus 244 ~~vi~G-----~~~---~~~~~L~~~~~-----------~~~v~~~G~~~--~~~~l~~aaDv~V~~~----g~~ti~EA 298 (382)
T PLN02605 244 VVVICG-----RNK---KLQSKLESRDW-----------KIPVKVRGFVT--NMEEWMGACDCIITKA----GPGTIAEA 298 (382)
T ss_pred EEEEEC-----CCH---HHHHHHHhhcc-----------cCCeEEEeccc--cHHHHHHhCCEEEECC----CcchHHHH
Confidence 233343 222 22333332210 01234666664 7999999999999866 37899999
Q ss_pred eeeecCCCcccccccCCCCCCCCceEEeccCC-----CCcccC-CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHh
Q 002979 451 IVCRQGTPIMDEALGRERDSPHTSMLVVSEFI-----GCSPSL-SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKH 524 (861)
Q Consensus 451 ~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~-----G~~~~l-~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~ 524 (861)
|+| +.|+|++... |.++.+ .++.-+.+.|+++++++|.+++..+++.++.+.++.
T Consensus 299 ma~-------------------g~PvI~~~~~pgqe~gn~~~i~~~g~g~~~~~~~~la~~i~~ll~~~~~~~~~m~~~~ 359 (382)
T PLN02605 299 LIR-------------------GLPIILNGYIPGQEEGNVPYVVDNGFGAFSESPKEIARIVAEWFGDKSDELEAMSENA 359 (382)
T ss_pred HHc-------------------CCCEEEecCCCccchhhHHHHHhCCceeecCCHHHHHHHHHHHHcCCHHHHHHHHHHH
Confidence 999 4558888752 333434 333344468999999999999986455666666777
Q ss_pred hhhhccCCHhHHHHHHH
Q 002979 525 YRYVSTHDVAYWARSFA 541 (861)
Q Consensus 525 ~~~v~~~~~~~W~~~fl 541 (861)
+++...+....-++.++
T Consensus 360 ~~~~~~~a~~~i~~~l~ 376 (382)
T PLN02605 360 LKLARPEAVFDIVHDLH 376 (382)
T ss_pred HHhcCCchHHHHHHHHH
Confidence 77776676655555444
No 116
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.21 E-value=3.3e-10 Score=127.88 Aligned_cols=186 Identities=14% Similarity=0.124 Sum_probs=140.7
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCC-CcEEEEEEecC-CCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002979 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMR-GKVVLVQIVNP-ARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~-~~vvLvqi~~p-~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
..++..+.|+.+-||+...|.||..+...-|+.. ....++..+++ +.+...+..++.+++.+++++.+ -+..
T Consensus 273 d~~~~siN~~~pgkd~~l~l~a~~~~~~~i~~~~~~~~hl~~~g~~G~d~~~sen~~~~~el~~lie~~~------l~g~ 346 (495)
T KOG0853|consen 273 DRFFPSINRFEPGKDQDLALPAFTLLHDSIPEPSISSEHLVVAGSRGYDERDSENVEYLKELLSLIEEYD------LLGQ 346 (495)
T ss_pred ceEeeeeeecCCCCCceeehhhHHhhhcccCCCCCCceEEEEecCCCccccchhhHHHHHHHHHHHHHhC------ccCc
Confidence 6789999999999999999999999988776511 12344444433 33444555566677777777642 1235
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--- 488 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 488 (861)
.++|..+.++.+.+.+++.+.+..+++..|.||+|++|||+| +-|+|++..+|..+.+
T Consensus 347 ~v~~~~s~~~~~~yrl~adt~~v~~qPa~E~FGiv~IEAMa~-------------------glPvvAt~~GGP~EiV~~~ 407 (495)
T KOG0853|consen 347 FVWFLPSTTRVAKYRLAADTKGVLYQPANEHFGIVPIEAMAC-------------------GLPVVATNNGGPAEIVVHG 407 (495)
T ss_pred eEEEecCCchHHHHHHHHhcceEEecCCCCCccceeHHHHhc-------------------CCCEEEecCCCceEEEEcC
Confidence 778877888888888888888888999999999999999999 4569999999999998
Q ss_pred CCceEeCCCCHH---HHHHHHHHHhcCCHHHHHHHHHHhhhhhcc-CCHhHHHHHHHHHHHHHHHh
Q 002979 489 SGAIRVNPWDID---AVADAMTLAINMRDSEKQLRHEKHYRYVST-HDVAYWARSFAQDLERACRD 550 (861)
Q Consensus 489 ~~ai~vnP~d~~---~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~-~~~~~W~~~fl~~l~~~~~~ 550 (861)
..|++++| +.+ .+|++|.+..+.+. .+....++.++.|.+ +++ +.|.+.+.....+
T Consensus 408 ~tG~l~dp-~~e~~~~~a~~~~kl~~~p~-l~~~~~~~G~~rV~e~fs~----~~~~~ri~~~~~~ 467 (495)
T KOG0853|consen 408 VTGLLIDP-GQEAVAELADALLKLRRDPE-LWARMGKNGLKRVKEMFSW----QHYSERIASVLGK 467 (495)
T ss_pred CcceeeCC-chHHHHHHHHHHHHHhcCHH-HHHHHHHHHHHHHHHHHhH----HHHHHHHHHHhHh
Confidence 35999999 676 59999999998554 477778888888877 555 5555555554443
No 117
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.21 E-value=1.7e-10 Score=118.94 Aligned_cols=111 Identities=15% Similarity=0.174 Sum_probs=81.1
Q ss_pred eecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCC
Q 002979 339 GIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRP 418 (861)
Q Consensus 339 ~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~ 418 (861)
++||+.+.||+...++|+..+.+++|+++ ++.+|... +....+..+.. .+...-+.+.+.
T Consensus 109 ~~g~~~~~k~~~~~~~a~~~l~~~~~~~~----~~i~G~~~-----~~~~~~~~~~~-----------~~~~~~v~~~~~ 168 (229)
T cd01635 109 FVGRLAPEKGLDDLIEAFALLKERGPDLK----LVIAGDGP-----EREYLEELLAA-----------LLLLDRVIFLGG 168 (229)
T ss_pred EEEeecccCCHHHHHHHHHHHHHhCCCeE----EEEEeCCC-----ChHHHHHHHHh-----------cCCcccEEEeCC
Confidence 89999999999999999999998888765 88888432 11111111111 112233445555
Q ss_pred C-CHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC
Q 002979 419 V-PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (861)
Q Consensus 419 v-~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (861)
+ +.+++..+++.||+++.||..||++.+.+|||+| +.|+|+|+..|..+.+
T Consensus 169 ~~~~~~~~~~~~~~di~l~~~~~e~~~~~~~Eam~~-------------------g~pvi~s~~~~~~e~i 220 (229)
T cd01635 169 LDPEELLALLLAAADVFVLPSLREGFGLVVLEAMAC-------------------GLPVIATDVGGPPEIV 220 (229)
T ss_pred CCcHHHHHHHhhcCCEEEecccccCcChHHHHHHhC-------------------CCCEEEcCCCCcceEE
Confidence 5 5566666777799999999999999999999999 4568999998877655
No 118
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=99.14 E-value=7.6e-10 Score=120.08 Aligned_cols=197 Identities=20% Similarity=0.267 Sum_probs=139.7
Q ss_pred EEEEecccCCchHHHHhhCCchhHHHHHHHHHH-cCC--CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE
Q 002979 298 YIKILPVGVHMGRLESVLNLPATATKIKEIEKQ-FDG--KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ 374 (861)
Q Consensus 298 ~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~-~~~--~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq 374 (861)
.+.+.|.|++...+... +.. ... +.++++++|+++.||+...++|+..+.+..++ +.++.
T Consensus 173 ~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~i~~~g~~~~~k~~~~~i~~~~~~~~~~~~----~~~~~ 235 (381)
T COG0438 173 KIVVIPNGIDTEKFAPA-------------RIGLLPEGGKFVVLYVGRLDPEKGLDLLIEAAAKLKKRGPD----IKLVI 235 (381)
T ss_pred CceEecCCcCHHHcCcc-------------ccCCCcccCceEEEEeeccChhcCHHHHHHHHHHhhhhcCC----eEEEE
Confidence 56678999999877531 000 112 47899999999999999999999999887766 34676
Q ss_pred EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeee
Q 002979 375 IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 375 i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+|..... ...+.. ++.+.+ ..+.+.+.+.++.+++..+|+.||++++||..||+|++.+|||+|
T Consensus 236 ~g~~~~~----~~~~~~----~~~~~~-------~~~~v~~~g~~~~~~~~~~~~~~~~~v~ps~~e~~~~~~~Ea~a~- 299 (381)
T COG0438 236 VGDGPER----REELEK----LAKKLG-------LEDNVKFLGYVPDEELAELLASADVFVLPSLSEGFGLVLLEAMAA- 299 (381)
T ss_pred EcCCCcc----HHHHHH----HHHHhC-------CCCcEEEecccCHHHHHHHHHhCCEEEeccccccchHHHHHHHhc-
Confidence 6643211 122222 332221 124555688888889999999999999999999999999999999
Q ss_pred cCCCcccccccCCCCCCCCceEEeccCCCCcccCCC---ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhh-cc
Q 002979 455 QGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSG---AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYV-ST 530 (861)
Q Consensus 455 ~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~---ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v-~~ 530 (861)
+.|+|+|...|..+.+.. ++++++.|.+++++++..+++++ +.++...+..++.+ ..
T Consensus 300 ------------------g~pvi~~~~~~~~e~~~~~~~g~~~~~~~~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~~~~ 360 (381)
T COG0438 300 ------------------GTPVIASDVGGIPEVVEDGETGLLVPPGDVEELADALEQLLEDP-ELREELGEAARERVEEE 360 (381)
T ss_pred ------------------CCcEEECCCCChHHHhcCCCceEecCCCCHHHHHHHHHHHhcCH-HHHHHHHHHHHHHHHHh
Confidence 456899999988888843 77888888999999999999877 33333333233333 45
Q ss_pred CCHhHHHHHHHHHHHH
Q 002979 531 HDVAYWARSFAQDLER 546 (861)
Q Consensus 531 ~~~~~W~~~fl~~l~~ 546 (861)
+++..-+..+..-+..
T Consensus 361 ~~~~~~~~~~~~~~~~ 376 (381)
T COG0438 361 FSWERIAEQLLELYEE 376 (381)
T ss_pred cCHHHHHHHHHHHHHH
Confidence 6666666555554444
No 119
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.12 E-value=7.7e-09 Score=117.28 Aligned_cols=274 Identities=11% Similarity=0.059 Sum_probs=158.1
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEe
Q 002979 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIG 259 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dlig 259 (861)
+...+..-..++++..+| |+|..| +....++.+.+.+..++++....+-..+. ...+.+ .+|.+-
T Consensus 88 ~~~~~~~~l~~~l~~~~p--D~Vi~~-~~~~~~~~~~~~~~~~ip~~~~~td~~~~---------~~~~~~---~ad~i~ 152 (380)
T PRK13609 88 YANFGRKRLKLLLQAEKP--DIVINT-FPIIAVPELKKQTGISIPTYNVLTDFCLH---------KIWVHR---EVDRYF 152 (380)
T ss_pred HHHHHHHHHHHHHHHhCc--CEEEEc-ChHHHHHHHHHhcCCCCCeEEEeCCCCCC---------cccccC---CCCEEE
Confidence 344444555677777788 888885 66667887776666667765333211111 011111 589888
Q ss_pred ecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCch-HHHHhhCCchhHHHHHHHHHHc---CCCe
Q 002979 260 FHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMG-RLESVLNLPATATKIKEIEKQF---DGKK 335 (861)
Q Consensus 260 F~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~-~~~~~~~~~~~~~~~~~l~~~~---~~~~ 335 (861)
..+....+.+.+ .|+.. .+|.++ |++.. .|... .. ...+++++ ++++
T Consensus 153 ~~s~~~~~~l~~-----~gi~~---------------~ki~v~--G~p~~~~f~~~---~~----~~~~~~~~~l~~~~~ 203 (380)
T PRK13609 153 VATDHVKKVLVD-----IGVPP---------------EQVVET--GIPIRSSFELK---IN----PDIIYNKYQLCPNKK 203 (380)
T ss_pred ECCHHHHHHHHH-----cCCCh---------------hHEEEE--CcccChHHcCc---CC----HHHHHHHcCCCCCCc
Confidence 777654444332 13210 122222 33332 23211 11 12245554 2444
Q ss_pred -EEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002979 336 -LILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (861)
Q Consensus 336 -vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~ 414 (861)
+++..|++...||+...++++.+ .|+++ ++.+++. +++ +++++++++++. + ..| .
T Consensus 204 ~il~~~G~~~~~k~~~~li~~l~~----~~~~~----~viv~G~---~~~----~~~~l~~~~~~~----~----~~v-~ 259 (380)
T PRK13609 204 ILLIMAGAHGVLGNVKELCQSLMS----VPDLQ----VVVVCGK---NEA----LKQSLEDLQETN----P----DAL-K 259 (380)
T ss_pred EEEEEcCCCCCCcCHHHHHHHHhh----CCCcE----EEEEeCC---CHH----HHHHHHHHHhcC----C----CcE-E
Confidence 56667899999999988888642 35554 6666532 122 333444433321 1 134 4
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccC-CCCc----ccC-
Q 002979 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEF-IGCS----PSL- 488 (861)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~-~G~~----~~l- 488 (861)
+.+.+ +++..+|+.||++|. ++.|++.+|||+|+ .|+|++.. .|.. ..+
T Consensus 260 ~~g~~--~~~~~l~~~aD~~v~----~~gg~t~~EA~a~g-------------------~PvI~~~~~~g~~~~n~~~~~ 314 (380)
T PRK13609 260 VFGYV--ENIDELFRVTSCMIT----KPGGITLSEAAALG-------------------VPVILYKPVPGQEKENAMYFE 314 (380)
T ss_pred EEech--hhHHHHHHhccEEEe----CCCchHHHHHHHhC-------------------CCEEECCCCCCcchHHHHHHH
Confidence 44665 468899999999874 44589999999994 45777653 3321 112
Q ss_pred CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHH
Q 002979 489 SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERA 547 (861)
Q Consensus 489 ~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~ 547 (861)
..+..+.+.|.++++++|.++++. ++.+..+.++.+++...++....++.+++.+...
T Consensus 315 ~~G~~~~~~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~i~~~~~~~ 372 (380)
T PRK13609 315 RKGAAVVIRDDEEVFAKTEALLQD-DMKLLQMKEAMKSLYLPEPADHIVDDILAENHVE 372 (380)
T ss_pred hCCcEEEECCHHHHHHHHHHHHCC-HHHHHHHHHHHHHhCCCchHHHHHHHHHHhhhhh
Confidence 234445568999999999999984 3444455556666667788888888877666543
No 120
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=99.12 E-value=4.5e-09 Score=118.52 Aligned_cols=251 Identities=15% Similarity=0.136 Sum_probs=144.9
Q ss_pred HHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCEEeecC
Q 002979 185 KIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDLIGFHT 262 (861)
Q Consensus 185 ~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dligF~t 262 (861)
..|++. ++..+| |+|++|......+...+-.+..++|+...-+- .-+.+.+. |+.+++.+-+. -||++--.+
T Consensus 76 ~~l~~~-l~~~~p--Div~~~gd~~~~la~a~aa~~~~ipv~h~~~g-~~s~~~~~--~~~~~~~r~~~~~~ad~~~~~s 149 (365)
T TIGR00236 76 EGLEEL-LLEEKP--DIVLVQGDTTTTLAGALAAFYLQIPVGHVEAG-LRTGDRYS--PMPEEINRQLTGHIADLHFAPT 149 (365)
T ss_pred HHHHHH-HHHcCC--CEEEEeCCchHHHHHHHHHHHhCCCEEEEeCC-CCcCCCCC--CCccHHHHHHHHHHHHhccCCC
Confidence 445543 455677 99999966555555445444456777643221 11111111 12233323222 257666677
Q ss_pred hHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcC-C-CeEEEee
Q 002979 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFD-G-KKLILGI 340 (861)
Q Consensus 263 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~-~-~~vil~V 340 (861)
....+++++ +|+ ...+|.++++|+....+..... + ....+++++. + ..+++..
T Consensus 150 ~~~~~~l~~-----~G~---------------~~~~I~vign~~~d~~~~~~~~-~----~~~~~~~~~~~~~~~vl~~~ 204 (365)
T TIGR00236 150 EQAKDNLLR-----ENV---------------KADSIFVTGNTVIDALLTNVEI-A----YSSPVLSEFGEDKRYILLTL 204 (365)
T ss_pred HHHHHHHHH-----cCC---------------CcccEEEeCChHHHHHHHHHhh-c----cchhHHHhcCCCCCEEEEec
Confidence 766666653 132 1235677888863222221110 0 1123444452 2 3344445
Q ss_pred cCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCC
Q 002979 341 DDMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPV 419 (861)
Q Consensus 341 drld-~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v 419 (861)
.|.. ..||+..+++|+.++.+++|+++ ++.++.|. ++ .+.+ +.+.. + ..+.+.+.+.+
T Consensus 205 hr~~~~~k~~~~ll~a~~~l~~~~~~~~----~vi~~~~~----~~---~~~~---~~~~~----~---~~~~v~~~~~~ 263 (365)
T TIGR00236 205 HRRENVGEPLENIFKAIREIVEEFEDVQ----IVYPVHLN----PV---VREP---LHKHL----G---DSKRVHLIEPL 263 (365)
T ss_pred CchhhhhhHHHHHHHHHHHHHHHCCCCE----EEEECCCC----hH---HHHH---HHHHh----C---CCCCEEEECCC
Confidence 5653 45999999999999998888765 55554332 11 1211 12221 1 11234566788
Q ss_pred CHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-cCCCCcccC-CC-ceEeCC
Q 002979 420 PRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-EFIGCSPSL-SG-AIRVNP 496 (861)
Q Consensus 420 ~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e~~G~~~~l-~~-ai~vnP 496 (861)
+..++..+|+.||+++.+| |.+..|||+|+ .|+|++ ..+|..+.+ .+ ++++ |
T Consensus 264 ~~~~~~~~l~~ad~vv~~S-----g~~~~EA~a~g-------------------~PvI~~~~~~~~~e~~~~g~~~lv-~ 318 (365)
T TIGR00236 264 EYLDFLNLAANSHLILTDS-----GGVQEEAPSLG-------------------KPVLVLRDTTERPETVEAGTNKLV-G 318 (365)
T ss_pred ChHHHHHHHHhCCEEEECC-----hhHHHHHHHcC-------------------CCEEECCCCCCChHHHhcCceEEe-C
Confidence 9999999999999999888 44579999994 447775 445544444 23 4566 6
Q ss_pred CCHHHHHHHHHHHhcC
Q 002979 497 WDIDAVADAMTLAINM 512 (861)
Q Consensus 497 ~d~~~~A~ai~~aL~m 512 (861)
.|+++++++|.++++.
T Consensus 319 ~d~~~i~~ai~~ll~~ 334 (365)
T TIGR00236 319 TDKENITKAAKRLLTD 334 (365)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 8999999999999973
No 121
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.10 E-value=4.3e-09 Score=117.59 Aligned_cols=248 Identities=17% Similarity=0.118 Sum_probs=148.5
Q ss_pred HHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHH
Q 002979 188 ADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYAR 267 (861)
Q Consensus 188 a~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~ 267 (861)
+.++++..+| |+|+.|.... .++..+..+..++++.++-|..||.. . +.++. ..+|.|...+....+
T Consensus 81 ~~~~i~~~~p--DvI~~~~~~~-~~~~~~~a~~~~~p~v~~~~~~~~~~--~------~~~~~--~~~~~vi~~s~~~~~ 147 (350)
T cd03785 81 ARKILKKFKP--DVVVGFGGYV-SGPVGLAAKLLGIPLVIHEQNAVPGL--A------NRLLA--RFADRVALSFPETAK 147 (350)
T ss_pred HHHHHHhcCC--CEEEECCCCc-chHHHHHHHHhCCCEEEEcCCCCccH--H------HHHHH--HhhCEEEEcchhhhh
Confidence 3455666677 8999986544 44555555556677776666555421 0 11111 125666655543222
Q ss_pred HHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcc
Q 002979 268 HFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMD 344 (861)
Q Consensus 268 ~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld 344 (861)
. + ...++.++|+|+|.+.+... + . ++++ .++++++.+++..
T Consensus 148 ~-----------------------~--~~~~~~~i~n~v~~~~~~~~---~----~----~~~~~~~~~~~~i~~~~g~~ 191 (350)
T cd03785 148 Y-----------------------F--PKDKAVVTGNPVREEILALD---R----E----RARLGLRPGKPTLLVFGGSQ 191 (350)
T ss_pred c-----------------------C--CCCcEEEECCCCchHHhhhh---h----h----HHhcCCCCCCeEEEEECCcH
Confidence 1 0 11255678999998766421 0 0 2332 4677888888877
Q ss_pred cccCHHHHH-HHHHHHHHhCCCCCCcEEEE-EEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002979 345 IFKGISLKL-LAMEQLLQQHPGMRGKVVLV-QIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (861)
Q Consensus 345 ~~KGi~~~l-~Af~~ll~~~P~~~~~vvLv-qi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~ 422 (861)
..|+....+ .|++.+.+ ++ +.++ ++| .+ +.+++++.++++ + +.+.+.+.+ +
T Consensus 192 ~~~~~~~~l~~a~~~l~~--~~----~~~~~i~G-----~g-~~~~l~~~~~~~--------~-----~~v~~~g~~--~ 244 (350)
T cd03785 192 GARAINEAVPEALAELLR--KR----LQVIHQTG-----KG-DLEEVKKAYEEL--------G-----VNYEVFPFI--D 244 (350)
T ss_pred hHHHHHHHHHHHHHHhhc--cC----eEEEEEcC-----Cc-cHHHHHHHHhcc--------C-----CCeEEeehh--h
Confidence 788876654 77766632 22 3333 344 22 334444433321 1 223455544 7
Q ss_pred HHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC--------CcccC---CCc
Q 002979 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG--------CSPSL---SGA 491 (861)
Q Consensus 423 el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G--------~~~~l---~~a 491 (861)
++..+|+.||++|.+| | +.+++|||+|+. |+|++...| .++.+ ..+
T Consensus 245 ~~~~~l~~ad~~v~~s---g-~~t~~Eam~~G~-------------------Pvv~~~~~~~~~~~~~~~~~~l~~~g~g 301 (350)
T cd03785 245 DMAAAYAAADLVISRA---G-ASTVAELAALGL-------------------PAILIPLPYAADDHQTANARALVKAGAA 301 (350)
T ss_pred hHHHHHHhcCEEEECC---C-HhHHHHHHHhCC-------------------CEEEeecCCCCCCcHHHhHHHHHhCCCE
Confidence 8999999999999876 3 478999999944 467665433 12333 347
Q ss_pred eEeCCC--CHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhH
Q 002979 492 IRVNPW--DIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAY 535 (861)
Q Consensus 492 i~vnP~--d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~ 535 (861)
++++|. |.++++++|.+++. +++.++...++.++++..+...+
T Consensus 302 ~~v~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~~~~~~~~~~~ 346 (350)
T cd03785 302 VLIPQEELTPERLAAALLELLS-DPERLKAMAEAARSLARPDAAER 346 (350)
T ss_pred EEEecCCCCHHHHHHHHHHHhc-CHHHHHHHHHHHHhcCCCCHHHH
Confidence 889887 89999999999996 45555555666666666554433
No 122
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.09 E-value=3.8e-09 Score=118.59 Aligned_cols=257 Identities=14% Similarity=0.066 Sum_probs=155.9
Q ss_pred HHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHH
Q 002979 190 KVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHF 269 (861)
Q Consensus 190 ~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~F 269 (861)
++++..+| |+|..|.....+ +..+..+....|+.++.|..+|.. -+.++- -.+|.+-..+..- +
T Consensus 85 ~~ik~~~p--Dvv~~~~~~~~~-~~~~~~~~~~~p~v~~~~~~~~~~--------~~r~~~--~~~d~ii~~~~~~---~ 148 (357)
T PRK00726 85 KILKRFKP--DVVVGFGGYVSG-PGGLAARLLGIPLVIHEQNAVPGL--------ANKLLA--RFAKKVATAFPGA---F 148 (357)
T ss_pred HHHHhcCC--CEEEECCCcchh-HHHHHHHHcCCCEEEEcCCCCccH--------HHHHHH--HHhchheECchhh---h
Confidence 45566677 999999855433 344545566788887767555431 011111 1244443222210 0
Q ss_pred HHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccccCH
Q 002979 270 LSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIFKGI 349 (861)
Q Consensus 270 l~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~KGi 349 (861)
. . ....++.++|+|++.+.+.. +.. ...+ ..-.+.++|+.+++....|++
T Consensus 149 ~--------------------~--~~~~~i~vi~n~v~~~~~~~----~~~---~~~~-~~~~~~~~i~~~gg~~~~~~~ 198 (357)
T PRK00726 149 P--------------------E--FFKPKAVVTGNPVREEILAL----AAP---PARL-AGREGKPTLLVVGGSQGARVL 198 (357)
T ss_pred h--------------------c--cCCCCEEEECCCCChHhhcc----cch---hhhc-cCCCCCeEEEEECCcHhHHHH
Confidence 0 0 11236788999999876542 110 0111 111467888999999999998
Q ss_pred HHHH-HHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 350 SLKL-LAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 350 ~~~l-~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
...+ +|++++.+. | .+++++|. ++. +++.+.++ . +.. +.+.+.+ ++...+|
T Consensus 199 ~~~l~~a~~~~~~~-~-----~~~~~~G~-----g~~-~~~~~~~~---------~---~~~--v~~~g~~--~~~~~~~ 250 (357)
T PRK00726 199 NEAVPEALALLPEA-L-----QVIHQTGK-----GDL-EEVRAAYA---------A---GIN--AEVVPFI--DDMAAAY 250 (357)
T ss_pred HHHHHHHHHHhhhC-c-----EEEEEcCC-----CcH-HHHHHHhh---------c---CCc--EEEeehH--hhHHHHH
Confidence 7776 888777432 2 34666663 222 23322211 1 111 3455554 6899999
Q ss_pred HhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC--------cccC---CCceEeCCC
Q 002979 429 AVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--------SPSL---SGAIRVNPW 497 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--------~~~l---~~ai~vnP~ 497 (861)
+.||+++.+| | +.+.+|||+|+. |+|++-..|. ++.+ ..+++++|.
T Consensus 251 ~~~d~~i~~~---g-~~~~~Ea~~~g~-------------------Pvv~~~~~~~~~~~~~~~~~~i~~~~~g~~~~~~ 307 (357)
T PRK00726 251 AAADLVICRA---G-ASTVAELAAAGL-------------------PAILVPLPHAADDHQTANARALVDAGAALLIPQS 307 (357)
T ss_pred HhCCEEEECC---C-HHHHHHHHHhCC-------------------CEEEecCCCCCcCcHHHHHHHHHHCCCEEEEEcc
Confidence 9999999877 3 578999999944 4666544321 2233 347888888
Q ss_pred C--HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHH
Q 002979 498 D--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 498 d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l 544 (861)
| +++++++|.++++. ++.++...+..+++....+...-++.+++.+
T Consensus 308 ~~~~~~l~~~i~~ll~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 355 (357)
T PRK00726 308 DLTPEKLAEKLLELLSD-PERLEAMAEAARALGKPDAAERLADLIEELA 355 (357)
T ss_pred cCCHHHHHHHHHHHHcC-HHHHHHHHHHHHhcCCcCHHHHHHHHHHHHh
Confidence 8 99999999999985 4555666666777777788777777776654
No 123
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.01 E-value=1.1e-09 Score=107.81 Aligned_cols=70 Identities=23% Similarity=0.259 Sum_probs=57.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCH--h
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDA--T 830 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~--~ 830 (861)
+|..+++.+++++ |++++++++|||+.||++|++.+|. +++|.++ +..|+|+++.+ +
T Consensus 76 ~k~~~~~~~~~~~---~~~~~~~~~vGDs~~D~~~~~~ag~--------------~~~v~~~~~~~~~~a~~i~~~~~~~ 138 (154)
T TIGR01670 76 NKLIAFSDILEKL---ALAPENVAYIGDDLIDWPVMEKVGL--------------SVAVADAHPLLIPRADYVTRIAGGR 138 (154)
T ss_pred chHHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEecCCcCHHHHHhCCEEecCCCCC
Confidence 3889999999999 9999999999999999999999997 3445443 46788888755 3
Q ss_pred H-HHHHHHHHHhhc
Q 002979 831 D-VLKLLQGLATAS 843 (861)
Q Consensus 831 e-V~~~L~~L~~~~ 843 (861)
+ +.++++.+....
T Consensus 139 g~~~~~~~~~~~~~ 152 (154)
T TIGR01670 139 GAVREVCELLLLAQ 152 (154)
T ss_pred cHHHHHHHHHHHhh
Confidence 3 889998887654
No 124
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.01 E-value=8.9e-10 Score=111.81 Aligned_cols=124 Identities=19% Similarity=0.258 Sum_probs=90.2
Q ss_pred ccceEEEecCCccccCCC----CCCCCCCHHHH---HHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002979 589 TERRAIFLDYDGTVVPET----SIIKSPGPEVI---SVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~----~~~~~~s~~~~---~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
..+|+|++|+||||++.. .....+...++ .+++.| +++|+.++|+|||+...+..+++.+ ++..
T Consensus 19 ~~ikli~~D~Dgtl~~~~i~~~~~~~~~~~~~~~d~~~i~~L-~~~Gi~v~I~T~~~~~~v~~~l~~l---gl~~----- 89 (183)
T PRK09484 19 ENIRLLICDVDGVFSDGLIYMGNNGEELKAFNVRDGYGIRCL-LTSGIEVAIITGRKSKLVEDRMTTL---GITH----- 89 (183)
T ss_pred hCceEEEEcCCeeeecCEEEEcCCCCEEEEEeccchHHHHHH-HHCCCEEEEEeCCCcHHHHHHHHHc---CCce-----
Confidence 358999999999999821 01333444443 688888 6789999999999998888877432 2100
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002979 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
.+
T Consensus 90 -------~f----------------------------------------------------------------------- 91 (183)
T PRK09484 90 -------LY----------------------------------------------------------------------- 91 (183)
T ss_pred -------ee-----------------------------------------------------------------------
Confidence 00
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---
Q 002979 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--- 818 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--- 818 (861)
.+ .-+|..+++++++++ |++++++++|||+.||++|++.+|. +++++++
T Consensus 92 --~g---------~~~k~~~l~~~~~~~---gl~~~ev~~VGDs~~D~~~a~~aG~--------------~~~v~~~~~~ 143 (183)
T PRK09484 92 --QG---------QSNKLIAFSDLLEKL---AIAPEQVAYIGDDLIDWPVMEKVGL--------------SVAVADAHPL 143 (183)
T ss_pred --cC---------CCcHHHHHHHHHHHh---CCCHHHEEEECCCHHHHHHHHHCCC--------------eEecCChhHH
Confidence 00 013678999999999 9999999999999999999999996 3445654
Q ss_pred -CcccceecC
Q 002979 819 -PSKAKYYLD 827 (861)
Q Consensus 819 -~s~Aky~l~ 827 (861)
...|+|+++
T Consensus 144 ~~~~a~~v~~ 153 (183)
T PRK09484 144 LLPRADYVTR 153 (183)
T ss_pred HHHhCCEEec
Confidence 346788885
No 125
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=99.00 E-value=1.3e-08 Score=113.58 Aligned_cols=180 Identities=13% Similarity=0.104 Sum_probs=114.6
Q ss_pred EEecccCCchHHHHhhCCchhHHHHHHHHHHc-CCCeEEEeecCcccccCHHHH-HHHHHHHHHhCCCCCCcEEEEEEec
Q 002979 300 KILPVGVHMGRLESVLNLPATATKIKEIEKQF-DGKKLILGIDDMDIFKGISLK-LLAMEQLLQQHPGMRGKVVLVQIVN 377 (861)
Q Consensus 300 ~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~-~~~~vil~Vdrld~~KGi~~~-l~Af~~ll~~~P~~~~~vvLvqi~~ 377 (861)
.++|+|++...+... .. ..++ .+ +++++|++++|....|++... +.|++++.+. +++ ++.++.
T Consensus 153 ~~i~n~v~~~~~~~~----~~---~~~~--~~~~~~~~i~~~gg~~~~~~~~~~l~~a~~~l~~~--~~~----~~~~~g 217 (348)
T TIGR01133 153 VLVGNPVRQEIRSLP----VP---RERF--GLREGKPTILVLGGSQGAKILNELVPKALAKLAEK--GIQ----IVHQTG 217 (348)
T ss_pred eEEcCCcCHHHhccc----ch---hhhc--CCCCCCeEEEEECCchhHHHHHHHHHHHHHHHhhc--CcE----EEEECC
Confidence 578999987655311 00 1111 11 467889999998888987654 4788777542 232 333432
Q ss_pred CCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCC
Q 002979 378 PARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGT 457 (861)
Q Consensus 378 p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~ 457 (861)
+++. +++++.+. + .+...++.+. .. ++..+|+.||++|.+| | +.+.+|||+|+
T Consensus 218 ----~~~~-~~l~~~~~----~-------~~l~~~v~~~---~~-~~~~~l~~ad~~v~~~---g-~~~l~Ea~~~g--- 270 (348)
T TIGR01133 218 ----KNDL-EKVKNVYQ----E-------LGIEAIVTFI---DE-NMAAAYAAADLVISRA---G-ASTVAELAAAG--- 270 (348)
T ss_pred ----cchH-HHHHHHHh----h-------CCceEEecCc---cc-CHHHHHHhCCEEEECC---C-hhHHHHHHHcC---
Confidence 2222 33333332 2 1223344443 22 7899999999999865 4 68999999994
Q ss_pred CcccccccCCCCCCCCceEEeccCCCCc-------ccC---CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHhh
Q 002979 458 PIMDEALGRERDSPHTSMLVVSEFIGCS-------PSL---SGAIRVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHY 525 (861)
Q Consensus 458 ~~~~~~~~~~~~~~~~g~lV~Se~~G~~-------~~l---~~ai~vnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~ 525 (861)
.|+|++.+.|.. +.+ ..|++++|.| +++++++|.++++ +++.++.+.++.+
T Consensus 271 ----------------~Pvv~~~~~~~~~~~~~~~~~i~~~~~G~~~~~~~~~~~~l~~~i~~ll~-~~~~~~~~~~~~~ 333 (348)
T TIGR01133 271 ----------------VPAILIPYPYAADDQYYNAKFLEDLGAGLVIRQKELLPEKLLEALLKLLL-DPANLEAMAEAAR 333 (348)
T ss_pred ----------------CCEEEeeCCCCccchhhHHHHHHHCCCEEEEecccCCHHHHHHHHHHHHc-CHHHHHHHHHHHH
Confidence 457777665532 233 3478898876 9999999999996 5555666677777
Q ss_pred hhhccCCHhHHHH
Q 002979 526 RYVSTHDVAYWAR 538 (861)
Q Consensus 526 ~~v~~~~~~~W~~ 538 (861)
+++..+...++++
T Consensus 334 ~~~~~~~~~~i~~ 346 (348)
T TIGR01133 334 KLAKPDAAKRIAE 346 (348)
T ss_pred hcCCccHHHHHHh
Confidence 8887776666554
No 126
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=99.00 E-value=2.6e-08 Score=111.86 Aligned_cols=251 Identities=14% Similarity=0.038 Sum_probs=142.9
Q ss_pred HHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEec--CCCChHHHhcCCch--HHHHHHhhcCCEE
Q 002979 183 ANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHS--PFPSSEIYRTLPVR--DEILRGLLNCDLI 258 (861)
Q Consensus 183 vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~--PfP~~e~f~~lp~r--~~il~~ll~~dli 258 (861)
......+.+.+. +| |+|++|++....++..+..+..++|+....|- .|- +..|+. ...+. -.+|.+
T Consensus 76 ~~~~l~~~l~~~-~p--DvV~~~g~~~~~~~~~~aa~~~~iPvv~~~~g~~s~~-----~~~~~~~~r~~~~--~~ad~~ 145 (363)
T cd03786 76 LLIGLEAVLLEE-KP--DLVLVLGDTNETLAAALAAFKLGIPVAHVEAGLRSFD-----RGMPDEENRHAID--KLSDLH 145 (363)
T ss_pred HHHHHHHHHHHh-CC--CEEEEeCCchHHHHHHHHHHHcCCCEEEEecccccCC-----CCCCchHHHHHHH--HHhhhc
Confidence 344444445444 78 89999998777776666666667888765441 110 001111 11111 135655
Q ss_pred eecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccC-CchHHHHhhCCchhHHHHHHHHHHc---CCC
Q 002979 259 GFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGV-HMGRLESVLNLPATATKIKEIEKQF---DGK 334 (861)
Q Consensus 259 gF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GI-d~~~~~~~~~~~~~~~~~~~l~~~~---~~~ 334 (861)
-.-+....+++.+ .|+ ...+|.++++++ |...+..... . ....++.+ .++
T Consensus 146 ~~~s~~~~~~l~~-----~G~---------------~~~kI~vign~v~d~~~~~~~~~-~-----~~~~~~~~~~~~~~ 199 (363)
T cd03786 146 FAPTEEARRNLLQ-----EGE---------------PPERIFVVGNTMIDALLRLLELA-K-----KELILELLGLLPKK 199 (363)
T ss_pred cCCCHHHHHHHHH-----cCC---------------CcccEEEECchHHHHHHHHHHhh-c-----cchhhhhcccCCCC
Confidence 4444444333332 121 223556677764 5433321111 0 01111222 345
Q ss_pred eEEEeecCccc---ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002979 335 KLILGIDDMDI---FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 335 ~vil~Vdrld~---~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
.+++.++|+.. .||+..+++|++++.+. + +.++..+. ++...++++.+ .+.+. ..+
T Consensus 200 ~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~--~----~~vi~~~~-----~~~~~~l~~~~----~~~~~------~~~ 258 (363)
T cd03786 200 YILVTLHRVENVDDGEQLEEILEALAELAEE--D----VPVVFPNH-----PRTRPRIREAG----LEFLG------HHP 258 (363)
T ss_pred EEEEEeCCccccCChHHHHHHHHHHHHHHhc--C----CEEEEECC-----CChHHHHHHHH----Hhhcc------CCC
Confidence 67788999875 79999999999887542 2 33554432 22223344333 22211 012
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CC
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SG 490 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ 490 (861)
.+.+.+.....++..+|+.||++|.+|- | +..|+++|+ .|+|++...+..+++ ..
T Consensus 259 ~v~~~~~~~~~~~~~l~~~ad~~v~~Sg----g-i~~Ea~~~g-------------------~PvI~~~~~~~~~~~~~~ 314 (363)
T cd03786 259 NVLLISPLGYLYFLLLLKNADLVLTDSG----G-IQEEASFLG-------------------VPVLNLRDRTERPETVES 314 (363)
T ss_pred CEEEECCcCHHHHHHHHHcCcEEEEcCc----c-HHhhhhhcC-------------------CCEEeeCCCCccchhhhe
Confidence 3456666778899999999999999984 4 468999984 457777655645444 44
Q ss_pred ceEeCC-CCHHHHHHHHHHHhcCCH
Q 002979 491 AIRVNP-WDIDAVADAMTLAINMRD 514 (861)
Q Consensus 491 ai~vnP-~d~~~~A~ai~~aL~m~~ 514 (861)
++.+.+ .|.++++++|.++++.+.
T Consensus 315 g~~~~~~~~~~~i~~~i~~ll~~~~ 339 (363)
T cd03786 315 GTNVLVGTDPEAILAAIEKLLSDEF 339 (363)
T ss_pred eeEEecCCCHHHHHHHHHHHhcCch
Confidence 444433 379999999999998553
No 127
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=98.98 E-value=3.9e-08 Score=112.02 Aligned_cols=272 Identities=10% Similarity=0.063 Sum_probs=153.6
Q ss_pred HHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhH
Q 002979 187 FADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 187 fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
-..++++..+| |+|.++ +....+..+.+++..++|+. +.++-+-. .+ . ++. -.+|.+-..+....
T Consensus 95 ~l~~~l~~~kP--DvVi~~-~p~~~~~~l~~~~~~~iP~~-~v~td~~~------~~--~-w~~--~~~d~~~v~s~~~~ 159 (391)
T PRK13608 95 KLINLLIKEKP--DLILLT-FPTPVMSVLTEQFNINIPVA-TVMTDYRL------HK--N-WIT--PYSTRYYVATKETK 159 (391)
T ss_pred HHHHHHHHhCc--CEEEEC-CcHHHHHHHHHhcCCCCCEE-EEeCCCCc------cc--c-ccc--CCCCEEEECCHHHH
Confidence 34455666788 888886 22223333333444466764 34444411 11 0 111 14788777665544
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CC-CeEEEeecC
Q 002979 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DG-KKLILGIDD 342 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~-~~vil~Vdr 342 (861)
+.+.+ .|++ ..+|.+.++.|+. .|... .+ ...+++++ .+ +.+++++|+
T Consensus 160 ~~l~~-----~gi~---------------~~ki~v~GiPv~~-~f~~~---~~----~~~~~~~~~l~~~~~~ilv~~G~ 211 (391)
T PRK13608 160 QDFID-----VGID---------------PSTVKVTGIPIDN-KFETP---ID----QKQWLIDNNLDPDKQTILMSAGA 211 (391)
T ss_pred HHHHH-----cCCC---------------HHHEEEECeecCh-Hhccc---cc----HHHHHHHcCCCCCCCEEEEECCC
Confidence 44432 1321 1123334445552 33211 11 12333444 23 456678999
Q ss_pred cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHH
Q 002979 343 MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRF 422 (861)
Q Consensus 343 ld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~ 422 (861)
+...||+..+++++ ++..|+++ ++.+++ .++ ++.+++.+ ..+ .. +.+.+.|.+ +
T Consensus 212 lg~~k~~~~li~~~---~~~~~~~~----~vvv~G----~~~---~l~~~l~~---~~~----~~---~~v~~~G~~--~ 265 (391)
T PRK13608 212 FGVSKGFDTMITDI---LAKSANAQ----VVMICG----KSK---ELKRSLTA---KFK----SN---ENVLILGYT--K 265 (391)
T ss_pred cccchhHHHHHHHH---HhcCCCce----EEEEcC----CCH---HHHHHHHH---Hhc----cC---CCeEEEecc--c
Confidence 99999999999885 34456554 655553 222 12222222 111 11 123455554 5
Q ss_pred HHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC------CCceEeCC
Q 002979 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL------SGAIRVNP 496 (861)
Q Consensus 423 el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------~~ai~vnP 496 (861)
++..+|+.||++|.. +.|++..|||+|+ .|+|++...+..+.- ..+.-+-+
T Consensus 266 ~~~~~~~~aDl~I~k----~gg~tl~EA~a~G-------------------~PvI~~~~~pgqe~~N~~~~~~~G~g~~~ 322 (391)
T PRK13608 266 HMNEWMASSQLMITK----PGGITISEGLARC-------------------IPMIFLNPAPGQELENALYFEEKGFGKIA 322 (391)
T ss_pred hHHHHHHhhhEEEeC----CchHHHHHHHHhC-------------------CCEEECCCCCCcchhHHHHHHhCCcEEEe
Confidence 799999999999863 3588999999994 457776543322211 22233336
Q ss_pred CCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHHHHHhh
Q 002979 497 WDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLERACRDH 551 (861)
Q Consensus 497 ~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~~~~~~ 551 (861)
.|.++++++|.++++. ++++..+.++.++....++....++.+++.+...++-+
T Consensus 323 ~~~~~l~~~i~~ll~~-~~~~~~m~~~~~~~~~~~s~~~i~~~l~~l~~~~~~~~ 376 (391)
T PRK13608 323 DTPEEAIKIVASLTNG-NEQLTNMISTMEQDKIKYATQTICRDLLDLIGHSSQPQ 376 (391)
T ss_pred CCHHHHHHHHHHHhcC-HHHHHHHHHHHHHhcCCCCHHHHHHHHHHHhhhhhhhh
Confidence 6999999999999974 45555666677777777888888888877776655433
No 128
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=98.85 E-value=5.8e-08 Score=106.83 Aligned_cols=65 Identities=18% Similarity=0.174 Sum_probs=54.4
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecC--CHh
Q 002979 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLD--DAT 830 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~--d~~ 830 (861)
..|+.+++.+++++ |++++++++|||+.||++|++.+|. +|++..+ +..|++.++ +.+
T Consensus 247 k~K~~~L~~la~~l---gi~~~qtIaVGDg~NDl~m~~~AGl--------------giA~nAkp~Vk~~Ad~~i~~~~l~ 309 (322)
T PRK11133 247 QYKADTLTRLAQEY---EIPLAQTVAIGDGANDLPMIKAAGL--------------GIAYHAKPKVNEQAQVTIRHADLM 309 (322)
T ss_pred ccHHHHHHHHHHHc---CCChhhEEEEECCHHHHHHHHHCCC--------------eEEeCCCHHHHhhCCEEecCcCHH
Confidence 46999999999999 9999999999999999999999996 5667333 378889886 467
Q ss_pred HHHHHHH
Q 002979 831 DVLKLLQ 837 (861)
Q Consensus 831 eV~~~L~ 837 (861)
+|+.+|.
T Consensus 310 ~~l~~~~ 316 (322)
T PRK11133 310 GVLCILS 316 (322)
T ss_pred HHHHHhc
Confidence 7776664
No 129
>KOG3189 consensus Phosphomannomutase [Lipid transport and metabolism]
Probab=98.81 E-value=6.8e-08 Score=94.68 Aligned_cols=200 Identities=19% Similarity=0.241 Sum_probs=133.5
Q ss_pred HHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc--cc-CCceEecCcEE
Q 002979 585 AYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP--CE-MLGIAAEHGYF 661 (861)
Q Consensus 585 ~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~--~~-~lgliaenG~~ 661 (861)
++++...-+++||.||||++ ....+++++.+.|++| .+.+.+.++-|-..+.+.+-++. +. .....+|||..
T Consensus 5 a~~r~~~~l~lfdvdgtLt~---~r~~~~~e~~~~l~~l--r~~v~ig~VggsDl~k~~eqlG~~Vl~~fDY~F~ENGl~ 79 (252)
T KOG3189|consen 5 AAARDEETLCLFDVDGTLTP---PRQKVTPEMLEFLQKL--RKKVTIGFVGGSDLSKQQEQLGDNVLEEFDYVFSENGLV 79 (252)
T ss_pred hhhcCCceEEEEecCCcccc---ccccCCHHHHHHHHHH--hhheEEEEeecHHHHHHHHHhchhHHhhhcccccCCCee
Confidence 44555567999999999999 7889999999999998 67899999999999888777743 12 23466899987
Q ss_pred EEeCCcceEEecC-Ccc-ChHHHHHHHHHHHHHhhc----CCCceEeeccceeEeee--ccCCc----cchh-----ccH
Q 002979 662 IRWNKTSEWETNH-LGA-DLEWKKIVEPVMRSYTEA----TDGSNIEIKESALVWHH--QDADP----DFGS-----CQA 724 (861)
Q Consensus 662 i~~~~~~~~~~~~-~~~-~~~w~~~v~~i~~~y~~~----~~gs~ie~k~~~l~~~~--~~~d~----~~~~-----~~a 724 (861)
-+..|...-...+ ... +..+++.+.-.+.+..+- .-|.++|-++-.+.+.. +++.. +|.. ..-
T Consensus 80 ~yk~gk~~~~Qsi~~~LGee~~q~liNF~LrYlsdidlPiKRGtFiEFRNgMiNvsPIGR~cs~EER~eF~e~Dkk~~iR 159 (252)
T KOG3189|consen 80 AYKGGKLLSKQSIINHLGEEKLQELINFCLRYLSDIDLPIKRGTFIEFRNGMINVSPIGRNCSQEERNEFEELDKKHKIR 159 (252)
T ss_pred EeeCCcchhHHHHHHHHhHHHHHHHHHHHHHHHHhcCCcccccceEEecCCceeccccccccCHHHHHHHHHhhhhhhhH
Confidence 7766543211100 000 111233333333343331 24889988776665432 22211 1111 112
Q ss_pred HHHHHHHHHHhcCCCEE-EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHc
Q 002979 725 KELLDHLESVLANEPAV-VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESI 795 (861)
Q Consensus 725 ~el~~~L~~~l~~~~~~-v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~a 795 (861)
+...+.|++.+++.++. .+.|+-.++|.|.|++|-..++.+-.. ..+.+..||| +.||.+.|..-
T Consensus 160 ~K~v~~Lr~~F~~~gLtFSIGGQISfDvFP~GWDKtyCLqhle~d------gf~~IhFFGDkT~~GGNDyEIf~dp 229 (252)
T KOG3189|consen 160 EKFVEALREEFADYGLTFSIGGQISFDVFPKGWDKTYCLQHLEKD------GFDTIHFFGDKTMPGGNDYEIFADP 229 (252)
T ss_pred HHHHHHHHHHhcccCeeEEECCeEEEeecCCCcchhHHHHHhhhc------CCceEEEeccccCCCCCcceeeeCC
Confidence 34667788888887754 456778899999999999998887543 3689999999 57999888654
No 130
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=98.80 E-value=1.7e-08 Score=95.64 Aligned_cols=55 Identities=24% Similarity=0.337 Sum_probs=46.2
Q ss_pred EEEecCCccccCCCC-----CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 593 AIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 593 lI~~DlDGTLl~~~~-----~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+++||+||||.+..+ ....+.+.+.+.|++| ++.|+.++|+||+....+..++..
T Consensus 1 ~~vfD~D~tl~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~ivS~~~~~~~~~~~~~ 60 (139)
T cd01427 1 AVLFDLDGTLLDSEPGIAEIEELELYPGVKEALKEL-KEKGIKLALATNKSRREVLELLEE 60 (139)
T ss_pred CeEEccCCceEccCccccccccCCcCcCHHHHHHHH-HHCCCeEEEEeCchHHHHHHHHHH
Confidence 489999999999432 1137889999999999 678999999999999999998854
No 131
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=98.77 E-value=8.8e-09 Score=98.50 Aligned_cols=128 Identities=21% Similarity=0.235 Sum_probs=88.8
Q ss_pred CeEEEeecCcccccCHHHHHH-HHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002979 334 KKLILGIDDMDIFKGISLKLL-AMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~-Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
..++++.|++...||+..+++ |++++.+++|+++ |+.+|... + + +.++ . .+.
T Consensus 2 ~~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~----l~i~G~~~-----~--~----l~~~-~-----------~~~ 54 (135)
T PF13692_consen 2 ILYIGYLGRIRPDKGLEELIEAALERLKEKHPDIE----LIIIGNGP-----D--E----LKRL-R-----------RPN 54 (135)
T ss_dssp -EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEE----EEEECESS--------H----HCCH-H-----------HCT
T ss_pred cccccccccccccccccchhhhHHHHHHHHCcCEE----EEEEeCCH-----H--H----HHHh-c-----------CCC
Confidence 357899999999999999999 9999999999755 88887522 2 1 2111 0 123
Q ss_pred EEEcCCCCHHHHHHHHHhcccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---
Q 002979 413 VLIDRPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--- 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--- 488 (861)
+.+.+.+ +|+.++|+.||+++.|+. .+|++...+|||++ |.|+|+|.. |+....
T Consensus 55 v~~~g~~--~e~~~~l~~~dv~l~p~~~~~~~~~k~~e~~~~-------------------G~pvi~~~~-~~~~~~~~~ 112 (135)
T PF13692_consen 55 VRFHGFV--EELPEILAAADVGLIPSRFNEGFPNKLLEAMAA-------------------GKPVIASDN-GAEGIVEED 112 (135)
T ss_dssp EEEE-S---HHHHHHHHC-SEEEE-BSS-SCC-HHHHHHHCT-------------------T--EEEEHH-HCHCHS---
T ss_pred EEEcCCH--HHHHHHHHhCCEEEEEeeCCCcCcHHHHHHHHh-------------------CCCEEECCc-chhhheeec
Confidence 4556666 689999999999999984 78999999999999 456888888 656555
Q ss_pred CCceEeCCCCHHHHHHHHHHHhc
Q 002979 489 SGAIRVNPWDIDAVADAMTLAIN 511 (861)
Q Consensus 489 ~~ai~vnP~d~~~~A~ai~~aL~ 511 (861)
+.++.+ +.|.++++++|.++++
T Consensus 113 ~~~~~~-~~~~~~l~~~i~~l~~ 134 (135)
T PF13692_consen 113 GCGVLV-ANDPEELAEAIERLLN 134 (135)
T ss_dssp SEEEE--TT-HHHHHHHHHHHHH
T ss_pred CCeEEE-CCCHHHHHHHHHHHhc
Confidence 235666 8899999999999875
No 132
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=98.76 E-value=2.8e-08 Score=99.10 Aligned_cols=138 Identities=20% Similarity=0.165 Sum_probs=99.1
Q ss_pred ceEEEecCCccccCCCC---C----CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEE
Q 002979 591 RRAIFLDYDGTVVPETS---I----IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIR 663 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~---~----~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~ 663 (861)
.|+++||+||||++-+- . .+..+..--..++.| ++.|+.++|+|+++...+...+..+ ++.
T Consensus 7 i~~~v~d~dGv~tdg~~~~~~~g~~~~~~~~~D~~~~~~L-~~~Gi~laIiT~k~~~~~~~~l~~l---gi~-------- 74 (169)
T TIGR02726 7 IKLVILDVDGVMTDGRIVINDEGIESRNFDIKDGMGVIVL-QLCGIDVAIITSKKSGAVRHRAEEL---KIK-------- 74 (169)
T ss_pred CeEEEEeCceeeECCeEEEcCCCcEEEEEecchHHHHHHH-HHCCCEEEEEECCCcHHHHHHHHHC---CCc--------
Confidence 79999999999998310 1 123456666788888 6788999999998888887777432 210
Q ss_pred eCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEE
Q 002979 664 WNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVK 743 (861)
Q Consensus 664 ~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~ 743 (861)
.|. .
T Consensus 75 -----~~f------------------------------~----------------------------------------- 78 (169)
T TIGR02726 75 -----RFH------------------------------E----------------------------------------- 78 (169)
T ss_pred -----EEE------------------------------e-----------------------------------------
Confidence 000 0
Q ss_pred EcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----C
Q 002979 744 RGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----P 819 (861)
Q Consensus 744 ~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~ 819 (861)
.++ .|...++.+++++ +++++++++|||+.||++|++.+|. +++++++ +
T Consensus 79 ------~~k----pkp~~~~~~~~~l---~~~~~ev~~iGD~~nDi~~~~~ag~--------------~~am~nA~~~lk 131 (169)
T TIGR02726 79 ------GIK----KKTEPYAQMLEEM---NISDAEVCYVGDDLVDLSMMKRVGL--------------AVAVGDAVADVK 131 (169)
T ss_pred ------cCC----CCHHHHHHHHHHc---CcCHHHEEEECCCHHHHHHHHHCCC--------------eEECcCchHHHH
Confidence 001 3677899999999 9999999999999999999999996 6777775 4
Q ss_pred cccceecCC--Hh-HHHHHHHHHHhhc
Q 002979 820 SKAKYYLDD--AT-DVLKLLQGLATAS 843 (861)
Q Consensus 820 s~Aky~l~d--~~-eV~~~L~~L~~~~ 843 (861)
..|+|++.. .+ .+.++++.+.+..
T Consensus 132 ~~A~~I~~~~~~~g~v~e~~e~il~~~ 158 (169)
T TIGR02726 132 EAAAYVTTARGGHGAVREVAELILKAQ 158 (169)
T ss_pred HhCCEEcCCCCCCCHHHHHHHHHHHhc
Confidence 778888743 23 3566666666543
No 133
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.74 E-value=3.3e-07 Score=103.78 Aligned_cols=139 Identities=17% Similarity=0.207 Sum_probs=89.4
Q ss_pred HHHHc---CCCeE-EE-eecCcccccC-HHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHH
Q 002979 327 IEKQF---DGKKL-IL-GIDDMDIFKG-ISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRI 400 (861)
Q Consensus 327 l~~~~---~~~~v-il-~Vdrld~~KG-i~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~I 400 (861)
+++++ .++++ ++ +-+|....|+ +...++|++.+.+++|+++ +++++. .++..+++++.+ .+
T Consensus 176 ~~~~l~~~~~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~----~ii~~~----~~~~~~~~~~~~----~~- 242 (380)
T PRK00025 176 ARARLGLDPDARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLR----FVLPLV----NPKRREQIEEAL----AE- 242 (380)
T ss_pred HHHHcCCCCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeE----EEEecC----ChhhHHHHHHHH----hh-
Confidence 44455 24444 33 3457766544 6888999999988888765 666653 122223333322 22
Q ss_pred hhccCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-
Q 002979 401 NEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS- 479 (861)
Q Consensus 401 N~~~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S- 479 (861)
++ +. .+.++. .++..+|+.||++|.+| |.+.+|+|+|+. |+|++
T Consensus 243 ---~~--~~-~v~~~~-----~~~~~~~~~aDl~v~~s-----G~~~lEa~a~G~-------------------PvI~~~ 287 (380)
T PRK00025 243 ---YA--GL-EVTLLD-----GQKREAMAAADAALAAS-----GTVTLELALLKV-------------------PMVVGY 287 (380)
T ss_pred ---cC--CC-CeEEEc-----ccHHHHHHhCCEEEECc-----cHHHHHHHHhCC-------------------CEEEEE
Confidence 10 11 133333 37899999999999998 678889999944 46665
Q ss_pred ----------------cCCCCcccCCC-----ceEeCCCCHHHHHHHHHHHhcCC
Q 002979 480 ----------------EFIGCSPSLSG-----AIRVNPWDIDAVADAMTLAINMR 513 (861)
Q Consensus 480 ----------------e~~G~~~~l~~-----ai~vnP~d~~~~A~ai~~aL~m~ 513 (861)
.+.|..+.+.+ .++++..|.+++++++.+.|+.+
T Consensus 288 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~i~~ll~~~ 342 (380)
T PRK00025 288 KVSPLTFWIAKRLVKVPYVSLPNLLAGRELVPELLQEEATPEKLARALLPLLADG 342 (380)
T ss_pred ccCHHHHHHHHHHHcCCeeehHHHhcCCCcchhhcCCCCCHHHHHHHHHHHhcCH
Confidence 34454555532 36678889999999999999843
No 134
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=98.72 E-value=2.5e-07 Score=103.11 Aligned_cols=249 Identities=12% Similarity=0.041 Sum_probs=140.0
Q ss_pred HHHHcCCCCCEEEEeCccccc--HHHHH-Hh-hcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhH
Q 002979 191 VMEVINPDDDCVWVHDYHLMV--LPTFL-RK-RFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYA 266 (861)
Q Consensus 191 v~~~~~p~~D~VwvhDyhl~l--lp~~l-r~-~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~ 266 (861)
++..++|+ |+|.+|..-+.. ++..+ ++ +..++|+.+++|-=||..-.. .-..+......+-.||.|..++....
T Consensus 58 ~~~~~~~~-Dvv~~~~P~~~~~~~~~~~~~~~k~~~~k~i~~ihD~~~~~~~~-~~~~~~~~~~~~~~aD~iI~~S~~~~ 135 (333)
T PRK09814 58 ILASLKPG-DIVIFQFPTWNGFEFDRLFVDKLKKKQVKIIILIHDIEPLRFDS-NYYLMKEEIDMLNLADVLIVHSKKMK 135 (333)
T ss_pred HHhcCCCC-CEEEEECCCCchHHHHHHHHHHHHHcCCEEEEEECCcHHHhccc-cchhhHHHHHHHHhCCEEEECCHHHH
Confidence 45557774 999999754432 22322 11 112699999999877642110 00012233445557899999988665
Q ss_pred HHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEEEeecCcccc
Q 002979 267 RHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLILGIDDMDIF 346 (861)
Q Consensus 267 ~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vil~Vdrld~~ 346 (861)
+.+.+ .|+. ..++.+.|+..+..... .+....+++.|+++||+...
T Consensus 136 ~~l~~-----~g~~---------------~~~i~~~~~~~~~~~~~--------------~~~~~~~~~~i~yaG~l~k~ 181 (333)
T PRK09814 136 DRLVE-----EGLT---------------TDKIIVQGIFDYLNDIE--------------LVKTPSFQKKINFAGNLEKS 181 (333)
T ss_pred HHHHH-----cCCC---------------cCceEeccccccccccc--------------ccccccCCceEEEecChhhc
Confidence 55543 1221 01122233322221000 00112345689999999843
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002979 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
.++. +..|++ .|+.+|.. ++.. ...+.+.+.|.++.+|+..
T Consensus 182 ~~l~----------~~~~~~----~l~i~G~g-----~~~~--------------------~~~~~V~f~G~~~~eel~~ 222 (333)
T PRK09814 182 PFLK----------NWSQGI----KLTVFGPN-----PEDL--------------------ENSANISYKGWFDPEELPN 222 (333)
T ss_pred hHHH----------hcCCCC----eEEEECCC-----cccc--------------------ccCCCeEEecCCCHHHHHH
Confidence 3211 124554 37777732 2211 0113457788999999999
Q ss_pred HHHhcccceecccc-----------cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---Cce
Q 002979 427 YYAVAECCIVNAVR-----------DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAI 492 (861)
Q Consensus 427 ly~~ADv~vvtS~~-----------EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai 492 (861)
+|+. |+.+++.-. -.++--..||||| |-|+|++..++.++.+. .|+
T Consensus 223 ~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~-------------------G~PVI~~~~~~~~~~V~~~~~G~ 282 (333)
T PRK09814 223 ELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAA-------------------GLPVIVWSKAAIADFIVENGLGF 282 (333)
T ss_pred HHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHC-------------------CCCEEECCCccHHHHHHhCCceE
Confidence 9988 665554311 1233336778999 45699999988888882 378
Q ss_pred EeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHH
Q 002979 493 RVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARS 539 (861)
Q Consensus 493 ~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~ 539 (861)
.++ +.++++++|... ++++++.+.++.++..........++.
T Consensus 283 ~v~--~~~el~~~l~~~---~~~~~~~m~~n~~~~~~~~~~g~~~~~ 324 (333)
T PRK09814 283 VVD--SLEELPEIIDNI---TEEEYQEMVENVKKISKLLRNGYFTKK 324 (333)
T ss_pred EeC--CHHHHHHHHHhc---CHHHHHHHHHHHHHHHHHHhcchhHHH
Confidence 887 688999999873 455555555555544433333333333
No 135
>PF03332 PMM: Eukaryotic phosphomannomutase; InterPro: IPR005002 This enzyme (5.4.2.8 from EC) is involved in the synthesis of the GDP-mannose and dolichol-phosphate-mannose required for a number of critical mannosyl transfer reactions.; GO: 0004615 phosphomannomutase activity, 0019307 mannose biosynthetic process, 0005737 cytoplasm; PDB: 2I55_B 2I54_C 3F9R_A 2FUE_A 2FUC_A 2AMY_A 2Q4R_A.
Probab=98.72 E-value=1.1e-07 Score=96.57 Aligned_cols=193 Identities=19% Similarity=0.279 Sum_probs=126.5
Q ss_pred HHHHHHHhhcCCCCeEEEECCCChhhHHHHhc-c--cc-CCceEecCcEEEEeCCcceEEecCCcc--ChHHHHHHHHHH
Q 002979 616 VISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA-P--CE-MLGIAAEHGYFIRWNKTSEWETNHLGA--DLEWKKIVEPVM 689 (861)
Q Consensus 616 ~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~-~--~~-~lgliaenG~~i~~~~~~~~~~~~~~~--~~~w~~~v~~i~ 689 (861)
+.+.|++| .+...|.++||-....+++-+. . +. ...+.++||...+..+...|...+... +...++.+.-++
T Consensus 1 M~~~L~~L--~~~~~vgvVgGsd~~k~~eQl~~~~~~~~fdy~f~enG~~~y~~~~~~~~~~~~~~lgee~~~~~in~~l 78 (220)
T PF03332_consen 1 MAELLQKL--RKKVPVGVVGGSDLPKIQEQLGGDDVLDNFDYVFPENGLVAYKNGELIWSQSIAEFLGEEKLQKLINFCL 78 (220)
T ss_dssp HHHHHHHH--HTTSEEEEEESS-HHHHHHHHSTTTHHHH-SEEEEGGGTEEEETTEEEEE--HHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHH--HhcCeEEEEcchhHHHHHHHHcccchHhhCCeeecCCCCeEEECCCchhhHhHHHHcCHHHHHHHHHHHH
Confidence 35678888 3579999999999998888773 2 11 345889999999999888886543210 111233333333
Q ss_pred HHHhh----cCCCceEeeccceeEeee--ccCCc----cchh----ccH-HHHHHHHHHHhcCCCEE-EEEcCeEEEEec
Q 002979 690 RSYTE----ATDGSNIEIKESALVWHH--QDADP----DFGS----CQA-KELLDHLESVLANEPAV-VKRGQHIVEVKP 753 (861)
Q Consensus 690 ~~y~~----~~~gs~ie~k~~~l~~~~--~~~d~----~~~~----~~a-~el~~~L~~~l~~~~~~-v~~g~~~vEI~p 753 (861)
.+..+ ..-|.++|.+...+.+.. +.+.. .|.. ... +.+.+.|++.+.+..+. ...|...++|.|
T Consensus 79 ~~~~~l~lp~krGtfIE~R~gmIn~SpiGr~a~~eer~~f~~~D~~~~iR~~~v~~L~~~f~d~~L~~siGGqiSiDvfp 158 (220)
T PF03332_consen 79 RYISDLDLPVKRGTFIEFRGGMINFSPIGRNASQEERDEFDEYDKKHKIREKLVEALKKEFPDFGLTFSIGGQISIDVFP 158 (220)
T ss_dssp HHHHT---S---S-SEEEESSEEEE-SS-TTS-HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCCSEEEEEETTTEEEEEE
T ss_pred HHHHhCCCCccCCCceeecCCcEEECcccCcCCHHHHHhhhhcChhhhHHHHHHHHHHHHCCCCceEEecCCceEEcccc
Confidence 33332 124899999998887763 22221 1111 111 34677788888877654 456788999999
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeC----CcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcccceecCCH
Q 002979 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGD----DRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSKAKYYLDDA 829 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD----~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~Aky~l~d~ 829 (861)
+|++|..++++|.+. ..+++++||| +.||.++|...+. .+.+ +.++
T Consensus 159 ~GwDKty~Lr~l~~~------~~~~I~FfGDkt~pGGNDyei~~~~rt-------------~g~~-----------V~~p 208 (220)
T PF03332_consen 159 KGWDKTYCLRHLEDE------GFDEIHFFGDKTFPGGNDYEIFEDPRT-------------IGHT-----------VTSP 208 (220)
T ss_dssp TT-SGGGGGGGTTTT------T-SEEEEEESS-STTSTTHHHHHSTTS-------------EEEE------------SSH
T ss_pred CCccHHHHHHHHHhc------ccceEEEEehhccCCCCCceeeecCCc-------------cEEE-----------eCCH
Confidence 999999999998653 2799999999 5799999988654 3444 4578
Q ss_pred hHHHHHHHHHH
Q 002979 830 TDVLKLLQGLA 840 (861)
Q Consensus 830 ~eV~~~L~~L~ 840 (861)
++.++.|++|.
T Consensus 209 ~DT~~~l~~l~ 219 (220)
T PF03332_consen 209 EDTIKQLKELF 219 (220)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 88888888775
No 136
>TIGR02094 more_P_ylases alpha-glucan phosphorylases. This family consists of known phosphorylases, and homologs believed to share the function of using inorganic phosphate to cleave an alpha 1,4 linkage between the terminal glucose residue and the rest of the polymer (maltodextrin, glycogen, etc.). The name of the glucose storage polymer substrate, and therefore the name of this enzyme, depends on the chain lengths and branching patterns. A number of the members of this family have been shown to operate on small maltodextrins, as may be obtained by utilization of exogenous sources. This family represents a distinct clade from the related family modeled by TIGR02093/PF00343.
Probab=98.71 E-value=2.8e-06 Score=100.85 Aligned_cols=180 Identities=13% Similarity=0.102 Sum_probs=118.7
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002979 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
+..++..|.|+...||..+.+.+++++++ .+|+. .+.+|..|.....+. .-.++.+.+.+++++ +.+.
T Consensus 388 d~~~ig~v~Rl~~yKr~dLil~~i~~l~~i~~~~~~--pvq~V~~Gka~p~d~-~gk~~i~~i~~la~~-------~~~~ 457 (601)
T TIGR02094 388 DVLTIGFARRFATYKRADLIFRDLERLARILNNPER--PVQIVFAGKAHPADG-EGKEIIQRIVEFSKR-------PEFR 457 (601)
T ss_pred CCcEEEEEEcchhhhhHHHHHHHHHHHHHHhhCCCC--CeEEEEEEecCcccc-hHHHHHHHHHHHHhc-------ccCC
Confidence 45688999999999999999999999986 55552 366777775432221 124455666666542 1122
Q ss_pred -cEEEEcCCCCHHHHHHHHHhccccee-ccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCccc
Q 002979 411 -PVVLIDRPVPRFEKSAYYAVAECCIV-NAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS 487 (861)
Q Consensus 411 -pvv~~~~~v~~~el~aly~~ADv~vv-tS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (861)
.|+++. ..+..--..+|.+||+++. ||. .|.-|+.-+-||.- |.|..|-.-|...+
T Consensus 458 ~kv~f~~-~Yd~~lA~~i~aG~Dv~L~~Psr~~EacGtsqMka~~n--------------------GgL~~sv~DG~~~E 516 (601)
T TIGR02094 458 GRIVFLE-NYDINLARYLVSGVDVWLNNPRRPLEASGTSGMKAAMN--------------------GVLNLSILDGWWGE 516 (601)
T ss_pred CCEEEEc-CCCHHHHHHHhhhheeEEeCCCCCcCCchHHHHHHHHc--------------------CCceeecccCcccc
Confidence 344444 4455555588999999999 777 89998888777773 55677777766555
Q ss_pred C---CCceEeCC------------CCHHHHHHHHHHHh-cC----C----HHHHHH-HHHHhhhhhccCCHhHHHHHHHH
Q 002979 488 L---SGAIRVNP------------WDIDAVADAMTLAI-NM----R----DSEKQL-RHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 488 l---~~ai~vnP------------~d~~~~A~ai~~aL-~m----~----~~e~~~-r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
. .+|+.+.+ .|.+++-++|.+++ .+ + +.+... +.+.|......+++.+-+++++.
T Consensus 517 ~~~~~nGf~f~~~~~~~~~~~~d~~da~~l~~~L~~ai~~~yy~~~~~~~p~~W~~~~k~am~~~~~~fsw~r~a~~Y~~ 596 (601)
T TIGR02094 517 GYDGDNGWAIGDGEEYDDEEEQDRLDAEALYDLLENEVIPLYYDRDEKGIPADWVEMMKESIATIAPRFSTNRMVREYVD 596 (601)
T ss_pred cCCCCcEEEECCCccccccccccCCCHHHHHHHHHHHHHHHHhcCCcccCcHHHHHHHHHHHhccCCCCCHHHHHHHHHH
Confidence 4 34788875 89999999998877 21 1 112223 33334443445777777777665
Q ss_pred H
Q 002979 543 D 543 (861)
Q Consensus 543 ~ 543 (861)
.
T Consensus 597 ~ 597 (601)
T TIGR02094 597 K 597 (601)
T ss_pred H
Confidence 3
No 137
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=98.69 E-value=9.2e-08 Score=100.08 Aligned_cols=84 Identities=21% Similarity=0.237 Sum_probs=64.7
Q ss_pred CCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC
Q 002979 737 NEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG 816 (861)
Q Consensus 737 ~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG 816 (861)
..+..+..+.....-+| +...+..+++.+ |.+++++++|||+.+|+.|.+++|. .+++|++|
T Consensus 130 ~~F~~i~g~~~~~~~KP----~P~~l~~~~~~~---~~~~~~~l~VGDs~~Di~aA~~Ag~-----------~~v~v~~g 191 (220)
T COG0546 130 DYFDVIVGGDDVPPPKP----DPEPLLLLLEKL---GLDPEEALMVGDSLNDILAAKAAGV-----------PAVGVTWG 191 (220)
T ss_pred cccceEEcCCCCCCCCc----CHHHHHHHHHHh---CCChhheEEECCCHHHHHHHHHcCC-----------CEEEEECC
Confidence 33334444444444444 678889999999 8888899999999999999999995 25789998
Q ss_pred CC------CcccceecCCHhHHHHHHHH
Q 002979 817 RK------PSKAKYYLDDATDVLKLLQG 838 (861)
Q Consensus 817 ~~------~s~Aky~l~d~~eV~~~L~~ 838 (861)
.. ...|+++++++.++...|..
T Consensus 192 ~~~~~~l~~~~~d~vi~~~~el~~~l~~ 219 (220)
T COG0546 192 YNSREELAQAGADVVIDSLAELLALLAE 219 (220)
T ss_pred CCCCcchhhcCCCEEECCHHHHHHHHhc
Confidence 53 36788999999999887753
No 138
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=98.68 E-value=8.2e-07 Score=104.02 Aligned_cols=272 Identities=14% Similarity=0.090 Sum_probs=168.6
Q ss_pred HHHHHHHHHHHHHHH----cCCCCCEEE--EeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc--hHHHHHH
Q 002979 180 YVSANKIFADKVMEV----INPDDDCVW--VHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV--RDEILRG 251 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~----~~p~~D~Vw--vhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~--r~~il~~ 251 (861)
|...+..++..+-+. .. ++|++. ++.-|... +....|..++.+..|+ ... |. -+..+..
T Consensus 203 f~~~~eLi~efl~~l~~~~~~-~~d~~Iva~Dr~~~~~----~~~~~~~~~~~ls~f~---~~~-----~~~~y~~~l~~ 269 (519)
T TIGR03713 203 YSNMDELIREKFQRYLKVEVK-DDDEIIVASDDRHNFL----VADTFPAKNLIFSLFS---ERN-----RHHTYLDLYES 269 (519)
T ss_pred ECCHHHHHHHHHHHHHHhhCC-CCCEEEEEcCchhhhh----HhhcCccceEEEEecc---Ccc-----cccchhhhhhC
Confidence 444455555544333 33 458777 77777766 4445554455556665 111 22 2466667
Q ss_pred hhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc
Q 002979 252 LLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (861)
Q Consensus 252 ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 331 (861)
+-.+|.|-.-|.+-.+........ .. ....|..+|++.=...+ ...++.
T Consensus 270 ~~~~d~iIv~T~~q~~~l~~~~~~----------------~~-~~~~v~~Ip~~~~~~~~--------------~~s~r~ 318 (519)
T TIGR03713 270 LSRADLIIVDREDIERLLEENYRE----------------NY-VEFDISRITPFDTRLRL--------------GQSQQL 318 (519)
T ss_pred hhhcCeEEEcCHHHHHHHHHHhhh----------------cc-cCCcceeeCccceEEec--------------Chhhcc
Confidence 777787666565433322211100 00 11233345554331110 112333
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC---
Q 002979 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN--- 408 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~--- 408 (861)
.++.|.+++||+ +.|-+...|+|+.++++++|+.. |...|.. .. .+..+.+.++++++|.+++...
T Consensus 319 ~~~~I~v~idrL-~ek~~~~~I~av~~~~~~~p~~~----L~~~gy~---~~---~~~~~~l~~~i~~~~~~~~~~~~~~ 387 (519)
T TIGR03713 319 YETEIGFWIDGL-SDEELQQILQQLLQYILKNPDYE----LKILTYN---ND---NDITQLLEDILEQINEEYNQDKNFF 387 (519)
T ss_pred cceEEEEEcCCC-ChHHHHHHHHHHHHHHhhCCCeE----EEEEEec---Cc---hhHHHHHHHHHHHHHhhhchhhhcc
Confidence 567788888899 99999999999999999999976 7666632 11 2345566666677766643211
Q ss_pred ---------c----------ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCC
Q 002979 409 ---------Y----------EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERD 469 (861)
Q Consensus 409 ---------~----------~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~ 469 (861)
- ...+.|.+..+..++.+.|.-|.++|.+|..|||+ +.+|||+.+
T Consensus 388 ~~~~~~~~~~~~~~~~~~~~~~~v~f~gy~~e~dl~~~~~~arl~id~s~~eg~~-~~ieAiS~G--------------- 451 (519)
T TIGR03713 388 SLSEQDENQPILQTDEEQKEKERIAFTTLTNEEDLISALDKLRLIIDLSKEPDLY-TQISGISAG--------------- 451 (519)
T ss_pred ccchhhhhhhcccchhhcccccEEEEEecCCHHHHHHHHhhheEEEECCCCCChH-HHHHHHHcC---------------
Confidence 0 03677787777889999999999999999999999 999999973
Q ss_pred CCCCceEEeccCCCCcccC---CCceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCC
Q 002979 470 SPHTSMLVVSEFIGCSPSL---SGAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHD 532 (861)
Q Consensus 470 ~~~~g~lV~Se~~G~~~~l---~~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~ 532 (861)
-|.| .-|.++.+ .+|.+| .|++++++||...|.-+ ..........++....++
T Consensus 452 ----iPqI---nyg~~~~V~d~~NG~li--~d~~~l~~al~~~L~~~-~~wn~~~~~sy~~~~~yS 507 (519)
T TIGR03713 452 ----IPQI---NKVETDYVEHNKNGYII--DDISELLKALDYYLDNL-KNWNYSLAYSIKLIDDYS 507 (519)
T ss_pred ----CCee---ecCCceeeEcCCCcEEe--CCHHHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhh
Confidence 3344 55666666 358888 79999999999999844 233333334444443333
No 139
>KOG1387 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=98.67 E-value=3.5e-07 Score=96.94 Aligned_cols=181 Identities=10% Similarity=0.134 Sum_probs=129.9
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCC--CCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc
Q 002979 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPG--MRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE 410 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~--~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~ 410 (861)
....+|+++.+.|.|+.. .|+-+...+.++|. .-.++.|+++|+ .|+ ++-++.-+.++.++.+++- .
T Consensus 268 r~~~ll~l~Q~RPEKnH~-~Lql~Al~~~~~pl~a~~~~iKL~ivGS-cRn--eeD~ervk~Lkd~a~~L~i-------~ 336 (465)
T KOG1387|consen 268 RENQLLSLAQFRPEKNHK-ILQLFALYLKNEPLEASVSPIKLIIVGS-CRN--EEDEERVKSLKDLAEELKI-------P 336 (465)
T ss_pred cceEEEEEeecCcccccH-HHHHHHHHHhcCchhhccCCceEEEEec-cCC--hhhHHHHHHHHHHHHhcCC-------c
Confidence 357899999999999999 77777778888887 334577887774 333 3334444556666665532 2
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc--ccC
Q 002979 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS--PSL 488 (861)
Q Consensus 411 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~--~~l 488 (861)
.-+.|.-.+|.+++..+|..|-+-|-+-..|-||+.+.||||++ .+.++..+|.. +.+
T Consensus 337 ~~v~F~~N~Py~~lv~lL~~a~iGvh~MwNEHFGIsVVEyMAAG--------------------lIpi~h~SgGP~lDIV 396 (465)
T KOG1387|consen 337 KHVQFEKNVPYEKLVELLGKATIGVHTMWNEHFGISVVEYMAAG--------------------LIPIVHNSGGPLLDIV 396 (465)
T ss_pred cceEEEecCCHHHHHHHhccceeehhhhhhhhcchhHHHHHhcC--------------------ceEEEeCCCCCceeee
Confidence 34567779999999999999999999999999999999999983 33333333322 111
Q ss_pred ---C---CceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHHHHH
Q 002979 489 ---S---GAIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQDLER 546 (861)
Q Consensus 489 ---~---~ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~l~~ 546 (861)
. .|++. -+.++-|++|.+++.|..+||....+..+..+.++.-...-++|...+..
T Consensus 397 ~~~~G~~tGFla--~t~~EYaE~iLkIv~~~~~~r~~~r~~AR~s~~RFsE~~F~kd~~~~i~k 458 (465)
T KOG1387|consen 397 TPWDGETTGFLA--PTDEEYAEAILKIVKLNYDERNMMRRNARKSLARFGELKFDKDWENPICK 458 (465)
T ss_pred eccCCccceeec--CChHHHHHHHHHHHHcCHHHHHHHHHHHHHHHHHhhHHHHHHhHhHHHHH
Confidence 1 25555 36789999999999999999877777777777666656655666544443
No 140
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=98.64 E-value=1.8e-08 Score=106.16 Aligned_cols=67 Identities=18% Similarity=0.092 Sum_probs=56.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--C-----cccceecCCHh
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--P-----SKAKYYLDDAT 830 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--~-----s~Aky~l~d~~ 830 (861)
+...+.++++++ |++++++++|||+.+|+.+.+.+|. .+++|++|.. + ..|.|.++++.
T Consensus 153 ~p~~~~~~~~~l---~~~p~~~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~i~~~~ 218 (229)
T PRK13226 153 HPLPLLVAAERI---GVAPTDCVYVGDDERDILAARAAGM-----------PSVAALWGYRLHDDDPLAWQADVLVEQPQ 218 (229)
T ss_pred CHHHHHHHHHHh---CCChhhEEEeCCCHHHHHHHHHCCC-----------cEEEEeecCCCCCcChhhcCCCeeeCCHH
Confidence 678899999999 9999999999999999999999997 3577888753 1 34889999999
Q ss_pred HHHHHHHH
Q 002979 831 DVLKLLQG 838 (861)
Q Consensus 831 eV~~~L~~ 838 (861)
++.+.|.+
T Consensus 219 el~~~~~~ 226 (229)
T PRK13226 219 LLWNPATW 226 (229)
T ss_pred HHHHHhcC
Confidence 99887753
No 141
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=98.63 E-value=4.7e-07 Score=97.70 Aligned_cols=71 Identities=25% Similarity=0.343 Sum_probs=60.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHh
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDAT 830 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~ 830 (861)
.|..++.++++++ +++++++++|||+.+|+.+.+.+|. .+++|.+|.. ...|+|.+++..
T Consensus 196 ~k~~~~~~~l~~~---~~~p~~~l~IGDs~~Di~aA~~AG~-----------~~I~v~~g~~~~~~l~~~~ad~~i~~~~ 261 (273)
T PRK13225 196 SKRRALSQLVARE---GWQPAAVMYVGDETRDVEAARQVGL-----------IAVAVTWGFNDRQSLVAACPDWLLETPS 261 (273)
T ss_pred CCHHHHHHHHHHh---CcChhHEEEECCCHHHHHHHHHCCC-----------eEEEEecCCCCHHHHHHCCCCEEECCHH
Confidence 4778999999999 9999999999999999999999997 3567788743 246899999999
Q ss_pred HHHHHHHHHHh
Q 002979 831 DVLKLLQGLAT 841 (861)
Q Consensus 831 eV~~~L~~L~~ 841 (861)
++..++..|..
T Consensus 262 eL~~~~~~~~~ 272 (273)
T PRK13225 262 DLLQAVTQLMR 272 (273)
T ss_pred HHHHHHHHHhc
Confidence 99999887753
No 142
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=98.62 E-value=7.1e-08 Score=91.66 Aligned_cols=68 Identities=22% Similarity=0.260 Sum_probs=51.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecC---CH
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLD---DA 829 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~---d~ 829 (861)
+|-.+.+.|++++ ++.+++|.++||+.||+++|+.+|. ++++.++ ...|.|++. ..
T Consensus 83 dK~~a~~~L~~~~---~l~~e~~ayiGDD~~Dlpvm~~vGl--------------s~a~~dAh~~v~~~a~~Vt~~~GG~ 145 (170)
T COG1778 83 DKLAAFEELLKKL---NLDPEEVAYVGDDLVDLPVMEKVGL--------------SVAVADAHPLLKQRADYVTSKKGGE 145 (170)
T ss_pred hHHHHHHHHHHHh---CCCHHHhhhhcCccccHHHHHHcCC--------------cccccccCHHHHHhhHhhhhccCcc
Confidence 3788899999999 9999999999999999999999996 4445444 367888874 23
Q ss_pred hHHHHHHHHHHh
Q 002979 830 TDVLKLLQGLAT 841 (861)
Q Consensus 830 ~eV~~~L~~L~~ 841 (861)
..|.++.+-+..
T Consensus 146 GAvREv~dlil~ 157 (170)
T COG1778 146 GAVREVCDLILQ 157 (170)
T ss_pred hHHHHHHHHHHH
Confidence 445555554443
No 143
>PRK10444 UMP phosphatase; Provisional
Probab=98.61 E-value=8e-07 Score=94.56 Aligned_cols=59 Identities=12% Similarity=0.181 Sum_probs=50.6
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002979 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
+|+|+||+||||+. .+ .+.+.+.++|+.| ++.|..++++|+|+......+...+..+|+
T Consensus 1 ~~~v~~DlDGtL~~---~~-~~~p~a~~~l~~L-~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~ 59 (248)
T PRK10444 1 IKNVICDIDGVLMH---DN-VAVPGAAEFLHRI-LDKGLPLVLLTNYPSQTGQDLANRFATAGV 59 (248)
T ss_pred CcEEEEeCCCceEe---CC-eeCccHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 44 7889999999999 789999999999999888777766655554
No 144
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=98.59 E-value=1e-06 Score=94.50 Aligned_cols=65 Identities=15% Similarity=0.167 Sum_probs=51.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCC-C-------CcccceecCC
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGR-K-------PSKAKYYLDD 828 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~-------~s~Aky~l~d 828 (861)
+....+.+++++ |.+++++++|||+. +|+.+-+.+|.. ++.|..|. . ...++|++++
T Consensus 181 ~p~~~~~~~~~~---~~~~~~~~~vGD~~~~Di~~a~~~G~~-----------~i~v~~G~~~~~~~~~~~~~pd~~~~s 246 (257)
T TIGR01458 181 SKTFFLEALRAT---GCEPEEAVMIGDDCRDDVGGAQDCGMR-----------GIQVRTGKYRPSDEEKINVPPDLTCDS 246 (257)
T ss_pred CHHHHHHHHHHh---CCChhhEEEECCCcHHHHHHHHHcCCe-----------EEEECCCCCChHHhcccCCCCCEEECC
Confidence 566888889988 99999999999995 999999999973 35566663 1 1346788999
Q ss_pred HhHHHHHH
Q 002979 829 ATDVLKLL 836 (861)
Q Consensus 829 ~~eV~~~L 836 (861)
..++.++|
T Consensus 247 l~el~~~l 254 (257)
T TIGR01458 247 LPHAVDLI 254 (257)
T ss_pred HHHHHHHH
Confidence 99988765
No 145
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.57 E-value=3.2e-07 Score=95.15 Aligned_cols=58 Identities=22% Similarity=0.276 Sum_probs=47.2
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---cccceecCC
Q 002979 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP---SKAKYYLDD 828 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~---s~Aky~l~d 828 (861)
.+-+|..+++.+++.+ |+++++++++|||.||.+||+.+|. ++++..++ ..|+...+.
T Consensus 141 ~~~~K~~~l~~~~~~~---g~~~~~~~a~gDs~nDlpml~~ag~--------------~ia~n~~~~l~~~a~~~~~~ 201 (212)
T COG0560 141 DGEGKAKALRELAAEL---GIPLEETVAYGDSANDLPMLEAAGL--------------PIAVNPKPKLRALADVRIWP 201 (212)
T ss_pred CcchHHHHHHHHHHHc---CCCHHHeEEEcCchhhHHHHHhCCC--------------CeEeCcCHHHHHHHHHhcCh
Confidence 3456999999999999 9999999999999999999999997 56776663 444444443
No 146
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=98.54 E-value=1e-07 Score=99.24 Aligned_cols=70 Identities=20% Similarity=0.213 Sum_probs=58.2
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCC
Q 002979 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDD 828 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d 828 (861)
+-.|...++++++++ +.+++++++|||+.+|+.+.+.+|.. +++|++|.. ...|+|.+++
T Consensus 137 ~Kp~p~~~~~~~~~~---~~~~~~~~~iGDs~~Di~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~~~~~i~~ 202 (214)
T PRK13288 137 AKPDPEPVLKALELL---GAKPEEALMVGDNHHDILAGKNAGTK-----------TAGVAWTIKGREYLEQYKPDFMLDK 202 (214)
T ss_pred CCCCcHHHHHHHHHc---CCCHHHEEEECCCHHHHHHHHHCCCe-----------EEEEcCCCCCHHHHhhcCcCEEECC
Confidence 334789999999999 99999999999999999999999973 467778743 2358899999
Q ss_pred HhHHHHHHHH
Q 002979 829 ATDVLKLLQG 838 (861)
Q Consensus 829 ~~eV~~~L~~ 838 (861)
..++.+++..
T Consensus 203 ~~~l~~~i~~ 212 (214)
T PRK13288 203 MSDLLAIVGD 212 (214)
T ss_pred HHHHHHHHhh
Confidence 9999887754
No 147
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=98.52 E-value=1.9e-07 Score=101.02 Aligned_cols=71 Identities=24% Similarity=0.224 Sum_probs=58.1
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------Ccccceec
Q 002979 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYL 826 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l 826 (861)
+.+..|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|++|.. ...|.+.+
T Consensus 154 ~~~Kp~p~~~~~~~~~~---g~~~~~~l~IGD~~~Di~aA~~aGi~-----------~i~v~~G~~~~~~l~~~~~~~vi 219 (272)
T PRK13223 154 PQKKPDPAALLFVMKMA---GVPPSQSLFVGDSRSDVLAAKAAGVQ-----------CVALSYGYNHGRPIAEESPALVI 219 (272)
T ss_pred CCCCCCcHHHHHHHHHh---CCChhHEEEECCCHHHHHHHHHCCCe-----------EEEEecCCCCchhhhhcCCCEEE
Confidence 44455788999999999 99999999999999999999999973 467777742 24688899
Q ss_pred CCHhHHHHHHH
Q 002979 827 DDATDVLKLLQ 837 (861)
Q Consensus 827 ~d~~eV~~~L~ 837 (861)
+++.++..++.
T Consensus 220 ~~l~el~~~~~ 230 (272)
T PRK13223 220 DDLRALLPGCA 230 (272)
T ss_pred CCHHHHHHHHh
Confidence 99999886655
No 148
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=98.49 E-value=8.1e-07 Score=92.69 Aligned_cols=62 Identities=27% Similarity=0.356 Sum_probs=50.1
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecCC--HhH
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLDD--ATD 831 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~d--~~e 831 (861)
.|+..++.+++++ +++++++++|||+.+|+++++.+|. +++++.. ...|++++.+ ..+
T Consensus 152 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~Di~aa~~ag~--------------~i~~~~~~~~~~~a~~~i~~~~~~~ 214 (219)
T TIGR00338 152 YKGKTLLILLRKE---GISPENTVAVGDGANDLSMIKAAGL--------------GIAFNAKPKLQQKADICINKKDLTD 214 (219)
T ss_pred ccHHHHHHHHHHc---CCCHHHEEEEECCHHHHHHHHhCCC--------------eEEeCCCHHHHHhchhccCCCCHHH
Confidence 4899999999999 9999999999999999999999987 3455543 3678888864 466
Q ss_pred HHHH
Q 002979 832 VLKL 835 (861)
Q Consensus 832 V~~~ 835 (861)
++.+
T Consensus 215 ~~~~ 218 (219)
T TIGR00338 215 ILPL 218 (219)
T ss_pred HHhh
Confidence 6554
No 149
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=98.45 E-value=1.3e-07 Score=99.09 Aligned_cols=67 Identities=21% Similarity=0.226 Sum_probs=56.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHhH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~e 831 (861)
|+.+++.+++++ +++++++++|||+.+|+++.+.+|.. ++.|.+|.. ...+.|++++..+
T Consensus 151 ~~~~~~~~~~~~---~~~~~~~i~igD~~~Di~~a~~~g~~-----------~i~v~~g~~~~~~~~~~~~~~~i~~~~~ 216 (226)
T PRK13222 151 DPAPLLLACEKL---GLDPEEMLFVGDSRNDIQAARAAGCP-----------SVGVTYGYNYGEPIALSEPDVVIDHFAE 216 (226)
T ss_pred ChHHHHHHHHHc---CCChhheEEECCCHHHHHHHHHCCCc-----------EEEECcCCCCccchhhcCCCEEECCHHH
Confidence 678999999999 99999999999999999999999973 466776643 2357799999999
Q ss_pred HHHHHHH
Q 002979 832 VLKLLQG 838 (861)
Q Consensus 832 V~~~L~~ 838 (861)
+..+|..
T Consensus 217 l~~~l~~ 223 (226)
T PRK13222 217 LLPLLGL 223 (226)
T ss_pred HHHHHHH
Confidence 9888753
No 150
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=98.42 E-value=3.3e-06 Score=91.66 Aligned_cols=59 Identities=19% Similarity=0.282 Sum_probs=44.8
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002979 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
+++|+||+||||.+ ... +.+.+.++|++| +++|..++++|+|+......++..+..+|+
T Consensus 2 ~~~~~~D~DGtl~~---~~~-~~~ga~e~l~~L-~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~ 60 (279)
T TIGR01452 2 AQGFIFDCDGVLWL---GER-VVPGAPELLDRL-ARAGKAALFVTNNSTKSRAEYALKFARLGF 60 (279)
T ss_pred ccEEEEeCCCceEc---CCe-eCcCHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHcCC
Confidence 57999999999998 444 455599999999 789999999999876655554443334444
No 151
>cd04299 GT1_Glycogen_Phosphorylase_like This family is most closely related to the oligosaccharide phosphorylase domain family and other unidentified sequences. Oligosaccharide phosphorylase catalyzes the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The members of this family are found in bacteria and Archaea.
Probab=98.41 E-value=2.6e-05 Score=94.54 Aligned_cols=181 Identities=12% Similarity=0.050 Sum_probs=117.1
Q ss_pred eEEEeecCcccccCHHHHHHHHHHHHH--hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcc-c
Q 002979 335 KLILGIDDMDIFKGISLKLLAMEQLLQ--QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYE-P 411 (861)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~Af~~ll~--~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~-p 411 (861)
.+|.++.|+...||..+++..++++++ .+|+ ..+++|..|...-.+. .-.++.+++.+++++ +.+. .
T Consensus 479 ltigfarRfa~YKR~~Lil~dl~rl~~il~~~~--~pvQ~IfaGKAhP~d~-~gK~iIk~i~~~a~~-------p~~~~k 548 (778)
T cd04299 479 LTIGFARRFATYKRATLLLRDPERLKRLLNDPE--RPVQFIFAGKAHPADE-PGKELIQEIVEFSRR-------PEFRGR 548 (778)
T ss_pred cEEeeeecchhhhhHHHHHHHHHHHHHHhhCCC--CCeEEEEEEecCccch-HHHHHHHHHHHHHhC-------cCCCCc
Confidence 378899999999999999999999865 3444 2477777775432221 124455555555541 1222 3
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceeccc--ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAV--RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL- 488 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~--~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l- 488 (861)
|+++. ..+..--..+++.||+++.||. .|.-|+.-+-|+. .|+|-+|..-|.-.+.
T Consensus 549 Vvfle-~Yd~~lA~~LvaG~DvwLn~prrp~EAsGTSgMKA~~--------------------NG~LnlSvlDGww~E~~ 607 (778)
T cd04299 549 IVFLE-DYDMALARHLVQGVDVWLNTPRRPLEASGTSGMKAAL--------------------NGGLNLSVLDGWWDEGY 607 (778)
T ss_pred EEEEc-CCCHHHHHHHHhhhhhcccCCCCCCCCCccchHHHHH--------------------cCCeeeecccCcccccc
Confidence 44444 4555555689999999999999 7877777666666 3778888888876665
Q ss_pred --CCceEeCC------------CCHHHHHHHHHHHhc----CC-----HHHHHHHHH-HhhhhhccCCHhHHHHHHHHHH
Q 002979 489 --SGAIRVNP------------WDIDAVADAMTLAIN----MR-----DSEKQLRHE-KHYRYVSTHDVAYWARSFAQDL 544 (861)
Q Consensus 489 --~~ai~vnP------------~d~~~~A~ai~~aL~----m~-----~~e~~~r~~-~~~~~v~~~~~~~W~~~fl~~l 544 (861)
.+|+.+.+ .|.+++-+.|.+.+- .. +.+...+++ .+......+++.+.+++++..+
T Consensus 608 ~g~nGwaig~~~~~~~~~~~d~~da~~Ly~~Le~~i~p~yy~r~~~g~p~~W~~~~k~sm~~~~p~fs~~Rmv~eY~~~~ 687 (778)
T cd04299 608 DGENGWAIGDGDEYEDDEYQDAEEAEALYDLLENEVIPLFYDRDEGGYPPGWVAMMKHSMATLGPRFSAERMVREYVERF 687 (778)
T ss_pred CCCCceEeCCCccccChhhcchhhHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHhcccCCCHHHHHHHHHHHh
Confidence 34788877 555666666655442 10 222333333 3444445678888888888777
Q ss_pred HH
Q 002979 545 ER 546 (861)
Q Consensus 545 ~~ 546 (861)
..
T Consensus 688 Y~ 689 (778)
T cd04299 688 YL 689 (778)
T ss_pred HH
Confidence 53
No 152
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=98.40 E-value=1.6e-06 Score=89.51 Aligned_cols=66 Identities=18% Similarity=0.268 Sum_probs=56.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHhH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~e 831 (861)
|...++.+++++ |++++++++|||+.+|+.+.+.+|.. +++|++|.. ...|+|.++++.+
T Consensus 133 ~~~~~~~~~~~~---~~~~~~~l~igD~~~Di~aA~~~Gi~-----------~i~~~~g~~~~~~l~~~~~~~~~~~~~~ 198 (205)
T TIGR01454 133 APDIVREALRLL---DVPPEDAVMVGDAVTDLASARAAGTA-----------TVAALWGEGDAGELLAARPDFLLRKPQS 198 (205)
T ss_pred ChHHHHHHHHHc---CCChhheEEEcCCHHHHHHHHHcCCe-----------EEEEEecCCChhhhhhcCCCeeeCCHHH
Confidence 678899999999 99999999999999999999999973 578888853 3568899999999
Q ss_pred HHHHHH
Q 002979 832 VLKLLQ 837 (861)
Q Consensus 832 V~~~L~ 837 (861)
+..++.
T Consensus 199 l~~~~~ 204 (205)
T TIGR01454 199 LLALCR 204 (205)
T ss_pred HHHHhh
Confidence 887653
No 153
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=98.40 E-value=1.3e-07 Score=98.11 Aligned_cols=64 Identities=19% Similarity=0.157 Sum_probs=53.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecCCHhH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~d~~e 831 (861)
+...+.++++++ |++++++++|||+.+|+.+.+.+|.. +++|.+|.. ...|+|++++..+
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~~~igDs~~d~~aa~~aG~~-----------~i~v~~g~~~~~~l~~~~a~~~i~~~~~ 208 (213)
T TIGR01449 143 HPDPLLLAAERL---GVAPQQMVYVGDSRVDIQAARAAGCP-----------SVLLTYGYRYGEAIDLLPPDVLYDSLNE 208 (213)
T ss_pred ChHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHCCCe-----------EEEEccCCCCCcchhhcCCCeEeCCHHH
Confidence 678999999999 99999999999999999999999973 456766643 2468899999998
Q ss_pred HHHH
Q 002979 832 VLKL 835 (861)
Q Consensus 832 V~~~ 835 (861)
+..+
T Consensus 209 l~~~ 212 (213)
T TIGR01449 209 LPPL 212 (213)
T ss_pred HHhh
Confidence 8764
No 154
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=98.37 E-value=3.3e-06 Score=86.53 Aligned_cols=38 Identities=26% Similarity=0.338 Sum_probs=35.9
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+|+.+++.+++.+ |++++++++|||+.+|++|++.+|.
T Consensus 147 ~k~~~~~~~~~~~---~~~~~~~i~iGDs~~D~~~a~~ag~ 184 (201)
T TIGR01491 147 NKGEAVERLKREL---NPSLTETVAVGDSKNDLPMFEVADI 184 (201)
T ss_pred cHHHHHHHHHHHh---CCCHHHEEEEcCCHhHHHHHHhcCC
Confidence 5999999999998 9999999999999999999999997
No 155
>PLN02954 phosphoserine phosphatase
Probab=98.37 E-value=4.7e-06 Score=87.26 Aligned_cols=66 Identities=17% Similarity=0.284 Sum_probs=49.6
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------CcccceecC
Q 002979 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------PSKAKYYLD 827 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------~s~Aky~l~ 827 (861)
.+.+|..+++++++++ |. +++++|||+.||+.|.+.++.. +.+++|.. ...|+|+++
T Consensus 152 ~~~~K~~~i~~~~~~~---~~--~~~i~iGDs~~Di~aa~~~~~~------------~~~~~~~~~~~~~~~~~~~~~i~ 214 (224)
T PLN02954 152 RSGGKAEAVQHIKKKH---GY--KTMVMIGDGATDLEARKPGGAD------------LFIGYGGVQVREAVAAKADWFVT 214 (224)
T ss_pred CCccHHHHHHHHHHHc---CC--CceEEEeCCHHHHHhhhcCCCC------------EEEecCCCccCHHHHhcCCEEEC
Confidence 3456999999999887 54 6899999999999997776542 34556532 235889999
Q ss_pred CHhHHHHHH
Q 002979 828 DATDVLKLL 836 (861)
Q Consensus 828 d~~eV~~~L 836 (861)
+..++.++|
T Consensus 215 ~~~el~~~~ 223 (224)
T PLN02954 215 DFQDLIEVL 223 (224)
T ss_pred CHHHHHHhh
Confidence 999988764
No 156
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=98.37 E-value=3.4e-06 Score=89.98 Aligned_cols=54 Identities=22% Similarity=0.286 Sum_probs=45.3
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC---CChhhHHHHhccc
Q 002979 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG---RGRSSLSEWLAPC 649 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG---R~~~~l~~~~~~~ 649 (861)
.|.|+||+||||++ .+..++ .+.++|++| ++.|..|+++|| |+...+...+..+
T Consensus 1 ~~~~~~D~DGtl~~---~~~~i~-~a~~~l~~l-~~~g~~~~~~Tnn~~r~~~~~~~~l~~~ 57 (249)
T TIGR01457 1 YKGYLIDLDGTMYK---GKERIP-EAETFVHEL-QKRDIPYLFVTNNSTRTPESVAEMLASF 57 (249)
T ss_pred CCEEEEeCCCceEc---CCeeCc-CHHHHHHHH-HHCCCeEEEEeCCCCCCHHHHHHHHHHc
Confidence 36899999999999 555554 799999999 799999999995 8888888877543
No 157
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.35 E-value=6.4e-07 Score=88.48 Aligned_cols=52 Identities=15% Similarity=0.304 Sum_probs=45.8
Q ss_pred EEEecCCccccCCCCCC-----------CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHH---HHhcc
Q 002979 593 AIFLDYDGTVVPETSII-----------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS---EWLAP 648 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~-----------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~---~~~~~ 648 (861)
+|++|+||||++ ++ ..+++.+.++++++ +++|+.|+++|||+..... +|+..
T Consensus 1 iVisDIDGTL~~---sd~~~~~~~~~~~~~~~~~~~~a~~~l-~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITK---SDVLGHVVPIIGKDWTHPGVAKLYRDI-QNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcc---cccccccccccccCcCCHHHHHHHHHH-HHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 589999999999 55 67899999999999 7999999999999998874 67654
No 158
>PLN02645 phosphoglycolate phosphatase
Probab=98.31 E-value=7.4e-06 Score=90.37 Aligned_cols=60 Identities=18% Similarity=0.199 Sum_probs=48.0
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
++++|+||+||||.. .+ .+.+.+.++|++| ++.|.+++++|+|+......++..+..+|+
T Consensus 27 ~~~~~~~D~DGtl~~---~~-~~~~ga~e~l~~l-r~~g~~~~~~TN~~~~~~~~~~~~l~~lGi 86 (311)
T PLN02645 27 SVETFIFDCDGVIWK---GD-KLIEGVPETLDML-RSMGKKLVFVTNNSTKSRAQYGKKFESLGL 86 (311)
T ss_pred hCCEEEEeCcCCeEe---CC-ccCcCHHHHHHHH-HHCCCEEEEEeCCCCCCHHHHHHHHHHCCC
Confidence 468999999999998 44 4568889999999 789999999999997666666544444554
No 159
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=98.30 E-value=1.6e-06 Score=92.39 Aligned_cols=60 Identities=15% Similarity=0.057 Sum_probs=51.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----CcccceecCCHhH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~Aky~l~d~~e 831 (861)
+...+.++++++ |++++++++|||+.+|+.+-+.+|.. +++|.+|.. ...|.+++++..+
T Consensus 166 ~p~~~~~a~~~~---~~~~~~~l~vgDs~~Di~aA~~aGi~-----------~i~v~~g~~~~~l~~~~a~~vi~~~~e 230 (248)
T PLN02770 166 HPDPYLKALEVL---KVSKDHTFVFEDSVSGIKAGVAAGMP-----------VVGLTTRNPESLLMEAKPTFLIKDYED 230 (248)
T ss_pred ChHHHHHHHHHh---CCChhHEEEEcCCHHHHHHHHHCCCE-----------EEEEeCCCCHHHHhhcCCCEEeccchh
Confidence 678899999999 99999999999999999999999973 467777743 2468899998887
No 160
>PF05693 Glycogen_syn: Glycogen synthase; InterPro: IPR008631 This family consists of the eukaryotic glycogen synthase proteins GYS1, GYS2 and GYS3. Glycogen synthase (GS) is the enzyme responsible for the synthesis of -1,4-linked glucose chains in glycogen. It is the rate limiting enzyme in the synthesis of the polysaccharide, and its activity is highly regulated through phosphorylation at multiple sites and also by allosteric effectors, mainly glucose 6-phosphate (G6P) [].; GO: 0004373 glycogen (starch) synthase activity, 0005978 glycogen biosynthetic process; PDB: 3NB0_C 3RT1_C 3RSZ_D 3O3C_B 3NAZ_B 3NCH_D.
Probab=98.29 E-value=1.6e-05 Score=91.65 Aligned_cols=101 Identities=7% Similarity=0.126 Sum_probs=61.8
Q ss_pred HHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC--------CCceE
Q 002979 422 FEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL--------SGAIR 493 (861)
Q Consensus 422 ~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l--------~~ai~ 493 (861)
-++..+.+.+|++|+||.+|.+|.+|+|++|. +-|-|.|..+|....+ ..|+.
T Consensus 461 l~Y~dfv~GcdLgvFPSYYEPWGYTPlE~~a~-------------------gVPsITTnLsGFG~~~~~~~~~~~~~GV~ 521 (633)
T PF05693_consen 461 LDYYDFVRGCDLGVFPSYYEPWGYTPLECTAF-------------------GVPSITTNLSGFGCWMQEHIEDPEEYGVY 521 (633)
T ss_dssp S-HHHHHHHSSEEEE--SSBSS-HHHHHHHHT-------------------T--EEEETTBHHHHHHHTTS-HHGGGTEE
T ss_pred CCHHHHhccCceeeeccccccccCChHHHhhc-------------------CCceeeccchhHHHHHHHhhccCcCCcEE
Confidence 36778889999999999999999999999998 5568999999977444 12444
Q ss_pred -eC--CCCH----HHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHH
Q 002979 494 -VN--PWDI----DAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFA 541 (861)
Q Consensus 494 -vn--P~d~----~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl 541 (861)
|+ -.|. +++|+.|.....|+..+|.....+..+.-..-++.+-..-+.
T Consensus 522 VvdR~~~n~~e~v~~la~~l~~f~~~~~rqri~~Rn~ae~LS~~~dW~~~~~yY~ 576 (633)
T PF05693_consen 522 VVDRRDKNYDESVNQLADFLYKFCQLSRRQRIIQRNRAERLSDLADWKNFGKYYE 576 (633)
T ss_dssp EE-SSSS-HHHHHHHHHHHHHHHHT--HHHHHHHHHHHHHHGGGGBHHHHCHHHH
T ss_pred EEeCCCCCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 33 2334 455566666678888777655544444333345544443333
No 161
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=98.28 E-value=1.2e-05 Score=86.78 Aligned_cols=72 Identities=13% Similarity=0.064 Sum_probs=58.9
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------------------
Q 002979 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------------------ 818 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (861)
+...+..+++++ |+. ++++++|||+.+|+.+.+.+|. .+++|+.|..
T Consensus 160 ~p~~~~~a~~~l---~~~~~~e~l~IGDs~~Di~aA~~aG~-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 225 (267)
T PRK13478 160 YPWMALKNAIEL---GVYDVAACVKVDDTVPGIEEGLNAGM-----------WTVGVILSGNELGLSEEEYQALSAAELA 225 (267)
T ss_pred ChHHHHHHHHHc---CCCCCcceEEEcCcHHHHHHHHHCCC-----------EEEEEccCcccccCCHHHHHhcCHHHHH
Confidence 577889999999 885 6999999999999999999997 3567777743
Q ss_pred -----------CcccceecCCHhHHHHHHHHHHhhc
Q 002979 819 -----------PSKAKYYLDDATDVLKLLQGLATAS 843 (861)
Q Consensus 819 -----------~s~Aky~l~d~~eV~~~L~~L~~~~ 843 (861)
...|.+.+++..++..+|+.+....
T Consensus 226 ~~~~~~~~~l~~~~a~~vi~~~~~l~~~l~~~~~~~ 261 (267)
T PRK13478 226 ARRERARARLRAAGAHYVIDTIADLPAVIADIEARL 261 (267)
T ss_pred HHHHHHHHHHHHcCCCeehhhHHHHHHHHHHHHHHH
Confidence 2458899999999999887665543
No 162
>PRK06769 hypothetical protein; Validated
Probab=98.26 E-value=4.1e-06 Score=84.28 Aligned_cols=65 Identities=11% Similarity=0.108 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC------------ccccee
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP------------SKAKYY 825 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~------------s~Aky~ 825 (861)
+...+..+++++ +.+++++++|||+.+|+.+.+.+|. .++.|..|... ..++|.
T Consensus 95 ~p~~~~~~~~~l---~~~p~~~i~IGD~~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~l~~~~~~~~ 160 (173)
T PRK06769 95 STGMLLQAAEKH---GLDLTQCAVIGDRWTDIVAAAKVNA-----------TTILVRTGAGYDALHTYRDKWAHIEPNYI 160 (173)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHCCC-----------eEEEEecCCCchhhhhhhcccccCCCcch
Confidence 567788888888 9999999999999999999999997 35677776421 346778
Q ss_pred cCCHhHHHHHH
Q 002979 826 LDDATDVLKLL 836 (861)
Q Consensus 826 l~d~~eV~~~L 836 (861)
++++.++..+|
T Consensus 161 ~~~~~el~~~l 171 (173)
T PRK06769 161 AENFEDAVNWI 171 (173)
T ss_pred hhCHHHHHHHH
Confidence 88888887765
No 163
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.24 E-value=3.5e-06 Score=84.56 Aligned_cols=41 Identities=27% Similarity=0.388 Sum_probs=36.9
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc
Q 002979 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI 795 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a 795 (861)
.+.+.+|+.+++.+++.+ +++++++++|||+.||++|++.|
T Consensus 137 ~~~~~~K~~~l~~~~~~~---~~~~~~~~~iGDs~~D~~~~~~a 177 (177)
T TIGR01488 137 NPEGECKGKVLKELLEES---KITLKKIIAVGDSVNDLPMLKLA 177 (177)
T ss_pred cCCcchHHHHHHHHHHHh---CCCHHHEEEEeCCHHHHHHHhcC
Confidence 366788999999999988 89999999999999999999864
No 164
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=98.20 E-value=8.6e-06 Score=82.49 Aligned_cols=66 Identities=20% Similarity=0.131 Sum_probs=52.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----Cccc--ceecCCHh
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKA--KYYLDDAT 830 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~A--ky~l~d~~ 830 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. ++++..|.. ...+ .+++++..
T Consensus 105 ~p~~~~~~~~~l---~~~~~~~~~VgDs~~Di~~A~~aG~~-----------~i~v~~g~~~~~~~~~~~~~~~ii~~l~ 170 (181)
T PRK08942 105 KPGMLLSIAERL---NIDLAGSPMVGDSLRDLQAAAAAGVT-----------PVLVRTGKGVTTLAEGAAPGTWVLDSLA 170 (181)
T ss_pred CHHHHHHHHHHc---CCChhhEEEEeCCHHHHHHHHHCCCe-----------EEEEcCCCCchhhhcccCCCceeecCHH
Confidence 567888888888 99999999999999999999999973 356666642 2345 78888888
Q ss_pred HHHHHHH
Q 002979 831 DVLKLLQ 837 (861)
Q Consensus 831 eV~~~L~ 837 (861)
++.++|.
T Consensus 171 el~~~l~ 177 (181)
T PRK08942 171 DLPQALK 177 (181)
T ss_pred HHHHHHH
Confidence 8887765
No 165
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=98.20 E-value=7.3e-06 Score=87.63 Aligned_cols=65 Identities=15% Similarity=0.133 Sum_probs=53.2
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC------------------
Q 002979 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK------------------ 818 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~------------------ 818 (861)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|. .+++|++|..
T Consensus 158 ~p~~~~~a~~~l---~~~~~~~~l~IGDs~~Di~aA~~aGi-----------~~i~v~~g~~~~~~~~~~~~~~~~~~~~ 223 (253)
T TIGR01422 158 APWMALKNAIEL---GVYDVAACVKVGDTVPDIEEGRNAGM-----------WTVGLILSSNELGLSEEEYRALDPAELE 223 (253)
T ss_pred CHHHHHHHHHHc---CCCCchheEEECCcHHHHHHHHHCCC-----------eEEEEecCCcccCCCHHHHHhCCHHHHH
Confidence 677888999998 885 9999999999999999999997 3577887753
Q ss_pred -----------CcccceecCCHhHHHHHH
Q 002979 819 -----------PSKAKYYLDDATDVLKLL 836 (861)
Q Consensus 819 -----------~s~Aky~l~d~~eV~~~L 836 (861)
...|++++++..++..+|
T Consensus 224 ~~~~~~~~~l~~~~~~~v~~~~~el~~~~ 252 (253)
T TIGR01422 224 ARRAEATARLKAAGAHYVIDTLAELPAVI 252 (253)
T ss_pred HHHHHHHHHHHhcCCCEehhcHHHHHHhh
Confidence 145788888888877654
No 166
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=98.20 E-value=7.3e-06 Score=85.52 Aligned_cols=65 Identities=17% Similarity=0.108 Sum_probs=52.6
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCce-EEEEeCCC------CcccceecCCH
Q 002979 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEI-FACTVGRK------PSKAKYYLDDA 829 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~-~av~vG~~------~s~Aky~l~d~ 829 (861)
+...+..+++++ |+. ++++++|||+.+|+.+-+.+|.. + ++|..|.. ...|.+++++.
T Consensus 147 ~p~~~~~a~~~~---~~~~~~~~~~igD~~~Di~aa~~aG~~-----------~~i~~~~g~~~~~~~~~~~~~~~i~~~ 212 (220)
T TIGR03351 147 APDLILRAMELT---GVQDVQSVAVAGDTPNDLEAGINAGAG-----------AVVGVLTGAHDAEELSRHPHTHVLDSV 212 (220)
T ss_pred CHHHHHHHHHHc---CCCChhHeEEeCCCHHHHHHHHHCCCC-----------eEEEEecCCCcHHHHhhcCCceeecCH
Confidence 778999999999 887 79999999999999999999984 3 56666642 24577888888
Q ss_pred hHHHHHH
Q 002979 830 TDVLKLL 836 (861)
Q Consensus 830 ~eV~~~L 836 (861)
.++..++
T Consensus 213 ~~l~~~~ 219 (220)
T TIGR03351 213 ADLPALL 219 (220)
T ss_pred HHHHHhh
Confidence 8877654
No 167
>PRK11587 putative phosphatase; Provisional
Probab=98.16 E-value=7.7e-06 Score=85.39 Aligned_cols=61 Identities=10% Similarity=-0.039 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC---CcccceecCCHhHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK---PSKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~---~s~Aky~l~d~~eV 832 (861)
+......+++++ |++++++++|||+.+|+.+-+.+|.. +++|..|.. ...|++++++..++
T Consensus 140 ~p~~~~~~~~~~---g~~p~~~l~igDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~el 203 (218)
T PRK11587 140 EPDAYLLGAQLL---GLAPQECVVVEDAPAGVLSGLAAGCH-----------VIAVNAPADTPRLDEVDLVLHSLEQL 203 (218)
T ss_pred CcHHHHHHHHHc---CCCcccEEEEecchhhhHHHHHCCCE-----------EEEECCCCchhhhccCCEEecchhhe
Confidence 577888889999 99999999999999999999999873 345554432 24577788877765
No 168
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=98.13 E-value=5e-06 Score=87.02 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=48.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC-----cccceecCCHhH
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-----SKAKYYLDDATD 831 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~Aky~l~d~~e 831 (861)
.+...++.+++++ |++++++++|||+.+|+++.+.+|.. ++.+.-+... ..|.+++.+..+
T Consensus 149 p~~~~~~~~~~~~---~~~~~~~~~igDs~~Di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~~~~~~~~~~d 214 (222)
T PRK10826 149 PHPEVYLNCAAKL---GVDPLTCVALEDSFNGMIAAKAARMR-----------SIVVPAPEQQNDPRWALADVKLESLTE 214 (222)
T ss_pred CCHHHHHHHHHHc---CCCHHHeEEEcCChhhHHHHHHcCCE-----------EEEecCCccCchhhhhhhheeccCHHH
Confidence 4677999999999 99999999999999999999999973 2344333221 256777777777
Q ss_pred HH
Q 002979 832 VL 833 (861)
Q Consensus 832 V~ 833 (861)
+.
T Consensus 215 l~ 216 (222)
T PRK10826 215 LT 216 (222)
T ss_pred Hh
Confidence 54
No 169
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=98.12 E-value=9.8e-05 Score=84.00 Aligned_cols=134 Identities=19% Similarity=0.174 Sum_probs=81.8
Q ss_pred CCeEE--EeecCccc-ccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 002979 333 GKKLI--LGIDDMDI-FKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (861)
Q Consensus 333 ~~~vi--l~Vdrld~-~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~ 409 (861)
++++| ++.+|..+ .|+++..++|++.+.+++|+++ ++.++.+. .....+ +++.+. ++. +.
T Consensus 190 ~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~----~vi~~~~~----~~~~~~----~~~~~~----~~~-~~ 252 (385)
T TIGR00215 190 NGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLR----RVLPVVNF----KRRLQF----EQIKAE----YGP-DL 252 (385)
T ss_pred CCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeE----EEEEeCCc----hhHHHH----HHHHHH----hCC-CC
Confidence 45544 45579887 7999999999999999999876 54433221 111122 222222 211 11
Q ss_pred ccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec----------
Q 002979 410 EPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS---------- 479 (861)
Q Consensus 410 ~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S---------- 479 (861)
.+..+.+ +...+|++||++|.+| |.+.+|+++|+.| +|++
T Consensus 253 -~v~~~~~-----~~~~~l~aADl~V~~S-----Gt~tlEa~a~G~P-------------------~Vv~yk~~pl~~~~ 302 (385)
T TIGR00215 253 -QLHLIDG-----DARKAMFAADAALLAS-----GTAALEAALIKTP-------------------MVVGYRMKPLTFLI 302 (385)
T ss_pred -cEEEECc-----hHHHHHHhCCEEeecC-----CHHHHHHHHcCCC-------------------EEEEEcCCHHHHHH
Confidence 3434433 3457999999999999 6667799999665 3443
Q ss_pred -------cCCCCcccCCC--c---eEeCCCCHHHHHHHHHHHhcCC
Q 002979 480 -------EFIGCSPSLSG--A---IRVNPWDIDAVADAMTLAINMR 513 (861)
Q Consensus 480 -------e~~G~~~~l~~--a---i~vnP~d~~~~A~ai~~aL~m~ 513 (861)
.+.+.+..+.+ + ++-+--+++.+++++.+.|+.+
T Consensus 303 ~~~~~~~~~~~~~nil~~~~~~pel~q~~~~~~~l~~~~~~ll~~~ 348 (385)
T TIGR00215 303 ARRLVKTDYISLPNILANRLLVPELLQEECTPHPLAIALLLLLENG 348 (385)
T ss_pred HHHHHcCCeeeccHHhcCCccchhhcCCCCCHHHHHHHHHHHhcCC
Confidence 13333333321 1 2223346789999999999755
No 170
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=98.11 E-value=0.001 Score=74.01 Aligned_cols=300 Identities=19% Similarity=0.262 Sum_probs=171.0
Q ss_pred HHHHHHHHHHHHHHcCCCCCEEEEeCcc----cccHHHH--HHhhcCCCeEEEEEecC---------CCChHHHhcCCch
Q 002979 181 VSANKIFADKVMEVINPDDDCVWVHDYH----LMVLPTF--LRKRFNRIKLGFFLHSP---------FPSSEIYRTLPVR 245 (861)
Q Consensus 181 ~~vN~~fa~~v~~~~~p~~D~VwvhDyh----l~llp~~--lr~~~~~~~i~~flH~P---------fP~~e~f~~lp~r 245 (861)
.+.+++|+ .......|++..||+|-=- ...+|-. ||+++|+.++..+.-+| ||.+-+.+-+|..
T Consensus 32 ~r~~eRfg-~~~~~~~~~~p~vWiHaaSVGEv~a~~pLv~~l~~~~P~~~ilvTt~T~Tg~e~a~~~~~~~v~h~YlP~D 110 (419)
T COG1519 32 KRLGERFG-FYKPPVKPEGPLVWIHAASVGEVLAALPLVRALRERFPDLRILVTTMTPTGAERAAALFGDSVIHQYLPLD 110 (419)
T ss_pred HHHHHHhc-ccCCCCCCCCCeEEEEecchhHHHHHHHHHHHHHHhCCCCCEEEEecCccHHHHHHHHcCCCeEEEecCcC
Confidence 46777877 1223345667899999655 3445554 89999999999887665 2222222334422
Q ss_pred -HHHHHHh---hcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEE---------------------EEE
Q 002979 246 -DEILRGL---LNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTV---------------------YIK 300 (861)
Q Consensus 246 -~~il~~l---l~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~---------------------~i~ 300 (861)
.-..+.. ...|+.-|---+.=-|++..|.+. |+. .+-.++|-. ..-
T Consensus 111 ~~~~v~rFl~~~~P~l~Ii~EtElWPnli~e~~~~-~~p--------~~LvNaRLS~rS~~~y~k~~~~~~~~~~~i~li 181 (419)
T COG1519 111 LPIAVRRFLRKWRPKLLIIMETELWPNLINELKRR-GIP--------LVLVNARLSDRSFARYAKLKFLARLLFKNIDLI 181 (419)
T ss_pred chHHHHHHHHhcCCCEEEEEeccccHHHHHHHHHc-CCC--------EEEEeeeechhhhHHHHHHHHHHHHHHHhccee
Confidence 1122222 234554444444444555555332 111 111122110 111
Q ss_pred EecccCCchHHHHhh---------------CCchhHHHHHHHHHHcCC-CeEEEeecCcccccCHHHHHHHHHHHHHhCC
Q 002979 301 ILPVGVHMGRLESVL---------------NLPATATKIKEIEKQFDG-KKLILGIDDMDIFKGISLKLLAMEQLLQQHP 364 (861)
Q Consensus 301 v~p~GId~~~~~~~~---------------~~~~~~~~~~~l~~~~~~-~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P 364 (861)
+.-.-.|.++|.+.. ..|........+|.++++ +++++..+.- ..--...+.++..+++++|
T Consensus 182 ~aQse~D~~Rf~~LGa~~v~v~GNlKfd~~~~~~~~~~~~~~r~~l~~~r~v~iaaSTH--~GEeei~l~~~~~l~~~~~ 259 (419)
T COG1519 182 LAQSEEDAQRFRSLGAKPVVVTGNLKFDIEPPPQLAAELAALRRQLGGHRPVWVAASTH--EGEEEIILDAHQALKKQFP 259 (419)
T ss_pred eecCHHHHHHHHhcCCcceEEecceeecCCCChhhHHHHHHHHHhcCCCCceEEEecCC--CchHHHHHHHHHHHHhhCC
Confidence 112223333333221 122344566778888877 8999999883 2223347889999999999
Q ss_pred CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC-------CcccEEEEcCCCCHHHHHHHHHhcccceec
Q 002979 365 GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP-------NYEPVVLIDRPVPRFEKSAYYAVAECCIVN 437 (861)
Q Consensus 365 ~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~-------~~~pvv~~~~~v~~~el~aly~~ADv~vvt 437 (861)
+.. || +. | +.++ =-+.+++++++.+-+++.- ..++|++.+ +.-|+..||++||++.|-
T Consensus 260 ~~l----lI-lV-P---RHpE---Rf~~v~~l~~~~gl~~~~rS~~~~~~~~tdV~l~D---tmGEL~l~y~~adiAFVG 324 (419)
T COG1519 260 NLL----LI-LV-P---RHPE---RFKAVENLLKRKGLSVTRRSQGDPPFSDTDVLLGD---TMGELGLLYGIADIAFVG 324 (419)
T ss_pred Cce----EE-Ee-c---CChh---hHHHHHHHHHHcCCeEEeecCCCCCCCCCcEEEEe---cHhHHHHHHhhccEEEEC
Confidence 864 33 33 3 3333 3456777787777666431 222444444 367999999999998765
Q ss_pred cc---ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec----cCCCCcccC---CCceEeCCCCHHHHHHHHH
Q 002979 438 AV---RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS----EFIGCSPSL---SGAIRVNPWDIDAVADAMT 507 (861)
Q Consensus 438 S~---~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S----e~~G~~~~l---~~ai~vnP~d~~~~A~ai~ 507 (861)
-. .-|-| ++|+.+|+ .|+|.. .|.-+.+.| ++++.|+. .+.+++++.
T Consensus 325 GSlv~~GGHN--~LEpa~~~-------------------~pvi~Gp~~~Nf~ei~~~l~~~ga~~~v~~--~~~l~~~v~ 381 (419)
T COG1519 325 GSLVPIGGHN--PLEPAAFG-------------------TPVIFGPYTFNFSDIAERLLQAGAGLQVED--ADLLAKAVE 381 (419)
T ss_pred CcccCCCCCC--hhhHHHcC-------------------CCEEeCCccccHHHHHHHHHhcCCeEEECC--HHHHHHHHH
Confidence 43 34555 67999983 345543 344444444 34677765 777777777
Q ss_pred HHhcCCHHHHHHHHHHhhhhhccC
Q 002979 508 LAINMRDSEKQLRHEKHYRYVSTH 531 (861)
Q Consensus 508 ~aL~m~~~e~~~r~~~~~~~v~~~ 531 (861)
..++ ++++++.+.++....+..+
T Consensus 382 ~l~~-~~~~r~~~~~~~~~~v~~~ 404 (419)
T COG1519 382 LLLA-DEDKREAYGRAGLEFLAQN 404 (419)
T ss_pred HhcC-CHHHHHHHHHHHHHHHHHh
Confidence 7776 4677777777777766555
No 171
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=98.10 E-value=2.3e-05 Score=79.03 Aligned_cols=63 Identities=14% Similarity=0.039 Sum_probs=51.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC-----cccceecCCHhHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-----SKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-----s~Aky~l~d~~eV 832 (861)
+...+..+++++ |++++++++|||+.+|+...+.+|.. .++.|..|... ..|+++++++.++
T Consensus 108 ~p~~~~~a~~~~---~~~~~~~v~VGDs~~Di~aA~~aG~~----------~~i~v~~g~~~~~~~~~~ad~~i~~~~el 174 (176)
T TIGR00213 108 KPGMLLQARKEL---HIDMAQSYMVGDKLEDMQAGVAAKVK----------TNVLVRTGKPITPEAENIADWVLNSLADL 174 (176)
T ss_pred CHHHHHHHHHHc---CcChhhEEEEcCCHHHHHHHHHCCCc----------EEEEEecCCcccccccccCCEEeccHHHh
Confidence 677889999999 99999999999999999999999973 11466777532 3488999988887
Q ss_pred H
Q 002979 833 L 833 (861)
Q Consensus 833 ~ 833 (861)
.
T Consensus 175 ~ 175 (176)
T TIGR00213 175 P 175 (176)
T ss_pred h
Confidence 5
No 172
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=98.08 E-value=1.4e-05 Score=85.71 Aligned_cols=73 Identities=16% Similarity=0.152 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCHhHHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDATDVL 833 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~~eV~ 833 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|. |.. ...|++++++..++.
T Consensus 167 ~Pe~~~~a~~~l---~~~p~~~l~IgDs~~Di~aA~~aG~~-----------~i~v~-g~~~~~~l~~ad~vi~~~~el~ 231 (260)
T PLN03243 167 DPEMFMYAAERL---GFIPERCIVFGNSNSSVEAAHDGCMK-----------CVAVA-GKHPVYELSAGDLVVRRLDDLS 231 (260)
T ss_pred CHHHHHHHHHHh---CCChHHeEEEcCCHHHHHHHHHcCCE-----------EEEEe-cCCchhhhccCCEEeCCHHHHH
Confidence 678899999999 99999999999999999999999973 34554 432 246788999998864
Q ss_pred -HHHHHHHhhcCC
Q 002979 834 -KLLQGLATASSS 845 (861)
Q Consensus 834 -~~L~~L~~~~~~ 845 (861)
..++.|+....+
T Consensus 232 ~~~~~~~~~~~~~ 244 (260)
T PLN03243 232 VVDLKNLSDLDSP 244 (260)
T ss_pred HHHHhhhhccCCc
Confidence 445556554443
No 173
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=98.06 E-value=5.2e-06 Score=90.41 Aligned_cols=61 Identities=15% Similarity=0.040 Sum_probs=50.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCHhHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~eV 832 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.+|.. +++|..|... ..|++++++..++
T Consensus 204 ~p~~~~~a~~~~---~~~p~~~l~IGDs~~Di~aA~~aG~~-----------~i~v~~g~~~~~~l~~ad~vi~~~~~l 268 (286)
T PLN02779 204 DPDIYNLAAETL---GVDPSRCVVVEDSVIGLQAAKAAGMR-----------CIVTKSSYTADEDFSGADAVFDCLGDV 268 (286)
T ss_pred CHHHHHHHHHHh---CcChHHEEEEeCCHHhHHHHHHcCCE-----------EEEEccCCccccccCCCcEEECChhhc
Confidence 577899999999 99999999999999999999999973 4566666431 3588888887765
No 174
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=98.03 E-value=1.2e-05 Score=89.72 Aligned_cols=89 Identities=12% Similarity=0.085 Sum_probs=65.3
Q ss_pred CCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC
Q 002979 738 EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR 817 (861)
Q Consensus 738 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (861)
++..++.+.....-+| +......+++.+ |+.++++++|||+.+|+.+.+.+|.. +++|+.+.
T Consensus 258 yFd~Iv~sddv~~~KP----~Peifl~A~~~l---gl~Peecl~IGDS~~DIeAAk~AGm~-----------~IgV~~~~ 319 (381)
T PLN02575 258 FFSVIVAAEDVYRGKP----DPEMFIYAAQLL---NFIPERCIVFGNSNQTVEAAHDARMK-----------CVAVASKH 319 (381)
T ss_pred HceEEEecCcCCCCCC----CHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHcCCE-----------EEEECCCC
Confidence 3444555543322233 778999999999 99999999999999999999999973 45555443
Q ss_pred C---CcccceecCCHhHH-HHHHHHHHhhcC
Q 002979 818 K---PSKAKYYLDDATDV-LKLLQGLATASS 844 (861)
Q Consensus 818 ~---~s~Aky~l~d~~eV-~~~L~~L~~~~~ 844 (861)
. ...|++++++.+++ ...|+.|...-.
T Consensus 320 ~~~~l~~Ad~iI~s~~EL~~~~l~~l~~~~~ 350 (381)
T PLN02575 320 PIYELGAADLVVRRLDELSIVDLKNLADIES 350 (381)
T ss_pred ChhHhcCCCEEECCHHHHHHHHHhhhhhcCc
Confidence 2 23588899999998 677788877553
No 175
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=98.00 E-value=2.2e-05 Score=75.07 Aligned_cols=46 Identities=28% Similarity=0.423 Sum_probs=37.2
Q ss_pred eEEEecCCccccCCCC-----CCCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002979 592 RAIFLDYDGTVVPETS-----IIKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 592 klI~~DlDGTLl~~~~-----~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
|+++||+||||++... ....+.+.+.++|+.| ++.|+.++|+|+++
T Consensus 1 k~~~~D~dgtL~~~~~~~~~~~~~~~~~~v~~~l~~L-~~~g~~l~i~Sn~~ 51 (132)
T TIGR01662 1 KGVVLDLDGTLTDDVPYVDDEDERILYPEVPDALAEL-KEAGYKVVIVTNQS 51 (132)
T ss_pred CEEEEeCCCceecCCCCCCCHHHheeCCCHHHHHHHH-HHCCCEEEEEECCc
Confidence 6899999999996210 1245678999999999 78999999999876
No 176
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=97.99 E-value=1.4e-05 Score=83.46 Aligned_cols=61 Identities=16% Similarity=0.213 Sum_probs=46.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC-------cccceecCCH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-------SKAKYYLDDA 829 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~Aky~l~d~ 829 (861)
+....+.+++++ |++++++++|||+. +|+.+.+.+|.. ++.|..|... ..+.+.+++.
T Consensus 152 ~~~~~~~~~~~~---~~~~~~~~~igDs~~~di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~~~~i~~~ 217 (221)
T TIGR02253 152 HPKIFYAALKRL---GVKPEEAVMVGDRLDKDIKGAKNLGMK-----------TVWINQGKSSKMEDDVYPYPDYEISSL 217 (221)
T ss_pred CHHHHHHHHHHc---CCChhhEEEECCChHHHHHHHHHCCCE-----------EEEECCCCCcccccccccCCCeeeCcH
Confidence 667899999999 99999999999997 999999999973 2344444321 2456777777
Q ss_pred hHH
Q 002979 830 TDV 832 (861)
Q Consensus 830 ~eV 832 (861)
.++
T Consensus 218 ~el 220 (221)
T TIGR02253 218 REL 220 (221)
T ss_pred Hhh
Confidence 654
No 177
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=97.97 E-value=4.4e-05 Score=78.68 Aligned_cols=54 Identities=11% Similarity=0.135 Sum_probs=39.9
Q ss_pred CCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccce-ecCCHhHHHHHHHHHHh
Q 002979 774 RPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKY-YLDDATDVLKLLQGLAT 841 (861)
Q Consensus 774 i~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky-~l~d~~eV~~~L~~L~~ 841 (861)
..++++++|||+.||++|.+++|. +|.++... ..+.+ .+++..++.+.|.....
T Consensus 142 ~~~~~~v~iGDs~~D~~~~~aa~~--------------~v~~~~~~~~~~~~~~~~~~~~~~el~~~l~~~~~ 200 (205)
T PRK13582 142 SLGYRVIAAGDSYNDTTMLGEADA--------------GILFRPPANVIAEFPQFPAVHTYDELLAAIDKASA 200 (205)
T ss_pred HhCCeEEEEeCCHHHHHHHHhCCC--------------CEEECCCHHHHHhCCcccccCCHHHHHHHHHHHHh
Confidence 345789999999999999999986 34455432 24454 68899999888776543
No 178
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=97.97 E-value=9.5e-06 Score=76.57 Aligned_cols=51 Identities=20% Similarity=0.256 Sum_probs=41.7
Q ss_pred eEEEecCCccccCCCC---CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHH
Q 002979 592 RAIFLDYDGTVVPETS---IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (861)
Q Consensus 592 klI~~DlDGTLl~~~~---~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~ 643 (861)
|+|++|+||||+.... ....+.++++++|+++ +++|+.|+++|||+.....
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l-~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHY-KALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHH-HHCCCEEEEECCCCchhhh
Confidence 7999999999997321 1134779999999998 6899999999999987654
No 179
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=97.96 E-value=0.00012 Score=76.59 Aligned_cols=65 Identities=20% Similarity=0.198 Sum_probs=46.7
Q ss_pred CCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC------CCcccceecCCH
Q 002979 756 VSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR------KPSKAKYYLDDA 829 (861)
Q Consensus 756 vsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~Aky~l~d~ 829 (861)
..|..+++. + +..++++++|||+.||+.|.+.+|.. ++ -+. ....+.+.+++.
T Consensus 147 ~~K~~~l~~----~---~~~~~~~i~iGDs~~Di~aa~~Ag~~------------~a--~~~l~~~~~~~~~~~~~~~~f 205 (219)
T PRK09552 147 CCKPSLIRK----L---SDTNDFHIVIGDSITDLEAAKQADKV------------FA--RDFLITKCEELGIPYTPFETF 205 (219)
T ss_pred CchHHHHHH----h---ccCCCCEEEEeCCHHHHHHHHHCCcc------------ee--HHHHHHHHHHcCCCccccCCH
Confidence 457766554 4 66788999999999999999999862 22 111 123455567899
Q ss_pred hHHHHHHHHHHh
Q 002979 830 TDVLKLLQGLAT 841 (861)
Q Consensus 830 ~eV~~~L~~L~~ 841 (861)
.+|.+.|+.+-.
T Consensus 206 ~ei~~~l~~~~~ 217 (219)
T PRK09552 206 HDVQTELKHLLE 217 (219)
T ss_pred HHHHHHHHHHhc
Confidence 999999887654
No 180
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=97.95 E-value=3e-05 Score=79.68 Aligned_cols=42 Identities=17% Similarity=0.090 Sum_probs=37.8
Q ss_pred CCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 754 QGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 754 ~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.+-.|...++.++++. +++++.++++|||.+|++|++.+|..
T Consensus 152 ~g~~K~~~l~~~~~~~---~~~~~~~~~~gDs~~D~~~~~~a~~~ 193 (202)
T TIGR01490 152 KGEGKVHALAELLAEE---QIDLKDSYAYGDSISDLPLLSLVGHP 193 (202)
T ss_pred CChHHHHHHHHHHHHc---CCCHHHcEeeeCCcccHHHHHhCCCc
Confidence 4567999999999988 89999999999999999999999973
No 181
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=97.92 E-value=7.3e-05 Score=77.15 Aligned_cols=64 Identities=11% Similarity=0.063 Sum_probs=45.9
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCCc---ccc-e-ecCCH
Q 002979 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPS---KAK-Y-YLDDA 829 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s---~Ak-y-~l~d~ 829 (861)
+-.|...++.+ +.. +. +++++||+.||++|++.+|. +|++..++. .|+ + .+.+.
T Consensus 130 ~~~K~~~l~~l-~~~---~~---~~v~vGDs~nDl~ml~~Ag~--------------~ia~~ak~~~~~~~~~~~~~~~~ 188 (203)
T TIGR02137 130 KDPKRQSVIAF-KSL---YY---RVIAAGDSYNDTTMLSEAHA--------------GILFHAPENVIREFPQFPAVHTY 188 (203)
T ss_pred cchHHHHHHHH-Hhh---CC---CEEEEeCCHHHHHHHHhCCC--------------CEEecCCHHHHHhCCCCCcccCH
Confidence 34688888887 444 43 79999999999999999996 577776652 222 2 34567
Q ss_pred hHHHHHHHHH
Q 002979 830 TDVLKLLQGL 839 (861)
Q Consensus 830 ~eV~~~L~~L 839 (861)
++++..+..-
T Consensus 189 ~~~~~~~~~~ 198 (203)
T TIGR02137 189 EDLKREFLKA 198 (203)
T ss_pred HHHHHHHHHH
Confidence 7777777654
No 182
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=97.90 E-value=3e-05 Score=90.33 Aligned_cols=67 Identities=18% Similarity=0.204 Sum_probs=52.0
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCHhHH
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDATDV 832 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~~eV 832 (861)
.|...+..+++++ +++++++|||+.+|+.+.+.+|.. +++|..|.. ...|.|.+++..++
T Consensus 386 ~kP~~~~~al~~l-----~~~~~v~VGDs~~Di~aAk~AG~~-----------~I~v~~~~~~~~~~~~~d~~i~~l~el 449 (459)
T PRK06698 386 NKSDLVKSILNKY-----DIKEAAVVGDRLSDINAAKDNGLI-----------AIGCNFDFAQEDELAQADIVIDDLLEL 449 (459)
T ss_pred CCcHHHHHHHHhc-----CcceEEEEeCCHHHHHHHHHCCCe-----------EEEEeCCCCcccccCCCCEEeCCHHHH
Confidence 3667788888765 468999999999999999999973 456666642 24588999999999
Q ss_pred HHHHHHH
Q 002979 833 LKLLQGL 839 (861)
Q Consensus 833 ~~~L~~L 839 (861)
.+++...
T Consensus 450 ~~~l~~~ 456 (459)
T PRK06698 450 KGILSTV 456 (459)
T ss_pred HHHHHHH
Confidence 8887553
No 183
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=97.88 E-value=1.6e-05 Score=70.97 Aligned_cols=87 Identities=15% Similarity=0.207 Sum_probs=70.1
Q ss_pred cceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC---CceEeCCCCHHHHHHHHHHH
Q 002979 433 CCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS---GAIRVNPWDIDAVADAMTLA 509 (861)
Q Consensus 433 v~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~---~ai~vnP~d~~~~A~ai~~a 509 (861)
+++.|+..+|+++..+|+||| |+++|.+...++...+. .++.++ |++++++++..+
T Consensus 1 i~Ln~~~~~~~~~r~~E~~a~-------------------G~~vi~~~~~~~~~~~~~~~~~~~~~--~~~el~~~i~~l 59 (92)
T PF13524_consen 1 INLNPSRSDGPNMRIFEAMAC-------------------GTPVISDDSPGLREIFEDGEHIITYN--DPEELAEKIEYL 59 (92)
T ss_pred CEeeCCCCCCCchHHHHHHHC-------------------CCeEEECChHHHHHHcCCCCeEEEEC--CHHHHHHHHHHH
Confidence 467788889999999999999 45566666667777773 367777 999999999999
Q ss_pred hcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHH
Q 002979 510 INMRDSEKQLRHEKHYRYVS-THDVAYWARSFA 541 (861)
Q Consensus 510 L~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl 541 (861)
++ .+++++...++.+++|. .|++.+-++.|+
T Consensus 60 l~-~~~~~~~ia~~a~~~v~~~~t~~~~~~~il 91 (92)
T PF13524_consen 60 LE-NPEERRRIAKNARERVLKRHTWEHRAEQIL 91 (92)
T ss_pred HC-CHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 98 55677777888888887 688888888776
No 184
>PHA02597 30.2 hypothetical protein; Provisional
Probab=97.87 E-value=6.3e-05 Score=77.11 Aligned_cols=60 Identities=17% Similarity=0.098 Sum_probs=47.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHc--cccCCCCCCCCCCceEEEEeCCCC--cccceecCCHhHHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESI--LSTVSGPSLPVPPEIFACTVGRKP--SKAKYYLDDATDVL 833 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~a--g~~~~~~~~~~~~~~~av~vG~~~--s~Aky~l~d~~eV~ 833 (861)
|...+..+++++ | ++.+++|||+.+|+...+.+ |. .++.|.+|+.+ ..+.|.+++..|+.
T Consensus 132 kp~~~~~a~~~~---~--~~~~v~vgDs~~di~aA~~a~~Gi-----------~~i~~~~~~~~~~~~~~~~~~~~~~~~ 195 (197)
T PHA02597 132 KEKLFIKAKEKY---G--DRVVCFVDDLAHNLDAAHEALSQL-----------PVIHMLRGERDHIPKLAHRVKSWNDIE 195 (197)
T ss_pred cHHHHHHHHHHh---C--CCcEEEeCCCHHHHHHHHHHHcCC-----------cEEEecchhhccccchhhhhccHHHHh
Confidence 678999999998 7 78899999999999999998 87 35677777642 25557777777664
No 185
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=97.85 E-value=0.00012 Score=76.98 Aligned_cols=30 Identities=23% Similarity=0.273 Sum_probs=25.5
Q ss_pred cCCHHHHHHHHHhccceEEEecCCccccCC
Q 002979 576 RLSIDHIVSAYRKTERRAIFLDYDGTVVPE 605 (861)
Q Consensus 576 ~l~~~~~~~~y~~s~~klI~~DlDGTLl~~ 605 (861)
=.++++|.+.....+.-.|+||+||||++.
T Consensus 48 ~~~~~~~~~~~~~~~p~aViFDlDgTLlDS 77 (237)
T TIGR01672 48 WISVAQIENSLEGRPPIAVSFDIDDTVLFS 77 (237)
T ss_pred EEEHHHHHHhcCCCCCeEEEEeCCCccccC
Confidence 367899998888777669999999999994
No 186
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=97.83 E-value=9.1e-05 Score=77.76 Aligned_cols=69 Identities=13% Similarity=0.038 Sum_probs=52.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC--cccceecCCHhHHHHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP--SKAKYYLDDATDVLKL 835 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--s~Aky~l~d~~eV~~~ 835 (861)
+....+++++++ |++++++++|||+.+|+...+.+|.. .+++|+.+... ..+.....+.+++.++
T Consensus 151 ~p~~~~~~~~~~---~~~p~~~l~igDs~~di~aA~~aG~~----------~~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 217 (224)
T PRK14988 151 DQRLWQAVAEHT---GLKAERTLFIDDSEPILDAAAQFGIR----------YCLGVTNPDSGIAEKQYQRHPSLNDYRRL 217 (224)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHcCCe----------EEEEEeCCCCCccchhccCCCcHHHHHHH
Confidence 578899999999 99999999999999999999999873 12445555432 3444455677777777
Q ss_pred HHHH
Q 002979 836 LQGL 839 (861)
Q Consensus 836 L~~L 839 (861)
|+.|
T Consensus 218 ~~~l 221 (224)
T PRK14988 218 IPSL 221 (224)
T ss_pred hhhh
Confidence 7765
No 187
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=97.81 E-value=7.5e-05 Score=71.17 Aligned_cols=54 Identities=20% Similarity=0.174 Sum_probs=42.1
Q ss_pred eEEEecCCccccCCCC--CCC-------CCCHHHHHHHHHhhcCCCCeEEEECCC-ChhhHHHHh
Q 002979 592 RAIFLDYDGTVVPETS--IIK-------SPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWL 646 (861)
Q Consensus 592 klI~~DlDGTLl~~~~--~~~-------~~s~~~~~~L~~L~~~~g~~v~I~TGR-~~~~l~~~~ 646 (861)
|+|++|+||||++... ... .+-+.+.+.|+.| ++.|+.++|+|++ ........+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~L-k~~g~~l~i~Sn~~~~~~~~~~l 64 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTL-KKNGFLLALASYNDDPHVAYELL 64 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHH-HHCCeEEEEEeCCCCHHHHHHHH
Confidence 6899999999999421 111 2467999999999 7899999999999 666665555
No 188
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=97.81 E-value=3.6e-05 Score=82.08 Aligned_cols=56 Identities=16% Similarity=0.227 Sum_probs=48.9
Q ss_pred cceEEEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~---s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..++|+|||||||++ ..+.+ ++.+.++|++| ++.|+.++|+|++++..+...++.+
T Consensus 125 ~~kvIvFDLDgTLi~---~~~~v~irdPgV~EaL~~L-kekGikLaIaTS~~Re~v~~~L~~l 183 (301)
T TIGR01684 125 PPHVVVFDLDSTLIT---DEEPVRIRDPRIYDSLTEL-KKRGCILVLWSYGDRDHVVESMRKV 183 (301)
T ss_pred cceEEEEecCCCCcC---CCCccccCCHHHHHHHHHH-HHCCCEEEEEECCCHHHHHHHHHHc
Confidence 468999999999999 66554 69999999999 8999999999999999888877553
No 189
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=97.70 E-value=0.00018 Score=70.20 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|...++.+++.+ |++++++++|||+..|+.+.+.+|.
T Consensus 103 ~~~~~~~~~~~~---~~~~~e~i~IGDs~~Di~~A~~~Gi 139 (147)
T TIGR01656 103 KPGLILEALKRL---GVDASRSLVVGDRLRDLQAARNAGL 139 (147)
T ss_pred CHHHHHHHHHHc---CCChHHEEEEcCCHHHHHHHHHCCC
Confidence 777899999999 9999999999999999999999987
No 190
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=97.68 E-value=0.00023 Score=71.10 Aligned_cols=48 Identities=23% Similarity=0.325 Sum_probs=36.6
Q ss_pred cceEEEecCCccccCCCCCCC---------CCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002979 590 ERRAIFLDYDGTVVPETSIIK---------SPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~---------~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
+.|+++||+||||+...+... .+-+.+.++|++| ++.|..++|+|..+
T Consensus 12 ~~k~~~~D~Dgtl~~~~~~~~~~~~~~~~~~~~pgv~e~L~~L-k~~G~~l~I~TN~~ 68 (166)
T TIGR01664 12 QSKVAAFDLDGTLITTRSGKVFPTSASDWRFLYPEIPAKLQEL-DDEGYKIVIFTNQS 68 (166)
T ss_pred cCcEEEEeCCCceEecCCCCcccCChHHeEEecCCHHHHHHHH-HHCCCEEEEEeCCc
Confidence 468999999999998322110 1347789999999 78999999999743
No 191
>PRK09449 dUMP phosphatase; Provisional
Probab=97.65 E-value=4.4e-05 Score=79.89 Aligned_cols=66 Identities=20% Similarity=0.136 Sum_probs=49.9
Q ss_pred HHHHHHHHHHHhhcCCCC-CCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCC-C---CcccceecCCHhH
Q 002979 758 KGLVAEKVLVRMFNGGRP-PDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGR-K---PSKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~-~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~---~s~Aky~l~d~~e 831 (861)
+......+++++ |+. ++++++|||+. +|+...+.+|.. ++.+..+. . ...++|.+++..+
T Consensus 152 ~p~~~~~~~~~~---~~~~~~~~~~vgD~~~~Di~~A~~aG~~-----------~i~~~~~~~~~~~~~~~~~~i~~~~e 217 (224)
T PRK09449 152 DVAIFDYALEQM---GNPDRSRVLMVGDNLHSDILGGINAGID-----------TCWLNAHGREQPEGIAPTYQVSSLSE 217 (224)
T ss_pred CHHHHHHHHHHc---CCCCcccEEEEcCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCeEEECCHHH
Confidence 567889999998 875 48999999997 799999999973 23333222 1 1357888999999
Q ss_pred HHHHHH
Q 002979 832 VLKLLQ 837 (861)
Q Consensus 832 V~~~L~ 837 (861)
+.++|+
T Consensus 218 l~~~l~ 223 (224)
T PRK09449 218 LEQLLC 223 (224)
T ss_pred HHHHHh
Confidence 988765
No 192
>PLN02940 riboflavin kinase
Probab=97.65 E-value=6.5e-05 Score=85.16 Aligned_cols=62 Identities=13% Similarity=0.026 Sum_probs=50.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----CcccceecCCHhHHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYLDDATDVL 833 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l~d~~eV~ 833 (861)
+......+++++ |++++++++|||+.+|+.+.+.+|.. +++|+.|.. ...|.+.+++..++.
T Consensus 152 ~p~~~~~a~~~l---gv~p~~~l~VGDs~~Di~aA~~aGi~-----------~I~v~~g~~~~~~~~~ad~~i~sl~el~ 217 (382)
T PLN02940 152 SPDIFLEAAKRL---NVEPSNCLVIEDSLPGVMAGKAAGME-----------VIAVPSIPKQTHLYSSADEVINSLLDLQ 217 (382)
T ss_pred CHHHHHHHHHHc---CCChhHEEEEeCCHHHHHHHHHcCCE-----------EEEECCCCcchhhccCccEEeCCHhHcC
Confidence 678999999999 99999999999999999999999973 456666542 246777888877754
No 193
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=97.62 E-value=0.00041 Score=76.09 Aligned_cols=56 Identities=23% Similarity=0.408 Sum_probs=46.6
Q ss_pred ceEEEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002979 591 RRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~---------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
.+++++|+||||...... +..+.+.+.+.|++| ++.|..++++|||+.......+.
T Consensus 158 ~~~~~~D~dgtl~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l-~~~g~~i~i~T~r~~~~~~~~l~ 222 (300)
T PHA02530 158 PKAVIFDIDGTLAKMGGRSPYDWTKVKEDKPNPMVVELVKMY-KAAGYEIIVVSGRDGVCEEDTVE 222 (300)
T ss_pred CCEEEEECCCcCcCCCCCCccchhhcccCCCChhHHHHHHHH-HhCCCEEEEEeCCChhhHHHHHH
Confidence 579999999999983321 346789999999999 68899999999999988877764
No 194
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=97.58 E-value=0.00039 Score=79.95 Aligned_cols=121 Identities=10% Similarity=0.091 Sum_probs=90.2
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH
Q 002979 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA 429 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~ 429 (861)
...|+|++.+.++.|++. |=+ |.++- +..++.++ . +| ..++.+.+- ....+..+|.
T Consensus 291 s~~I~~i~~Lv~~lPd~~----f~I-ga~te--------~s~kL~~L-~----~y-----~nvvly~~~-~~~~l~~ly~ 346 (438)
T TIGR02919 291 SDQIEHLEEIVQALPDYH----FHI-AALTE--------MSSKLMSL-D----KY-----DNVKLYPNI-TTQKIQELYQ 346 (438)
T ss_pred HHHHHHHHHHHHhCCCcE----EEE-EecCc--------ccHHHHHH-H----hc-----CCcEEECCc-ChHHHHHHHH
Confidence 899999999999999987 544 54331 11233333 1 12 356666653 4467889999
Q ss_pred hcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEec-c-CCCCcccCCCceEeCCCCHHHHHHHHH
Q 002979 430 VAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVS-E-FIGCSPSLSGAIRVNPWDIDAVADAMT 507 (861)
Q Consensus 430 ~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~S-e-~~G~~~~l~~ai~vnP~d~~~~A~ai~ 507 (861)
.||+++.+|..||++++..||+.. |.+|+| + ..|-.+.+..+.++++.|+++++++|.
T Consensus 347 ~~dlyLdin~~e~~~~al~eA~~~--------------------G~pI~afd~t~~~~~~i~~g~l~~~~~~~~m~~~i~ 406 (438)
T TIGR02919 347 TCDIYLDINHGNEILNAVRRAFEY--------------------NLLILGFEETAHNRDFIASENIFEHNEVDQLISKLK 406 (438)
T ss_pred hccEEEEccccccHHHHHHHHHHc--------------------CCcEEEEecccCCcccccCCceecCCCHHHHHHHHH
Confidence 999999999999999999999996 334444 3 345555556688999999999999999
Q ss_pred HHhcCCH
Q 002979 508 LAINMRD 514 (861)
Q Consensus 508 ~aL~m~~ 514 (861)
++|+.+.
T Consensus 407 ~lL~d~~ 413 (438)
T TIGR02919 407 DLLNDPN 413 (438)
T ss_pred HHhcCHH
Confidence 9998663
No 195
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=97.58 E-value=0.00039 Score=68.97 Aligned_cols=37 Identities=19% Similarity=0.095 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|...++.+++.+ +++++++++|||+.+|+++.+.+|.
T Consensus 105 ~~~~~~~~~~~~---~~~~~e~l~IGD~~~Di~~A~~aGi 141 (161)
T TIGR01261 105 KIKLLEPYLKKN---LIDKARSYVIGDRETDMQLAENLGI 141 (161)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEeCCHHHHHHHHHCCC
Confidence 678889999998 9999999999999999999999997
No 196
>PRK11590 hypothetical protein; Provisional
Probab=97.56 E-value=0.00042 Score=72.04 Aligned_cols=37 Identities=19% Similarity=0.229 Sum_probs=27.7
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|-.|-..++ +.+ +.+.+.+.+.|||.||.+||+.+++
T Consensus 161 g~~K~~~l~---~~~---~~~~~~~~aY~Ds~~D~pmL~~a~~ 197 (211)
T PRK11590 161 GHEKVAQLE---RKI---GTPLRLYSGYSDSKQDNPLLYFCQH 197 (211)
T ss_pred ChHHHHHHH---HHh---CCCcceEEEecCCcccHHHHHhCCC
Confidence 344544444 344 4567788999999999999999997
No 197
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=97.51 E-value=0.00092 Score=67.02 Aligned_cols=48 Identities=23% Similarity=0.292 Sum_probs=40.7
Q ss_pred hccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002979 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
....+++++|+||||+.. ....+.+.+.++|+.| ++.|..++|+|+.+
T Consensus 22 ~~~v~~vv~D~Dgtl~~~--~~~~~~pgv~e~L~~L-k~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 22 KVGIKGVVLDKDNTLVYP--DHNEAYPALRDWIEEL-KAAGRKLLIVSNNA 69 (170)
T ss_pred HCCCCEEEEecCCccccC--CCCCcChhHHHHHHHH-HHcCCEEEEEeCCc
Confidence 357899999999999983 2336788999999999 78899999999877
No 198
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=97.40 E-value=0.0053 Score=65.69 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=40.0
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhH
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSL 642 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l 642 (861)
+++.++||+||||.. ...+-+...++|+.| +++|.+++++|..+...-
T Consensus 7 ~y~~~l~DlDGvl~~----G~~~ipga~e~l~~L-~~~g~~~iflTNn~~~s~ 54 (269)
T COG0647 7 KYDGFLFDLDGVLYR----GNEAIPGAAEALKRL-KAAGKPVIFLTNNSTRSR 54 (269)
T ss_pred hcCEEEEcCcCceEe----CCccCchHHHHHHHH-HHcCCeEEEEeCCCCCCH
Confidence 457899999999998 566778999999999 899999999996554433
No 199
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=97.39 E-value=0.00019 Score=72.42 Aligned_cols=38 Identities=8% Similarity=0.073 Sum_probs=35.3
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+....+++++++ +++++++++|||+.+|+.+.+.+|.
T Consensus 142 p~p~~~~~~~~~~---~~~~~~~v~vgD~~~di~aA~~aG~ 179 (185)
T TIGR01990 142 PDPEIFLAAAEGL---GVSPSECIGIEDAQAGIEAIKAAGM 179 (185)
T ss_pred CChHHHHHHHHHc---CCCHHHeEEEecCHHHHHHHHHcCC
Confidence 3788899999999 9999999999999999999999997
No 200
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.36 E-value=0.00026 Score=75.68 Aligned_cols=56 Identities=20% Similarity=0.202 Sum_probs=48.8
Q ss_pred cceEEEecCCccccCCCCCCCCC---CHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSP---GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~---s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..|+|+||+||||++ ..+.+ ++.+.++|.+| ++.|+.++|+|+.+...+...++.+
T Consensus 127 ~~~~i~~D~D~TL~~---~~~~v~irdp~V~EtL~eL-kekGikLaIvTNg~Re~v~~~Le~l 185 (303)
T PHA03398 127 IPHVIVFDLDSTLIT---DEEPVRIRDPFVYDSLDEL-KERGCVLVLWSYGNREHVVHSLKET 185 (303)
T ss_pred eccEEEEecCCCccC---CCCccccCChhHHHHHHHH-HHCCCEEEEEcCCChHHHHHHHHHc
Confidence 468999999999999 66666 79999999999 7999999999988888888777654
No 201
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=97.34 E-value=0.0027 Score=66.08 Aligned_cols=65 Identities=20% Similarity=0.224 Sum_probs=44.6
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC------CCcccceecCC
Q 002979 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR------KPSKAKYYLDD 828 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~------~~s~Aky~l~d 828 (861)
|..|..+++.+. ..++.+++|||+.||+.|++.++.. ++-+. ....+-+..++
T Consensus 142 g~~K~~~l~~~~-------~~~~~~i~iGDg~~D~~~a~~Ad~~--------------~ar~~l~~~~~~~~~~~~~~~~ 200 (214)
T TIGR03333 142 GCCKPSLIRKLS-------EPNDYHIVIGDSVTDVEAAKQSDLC--------------FARDYLLNECEELGLNHAPFQD 200 (214)
T ss_pred CCCHHHHHHHHh-------hcCCcEEEEeCCHHHHHHHHhCCee--------------EehHHHHHHHHHcCCCccCcCC
Confidence 345787777653 3567899999999999999999863 22221 12233344678
Q ss_pred HhHHHHHHHHHH
Q 002979 829 ATDVLKLLQGLA 840 (861)
Q Consensus 829 ~~eV~~~L~~L~ 840 (861)
..+|.+.|++..
T Consensus 201 f~di~~~l~~~~ 212 (214)
T TIGR03333 201 FYDVRKELENVK 212 (214)
T ss_pred HHHHHHHHHHHh
Confidence 899988887643
No 202
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=97.33 E-value=0.0022 Score=67.57 Aligned_cols=28 Identities=25% Similarity=0.267 Sum_probs=23.0
Q ss_pred CCHHHHHHHHHhccceEEEecCCccccC
Q 002979 577 LSIDHIVSAYRKTERRAIFLDYDGTVVP 604 (861)
Q Consensus 577 l~~~~~~~~y~~s~~klI~~DlDGTLl~ 604 (861)
.++++|.++-+..+.-.|+||+|||+++
T Consensus 49 ~~~~~~~~~~~~~~p~av~~DIDeTvld 76 (237)
T PRK11009 49 VSVAQIEKSLEGRPPMAVGFDIDDTVLF 76 (237)
T ss_pred EEHHHhhhhccCCCCcEEEEECcCcccc
Confidence 6788888877555556999999999997
No 203
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=97.33 E-value=0.00021 Score=72.48 Aligned_cols=37 Identities=11% Similarity=-0.062 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+...+..+++++ |++++++++|||+.+|+..-+.+|.
T Consensus 144 ~p~~~~~~~~~~---~~~~~~~l~igDs~~di~aA~~aG~ 180 (188)
T PRK10725 144 APDTFLRCAQLM---GVQPTQCVVFEDADFGIQAARAAGM 180 (188)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeccHhhHHHHHHCCC
Confidence 778899999999 9999999999999999999999997
No 204
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=97.32 E-value=6.1e-05 Score=76.12 Aligned_cols=37 Identities=8% Similarity=-0.063 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+...++++++++ |++++++++|||+.+|+.+.+.+|.
T Consensus 144 ~~~~~~~~~~~~---~~~~~~~v~IgD~~~di~aA~~~G~ 180 (185)
T TIGR02009 144 HPETFLLAAELL---GVSPNECVVFEDALAGVQAARAAGM 180 (185)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCC
Confidence 566788999998 9999999999999999999999987
No 205
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=97.32 E-value=0.0013 Score=68.50 Aligned_cols=66 Identities=15% Similarity=0.110 Sum_probs=49.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCHhHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~eV 832 (861)
+....+.+++++. |++++++++|||+. +|+..-+.+|.. ++.+..|..+ ..+.+.+++..++
T Consensus 154 ~~~~~~~~~~~~~--~~~~~~~v~igD~~~~di~~A~~~G~~-----------~i~~~~~~~~~~~~~~~~~~~~~~~el 220 (224)
T TIGR02254 154 DKEIFNYALERMP--KFSKEEVLMIGDSLTADIKGGQNAGLD-----------TCWMNPDMHPNPDDIIPTYEIRSLEEL 220 (224)
T ss_pred CHHHHHHHHHHhc--CCCchheEEECCCcHHHHHHHHHCCCc-----------EEEECCCCCCCCCCCCCceEECCHHHH
Confidence 5667788887652 68899999999997 899999999973 3455555322 3566888888888
Q ss_pred HHHH
Q 002979 833 LKLL 836 (861)
Q Consensus 833 ~~~L 836 (861)
..+|
T Consensus 221 ~~~~ 224 (224)
T TIGR02254 221 YEIL 224 (224)
T ss_pred HhhC
Confidence 7653
No 206
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=97.30 E-value=0.0003 Score=68.88 Aligned_cols=35 Identities=26% Similarity=0.291 Sum_probs=32.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (861)
+...+.++++++ |+++ ++++|||+.+|+.+-+.+|
T Consensus 120 ~~~~~~~~~~~~---~~~~-~~l~iGDs~~Di~aa~~aG 154 (154)
T TIGR01549 120 EPEIFLAALESL---GLPP-EVLHVGDNLNDIEGARNAG 154 (154)
T ss_pred CHHHHHHHHHHc---CCCC-CEEEEeCCHHHHHHHHHcc
Confidence 688999999999 9988 9999999999999988775
No 207
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=97.28 E-value=8.5e-05 Score=77.60 Aligned_cols=38 Identities=8% Similarity=-0.101 Sum_probs=35.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
+......+++++ |+++++|++|||+.+|+...+.+|..
T Consensus 144 ~p~~~~~a~~~~---~~~p~~~l~igDs~~di~aA~~aG~~ 181 (221)
T PRK10563 144 DPALMFHAAEAM---NVNVENCILVDDSSAGAQSGIAAGME 181 (221)
T ss_pred ChHHHHHHHHHc---CCCHHHeEEEeCcHhhHHHHHHCCCE
Confidence 788999999999 99999999999999999999999973
No 208
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=97.24 E-value=0.0013 Score=66.38 Aligned_cols=40 Identities=23% Similarity=0.189 Sum_probs=32.8
Q ss_pred ecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 752 KPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 752 ~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.+.|..|+..++.+++.. ++.+++|||+.||+.+.+.++.
T Consensus 144 ~~~g~~K~~~~~~~~~~~------~~~~i~iGD~~~D~~aa~~~d~ 183 (188)
T TIGR01489 144 CPCGCCKGKVIHKLSEPK------YQHIIYIGDGVTDVCPAKLSDV 183 (188)
T ss_pred CCCCCCHHHHHHHHHhhc------CceEEEECCCcchhchHhcCCc
Confidence 345677988888887642 6889999999999999999875
No 209
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=97.15 E-value=0.012 Score=62.30 Aligned_cols=50 Identities=22% Similarity=0.308 Sum_probs=41.7
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEEC---CCChhhHHHHhcc
Q 002979 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVS---GRGRSSLSEWLAP 648 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~T---GR~~~~l~~~~~~ 648 (861)
++||+||||++ .... .+.+.++|+.+ +..|.+++++| ||+...+.+.+..
T Consensus 1 ~lfD~DGvL~~---~~~~-~~~a~e~i~~l-~~~g~~~~~~tN~~~~~~~~~~~~l~~ 53 (236)
T TIGR01460 1 FLFDIDGVLWL---GHKP-IPGAAEALNRL-RAKGKPVVFLTNNSSRSEEDYAEKLSS 53 (236)
T ss_pred CEEeCcCccCc---CCcc-CcCHHHHHHHH-HHCCCeEEEEECCCCCCHHHHHHHHHH
Confidence 58999999999 4444 45899999999 78899999998 8999988777644
No 210
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=97.14 E-value=0.0022 Score=64.29 Aligned_cols=56 Identities=30% Similarity=0.215 Sum_probs=42.7
Q ss_pred ceEEEecCCccccCCCCC-----------------------CCCCCHHHHHHHHHhhcCCCCeEEEECCC-ChhhHHHHh
Q 002979 591 RRAIFLDYDGTVVPETSI-----------------------IKSPGPEVISVLKTLCSDPNNTVFIVSGR-GRSSLSEWL 646 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~-----------------------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR-~~~~l~~~~ 646 (861)
.|+++||+|+||.++.-. .-.+-+.+.++|+.| +++|..++|+|+. ....+...+
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~pGv~elL~~L-k~~G~~l~I~Sn~~~~~~~~~~L 80 (174)
T TIGR01685 2 PRVIVFDLDGTLWDHYMISLLGGPFKPVKQNNSIIIDKSGTEVTLIKEVRDVLQTL-KDAGTYLATASWNDVPEWAYEIL 80 (174)
T ss_pred CcEEEEeCCCCCcCcccccccCCCceeccCCCCeEEeCCCCEEEEcccHHHHHHHH-HHCCCEEEEEeCCCChHHHHHHH
Confidence 689999999999984310 012347888999998 7889999999988 777777666
Q ss_pred c
Q 002979 647 A 647 (861)
Q Consensus 647 ~ 647 (861)
.
T Consensus 81 ~ 81 (174)
T TIGR01685 81 G 81 (174)
T ss_pred H
Confidence 3
No 211
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=97.13 E-value=0.0017 Score=82.77 Aligned_cols=61 Identities=10% Similarity=0.023 Sum_probs=50.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC-----CcccceecCCHhHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-----PSKAKYYLDDATDV 832 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-----~s~Aky~l~d~~eV 832 (861)
+......+++++ |++++++++|||+.+|+...+.+|. .+++|..|.. ...|.+.+++..++
T Consensus 220 ~Pe~~~~a~~~l---gv~p~e~v~IgDs~~Di~AA~~aGm-----------~~I~v~~~~~~~~L~~~~a~~vi~~l~el 285 (1057)
T PLN02919 220 APDIFLAAAKIL---GVPTSECVVIEDALAGVQAARAAGM-----------RCIAVTTTLSEEILKDAGPSLIRKDIGNI 285 (1057)
T ss_pred CHHHHHHHHHHc---CcCcccEEEEcCCHHHHHHHHHcCC-----------EEEEECCCCCHHHHhhCCCCEEECChHHC
Confidence 678889999999 9999999999999999999999997 3456665532 25677889998886
No 212
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=97.11 E-value=0.0017 Score=77.58 Aligned_cols=64 Identities=16% Similarity=0.278 Sum_probs=51.8
Q ss_pred HHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCC-CeEEEECCCChhhHHHHhcc
Q 002979 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPN-NTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g-~~v~I~TGR~~~~l~~~~~~ 648 (861)
+.+.....+.+++..||+++..-.....+-+.+.++|+.| ++.| +.++++||.+...+..+.+.
T Consensus 357 ~~~~~~g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L-~~~g~i~v~ivTgd~~~~a~~i~~~ 421 (556)
T TIGR01525 357 NEGESQGKTVVFVAVDGELLGVIALRDQLRPEAKEAIAAL-KRAGGIKLVMLTGDNRSAAEAVAAE 421 (556)
T ss_pred HHHhhCCcEEEEEEECCEEEEEEEecccchHhHHHHHHHH-HHcCCCeEEEEeCCCHHHHHHHHHH
Confidence 3455566788999999988863223566889999999999 7889 99999999999999988854
No 213
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=97.06 E-value=0.015 Score=61.78 Aligned_cols=47 Identities=19% Similarity=0.311 Sum_probs=39.4
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
++++++||+||||.. ...+.+.+.++|++| ++.|..++|+|..+...
T Consensus 7 ~~~~~~~D~dG~l~~----~~~~~pga~e~L~~L-~~~G~~~~ivTN~~~~~ 53 (242)
T TIGR01459 7 DYDVFLLDLWGVIID----GNHTYPGAVQNLNKI-IAQGKPVYFVSNSPRNI 53 (242)
T ss_pred cCCEEEEeccccccc----CCccCccHHHHHHHH-HHCCCEEEEEeCCCCCh
Confidence 367999999999998 345789999999999 78999999998866543
No 214
>PRK10671 copA copper exporting ATPase; Provisional
Probab=97.02 E-value=0.003 Score=79.06 Aligned_cols=138 Identities=17% Similarity=0.223 Sum_probs=96.1
Q ss_pred HHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEE
Q 002979 583 VSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFI 662 (861)
Q Consensus 583 ~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i 662 (861)
...+.....+.+++-.||+++..-.-...+-+...++|++| ++.|+.++++||.+...++.+.+.+ ++..
T Consensus 622 ~~~~~~~g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L-~~~gi~v~~~Tgd~~~~a~~ia~~l---gi~~------ 691 (834)
T PRK10671 622 ITAQASQGATPVLLAVDGKAAALLAIRDPLRSDSVAALQRL-HKAGYRLVMLTGDNPTTANAIAKEA---GIDE------ 691 (834)
T ss_pred HHHHHhCCCeEEEEEECCEEEEEEEccCcchhhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc---CCCE------
Confidence 34455556778888889987641113445667888999998 7899999999999999988887432 2200
Q ss_pred EeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEE
Q 002979 663 RWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVV 742 (861)
Q Consensus 663 ~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v 742 (861)
.+.
T Consensus 692 ------------------------------------------------~~~----------------------------- 694 (834)
T PRK10671 692 ------------------------------------------------VIA----------------------------- 694 (834)
T ss_pred ------------------------------------------------EEe-----------------------------
Confidence 000
Q ss_pred EEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC---
Q 002979 743 KRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP--- 819 (861)
Q Consensus 743 ~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~--- 819 (861)
++.|. .|..+++.+. ...+.++++||+.||.+|++.+|. +|++|+..
T Consensus 695 -------~~~p~--~K~~~i~~l~-------~~~~~v~~vGDg~nD~~al~~Agv--------------gia~g~g~~~a 744 (834)
T PRK10671 695 -------GVLPD--GKAEAIKRLQ-------SQGRQVAMVGDGINDAPALAQADV--------------GIAMGGGSDVA 744 (834)
T ss_pred -------CCCHH--HHHHHHHHHh-------hcCCEEEEEeCCHHHHHHHHhCCe--------------eEEecCCCHHH
Confidence 01122 2666666553 345789999999999999999985 78888753
Q ss_pred -cccceec--CCHhHHHHHHH
Q 002979 820 -SKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 820 -s~Aky~l--~d~~eV~~~L~ 837 (861)
..|++.+ ++.+++..+++
T Consensus 745 ~~~ad~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 745 IETAAITLMRHSLMGVADALA 765 (834)
T ss_pred HHhCCEEEecCCHHHHHHHHH
Confidence 4555554 67888888886
No 215
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=97.01 E-value=0.0016 Score=67.60 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=27.5
Q ss_pred CCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 755 GVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
|..|-..++.. + +.+.+.+.+.|||.||.+||+.+++
T Consensus 160 g~~Kv~rl~~~---~---~~~~~~~~aYsDS~~D~pmL~~a~~ 196 (210)
T TIGR01545 160 GHEKVAQLEQK---I---GSPLKLYSGYSDSKQDNPLLAFCEH 196 (210)
T ss_pred ChHHHHHHHHH---h---CCChhheEEecCCcccHHHHHhCCC
Confidence 44455544443 3 4456778999999999999999997
No 216
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=97.01 E-value=0.0011 Score=70.37 Aligned_cols=37 Identities=16% Similarity=0.048 Sum_probs=33.9
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~ 797 (861)
+......+++++ |++++++++|||+ ..|+..-+.+|.
T Consensus 165 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~A~~aG~ 202 (238)
T PRK10748 165 FSDMYHLAAEKL---NVPIGEILHVGDDLTTDVAGAIRCGM 202 (238)
T ss_pred cHHHHHHHHHHc---CCChhHEEEEcCCcHHHHHHHHHCCC
Confidence 677888889998 9999999999999 599999999997
No 217
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=96.99 E-value=0.0075 Score=67.26 Aligned_cols=39 Identities=18% Similarity=0.141 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.|...+..+++.+ +++++++++|||+.+|+...+.+|..
T Consensus 105 P~p~~l~~a~~~l---~v~~~~svmIGDs~sDi~aAk~aGi~ 143 (354)
T PRK05446 105 PKTGLVEEYLAEG---AIDLANSYVIGDRETDVQLAENMGIK 143 (354)
T ss_pred CCHHHHHHHHHHc---CCCcccEEEEcCCHHHHHHHHHCCCe
Confidence 3677888888888 89999999999999999999999973
No 218
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=96.95 E-value=0.00067 Score=69.78 Aligned_cols=37 Identities=19% Similarity=0.209 Sum_probs=33.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~ 797 (861)
+....+++++++ |++++++++|||+. +|+...+.+|.
T Consensus 162 ~~~~~~~~~~~~---~~~~~~~~~IgD~~~~Di~~A~~aG~ 199 (203)
T TIGR02252 162 DPKIFQEALERA---GISPEEALHIGDSLRNDYQGARAAGW 199 (203)
T ss_pred CHHHHHHHHHHc---CCChhHEEEECCCchHHHHHHHHcCC
Confidence 456789999999 99999999999997 89999999986
No 219
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=96.91 E-value=0.0049 Score=68.37 Aligned_cols=115 Identities=12% Similarity=0.073 Sum_probs=81.7
Q ss_pred cceEEEecCCccccCCCCCC--------CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEE
Q 002979 590 ERRAIFLDYDGTVVPETSII--------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~--------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~ 661 (861)
.+|+|++|+|+||....-.. ..+.+.+.++|++| +++|+.++|+|..+...+...+..-+. +
T Consensus 2 ~~k~~v~DlDnTlw~gv~~e~g~~~i~~~~~~~~~~e~L~~L-~~~Gi~lai~S~n~~~~a~~~l~~~~~--~------- 71 (320)
T TIGR01686 2 ALKVLVLDLDNTLWGGVLGEDGIDNLNLSPLHKTLQEKIKTL-KKQGFLLALASKNDEDDAKKVFERRKD--F------- 71 (320)
T ss_pred CeEEEEEcCCCCCCCCEEccCCccccccCccHHHHHHHHHHH-HhCCCEEEEEcCCCHHHHHHHHHhCcc--c-------
Confidence 36899999999999732101 12347899999999 799999999999998888777632100 0
Q ss_pred EEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEE
Q 002979 662 IRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAV 741 (861)
Q Consensus 662 i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~ 741 (861)
... .++ ...
T Consensus 72 ------------~~~------------~~~-----------------------------------------------f~~ 80 (320)
T TIGR01686 72 ------------ILQ------------AED-----------------------------------------------FDA 80 (320)
T ss_pred ------------cCc------------HHH-----------------------------------------------eeE
Confidence 000 000 001
Q ss_pred EEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 742 VKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 742 v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+..+ .. .|...++.+++++ |++++.+++|||+..|+.+.+.+.-
T Consensus 81 ~~~~-----~~----pk~~~i~~~~~~l---~i~~~~~vfidD~~~d~~~~~~~lp 124 (320)
T TIGR01686 81 RSIN-----WG----PKSESLRKIAKKL---NLGTDSFLFIDDNPAERANVKITLP 124 (320)
T ss_pred EEEe-----cC----chHHHHHHHHHHh---CCCcCcEEEECCCHHHHHHHHHHCC
Confidence 1111 12 4999999999999 9999999999999999999988653
No 220
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=96.86 E-value=0.0033 Score=74.74 Aligned_cols=132 Identities=18% Similarity=0.234 Sum_probs=93.4
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCC-eEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCc
Q 002979 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNN-TVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKT 667 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~-~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~ 667 (861)
...+.++.-.||++...-.....+-+.+.++|++| ++.|+ +++++||.+...++.+.+.+ |+-
T Consensus 340 ~~~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L-~~~Gi~~v~vvTgd~~~~a~~i~~~l---gi~------------ 403 (536)
T TIGR01512 340 AGKTIVHVARDGTYLGYILLSDEPRPDAAEAIAEL-KALGIEKVVMLTGDRRAVAERVAREL---GID------------ 403 (536)
T ss_pred CCCeEEEEEECCEEEEEEEEeccchHHHHHHHHHH-HHcCCCcEEEEcCCCHHHHHHHHHHc---CCh------------
Confidence 33456677778887752223456789999999999 79999 99999999999999988543 320
Q ss_pred ceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCe
Q 002979 668 SEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQH 747 (861)
Q Consensus 668 ~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~ 747 (861)
+.|.
T Consensus 404 ----------------------~~f~------------------------------------------------------ 407 (536)
T TIGR01512 404 ----------------------EVHA------------------------------------------------------ 407 (536)
T ss_pred ----------------------hhhh------------------------------------------------------
Confidence 0000
Q ss_pred EEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----Cccc
Q 002979 748 IVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKA 822 (861)
Q Consensus 748 ~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~A 822 (861)
++.| -.|...++++.+ ..++++++||+.||.+|++.++. +|++| ++ ...|
T Consensus 408 --~~~p--~~K~~~i~~l~~-------~~~~v~~vGDg~nD~~al~~A~v--------------gia~g~~~~~~~~~~a 462 (536)
T TIGR01512 408 --ELLP--EDKLEIVKELRE-------KYGPVAMVGDGINDAPALAAADV--------------GIAMGASGSDVAIETA 462 (536)
T ss_pred --ccCc--HHHHHHHHHHHh-------cCCEEEEEeCCHHHHHHHHhCCE--------------EEEeCCCccHHHHHhC
Confidence 0001 135555555533 34799999999999999999985 78888 43 3567
Q ss_pred ceec--CCHhHHHHHHH
Q 002979 823 KYYL--DDATDVLKLLQ 837 (861)
Q Consensus 823 ky~l--~d~~eV~~~L~ 837 (861)
++++ ++..++.++++
T Consensus 463 d~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 463 DVVLLNDDLSRLPQAIR 479 (536)
T ss_pred CEEEECCCHHHHHHHHH
Confidence 8888 78888877654
No 221
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=96.77 E-value=0.006 Score=73.51 Aligned_cols=140 Identities=13% Similarity=0.188 Sum_probs=99.5
Q ss_pred HHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcE
Q 002979 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (861)
Q Consensus 581 ~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (861)
...+.+.+...+.+++-+|++++..-.-...+-+++.+++++| ++.|++++++||-....+..+.+++ |+..
T Consensus 416 ~~~~~~a~~G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l-~~~Gi~v~miTGD~~~ta~~iA~~l---GI~~---- 487 (675)
T TIGR01497 416 QAVDQVARQGGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQL-RKMGIKTIMITGDNRLTAAAIAAEA---GVDD---- 487 (675)
T ss_pred HHHHHHHhCCCeEEEEEECCEEEEEEEecccchhHHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHHc---CCCE----
Confidence 3445555666788888888887752223556789999999998 8999999999999999999998543 3310
Q ss_pred EEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCE
Q 002979 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA 740 (861)
Q Consensus 661 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~ 740 (861)
+ +
T Consensus 488 -------------------------------------------------v-~---------------------------- 489 (675)
T TIGR01497 488 -------------------------------------------------F-I---------------------------- 489 (675)
T ss_pred -------------------------------------------------E-E----------------------------
Confidence 0 0
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--
Q 002979 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-- 818 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (861)
-++.|. +|...++.+.++ | ..|+++||+.||.++++.++. ++++|++
T Consensus 490 --------a~~~Pe--dK~~~v~~lq~~----g---~~VamvGDG~NDapAL~~Adv--------------GiAm~~gt~ 538 (675)
T TIGR01497 490 --------AEATPE--DKIALIRQEQAE----G---KLVAMTGDGTNDAPALAQADV--------------GVAMNSGTQ 538 (675)
T ss_pred --------cCCCHH--HHHHHHHHHHHc----C---CeEEEECCCcchHHHHHhCCE--------------eEEeCCCCH
Confidence 012232 377777776543 2 369999999999999999985 7888864
Q ss_pred --Ccccceec--CCHhHHHHHHH
Q 002979 819 --PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 --~s~Aky~l--~d~~eV~~~L~ 837 (861)
+..|++++ +++..+.+.++
T Consensus 539 ~akeaadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 539 AAKEAANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred HHHHhCCEEECCCCHHHHHHHHH
Confidence 45677765 45777666655
No 222
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.76 E-value=0.0081 Score=63.04 Aligned_cols=47 Identities=28% Similarity=0.374 Sum_probs=38.6
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
--|.+..||..++.+++.....|...+.|++|||+.||.-....++.
T Consensus 144 ~C~~NmCK~~il~~~~~~~~~~g~~~~rviYiGDG~nD~Cp~~~L~~ 190 (234)
T PF06888_consen 144 LCPPNMCKGKILERLLQEQAQRGVPYDRVIYIGDGRNDFCPALRLRP 190 (234)
T ss_pred cCCCccchHHHHHHHHHHHhhcCCCcceEEEECCCCCCcCcccccCC
Confidence 44778899999999998754457889999999999999877766543
No 223
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=96.72 E-value=0.0012 Score=67.58 Aligned_cols=34 Identities=15% Similarity=-0.059 Sum_probs=30.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFES 794 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (861)
+...+..+++++ |++++++++|||+.+|+.+.+.
T Consensus 163 ~p~~~~~~~~~~---~~~~~~~i~vGD~~~Di~aA~~ 196 (197)
T TIGR01548 163 NPEPLILAAKAL---GVEACHAAMVGDTVDDIITGRK 196 (197)
T ss_pred CHHHHHHHHHHh---CcCcccEEEEeCCHHHHHHHHh
Confidence 678889999998 9999999999999999987664
No 224
>KOG3120 consensus Predicted haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=96.72 E-value=0.0084 Score=60.80 Aligned_cols=49 Identities=22% Similarity=0.378 Sum_probs=39.8
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHH-HHHHc
Q 002979 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDED-MFESI 795 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~-Mf~~a 795 (861)
+....-|++.-||..+..+.......|+..+.++++||+.||+- |++..
T Consensus 153 hsC~~CPsNmCKg~Vl~~~~~s~~~~gv~yer~iYvGDG~nD~CP~l~Lr 202 (256)
T KOG3120|consen 153 HSCNLCPSNMCKGLVLDELVASQLKDGVRYERLIYVGDGANDFCPVLRLR 202 (256)
T ss_pred CccCcCchhhhhhHHHHHHHHHHhhcCCceeeEEEEcCCCCCcCcchhcc
Confidence 34456788999999999998877677999999999999999984 44433
No 225
>PRK08238 hypothetical protein; Validated
Probab=96.67 E-value=0.0076 Score=70.14 Aligned_cols=36 Identities=11% Similarity=0.117 Sum_probs=28.3
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 612 ~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+.+.+.+.|+++ +++|..++++|+.+...++.+.+.
T Consensus 73 ~~pga~e~L~~l-k~~G~~v~LaTas~~~~a~~i~~~ 108 (479)
T PRK08238 73 YNEEVLDYLRAE-RAAGRKLVLATASDERLAQAVAAH 108 (479)
T ss_pred CChhHHHHHHHH-HHCCCEEEEEeCCCHHHHHHHHHH
Confidence 347788888888 788888888888888888777643
No 226
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=96.65 E-value=0.0077 Score=71.99 Aligned_cols=60 Identities=12% Similarity=0.221 Sum_probs=48.6
Q ss_pred hccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 588 KTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
....+.++++.||+++..-.-...+-+...++|++| ++.|+.++++||.+...++.+.+.
T Consensus 382 ~~g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~L-k~~Gi~v~ilSgd~~~~a~~ia~~ 441 (562)
T TIGR01511 382 EQGSTSVLVAVNGELAGVFALEDQLRPEAKEVIQAL-KRRGIEPVMLTGDNRKTAKAVAKE 441 (562)
T ss_pred hCCCEEEEEEECCEEEEEEEecccccHHHHHHHHHH-HHcCCeEEEEcCCCHHHHHHHHHH
Confidence 344678999999998762213556789999999999 789999999999999998888743
No 227
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=96.61 E-value=0.0061 Score=63.08 Aligned_cols=37 Identities=16% Similarity=0.157 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.....+.+++++ |++++++++|||+..|+.+-+.+|.
T Consensus 154 ~p~~~~~~~~~~---g~~~~~~l~i~D~~~di~aA~~aG~ 190 (211)
T TIGR02247 154 DPRIYQLMLERL---GVAPEECVFLDDLGSNLKPAAALGI 190 (211)
T ss_pred CHHHHHHHHHHc---CCCHHHeEEEcCCHHHHHHHHHcCC
Confidence 466888999999 9999999999999999999999997
No 228
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.53 E-value=0.018 Score=72.66 Aligned_cols=165 Identities=17% Similarity=0.277 Sum_probs=101.8
Q ss_pred HHHHHhccceEEEecCCc-----cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEec
Q 002979 583 VSAYRKTERRAIFLDYDG-----TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAE 657 (861)
Q Consensus 583 ~~~y~~s~~klI~~DlDG-----TLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliae 657 (861)
.+.|.+...|.+++=+++ |++..-....++-+.+.++++++ ++.|+.++++||-+......+.+. +|+...
T Consensus 495 ~~~~a~~G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l-~~~Gi~v~miTGD~~~tA~~ia~~---~Gi~~~ 570 (884)
T TIGR01522 495 AAEMASAGLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTL-ITGGVRIIMITGDSQETAVSIARR---LGMPSK 570 (884)
T ss_pred HHHHHhcCCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCCC
Confidence 344555567888877665 44432223556789999999998 899999999999999999999854 455332
Q ss_pred CcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcC
Q 002979 658 HGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN 737 (861)
Q Consensus 658 nG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~ 737 (861)
++..+ . |..++ .. ..++ +.+.+.+
T Consensus 571 ~~~~v------------~----------------------g~~l~-----------~~-------~~~~----l~~~~~~ 594 (884)
T TIGR01522 571 TSQSV------------S----------------------GEKLD-----------AM-------DDQQ----LSQIVPK 594 (884)
T ss_pred CCcee------------E----------------------hHHhH-----------hC-------CHHH----HHHHhhc
Confidence 21110 0 00000 00 0011 1122221
Q ss_pred CCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC
Q 002979 738 EPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR 817 (861)
Q Consensus 738 ~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (861)
. . -+-.+.|. .|...++.+-+ . | +.|.++||+.||.+|++.|+. +|++|.
T Consensus 595 ~--~-----Vfar~~P~--~K~~iv~~lq~-~---g---~~v~mvGDGvND~pAl~~AdV--------------Gia~g~ 644 (884)
T TIGR01522 595 V--A-----VFARASPE--HKMKIVKALQK-R---G---DVVAMTGDGVNDAPALKLADI--------------GVAMGQ 644 (884)
T ss_pred C--e-----EEEECCHH--HHHHHHHHHHH-C---C---CEEEEECCCcccHHHHHhCCe--------------eEecCC
Confidence 1 1 11233343 47666665432 2 3 689999999999999999985 778874
Q ss_pred -C----Ccccceec--CCHhHHHHHHH
Q 002979 818 -K----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 818 -~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
. +..|++++ ++...+.++++
T Consensus 645 ~g~~va~~aaDivl~dd~~~~i~~~i~ 671 (884)
T TIGR01522 645 TGTDVAKEAADMILTDDDFATILSAIE 671 (884)
T ss_pred CcCHHHHHhcCEEEcCCCHHHHHHHHH
Confidence 2 35678888 56777777655
No 229
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.53 E-value=0.0033 Score=65.70 Aligned_cols=64 Identities=22% Similarity=0.315 Sum_probs=48.7
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEeCCc-chHHHHHHccccCCCCCCCCCCceEEEEeCCCC-------cccceecCCHh
Q 002979 759 GLVAEKVLVRMFNGGRPPDFVMCVGDDR-SDEDMFESILSTVSGPSLPVPPEIFACTVGRKP-------SKAKYYLDDAT 830 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~~d~vlaiGD~~-ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~-------s~Aky~l~d~~ 830 (861)
...-+.+++++ |+++++++.|||+. ||+.-.+.+|.. +|-+.... ..+.+.+.+..
T Consensus 157 ~~~f~~~~~~~---g~~p~~~l~VgD~~~~di~gA~~~G~~-------------~vwi~~~~~~~~~~~~~~~~~i~~l~ 220 (229)
T COG1011 157 PEIFEYALEKL---GVPPEEALFVGDSLENDILGARALGMK-------------TVWINRGGKPLPDALEAPDYEISSLA 220 (229)
T ss_pred cHHHHHHHHHc---CCCcceEEEECCChhhhhHHHHhcCcE-------------EEEECCCCCCCCCCccCCceEEcCHH
Confidence 46778889999 99999999999985 887999999873 55444322 35667778888
Q ss_pred HHHHHHHH
Q 002979 831 DVLKLLQG 838 (861)
Q Consensus 831 eV~~~L~~ 838 (861)
++..++..
T Consensus 221 ~l~~~~~~ 228 (229)
T COG1011 221 ELLDLLER 228 (229)
T ss_pred HHHHHHhh
Confidence 88877754
No 230
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.48 E-value=0.0055 Score=59.92 Aligned_cols=30 Identities=20% Similarity=0.172 Sum_probs=25.6
Q ss_pred HHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 765 VLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 765 ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.++.+ |.+++++++|||+.+|+.+...++.
T Consensus 107 ~l~~l---~~~p~~~i~i~Ds~~~~~aa~~ngI 136 (148)
T smart00577 107 DLSLL---GRDLSNVIIIDDSPDSWPFHPENLI 136 (148)
T ss_pred cHHHc---CCChhcEEEEECCHHHhhcCccCEE
Confidence 36667 8999999999999999998877765
No 231
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=96.46 E-value=0.12 Score=56.90 Aligned_cols=203 Identities=21% Similarity=0.263 Sum_probs=111.6
Q ss_pred CCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc-------
Q 002979 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC------- 649 (861)
Q Consensus 577 l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~------- 649 (861)
|++.++..--+..+-+|+-||=|+||.+.. ..-..+..++.-|-+| -..|+.|.|+|.=.+....++..++
T Consensus 133 LN~AQi~al~~~~~L~LvTFDgDvTLY~DG-~sl~~d~pvi~~ii~L-L~~gv~VgIVTAAGY~~a~kY~~RL~GLL~a~ 210 (408)
T PF06437_consen 133 LNTAQIMALAKNYGLKLVTFDGDVTLYEDG-ASLEPDNPVIPRIIKL-LRRGVKVGIVTAAGYPGAEKYEERLHGLLDAF 210 (408)
T ss_pred HHHHHHHHhcccCCceEEEEcCCcccccCC-CCCCCCchHHHHHHHH-HhcCCeEEEEeCCCCCChHHHHHHHHHHHHHH
Confidence 444555444444478999999999999933 1222356666666666 4789999999987776655544332
Q ss_pred c---CCc---------eEecCcEEEEeCCc----------ceEEecCCccChHHH--------HHHHHHHHHHhhc--CC
Q 002979 650 E---MLG---------IAAEHGYFIRWNKT----------SEWETNHLGADLEWK--------KIVEPVMRSYTEA--TD 697 (861)
Q Consensus 650 ~---~lg---------liaenG~~i~~~~~----------~~~~~~~~~~~~~w~--------~~v~~i~~~y~~~--~~ 697 (861)
. .+. +.+|.-+..+.... ..|... .-..|. +.++..+.....+ .|
T Consensus 211 ~~~~~Lt~~qk~~l~VMGGEsNYLfr~~~~~~~~L~~v~~~~W~~~---~m~~W~~~dI~~lLD~AE~~L~~~~~~l~Lp 287 (408)
T PF06437_consen 211 KDSTDLTPEQKSNLYVMGGESNYLFRYDPESPHGLEFVPREEWLLP---EMKTWSEEDITELLDIAEAALRDCVKRLNLP 287 (408)
T ss_pred HhccCCCHHHhcCEEEecccceeEEEecCCCCCCeEEccHHhccCc---cccCcCHHHHHHHHHHHHHHHHHHHHHcCCC
Confidence 1 111 22344455554432 223211 111242 2222233333322 23
Q ss_pred CceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcC------CCEEEEEcCe--EEEEecCCCCHHHHHHHHHHHh
Q 002979 698 GSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLAN------EPAVVKRGQH--IVEVKPQGVSKGLVAEKVLVRM 769 (861)
Q Consensus 698 gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~------~~~~v~~g~~--~vEI~p~gvsKg~al~~ll~~l 769 (861)
..+-.|+-++..... ....+...+.+|+.-.++..+.. .++....|.. +++|=. |.-|++.+.+.+
T Consensus 288 -a~IiRK~RAVGivP~-~~~ki~rE~LEE~VL~vq~~L~~~~~~~~ipfCAFNGGsDVwVDIGd----Ks~GV~~lQ~y~ 361 (408)
T PF06437_consen 288 -ATIIRKERAVGIVPK-PGVKIIREQLEEIVLTVQKTLEESPPGRRIPFCAFNGGSDVWVDIGD----KSLGVRALQKYF 361 (408)
T ss_pred -eeEEeecceeeEecC-CCCcchhhhHHHHHHHHHHHHHhcCCCCCCceeeecCCcceEEEcCC----cHHhHHHHHHHH
Confidence 445556666555432 11222334555554444444432 3455555433 567654 888988877766
Q ss_pred -hcCCCCCCeEEEEeCC-----cchHH
Q 002979 770 -FNGGRPPDFVMCVGDD-----RSDED 790 (861)
Q Consensus 770 -~~~gi~~d~vlaiGD~-----~ND~~ 790 (861)
...++.+.+++-+||- .||..
T Consensus 362 ~~~~~i~~~~tLHVGDQF~s~GaNDfk 388 (408)
T PF06437_consen 362 DPEGGIKPSETLHVGDQFLSAGANDFK 388 (408)
T ss_pred HhccCCCccceeeehhhhhccCCcchh
Confidence 1237999999999994 37754
No 232
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=96.46 E-value=0.0069 Score=61.98 Aligned_cols=37 Identities=24% Similarity=0.194 Sum_probs=34.5
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |+++++++.|||+.+|+...+.+|.
T Consensus 150 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~Di~~A~~~G~ 186 (198)
T TIGR01428 150 APQVYQLALEAL---GVPPDEVLFVASNPWDLGGAKKFGF 186 (198)
T ss_pred CHHHHHHHHHHh---CCChhhEEEEeCCHHHHHHHHHCCC
Confidence 577889999999 9999999999999999999999997
No 233
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=96.42 E-value=0.0067 Score=63.54 Aligned_cols=50 Identities=16% Similarity=0.155 Sum_probs=40.2
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.++.+.....-+| ........+++| |+.|++|++|.|+.+.+...+++|.
T Consensus 131 ~~v~~~dv~~~KP----~Pd~yL~Aa~~L---gv~P~~CvviEDs~~Gi~Aa~aAGm 180 (221)
T COG0637 131 VIVTADDVARGKP----APDIYLLAAERL---GVDPEECVVVEDSPAGIQAAKAAGM 180 (221)
T ss_pred hhccHHHHhcCCC----CCHHHHHHHHHc---CCChHHeEEEecchhHHHHHHHCCC
Confidence 3445545545566 567777788888 9999999999999999999999997
No 234
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=96.37 E-value=0.011 Score=57.69 Aligned_cols=60 Identities=23% Similarity=0.295 Sum_probs=53.0
Q ss_pred HHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 586 YRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 586 y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
.++..+|-|++|+|.||++. .+...++++++-+.++ ++.|+.++|+|..+..-+..+...
T Consensus 23 L~~~Gikgvi~DlDNTLv~w--d~~~~tpe~~~W~~e~-k~~gi~v~vvSNn~e~RV~~~~~~ 82 (175)
T COG2179 23 LKAHGIKGVILDLDNTLVPW--DNPDATPELRAWLAEL-KEAGIKVVVVSNNKESRVARAAEK 82 (175)
T ss_pred HHHcCCcEEEEeccCceecc--cCCCCCHHHHHHHHHH-HhcCCEEEEEeCCCHHHHHhhhhh
Confidence 35667999999999999996 5677899999999999 899999999999999999888743
No 235
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=96.31 E-value=0.0013 Score=59.98 Aligned_cols=56 Identities=23% Similarity=0.417 Sum_probs=40.2
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002979 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
|+||+||||.. ...+-|...++|+.| ++.|.+++++|..+...-..+...+..+|+
T Consensus 1 ~l~D~dGvl~~----g~~~ipga~e~l~~L-~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi 56 (101)
T PF13344_consen 1 FLFDLDGVLYN----GNEPIPGAVEALDAL-RERGKPVVFLTNNSSRSREEYAKKLKKLGI 56 (101)
T ss_dssp EEEESTTTSEE----TTEE-TTHHHHHHHH-HHTTSEEEEEES-SSS-HHHHHHHHHHTTT
T ss_pred CEEeCccEeEe----CCCcCcCHHHHHHHH-HHcCCCEEEEeCCCCCCHHHHHHHHHhcCc
Confidence 68999999998 455678889999999 788999999997665554444443344443
No 236
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=96.29 E-value=0.017 Score=71.26 Aligned_cols=64 Identities=5% Similarity=0.092 Sum_probs=51.5
Q ss_pred HHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 584 SAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 584 ~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+.+.....+.+++=+||+++..-.-..++-+...++|++| ++.|+.++++||.+...+..+.+.
T Consensus 541 ~~~~~~g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L-~~~gi~~~llTGd~~~~a~~ia~~ 604 (741)
T PRK11033 541 NELESAGKTVVLVLRNDDVLGLIALQDTLRADARQAISEL-KALGIKGVMLTGDNPRAAAAIAGE 604 (741)
T ss_pred HHHHhCCCEEEEEEECCEEEEEEEEecCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH
Confidence 4556666788888889987752113456789999999999 789999999999999999999854
No 237
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=96.27 E-value=0.0046 Score=62.58 Aligned_cols=37 Identities=16% Similarity=0.149 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |++++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~~~~~l~vgD~~~di~aA~~~G~ 179 (184)
T TIGR01993 143 SPQAYEKALREA---GVDPERAIFFDDSARNIAAAKALGM 179 (184)
T ss_pred CHHHHHHHHHHh---CCCccceEEEeCCHHHHHHHHHcCC
Confidence 677889999999 9999999999999999999999986
No 238
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=96.23 E-value=0.011 Score=60.94 Aligned_cols=55 Identities=18% Similarity=0.181 Sum_probs=39.3
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
.+.+..+++++........+-+.+.++|+.| ++.|+.++++||-+...+..+...
T Consensus 109 ~~~~~~~~~~~~~~~~~d~~~~~~~~~l~~L-~~~Gi~~~i~TGD~~~~a~~~~~~ 163 (215)
T PF00702_consen 109 VIVLAVNLIFLGLFGLRDPLRPGAKEALQEL-KEAGIKVAILTGDNESTASAIAKQ 163 (215)
T ss_dssp CEEEEESHEEEEEEEEEEEBHTTHHHHHHHH-HHTTEEEEEEESSEHHHHHHHHHH
T ss_pred ccceeecCeEEEEEeecCcchhhhhhhhhhh-hccCcceeeeeccccccccccccc
Confidence 3444446555541111234567899999999 788999999999999999988854
No 239
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=96.20 E-value=0.3 Score=54.21 Aligned_cols=48 Identities=19% Similarity=0.235 Sum_probs=36.8
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCC----CCeEEEEC---CCChhhHHHH
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDP----NNTVFIVS---GRGRSSLSEW 645 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~----g~~v~I~T---GR~~~~l~~~ 645 (861)
.++||+||||.. ...+-+...++|+.| +.. |..++++| |++.....+.
T Consensus 2 ~~ifD~DGvL~~----g~~~i~ga~eal~~L-~~~~~~~g~~~~flTNn~g~s~~~~~~~ 56 (321)
T TIGR01456 2 GFAFDIDGVLFR----GKKPIAGASDALRRL-NRNQGQLKIPYIFLTNGGGFSERARAEE 56 (321)
T ss_pred EEEEeCcCceEC----CccccHHHHHHHHHH-hccccccCCCEEEEecCCCCCHHHHHHH
Confidence 589999999998 344588999999999 566 88888877 4556654443
No 240
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=96.02 E-value=0.024 Score=71.67 Aligned_cols=40 Identities=15% Similarity=0.369 Sum_probs=35.1
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 608 IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 608 ~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
...++-+.+.++++++ ++.|++++++||.+...+..+.+.
T Consensus 534 ~~Dplr~~v~e~I~~l-~~aGI~v~miTGD~~~tA~~ia~~ 573 (917)
T TIGR01116 534 MLDPPRPEVADAIEKC-RTAGIRVIMITGDNKETAEAICRR 573 (917)
T ss_pred eeCCCchhHHHHHHHH-HHCCCEEEEecCCCHHHHHHHHHH
Confidence 3456789999999998 899999999999999999988854
No 241
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=95.88 E-value=0.015 Score=49.65 Aligned_cols=60 Identities=23% Similarity=0.314 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCC--------CcccceecCC
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRK--------PSKAKYYLDD 828 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~--------~s~Aky~l~d 828 (861)
....++.+++.+ +++++++++|||+ .+|+.+-+.+|.. ++.|..|.. ...++|++++
T Consensus 6 ~p~~~~~a~~~~---~~~~~~~~~VGD~~~~Di~~a~~~G~~-----------~ilV~tG~~~~~~~~~~~~~pd~vv~~ 71 (75)
T PF13242_consen 6 SPGMLEQALKRL---GVDPSRCVMVGDSLETDIEAAKAAGID-----------TILVLTGVYSPEDLEKAEHKPDYVVDD 71 (75)
T ss_dssp SHHHHHHHHHHH---TSGGGGEEEEESSTTTHHHHHHHTTSE-----------EEEESSSSSCCCGHHHSSSTTSEEESS
T ss_pred cHHHHHHHHHHc---CCCHHHEEEEcCCcHhHHHHHHHcCCc-----------EEEECCCCCCHHHHhccCCCCCEEECC
Confidence 456788888998 9999999999999 9999999999973 345555542 2477788887
Q ss_pred HhH
Q 002979 829 ATD 831 (861)
Q Consensus 829 ~~e 831 (861)
..|
T Consensus 72 l~e 74 (75)
T PF13242_consen 72 LKE 74 (75)
T ss_dssp GGG
T ss_pred HHh
Confidence 765
No 242
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=95.82 E-value=0.098 Score=52.57 Aligned_cols=38 Identities=18% Similarity=-0.000 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
|.-.+..+++++ ++++...++|||..+|+....++|..
T Consensus 107 ~~gm~~~~~~~~---~iD~~~s~~VGD~~~Dlq~a~n~gi~ 144 (181)
T COG0241 107 KPGMLLSALKEY---NIDLSRSYVVGDRLTDLQAAENAGIK 144 (181)
T ss_pred ChHHHHHHHHHh---CCCccceEEecCcHHHHHHHHHCCCC
Confidence 566778888888 89999999999999999999999874
No 243
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=95.78 E-value=0.034 Score=65.22 Aligned_cols=49 Identities=24% Similarity=0.306 Sum_probs=38.1
Q ss_pred ccceEEEecCCccccCCCCCC---------CCCCHHHHHHHHHhhcCCCCeEEEECCCC
Q 002979 589 TERRAIFLDYDGTVVPETSII---------KSPGPEVISVLKTLCSDPNNTVFIVSGRG 638 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~---------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~ 638 (861)
...|+++||+||||+...+.. ..+.+.+.++|++| .+.|..++|+|..+
T Consensus 166 ~~~Kia~fD~DGTLi~t~sg~~~~~~~~d~~~l~pgV~e~L~~L-~~~Gy~IvIvTNQ~ 223 (526)
T TIGR01663 166 GQEKIAGFDLDGTIIKTKSGKVFPKGPDDWQIIFPEIPEKLKEL-EADGFKICIFTNQG 223 (526)
T ss_pred ccCcEEEEECCCCccccCCCccCCCCHHHeeecccCHHHHHHHH-HHCCCEEEEEECCc
Confidence 346899999999999743211 12467889999999 79999999999743
No 244
>KOG1615 consensus Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=95.71 E-value=0.0026 Score=63.11 Aligned_cols=71 Identities=15% Similarity=0.097 Sum_probs=47.0
Q ss_pred EEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CCCcccceecC
Q 002979 749 VEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RKPSKAKYYLD 827 (861)
Q Consensus 749 vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~~s~Aky~l~ 827 (861)
-+-+..+-.|+.+++.+.+ +.+...++++||+.||++|..-+...++-+ ++.+- .-+..|+|+++
T Consensus 151 ~~ptsdsggKa~~i~~lrk-----~~~~~~~~mvGDGatDlea~~pa~afi~~~---------g~~~r~~vk~nak~~~~ 216 (227)
T KOG1615|consen 151 NEPTSDSGGKAEVIALLRK-----NYNYKTIVMVGDGATDLEAMPPADAFIGFG---------GNVIREGVKANAKWYVT 216 (227)
T ss_pred CCccccCCccHHHHHHHHh-----CCChheeEEecCCccccccCCchhhhhccC---------CceEcHhhHhccHHHHH
Confidence 3445556689999999887 668889999999999999887644321100 11111 12577888877
Q ss_pred CHhHHH
Q 002979 828 DATDVL 833 (861)
Q Consensus 828 d~~eV~ 833 (861)
+...+.
T Consensus 217 ~f~~L~ 222 (227)
T KOG1615|consen 217 DFYVLG 222 (227)
T ss_pred HHHHHc
Confidence 665543
No 245
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=95.68 E-value=0.11 Score=66.40 Aligned_cols=43 Identities=19% Similarity=0.248 Sum_probs=36.7
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceE
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIA 655 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgli 655 (861)
..++-+++.++++++ ++.|+.|+++|||+...+..+.+. +|++
T Consensus 566 ~Dplr~~v~~aI~~l-~~~Gi~v~~~TGd~~~ta~~ia~~---~gi~ 608 (997)
T TIGR01106 566 IDPPRAAVPDAVGKC-RSAGIKVIMVTGDHPITAKAIAKG---VGII 608 (997)
T ss_pred cCCChHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCC
Confidence 445778999999998 899999999999999999999854 4554
No 246
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=95.67 E-value=0.05 Score=65.83 Aligned_cols=67 Identities=10% Similarity=0.120 Sum_probs=51.7
Q ss_pred HHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 582 IVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 582 ~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..+.+.+...+.+++-.|++++..-.-...+-+++.+++++| ++.|++++++||=.......+.+++
T Consensus 416 ~~~~~a~~G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~L-r~~GI~vvMiTGDn~~TA~aIA~el 482 (679)
T PRK01122 416 AVDEVARKGGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAEL-RKMGIKTVMITGDNPLTAAAIAAEA 482 (679)
T ss_pred HHHHHHhCCCcEEEEEECCeEEEEEEEeccCchhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 334555556677877788887752223456789999999998 8999999999999999999998543
No 247
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=95.60 E-value=0.02 Score=53.34 Aligned_cols=54 Identities=22% Similarity=0.326 Sum_probs=43.4
Q ss_pred CCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC--CC----cccceecCCHhHHHHHHHHH
Q 002979 773 GRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR--KP----SKAKYYLDDATDVLKLLQGL 839 (861)
Q Consensus 773 gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~----s~Aky~l~d~~eV~~~L~~L 839 (861)
+.+.+.|+++||+.||+.|++.+..+ -|++++ .+ ..|++++.+..++++++...
T Consensus 90 kk~~~k~vmVGnGaND~laLr~ADlG-------------I~tiq~e~v~~r~l~~ADvvik~i~e~ldl~~~~ 149 (152)
T COG4087 90 KKRYEKVVMVGNGANDILALREADLG-------------ICTIQQEGVPERLLLTADVVLKEIAEILDLLKDT 149 (152)
T ss_pred cCCCcEEEEecCCcchHHHhhhcccc-------------eEEeccCCcchHHHhhchhhhhhHHHHHHHhhcc
Confidence 55678999999999999999999875 356664 33 56888999999998887654
No 248
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=95.58 E-value=0.06 Score=65.12 Aligned_cols=70 Identities=9% Similarity=0.131 Sum_probs=50.7
Q ss_pred HHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 579 IDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 579 ~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
.+...+.+.+...+.++.-.|++++..-.-...+-++..+++++| ++.|+.++++||-+......+.+++
T Consensus 409 ~~~~~~~~a~~G~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~L-r~~GI~vvMiTGDn~~TA~aIA~el 478 (673)
T PRK14010 409 LDALVKGVSKKGGTPLVVLEDNEILGVIYLKDVIKDGLVERFREL-REMGIETVMCTGDNELTAATIAKEA 478 (673)
T ss_pred HHHHHHHHHhCCCeEEEEEECCEEEEEEEeecCCcHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHHc
Confidence 344445555555565554447776642113456789999999998 8999999999999999999998543
No 249
>KOG0210 consensus P-type ATPase [Inorganic ion transport and metabolism]
Probab=95.56 E-value=0.098 Score=61.07 Aligned_cols=175 Identities=17% Similarity=0.187 Sum_probs=92.9
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHH
Q 002979 610 KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVM 689 (861)
Q Consensus 610 ~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~ 689 (861)
.++-+.++-.|+-| ++.|++|+..||-..+.+.-+.. .-+++.-+- .|.. .... .. +..+..-+
T Consensus 657 DkLQ~dVk~tLElL-RNAgikiWMLTGDKlETA~ciAk---Ss~L~sR~q-~ihv-----~~~v-~s-----r~dah~eL 720 (1051)
T KOG0210|consen 657 DKLQDDVKPTLELL-RNAGIKIWMLTGDKLETAICIAK---SSRLFSRGQ-YIHV-----IRSV-TS-----RGDAHNEL 720 (1051)
T ss_pred HHHhhhhHhHHHHH-hhcCcEEEEEcCcchhheeeeeh---hccceecCc-eEEE-----EEec-CC-----chHHHHHH
Confidence 34566777888888 89999999999988777654442 223332111 1110 0000 00 12222233
Q ss_pred HHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHh
Q 002979 690 RSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRM 769 (861)
Q Consensus 690 ~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l 769 (861)
+.+....+...+- .+.++. ...+-..+++.+.....+.++.. -..|. -|+..++.+-++-
T Consensus 721 ~~lR~k~~~aLvi-~G~Sl~------------~cl~yye~Ef~el~~~~~aVv~C-----RctPt--QKA~v~~llq~~t 780 (1051)
T KOG0210|consen 721 NNLRRKTDCALVI-DGESLE------------FCLKYYEDEFIELVCELPAVVCC-----RCTPT--QKAQVVRLLQKKT 780 (1051)
T ss_pred HHhhcCCCcEEEE-cCchHH------------HHHHHHHHHHHHHHHhcCcEEEE-----ecChh--HHHHHHHHHHHhh
Confidence 3333222211111 111111 11122223333322233322221 23343 3888777766654
Q ss_pred hcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC----CCcccceecCCHhHHHHHHHHH
Q 002979 770 FNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR----KPSKAKYYLDDATDVLKLLQGL 839 (861)
Q Consensus 770 ~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~----~~s~Aky~l~d~~eV~~~L~~L 839 (861)
| ..+.||||+.||..|.+.|+.+ +|+ +|+ +.-+|+|-+.....|-++|-.-
T Consensus 781 ---~---krvc~IGDGGNDVsMIq~A~~G------------iGI-~gkEGkQASLAADfSItqF~Hv~rLLl~H 835 (1051)
T KOG0210|consen 781 ---G---KRVCAIGDGGNDVSMIQAADVG------------IGI-VGKEGKQASLAADFSITQFSHVSRLLLWH 835 (1051)
T ss_pred ---C---ceEEEEcCCCccchheeecccc------------eee-ecccccccchhccccHHHHHHHHHHhhcc
Confidence 3 6799999999999999999875 233 343 3567888887777777776543
No 250
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=95.50 E-value=0.091 Score=66.78 Aligned_cols=138 Identities=16% Similarity=0.223 Sum_probs=88.9
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|++++++||-....+..+.+. +|+...++..+. |. +
T Consensus 577 ~Dplr~~~~~aI~~l-~~aGI~v~miTGD~~~tA~~iA~~---~GI~~~~~~vi~--G~----------~---------- 630 (941)
T TIGR01517 577 KDPLRPGVREAVQEC-QRAGITVRMVTGDNIDTAKAIARN---CGILTFGGLAME--GK----------E---------- 630 (941)
T ss_pred cCCCchhHHHHHHHH-HHCCCEEEEECCCChHHHHHHHHH---cCCCCCCceEee--HH----------H----------
Confidence 446778999999998 899999999999999999999854 455433221110 00 0
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002979 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.. ..++ +.+.+.+. .-+-.+.|. .|...++.+.++
T Consensus 631 ~~~l------------------------------~~~e----l~~~i~~~-------~Vfar~sPe--~K~~iV~~lq~~ 667 (941)
T TIGR01517 631 FRRL------------------------------VYEE----MDPILPKL-------RVLARSSPL--DKQLLVLMLKDM 667 (941)
T ss_pred hhhC------------------------------CHHH----HHHHhccC-------eEEEECCHH--HHHHHHHHHHHC
Confidence 0000 0011 12122211 122345565 488888887542
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeC-CC----CcccceecC--CHhHHHHHH
Q 002979 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVG-RK----PSKAKYYLD--DATDVLKLL 836 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG-~~----~s~Aky~l~--d~~eV~~~L 836 (861)
| .-|.++||+.||.+|++.|+. |+++| .+ +..|++++- +...+.+++
T Consensus 668 ----g---~vVam~GDGvNDapALk~AdV--------------GIAmg~~gtdvAk~aADivL~dd~f~~I~~~i 721 (941)
T TIGR01517 668 ----G---EVVAVTGDGTNDAPALKLADV--------------GFSMGISGTEVAKEASDIILLDDNFASIVRAV 721 (941)
T ss_pred ----C---CEEEEECCCCchHHHHHhCCc--------------ceecCCCccHHHHHhCCEEEecCCHHHHHHHH
Confidence 3 369999999999999999986 67888 43 467788774 566666655
No 251
>PTZ00445 p36-lilke protein; Provisional
Probab=95.48 E-value=0.022 Score=58.08 Aligned_cols=158 Identities=19% Similarity=0.204 Sum_probs=96.3
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCCC---CCCC---------CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHH
Q 002979 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS---IIKS---------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~~---~~~~---------~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~ 645 (861)
..+.++..+++..+|+|++|+|-||+...+ .+.. ++++.+..+++| ++.|+.|+|+|=-+...+
T Consensus 30 ~~~~~v~~L~~~GIk~Va~D~DnTlI~~HsgG~~~~~~~~~~~~~~~tpefk~~~~~l-~~~~I~v~VVTfSd~~~~--- 105 (219)
T PTZ00445 30 SADKFVDLLNECGIKVIASDFDLTMITKHSGGYIDPDNDDIRVLTSVTPDFKILGKRL-KNSNIKISVVTFSDKELI--- 105 (219)
T ss_pred HHHHHHHHHHHcCCeEEEecchhhhhhhhcccccCCCcchhhhhccCCHHHHHHHHHH-HHCCCeEEEEEccchhhc---
Confidence 356678888999999999999999998222 1222 689999999998 799999999995443331
Q ss_pred hccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHH
Q 002979 646 LAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAK 725 (861)
Q Consensus 646 ~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~ 725 (861)
+. ..++-+|. | .+.++..++.-.. ..-++. ++.|. |.+ |+..
T Consensus 106 ----~~----~~~~~~Is--g---------------~~li~~~lk~s~~---~~~i~~-----~~~yy---p~~--w~~p 147 (219)
T PTZ00445 106 ----PS----ENRPRYIS--G---------------DRMVEAALKKSKC---DFKIKK-----VYAYY---PKF--WQEP 147 (219)
T ss_pred ----cc----cCCcceec--h---------------HHHHHHHHHhcCc---cceeee-----eeeeC---Ccc--cCCh
Confidence 10 01111110 1 1222222221100 001110 11111 111 1111
Q ss_pred HHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 726 ELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 726 el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
.....+ --++|....|..=+++++++. |+.+++++.|=|+....+..+.+|.
T Consensus 148 ~~y~~~-----------------gl~KPdp~iK~yHle~ll~~~---gl~peE~LFIDD~~~NVeaA~~lGi 199 (219)
T PTZ00445 148 SDYRPL-----------------GLDAPMPLDKSYHLKQVCSDF---NVNPDEILFIDDDMNNCKNALKEGY 199 (219)
T ss_pred hhhhhh-----------------cccCCCccchHHHHHHHHHHc---CCCHHHeEeecCCHHHHHHHHHCCC
Confidence 111111 134566667888889999999 9999999999999999999999987
No 252
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=95.43 E-value=0.19 Score=64.61 Aligned_cols=46 Identities=15% Similarity=0.199 Sum_probs=38.1
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecC
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaen 658 (861)
..++-+++.++++++ ++.|+.++++||.+...+..+.+ ..|++..+
T Consensus 654 ~d~lr~~~~~~I~~l-~~agi~v~miTGD~~~TA~~iA~---~~gii~~~ 699 (1054)
T TIGR01657 654 ENPLKPDTKEVIKEL-KRASIRTVMITGDNPLTAVHVAR---ECGIVNPS 699 (1054)
T ss_pred ecCCCccHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHH---HcCCCCCC
Confidence 345778999999998 89999999999999999999885 45565444
No 253
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=95.37 E-value=0.03 Score=56.59 Aligned_cols=34 Identities=24% Similarity=0.398 Sum_probs=29.1
Q ss_pred HHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 614 PEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 614 ~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+++.+.|+.+ ++.|..++|+||-....++.++..
T Consensus 92 ~~~~e~i~~~-~~~~~~v~IvS~~~~~~i~~~~~~ 125 (192)
T PF12710_consen 92 PDAMELIREL-KDNGIKVVIVSGSPDEIIEPIAER 125 (192)
T ss_dssp TTHHHHHHHH-HHTTSEEEEEEEEEHHHHHHHHHH
T ss_pred hhHHHHHHHH-HHCCCEEEEECCCcHHHHHHHHHH
Confidence 5777899887 788999999999999888888753
No 254
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=95.32 E-value=0.078 Score=68.27 Aligned_cols=185 Identities=15% Similarity=0.124 Sum_probs=95.3
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChH-HHHHHHH
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLE-WKKIVEP 687 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~-w~~~v~~ 687 (861)
..++-+.+.++++.| ++.|++++++||=....+..+... .+++..+.-.+...+... .+.. ..+.+..
T Consensus 629 eD~lq~~v~etI~~L-~~AGIkv~mlTGD~~~TA~~IA~~---~~ii~~~~~~~~i~~~~~-------~~~~~~~~~i~~ 697 (1057)
T TIGR01652 629 EDKLQEGVPETIELL-RQAGIKIWVLTGDKVETAINIGYS---CRLLSRNMEQIVITSESL-------DATRSVEAAIKF 697 (1057)
T ss_pred hhhhhhccHHHHHHH-HHCCCeEEEEcCCcHHHHHHHHHH---hCCCCCCCeEEEEecCch-------hhhHHHHHHHHH
Confidence 445678888999998 899999999999999999988754 344443332222222110 0000 0011111
Q ss_pred HHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHH
Q 002979 688 VMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLV 767 (861)
Q Consensus 688 i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~ 767 (861)
.......... ..-..+...+...- ..+......++.+++.+.+......+ +..+.|. .|+..++.+-+
T Consensus 698 ~~~~~~~~~~-~~~~~~~~~lvi~G----~~l~~~l~~~~~~~f~~l~~~~~~vV-----~aR~sP~--qK~~IV~~lk~ 765 (1057)
T TIGR01652 698 GLEGTSEEFN-NLGDSGNVALVIDG----KSLGYALDEELEKEFLQLALKCKAVI-----CCRVSPS--QKADVVRLVKK 765 (1057)
T ss_pred HHHHHHHhhh-hhccCCceEEEEcc----HHHHHHHhhHHHHHHHHHHhhCCEEE-----EeCCCHH--HHHHHHHHHHh
Confidence 1100000000 00001111111110 00000000112223333332222111 1234454 49998888765
Q ss_pred HhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEe-CC----CCcccceecCCHhHHHHHH
Q 002979 768 RMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTV-GR----KPSKAKYYLDDATDVLKLL 836 (861)
Q Consensus 768 ~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~v-G~----~~s~Aky~l~d~~eV~~~L 836 (861)
.. ..-|+++||+.||.+|++.|+.+ |.+ |. +...|+|.+.+...+.++|
T Consensus 766 ~~------~~~vl~iGDG~ND~~mlk~AdVG--------------Igi~g~eg~qA~~aaD~~i~~F~~L~~ll 819 (1057)
T TIGR01652 766 ST------GKTTLAIGDGANDVSMIQEADVG--------------VGISGKEGMQAVMASDFAIGQFRFLTKLL 819 (1057)
T ss_pred cC------CCeEEEEeCCCccHHHHhhcCee--------------eEecChHHHHHHHhhhhhhhhHHHHHHHH
Confidence 42 24799999999999999999864 443 32 3467888888766666665
No 255
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=95.27 E-value=0.031 Score=58.42 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=43.5
Q ss_pred cceEEEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh---HH
Q 002979 590 ERRAIFLDYDGTVVPETS-----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS---LS 643 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~---l~ 643 (861)
.+-+++||+|.|+++..+ ...+.-+.++++++.+ ++.|+.|+++|||+... ..
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l-~~~G~~Vf~lTGR~e~~r~~T~ 154 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKI-IELGIKIFLLSGRWEELRNATL 154 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHH-HHCCCEEEEEcCCChHHHHHHH
Confidence 456899999999997221 1234568899999998 79999999999999765 44
Q ss_pred HHh
Q 002979 644 EWL 646 (861)
Q Consensus 644 ~~~ 646 (861)
+++
T Consensus 155 ~nL 157 (229)
T TIGR01675 155 DNL 157 (229)
T ss_pred HHH
Confidence 454
No 256
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=94.98 E-value=0.21 Score=61.90 Aligned_cols=167 Identities=19% Similarity=0.230 Sum_probs=100.5
Q ss_pred HHHHhccceEEEecC---Cc--cccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecC
Q 002979 584 SAYRKTERRAIFLDY---DG--TVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEH 658 (861)
Q Consensus 584 ~~y~~s~~klI~~Dl---DG--TLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaen 658 (861)
+.+.....|.+.+=+ ++ +++..-.-..++-+++.++++++ ++.|+.++++||-+......+.++ +|+.. +
T Consensus 410 ~~~~~~G~rvl~vA~~~~e~~l~~~Gli~l~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~~-~ 484 (755)
T TIGR01647 410 DELASRGYRALGVARTDEEGRWHFLGLLPLFDPPRHDTKETIERA-RHLGVEVKMVTGDHLAIAKETARR---LGLGT-N 484 (755)
T ss_pred HHHHhCCCEEEEEEEEcCCCCcEEEEEeeccCCChhhHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCCC-C
Confidence 344445567777654 33 44432223556789999999998 899999999999999999999864 44421 0
Q ss_pred cEEEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCC
Q 002979 659 GYFIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANE 738 (861)
Q Consensus 659 G~~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~ 738 (861)
+. .+. .+. .|.. ... ...+++.+.+ .+.
T Consensus 485 ---~~-~~~-------------------~l~-------~~~~-----------~~~-------~~~~~~~~~~----~~~ 512 (755)
T TIGR01647 485 ---IY-TAD-------------------VLL-------KGDN-----------RDD-------LPSGELGEMV----EDA 512 (755)
T ss_pred ---Cc-CHH-------------------Hhc-------CCcc-----------hhh-------CCHHHHHHHH----HhC
Confidence 00 000 000 0000 000 0011222222 221
Q ss_pred CEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC
Q 002979 739 PAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK 818 (861)
Q Consensus 739 ~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (861)
.-+-++.|.. |...++.+-++ | .-|.++||+.||.+.++.|+. ++++|++
T Consensus 513 -------~vfAr~~Pe~--K~~iV~~lq~~----G---~~VamvGDGvNDapAL~~AdV--------------GIAm~~g 562 (755)
T TIGR01647 513 -------DGFAEVFPEH--KYEIVEILQKR----G---HLVGMTGDGVNDAPALKKADV--------------GIAVAGA 562 (755)
T ss_pred -------CEEEecCHHH--HHHHHHHHHhc----C---CEEEEEcCCcccHHHHHhCCe--------------eEEecCC
Confidence 1234566654 88888876442 3 469999999999999999985 6778764
Q ss_pred ----Ccccceec--CCHhHHHHHHH
Q 002979 819 ----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 ----~s~Aky~l--~d~~eV~~~L~ 837 (861)
+..|+.++ ++...+.+.++
T Consensus 563 tdvAkeaADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 563 TDAARSAADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred cHHHHHhCCEEEEcCChHHHHHHHH
Confidence 46677766 34555555544
No 257
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=94.82 E-value=0.22 Score=62.86 Aligned_cols=137 Identities=18% Similarity=0.224 Sum_probs=87.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|+.++++||=+......+.++ +|+. ++ .. ....+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~~IA~~---lGI~--~~--------~v----~~G~e---------- 599 (902)
T PRK10517 548 LDPPKETTAPALKAL-KASGVTVKILTGDSELVAAKVCHE---VGLD--AG--------EV----LIGSD---------- 599 (902)
T ss_pred hCcchhhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCC--cc--------Cc----eeHHH----------
Confidence 445778999999998 899999999999999999999854 4441 11 00 00000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002979 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.+ + .+++.+.+ .+. .-+-.+.|.. |...++.+-++
T Consensus 600 l~~l-----------------------~-------~~el~~~~----~~~-------~VfAr~sPe~--K~~IV~~Lq~~ 636 (902)
T PRK10517 600 IETL-----------------------S-------DDELANLA----ERT-------TLFARLTPMH--KERIVTLLKRE 636 (902)
T ss_pred HHhC-----------------------C-------HHHHHHHH----hhC-------cEEEEcCHHH--HHHHHHHHHHC
Confidence 0000 0 01222222 111 1233555654 88888876542
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHH
Q 002979 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
| .-|.++||+.||.++++.|+. +++||++ +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVam~GDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 637 ----G---HVVGFMGDGINDAPALRAADI--------------GISVDGAVDIAREAADIILLEKSLMVLEEGVI 690 (902)
T ss_pred ----C---CEEEEECCCcchHHHHHhCCE--------------EEEeCCcCHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 569999999999999999985 7888864 46777776 34555555443
No 258
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.80 E-value=0.15 Score=61.94 Aligned_cols=140 Identities=19% Similarity=0.298 Sum_probs=98.7
Q ss_pred HHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcE
Q 002979 581 HIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGY 660 (861)
Q Consensus 581 ~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~ 660 (861)
.-...+.....-++++-.||.+...-.-..++-++..+++++| ++.|+.+++.||=+....+.+.+++ |+.
T Consensus 507 ~~~~~~~~~G~t~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L-~~~Gi~~~mLTGDn~~~A~~iA~~l---GId----- 577 (713)
T COG2217 507 ERIEALESEGKTVVFVAVDGKLVGVIALADELRPDAKEAIAAL-KALGIKVVMLTGDNRRTAEAIAKEL---GID----- 577 (713)
T ss_pred hhHHHHHhcCCeEEEEEECCEEEEEEEEeCCCChhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc---ChH-----
Confidence 3344555545558999999977651112446778999999999 8999999999999999998887432 320
Q ss_pred EEEeCCcceEEecCCccChHHHHHHHHHHHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCE
Q 002979 661 FIRWNKTSEWETNHLGADLEWKKIVEPVMRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPA 740 (861)
Q Consensus 661 ~i~~~~~~~~~~~~~~~~~~w~~~v~~i~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~ 740 (861)
+.+
T Consensus 578 -----------------------------~v~------------------------------------------------ 580 (713)
T COG2217 578 -----------------------------EVR------------------------------------------------ 580 (713)
T ss_pred -----------------------------hhe------------------------------------------------
Confidence 000
Q ss_pred EEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC--
Q 002979 741 VVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK-- 818 (861)
Q Consensus 741 ~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~-- 818 (861)
-|+.|.+ |...++++-++ | ..|+++||+.||-+.|..+.. ++++|..
T Consensus 581 --------AellPed--K~~~V~~l~~~----g---~~VamVGDGINDAPALA~AdV--------------GiAmG~GtD 629 (713)
T COG2217 581 --------AELLPED--KAEIVRELQAE----G---RKVAMVGDGINDAPALAAADV--------------GIAMGSGTD 629 (713)
T ss_pred --------ccCCcHH--HHHHHHHHHhc----C---CEEEEEeCCchhHHHHhhcCe--------------eEeecCCcH
Confidence 0222322 77777777543 3 579999999999999999985 7888874
Q ss_pred --Ccccceec--CCHhHHHHHHH
Q 002979 819 --PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 819 --~s~Aky~l--~d~~eV~~~L~ 837 (861)
...|+..+ +|...|.++++
T Consensus 630 vA~eaADvvL~~~dL~~v~~ai~ 652 (713)
T COG2217 630 VAIEAADVVLMRDDLSAVPEAID 652 (713)
T ss_pred HHHHhCCEEEecCCHHHHHHHHH
Confidence 46777776 56777777665
No 259
>PLN03190 aminophospholipid translocase; Provisional
Probab=94.78 E-value=0.26 Score=63.62 Aligned_cols=40 Identities=10% Similarity=0.111 Sum_probs=34.4
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..++-+.+.+++++| ++.|+.++++||-.......+...+
T Consensus 724 ~D~lr~~v~~~I~~l-~~agi~v~mlTGD~~~tAi~IA~s~ 763 (1178)
T PLN03190 724 EDKLQQGVPEAIESL-RTAGIKVWVLTGDKQETAISIGYSS 763 (1178)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHHh
Confidence 445788999999999 7999999999999999998887543
No 260
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=94.77 E-value=0.013 Score=58.06 Aligned_cols=43 Identities=30% Similarity=0.411 Sum_probs=32.0
Q ss_pred eEEEecCCccccCCCCCCC---------CCCHHHHHHHHHhhcCCCCeEEEEC
Q 002979 592 RAIFLDYDGTVVPETSIIK---------SPGPEVISVLKTLCSDPNNTVFIVS 635 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~---------~~s~~~~~~L~~L~~~~g~~v~I~T 635 (861)
|+.+||+||||+...+... -..+.+.++|++| .+.|..++|+|
T Consensus 1 Kia~fD~DgTLi~~~s~~~f~~~~~D~~~~~~~v~~~L~~l-~~~Gy~IvIvT 52 (159)
T PF08645_consen 1 KIAFFDLDGTLIKTKSGKKFPKDPDDWKFFPPGVPEALREL-HKKGYKIVIVT 52 (159)
T ss_dssp SEEEE-SCTTTEE-STSTTS-SSTCGGEEC-TTHHHHHHHH-HHTTEEEEEEE
T ss_pred CEEEEeCCCCccCCCCCCcCcCCHHHhhhcchhHHHHHHHH-HhcCCeEEEEe
Confidence 6899999999998554111 1345799999999 78999999998
No 261
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=94.75 E-value=0.25 Score=62.27 Aligned_cols=137 Identities=17% Similarity=0.193 Sum_probs=86.5
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|+.++++||-+......+.++ +|+.. + ... ...+
T Consensus 513 ~Dp~R~~~~~aI~~l-~~aGI~vvmiTGD~~~tA~aIA~~---lGI~~--~--------~v~----~g~~---------- 564 (867)
T TIGR01524 513 LDPPKESTKEAIAAL-FKNGINVKVLTGDNEIVTARICQE---VGIDA--N--------DFL----LGAD---------- 564 (867)
T ss_pred eCCCchhHHHHHHHH-HHCCCEEEEEcCCCHHHHHHHHHH---cCCCC--C--------Cee----ecHh----------
Confidence 345779999999998 899999999999999999998854 44421 0 000 0000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002979 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.. ..+++.+. +.+. .-+-.+.|.. |...++.+-++
T Consensus 565 l~~~------------------------------~~~el~~~----~~~~-------~vfAr~~Pe~--K~~iV~~lq~~ 601 (867)
T TIGR01524 565 IEEL------------------------------SDEELARE----LRKY-------HIFARLTPMQ--KSRIIGLLKKA 601 (867)
T ss_pred hhhC------------------------------CHHHHHHH----hhhC-------eEEEECCHHH--HHHHHHHHHhC
Confidence 0000 00122211 1111 1223455544 88888876442
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHH
Q 002979 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
| ..|.++||+.||.++++.|+. ++++|++ +..|+.++ ++...+.+.++
T Consensus 602 ----G---~vVam~GDGvNDapALk~AdV--------------GIAmg~gtdvAk~aADiVLldd~~~~I~~ai~ 655 (867)
T TIGR01524 602 ----G---HTVGFLGDGINDAPALRKADV--------------GISVDTAADIAKEASDIILLEKSLMVLEEGVI 655 (867)
T ss_pred ----C---CEEEEECCCcccHHHHHhCCE--------------EEEeCCccHHHHHhCCEEEecCChHHHHHHHH
Confidence 3 479999999999999999985 7888864 46677776 34555555444
No 262
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=94.62 E-value=0.04 Score=54.75 Aligned_cols=48 Identities=27% Similarity=0.413 Sum_probs=36.8
Q ss_pred cccccCCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002979 572 PSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (861)
Q Consensus 572 ~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L 623 (861)
++|..++.+.- .-++..+|.++||.|+||+.. ....++++..+.++++
T Consensus 24 ~si~~I~~~~~--~Lk~~Gik~li~DkDNTL~~~--~~~~i~~~~~~~~~~l 71 (168)
T PF09419_consen 24 PSIRDIDFEAN--HLKKKGIKALIFDKDNTLTPP--YEDEIPPEYAEWLNEL 71 (168)
T ss_pred CChhhCCcchh--hhhhcCceEEEEcCCCCCCCC--CcCcCCHHHHHHHHHH
Confidence 34555665441 135678999999999999974 5678899999999998
No 263
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=94.47 E-value=1.1 Score=47.99 Aligned_cols=58 Identities=14% Similarity=0.222 Sum_probs=42.1
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC
Q 002979 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK 818 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~ 818 (861)
+.-.|.+||.++..+++++ |..|+.|++|-|+...+.-++.+=.. .+-.++|+.....
T Consensus 156 lft~~~~KG~~L~~fL~~~---~~~pk~IIfIDD~~~nl~sv~~a~k~-------~~I~f~G~~Yt~~ 213 (252)
T PF11019_consen 156 LFTGGQDKGEVLKYFLDKI---NQSPKKIIFIDDNKENLKSVEKACKK-------SGIDFIGFHYTGA 213 (252)
T ss_pred EEeCCCccHHHHHHHHHHc---CCCCCeEEEEeCCHHHHHHHHHHHhh-------CCCcEEEEEEcch
Confidence 3445788999999999999 99999999999997665544433221 2234678877654
No 264
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=94.46 E-value=0.37 Score=60.89 Aligned_cols=137 Identities=15% Similarity=0.215 Sum_probs=88.2
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|+.++++||=+......+.++ +|+. .+.. ....+
T Consensus 548 ~Dp~R~~a~~aI~~l-~~aGI~v~miTGD~~~tA~aIA~~---lGI~--~~~v------------i~G~e---------- 599 (903)
T PRK15122 548 LDPPKESAAPAIAAL-RENGVAVKVLTGDNPIVTAKICRE---VGLE--PGEP------------LLGTE---------- 599 (903)
T ss_pred cCccHHHHHHHHHHH-HHCCCeEEEECCCCHHHHHHHHHH---cCCC--CCCc------------cchHh----------
Confidence 446779999999998 899999999999999999999854 4442 1100 00000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002979 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
++.+ + .+++.+.+ .+. .-+-.+.|.. |...++.+-++
T Consensus 600 l~~~-----------------------~-------~~el~~~v----~~~-------~VfAr~sPe~--K~~iV~~Lq~~ 636 (903)
T PRK15122 600 IEAM-----------------------D-------DAALAREV----EER-------TVFAKLTPLQ--KSRVLKALQAN 636 (903)
T ss_pred hhhC-----------------------C-------HHHHHHHh----hhC-------CEEEEeCHHH--HHHHHHHHHhC
Confidence 0000 0 01222222 211 1234566654 88888877542
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCC----Ccccceec--CCHhHHHHHHH
Q 002979 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRK----PSKAKYYL--DDATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~----~s~Aky~l--~d~~eV~~~L~ 837 (861)
| .-|.++||+.||.++++.|+. +++||++ +..|+.++ ++...+.+.++
T Consensus 637 ----G---~vVamtGDGvNDaPALk~ADV--------------GIAmg~gtdvAkeaADiVLldd~f~~Iv~ai~ 690 (903)
T PRK15122 637 ----G---HTVGFLGDGINDAPALRDADV--------------GISVDSGADIAKESADIILLEKSLMVLEEGVI 690 (903)
T ss_pred ----C---CEEEEECCCchhHHHHHhCCE--------------EEEeCcccHHHHHhcCEEEecCChHHHHHHHH
Confidence 3 469999999999999999985 7888864 56777776 45555555544
No 265
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=94.44 E-value=2.1 Score=48.44 Aligned_cols=252 Identities=17% Similarity=0.215 Sum_probs=131.8
Q ss_pred HcCCCCCEEEEeCccc--ccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHH
Q 002979 194 VINPDDDCVWVHDYHL--MVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 194 ~~~p~~D~VwvhDyhl--~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~ 271 (861)
..+| |+|..=||-= +-+...+|++.++.|+.+|.- |.+|.==++|-..++.. +|.+- -.+.+-..|..
T Consensus 80 ~~~p--d~vIlID~pgFNlrlak~lk~~~~~~~viyYI~-----PqvWAWr~~R~~~i~~~--~D~ll-~ifPFE~~~y~ 149 (373)
T PF02684_consen 80 EEKP--DVVILIDYPGFNLRLAKKLKKRGIPIKVIYYIS-----PQVWAWRPGRAKKIKKY--VDHLL-VIFPFEPEFYK 149 (373)
T ss_pred HcCC--CEEEEeCCCCccHHHHHHHHHhCCCceEEEEEC-----CceeeeCccHHHHHHHH--Hhhee-ECCcccHHHHh
Confidence 3467 7888778863 457889999998888877762 44443334555555443 33321 11222223332
Q ss_pred HHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc--CCCeE--EEeecCcccc-
Q 002979 272 CCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF--DGKKL--ILGIDDMDIF- 346 (861)
Q Consensus 272 ~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~--~~~~v--il~Vdrld~~- 346 (861)
+.| +-..|-|+.. +|. ....+.. ...++.+ .++++ +|-=+|-...
T Consensus 150 ------------~~g-~~~~~VGHPl--------~d~-----~~~~~~~----~~~~~~~l~~~~~iIaLLPGSR~~EI~ 199 (373)
T PF02684_consen 150 ------------KHG-VPVTYVGHPL--------LDE-----VKPEPDR----AEAREKLLDPDKPIIALLPGSRKSEIK 199 (373)
T ss_pred ------------ccC-CCeEEECCcc--------hhh-----hccCCCH----HHHHHhcCCCCCcEEEEeCCCCHHHHH
Confidence 111 1244555532 111 1111111 1122222 33433 3445676544
Q ss_pred cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHH
Q 002979 347 KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSA 426 (861)
Q Consensus 347 KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~a 426 (861)
+.++..++|.+++.+++|+++ ++....+. . ....+.+..... +. + .+++.. ..+...
T Consensus 200 rllP~~l~aa~~l~~~~p~l~----fvvp~a~~-----~---~~~~i~~~~~~~----~~-~-~~~~~~-----~~~~~~ 256 (373)
T PF02684_consen 200 RLLPIFLEAAKLLKKQRPDLQ----FVVPVAPE-----V---HEELIEEILAEY----PP-D-VSIVII-----EGESYD 256 (373)
T ss_pred HHHHHHHHHHHHHHHhCCCeE----EEEecCCH-----H---HHHHHHHHHHhh----CC-C-CeEEEc-----CCchHH
Confidence 455888999999999999976 55444321 1 112222222221 11 1 122222 246778
Q ss_pred HHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCc-----eEeCCCCHHH
Q 002979 427 YYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGA-----IRVNPWDIDA 501 (861)
Q Consensus 427 ly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~a-----i~vnP~d~~~ 501 (861)
.++.||+.+++| |.+.+|++..+.|.--.=+..-.+. -=.-.+|-..+.|....+-+. ++-+--+++.
T Consensus 257 ~m~~ad~al~~S-----GTaTLE~Al~g~P~Vv~Yk~~~lt~--~iak~lvk~~~isL~Niia~~~v~PEliQ~~~~~~~ 329 (373)
T PF02684_consen 257 AMAAADAALAAS-----GTATLEAALLGVPMVVAYKVSPLTY--FIAKRLVKVKYISLPNIIAGREVVPELIQEDATPEN 329 (373)
T ss_pred HHHhCcchhhcC-----CHHHHHHHHhCCCEEEEEcCcHHHH--HHHHHhhcCCEeechhhhcCCCcchhhhcccCCHHH
Confidence 899999999999 8899999988665200000000000 000112235566666666331 3445567899
Q ss_pred HHHHHHHHhcCCHH
Q 002979 502 VADAMTLAINMRDS 515 (861)
Q Consensus 502 ~A~ai~~aL~m~~~ 515 (861)
+++++...|..++.
T Consensus 330 i~~~~~~ll~~~~~ 343 (373)
T PF02684_consen 330 IAAELLELLENPEK 343 (373)
T ss_pred HHHHHHHHhcCHHH
Confidence 99999999985443
No 266
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=94.32 E-value=0.18 Score=59.51 Aligned_cols=59 Identities=8% Similarity=0.088 Sum_probs=41.3
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
..+.+++=+|++++..-.....+-+.+.++++.| ++.|+.++++||........+.+.+
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l-~~~gi~~~~ltGD~~~~a~~ia~~l 384 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISEL-REAGIRVIMLTGDNVLTAKAIAKEL 384 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHH-HHCCCeEEEEcCCCHHHHHHHHHHc
Confidence 3444444455555542112445678888888888 6789999999999999999887543
No 267
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=94.30 E-value=0.19 Score=64.48 Aligned_cols=149 Identities=15% Similarity=0.197 Sum_probs=88.5
Q ss_pred CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEecCcEEEEeCCcceEEecCCccChHHHHHHHHH
Q 002979 609 IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAAEHGYFIRWNKTSEWETNHLGADLEWKKIVEPV 688 (861)
Q Consensus 609 ~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgliaenG~~i~~~~~~~~~~~~~~~~~~w~~~v~~i 688 (861)
..++-+++.++++++ ++.|++++++||........+.+. +|+...+... . ....
T Consensus 644 ~Dp~r~~v~~aI~~l-~~aGIkv~MiTGD~~~tA~~iA~~---~Gi~~~~~~~--~-~~~~------------------- 697 (1053)
T TIGR01523 644 YDPPRNESAGAVEKC-HQAGINVHMLTGDFPETAKAIAQE---VGIIPPNFIH--D-RDEI------------------- 697 (1053)
T ss_pred ecCCchhHHHHHHHH-HHCCCEEEEECCCCHHHHHHHHHH---cCCCCccccc--c-cccc-------------------
Confidence 446778999999998 899999999999999999999854 4554322110 0 0000
Q ss_pred HHHHhhcCCCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHH
Q 002979 689 MRSYTEATDGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVR 768 (861)
Q Consensus 689 ~~~y~~~~~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~ 768 (861)
.. .....- +++.....+++ .+..... . -+-.+.|. .|...++.+.+.
T Consensus 698 --------~~--------~~vitG----~~l~~l~~~~l----~~~~~~~--~-----V~ar~sP~--~K~~iV~~lq~~ 744 (1053)
T TIGR01523 698 --------MD--------SMVMTG----SQFDALSDEEV----DDLKALC--L-----VIARCAPQ--TKVKMIEALHRR 744 (1053)
T ss_pred --------cc--------ceeeeh----HHhhhcCHHHH----HHHhhcC--e-----EEEecCHH--HHHHHHHHHHhc
Confidence 00 000000 00000001111 1112111 1 12244554 488888877543
Q ss_pred hhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC-C----CcccceecC--CHhHHHHHHH
Q 002979 769 MFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR-K----PSKAKYYLD--DATDVLKLLQ 837 (861)
Q Consensus 769 l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~-~----~s~Aky~l~--d~~eV~~~L~ 837 (861)
| ..|.++||+.||.+|++.|+. +|++|. + +..|++++. +...+.+++.
T Consensus 745 ----g---~~Vam~GDGvNDapaLk~AdV--------------GIAmg~~gt~vak~aADivl~dd~f~~I~~~i~ 799 (1053)
T TIGR01523 745 ----K---AFCAMTGDGVNDSPSLKMANV--------------GIAMGINGSDVAKDASDIVLSDDNFASILNAIE 799 (1053)
T ss_pred ----C---CeeEEeCCCcchHHHHHhCCc--------------cEecCCCccHHHHHhcCEEEecCCHHHHHHHHH
Confidence 3 468999999999999999986 677873 2 467888873 4666665543
No 268
>PF08323 Glyco_transf_5: Starch synthase catalytic domain; InterPro: IPR013534 This region represents the catalytic domain of glycogen (or starch) synthases that use ADP-glucose (2.4.1.21 from EC), rather than UDP-glucose (2.4.1.11 from EC) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.; PDB: 2BIS_C 3L01_A 3FRO_A 2R4U_A 2R4T_A 3D1J_A 3COP_A 3GUH_A 2QZS_A 3CX4_A ....
Probab=94.25 E-value=0.17 Score=53.77 Aligned_cols=85 Identities=25% Similarity=0.527 Sum_probs=58.2
Q ss_pred HHHHHHHHHcCC---CCCEEEEeCcccccHHHHHHhhcC------CCeEEEEEecC-C----CChHHHhc--CCch----
Q 002979 186 IFADKVMEVINP---DDDCVWVHDYHLMVLPTFLRKRFN------RIKLGFFLHSP-F----PSSEIYRT--LPVR---- 245 (861)
Q Consensus 186 ~fa~~v~~~~~p---~~D~VwvhDyhl~llp~~lr~~~~------~~~i~~flH~P-f----P~~e~f~~--lp~r---- 245 (861)
.|+.++++.++. .-|+|++||.|-.++|.+|++... ++++.|.+|-. | |. +.+.. +|+.
T Consensus 118 ~fs~a~le~~~~l~~~pDIIH~hDW~tal~p~~lk~~~~~~~~~~~~~~v~TIHN~~yqg~~~~-~~~~~~gl~~~~~~~ 196 (245)
T PF08323_consen 118 FFSRAALELLKKLGWKPDIIHCHDWHTALAPLYLKERYQQDPFFANIPTVFTIHNLEYQGIFPP-EDLKALGLPDEYFQN 196 (245)
T ss_dssp HHHHHHHHHHCTCT-S-SEEEEECGGGTTHHHHHHHCCSS------SEEEEEESSTT---EEEG-GGGGCTT-GGGGS-S
T ss_pred HHHHHHHHHHHhhCCCCCEEEecCchHHHHHHHhccccccccccccceeEEEEcccccCCcCCH-HHHHHcCCCHHHhcc
Confidence 444444444421 239999999999999999998764 59999999952 2 32 22221 2321
Q ss_pred ----------HHHHHHhhcCCEEeecChHhHHHHHH
Q 002979 246 ----------DEILRGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 246 ----------~~il~~ll~~dligF~t~~~~~~Fl~ 271 (861)
.-+--|+..||.|-.-++.|++.-++
T Consensus 197 ~~~~~~~~~in~lk~gi~~AD~v~TVS~~Ya~Ei~~ 232 (245)
T PF08323_consen 197 LDEYEFYGQINFLKAGIVYADKVTTVSPTYAREIQT 232 (245)
T ss_dssp TTTTEETTEEEHHHHHHHHSSEEEESSHHHHHHTTS
T ss_pred ccccccccccCHHHHHHHhcCEeeeCCHHHHHHHhC
Confidence 35678899999999999999886654
No 269
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=94.22 E-value=0.044 Score=58.81 Aligned_cols=54 Identities=24% Similarity=0.337 Sum_probs=40.4
Q ss_pred ccceEEEecCCccccCCCC-------C----------------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHH
Q 002979 589 TERRAIFLDYDGTVVPETS-------I----------------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~-------~----------------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~ 643 (861)
.+..+|+||+|+|+++..+ . ...+-+.+.+.|+.+ +..|..++++|+|+.....
T Consensus 73 ~kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L-~~~G~~v~iVTnR~~~~~~ 149 (266)
T TIGR01533 73 DKKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYA-NSKGVKIFYVSNRSEKEKA 149 (266)
T ss_pred CCCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHH-HHCCCeEEEEeCCCcchHH
Confidence 3567999999999997321 0 112447778899998 7899999999999855444
No 270
>KOG3040 consensus Predicted sugar phosphatase (HAD superfamily) [General function prediction only]
Probab=94.06 E-value=0.54 Score=47.59 Aligned_cols=60 Identities=23% Similarity=0.290 Sum_probs=47.7
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
..|-+++|+-|||-. .+. ..+...++|+.| ++++..|=++|.-+.++-..+.+++.++|+
T Consensus 6 ~v~gvLlDlSGtLh~---e~~-avpga~eAl~rL-r~~~~kVkFvTNttk~Sk~~l~~rL~rlgf 65 (262)
T KOG3040|consen 6 AVKGVLLDLSGTLHI---EDA-AVPGAVEALKRL-RDQHVKVKFVTNTTKESKRNLHERLQRLGF 65 (262)
T ss_pred ccceEEEeccceEec---ccc-cCCCHHHHHHHH-HhcCceEEEEecCcchhHHHHHHHHHHhCC
Confidence 467899999999998 444 567888999999 889999999998887777666665555554
No 271
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=93.87 E-value=0.084 Score=51.75 Aligned_cols=70 Identities=17% Similarity=0.291 Sum_probs=46.6
Q ss_pred EEEecCCccccCCCC--------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChh---hHHHHhccccCCceEecCcEE
Q 002979 593 AIFLDYDGTVVPETS--------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRS---SLSEWLAPCEMLGIAAEHGYF 661 (861)
Q Consensus 593 lI~~DlDGTLl~~~~--------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~---~l~~~~~~~~~lgliaenG~~ 661 (861)
+|++|+|||++.... ......+.+.+..+++ +++|..++-+|+|+.. ..+.|+....+-+..--+|-.
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i-~~~GY~ilYlTaRp~~qa~~Tr~~L~~~~q~~~~lP~Gpv 79 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKI-ADNGYKILYLTARPIGQANRTRSWLAQHQQQGHNLPDGPV 79 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHH-HHCCeEEEEECcCcHHHHHHHHHHHHHHHhCCccCCCCCE
Confidence 489999999998310 0113457778899998 7999999999999975 444566544333333334444
Q ss_pred EE
Q 002979 662 IR 663 (861)
Q Consensus 662 i~ 663 (861)
+.
T Consensus 80 ~~ 81 (157)
T PF08235_consen 80 LL 81 (157)
T ss_pred EE
Confidence 33
No 272
>PF13439 Glyco_transf_4: Glycosyltransferase Family 4; PDB: 2JJM_E 3MBO_C 2GEJ_A 2GEK_A.
Probab=93.73 E-value=0.012 Score=57.73 Aligned_cols=99 Identities=14% Similarity=0.261 Sum_probs=48.0
Q ss_pred HHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCc-----hHHHHHH-hhcCCEEeecC
Q 002979 189 DKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPV-----RDEILRG-LLNCDLIGFHT 262 (861)
Q Consensus 189 ~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~-----r~~il~~-ll~~dligF~t 262 (861)
.++++..+| |+|++|.++...+...... +.++.+++|.+++.........+ ...+.+. .-.+|.+-.-+
T Consensus 73 ~~~i~~~~~--DiVh~~~~~~~~~~~~~~~---~~~~v~~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~vS 147 (177)
T PF13439_consen 73 RRLIKKEKP--DIVHIHGPPAFWIALLACR---KVPIVYTIHGPYFERRFLKSKLSPYSYLNFRIERKLYKKADRIIAVS 147 (177)
T ss_dssp HHHHHHHT---SEEECCTTHCCCHHHHHHH---CSCEEEEE-HHH--HHTTTTSCCCHHHHHHCTTHHHHCCSSEEEESS
T ss_pred HHHHHHcCC--CeEEecccchhHHHHHhcc---CCCEEEEeCCCcccccccccccchhhhhhhhhhhhHHhcCCEEEEEC
Confidence 344455577 8999999887765544333 78999999988853111111111 1111111 23567775555
Q ss_pred hHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHH
Q 002979 263 FDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLE 312 (861)
Q Consensus 263 ~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~ 312 (861)
..-++.+.+ .|+ ...++.++|+|||.+.|+
T Consensus 148 ~~~~~~l~~-----~~~---------------~~~ki~vI~ngid~~~F~ 177 (177)
T PF13439_consen 148 ESTKDELIK-----FGI---------------PPEKIHVIYNGIDTDRFR 177 (177)
T ss_dssp HHHHHHHHH-----HT-----------------SS-EEE----B-CCCH-
T ss_pred HHHHHHHHH-----hCC---------------cccCCEEEECCccHHHcC
Confidence 544443332 122 113678899999999873
No 273
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=93.65 E-value=0.34 Score=61.37 Aligned_cols=41 Identities=17% Similarity=0.362 Sum_probs=35.8
Q ss_pred CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 608 IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 608 ~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
...+|-+++.++++.+ ++.|+.++++||=.......+.+++
T Consensus 544 ~~Dppr~~v~~aI~~l-~~AGI~v~MiTGD~~~TA~aIa~~~ 584 (917)
T COG0474 544 IEDPPREDVKEAIEEL-REAGIKVWMITGDHVETAIAIAKEC 584 (917)
T ss_pred ccCCCCccHHHHHHHH-HHCCCcEEEECCCCHHHHHHHHHHc
Confidence 3445778999999998 8999999999999999999998654
No 274
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=93.58 E-value=0.1 Score=55.56 Aligned_cols=50 Identities=18% Similarity=0.311 Sum_probs=38.5
Q ss_pred ceEEEecCCccccCCCC-----------------C-------CCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002979 591 RRAIFLDYDGTVVPETS-----------------I-------IKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~-----------------~-------~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
+-+++||+|+|+++..+ . ..++-+.+++.++.+ ++.|..|+++|||+...
T Consensus 101 ~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l-~~~G~kIf~VSgR~e~~ 174 (275)
T TIGR01680 101 KDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKL-VSLGFKIIFLSGRLKDK 174 (275)
T ss_pred CCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHH-HHCCCEEEEEeCCchhH
Confidence 46899999999994110 0 223457888899998 79999999999998654
No 275
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=92.89 E-value=4.3 Score=45.38 Aligned_cols=292 Identities=14% Similarity=0.122 Sum_probs=142.8
Q ss_pred HhHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcc--cccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHh
Q 002979 175 VLWQAYVSANKIFADKVMEVINPDDDCVWVHDYH--LMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGL 252 (861)
Q Consensus 175 ~~w~~Y~~vN~~fa~~v~~~~~p~~D~VwvhDyh--l~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~l 252 (861)
..|..|++.=+.+ .+ -+| |++..=||- =..|...||+..|+.||..+.- +.+| .||+.=...+
T Consensus 69 ~llk~~~~~~~~i----~~-~kp--D~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~-----PsVW---AWr~~Ra~~i 133 (381)
T COG0763 69 RLLKIRRELVRYI----LA-NKP--DVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVS-----PSVW---AWRPKRAVKI 133 (381)
T ss_pred HHHHHHHHHHHHH----Hh-cCC--CEEEEeCCCCCchHHHHHHHHhCCCCCeEEEEC-----ccee---eechhhHHHH
Confidence 4566665544433 22 256 777776665 2457889999999999998873 3333 3443333222
Q ss_pred h-cCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc
Q 002979 253 L-NCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF 331 (861)
Q Consensus 253 l-~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~ 331 (861)
. .+|++.--.+ +-..|... .|+ -..|-|++. .|.-.+. + ..+..|+++
T Consensus 134 ~~~~D~lLailP-FE~~~y~k----~g~---------~~~yVGHpl--------~d~i~~~-----~----~r~~ar~~l 182 (381)
T COG0763 134 AKYVDHLLAILP-FEPAFYDK----FGL---------PCTYVGHPL--------ADEIPLL-----P----DREAAREKL 182 (381)
T ss_pred HHHhhHeeeecC-CCHHHHHh----cCC---------CeEEeCChh--------hhhcccc-----c----cHHHHHHHh
Confidence 2 2454432211 11222220 011 123444432 1111111 1 112244444
Q ss_pred ----CCCeEEEee--cCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccC
Q 002979 332 ----DGKKLILGI--DDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYG 405 (861)
Q Consensus 332 ----~~~~vil~V--drld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~ 405 (861)
..+.+.+-- -|=+...-++..++|++++.+++|+++ ++.-..+ ..++.++.+... .
T Consensus 183 ~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~----~vlp~~~-----~~~~~~~~~~~~---~------ 244 (381)
T COG0763 183 GIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLK----FVLPLVN-----AKYRRIIEEALK---W------ 244 (381)
T ss_pred CCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCce----EEEecCc-----HHHHHHHHHHhh---c------
Confidence 334443332 234556667788899999999999988 5543322 233333333221 1
Q ss_pred CCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc
Q 002979 406 SPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (861)
Q Consensus 406 ~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (861)
....+.+++ ...+....+.+||+.+..| |.+.+|++.|+.|..-.-+..-...- =.-.+|-.-+.+..
T Consensus 245 -~~~~~~~~~----~~~~~~~a~~~aD~al~aS-----GT~tLE~aL~g~P~Vv~Yk~~~it~~--iak~lvk~~yisLp 312 (381)
T COG0763 245 -EVAGLSLIL----IDGEKRKAFAAADAALAAS-----GTATLEAALAGTPMVVAYKVKPITYF--IAKRLVKLPYVSLP 312 (381)
T ss_pred -cccCceEEe----cCchHHHHHHHhhHHHHhc-----cHHHHHHHHhCCCEEEEEeccHHHHH--HHHHhccCCcccch
Confidence 010122222 2457888899999999999 88999999996652000000000000 00001112233333
Q ss_pred ccCCCceEe-----CCCCHHHHHHHHHHHhcCCHH--HHHHHHHHhhhhhccCCHhHHHHHHHH
Q 002979 486 PSLSGAIRV-----NPWDIDAVADAMTLAINMRDS--EKQLRHEKHYRYVSTHDVAYWARSFAQ 542 (861)
Q Consensus 486 ~~l~~ai~v-----nP~d~~~~A~ai~~aL~m~~~--e~~~r~~~~~~~v~~~~~~~W~~~fl~ 542 (861)
..+-+..+| .--.++.+|+++...+..+.. +.....+.+++++.+..+..-+.+.+-
T Consensus 313 NIi~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l~~~~~~e~aA~~vl 376 (381)
T COG0763 313 NILAGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYLREDPASEIAAQAVL 376 (381)
T ss_pred HHhcCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHHcCCcHHHHHHHHHH
Confidence 333222111 112358899999988875521 223344455555555534444444433
No 276
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=92.26 E-value=0.019 Score=60.37 Aligned_cols=74 Identities=18% Similarity=0.226 Sum_probs=48.0
Q ss_pred ccceEEEecCCccccCCCC-----------------------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHH
Q 002979 589 TERRAIFLDYDGTVVPETS-----------------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEW 645 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~-----------------------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~ 645 (861)
.+..+|+||+|+|+++... .....-+.+++.++.+ .+.|..|+++|||+...-..-
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~-~~~G~~V~~iT~R~~~~r~~T 148 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYA-RSRGVKVFFITGRPESQREAT 148 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHH-HHTTEEEEEEEEEETTCHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHH-HHCCCeEEEEecCCchhHHHH
Confidence 4567999999999986110 0112346688899998 799999999999998744433
Q ss_pred hccccCCceEecCcEEEE
Q 002979 646 LAPCEMLGIAAEHGYFIR 663 (861)
Q Consensus 646 ~~~~~~lgliaenG~~i~ 663 (861)
...+...|+....+.+++
T Consensus 149 ~~nL~~~G~~~~~~l~lr 166 (229)
T PF03767_consen 149 EKNLKKAGFPGWDHLILR 166 (229)
T ss_dssp HHHHHHHTTSTBSCGEEE
T ss_pred HHHHHHcCCCccchhccc
Confidence 333334444333444444
No 277
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=92.25 E-value=3.2 Score=45.47 Aligned_cols=168 Identities=15% Similarity=0.205 Sum_probs=107.2
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhC---CCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCc
Q 002979 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQH---PGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNY 409 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~---P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~ 409 (861)
...++++--...+...+.-+|.|++..-++. +.---++ |.+|+ |.||..+.+.++|++ ..|
T Consensus 254 ~pallvsSTswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~l-lciIT----GKGPlkE~Y~~~I~~-----------~~~ 317 (444)
T KOG2941|consen 254 RPALLVSSTSWTPDEDFGILLEALVIYEEQLYDKTHNLPSL-LCIIT----GKGPLKEKYSQEIHE-----------KNL 317 (444)
T ss_pred CCeEEEecCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcE-EEEEc----CCCchhHHHHHHHHH-----------hcc
Confidence 4578888889999999999999998542221 1001122 33344 377887888888875 457
Q ss_pred ccEEEEcCCCCHHHHHHHHHhccc--ceecccccCCCCcc--eeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCc
Q 002979 410 EPVVLIDRPVPRFEKSAYYAVAEC--CIVNAVRDGMNLVP--YKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCS 485 (861)
Q Consensus 410 ~pvv~~~~~v~~~el~aly~~ADv--~vvtS~~EG~nLv~--~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~ 485 (861)
+.|.+..--++-++...++..||. |+=|| .-|+-|+- ..-.-| +-|+++-.|. |-
T Consensus 318 ~~v~~~tpWL~aEDYP~ll~saDlGVcLHtS-SSGLDLPMKVVDMFGc-------------------glPvcA~~fk-cl 376 (444)
T KOG2941|consen 318 QHVQVCTPWLEAEDYPKLLASADLGVCLHTS-SSGLDLPMKVVDMFGC-------------------GLPVCAVNFK-CL 376 (444)
T ss_pred cceeeeecccccccchhHhhccccceEeeec-CcccCcchhHHHhhcC-------------------CCceeeecch-hH
Confidence 777777878899999999999996 45555 34555543 233333 2345555554 55
Q ss_pred ccC----CCceEeCCCCHHHHHHHHHHHhcC---CHHHHHHHHHHhhhhhccCCHhHHHHHHHHH
Q 002979 486 PSL----SGAIRVNPWDIDAVADAMTLAINM---RDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (861)
Q Consensus 486 ~~l----~~ai~vnP~d~~~~A~ai~~aL~m---~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~ 543 (861)
.+| .+|++++ |.+++|+.|..+.+- +..+-. +..+.+.+....+|.+++-+-
T Consensus 377 ~ELVkh~eNGlvF~--Ds~eLa~ql~~lf~~fp~~a~~l~----~lkkn~~e~~e~RW~~~W~~~ 435 (444)
T KOG2941|consen 377 DELVKHGENGLVFE--DSEELAEQLQMLFKNFPDNADELN----QLKKNLREEQELRWDESWERT 435 (444)
T ss_pred HHHHhcCCCceEec--cHHHHHHHHHHHHhcCCCCHHHHH----HHHHhhHHHHhhhHHHHHHHh
Confidence 555 4588886 799999999998872 222221 223333344557777766543
No 278
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=91.75 E-value=4.9 Score=45.42 Aligned_cols=73 Identities=14% Similarity=0.095 Sum_probs=50.4
Q ss_pred cEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-C
Q 002979 411 PVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-S 489 (861)
Q Consensus 411 pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~ 489 (861)
|.+.+.++++..++.++++.|+++|-.|- =++ .||.+.+.| +|. .|-.++. .
T Consensus 262 ~~v~l~~~l~~~~~l~Ll~~a~~vitdSS---ggi--~EA~~lg~P-------------------vv~---l~~R~e~~~ 314 (365)
T TIGR03568 262 PNFRLFKSLGQERYLSLLKNADAVIGNSS---SGI--IEAPSFGVP-------------------TIN---IGTRQKGRL 314 (365)
T ss_pred CCEEEECCCChHHHHHHHHhCCEEEEcCh---hHH--HhhhhcCCC-------------------EEe---ecCCchhhh
Confidence 44677889999999999999999884442 122 799998554 331 1223333 2
Q ss_pred -C-c-eEeCCCCHHHHHHHHHHHhc
Q 002979 490 -G-A-IRVNPWDIDAVADAMTLAIN 511 (861)
Q Consensus 490 -~-a-i~vnP~d~~~~A~ai~~aL~ 511 (861)
| . +.| +.|.+++.+++.++++
T Consensus 315 ~g~nvl~v-g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 315 RADSVIDV-DPDKEEIVKAIEKLLD 338 (365)
T ss_pred hcCeEEEe-CCCHHHHHHHHHHHhC
Confidence 2 3 446 7799999999999654
No 279
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=91.60 E-value=1.2 Score=50.90 Aligned_cols=138 Identities=12% Similarity=0.091 Sum_probs=79.4
Q ss_pred CeEEEeecC-cccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhh---------c
Q 002979 334 KKLILGIDD-MDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINE---------V 403 (861)
Q Consensus 334 ~~vil~Vdr-ld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~---------~ 403 (861)
..++++-+| =+..++++..++|++++.++ |++ .++....+. .+++.+++.+.+. .++. .
T Consensus 207 ~lllLpGSR~ae~~~~lp~~l~al~~L~~~-~~~----~~v~~~~~~----~~~~~~~~~l~~~--g~~~~~~~~~~~~~ 275 (396)
T TIGR03492 207 RIALLPGSRPPEAYRNLKLLLRALEALPDS-QPF----VFLAAIVPS----LSLEKLQAILEDL--GWQLEGSSEDQTSL 275 (396)
T ss_pred EEEEECCCCHHHHHccHHHHHHHHHHHhhC-CCe----EEEEEeCCC----CCHHHHHHHHHhc--CceecCCccccchh
Confidence 355677888 55667888999999998655 543 355444232 2334444433211 0000 0
Q ss_pred cCCCCcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCC
Q 002979 404 YGSPNYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIG 483 (861)
Q Consensus 404 ~~~~~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G 483 (861)
|.. .++.++. ...+...+|+.||++|..| |-+..|+++++.| .|+--+.+
T Consensus 276 ~~~---~~~~v~~---~~~~~~~~l~~ADlvI~rS-----Gt~T~E~a~lg~P-------------------~Ilip~~~ 325 (396)
T TIGR03492 276 FQK---GTLEVLL---GRGAFAEILHWADLGIAMA-----GTATEQAVGLGKP-------------------VIQLPGKG 325 (396)
T ss_pred hcc---CceEEEe---chHhHHHHHHhCCEEEECc-----CHHHHHHHHhCCC-------------------EEEEeCCC
Confidence 000 0122211 2457889999999999886 3555999998654 23322111
Q ss_pred C------ccc---C-CCceEeCCCCHHHHHHHHHHHhcC
Q 002979 484 C------SPS---L-SGAIRVNPWDIDAVADAMTLAINM 512 (861)
Q Consensus 484 ~------~~~---l-~~ai~vnP~d~~~~A~ai~~aL~m 512 (861)
- .+. + .+++.+...+.+.++++|.+.|+.
T Consensus 326 ~q~na~~~~~~~~l~g~~~~l~~~~~~~l~~~l~~ll~d 364 (396)
T TIGR03492 326 PQFTYGFAEAQSRLLGGSVFLASKNPEQAAQVVRQLLAD 364 (396)
T ss_pred CHHHHHHHHhhHhhcCCEEecCCCCHHHHHHHHHHHHcC
Confidence 1 011 1 345555567789999999999873
No 280
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=91.21 E-value=9.2 Score=43.42 Aligned_cols=74 Identities=14% Similarity=0.157 Sum_probs=48.3
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC----ccc
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC----SPS 487 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~----~~~ 487 (861)
-+.+.+.+|+.+ ++..||++| .+-|+| +..|+++++.| +|+--+.+- +..
T Consensus 289 ~v~~~~~~p~~~---ll~~~d~~I---~hgG~~-t~~eal~~GvP-------------------~v~~P~~~dQ~~~a~~ 342 (401)
T cd03784 289 NVRVVDFVPHDW---LLPRCAAVV---HHGGAG-TTAAALRAGVP-------------------QLVVPFFGDQPFWAAR 342 (401)
T ss_pred ceEEeCCCCHHH---Hhhhhheee---ecCCch-hHHHHHHcCCC-------------------EEeeCCCCCcHHHHHH
Confidence 345666777655 477799998 566765 67899999654 444333331 111
Q ss_pred C---CCceEeCCC--CHHHHHHHHHHHhc
Q 002979 488 L---SGAIRVNPW--DIDAVADAMTLAIN 511 (861)
Q Consensus 488 l---~~ai~vnP~--d~~~~A~ai~~aL~ 511 (861)
+ +-|+.+++. +.+++++++.++|+
T Consensus 343 ~~~~G~g~~l~~~~~~~~~l~~al~~~l~ 371 (401)
T cd03784 343 VAELGAGPALDPRELTAERLAAALRRLLD 371 (401)
T ss_pred HHHCCCCCCCCcccCCHHHHHHHHHHHhC
Confidence 2 225555554 68999999999997
No 281
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=90.55 E-value=3.5 Score=41.22 Aligned_cols=47 Identities=15% Similarity=0.236 Sum_probs=32.9
Q ss_pred CeEEEEecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 746 QHIVEVKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 746 ~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
-.++||.|. +|-.-.+.|.+.. |+++++++.|=|...-.+--+..|.
T Consensus 99 F~~~eI~~g--sK~~Hf~~i~~~t---gI~y~eMlFFDDe~~N~~~v~~lGV 145 (169)
T PF12689_consen 99 FDYLEIYPG--SKTTHFRRIHRKT---GIPYEEMLFFDDESRNIEVVSKLGV 145 (169)
T ss_dssp ECEEEESSS---HHHHHHHHHHHH------GGGEEEEES-HHHHHHHHTTT-
T ss_pred cchhheecC--chHHHHHHHHHhc---CCChhHEEEecCchhcceeeEecCc
Confidence 356899996 8999999999998 9999999999997655555555654
No 282
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=90.05 E-value=1.5 Score=53.03 Aligned_cols=56 Identities=18% Similarity=0.329 Sum_probs=45.4
Q ss_pred HHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 586 YRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 586 y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
|......|.|+-+=|-+=| |-+++.++++.+ ++.|+.|..+||-.......+.+++
T Consensus 566 ~~~~E~~LtFvGlVGi~DP-------PR~ev~~ai~~c-~~aGIrV~mITGD~~~TA~AI~r~i 621 (972)
T KOG0202|consen 566 RATAESDLTFVGLVGILDP-------PRPEVADAIELC-RQAGIRVIMITGDNKETAEAIAREI 621 (972)
T ss_pred ccccccceEEEEEeeccCC-------CchhHHHHHHHH-HHcCCEEEEEcCCCHHHHHHHHHHh
Confidence 3344567888887665544 779999999997 8999999999999999999998543
No 283
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=89.79 E-value=1.9 Score=49.89 Aligned_cols=101 Identities=18% Similarity=0.251 Sum_probs=59.8
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002979 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
++..++.+..++ .|=-+..+..+.++|+.-|+-+ |++...|.. +. +.++ +.+++ +|- .-.-
T Consensus 283 ~d~vvF~~fn~~--~KI~p~~l~~W~~IL~~vP~S~----L~L~~~~~~--~~--~~l~----~~~~~----~Gv-~~~R 343 (468)
T PF13844_consen 283 EDAVVFGSFNNL--FKISPETLDLWARILKAVPNSR----LWLLRFPAS--GE--ARLR----RRFAA----HGV-DPDR 343 (468)
T ss_dssp SSSEEEEE-S-G--GG--HHHHHHHHHHHHHSTTEE----EEEEETSTT--HH--HHHH----HHHHH----TTS--GGG
T ss_pred CCceEEEecCcc--ccCCHHHHHHHHHHHHhCCCcE----EEEeeCCHH--HH--HHHH----HHHHH----cCC-Chhh
Confidence 566666667776 4556899999999999999866 766665431 11 2222 22222 232 2222
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeee
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac 453 (861)
+ .|.+..+.+|..+.|+.+|||+-|..+-|- .+.+||+.+
T Consensus 344 i-~f~~~~~~~ehl~~~~~~DI~LDT~p~nG~-TTt~dALwm 383 (468)
T PF13844_consen 344 I-IFSPVAPREEHLRRYQLADICLDTFPYNGG-TTTLDALWM 383 (468)
T ss_dssp E-EEEE---HHHHHHHGGG-SEEE--SSS--S-HHHHHHHHH
T ss_pred E-EEcCCCCHHHHHHHhhhCCEEeeCCCCCCc-HHHHHHHHc
Confidence 4 456677889999999999999999877774 577899998
No 284
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=89.63 E-value=41 Score=37.96 Aligned_cols=137 Identities=15% Similarity=0.144 Sum_probs=84.4
Q ss_pred CeEEEeecCcccc-cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002979 334 KKLILGIDDMDIF-KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 334 ~~vil~Vdrld~~-KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
+-+++..-|-.-. +++...+.|+.++++++|+.. +|.-..| | +.+++.. +.+++. .+.
T Consensus 205 ~~iLvT~HRreN~~~~~~~i~~al~~i~~~~~~~~----viyp~H~-~---~~v~e~~----------~~~L~~---~~~ 263 (383)
T COG0381 205 KYILVTAHRRENVGEPLEEICEALREIAEEYPDVI----VIYPVHP-R---PRVRELV----------LKRLKN---VER 263 (383)
T ss_pred cEEEEEcchhhcccccHHHHHHHHHHHHHhCCCce----EEEeCCC-C---hhhhHHH----------HHHhCC---CCc
Confidence 4566777777665 999999999999999998865 3322222 1 3333322 112222 233
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-C-
Q 002979 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-G- 490 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~- 490 (861)
+.+..++...+...|...|-+.+--| |=.--||-.-+.| ++++=+.+.=.+.+. |
T Consensus 264 v~li~pl~~~~f~~L~~~a~~iltDS-----GgiqEEAp~lg~P------------------vl~lR~~TERPE~v~agt 320 (383)
T COG0381 264 VKLIDPLGYLDFHNLMKNAFLILTDS-----GGIQEEAPSLGKP------------------VLVLRDTTERPEGVEAGT 320 (383)
T ss_pred EEEeCCcchHHHHHHHHhceEEEecC-----CchhhhHHhcCCc------------------EEeeccCCCCccceecCc
Confidence 55666899999999999996555444 2223344444222 344444444444443 3
Q ss_pred ceEeCCCCHHHHHHHHHHHhcCCHH
Q 002979 491 AIRVNPWDIDAVADAMTLAINMRDS 515 (861)
Q Consensus 491 ai~vnP~d~~~~A~ai~~aL~m~~~ 515 (861)
.++|++ |.+.+.+++..+++.++.
T Consensus 321 ~~lvg~-~~~~i~~~~~~ll~~~~~ 344 (383)
T COG0381 321 NILVGT-DEENILDAATELLEDEEF 344 (383)
T ss_pred eEEeCc-cHHHHHHHHHHHhhChHH
Confidence 356654 789999999999986544
No 285
>PLN02811 hydrolase
Probab=88.38 E-value=0.72 Score=48.05 Aligned_cols=63 Identities=16% Similarity=0.067 Sum_probs=45.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCCCC----cccceecCCHhH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGRKP----SKAKYYLDDATD 831 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~----s~Aky~l~d~~e 831 (861)
+......+++++...|++++++++|||+..|+.+.+.+|.. +++|+.|... ..+++++++..+
T Consensus 139 ~p~~~~~a~~~~~~~~~~~~~~v~IgDs~~di~aA~~aG~~-----------~i~v~~~~~~~~~~~~~d~vi~~~~e 205 (220)
T PLN02811 139 APDIFLAAARRFEDGPVDPGKVLVFEDAPSGVEAAKNAGMS-----------VVMVPDPRLDKSYCKGADQVLSSLLD 205 (220)
T ss_pred CcHHHHHHHHHhCCCCCCccceEEEeccHhhHHHHHHCCCe-----------EEEEeCCCCcHhhhhchhhHhcCHhh
Confidence 66788888898811128899999999999999999999973 4566555321 245566666655
No 286
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=87.59 E-value=0.25 Score=48.57 Aligned_cols=57 Identities=23% Similarity=0.276 Sum_probs=38.5
Q ss_pred eEEEecCCccccCCCCCCCC----------------CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcccc
Q 002979 592 RAIFLDYDGTVVPETSIIKS----------------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCE 650 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~~----------------~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~ 650 (861)
|++++|+||||+........ .-|.+.+.|+.+ .+...++|.|..+...+..++..+.
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l--~~~~ev~i~T~~~~~ya~~v~~~ld 73 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEEL--SKHYEVVIWTSASEEYAEPVLDALD 73 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHH--HHHCEEEEE-SS-HHHHHHHHHHHT
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHH--HHhceEEEEEeehhhhhhHHHHhhh
Confidence 68999999999984321110 236777778877 3558999999999988888876653
No 287
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=87.19 E-value=56 Score=36.64 Aligned_cols=259 Identities=16% Similarity=0.077 Sum_probs=128.6
Q ss_pred HHHHHHHHHHHHHHHcCCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhh--cCCE
Q 002979 180 YVSANKIFADKVMEVINPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLL--NCDL 257 (861)
Q Consensus 180 Y~~vN~~fa~~v~~~~~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll--~~dl 257 (861)
.-.+=..|++.+ +..+| |+|.||.=-.-.|..-+-....+++|+.. |---=+.| .+-|.-+|+.|-+. -||+
T Consensus 52 ~~~~~~~~~~~~-~~~~P--d~Vlv~GD~~~~la~alaA~~~~ipv~Hi-eaGlRs~d--~~~g~~de~~R~~i~~la~l 125 (346)
T PF02350_consen 52 TGLAIIELADVL-EREKP--DAVLVLGDRNEALAAALAAFYLNIPVAHI-EAGLRSGD--RTEGMPDEINRHAIDKLAHL 125 (346)
T ss_dssp HHHHHHHHHHHH-HHHT---SEEEEETTSHHHHHHHHHHHHTT-EEEEE-S-----S---TTSSTTHHHHHHHHHHH-SE
T ss_pred HHHHHHHHHHHH-HhcCC--CEEEEEcCCchHHHHHHHHHHhCCCEEEe-cCCCCccc--cCCCCchhhhhhhhhhhhhh
Confidence 333344444444 44488 89999988887777777666667775533 21100111 11233445544442 2677
Q ss_pred EeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHcCCCeEE
Q 002979 258 IGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQFDGKKLI 337 (861)
Q Consensus 258 igF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~~~~~vi 337 (861)
----|..+.++.++ .|.+. ++ +.. +-.+++|.-........+... ...+.....++.++
T Consensus 126 hf~~t~~~~~~L~~-----~G~~~--~r----I~~--------vG~~~~D~l~~~~~~~~~~~~--~~~i~~~~~~~~iL 184 (346)
T PF02350_consen 126 HFAPTEEARERLLQ-----EGEPP--ER----IFV--------VGNPGIDALLQNKEEIEEKYK--NSGILQDAPKPYIL 184 (346)
T ss_dssp EEESSHHHHHHHHH-----TT--G--GG----EEE-----------HHHHHHHHHHHTTCC-HH--HHHHHHCTTSEEEE
T ss_pred hccCCHHHHHHHHh-----cCCCC--Ce----EEE--------EChHHHHHHHHhHHHHhhhhh--hHHHHhccCCCEEE
Confidence 66677777777765 24321 11 111 124566654332211111110 11222223445556
Q ss_pred EeecCcccc---cCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002979 338 LGIDDMDIF---KGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (861)
Q Consensus 338 l~Vdrld~~---KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~ 414 (861)
+..=|.... ......+.+++.+.+. +++. +|....++ +...+.+.+...+ + +-+.
T Consensus 185 vt~H~~t~~~~~~~~~~i~~~l~~L~~~-~~~~----vi~~~hn~-------p~~~~~i~~~l~~---------~-~~v~ 242 (346)
T PF02350_consen 185 VTLHPVTNEDNPERLEQILEALKALAER-QNVP----VIFPLHNN-------PRGSDIIIEKLKK---------Y-DNVR 242 (346)
T ss_dssp EE-S-CCCCTHH--HHHHHHHHHHHHHH-TTEE----EEEE--S--------HHHHHHHHHHHTT-----------TTEE
T ss_pred EEeCcchhcCChHHHHHHHHHHHHHHhc-CCCc----EEEEecCC-------chHHHHHHHHhcc---------c-CCEE
Confidence 666555433 3466777788888777 5543 44444222 1222222221111 1 1334
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC---CCc
Q 002979 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL---SGA 491 (861)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l---~~a 491 (861)
+..+++..++.++++.|+++|-.|- | +..||..++.| +|.=...|-.++. ...
T Consensus 243 ~~~~l~~~~~l~ll~~a~~vvgdSs--G---I~eEa~~lg~P-------------------~v~iR~~geRqe~r~~~~n 298 (346)
T PF02350_consen 243 LIEPLGYEEYLSLLKNADLVVGDSS--G---IQEEAPSLGKP-------------------VVNIRDSGERQEGRERGSN 298 (346)
T ss_dssp EE----HHHHHHHHHHESEEEESSH--H---HHHHGGGGT---------------------EEECSSS-S-HHHHHTTSE
T ss_pred EECCCCHHHHHHHHhcceEEEEcCc--c---HHHHHHHhCCe-------------------EEEecCCCCCHHHHhhcce
Confidence 5568999999999999999987773 2 23488888443 4544555555555 345
Q ss_pred eEeCCCCHHHHHHHHHHHhcC
Q 002979 492 IRVNPWDIDAVADAMTLAINM 512 (861)
Q Consensus 492 i~vnP~d~~~~A~ai~~aL~m 512 (861)
++|. .|.+++.+||.+++..
T Consensus 299 vlv~-~~~~~I~~ai~~~l~~ 318 (346)
T PF02350_consen 299 VLVG-TDPEAIIQAIEKALSD 318 (346)
T ss_dssp EEET-SSHHHHHHHHHHHHH-
T ss_pred EEeC-CCHHHHHHHHHHHHhC
Confidence 6664 8999999999999974
No 288
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=86.42 E-value=4.5 Score=49.63 Aligned_cols=68 Identities=10% Similarity=0.209 Sum_probs=50.4
Q ss_pred HHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002979 579 IDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 579 ~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
++..++.-.+...-.+.+=+||+|+.--.....+-++...++..| +..|+.+++.||-....+....+
T Consensus 691 i~~~~~~~e~~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~L-k~~Gi~v~mLTGDn~~aA~svA~ 758 (951)
T KOG0207|consen 691 ILDALTESERKGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAEL-KSMGIKVVMLTGDNDAAARSVAQ 758 (951)
T ss_pred HHHhhhhHhhcCceEEEEEECCEEEEEEEeccccchhHHHHHHHH-HhcCceEEEEcCCCHHHHHHHHH
Confidence 444445555667789999999999862223445667888888888 78899999999988888777764
No 289
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=86.04 E-value=1.1 Score=45.90 Aligned_cols=58 Identities=16% Similarity=0.164 Sum_probs=42.6
Q ss_pred ccceEEEecCCccccCCCCCCCC----CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 589 TERRAIFLDYDGTVVPETSIIKS----PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~----~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
..+|++++|+|+||++..+.... .-|.+.+.|+.+. +...|+|=|..+...+...+..
T Consensus 19 ~~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~--~~feIvVwTAa~~~ya~~~l~~ 80 (195)
T TIGR02245 19 EGKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAY--EDYDIVIWSATSMKWIEIKMTE 80 (195)
T ss_pred CCCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHH--hCCEEEEEecCCHHHHHHHHHH
Confidence 45689999999999984322211 2367788888873 4788999998888888877643
No 290
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=85.75 E-value=2.7 Score=43.20 Aligned_cols=37 Identities=24% Similarity=0.232 Sum_probs=28.8
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
|...++.+++.- +++.. ++|+|||.+|.+||+.+...
T Consensus 192 ka~i~e~~~ele---~~d~s-a~~VGDSItDv~ml~~~rgr 228 (315)
T COG4030 192 KAKIMEGYCELE---GIDFS-AVVVGDSITDVKMLEAARGR 228 (315)
T ss_pred hhHHHHHHHhhc---CCCcc-eeEecCcccchHHHHHhhcc
Confidence 666677777654 55544 89999999999999999753
No 291
>KOG0206 consensus P-type ATPase [General function prediction only]
Probab=85.63 E-value=3.6 Score=52.39 Aligned_cols=42 Identities=19% Similarity=0.249 Sum_probs=32.2
Q ss_pred EecCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 751 VKPQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 751 I~p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
.+....-|+..++.+.+. ....++||||+.||..|++.|..+
T Consensus 775 CR~sPlQKA~Vv~lVk~~------~~~~TLAIGDGANDVsMIQ~AhVG 816 (1151)
T KOG0206|consen 775 CRVSPLQKALVVKLVKKG------LKAVTLAIGDGANDVSMIQEAHVG 816 (1151)
T ss_pred ccCCHHHHHHHHHHHHhc------CCceEEEeeCCCccchheeeCCcC
Confidence 333334499999988443 356799999999999999988764
No 292
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=85.61 E-value=2.2 Score=45.60 Aligned_cols=59 Identities=19% Similarity=0.300 Sum_probs=46.1
Q ss_pred ccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 589 TERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 589 s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
....+|+||+|.||+.......-..+.+.+.|.+| ++.|..+++=|--+.+-+..-+..
T Consensus 120 ~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~L-k~~g~vLvLWSyG~~eHV~~sl~~ 178 (297)
T PF05152_consen 120 EPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLREL-KEQGCVLVLWSYGNREHVRHSLKE 178 (297)
T ss_pred CCCcEEEEECCCcccccCCccccCChHHHHHHHHH-HHcCCEEEEecCCCHHHHHHHHHH
Confidence 34569999999999984322334679999999999 899999999887777777766644
No 293
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=85.54 E-value=1.7 Score=49.46 Aligned_cols=71 Identities=15% Similarity=0.149 Sum_probs=55.6
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCCC-------------CCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHH
Q 002979 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETS-------------IIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSE 644 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~~-------------~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~ 644 (861)
.+.+++.+-.....|.+++|+|+||..-.- .....-.+..+.+..| .++|+.++|||-.....+++
T Consensus 209 ei~Sl~~A~~g~~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l-~kqGVlLav~SKN~~~da~e 287 (574)
T COG3882 209 EIASLLAAMSGKSKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGL-KKQGVLLAVCSKNTEKDAKE 287 (574)
T ss_pred HHHHHHHHhhCcccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHH-HhccEEEEEecCCchhhHHH
Confidence 456777777778899999999999986210 1123346677788888 89999999999999999999
Q ss_pred Hhccc
Q 002979 645 WLAPC 649 (861)
Q Consensus 645 ~~~~~ 649 (861)
.|..-
T Consensus 288 vF~kh 292 (574)
T COG3882 288 VFRKH 292 (574)
T ss_pred HHhhC
Confidence 98653
No 294
>KOG3109 consensus Haloacid dehalogenase-like hydrolase [General function prediction only]
Probab=84.93 E-value=1.3 Score=45.49 Aligned_cols=76 Identities=21% Similarity=0.206 Sum_probs=54.3
Q ss_pred eEEEEecCCCCHHHHHHHHHHHhhcCCCC-CCeEEEEeCCcchHHHHHHccccCCCCCCCCCCceEEEEeCC--CCcccc
Q 002979 747 HIVEVKPQGVSKGLVAEKVLVRMFNGGRP-PDFVMCVGDDRSDEDMFESILSTVSGPSLPVPPEIFACTVGR--KPSKAK 823 (861)
Q Consensus 747 ~~vEI~p~gvsKg~al~~ll~~l~~~gi~-~d~vlaiGD~~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~--~~s~Ak 823 (861)
.-+-.+| -..|.++.+... |+. |.++++|-||.+-+.--+.+|.. +|-||. +...+.
T Consensus 155 ~~~vcKP----~~~afE~a~k~a---gi~~p~~t~FfDDS~~NI~~ak~vGl~-------------tvlv~~~~~~~~~d 214 (244)
T KOG3109|consen 155 KTVVCKP----SEEAFEKAMKVA---GIDSPRNTYFFDDSERNIQTAKEVGLK-------------TVLVGREHKIKGVD 214 (244)
T ss_pred CceeecC----CHHHHHHHHHHh---CCCCcCceEEEcCchhhHHHHHhccce-------------eEEEEeeecccchH
Confidence 3455555 356888888887 998 99999999999999999999973 566664 456667
Q ss_pred eecCCHhHHHHHHHHHHhh
Q 002979 824 YYLDDATDVLKLLQGLATA 842 (861)
Q Consensus 824 y~l~d~~eV~~~L~~L~~~ 842 (861)
|.+.+.....+.+-.|...
T Consensus 215 ~~l~~ih~~k~a~p~l~~~ 233 (244)
T KOG3109|consen 215 YALEQIHNNKEALPELWEI 233 (244)
T ss_pred HHHHHhhchhhhchHHhhc
Confidence 7666555555555555444
No 295
>KOG0208 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=84.49 E-value=1.7 Score=53.29 Aligned_cols=78 Identities=22% Similarity=0.350 Sum_probs=48.6
Q ss_pred ceeeeccCcccccCCHHHHHHHHHhccceEEEecCC--ccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002979 564 GFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYD--GTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 564 ~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlD--GTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
||||+|+-. +.|....+.++ .+.++-.+=.|++ |=++- ..++-+++..+|++| ++.++..++|||-+...
T Consensus 663 GfRVIAlA~--K~L~~~~~~~~-~~~~Rd~vEs~l~FlGLiVm----eNkLK~~T~~VI~eL-~~AnIRtVMcTGDNllT 734 (1140)
T KOG0208|consen 663 GFRVIALAS--KELETSTLQKA-QKLSRDTVESNLEFLGLIVM----ENKLKEETKRVIDEL-NRANIRTVMCTGDNLLT 734 (1140)
T ss_pred CeEEEEEec--CccCcchHHHH-hhccHhhhhccceeeEEEEe----ecccccccHHHHHHH-HhhcceEEEEcCCchhe
Confidence 688888764 44555433333 2222223333332 33333 345667788888888 68899999999999887
Q ss_pred HHHHhccc
Q 002979 642 LSEWLAPC 649 (861)
Q Consensus 642 l~~~~~~~ 649 (861)
.-...+++
T Consensus 735 aisVakeC 742 (1140)
T KOG0208|consen 735 AISVAKEC 742 (1140)
T ss_pred eeehhhcc
Confidence 76666543
No 296
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=84.23 E-value=7.4 Score=44.19 Aligned_cols=97 Identities=14% Similarity=0.103 Sum_probs=57.0
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcc----cC
Q 002979 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSP----SL 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~----~l 488 (861)
+.+.+.+++. .++..||++|. +-|.| +..|+++++.| +|+.-..+-.+ .+
T Consensus 277 v~~~~~~p~~---~ll~~~~~~I~---hgG~~-t~~Eal~~G~P-------------------~v~~p~~~dq~~~a~~l 330 (392)
T TIGR01426 277 VEVRQWVPQL---EILKKADAFIT---HGGMN-STMEALFNGVP-------------------MVAVPQGADQPMTARRI 330 (392)
T ss_pred eEEeCCCCHH---HHHhhCCEEEE---CCCch-HHHHHHHhCCC-------------------EEecCCcccHHHHHHHH
Confidence 3556677765 56788998885 44766 66999999554 44432222111 11
Q ss_pred ---CCceEeC--CCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC-CHhHHH
Q 002979 489 ---SGAIRVN--PWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH-DVAYWA 537 (861)
Q Consensus 489 ---~~ai~vn--P~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~-~~~~W~ 537 (861)
..++.++ ..+.++++++|.++|..+ +.+.+.+++.+.+... .....+
T Consensus 331 ~~~g~g~~l~~~~~~~~~l~~ai~~~l~~~--~~~~~~~~l~~~~~~~~~~~~aa 383 (392)
T TIGR01426 331 AELGLGRHLPPEEVTAEKLREAVLAVLSDP--RYAERLRKMRAEIREAGGARRAA 383 (392)
T ss_pred HHCCCEEEeccccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHHHHcCCHHHHH
Confidence 2245554 346799999999999743 3444444444444433 334443
No 297
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=84.06 E-value=1.6 Score=43.04 Aligned_cols=60 Identities=17% Similarity=0.120 Sum_probs=44.3
Q ss_pred hccceEEEecCCccccCCCCCC------C--------------------------CCCHHHHHHHHHhhcCCCCeEEEEC
Q 002979 588 KTERRAIFLDYDGTVVPETSII------K--------------------------SPGPEVISVLKTLCSDPNNTVFIVS 635 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~------~--------------------------~~s~~~~~~L~~L~~~~g~~v~I~T 635 (861)
+.++..+++|+|.||++..... . .+-|.+.+.|++++ ++..++|+|
T Consensus 3 ~~~kl~LVLDLDeTLihs~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~~v~~rPgv~efL~~l~--~~yel~I~T 80 (156)
T TIGR02250 3 REKKLHLVLDLDQTLIHTTKDPTLSEWEKYDIEEPNSETRRDLRKFNLGTMWYLTKLRPFLHEFLKEAS--KLYEMHVYT 80 (156)
T ss_pred cCCceEEEEeCCCCcccccccCccchhhhcccccCCccccccceEEEcCCeEEEEEECCCHHHHHHHHH--hhcEEEEEe
Confidence 3567889999999999843210 0 01357788999883 558999999
Q ss_pred CCChhhHHHHhccc
Q 002979 636 GRGRSSLSEWLAPC 649 (861)
Q Consensus 636 GR~~~~l~~~~~~~ 649 (861)
..+...+..+++.+
T Consensus 81 ~~~~~yA~~vl~~l 94 (156)
T TIGR02250 81 MGTRAYAQAIAKLI 94 (156)
T ss_pred CCcHHHHHHHHHHh
Confidence 99999888887654
No 298
>PF13579 Glyco_trans_4_4: Glycosyl transferase 4-like domain; PDB: 3C4Q_B 3C4V_A 3C48_B 1Z2T_A.
Probab=84.04 E-value=1.1 Score=42.78 Aligned_cols=67 Identities=18% Similarity=0.154 Sum_probs=39.3
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHH-----HHhhcCCEEeecChHhHHHHHH
Q 002979 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEIL-----RGLLNCDLIGFHTFDYARHFLS 271 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il-----~~ll~~dligF~t~~~~~~Fl~ 271 (861)
|+|++|+++..++..+++++ .++++.+.+|-.+.... .++...++ ..+-.||.|-..+...++.+.+
T Consensus 75 Dvv~~~~~~~~~~~~~~~~~-~~~p~v~~~h~~~~~~~----~~~~~~~~~~~~~~~~~~ad~vi~~S~~~~~~l~~ 146 (160)
T PF13579_consen 75 DVVHAHSPTAGLVAALARRR-RGIPLVVTVHGTLFRRG----SRWKRRLYRWLERRLLRRADRVIVVSEAMRRYLRR 146 (160)
T ss_dssp SEEEEEHHHHHHHHHHHHHH-HT--EEEE-SS-T----------HHHHHHHHHHHHHHHH-SEEEESSHHHHHHHHH
T ss_pred eEEEecccchhHHHHHHHHc-cCCcEEEEECCCchhhc----cchhhHHHHHHHHHHHhcCCEEEECCHHHHHHHHH
Confidence 99999999877777777734 37999999997543221 12222222 3445688888888777766654
No 299
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=83.71 E-value=1.9 Score=42.84 Aligned_cols=56 Identities=20% Similarity=0.216 Sum_probs=34.7
Q ss_pred ceEEEecCCccccCCCCCCCC---------------------CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 591 RRAIFLDYDGTVVPETSIIKS---------------------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~---------------------~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
++.+++|+|+||+........ .-|.+.+.|+.+. + ...++|.|.-+...+..++..
T Consensus 1 k~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~-~-~yei~I~Ts~~~~yA~~il~~ 77 (162)
T TIGR02251 1 KKTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVS-K-WYELVIFTASLEEYADPVLDI 77 (162)
T ss_pred CcEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHH-h-cCEEEEEcCCcHHHHHHHHHH
Confidence 357999999999984221100 1245566777762 3 267777777666666666543
No 300
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=81.10 E-value=2.2 Score=41.59 Aligned_cols=37 Identities=24% Similarity=0.364 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+..+.+.+++.+ |+++++++.|||+..|+.+.+.+|.
T Consensus 135 ~~~~~~~~~~~~---~~~p~~~~~vgD~~~d~~~A~~~G~ 171 (176)
T PF13419_consen 135 DPDAYRRALEKL---GIPPEEILFVGDSPSDVEAAKEAGI 171 (176)
T ss_dssp SHHHHHHHHHHH---TSSGGGEEEEESSHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHc---CCCcceEEEEeCCHHHHHHHHHcCC
Confidence 568999999999 9999999999999999999999997
No 301
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=80.25 E-value=1.1 Score=45.71 Aligned_cols=28 Identities=29% Similarity=0.534 Sum_probs=19.9
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEECCCChh
Q 002979 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRS 640 (861)
Q Consensus 612 ~s~~~~~~L~~L~~~~g~~v~I~TGR~~~ 640 (861)
|-+.+.++|++| .+.|..++++|+|+..
T Consensus 74 p~~gA~e~l~~L-~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 74 PIPGAVEALKKL-RDKGHEIVIITARPPE 101 (191)
T ss_dssp B-TTHHHHHHHH-HTSTTEEEEEEE-SSS
T ss_pred ccHHHHHHHHHH-HHcCCcEEEEEecCcc
Confidence 446778889998 5778778888887654
No 302
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=79.65 E-value=1.7 Score=46.95 Aligned_cols=38 Identities=13% Similarity=0.214 Sum_probs=30.6
Q ss_pred CCCHHHHHH-HHHHHhhcCC--CCCCeEEEEeCCcchHHHHHHc
Q 002979 755 GVSKGLVAE-KVLVRMFNGG--RPPDFVMCVGDDRSDEDMFESI 795 (861)
Q Consensus 755 gvsKg~al~-~ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~a 795 (861)
..+|...+. ..++.+ + .++++|+++||+.||+.|...+
T Consensus 190 ~~~K~~~v~~~~~~~~---~~~~~~~~vI~vGDs~~Dl~ma~g~ 230 (277)
T TIGR01544 190 TFNKNHDVALRNTEYF---NQLKDRSNIILLGDSQGDLRMADGV 230 (277)
T ss_pred ccccHHHHHHHHHHHh---CccCCcceEEEECcChhhhhHhcCC
Confidence 357877666 467777 6 7899999999999999997666
No 303
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=79.55 E-value=12 Score=41.39 Aligned_cols=140 Identities=19% Similarity=0.147 Sum_probs=84.4
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002979 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv 413 (861)
+..|+==..=|++-+....|+++.+... .+. .++ .|- +.+...+++.++|.+.+.++ ||.. .+.
T Consensus 185 ~ltILvGNSgd~sNnHieaL~~L~~~~~--~~~----kIi---vPL-sYg~~n~~Yi~~V~~~~~~l---F~~~---~~~ 248 (360)
T PF07429_consen 185 KLTILVGNSGDPSNNHIEALEALKQQFG--DDV----KII---VPL-SYGANNQAYIQQVIQAGKEL---FGAE---NFQ 248 (360)
T ss_pred ceEEEEcCCCCCCccHHHHHHHHHHhcC--CCe----EEE---EEC-CCCCchHHHHHHHHHHHHHh---cCcc---cee
Confidence 3333333456777777766666654321 222 222 221 23333466777777666554 4432 355
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccc-cCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CCc
Q 002979 414 LIDRPVPRFEKSAYYAVAECCIVNAVR-DGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SGA 491 (861)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~-EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~a 491 (861)
.+...+|.+|+.++++.+|+.++...| .|||-..+ .+.+ |.++++|+-.-....+ +.+
T Consensus 249 iL~e~mpf~eYl~lL~~cDl~if~~~RQQgiGnI~l-Ll~~-------------------G~~v~L~~~np~~~~l~~~~ 308 (360)
T PF07429_consen 249 ILTEFMPFDEYLALLSRCDLGIFNHNRQQGIGNICL-LLQL-------------------GKKVFLSRDNPFWQDLKEQG 308 (360)
T ss_pred EhhhhCCHHHHHHHHHhCCEEEEeechhhhHhHHHH-HHHc-------------------CCeEEEecCChHHHHHHhCC
Confidence 678899999999999999999999875 78886542 1222 5678999888777777 334
Q ss_pred eEe----CCCCHHHHHHHHHHH
Q 002979 492 IRV----NPWDIDAVADAMTLA 509 (861)
Q Consensus 492 i~v----nP~d~~~~A~ai~~a 509 (861)
+.| +.-|...+++|=+++
T Consensus 309 ipVlf~~d~L~~~~v~ea~rql 330 (360)
T PF07429_consen 309 IPVLFYGDELDEALVREAQRQL 330 (360)
T ss_pred CeEEeccccCCHHHHHHHHHHH
Confidence 433 344445555544433
No 304
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=79.40 E-value=1.2e+02 Score=34.34 Aligned_cols=147 Identities=14% Similarity=0.088 Sum_probs=80.8
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002979 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
+++.||-+|-=--.+.+...+......+.+ ++.+++++.+. . +.+++....+ .+...+
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~------~~~v~~~~G~~----~-~~~~~~~~~~-----------~~~~~v 239 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN------RIQVIHQTGKN----D-LEELKSAYNE-----------LGVVRV 239 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh------CeEEEEEcCcc----h-HHHHHHHHhh-----------cCcEEE
Confidence 566666665544444455555444433332 45577776432 2 3343333221 221112
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCC--cccC--
Q 002979 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGC--SPSL-- 488 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~--~~~l-- 488 (861)
..| .+++.++|++||++|.=| | +++..|..+++.| .|+=-+... ..+.
T Consensus 240 ~~f-----~~dm~~~~~~ADLvIsRa---G-a~Ti~E~~a~g~P-------------------~IliP~p~~~~~~Q~~N 291 (357)
T COG0707 240 LPF-----IDDMAALLAAADLVISRA---G-ALTIAELLALGVP-------------------AILVPYPPGADGHQEYN 291 (357)
T ss_pred eeH-----HhhHHHHHHhccEEEeCC---c-ccHHHHHHHhCCC-------------------EEEeCCCCCccchHHHH
Confidence 222 346999999999988644 2 4688899999655 333333322 1221
Q ss_pred -------CCceEeCCCC--HHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC
Q 002979 489 -------SGAIRVNPWD--IDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH 531 (861)
Q Consensus 489 -------~~ai~vnP~d--~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~ 531 (861)
..|+.+.-++ .+.+++.|.++++. .|+..++....+.+..-
T Consensus 292 A~~l~~~gaa~~i~~~~lt~~~l~~~i~~l~~~--~~~l~~m~~~a~~~~~p 341 (357)
T COG0707 292 AKFLEKAGAALVIRQSELTPEKLAELILRLLSN--PEKLKAMAENAKKLGKP 341 (357)
T ss_pred HHHHHhCCCEEEeccccCCHHHHHHHHHHHhcC--HHHHHHHHHHHHhcCCC
Confidence 2366666555 78999999999973 45555555544444443
No 305
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=78.09 E-value=2.9 Score=41.50 Aligned_cols=37 Identities=14% Similarity=0.117 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |++++++++|||+..|+.+.+.+|.
T Consensus 142 ~~~~~~~~~~~~---~~~~~~~~~vgD~~~di~aA~~~G~ 178 (183)
T TIGR01509 142 DPDIYLLALKKL---GLKPEECLFVDDSPAGIEAAKAAGM 178 (183)
T ss_pred CHHHHHHHHHHc---CCCcceEEEEcCCHHHHHHHHHcCC
Confidence 467889999999 9999999999999999999999986
No 306
>KOG0204 consensus Calcium transporting ATPase [Inorganic ion transport and metabolism]
Probab=76.21 E-value=13 Score=45.35 Aligned_cols=39 Identities=21% Similarity=0.347 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccc
Q 002979 610 KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPC 649 (861)
Q Consensus 610 ~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~ 649 (861)
.+.-|.+.++++. |+..|++|-.+||-.....+.+..+|
T Consensus 646 DPvRPgV~~AV~~-Cq~AGItVRMVTGDNI~TAkAIA~eC 684 (1034)
T KOG0204|consen 646 DPVRPGVPEAVQL-CQRAGITVRMVTGDNINTAKAIAREC 684 (1034)
T ss_pred CCCCCCcHHHHHH-HHHcCcEEEEEeCCcHHHHHHHHHHc
Confidence 3456899999998 59999999999999999999998654
No 307
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=75.91 E-value=3.3 Score=42.32 Aligned_cols=37 Identities=11% Similarity=0.101 Sum_probs=34.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+....+.+++++ |++++++++|||+..|+..-+.+|.
T Consensus 143 ~p~~~~~~~~~~---~~~p~~~l~vgD~~~di~aA~~aG~ 179 (199)
T PRK09456 143 EARIYQHVLQAE---GFSAADAVFFDDNADNIEAANALGI 179 (199)
T ss_pred CHHHHHHHHHHc---CCChhHeEEeCCCHHHHHHHHHcCC
Confidence 688889999999 9999999999999999999999987
No 308
>COG0816 Predicted endonuclease involved in recombination (possible Holliday junction resolvase in Mycoplasmas and B. subtilis) [DNA replication, recombination, and repair]
Probab=75.21 E-value=16 Score=35.41 Aligned_cols=72 Identities=21% Similarity=0.230 Sum_probs=54.5
Q ss_pred HHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhc
Q 002979 352 KLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVA 431 (861)
Q Consensus 352 ~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~A 431 (861)
-+.+...+++++ +++.|.||.|-.-++..+. ..+.+++.++++..+|+ .||++.+...+..+-...+..+
T Consensus 41 ~~~~l~~li~~~-----~~~~vVVGlP~~m~g~~~~-~~~~~~~f~~~L~~r~~----lpv~l~DERltTv~A~~~L~~~ 110 (141)
T COG0816 41 DFNALLKLVKEY-----QVDTVVVGLPLNMDGTEGP-RAELARKFAERLKKRFN----LPVVLWDERLSTVEAERMLIEA 110 (141)
T ss_pred hHHHHHHHHHHh-----CCCEEEEecCcCCCCCcch-hHHHHHHHHHHHHHhcC----CCEEEEcCccCHHHHHHHHHHc
Confidence 445555566655 3668889999877777766 67788999999999997 4899999998888777766665
Q ss_pred cc
Q 002979 432 EC 433 (861)
Q Consensus 432 Dv 433 (861)
++
T Consensus 111 ~~ 112 (141)
T COG0816 111 GV 112 (141)
T ss_pred CC
Confidence 43
No 309
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=74.92 E-value=9.9 Score=41.22 Aligned_cols=93 Identities=12% Similarity=0.112 Sum_probs=57.6
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002979 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
.+++++..|-.|+.+.....++|+..+ .++++ +..|.++.. +.++++++.+ +. . . .+
T Consensus 170 ~~~iLi~~GG~d~~~~~~~~l~~l~~~---~~~~~----i~vv~G~~~---~~~~~l~~~~----~~----~--~---~i 226 (279)
T TIGR03590 170 LRRVLVSFGGADPDNLTLKLLSALAES---QINIS----ITLVTGSSN---PNLDELKKFA----KE----Y--P---NI 226 (279)
T ss_pred cCeEEEEeCCcCCcCHHHHHHHHHhcc---ccCce----EEEEECCCC---cCHHHHHHHH----Hh----C--C---CE
Confidence 367999999999988666777777653 23333 333333321 2333443332 21 1 1 12
Q ss_pred EEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002979 413 VLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
. +.+. .+++..+++.||++|.+ -|.+.+|+++|+.|
T Consensus 227 ~-~~~~--~~~m~~lm~~aDl~Is~-----~G~T~~E~~a~g~P 262 (279)
T TIGR03590 227 I-LFID--VENMAELMNEADLAIGA-----AGSTSWERCCLGLP 262 (279)
T ss_pred E-EEeC--HHHHHHHHHHCCEEEEC-----CchHHHHHHHcCCC
Confidence 2 3333 56899999999999874 35799999999655
No 310
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=74.67 E-value=4.3 Score=40.55 Aligned_cols=38 Identities=21% Similarity=0.170 Sum_probs=31.3
Q ss_pred cCCCCHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHccc
Q 002979 753 PQGVSKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 753 p~gvsKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
+-|.+|+..++.+.+ +++.++++|||.+|++..+....
T Consensus 143 ~fG~dK~~vI~~l~e-------~~e~~fy~GDsvsDlsaaklsDl 180 (220)
T COG4359 143 QFGHDKSSVIHELSE-------PNESIFYCGDSVSDLSAAKLSDL 180 (220)
T ss_pred ccCCCcchhHHHhhc-------CCceEEEecCCcccccHhhhhhh
Confidence 457889999998865 45679999999999998887765
No 311
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=74.26 E-value=5.2 Score=39.63 Aligned_cols=68 Identities=21% Similarity=0.240 Sum_probs=48.2
Q ss_pred CCHHHHHHHHHhccceEEEecCCccccCCCC------------------------------CCCCCCHHHHHHHHHhhcC
Q 002979 577 LSIDHIVSAYRKTERRAIFLDYDGTVVPETS------------------------------IIKSPGPEVISVLKTLCSD 626 (861)
Q Consensus 577 l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~------------------------------~~~~~s~~~~~~L~~L~~~ 626 (861)
.++++|.......+.-.+-||+|.|++-..+ ..-.++.+...-|-.+-+.
T Consensus 49 iSvaqI~~SLeG~~Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~ 128 (237)
T COG3700 49 ISVAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQR 128 (237)
T ss_pred EEHHHHHhhhcCCCCeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHh
Confidence 5678888888777777899999999996321 0123555655555555578
Q ss_pred CCCeEEEECCCChhhHHH
Q 002979 627 PNNTVFIVSGRGRSSLSE 644 (861)
Q Consensus 627 ~g~~v~I~TGR~~~~l~~ 644 (861)
.|-.++++|||+....+.
T Consensus 129 RGD~i~FvTGRt~gk~d~ 146 (237)
T COG3700 129 RGDAIYFVTGRTPGKTDT 146 (237)
T ss_pred cCCeEEEEecCCCCcccc
Confidence 899999999998765443
No 312
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=73.40 E-value=16 Score=40.43 Aligned_cols=35 Identities=14% Similarity=0.185 Sum_probs=26.2
Q ss_pred CCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002979 419 VPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
-+..=+.+++..||.++||. |..+++ .||++++.+
T Consensus 217 ~~~nPy~~~La~ad~i~VT~--DSvSMv-sEA~~tG~p 251 (311)
T PF06258_consen 217 TGENPYLGFLAAADAIVVTE--DSVSMV-SEAAATGKP 251 (311)
T ss_pred CCCCcHHHHHHhCCEEEEcC--ccHHHH-HHHHHcCCC
Confidence 34445889999999999997 677765 588887543
No 313
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=71.98 E-value=8.1 Score=40.39 Aligned_cols=38 Identities=16% Similarity=0.175 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
+.....++++++ |++++++++|||+..|+...+.+|..
T Consensus 154 ~p~~y~~i~~~l---gv~p~e~lfVgDs~~Di~AA~~AG~~ 191 (220)
T TIGR01691 154 EAQSYVKIAGQL---GSPPREILFLSDIINELDAARKAGLH 191 (220)
T ss_pred CHHHHHHHHHHh---CcChhHEEEEeCCHHHHHHHHHcCCE
Confidence 678899999999 99999999999999999999999973
No 314
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=71.18 E-value=1.4 Score=43.71 Aligned_cols=34 Identities=29% Similarity=0.283 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHH
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFES 794 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ 794 (861)
.....+.+++++ |++++++++|||+..|+...+.
T Consensus 141 ~p~~f~~~~~~~---~~~p~~~l~vgD~~~Di~~A~~ 174 (175)
T TIGR01493 141 DPVVYELVFDTV---GLPPDRVLMVAAHQWDLIGARK 174 (175)
T ss_pred CHHHHHHHHHHH---CCCHHHeEeEecChhhHHHHhc
Confidence 467778899999 9999999999999999887654
No 315
>KOG2914 consensus Predicted haloacid-halidohydrolase and related hydrolases [General function prediction only]
Probab=70.63 E-value=11 Score=39.47 Aligned_cols=65 Identities=23% Similarity=0.251 Sum_probs=41.5
Q ss_pred HHHHHHHHhcCCCEEEEEcCeEEEEecCCCCHHHHHHHHHHHhhcCCCCC-CeEEEEeCCcchHHHHHHccc
Q 002979 727 LLDHLESVLANEPAVVKRGQHIVEVKPQGVSKGLVAEKVLVRMFNGGRPP-DFVMCVGDDRSDEDMFESILS 797 (861)
Q Consensus 727 l~~~L~~~l~~~~~~v~~g~~~vEI~p~gvsKg~al~~ll~~l~~~gi~~-d~vlaiGD~~ND~~Mf~~ag~ 797 (861)
....++..+......+. |.. -||.+ |-.........++.+ |.++ +.+++|.|+.+=+.+..++|.
T Consensus 125 k~~~~~~~~~~f~~~v~-~d~-~~v~~-gKP~Pdi~l~A~~~l---~~~~~~k~lVfeds~~Gv~aa~aagm 190 (222)
T KOG2914|consen 125 KISRHEDIFKNFSHVVL-GDD-PEVKN-GKPDPDIYLKAAKRL---GVPPPSKCLVFEDSPVGVQAAKAAGM 190 (222)
T ss_pred HHHHhhHHHHhcCCCee-cCC-ccccC-CCCCchHHHHHHHhc---CCCCccceEEECCCHHHHHHHHhcCC
Confidence 44455545544443344 221 23333 223445556666666 7777 999999999999999999997
No 316
>KOG0203 consensus Na+/K+ ATPase, alpha subunit [Inorganic ion transport and metabolism]
Probab=70.14 E-value=18 Score=44.33 Aligned_cols=40 Identities=18% Similarity=0.282 Sum_probs=29.9
Q ss_pred CHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEe
Q 002979 613 GPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAA 656 (861)
Q Consensus 613 s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lglia 656 (861)
...+=++..+ |+..|+.|+.+||+.+...+.+.. ..|++.
T Consensus 592 R~~vP~Av~~-CrsAGIkvimVTgdhpiTAkAiA~---~vgIi~ 631 (1019)
T KOG0203|consen 592 RAAVPDAVGK-CRSAGIKVIMVTGDHPITAKAIAK---SVGIIS 631 (1019)
T ss_pred cccCchhhhh-hhhhCceEEEEecCccchhhhhhh---heeeec
Confidence 3334445555 588999999999999999998884 456554
No 317
>KOG2116 consensus Protein involved in plasmid maintenance/nuclear protein involved in lipid metabolism [Cell motility; Lipid transport and metabolism]
Probab=69.83 E-value=6 Score=46.71 Aligned_cols=77 Identities=18% Similarity=0.229 Sum_probs=52.3
Q ss_pred cceEEEecCCccccCCCC-------CCCCC-CHHHHHHHHHhhcCCCCeEEEECCCChhh---HHHHhccccCCceEecC
Q 002979 590 ERRAIFLDYDGTVVPETS-------IIKSP-GPEVISVLKTLCSDPNNTVFIVSGRGRSS---LSEWLAPCEMLGIAAEH 658 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~-------~~~~~-s~~~~~~L~~L~~~~g~~v~I~TGR~~~~---l~~~~~~~~~lgliaen 658 (861)
..|+|+.|+|||++.... ..+.- ..-+.+...+. .+.|.+++.+|.|.... .+.++..+.+.|-+.-.
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~I-k~NGYk~lyLSARaIgQA~~TR~yL~nv~QdG~~LPd 607 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKI-KENGYKILYLSARAIGQADSTRQYLKNVEQDGKKLPD 607 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHH-HhCCeeEEEEehhhhhhhHHHHHHHHHHhhcCccCCC
Confidence 468999999999997211 01222 24455666676 78999999999998753 34555555667776667
Q ss_pred cEEEEeCCc
Q 002979 659 GYFIRWNKT 667 (861)
Q Consensus 659 G~~i~~~~~ 667 (861)
|-+|..+.+
T Consensus 608 GPViLSPd~ 616 (738)
T KOG2116|consen 608 GPVILSPDS 616 (738)
T ss_pred CCEEeCCCc
Confidence 777766543
No 318
>COG4996 Predicted phosphatase [General function prediction only]
Probab=68.89 E-value=10 Score=35.85 Aligned_cols=55 Identities=24% Similarity=0.175 Sum_probs=38.8
Q ss_pred eEEEecCCccccCCCCC--CC-------------------CCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002979 592 RAIFLDYDGTVVPETSI--IK-------------------SPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~--~~-------------------~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
++|+||.||||.+.... -+ .+-+.+++.|+.+ ++.|..+..+|=.....+-+.++
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~wa-rnsG~i~~~~sWN~~~kA~~aLr 76 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWA-RNSGYILGLASWNFEDKAIKALR 76 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHH-HhCCcEEEEeecCchHHHHHHHH
Confidence 57999999999985421 00 1237778888887 78888888888776665555553
No 319
>KOG2884 consensus 26S proteasome regulatory complex, subunit RPN10/PSMD4 [Posttranslational modification, protein turnover, chaperones]
Probab=68.74 E-value=62 Score=33.37 Aligned_cols=47 Identities=28% Similarity=0.367 Sum_probs=28.6
Q ss_pred ceEEeccCCCCcccCCC-----ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHh
Q 002979 474 SMLVVSEFIGCSPSLSG-----AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKH 524 (861)
Q Consensus 474 g~lV~Se~~G~~~~l~~-----ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~ 524 (861)
+|++.-|-+|+.--+.+ .+-|+|.+--++|.||+--+ +|.+.|.++.
T Consensus 186 sPii~ge~g~a~~~~~a~g~~f~fgvdp~~DPELAlALRlSM----EEer~rQe~a 237 (259)
T KOG2884|consen 186 SPIIQGEDGGAAAGLGANGMDFEFGVDPEDDPELALALRLSM----EEERARQERA 237 (259)
T ss_pred CceeccCcccccccccccccccccCCCcccCHHHHHHHHhhH----HHHHHHHHHH
Confidence 45555554444433321 46789999999999887543 4555555543
No 320
>KOG2134 consensus Polynucleotide kinase 3' phosphatase [Replication, recombination and repair]
Probab=68.14 E-value=4 Score=45.34 Aligned_cols=46 Identities=37% Similarity=0.474 Sum_probs=35.8
Q ss_pred cceEEEecCCccccCCCCC---------CCCCCHHHHHHHHHhhcCCCCeEEEECC
Q 002979 590 ERRAIFLDYDGTVVPETSI---------IKSPGPEVISVLKTLCSDPNNTVFIVSG 636 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~---------~~~~s~~~~~~L~~L~~~~g~~v~I~TG 636 (861)
..|++.|||||||++..+. ...+.++.-.-|+.+ .++|+.++|.|-
T Consensus 74 ~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl-~~~g~~l~iftn 128 (422)
T KOG2134|consen 74 GSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTL-YQDGIKLFIFTN 128 (422)
T ss_pred CcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhh-ccCCeEEEEEec
Confidence 4689999999999985541 122457777889999 799999999884
No 321
>KOG3742 consensus Glycogen synthase [Carbohydrate transport and metabolism]
Probab=67.88 E-value=1e+02 Score=35.25 Aligned_cols=70 Identities=11% Similarity=0.084 Sum_probs=49.0
Q ss_pred HHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC----CC----ceE-
Q 002979 423 EKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL----SG----AIR- 493 (861)
Q Consensus 423 el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l----~~----ai~- 493 (861)
+.-.+-+.|.+-|+||.+|..|-+|.|..+.+-| -|.+..+|.-.-+ .. ||.
T Consensus 493 DYeeFVRGCHLGVFPSYYEPWGYTPAECTVMGiP-------------------SvtTNlSGFGcfMeehi~d~~ayGIYI 553 (692)
T KOG3742|consen 493 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIP-------------------SVTTNLSGFGCFMEEHIEDPQAYGIYI 553 (692)
T ss_pred CHHHHhccccccccccccCCCCCCchheEEeccc-------------------cccccccchhhhHHHHhcCchhceEEE
Confidence 4567788999999999999999999999998444 4666666654333 11 333
Q ss_pred eC------CCCHHHHHHHHHHHhc
Q 002979 494 VN------PWDIDAVADAMTLAIN 511 (861)
Q Consensus 494 vn------P~d~~~~A~ai~~aL~ 511 (861)
|+ -.+++++++-|..-..
T Consensus 554 vDRRfks~deSv~qL~~~m~~F~~ 577 (692)
T KOG3742|consen 554 VDRRFKSPDESVQQLASFMYEFCK 577 (692)
T ss_pred EecccCChhhHHHHHHHHHHHHHH
Confidence 32 2345777777777665
No 322
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=64.52 E-value=5.5 Score=41.60 Aligned_cols=53 Identities=23% Similarity=0.428 Sum_probs=39.5
Q ss_pred hccceEEEecCCccccCCCC-------CC----------------CCCCHHHHHHHHHhhcCCCCeEEEECCCChhh
Q 002979 588 KTERRAIFLDYDGTVVPETS-------II----------------KSPGPEVISVLKTLCSDPNNTVFIVSGRGRSS 641 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~-------~~----------------~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~ 641 (861)
+.+.+.|++|+|-|+++-.. .. .++-+-..+.|+-. ...|..|+.+|-|..+.
T Consensus 76 k~K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yv-n~~Gg~ifyiSNR~~~~ 151 (274)
T COG2503 76 KGKKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYV-NSNGGKIFYISNRDQEN 151 (274)
T ss_pred cCCCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHH-HhcCcEEEEEeccchhc
Confidence 44567999999999998322 11 12446667788876 68899999999998876
No 323
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=62.51 E-value=35 Score=33.88 Aligned_cols=97 Identities=22% Similarity=0.242 Sum_probs=59.5
Q ss_pred CCceEeeccceeEeeeccCCccchhccHHHHHHHHHHHhcCCC-EEEEEcCe------------EEEEecCCCCHHHHHH
Q 002979 697 DGSNIEIKESALVWHHQDADPDFGSCQAKELLDHLESVLANEP-AVVKRGQH------------IVEVKPQGVSKGLVAE 763 (861)
Q Consensus 697 ~gs~ie~k~~~l~~~~~~~d~~~~~~~a~el~~~L~~~l~~~~-~~v~~g~~------------~vEI~p~gvsKg~al~ 763 (861)
-|..+.-.++-+.|.-.+..| |+.+.+.+.-.... +.+.+++. .--|...+--=+.+++
T Consensus 29 kgvi~DlDNTLv~wd~~~~tp--------e~~~W~~e~k~~gi~v~vvSNn~e~RV~~~~~~l~v~fi~~A~KP~~~~fr 100 (175)
T COG2179 29 KGVILDLDNTLVPWDNPDATP--------ELRAWLAELKEAGIKVVVVSNNKESRVARAAEKLGVPFIYRAKKPFGRAFR 100 (175)
T ss_pred cEEEEeccCceecccCCCCCH--------HHHHHHHHHHhcCCEEEEEeCCCHHHHHhhhhhcCCceeecccCccHHHHH
Confidence 345555556666676555544 55555554433322 44444431 1112333333478999
Q ss_pred HHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCC
Q 002979 764 KVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGR 817 (861)
Q Consensus 764 ~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~ 817 (861)
+.++++ ++++++|+++||. .+|+---..+|. +++-|-.
T Consensus 101 ~Al~~m---~l~~~~vvmVGDqL~TDVlggnr~G~-------------~tIlV~P 139 (175)
T COG2179 101 RALKEM---NLPPEEVVMVGDQLFTDVLGGNRAGM-------------RTILVEP 139 (175)
T ss_pred HHHHHc---CCChhHEEEEcchhhhhhhcccccCc-------------EEEEEEE
Confidence 999999 9999999999998 488765555554 6777765
No 324
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=61.28 E-value=6.9 Score=38.73 Aligned_cols=24 Identities=29% Similarity=0.404 Sum_probs=17.2
Q ss_pred EEEecCCccccCCCCCCCCCCHHHHHHHHHh
Q 002979 593 AIFLDYDGTVVPETSIIKSPGPEVISVLKTL 623 (861)
Q Consensus 593 lI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L 623 (861)
+|+||+||||++ .. +...++++.+
T Consensus 1 ~viFD~DGTL~D---~~----~~~~~~~~~~ 24 (175)
T TIGR01493 1 AMVFDVYGTLVD---VH----GGVRACLAAI 24 (175)
T ss_pred CeEEecCCcCcc---cH----HHHHHHHHHh
Confidence 489999999999 22 3455566665
No 325
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=58.99 E-value=8.9 Score=43.16 Aligned_cols=68 Identities=13% Similarity=0.210 Sum_probs=41.4
Q ss_pred hccceEEEecCCccccCCCCCCCC-----------CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCceEe
Q 002979 588 KTERRAIFLDYDGTVVPETSIIKS-----------PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGIAA 656 (861)
Q Consensus 588 ~s~~klI~~DlDGTLl~~~~~~~~-----------~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lglia 656 (861)
+...++|++|+|||++. ++.. -+..+.....+. ...|..|.-.|.|+.-.+..-.. -+..++
T Consensus 372 r~n~kiVVsDiDGTITk---SD~~Ghv~~miGkdwth~gVAkLYtdI-~rNGYkI~YltsR~~Gqa~sTrs---ylrnie 444 (580)
T COG5083 372 RNNKKIVVSDIDGTITK---SDALGHVKQMIGKDWTHNGVAKLYTDI-DRNGYKIKYLTSRSYGQADSTRS---YLRNIE 444 (580)
T ss_pred eCCCcEEEEecCCcEEe---hhhHHHHHHHhccchhhcchhhhhhhh-ccCceEEEEEecccccchhhhhh---HHHhhh
Confidence 35678999999999998 3221 123334444555 45778888888888765543321 233455
Q ss_pred cCcEEE
Q 002979 657 EHGYFI 662 (861)
Q Consensus 657 enG~~i 662 (861)
+||+.+
T Consensus 445 QngykL 450 (580)
T COG5083 445 QNGYKL 450 (580)
T ss_pred hcCccC
Confidence 555443
No 326
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=58.83 E-value=7.4 Score=36.80 Aligned_cols=48 Identities=21% Similarity=0.122 Sum_probs=41.1
Q ss_pred EEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhc
Q 002979 594 IFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLA 647 (861)
Q Consensus 594 I~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~ 647 (861)
...++++|+.. ...+-+++.+.|++| .+- +.|+|+||-.+.++.+...
T Consensus 17 ~~~~v~~tiat----gGklf~ev~e~iqeL-~d~-V~i~IASgDr~gsl~~lae 64 (152)
T COG4087 17 KAGKVLYTIAT----GGKLFSEVSETIQEL-HDM-VDIYIASGDRKGSLVQLAE 64 (152)
T ss_pred ecceEEEEEcc----CcEEcHhhHHHHHHH-HHh-heEEEecCCcchHHHHHHH
Confidence 45688999987 667888999999999 576 9999999999999998873
No 327
>KOG2882 consensus p-Nitrophenyl phosphatase [Inorganic ion transport and metabolism]
Probab=58.50 E-value=8.6 Score=41.55 Aligned_cols=60 Identities=18% Similarity=0.292 Sum_probs=44.9
Q ss_pred cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhccccCCce
Q 002979 590 ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAPCEMLGI 654 (861)
Q Consensus 590 ~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~~~~lgl 654 (861)
+.-.++||-||.|.. ...+-|-+.++|+.| +..|-.++++|-.+..+.+.+++.+..+|+
T Consensus 21 ~~DtfifDcDGVlW~----g~~~ipGs~e~l~~L-~~~gK~i~fvTNNStksr~~y~kK~~~lG~ 80 (306)
T KOG2882|consen 21 SFDTFIFDCDGVLWL----GEKPIPGSPEALNLL-KSLGKQIIFVTNNSTKSREQYMKKFAKLGF 80 (306)
T ss_pred hcCEEEEcCCcceee----cCCCCCChHHHHHHH-HHcCCcEEEEeCCCcchHHHHHHHHHHhCc
Confidence 456899999999997 344556677777777 566789999998888877777765555554
No 328
>PRK14986 glycogen phosphorylase; Provisional
Probab=58.16 E-value=1.6e+02 Score=36.72 Aligned_cols=136 Identities=13% Similarity=0.014 Sum_probs=86.3
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002979 333 GKKLILGIDDMDIFKGISL-KLLAMEQLL--QQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~Af~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
+-..++.+-|+..-|--.+ .|..++++. ..+|+.. ..+++|..|-..-++ ..-.++-+.|.++++-||..=...+
T Consensus 542 ~sLfd~qakR~heYKRq~LNil~~i~ry~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIk~I~~va~~in~Dp~v~~ 620 (815)
T PRK14986 542 KALFDVQIKRIHEYKRQLMNVLHVITRYNRIKADPDAKWVPRVNIFAGKAASAY-YMAKHIIHLINDVAKVINNDPQIGD 620 (815)
T ss_pred ccceeeeehhhhhhhhhhHHHhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhccChhhcC
Confidence 3457788999998888777 777766663 4566532 246677666544333 2335677888888998886433334
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC
Q 002979 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (861)
Q Consensus 409 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (861)
.-.|+++. ...-.--..++.+|||..-+|. .++|| |++++-+ -++ .|+|-+|..-|.-.++
T Consensus 621 ~lkVVFle-nY~vslAe~lipg~Dv~eqis~------ag~EA--SGTsnMK--~al--------NGaLtlgtlDG~nvEi 681 (815)
T PRK14986 621 KLKVVFIP-NYSVSLAQLIIPAADLSEQISL------AGTEA--SGTSNMK--FAL--------NGALTIGTLDGANVEM 681 (815)
T ss_pred ceeEEEeC-CCCHHHHHHhhhhhhhhhhCCC------CCccc--cCcchhh--HHh--------cCceeeeccCCchhHH
Confidence 44566665 4455555578999999888775 56663 4333211 111 4778888888876555
No 329
>KOG1618 consensus Predicted phosphatase [General function prediction only]
Probab=57.41 E-value=8.7 Score=41.69 Aligned_cols=39 Identities=21% Similarity=0.344 Sum_probs=31.3
Q ss_pred eEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCC----CCeEEEEC
Q 002979 592 RAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDP----NNTVFIVS 635 (861)
Q Consensus 592 klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~----g~~v~I~T 635 (861)
--|+||+||.|+- .+.+-+...++|+.|. +. ++.+++.|
T Consensus 36 fgfafDIDGVL~R----G~~~i~~~~~Alr~L~-~~~g~lkIP~vfLT 78 (389)
T KOG1618|consen 36 FGFAFDIDGVLFR----GHRPIPGALKALRRLV-DNQGQLKIPFVFLT 78 (389)
T ss_pred eeEEEecccEEEe----cCCCCcchHHHHHHHH-hcCCCeeccEEEEe
Confidence 4799999999998 5567788899999994 55 56777777
No 330
>COG1168 MalY Bifunctional PLP-dependent enzyme with beta-cystathionase and maltose regulon repressor activities [Amino acid transport and metabolism]
Probab=54.40 E-value=1.8e+02 Score=32.72 Aligned_cols=160 Identities=15% Similarity=0.090 Sum_probs=89.6
Q ss_pred cEEEEEEecCCC--CChhHHHHHHHHHHHHHHHHhhccC-CCCcccEEEEc-CCCCHHHHHHHHHhcccceecccccCCC
Q 002979 369 KVVLVQIVNPAR--GSGKDVQEAKKETYLTAKRINEVYG-SPNYEPVVLID-RPVPRFEKSAYYAVAECCIVNAVRDGMN 444 (861)
Q Consensus 369 ~vvLvqi~~p~r--~~~~~~~~~~~~v~~l~~~IN~~~~-~~~~~pvv~~~-~~v~~~el~aly~~ADv~vvtS~~EG~n 444 (861)
++.|++.++|-. |+....+|| .++.++|.+-|-+-= ..=+.|.++.. .+++..-+..-+ +--++.++|-.-+||
T Consensus 158 ~vkl~iLCnPHNP~Grvwt~eeL-~~i~elc~kh~v~VISDEIHaDlv~~g~~h~~~a~ls~~~-a~~~it~~saSKtFN 235 (388)
T COG1168 158 RVKLFILCNPHNPTGRVWTKEEL-RKIAELCLRHGVRVISDEIHADLVLGGHKHIPFASLSERF-ADNSITLTSASKTFN 235 (388)
T ss_pred CccEEEEeCCCCCCCccccHHHH-HHHHHHHHHcCCEEEeecccccccccCCCccchhhcChhh-hcceEEEeecccccc
Confidence 356888888854 444444444 345667766554432 23466666665 567766665544 334556777788888
Q ss_pred CcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCCCceEeCCCCHHHHHHHHHHHh-cCCHHHHHHHHHH
Q 002979 445 LVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLSGAIRVNPWDIDAVADAMTLAI-NMRDSEKQLRHEK 523 (861)
Q Consensus 445 Lv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~~ai~vnP~d~~~~A~ai~~aL-~m~~~e~~~r~~~ 523 (861)
|.-+..-. .|+=|+..-+.+.+.|.+.. ..+..--...++.
T Consensus 236 laGL~~a~--------------------------------------~Ii~n~~lr~~~~~~l~~~~~~~~n~lg~~A~~a 277 (388)
T COG1168 236 LAGLKCAY--------------------------------------IIISNRELRAKFLKRLKRNGLHGPSALGIIATEA 277 (388)
T ss_pred chhhhhee--------------------------------------EEecCHHHHHHHHHHHHHhcCCCCchHHHHHHHH
Confidence 87655333 23334433344555555322 2233322333444
Q ss_pred hhhhhccCCHhHHHHHHHHHHHHHHHhhccccccccCCCcceeeeccCcccccCCHHHHHHHHHhccceEEEecCCcccc
Q 002979 524 HYRYVSTHDVAYWARSFAQDLERACRDHYSKRCWGIGLGLGFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVV 603 (861)
Q Consensus 524 ~~~~v~~~~~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl 603 (861)
.| +.-..|.+..++-|+.- .+.+.+...+...++-+..-|||-+
T Consensus 278 AY-----~~G~~WLd~L~~yl~~N-------------------------------~~~~~~~l~~~~P~v~v~~p~gTYL 321 (388)
T COG1168 278 AY-----NQGEPWLDELLEYLKDN-------------------------------RDYVADFLNKHLPGVKVTEPQGTYL 321 (388)
T ss_pred HH-----HhchHHHHHHHHHHHHH-------------------------------HHHHHHHHHhhCCCcEEecCCCcee
Confidence 44 34567777766666542 2334445555566788889999977
Q ss_pred C
Q 002979 604 P 604 (861)
Q Consensus 604 ~ 604 (861)
-
T Consensus 322 ~ 322 (388)
T COG1168 322 A 322 (388)
T ss_pred e
Confidence 4
No 331
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=52.59 E-value=1e+02 Score=30.84 Aligned_cols=49 Identities=20% Similarity=0.208 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHHHHHHc----CCCCCEEEEeCcccccHHHHHHhhcCCCeEEEEE
Q 002979 177 WQAYVSANKIFADKVMEVI----NPDDDCVWVHDYHLMVLPTFLRKRFNRIKLGFFL 229 (861)
Q Consensus 177 w~~Y~~vN~~fa~~v~~~~----~p~~D~VwvhDyhl~llp~~lr~~~~~~~i~~fl 229 (861)
|+.=..-=+..|+.+.+.- .| |+|.-| +-+.=+-||++-+|++++.-++
T Consensus 43 ~e~~~~rg~av~~a~~~L~~~Gf~P--DvI~~H--~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 43 FEAAVLRGQAVARAARQLRAQGFVP--DVIIAH--PGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCCC--CEEEEc--CCcchhhhHHHhCCCCcEEEEE
Confidence 4443444444445444433 45 999999 9999999999999999987554
No 332
>PRK04128 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=51.61 E-value=37 Score=35.72 Aligned_cols=61 Identities=18% Similarity=0.271 Sum_probs=42.7
Q ss_pred CHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC-CChhhHHHHh
Q 002979 578 SIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG-RGRSSLSEWL 646 (861)
Q Consensus 578 ~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG-R~~~~l~~~~ 646 (861)
+...+++.|...-..+++.|+|||+... +...+.++++++..+.+|.+.-| |+.+.+++++
T Consensus 31 dp~~~a~~~~~~~~~l~ivDldga~~g~--------~~n~~~i~~i~~~~~~pv~~gGGIrs~edv~~l~ 92 (228)
T PRK04128 31 DPVEIALRFSEYVDKIHVVDLDGAFEGK--------PKNLDVVKNIIRETGLKVQVGGGLRTYESIKDAY 92 (228)
T ss_pred CHHHHHHHHHHhCCEEEEEECcchhcCC--------cchHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHH
Confidence 6677888888764569999999999762 22355666665444555554444 7888998887
No 333
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=51.44 E-value=5.3 Score=40.68 Aligned_cols=35 Identities=17% Similarity=0.216 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcc
Q 002979 759 GLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag 796 (861)
...+..+++.+ +.++..|+++||+.||..|++.||
T Consensus 181 ~k~~~~~i~~l---~~~~~~v~~vGDg~nD~~al~~Ag 215 (215)
T PF00702_consen 181 PKIFLRIIKEL---QVKPGEVAMVGDGVNDAPALKAAG 215 (215)
T ss_dssp HHHHHHHHHHH---TCTGGGEEEEESSGGHHHHHHHSS
T ss_pred chhHHHHHHHH---hcCCCEEEEEccCHHHHHHHHhCc
Confidence 34668888888 888899999999999999999985
No 334
>KOG3085 consensus Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=51.15 E-value=15 Score=38.64 Aligned_cols=47 Identities=19% Similarity=0.187 Sum_probs=38.5
Q ss_pred HHHHHHHHHHhhcCCCCCCeEEEEeCC-cchHHHHHHccccCCCCCCCCCCceEEEEeCCCCcc
Q 002979 759 GLVAEKVLVRMFNGGRPPDFVMCVGDD-RSDEDMFESILSTVSGPSLPVPPEIFACTVGRKPSK 821 (861)
Q Consensus 759 g~al~~ll~~l~~~gi~~d~vlaiGD~-~ND~~Mf~~ag~~~~~~~~~~~~~~~av~vG~~~s~ 821 (861)
...-+..++++ |+.|++|+.|||+ .||+.-.+.+|.. +.-|.+..+.
T Consensus 171 p~If~~al~~l---~v~Pee~vhIgD~l~nD~~gA~~~G~~-------------ailv~~~~~~ 218 (237)
T KOG3085|consen 171 PRIFQLALERL---GVKPEECVHIGDLLENDYEGARNLGWH-------------AILVDNSITA 218 (237)
T ss_pred hHHHHHHHHHh---CCChHHeEEecCccccccHhHHHcCCE-------------EEEEccccch
Confidence 45677888888 9999999999998 5999999999973 6777765433
No 335
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=50.32 E-value=19 Score=42.36 Aligned_cols=34 Identities=18% Similarity=0.177 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 758 KGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 758 Kg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
|...++ +.+ |.+... ++.||+.||.+||+.++..
T Consensus 177 Kv~rl~---~~~---g~~~~~-~aYgDS~sD~plL~~a~e~ 210 (497)
T PLN02177 177 KRDAVL---KEF---GDALPD-LGLGDRETDHDFMSICKEG 210 (497)
T ss_pred HHHHHH---HHh---CCCCce-EEEECCccHHHHHHhCCcc
Confidence 666665 444 544444 8999999999999999973
No 336
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=50.19 E-value=6.6 Score=38.90 Aligned_cols=12 Identities=50% Similarity=0.858 Sum_probs=11.0
Q ss_pred EEEecCCccccC
Q 002979 593 AIFLDYDGTVVP 604 (861)
Q Consensus 593 lI~~DlDGTLl~ 604 (861)
.++||+||||++
T Consensus 1 ~vlFDlDgtLv~ 12 (183)
T TIGR01509 1 AILFDLDGVLVD 12 (183)
T ss_pred CeeeccCCceec
Confidence 379999999999
No 337
>PF00343 Phosphorylase: Carbohydrate phosphorylase; InterPro: IPR000811 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 35 GT35 from CAZY comprises enzymes with only one known activity; glycogen and starch phosphorylase (2.4.1.1 from EC). The main role of glycogen phosphorylase (GPase) is to provide phosphorylated glucose molecules (G-1-P) []. GPase is a highly regulated allosteric enzyme. The net effect of the regulatory site allows the enzyme to operate at a variety of rates; the enzyme is not simply regulated as "on" or "off", but rather it can be thought of being set to operate at an ideal rate based on changing conditions at in the cell. The most important allosteric effector is the phosphate molecule covalently attached to Ser14. This switches GPase from the b (inactive) state to the a (active) state. Upon phosphorylation, GPase attains about 80% of its Vmax. When the enzyme is not phosphorylated, GPase activity is practically non-existent at low AMP levels. There is some apparent controversy as to the structure of GPase. All sources agree that the enzyme is multimeric, but there is apparent controversy as to the enzyme being a tetramer or a dimer. Apparently, GPase (in the a form) forms tetramers in the crystal form. The consensus seems to be that `regardless of the a or b form, GPase functions as a dimer in vivo []. The GPase monomer is best described as consisting of two domains, an N-terminal domain and a C-terminal domain []. The C-terminal domain is often referred to as the catalytic domain. It consists of a beta-sheet core surrounded by layers of helical segments []. The vitamin cofactor pyridoxal phosphate (PLP) is covalently attached to the amino acid backbone. The N-terminal domain also consists of a central beta-sheet core and is surrounded by layers of helical segments. The N-terminal domain contains different allosteric effector sites to regulate the enzyme. Bacterial phosphorylases follow the same catalytic mechanisms as their plant and animal counterparts, but differ considerably in terms of their substrate specificity and regulation. The catalytic domains are highly conserved while the regulatory sites are only poorly conserved. For maltodextrin phosphorylase from Escherichia coli the physiological role of the enzyme in the utilisation of maltidextrins is known in detail; that of all the other bacterial phosphorylases is still unclear. Roles in regulatuon of endogenous glycogen metabolism in periods of starvation, and sporulation, stress response or quick adaptation to changing environments are possible [].; GO: 0004645 phosphorylase activity, 0005975 carbohydrate metabolic process; PDB: 1YGP_B 2AW3_B 2AV6_B 1AHP_B 1QM5_A 1L5W_A 2ECP_A 2ASV_A 1L5V_B 1E4O_B ....
Probab=49.43 E-value=2e+02 Score=35.46 Aligned_cols=135 Identities=14% Similarity=0.091 Sum_probs=73.6
Q ss_pred CCeEEEeecCcccccCHHHH-HH---HHHHHHHhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCC
Q 002979 333 GKKLILGIDDMDIFKGISLK-LL---AMEQLLQQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSP 407 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~-l~---Af~~ll~~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~ 407 (861)
+-..++.+-|+..-|--.+. |. -+.++ ++.|+.. ..+++|..|-..-++ ..-.++-+.|.++++.||..-.-.
T Consensus 443 ~slfdv~~rR~heYKRq~LniL~ii~~y~ri-k~~p~~~~~Pv~~IFaGKAhP~d-~~gK~iIk~I~~va~~in~Dp~v~ 520 (713)
T PF00343_consen 443 DSLFDVQARRFHEYKRQLLNILHIIDRYNRI-KNNPNKKIRPVQFIFAGKAHPGD-YMGKEIIKLINNVAEVINNDPEVG 520 (713)
T ss_dssp TSEEEEEES-SCCCCTHHHHHHHHHHHHHHH-HHSTTSCCS-EEEEEE----TT--HHHHHHHHHHHHHHHHHCT-TTTC
T ss_pred chhhhhhhhhcccccccCcccccHHHHHHHH-HhcccCCCCCeEEEEeccCCCCc-HHHHHHHHHHHHHHHHHhcChhhc
Confidence 45677899999999976663 33 33443 4466533 246666555433222 223567777888888888643323
Q ss_pred CcccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCccc
Q 002979 408 NYEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS 487 (861)
Q Consensus 408 ~~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~ 487 (861)
+.-.|+|+. ..+-.--..++.+|||-.-+|. .++|| |++.+ |.-++ .|+|.+|..-|+--+
T Consensus 521 ~~lkVvFle-nYdvslA~~lipg~DVwln~p~------~p~EA--SGTSg--MK~~~--------NGaL~lstlDG~niE 581 (713)
T PF00343_consen 521 DRLKVVFLE-NYDVSLAEKLIPGVDVWLNIPT------RPKEA--SGTSG--MKAAM--------NGALNLSTLDGWNIE 581 (713)
T ss_dssp CGEEEEEET-T-SHHHHHHHGGG-SEEEE---------TTSSS--S-SHH--HHHHH--------TT-EEEEESSTCHHH
T ss_pred cceeEEeec-CCcHHHHHHHhhhhhhhhhCCC------CCccc--cCCCc--chhhc--------CCCeEEecccchhHH
Confidence 333566655 5566666688999999999986 45553 32221 11111 477888888887655
Q ss_pred C
Q 002979 488 L 488 (861)
Q Consensus 488 l 488 (861)
+
T Consensus 582 i 582 (713)
T PF00343_consen 582 I 582 (713)
T ss_dssp H
T ss_pred H
Confidence 5
No 338
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=48.29 E-value=2.6e+02 Score=30.24 Aligned_cols=82 Identities=15% Similarity=0.122 Sum_probs=49.9
Q ss_pred CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002979 332 DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 332 ~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
.++++++++|..+.. ..+++ ++..|+++ ++.+|.+. . + . + ...
T Consensus 191 ~~~~iLv~~gg~~~~----~~~~~----l~~~~~~~----~~v~g~~~-~---~---~-------------~-----~~n 233 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG----DLIEA----LKALPDYQ----FIVFGPNA-A---D---P-------------R-----PGN 233 (318)
T ss_pred CCCEEEEEeCCCcHH----HHHHH----HHhCCCCe----EEEEcCCc-c---c---c-------------c-----CCC
Confidence 467899999998776 33333 34457665 55555321 0 0 0 0 012
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
+. +. .....++..++..||++|-.+ |+| +..|+++++.|
T Consensus 234 i~-~~-~~~~~~~~~~m~~ad~vIs~~---G~~-t~~Ea~~~g~P 272 (318)
T PF13528_consen 234 IH-VR-PFSTPDFAELMAAADLVISKG---GYT-TISEALALGKP 272 (318)
T ss_pred EE-Ee-ecChHHHHHHHHhCCEEEECC---CHH-HHHHHHHcCCC
Confidence 22 22 234578899999999988765 666 35799999655
No 339
>cd04300 GT1_Glycogen_Phosphorylase This is a family of oligosaccharide phosphorylases. It includes yeast and mammalian glycogen phosphorylases, plant starch/glucan phosphorylase, as well as the maltodextrin phosphorylases of bacteria. The members of this family catalyze the breakdown of oligosaccharides into glucose-1-phosphate units. They are important allosteric enzymes in carbohydrate metabolism. The allosteric control mechanisms of yeast and mammalian members of this family are different from that of bacterial members. The members of this family belong to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=46.81 E-value=3.3e+02 Score=34.08 Aligned_cols=136 Identities=12% Similarity=0.013 Sum_probs=85.3
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHH--HhCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002979 333 GKKLILGIDDMDIFKGISL-KLLAMEQLL--QQHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~Af~~ll--~~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
+-..++.|-|+..-|--.+ .|.-++++. ..+|+.. ..+++|..|-.+-++. .-.++-+.|.++++.||..=.-.+
T Consensus 529 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y~-~aK~iIklI~~va~~in~Dp~v~~ 607 (797)
T cd04300 529 DSLFDVQVKRIHEYKRQLLNVLHIIHLYNRIKENPNADIVPRTFIFGGKAAPGYY-MAKLIIKLINAVADVVNNDPDVGD 607 (797)
T ss_pred CccEEEEeeechhhhhhhhHHHhhHHHHHHHHhCCCcCCCCeEEEEeccCCCCcH-HHHHHHHHHHHHHHHhccChhcCC
Confidence 4567889999999997777 666655553 3456522 2466666665443332 335677888888999987543344
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC
Q 002979 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (861)
Q Consensus 409 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (861)
+-.|+++. ...-.--..++.+|||-.-+|+ .++|| |++++-+ -++ .|+|.+|..-|+-.++
T Consensus 608 ~lkVVFle-nY~VslAe~iipaaDvseqis~------ag~EA--SGTsnMK--~~l--------NGaltlgtlDGanvEi 668 (797)
T cd04300 608 KLKVVFLP-NYNVSLAEKIIPAADLSEQIST------AGKEA--SGTGNMK--FML--------NGALTIGTLDGANVEI 668 (797)
T ss_pred ceEEEEeC-CCChHHHHHhhhhhhhhhhCCC------CCccc--cCCchhh--HHh--------cCceeeecccchhHHH
Confidence 44577665 3444445578899999877775 56664 4333221 111 4777888777766555
No 340
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=46.30 E-value=47 Score=39.21 Aligned_cols=100 Identities=18% Similarity=0.153 Sum_probs=71.8
Q ss_pred eEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEE
Q 002979 335 KLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVL 414 (861)
Q Consensus 335 ~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~ 414 (861)
.|.++..+ ++|=.++.+.-.-++|+.-|+-. |++.+.+ +-++..+.+++++++- | .+.. ...
T Consensus 431 vVf~c~~n--~~K~~pev~~~wmqIL~~vP~Sv----l~L~~~~------~~~~~~~~l~~la~~~----G-v~~e-RL~ 492 (620)
T COG3914 431 VVFCCFNN--YFKITPEVFALWMQILSAVPNSV----LLLKAGG------DDAEINARLRDLAERE----G-VDSE-RLR 492 (620)
T ss_pred EEEEecCC--cccCCHHHHHHHHHHHHhCCCcE----EEEecCC------CcHHHHHHHHHHHHHc----C-CChh-hee
Confidence 34444554 57778899999999999999864 6666643 2356677777776653 2 2332 345
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeee
Q 002979 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVC 453 (861)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac 453 (861)
|..+.+.++-.+.|..||+++-|=-+-| ..++.|++..
T Consensus 493 f~p~~~~~~h~a~~~iADlvLDTyPY~g-~TTa~daLwm 530 (620)
T COG3914 493 FLPPAPNEDHRARYGIADLVLDTYPYGG-HTTASDALWM 530 (620)
T ss_pred ecCCCCCHHHHHhhchhheeeecccCCC-ccchHHHHHh
Confidence 6668889999999999999998877655 4678888887
No 341
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=46.22 E-value=4.7e+02 Score=29.34 Aligned_cols=86 Identities=8% Similarity=-0.067 Sum_probs=50.3
Q ss_pred eEEEeecCcc-cccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEE
Q 002979 335 KLILGIDDMD-IFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVV 413 (861)
Q Consensus 335 ~vil~Vdrld-~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv 413 (861)
..++.=+|-. ..+-++..++|.+++.+++ .++++.+.++ .+.+++.+ . + +.++.
T Consensus 170 I~llPGSR~~Ei~~llP~~~~aa~~L~~~~------~~~~i~~a~~------~~~i~~~~----~----~-----~~~~~ 224 (347)
T PRK14089 170 IAFMPGSRKSEIKRLMPIFKELAKKLEGKE------KILVVPSFFK------GKDLKEIY----G----D-----ISEFE 224 (347)
T ss_pred EEEECCCCHHHHHHHHHHHHHHHHHHhhcC------cEEEEeCCCc------HHHHHHHH----h----c-----CCCcE
Confidence 3455666753 4455566778887776543 3355554322 12222211 1 1 11333
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecC
Q 002979 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQG 456 (861)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~ 456 (861)
++. +...+|+.||+++..| |.+.+|++.++.|
T Consensus 225 ~~~------~~~~~m~~aDlal~~S-----GT~TLE~al~g~P 256 (347)
T PRK14089 225 ISY------DTHKALLEAEFAFICS-----GTATLEAALIGTP 256 (347)
T ss_pred Eec------cHHHHHHhhhHHHhcC-----cHHHHHHHHhCCC
Confidence 332 3457899999999999 7888899999665
No 342
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=45.81 E-value=10 Score=38.59 Aligned_cols=13 Identities=15% Similarity=0.268 Sum_probs=12.0
Q ss_pred eEEEecCCccccC
Q 002979 592 RAIFLDYDGTVVP 604 (861)
Q Consensus 592 klI~~DlDGTLl~ 604 (861)
++|+||+||||++
T Consensus 1 ~~viFDldgvL~d 13 (199)
T PRK09456 1 MLYIFDLGNVIVD 13 (199)
T ss_pred CEEEEeCCCcccc
Confidence 4799999999999
No 343
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=43.23 E-value=11 Score=37.75 Aligned_cols=36 Identities=25% Similarity=0.372 Sum_probs=28.2
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHH
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFE 793 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~ 793 (861)
+|..+++.+...... +.+.+.++++||+.||++|++
T Consensus 157 ~K~~~l~~~~~~~~~-~~~~~~~~~iGDs~~D~~~lr 192 (192)
T PF12710_consen 157 GKAEALKELYIRDEE-DIDPDRVIAIGDSINDLPMLR 192 (192)
T ss_dssp HHHHHHHHHHHHHHH-THTCCEEEEEESSGGGHHHHH
T ss_pred cHHHHHHHHHHHhhc-CCCCCeEEEEECCHHHHHHhC
Confidence 699999999221111 456889999999999999996
No 344
>TIGR00250 RNAse_H_YqgF RNAse H-fold protein YqgF. This protein family, which exhibits an RNAse H fold in crystal structure, has been proposed as a putative Holliday junction resolvase, an alternate to RuvC.
Probab=42.61 E-value=1.3e+02 Score=28.61 Aligned_cols=71 Identities=20% Similarity=0.239 Sum_probs=52.3
Q ss_pred HHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHh
Q 002979 351 LKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAV 430 (861)
Q Consensus 351 ~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~ 430 (861)
..+..+..+.+++. +..+.||.|-..+|.. .+....+.+.++++..+|+ .||.+++...+..+-...|..
T Consensus 35 ~~~~~l~~~i~~~~-----~~~iVvGlP~~~dG~~-~~~a~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~ 104 (130)
T TIGR00250 35 PDWSRIEELLKEWT-----PDKIVVGLPLNMDGTE-GPLTERAQKFANRLEGRFG----VPVVLWDERLSTVEAESGLFA 104 (130)
T ss_pred HHHHHHHHHHHHcC-----CCEEEEeccCCCCcCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHH
Confidence 44567777777764 3367899898766655 4566777888888887774 389999999888888777765
Q ss_pred c
Q 002979 431 A 431 (861)
Q Consensus 431 A 431 (861)
+
T Consensus 105 ~ 105 (130)
T TIGR00250 105 R 105 (130)
T ss_pred c
Confidence 3
No 345
>PRK00109 Holliday junction resolvase-like protein; Reviewed
Probab=42.30 E-value=2.1e+02 Score=27.50 Aligned_cols=70 Identities=20% Similarity=0.248 Sum_probs=49.6
Q ss_pred HHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHHhcc
Q 002979 353 LLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYAVAE 432 (861)
Q Consensus 353 l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~~AD 432 (861)
+..+..+.++++ +..+.||.|...+|.. .+....+.+.++++..+++ .||++++...+..+-...|..+.
T Consensus 43 ~~~l~~~i~~~~-----i~~iVvGlP~~~~G~~-~~~~~~v~~f~~~L~~~~~----~~v~~~DEr~TT~~A~~~l~~~~ 112 (138)
T PRK00109 43 WDRLEKLIKEWQ-----PDGLVVGLPLNMDGTE-GPRTERARKFANRLEGRFG----LPVVLVDERLSTVEAERALADVG 112 (138)
T ss_pred HHHHHHHHHHhC-----CCEEEEeccCCCCCCc-CHHHHHHHHHHHHHHHHhC----CCEEEEcCCcCHHHHHHHHHHcC
Confidence 556666666653 4478899997666554 4556677777888877763 38999999998888877776543
No 346
>PF13477 Glyco_trans_4_2: Glycosyl transferase 4-like
Probab=42.07 E-value=35 Score=31.97 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=29.1
Q ss_pred HHHHHHcCCCCCEEEEeCccc-ccHHHHHHhhcCCCeEEEEEe
Q 002979 189 DKVMEVINPDDDCVWVHDYHL-MVLPTFLRKRFNRIKLGFFLH 230 (861)
Q Consensus 189 ~~v~~~~~p~~D~VwvhDyhl-~llp~~lr~~~~~~~i~~flH 230 (861)
.++++..+| |+|++|...- .+++.++.+.....|+.+..|
T Consensus 67 ~k~ik~~~~--DvIh~h~~~~~~~~~~l~~~~~~~~~~i~~~h 107 (139)
T PF13477_consen 67 RKIIKKEKP--DVIHCHTPSPYGLFAMLAKKLLKNKKVIYTVH 107 (139)
T ss_pred HHHhccCCC--CEEEEecCChHHHHHHHHHHHcCCCCEEEEec
Confidence 456666677 9999999875 455666655444489999999
No 347
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=41.80 E-value=64 Score=29.27 Aligned_cols=35 Identities=17% Similarity=0.245 Sum_probs=26.5
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHH
Q 002979 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQE 388 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~ 388 (861)
..|...++++++.+|+.+ +|.||.....|..-|.+
T Consensus 49 ~~K~~~i~~i~~~fP~~k----fiLIGDsgq~DpeiY~~ 83 (100)
T PF09949_consen 49 EHKRDNIERILRDFPERK----FILIGDSGQHDPEIYAE 83 (100)
T ss_pred hHHHHHHHHHHHHCCCCc----EEEEeeCCCcCHHHHHH
Confidence 588899999999999988 88899655544333433
No 348
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=40.66 E-value=29 Score=33.26 Aligned_cols=55 Identities=16% Similarity=0.187 Sum_probs=37.2
Q ss_pred ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCC--ChhhHHHHhccc
Q 002979 591 RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGR--GRSSLSEWLAPC 649 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR--~~~~l~~~~~~~ 649 (861)
.-+-++||||.|+.-.|...--..++++.+.+ .|..|+|+|-- .++.++++...+
T Consensus 43 tgiAildL~G~~l~l~S~R~~~~~evi~~I~~----~G~PviVAtDV~p~P~~V~Kia~~f 99 (138)
T PF04312_consen 43 TGIAILDLDGELLDLKSSRNMSRSEVIEWISE----YGKPVIVATDVSPPPETVKKIARSF 99 (138)
T ss_pred eEEEEEecCCcEEEEEeecCCCHHHHHHHHHH----cCCEEEEEecCCCCcHHHHHHHHHh
Confidence 45788999999998553333333555555554 59999999964 556777776443
No 349
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=39.41 E-value=1.4e+02 Score=34.40 Aligned_cols=100 Identities=14% Similarity=0.136 Sum_probs=60.8
Q ss_pred EEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCccc------
Q 002979 414 LIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPS------ 487 (861)
Q Consensus 414 ~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~------ 487 (861)
+....+|+.+ ++..||++|-. -|+|.+ .|++..+.| +|+ = ..+.++
T Consensus 287 ~v~~~~p~~~---~l~~ad~vI~h---GG~gtt-~eaL~~gvP-------------------~vv-~-P~~~DQ~~nA~r 338 (406)
T COG1819 287 IVADYVPQLE---LLPRADAVIHH---GGAGTT-SEALYAGVP-------------------LVV-I-PDGADQPLNAER 338 (406)
T ss_pred EEecCCCHHH---HhhhcCEEEec---CCcchH-HHHHHcCCC-------------------EEE-e-cCCcchhHHHHH
Confidence 4555677666 67799998854 588854 588887443 222 1 111222
Q ss_pred ---CCCc--eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccCCHhHHHHHHHHH
Q 002979 488 ---LSGA--IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTHDVAYWARSFAQD 543 (861)
Q Consensus 488 ---l~~a--i~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~~~~~W~~~fl~~ 543 (861)
+.-| +...+++.+.++++++++|+.+ .-+.+.+++.+....++...=+...+.+
T Consensus 339 ve~~G~G~~l~~~~l~~~~l~~av~~vL~~~--~~~~~~~~~~~~~~~~~g~~~~a~~le~ 397 (406)
T COG1819 339 VEELGAGIALPFEELTEERLRAAVNEVLADD--SYRRAAERLAEEFKEEDGPAKAADLLEE 397 (406)
T ss_pred HHHcCCceecCcccCCHHHHHHHHHHHhcCH--HHHHHHHHHHHHhhhcccHHHHHHHHHH
Confidence 2224 4455899999999999999843 3344455566666666654434444333
No 350
>PRK05632 phosphate acetyltransferase; Reviewed
Probab=39.03 E-value=1.1e+02 Score=37.72 Aligned_cols=179 Identities=12% Similarity=0.045 Sum_probs=102.6
Q ss_pred EcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC------
Q 002979 415 IDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL------ 488 (861)
Q Consensus 415 ~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l------ 488 (861)
+.+..+.+....+++.-+++++|.-|+-.=+.++|+-..+ + +-+.+|++...-.++.+
T Consensus 230 ~vgAm~~~~~~~~l~~~~lVIt~gdR~Di~l~al~~~~~~-~---------------~~a~lIlTgg~~~~~~v~~l~~~ 293 (684)
T PRK05632 230 TVCARSIPNMLEHLKPGSLVVTPGDRSDVILAALLAAMNG-P---------------PIAGLLLTGGYEPDPRIAKLCEG 293 (684)
T ss_pred EEEecchHHHHHhccCCcEEEeCCChHHHHHHHHHhcccC-C---------------CceEEEEcCCCCCCHHHHHHHhh
Confidence 3455677788888887777777777776666666652111 0 11236665433333322
Q ss_pred ---CC-ceEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhccC-CHhHHHHHHHHHHHHHHHhhccccccccCCCc
Q 002979 489 ---SG-AIRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVSTH-DVAYWARSFAQDLERACRDHYSKRCWGIGLGL 563 (861)
Q Consensus 489 ---~~-ai~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~~~-~~~~W~~~fl~~l~~~~~~~~~~~~~~~g~g~ 563 (861)
.+ .++.-|+|.-++|..|.++..--..+-..+-++..+++.+| |..+|.+. +. ...
T Consensus 294 a~~~~ipVl~t~~dT~~ta~~i~~~~~~i~~~d~~ki~~~~~~~~~~vD~~~l~~~-l~----~~~-------------- 354 (684)
T PRK05632 294 AFETGLPVLSVDTNTYQTALRLQSFNGEVPVDDHERIETVLELVASHVDTDELLER-LT----ATS-------------- 354 (684)
T ss_pred cccCCCCEEEecCCHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHhCCHHHHHHH-hc----cCC--------------
Confidence 12 46778999999999999775421111123345666677777 77777664 22 000
Q ss_pred ceeeeccCcccccCCHHHHHHHHHhccceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECCCChhhHH
Q 002979 564 GFRVLSLSPSFRRLSIDHIVSAYRKTERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSGRGRSSLS 643 (861)
Q Consensus 564 ~~~~~~~~~~f~~l~~~~~~~~y~~s~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~ 643 (861)
.|...++|. .-...+.+.-+..++|+++-. . -.++++++...+ .+.|+--.+.-|+.. .++
T Consensus 355 -~~~~~~~p~---~~~~~l~~~a~~~~~~i~~~e------------~-~d~~~l~Aa~~~-~~~g~~~~iLvG~~~-~I~ 415 (684)
T PRK05632 355 -ERSRRLSPP---AFRYQLTERARAAKKRIVLPE------------G-DEPRTLKAAAIC-LERGIADCVLLGNPE-EIR 415 (684)
T ss_pred -CCCCCcCHH---HHHHHHHHHHhcCCCEEEEeC------------C-CCHHHHHHHHHH-HHcCCceEEEECCHH-HHH
Confidence 011223442 123466666666666666532 1 257888888876 677876666667764 455
Q ss_pred HHhc
Q 002979 644 EWLA 647 (861)
Q Consensus 644 ~~~~ 647 (861)
+.+.
T Consensus 416 ~~~~ 419 (684)
T PRK05632 416 RVAA 419 (684)
T ss_pred HHHH
Confidence 5543
No 351
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=36.89 E-value=2.7e+02 Score=30.78 Aligned_cols=124 Identities=16% Similarity=0.087 Sum_probs=75.9
Q ss_pred CeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEE-EecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccE
Q 002979 334 KKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQ-IVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPV 412 (861)
Q Consensus 334 ~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvq-i~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pv 412 (861)
+..|+==..=|++-.....|.++.+.+.. + +.++. .+.|+ + .+++.++|.+.+.++ ||.. .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie~L~~l~~~~~~--~----v~ii~PlsYp~-g----n~~Yi~~V~~~~~~l---F~~~---~~ 208 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIEALRALHQQFGD--N----VKIIVPMGYPA-N----NQAYIEEVRQAGLAL---FGAE---NF 208 (322)
T ss_pred ceEEEEeCCCCCcccHHHHHHHHHHHhCC--C----eEEEEECCcCC-C----CHHHHHHHHHHHHHh---cCcc---cE
Confidence 33343334567888888777777665432 2 22332 23222 1 155667777665543 5532 46
Q ss_pred EEEcCCCCHHHHHHHHHhcccceeccc-ccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC-CC
Q 002979 413 VLIDRPVPRFEKSAYYAVAECCIVNAV-RDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL-SG 490 (861)
Q Consensus 413 v~~~~~v~~~el~aly~~ADv~vvtS~-~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l-~~ 490 (861)
..+...++.+|..++++.+|+.++.-- ..|+|...+=. . -+.++++|+-.-.-..+ +.
T Consensus 209 ~~L~e~l~f~eYl~lL~~~Dl~~f~~~RQQgiGnl~lLi-~-------------------~G~~v~l~r~n~fwqdl~e~ 268 (322)
T PRK02797 209 QILTEKLPFDDYLALLRQCDLGYFIFARQQGIGTLCLLI-Q-------------------LGKPVVLSRDNPFWQDLTEQ 268 (322)
T ss_pred EehhhhCCHHHHHHHHHhCCEEEEeechhhHHhHHHHHH-H-------------------CCCcEEEecCCchHHHHHhC
Confidence 678899999999999999999988775 47887664321 1 14567777666555555 33
Q ss_pred ceEe
Q 002979 491 AIRV 494 (861)
Q Consensus 491 ai~v 494 (861)
++-|
T Consensus 269 gv~V 272 (322)
T PRK02797 269 GLPV 272 (322)
T ss_pred CCeE
Confidence 4433
No 352
>COG4641 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=34.44 E-value=89 Score=35.10 Aligned_cols=108 Identities=10% Similarity=0.116 Sum_probs=71.5
Q ss_pred CCHHHHHHHHHhcccceeccc---ccCC---CCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccCC-Cc
Q 002979 419 VPRFEKSAYYAVAECCIVNAV---RDGM---NLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSLS-GA 491 (861)
Q Consensus 419 v~~~el~aly~~ADv~vvtS~---~EG~---nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l~-~a 491 (861)
.+.......|+.-|+.+.=+. -+|. +.-..|+++| +|+++.+--.+.-.-+. |-
T Consensus 246 ~~~~~v~~~~~~~~~~~n~~r~~~~~~l~~~~~RvFeiagc-------------------~~~liT~~~~~~e~~f~pgk 306 (373)
T COG4641 246 NPKDGVPNAFKRDDVTLNINRASIANALFSPTNRVFEIAGC-------------------GGFLITDYWKDLEKFFKPGK 306 (373)
T ss_pred CccchhhhcccccceeeeecHHHHHhhcCCchhhHHHHhhc-------------------CCccccccHHHHHHhcCCch
Confidence 334677777777777654332 2333 7788999999 55566555554433332 22
Q ss_pred eEeCCCCHHHHHHHHHHHhcCCHHHHHHHHHHhhhhhc-cCCHhHHHHHHHHHHHH
Q 002979 492 IRVNPWDIDAVADAMTLAINMRDSEKQLRHEKHYRYVS-THDVAYWARSFAQDLER 546 (861)
Q Consensus 492 i~vnP~d~~~~A~ai~~aL~m~~~e~~~r~~~~~~~v~-~~~~~~W~~~fl~~l~~ 546 (861)
-.+--.|..++.+.|...+.-+ +||++..+..++.|. .|+...-+..++..+..
T Consensus 307 ~~iv~~d~kdl~~~~~yll~h~-~erkeiae~~ye~V~~~ht~~~r~~~~~~~i~s 361 (373)
T COG4641 307 DIIVYQDSKDLKEKLKYLLNHP-DERKEIAECAYERVLARHTYEERIFKLLNEIAS 361 (373)
T ss_pred heEEecCHHHHHHHHHHHhcCc-chHHHHHHhhHHHHHHhccHHHHHHHHHHHHHH
Confidence 2333568899999999999844 566677777777664 48888888777777765
No 353
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=34.39 E-value=3.5e+02 Score=32.04 Aligned_cols=78 Identities=9% Similarity=-0.031 Sum_probs=47.2
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCC---CCcccC
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFI---GCSPSL 488 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~---G~~~~l 488 (861)
-+++.+.+|+.++.+- ..+++|| .+-|+| ...||+.++.|. |++.-++ .-+.-+
T Consensus 347 Nv~i~~w~Pq~~lL~h-p~v~~fI---tHGG~~-s~~Eal~~GvP~------------------v~iP~~~DQ~~Na~rv 403 (507)
T PHA03392 347 NVLTQKWFPQRAVLKH-KNVKAFV---TQGGVQ-STDEAIDALVPM------------------VGLPMMGDQFYNTNKY 403 (507)
T ss_pred ceEEecCCCHHHHhcC-CCCCEEE---ecCCcc-cHHHHHHcCCCE------------------EECCCCccHHHHHHHH
Confidence 4566778888776542 4566666 356665 668999996552 2222211 111111
Q ss_pred ---CCceEeCC--CCHHHHHHHHHHHhcC
Q 002979 489 ---SGAIRVNP--WDIDAVADAMTLAINM 512 (861)
Q Consensus 489 ---~~ai~vnP--~d~~~~A~ai~~aL~m 512 (861)
+.|+.+++ .+.+++++||.++|+.
T Consensus 404 ~~~G~G~~l~~~~~t~~~l~~ai~~vl~~ 432 (507)
T PHA03392 404 VELGIGRALDTVTVSAAQLVLAIVDVIEN 432 (507)
T ss_pred HHcCcEEEeccCCcCHHHHHHHHHHHhCC
Confidence 22566654 5679999999999974
No 354
>PRK13587 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Provisional
Probab=33.26 E-value=1.1e+02 Score=32.38 Aligned_cols=61 Identities=16% Similarity=0.286 Sum_probs=44.9
Q ss_pred CHHHHHHHHHh-c-cceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC-CChhhHHHHh
Q 002979 578 SIDHIVSAYRK-T-ERRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG-RGRSSLSEWL 646 (861)
Q Consensus 578 ~~~~~~~~y~~-s-~~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG-R~~~~l~~~~ 646 (861)
+...+++.|.. . -..+.++|+||+.-. .+...+.++++++..+.++.+--| |+.+.+++++
T Consensus 32 dp~~~a~~~~~~~Ga~~l~ivDLd~a~~~--------~~~n~~~I~~i~~~~~~pi~vGGGIrs~e~v~~~l 95 (234)
T PRK13587 32 SAEESIAYYSQFECVNRIHIVDLIGAKAQ--------HAREFDYIKSLRRLTTKDIEVGGGIRTKSQIMDYF 95 (234)
T ss_pred CHHHHHHHHHhccCCCEEEEEECcccccC--------CcchHHHHHHHHhhcCCeEEEcCCcCCHHHHHHHH
Confidence 45668888888 3 378999999999755 234566777776655667666555 8888999888
No 355
>COG0058 GlgP Glucan phosphorylase [Carbohydrate transport and metabolism]
Probab=33.06 E-value=1e+03 Score=29.61 Aligned_cols=130 Identities=15% Similarity=0.060 Sum_probs=83.8
Q ss_pred CCeEEEeecCcccccCHHHHHHHHHHHHHhCC-CCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc
Q 002979 333 GKKLILGIDDMDIFKGISLKLLAMEQLLQQHP-GMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP 411 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P-~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p 411 (861)
+..+++.+-|+..-|-..+.++=.+++...-- ++..++++|..|-..-++ ..-.++.+.+...++.||.+- .
T Consensus 486 ~~lfd~~~kRiheYKRq~Lnl~~i~~ly~~i~~d~~prv~~iFaGKAhP~y-~~aK~iIk~I~~~a~~in~~l------k 558 (750)
T COG0058 486 NALFDGQARRIHEYKRQLLNLLDIERLYRILKEDWVPRVQIIFAGKAHPAD-YAAKEIIKLINDVADVINNKL------K 558 (750)
T ss_pred CcceeeeehhhhhhhhhHHhHhhHHHHHHHHhcCCCCceEEEEeccCCCcc-hHHHHHHHHHHHHHHhhcccc------e
Confidence 45688999999999977766666555554433 666677777655443333 223567778888888888722 4
Q ss_pred EEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC
Q 002979 412 VVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (861)
Q Consensus 412 vv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (861)
|+|+. ..+-.--..++.+|||-..+|+ .++|| |++++.+ -++ .|++-+|..-|+-.++
T Consensus 559 VvFl~-nYdvslA~~iipa~Dvweqis~------a~~EA--SGTsnMK--~al--------NGaltigtlDGanvEi 616 (750)
T COG0058 559 VVFLP-NYDVSLAELLIPAADVWEQIPT------AGKEA--SGTSNMK--AAL--------NGALTLGTLDGANVEI 616 (750)
T ss_pred EEEeC-CCChhHHHhhcccccccccCCC------CCccc--cCcCcch--HHh--------cCCceeeccccHHHHH
Confidence 66665 3333344467899999887775 56774 5444322 121 4778888888877665
No 356
>KOG4549 consensus Magnesium-dependent phosphatase [General function prediction only]
Probab=32.76 E-value=57 Score=30.81 Aligned_cols=55 Identities=16% Similarity=-0.007 Sum_probs=38.9
Q ss_pred ceEEEecCCccccCCCCCCC------CCCHHHHHHHHHhhcCCCCeEEEECCCCh-hhHHHHh
Q 002979 591 RRAIFLDYDGTVVPETSIIK------SPGPEVISVLKTLCSDPNNTVFIVSGRGR-SSLSEWL 646 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~~~~~------~~s~~~~~~L~~L~~~~g~~v~I~TGR~~-~~l~~~~ 646 (861)
.+++.+|+|+|+-|...... .+-+.....|..| ++.|++.+++|--.. +.+...+
T Consensus 18 P~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dL-k~~GVtl~~ASRt~ap~iA~q~L 79 (144)
T KOG4549|consen 18 PRLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDL-KKLGVTLIHASRTMAPQIASQGL 79 (144)
T ss_pred eEEEEecccccccccccCcccCcceeeeccchhHHHHHH-HhcCcEEEEecCCCCHHHHHHHH
Confidence 47899999999998543211 1347778899999 799999999995443 3444444
No 357
>KOG1050 consensus Trehalose-6-phosphate synthase component TPS1 and related subunits [Carbohydrate transport and metabolism]
Probab=31.65 E-value=6.8 Score=48.03 Aligned_cols=50 Identities=18% Similarity=0.135 Sum_probs=32.4
Q ss_pred eEEEEecC-CCCHHHHHHHHHHHhhcCC--CCCCeEEEEeCCcchHHHHHHcc
Q 002979 747 HIVEVKPQ-GVSKGLVAEKVLVRMFNGG--RPPDFVMCVGDDRSDEDMFESIL 796 (861)
Q Consensus 747 ~~vEI~p~-gvsKg~al~~ll~~l~~~g--i~~d~vlaiGD~~ND~~Mf~~ag 796 (861)
...|+.|. .+.||.++..+...+...+ ...=-..++||+..|++-+..++
T Consensus 371 ~Vaev~~v~s~rdGmnl~~~e~i~~~~~~~~~lVlsef~G~~~tl~d~aivvn 423 (732)
T KOG1050|consen 371 KVAEVCPVTSWRDGMNLVFLEYILCQENKKSVLVLSEFIGDDTTLEDAAIVVN 423 (732)
T ss_pred HhhhheeecccccccchhhhHHHHhhcccCCceEEeeeccccccccccCEEEC
Confidence 44566665 6778888888777663333 12224568899998877666554
No 358
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=30.95 E-value=99 Score=30.38 Aligned_cols=40 Identities=10% Similarity=-0.003 Sum_probs=31.5
Q ss_pred CHHHHHHHHHHHhhcCCCCCCeEEEEeCCcchHHHHHHcccc
Q 002979 757 SKGLVAEKVLVRMFNGGRPPDFVMCVGDDRSDEDMFESILST 798 (861)
Q Consensus 757 sKg~al~~ll~~l~~~gi~~d~vlaiGD~~ND~~Mf~~ag~~ 798 (861)
=|...++.+.+.+.. ....++++|||..+|..+.+.+|..
T Consensus 102 ~K~~~l~~i~~~~~~--~~~~f~~~~gn~~~D~~~y~~~gi~ 141 (157)
T smart00775 102 FKIACLRDIKSLFPP--QGNPFYAGFGNRITDVISYSAVGIP 141 (157)
T ss_pred HHHHHHHHHHHhcCC--CCCCEEEEeCCCchhHHHHHHcCCC
Confidence 477888888876521 2356788899999999999999974
No 359
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=29.68 E-value=3.7e+02 Score=29.00 Aligned_cols=51 Identities=25% Similarity=0.389 Sum_probs=35.0
Q ss_pred CEEEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCCchHHHHHHhhcCCEEeecChHhHH
Q 002979 200 DCVWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYAR 267 (861)
Q Consensus 200 D~VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~ 267 (861)
|+|.--...-.++..+|++++-..++.--+| |. ||.+ ..|+|-.--+|+.+
T Consensus 72 dl~I~aGrrta~l~~~lkk~~~~~~vVqI~~---Pr------lp~~--------~fDlvivp~HD~~~ 122 (329)
T COG3660 72 DLIITAGRRTAPLAFYLKKKFGGIKVVQIQD---PR------LPYN--------HFDLVIVPYHDWRE 122 (329)
T ss_pred ceEEecccchhHHHHHHHHhcCCceEEEeeC---CC------CCcc--------cceEEeccchhhhh
Confidence 7888888899999999999988755555444 43 3322 35777655555554
No 360
>KOG2670 consensus Enolase [Carbohydrate transport and metabolism]
Probab=28.85 E-value=52 Score=35.89 Aligned_cols=41 Identities=29% Similarity=0.497 Sum_probs=31.7
Q ss_pred eCChHHHHHHHhhccccccccccccCCCCCCCCCCccChHhHHHHHHHHHH
Q 002979 136 FLPHDLQKKFYLGFCKQHLWPLFHYMLPMCPDHGDRFDRVLWQAYVSANKI 186 (861)
Q Consensus 136 ~l~~~~~~~~y~gf~~~~lwpl~H~~~~~~~~~~~~~~~~~w~~Y~~vN~~ 186 (861)
|++.+.+-..|+.|+|.. |+ +.+. ..|++++|++|..++..
T Consensus 272 ~~s~~~L~dlY~~~~k~y--Pi--vSiE------DPFdqdDw~~w~~~~~~ 312 (433)
T KOG2670|consen 272 WLSGDQLADLYKSFIKDY--PI--VSIE------DPFDQDDWEAWSKFFKE 312 (433)
T ss_pred ccCHHHHHHHHHHHHhcC--Ce--eeec------CCcchhhHHHHHHHhhc
Confidence 689999999999999984 55 2221 36999999999877654
No 361
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=27.87 E-value=4.6e+02 Score=29.23 Aligned_cols=232 Identities=17% Similarity=0.165 Sum_probs=95.2
Q ss_pred EEEeCcccccHHHHHHhhcCCCeEEEEEecCCCChHHHhcCC----chHHHHHHhhcCCEEeecChHhHHHHHHHHHHHh
Q 002979 202 VWVHDYHLMVLPTFLRKRFNRIKLGFFLHSPFPSSEIYRTLP----VRDEILRGLLNCDLIGFHTFDYARHFLSCCSRML 277 (861)
Q Consensus 202 VwvhDyhl~llp~~lr~~~~~~~i~~flH~PfP~~e~f~~lp----~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~l 277 (861)
+||.|.++..+-.+. ..++.++.+.||-- |--.+....+ .+....+....+|.+-..+....+ .+..+ .
T Consensus 81 ~~i~~~~~~~~~~~~--~~~~~~~i~lwHG~-~~K~~g~~~~~~~~~~~~~~~~~~~~d~~~~~s~~~~~-~~~~~---f 153 (369)
T PF04464_consen 81 YIISDSYFPDLIYFK--KRKNQKYIQLWHGI-PLKKIGYDSPDNKNYRKNYKRNYRNYDYFIVSSEFEKE-IFKKA---F 153 (369)
T ss_dssp EEEESS---T--TS-----TTSEEEE--SS---SB--GGG-S---TS-HHHHHHHTT-SEEEESSHHHHH-HHHHH---T
T ss_pred EEEECCCCCcccccc--cCCCcEEEEecCCC-cccccchhccccccchhhhhhhccCCcEEEECCHHHHH-HHHHH---h
Confidence 777775544322221 12568999999965 5444333222 123667777888977766654444 44322 2
Q ss_pred CCccccCCCeeeEEecCeEEEEEEecccCCchHHHHhhCCchhHHHHHHHHHHc---CCCeEEEeecCcccccCH-----
Q 002979 278 GLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLESVLNLPATATKIKEIEKQF---DGKKLILGIDDMDIFKGI----- 349 (861)
Q Consensus 278 g~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~~~~~~~~~~~~~~~l~~~~---~~~~vil~Vdrld~~KGi----- 349 (861)
+... . +++..|. +++.......... .+.+++.+ .++++||+.=.......-
T Consensus 154 ~~~~-------------~----~i~~~G~--PR~D~l~~~~~~~--~~~i~~~~~~~~~~k~ILyaPT~R~~~~~~~~~~ 212 (369)
T PF04464_consen 154 GYPE-------------D----KILVTGY--PRNDYLFNKSKEN--RNRIKKKLGIDKDKKVILYAPTWRDNSSNEYFKF 212 (369)
T ss_dssp T--G-------------G----GEEES----GGGHHHHHSTT-H--HHHHHHHTT--SS-EEEEEE----GGG--GGSS-
T ss_pred ccCc-------------c----eEEEeCC--CeEhHHhccCHHH--HHHHHHHhccCCCCcEEEEeeccccccccccccc
Confidence 2211 0 1223443 2333332222211 45566555 678899998543322222
Q ss_pred HHHHHHHHHHH-HhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHH
Q 002979 350 SLKLLAMEQLL-QQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 350 ~~~l~Af~~ll-~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly 428 (861)
.....-+++|. ...+++ +|+.-. .|. .+...... ......++.+.. ..++..++
T Consensus 213 ~~~~~~~~~l~~~~~~~~----~li~k~------Hp~---~~~~~~~~---------~~~~~~i~~~~~---~~~~~~ll 267 (369)
T PF04464_consen 213 FFSDLDFEKLNFLLKNNY----VLIIKP------HPN---MKKKFKDF---------KEDNSNIIFVSD---NEDIYDLL 267 (369)
T ss_dssp ---TT-HHHHHHHHTTTE----EEEE--------SHH---HHTT-------------TT-TTTEEE-TT----S-HHHHH
T ss_pred cccccCHHHHHHHhCCCc----EEEEEe------Cch---hhhchhhh---------hccCCcEEECCC---CCCHHHHH
Confidence 11111223331 223343 344322 121 11111110 011123444443 33799999
Q ss_pred Hhcccce--ecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEe--ccC------CCCcccCC---CceEeC
Q 002979 429 AVAECCI--VNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVV--SEF------IGCSPSLS---GAIRVN 495 (861)
Q Consensus 429 ~~ADv~v--vtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~--Se~------~G~~~~l~---~ai~vn 495 (861)
..||++| .+| +..||+.++.| +|. -+. .|....+. .|-.+
T Consensus 268 ~~aDiLITDySS-------i~fD~~~l~KP-------------------iify~~D~~~Y~~~rg~~~~~~~~~pg~~~- 320 (369)
T PF04464_consen 268 AAADILITDYSS-------IIFDFLLLNKP-------------------IIFYQPDLEEYEKERGFYFDYEEDLPGPIV- 320 (369)
T ss_dssp HT-SEEEESS-T-------HHHHHGGGT---------------------EEEE-TTTTTTTTTSSBSS-TTTSSSS-EE-
T ss_pred HhcCEEEEechh-------HHHHHHHhCCC-------------------EEEEeccHHHHhhccCCCCchHhhCCCcee-
Confidence 9999977 344 88999998443 332 111 23322221 12233
Q ss_pred CCCHHHHHHHHHHHhcCCH
Q 002979 496 PWDIDAVADAMTLAINMRD 514 (861)
Q Consensus 496 P~d~~~~A~ai~~aL~m~~ 514 (861)
.+.+++.++|..++..+.
T Consensus 321 -~~~~eL~~~i~~~~~~~~ 338 (369)
T PF04464_consen 321 -YNFEELIEAIENIIENPD 338 (369)
T ss_dssp -SSHHHHHHHHTTHHHHHH
T ss_pred -CCHHHHHHHHHhhhhCCH
Confidence 578999999999886443
No 362
>TIGR02093 P_ylase glycogen/starch/alpha-glucan phosphorylases. This family consists of phosphorylases. Members use phosphate to break alpha 1,4 linkages between pairs of glucose residues at the end of long glucose polymers, releasing alpha-D-glucose 1-phosphate. The nomenclature convention is to preface the name according to the natural substrate, as in glycogen phosphorylase, starch phosphorylase, maltodextrin phosphorylase, etc. Name differences among these substrates reflect differences in patterns of branching with alpha 1,6 linkages. Members include allosterically regulated and unregulated forms. A related family, TIGR02094, contains examples known to act well on particularly small alpha 1,4 glucans, as may be found after import from exogenous sources.
Probab=27.62 E-value=5.8e+02 Score=31.95 Aligned_cols=136 Identities=12% Similarity=0.011 Sum_probs=84.0
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002979 333 GKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~Af~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
+...++.+-|+..-|--.+ .|.-++++.+ ..|+.. ..+++|..|-.+-++ ..-.++-+.|.++++.||..=.-.+
T Consensus 526 ~slfdvq~KR~heYKRq~LNil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~iN~Dp~v~~ 604 (794)
T TIGR02093 526 NSIFDVQVKRLHEYKRQLLNVLHVIYLYNRIKEDPPKDIVPRTVIFGGKAAPGY-HMAKLIIKLINSVAEVVNNDPAVGD 604 (794)
T ss_pred cccchhhheechhhhHHHHHHhhhHHHHHHHHhCCCcCCCCeEEEEEecCCCCc-HHHHHHHHHHHHHHHHhccChhhCC
Confidence 3456788999998887776 6666555533 456541 245666666544333 2335677888888999887533334
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC
Q 002979 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (861)
Q Consensus 409 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (861)
.-.|+++. ...-.--..++.+||+-.-+|+ .++|| |++++-+ -++ .|+|-+|..-|+-.++
T Consensus 605 ~lkVVFle-nY~VslAe~iipaaDvseqist------ag~EA--SGTsnMK--~al--------NGaltlgtlDGanvEi 665 (794)
T TIGR02093 605 KLKVVFVP-NYNVSLAELIIPAADLSEQIST------AGKEA--SGTGNMK--FML--------NGALTIGTLDGANVEI 665 (794)
T ss_pred ceeEEEeC-CCChHHHHHhhhhhhhhhhCCC------CCccc--cCcchhH--HHh--------cCcceeecccchhHHH
Confidence 44576665 4445555578999999877775 56664 4443221 111 4677777777766554
No 363
>PRK00748 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase; Validated
Probab=27.27 E-value=1.4e+02 Score=31.16 Aligned_cols=62 Identities=15% Similarity=0.227 Sum_probs=42.3
Q ss_pred CCHHHHHHHHHhcc-ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC-CChhhHHHHh
Q 002979 577 LSIDHIVSAYRKTE-RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG-RGRSSLSEWL 646 (861)
Q Consensus 577 l~~~~~~~~y~~s~-~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG-R~~~~l~~~~ 646 (861)
-+...+++.|.... ..+.++|+||++-.. ....+.++++++..+.+|.+.-| |+.+.++.++
T Consensus 30 ~~~~~~a~~~~~~g~~~i~v~dld~~~~g~--------~~~~~~i~~i~~~~~~pv~~~GGI~~~ed~~~~~ 93 (233)
T PRK00748 30 DDPVAQAKAWEDQGAKWLHLVDLDGAKAGK--------PVNLELIEAIVKAVDIPVQVGGGIRSLETVEALL 93 (233)
T ss_pred CCHHHHHHHHHHcCCCEEEEEeCCccccCC--------cccHHHHHHHHHHCCCCEEEcCCcCCHHHHHHHH
Confidence 36788899998865 579999999998651 22344555444344566666444 6778888877
No 364
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=26.67 E-value=1.5e+02 Score=29.63 Aligned_cols=43 Identities=19% Similarity=0.077 Sum_probs=30.7
Q ss_pred CCCHHHHHHHHHHHhhcC--CCCCCeEEEEeCC-cchHHHHHHccc
Q 002979 755 GVSKGLVAEKVLVRMFNG--GRPPDFVMCVGDD-RSDEDMFESILS 797 (861)
Q Consensus 755 gvsKg~al~~ll~~l~~~--gi~~d~vlaiGD~-~ND~~Mf~~ag~ 797 (861)
..-|..+.+.+++++... ...++++++|||- .+|+-|-...|.
T Consensus 113 ~~kKP~~~~~i~~~~~~~~~~~~p~eiavIGDrl~TDVl~gN~~G~ 158 (168)
T PF09419_consen 113 RAKKPGCFREILKYFKCQKVVTSPSEIAVIGDRLFTDVLMGNRMGS 158 (168)
T ss_pred CCCCCccHHHHHHHHhhccCCCCchhEEEEcchHHHHHHHhhccCc
Confidence 344666667777776221 1358999999998 499998888875
No 365
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=26.49 E-value=50 Score=33.31 Aligned_cols=36 Identities=8% Similarity=0.087 Sum_probs=23.9
Q ss_pred CCHHHHHHHHHhhcCCCCeEEEECCCChhhHHHHhcc
Q 002979 612 PGPEVISVLKTLCSDPNNTVFIVSGRGRSSLSEWLAP 648 (861)
Q Consensus 612 ~s~~~~~~L~~L~~~~g~~v~I~TGR~~~~l~~~~~~ 648 (861)
+.|..++.++.. +++++.|+++||-.-..+..++.+
T Consensus 74 Idp~fKef~e~i-ke~di~fiVvSsGm~~fI~~lfe~ 109 (220)
T COG4359 74 IDPGFKEFVEWI-KEHDIPFIVVSSGMDPFIYPLFEG 109 (220)
T ss_pred cCccHHHHHHHH-HHcCCCEEEEeCCCchHHHHHHHh
Confidence 445566666654 677777777777777777776643
No 366
>PRK14985 maltodextrin phosphorylase; Provisional
Probab=25.07 E-value=4.3e+02 Score=33.06 Aligned_cols=136 Identities=15% Similarity=0.035 Sum_probs=83.5
Q ss_pred CCeEEEeecCcccccCHHH-HHHHHHHHHH--hCCCCC-CcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCC
Q 002979 333 GKKLILGIDDMDIFKGISL-KLLAMEQLLQ--QHPGMR-GKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPN 408 (861)
Q Consensus 333 ~~~vil~Vdrld~~KGi~~-~l~Af~~ll~--~~P~~~-~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~ 408 (861)
+-..++.+-|+..-|--.+ .|.-.+++++ .+|+.. ..+++|..|-..-++ ..-.++-+.|.++++.||..=.-.+
T Consensus 528 ~slfdvq~kR~heYKRq~Lnil~ii~~y~~i~~~p~~~~~P~~~IFaGKAaP~y-~~aK~iIklI~~va~~in~Dp~v~~ 606 (798)
T PRK14985 528 QAIFDVQIKRLHEYKRQHLNLLHILALYKEIRENPQADRVPRVFLFGAKAAPGY-YLAKNIIFAINKVAEVINNDPLVGD 606 (798)
T ss_pred hhcchhhHhhhhhhhhhhhHhhhhHHHHHHHHhCCCcCCCCeEEEEeecCCCCc-HHHHHHHHHHHHHHHHhcCChhhCC
Confidence 3456778999998887766 6666555433 456532 346676666544333 2235667788888999986533334
Q ss_pred cccEEEEcCCCCHHHHHHHHHhcccceecccccCCCCcceeeeeeecCCCcccccccCCCCCCCCceEEeccCCCCcccC
Q 002979 409 YEPVVLIDRPVPRFEKSAYYAVAECCIVNAVRDGMNLVPYKYIVCRQGTPIMDEALGRERDSPHTSMLVVSEFIGCSPSL 488 (861)
Q Consensus 409 ~~pvv~~~~~v~~~el~aly~~ADv~vvtS~~EG~nLv~~Ea~ac~~~~~~~~~~~~~~~~~~~~g~lV~Se~~G~~~~l 488 (861)
.-.|+|+. ...-.--..++.+|||..-+|. .++|| |++++-+ -++ .|+|-+|..-|+-.++
T Consensus 607 ~lkVVFle-nY~VslAe~lipaaDvseqis~------ag~EA--SGTsnMK--~am--------NGaLtlgtlDGanvEi 667 (798)
T PRK14985 607 KLKVVFLP-DYCVSAAELLIPAADISEQIST------AGKEA--SGTGNMK--LAL--------NGALTVGTLDGANVEI 667 (798)
T ss_pred ceeEEEeC-CCChHHHHHHhhhhhhhhhCCC------CCccc--cCcchhH--HHh--------cCceeeecccchHHHH
Confidence 44566665 4455555578999999877775 56664 4443211 111 4777787777765444
No 367
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=24.50 E-value=4.5e+02 Score=31.75 Aligned_cols=85 Identities=16% Similarity=0.212 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCccc-EEEEcCCCCHHHHHHHH
Q 002979 350 SLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEP-VVLIDRPVPRFEKSAYY 428 (861)
Q Consensus 350 ~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~p-vv~~~~~v~~~el~aly 428 (861)
+..|..+.++|++-|+-+ |+...-|.-++ +..+..+++ .|.+| .|.|..-...+|=..-+
T Consensus 773 P~~l~~W~~ILk~VPnS~----LwllrfPa~ge----~rf~ty~~~-----------~Gl~p~riifs~va~k~eHvrr~ 833 (966)
T KOG4626|consen 773 PSTLQMWANILKRVPNSV----LWLLRFPAVGE----QRFRTYAEQ-----------LGLEPDRIIFSPVAAKEEHVRRG 833 (966)
T ss_pred HHHHHHHHHHHHhCCcce----eEEEeccccch----HHHHHHHHH-----------hCCCccceeeccccchHHHHHhh
Confidence 577899999999999876 88787777554 233333332 23334 23344344567778889
Q ss_pred HhcccceecccccCCCCcceeeeeee
Q 002979 429 AVAECCIVNAVRDGMNLVPYKYIVCR 454 (861)
Q Consensus 429 ~~ADv~vvtS~~EG~nLv~~Ea~ac~ 454 (861)
+.||||+-|++.-|-- +-.|-+..+
T Consensus 834 ~LaDv~LDTplcnGhT-Tg~dvLw~G 858 (966)
T KOG4626|consen 834 QLADVCLDTPLCNGHT-TGMDVLWAG 858 (966)
T ss_pred hhhhhcccCcCcCCcc-cchhhhccC
Confidence 9999999999987753 334555553
No 368
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=24.49 E-value=8.2e+02 Score=25.53 Aligned_cols=155 Identities=17% Similarity=0.247 Sum_probs=89.9
Q ss_pred CCChHHHhcCCchHHHHHHhhcCCEEeecChHhHHHHHHHHHHHhCCccccCCCeeeEEecCeEEEEEEecccCCchHHH
Q 002979 233 FPSSEIYRTLPVRDEILRGLLNCDLIGFHTFDYARHFLSCCSRMLGLDYESKRGHIGLDYFGRTVYIKILPVGVHMGRLE 312 (861)
Q Consensus 233 fP~~e~f~~lp~r~~il~~ll~~dligF~t~~~~~~Fl~~~~r~lg~~~~~~~~~~~~~~~gr~~~i~v~p~GId~~~~~ 312 (861)
||..++||.+.. ..|++-|-.-|-|-|.|+--+-|=|. ..|+--+ -...+.++| |++.+.+.
T Consensus 33 fpDydvfrAfTS-~kIIkkLK~rdgi~~dTP~~aL~klk------------~~gy~ev----iiQ~lhiIp-G~EyEklv 94 (265)
T COG4822 33 FPDYDVFRAFTS-RKIIKKLKERDGIDFDTPIQALNKLK------------DQGYEEV----IIQPLHIIP-GIEYEKLV 94 (265)
T ss_pred CccHHHHHHHhH-HHHHHHHHhhcCcccCCHHHHHHHHH------------Hccchhe----eeeeeeecC-chHHHHHH
Confidence 889999998854 57888898899999999987766554 1121101 011445555 88877664
Q ss_pred HhhCCchhHHHHHHHHHHc----CCCeEEEeecCcccccCHHHHHHHHHHHHHhCCCCCCcEEEEEEecCCCCChhHHHH
Q 002979 313 SVLNLPATATKIKEIEKQF----DGKKLILGIDDMDIFKGISLKLLAMEQLLQQHPGMRGKVVLVQIVNPARGSGKDVQE 388 (861)
Q Consensus 313 ~~~~~~~~~~~~~~l~~~~----~~~~vil~Vdrld~~KGi~~~l~Af~~ll~~~P~~~~~vvLvqi~~p~r~~~~~~~~ 388 (861)
..++.++..| -|++++-+.+ .-.. +++.+..+.|.++.+=.+|..|-++.. +. .+
T Consensus 95 ---------r~V~~~~~dF~~lkig~PlLy~k~------DYe~---~v~aik~~~ppl~k~e~~vlmgHGt~h--~s-~~ 153 (265)
T COG4822 95 ---------REVNKYSNDFKRLKIGRPLLYYKN------DYEI---CVEAIKDQIPPLNKDEILVLMGHGTDH--HS-NA 153 (265)
T ss_pred ---------HHHHHHhhhhheeecCCceeechh------hHHH---HHHHHHHhcCCcCcCeEEEEEecCCCc--cH-HH
Confidence 2344555555 3455544442 2233 445556678988777677777755422 22 12
Q ss_pred HHHHHHHHHHHHhhccCCCCcccEEE--EcCCCCHHHHHHHHHhccc
Q 002979 389 AKKETYLTAKRINEVYGSPNYEPVVL--IDRPVPRFEKSAYYAVAEC 433 (861)
Q Consensus 389 ~~~~v~~l~~~IN~~~~~~~~~pvv~--~~~~v~~~el~aly~~ADv 433 (861)
.-.-+..... ..+|.||.. ..+....+.+..+++..-+
T Consensus 154 ~YacLd~~~~-------~~~f~~v~v~~ve~yP~~d~vi~~l~~~~~ 193 (265)
T COG4822 154 AYACLDHVLD-------EYGFDNVFVAAVEGYPLVDTVIEYLRKNGI 193 (265)
T ss_pred HHHHHHHHHH-------hcCCCceEEEEecCCCcHHHHHHHHHHcCC
Confidence 2222222221 234555543 4455667788888887765
No 369
>KOG0331 consensus ATP-dependent RNA helicase [RNA processing and modification]
Probab=21.93 E-value=4.3e+02 Score=31.36 Aligned_cols=93 Identities=15% Similarity=0.128 Sum_probs=63.9
Q ss_pred EEeecCcccccCHHHHHHHHHHHHH-hCCCCCCcEEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEE
Q 002979 337 ILGIDDMDIFKGISLKLLAMEQLLQ-QHPGMRGKVVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLI 415 (861)
Q Consensus 337 il~Vdrld~~KGi~~~l~Af~~ll~-~~P~~~~~vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~ 415 (861)
++++.+----|-+..+|-|+..+.+ ++..-+++---++|-.|+ .||..+|++.+.++-...+ ..-+.++
T Consensus 131 ~v~iA~TGSGKTLay~lP~i~~l~~~~~~~~~~~~P~vLVL~PT-------RELA~QV~~~~~~~~~~~~---~~~~cvy 200 (519)
T KOG0331|consen 131 LVGIARTGSGKTLAYLLPAIVHLNNEQGKLSRGDGPIVLVLAPT-------RELAVQVQAEAREFGKSLR---LRSTCVY 200 (519)
T ss_pred eEEEeccCCcchhhhhhHHHHHHHhccccccCCCCCeEEEEcCc-------HHHHHHHHHHHHHHcCCCC---ccEEEEe
Confidence 6788888899999999999999987 344334333233344666 5778888877776644432 2233334
Q ss_pred cCCCCHHHHHHHHHhcccceeccc
Q 002979 416 DRPVPRFEKSAYYAVAECCIVNAV 439 (861)
Q Consensus 416 ~~~v~~~el~aly~~ADv~vvtS~ 439 (861)
.|.--..++..+-+.+||+|-|+-
T Consensus 201 GG~~~~~Q~~~l~~gvdiviaTPG 224 (519)
T KOG0331|consen 201 GGAPKGPQLRDLERGVDVVIATPG 224 (519)
T ss_pred CCCCccHHHHHHhcCCcEEEeCCh
Confidence 444446788999999999999984
No 370
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=21.31 E-value=55 Score=38.65 Aligned_cols=16 Identities=25% Similarity=0.449 Sum_probs=13.6
Q ss_pred ceEEEecCCccccCCC
Q 002979 591 RRAIFLDYDGTVVPET 606 (861)
Q Consensus 591 ~klI~~DlDGTLl~~~ 606 (861)
.+.++||+||||+...
T Consensus 22 ~~~~~FDfDGTLt~~~ 37 (497)
T PLN02177 22 NQTVAADLDGTLLISR 37 (497)
T ss_pred ccEEEEecCCcccCCC
Confidence 5689999999999843
No 371
>PRK14024 phosphoribosyl isomerase A; Provisional
Probab=20.05 E-value=2.2e+02 Score=30.06 Aligned_cols=61 Identities=20% Similarity=0.202 Sum_probs=44.0
Q ss_pred CHHHHHHHHHhcc-ceEEEecCCccccCCCCCCCCCCHHHHHHHHHhhcCCCCeEEEECC-CChhhHHHHhc
Q 002979 578 SIDHIVSAYRKTE-RRAIFLDYDGTVVPETSIIKSPGPEVISVLKTLCSDPNNTVFIVSG-RGRSSLSEWLA 647 (861)
Q Consensus 578 ~~~~~~~~y~~s~-~klI~~DlDGTLl~~~~~~~~~s~~~~~~L~~L~~~~g~~v~I~TG-R~~~~l~~~~~ 647 (861)
+...+++.|.... ..+.++|+||.. . . ..+.+.++++++.-+.++.+--| |+.+.++.++.
T Consensus 33 dp~~~a~~~~~~g~~~l~ivDLd~~~-g-----~---~~n~~~i~~i~~~~~~pv~vgGGirs~edv~~~l~ 95 (241)
T PRK14024 33 SPLDAALAWQRDGAEWIHLVDLDAAF-G-----R---GSNRELLAEVVGKLDVKVELSGGIRDDESLEAALA 95 (241)
T ss_pred CHHHHHHHHHHCCCCEEEEEeccccC-C-----C---CccHHHHHHHHHHcCCCEEEcCCCCCHHHHHHHHH
Confidence 6677889998865 579999999863 2 1 13346666665555677777666 88999999983
No 372
>PRK14057 epimerase; Provisional
Probab=20.02 E-value=6.8e+02 Score=26.84 Aligned_cols=65 Identities=14% Similarity=0.180 Sum_probs=45.7
Q ss_pred EEEEEEecCCCCChhHHHHHHHHHHHHHHHHhhccCCCCcccEEEEcCCCCHHHHHHHHH-hcccceecc
Q 002979 370 VVLVQIVNPARGSGKDVQEAKKETYLTAKRINEVYGSPNYEPVVLIDRPVPRFEKSAYYA-VAECCIVNA 438 (861)
Q Consensus 370 vvLvqi~~p~r~~~~~~~~~~~~v~~l~~~IN~~~~~~~~~pvv~~~~~v~~~el~aly~-~ADv~vvtS 438 (861)
.+||+-.+|..+..+-.++..+.+.++.+.+.. .++.-.+..+|.++.+.+..+.. .||++|.-|
T Consensus 157 ~VLvMtV~PGfgGQ~Fi~~~l~KI~~lr~~~~~----~~~~~~IeVDGGI~~~ti~~l~~aGad~~V~GS 222 (254)
T PRK14057 157 VIQLLAVNPGYGSKMRSSDLHERVAQLLCLLGD----KREGKIIVIDGSLTQDQLPSLIAQGIDRVVSGS 222 (254)
T ss_pred EEEEEEECCCCCchhccHHHHHHHHHHHHHHHh----cCCCceEEEECCCCHHHHHHHHHCCCCEEEECh
Confidence 568888888766555455566666666555543 24444677899999999888776 499998876
Done!